isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
DQ459413	ERCC-00035	+	1114	1	FSM	ERCC-00035A	DQ459413	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00035_+_0_1100
DQ459419	ERCC-00028	+	1120	1	FSM	ERCC-00028A	DQ459419	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00028_+_0_1100
DQ459422	ERCC-00112	+	1120	1	FSM	ERCC-00112A	DQ459422	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00112_+_0_1100
DQ459424	ERCC-00044	+	1149	1	FSM	ERCC-00044A	DQ459424	1149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	0	1149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00044_+_0_1100
DQ459425	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00092_+_0_1100
DQ459429	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21560	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00096_+_0_1100
DQ459430	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15641	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00002_+_0_1000
DQ516731	ERCC-00054	+	256	1	FSM	ERCC-00054A	DQ516731	256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00054_+_0_300
DQ516740	ERCC-00051	+	258	1	FSM	ERCC-00051A	DQ516740	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00051_+_0_300
DQ516742	ERCC-00077	+	258	1	FSM	ERCC-00077A	DQ516742	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATAAA	-33	NA	0	258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00077_+_0_300
DQ516748	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00046_+_0_500
DQ516750	ERCC-00162	+	507	1	FSM	ERCC-00162A	DQ516750	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00162_+_0_500
DQ516752	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2798	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00004_+_0_500
DQ516754	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00074_+_0_500
DQ516759	ERCC-00095	+	513	1	FSM	ERCC-00095A	DQ516759	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00095_+_0_500
DQ516763	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00060_+_0_500
DQ516773	ERCC-00170	+	1007	1	FSM	ERCC-00170A	DQ516773	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00170_+_0_1000
DQ516783	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00042_+_0_1000
DQ516784	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	998	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00003_+_0_1000
DQ516785	ERCC-00053	+	1007	1	FSM	ERCC-00053A	DQ516785	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00053_+_0_1000
DQ516786	ERCC-00062	+	1007	1	FSM	ERCC-00062A	DQ516786	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	0	1007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00062_+_0_1000
DQ516787	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00043_+_0_1000
DQ668359	ERCC-00163	+	527	1	FSM	ERCC-00163A	DQ668359	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00163_+_0_500
DQ668363	ERCC-00165	+	856	1	FSM	ERCC-00165A	DQ668363	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00165_+_0_900
DQ668364	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	535	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00009_+_0_1000
DQ668365	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00108_+_0_1000
DQ668367	ERCC-00116	+	1977	1	FSM	ERCC-00116A	DQ668367	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00116_+_0_2000
DQ839618	ERCC-00157	+	1003	1	FSM	ERCC-00157A	DQ839618	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00157_+_0_1000
DQ854994	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1747	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00171_+_0_500
DQ854995	ERCC-00144	+	521	1	FSM	ERCC-00144A	DQ854995	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00144_+_0_500
DQ855001	ERCC-00034	+	1003	1	FSM	ERCC-00034A	DQ855001	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00034_+_0_1000
DQ855003	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00131_+_0_800
DQ855004	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00022_+_0_700
DQ875386	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00145_+_0_1000
DQ875387	ERCC-00099	+	1344	1	FSM	ERCC-00099A	DQ875387	1344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00099_+_0_1300
DQ883650	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00076_+_0_600
DQ883651	ERCC-00019	+	627	1	FSM	ERCC-00019A	DQ883651	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00019_+_0_600
DQ883652	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00079_+_0_600
DQ883654	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00071_+_0_600
DQ883658	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00160_+_0_700
DQ883663	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00113_+_0_800
DQ883673	ERCC-00078	+	977	1	FSM	ERCC-00078A	DQ883673	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00078_+_0_1000
DQ883685	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00111_+_0_1000
DQ883689	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00025_+_0_2000
EF011063	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	872	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00136_+_0_1000
EF011072	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15011	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_ERCC-00130_+_0_1100
ENSMUST00000000001.5	chr3	-	3262	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_4	42.0652395095998	801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACTTTTATTTGTCTTG	NA	False	NA	-10	True	ATTAAA	-32	NA	108053462	108014595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ENSMUST00000000028.14	chr16	-	2143	20	FSM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	120.274616521947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCTGTGATCTTATT	NA	False	NA	-2	True	AATAAA	-21	NA	18630722	18599196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264_18630460_18630553
ENSMUST00000000028.14-0	chr16	-	2004	20	FSM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	133	6	133	0	multi-exon	FALSE	canonical	0	0	junction_19	120.274616521947	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630589	18599202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264_18630460_18630553
ENSMUST00000000080.8	chr13	+	4225	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	9.7410927974683	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGATTGTTTTT	NA	False	NA	8	True	CATAAA	-18	NA	5911480	5920393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
ENSMUST00000000087.13	chr4	+	3353	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	8.94776508408664	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGTGTCTTTTTAACCAG	NA	False	NA	12	True	AATAAA	-14	NA	120262503	120387381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ENSMUST00000000090.8	chr9	+	645	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	0	0	0	0	multi-exon	FALSE	canonical	3	7868	junction_4	746.021908190369	2202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGGTCTTGTGATGTTGT	377	False	NA	22	True	AATAAA	-22	NA	57428561	57439709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
ENSMUST00000000095.7	chr11	+	2436	7	FSM	ENSMUSG00000000093.7	ENSMUST00000000095.7	3626	7	386	804	386	-804	multi-exon	FALSE	canonical	1	1	junction_1	1.10554159678513	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAGAGCCTCGCGTGGC	9979	False	NA	NA	False	AATAAA	-26	NA	85723762	85731970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_85724328_85725445_85725714_85726620_85726768_85727878_85727956_85728051_85728216_85728669_85729308_85731393
ENSMUST00000000122.7	chr11	-	3446	6	FSM	ENSMUSG00000000120.7	ENSMUST00000000122.7	3446	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	5.88557558782486	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACGATGCCAAGAGAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	95478561	95459643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95461922_95462645_95462807_95465016_95465270_95468799_95469160_95471778_95471921_95478309
ENSMUST00000000129.14	chr17	+	2973	18	FSM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_9	21.9155346145023	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATATCTATAAATATAAT	NA	False	NA	NA	False	NA	NA	NA	64203016	64446458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ENSMUST00000000137.8	chr11	-	3631	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTTGTCTTTTTCT	1336	False	NA	-4	True	AATAAA	-19	NA	20062913	20012303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ENSMUST00000000137.8-0	chr11	-	3354	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	0	277	0	-277	multi-exon	FALSE	canonical	3	719	junction_1	58.8430114796991	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTTTAAAAGATCTG	1336	False	NA	-15	True	AATAAA	-15	NA	20062913	20012580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ENSMUST00000000153.9	chr5	-	3416	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	26.9938264547038	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTTCATGCCTAGCAT	NA	False	NA	NA	False	AATAAA	-27	NA	140816186	140744162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
ENSMUST00000000175.6	chr9	-	1231	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_3	46.783187863448	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATATAATGAAAATACAT	NA	False	NA	NA	False	AATAAA	-3	NA	50515112	50507656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
ENSMUST00000000199.8	chr2	+	4653	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	7.16852530873965	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCTGTGTGAGCCTGGT	NA	False	NA	NA	False	ATTAAA	-22	NA	31135834	31186001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ENSMUST00000000253.6	chr2	+	2840	5	FSM	ENSMUSG00000000247.12	ENSMUST00000000253.6	2840	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.73861278752583	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCAGTGCTGGTACTATC	NA	False	NA	15	True	AATAAA	-16	NA	38240770	38259745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_38241906_38243322_38243526_38244460_38244865_38249909_38250116_38258853
ENSMUST00000000260.13	chr13	+	1580	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	10.0428768288773	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	22	True	AATATA	-16	NA	45660919	45699858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ENSMUST00000000285.9	chr11	-	5208	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	10.9859000541603	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGCTTTTTTTTTTTT	3832	False	NA	NA	False	NA	NA	NA	88951574	88928407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ENSMUST00000000287.9	chr11	-	2097	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	0	0	0	0	multi-exon	FALSE	canonical	3	2404	junction_3	148.297748540638	2595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5201	False	NA	-9	True	AATAAA	-20	NA	88846291	88814845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUST00000000291.9	chr11	+	4590	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	6.55438784326958	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGCATCTGGGTCAT	NA	False	NA	41	True	AATAAA	-32	NA	74721745	74736551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ENSMUST00000000304.14	chr10	+	858	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_4	15.6025638918737	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTCTTCTGTTTTGC	NA	False	NA	20	True	ATTAAA	-27	NA	31189378	31204200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ENSMUST00000000305.7	chr10	-	1308	7	FSM	ENSMUSG00000000296.9	ENSMUST00000000305.7	1308	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	224.403654159196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGGATCTTTTATTTC	NA	False	NA	-3	True	ATTAAA	-17	NA	31321954	31208371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUST00000000312.12	chr8	+	4430	16	FSM	ENSMUSG00000000303.13	ENSMUST00000000312.12	4430	16	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_8	93.5918799896658	2178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5049	False	NA	26	True	ATTAAA	-18	NA	107329982	107396878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037
ENSMUST00000000314.13	chr2	+	6388	16	FSM	ENSMUSG00000000305.13	ENSMUST00000000314.13	6388	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	5.18802038889166	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTCTCCCGACTTGCTT	NA	False	NA	4	True	AATAAA	-16	NA	179084223	179541166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179084472_179086492_179086605_179422046_179422274_179439250_179439422_179484761_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ENSMUST00000000317.13	chr2	+	1620	9	FSM	ENSMUSG00000000308.15	ENSMUST00000000317.13	1620	9	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	17.8881070826401	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	1635	False	NA	32	True	AGTAAA	-20	NA	121189090	121194218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
ENSMUST00000000329.9	chr11	-	2343	14	FSM	ENSMUSG00000000320.11	ENSMUST00000000329.9	3001	14	12	646	0	-646	multi-exon	FALSE	canonical	3	19	junction_6	3.422860840198	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTCACATGTCACAGG	7414	False	NA	-2	True	NA	NA	NA	70146167	70132928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70133391_70133510_70133682_70133802_70133904_70136686_70136809_70137720_70137891_70138085_70138173_70140872_70141083_70142275_70142420_70143223_70143385_70143620_70143725_70143836_70143960_70144072_70144155_70145234_70145437_70145963
ENSMUST00000000335.12	chr16	-	1397	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	0	0	0	0	multi-exon	TRUE	canonical	3	117	junction_5	48.2825020064205	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGGGG	3888	False	NA	NA	False	AAAAAG	-9	NA	18245354	18226293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUST00000000348.15	chr3	-	1594	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_7	31.9274176844918	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGCTGCTGCTTTTTTA	NA	False	NA	0	True	AATAAA	-20	NA	116301857	116282611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
ENSMUST00000000349.11	chr3	+	3301	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_7	26.1091937830336	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	10	True	AATAAA	-19	NA	116306718	116343630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ENSMUST00000000356.10	chr15	+	2135	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	569.007518013212	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513229	100518642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
ENSMUST00000000365.3	chrX	+	783	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	58.4486099064811	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTTTCAGAAAT	NA	False	NA	17	True	AATAAA	-19	NA	37689531	37702303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUST00000000384.8	chr10	-	5047	23	FSM	ENSMUSG00000000374.9	ENSMUST00000000384.8	5047	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	3.08823413662964	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTATTTTTGTATATA	NA	False	NA	3	True	ATTAAA	-19	NA	78080475	78022558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78023929_78024589_78024785_78029192_78029371_78032121_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050650_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
ENSMUST00000000388.15	chr11	+	1858	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_9	41.5204843093617	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	False	NA	15	True	AAAACA	-27	NA	6496886	6546744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUST00000000394.14	chr11	-	2290	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_8	40.423788103394	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTATCTTCCCAGGCT	NA	False	NA	-27	True	AATAAA	-19	NA	6576043	6566422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUST00000000412.3	chrX	-	2704	12	FSM	ENSMUSG00000000402.3	ENSMUST00000000412.3	2704	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	3.09892009982897	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGTTGAAACACTTTGT	NA	False	NA	NA	False	AATAAA	-15	NA	165368716	165306002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_165306968_165310309_165310576_165314967_165315070_165319195_165319277_165321409_165321731_165329416_165329540_165331818_165331954_165335420_165335541_165339965_165340086_165345937_165346031_165351404_165351518_165368451
ENSMUST00000000430.14	chr18	+	3977	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTCTGAGTAGTTGTG	NA	False	NA	16	True	ATTAAA	-27	NA	24338400	24419875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUST00000000430.14-0	chr18	+	3209	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	0	768	0	-760	multi-exon	FALSE	canonical	3	33	junction_1	166.935283534934	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGCATTTTTTAATGA	NA	False	NA	NA	False	AATAAA	-18	NA	24338400	24419107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUST00000000449.9	chr6	+	6230	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	0	0	0	0	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACCTACACAAAGATCCA	NA	False	NA	NA	False	NA	NA	NA	115578862	115599585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUST00000000449.9-0	chr6	+	2293	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	0	3937	0	-3937	multi-exon	FALSE	canonical	2	438	junction_3	36.5396066911353	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTCCTGGCTTTCTTA	NA	False	NA	NA	False	AATAAA	-34	NA	115578862	115595648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUST00000000451.14	chr6	-	3070	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_8	72.4119076878934	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGCAGTTTCTTGT	8144	False	NA	0	True	AATAAA	-43	NA	115653596	115595529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ENSMUST00000000466.13	chr4	-	1673	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	74	141	0	-141	multi-exon	FALSE	canonical	3	453	junction_2	61.6944412539141	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCTCCTGTGTGGTC	NA	False	NA	-21	True	AATAAA	-15	NA	86588223	86574942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ENSMUST00000000500.8	chr15	-	2944	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	4.63381292481928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGAATCTGTGTGTTG	NA	False	NA	NA	False	AAAAAG	-14	NA	79899009	79880074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
ENSMUST00000000500.8-0	chr15	-	2148	7	FSM	ENSMUSG00000000489.8	ENSMUST00000000500.8	2944	7	796	0	796	0	multi-exon	FALSE	canonical	2	5	junction_6	4.63381292481928	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGAATCTGTGTGTTG	NA	False	NA	NA	False	AAAAAG	-14	NA	79898213	79880074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79898136
ENSMUST00000000505.16	chr5	-	2341	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	604	17	0	0	multi-exon	FALSE	canonical	3	1644	junction_12	192.903605514278	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2320	False	NA	-25	True	AATAAA	-15	NA	138170080	138162861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUST00000000543.6	chr15	+	2033	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	31.968096341094	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6241	False	NA	12	True	TATAAA	-21	NA	101122068	101130637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ENSMUST00000000544.12	chr15	+	4418	9	FSM	ENSMUSG00000000532.12	ENSMUST00000000544.12	4418	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	3.66571957465379	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATCCCGTCTGCCTT	NA	False	NA	21	True	ATTAAA	-18	NA	101071947	101111565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101072117_101091812_101092053_101092689_101092939_101096664_101096896_101099858_101100027_101100818_101100976_101102333_101102459_101106960_101107092_101108617
ENSMUST00000000590.16	chr9	+	4380	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_13	85.8483594974439	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTGGAGGTCCGCTGTT	NA	False	NA	15	True	AATAAA	-15	NA	51959414	52000029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ENSMUST00000000594.9	chr11	+	2981	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTTACAGTTGTCAC	7331	False	NA	NA	False	TATAAA	-17	NA	17207593	17219176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUST00000000594.9-0	chr11	+	1050	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	-15	1946	0	606	multi-exon	FALSE	canonical	3	609	junction_3	54.4908249157599	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACGGTTGTATGTCCT	7316	False	NA	22	True	AATAAA	-23	NA	17207578	17217230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUST00000000608.8	chr11	+	1996	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	0	2131	0	-2131	multi-exon	FALSE	canonical	3	325	junction_3	15.195028426722	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGGCTCCTTTTCTTG	NA	False	NA	22	True	AATAAA	-15	NA	54988940	55001724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
ENSMUST00000000619.8	chr7	-	4607	13	FSM	ENSMUSG00000000605.10	ENSMUST00000000619.8	4607	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	13.5592834127275	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	7302532	7285307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690_7301836_7302239
ENSMUST00000000641.15	chr6	-	4086	14	FSM	ENSMUSG00000000627.16	ENSMUST00000000641.15	4086	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	5.49986551745215	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGCGTGGTTATTGT	NA	False	NA	-5	True	NA	NA	NA	82916750	82888865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82896297_82896450_82896543_82896664_82907878_82907973_82912567_82912667_82912875_82912936_82914041_82914194_82916441
ENSMUST00000000642.11	chr6	-	5513	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_14	56.0328005768445	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGTGTGTGATTGGAT	9398	False	NA	-1	True	AATAAA	-23	NA	82751435	82702005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ENSMUST00000000724.15	chr17	+	4653	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	30.0116471047111	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53873998	53979748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ENSMUST00000000727.4	chr10	-	3180	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_5	17.0528589978338	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACTGGACTGTTGTTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	128532133	128513043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
ENSMUST00000000746.12	chr10	+	1676	13	FSM	ENSMUSG00000000730.14	ENSMUST00000000746.12	1676	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	3.51484945149386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTCTGGTGTGGTGTGTG	5591	False	NA	29	True	AATATA	-21	NA	77885675	77899456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77885746_77885849_77886038_77886431_77886519_77886749_77886795_77887664_77887745_77887825_77887939_77888545_77888718_77889762_77889851_77890805_77890901_77892678_77892755_77893101_77893242_77895480_77895567_77899020
ENSMUST00000000756.6	chr8	+	780	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	0	0	0	0	multi-exon	FALSE	canonical	3	17818	junction_5	2681.35350895774	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829088	123831983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ENSMUST00000000759.9	chr8	-	2140	7	FSM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	74.3544439380279	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCAGACTTTTTTTTTT	9745	False	NA	-4	True	AATAAA	-16	NA	123939499	123931002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936954_123936975_123939404
ENSMUST00000000767.6	chr11	-	2942	18	FSM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	554.797565874568	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239136	75191175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75230538_75230602_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUST00000000769.14	chr11	-	1388	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	149	295	0	0	multi-exon	TRUE	canonical	3	25	junction_1	3.91751691451488	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTAGCCTCTGCAATAAA	5527	False	NA	-33	True	NA	NA	NA	75313378	75300889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
ENSMUST00000000776.15	chr8	-	3797	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_11	12.9206544206397	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATGTGGTTTCTGAA	NA	False	NA	1	True	ATTAAA	-18	NA	12722248	12664276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ENSMUST00000000793.13	chr14	-	2016	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	16.2244992218558	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTAAGTGGTTCTGCT	1731	False	NA	-7	True	AATAAA	-17	NA	70680887	70676196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
ENSMUST00000000804.7	chrX	+	4692	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_1	98.1322449554681	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCGTTTGATTGTCCAT	NA	False	NA	18	True	AATAAA	-18	NA	13147208	13160291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUST00000000828.14	chr6	+	2836	16	FSM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_10	10.7467824642231	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTTTTTTTCTGAA	NA	False	NA	91	True	ATTAAA	-13	NA	89620969	89652511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
ENSMUST00000000844.15	chr2	+	2950	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAATTCACTATGCTCC	NA	False	NA	NA	False	NA	NA	NA	181138973	181159164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUST00000000844.15-1	chr2	+	1513	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	2	1435	0	-320	multi-exon	FALSE	canonical	3	318	junction_5	284.174486695919	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGCCAGTACCAGTTA	NA	False	NA	62	True	NA	NA	NA	181138975	181157729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUST00000000894.6	chr2	-	2755	7	FSM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	459.079392794851	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9674	False	NA	-21	True	AATAAA	-16	NA	154411640	154401553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
ENSMUST00000000895.13	chr2	-	1829	13	FSM	ENSMUSG00000027489.16	ENSMUST00000000895.13	1829	13	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_6	10.0840220150494	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCCCCTGTCTCT	7311	False	NA	-15	True	AATAAA	-24	NA	154400786	154386318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
ENSMUST00000000896.11	chr2	-	939	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	20	1830	0	-1830	multi-exon	FALSE	canonical	3	158	junction_1	13.4246870437348	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGGAGTCTGTGGCTTG	NA	False	NA	-3	True	NA	NA	NA	154445608	154429507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ENSMUST00000000904.15	chr16	+	1412	8	FSM	ENSMUSG00000000884.18	ENSMUST00000000904.15	1412	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	116.273604143022	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCAAGGTGGGAACTT	NA	False	NA	17	True	AATAAA	-19	NA	18317533	18383292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUST00000000924.13	chr10	-	2288	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	14.5349683908307	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5056	False	NA	-3	True	ATTAAA	-17	NA	75768336	75759055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ENSMUST00000000925.10	chr10	-	1660	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	283.203990084886	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCAGTAGCATAAAACTG	6861	False	NA	-2	True	AATAAA	-20	NA	75757451	75732602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
ENSMUST00000000939.15	chr5	+	4326	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	63	2346	63	1524	multi-exon	TRUE	canonical	3	34	junction_6	6.64046185222248	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCCTCTGCCAGACTC	NA	False	NA	15	True	AATAAA	-29	NA	124111753	124141275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ENSMUST00000000940.15	chr5	+	2243	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATGTTTAAATATTT	NA	False	NA	NA	False	AATAAA	-12	NA	135398806	135405652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUST00000000940.15-0	chr5	+	1571	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	17	655	0	0	multi-exon	FALSE	canonical	3	253	junction_9	22.1966519552993	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	18	True	AATAAA	-18	NA	135398823	135404997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUST00000000958.9	chr15	-	1903	14	FSM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	11.6872458678823	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTGTCACTGTGAC	NA	False	NA	-7	True	AATAAA	-11	NA	75550649	75528883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
ENSMUST00000000964.6	chr6	-	2251	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTAAGCATCTTGTGTA	NA	False	NA	-6	True	AATAAA	-19	NA	52135297	52132569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52134070_52134546
ENSMUST00000000985.7	chr14	+	2538	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	29.1475598792348	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTTCAGAGTTGAAGCT	NA	False	NA	NA	False	AATAAA	-21	NA	54598297	54607130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUST00000000985.7-0	chr14	+	1502	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	0	1036	0	0	multi-exon	TRUE	canonical	3	499	junction_4	29.1475598792348	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTTGTCTGGG	NA	False	NA	21	True	ATTAAA	-44	NA	54598297	54606094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUST00000001002.8	chr11	+	5614	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_5	6.60059596066985	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTGGTTTCTGGGTCTCT	4017	False	NA	11	True	AATAAA	-20	NA	83644521	83674580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUST00000001002.8-0	chr11	+	3863	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	18	1733	0	0	multi-exon	FALSE	canonical	3	50	junction_5	6.60059596066985	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4035	False	NA	4	True	AATAAA	-23	NA	83644539	83672847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUST00000001036.11	chr9	-	4619	23	FSM	ENSMUSG00000032175.12	ENSMUST00000001036.11	4619	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	22.0371587015287	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGTTGCTTGCATT	NA	False	NA	-3	True	NA	NA	NA	21038642	21015364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035506_21035706_21035855_21036159_21036278_21038419
ENSMUST00000001042.10	chr3	+	2027	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	0	0	0	0	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTACAAGCATTTATTTA	NA	False	NA	18	True	AATAAA	-23	NA	90383453	90395686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUST00000001042.10-0	chr3	+	1601	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	10	416	0	0	multi-exon	FALSE	canonical	3	1252	junction_8	67.3276893371464	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTTTTGGTTTTATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	90383463	90395270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUST00000001043.14	chr3	-	3257	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	0	0	0	0	multi-exon	TRUE	canonical	3	892	junction_3	258.017804618208	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416758	90406262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ENSMUST00000001059.9	chr11	-	6946	22	FSM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	5.67646212197547	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCTTGTTTCTTAAA	9489	False	NA	-1	True	AATAAA	-18	NA	106378622	106285475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ENSMUST00000001063.15	chr11	-	4243	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	113.072029921715	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470511	61408074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
ENSMUST00000001079.15	chr3	-	5128	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTGCAATTTTATT	NA	False	NA	0	True	TATAAA	-22	NA	129854556	129776407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ENSMUST00000001079.15-0	chr3	-	4653	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	50	425	50	259	multi-exon	FALSE	canonical	3	129	junction_20	16.4228159792433	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGGTTTGGTGGTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	129854506	129776832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ENSMUST00000001080.16	chr11	-	2367	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	13.2382022948737	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAGGAATGTTATTC	NA	False	NA	0	True	AATATA	-32	NA	51541669	51533889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ENSMUST00000001081.10	chr11	-	1946	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	13.1581078605222	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	False	NA	-9	True	AATATA	-19	NA	51526723	51514499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUST00000001083.4	chr11	+	825	3	FSM	ENSMUSG00000001056.4	ENSMUST00000001083.4	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	5400	junction_2	19.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGGCAAGTGTGTGG	NA	False	NA	16	True	AGTAAA	-11	NA	51510597	51514256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51510979_51513311_51513418_51513918
ENSMUST00000001092.15	chr8	+	4071	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	4.69148164229596	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGAGTTGTTACTGTT	1634	False	NA	21	True	AGTAAA	-24	NA	123980933	123996484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
ENSMUST00000001109.11	chr5	-	1907	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_12	65.1670929227321	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTTACTATTCTTT	NA	False	NA	0	True	AATAAA	-24	NA	34794533	34790985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ENSMUST00000001115.16	chr13	+	2994	16	FSM	ENSMUSG00000074886.12	ENSMUST00000001115.16	2994	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	121.188264925097	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ENSMUST00000001116.5	chr4	+	7246	2	FSM	ENSMUSG00000001089.15	ENSMUST00000001116.5	7246	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTGAGTCAGTGATGC	NA	False	NA	14	True	AATAAA	-20	NA	136267664	136276629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136270830_136272548
ENSMUST00000001126.4	chr11	+	1978	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	12.7549010188241	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTTTGGGGCTTTCTG	8337	False	NA	26	True	AGTAAA	-27	NA	78356522	78362771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
ENSMUST00000001127.11	chr11	+	2054	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1635	False	NA	18	True	ATTAAA	-15	NA	78403018	78413562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUST00000001127.11-0	chr11	+	1393	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	96	565	96	0	multi-exon	FALSE	canonical	3	1074	junction_9	50.3904752904753	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGGCCATTTTTGTCT	1731	False	NA	15	True	AATAAA	-17	NA	78403114	78412997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUST00000001147.5	chr10	-	4100	35	FSM	ENSMUSG00000001119.8	ENSMUST00000001147.5	4100	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	13.9481553641435	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	8442	False	NA	0	True	AATAAA	-15	NA	76562002	76544625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76548698_76548708_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556840_76556921_76556943_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ENSMUST00000001148.11	chr10	-	2013	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	18.4407760742931	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	1236	False	NA	-3	True	AATAAA	-18	NA	76797622	76597690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ENSMUST00000001155.11	chrX	+	2358	16	FSM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	0	0	0	0	multi-exon	FALSE	non_canonical	1	66	junction_12	87.7031356337959	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6273	False	NA	23	True	NA	NA	NA	20714781	20726758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUST00000001156.8	chrX	-	1636	9	FSM	ENSMUSG00000001128.8	ENSMUST00000001156.8	1636	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	23.4837044564949	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAATATTGTGAAATAT	NA	False	NA	73	True	AATAGA	-13	NA	20797794	20791692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20791999_20793519_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
ENSMUST00000001162.10	chrX	-	636	7	FSM	ENSMUSG00000001134.10	ENSMUST00000001162.10	636	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	225.323039705713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGAATCACATAGTCCTTT	NA	False	NA	-14	True	ATTAAA	-14	NA	20828239	20818167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827873_20828026_20828172
ENSMUST00000001166.14	chr1	+	5193	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCATTGTACTTTTACC	NA	False	NA	NA	False	ATTAAA	-16	NA	36550947	36567318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ENSMUST00000001166.14-0	chr1	+	4168	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	0	1025	0	-1025	multi-exon	FALSE	canonical	3	58	junction_3	12.7918979460135	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATACGGTGTGAAGAC	NA	False	NA	24	True	NA	NA	NA	36550947	36566293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ENSMUST00000001172.12	chr1	-	847	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	214	1048	0	218	multi-exon	FALSE	canonical	3	48	junction_3	11.5566238822398	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCACATGGGCAAAGATA	7014	False	NA	-11	True	AATAAA	-16	NA	36586312	36578222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ENSMUST00000001179.7	chr10	-	9331	42	FSM	ENSMUSG00000001151.11	ENSMUST00000001179.7	9331	42	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_22	55.1118596417389	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTCCTGGCTACAGCC	NA	False	NA	-20	True	AATAAA	-14	NA	76278560	76187100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239457_76239479_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ENSMUST00000001184.10	chr6	-	4666	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	4.44522215417857	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCCTGTGTCCCAT	4023	False	NA	NA	False	AATAAA	-19	NA	86646143	86624023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
ENSMUST00000001185.14	chr6	-	2949	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_7	38.1766371135774	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTGTTTAAAGTGA	NA	False	NA	-18	True	AATAAA	-20	NA	86710365	86668749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ENSMUST00000001186.11	chr6	-	885	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGACTTGTTTTGTTT	7646	False	NA	1	True	ATTAAA	-29	NA	86661504	86652132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ENSMUST00000001186.11-0	chr6	-	816	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	5	64	0	-64	multi-exon	FALSE	canonical	3	1763	junction_5	100.541732628794	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATTTGACAAATATCT	7651	False	NA	-10	True	AATAAA	-22	NA	86661499	86652196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ENSMUST00000001187.15	chr6	-	2002	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8737858950537	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTATTCTTTCTCTGAT	4606	False	NA	-2	True	ATTAAA	-18	NA	86770566	86713822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ENSMUST00000001202.15	chrX	+	5253	24	FSM	ENSMUSG00000001173.16	ENSMUST00000001202.15	5253	24	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	28.8803018275155	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47001263	47054745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47045086_47045111_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ENSMUST00000001226.11	chr15	+	2375	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_17	50.4832700370451	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGTAACTGGCCAAACG	4533	False	NA	83	True	AATAAA	-16	NA	78784102	78796247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ENSMUST00000001240.12	chr10	-	5980	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTCTCTGCCTCTTTTT	NA	False	NA	-3	True	CATAAA	-22	NA	78188276	78105011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ENSMUST00000001240.12-0	chr10	-	1455	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	92	4433	92	0	multi-exon	FALSE	canonical	3	264	junction_9	65.0870262621847	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAAGAGACACTTAGAG	NA	False	NA	-18	True	ATTAAA	-20	NA	78188184	78109444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ENSMUST00000001242.9	chr10	-	1378	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	5.05799696849784	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGTCTCAGGCCTTGTG	4131	False	NA	-2	True	AATAAA	-29	NA	78005616	77997899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ENSMUST00000001256.11	chr17	-	3736	17	FSM	ENSMUSG00000001227.13	ENSMUST00000001256.11	3736	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.37036719067819	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGACTCTGGGTCAGC	8351	False	NA	NA	False	AATAAA	-22	NA	56447343	56430084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56431918_56432332_56432392_56432516_56432595_56433216_56433367_56433449_56433633_56433939_56434090_56434477_56434610_56435249_56435468_56436407_56436497_56436972_56437093_56437705_56437797_56438112_56438215_56438522_56438586_56438742_56438804_56439497_56439622_56439715_56439869_56447213
ENSMUST00000001258.15	chr17	+	3586	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	0	0	0	0	multi-exon	TRUE	canonical	3	1413	junction_6	319.856779473251	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	420	False	NA	36	True	AATAAA	-20	NA	56610320	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000001279.15	chr7	-	1912	10	FSM	ENSMUSG00000001247.17	ENSMUST00000205961.2	2021	10	109	0	109	0	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTAAGCCTCTTGTTT	NA	False	NA	-7	True	AATAAA	-13	NA	30672638	30657203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
ENSMUST00000001280.14	chr7	-	2713	19	FSM	ENSMUSG00000001248.16	ENSMUST00000001280.14	2713	19	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_6	41.078853711152	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5686	False	NA	-1	True	AATAAA	-15	NA	30850507	30829551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
ENSMUST00000001284.13	chr1	+	1738	10	FSM	ENSMUSG00000026641.14	ENSMUST00000001284.13	1115	10	13	-636	0	0	multi-exon	FALSE	canonical	3	42	junction_4	49.4805111903093	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTCTTCCTCCT	6750	False	NA	63	True	GATAAA	-15	NA	171238893	171246325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243368_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUST00000001304.9	chr12	-	1472	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	0	0	0	0	multi-exon	FALSE	canonical	3	7551	junction_6	311.265160273359	5765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638772	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUST00000001319.15	chr8	-	4793	5	FSM	ENSMUSG00000001300.17	ENSMUST00000001319.15	4793	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTTCAAAGTATTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	8711242	8667433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_8670977_8672330_8672445_8673147_8673241_8689205_8689490_8710483
ENSMUST00000001326.7	chr15	+	7754	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	20.1295802241378	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGTTGGGAATGGG	NA	False	NA	30	True	AATAAA	-17	NA	102314814	102344839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ENSMUST00000001327.11	chr15	-	2683	15	FSM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	6.6719791758105	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCCTCTACTTTACT	NA	False	NA	-1	True	AATAAA	-14	NA	102140379	102124429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
ENSMUST00000001339.6	chr1	-	1321	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_3	58.7962583843564	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTTATCTTTTCTATT	NA	False	NA	-30	True	CATAAA	-6	NA	186481555	186453174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ENSMUST00000001347.7	chr11	+	1394	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	23.8051990119806	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	NA	False	NA	21	True	AATAAA	-21	NA	101359000	101362679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ENSMUST00000001402.14	chr9	-	1850	13	FSM	ENSMUSG00000001366.15	ENSMUST00000001402.14	1850	13	0	0	0	0	multi-exon	FALSE	non_canonical	2	18	junction_12	15.7920514464996	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTGTGGATGGCCTT	NA	False	NA	0	True	AATAAA	-28	NA	78016347	77988783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78016283
ENSMUST00000001412.17	chr6	+	3788	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	0	0	0	0	multi-exon	FALSE	canonical	2	105	junction_25	21.3495308879564	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCTTTGAATTCAA	NA	False	NA	NA	False	TATAAA	-22	NA	3498381	3603531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUST00000001415.9	chr18	-	2067	13	FSM	ENSMUSG00000117679.2	ENSMUST00000001415.9	2067	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	18.7888486431003	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGATGAGTATATTGAC	NA	False	NA	-2	True	AATAAA	-19	NA	36812419	36804206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36809676_36809917_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ENSMUST00000001416.8	chr18	-	1989	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	68.8118913334671	799	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGTCCTTGATGC	NA	False	NA	-2	True	AATAAA	-16	NA	36916258	36899580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ENSMUST00000001419.10	chr18	+	2310	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGACTTTTCTTTGAT	6616	False	NA	22	True	AATAAA	-22	NA	36926928	36932719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ENSMUST00000001419.10-0	chr18	+	1265	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	52	993	52	590	multi-exon	FALSE	canonical	3	554	junction_5	81.4331627778266	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCGTTTCTTCTGTTTC	6668	False	NA	29	True	ATTAAA	-26	NA	36926980	36931726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ENSMUST00000001451.11	chr3	+	4448	22	FSM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	44.0686436309756	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243566	88269645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ENSMUST00000001452.14	chr3	+	1977	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_3	121.304155843285	3210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTGTCATGTGTTTTT	3804	False	NA	23	True	ATTAAA	-15	NA	88204422	88229074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUST00000001455.13	chr3	+	5401	11	FSM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_10	33.5177564881661	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTTTGGGTTTTGATT	6538	False	NA	17	True	ATTAAA	-29	NA	88049678	88079393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ENSMUST00000001460.14	chr6	+	3482	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_3	55.1049865830108	1543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGGAGCCAGAACACTG	-7	True	NA	30	True	AATAAA	-31	NA	28480346	28888831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ENSMUST00000001479.5	chr11	-	5894	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	0	0	0	0	multi-exon	TRUE	canonical	3	682	junction_21	133.681077140662	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCTGCTTCGTTCTTT	NA	False	NA	-4	True	AATAAA	-25	NA	97078707	97050539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUST00000001479.5-0	chr11	-	4076	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	0	1818	0	978	multi-exon	FALSE	canonical	3	682	junction_21	133.681077140662	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078707	97052357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUST00000001480.14	chr11	-	4215	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_18	36.1553409289133	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97171464	97096669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ENSMUST00000001484.3	chr11	-	2488	6	FSM	ENSMUSG00000001444.3	ENSMUST00000001484.3	2488	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.26491106406735	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCCCTCCTTCTGTGGCT	NA	False	NA	NA	False	AATAAA	-16	NA	97006157	96988896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96990205_96990595_96990658_96990752_96990912_96992304_96992427_96992769_96992925_97005475
ENSMUST00000001485.10	chr11	+	1708	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	35.8643276808586	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	873	False	NA	10	True	NA	NA	NA	96932385	96940039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ENSMUST00000001507.5	chr5	-	3931	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATTTTCTTTGCCAAT	NA	False	NA	-22	True	ATTAAA	-22	NA	4154746	4131144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUST00000001507.5-0	chr5	-	2637	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	325	969	0	-969	multi-exon	FALSE	canonical	3	648	junction_6	50.6347365275053	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGTACTGGCTGGTCT	NA	False	NA	-2	True	NA	NA	NA	4154421	4132113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUST00000001513.8	chr18	+	1758	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	34.2928563989645	781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGGTCTCTTGAACTTC	NA	False	NA	12	True	AATAAA	-14	NA	67523786	67535819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
ENSMUST00000001520.13	chr8	+	4227	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGAGTTTTGCCT	7495	False	NA	16	True	TTTAAA	-20	NA	124204641	124230655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUST00000001520.13-0	chr8	+	2492	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	0	1735	0	566	multi-exon	FALSE	canonical	3	631	junction_4	44.0414843499853	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCTCAGATAAGACCATG	7495	False	NA	19	True	ATTAAA	-22	NA	124204641	124228920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUST00000001522.10	chr8	+	3214	13	FSM	ENSMUSG00000001482.16	ENSMUST00000001522.10	3214	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.6160278278567	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169724	124190009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124169791_124172836_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUST00000001544.12	chr9	+	4157	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_6	2.97449918967259	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAAACTTTGTTTTAGT	NA	False	NA	NA	False	NA	NA	NA	38629563	38654633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ENSMUST00000001548.14	chr11	-	4861	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	7.12179752590594	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTGCTCCTACCT	8872	False	NA	0	True	AATAAA	-22	NA	94967540	94935299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ENSMUST00000001559.11	chr6	-	2320	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_3	19.6628609101919	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401894	128386406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ENSMUST00000001562.9	chr6	-	3374	11	FSM	ENSMUSG00000001521.13	ENSMUST00000001562.9	3374	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	4.7169905660283	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGCTTTCCCAGAATACC	7491	False	NA	-20	True	AATAAA	-18	NA	128332814	128298123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
ENSMUST00000001565.15	chr17	-	1679	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_8	17.8418429806661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCGGCTTCAGACGTCTG	NA	False	NA	-1	True	AATAAA	-17	NA	35984631	35978621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ENSMUST00000001566.10	chr17	-	2649	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	0	0	0	0	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	3906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGAGGCTGTGTGCTC	NA	False	NA	-7	True	AATAAA	-16	NA	36149198	36144812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ENSMUST00000001566.10-0	chr17	-	1673	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	89	887	0	797	multi-exon	FALSE	canonical	3	8733	junction_1	667.796376150695	8338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTCTCCTTTCTCTTTC	NA	False	NA	-35	True	NA	NA	NA	36149109	36145699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ENSMUST00000001569.15	chr17	+	1825	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	11.7434970184448	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATACTTCTTTCCTCACT	NA	False	NA	25	True	ATTAAA	-23	NA	36134121	36143683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ENSMUST00000001583.8	chr13	+	4382	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_2	37.9194448472108	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATAATTTTGACGTGTA	5452	False	NA	NA	False	AATAAA	-29	NA	75854875	75920483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ENSMUST00000001592.15	chr11	-	3205	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_13	65.0294425807792	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTTAAAAGCATT	NA	False	NA	-17	True	AATAAA	-18	NA	100288575	100261444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ENSMUST00000001595.10	chr11	+	2584	10	FSM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.35959467611297	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCCAGAAGTGGACAGA	NA	False	NA	13	True	AATAAA	-14	NA	100306522	100315650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ENSMUST00000001608.8	chr5	-	2018	3	FSM	ENSMUSG00000001566.10	ENSMUST00000001608.8	2018	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTTTACTAGATGA	NA	False	NA	NA	False	AATAAA	-1	NA	29683468	29678258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_29679230_29679753_29679910_29682577
ENSMUST00000001611.11	chr5	+	2852	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	0	6367	0	5121	multi-exon	FALSE	canonical	3	157	junction_8	15.8962259671911	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGTGGCACGTGTCT	2959	False	NA	5	True	TTTAAA	-7	NA	29639661	29656474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ENSMUST00000001631.7	chr11	-	2482	22	FSM	ENSMUSG00000001588.13	ENSMUST00000001631.7	2482	22	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_20	9.40183800238705	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	9573	False	NA	-6	True	ATTAAA	-15	NA	69786365	69772392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824_69781009_69781259_69781319_69781414_69781469_69781689_69781810_69785425_69785484_69786111
ENSMUST00000001652.7	chr12	+	3792	3	FSM	ENSMUSG00000021070.7	ENSMUST00000001652.7	3792	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGTTTCCCTGTGTCA	NA	False	NA	NA	False	AATAAA	-14	NA	105529484	105561496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105529508_105554455_105554560_105557831
ENSMUST00000001672.12	chr12	-	3378	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGGGAGGTTTGCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	40273188	40251565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ENSMUST00000001672.12-0	chr12	-	1810	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	4	1564	0	0	multi-exon	FALSE	canonical	3	551	junction_11	48.4295518005619	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	False	NA	-3	True	AATAAA	-21	NA	40273184	40253129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ENSMUST00000001675.14	chr6	+	4550	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTGGGGTGTTTGTTTT	NA	False	NA	15	True	AATAAA	-20	NA	146626492	146680310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ENSMUST00000001675.14-0	chr6	+	2294	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	0	2256	0	0	multi-exon	FALSE	canonical	3	136	junction_10	10.7620855417108	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	False	NA	11	True	ATTAAA	-21	NA	146626492	146678054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ENSMUST00000001700.7	chr15	+	2461	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGCTTGGGATCCTT	NA	False	NA	17	True	AATAAA	-25	NA	102829537	102837249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102830353_102835603
ENSMUST00000001712.8	chr10	-	7417	37	FSM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_35	14.4571258434836	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75600150	75481945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ENSMUST00000001715.10	chr10	-	1880	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	2.34520787991171	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGCTTCTGGATCCT	NA	False	NA	5	True	AATAAA	-23	NA	75617248	75609948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
ENSMUST00000001716.8	chr10	-	649	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_2	12	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGACTTCTTTGCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	75609248	75607066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75607341_75608571_75608748_75609049
ENSMUST00000001724.12	chr1	-	2258	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_12	122.318232492135	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTATACCTTTCCCT	NA	False	NA	-16	True	CATAAA	-23	NA	121495718	121481563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ENSMUST00000001757.9	chr13	-	1014	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	48	1491	0	-1491	multi-exon	FALSE	canonical	3	1400	junction_3	42.6640624205223	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAACTTTTGTTTGT	NA	False	NA	-10	True	AGTAAA	-10	NA	38842986	38829673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
ENSMUST00000001780.10	chr12	-	2690	14	FSM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_13	42.5045768506691	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGCTTTCTGGTGTGG	NA	False	NA	0	True	AATAAA	-19	NA	112640710	112620254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ENSMUST00000001801.11	chr19	-	2688	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	8.58007741992203	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	3957133	3946049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ENSMUST00000001802.10	chr11	+	2560	6	FSM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1.93907194296653	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGGACGTTGCTGGCAT	NA	False	NA	23	True	AATAAA	-33	NA	100960837	100968498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
ENSMUST00000001806.10	chr11	+	2138	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	26.2908705931015	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3511	False	NA	25	True	ATTAAA	-16	NA	100973390	100977445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUST00000001809.15	chr15	-	2817	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	0	0	0	0	multi-exon	FALSE	canonical	3	5069	junction_10	538.55476006794	8972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	377	False	NA	-7	True	AATAAA	-16	NA	36609217	36595904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUST00000001812.5	chr6	+	3779	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	9.38347413151758	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTTTCTTTTCCCCAG	19	False	NA	NA	False	NA	NA	NA	29735692	29761364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ENSMUST00000001818.5	chr2	-	3428	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCACAGTGATTGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	145776934	145759398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ENSMUST00000001818.5-0	chr2	-	2348	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	300	780	0	-780	multi-exon	FALSE	canonical	3	204	junction_8	24.6650940380394	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTACTTGAGTCCGA	NA	False	NA	-14	True	AGTAAA	-16	NA	145776634	145760178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ENSMUST00000001825.9	chr9	+	5789	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTTAAGAGTCTGTGG	8365	False	NA	NA	False	ATTAAA	-22	NA	18203420	18228738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUST00000001825.9-0	chr9	+	2173	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	175	3441	0	1988	multi-exon	FALSE	canonical	3	795	junction_1	72.6983493622792	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8540	False	NA	12	True	NA	NA	NA	18203595	18225297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUST00000001834.4	chr10	-	2009	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	0	0	0	0	multi-exon	FALSE	canonical	3	1317	junction_1	96.7988457003782	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793687	85774500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ENSMUST00000001836.11	chr10	+	2572	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	18.5957258639765	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCACCTCACTTTGACT	NA	False	NA	8	True	AATAAA	-19	NA	85707694	85724960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ENSMUST00000001845.13	chr7	-	1600	12	FSM	ENSMUSG00000001794.14	ENSMUST00000001845.13	1600	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	486.143841584714	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTAACTTGGTTATTTT	8309	False	NA	-8	True	NA	NA	NA	29898236	29886366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
ENSMUST00000001872.5	chr2	+	2483	2	FSM	ENSMUSG00000001819.5	ENSMUST00000001872.5	2483	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTATTTGACATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	74498653	74501943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_74499423_74500229
ENSMUST00000001884.14	chr7	+	4627	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTGAGTGTGTCT	NA	False	NA	NA	False	NA	NA	NA	101312839	101439375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUST00000001884.14-0	chr7	+	2145	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	124	2358	0	0	multi-exon	FALSE	canonical	3	662	junction_8	67.7342519622745	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCCACCTTGCCCTCAT	NA	False	NA	18	True	AATAAA	-24	NA	101312963	101437017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUST00000001900.9	chr5	-	1364	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_7	40.248209492435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTCTCATCATTG	5269	False	NA	-13	True	AATACA	-26	NA	143315011	143302243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUST00000001920.13	chr2	+	3117	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGTCTTTGTGTTTCTT	NA	False	NA	4	True	AATAAA	-14	NA	31840150	31863454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ENSMUST00000001920.13-0	chr2	+	1379	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	135	1603	0	501	multi-exon	FALSE	canonical	3	20	junction_2	6.46838465151849	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTCCATGTGTGCT	NA	False	NA	14	True	NA	NA	NA	31840285	31861851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ENSMUST00000001927.12	chr17	+	6671	34	FSM	ENSMUSG00000001870.17	ENSMUST00000001927.12	6671	34	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_21	5.00871600276228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAACCTGTCTATGAT	NA	False	NA	NA	False	NA	NA	NA	75312562	75698762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ENSMUST00000001950.12	chr7	-	3788	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	12.1556571192182	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2697	False	NA	-5	True	AATAAA	-21	NA	141456224	141435319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ENSMUST00000001974.11	chr8	+	2567	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	103.16006979447	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415494	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUST00000001975.6	chr8	-	4344	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_4	52.9172939595365	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414531	85397107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ENSMUST00000001989.9	chrX	+	4071	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	0	0	0	0	multi-exon	FALSE	canonical	3	2172	junction_1	357.223416925598	3987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTAAGTTCGCATGTT	NA	False	NA	NA	False	NA	NA	NA	20529136	20549418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUST00000002029.13	chrX	+	1595	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	18.1592951405059	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTATGTTTTGGTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	73298292	73301493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
ENSMUST00000002043.10	chr11	-	3243	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	0	1950	0	1421	multi-exon	FALSE	canonical	3	609	junction_6	38.2117637500402	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTGTGCTGCTTTG	NA	False	NA	-8	True	ATTAAA	-10	NA	106107170	106090183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ENSMUST00000002044.10	chr11	+	3450	16	FSM	ENSMUSG00000020700.12	ENSMUST00000002044.10	3450	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	10.0066644459247	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGTGCCCAGGGATG	192	False	NA	NA	False	NA	NA	NA	105975438	106046272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036586_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ENSMUST00000002048.8	chr11	+	1383	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5.93717104351896	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTTGAGGTGTCCTGA	874	False	NA	26	True	NA	NA	NA	105956886	105964438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
ENSMUST00000002063.15	chr2	+	4600	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_11	7.58468852359805	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTACAGAGCTGTCATC	NA	False	NA	NA	False	NA	NA	NA	126850649	126909829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ENSMUST00000002064.15	chr2	+	1160	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	50.5988626152721	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	2211	False	NA	NA	False	AATAAA	-20	NA	126912586	126939004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUST00000002080.12	chrX	-	3970	8	FSM	ENSMUSG00000002006.13	ENSMUST00000002080.12	3970	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.699854212223765	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGACTTGTGTTCATT	NA	False	NA	-6	True	AATAAA	-22	NA	72868575	72836964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72839527_72839706_72839818_72839981_72840084_72840435_72840499_72841799_72841899_72842363_72842455_72843439_72843694_72867887
ENSMUST00000002084.14	chrX	+	3648	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_7	8.3901765016235	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCCTGAACTTGGT	NA	False	NA	18	True	AGTAAA	-19	NA	72760202	72782140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
ENSMUST00000002090.3	chrX	+	765	6	FSM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	441.755135793575	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5466	False	NA	48	True	AATAAA	-30	NA	72830667	72834432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUST00000002091.6	chrX	-	1219	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	0	0	0	0	multi-exon	FALSE	canonical	3	2403	junction_7	231.225131040053	1186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTGTGTCTAACTGAG	NA	False	NA	-13	True	AATAAA	-17	NA	72759781	72729783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ENSMUST00000002099.11	chr9	+	1567	12	FSM	ENSMUSG00000002031.14	ENSMUST00000238800.2	1059	12	-193	-315	0	0	multi-exon	FALSE	canonical	3	173	junction_2	11.1058022211458	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCTCATTAGTGTC	NA	False	NA	10	True	AATACA	-19	NA	44684256	44702192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
ENSMUST00000002100.8	chr9	-	2448	9	FSM	ENSMUSG00000002032.18	ENSMUST00000002100.8	2448	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	3.68908864084343	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAGTGTTTGTTCATT	8172	False	NA	NA	False	AGTAAA	-15	NA	44710604	44705072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44706346_44706487_44706575_44706706_44706808_44706978_44707010_44707292_44707425_44707620_44707912_44709417_44709730_44709960_44710055_44710477
ENSMUST00000002112.15	chr7	+	785	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	62.2009646227452	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	507	False	NA	21	True	AGTAAA	-22	NA	19242636	19250070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ENSMUST00000002121.5	chr11	-	6488	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_18	43.9224555183955	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTTATTGTTTTTTTTG	NA	False	NA	-1	True	NA	NA	NA	78136813	78097571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ENSMUST00000002127.14	chr11	+	1329	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	19.8557296516648	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTGTCTATAGGGAA	NA	False	NA	19	True	AATAAA	-26	NA	78234307	78239990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
ENSMUST00000002128.14	chr11	+	1368	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	27.8790243731735	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6025	False	NA	21	True	ATTAAA	-15	NA	78079255	78083014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUST00000002133.9	chr11	+	1268	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	4	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78136571	78146322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78136997_78141841_78142039_78145676
ENSMUST00000002145.12	chr17	-	2867	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCTTGCAGGGATTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	32253482	32163742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ENSMUST00000002145.12-1	chr17	-	1742	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-29	1154	0	159	multi-exon	FALSE	canonical	3	776	junction_1	207.062940248828	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCATCTGCCTGCACTC	NA	False	NA	-20	True	ATTAAA	-14	NA	32253511	32164896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ENSMUST00000002152.13	chr7	+	1814	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	49.2769948578667	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	False	NA	26	True	AATAAA	-19	NA	16043540	16052130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
ENSMUST00000002172.14	chr2	+	2697	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	0	1955	0	0	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGTCTCCAAGATA	5060	False	NA	10	True	AATAAA	-24	NA	91033256	91042487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUST00000002180.8	chr2	+	1416	5	FSM	ENSMUSG00000002111.9	ENSMUST00000002180.8	2034	5	618	0	-66	0	multi-exon	FALSE	canonical	3	17	junction_1	7.28010988928052	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGTGTCTCATTCAAG	9235	False	NA	21	True	AGTAAA	-22	NA	90927058	90946101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90927339_90929774_90929872_90943599_90943791_90944589_90944756_90945419
ENSMUST00000002198.4	chr11	+	4920	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCTCCATTATCCTCATC	NA	False	NA	46	True	TATAAA	-15	NA	4110349	4132541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ENSMUST00000002198.4-1	chr11	+	3001	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	5	1914	0	1208	multi-exon	FALSE	canonical	3	694	junction_11	81.820834075979	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAAGCAGTTTGTCCC	NA	False	NA	7	True	ATTAAA	-22	NA	4110354	4130627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ENSMUST00000002275.15	chr7	+	1969	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	44397836	44426939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ENSMUST00000002275.15-0	chr7	+	1746	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	223	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	19.1081775420785	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAGAGTTCAGTGTTC	NA	False	NA	16	True	AATAAA	-16	NA	44398059	44426939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ENSMUST00000002280.11	chr7	+	2242	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_3	14.7828462881374	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	24099043	24122203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ENSMUST00000002284.11	chr7	+	1506	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	5.84284938098603	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTAGGTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	24161908	24175392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
ENSMUST00000002289.8	chr14	+	903	9	FSM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	0	0	0	0	multi-exon	FALSE	canonical	3	3225	junction_5	471.372729376658	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	117	False	NA	22	True	AATAAA	-18	NA	101891429	101933561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ENSMUST00000002291.12	chr5	-	3726	21	FSM	ENSMUSG00000002221.12	ENSMUST00000002291.12	5850	21	155	1969	0	-1969	multi-exon	FALSE	canonical	0	0	junction_1	176.542771021642	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996393	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ENSMUST00000002292.15	chr6	-	6165	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	25.5828922328966	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGATCCAGTTTGTGA	NA	False	NA	0	True	ATTAAA	-25	NA	71417621	71365617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ENSMUST00000002297.12	chr3	-	3498	20	FSM	ENSMUSG00000002227.16	ENSMUST00000002297.12	3498	20	0	0	0	0	multi-exon	TRUE	canonical	2	35	junction_17	294.113899959836	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725558	104702151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711702_104711786_104712030_104712219_104712424_104725251
ENSMUST00000002298.7	chr3	+	1721	10	FSM	ENSMUSG00000002228.8	ENSMUST00000002298.7	1721	10	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	13.4200881305638	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104688371	104693334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ENSMUST00000002303.12	chr3	+	1202	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	22.8965062837106	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCAGCTTCCTGTCTTT	NA	False	NA	13	True	AATAAA	-20	NA	104696203	104701775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUST00000002305.9	chr6	-	6335	20	FSM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	0	3231	0	2256	multi-exon	FALSE	canonical	3	12	junction_10	4.65544092368336	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAAATTCTA	NA	False	NA	NA	False	NA	NA	NA	39183723	39116787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128191_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296_39152415_39158461_39158548_39183374
ENSMUST00000002320.16	chr17	+	3277	8	FSM	ENSMUSG00000002250.17	ENSMUST00000002320.16	3277	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.32115382989599	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAGCCATCTGAGTTAT	NA	False	NA	26	True	AATAAA	-26	NA	28451673	28520448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28451839_28455985_28456070_28505234_28505442_28514314_28514470_28516059_28516199_28517250_28517454_28517557_28518009_28518575
ENSMUST00000002327.6	chr17	+	2277	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	14.7461859475595	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGCCCTTCCCTCCCTC	NA	False	NA	17	True	AATAAA	-22	NA	28426751	28447582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
ENSMUST00000002344.7	chr17	-	987	5	FSM	ENSMUSG00000002274.14	ENSMUST00000002344.7	987	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	40.1434926233381	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCTTCTGGAGATGGGG	5840	False	NA	NA	False	NA	NA	NA	26016110	26013922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838_26015951_26016039
ENSMUST00000002350.11	chr17	+	2555	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTACTCAAATGACTGC	6920	False	NA	NA	False	AATAAA	-19	NA	25992749	26002306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUST00000002350.11-0	chr17	+	1988	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	31	536	0	0	multi-exon	FALSE	canonical	3	237	junction_8	20.6145579627602	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTGTCTGGTACC	6951	False	NA	11	True	AATAAA	-23	NA	25992780	26001770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUST00000002368.16	chr5	-	2401	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	130.994164276048	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATAATTTCAAGTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	8472680	8446972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ENSMUST00000002379.15	chr17	+	1176	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	12	1021	0	0	multi-exon	FALSE	canonical	3	326	junction_3	13.0072095393286	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCTAGCCTGTTT	7005	False	NA	23	True	ATTAAA	-16	NA	34062076	34067727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
ENSMUST00000002389.9	chr14	-	2791	15	FSM	ENSMUSG00000022218.17	ENSMUST00000002389.9	2791	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	57.2163812707015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTCTGTCTAGGCCAA	802	False	NA	-8	True	AATAAA	-37	NA	55950545	55937475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950391
ENSMUST00000002391.15	chr14	-	2382	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	41.5060236592232	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATTTGAACTTTTTA	5206	False	NA	-44	True	ATTAAA	-22	NA	55880797	55873516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
ENSMUST00000002395.8	chr14	+	2184	20	FSM	ENSMUSG00000002324.9	ENSMUST00000002395.8	2184	20	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	6.49738920505725	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTCTTTTTTTTTTT	1328	False	NA	9	True	ATTAAA	-21	NA	55855493	55862852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55855811_55856002_55856116_55856198_55856268_55856354_55856498_55856577_55856654_55857036_55857158_55858691_55858777_55859671_55859752_55859883_55860020_55860101_55860175_55860250_55860343_55860620_55860671_55860953_55861092_55861377_55861445_55861532_55861700_55861805_55861855_55862179_55862244_55862341_55862459_55862529_55862637_55862732
ENSMUST00000002397.7	chr14	+	1520	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	23	450	0	434	multi-exon	TRUE	canonical	3	97	junction_1	15.6828127988557	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGTTCTTCTATACTTGA	NA	False	NA	27	True	ATTAAA	-28	NA	55909714	55916207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUST00000002400.7	chr14	-	1733	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_4	50.5750926840476	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTAAGCTGTATCTG	2285	False	NA	-8	True	AATAAA	-29	NA	55897965	55895335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ENSMUST00000002403.10	chr14	-	1477	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	15.4833580014156	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTTCTCATTCTGT	NA	False	NA	0	True	AATAAA	-20	NA	55983147	55976476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
ENSMUST00000002413.15	chr8	+	2198	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	14	806	0	0	multi-exon	FALSE	canonical	3	91	junction_1	38.6768771547844	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTGGCCCAGTCATGT	5880	False	NA	32	True	AATAAA	-42	NA	70625068	70635525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUST00000002418.15-1	chr8	+	1972	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	214	-1376	0	1313	multi-exon	TRUE	canonical	3	86	junction_5	44.6183818621877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGTGGTCTGTGGTGCC	8827	False	NA	26	True	ATTAAA	-36	NA	70592362	70601282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ENSMUST00000002436.11	chr17	+	3331	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCAGATTCCCAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	5891603	5982229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUST00000002436.11-0	chr17	+	2397	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	23	911	0	-911	multi-exon	FALSE	canonical	3	159	junction_6	26.0644662593364	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTTTCAGTCCTTTGG	NA	False	NA	NA	False	AATAAA	-24	NA	5891626	5981318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUST00000002444.15	chr17	-	3350	18	FSM	ENSMUSG00000024206.16	ENSMUST00000002444.15	3350	18	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	62.8192882463543	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGGTGTCCGTGTTTG	NA	False	NA	-4	True	NA	NA	NA	57138008	57082899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ENSMUST00000002445.10	chr17	+	2373	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_2	28.8962896503263	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980357	57018764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUST00000002452.8	chr17	+	545	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	2627	junction_1	54.2975342186201	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	False	NA	18	True	AATAAA	-18	NA	57024766	57029137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
ENSMUST00000002457.2	chr4	+	2940	7	FSM	ENSMUSG00000002384.3	ENSMUST00000002457.2	2940	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGGTCATGGTGTT	116	False	NA	NA	False	NA	NA	NA	122998957	123019884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_122999469_123008360_123008551_123008938_123009088_123015678_123015874_123016308_123016389_123016739_123016851_123018180
ENSMUST00000002466.9	chr8	-	2218	4	FSM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	9.56846672960488	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCAGCCTCTGCTTT	NA	False	NA	-8	True	AATAAA	-12	NA	71834604	71826770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71827399_71828392_71828918_71831032_71831128_71833634
ENSMUST00000002469.9	chr8	+	1119	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	-41	533	0	201	multi-exon	FALSE	canonical	3	42	junction_2	9.2736184954957	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGTGCAGCTACCTAA	NA	False	NA	11	True	AGTAAA	-16	NA	71823941	71825800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
ENSMUST00000002473.10	chr8	+	1433	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	29.4573314303927	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGTATGGCTTCAGGC	NA	False	NA	89	True	ACTAAA	-7	NA	71849504	71857263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ENSMUST00000002502.12	chr3	+	4955	25	FSM	ENSMUSG00000002428.13	ENSMUST00000002502.12	4955	25	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	28.4765680965168	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6938	False	NA	16	True	AATAAA	-20	NA	20111974	20172654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUST00000002518.9	chr10	+	1411	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	2772	junction_6	274.064925397858	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGTGTCCCTGCTTCT	57	False	NA	14	True	AATAAA	-16	NA	81395327	81402196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUST00000002529.7	chr2	+	3054	21	FSM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_3	47.7921280128851	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGGGCTTGGGCCTCA	2494	False	NA	28	True	ATTAAA	-16	NA	181243111	181297453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ENSMUST00000002532.9	chr2	-	1511	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	20.8461027532726	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTGTTCTTTCAAGTT	NA	False	NA	-15	True	AATAAA	-14	NA	181335770	181330214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ENSMUST00000002551.5	chr18	+	858	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGGTGCATGTCTTTA	-32	True	NA	8	True	AATAAA	-15	NA	10617774	10628230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ENSMUST00000002551.5-0	chr18	+	562	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	21	275	0	0	multi-exon	FALSE	canonical	3	1823	junction_2	40.4337592722825	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAGTGTAGGGACAGA	-11	True	NA	2	True	NA	NA	NA	10617795	10627955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ENSMUST00000002572.6	chr17	-	2136	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	35.3478743663919	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGCCTGTGTGTTTT	5141	False	NA	-6	True	ATTAAA	-17	NA	24869301	24858259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUST00000002588.11	chr16	-	7289	28	FSM	ENSMUSG00000002489.17	ENSMUST00000002588.11	7289	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	15.0582772812045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGACTTCCCTGTGCCT	NA	False	NA	-2	True	AATAAA	-14	NA	89757715	89583999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89757564
ENSMUST00000002599.11	chr15	-	1821	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_7	140.604729650179	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952761	75942038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUST00000002625.15	chr2	-	2005	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	20.9741904889478	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTGTCCTGTTTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	32150171	32145013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
ENSMUST00000002655.8	chr11	-	747	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_2	62.9567752950829	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTGTGTTTATGTCCA	NA	False	NA	1	True	AATAAA	-26	NA	98329817	98328533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
ENSMUST00000002678.10	chr7	+	2175	7	FSM	ENSMUSG00000002603.16	ENSMUST00000002678.10	2175	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	3.1446603773522	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGTCTCCGTGTCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	25386426	25404502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25396342_25396421_25396549_25396698_25403549_25403704_25404208
ENSMUST00000002678.10-0	chr7	+	1316	7	FSM	ENSMUSG00000002603.16	ENSMUST00000002678.10	2175	7	859	0	-287	0	multi-exon	FALSE	canonical	3	17	junction_4	3.1446603773522	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGTCTCCGTGTCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	25387285	25404502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25396342_25396421_25396549_25396698_25403549_25403704_25404208
ENSMUST00000002683.3	chr7	-	3032	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	5.52268050859363	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTCATCTGTTATGTAA	NA	False	NA	-3	True	ATTAAA	-24	NA	25418513	25410530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
ENSMUST00000002699.7	chr17	-	3731	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	0	0	0	0	multi-exon	TRUE	canonical	3	426	junction_6	74.0811964579343	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCATTAATTAC	NA	False	NA	-1	True	AATAAA	-16	NA	32540159	32522645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUST00000002710.10	chr7	-	1295	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGGTTTATTGTTCA	5732	False	NA	-6	True	TATAAA	-15	NA	33896086	33883923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ENSMUST00000002710.10-0	chr7	-	1161	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	0	134	0	0	multi-exon	FALSE	canonical	3	638	junction_2	61.3994209165599	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTTTACCTTAT	5732	False	NA	NA	False	ATTAAA	-20	NA	33896086	33884057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ENSMUST00000002733.7	chr17	-	1717	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_7	59.552672763977	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318288	57310404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ENSMUST00000002735.9	chr17	+	983	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_4	119.017645750536	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57297304	57303188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
ENSMUST00000002737.7	chr17	+	917	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAACAAAAAACC	371	False	NA	NA	False	NA	NA	NA	57304342	57306322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
ENSMUST00000002737.7-0	chr17	+	736	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	-4	185	0	0	multi-exon	FALSE	canonical	3	443	junction_1	15.369522511198	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGGATCTTCAAATG	367	False	NA	4	True	AATAAA	-14	NA	57304338	57306137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
ENSMUST00000002756.14	chr12	-	1003	8	FSM	ENSMUSG00000002679.15	ENSMUST00000002756.14	1003	8	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATCATGCCTTTCCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	81641732	81620338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ENSMUST00000002757.11	chr12	-	583	4	FSM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	35	1389	0	0	multi-exon	FALSE	canonical	3	142	junction_1	95.530099968544	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	1023	False	NA	-6	True	ATTAAA	-14	NA	81531859	81518866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81531670
ENSMUST00000002765.9	chr12	-	3653	19	FSM	ENSMUSG00000002688.9	ENSMUST00000002765.9	3653	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	5.99897110519693	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTCATACTAATCAA	NA	False	NA	-4	True	AATAAA	-14	NA	50695881	50388013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50466635_50466660_50472221_50472383_50474885_50475018_50536685_50536825_50695498
ENSMUST00000002790.14	chr2	+	3641	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_12	67.9214722226255	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTTTTTATTGTTTTC	NA	False	NA	37	True	CATAAA	-33	NA	166747978	166788309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ENSMUST00000002805.14	chr2	+	1172	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	436.248094551713	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	False	NA	31	True	TATAAA	-16	NA	145745160	145758345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
ENSMUST00000002808.7	chr2	-	1614	8	FSM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	7.52953368748825	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTAGCTTTATTCTTTGT	NA	False	NA	35	True	NA	NA	NA	76478359	76460241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
ENSMUST00000002809.14	chr2	-	860	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	10.2089285540757	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTGCAAATCTGACT	NA	False	NA	-13	True	AATAAA	-26	NA	76503414	76493387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
ENSMUST00000002817.12	chr11	-	1872	19	FSM	ENSMUSG00000057897.15	ENSMUST00000002817.12	1872	19	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	16.5324223165972	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGATGATGACAACGACAA	2880	False	NA	-147	True	TTTAAA	-3	NA	6015742	5921671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUST00000002818.9	chr11	+	2541	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_4	17.3205080756888	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGTGTTTACTTT	NA	False	NA	19	True	GATAAA	-20	NA	5905692	5917780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
ENSMUST00000002825.6	chr5	+	6492	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_5	50.9896201008077	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	False	NA	41	True	AATAAA	-44	NA	135216117	135274983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ENSMUST00000002837.11	chr5	-	3800	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	14.1656862405839	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	False	NA	0	True	AATAAA	-31	NA	108280486	108269492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ENSMUST00000002839.9	chr17	-	2926	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_9	37.0099958918988	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1109	False	NA	NA	False	AATAAA	-15	NA	47015928	46993916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ENSMUST00000002840.9	chr17	+	3200	17	FSM	ENSMUSG00000002763.17	ENSMUST00000002840.9	3200	17	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_1	12.2574913318346	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	False	NA	11	True	AATAAA	-18	NA	47022388	47036467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ENSMUST00000002844.14	chr17	+	1031	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_4	70.4430423975443	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957154	46961058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ENSMUST00000002845.8	chr17	+	859	4	FSM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	390.850639275699	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTGTGCTCCTGAATCC	NA	False	NA	5	True	AATAAA	-30	NA	46992049	46994037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46992132_46992542_46992824_46992934_46993038_46993644
ENSMUST00000002846.9	chr17	-	1035	6	FSM	ENSMUSG00000002769.10	ENSMUST00000002846.9	1035	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	8.1338797630651	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCCTGGTGTTTCTT	2979	False	NA	NA	False	AGTAAA	-23	NA	47040094	47036589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47036898_47036986_47037109_47037194_47037338_47037531_47037643_47038190_47038319_47039871
ENSMUST00000002855.14	chr7	+	1599	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	0	0	0	0	multi-exon	TRUE	canonical	3	208	junction_1	16.5378354085412	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTCCCTGCCCGCT	3944	False	NA	17	True	AATAAA	-21	NA	45522195	45533156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ENSMUST00000002880.7	chr12	+	2057	4	FSM	ENSMUSG00000002803.15	ENSMUST00000002880.7	2057	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	3.55902608401044	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACAAGAACCAAATGTAG	NA	False	NA	NA	False	AATAAA	-9	NA	112940182	112942550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
ENSMUST00000002881.5	chr12	-	734	5	FSM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	82.3995600716412	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATAAAGCTTGTGTAAGT	8854	False	NA	-32	True	GGGGCT	-44	NA	112905737	112898374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112898671_112901975_112902178_112902414_112902480_112902898_112902943_112905610
ENSMUST00000002883.7	chr13	+	1764	6	FSM	ENSMUSG00000021319.8	ENSMUST00000002883.7	1764	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1.72046505340853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTGTTTGTTGTCTGC	NA	False	NA	NA	False	GATAAA	-28	NA	19807344	19816999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235_19814300_19816348
ENSMUST00000002885.8	chr13	-	2363	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	5.5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAGCCTATTAAGTCTC	NA	False	NA	NA	False	AATAAA	-34	NA	19803974	19775875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_19777519_19778616_19778826_19803463
ENSMUST00000002889.5	chr11	-	4060	30	FSM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	0	0	0	0	multi-exon	TRUE	canonical	3	227	junction_19	35.2603363548522	653	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTTTTAATATTAAA	NA	False	NA	NA	False	ATTAAA	-26	NA	60618089	60604968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ENSMUST00000002891.11	chr11	-	3741	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_8	18.9965071513323	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGGTGGCATTCAGTC	NA	False	NA	1	True	AATAAA	-16	NA	60668191	60630883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ENSMUST00000002902.8	chr9	+	1316	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_5	65.5845510263914	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTCTTGTGTCTGTC	2369	False	NA	42	True	TATAAA	-28	NA	21323132	21331570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ENSMUST00000002911.10	chr17	+	2264	16	FSM	ENSMUSG00000002833.12	ENSMUST00000002911.10	2264	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	225.638196136105	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACAGCTTTTATT	NA	False	NA	NA	False	TATAAA	-14	NA	56386637	56407596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ENSMUST00000002914.10	chr17	+	5535	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_3	50.5723455079702	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGATGAGTGAGGA	NA	False	NA	NA	False	ATTAAA	-11	NA	56347438	56377276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUST00000002914.10-0	chr17	+	3338	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	-51	2248	-51	-804	multi-exon	FALSE	canonical	3	392	junction_3	50.5723455079702	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCTGTCTCAA	NA	False	NA	22	True	TATAAA	-16	NA	56347387	56375028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUST00000002923.10	chr16	-	2966	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	0	0	0	0	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGGCTGGAGACCTTT	NA	False	NA	NA	False	NA	NA	NA	38273065	38264391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ENSMUST00000002923.10-0	chr16	-	1567	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	21	1378	0	-1378	multi-exon	FALSE	canonical	3	1151	junction_2	86.2824818063706	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTTTGTCTGACTTT	NA	False	NA	NA	False	NA	NA	NA	38273044	38265769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ENSMUST00000002924.15	chr16	+	2006	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	49	816	0	0	multi-exon	FALSE	canonical	1	126	junction_1	222.417084269622	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGGTTGCCCCTTCA	NA	False	NA	-15	True	NA	NA	NA	38383222	38411708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUST00000002925.6	chr16	-	1573	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_6	22.2666916167525	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTGGATCGCCT	NA	False	NA	-16	True	AGTAAA	-22	NA	38343025	38318708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ENSMUST00000002926.8	chr16	-	1974	11	FSM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	86.6256313108309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	-3	True	AATAAA	-20	NA	38253507	38216478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38253165
ENSMUST00000002964.14	chr8	-	2986	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_14	43.193056599508	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAGCTTTGGAACAATA	NA	False	NA	NA	False	AATAAA	-17	NA	84467955	84449879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUST00000002976.5	chr6	+	3922	13	FSM	ENSMUSG00000002897.6	ENSMUST00000002976.5	7752	13	0	3830	0	0	multi-exon	FALSE	canonical	1	10	junction_10	8.77931596930472	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCATAGTTGTTATTGAA	312	False	NA	5	True	AATAAA	-18	NA	120440207	120460690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455124_120455137_120455335_120455444_120456963_120457006_120457943
ENSMUST00000002979.16	chr12	+	5784	33	FSM	ENSMUSG00000002900.18	ENSMUST00000002979.16	5784	33	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_13	20.6626313894794	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTTTCTTTTATTGT	NA	False	NA	NA	False	AATAAA	-23	NA	31315291	31379643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ENSMUST00000002989.11	chr8	-	2355	8	FSM	ENSMUSG00000002910.12	ENSMUST00000002989.11	2355	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.6330504688314	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGTCTTTTCATTTG	NA	False	NA	-1	True	AATAAA	-20	NA	71292364	71287772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290011_71290087_71290191_71291337_71291486_71291622_71291690_71291771
ENSMUST00000003029.14	chr8	-	1790	13	FSM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	35.4920765805553	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325913	4309730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ENSMUST00000003035.12	chr1	-	4984	10	FSM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	20.4420288428002	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTCTCCGTCGTTCT	NA	False	NA	2	True	AATAAA	-34	NA	183003049	182867829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
ENSMUST00000003038.12	chr7	+	4646	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGTGGTTTTTGTGG	9596	False	NA	28	True	AATAAA	-22	NA	141142085	141212924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ENSMUST00000003038.12-0	chr7	+	3251	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	35	1360	0	-1360	multi-exon	FALSE	canonical	3	504	junction_7	69.5768877620837	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	9631	False	NA	36	True	ATTAAA	-20	NA	141142120	141211564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ENSMUST00000003044.14	chr7	+	2184	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGACTTAGCAGCTGTGT	9335	False	NA	90	True	NA	NA	NA	44506582	44512416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUST00000003044.14-0	chr7	+	1661	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	181	342	0	0	multi-exon	FALSE	canonical	3	182	junction_9	24.7059147214229	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9516	False	NA	15	True	AATAAA	-17	NA	44506763	44512074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUST00000003061.14	chr7	-	2429	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	0	0	0	0	multi-exon	TRUE	canonical	3	510	junction_11	49.5145824737624	900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCGCCAGGTTCTCTTCT	3912	False	NA	-5	True	AATAAA	-26	NA	19504472	19490055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ENSMUST00000003066.16	chr7	-	1128	4	FSM	ENSMUSG00000002985.17	ENSMUST00000003066.16	1128	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4936.24555935199	6030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432977	19430196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19431029_19431403_19431573_19432112_19432198_19432935
ENSMUST00000003117.15	chr8	+	2084	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_9	40.3802177244139	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTCTCTGTGT	NA	False	NA	19	True	ATTAAA	-20	NA	72993861	73011229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUST00000003121.9	chr8	+	4550	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	0	0	0	0	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTGCAGTAGCAAGTT	NA	False	NA	NA	False	NA	NA	NA	72915043	72937748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUST00000003121.9-0	chr8	+	1769	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	159	2622	0	-2622	multi-exon	FALSE	canonical	3	900	junction_6	72.9808473617062	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCTCCCCTGGAGTCT	NA	False	NA	26	True	ATTAAA	-23	NA	72915202	72935126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUST00000003123.10-1	chr8	+	1576	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	0	988	0	0	multi-exon	FALSE	canonical	3	920	junction_3	34.4705993887867	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTGTGCGTGAAAC	NA	False	NA	18	True	AATATA	-14	NA	72973573	72977274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ENSMUST00000003135.14	chr1	-	2095	9	FSM	ENSMUSG00000003051.14	ENSMUST00000003135.14	2095	9	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_7	111.074791807142	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGAGCTCTCTGTGTAC	NA	False	NA	-6	True	AATAAA	-27	NA	135186306	135181312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
ENSMUST00000003152.14	chr10	+	2566	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	19.2898617266195	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGGGCTGTTCTGTC	2647	False	NA	20	True	AATAAA	-24	NA	79951636	79966516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
ENSMUST00000003154.7	chr10	+	2131	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	9.10433352249844	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGGCCTCTCTGTTACA	NA	False	NA	16	True	AATAAA	-17	NA	80015315	80025844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
ENSMUST00000003156.15	chr10	+	931	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	2420	junction_3	40.5983031938802	702	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTTCTAACTGCAC	4445	False	NA	20	True	ATTAAA	-19	NA	79978148	79981652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
ENSMUST00000003183.12	chr7	-	2072	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	0	0	0	0	multi-exon	FALSE	canonical	3	1050	junction_5	57.0079794609686	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761841	16738564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ENSMUST00000003191.14	chr17	-	5517	18	FSM	ENSMUSG00000024070.16	ENSMUST00000003191.14	5517	18	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_8	46.9649799591201	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTATGTGAAAACCTT	NA	False	NA	1	True	AATAAA	-22	NA	79320735	79256833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270006_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052
ENSMUST00000003203.14	chr11	+	4837	13	FSM	ENSMUSG00000003119.15	ENSMUST00000003203.14	4837	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	13.3111795119741	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGTTCTCTATGATG	NA	False	NA	NA	False	AATACA	-19	NA	98094139	98137530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042
ENSMUST00000003207.11	chr7	-	3114	10	FSM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	381	118	381	0	multi-exon	FALSE	canonical	3	24	junction_6	4.8099690715363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGAGTGTGTTTTCCCAG	NA	False	NA	0	True	AATAAA	-27	NA	25095423	25079069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
ENSMUST00000003219.14	chr1	+	3162	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAGGAAAAAATATT	NA	False	NA	NA	False	NA	NA	NA	39574882	39585954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ENSMUST00000003219.14-0	chr1	+	1690	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	0	1472	0	0	multi-exon	FALSE	canonical	3	674	junction_2	52.6289421854131	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTCCCATGGATGAA	NA	False	NA	27	True	AGTAAA	-15	NA	39574882	39584482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ENSMUST00000003238.14	chr6	+	5283	11	FSM	ENSMUSG00000003154.16	ENSMUST00000003238.14	5283	11	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	4.4	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGTTTTTATGTTA	2577	False	NA	75	True	AATAAA	-20	NA	122796872	122822325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122797930_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ENSMUST00000003245.10	chr5	+	640	6	FSM	ENSMUSG00000003161.16	ENSMUST00000003245.10	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_3	16.5819178625393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTCCTTTGAAGTTT	NA	False	NA	-11	True	NA	NA	NA	8109341	8117726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ENSMUST00000003268.11	chr17	-	2073	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_1	54.5914116159513	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343635	56323749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUST00000003284.16	chr7	+	1555	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	18	458	0	0	multi-exon	FALSE	canonical	3	81	junction_5	29.0601066054199	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647089	44651814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUST00000003290.12	chr7	-	1075	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	18.8473399243029	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAAGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	44647003	44640645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUST00000003310.7	chr10	+	9608	29	FSM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_18	69.5662490738439	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCAGATAATTTTATTT	NA	False	NA	NA	False	NA	NA	NA	58282743	58330178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ENSMUST00000003318.13	chr16	+	2519	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	17.2123591097342	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGGTGTCTCTACTCA	NA	False	NA	NA	False	AATAAA	-37	NA	20335731	20350421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ENSMUST00000003319.6	chr16	+	3090	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	0	0	0	0	multi-exon	TRUE	canonical	3	293	junction_13	17.6705970470723	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACACGTGCAAGAGCATG	NA	False	NA	10	True	AATAAA	-19	NA	20367326	20380129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ENSMUST00000003320.14	chr16	+	2554	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	0	0	0	0	multi-exon	TRUE	canonical	3	2657	junction_7	154.998007155648	4587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317566	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUST00000003345.10	chr13	+	3367	21	FSM	ENSMUSG00000021314.14	ENSMUST00000003345.10	3367	21	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	8.61669890387264	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTTTTTCAAGAGTG	NA	False	NA	19	True	AATAAA	-24	NA	19132374	19335091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ENSMUST00000003351.13	chr11	-	4279	13	FSM	ENSMUSG00000020734.14	ENSMUST00000003351.13	4279	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	1.68942791105944	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCTAGCTGCCTCAC	6877	False	NA	NA	False	ATTAAA	-19	NA	115156255	115139994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115141534_115141834_115142068_115143408_115143597_115144033_115144195_115144523_115144754_115144878_115145005_115146098_115146253_115146511_115146678_115146868_115147081_115148162_115148278_115148598_115149198_115151559_115151974_115156113
ENSMUST00000003386.7	chr9	+	1288	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_5	79.3851371479574	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGGTCACTGCTGTGG	NA	False	NA	26	True	AATAAA	-26	NA	20914033	20920135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ENSMUST00000003397.9	chr9	-	1706	11	FSM	ENSMUSG00000003309.15	ENSMUST00000003397.9	1706	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	5.23545604508337	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGAGTGTGCTTCTTG	1345	False	NA	-4	True	ATTAAA	-12	NA	21223607	21206756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21207151_21207728_21207805_21209495_21209622_21210574_21210734_21213751_21213824_21213918_21214062_21216577_21216705_21216788_21217068_21220662_21220731_21220931_21221089_21223502
ENSMUST00000003416.15	chr17	+	2227	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_12	10.7625895273086	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATGTCTTGGTTCCAT	NA	False	NA	20	True	NA	NA	NA	32755542	32770771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUST00000003433.11	chr10	-	3065	12	FSM	ENSMUSG00000020190.14	ENSMUST00000003433.11	3065	12	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_2	28.4604989415154	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTGTGCAGTGAC	NA	False	NA	-51	True	AATAAA	-9	NA	80507810	80501165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761
ENSMUST00000003434.14	chr10	-	3026	9	FSM	ENSMUSG00000003344.15	ENSMUST00000003434.14	3026	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_4	58.371118714652	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTATGTTGTCTGAGTG	NA	False	NA	1	True	AATAAA	-26	NA	80492905	80478450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ENSMUST00000003436.12	chr10	-	1468	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	0	0	0	0	multi-exon	TRUE	canonical	3	337	junction_4	42.7631558704453	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7798	False	NA	-5	True	ATTAAA	-15	NA	80426175	80419487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
ENSMUST00000003438.11	chr10	-	2682	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	9.97775303139718	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGGCTGCTCCTTGTTG	9117	False	NA	-1	True	AATAAA	-16	NA	80537689	80521086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
ENSMUST00000003445.8	chr15	-	734	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_4	33.5177564881661	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTTGTATTTTTCACT	NA	False	NA	NA	False	AATAAA	-15	NA	98626079	98622250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ENSMUST00000003450.15	chr15	-	3187	17	FSM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	5.44252641243017	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCAGCCCCGAGCTCC	6999	False	NA	-14	True	AATAAA	-15	NA	98560770	98543014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
ENSMUST00000003451.11	chr15	-	1630	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	3	570	0	-570	multi-exon	FALSE	canonical	3	35	junction_3	4.54835134966506	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGGGTTTTGTTGTTG	NA	False	NA	NA	False	AATATA	-14	NA	98575339	98567655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
ENSMUST00000003461.15	chr11	+	4127	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_8	60.360778272973	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241632	6306642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUST00000003493.9	chr9	+	2012	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_11	125.012497645132	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914313	21925518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUST00000003502.4	chr4	+	1053	4	FSM	ENSMUSG00000003411.11	ENSMUST00000003502.4	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	6.34209919681348	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGCTTGTTTCCTATC	NA	False	NA	7	True	ATTAAA	-18	NA	108747486	108798385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108747733_108781102_108781222_108786598_108786724_108797822
ENSMUST00000003509.10	chr2	-	7618	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCGTTGTGAGTGTGC	NA	False	NA	NA	False	NA	NA	NA	13798875	13655831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ENSMUST00000003509.10-0	chr2	-	3509	8	FSM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	216	3893	216	2240	multi-exon	FALSE	canonical	3	67	junction_4	4.91146098219174	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAGTACACCAGA	NA	False	NA	NA	False	NA	NA	NA	13798659	13659724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_13662102_13670230_13670324_13673595_13673709_13677293_13677439_13701638_13701726_13728253_13728344_13797564_13797664_13798154
ENSMUST00000003513.11	chr7	+	1814	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	63.7582102556212	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	3085	False	NA	25	True	NA	NA	NA	44711879	44727634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUST00000003521.10	chr7	-	661	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	0	0	0	0	multi-exon	FALSE	canonical	3	18027	junction_3	5229.01092463957	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGAGTCTCATGTGTC	NA	False	NA	-1	True	AATAAA	-24	NA	44773863	44771802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUST00000003527.10	chr7	-	3513	30	FSM	ENSMUSG00000003435.10	ENSMUST00000003527.10	3513	30	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_29	71.450522531579	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038144	28014318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ENSMUST00000003529.9	chr7	+	2003	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	16.9726546514433	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTAAAGTCTCTGTTCC	569	False	NA	20	True	AATAAA	-21	NA	28092375	28098813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ENSMUST00000003536.9	chr7	-	1281	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTAGCTCCAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	28092133	28085570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
ENSMUST00000003536.9-0	chr7	-	691	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	0	590	0	-590	multi-exon	FALSE	canonical	3	529	junction_2	10.3387082795139	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGTTCCTGTTGCTGA	NA	False	NA	-19	True	AATGAA	-19	NA	28092133	28086160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
ENSMUST00000003550.11	chr1	-	2901	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_8	31.8580224394108	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	8996	False	NA	50	True	ATTAAA	-21	NA	171910362	171893579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ENSMUST00000003572.10	chr6	+	2380	17	FSM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	747.261037786495	4176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTTGTGTTTCCAT	NA	False	NA	35	True	ATTAAA	-29	NA	55014991	55056485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUST00000003575.11	chr8	+	2158	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	35.3714978074559	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATTTATTCTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	72889072	72906986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUST00000003612.13	chr11	-	4212	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTCTGTTTTGTGTTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	101875625	101861968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101865766_101872442_101872670_101875437
ENSMUST00000003620.13	chr16	-	2386	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTCTCTTGGTACCT	7943	False	NA	0	True	AATAAA	-20	NA	17907156	17889588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
ENSMUST00000003620.13-0	chr16	-	2256	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	129	1	0	0	multi-exon	FALSE	canonical	3	102	junction_5	13.1900087703135	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	8072	False	NA	-1	True	AATAAA	-19	NA	17907027	17889589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
ENSMUST00000003621.10	chr16	-	2821	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTTCTATCAATTGT	NA	False	NA	0	True	NA	NA	NA	17729212	17718572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
ENSMUST00000003621.10-0	chr16	-	1765	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	0	1056	0	1053	multi-exon	FALSE	canonical	3	145	junction_7	18.4397584408805	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGGCTGCTGATCCAT	NA	False	NA	-1	True	ATTAAA	-18	NA	17729212	17719628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
ENSMUST00000003622.16	chr16	-	1666	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	0	0	0	0	multi-exon	FALSE	canonical	3	1593	junction_8	124.030175259894	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746083	17743086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ENSMUST00000003635.7	chr17	+	1131	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGAAGTGTATCATTC	NA	False	NA	16	True	AATAAA	-29	NA	36132575	36133815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36132821_36132929
ENSMUST00000003642.7	chr17	-	2322	16	FSM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	25.3531501439608	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGTGTTCGGAGTC	NA	False	NA	-9	True	AATAAA	-11	NA	46956070	46941556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006
ENSMUST00000003645.9	chr7	+	1046	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	329	0	0	0	multi-exon	TRUE	canonical	3	315	junction_9	39.5851948880006	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1040	False	NA	15	True	AATAAA	-20	NA	19079031	19090449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUST00000003655.9	chr19	+	1736	11	FSM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	16.3612346722367	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGATGTCTGTAGTTT	5974	False	NA	30	True	AATAAA	-40	NA	46695896	46729534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUST00000003669.8	chr8	+	2323	9	FSM	ENSMUSG00000003573.16	ENSMUST00000003669.8	2323	9	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_8	39.6192819218118	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGAGATCTGGCTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	70737895	70747003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ENSMUST00000003677.11	chr11	+	1874	9	FSM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	6.41165930161608	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCTGTTAAGACATAA	7850	False	NA	NA	False	AATAAA	-19	NA	4085201	4091172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4089859_4089934_4090079_4090297_4090401_4090486
ENSMUST00000003681.8	chr11	-	2631	12	FSM	ENSMUSG00000003585.14	ENSMUST00000003681.8	2631	12	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_11	8.90816321700644	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAATTCATTGCCCAT	NA	False	NA	0	True	AATAAA	-22	NA	4068831	4047038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4048436_4053387_4053558_4053673_4053814_4053894_4054002_4058496_4058581_4058963_4059025_4059148_4059245_4061036_4061226_4061442_4061503_4061893_4061938_4066680_4066757_4068624
ENSMUST00000003705.12	chr2	+	1413	6	FSM	ENSMUSG00000003604.15	ENSMUST00000003705.12	4735	6	0	3322	0	340	multi-exon	FALSE	canonical	3	555	junction_4	26.4227174983952	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATGTTTCCTTTCTTC	NA	False	NA	2	True	AATAAA	-13	NA	112323308	112461596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
ENSMUST00000003720.5	chr5	-	2996	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_6	20.8630399507397	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGTTGAAAACAATGATTGT	NA	False	NA	-11	True	AATAAA	-30	NA	9047324	9016032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ENSMUST00000003726.16	chr17	-	5957	20	FSM	ENSMUSG00000024002.19	ENSMUST00000003726.16	5957	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	94.0729074248125	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503071	32415247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390_32448710_32471970_32472175_32503036
ENSMUST00000003741.16	chr4	-	3085	22	FSM	ENSMUSG00000003644.18	ENSMUST00000003741.16	3085	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	262.602024229159	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	7977	False	NA	-9	True	AATAAA	-14	NA	133615095	133574604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592710_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ENSMUST00000003754.8	chr8	-	1431	11	FSM	ENSMUSG00000003657.10	ENSMUST00000003754.8	1431	11	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	44.1960405466372	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCACCCGTTTCTTGTCG	7616	False	NA	-12	True	AATAAA	-22	NA	110894838	110869169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110881284_110881375_110883551_110883629_110894675
ENSMUST00000003759.11	chr2	-	3075	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTTAGTTTTCTGA	NA	False	NA	NA	False	NA	NA	NA	127089736	127082857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ENSMUST00000003759.11-0	chr2	-	1398	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	57	1620	57	62	multi-exon	FALSE	canonical	3	164	junction_2	19.7793382655291	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGCTTTTGAAATTG	NA	False	NA	-22	True	AATATA	-20	NA	127089679	127084477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ENSMUST00000003777.5	chr19	-	1869	10	FSM	ENSMUSG00000003680.17	ENSMUST00000003777.5	1869	10	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	26.2005560208647	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGCGGCGCCTCGGAGAA	NA	False	NA	-40	True	NA	NA	NA	8761363	8751892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198
ENSMUST00000003808.8	chr8	-	1545	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	1015	False	NA	-6	True	AATAAA	-18	NA	71084745	71082042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71082825_71083982
ENSMUST00000003818.14	chr1	-	2697	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	17.805617091244	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255753	121232081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ENSMUST00000003828.11	chr4	-	2195	14	FSM	ENSMUSG00000003731.14	ENSMUST00000003828.11	2195	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	39.900171285836	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTAATCTTGTATGCTT	2563	False	NA	-29	True	NA	NA	NA	129556272	129541276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129556192
ENSMUST00000003843.16	chr10	-	5137	13	FSM	ENSMUSG00000003746.17	ENSMUST00000003843.16	5137	13	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_11	2.28977194400568	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTTGTCACTGTG	5483	False	NA	NA	False	AATAAA	-19	NA	53951892	53780880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_53783660_53784038_53784155_53795253_53795427_53796138_53796359_53801525_53801642_53809587_53809682_53810984_53811109_53853118_53853214_53890510_53890592_53901809_53901926_53906793_53906891_53950511_53951367_53951621
ENSMUST00000003850.8	chr7	-	3247	7	FSM	ENSMUSG00000003752.10	ENSMUST00000003850.8	3247	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	5.28099317258495	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGGTATTTTCTTGG	NA	False	NA	-2	True	AATAAA	-15	NA	26928053	26906596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26907870_26911736_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
ENSMUST00000003857.7	chr7	-	2358	18	FSM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_5	29.8825845289775	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATAGTCTTGGTTTG	NA	False	NA	-28	True	AATAAA	-17	NA	27055444	27041557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ENSMUST00000003860.13	chr7	+	2181	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_1	14.7544528041883	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTCTCTCTGTGCTA	NA	False	NA	22	True	AATAAA	-22	NA	26932447	26957375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUST00000003870.15	chr19	+	2627	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	71.8843515655528	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	NA	False	NA	18	True	AATAAA	-23	NA	53298948	53361724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ENSMUST00000003898.12	chr16	+	3152	19	FSM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_18	7.37781124490401	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCCTGTCTCTTCCTT	NA	False	NA	13	True	AATAAA	-13	NA	20448577	20464665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUST00000003906.13	chr8	+	1826	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_9	56.0676055212713	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583617	85595886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUST00000003907.14	chr8	-	2167	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	21.1293634546808	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATACTTTGGCTTCTCAA	NA	False	NA	-5	True	AATAAA	-9	NA	85620546	85613021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
ENSMUST00000003908.11	chr4	-	5445	29	FSM	ENSMUSG00000003810.14	ENSMUST00000003908.11	5445	29	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	30.4319246978617	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8748	False	NA	-2	True	AATACA	-16	NA	116321119	116163958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ENSMUST00000003910.13	chr8	+	1715	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	11.7711511756497	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGACTTGAATTTGTTT	NA	False	NA	18	True	NA	NA	NA	85635188	85638098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ENSMUST00000003911.13	chr8	-	2074	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	0	0	0	0	multi-exon	TRUE	canonical	3	805	junction_3	189.238440862315	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCATCTGCTCCTTCA	NA	False	NA	NA	False	NA	NA	NA	85567270	85561280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUST00000003912.7	chr8	-	1839	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	104	241	0	-241	multi-exon	FALSE	canonical	3	1093	junction_6	113.438791314964	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTCTCCTTCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	85573459	85568719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUST00000003922.6	chr8	+	685	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCCTTTGCTCTTTCCC	NA	False	NA	91	True	AAAACA	-4	NA	85598821	85614085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
ENSMUST00000003922.6-0	chr8	+	625	4	FSM	ENSMUSG00000003824.13	ENSMUST00000003922.6	685	4	0	60	0	-50	multi-exon	FALSE	canonical	3	832	junction_2	470.355184940062	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598821	85614025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85598883_85599348_85599462_85612563_85612753_85613763
ENSMUST00000003946.9	chr8	-	1658	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	34.7902195307819	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTGTTTTATTT	NA	False	NA	-3	True	AATAAA	-14	NA	108151681	108139120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ENSMUST00000003947.9	chr8	-	1553	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	9.8264947972306	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGCGCATGCCTTT	NA	False	NA	-2	True	AATAAA	-18	NA	108129838	108114856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ENSMUST00000003964.17	chr7	+	3678	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_1	61.1041369757855	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	1027	False	NA	25	True	AATACA	-21	NA	45084267	45106043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUST00000004036.6	chr11	-	3183	5	FSM	ENSMUSG00000003934.6	ENSMUST00000004036.6	3183	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	2.17944947177034	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAAGGCTGGAAAATGAC	NA	False	NA	1	True	TTTAAA	-7	NA	69451031	69444917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69447096_69447518_69447624_69447731_69447825_69448025_69448319_69450517
ENSMUST00000004050.7	chr11	+	2677	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	11.2249721603218	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGCTGAGAGTAATGCT	NA	False	NA	29	True	AATAAA	-34	NA	90140301	90169415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ENSMUST00000004051.8	chr11	-	1542	4	FSM	ENSMUSG00000003949.17	ENSMUST00000004051.8	5642	4	0	4100	0	191	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGGTGTGCATCTAT	NA	False	NA	NA	False	NA	NA	NA	90281721	90231461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90281075
ENSMUST00000004054.13	chr16	+	5039	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACAGGTTTTCCTTGGG	NA	False	NA	26	True	AATAAA	-39	NA	35803684	35857501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ENSMUST00000004054.13-0	chr16	+	3886	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	39	1114	0	886	multi-exon	FALSE	canonical	3	400	junction_10	42.2312596300516	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGTGGCTGATTTC	NA	False	NA	10	True	AGTAAA	-21	NA	35803723	35856387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ENSMUST00000004055.10	chr14	-	4079	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_20	6.55588223176215	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCGACTGTGGCTGCTT	NA	False	NA	-6	True	AGTAAA	-14	NA	119162799	119113669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ENSMUST00000004057.9	chr16	-	711	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	-79	86	0	0	multi-exon	FALSE	canonical	3	971	junction_1	40.7982842776507	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTTGTCTTTGTTTTGT	NA	False	NA	-6	True	AATACA	-13	NA	35891964	35864216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
ENSMUST00000004072.10	chr15	+	851	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	5295	junction_1	2369.37927736359	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788277	76790514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUST00000004094.15	chr13	+	1687	17	FSM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	77	2193	0	0	multi-exon	FALSE	canonical	3	38	junction_13	7.3396930283221	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCATTCACTGTGTC	2798	False	NA	-6	True	AATAAA	-14	NA	91609245	91849355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUST00000004120.9-1	chr11	+	1657	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	1067	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.2544461064019	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAGTCATTAACACCC	NA	False	NA	13	True	AATAAA	-15	NA	26337201	26421876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUST00000004134.11	chr3	+	945	8	FSM	ENSMUSG00000004032.11	ENSMUST00000004134.11	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	3.52252228741084	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTCTAGATGGATTTC	NA	False	NA	11	True	AATAAA	-16	NA	107803136	107806002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
ENSMUST00000004136.10	chr3	-	1311	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876599	107871011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
ENSMUST00000004136.10-0	chr3	-	1201	8	FSM	ENSMUSG00000004038.10	ENSMUST00000004136.10	1311	8	110	0	110	0	multi-exon	FALSE	canonical	3	154	junction_5	50.6947648547014	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876489	107871011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875081_107875164_107875451_107875517_107876078_107876155_107876420
ENSMUST00000004137.11	chr3	-	1377	8	FSM	ENSMUSG00000004035.13	ENSMUST00000004137.11	1377	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	2.49897938350513	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTTTTCTTTGGTCGG	NA	False	NA	-7	True	NA	NA	NA	107839133	107833649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107834297_107836185_107836297_107836378_107836475_107837589_107837691_107837788_107837871_107838143_107838209_107838630_107838707_107838934
ENSMUST00000004140.11	chr3	-	1289	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_3	56.1666616201374	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTGTCTTTTTCT	6583	False	NA	-4	True	AATAAA	-18	NA	107925289	107919570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ENSMUST00000004143.3	chr11	-	5062	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	7.16386680880661	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGAGTCCTGTTTCCTTT	NA	False	NA	0	True	AATAAA	-21	NA	100741550	100671556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ENSMUST00000004156.10	chr19	+	3898	12	FSM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	25.7338571721901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5739064	5752893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5739295_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ENSMUST00000004172.15	chr16	+	1730	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACCTGTGATTTTTCCT	NA	False	NA	9	True	CATAAA	-17	NA	4544226	4584606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUST00000004172.15-0	chr16	+	1237	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	0	493	0	0	multi-exon	FALSE	canonical	3	381	junction_2	14.4277510374971	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCTAACAGCATTT	NA	False	NA	14	True	AATAAA	-15	NA	4544226	4584113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUST00000004173.12	chr16	-	3953	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTTGGCTCTATACT	NA	False	NA	-3	True	TATAAA	-21	NA	4607854	4583324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUST00000004173.12-0	chr16	-	2020	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	55	1878	0	0	multi-exon	FALSE	canonical	3	434	junction_5	28.1240110937256	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	False	NA	-19	True	ATTAAA	-21	NA	4607799	4585202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUST00000004200.9	chr9	+	1111	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATACAGCTTATAAAAAG	NA	False	NA	3	True	AATAAA	-27	NA	14411912	14421873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUST00000004200.9-0	chr9	+	869	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	30	212	0	0	multi-exon	FALSE	canonical	3	777	junction_1	58.5484130157826	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCAATTTGACTTTTT	NA	False	NA	13	True	ATTAAA	-13	NA	14411942	14421661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUST00000004201.8	chr9	-	6119	67	FSM	ENSMUSG00000004098.8	ENSMUST00000004201.8	6119	67	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_62	3.84063264799209	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTTTCTCTTTAAAAT	1603	False	NA	-2	True	AATAAA	-21	NA	20726363	20681345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20682275_20682366_20682607_20682882_20682952_20683403_20683517_20683600_20683800_20684380_20684435_20685189_20685226_20685309_20685364_20685611_20685720_20685856_20685911_20686326_20686381_20686528_20686637_20686761_20686816_20687129_20687184_20687387_20687442_20687608_20687663_20688287_20688396_20689772_20689827_20689960_20690015_20690096_20690151_20690311_20690366_20691196_20691305_20693103_20693158_20693782_20693837_20693920_20694029_20694779_20694888_20695964_20696019_20696441_20696532_20696668_20696777_20696868_20696923_20697494_20697549_20697646_20697701_20698385_20698431_20698556_20698611_20698826_20698872_20699846_20699901_20703940_20703995_20704805_20704914_20705006_20705061_20705242_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
ENSMUST00000004202.17	chr9	-	5367	39	FSM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_35	116.269340570878	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864275	20818504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ENSMUST00000004203.6	chr9	+	1670	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_9	65.2172523186925	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799470	20803474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ENSMUST00000004206.10	chr9	-	1101	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	0	0	0	0	multi-exon	FALSE	canonical	3	2112	junction_10	212.212370044727	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5139	False	NA	-1	True	AGTAAA	-16	NA	20809919	20805644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ENSMUST00000004208.7	chr2	+	3339	5	FSM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.11803398874989	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACCCACACTGTGTGCTG	NA	False	NA	NA	False	AATAAA	-21	NA	33106080	33137729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_33106466_33118186_33119045_33132211_33132406_33133690_33133962_33136098
ENSMUST00000004222.14	chr16	+	4218	25	FSM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_15	30.9156277902725	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18695815	18789059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ENSMUST00000004232.10	chr3	+	1492	9	FSM	ENSMUSG00000074207.11	ENSMUST00000004232.10	1492	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.01817411691241	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTTCTGTGAAACCT	NA	False	NA	NA	False	AATAAA	-28	NA	137983254	137996459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137983498_137985491_137985594_137986134_137986274_137988196_137988285_137988375_137988596_137992452_137992714_137994509_137994646_137995562_137995702_137996295
ENSMUST00000004281.10	chr10	-	6129	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	3.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCACCCCTTTTTCTA	NA	False	NA	-7	True	AATAAA	-19	NA	118705054	118691507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_118697059_118704054_118704204_118704625
ENSMUST00000004281.10-0	chr10	-	3820	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	0	2309	0	-2309	multi-exon	FALSE	canonical	3	29	junction_2	3.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTGTCATTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	118705054	118693816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_118697059_118704054_118704204_118704625
ENSMUST00000004294.12	chr15	+	3218	18	FSM	ENSMUSG00000004187.12	ENSMUST00000004294.12	3218	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	4.19342045191097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCTGGTGTTTTAA	5718	False	NA	NA	False	ATTAAA	-19	NA	76544765	76552396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76546873_76546981_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ENSMUST00000004316.15	chr10	+	2654	14	FSM	ENSMUSG00000004207.15	ENSMUST00000004316.15	2654	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	282.946207278023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGCCTTGTGTCTCT	6990	False	NA	NA	False	AATAAA	-16	NA	60113449	60138376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134870_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUST00000004326.4	chrX	+	6943	33	FSM	ENSMUSG00000031398.14	ENSMUST00000004326.4	6943	33	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_6	7.59085592999894	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTGTTTCCACTCAGAT	NA	False	NA	NA	False	NA	NA	NA	73372671	73388295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ENSMUST00000004327.11	chrX	-	2652	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_8	19.8990507869653	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTTGTTCTTTTC	NA	False	NA	-6	True	ATTAAA	-18	NA	73472800	73453088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ENSMUST00000004343.7	chr3	+	2540	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	25	1845	0	-845	multi-exon	FALSE	canonical	3	38	junction_2	3.66606055596467	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGTTGTACTGTGACTTA	NA	False	NA	9	True	NA	NA	NA	99048408	99125674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
ENSMUST00000004375.16	chr6	+	1318	10	FSM	ENSMUSG00000004264.18	ENSMUST00000004375.16	1318	10	0	0	0	0	multi-exon	FALSE	canonical	1	924	junction_9	595.782978965236	1967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGAGTGTGTAC	NA	False	NA	24	True	AATAAA	-25	NA	124689298	124693913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693387_124693394_124693568
ENSMUST00000004377.15	chr6	-	2308	15	FSM	ENSMUSG00000004266.16	ENSMUST00000004377.15	2308	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	38.4405185889545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGCCCCTTGTATC	9009	False	NA	0	True	AATAAA	-28	NA	124715588	124697669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
ENSMUST00000004378.15	chr6	-	2795	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGGCTGAACTAAGGAT	9866	False	NA	-3	True	NA	NA	NA	124746636	124737017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ENSMUST00000004378.15-0	chr6	-	2362	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	123	310	0	0	multi-exon	FALSE	canonical	3	32	junction_11	8.77449346328266	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	9989	False	NA	-6	True	ATTAAA	-17	NA	124746513	124737327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ENSMUST00000004379.8	chr6	-	1034	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_5	105.298433036774	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	False	NA	-14	True	TATAAA	-19	NA	124689141	124681343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUST00000004381.14	chr6	+	2281	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	0	0	0	0	multi-exon	TRUE	canonical	3	738	junction_2	58.4776785524946	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATACAGTGTTGTCTC	NA	False	NA	NA	False	AATAAA	-25	NA	124639989	124681381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUST00000004392.12	chr6	+	2189	9	FSM	ENSMUSG00000029771.13	ENSMUST00000004392.12	2189	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	3.25720355519885	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTGCCCATTTATTGAC	499	False	NA	NA	False	AATAAA	-12	NA	29526623	29537318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29526774_29531124_29531331_29533950_29534141_29534533_29534593_29535039_29535074_29535251_29535510_29535723_29536117_29536202_29536322_29536538
ENSMUST00000004396.13	chr6	+	703	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	NA	False	NA	37	True	ATTAAA	-19	NA	29467716	29470511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29467974_29470065
ENSMUST00000004396.13-0	chr6	+	643	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	60	0	60	0	multi-exon	FALSE	canonical	3	1924	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTGGTATGGATACG	-15	True	NA	37	True	ATTAAA	-19	NA	29467776	29470511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29467974_29470065
ENSMUST00000004428.14	chrX	-	8390	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	7.74596669241483	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGTCTGTTTCTGAAGA	NA	False	NA	0	True	AATAAA	-22	NA	7054953	7020048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ENSMUST00000004430.14	chr8	-	4175	14	FSM	ENSMUSG00000004319.16	ENSMUST00000004430.14	4175	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	79.7742376590516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCAGTTAATATTGCACA	NA	False	NA	NA	False	ATTAAA	-14	NA	61436273	61364956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ENSMUST00000004430.14-0	chr8	-	5770	14	FSM	ENSMUSG00000004319.16	ENSMUST00000004430.14	4175	14	-61	-1534	0	0	multi-exon	FALSE	canonical	3	31	junction_1	79.7742376590516	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436334	61363422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ENSMUST00000004453.9	chr13	+	1340	5	FSM	ENSMUSG00000004341.9	ENSMUST00000004453.9	1340	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.71729831301464	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGACTCTGAGTGATGT	925	False	NA	NA	False	NA	NA	NA	21496294	21503794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21496515_21497817_21497972_21501154_21501273_21501738_21501839_21503046
ENSMUST00000004470.9	chr10	-	8821	62	FSM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_48	34.745281900583	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGCCTGAAAGACTATG	NA	False	NA	-1	True	ATTAAA	-16	NA	88662666	88582468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ENSMUST00000004473.15	chr10	-	1763	6	FSM	ENSMUSG00000004359.17	ENSMUST00000004473.15	1763	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	182.911563330479	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88518885	88510633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88518836
ENSMUST00000004494.16	chr8	+	4115	19	FSM	ENSMUSG00000031622.17	ENSMUST00000004494.16	4115	19	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_6	282.896831519815	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCAGGGTCCTTCGTC	NA	False	NA	26	True	ATTAAA	-17	NA	73449915	73484829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
ENSMUST00000004497.11	chr8	-	3669	15	FSM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_14	8.74000887310996	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	False	NA	-8	True	AATAAA	-17	NA	74079184	73541226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
ENSMUST00000004507.11	chr11	-	1956	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_7	74.9654752883426	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4489	False	NA	-2	True	NA	NA	NA	6217772	6208918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ENSMUST00000004508.13	chr11	-	2003	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTCTCCCTTTGTTTT	5338	False	NA	NA	False	ATTAAA	-24	NA	6224870	6220368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUST00000004508.13-0	chr11	-	1653	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	5	345	0	-345	multi-exon	FALSE	canonical	3	418	junction_4	49.7663289785373	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAATAATAGAT	5343	False	NA	-1	True	AATAAA	-16	NA	6224865	6220713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUST00000004554.14	chr7	+	761	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	14799	junction_5	1601.25238485381	4258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGTGTGCTTGTCTA	NA	False	NA	38	True	AATAAA	-24	NA	12656216	12660613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUST00000004560.12	chr6	-	2189	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTCACCAGTTATCATAA	NA	False	NA	NA	False	AGTAAA	-16	NA	120893814	120869814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ENSMUST00000004560.12-0	chr6	-	1906	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	17	266	0	-266	multi-exon	FALSE	canonical	3	795	junction_5	85.8011654932496	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120893797	120870080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ENSMUST00000004565.15	chr1	-	2289	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_4	66.8169140263152	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGCCCTTTTTCCTGCAT	NA	False	NA	-4	True	AATAAA	-21	NA	119432524	119398034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ENSMUST00000004574.14	chr16	+	1927	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	0	0	0	0	multi-exon	FALSE	canonical	3	939	junction_3	70.1998909640038	886	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTATCTGTCCAAG	NA	False	NA	30	True	AATAAA	-34	NA	22676594	22691138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUST00000004576.8	chr16	-	2803	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	24.7526539496479	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGCCAGAGTTGGTT	NA	False	NA	NA	False	AATAAA	-21	NA	22676419	22631963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUST00000004614.15	chr7	+	3591	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	17.0617127163813	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGACTATAGCGTGT	NA	False	NA	27	True	NA	NA	NA	12568687	12584504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUST00000004634.7	chr11	-	3872	8	FSM	ENSMUSG00000020142.13	ENSMUST00000004634.7	3872	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	7790	False	NA	-5	True	NA	NA	NA	20282684	20252204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ENSMUST00000004646.13	chr5	-	3491	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_1	46.3810306051946	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046819	113980496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ENSMUST00000004673.15	chr14	-	2099	16	FSM	ENSMUSG00000004558.16	ENSMUST00000004673.15	2099	16	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_14	42.8779145429854	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCGGGTCTGAATGCGCC	NA	False	NA	1	True	AATAAA	-28	NA	52150887	52142727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150779
ENSMUST00000004683.13	chr8	+	2065	14	FSM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_8	29.619280463035	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3550456	3565232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ENSMUST00000004684.13	chr8	+	5271	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	0	0	0	0	multi-exon	TRUE	canonical	3	218	junction_1	25.5526180280738	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443037	3506601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ENSMUST00000004686.13	chr8	-	1122	5	FSM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	35	1713	0	-1710	multi-exon	FALSE	canonical	3	21	junction_1	4.14578098794425	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTGTGCATGAGGT	NA	False	NA	-3	True	ATTAAA	-15	NA	3517645	3508817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
ENSMUST00000004715.2	chrX	-	2015	15	FSM	ENSMUSG00000061778.11	ENSMUST00000004715.2	2015	15	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	10.321366781822	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGTAGTCTGC	NA	False	NA	NA	False	AATACA	-40	NA	163763331	163721204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_163721689_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ENSMUST00000004729.5	chr7	+	893	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	117.194539121923	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGATGTCCTTGTTT	1908	False	NA	52	True	AATAAA	-35	NA	43093506	43107224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
ENSMUST00000004745.9	chr8	+	1847	19	FSM	ENSMUSG00000004626.15	ENSMUST00000004745.9	1847	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_17	74.555886735479	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4602	False	NA	16	True	AATAAA	-22	NA	3681169	3692795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691894_3692056_3692645
ENSMUST00000004756.14	chr8	+	2244	9	FSM	ENSMUSG00000004637.16	ENSMUST00000004756.14	2244	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	27.9013328534678	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTGTCTGAAGTGTAT	NA	False	NA	12	True	AATAAA	-15	NA	115166394	116079447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_116078376
ENSMUST00000004780.16	chr9	-	3785	8	FSM	ENSMUSG00000004661.16	ENSMUST00000004780.16	3785	8	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	15.4906159875413	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	57741519	57697795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898
ENSMUST00000004784.11-1	chr10	+	1749	7	FSM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	39	672	0	-672	multi-exon	FALSE	canonical	3	82	junction_2	7.8616509433805	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTACATTCCTGAGTT	1808	False	NA	7	True	NA	NA	NA	79824456	79831224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
ENSMUST00000004786.10	chr10	-	1148	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	0	0	0	0	multi-exon	FALSE	canonical	3	2552	junction_2	153.800375667797	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5515	False	NA	-19	True	ATTAAA	-19	NA	79875629	79871782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUST00000004868.6	chr11	-	1411	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	5.18544972870135	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTTCATTTCCTCTT	NA	False	NA	1	True	AATAAA	-17	NA	4045445	4041479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ENSMUST00000004910.12	chr12	+	1605	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_7	13.1661284657074	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGAAAGGGCCCCAAAC	NA	False	NA	NA	False	AATAAA	-21	NA	85266254	85273402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ENSMUST00000004920.4	chr11	-	5743	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	4.53666848543571	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTTCATATCATGTA	NA	False	NA	NA	False	AATAAA	-22	NA	61745899	61666474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ENSMUST00000004949.8	chr2	+	6169	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	13.2603444409969	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGCTGGTTATGTAGAAT	NA	False	NA	NA	False	TATAAA	-14	NA	101508784	101532014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ENSMUST00000004955.14	chr11	-	1837	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_11	44.7137821487915	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	242	False	NA	-7	True	AATAAA	-22	NA	61652888	61620479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
ENSMUST00000004965.8	chr16	-	1872	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_5	16.0573970493352	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCCTAACGCGCATCA	NA	False	NA	-8	True	AATAAA	-19	NA	65359612	65336013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
ENSMUST00000004968.11	chr5	+	3280	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTGTGAGTGTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	137015872	137025502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUST00000004968.11-0	chr5	+	2598	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	575	107	118	-107	multi-exon	FALSE	canonical	3	142	junction_1	18.3673926051335	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTCCGTGAGTCCAAT	NA	False	NA	15	True	AATAAA	-16	NA	137016447	137025395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUST00000004985.11	chr17	+	5764	13	FSM	ENSMUSG00000063952.17	ENSMUST00000004985.11	7169	13	0	1405	0	0	multi-exon	FALSE	canonical	0	0	junction_5	90.6136487143815	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29020063	29057518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29020336_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ENSMUST00000004987.17	chr17	-	2007	12	FSM	ENSMUSG00000004865.17	ENSMUST00000004987.17	2007	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	191.258208920137	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28826166	28808563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057
ENSMUST00000004990.14	chr17	+	3562	12	FSM	ENSMUSG00000053436.16	ENSMUST00000004990.14	3562	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	126.485422019579	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTCAGGTTTATTC	5064	False	NA	13	True	AATAAA	-20	NA	28910302	28967380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
ENSMUST00000005003.12	chr1	-	3510	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_6	154.844109428974	4549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669944	181642899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ENSMUST00000005015.10	chr3	-	2099	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_5	35.6401770789964	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTGTCTGGATCTCAGA	2299	False	NA	1	True	AATAAA	-27	NA	87792915	87766209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
ENSMUST00000005016.16	chr3	-	2492	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	29.6922995583236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTGGAGCCTGTGTCAC	9443	False	NA	NA	False	AATAAA	-13	NA	87837451	87830211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ENSMUST00000005016.16-0	chr3	-	1739	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	0	753	0	0	multi-exon	FALSE	canonical	3	36	junction_2	29.6922995583236	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9443	False	NA	-22	True	TATAAA	-27	NA	87837451	87830964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ENSMUST00000005017.15	chr3	+	2245	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	0	0	0	0	multi-exon	FALSE	canonical	3	2720	junction_5	175.133549041867	4890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87813627	87823439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ENSMUST00000005019.6	chr3	+	931	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTCCCTGAG	8831	False	NA	8	True	ATTAAA	-19	NA	87855972	87860683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
ENSMUST00000005041.15	chr7	+	2183	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	0	0	0	0	multi-exon	FALSE	canonical	3	1559	junction_7	130.155406157663	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCTCATCTGTGTCCA	72	False	NA	33	True	ATTAAA	-23	NA	5065141	5082937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ENSMUST00000005053.14	chr17	-	948	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	16.0485374896143	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGGGGGCGTGTGTGTCTG	3468	False	NA	-8	True	NA	NA	NA	5490518	5461144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
ENSMUST00000005057.7	chr10	+	2832	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	0	0	0	0	multi-exon	TRUE	canonical	3	459	junction_3	51.2387521532504	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATCAGACAGTGAGCA	5450	False	NA	NA	False	NA	NA	NA	80905868	80918393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ENSMUST00000005064.14	chr10	-	2571	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_2	40.6104666311531	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGGTTTCTCTGTAG	NA	False	NA	2	True	AATAAA	-37	NA	81003757	80989099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ENSMUST00000005066.9	chr9	-	2436	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	0	0	0	0	multi-exon	TRUE	canonical	3	469	junction_6	51.6454257412987	771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTGGCACACCTT	NA	False	NA	-13	True	AATAAA	-38	NA	64160913	64093051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ENSMUST00000005067.6	chr10	-	1969	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_9	245.943486083912	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTCTGCTTCCTGTGT	4772	False	NA	-11	True	AATAAA	-17	NA	80896012	80879908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
ENSMUST00000005072.10	chr5	+	2562	11	FSM	ENSMUSG00000004947.16	ENSMUST00000005072.10	2562	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	46.0292298436548	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCATCTGTTGGGAAG	8536	False	NA	8	True	AATAAA	-13	NA	136023730	136061718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057355_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUST00000005073.13	chr5	+	1323	8	FSM	ENSMUSG00000004948.13	ENSMUST00000005073.13	1323	8	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	3.97953950776689	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGTGGTTTAATG	NA	False	NA	NA	False	AATAAA	-13	NA	136008952	136017478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136009297_136011492_136011612_136013015_136013120_136013201_136013386_136014398_136014517_136016108_136016201_136016325_136016463_136017253
ENSMUST00000005077.7	chr5	+	903	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	2181	junction_2	11	524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCCAGAGTTATTA	NA	False	NA	7	True	AATAAA	-25	NA	135916772	135918417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135917289_135917902_135917967_135918094
ENSMUST00000005103.12	chr6	+	2544	4	FSM	ENSMUSG00000029832.17	ENSMUST00000005103.12	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.05480466765633	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACAAAAATATTTTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	51409649	51435748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_51410394_51427946_51428124_51433573_51433658_51434209
ENSMUST00000005108.10	chr6	+	8630	28	FSM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	0	2314	0	-2314	multi-exon	FALSE	canonical	3	38	junction_13	7.14421307921747	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCACTTCTTCGTTATTA	NA	False	NA	18	True	ATTAAA	-33	NA	120341084	120419221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
ENSMUST00000005120.12	chr8	-	1441	9	FSM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	76.6823806359714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCTTGTTTCTAAACT	NA	False	NA	-22	True	ATTAAA	-15	NA	84996976	84984929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ENSMUST00000005173.11	chr11	-	4189	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	0	168	0	-152	multi-exon	FALSE	canonical	2	7	junction_4	3.49927106111883	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAACAGTGCCAGCTGTTG	6136	False	NA	NA	False	NA	NA	NA	119246362	119234475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ENSMUST00000005185.8	chr10	+	603	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	0	0	0	0	multi-exon	TRUE	canonical	3	3631	junction_2	117.5	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTCCTTAGTTTT	NA	False	NA	23	True	AATATA	-18	NA	78261502	78263456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_78261692_78262760_78262863_78263144
ENSMUST00000005188.14	chr5	-	2848	9	FSM	ENSMUSG00000005057.14	ENSMUST00000005188.14	2848	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	2.73861278752583	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTGCTCTCCTGTGGTC	2502	False	NA	NA	False	ATTAAA	-20	NA	136273757	136247002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136248007_136248495_136248668_136250701_136250911_136253008_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
ENSMUST00000005233.12	chr2	+	5212	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_24	13.8429307338417	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTTCCATTTGCA	NA	False	NA	9	True	AATAAA	-15	NA	118219098	118305715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ENSMUST00000005234.13	chr5	-	3089	15	FSM	ENSMUSG00000005103.13	ENSMUST00000005234.13	3089	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	233.56139122164	1801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719149	38684155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ENSMUST00000005256.14	chr15	-	2889	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_13	7.67854152818099	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTCTTTTCCTCTCC	NA	False	NA	0	True	AATAAA	-18	NA	66841489	66801166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
ENSMUST00000005279.8	chr14	+	3352	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	0	0	0	0	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	3281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGCCTTCTTGACCC	NA	False	NA	22	True	AATAAA	-18	NA	99536126	99552472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ENSMUST00000005279.8-0	chr14	+	1764	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	0	1588	0	-1588	multi-exon	FALSE	canonical	3	3464	junction_1	114.952163963972	2139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGGAACTGGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	99536126	99550884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ENSMUST00000005292.15	chr8	+	894	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	83	523	0	0	multi-exon	FALSE	canonical	3	3496	junction_3	236.69169820676	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAAGTCTGTGTTGGTGT	NA	False	NA	13	True	AATAAA	-13	NA	85696322	85700940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000005336.9	chr11	-	2313	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_10	82.7371742326265	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8530	False	NA	-5	True	AATAAA	-17	NA	69572672	69563940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ENSMUST00000005365.15	chr2	-	1352	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_6	34.6121365997536	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036538	69024238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ENSMUST00000005371.12	chr11	+	1772	11	FSM	ENSMUSG00000059552.14	ENSMUST00000005371.12	1772	11	0	0	0	0	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471184	69482699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ENSMUST00000005394.13	chr16	+	1996	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGATATGGTATGTTGT	NA	False	NA	10	True	AATAAA	-20	NA	18631043	18654011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUST00000005394.13-0	chr16	+	1062	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	27	907	0	-50	multi-exon	FALSE	canonical	3	393	junction_10	35.0072011482124	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTTACAGTTACTGGC	NA	False	NA	3	True	AATAAA	-14	NA	18631070	18653104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUST00000005399.10	chr11	-	3220	5	FSM	ENSMUSG00000005267.14	ENSMUST00000005399.10	3220	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGGAAGACCTGAAAAG	NA	False	NA	NA	False	AGTAAA	-8	NA	62619919	62604112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_62606203_62615622_62615710_62616073_62616201_62618375_62618480_62619107
ENSMUST00000005406.12	chr16	-	3176	16	FSM	ENSMUSG00000022892.12	ENSMUST00000005406.12	3176	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	15.6480740738987	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGACGTTTCTTTGAAG	7331	False	NA	-6	True	AATAAA	-19	NA	84970646	84751330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUST00000005431.6	chr5	-	5272	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTACAGTGGTGTGTCC	NA	False	NA	NA	False	AATAAA	-20	NA	33940161	33897016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ENSMUST00000005431.6-0	chr5	-	2544	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	80	2648	0	213	multi-exon	FALSE	canonical	3	324	junction_8	46.4800014258216	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCAATTTTTAATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	33940081	33899664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ENSMUST00000005452.6	chr13	+	3324	18	FSM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	3.40364144505634	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTGTGGCAGGGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	55300452	55316572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55300741_55303250_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
ENSMUST00000005487.12	chr15	-	1298	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_2	92.120693778446	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGCTGTTCTGTGGGC	14	True	NA	-5	True	AATAAA	-19	NA	77813206	77799246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
ENSMUST00000005493.14	chr15	-	4163	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	8.52447456836295	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	8740248	8663607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ENSMUST00000005503.5	chr17	+	4251	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	0	0	0	0	multi-exon	FALSE	canonical	3	2207	junction_2	252.867310151411	5222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282489	88298320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUST00000005504.15	chr17	-	4019	23	FSM	ENSMUSG00000005371.16	ENSMUST00000005504.15	4019	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_20	20.0647711505094	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGAATTTACCACC	NA	False	NA	0	True	AATAAA	-17	NA	88372719	88298286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436
ENSMUST00000005507.10	chr5	+	3622	17	FSM	ENSMUSG00000005373.14	ENSMUST00000005507.10	3622	17	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_13	3.60067268020852	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGAGGCAGGTTTTTAA	3434	False	NA	NA	False	NA	NA	NA	135135771	135167236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135136070_135142480_135142588_135150359_135150443_135150589_135150680_135150923_135150969_135152503_135152706_135152790_135152872_135157366_135157552_135161168_135161716_135161962_135162031_135162105_135162263_135162397_135162514_135162607_135162728_135162847_135162976_135163340_135163465_135164204_135164335_135166095
ENSMUST00000005532.9	chr13	+	6091	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	184.261632008595	1376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGTGTTTTTGCTGT	NA	False	NA	12	True	ATTAAA	-27	NA	13612135	13686854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUST00000005548.8	chr8	+	1569	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	104.358456772798	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAAGTGCATTCATGTC	NA	False	NA	10	True	AATAAA	-19	NA	75820248	75827217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ENSMUST00000005583.12	chr7	-	901	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	0	0	0	0	multi-exon	TRUE	canonical	3	245	junction_5	66.0714764478591	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	8499	False	NA	-2	True	ATTAAA	-15	NA	24997411	24994473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
ENSMUST00000005600.6	chr8	+	4172	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	9.14002188181188	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACTGATGACGAGAGCA	NA	False	NA	21	True	AATAAA	-17	NA	84793464	84823621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ENSMUST00000005601.9	chr8	-	2664	14	FSM	ENSMUSG00000005465.10	ENSMUST00000005601.9	2664	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	6.10848667572056	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCAGAGTGCCTTAAC	5259	False	NA	NA	False	NA	NA	NA	84769218	84756922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
ENSMUST00000005606.8	chr8	+	2276	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_8	27.9342260972865	1048	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCGCTGGTTTTCCCGA	452	False	NA	NA	False	AATAAA	-19	NA	84699621	84723072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ENSMUST00000005607.9	chr8	+	1788	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_2	3.39934634239519	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTTTTTCTCTC	5716	False	NA	23	True	AATAAA	-16	NA	84682135	84696826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
ENSMUST00000005616.16	chr8	-	6662	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_13	29.0604187256126	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGGAAAATGTGAGC	NA	False	NA	-9	True	AATAAA	-14	NA	84425808	84393164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ENSMUST00000005616.16-0	chr8	-	3099	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	0	3563	0	0	multi-exon	FALSE	canonical	3	231	junction_13	29.0604187256126	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84425808	84396727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ENSMUST00000005620.10	chr8	+	2996	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_2	45.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATACGAGGTGCTCGGCT	NA	False	NA	NA	False	AATAAA	-23	NA	84334821	84339282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84335172_84336442_84337024_84337217
ENSMUST00000005620.10-1	chr8	+	2246	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	0	750	0	-750	multi-exon	FALSE	canonical	3	562	junction_2	45.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGCAGTCCTTCGACTC	NA	False	NA	10	True	ATTAAA	-19	NA	84334821	84338532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84335172_84336442_84337024_84337217
ENSMUST00000005643.14	chr2	+	4830	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	2317	False	NA	8	True	ATTAAA	-8	NA	90770741	90849835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ENSMUST00000005643.14-0	chr2	+	2334	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	61	2435	0	-2435	multi-exon	FALSE	canonical	3	193	junction_2	185.405677653416	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGGCTCCTGAACAC	2378	False	NA	NA	False	AATAAA	-27	NA	90770802	90847400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ENSMUST00000005647.4	chr2	-	1046	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	0	0	0	0	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	90735171	90724979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ENSMUST00000005647.4-0	chr2	-	861	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	185	0	0	0	multi-exon	FALSE	canonical	3	1877	junction_6	40.2105569333339	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	90734986	90724979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ENSMUST00000005651.13	chr5	+	2636	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_9	23.2776478384069	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	1901	False	NA	14	True	AATAAA	-14	NA	135717889	135764180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ENSMUST00000005671.10	chr7	+	5277	21	FSM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	-934	7066	-934	434	multi-exon	FALSE	canonical	2	11	junction_1	3.59826347006441	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCAGCTTTTTATTTC	NA	False	NA	16	True	AGTAAA	-29	NA	67601640	67876350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
ENSMUST00000005705.8	chr7	+	3245	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	0	0	0	0	multi-exon	FALSE	canonical	3	3307	junction_7	380.550172242439	7529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758078	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUST00000005711.6	chr7	-	949	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	0	0	0	0	multi-exon	FALSE	canonical	3	2610	junction_5	213.695671458268	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	6935	False	NA	-11	True	AATAAA	-17	NA	12768734	12765940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
ENSMUST00000005714.14	chr7	-	1472	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	8443	False	NA	-3	True	ATTAAA	-17	NA	12772200	12769164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ENSMUST00000005714.14-0	chr7	-	1079	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	393	0	-134	0	multi-exon	FALSE	canonical	3	1870	junction_5	193.215320303541	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	8836	False	NA	-3	True	ATTAAA	-17	NA	12771807	12769164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ENSMUST00000005749.6	chr7	+	4300	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_8	10.558616149856	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCCTGTGTGTCCTCT	499	False	NA	31	True	AATAAA	-17	NA	110628157	110655584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUST00000005768.8	chr3	-	3480	15	FSM	ENSMUSG00000028126.17	ENSMUST00000005768.8	3480	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	13.4545720929386	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTCTAGCAATCATT	1349	False	NA	-27	True	AATAAA	-18	NA	95014090	94965879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990134_95013686
ENSMUST00000005798.9	chr12	-	1928	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_2	126.191832929968	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTGAAGGTCTTTTCT	NA	False	NA	-10	True	AATAAA	-20	NA	54842488	54793133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ENSMUST00000005810.9	chr6	-	2085	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	0	0	0	0	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	2189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTGTCTCAGTCAGAC	NA	False	NA	2	True	AATAAA	-35	NA	83294588	83282672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ENSMUST00000005810.9-0	chr6	-	1793	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	0	292	0	-292	multi-exon	FALSE	canonical	3	2400	junction_5	123.349677166756	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTGTGTGTCTGTTTT	NA	False	NA	-3	True	TTTAAA	-23	NA	83294588	83282964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ENSMUST00000005815.7	chr5	+	5214	21	FSM	ENSMUSG00000005672.13	ENSMUST00000005815.7	5214	21	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_9	204.916348786523	2857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	766	False	NA	14	True	NA	NA	NA	75735614	75817382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ENSMUST00000005817.9	chr1	-	1549	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	63	3100	0	-748	multi-exon	FALSE	canonical	3	83	junction_9	16.1314048434171	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9572	False	NA	92	True	AAAAAG	-13	NA	171050020	171046679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ENSMUST00000005825.8	chr10	+	4445	26	FSM	ENSMUSG00000005682.10	ENSMUST00000005825.8	4445	26	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_17	49.8603810655314	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139203	128157222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUST00000005826.9	chr10	+	2926	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	0	0	0	0	multi-exon	TRUE	canonical	3	1246	junction_9	132.722869167299	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	NA	False	NA	18	True	AATAAA	-18	NA	128173602	128198348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ENSMUST00000005830.15	chr3	+	1467	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATATGTT	4929	False	NA	NA	False	NA	NA	NA	103078970	103086468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUST00000005830.15-0	chr3	+	1048	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	94	325	0	0	multi-exon	FALSE	canonical	3	3472	junction_4	166.601987449797	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5023	False	NA	48	True	AATAAA	-16	NA	103079064	103086143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUST00000005841.16	chr8	+	3782	12	FSM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_10	73.0190736997323	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363210	106409554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ENSMUST00000005862.9	chr16	-	2247	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_5	11.6010057035299	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAGTTATTGAGGATG	NA	False	NA	0	True	AATAAA	-22	NA	4377718	4362524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
ENSMUST00000005923.7	chr3	-	954	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	0	229	0	0	multi-exon	FALSE	canonical	3	1538	junction_1	134.402380931292	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGGATTTTGTGTTT	NA	False	NA	-3	True	AATAAA	-21	NA	94794272	94791632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ENSMUST00000005952.11	chr2	-	5458	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	3.62476052848859	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTATTTTCATTGA	NA	False	NA	NA	False	ATTAAA	-25	NA	122544559	122523152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
ENSMUST00000005954.9	chr2	+	3484	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGTTTATCAGACACCG	8269	False	NA	15	True	AATAAA	-18	NA	122580422	122591395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
ENSMUST00000005954.9-0	chr2	+	2081	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	27	1376	0	0	multi-exon	FALSE	canonical	3	133	junction_2	4.54835134966506	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGCTGGCGATTCTTTT	8296	False	NA	4	True	AATAAA	-16	NA	122580449	122590019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
ENSMUST00000005964.7	chr3	+	1604	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	0	0	0	0	multi-exon	FALSE	canonical	3	1845	junction_1	151.305103598656	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGTATTCAGAAAACTT	4924	False	NA	NA	False	AATAAA	-18	NA	138148853	138161260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ENSMUST00000005975.8	chr17	-	2064	17	FSM	ENSMUSG00000005823.10	ENSMUST00000005975.8	2064	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_12	32.0784560686764	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATAAAGAAAAAGTG	NA	False	NA	-59	True	CATAAA	-13	NA	57554689	57541971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550114_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUST00000006027.7	chr18	-	2852	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTAAAATGTTGTTTT	5561	False	NA	-7	True	AATAAA	-27	NA	34506422	34477937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUST00000006027.7-0	chr18	-	745	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	0	2107	0	0	multi-exon	FALSE	canonical	3	477	junction_1	38.3495436739474	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGCCTTTGTTGTC	5561	False	NA	-5	True	ATTAAA	-18	NA	34506422	34480044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUST00000006035.13	chr2	+	1377	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_4	74.7846445171437	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155849964	155860199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUST00000006037.13	chr1	-	4897	23	FSM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	7.80826538127789	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGACTTCATCCCCAT	NA	False	NA	NA	False	NA	NA	NA	13444307	13212698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ENSMUST00000006037.13-0	chr1	-	8213	23	FSM	ENSMUSG00000005886.15	ENSMUST00000006037.13	4897	23	54	-3370	0	0	multi-exon	FALSE	canonical	3	44	junction_3	7.80826538127789	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCGATACGGTATCTTC	NA	False	NA	1	True	AATAAA	-42	NA	13444253	13209328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13235119_13235327_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ENSMUST00000006046.5	chr6	-	1384	3	FSM	ENSMUSG00000005892.5	ENSMUST00000006046.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	3.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGCTTTGCTCTTCTG	NA	False	NA	-13	True	AATAAA	-15	NA	92221631	92219041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92220107_92220652_92220869_92221528
ENSMUST00000006053.13	chr16	+	3293	20	FSM	ENSMUSG00000005899.15	ENSMUST00000006053.13	4623	20	3	1327	0	154	multi-exon	FALSE	canonical	2	4	junction_11	83.2673829522215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGGCTGAATCTTTA	NA	False	NA	6	True	AATAAA	-19	NA	17437220	17461365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17453345_17453433_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUST00000006071.14	chr11	-	2789	5	FSM	ENSMUSG00000005917.16	ENSMUST00000006071.14	2789	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGCTCTTCTAATTCCA	NA	False	NA	NA	False	AATAAA	-25	NA	21951615	21944763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_21947059_21948369_21948522_21949379_21949586_21951121_21951190_21951547
ENSMUST00000006103.9	chr11	-	2570	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	9.23525852372309	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAACGTTTACTAGA	4465	False	NA	0	True	ATTAAA	-24	NA	73089868	73074421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ENSMUST00000006104.10	chr11	+	2395	13	FSM	ENSMUSG00000005950.15	ENSMUST00000006104.10	2395	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.62476052848859	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGACCTGTGCCCCA	3368	False	NA	12	True	GATAAA	-22	NA	73051246	73063511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_73051560_73055681_73055833_73056365_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
ENSMUST00000006112.7	chr16	+	4185	16	FSM	ENSMUSG00000005958.16	ENSMUST00000006112.7	4185	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_8	11.1167541225945	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGCCCCTGCTCGTTCT	NA	False	NA	11	True	AATAAA	-14	NA	21023504	21042054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ENSMUST00000006123.11	chr3	-	2631	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	22.9474036294596	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCCCGTGGGTCTTTTA	6441	False	NA	-5	True	AATAAA	-16	NA	94566178	94520063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
ENSMUST00000006128.7	chr2	-	2720	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	0	0	0	0	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACAAGCTGGAGTTATCA	NA	False	NA	NA	False	NA	NA	NA	105229664	105216635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ENSMUST00000006128.7-0	chr2	-	2168	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	-86	638	-86	0	multi-exon	FALSE	canonical	3	1454	junction_3	103.827549330609	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229750	105217273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ENSMUST00000006137.9	chr16	-	2320	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	0	0	0	0	multi-exon	TRUE	canonical	3	963	junction_15	112.803285922348	1443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	False	NA	-3	True	ATTAAA	-22	NA	3895691	3857834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUST00000006178.5	chr7	+	1630	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	5.62609034427847	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTCTGGCAAGCA	NA	False	NA	32	True	NA	NA	NA	15853819	15861441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ENSMUST00000006181.7	chr7	+	2517	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	0	0	0	0	multi-exon	TRUE	canonical	3	1130	junction_8	65.9754499795189	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCACATCTCATTCAT	NA	False	NA	2	True	AATAAA	-17	NA	15832382	15851900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUST00000006181.7-0	chr7	+	1522	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	150	845	0	391	multi-exon	FALSE	canonical	3	1130	junction_8	65.9754499795189	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGCTGTCCCTTTGA	NA	False	NA	32	True	AATAAA	-22	NA	15832532	15851055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUST00000006209.5	chr18	-	695	5	FSM	ENSMUSG00000006050.13	ENSMUST00000006209.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	590.993443280042	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGACTTCCTATGCCTT	NA	False	NA	NA	False	NA	NA	NA	36803338	36800481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36800713_36800843_36800947_36801704_36801902_36803056_36803183_36803300
ENSMUST00000006217.10	chr11	+	1004	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_5	23.859281341282	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTTCCCCCAGTAT	3197	False	NA	21	True	AATAAA	-43	NA	95925710	95938256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
ENSMUST00000006221.14	chr11	+	4323	23	FSM	ENSMUSG00000020128.16	ENSMUST00000006221.14	4323	23	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	46.1409984237141	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCAATGGTACAGTA	NA	False	NA	33	True	AATAAA	-29	NA	21189280	21271136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUST00000006235.9	chr14	+	4743	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	0	0	0	0	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCCTGTCATCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	63359910	63383372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUST00000006235.9-0	chr14	+	1894	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	52	2797	0	1263	multi-exon	FALSE	canonical	3	6333	junction_1	582.432086858605	7521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTGACATTGGCAGGG	NA	False	NA	17	True	AATAAA	-12	NA	63359962	63380575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUST00000006254.6	chr7	-	1416	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAAGTCTCTTGATTCC	NA	False	NA	-5	True	NA	NA	NA	29931697	29923555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUST00000006254.6-0	chr7	-	891	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	519	6	519	0	multi-exon	FALSE	canonical	3	839	junction_4	26.4529771481397	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTTGTGCAAGTCTCTT	NA	False	NA	-11	True	NA	NA	NA	29931178	29923561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUST00000006286.9	chr11	+	2679	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	22.5527847321246	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGACTCCTTTGATGGG	5439	False	NA	27	True	TATAAA	-18	NA	75521813	75539697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUST00000006293.5	chr16	+	5042	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	8	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTGTTTCAGTGTCTC	3459	False	NA	20	True	AATAAA	-27	NA	17269850	17305298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17270653_17286756_17287223_17301524
ENSMUST00000006301.11	chr5	-	2105	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	73	295	0	0	multi-exon	FALSE	canonical	3	342	junction_8	23.380722043284	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTGGGAAATGAGTG	6757	False	NA	-11	True	ATTAAA	-19	NA	136164855	136151920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ENSMUST00000006311.13	chr6	-	3076	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGAGAACTTCAACTC	1357	False	NA	-7	True	NA	NA	NA	128277776	128204105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ENSMUST00000006311.13-0	chr6	-	1698	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	340	1038	265	0	multi-exon	FALSE	canonical	3	52	junction_4	17.0405447474327	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGGAGCTAGTTTGGC	1697	False	NA	-5	True	AATAAA	-19	NA	128277436	128205143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ENSMUST00000006353.14	chr13	-	2629	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	17.6728291138937	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	30039657	29509283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ENSMUST00000006362.4	chrX	+	1010	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTCCATTGTCTTGG	NA	False	NA	14	True	AATAAA	-18	NA	36915786	36918734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
ENSMUST00000006362.4-0	chrX	+	875	4	FSM	ENSMUSG00000006200.4	ENSMUST00000006362.4	1010	4	135	0	135	0	multi-exon	FALSE	canonical	3	92	junction_1	47.588514020367	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTCCATTGTCTTGG	NA	False	NA	14	True	AATAAA	-18	NA	36915921	36918734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36916057_36916242_36916703_36917291_36917338_36918500
ENSMUST00000006367.8	chr7	+	2041	9	FSM	ENSMUSG00000006205.14	ENSMUST00000006367.8	2041	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	16.015617378047	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGCGTGCTTCTTTTAT	6622	False	NA	19	True	ATTAAA	-20	NA	130537932	130587390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
ENSMUST00000006377.13	chr4	+	2722	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_3	19.5436832648187	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGTGGTCCCTGTG	NA	False	NA	5	True	AATAAA	-15	NA	141171964	141194536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ENSMUST00000006380.5	chr4	+	1433	7	FSM	ENSMUSG00000006218.5	ENSMUST00000006380.5	1433	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	7.90393713425292	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTTGACCTGGTCTTC	7186	False	NA	13	True	ATTAAA	-19	NA	141095530	141111486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_141095636_141106988_141107105_141107629_141107666_141107912_141108007_141109637_141109821_141110054_141110166_141110698
ENSMUST00000006381.11	chr4	-	3101	9	FSM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	521.665826343839	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141325535	141303372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325393
ENSMUST00000006392.3	chr13	+	1814	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	135	1304	0	-1304	multi-exon	FALSE	canonical	3	32	junction_4	6.66874967458085	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTGACATGCCATGGTC	NA	False	NA	4	True	AATAAA	-17	NA	33211533	33224563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ENSMUST00000006424.8	chr5	+	6774	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	0	-4069	0	-2162	multi-exon	FALSE	canonical	3	27	junction_3	7.75628777186613	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTTCGCATTAGTTT	NA	False	NA	10	True	AATAAA	-21	NA	88868729	88909917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
ENSMUST00000006435.8	chr8	+	2825	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	0	0	0	0	multi-exon	TRUE	canonical	3	1214	junction_12	88.1479391228044	2231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	18	True	AATAAA	-22	NA	69541297	69566363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ENSMUST00000006444.9	chr14	-	8171	55	FSM	ENSMUSG00000006281.9	ENSMUST00000006444.9	8171	55	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_54	10.7386492216491	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATGCCCGATTGTGTTC	NA	False	NA	-4	True	TATAAA	-24	NA	51108017	51061515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51084289_51084467_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046_51093157_51098034_51098193_51098380_51098506_51099939_51100018_51100310_51100473_51100958_51101121_51103406_51103542_51104145_51104326_51105451_51106043_51107869
ENSMUST00000006451.8	chr14	-	1842	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_6	38.5313724991294	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATAGTTCTGTCTCTTT	NA	False	NA	-6	True	ATTAAA	-21	NA	51022976	51002871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ENSMUST00000006462.14	chr1	-	1817	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_8	50.6802722960325	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTGCATTTTGTG	NA	False	NA	1	True	AATAAA	-19	NA	74323897	74318998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ENSMUST00000006467.14	chr1	+	1404	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	0	0	0	0	multi-exon	FALSE	canonical	3	1867	junction_3	197.32307280632	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATTC	7848	False	NA	17	True	NA	NA	NA	74275675	74307146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUST00000006470.14	chr7	-	8469	37	FSM	ENSMUSG00000006307.17	ENSMUST00000006470.14	8469	37	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_36	36.953257094288	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGGTCTTTCCGTGCCT	NA	False	NA	-23	True	AATAAA	-18	NA	30288142	30268282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270264_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ENSMUST00000006476.6	chr7	-	1421	8	FSM	ENSMUSG00000006313.6	ENSMUST00000006476.6	1421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.252819269985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGCAGAGGAGCTTGTT	1907	False	NA	-8	True	AATAAA	-10	NA	30312272	30302516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299_30306408_30306555_30306631_30309038_30309240_30311811_30311900_30312138
ENSMUST00000006478.10	chr7	-	870	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_6	21.1850314032233	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTGTTATGTCCATCT	9257	False	NA	-16	True	AGTAAA	-14	NA	30428965	30427129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUST00000006496.15	chr7	+	751	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	0	0	0	0	multi-exon	FALSE	canonical	3	8457	junction_1	2746.02161089457	3194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGGTGTGCCTCTGTA	1264	False	NA	3	True	AATAAA	-18	NA	3706991	3709896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUST00000006508.10	chr10	+	2167	13	FSM	ENSMUSG00000006345.11	ENSMUST00000006508.10	2167	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	64.825995728737	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTCCATATCATGGACT	2268	False	NA	18	True	AATAAA	-41	NA	75409281	75422016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75409583_75410065_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUST00000006523.12	chr12	+	445	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_4	13.838352503098	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTGTGTTTTTGTCTG	NA	False	NA	13	True	AATAAA	-13	NA	113115631	113117497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
ENSMUST00000006544.9	chr15	+	2370	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	0	0	0	0	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAAGTGAGGCACCTGCC	632	False	NA	NA	False	ATTAAA	-25	NA	78915073	78922553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUST00000006544.9-0	chr15	+	1454	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	27	889	27	-889	multi-exon	FALSE	canonical	3	1189	junction_6	75.224663508719	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTCTGCTTTATTCTG	659	False	NA	16	True	NA	NA	NA	78915100	78921664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUST00000006557.13	chr4	+	1811	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTTGTTCAACGGATGC	NA	False	NA	NA	False	AATAAA	-20	NA	118285289	118290150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUST00000006557.13-0	chr4	+	1439	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	32	340	0	0	multi-exon	FALSE	canonical	3	108	junction_5	11.9505785019225	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGATTGTGTGTGTGTG	NA	False	NA	1	True	ATTAAA	-14	NA	118285321	118289810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUST00000006565.13	chr4	-	1793	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	0	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_4	200.755117703013	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294549	118290097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUST00000006579.5	chr1	+	704	4	FSM	ENSMUSG00000006412.11	ENSMUST00000006579.5	885	4	-60	241	0	191	multi-exon	FALSE	canonical	3	27	junction_3	957.822994550083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTAGCTATAGCCTG	NA	False	NA	20	True	NA	NA	NA	171173237	171185729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185355
ENSMUST00000006587.7	chr2	-	2329	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	14.6205335059977	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTATTATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	167503476	167484527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ENSMUST00000006611.9	chr4	+	1338	7	FSM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	0	0	0	0	multi-exon	FALSE	canonical	3	3072	junction_6	112.657297440808	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCATTTTTGTTCCTA	8716	False	NA	28	True	AATACA	-36	NA	148675959	148679076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ENSMUST00000006614.3	chr4	+	3913	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	17.9965274428152	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	NA	False	NA	8	True	AATAAA	-22	NA	141028550	141056695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ENSMUST00000006625.8	chr19	-	3165	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	19	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGGATGGTTCTGGCT	7765	False	NA	NA	False	AATAAA	-17	NA	4861662	4850596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4851834_4852578_4854044_4861199
ENSMUST00000006626.5	chr19	-	2887	21	FSM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_20	6.25519783859791	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTTGTTGTT	313	False	NA	4	True	AATAAA	-30	NA	4927937	4911243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266_4922387_4922569_4922685_4927738
ENSMUST00000006629.14	chr11	-	8461	36	FSM	ENSMUSG00000020315.19	ENSMUST00000006629.14	8461	36	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_35	139.777607619521	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATGACTAGCCGGTGTT	1519	False	NA	-7	True	ATTAAA	-15	NA	30218169	30049394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578_30169773_30217947
ENSMUST00000006632.8	chr19	+	1639	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	32	887	0	711	multi-exon	FALSE	canonical	3	97	junction_1	34	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATTATTGTAAAGAGAAT	NA	False	NA	9	True	AATAAA	-18	NA	4928731	4934538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4929058_4930148_4930427_4933503
ENSMUST00000006669.6	chr2	+	5185	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCATATTTCTGTAGCA	NA	False	NA	21	True	ATTAAA	-31	NA	71703567	71734202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ENSMUST00000006669.6-0	chr2	+	3217	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	96	1872	0	0	multi-exon	FALSE	canonical	3	206	junction_8	20.4606940253746	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71703663	71732330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ENSMUST00000006692.6	chr8	-	1756	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	22.2211110833319	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	False	NA	-8	True	AATAAA	-17	NA	123170161	123160339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
ENSMUST00000006701.8	chr14	+	3742	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATGGTGGTTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	30547546	30599167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ENSMUST00000006701.8-0	chr14	+	1652	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	4	2086	0	124	multi-exon	FALSE	canonical	3	200	junction_2	11.5387545750335	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGATTTGTTTGCCTT	NA	False	NA	8	True	TTTAAA	-20	NA	30547550	30597081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ENSMUST00000006742.11	chr8	-	6505	21	FSM	ENSMUSG00000006567.12	ENSMUST00000006742.11	6505	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	3.94810080924994	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCAGGTTTTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	22550321	22482800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545_22518753_22549987
ENSMUST00000006750.8	chr11	+	2046	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_7	30.0134969638661	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCATCTGTTGGAGA	7409	False	NA	14	True	AATAAA	-16	NA	102284228	102293381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ENSMUST00000006754.14	chr11	-	3213	20	FSM	ENSMUSG00000020923.18	ENSMUST00000006754.14	3213	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	260.634926855464	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCTA	9007	False	NA	60	True	NA	NA	NA	102209922	102196749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102197593_102197681_102197826_102197908_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ENSMUST00000006760.3	chr8	+	2189	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	0	0	0	0	multi-exon	FALSE	canonical	3	858	junction_2	66.8792905627208	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAACCTGTCACCGTA	2586	False	NA	27	True	AATAAA	-36	NA	123294753	123299867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ENSMUST00000006761.10	chr4	+	3524	11	FSM	ENSMUSG00000006586.16	ENSMUST00000006761.10	5783	11	-273	2532	-273	0	multi-exon	FALSE	canonical	0	0	junction_1	2.05182845286832	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	370	False	NA	NA	False	NA	NA	NA	13743162	13891117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_13743730_13835632_13835771_13837759_13838002_13841797_13841888_13846775_13846958_13859810_13860062_13865200_13865287_13865830_13866033_13875476_13875546_13881049_13881241_13889611
ENSMUST00000006762.7	chr8	-	1628	3	FSM	ENSMUSG00000006587.7	ENSMUST00000006762.7	1628	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCCTTGACGTCTCGAG	NA	False	NA	NA	False	AATAAA	-27	NA	123187472	123180946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123181774_123182861_123183468_123187277
ENSMUST00000006764.9	chr8	-	849	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	617.095414016342	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTCTCCTCAGTTT	NA	False	NA	-7	True	AATAAA	-15	NA	123303629	123301375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
ENSMUST00000006774.11	chr7	+	2736	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	47.1406925910002	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4706	False	NA	4	True	AATAAA	-15	NA	46445526	46473224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUST00000006814.9	chr5	+	1309	10	FSM	ENSMUSG00000006638.16	ENSMUST00000006814.9	1309	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	23.4020153189347	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGCTGAGGTTCCCTTT	NA	False	NA	17	True	ATTAAA	-19	NA	31107449	31112433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111499_31111499_31111610_31111748_31111798_31111877_31112044_31112159
ENSMUST00000006828.9	chr7	-	2343	17	FSM	ENSMUSG00000006651.9	ENSMUST00000006828.9	2343	17	0	0	0	0	multi-exon	TRUE	canonical	3	317	junction_16	59.4064390449386	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCGTGTTTCTGTTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	30144960	30134406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ENSMUST00000006838.16	chr9	+	2800	24	FSM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_2	39.8133167299073	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCTCTGTTGTCTGCCT	NA	False	NA	18	True	AATAAA	-21	NA	108384904	108393140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ENSMUST00000006851.15	chr9	+	3331	11	FSM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	235.086983901704	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1174	False	NA	64	True	NA	NA	NA	108394312	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108394440_108395901_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUST00000006853.11	chr9	-	1841	9	FSM	ENSMUSG00000006675.11	ENSMUST00000006853.11	1841	9	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	12.7273082385868	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGCTTGGGGGAGGGG	NA	False	NA	2	True	AATAAA	-36	NA	108474866	108456060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
ENSMUST00000006854.13	chr9	+	4791	27	FSM	ENSMUSG00000006676.17	ENSMUST00000006854.13	4791	27	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	78.1882873838765	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108367800	108378898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ENSMUST00000006856.3	chrX	-	5346	37	FSM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_20	43.7489682418023	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACTGTGTTTTGTTTTG	4277	False	NA	-2	True	AATAAA	-19	NA	92675761	92348372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ENSMUST00000006900.7	chr13	-	721	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	3	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGAAGTATTTTCTTT	4817	False	NA	-3	True	AATAAA	-19	NA	25015500	25001930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_25002175_25004697_25004883_25015208
ENSMUST00000006903.8	chr13	+	2214	5	FSM	ENSMUSG00000006720.17	ENSMUST00000006903.8	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	8.4372685153431	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTGCTAACTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	22129962	22144509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ENSMUST00000006911.12	chr10	+	1298	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	70	685	0	0	multi-exon	FALSE	canonical	3	4641	junction_3	430.829906300927	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATACTGGGATCTTT	NA	False	NA	23	True	ACTAAA	-30	NA	126899472	126903104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUST00000006912.12	chr2	-	3477	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTCTGTGCTGG	NA	False	NA	0	True	AATAAA	-21	NA	19002937	18847065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ENSMUST00000006912.12-0	chr2	-	2822	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	-119	774	-119	-774	multi-exon	FALSE	canonical	3	72	junction_7	14.3139403690559	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	19003056	18847839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ENSMUST00000006914.11	chr10	+	2395	11	FSM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	12.214745187682	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTTGTGTCTCTGTG	354	False	NA	8	True	GGGGCT	-23	NA	127001093	127008199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
ENSMUST00000006915.14	chr10	+	1791	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGAGTGTTTGCCTG	NA	False	NA	13	True	TTTAAA	-18	NA	126877800	126882234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ENSMUST00000006915.14-0	chr10	+	1351	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	26	414	0	52	multi-exon	FALSE	canonical	3	356	junction_3	29.1245600825146	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTGTGTGTGGCTCAGG	NA	False	NA	3	True	NA	NA	NA	126877826	126881820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ENSMUST00000006973.12	chr11	-	3043	18	FSM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_12	55.3609733498447	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6779	False	NA	-1	True	AATAAA	-18	NA	100603291	100595571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUST00000007005.14	chr17	-	2250	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCTGGGAGGTATGCA	NA	False	NA	NA	False	AATAAA	-19	NA	13179634	13161776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ENSMUST00000007005.14-0	chr17	-	2102	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	0	148	0	0	multi-exon	FALSE	canonical	3	922	junction_2	90.2592619901138	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTTGTCAGTGAGTT	NA	False	NA	0	True	NA	NA	NA	13179634	13161924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ENSMUST00000007007.14	chr17	-	2051	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	195.055094257798	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211146	13185685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ENSMUST00000007012.6	chr17	+	5861	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	0	0	0	0	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGTTTGAATACCTA	NA	False	NA	NA	False	NA	NA	NA	13226703	13239021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUST00000007012.6-0	chr17	+	3667	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	179	2015	0	-2015	multi-exon	FALSE	canonical	3	3082	junction_4	106.177622406984	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTATGCTGTCTGA	NA	False	NA	NA	False	AATAAA	-19	NA	13226882	13237006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUST00000007046.9	chr18	+	1823	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	9.25845604107201	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGCCTCAGTGTTGC	NA	False	NA	53	True	AATAAA	-20	NA	36868120	36875450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ENSMUST00000007130.15	chr9	+	3623	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_2	74.0160283248135	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762465	120789573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUST00000007131.16	chr11	-	4393	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	0	0	0	0	multi-exon	FALSE	canonical	3	2198	junction_15	363.337822300204	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	NA	False	NA	-17	True	AATAAA	-15	NA	100418826	100367181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ENSMUST00000007139.6	chr9	+	1035	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_2	26.9608770051883	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAATGCACTTTGTTT	NA	False	NA	34	True	AATAAA	-36	NA	120321556	120324396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
ENSMUST00000007171.13	chr16	+	3275	23	FSM	ENSMUSG00000006958.15	ENSMUST00000007171.13	3275	23	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	2.73332661424962	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGAGGTAGGCTCTT	3222	False	NA	NA	False	ATTAAA	-20	NA	20551876	20561134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ENSMUST00000007207.15	chr16	-	3128	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_10	37.9003269459341	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534867	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ENSMUST00000007212.9	chr16	+	2961	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	0	0	0	0	multi-exon	FALSE	canonical	3	2673	junction_8	225.447882003801	5179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470401	20482164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUST00000007236.5	chr17	-	1965	4	FSM	ENSMUSG00000007021.6	ENSMUST00000007236.5	1965	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5.18544972870135	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAGGTCCCCTGGACTTA	NA	False	NA	-1	True	AATAAA	-23	NA	24908929	24904065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24905415_24905492_24905636_24906476_24906715_24908694
ENSMUST00000007251.14	chr17	+	1945	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	22.1293102285439	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	32	True	AATAAA	-19	NA	35308266	35321963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ENSMUST00000007253.6	chr17	+	2474	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	7923	False	NA	NA	False	NA	NA	NA	35150228	35154897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUST00000007253.6-0	chr17	+	1760	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	114	600	53	-600	multi-exon	FALSE	canonical	3	102	junction_3	26.914680009244	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	8037	False	NA	13	True	NA	NA	NA	35150342	35154297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUST00000007255.13	chr17	+	1342	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	36.6488593122472	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGGGCTGTGACTGGTTT	NA	False	NA	13	True	AATAAA	-19	NA	35278010	35281067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUST00000007257.10	chr17	+	1466	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	0	0	0	0	multi-exon	TRUE	canonical	3	1084	junction_1	70.1524055182714	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGCTTAAAGTGTAGTGG	1676	False	NA	NA	False	AATAAA	-41	NA	35268941	35277725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ENSMUST00000007266.14	chr17	+	873	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	596.250995806296	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	243	False	NA	26	True	AATAAA	-20	NA	35201104	35204867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUST00000007296.12	chr5	+	7163	49	FSM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	0	0	0	0	multi-exon	FALSE	canonical	2	122	junction_13	49.0675377809901	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTCTGCCTCTCGTCTG	NA	False	NA	48	True	AGTAAA	-39	NA	110434171	110485340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ENSMUST00000007317.8	chr11	-	1576	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATACCTTGCTTATTTCAG	9599	False	NA	NA	False	AATAAA	-21	NA	100036946	100031635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
ENSMUST00000007317.8-0	chr11	-	1384	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	192	0	192	0	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATACCTTGCTTATTTCAG	9791	False	NA	NA	False	AATAAA	-21	NA	100036754	100031635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
ENSMUST00000007340.4	chr14	+	3950	23	FSM	ENSMUSG00000022229.4	ENSMUST00000007340.4	3950	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_18	2.50989776223246	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGTCATTGTGGCA	NA	False	NA	5	True	AGTAAA	-14	NA	56602524	56626007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56602747_56603405_56603556_56605839_56605900_56608232_56608434_56609195_56609310_56610035_56610171_56610299_56610418_56610644_56610914_56611883_56612083_56612216_56612327_56613594_56613730_56615739_56615933_56617404_56617581_56618219_56618357_56619953_56620105_56621523_56621693_56621782_56621938_56623249_56623374_56623568_56623715_56624304_56624439_56624606_56624709_56625096_56625189_56625349
ENSMUST00000007444.14	chr11	-	2099	13	FSM	ENSMUSG00000069631.15	ENSMUST00000007444.14	2099	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	54.9804889635102	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATTAAAATTTTCAGAGA	NA	False	NA	-34	True	NA	NA	NA	106084362	106054176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106071780_106071810_106075387_106075446_106077926_106078007_106084291
ENSMUST00000007482.8	chr19	-	1764	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGAAACTCCTGTAACAC	NA	False	NA	0	True	ATTAAA	-42	NA	6107815	6103651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ENSMUST00000007482.8-0	chr19	-	1462	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	27	275	0	0	multi-exon	FALSE	canonical	3	907	junction_2	10.0332779621949	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGGTGTTCAGAACCT	NA	False	NA	-15	True	ATTAAA	-15	NA	6107788	6103926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ENSMUST00000007533.15	chr11	+	615	6	FSM	ENSMUSG00000078656.12	ENSMUST00000007533.15	615	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	475.771541813926	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTGTGACTCTTTA	NA	False	NA	1	True	AGTAAA	-17	NA	101144532	101148875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101148726
ENSMUST00000007559.15	chr5	-	2545	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTATTTTGGATTTTTAA	NA	False	NA	52	True	ATTAAA	-17	NA	3697934	3689960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ENSMUST00000007559.15-0	chr5	-	1586	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	0	959	0	370	multi-exon	FALSE	canonical	3	302	junction_1	62.6592969957372	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTAGTGTCTATTTTTCT	NA	False	NA	32	True	TATAAA	-1	NA	3697934	3690919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ENSMUST00000007602.15	chr6	+	2515	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_5	55.6586820620906	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTTGTCGTTTGTGCT	2664	False	NA	6	True	ATTAAA	-15	NA	122285678	122294639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUST00000007708.14	chr17	+	2410	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	0	0	0	0	multi-exon	FALSE	canonical	3	1213	junction_1	77.3781135010385	1865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTAGTAATCGGAATGG	NA	False	NA	39	True	AATAAA	-24	NA	21165572	21186178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUST00000007733.8	chr14	-	2956	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAGAAGTTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	55919277	55915322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUST00000007733.8-0	chr14	-	1718	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	0	1238	0	1103	multi-exon	FALSE	canonical	3	280	junction_6	40.8281459290034	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919277	55916560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUST00000007738.11	chr8	+	3648	5	FSM	ENSMUSG00000007594.11	ENSMUST00000007738.11	3648	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.08972473588517	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGGCCAATTTTTATT	1089	False	NA	3	True	NA	NA	NA	70536106	70543512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70536214_70537069_70537191_70537431_70537795_70539457_70539782_70540779
ENSMUST00000007747.10	chr17	+	2025	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	0	0	0	0	multi-exon	TRUE	canonical	3	220	junction_6	33.8230690505755	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTATTTTGTTGGTT	9244	False	NA	16	True	AATAAA	-17	NA	57071777	57076841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ENSMUST00000007754.13	chr8	+	2063	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	625	112	0	-112	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTGGTACCTGGAATG	NA	False	NA	27	True	ATTAAA	-29	NA	71941371	71945932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ENSMUST00000007757.15	chr4	+	5756	9	FSM	ENSMUSG00000007613.16	ENSMUST00000007757.15	5756	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	37.2623721064561	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAACATTCTTTTCTGGA	0	True	NA	33	True	AATAAA	-24	NA	47353221	47414931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ENSMUST00000007790.11	chr11	-	3226	9	FSM	ENSMUSG00000007646.14	ENSMUST00000007790.11	1632	9	333	-1927	-98	-525	multi-exon	FALSE	canonical	0	0	junction_8	50.2120503465055	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTCTGTGTGTGTATAC	NA	False	NA	NA	False	NA	NA	NA	87295447	87267995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295420
ENSMUST00000007800.8	chr9	+	4046	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	0	0	0	0	multi-exon	FALSE	canonical	3	5814	junction_2	96	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74944999	74967595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_74945244_74959514_74959638_74963916
ENSMUST00000007803.12	chr2	-	2417	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	89.5	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCCTTGGCTCTGCGC	NA	False	NA	-5	True	AATAAA	-22	NA	152673648	152622587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152624203_152671346_152672023_152673522
ENSMUST00000007814.10	chr17	-	3978	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	0	0	0	0	multi-exon	TRUE	canonical	3	570	junction_17	70.4455420481926	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCCTGCTGGCTG	NA	False	NA	-9	True	AATAAA	-15	NA	57338488	57328050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ENSMUST00000007865.7	chr8	-	910	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	446	0	-106	0	multi-exon	FALSE	canonical	3	353	junction_4	97.9030132324843	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCATGTCTGTATGTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	71326133	71320870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
ENSMUST00000007921.9	chr11	-	813	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	5184	False	NA	-12	True	ATTAAA	-14	NA	51579480	51576212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51576920_51579374
ENSMUST00000007959.14	chr9	+	2197	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	0	0	0	0	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTATTCTCTTGTGT	NA	False	NA	15	True	AATAAA	-15	NA	108183327	108215133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ENSMUST00000007959.14-0	chr9	+	1505	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	167	525	-143	-525	multi-exon	FALSE	canonical	3	1457	junction_4	47.4535562418666	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTAGATGTAGTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	108183494	108214608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ENSMUST00000007980.7	chr13	-	2678	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATTGAGTGAGAGTATG	NA	False	NA	-5	True	AATAAA	-15	NA	58276370	58273692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58273700_58276400
ENSMUST00000007981.9	chr7	-	1295	7	FSM	ENSMUSG00000007837.12	ENSMUST00000007981.9	1295	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	9.01233722306385	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAATAAAAATGCAA	NA	False	NA	-53	True	AATAAA	-15	NA	44711076	44703036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011
ENSMUST00000007993.16	chr6	-	4465	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	0	True	NA	-4	True	NA	NA	NA	29165005	29123574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUST00000007993.16-0	chr6	-	2713	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	310	1442	310	124	multi-exon	FALSE	canonical	3	173	junction_12	24.6131175505167	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCTTTTTAACATTTTT	-15	True	NA	-19	True	AATATA	-29	NA	29164695	29125016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUST00000008004.10	chr8	-	2137	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	0	0	0	0	multi-exon	TRUE	canonical	3	250	junction_9	19.6148682268211	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGAATCCAATAGCTAC	9931	False	NA	-24	True	NA	NA	NA	70755139	70745515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUST00000008004.10-0	chr8	-	1515	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	37	585	0	135	multi-exon	FALSE	canonical	3	250	junction_9	19.6148682268211	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGACTTGAGAATGGGGT	9968	False	NA	-5	True	AGTAAA	-19	NA	70755102	70746100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUST00000008016.3	chr4	+	911	3	FSM	ENSMUSG00000007872.4	ENSMUST00000008016.3	1278	3	367	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGACATCTTGCGCCAC	772	False	NA	11	True	AATAAA	-19	NA	135871174	135872703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135871490_135871604_135871688_135872190
ENSMUST00000008024.7	chr4	-	6486	20	FSM	ENSMUSG00000007880.17	ENSMUST00000008024.7	6486	20	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_19	38.8360428873336	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAAAATACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133484080	133407251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483705
ENSMUST00000008036.9	chr9	-	499	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	11557	junction_2	345.5	1780	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGACTGGTCTCACTTG	NA	False	NA	-28	True	AATAAA	-14	NA	61821824	61820565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_61820804_61821169_61821245_61821638
ENSMUST00000008094.10	chr8	-	1978	5	FSM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	6.41774882649672	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCTCCAATTTGTGATT	NA	False	NA	-6	True	NA	NA	NA	71916299	71909348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889_71914617_71916109
ENSMUST00000008179.7	chrX	+	2019	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGGACAAGTGTG	1479	False	NA	NA	False	AATAAA	-15	NA	10583628	10585929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_10583944_10584225
ENSMUST00000008297.5	chr6	-	4014	18	FSM	ENSMUSG00000008153.13	ENSMUST00000008297.5	4014	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_17	12.5334155436701	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	8440	False	NA	NA	False	AATAAA	-15	NA	124441753	124407717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124441379
ENSMUST00000008445.7	chr18	+	1540	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	192	210	192	-210	multi-exon	FALSE	canonical	3	376	junction_1	34.4818792991333	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATTGTTCAGCTGTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	56706085	56720574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUST00000008462.11	chr7	-	2851	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACGAGCTTTTTTTCTGT	2158	False	NA	NA	False	NA	NA	NA	100512653	100495053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ENSMUST00000008462.11-0	chr7	-	2488	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	40	323	0	-323	multi-exon	FALSE	canonical	3	27	junction_8	6.09590026165127	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2198	False	NA	-3	True	AATAAA	-15	NA	100512613	100495376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ENSMUST00000008477.13	chr2	+	948	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	1113	0	-1113	multi-exon	FALSE	canonical	3	784	junction_1	113.59540777103	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTACTGGTTTATTG	1988	False	NA	13	True	AATAAA	-13	NA	142904958	142913660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUST00000008517.13	chr7	+	3144	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTTCAATACTTGGC	2933	False	NA	NA	False	AATAAA	-21	NA	3632983	3645485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUST00000008517.13-0	chr7	+	1880	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	7	1257	0	0	multi-exon	FALSE	canonical	3	674	junction_1	77.2880572079687	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	2940	False	NA	14	True	ATTAAA	-22	NA	3632990	3644228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUST00000008528.8	chr7	+	1233	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTTCTTTGCAT	6589	False	NA	12	True	ATTAAA	-22	NA	27186334	27189741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27186504_27188677
ENSMUST00000008537.10	chr16	-	2858	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	0	0	0	multi-exon	TRUE	canonical	3	300	junction_3	44.5146667465405	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACTGTAAAAGGTTGTG	NA	False	NA	-11	True	AATAAA	-21	NA	8490019	8476443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ENSMUST00000008542.12	chr10	-	4212	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTTGTTCCCTTCCATT	NA	False	NA	NA	False	AATAAA	-33	NA	93146997	93083275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ENSMUST00000008542.12-1	chr10	-	2303	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	0	1909	0	0	multi-exon	FALSE	canonical	3	43	junction_3	2.48746859276655	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCAAAGTGCACTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	93146997	93085184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ENSMUST00000008573.9	chr9	-	2781	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	20.4550278236258	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGCCTTATGGGATAT	NA	False	NA	NA	False	AATAAA	-14	NA	25063116	25019427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ENSMUST00000008579.14	chr7	-	3034	7	FSM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.10100173924104	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCATTGTCCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	4448648	4428665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
ENSMUST00000008594.9	chr8	+	948	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	453.90775494587	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACAGTTTAAATTGTTT	NA	False	NA	-8	True	AATAAA	-15	NA	106587211	106605962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUST00000008633.15	chr4	-	3730	7	FSM	ENSMUSG00000008489.19	ENSMUST00000008633.15	3730	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	42.0571700849636	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTATCTTTAAATACAT	NA	False	NA	2	True	AATAAA	-20	NA	91260291	91138999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_91141808_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ENSMUST00000008733.15	chr5	+	2918	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_9	548.115559591832	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGTGTGTATGTGC	4294	False	NA	33	True	AATAAA	-44	NA	29940685	29991476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ENSMUST00000008748.8	chr3	+	3330	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	0	0	0	0	multi-exon	FALSE	canonical	3	1295	junction_8	115.436605979213	3117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6105	False	NA	NA	False	AATAAA	-26	NA	88461064	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ENSMUST00000008812.9	chr17	-	560	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	20050	junction_4	1387.25833481007	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174651	34170972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
ENSMUST00000008826.14	chrX	+	799	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	0	0	0	0	multi-exon	FALSE	canonical	3	2920	junction_1	2439.95592514838	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314417	73316741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000008830.10	chr17	-	3544	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	10.077477638554	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	33474119	33458691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
ENSMUST00000008878.10	chr7	-	4518	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGATGCGTGGTAGCTT	NA	False	NA	-3	True	AATAAA	-15	NA	118594434	118571269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
ENSMUST00000008878.10-0	chr7	-	2914	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	0	1604	0	-642	multi-exon	FALSE	canonical	3	70	junction_1	4.64279609239471	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGTCTCTGCTGTGTC	NA	False	NA	-5	True	AATAAA	-17	NA	118594434	118572873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
ENSMUST00000008893.9	chr19	+	1888	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	114.751906302248	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3575	False	NA	18	True	AATAAA	-19	NA	4198617	4204034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ENSMUST00000008907.14	chr3	-	4696	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	44	3229	0	-3229	multi-exon	FALSE	canonical	3	127	junction_4	6.86122357082823	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTCATGTTTGATT	NA	False	NA	-1	True	ATTAAA	-17	NA	100592775	100472752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ENSMUST00000008966.13	chr12	-	648	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_2	28.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTTCCCCCCCTCCCT	4291	False	NA	0	True	AATAAA	-24	NA	85327209	85319171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85319602_85326764_85326857_85327083
ENSMUST00000008995.15	chr1	-	3937	26	FSM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	23.2525611492584	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-10	NA	92076115	91860478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977
ENSMUST00000009003.9	chr13	-	2688	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTTCATTGATGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	18118824	18055155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ENSMUST00000009003.9-0	chr13	-	947	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	0	1741	0	-1741	multi-exon	FALSE	canonical	3	817	junction_1	45.9292934846597	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAGGCTCAATTGACTG	NA	False	NA	-20	True	AATAAA	-21	NA	18118824	18056896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ENSMUST00000009036.11	chr8	-	1354	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	0	0	0	0	multi-exon	FALSE	canonical	3	2053	junction_8	117.712573669936	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	False	NA	-11	True	AATAAA	-22	NA	23083774	23067101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ENSMUST00000009039.6	chr15	-	570	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	4307	junction_1	558.07426825548	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	361	False	NA	-25	True	AATAAA	-22	NA	34443368	34440655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
ENSMUST00000009058.10	chr5	+	4306	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	57.377196351684	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848185	8916315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ENSMUST00000009099.13	chr12	+	2826	21	FSM	ENSMUSG00000021144.15	ENSMUST00000009099.13	2826	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	195.740874627657	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9323	False	NA	24	True	ATTAAA	-41	NA	113061897	113100826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086860_113090399_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUST00000009102.9	chr3	+	1456	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	358.969413738831	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAATAA	2560	False	NA	NA	False	NA	NA	NA	95018332	95030362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ENSMUST00000009120.8	chr16	+	4987	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	99.7045016753055	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84632011	84660667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUST00000009138.13	chr17	-	3351	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_3	53.1740471465247	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226969	29189853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ENSMUST00000009143.8	chr2	-	2238	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	-242	1674	-242	-1674	multi-exon	TRUE	canonical	3	82	junction_3	13.8734358477712	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTAGGACGTTACAGATA	NA	False	NA	-38	True	AATAAA	-16	NA	172782356	172711478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ENSMUST00000009157.4	chr5	-	653	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	65	1312	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	210.5	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115436893_115438571_115438710_115438890
ENSMUST00000009174.15	chr2	-	2858	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	14.3527000944073	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGTATATTAGATATTT	NA	False	NA	-7	True	AATAAA	-20	NA	37249344	37240085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ENSMUST00000009219.3	chr11	-	2628	5	FSM	ENSMUSG00000009075.3	ENSMUST00000009219.3	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	5.21416340365355	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGCCCTGGTTCTGTCT	7564	False	NA	3	True	NA	NA	NA	4696778	4686891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4688949_4689123_4689278_4689553_4689667_4690368_4690513_4696618
ENSMUST00000009220.5	chr11	+	792	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	205.698225563567	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654677	4687669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUST00000009234.16	chr11	+	4085	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_7	27.5174490096738	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTCTGGCTATGGTCCC	NA	False	NA	NA	False	NA	NA	NA	4936823	4992791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUST00000009236.6	chr10	+	1321	7	FSM	ENSMUSG00000009092.6	ENSMUST00000009236.6	1321	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	4.01732359773132	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTCAATATGTTAGT	NA	False	NA	NA	False	NA	NA	NA	75729246	75731775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75729352_75729452_75729519_75729603_75729678_75729800_75729895_75730265_75730462_75730872_75730964_75731080
ENSMUST00000009256.4	chr6	+	6925	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGACTCATCTTTTTGT	NA	False	NA	17	True	AATAAA	-18	NA	120813198	120869803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ENSMUST00000009256.4-0	chr6	+	3109	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	-26	3842	0	-3842	multi-exon	FALSE	canonical	3	188	junction_2	15.192286054296	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCACCAAGACCTGATGT	NA	False	NA	7	True	AATAAA	-18	NA	120813172	120865961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ENSMUST00000009321.11	chr16	-	4320	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_13	25.6660390814434	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107110	18071811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ENSMUST00000009344.16	chr7	-	4455	24	FSM	ENSMUSG00000000131.16	ENSMUST00000009344.16	4455	24	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_14	102.701045398272	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGATGGGGCATCTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	125799580	125700887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ENSMUST00000009392.6	chr7	-	1605	3	FSM	ENSMUSG00000009248.7	ENSMUST00000009392.6	1605	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTGCAGTGCCTTGTA	NA	False	NA	-9	True	TATAAA	-15	NA	142523001	142520565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_142521077_142521636_142522437_142522707
ENSMUST00000009411.9	chr6	+	2801	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	25.1445819213603	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACAGGGTGTTTTCTG	NA	False	NA	24	True	AATAAA	-31	NA	47897409	47909573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
ENSMUST00000009420.15	chr6	+	3145	3	FSM	ENSMUSG00000052751.17	ENSMUST00000009420.15	3145	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570816	48576015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48570987_48571724_48571911_48573226
ENSMUST00000009435.12	chr10	+	2294	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_4	46.3188946327522	957	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTTCTTTGTTTTGT	1291	False	NA	32	True	AATAAA	-15	NA	77417553	77434566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
ENSMUST00000009530.5	chrX	+	833	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	211.264384125673	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCTGTATAGTGTTT	NA	False	NA	18	True	AATAAA	-19	NA	20736459	20740974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUST00000009550.14	chrX	-	3548	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGAGGGAAATG	NA	False	NA	NA	False	NA	NA	NA	20816847	20799633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ENSMUST00000009550.14-0	chrX	-	2782	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	0	766	0	-766	multi-exon	FALSE	canonical	3	96	junction_1	13.1666244725062	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGCTGTTGGTATTTTT	NA	False	NA	-6	True	AATATA	-19	NA	20816847	20800399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ENSMUST00000009679.11	chr18	+	5008	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGATTCATTTCTAG	NA	False	NA	NA	False	NA	NA	NA	68433425	68457923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUST00000009679.11-0	chr18	+	2025	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	37	2946	0	0	multi-exon	FALSE	canonical	3	765	junction_7	139.06832852954	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCAATTCTGAGACTC	NA	False	NA	87	True	AATAAA	-17	NA	68433462	68454977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUST00000009693.15	chr2	-	798	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	118310192	118306330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ENSMUST00000009693.15-0	chr2	-	735	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	63	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_1	23.7421039505769	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGGTTTGTTTTTCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	118310129	118306330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ENSMUST00000009699.16	chr2	-	1733	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_2	88.3259430870807	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	32602796	32597449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ENSMUST00000009705.14	chr2	+	3422	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	26.1475405640955	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGCTTCAATTAGTTC	555	False	NA	NA	False	AATAAA	-13	NA	32536606	32572670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ENSMUST00000009707.14	chr2	+	1536	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	20.9105236663265	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	589	False	NA	9	True	AATAAA	-20	NA	32647245	32652256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUST00000009713.14	chr16	+	8256	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	25	-2466	0	0	multi-exon	FALSE	canonical	2	20	junction_16	15.0082008831838	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGTGTACAGAGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	13074369	13235393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ENSMUST00000009727.12	chr15	+	4180	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009727.12	4180	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	626.014554321401	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGTGTCACTGTGTT	NA	False	NA	20	True	AATAAA	-20	NA	79975544	80003702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_80000055
ENSMUST00000009728.13	chr15	+	819	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_2	72.7232195840274	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCCTGTGTGGATTA	NA	False	NA	18	True	NA	NA	NA	79975534	79997642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
ENSMUST00000009740.9	chrX	-	1933	13	FSM	ENSMUSG00000009596.10	ENSMUST00000009740.9	1933	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.16999866773227	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGTCTCTAATTTCT	NA	False	NA	NA	False	NA	NA	NA	133377239	133360866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133361415_133365048_133365109_133366370_133366484_133366656_133366891_133367272_133367375_133367824_133367898_133368646_133368689_133370864_133370921_133371128_133371259_133372140_133372275_133372779_133372859_133373654_133373717_133376939
ENSMUST00000009772.8	chr8	+	8405	4	FSM	ENSMUSG00000009628.15	ENSMUST00000009772.8	8405	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	1.63299316185545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTTTGCCTACATGTT	5931	False	NA	7	True	AATAAA	-41	NA	34060571	34075610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_34067607_34068978_34069029_34071539_34072775_34075525
ENSMUST00000009772.8-0	chr8	+	5491	4	FSM	ENSMUSG00000009628.15	ENSMUST00000009772.8	8405	4	2914	0	2914	0	multi-exon	FALSE	canonical	3	20	junction_3	1.63299316185545	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTTTGCCTACATGTT	8845	False	NA	7	True	AATAAA	-41	NA	34063485	34075610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_34067607_34068978_34069029_34071539_34072775_34075525
ENSMUST00000009774.11	chr8	+	1469	7	FSM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_3	33.4398298772919	992	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTTGACTGGTTAAG	8865	False	NA	NA	False	NA	NA	NA	34089652	34109469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
ENSMUST00000009777.4	chr1	-	871	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCATTATTTAATTCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	192955525	192954468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_192955111_192955296
ENSMUST00000009777.4-0	chr1	-	761	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	110	0	110	0	multi-exon	FALSE	canonical	3	79	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCATTATTTAATTCTTG	NA	False	NA	-1	True	AATAAA	-16	NA	192955415	192954468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_192955111_192955296
ENSMUST00000009814.10	chrX	-	3250	30	FSM	ENSMUSG00000009670.12	ENSMUST00000009814.10	3250	30	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_17	8.2193472636908	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCATTGATCAGCTGATT	NA	False	NA	-5	True	AATAAA	-16	NA	100103245	99882253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920215_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ENSMUST00000009875.5	chrX	+	5287	6	FSM	ENSMUSG00000009731.5	ENSMUST00000009875.5	5287	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGTTTATTTATTTAT	NA	False	NA	NA	False	AATAGA	-23	NA	7688527	7704519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7691203_7697410_7697574_7697670_7697755_7697840_7697940_7698331_7698583_7702504
ENSMUST00000009885.14	chr9	+	3742	16	FSM	ENSMUSG00000009741.16	ENSMUST00000009885.14	3742	16	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_1	93.8633522142103	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1302	False	NA	20	True	AATAAA	-20	NA	113760001	113806267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ENSMUST00000010007.9	chr4	+	1142	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	0	0	0	0	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	140688513	140706504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ENSMUST00000010007.9-0	chr4	+	944	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	198	0	0	0	multi-exon	FALSE	canonical	3	2820	junction_2	205.868890316143	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	140688711	140706504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ENSMUST00000010038.10	chr11	-	1896	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	15.4110350074224	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGGGTCTATAACAGCCA	NA	False	NA	3	True	NA	NA	NA	59340825	59297959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ENSMUST00000010049.6	chr1	-	5518	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAATTGCAAGCCAAAC	8261	False	NA	15	True	TATAAA	-33	NA	106687457	106648188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ENSMUST00000010049.6-0	chr1	-	2012	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	44	3462	0	-3462	multi-exon	FALSE	canonical	3	165	junction_2	12.4017123469222	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAATGAAAAGC	8305	False	NA	NA	False	NA	NA	NA	106687413	106651650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ENSMUST00000010085.4	chrX	-	2393	22	FSM	ENSMUSG00000009941.11	ENSMUST00000010085.4	2393	22	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_3	6.66632652193486	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGTCTTGAAGTGCT	NA	False	NA	-2	True	AATAAA	-18	NA	133865503	133845276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133845538_133845640_133845702_133850435_133850634_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
ENSMUST00000010127.12	chrX	+	2473	13	FSM	ENSMUSG00000031397.12	ENSMUST00000010127.12	2473	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	3.8151743807532	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTATGCAGTTTGTGCC	6476	False	NA	6	True	AATAAA	-18	NA	73220864	73252106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73221030_73225389_73225505_73234827_73234926_73237124_73237317_73237399_73237528_73240589_73240784_73241245_73241411_73244203_73244361_73246136_73246268_73248479_73248564_73249479_73249577_73249950_73250071_73251279
ENSMUST00000010189.3	chr9	+	2194	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTGTGCAGCCCTCTC	NA	False	NA	33	True	AATAAA	-38	NA	107411143	107415872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107412529_107415063
ENSMUST00000010191.13	chr9	+	1893	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	7.31816613336672	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTTGTCTTTTTCTGC	NA	False	NA	15	True	ATTAAA	-17	NA	107446315	107449975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
ENSMUST00000010192.11	chr9	+	2056	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	0	0	0	0	multi-exon	TRUE	canonical	3	631	junction_11	35.5716016363504	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464840	107470237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUST00000010195.14	chr9	+	3014	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	10.4029910228848	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGCCTGTGGTCCCCAA	NA	False	NA	31	True	NA	NA	NA	107454156	107458177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
ENSMUST00000010198.5	chr9	+	1665	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	4.5	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGAGTGGCGTCCAGTG	NA	False	NA	20	True	AATAAA	-21	NA	107440453	107443311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107440732_107441774_107441896_107442045
ENSMUST00000010201.9	chr9	+	1441	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	11.6721891691319	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTACTGCTTCAGCC	NA	False	NA	13	True	AATAAA	-24	NA	107419424	107422905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
ENSMUST00000010211.7	chr9	+	1727	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	9.63068014212911	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTGGACTCTATAGA	NA	False	NA	9	True	AATAAA	-16	NA	107431781	107439462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUST00000010239.6	chr19	-	1819	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	0	0	0	0	multi-exon	FALSE	canonical	3	2610	junction_8	198.183902915953	2715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTGGGTGTTTTTGTCT	NA	False	NA	-18	True	TTTAAA	-26	NA	8691243	8684980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ENSMUST00000010241.14	chr19	+	2326	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	71.7857924661976	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTTGTTTCCCTCA	8569	False	NA	47	True	GATAAA	-26	NA	8734436	8748286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUST00000010248.4	chr19	+	748	2	FSM	ENSMUSG00000117924.2	ENSMUST00000010248.4	748	2	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_1	0	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTCTGTCCTCTCTCTC	6519	False	NA	NA	False	AATAAA	-38	NA	8748359	8749839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8748680_8749411
ENSMUST00000010249.7	chr19	-	818	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	40.2833712591188	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATATATTACTTTTC	5074	False	NA	-31	True	NA	NA	NA	8751831	8749915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
ENSMUST00000010267.10	chr11	-	2639	17	FSM	ENSMUSG00000010122.15	ENSMUST00000010267.10	2639	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_16	9.25675429078681	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGCTGTAGATTATTA	NA	False	NA	-1	True	ATTAAA	-18	NA	61268907	61234226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254219_61254318_61258498_61258544_61260076_61260120_61260943_61261093_61262581_61262651_61264180_61264283_61268738
ENSMUST00000010278.12	chr3	+	3682	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	0	0	0	0	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAATTGCTTTTGTTGTT	NA	False	NA	12	True	AATAAA	-31	NA	105866684	105877076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUST00000010278.12-0	chr3	+	1988	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	134	1560	-5	673	multi-exon	FALSE	canonical	3	910	junction_4	50.9162953856864	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTACTTATTACC	NA	False	NA	23	True	AATAAA	-27	NA	105866818	105875516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUST00000010298.7	chr8	+	2330	15	FSM	ENSMUSG00000010154.8	ENSMUST00000010298.7	2330	15	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	8.26752930544105	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACATTGTCTCTTTCCC	NA	False	NA	18	True	NA	NA	NA	124059451	124096254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
ENSMUST00000010348.7	chr9	-	812	5	FSM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	56.6171352154098	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984840	20978815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984684
ENSMUST00000010421.7	chr11	+	7443	39	FSM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	88.3718730713483	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152577	78181449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ENSMUST00000010434.8	chr1	+	3458	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	24.6080384337223	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCAGGCCTGTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	43137869	43155107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
ENSMUST00000010451.8	chr7	+	1831	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCCTGACTTGTCTG	NA	False	NA	NA	False	AATAAA	-24	NA	46700348	46704525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_46700550_46702597_46702863_46703160
ENSMUST00000010502.13	chr11	+	1362	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCATTCTCCAGCAAC	981	False	NA	NA	False	NA	NA	NA	101339232	101349524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
ENSMUST00000010502.13-0	chr11	+	1091	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	37	234	0	0	multi-exon	FALSE	canonical	3	40	junction_3	8.33499983336666	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGTGATGGTCTTCTT	1018	False	NA	5	True	NA	NA	NA	101339269	101349290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
ENSMUST00000010506.10	chr11	+	1124	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	120.614284210269	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGGTTTGGGTCCC	NA	False	NA	29	True	AATAAA	-28	NA	101518767	101526926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ENSMUST00000010520.10	chr14	-	824	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTCTTTCTTCTTGA	NA	False	NA	-11	True	AATAAA	-15	NA	55909581	55899719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
ENSMUST00000010520.10-0	chr14	-	575	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	247	2	0	0	multi-exon	FALSE	canonical	3	1795	junction_3	42.0502345085283	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGACTCTTTCTTCTT	NA	False	NA	-13	True	AATAAA	-13	NA	55909334	55899721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
ENSMUST00000010536.9	chr11	-	4289	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	27.7778576387741	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTCTTTGGTTATCTG	NA	False	NA	NA	False	AATAAA	-16	NA	76654405	76617427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ENSMUST00000010550.12	chr14	+	418	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	0	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_1	196.876230154887	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTGGCTTTCTTTTC	NA	False	NA	27	True	AATAAA	-28	NA	54664365	54667213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUST00000010597.10	chr1	-	4663	21	FSM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_19	30.7481300244421	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408262	36374810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ENSMUST00000010682.4	chr3	-	481	4	FSM	ENSMUSG00000010538.15	ENSMUST00000010682.4	481	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	85.0215658916411	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGACATGGGTCTGAG	NA	False	NA	NA	False	CATAAA	-11	NA	88204145	88190066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88190292_88194404_88194525_88202697_88202758_88204069
ENSMUST00000010736.9	chr17	-	2976	11	FSM	ENSMUSG00000010592.10	ENSMUST00000010736.9	2976	11	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_4	74.6324996231534	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCACTGACTTACTGTCC	NA	False	NA	-5	True	AATAAA	-16	NA	50600664	50586424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUST00000010795.5	chr9	-	1689	12	FSM	ENSMUSG00000010651.5	ENSMUST00000010795.5	1689	12	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	59.9400526973023	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGGTCCAGCTCTTGCT	NA	False	NA	NA	False	AGTAAA	-35	NA	118986161	118977090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_118977482_118977801_118977948_118978029_118978086_118978338_118978519_118978667_118978859_118979891_118979973_118980883_118980983_118982737_118982781_118982993_118983074_118984812_118984871_118985658_118985753_118985891
ENSMUST00000010804.4	chr9	-	2657	15	FSM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	9.15540433686184	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTAGTCTCTTTACAA	2838	False	NA	NA	False	TATAAA	-25	NA	118922570	118900594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
ENSMUST00000010807.6	chr19	+	3460	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	0	0	0	0	multi-exon	TRUE	canonical	3	652	junction_7	60.0436480355873	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160251	10174238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUST00000010899.14	chr7	-	3222	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_21	336.211639490553	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTGTCTAGCCTTCGC	NA	False	NA	NA	False	NA	NA	NA	143153827	143110966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ENSMUST00000010899.14-0	chr7	-	2745	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	0	477	0	0	multi-exon	FALSE	canonical	3	290	junction_21	336.211639490553	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153827	143111443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ENSMUST00000010904.5	chr7	-	757	2	FSM	ENSMUSG00000010760.6	ENSMUST00000010904.5	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTCTGTGTAGTTC	NA	False	NA	2	True	AATAAA	-27	NA	143056278	143055281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143055554_143055793
ENSMUST00000010940.11	chr6	-	1736	13	FSM	ENSMUSG00000010796.12	ENSMUST00000010940.11	1736	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.42307313450798	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGTGCTCATTTGTC	-6	True	NA	NA	False	AATAAA	-24	NA	18109056	18050962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_18051403_18054526_18054641_18055433_18055540_18071963_18072074_18073760_18073818_18074824_18074901_18075759_18075885_18076503_18076639_18077151_18077264_18103498_18103611_18104774_18104898_18108401_18108502_18108930
ENSMUST00000010974.9	chr15	+	1411	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	14.7986485869487	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCAAGTATTTATTTATA	NA	False	NA	11	True	AATAAA	-16	NA	79400611	79411940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
ENSMUST00000011055.7	chr2	+	919	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_6	40.9691618442729	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAATTTTCTTGATGT	4593	False	NA	25	True	AATAAA	-21	NA	102904019	102922989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ENSMUST00000011058.9	chr2	-	2506	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGATATGACATGCAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	102903858	102851419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ENSMUST00000011058.9-0	chr2	-	1737	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	51	718	0	-718	multi-exon	FALSE	canonical	3	314	junction_1	20.370567002418	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATGTTTGGTTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	102903807	102852137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ENSMUST00000011178.5	chr5	+	4104	15	FSM	ENSMUSG00000011034.7	ENSMUST00000011178.5	4104	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.0572763655761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTTTGAAATTGCAGG	NA	False	NA	NA	False	AATAAA	-15	NA	33261562	33320214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33261936_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
ENSMUST00000011178.5-0	chr5	+	2585	15	FSM	ENSMUSG00000011034.7	ENSMUST00000011178.5	4104	15	0	1519	0	-1519	multi-exon	TRUE	canonical	0	0	junction_1	3.0572763655761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGGTTCCTGTCATTTT	NA	False	NA	NA	False	TTTAAA	-6	NA	33261562	33318695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33261936_33274126_33274199_33289293_33289399_33290729_33290790_33291946_33292052_33301306_33301413_33302593_33302675_33303850_33304072_33304286_33304423_33306240_33306349_33309902_33310054_33311889_33312059_33315431_33315648_33316420_33316530_33318122
ENSMUST00000011302.9	chr12	-	2615	18	FSM	ENSMUSG00000011158.9	ENSMUST00000011302.9	2615	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	37.0119217677383	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	False	NA	-3	True	NA	NA	NA	112964324	112923704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946677_112951536_112951713_112956683_112956765_112963792
ENSMUST00000011302.9-0	chr12	-	2343	18	FSM	ENSMUSG00000011158.9	ENSMUST00000011302.9	2615	18	272	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	37.0119217677383	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	False	NA	-3	True	NA	NA	NA	112964052	112923704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946677_112951536_112951713_112956683_112956765_112963792
ENSMUST00000011398.13	chr11	-	1231	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	0	1019	0	-1019	multi-exon	FALSE	canonical	3	110	junction_3	12.8	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGAGTCATTTTTAGC	6301	False	NA	0	True	TATAAA	-19	NA	45846321	45838688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ENSMUST00000011400.8	chr11	+	6383	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	0	0	0	0	multi-exon	TRUE	canonical	3	430	junction_20	39.4256282802095	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946818	46038170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ENSMUST00000011450.8	chr8	+	2681	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	56.2515483021626	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTCCTCTGGTCTTC	2157	False	NA	NA	False	GATAAA	-14	NA	70495462	70524997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUST00000011492.15	chr3	+	3930	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCCTTTTTACCAAGGA	NA	False	NA	5	True	NA	NA	NA	36120127	36147002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ENSMUST00000011492.15-0	chr3	+	2430	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	93	1407	0	74	multi-exon	FALSE	canonical	3	170	junction_2	13.4755962948483	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACTTCAAATTGTAG	NA	False	NA	-3	True	AATAAA	-16	NA	36120220	36145595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ENSMUST00000011733.9	chr17	+	1748	13	FSM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	6.07533721057706	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCTGCACTGGTTCTT	3933	False	NA	6	True	AATAAA	-16	NA	56293510	56303881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
ENSMUST00000011877.13	chr11	-	8238	35	FSM	ENSMUSG00000020315.19	ENSMUST00000011877.13	8238	35	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_34	120.675137266652	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	NA	False	NA	-8	True	ATTAAA	-14	NA	30169772	30049395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578
ENSMUST00000011896.8	chr19	+	1775	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	0	0	0	0	multi-exon	FALSE	canonical	3	5418	junction_2	350.959003620398	5684	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTACTGTTTGTCTTGTGT	4060	False	NA	0	True	AATAAA	-17	NA	41900361	41907099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
ENSMUST00000011981.5	chr8	+	1536	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	11.3880419739304	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGATTCCCCCTTTGAC	NA	False	NA	16	True	AATAAA	-16	NA	4303079	4306220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
ENSMUST00000012028.14	chr5	-	1762	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	0	0	0	0	multi-exon	TRUE	canonical	3	1353	junction_4	27.6541136180497	1394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCTGTGGCGCTTGAT	NA	False	NA	3	True	AATAAA	-29	NA	114829045	114807458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
ENSMUST00000012104.7	chr15	-	2175	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	11.1439445440113	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98465517	98441091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ENSMUST00000012152.13	chr16	-	4045	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	135.772503989233	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709557	17658218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ENSMUST00000012259.9	chr16	-	3410	18	FSM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_13	36.2216360814255	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540811	17469074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUST00000012262.12	chr4	-	3133	9	FSM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	23.2025725944344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACAAGGTTTGTGTGGT	NA	False	NA	NA	False	AAAAAG	-21	NA	133728198	133696367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
ENSMUST00000012279.6	chr16	-	1172	3	FSM	ENSMUSG00000022738.8	ENSMUST00000012279.6	1172	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGATTTCAAGTCCC	NA	False	NA	NA	False	AATAAA	-25	NA	17732923	17730970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17731583_17732229_17732484_17732617
ENSMUST00000012314.10	chr13	-	5169	4	FSM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	22	4264	22	0	multi-exon	FALSE	canonical	3	9	junction_2	10.6144555520604	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCCCAATAAATGCTTT	NA	False	NA	-28	True	NA	NA	NA	67785888	67765145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67769969_67771586_67771683_67772153_67772281_67785765
ENSMUST00000012348.9	chr3	-	1064	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_6	40.3692143766479	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCAGTGTATTATTTT	2042	False	NA	-4	True	AATAAA	-13	NA	107893769	107889017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
ENSMUST00000012440.14	chr17	-	2426	10	FSM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	101.660412679532	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTCTTTCTCCTTCCC	5822	False	NA	-27	True	AATAAA	-21	NA	46593936	46568796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
ENSMUST00000012540.5	chr6	+	2211	4	FSM	ENSMUSG00000012396.13	ENSMUST00000012540.5	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	4116	junction_3	205.443152450718	5852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684526	122691592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122684893_122688496_122688763_122689587_122689675_122690100
ENSMUST00000012580.13	chr3	-	4016	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	9.33324032691755	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGCATGTGTCCTTCAT	NA	False	NA	NA	False	NA	NA	NA	20089479	20050108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ENSMUST00000012587.4	chr19	+	4819	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	0	0	0	0	multi-exon	TRUE	canonical	3	280	junction_17	34.0452546631592	622	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGCTGCCTGTACAT	NA	False	NA	8	True	ATTAAA	-15	NA	37364850	37410307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ENSMUST00000012612.11	chr11	+	4199	20	FSM	ENSMUSG00000041164.16	ENSMUST00000012612.11	4199	20	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	53.7737643143183	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4913	False	NA	15	True	AATAAA	-18	NA	6339363	6356158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUST00000012627.5	chr6	-	670	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	3	1410	junction_2	59.4474557908074	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	NA	False	NA	-11	True	AATAAA	-14	NA	8259173	8255935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
ENSMUST00000012679.15	chr6	-	4251	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_17	54.5301683125804	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	NA	False	NA	-2	True	TTTAAA	-5	NA	29609886	29540825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUST00000012734.10	chr5	+	1024	7	FSM	ENSMUSG00000029131.15	ENSMUST00000012734.10	1024	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	922.805580222015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGTATTTGGTCAGA	4601	False	NA	13	True	AATAAA	-21	NA	29940992	29962967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29961231_29961337_29962545
ENSMUST00000012873.16	chr13	-	4835	4	FSM	ENSMUSG00000058093.14	ENSMUST00000012873.16	4835	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	17.2497987105808	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGGTGTCTCTTC	NA	False	NA	-4	True	NA	NA	NA	67757826	67737557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757691
ENSMUST00000013130.15	chr12	-	3046	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	90.4848149144585	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAAAGAAAGA	NA	False	NA	NA	False	TTTAAA	-27	NA	51738670	51656414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ENSMUST00000013220.8	chr9	-	8957	13	FSM	ENSMUSG00000013076.18	ENSMUST00000013220.8	8957	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_12	3.15788255358274	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTCCTCTTTTACCTTC	NA	False	NA	1	True	AATAAA	-17	NA	14526302	14453261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14526029
ENSMUST00000013262.15	chr11	-	4064	10	FSM	ENSMUSG00000020472.15	ENSMUST00000013262.15	4064	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	26.5236907846458	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397470	59376345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
ENSMUST00000013294.16	chr8	-	2059	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	34	2259	0	1304	multi-exon	FALSE	canonical	3	21	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATCATGGTGTGTGGTC	NA	False	NA	NA	False	AGTAAA	-17	NA	106485262	106442744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106444283_106454619_106454964_106485085
ENSMUST00000013299.11	chr8	-	1275	7	FSM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	11.5854314646552	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTGTGTTCCATAGGAG	NA	False	NA	-15	True	ATTAAA	-14	NA	106434565	106430283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455
ENSMUST00000013304.8	chr8	-	1629	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	38.5115938016444	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGTCTGTCTGCTCC	NA	False	NA	-10	True	AATAAA	-18	NA	106292679	106251096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
ENSMUST00000013338.14	chr9	-	3924	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_5	114.47891605978	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGAGTCTTTTTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	108526579	108480140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ENSMUST00000013559.3	chr11	-	8378	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGAGTGTGTCTGTGCTTC	NA	False	NA	-5	True	AATAAA	-19	NA	95896766	95847988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ENSMUST00000013559.3-0	chr11	-	2409	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	0	5969	0	304	multi-exon	FALSE	canonical	3	452	junction_5	71.7782867514933	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGGTTTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	95896766	95853957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ENSMUST00000013633.12	chr5	+	2329	7	FSM	ENSMUSG00000008090.15	ENSMUST00000013633.12	2329	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	17.0171482138851	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTCGTATATTTAATTT	NA	False	NA	-24	True	NA	NA	NA	108842367	108854762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108842399_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ENSMUST00000013693.11	chr5	-	3895	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGACTCATGGGTATT	NA	False	NA	-4	True	NA	NA	NA	72325532	72313917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ENSMUST00000013693.11-0	chr5	-	1459	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	0	2436	0	0	multi-exon	FALSE	canonical	3	313	junction_3	25.4889682019496	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTTGCTTGATTTC	NA	False	NA	-4	True	AATACA	-14	NA	72325532	72316353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ENSMUST00000013737.13	chr1	-	1623	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_12	107.460457843804	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	False	NA	-1	True	ATTAAA	-28	NA	171074691	171062421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUST00000013759.6	chr2	+	4691	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	NA	False	NA	18	True	AATAAA	-22	NA	90575713	90611365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ENSMUST00000013766.13	chr5	+	966	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_6	22.1108319357027	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTACCTGTGCGTG	908	False	NA	12	True	AATAAA	-25	NA	31205978	31211967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ENSMUST00000013771.15	chr5	+	1434	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_1	4.29389100932942	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCGGCTCCTTTTGCTGT	NA	False	NA	6	True	AATAAA	-19	NA	31274055	31294972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
ENSMUST00000013773.12	chr5	+	7137	44	FSM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	0	0	0	0	multi-exon	TRUE	canonical	3	481	junction_6	136.90610173497	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7053	False	NA	18	True	AATAAA	-14	NA	31212123	31235823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ENSMUST00000013807.8	chr19	+	8292	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGCTTCTTAGCTTTT	7593	False	NA	4	True	ATTAAA	-19	NA	32734896	32803560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ENSMUST00000013807.8-0	chr19	+	5358	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	98	2836	0	-2836	multi-exon	FALSE	canonical	3	125	junction_6	9.39331544237709	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGTGTTTTATTAA	7691	False	NA	NA	False	ATTAAA	-16	NA	32734994	32800724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ENSMUST00000013842.12	chr1	-	2501	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTGATTCTAGAATCT	NA	False	NA	-4	True	AATAAA	-20	NA	172034371	172024294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ENSMUST00000013842.12-0	chr1	-	1669	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	107	725	0	-725	multi-exon	FALSE	canonical	3	108	junction_1	8.37987005998436	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCTTTTTTGTGGTTTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	172034264	172025019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ENSMUST00000013845.13	chr14	-	1173	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	0	0	0	0	multi-exon	FALSE	canonical	3	3717	junction_4	299.373048590253	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	False	NA	NA	False	AATAAA	-40	NA	31923855	31902118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUST00000013882.10	chr6	-	2072	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	56.1066840937869	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	-33	True	AATAAA	-17	NA	106777026	106757161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
ENSMUST00000013886.9	chr7	-	2983	22	FSM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_16	25.6093980765123	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9941	False	NA	-3	True	AATAAA	-17	NA	4504679	4484518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ENSMUST00000013910.5	chr17	+	1142	3	FSM	ENSMUSG00000013766.12	ENSMUST00000013910.5	1142	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	34.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGAGAGCTGTCTGTG	NA	False	NA	20	True	NA	NA	NA	35295912	35297780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35296183_35296812_35296939_35297034
ENSMUST00000013931.12	chr17	+	4026	27	FSM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_9	70.6987525311972	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	7172	False	NA	19	True	AATAAA	-20	NA	35117946	35133027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUST00000013949.15	chr9	-	2667	9	FSM	ENSMUSG00000032000.18	ENSMUST00000013949.15	2667	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	6.89202437604511	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCTGGGCAGGTTTAT	6	True	NA	NA	False	AATAAA	-34	NA	7873025	7848699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_7849458_7849672_7849715_7850920_7851173_7854367_7854608_7857390_7857440_7858701_7858781_7860263_7860364_7860463_7861409_7872823
ENSMUST00000013966.8	chr9	-	888	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_2	52.5	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGCCGCTGTACTTCTT	7944	False	NA	-8	True	AATAAA	-15	NA	22028468	22024286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22024976_22025103_22025240_22028405
ENSMUST00000013970.9	chr10	-	3307	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	43.7148447820759	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047424	127032935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ENSMUST00000014022.15	chr8	+	3929	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	13.0243100800474	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAATGTGTTATGTTT	NA	False	NA	7	True	AATAAA	-17	NA	26609395	26633899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ENSMUST00000014058.11	chr7	+	1373	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_4	14.5134420452214	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAATGTGTGTGCCTCT	355	False	NA	9	True	ATTAAA	-16	NA	43430458	43434834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
ENSMUST00000014218.15	chr16	+	3932	6	FSM	ENSMUSG00000014074.18	ENSMUST00000014218.15	3932	6	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_5	6.9108610172684	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGCTTTTTCCACAT	NA	False	NA	13	True	AATAAA	-14	NA	32096278	32119724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
ENSMUST00000014220.15	chr16	+	838	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238519	32247917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
ENSMUST00000014220.15-0	chr16	+	593	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	44	201	0	-197	multi-exon	FALSE	canonical	3	248	junction_3	20.9568008054665	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTAAGTTGTATATGTT	NA	False	NA	17	True	AATAAA	-28	NA	32238563	32247716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
ENSMUST00000014221.13	chr2	+	2609	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	25.1197133741609	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGAGTTTTACCCGG	NA	False	NA	NA	False	AATAAA	-25	NA	119378177	119417508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ENSMUST00000014321.5	chr11	+	1784	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	45.7666181111663	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9241	False	NA	10	True	TATAAA	-18	NA	62770280	62786011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUST00000014339.15	chr11	-	1821	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	509	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	249.671049855795	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5891	False	NA	-21	True	AATAAA	-15	NA	100510485	100473643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUST00000014370.11	chr1	-	2098	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	0	0	0	0	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAGGA	7296	False	NA	NA	False	TATAAA	-11	NA	160040445	160029936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUST00000014370.11-0	chr1	-	1474	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	70	554	0	-554	multi-exon	FALSE	canonical	3	4235	junction_5	193.777810907235	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCTGCAATCTGTT	7366	False	NA	-5	True	AATAAA	-20	NA	160040375	160030490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUST00000014389.6	chr11	+	2174	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_1	58.9736287580211	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTTTACATAAAGCAGTAT	NA	False	NA	NA	False	GATAAA	-4	NA	62349285	62405243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
ENSMUST00000014438.5	chr18	-	572	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATGTCGTACGTCAT	NA	False	NA	NA	False	NA	NA	NA	36877610	36875384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36875712_36877233_36877341_36877472
ENSMUST00000014438.5-0	chr18	-	443	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	0	129	0	-129	multi-exon	FALSE	canonical	3	2929	junction_2	68.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCAGAATGTCCTCTT	NA	False	NA	-21	True	TATAAA	-18	NA	36877610	36875513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36875712_36877233_36877341_36877472
ENSMUST00000014445.7	chr16	-	544	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	52	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_4	70.3491293478462	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCCTGTTTGAGAAGGT	NA	False	NA	-15	True	AATAAA	-28	NA	4442800	4434327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
ENSMUST00000014447.13	chr16	+	3619	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	16.3978318349985	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTGGGACACCTGCT	NA	False	NA	36	True	AATAAA	-30	NA	4412576	4433821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ENSMUST00000014457.15	chr15	-	503	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	8539	junction_3	472.446822404384	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTTGGTTATTAAT	NA	False	NA	-1	True	AATAAA	-22	NA	35938392	35932121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
ENSMUST00000014473.6	chr10	-	3231	22	FSM	ENSMUSG00000014329.15	ENSMUST00000014473.6	3231	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.79370335301786	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70995520	70760931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_70761209_70763544_70763625_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ENSMUST00000014499.10	chr2	-	8942	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGACTTTAGCAATGTCA	NA	False	NA	-22	True	NA	NA	NA	128529311	128452023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ENSMUST00000014499.10-0	chr2	-	6342	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	0	2600	0	-2600	multi-exon	FALSE	canonical	3	297	junction_42	39.2671319365267	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529311	128454623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ENSMUST00000014505.5	chr2	+	4302	19	FSM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	3.05302925867424	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGCAGAACTCAAAATGT	NA	False	NA	NA	False	AATAAA	-20	NA	128540875	128644814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ENSMUST00000014545.11	chr7	+	1370	8	FSM	ENSMUSG00000030851.16	ENSMUST00000014545.11	1370	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.73619909446343	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTCTGCCTTTTATAA	NA	False	NA	NA	False	NA	NA	NA	46510626	46527566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_46510726_46511186_46511320_46515832_46515951_46519022_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
ENSMUST00000014546.15	chr7	-	1949	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTACTCTTTGCAAACG	NA	False	NA	NA	False	AATAAA	-30	NA	46569717	46538696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUST00000014546.15-0	chr7	-	1524	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	0	425	0	212	multi-exon	FALSE	canonical	3	992	junction_2	86.0289931030289	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569717	46539121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUST00000014562.14	chr7	-	4953	23	FSM	ENSMUSG00000014418.17	ENSMUST00000014562.14	4953	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_22	12.9471270625399	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATATGAGATTTACTT	NA	False	NA	2	True	AATAAA	-26	NA	46445451	46409889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ENSMUST00000014614.4	chr8	-	1783	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_3	7.81280999384984	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCGAGCCTTGGTCCTGGG	9981	False	NA	-5	True	AATAAA	-17	NA	123202803	123192885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
ENSMUST00000014640.9	chr14	-	6712	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	5280	False	NA	NA	False	AATAAA	-19	NA	31552608	31420724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ENSMUST00000014640.9-0	chr14	-	5465	28	FSM	ENSMUSG00000014496.9	ENSMUST00000014640.9	6712	28	0	1247	0	-1247	multi-exon	FALSE	canonical	3	136	junction_10	15.4869740389594	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTATTTGTATCTGTGC	5280	False	NA	NA	False	AATAAA	-28	NA	31552608	31421971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31552283
ENSMUST00000014684.6	chr17	-	1046	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	0	0	0	0	multi-exon	FALSE	canonical	3	4626	junction_6	706.208473585007	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877866	31866054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUST00000014691.10	chr14	+	6646	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	5.80111132128866	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTTGTATCCTTGTCA	NA	False	NA	22	True	AATAAA	-22	NA	63075126	63198958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ENSMUST00000014694.11	chr6	-	5334	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGTGCTTAAAACGT	NA	False	NA	1	True	ATTAAA	-24	NA	92191906	92163692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ENSMUST00000014694.11-0	chr6	-	4523	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	76	735	0	-735	multi-exon	FALSE	canonical	3	92	junction_10	18.3307536376882	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTAGTGACTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	92191830	92164427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ENSMUST00000014698.10	chr6	-	1107	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	13.5369863706809	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483951	83457198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUST00000014750.15	chr11	-	1711	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_5	58.5020495018625	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	False	NA	0	True	ATTAAA	-28	NA	70537884	70535021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ENSMUST00000014812.13	chr5	+	3146	18	FSM	ENSMUSG00000014668.16	ENSMUST00000014812.13	3146	18	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_11	67.7699140155478	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283725	110319838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUST00000014892.8	chr6	-	2984	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	47.9474712576169	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTAGTGTGTGACC	9712	False	NA	-4	True	NA	NA	NA	83752795	83745866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ENSMUST00000014911.12	chr17	+	1891	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_2	77.8728932299295	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720149	15737689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ENSMUST00000014913.11	chr17	-	1758	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	0	0	0	0	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGCTGCACTAGTTG	NA	False	NA	NA	False	NA	NA	NA	15718560	15695282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUST00000014913.11-0	chr17	-	820	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	0	938	0	0	multi-exon	FALSE	canonical	3	4315	junction_4	304.330741135364	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718560	15696220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUST00000014917.8	chr17	-	3581	11	FSM	ENSMUSG00000014773.14	ENSMUST00000014917.8	3581	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	1.34536240470737	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGTGTGACTTTTTAG	NA	False	NA	NA	False	AATAAA	-16	NA	15596238	15587615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_15588298_15588395_15588514_15588628_15589428_15590468_15590686_15590792_15590963_15591084_15591216_15591867_15591929_15593698_15593957_15594151_15594213_15594927_15595222_15595448
ENSMUST00000014920.8	chr8	+	968	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	320	1888	320	-1888	multi-exon	FALSE	canonical	2	9	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTGCTCAAGAACTGA	NA	False	NA	23	True	AATAAA	-41	NA	106003091	106006683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
ENSMUST00000014927.8	chr8	+	4167	21	FSM	ENSMUSG00000014782.17	ENSMUST00000014927.8	4167	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.04320417490881	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGCATATGCATTCTGGG	NA	False	NA	NA	False	AATAAA	-24	NA	106102012	106109494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106102488_106102647_106102744_106102821_106102946_106103051_106103146_106103225_106103301_106103380_106103498_106103668_106103768_106103856_106104006_106104170_106104310_106104398_106104516_106104931_106105115_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
ENSMUST00000015000.12	chr8	+	785	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	56.0556865982391	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCGTGTGGGTGATGATG	251	False	NA	18	True	AATAAA	-20	NA	106052985	106055689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
ENSMUST00000015003.10	chr8	+	1993	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	369.398142461925	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024294	106032002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ENSMUST00000015011.10	chr2	-	3281	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	0	0	0	0	multi-exon	TRUE	canonical	3	778	junction_1	38.262252939418	890	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGTGGTCCTATATGG	NA	False	NA	-2	True	AATAAA	-18	NA	26823940	26810051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ENSMUST00000015017.8	chr2	+	1203	6	FSM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	0	0	0	0	multi-exon	TRUE	canonical	3	245	junction_5	33.4388995034227	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	False	NA	37	True	CATAAA	-32	NA	26806378	26810195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
ENSMUST00000015049.5	chr12	-	2461	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACGTGCTTGGAATGAT	NA	False	NA	NA	False	AATAAA	-16	NA	44257109	44252341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_44254189_44254869_44255097_44256722
ENSMUST00000015049.5-0	chr12	-	1863	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	258	340	0	-340	multi-exon	FALSE	canonical	3	92	junction_1	7	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATCTTCAGTGTTGTCAT	NA	False	NA	NA	False	TATAAA	-11	NA	44256851	44252681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_44254189_44254869_44255097_44256722
ENSMUST00000015100.15	chr5	+	5962	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGGTCCTAATAATATAA	2695	False	NA	NA	False	AATAAA	-32	NA	32616186	32652867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUST00000015100.15-1	chr5	+	2975	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	220	2767	-89	0	multi-exon	FALSE	canonical	3	1274	junction_2	51.5470856675363	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAGTGATTATTCTGT	2915	False	NA	23	True	AGTAAA	-20	NA	32616406	32650100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUST00000015107.13	chr11	+	3212	21	FSM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	74.0480249567806	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCCTGGATTCTCTGA	NA	False	NA	25	True	AATAAA	-18	NA	105072742	105173002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ENSMUST00000015124.15	chr1	-	1133	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	96.4219243740758	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCGTAATCATCCATCA	NA	False	NA	-5	True	AATAAA	-29	NA	152262433	152246485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
ENSMUST00000015137.10	chr5	-	3331	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	3.46794848097065	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTGTGTGTGTCTGAG	5766	False	NA	0	True	AATAAA	-33	NA	134717452	134684892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
ENSMUST00000015146.16	chr15	+	5215	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCATTTTTATTATAG	NA	False	NA	17	True	AATAAA	-24	NA	65658888	65745665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ENSMUST00000015146.16-0	chr15	+	3989	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	0	1226	0	-1226	multi-exon	FALSE	canonical	3	451	junction_16	48.5493912261498	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	65658888	65744439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ENSMUST00000015157.10	chr8	+	588	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	0	1071	0	-1071	multi-exon	FALSE	canonical	3	528	junction_1	75.9884859699152	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACGTTGTCCTGTGTC	5522	False	NA	24	True	ACTAAA	-16	NA	123338384	123342328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
ENSMUST00000015160.6	chr8	+	2206	10	FSM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	8.97458689169274	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGACCTGTGAGCTGTG	9534	False	NA	13	True	AATAAA	-25	NA	123502243	123544619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
ENSMUST00000015171.11	chr8	-	2557	14	FSM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	4.2966892442366	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATCCTGGTCTTTTGTT	NA	False	NA	-4	True	NA	NA	NA	123338202	123304980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ENSMUST00000015197.9	chr6	+	3571	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCGCCTGTTGAGT	NA	False	NA	12	True	AATAAA	-13	NA	88175315	88184012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ENSMUST00000015197.9-0	chr6	+	2697	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	335	539	335	-539	multi-exon	FALSE	canonical	3	138	junction_4	9.31665175908169	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGCTTCACAGTCCTT	NA	False	NA	10	True	AATAAA	-18	NA	88175650	88183473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ENSMUST00000015236.4	chr2	+	722	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	2396	junction_4	232.166965781095	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTCCTGGATTTTTCCT	NA	False	NA	17	True	NA	NA	NA	25447858	25452094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
ENSMUST00000015239.10	chr2	+	2388	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	35.5176012703561	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390761	25395483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ENSMUST00000015256.15	chr6	-	3067	18	FSM	ENSMUSG00000015112.16	ENSMUST00000015256.15	3067	18	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCTTGCTCTTGTGT	20	False	6217138	-3	True	AATAAA	-16	NA	6217118	6041217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ENSMUST00000015278.15	chr7	-	3443	13	FSM	ENSMUSG00000015134.16	ENSMUST00000015278.15	3443	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.11214326382511	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGTTTTTCATTGGAG	NA	False	NA	0	True	AATAAA	-19	NA	66077265	66040637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_66042510_66048435_66048511_66049825_66049984_66051718_66051884_66055721_66055907_66057548_66057652_66058913_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66077061
ENSMUST00000015333.12	chr6	+	3961	18	FSM	ENSMUSG00000015189.13	ENSMUST00000015333.12	3961	18	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	9.97574914150592	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTGGTTTTTGTTT	87	False	NA	30	True	AATAAA	-41	NA	4600838	4643355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ENSMUST00000015346.12	chr10	-	3447	13	FSM	ENSMUSG00000015202.14	ENSMUST00000015346.12	3447	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	5.32812245438193	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGGATTTTATGAATT	NA	False	NA	-4	True	AATAAA	-11	NA	7162237	7069062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643_7110808_7161631
ENSMUST00000015358.8	chrX	+	4634	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_13	10.0440356959354	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGTCTCTGTGTTT	NA	False	NA	11	True	ACTAAA	-24	NA	70408365	70462802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ENSMUST00000015361.11	chrX	+	1544	5	FSM	ENSMUSG00000015217.12	ENSMUST00000015361.11	1544	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	352.483687565822	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599546	70604282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70599615_70601662_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000015391.10	chr4	+	1552	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_3	32.5785205311721	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	NA	False	NA	10	True	AATAAA	-21	NA	53011879	53022060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUST00000015427.13	chrX	-	1427	10	FSM	ENSMUSG00000031399.16	ENSMUST00000015427.13	1427	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	42.3425186885344	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTTCTTGCAGTGGAAT	NA	False	NA	-48	True	AATAAA	-1	NA	73436609	73428366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280_73436334_73436494
ENSMUST00000015433.4	chrX	-	761	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_2	31	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGCCTCTAAATTTTC	4493	False	NA	-18	True	AATAAA	-30	NA	73397224	73395766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73396105_73396479_73396609_73396930
ENSMUST00000015435.11	chrX	+	2666	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_5	84.5884152824723	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	5948	False	NA	15	True	AATAAA	-16	NA	73348603	73355468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUST00000015456.10	chr10	+	1284	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	10.2089285540757	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCTCGTTGTATTTTA	248	False	NA	5	True	AATAAA	-14	NA	80765906	80768038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ENSMUST00000015467.9	chr3	+	2364	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	8.60232526704263	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGGTATCTGATTCT	NA	False	NA	-1	True	AATAAA	-16	NA	90155478	90160919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
ENSMUST00000015481.6	chr2	+	1063	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	35	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTCCTGTCCTGCTGCTT	NA	False	NA	34	True	NA	NA	NA	30061504	30064081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30062079_30062853_30062964_30063702
ENSMUST00000015486.7	chrX	+	5076	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	9.5	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCATTTTATTTCTTGT	NA	False	NA	9	True	AATAAA	-19	NA	9138994	9179489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_9139474_9148235_9148499_9175155
ENSMUST00000015498.9	chr9	+	1753	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	139	2546	139	867	multi-exon	FALSE	canonical	3	281	junction_3	14.5982661641717	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCAGCCAGATAACCTT	8514	False	NA	NA	False	AATAAA	-17	NA	95519792	95577603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUST00000015501.11	chr9	+	2885	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_12	30.6779414999533	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAATTTGTTTTTTTTGT	6151	False	NA	NA	False	AATAAA	-31	NA	65201541	65237939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUST00000015605.15	chr17	+	2566	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_9	22.8588265568706	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9741	False	NA	11	True	AATAAA	-24	NA	34866119	34874048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ENSMUST00000015612.14	chr17	+	6591	30	FSM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_11	11.3350235386032	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTGAGGGACTAAAGGG	NA	False	NA	14	True	AATAAA	-23	NA	34783241	34807477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ENSMUST00000015622.8	chr17	-	1238	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_5	40.2124358874217	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCCAGTCTCTCCC	795	False	NA	-23	True	NA	NA	NA	34822664	34820064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ENSMUST00000015680.11	chr13	+	1152	7	FSM	ENSMUSG00000015536.15	ENSMUST00000015680.11	1152	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	16.9844700306551	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGATCCTGTCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	114954812	114965259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUST00000015712.15	chr8	+	1975	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	239	1901	73	-1901	multi-exon	TRUE	canonical	3	87	junction_5	14.4871164560059	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAGGAACGTGTGACT	NA	False	NA	NA	False	NA	NA	NA	69333381	69357685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
ENSMUST00000015719.16	chr17	+	823	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_3	173.829418300432	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895343	26918621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
ENSMUST00000015725.16	chr17	+	1098	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	9.09945053286186	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGGTAAATGCTTAAC	1994	False	NA	15	True	AATAAA	-15	NA	27000039	27011495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
ENSMUST00000015749.7	chr17	-	2616	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	5.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTTTTTTTAATGGC	NA	False	NA	-5	True	TATAAA	-18	NA	46867101	46859254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
ENSMUST00000015791.6	chr2	-	11388	79	FSM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	0	0	0	0	multi-exon	TRUE	canonical	2	61	junction_68	85.5106215839985	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGTGTGTTGATTTATA	NA	False	NA	-4	True	ATTAAA	-14	NA	179867652	179818165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ENSMUST00000015796.9	chr5	-	1230	5	FSM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	6.38357266740185	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTATCACAACTGTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	5799326	5786316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5786674_5789795_5789961_5790349_5790863_5792825_5792941_5799246
ENSMUST00000015797.11	chr5	-	3423	6	FSM	ENSMUSG00000015653.14	ENSMUST00000015797.11	3657	6	0	234	0	0	multi-exon	FALSE	canonical	3	20	junction_3	7.4565407529229	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTCCCACCATTGTCT	5284	False	NA	NA	False	AATAAA	-24	NA	5744067	5721724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
ENSMUST00000015800.16	chr9	+	2394	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	0	0	0	0	multi-exon	FALSE	canonical	3	3928	junction_3	6050.21958150074	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2167	False	NA	10	True	AATAAA	-20	NA	40712279	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUST00000015812.12	chrX	-	1626	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTACTGCTTGAATATAA	NA	False	NA	-7	True	AATAAA	-14	NA	99670174	99666491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ENSMUST00000015812.12-0	chrX	-	999	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	630	-3	0	0	multi-exon	FALSE	canonical	3	301	junction_6	98.6728601659713	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	-4	True	AATAAA	-17	NA	99669544	99666488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ENSMUST00000015816.5	chr13	-	658	3	FSM	ENSMUSG00000015672.5	ENSMUST00000015816.5	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	532	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTTGTTACTTTTAAA	NA	False	NA	-83	True	TTTAAA	-9	NA	14787600	14784957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14785326_14786007_14786190_14787492
ENSMUST00000015829.15	chr7	+	3346	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	0	2735	0	0	multi-exon	FALSE	canonical	3	100	junction_4	19.6022957839127	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCTCCCTTTTTATG	NA	False	NA	21	True	AATAAA	-25	NA	131012329	131047938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUST00000015841.12	chr3	-	4658	22	FSM	ENSMUSG00000015697.15	ENSMUST00000015841.12	4658	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_21	51.1160255943511	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1644	False	NA	-4	True	ATTAAA	-15	NA	95264511	95230835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264337
ENSMUST00000015855.8	chr3	-	3140	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	23.7538396466589	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTGTTTCTTTTTAAAA	4350	False	NA	NA	False	ATTAAA	-19	NA	95189387	95160984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ENSMUST00000015858.12	chr3	+	2216	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	31.9782738746168	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4318	False	NA	45	True	AATAAA	-31	NA	95222394	95230910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUST00000015877.14	chr6	+	2537	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	0	0	0	0	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAAGTTGTGTGAATT	1217	False	NA	NA	False	AGTAAA	-19	NA	17636981	17666971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUST00000015877.14-0	chr6	+	1873	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	59	605	0	-605	multi-exon	FALSE	canonical	3	1705	junction_7	87.4846018197234	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATTTTAAAATACTTTC	3	True	NA	17	True	AGTAAA	-24	NA	17637040	17666366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUST00000015891.6	chr3	-	2001	15	FSM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	636	0	0	0	multi-exon	TRUE	canonical	3	42	junction_11	13.9571136130707	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTCAGTGTTTGATGG	NA	False	NA	-5	True	AATAAA	-26	NA	95965142	95907143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUST00000015892.14	chr3	-	2435	16	FSM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	0	498	0	0	multi-exon	FALSE	canonical	3	400	junction_5	22.8428447343048	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763197	95737933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
ENSMUST00000015893.13	chr3	+	1381	7	FSM	ENSMUSG00000015749.13	ENSMUST00000015893.13	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	557.690301352123	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGGTGTAGTTTGGTGC	NA	False	NA	12	True	ATTAAA	-15	NA	95836589	95852877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845316_95851618_95851674_95852491
ENSMUST00000015894.12	chr3	+	2863	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTCA	NA	False	NA	NA	False	AATACA	-4	NA	95801280	95805600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ENSMUST00000015894.12-0	chr3	+	2020	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	0	843	0	0	multi-exon	FALSE	canonical	3	313	junction_4	15.0651916682132	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGGACTTTATAAT	NA	False	NA	-20	True	NA	NA	NA	95801280	95804757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ENSMUST00000015901.11	chr10	+	3471	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_12	33.3716446503115	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCATGTGTTCTCTCT	1122	False	NA	14	True	NA	NA	NA	7668654	7698899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUST00000015903.12	chr14	-	1538	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_4	16.1322658049017	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACATTGTCTATTTTC	NA	False	NA	NA	False	AATAAA	-31	NA	47025868	47013023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUST00000015920.12	chr2	-	973	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	17.7951304200522	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCTGACTGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	26800581	26795599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
ENSMUST00000015934.13	chr2	-	1173	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_4	27.1834048639974	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	-5	True	AATAAA	-19	NA	26806542	26803394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ENSMUST00000015941.8	chr13	-	1927	8	FSM	ENSMUSG00000042118.8	ENSMUST00000015941.8	2467	8	0	540	0	-540	multi-exon	FALSE	canonical	3	8	junction_1	2.60298102261266	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGAGTAGCTTGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	93810810	93792767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93803081_93803274_93805762_93805855_93807920_93808054_93810745
ENSMUST00000015950.12	chr5	-	1380	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_4	94.8542741964395	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607578	45591394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUST00000015981.12	chr11	-	1887	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	0	786	0	0	multi-exon	TRUE	canonical	3	390	junction_1	128.516496201532	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGATCCGTACGAGT	NA	False	NA	-14	True	AATAAA	-22	NA	50101618	50090978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUST00000015994.4	chr3	-	3856	18	FSM	ENSMUSG00000015850.12	ENSMUST00000015994.4	3856	18	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_17	6.21918006589627	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGCTCTTCGTTATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	95595169	95583513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592864_95595131
ENSMUST00000016026.14	chr5	-	4884	7	FSM	ENSMUSG00000015882.19	ENSMUST00000016026.14	4884	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	18.7349939951952	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACACTGTCGGTGTGTGGT	NA	False	NA	NA	False	AGTAAA	-30	NA	46014855	45887732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ENSMUST00000016033.9	chr10	+	2029	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	42.1416262935671	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGTGTCATTTTTG	NA	False	NA	21	True	AATACA	-20	NA	93289272	93320736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ENSMUST00000016081.13	chr13	-	2046	9	FSM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_5	233.718279933342	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCGTGTTTTGTGTTAC	5905	False	NA	-5	True	AGTAAA	-18	NA	56283444	56221431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ENSMUST00000016086.10	chr5	+	3482	16	FSM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	3.05505046330389	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTTTGTGTGTGTG	NA	False	NA	10	True	AATAAA	-17	NA	134212865	134246988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
ENSMUST00000016087.4	chr3	-	729	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACGGTGCTCTTAATAC	NA	False	NA	NA	False	AATAAA	-21	NA	96104902	96103903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96104596_96104865
ENSMUST00000016087.4-0	chr3	-	517	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	0	212	0	63	multi-exon	FALSE	canonical	3	441	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTATTCCTTGATTTG	NA	False	NA	-7	True	AATAAA	-15	NA	96104902	96104115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96104596_96104865
ENSMUST00000016088.9	chr5	+	4806	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	0	2561	0	-2548	multi-exon	FALSE	canonical	3	5	junction_3	2.20439901106855	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	134128549	134170621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
ENSMUST00000016105.9	chr1	-	2771	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_9	76.3848079718008	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCTAAAAGACCAATGGC	NA	False	NA	NA	False	AATAAA	-16	NA	177624077	177590527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUST00000016115.6	chr14	+	2119	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	26.6816364232448	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACTGATTTGAGATAAT	NA	False	NA	21	True	ATTAAA	-25	NA	29700293	29715176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ENSMUST00000016138.11	chr8	-	1930	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATTGGTCCTGTTTTTCT	NA	False	NA	NA	False	ATTAAA	-5	NA	26505678	26488749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ENSMUST00000016138.11-0	chr8	-	1627	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	53	250	53	148	multi-exon	FALSE	canonical	3	814	junction_5	99.1573875210516	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATTCCATAGTGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	26505625	26488999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ENSMUST00000016143.9	chr5	+	5196	10	FSM	ENSMUSG00000029636.12	ENSMUST00000016143.9	5196	10	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_1	19.5037191768236	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146321794	146410425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146397774_146397951_146403607_146403875_146405024_146405390_146407029
ENSMUST00000016144.12	chr13	+	1598	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	66.7730484551964	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTGTAGTCAGTTGCAA	9637	False	NA	14	True	AATAAA	-29	NA	112937325	113004428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUST00000016172.10	chr15	-	11305	35	FSM	ENSMUSG00000016028.12	ENSMUST00000016172.10	11305	35	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	10.8831478247056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	-5	True	AATAAA	-21	NA	85918404	85783129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85784907_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
ENSMUST00000016309.16	chr1	-	2378	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	38.8406364690682	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGAGTTGCTGTGGCTT	NA	False	NA	-6	True	AATAAA	-22	NA	74343564	74327405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
ENSMUST00000016383.10	chrX	+	2911	11	FSM	ENSMUSG00000016239.12	ENSMUST00000016383.10	2911	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.36478105580879	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCATACTTCTTTCTG	NA	False	NA	NA	False	TATAAA	-15	NA	35592005	35625994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ENSMUST00000016396.8	chr2	-	421	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1326.5	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTGTTTCTGTTCTA	NA	False	NA	-4	True	AATAAA	-22	NA	174305898	174302864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174303015_174304292_174304423_174305757
ENSMUST00000016400.9	chr2	-	1441	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_4	13.5292276202302	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTACTTTATTTACA	5329	False	NA	0	True	AGTAAA	-17	NA	174280832	174269285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ENSMUST00000016401.15	chr2	-	1553	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	0	0	0	0	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCAGCTCTTCCCAT	NA	False	NA	-4	True	AATAAA	-45	NA	174314874	174306859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUST00000016401.15-0	chr2	-	1406	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	147	0	0	0	multi-exon	FALSE	canonical	3	812	junction_2	54.463198583998	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCAGCTCTTCCCAT	NA	False	NA	-4	True	AATAAA	-45	NA	174314727	174306859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUST00000016452.11	chrX	+	1732	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTCACACTTTTATTA	NA	False	NA	7	True	AATAAA	-16	NA	36137947	36147875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUST00000016452.11-0	chrX	+	702	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	63	967	0	0	multi-exon	FALSE	canonical	3	837	junction_1	46.7435557055729	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTCTTCCCTTGGC	NA	False	NA	28	True	ATTAAA	-20	NA	36138010	36146908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUST00000016463.4	chrX	+	1240	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	11014	junction_3	650.055895032625	6458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTCGTTGTTTGTTT	NA	False	NA	29	True	AATAAA	-31	NA	36059303	36062460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
ENSMUST00000016488.13	chr2	+	804	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	89	267	0	0	multi-exon	TRUE	canonical	3	201	junction_1	270.955139275859	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3425	False	NA	1	True	AATAAA	-17	NA	180829128	180830297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
ENSMUST00000016553.5	chrX	+	4230	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	0	0	0	0	multi-exon	TRUE	canonical	3	360	junction_3	33.4381425171914	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTAATGTGTGGATT	NA	False	NA	24	True	AATAAA	-24	NA	36390447	36414399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ENSMUST00000016569.11	chr5	+	7417	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	0	0	0	0	multi-exon	FALSE	canonical	2	103	junction_31	23.7978256399679	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTGCTAGAGAAAG	NA	False	NA	10	True	AATAAA	-39	NA	150597203	150734155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ENSMUST00000016571.8	chrX	-	419	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	0	0	0	0	multi-exon	FALSE	canonical	3	2951	junction_1	110	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTTATTTTTATGAA	2312	False	NA	-1	True	AATAAA	-20	NA	36454816	36451240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36451395_36453526_36453617_36454641
ENSMUST00000016631.14	chr6	+	4851	27	FSM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	0	0	0	0	multi-exon	TRUE	canonical	1	79	junction_5	45.7139938177494	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7539	False	NA	13	True	AATAAA	-17	NA	146789984	146933523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ENSMUST00000016638.8	chr1	+	2454	8	FSM	ENSMUSG00000016494.10	ENSMUST00000016638.8	2454	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.35526185435788	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTGGCCCTATAATG	1021	False	NA	NA	False	AATAAA	-43	NA	194621126	194643587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642243
ENSMUST00000016654.9	chr5	-	2131	5	FSM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	53.5863788662753	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTGCATTTGTGCTA	NA	False	NA	2	True	NA	NA	NA	146900597	146891329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900532
ENSMUST00000016664.8	chr5	-	4557	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGCCTCATGTTTCCTCG	4960	False	NA	NA	False	NA	NA	NA	147013396	146953464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ENSMUST00000016664.8-0	chr5	-	4114	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	0	443	0	-443	multi-exon	FALSE	canonical	3	45	junction_1	11.6724853214835	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCCTTCAGCTTACAT	4960	False	NA	-7	True	NA	NA	NA	147013396	146953907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ENSMUST00000016670.9	chr1	-	3164	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCATGCATCCTTTC	237	False	NA	NA	False	AATAAA	-25	NA	131066077	131055191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_131057983_131063996_131064109_131065816
ENSMUST00000016670.9-1	chr1	-	2178	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	0	986	0	-986	multi-exon	FALSE	canonical	3	221	junction_1	9	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGTTTTCATTCTCA	237	False	NA	-3	True	ATTAAA	-19	NA	131066077	131056177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_131057983_131063996_131064109_131065816
ENSMUST00000016672.11	chr1	-	2854	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	17.0105268787113	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCATTCTTTTTCTTC	NA	False	NA	-14	True	ACTAAA	-19	NA	131025563	130981436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
ENSMUST00000016678.14	chrX	-	1769	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	278.250982702667	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGTTTCAATTTGTAA	NA	False	NA	-1	True	AATAAA	-18	NA	37545331	37493938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUST00000016680.14	chr8	+	3728	20	FSM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	0	0	0	0	multi-exon	FALSE	canonical	2	216	junction_3	44.2424070515772	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13155620	13197940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13155904_13156193_13156310_13165469_13165574_13171676_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ENSMUST00000016681.15	chrX	-	3354	20	FSM	ENSMUSG00000031095.16	ENSMUST00000016681.15	3354	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	1064	junction_17	109.947758937101	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	8292	False	NA	-28	True	AATAAA	-20	NA	37653402	37622150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539
ENSMUST00000016696.13	chr15	-	4793	9	FSM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_8	9.62337648645214	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTCTGGCATTTTGG	8659	False	NA	2	True	AATAAA	-23	NA	77840922	77824721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ENSMUST00000016703.8	chr11	-	1993	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	0	0	0	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTAGCCTTGGCCACAA	NA	False	NA	9	True	AATAAA	-39	NA	115915330	115912786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ENSMUST00000016703.8-0	chr11	-	1663	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	0	330	0	-330	multi-exon	FALSE	canonical	3	12160	junction_3	927.451466235416	4360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTGTCAAACCTAAATT	NA	False	NA	-15	True	AATAAA	-14	NA	115915330	115913116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ENSMUST00000016771.13	chr15	-	7433	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	0	0	0	0	multi-exon	TRUE	canonical	3	307	junction_27	78.3427565254121	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGTGTCTGGGTGTTT	NA	False	NA	-2	True	AATAAA	-17	NA	77726375	77644786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ENSMUST00000016781.8	chr15	-	1013	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	104.002270274366	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	False	NA	-2	True	AATAAA	-14	NA	78058307	78043662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
ENSMUST00000016897.12	chr15	-	2060	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_11	7.21110255092798	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTTTATCTTATTATT	NA	False	NA	NA	False	NA	NA	NA	83395094	83367969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
ENSMUST00000016901.5	chr15	-	3774	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAGGTACTTCACATG	4671	False	NA	NA	False	AATATA	-19	NA	83479358	83459290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ENSMUST00000016901.5-0	chr15	-	3222	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	0	552	0	-523	multi-exon	FALSE	canonical	3	239	junction_9	15.0977093760069	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTTTCTCTTTGGG	4671	False	NA	-1	True	AGTAAA	-17	NA	83479358	83459842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ENSMUST00000016977.15	chr5	+	638	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	False	NA	51	True	AATAAA	-33	NA	100946492	100952337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ENSMUST00000016977.15-0	chr5	+	522	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	116	0	0	0	multi-exon	FALSE	canonical	3	1615	junction_5	130.796636042369	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	False	NA	51	True	AATAAA	-33	NA	100946608	100952337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ENSMUST00000017065.15	chr2	+	1666	7	FSM	ENSMUSG00000016921.15	ENSMUST00000017065.15	1666	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	407.538443994347	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTTAAAGTATTGCA	NA	False	NA	NA	False	NA	NA	NA	162773481	162776946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_162773698_162773913_162774063_162774734_162775003_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ENSMUST00000017090.6	chr17	-	2443	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_3	66.4090355298133	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCAACTGTGAATATC	NA	False	NA	-22	True	AATAAA	-20	NA	24292459	24266707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ENSMUST00000017153.4	chr2	-	2458	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	6.36396103067893	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCAGTTTTATTTTTG	NA	False	NA	47	True	AATAAA	-24	NA	164285106	164266166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ENSMUST00000017188.14	chr13	-	1504	8	FSM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	171.60728779539	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8459	False	NA	-7	True	AATAAA	-19	NA	34119979	34101909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609_34119778_34119904
ENSMUST00000017270.8	chr11	-	1542	8	FSM	ENSMUSG00000053654.8	ENSMUST00000017270.8	1542	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	18.9510648023497	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100160697	100153712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235
ENSMUST00000017276.14	chr11	-	3135	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	8.05665701282003	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCACTTCATGTTCTGCTC	8632	False	NA	-6	True	AATAAA	-16	NA	118139386	118055000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
ENSMUST00000017288.9	chr2	-	2828	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	50.2792203599061	1118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTGGGATGTTTTCTGC	NA	False	NA	-9	True	AATAAA	-16	NA	51039123	51020449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ENSMUST00000017290.11	chr11	-	6572	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	36.2819537137853	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442705	101379589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ENSMUST00000017332.4	chr11	-	886	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGCTAGTGTGTGGGGG	5502	False	NA	-5	True	AATAAA	-20	NA	101169940	101168793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101169279_101169539
ENSMUST00000017332.4-0	chr11	-	715	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	171	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGCTAGTGTGTGGGGG	5673	False	NA	-5	True	AATAAA	-20	NA	101169769	101168793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101169279_101169539
ENSMUST00000017354.13	chr11	-	3410	26	FSM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_19	25.7353919729232	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTGTGGGGACAGTT	NA	False	NA	-2	True	AATAAA	-23	NA	98620261	98595416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ENSMUST00000017365.15	chr11	+	2148	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_3	95.9435956889203	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGCACGGTGTCAG	NA	False	NA	16	True	AATAAA	-14	NA	98573379	98586805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ENSMUST00000017408.14	chr4	+	2790	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	0	0	0	0	multi-exon	TRUE	canonical	3	466	junction_4	49.4747234847138	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642885	148666858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUST00000017430.12	chr11	-	1434	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	76134551	76112335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUST00000017430.12-0	chr11	-	1100	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	50	284	0	0	multi-exon	FALSE	canonical	3	653	junction_6	49.1602926659311	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGGCAAATTCCTACTGT	NA	False	NA	-13	True	AATGAA	-20	NA	76134501	76112619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUST00000017435.11	chr11	-	11813	19	FSM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	7.82130676461247	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTCACTTTATTTTT	NA	False	NA	2	True	AATAAA	-19	NA	77476332	77419987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098
ENSMUST00000017443.14	chr2	+	1664	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTGTTTTTGTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	164587902	164610527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ENSMUST00000017443.14-0	chr2	+	1240	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	31	393	0	-393	multi-exon	FALSE	canonical	3	563	junction_10	65.6144039064594	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587933	164610134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ENSMUST00000017458.11	chr11	-	4089	13	FSM	ENSMUSG00000017314.13	ENSMUST00000017458.11	4089	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	3.83242742918897	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTCTGTTTGTCATTG	7667	False	NA	NA	False	ATTAAA	-17	NA	101979341	101947840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101976125_101976189_101979245
ENSMUST00000017530.4	chr11	-	2078	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_4	31.7525152109596	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCTGTCTCCTCCCA	NA	False	NA	1	True	NA	NA	NA	78056415	78050225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ENSMUST00000017534.15	chr11	+	1636	9	FSM	ENSMUSG00000017390.16	ENSMUST00000017534.15	2786	9	129	1021	-71	0	multi-exon	FALSE	canonical	3	130	junction_5	18.6547581061776	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCGCTCTGTCTGTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	78213922	78217586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUST00000017544.9	chr11	-	3050	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	5.98748695196908	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTTGGTGTATC	5359	False	NA	-2	True	ATTAAA	-15	NA	97944288	97927448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ENSMUST00000017548.7	chr11	+	751	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	9068	junction_1	2898.60244945732	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917749	97921318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUST00000017549.13	chr11	-	2809	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_10	13.5103890486136	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6248	False	NA	0	True	AATAAA	-14	NA	78067501	78056931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ENSMUST00000017552.13	chr11	-	3396	14	FSM	ENSMUSG00000020882.18	ENSMUST00000017552.13	3396	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	30.0140006777902	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTTTTCTTTGTTGTC	NA	False	NA	0	True	TATAAA	-33	NA	97913460	97892333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUST00000017561.15	chr11	-	2881	14	FSM	ENSMUSG00000017417.15	ENSMUST00000017561.15	2881	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	6.65462423196374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCGCGCCTGCGTGTA	6860	False	NA	-7	True	AATAAA	-17	NA	97877270	97814063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847393_97869328_97869508_97877063
ENSMUST00000017567.14	chr11	+	2245	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_8	108.208317610062	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274128	80287074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUST00000017572.14	chr11	+	2848	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCTTTCTTGAGTGCT	NA	False	NA	16	True	AATAAA	-20	NA	80319450	80364074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ENSMUST00000017572.14-1	chr11	+	1545	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	21	1282	0	57	multi-exon	FALSE	canonical	3	918	junction_5	68.6804624122448	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319471	80362792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ENSMUST00000017597.5	chr11	-	1998	8	FSM	ENSMUSG00000017453.5	ENSMUST00000017597.5	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	30.9654184996286	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784922	77771440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_77772081_77772326_77772403_77772943_77773103_77773442_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
ENSMUST00000017604.10	chr8	-	744	6	FSM	ENSMUSG00000006519.12	ENSMUST00000017604.10	744	6	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	96.6531944635044	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGACAAGAAATTCTCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	123159669	123151514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123151827_123152924_123153007_123153674_123153759_123153967_123154043_123154393_123154464_123159548
ENSMUST00000017610.10	chr11	-	3709	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGAAGGTTGATTCCTT	2266	False	NA	-7	True	AATAAA	-11	NA	118246332	118191894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
ENSMUST00000017610.10-0	chr11	-	1005	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	182	2522	182	110	multi-exon	FALSE	canonical	3	24	junction_3	3.74165738677394	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTCACGCTAGTGT	2448	False	NA	-9	True	AATAAA	-14	NA	118246150	118194416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
ENSMUST00000017620.10	chr11	-	4182	4	FSM	ENSMUSG00000025575.15	ENSMUST00000017620.10	4182	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	3.68178700572909	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	8958	False	NA	-1	True	AATAAA	-17	NA	118309912	118297114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399
ENSMUST00000017622.12	chr8	+	3810	19	FSM	ENSMUSG00000017478.16	ENSMUST00000017622.12	3810	19	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	72.8266375428831	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGGTCCTGGTAATG	905	False	NA	14	True	AATAAA	-15	NA	123103347	123144098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ENSMUST00000017629.12	chr14	-	5660	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	0	4675	0	1959	multi-exon	TRUE	canonical	3	144	junction_31	34.1687767724051	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGACTCTTTACTGAA	3843	False	NA	-1	True	ATTAAA	-13	NA	6104584	6038975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ENSMUST00000017637.13	chr11	+	2093	4	FSM	ENSMUSG00000017493.13	ENSMUST00000017637.13	3831	4	0	1738	0	734	multi-exon	FALSE	canonical	2	10	junction_3	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTGTGTTTGTTTGATT	4229	False	NA	27	True	AAAAAG	-8	NA	98932069	98943480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98932672_98939051_98939198_98939919_98940055_98942270
ENSMUST00000017692.15	chr11	+	4373	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	0	0	0	0	multi-exon	FALSE	canonical	3	1594	junction_3	192.466747488726	3379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883931	79924949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ENSMUST00000017694.7	chr11	+	7272	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	19.8640524191917	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTTATGGTTTTTTT	5999	False	NA	25	True	ATTAAA	-20	NA	79980225	80026617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ENSMUST00000017759.9	chr11	-	3720	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	46.4997013132582	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGTTCCCTCCATG	NA	False	NA	14	True	NA	NA	NA	78427097	78413675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
ENSMUST00000017783.13	chr11	+	7156	15	FSM	ENSMUSG00000017639.14	ENSMUST00000017783.13	7156	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	43.0135835213359	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79482037	79588849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ENSMUST00000017808.14	chr2	-	1843	11	FSM	ENSMUSG00000017664.17	ENSMUST00000017808.14	1843	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	88.3464204141854	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5702	False	NA	-34	True	AATAAA	-18	NA	165129747	165118473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125328_165125447_165125521_165129703
ENSMUST00000017821.12	chr11	-	2476	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_4	86.5338625914734	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCATGGGTTGCATT	975	False	NA	-8	True	ATTAAA	-28	NA	79145497	79130197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUST00000017831.16	chr11	+	3029	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_18	134.011803341732	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACCTTTTCAAGTATTTA	NA	False	NA	34	True	AATAAA	-45	NA	80099944	80157593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ENSMUST00000017836.8	chr11	+	3736	9	FSM	ENSMUSG00000017692.9	ENSMUST00000017836.8	3736	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	1.93649167310371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGGAGTGACCTCAAGG	7825	False	NA	NA	False	ATTAAA	-23	NA	80191737	80246781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80192098_80193489_80193514_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ENSMUST00000017839.3	chr11	+	1984	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	3.96074487943871	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGAGTTCATTGGGT	NA	False	NA	34	True	NA	NA	NA	80074676	80090583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
ENSMUST00000017841.4	chr2	-	1458	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	0	230	0	-230	multi-exon	FALSE	canonical	3	45	junction_1	12.1526108476007	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGCAGCACATGGTGAAT	NA	False	NA	-6	True	AATAAA	-18	NA	163592159	163568733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
ENSMUST00000017851.4	chr2	-	3683	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGATACCTTAGATTAAT	NA	False	NA	NA	False	AATAAA	-20	NA	163487051	163465191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ENSMUST00000017851.4-0	chr2	-	2293	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	0	1390	0	-1390	multi-exon	FALSE	canonical	3	366	junction_6	56.7393868903371	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTGTTTGTGTATTT	NA	False	NA	-10	True	ATTAAA	-15	NA	163487051	163466581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ENSMUST00000017859.10	chr11	+	2197	10	FSM	ENSMUSG00000017715.12	ENSMUST00000017859.10	2197	10	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_7	99.2782596518803	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877710	117914837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905472_117905549_117910432_117910559_117914230
ENSMUST00000017867.10	chr2	+	849	5	FSM	ENSMUSG00000017723.12	ENSMUST00000017867.10	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_3	30.4251129825347	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	113	False	NA	26	True	AATAAA	-32	NA	164404498	164410430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164404725_164405227_164405372_164405976_164406133_164407711_164407859_164410254
ENSMUST00000017891.14	chr11	-	2462	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	5.82961190818051	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATGTATGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	100661783	100656857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
ENSMUST00000017900.9	chr13	+	5142	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_9	57.8026758755535	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911815	73964873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ENSMUST00000017908.3	chr2	+	2705	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	0	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTCTTGTCTGGTTTA	8527	False	NA	16	True	AATAAA	-19	NA	164664605	164668791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164665121_164666601
ENSMUST00000017920.14	chr11	+	3642	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	120.5	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTTTGGCTTGGTGA	2098	False	NA	10	True	NA	NA	NA	75570084	75596891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75570491_75583022_75583559_75594191
ENSMUST00000017922.9	chr13	-	315	3	FSM	ENSMUSG00000017778.15	ENSMUST00000017922.9	315	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	5048	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGATGATCTGAAAATTG	NA	False	NA	-93	True	AAGAAA	-5	NA	86194893	86193013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_86193028_86193845_86193973_86194719
ENSMUST00000017945.15	chr11	+	1965	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	39.4052726193346	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8246	False	NA	18	True	AATAAA	-22	NA	100978125	100983033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUST00000017946.6	chr11	-	3165	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	11.6162601554889	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTTCGTTGTGTACT	9795	False	NA	1	True	AATAAA	-29	NA	101010719	100987338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ENSMUST00000017975.7	chr17	+	2366	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_1	72.5131712173726	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53786261	53814708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUST00000017981.10	chr11	+	2097	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	10.0332779621949	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCCGTCCCCTACCCCT	NA	False	NA	17	True	AATAAA	-24	NA	100513701	100518433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ENSMUST00000018002.13	chr2	+	2248	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	53.5787971122906	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859273	162888061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUST00000018005.10	chr2	+	3651	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	2736	junction_8	179.963737307165	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGACTCCTCCTTTTT	NA	False	NA	26	True	NA	NA	NA	162896606	162926608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUST00000018143.16	chr2	+	2714	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_12	71.8993045863449	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGTTGTCTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	166857112	166876867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ENSMUST00000018156.12	chr11	+	1076	6	FSM	ENSMUSG00000018012.12	ENSMUST00000018156.12	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	12.4739729036101	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCGCTGTCTGCCC	3798	False	NA	14	True	AATAAA	-14	NA	120612295	120614795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120612468_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
ENSMUST00000018184.10	chr15	-	1898	7	FSM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	50	2415	0	0	multi-exon	FALSE	canonical	3	832	junction_3	73.7437379639037	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCTCTCCTGAGCT	NA	False	NA	NA	False	AATAAA	-13	NA	83006952	83000048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUST00000018186.16	chr15	-	2422	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83056793	83037694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUST00000018186.16-0	chr15	-	2031	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	391	0	391	0	multi-exon	FALSE	canonical	3	1513	junction_1	61.7454451761423	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83056402	83037694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUST00000018212.13	chr11	-	5906	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_24	28.5226213829577	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148376	86101506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ENSMUST00000018246.6	chr13	+	1156	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGGGAGCTGAAGGGT	183	False	NA	NA	False	NA	NA	NA	23868181	23876891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_23868605_23876158
ENSMUST00000018274.10	chr11	-	3675	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	79.8474130764423	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	776	False	NA	-11	True	AATAAA	-22	NA	120882156	120852574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUST00000018287.10	chr5	+	2849	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCTGGATGGTGC	NA	False	NA	16	True	AATAAA	-21	NA	139777267	139788408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139777468_139784893_139784974_139785839
ENSMUST00000018295.14	chr15	+	1977	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_9	26.1878894826512	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4383	False	NA	18	True	AATAAA	-18	NA	79113581	79133666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUST00000018311.5	chr11	+	2070	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_11	11.573412528335	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAATGCAGGGTGTG	875	False	NA	-2	True	AATAAA	-1	NA	98249193	98271925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ENSMUST00000018313.6	chr15	-	1865	8	FSM	ENSMUSG00000018169.13	ENSMUST00000018313.6	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	11.4749060731561	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657675	78640081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78640845_78641496_78641583_78643392_78643559_78645005_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
ENSMUST00000018315.10	chr11	-	2787	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGCCTCATGGATTTTG	9872	False	NA	NA	False	AATAAA	-16	NA	86574662	86474690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
ENSMUST00000018315.10-0	chr11	-	1956	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	0	831	0	234	multi-exon	FALSE	canonical	3	615	junction_5	55.9317766244166	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTCCGTTTTCTTT	9872	False	NA	-3	True	TATAAA	-20	NA	86574662	86475521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
ENSMUST00000018333.13	chr1	+	1845	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTTGTTACCTAATTC	NA	False	NA	NA	False	ATTAAA	-13	NA	143653018	143683204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ENSMUST00000018333.13-0	chr1	+	1296	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	24	525	0	0	multi-exon	FALSE	canonical	3	576	junction_8	227.497274708951	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	25	True	NA	NA	NA	143653042	143682679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ENSMUST00000018337.9	chr1	-	2542	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	71	8973	71	-1612	multi-exon	FALSE	canonical	3	314	junction_10	26.4054178862975	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGTAGTGATTTTTAC	NA	False	NA	NA	False	ATTAAA	-7	NA	143578560	143483510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ENSMUST00000018353.14	chr2	+	5232	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_9	12.953763931769	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTCCCCTTTCTTCACA	NA	False	NA	18	True	AATAAA	-18	NA	163916057	163997444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ENSMUST00000018383.10	chr11	+	1267	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	30.2691628926573	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATGTAAGTTTCAAGT	NA	False	NA	14	True	TATAAA	-27	NA	53215505	53224128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
ENSMUST00000018429.12	chr11	+	3659	25	FSM	ENSMUSG00000020828.14	ENSMUST00000018429.12	3659	25	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	5.6248456768954	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70431131	70448936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ENSMUST00000018430.7	chr11	+	798	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	5742	junction_5	304.149305440601	1887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGTTTCTGTGTGAAGG	NA	False	NA	23	True	AATAAA	-13	NA	70416211	70418475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ENSMUST00000018431.13	chr11	-	1159	7	FSM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_3	39.5179284207392	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATGTGGATACTAGTCC	NA	False	NA	-9	True	AATAAA	-33	NA	70560242	70554596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
ENSMUST00000018437.3	chr11	-	861	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	0	0	0	0	multi-exon	FALSE	canonical	3	9692	junction_2	172	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACCTGTGTTGGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	70545470	70542675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70543048_70543612_70543806_70545174
ENSMUST00000018449.11	chr11	+	7442	42	FSM	ENSMUSG00000020850.15	ENSMUST00000018449.11	7442	42	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_5	157.019499238112	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTGCTGTTA	NA	False	NA	18	True	AATAAA	-15	NA	75377641	75400273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ENSMUST00000018466.4	chr2	-	2302	7	FSM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	196.655155030322	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5948	False	NA	-5	True	ATTAAA	-16	NA	163913022	163895459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912386
ENSMUST00000018470.10	chr2	+	3013	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_3	139.446620611616	760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTGTGGATTGATGTG	NA	False	NA	21	True	AATAAA	-16	NA	163836879	163860508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ENSMUST00000018476.14	chr15	-	2914	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	35.5343495789637	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	False	NA	2	True	AATAAA	-21	NA	35155952	34875641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ENSMUST00000018482.13	chr11	-	2810	18	FSM	ENSMUSG00000020400.18	ENSMUST00000018482.13	2810	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_17	76.4117873477302	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	6845	False	NA	-5	True	CATAAA	-18	NA	54853738	54801612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
ENSMUST00000018516.11	chr11	+	2696	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.3330523078346	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	5119	False	NA	10	True	AATAAA	-12	NA	106680100	106709679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ENSMUST00000018521.11	chr11	+	4583	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGACTGTTAATGCCGC	NA	False	NA	17	True	ATTAAA	-22	NA	87959104	87975555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ENSMUST00000018521.11-0	chr11	+	3582	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	0	1001	0	-1001	multi-exon	FALSE	canonical	3	100	junction_5	9.15641851380768	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCTATGACTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	87959104	87974554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ENSMUST00000018522.13	chr11	+	3180	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.85234995535981	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCAGCGGCGTGGGCT	3335	False	NA	23	True	AATAAA	-27	NA	87989971	88084966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
ENSMUST00000018547.9	chr11	-	2478	15	FSM	ENSMUSG00000020530.15	ENSMUST00000018547.9	2478	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	203.856892581686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCATTCGTTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	84761472	84723686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84745080_84745207_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ENSMUST00000018549.8	chr11	-	2477	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	44.51404272811	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	-4	True	AATAAA	-23	NA	84710341	84703886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
ENSMUST00000018556.11	chr11	-	5061	15	FSM	ENSMUSG00000018412.17	ENSMUST00000018556.11	5061	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	71.2238494796081	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	7559	False	NA	-2	True	NA	NA	NA	104359687	104224326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104359411
ENSMUST00000018561.14	chr1	-	4767	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATTTGCTGGATTACAA	NA	False	NA	NA	False	AATAAA	-16	NA	51955087	51789152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUST00000018561.14-0	chr1	-	3757	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	-13	1023	0	-1023	multi-exon	FALSE	canonical	3	256	junction_21	30.4396671028665	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCAGAATAGTTCATTCC	NA	False	NA	-7	True	ATTAAA	-24	NA	51955100	51790175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUST00000018568.4	chr11	+	1788	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_10	43.4117879536576	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGGAACTTGTGTTTCT	NA	False	NA	40	True	NA	NA	NA	60345416	60359580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUST00000018569.14	chr11	-	3813	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAGTATGTGGATTTTT	8527	False	NA	-8	True	ATTAAA	-7	NA	86698572	86659671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ENSMUST00000018569.14-0	chr11	-	2796	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	114	903	114	-903	multi-exon	FALSE	canonical	3	128	junction_4	18.4312056730034	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCAAGGCCTTCTTAT	8641	False	NA	-5	True	ATTAAA	-17	NA	86698458	86660574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ENSMUST00000018571.5	chr11	-	4847	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.94172168845741	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGAGAATGTCTGTT	NA	False	NA	-8	True	AATAAA	-16	NA	86884533	86827250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
ENSMUST00000018572.11	chr11	-	3758	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_2	49.6891336209437	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88755412	88721617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ENSMUST00000018577.8	chr11	-	3158	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_14	59.6645176908376	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGAAAATGTCTCTC	1101	False	NA	NA	False	TATAAA	-12	NA	107080207	107057488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUST00000018593.10	chr11	+	1100	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACTTTCCTGGAGATT	NA	False	NA	45	True	NA	NA	NA	70861038	70868659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
ENSMUST00000018593.10-0	chr11	+	806	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	294	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	48.3922055248111	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACTTTCCTGGAGATT	NA	False	NA	45	True	NA	NA	NA	70861332	70868659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
ENSMUST00000018614.3	chr11	+	2538	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	7.85293824331087	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCACGTCTGAAATTGCA	NA	False	NA	11	True	AATAAA	-20	NA	69217083	69223868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ENSMUST00000018625.10	chr11	-	6463	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	0	0	0	0	multi-exon	TRUE	canonical	3	360	junction_12	22.6180544894756	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCGATTGAATTGTGA	NA	False	NA	0	True	AATAAA	-25	NA	85125956	85078087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ENSMUST00000018625.10-1	chr11	-	4202	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	53	2208	53	-2208	multi-exon	FALSE	canonical	3	360	junction_12	22.6180544894756	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCACATGGATTATTTG	NA	False	NA	-12	True	AATAAA	-16	NA	85125903	85080295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ENSMUST00000018644.3	chr11	+	1845	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCACTGGCTTCTTGCA	8723	False	NA	NA	False	AATAAA	-20	NA	62139809	62157279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62140263_62155887
ENSMUST00000018653.8	chr11	-	1032	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	1369	junction_4	69.2639877569867	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACTATGACATATTTCT	8371	False	NA	-14	True	AATAAA	-19	NA	62430087	62415771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
ENSMUST00000018685.9	chr11	-	3105	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	12.1969435556112	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTAGAGCGATCTAC	7435	False	NA	-21	True	AATAAA	-19	NA	97657382	97636440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ENSMUST00000018691.9	chr11	-	5053	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATGTGAGTCCTTTG	NA	False	NA	-5	True	AATAAA	-22	NA	97635530	97605982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
ENSMUST00000018691.9-0	chr11	-	3548	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	0	1505	0	-1505	multi-exon	FALSE	canonical	3	13	junction_3	2.70801280154532	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTTTTCTTTCTCTTT	NA	False	NA	-1	True	TTTAAA	-21	NA	97635530	97607487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
ENSMUST00000018698.12	chr11	+	1673	9	FSM	ENSMUSG00000018554.14	ENSMUST00000018698.12	1673	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	26.1291862674673	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTCTGGCTCTTCT	NA	False	NA	21	True	AGTAAA	-24	NA	69826621	69832431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831258_69831415_69831594_69831871_69831957_69832051
ENSMUST00000018710.13	chr11	-	2524	11	FSM	ENSMUSG00000018566.15	ENSMUST00000018710.13	2524	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3.57910603363466	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTGTCCTGTGCTGGA	NA	False	NA	2	True	ATTAAA	-40	NA	69838975	69833368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69834399_69834884_69835089_69835612_69835715_69835827_69835933_69836094_69836283_69836388_69836552_69836663_69836780_69836894_69837020_69837111_69837285_69837393_69837511_69838774
ENSMUST00000018711.15	chr11	+	855	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	496	0	0	0	multi-exon	FALSE	canonical	3	795	junction_2	75.6350888587213	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCCTGTGTCATTCCAC	5224	False	NA	16	True	AATAAA	-26	NA	69882464	69885777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ENSMUST00000018713.13	chr11	+	1335	4	FSM	ENSMUSG00000018569.13	ENSMUST00000018713.13	1335	4	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_1	5.71547606649408	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTCCAGGCCGCTTTT	8743	False	NA	9	True	AATAAA	-19	NA	69856221	69858711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69856976_69857768_69857934_69858045_69858131_69858380
ENSMUST00000018716.10	chr11	+	2006	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_3	63.9193828192982	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2317	False	NA	16	True	AATAAA	-26	NA	69886602	69890835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ENSMUST00000018718.8	chr11	-	2020	19	FSM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	40.1080331229001	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGGGGTGATGGAGT	NA	False	NA	-57	True	NA	NA	NA	69906213	69901069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905942_69906022_69906088
ENSMUST00000018727.4	chr11	+	6703	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	0	0	0	0	multi-exon	TRUE	canonical	3	6361	junction_7	586.595613027527	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAATTCTCTTTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	55360510	55395664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUST00000018727.4-1	chr11	+	2711	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	33	3959	0	-3959	multi-exon	FALSE	canonical	3	6361	junction_7	586.595613027527	6646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCATCTGGCAATGT	NA	False	NA	13	True	ATTAAA	-14	NA	55360543	55391705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUST00000018737.13	chr11	-	2300	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_9	66.8521493786341	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3676	False	NA	-2	True	AATAAA	-22	NA	55310906	55285325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUST00000018743.5	chr11	+	2522	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	26.4701089281224	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619223	60623777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
ENSMUST00000018744.15	chr11	-	2858	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	0	0	0	0	multi-exon	TRUE	canonical	3	983	junction_2	78.1211180853749	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTCATATTATTTATT	NA	False	NA	-8	True	AATAAA	-19	NA	60702091	60678929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUST00000018744.15-0	chr11	-	1973	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	88	797	-86	0	multi-exon	FALSE	canonical	3	983	junction_2	78.1211180853749	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTGCTTACTCGG	NA	False	NA	-16	True	ATTAAA	-12	NA	60702003	60679726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUST00000018748.9	chr5	+	4856	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	231.190088764326	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119809082	119822789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ENSMUST00000018755.10	chr11	-	1182	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	18.9245578254523	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTAGTGTCTGGCCTGA	NA	False	NA	-2	True	AATAAA	-22	NA	53959840	53945753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ENSMUST00000018795.13	chr11	-	2151	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_10	48.5691259958423	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ENSMUST00000018803.12	chr11	-	1994	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	10.434983894999	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTAACTTGATTCCAT	NA	False	NA	-2	True	AATAAA	-25	NA	96834812	96828650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ENSMUST00000018805.15	chr11	+	3935	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATTTTTAAGAGGCTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	113539994	113553773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ENSMUST00000018805.15-0	chr11	+	3017	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	371	547	212	0	multi-exon	FALSE	canonical	3	202	junction_2	35.2900073021332	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540365	113553226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ENSMUST00000018816.14	chr11	+	930	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_8	11.8420595759353	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTTTCTTGACTTTG	775	False	NA	11	True	AATAAA	-22	NA	96740701	96752029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
ENSMUST00000018821.9	chr11	-	1487	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	38	160	0	0	multi-exon	FALSE	canonical	3	4398	junction_3	174.765959202208	3378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7726	False	NA	95	True	NA	NA	NA	102298332	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUST00000018841.3	chr11	-	1822	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	0	0	0	0	multi-exon	TRUE	canonical	3	481	junction_8	26.3136793744665	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTTCACTGTGAGT	NA	False	NA	0	True	AATAAA	-44	NA	84404348	84313680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ENSMUST00000018851.14	chr12	+	14342	77	FSM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_1	148.379081411613	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGCTGTGGGAATCC	6471	False	NA	39	True	AATAAA	-40	NA	110567885	110633379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ENSMUST00000018875.13	chr11	+	5625	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTGTGGTATGGACT	1959	False	NA	NA	False	AATAAA	-16	NA	83193308	83295861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUST00000018875.13-0	chr11	+	3382	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	220	2023	0	0	multi-exon	FALSE	canonical	3	76	junction_14	47.3312733095844	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAACTGCACCTTAT	2179	False	NA	NA	False	ATTAAA	-20	NA	83193528	83293838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUST00000018880.14	chr11	-	2382	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	15.9530561335438	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	68743961	68712259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ENSMUST00000018905.12	chr11	-	1321	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_4	37.1427426738163	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	6761	False	NA	-4	True	AATAAA	-33	NA	69553468	69547522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUST00000018909.4	chr11	+	2951	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_6	95.5459436279217	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ENSMUST00000018914.3	chr2	-	714	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	0	0	0	0	multi-exon	FALSE	canonical	3	2058	junction_4	989.165146727279	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741670	73738790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
ENSMUST00000018918.12	chr11	-	1230	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	17.4653943556966	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTCTTTCCTCATTAA	3250	False	NA	-1	True	AATAAA	-19	NA	69556979	69555038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
ENSMUST00000018965.4	chr19	-	1044	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_1	12	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCAGAGTGTGCTAC	NA	False	NA	-5	True	AATAAA	-15	NA	42117498	42111711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42112288_42113186_42113466_42117309
ENSMUST00000018966.8	chr19	-	1900	3	FSM	ENSMUSG00000018822.8	ENSMUST00000018966.8	1900	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTATCCAGTAGTTCT	NA	False	NA	2	True	AATAAA	-26	NA	42190691	42186409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42187471_42188219_42188298_42189930
ENSMUST00000018985.15-1	chr11	-	2329	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	0	1097	0	941	multi-exon	TRUE	canonical	3	107	junction_4	12.9099444873581	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTGTTTATGGACCA	NA	False	NA	78	True	AATAAA	-17	NA	82781440	82768621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ENSMUST00000018990.8	chr11	+	7376	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	14.5191444498481	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTCCTGCTTGTTTCA	NA	False	NA	15	True	AATAAA	-17	NA	35660310	35682112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
ENSMUST00000018992.4	chr11	-	2109	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_11	73.3093807511866	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	-1	True	AGTAAA	-17	NA	35725333	35699207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ENSMUST00000018993.7	chr11	-	4531	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_16	29.6517319327484	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTCATTTGTCCC	8117	False	NA	NA	False	AATAAA	-18	NA	35871354	35729226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ENSMUST00000019026.10	chr11	+	2431	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCCAGCTTAAAATTACT	NA	False	NA	14	True	NA	NA	NA	97206541	97220746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ENSMUST00000019026.10-0	chr11	+	1481	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	141	809	-51	-809	multi-exon	FALSE	canonical	3	2561	junction_3	172.211545276531	2318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206682	97219937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ENSMUST00000019038.15	chr11	+	3784	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	218.744622791053	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	696	False	NA	91	True	AATAAA	-16	NA	117157071	117253139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000019043.13	chr11	+	2069	10	FSM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.2573879677132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGGCTTTTTATTTA	NA	False	NA	10	True	TATAAA	-17	NA	53661320	53668149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53661518_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUST00000019044.8	chr11	-	3062	10	FSM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	3.67507453523138	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTGAATACAATCTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	53782486	53755367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
ENSMUST00000019050.12	chr11	+	2230	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_12	14.0816665680357	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAATAGCCTTATTTT	NA	False	NA	15	True	AATAAA	-17	NA	53991788	54022478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ENSMUST00000019064.9	chr11	-	1492	5	FSM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	0	1207	0	0	multi-exon	FALSE	canonical	2	5	junction_4	7.17635004720366	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGCCCCCATTGACAT	7600	False	NA	NA	False	NA	NA	NA	70350810	70346015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70346271_70346480_70346889_70349570_70349654_70349854_70349994_70350203
ENSMUST00000019065.10	chr11	-	3435	17	FSM	ENSMUSG00000018921.12	ENSMUST00000019065.10	3435	17	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_9	48.6591701917532	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTGTGCTGCTTTGGCT	NA	False	NA	-27	True	AATAAA	-13	NA	70300854	70283708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70283849_70284587_70286019_70286127_70286335_70286485_70286542_70287111_70287272_70287381_70287530_70287643_70287761_70287840_70287930_70288275_70288364_70288468_70288599_70288891_70289043_70289306_70289367_70292475_70292548_70292742_70292893_70296452_70296559_70297082_70297148_70300589
ENSMUST00000019067.8	chr11	+	902	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	11	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGAGTCTCTCTCTCGC	NA	False	NA	NA	False	AATAAA	-20	NA	70342744	70344553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70342890_70343033_70343165_70343927
ENSMUST00000019075.4	chr11	-	3302	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	67	810	67	-810	multi-exon	TRUE	canonical	3	156	junction_2	31	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTCTGCTTTTCTCT	6691	False	NA	-1	True	ATTAAA	-22	NA	60804571	60793881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60796948_60797707_60797827_60804454
ENSMUST00000019076.10	chr11	+	2198	12	FSM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_6	27.3405217988137	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAAGCCTGCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	60822858	60843637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUST00000019109.8	chr5	+	1764	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	0	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_1	0	1536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCCTGGCCTTGATTT	NA	False	NA	9	True	AATAAA	-20	NA	33176159	33185310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33176499_33183885
ENSMUST00000019118.8	chr5	-	4447	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113910571	113880506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ENSMUST00000019118.8-0	chr5	-	3573	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	872	2	0	0	multi-exon	FALSE	canonical	3	367	junction_17	27.7084133944819	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCTTGTGCATTGCAG	NA	False	NA	-18	True	ATTAAA	-14	NA	113909699	113880508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ENSMUST00000019128.15	chr5	-	2000	8	FSM	ENSMUSG00000000568.16	ENSMUST00000019128.15	2000	8	0	0	0	0	multi-exon	FALSE	canonical	3	1409	junction_2	1208.23732295085	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATCTATTAATTTAA	NA	False	NA	-10	True	AATAAA	-15	NA	100126796	100108456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ENSMUST00000019130.8	chr11	+	1816	3	FSM	ENSMUSG00000018986.11	ENSMUST00000019130.8	1816	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGCACAATGATGTTTC	3794	False	NA	NA	False	CATAAA	-14	NA	83082155	83105980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83082235_83103369_83104440_83105313
ENSMUST00000019135.14	chr11	-	3816	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	42.6075385788712	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3381	False	NA	-2	True	AATAAA	-15	NA	115494877	115475080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ENSMUST00000019143.9	chr6	-	6253	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGTCCAATCACCATTG	NA	False	NA	NA	False	AATAAA	-18	NA	34154046	34130314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ENSMUST00000019143.9-0	chr6	-	3617	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	141	2495	0	848	multi-exon	FALSE	canonical	3	204	junction_2	11.5223882983853	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	-24	True	TATAAA	-19	NA	34153905	34132809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ENSMUST00000019169.8	chr8	+	854	8	FSM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	107.997165495683	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	False	NA	22	True	AATAAA	-23	NA	71819860	71822376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUST00000019183.14	chr9	+	1746	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	26.2473926292634	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447084	108449973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ENSMUST00000019198.7	chr5	+	786	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	76.6823806359714	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	3268	False	NA	20	True	AATAAA	-21	NA	136990930	136995088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUST00000019199.14	chr4	-	2894	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	42	307	0	-307	multi-exon	FALSE	canonical	3	68	junction_3	12.7855049099544	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAGAGATGCCTGGGG	NA	False	NA	-3	True	ATTAAA	-16	NA	148021182	147994516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ENSMUST00000019220.16	chr7	+	3535	18	FSM	ENSMUSG00000030374.16	ENSMUST00000019220.16	3535	18	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	104.795467294144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTCCAGGCCATCTG	NA	False	NA	16	True	AATAAA	-16	NA	16549813	16574856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ENSMUST00000019224.9	chr15	+	1581	5	FSM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	0	665	0	84	multi-exon	FALSE	canonical	3	46	junction_1	6.01560470775798	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCAGTTTGGATCTTCT	9243	False	NA	16	True	CATAAA	-19	NA	76585664	76587774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
ENSMUST00000019229.15	chr4	+	1145	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	88.2754527349226	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266562	118272308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUST00000019231.12	chrX	+	2189	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	0	0	0	0	multi-exon	TRUE	canonical	3	647	junction_4	26.5934179176579	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTAGATTTTTTTTTC	NA	False	NA	46	True	NA	NA	NA	73340702	73348327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ENSMUST00000019266.6	chr11	-	3006	4	FSM	ENSMUSG00000019122.9	ENSMUST00000019266.6	3006	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	22.5141930543577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGGTTGTCTTGGTTCCA	NA	False	NA	NA	False	NA	NA	NA	83469462	83463744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_83466322_83466668_83466778_83467200_83467273_83469214
ENSMUST00000019268.11	chr6	-	4810	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGAGCCTCTTGTTTGT	NA	False	NA	0	True	AATAAA	-17	NA	54543474	54482874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ENSMUST00000019268.11-0	chr6	-	1492	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	100	3218	100	0	multi-exon	FALSE	canonical	3	46	junction_2	7.92824967172092	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCTTGTGTCTAAATGT	NA	False	NA	-3	True	AGTAAA	-18	NA	54543374	54486092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ENSMUST00000019276.12	chr13	+	4151	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	-515	2213	-515	1324	multi-exon	FALSE	canonical	3	109	junction_1	16.0370664399696	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGGCTACTCAGATGGAT	NA	False	NA	112	True	AATAAA	-14	NA	24985124	24997967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ENSMUST00000019283.10	chr8	+	1836	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	49.1426495012225	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047130	71049938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUST00000019287.9	chr18	+	2002	12	FSM	ENSMUSG00000019143.16	ENSMUST00000019287.9	2002	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	36.3770429831556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGGTCTTTTGAGGTTT	NA	False	NA	NA	False	GGGGCT	-45	NA	36916283	36924747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36923186_36923304_36923521_36923669_36924122
ENSMUST00000019302.10	chr7	+	815	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_1	16.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGACTCTGAGTGATA	NA	False	NA	16	True	ATTAAA	-17	NA	16186703	16189415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16187096_16188045_16188139_16189085
ENSMUST00000019302.10-0	chr7	+	631	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	184	0	0	0	multi-exon	FALSE	canonical	3	728	junction_1	16.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGACTCTGAGTGATA	NA	False	NA	16	True	ATTAAA	-17	NA	16186887	16189415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16187096_16188045_16188139_16189085
ENSMUST00000019323.11	chr5	+	1456	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	0	0	0	0	multi-exon	FALSE	canonical	3	4657	junction_8	277.596267085853	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTAGATTTCCTTT	453	False	NA	38	True	AGTAAA	-25	NA	135807333	135819245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUST00000019333.10	chr11	+	3570	11	FSM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	0	0	0	0	multi-exon	TRUE	canonical	3	286	junction_6	37.2538588605261	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9727	False	NA	12	True	AATAAA	-18	NA	44409790	44456347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ENSMUST00000019354.11	chr6	-	1312	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	False	NA	-3	True	ATTAAA	-19	NA	120799754	120772204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ENSMUST00000019354.11-0	chr6	-	1211	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	101	0	0	0	multi-exon	FALSE	canonical	3	841	junction_3	98.1488028454754	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTTGTTGTTCCTTATG	NA	False	NA	-3	True	ATTAAA	-19	NA	120799653	120772204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ENSMUST00000019362.15	chr11	+	2968	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_4	30.5160546571265	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7135	False	NA	12	True	AATAAA	-16	NA	69891420	69900937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ENSMUST00000019378.8	chr12	-	5463	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	14.4554030620371	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTGTTTTTGAAAATG	NA	False	NA	NA	False	AATAAA	-15	NA	85317373	85281293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
ENSMUST00000019382.17	chr8	-	1158	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	0	0	0	0	multi-exon	FALSE	canonical	3	3555	junction_3	302.48290814891	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321106	84298328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUST00000019386.10	chr16	-	3591	8	FSM	ENSMUSG00000005251.16	ENSMUST00000019386.10	3591	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	9.512612465478	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCAGACTATTATTTCTT	NA	False	NA	2	True	AATAAA	-22	NA	97564987	97543132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97545445_97547059_97547325_97548492_97548597_97549222_97549382_97551292_97551343_97552693_97552843_97556267_97556560_97564727
ENSMUST00000019405.4	chr8	+	3314	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	20.5236990384829	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGGTCTTACTGTCTT	NA	False	NA	13	True	AATAAA	-13	NA	71358575	71370171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ENSMUST00000019439.9	chr5	-	2828	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	8.99382504215469	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTCATTTTGTTTAAC	NA	False	NA	1	True	AATAAA	-19	NA	33815760	33810559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
ENSMUST00000019441.9	chr14	+	3694	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCAGTTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	55983149	55992957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ENSMUST00000019441.9-0	chr14	+	2254	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	0	1440	0	-1440	multi-exon	FALSE	canonical	3	658	junction_1	26.1788718880958	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTTTATTTTATTT	NA	False	NA	23	True	NA	NA	NA	55983149	55991517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ENSMUST00000019443.15	chr14	+	3485	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	30.6031044176894	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTCAGCATCCCGGGG	4174	False	NA	38	True	AATAAA	-41	NA	55829164	55841150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUST00000019447.15	chr11	-	1291	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCTTTGCCTTTGGGA	NA	False	NA	NA	False	GATAAA	-14	NA	100986262	100982648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ENSMUST00000019447.15-0	chr11	-	921	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	36	334	0	0	multi-exon	FALSE	canonical	3	316	junction_7	41.1021624139417	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATTTCCTCTGGATGAT	NA	False	NA	-21	True	TATAAA	-5	NA	100986226	100982982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ENSMUST00000019456.5	chr11	+	2397	15	FSM	ENSMUSG00000019312.11	ENSMUST00000019456.5	2397	15	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	7.18736135624932	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGTCCTGTCTGGCA	NA	False	NA	18	True	AATAAA	-18	NA	98337659	98346199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98338076_98341591_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
ENSMUST00000019464.8	chr17	+	2238	9	FSM	ENSMUSG00000019320.15	ENSMUST00000019464.8	2238	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2.89125837655509	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGTGCACTGAGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	24915207	24919503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24916099_24917193_24917383_24917491_24917573_24917759_24917836_24917918_24918097_24918242_24918425_24918517_24918632_24918871_24918990_24919094
ENSMUST00000019470.14	chr11	+	2664	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_6	119.560068584791	1858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207038	101214363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUST00000019482.8	chr3	-	4632	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	42.3657807080195	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGTGTTTGGTGCCT	NA	False	NA	-2	True	AAAAAG	-13	NA	94922549	94914012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
ENSMUST00000019506.9	chr8	-	616	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	1764	junction_2	46	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGTGTGCTGTTTGGT	9834	False	NA	-7	True	AATAAA	-12	NA	84976348	84972866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84973323_84976102_84976159_84976244
ENSMUST00000019512.8	chr11	+	2956	12	FSM	ENSMUSG00000019368.14	ENSMUST00000019512.8	2956	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	3.13603423830188	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	3981782	3998024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3981900_3985122_3985199_3989435_3989480_3989770_3989831_3989936_3990126_3991736_3991833_3992190_3992252_3993286_3993371_3993652_3993760_3993832_3993973_3994063_3994234_3996212
ENSMUST00000019514.10	chr7	-	2290	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16658039	16649303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
ENSMUST00000019514.10-0	chr7	-	716	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	146	1428	-139	337	multi-exon	FALSE	canonical	3	2296	junction_1	82.9925297843125	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGACTGCTCTCTCT	NA	False	NA	-8	True	GATAAA	-22	NA	16657893	16650731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
ENSMUST00000019517.10	chr11	-	1646	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_5	45.2577558304642	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGTGTGTTCTCTCA	NA	False	NA	-4	True	ATTAAA	-27	NA	59730664	59708620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUST00000019576.15	chr8	+	1656	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	2216	junction_5	95.6715736256073	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAACGTGCCATCTTTTT	NA	False	NA	99	True	NA	NA	NA	84441805	84449977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUST00000019577.10	chr8	+	1522	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_1	101.245027312731	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACTCATTCTGTAGAC	NA	False	NA	16	True	NA	NA	NA	84379305	84391323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
ENSMUST00000019605.4	chr11	+	1927	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	3.33749739908346	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGGATGTGATGGGA	NA	False	NA	22	True	TATAAA	-22	NA	69737501	69741869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUST00000019611.15	chr10	-	2218	16	FSM	ENSMUSG00000019467.16	ENSMUST00000019611.15	2218	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	11.8291541916102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGAGGTTGTTGTCTT	4937	False	NA	-7	True	AATAAA	-12	NA	127025888	127018397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127025363_127025479_127025735
ENSMUST00000019614.13	chr8	-	2677	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_12	44.2084358744927	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1011	False	NA	-4	True	AATACA	-16	NA	3671316	3660086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ENSMUST00000019615.11	chr9	-	1642	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	0	6209	0	1522	multi-exon	FALSE	canonical	3	1564	junction_6	89.7352113903194	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061278	21050726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ENSMUST00000019631.11	chr17	+	2224	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_12	30.2353686068634	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGTGTGGAATAAATG	NA	False	NA	NA	False	GATAAA	-13	NA	57556481	57570665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ENSMUST00000019638.15	chr5	+	1787	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	0	0	0	0	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGATTTTTTCTTGAG	NA	False	NA	NA	False	AATAAA	-17	NA	138159332	138162908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUST00000019638.15-0	chr5	+	1090	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	29	668	0	0	multi-exon	FALSE	canonical	3	3954	junction_1	284.410501446999	2236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGCCCTTCCAGTGGC	NA	False	NA	11	True	AATAAA	-12	NA	138159361	138162240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUST00000019649.4	chr11	+	1499	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	0	0	0	0	multi-exon	FALSE	canonical	3	35417	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62441996	62444039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62442422_62442965
ENSMUST00000019660.11	chr5	+	8261	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTAAATCCTCATTT	NA	False	NA	4	True	NA	NA	NA	138083345	138106084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
ENSMUST00000019660.11-0	chr5	+	4749	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	36	3476	0	-145	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTGTAGAGAGACTG	NA	False	NA	NA	False	ATTAAA	-21	NA	138083381	138102608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
ENSMUST00000019662.11	chr5	+	3479	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_6	9.89356624586021	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGGTGCATTCCTATA	8077	False	NA	18	True	NA	NA	NA	138170263	138178691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ENSMUST00000019677.12	chr4	+	2543	13	FSM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_1	27.9607860325055	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696394	115736447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUST00000019679.12	chr8	-	2263	8	FSM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	11.6741472616082	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCATTTTTCTCACCT	4668	False	NA	0	True	TTTAAA	-1	NA	70687116	70672821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
ENSMUST00000019683.11	chr7	-	1462	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	35.1362427637839	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGTC	6660	False	NA	-4	True	AATAAA	-25	NA	44741645	44732336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
ENSMUST00000019697.9	chr7	-	2187	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_13	34.9573373142001	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCACTGCCCAGTTTT	NA	False	NA	-9	True	AATAAA	-10	NA	30364419	30353140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ENSMUST00000019701.9	chrX	+	2722	4	FSM	ENSMUSG00000031383.9	ENSMUST00000019701.9	2722	4	0	0	0	0	multi-exon	TRUE	canonical	3	583	junction_1	9.62635271879577	1216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGAGGTTGTTGCTTCTT	NA	False	NA	28	True	AATAAA	-22	NA	72683024	72687120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72683248_72683798_72684411_72684952_72685409_72685689
ENSMUST00000019708.12	chr10	+	2986	9	FSM	ENSMUSG00000019564.13	ENSMUST00000019708.12	5361	9	0	2375	0	0	multi-exon	FALSE	canonical	3	22	junction_1	9.40661336507459	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAGAAAAGCAAAA	1847	False	NA	NA	False	NA	NA	NA	79762876	79788477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79763091_79766468_79767123_79767599_79767913_79782318_79782392_79784693_79784878_79785198_79785447_79786461_79786759_79787081_79787181_79787573
ENSMUST00000019721.7	chr6	-	3484	11	FSM	ENSMUSG00000019577.7	ENSMUST00000019721.7	3484	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	4.42831796509691	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGTCTTATAAAATTC	-3	True	NA	NA	False	AATAAA	-19	NA	5496309	5483350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_5485593_5486677_5486792_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5491678_5491829_5492015_5492705_5492778_5494889_5495032_5496032
ENSMUST00000019722.12	chr17	-	1733	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	11	1205	0	0	multi-exon	FALSE	canonical	3	209	junction_10	25.0960156200143	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCCAGTGTTTCATCA	6317	False	NA	-2	True	AATAAA	-17	NA	56382017	56375249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ENSMUST00000019723.8	chr17	-	1710	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAACCACCTGAAGCCA	NA	False	NA	-29	True	NA	NA	NA	56490920	56482743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ENSMUST00000019723.8-0	chr17	-	907	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	0	803	0	-803	multi-exon	FALSE	canonical	3	1137	junction_1	57.4505004329814	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGATGGATTCTCATC	NA	False	NA	-6	True	AATAAA	-43	NA	56490920	56483546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ENSMUST00000019726.8	chr17	-	3645	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	0	0	0	multi-exon	TRUE	canonical	3	548	junction_7	40.8821102534533	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTAATCTCACCATC	NA	False	NA	NA	False	NA	NA	NA	56597511	56584475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ENSMUST00000019726.8-0	chr17	-	2161	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	1484	0	-1484	multi-exon	FALSE	canonical	3	548	junction_7	40.8821102534533	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGTGTATATGTGTG	NA	False	NA	-3	True	AATAAA	-23	NA	56597511	56585959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ENSMUST00000019734.11	chr11	-	2741	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	37.6690854680599	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105835238	105824527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
ENSMUST00000019749.4	chr2	+	2634	2	FSM	ENSMUSG00000027102.5	ENSMUST00000019749.4	2634	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGAGCTCTTTCGTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	74535248	74538277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_74536463_74536857
ENSMUST00000019803.9	chr9	+	834	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_3	22.4258035902098	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTAGTTGCTCTGGAT	8482	False	NA	29	True	AATAAA	-29	NA	110485570	110540674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
ENSMUST00000019808.12	chr17	-	1986	9	FSM	ENSMUSG00000011305.12	ENSMUST00000019808.12	1986	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.19912097301743	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGTTTTGGAACTTGGG	9995	False	NA	NA	False	AATAAA	-20	NA	56424596	56418600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56419542_56419869_56419984_56420898_56421099_56422092_56422274_56422550_56422634_56423257_56423454_56423828_56423890_56424082_56424198_56424501
ENSMUST00000019833.5	chr6	+	479	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGGTTTTTGTGTGCT	9929	False	NA	9	True	ATTAAA	-17	NA	38511757	38516384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38511946_38516093
ENSMUST00000019854.13	chr3	+	1226	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAAGCTTTATAAAT	NA	False	NA	26	True	AATAAA	-28	NA	87826812	87830979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000019854.13-0	chr3	+	972	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	30	224	0	-214	multi-exon	FALSE	canonical	3	263	junction_1	297.101329515706	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	51	True	AATAAA	-29	NA	87826842	87830755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000019859.9	chr2	+	4030	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTGGTGCTGCATGCAGGT	NA	False	NA	NA	False	AATAAA	-13	NA	29825437	29850383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUST00000019859.9-0	chr2	+	3087	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	2	941	0	-941	multi-exon	FALSE	canonical	3	458	junction_9	44.6713430387859	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGTTACCTCAATATT	NA	False	NA	18	True	AATAAA	-28	NA	29825439	29849442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUST00000019861.13	chr1	-	3958	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853608	33800625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ENSMUST00000019861.13-0	chr1	-	3796	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-43	205	0	-205	multi-exon	FALSE	canonical	3	234	junction_7	31.7753594690564	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTCCAGAAATTCTC	NA	False	NA	-12	True	AATAAA	-16	NA	33853651	33800830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ENSMUST00000019862.3	chr12	-	1831	5	FSM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	3.20156211871642	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAAGGAGTCAACTTCT	NA	False	NA	NA	False	CATAAA	-14	NA	72132213	72120201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_72120811_72123917_72124056_72124137_72124261_72126260_72126431_72131422
ENSMUST00000019876.12	chr8	-	1769	9	FSM	ENSMUSG00000019732.15	ENSMUST00000019876.12	1769	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	4.64858849544676	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATATTTTGTTT	9998	False	NA	NA	False	AATAAA	-15	NA	73197714	73178019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73178600_73179610_73179704_73181005_73181138_73181913_73182010_73185216_73185406_73188633_73188729_73192275_73192480_73197238_73197341_73197436
ENSMUST00000019878.8	chr7	-	2222	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGGCACCATCAATACT	8703	False	NA	-19	True	AAAACA	-45	NA	3668839	3663096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ENSMUST00000019878.8-0	chr7	-	880	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	372	970	372	-970	multi-exon	FALSE	canonical	3	158	junction_3	1.69967317119759	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAATAGGTTTACC	9075	False	NA	NA	False	TATAAA	-25	NA	3668467	3664066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ENSMUST00000019882.16	chr7	+	819	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCGTGTTTATTTC	NA	False	NA	18	True	AATAAA	-18	NA	29931372	29932815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUST00000019882.16-0	chr7	+	431	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	384	4	0	0	multi-exon	FALSE	canonical	3	1146	junction_5	44.9239357136037	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGTTTCCCGTGTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29931756	29932811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUST00000019907.8	chr10	-	1940	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_1	15.5623744974859	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755600	5749159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
ENSMUST00000019908.9	chr10	-	1416	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	0	1172	0	153	multi-exon	FALSE	canonical	3	26	junction_4	9.49853789918334	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGACAGTTGTTTTATGC	NA	False	NA	-2	True	TATAAA	-19	NA	5773910	5763058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
ENSMUST00000019911.14	chr10	+	2005	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	0	0	0	0	multi-exon	TRUE	canonical	3	1084	junction_4	88.4199902429095	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	False	NA	14	True	ATTAAA	-15	NA	36850539	36877885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ENSMUST00000019917.6	chr10	-	1090	7	FSM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_2	78.0243907733701	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTTACTTCCTCTTA	NA	False	NA	-23	True	AATAAA	-23	NA	33895620	33872550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
ENSMUST00000019924.9	chr10	-	2550	5	FSM	ENSMUSG00000019789.10	ENSMUST00000019924.9	2550	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGGAGGAGTTGCT	NA	False	NA	NA	False	ATTAAA	-19	NA	30718797	30708354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_30710424_30713470_30713553_30716386_30716471_30716599_30716679_30718561
ENSMUST00000019925.7	chr10	-	509	5	FSM	ENSMUSG00000019791.13	ENSMUST00000019925.7	509	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	90.3562394082445	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGACAAGTTCCTTAC	NA	False	NA	-32	True	AATAAA	-8	NA	30494333	30484378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_30484420_30486312_30486458_30487643_30487714_30490708_30490827_30494198
ENSMUST00000019927.7	chr10	-	1815	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	54	490	0	0	multi-exon	FALSE	canonical	3	159	junction_10	17.7080882335979	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	-2	True	AATAAA	-23	NA	30476691	30410710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ENSMUST00000019929.13	chr10	+	1774	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_4	21.6323831327018	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601763	7638913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ENSMUST00000019931.12	chr10	+	3386	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_6	23.7065391822594	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7265	False	NA	23	True	AATAAA	-30	NA	7465580	7501247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ENSMUST00000019937.5-1	chr10	+	3791	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	119	2122	0	0	multi-exon	FALSE	canonical	3	208	junction_15	23.0789947788026	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTTTTGTTATTGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	42637610	42706388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ENSMUST00000019939.12	chr10	+	1401	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	2006	junction_3	141.176800108548	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378026	42411366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ENSMUST00000019942.6	chr10	-	1439	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCAGAGAATGGCTG	NA	False	NA	NA	False	AATAAA	-17	NA	13744701	13528194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ENSMUST00000019942.6-0	chr10	-	1046	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	128	265	0	-265	multi-exon	FALSE	canonical	3	37	junction_1	33.5654584357193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACGGAAGCAGACTGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	13744573	13528459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ENSMUST00000019944.9	chr10	+	765	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	360	341	360	-341	multi-exon	FALSE	non_canonical	0	0	junction_3	288.190631353623	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTGAGCTCTTCCACC	NA	False	NA	33	True	TTTAAA	-19	NA	13428997	13438779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ENSMUST00000019945.15	chr10	-	2129	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	16.7987602848376	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTTAGCCATTAATTT	NA	False	NA	NA	False	AATAAA	-34	NA	13428883	13399859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ENSMUST00000019950.6	chr10	-	2297	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGTTTTGATGAGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	13068912	13053883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ENSMUST00000019950.6-0	chr10	-	1836	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	0	461	0	-461	multi-exon	FALSE	canonical	3	645	junction_7	42.5845042239545	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGGAATTGGTGTGCTC	NA	False	NA	-23	True	GATAAA	-25	NA	13068912	13054344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ENSMUST00000019951.16	chr10	-	2177	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	38.3583107031579	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	390	False	NA	-1	True	AATAAA	-20	NA	41685603	41594841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ENSMUST00000019962.15	chr10	+	2922	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	0	0	0	0	multi-exon	FALSE	canonical	3	1648	junction_4	8.82269800004511	2736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395409	41407044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ENSMUST00000019965.13	chr10	-	1602	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_9	17.8020667408847	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTACCTTGTTCCTT	NA	False	NA	0	True	AATAAA	-20	NA	41366336	41363167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
ENSMUST00000019967.16	chr10	+	3563	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	27.5095446574272	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9093	False	NA	29	True	AATAAA	-18	NA	41352309	41363026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUST00000019975.14	chr10	+	2609	9	FSM	ENSMUSG00000019831.15	ENSMUST00000019975.14	2609	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	81.4024531264261	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTCGCTCTTCGAG	NA	False	NA	17	True	AATAAA	-19	NA	40759470	40814565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_40759606_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
ENSMUST00000019977.8	chr10	+	3000	5	FSM	ENSMUSG00000063428.9	ENSMUST00000019977.8	3000	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGTGTGATCTCTT	NA	False	NA	NA	False	AATAAA	-16	NA	40506006	40525927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40523469
ENSMUST00000019982.9	chr10	-	887	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGGATTCGATTT	8581	False	NA	NA	False	NA	NA	NA	40133672	40125345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
ENSMUST00000019982.9-0	chr10	-	713	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	0	174	0	0	multi-exon	FALSE	canonical	3	216	junction_5	179.465205541353	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTCTTGTATGCAATT	8581	False	NA	-16	True	AAAACA	-21	NA	40133672	40125519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
ENSMUST00000019986.13	chr10	+	10713	32	FSM	ENSMUSG00000019841.16	ENSMUST00000019986.13	10713	32	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	17.5666413596239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGACTTTTATCTTAA	NA	False	NA	18	True	AATAAA	-14	NA	39608113	39751207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ENSMUST00000019987.7	chr10	+	2081	9	FSM	ENSMUSG00000019842.7	ENSMUST00000019987.7	2867	9	304	482	304	0	multi-exon	FALSE	canonical	3	53	junction_2	7.56534037568701	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTTTATCTCAGTGG	NA	False	NA	5	True	AATAAA	-18	NA	39489233	39530821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39489343_39501845_39502656_39510530_39510721_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ENSMUST00000019991.8	chr10	+	2929	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCTCTGTGTTAAGTCC	NA	False	NA	NA	False	AATATA	-18	NA	39010018	39027054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ENSMUST00000019991.8-0	chr10	+	2073	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	0	856	0	105	multi-exon	FALSE	canonical	3	143	junction_3	7.58423767804153	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	16	True	AATAAA	-16	NA	39010018	39026198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ENSMUST00000019994.14	chr10	+	1853	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGATGACTTTCTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	45165400	45194548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
ENSMUST00000019994.14-0	chr10	+	1421	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	97	335	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTATTCCTTACTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	45165497	45194213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
ENSMUST00000019997.11	chr10	-	4422	9	FSM	ENSMUSG00000019850.12	ENSMUST00000019997.11	4422	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.927024810886958	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGCTTTCTGTTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	18891158	18876657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_18878764_18879323_18879506_18880204_18881080_18881298_18881480_18882610_18882782_18882929_18883078_18883892_18884084_18887228_18887539_18890900
ENSMUST00000019998.9	chr10	+	1952	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	1	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTCTGCTTTGTAGT	NA	False	NA	12	True	AATAAA	-14	NA	18720767	18732821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_18721155_18729284_18729426_18731397
ENSMUST00000020000.7	chr10	-	1086	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	189	1260	0	0	multi-exon	FALSE	canonical	3	26	junction_2	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTTGCCTCCGCTGTT	NA	False	NA	NA	False	AGTAAA	-22	NA	18421635	18416505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
ENSMUST00000020004.8	chr10	+	2201	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTTTGTCTAACTACA	1521	False	NA	NA	False	AATAAA	-35	NA	53473047	53485321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ENSMUST00000020004.8-0	chr10	+	1035	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	0	1166	0	77	multi-exon	FALSE	canonical	3	699	junction_3	57.7119282875444	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTCTAATGTGTTA	1521	False	NA	6	True	TATAAA	-19	NA	53473047	53484155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ENSMUST00000020008.10	chr10	-	4216	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGTTTATTATGGGT	NA	False	NA	-27	True	AATAAA	-26	NA	52258171	52213147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ENSMUST00000020008.10-0	chr10	-	3138	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	-49	1127	0	-1119	multi-exon	FALSE	canonical	3	117	junction_5	13.2125481483107	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGCTCCTGATAGGCT	NA	False	NA	-13	True	AATAAA	-15	NA	52258220	52214274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ENSMUST00000020012.7	chr10	-	1981	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	11.040380428228	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGGATTTTACTATAAT	NA	False	NA	NA	False	TATAAA	-6	NA	43777741	43750183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ENSMUST00000020018.12	chr10	-	1219	7	FSM	ENSMUSG00000019868.17	ENSMUST00000020018.12	1219	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	268.946504387438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTACCAGAATAG	NA	False	NA	-32	True	ATTAAA	-6	NA	14581244	14531098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14581093
ENSMUST00000020023.9	chr10	-	5430	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTATTTTTTTTTCTT	NA	False	NA	1	True	AATAAA	-24	NA	66932724	66844967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ENSMUST00000020023.9-0	chr10	-	937	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	0	4493	0	-2010	multi-exon	FALSE	canonical	3	113	junction_7	23.5068379109447	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTTTCTAACCTGATG	NA	False	NA	-10	True	AATAAA	-16	NA	66932724	66849460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ENSMUST00000020027.11	chr10	-	2880	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	57408626	57391869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ENSMUST00000020027.11-0	chr10	-	2827	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	53	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	44.2279252848243	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTGGTAGCATTACA	NA	False	NA	NA	False	AATAAA	-16	NA	57408573	57391869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ENSMUST00000020034.6	chr10	+	2276	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	67	1513	67	396	multi-exon	FALSE	canonical	3	81	junction_5	6.04648658313239	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACCTATGGATCTTTTTCC	NA	False	NA	17	True	AATAAA	-33	NA	29189562	29221952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUST00000020049.9	chr10	+	969	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	437	407	0	-407	multi-exon	FALSE	canonical	3	411	junction_3	54.9201440477192	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGCTCACAGTGAGATA	NA	False	NA	10	True	AATATA	-16	NA	105677364	105683287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ENSMUST00000020078.14	chr10	+	4327	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	23.8875968642854	584	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTACATATCATTTAG	NA	False	NA	10	True	AATAAA	-19	NA	58159287	58260513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ENSMUST00000020081.11	chr10	+	1834	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_7	94.1772102940808	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTCCTTGTTGCATT	NA	False	NA	10	True	AATAAA	-23	NA	72490676	72510796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ENSMUST00000020085.7	chr10	-	1431	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	5.39804491356722	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTTGACTACTTAATGCA	NA	False	NA	0	True	AATAAA	-18	NA	71121092	71090809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
ENSMUST00000020099.13	chr10	-	4375	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	0	0	0	0	multi-exon	TRUE	canonical	3	2056	junction_1	102.156542539739	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGACTTAAGCAGATGTTT	NA	False	NA	4	True	AATAAA	-23	NA	69188768	69170975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ENSMUST00000020099.13-0	chr10	-	1169	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	28	3178	0	0	multi-exon	FALSE	canonical	3	2056	junction_1	102.156542539739	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTCTGTATATGTGCA	NA	False	NA	-28	True	TTTAAA	-1	NA	69188740	69174153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ENSMUST00000020107.8	chr10	+	7130	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGAC	NA	False	NA	12	True	AATAAA	-24	NA	98751013	98862005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ENSMUST00000020107.8-0	chr10	+	5065	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	0	2065	0	255	multi-exon	FALSE	canonical	3	93	junction_1	42.6978922196401	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTTTAGTCTTTTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	98751013	98859940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ENSMUST00000020109.5	chr10	-	1705	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	22.702422778197	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCTGTTTAATGTTTA	NA	False	NA	-18	True	AATAAA	-21	NA	89568157	89547832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ENSMUST00000020112.7	chr10	+	6448	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_11	11.4144645078076	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580852	89655733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ENSMUST00000020113.15	chr10	+	2862	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	10.2158522093674	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAATGAAATGTA	NA	False	NA	NA	False	NA	NA	NA	98942897	99033850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ENSMUST00000020118.5	chr10	+	2796	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGTTTTTATTTTTAAG	NA	False	NA	9	True	AATAAA	-19	NA	99099092	99103350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_99099954_99100405_99100844_99101853
ENSMUST00000020123.7	chr10	-	3772	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	318.417266421838	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTGTGTGGTCTCCAG	NA	False	NA	-18	True	AATAAA	-16	NA	91007440	90996278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ENSMUST00000020145.12	chr10	+	2456	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	88.4218850289119	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATGTGTTAACTTT	NA	False	NA	18	True	AATAAA	-24	NA	21870564	21875802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000020149.6	chr10	+	3232	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	27	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGAGAGTACTGTCCAT	755	False	NA	13	True	AATAAA	-19	NA	90918918	90934519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_90919159_90929000_90929119_90931645
ENSMUST00000020150.10	chr10	+	1328	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	32.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTTTGCTCCATAAT	638	False	NA	12	True	AATAAA	-17	NA	90918801	90938469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_90919159_90929000_90929119_90937616
ENSMUST00000020153.10	chr10	+	2793	18	FSM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	231.196571495514	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171877	21244797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUST00000020157.13	chr10	-	6577	27	FSM	ENSMUSG00000019979.13	ENSMUST00000020157.13	6577	27	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_26	18.4606169641815	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATTTTGGTTTCGGG	NA	False	NA	NA	False	AATAAA	-18	NA	90918632	90825179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915994_90918044
ENSMUST00000020158.9	chr10	-	3074	15	FSM	ENSMUSG00000019982.16	ENSMUST00000020158.9	3074	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	4.58257569495584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTGTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	21036883	21001174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
ENSMUST00000020159.15	chr10	+	4798	29	FSM	ENSMUSG00000019984.17	ENSMUST00000020159.15	4798	29	0	0	0	0	multi-exon	TRUE	canonical	2	39	junction_7	9.84419439392103	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGACTGCTTTGTAAC	NA	False	NA	13	True	AATAAA	-20	NA	24745944	24789358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ENSMUST00000020163.7	chr10	-	3534	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_9	20.2858400398517	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	False	NA	-1	True	AATAAA	-19	NA	92558282	92520607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ENSMUST00000020171.12	chr10	+	2398	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	4.81534007106456	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTTGGCTGTTCAT	NA	False	NA	5	True	AATAAA	-21	NA	24471339	24474576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
ENSMUST00000020173.16	chr10	+	4252	18	FSM	ENSMUSG00000019996.18	ENSMUST00000020173.16	4252	18	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_11	29.0770364453276	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTATTTATTTAAAT	NA	False	NA	14	True	ATTAAA	-19	NA	20024216	20157268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUST00000020182.16	chr10	-	1436	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	38	6625	0	264	multi-exon	FALSE	canonical	3	127	junction_4	9.53874490281544	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATTTATGACATGTCAA	NA	False	NA	-9	True	AATAAA	-19	NA	19783397	19736270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
ENSMUST00000020188.13	chr10	+	2112	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	3.14907393794853	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTTGGATATTCATTTA	NA	False	NA	17	True	AGTAAA	-18	NA	19467696	19485977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
ENSMUST00000020203.7	chr10	-	497	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	0	364	0	-364	multi-exon	FALSE	canonical	3	2132	junction_3	195.841772867792	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTTGTGGACTATTTA	NA	False	NA	-5	True	AATAAA	-24	NA	93425568	93419254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
ENSMUST00000020208.5	chr10	+	8044	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTGTGAAGTCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	93871862	93981201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
ENSMUST00000020208.5-1	chr10	+	4699	21	FSM	ENSMUSG00000020021.5	ENSMUST00000020208.5	8044	21	0	3345	0	2123	multi-exon	FALSE	canonical	3	10	junction_10	4.04474968323134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGGTCATAACTGTTT	NA	False	NA	2	True	ATTAAA	-14	NA	93871862	93977856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_93872173_93879163_93881496_93910044_93910193_93925438_93925507_93925593_93925625_93936263_93936416_93939103_93939261_93941846_93941935_93956314_93956366_93959100_93959160_93959405_93959478_93960751_93960821_93961410_93961495_93963230_93963311_93969141_93969245_93969862_93970007_93970878_93970982_93973297_93973426_93974145_93974275_93975600_93975750_93977614
ENSMUST00000020209.16	chr10	+	1110	4	FSM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	0	0	0	0	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCAAGATGTTCTATTT	NA	False	NA	11	True	NA	NA	NA	94034816	94057305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
ENSMUST00000020212.6	chr10	+	3639	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	58.1305045183297	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCCACATTTGTTAC	9504	False	NA	NA	False	ATTAAA	-13	NA	94524515	94626715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUST00000020215.16	chr10	-	2222	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	23.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGTTGTAGGTGTA	NA	False	NA	2	True	AATAAA	-32	NA	95252719	95247351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95248973_95250692_95251054_95252479
ENSMUST00000020217.7	chr10	-	3210	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	92.7937902017156	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTATTTTTAGTTT	NA	False	NA	-21	True	AATAAA	-16	NA	95400008	95382868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
ENSMUST00000020223.8	chr10	+	2725	10	FSM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.1308895119123	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAATCTTTTCATTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	84412489	84450223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUST00000020227.11	chr10	-	3026	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_12	27.3651999200932	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	-5	True	ATTAAA	-19	NA	85020928	84967563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ENSMUST00000020234.14	chr10	+	4722	5	FSM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.15331193145904	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGCTGTCTCTTGCCTT	NA	False	NA	19	True	AGTAAA	-21	NA	86136235	86185370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_86136839_86174236_86174320_86179796_86179909_86180417_86180540_86181568
ENSMUST00000020238.14	chr10	-	2825	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	0	0	0	0	multi-exon	FALSE	canonical	3	2860	junction_11	342.987041630793	5078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541373	86526703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUST00000020249.2	chr10	-	2807	7	FSM	ENSMUSG00000020057.3	ENSMUST00000020249.2	2807	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.21335164821342	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGTCTCGGTTGCATT	NA	False	NA	NA	False	AATAAA	-18	NA	88192937	88158665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88160648_88161195_88161289_88164944_88165004_88172672_88172851_88176381_88176525_88180505_88180574_88192653
ENSMUST00000020251.10	chr10	+	5390	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_9	23.2735901828661	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGTTAGTATTTTT	NA	False	NA	22	True	CATAAA	-24	NA	88215087	88283191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ENSMUST00000020252.10	chr10	+	1139	9	FSM	ENSMUSG00000020059.10	ENSMUST00000020252.10	1139	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.47391296443837	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGGTTTCAGTATAT	NA	False	NA	3	True	AATAAA	-15	NA	88295430	88309097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537_88308643_88308766
ENSMUST00000020253.15	chr10	-	3231	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	0	667	0	-645	multi-exon	FALSE	canonical	3	100	junction_3	42.2794396889098	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCGATTCTGTAAGGTT	4124	False	NA	NA	False	AATAAA	-12	NA	88339832	88309345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ENSMUST00000020257.13	chr10	-	3905	9	FSM	ENSMUSG00000020063.17	ENSMUST00000020257.13	3905	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_8	29.4870204496826	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCATTGTTCATAGCA	NA	False	NA	0	True	ATTAAA	-26	NA	63174811	63154785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63172758_63172876_63174343
ENSMUST00000020258.10	chr10	+	3898	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_7	41.1321548993809	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCAGTAGTTTCTATG	NA	False	NA	13	True	AATAAA	-27	NA	63079689	63153653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUST00000020263.14	chr10	-	2213	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGTCCTAGAATAT	5781	False	NA	-15	True	AATAAA	-15	NA	62859673	62850442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUST00000020263.14-0	chr10	-	1449	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	0	764	0	0	multi-exon	FALSE	canonical	3	275	junction_6	80.8621750760186	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUST00000020268.7	chr10	-	4352	25	FSM	ENSMUSG00000020074.8	ENSMUST00000020268.7	4352	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	99.9008883844383	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628010	62579706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
ENSMUST00000020270.6	chr10	-	2535	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_9	23.4748019486984	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8106	False	NA	-11	True	ATTAAA	-28	NA	62486997	62451793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ENSMUST00000020271.13	chr10	-	938	3	FSM	ENSMUSG00000020077.15	ENSMUST00000020271.13	938	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTGGCTATGTGACATGG	NA	False	NA	-2	True	AATAAA	-21	NA	62343534	62330206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62330886_62333557_62333703_62343420
ENSMUST00000020273.16	chr10	-	2604	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	0	0	0	0	multi-exon	FALSE	canonical	2	205	junction_12	41.8359283147773	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTTGTAATTGCCTT	NA	False	NA	95	True	AATAGA	-18	NA	62285517	62264987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ENSMUST00000020277.9	chr10	-	3517	18	FSM	ENSMUSG00000020080.9	ENSMUST00000020277.9	3517	18	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	3.69231878270005	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGGTATTAAGCTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	62258270	62218915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62219702_62221456_62221691_62227089_62227246_62229465_62229650_62230933_62231034_62231176_62231273_62234363_62234484_62234568_62234709_62235970_62236276_62237502_62237737_62239270_62239427_62241203_62241388_62244393_62244494_62245568_62245665_62247285_62247406_62247484_62247634_62253553_62253717_62258076
ENSMUST00000020283.5	chr10	-	2175	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_7	26.0813031691286	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGCGTCTTTCTTATA	NA	False	NA	-26	True	NA	NA	NA	61619926	61574443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ENSMUST00000020284.5	chr10	+	2286	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	6.12825877028341	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTTGGCTGCTTTT	NA	False	NA	21	True	AATAAA	-24	NA	61531292	61538552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
ENSMUST00000020285.10	chr10	+	2613	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	0	0	0	0	multi-exon	FALSE	canonical	3	1130	junction_5	94.5492229241233	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516088	61529076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUST00000020286.7	chr10	+	1364	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	0	0	0	0	multi-exon	FALSE	canonical	3	3777	junction_3	128.102654148929	2455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2052	False	NA	15	True	AATAAA	-16	NA	61484330	61509947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUST00000020288.15	chr10	-	5784	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	2.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGTGGTTTGTGGTA	NA	False	NA	-1	True	AATAAA	-16	NA	61288440	61264269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_61269608_61270696_61270883_61288180
ENSMUST00000020288.15-0	chr10	-	2615	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	-132	3301	-132	1028	multi-exon	FALSE	canonical	3	200	junction_2	2.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAGTCTTGGGAAAACG	NA	False	NA	-21	True	ATTAAA	-18	NA	61288572	61267570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_61269608_61270696_61270883_61288180
ENSMUST00000020289.10	chr10	-	4282	20	FSM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_14	26.6759563689748	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219309	61155434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ENSMUST00000020298.8	chr10	+	789	4	FSM	ENSMUSG00000020098.8	ENSMUST00000020298.8	789	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGCTTCTAGAACCTTC	NA	False	NA	6	True	AATAAA	-17	NA	60925137	60930103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_60925196_60927842_60927975_60928382_60928464_60929585
ENSMUST00000020307.11	chr10	-	1379	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838933	59823729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ENSMUST00000020307.11-0	chr10	-	883	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	0	496	0	0	multi-exon	FALSE	canonical	3	55	junction_3	152.559004978402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGGGGATCAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	59838933	59824225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ENSMUST00000020308.5	chr10	-	1755	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	4.5	848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTCTCATCGGCGCCA	NA	False	NA	-4	True	AATAAA	-17	NA	59787656	59785490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59786852_59787138_59787395_59787518
ENSMUST00000020309.7	chr10	+	2238	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGCGCACCAAGGACTC	NA	False	NA	NA	False	NA	NA	NA	59715447	59734343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ENSMUST00000020309.7-0	chr10	+	3021	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	-8	-775	0	0	multi-exon	FALSE	canonical	3	36	junction_8	81.8458917722814	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGGTGGGTCTGCA	NA	False	NA	31	True	NA	NA	NA	59715439	59735118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ENSMUST00000020312.13	chr10	-	2872	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	16.9957977999605	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCATCTCGTTCTTTA	5630	False	NA	-1	True	AATAAA	-20	NA	59452514	59282805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
ENSMUST00000020315.13	chr10	-	7766	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATCCATGTTTTCCTTC	226	False	NA	-27	True	AATAAA	-24	NA	119075960	119035159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ENSMUST00000020315.13-0	chr10	-	4376	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	0	3390	0	-3390	multi-exon	FALSE	canonical	3	515	junction_9	90.891306470073	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGATTTCTTGGTT	226	False	NA	-29	True	ATTAAA	-15	NA	119075960	119038549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ENSMUST00000020316.4	chr10	-	3024	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	17.7	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTGCTTTTGTACC	3878	False	NA	0	True	AATAAA	-22	NA	121422692	121382359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ENSMUST00000020317.8	chr11	-	1544	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	0	0	0	0	multi-exon	FALSE	canonical	3	1392	junction_5	81.0276016072438	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	False	NA	48	True	AGTAAA	-19	NA	17161568	17153197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ENSMUST00000020322.12-1	chr10	-	5050	22	FSM	ENSMUSG00000020121.16	ENSMUST00000020322.12	7711	22	-517	3178	-510	1071	multi-exon	FALSE	canonical	3	19	junction_11	9.24570133614962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATGATAGATTT	NA	False	NA	NA	False	NA	NA	NA	121883730	121620073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121664633_121664668_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ENSMUST00000020334.9	chr10	-	4666	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	0	0	0	0	multi-exon	TRUE	canonical	3	255	junction_15	80.7788802843912	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	False	NA	-1	True	AATAAA	-16	NA	123032858	122947640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUST00000020334.9-0	chr10	-	3192	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	-18	1492	-5	0	multi-exon	FALSE	canonical	3	255	junction_15	80.7788802843912	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	2	True	AATAAA	-32	NA	123032876	122949132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUST00000020339.10	chr10	-	3752	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCATTTCTTTGGAGCGC	NA	False	NA	NA	False	ACTAAA	-3	NA	115087372	115033776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ENSMUST00000020339.10-0	chr10	-	3164	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	0	588	0	-588	multi-exon	FALSE	canonical	3	391	junction_16	42.5718143259129	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115087372	115034364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ENSMUST00000020341.9	chr10	-	1649	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGGCTCGCTTTATTA	8717	False	NA	NA	False	GATAAA	-19	NA	80156371	80154087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80155382_80156016
ENSMUST00000020341.9-0	chr10	-	1195	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	0	454	0	-454	multi-exon	FALSE	canonical	3	349	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTTCTCCCTTAAGCCA	8717	False	NA	-16	True	ATTAAA	-18	NA	80156371	80154541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80155382_80156016
ENSMUST00000020343.9	chr10	-	4602	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCCTCGCCCTAAACT	NA	False	NA	NA	False	AGTAAA	-16	NA	115151496	115122988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ENSMUST00000020343.9-0	chr10	-	1827	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	-3	2778	0	-2778	multi-exon	FALSE	canonical	3	420	junction_4	15.542057635833	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTTTTAGAATGGTTA	NA	False	NA	-10	True	ATTAAA	-18	NA	115151499	115125766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ENSMUST00000020358.12	chr11	+	2827	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	0	0	0	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151431	20176856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUST00000020358.12-0	chr11	+	1428	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	7	1392	0	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	NA	False	NA	16	True	AATAAA	-29	NA	20151438	20175464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUST00000020361.7	chr10	+	758	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	1255	junction_1	343.259525783067	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGTGTTCTGTGTGGA	9692	False	NA	23	True	AATAAA	-14	NA	80085285	80092626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUST00000020365.15	chr10	+	2640	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	105.419758317817	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATAGTCATTGCACA	8218	False	NA	19	True	TATAAA	-17	NA	80062267	80079737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUST00000020372.6	chr10	-	445	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	4161	junction_1	104.5	598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGGCTCCTTCCTCATC	NA	False	NA	-1	True	ATTAAA	-21	NA	80242664	80238830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80238990_80239969_80240121_80242529
ENSMUST00000020375.7	chr10	-	2690	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGGTTGGGTTATTTT	NA	False	NA	-5	True	ATTAAA	-16	NA	116786285	116741688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
ENSMUST00000020375.7-0	chr10	-	1697	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	0	993	0	0	multi-exon	FALSE	canonical	3	22	junction_7	97.8627156332334	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	False	NA	-7	True	AATAAA	-10	NA	116786285	116742681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
ENSMUST00000020377.13	chr10	-	2842	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020377.13	2842	19	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_12	305.080706788091	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269455	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUST00000020379.13	chr10	-	2829	19	FSM	ENSMUSG00000020167.15	ENSMUST00000020379.13	2829	19	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_5	199.277305392371	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCTCATGTCTGTT	NA	False	NA	29	True	NA	NA	NA	80269469	80245459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUST00000020381.5	chr10	-	6420	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTAAAGTTTTACTGTAT	NA	False	NA	-5	True	AATAAA	-28	NA	116984415	116905331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ENSMUST00000020381.5-1	chr10	-	5849	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	-24	595	0	-595	multi-exon	FALSE	canonical	3	66	junction_1	21.0226215606891	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGAGTGTGGCTTTGTGG	NA	False	NA	-1	True	AATAAA	-19	NA	116984439	116905926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ENSMUST00000020382.8	chr10	-	1327	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	39.2074256005444	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTGTCTGCCTCTTGTG	3371	False	NA	-14	True	AATAAA	-14	NA	117060412	117051126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ENSMUST00000020397.11	chr10	+	3036	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	0	0	0	0	multi-exon	FALSE	canonical	3	3512	junction_3	116.998575489904	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGATTATTCCAAGACT	1402	False	NA	NA	False	AATAAA	-17	NA	75353384	75373215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ENSMUST00000020397.11-0	chr10	+	610	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	463	1963	0	0	multi-exon	FALSE	canonical	3	3512	junction_3	116.998575489904	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTGATAAACTGTTAAG	1865	False	NA	-15	True	NA	NA	NA	75353847	75371252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ENSMUST00000020403.7	chr10	+	875	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	401	108	0	0	multi-exon	FALSE	canonical	3	157	junction_1	20.350921355064	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTTTCAGAGGAGCTG	NA	False	NA	31	True	AATAAA	-32	NA	110756050	110775375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ENSMUST00000020408.16	chr10	-	3099	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_11	63.7658423031336	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTCAGTGATTTTG	NA	False	NA	1	True	AATAAA	-41	NA	117546663	117524779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ENSMUST00000020420.9	chr10	-	4805	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	0	0	0	0	multi-exon	FALSE	canonical	1	82	junction_14	55.4957555934586	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9208	False	NA	-2	True	ATTAAA	-14	NA	80578098	80542789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ENSMUST00000020437.13	chr10	+	3074	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	15.3152281412244	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977736	118004902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ENSMUST00000020439.11	chr10	+	2294	10	FSM	ENSMUSG00000020218.12	ENSMUST00000020439.11	2294	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.2704627669473	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGGTCTTTGTAAGACT	NA	False	NA	NA	False	AATAAA	-27	NA	120869864	120936555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_120870396_120870870_120871011_120911150_120911260_120918030_120918172_120919792_120919889_120920813_120920910_120926015_120926112_120931903_120932000_120932545_120932642_120935662
ENSMUST00000020440.7	chr10	-	587	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	184	454	0	0	multi-exon	FALSE	canonical	3	3643	junction_2	39.5	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCACCTCACTGCTTCA	5632	False	NA	-7	True	AATAAA	-25	NA	80736619	80735737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80736094_80736315_80736385_80736457
ENSMUST00000020444.16	chr10	+	741	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	0	923	0	95	multi-exon	FALSE	canonical	3	990	junction_2	137	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120062974	120067564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_120063029_120063878_120064109_120067107
ENSMUST00000020446.11	chr10	+	904	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_6	43.3628104870214	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTCTTCTATAATT	NA	False	NA	31	True	ATTAAA	-43	NA	120044654	120060822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
ENSMUST00000020448.11	chr10	-	3097	12	FSM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	3.60440501847255	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTTTGTTAACTCAGAA	NA	False	NA	NA	False	ATTAAA	-17	NA	120037564	119977552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037231
ENSMUST00000020449.12	chr10	-	4554	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	7.32006375199925	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCAGTCTGTGGTTTTCT	NA	False	NA	-3	True	NA	NA	NA	119948892	119919512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ENSMUST00000020452.12	chr10	-	2016	11	FSM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	2.63818119165458	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATTTTGTTCTGTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	76073671	76043060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072656_76073583
ENSMUST00000020454.11	chr10	-	1621	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_7	50.249222630803	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	False	NA	-11	True	AATAAA	-17	NA	81186258	81181884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ENSMUST00000020461.15	chr10	-	3348	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_9	5.66557723732532	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCCATTA	3912	False	NA	NA	False	AAAAAG	-44	NA	81263007	81234971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ENSMUST00000020463.14	chr10	-	3118	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_4	53.9264236863306	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGACCAGAACCCTGCTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	81332226	81322082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUST00000020484.9	chr10	+	3325	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	0	0	0	0	multi-exon	FALSE	canonical	1	113	junction_1	208.745903123884	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695012	82733546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUST00000020488.9	chr10	+	3509	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	0	119670	0	-119670	multi-exon	FALSE	canonical	3	119	junction_1	5.24933858267454	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTATTTGGTGGCAC	NA	False	NA	17	True	TTTAAA	-6	NA	83196084	83204699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
ENSMUST00000020490.13	chr9	+	3747	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	24.1958157539687	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTGAGTTTCTGTA	NA	False	NA	54	True	NA	NA	NA	106048126	106068338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ENSMUST00000020493.9	chr10	+	2290	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	28.5938695352693	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAGTCCTAGAAATGGT	NA	False	NA	16	True	AATAAA	-17	NA	77095051	77105409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
ENSMUST00000020496.14	chr10	-	2910	11	FSM	ENSMUSG00000020262.16	ENSMUST00000020496.14	6549	11	-5	3644	0	-3642	multi-exon	FALSE	canonical	2	18	junction_4	10.2024506859872	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGGAATGAGATTTATAA	NA	False	NA	NA	False	AATAAA	-14	NA	77254104	77130203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
ENSMUST00000020497.14	chr10	-	6027	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTCTCCTTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	83370004	83323313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ENSMUST00000020497.14-0	chr10	-	3023	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	59	2945	0	-966	multi-exon	FALSE	canonical	3	47	junction_9	8.2773463628096	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTTAACCTCTTTTT	NA	False	NA	-20	True	AAGAAA	-23	NA	83369945	83326258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ENSMUST00000020499.14	chr11	+	1950	12	FSM	ENSMUSG00000020261.16	ENSMUST00000020499.14	1950	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	17.4895482366087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGCCCCAAGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	55095201	55124663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192_55123533_55124327
ENSMUST00000020500.14	chr10	-	3020	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	12.9324205004322	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484602	83435896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ENSMUST00000020501.15	chr10	+	2630	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	0	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCACAGAGTAAACATG	NA	False	NA	NA	False	NA	NA	NA	77441930	77454165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ENSMUST00000020501.15-0	chr10	+	1593	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	128	909	0	0	multi-exon	FALSE	canonical	3	1171	junction_3	110.14031454871	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	25	True	AGTAAA	-18	NA	77442058	77453256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ENSMUST00000020504.6	chr11	+	636	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	4351	junction_2	227.5	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTGTTACTCTGGAA	NA	False	NA	34	True	AATAAA	-23	NA	54757208	54761327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54757427_54760673_54760779_54761014
ENSMUST00000020513.10	chr11	-	3747	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	18.5612914946701	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCTTTAATTTTTT	1269	False	NA	-1	True	TTTAAA	-8	NA	23845253	23812645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ENSMUST00000020522.9	chr10	-	3730	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTCGCCAGACTGGCT	NA	False	NA	NA	False	NA	NA	NA	77845641	77822780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ENSMUST00000020522.9-0	chr10	-	2700	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	71	959	0	-959	multi-exon	FALSE	canonical	3	1016	junction_15	83.2280695716646	2172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGGTCACTGGGACAACA	NA	False	NA	-30	True	AATAAA	-15	NA	77845570	77823739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ENSMUST00000020523.4	chr11	-	1694	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	107	2345	0	632	multi-exon	FALSE	canonical	3	429	junction_1	13.1993265821489	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGTCCAGTGTTGAAT	NA	False	NA	-5	True	AATAAA	-27	NA	23615852	23598823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ENSMUST00000020524.15	chr11	-	2946	18	FSM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	19.5534933028863	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172300	32159584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ENSMUST00000020528.14	chr11	+	1737	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGCACGCGTGTGT	NA	False	NA	6	True	NA	NA	NA	32176510	32182700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ENSMUST00000020528.14-0	chr11	+	1040	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	19	678	0	0	multi-exon	FALSE	canonical	3	333	junction_1	11.8977121983832	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAAGTCTCAGCCAGAA	NA	False	NA	25	True	AATAAA	-22	NA	32176529	32182022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ENSMUST00000020529.13	chr11	-	1734	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	100	1189	0	-153	multi-exon	FALSE	canonical	3	225	junction_2	27.6394193137265	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	NA	False	NA	-4	True	AATAAA	-20	NA	23447930	23439735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUST00000020530.12	chr11	-	2865	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	0	0	0	0	multi-exon	TRUE	canonical	3	148	junction_6	11.6770786871831	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTTGCTGAGGCTGAT	4567	False	NA	NA	False	ATTAAA	-15	NA	32217707	32181962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ENSMUST00000020530.12-0	chr11	-	2081	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	78	706	0	266	multi-exon	FALSE	canonical	3	148	junction_6	11.6770786871831	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTGTGTATGTGTG	4645	False	NA	-3	True	AATATA	-15	NA	32217629	32182668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ENSMUST00000020537.9	chr11	+	2239	5	FSM	ENSMUSG00000020297.11	ENSMUST00000020537.9	2239	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	2.06155281280883	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGACTGTCTGTCCAT	NA	False	NA	21	True	AATAAA	-17	NA	31950462	32009202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_31950597_31951730_31951881_31967650_31967735_32005012_32005124_32007442
ENSMUST00000020538.13	chr11	+	5145	26	FSM	ENSMUSG00000020290.15	ENSMUST00000020538.13	5145	26	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	458.823200808329	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCACTGTGGGGTTTAG	NA	False	NA	NA	False	NA	NA	NA	23206040	23247597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_23206168_23206411_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUST00000020538.13-0	chr11	+	3781	26	FSM	ENSMUSG00000020290.15	ENSMUST00000020538.13	5145	26	0	1364	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	458.823200808329	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTGTTTTTTGTAT	NA	False	NA	12	True	ATTAAA	-21	NA	23206040	23246233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_23206168_23206411_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUST00000020546.3	chr11	-	3348	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	0	592	0	87	multi-exon	FALSE	canonical	3	131	junction_2	14.613540144522	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCATGGCTCCTTGTGT	NA	False	NA	-26	True	AGTAAA	-15	NA	31320074	31307898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ENSMUST00000020550.13	chr10	+	1266	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_4	163.290194133022	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79518028	79524232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ENSMUST00000020551.13	chr11	+	3228	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTATTATTGTGGTTT	NA	False	NA	NA	False	TATAAA	-14	NA	30904394	31052704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUST00000020551.13-0	chr11	+	1976	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	24	1228	0	143	multi-exon	FALSE	canonical	3	71	junction_7	7.49979423586054	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGATGTGACTTCTTTC	NA	False	NA	18	True	AATAAA	-18	NA	30904418	31051476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUST00000020553.5	chr11	-	1018	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTGTACTTTTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	30936334	30926951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_30927747_30936111
ENSMUST00000020554.8	chr10	+	1436	5	FSM	ENSMUSG00000020310.10	ENSMUST00000020554.8	1436	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	3.08220700148449	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGGCATATTCTTTCG	3155	False	NA	NA	False	AATAAA	-14	NA	79500392	79504371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79500502_79500745_79501013_79501264_79501592_79502172_79502605_79504070
ENSMUST00000020562.5	chr11	+	1634	13	FSM	ENSMUSG00000007739.11	ENSMUST00000020562.5	1634	13	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	1486.11417938416	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGATAAAAGGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	22940649	22953151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_22940881_22943266_22943320_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ENSMUST00000020564.7	chr10	-	3243	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3.42681419915868	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTTCTGGTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	79473752	79454485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ENSMUST00000020568.10	chr11	+	2792	18	FSM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.74350648863466	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTTCTTCTCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	21522234	21848989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
ENSMUST00000020575.5	chr10	+	1955	5	FSM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.6809513236909	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTATTTTCTGCCTCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	79613105	79618464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79613232_79614396_79614583_79615798_79616015_79616957_79617186_79617265
ENSMUST00000020576.8	chr11	-	3512	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	51.9422756528822	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646138	40639378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ENSMUST00000020578.11	chr11	+	1577	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_2	37.9326889224701	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624493	40630873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ENSMUST00000020579.9	chr11	-	3892	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	0	0	0	0	multi-exon	TRUE	canonical	3	534	junction_10	59.4855104336938	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624249	40592221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ENSMUST00000020580.13	chr10	-	3755	21	FSM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_16	17.3118456555042	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	4709	False	NA	-7	True	NA	NA	NA	79582413	79571963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ENSMUST00000020608.3	chr11	+	1920	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	143	5039	143	3047	multi-exon	TRUE	canonical	3	1809	junction_6	129.264586539908	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGGCAACTCCTTGG	NA	False	NA	24	True	AATAAA	-20	NA	51989650	52013566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ENSMUST00000020624.7	chr11	-	2498	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	49603537	49565539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ENSMUST00000020624.7-0	chr11	-	3721	12	FSM	ENSMUSG00000020362.14	ENSMUST00000020624.7	2498	12	-13	-1210	0	1195	multi-exon	FALSE	canonical	3	150	junction_7	24.0849049121664	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGAATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	49603550	49564329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576089_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ENSMUST00000020629.5	chr11	+	2947	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	0	0	0	0	multi-exon	FALSE	canonical	2	320	junction_10	53.5808204583287	868	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCGACTTGTTTGAATT	NA	False	NA	27	True	AATAAA	-17	NA	49685013	49729440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ENSMUST00000020630.8	chr11	-	4618	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	0	0	0	0	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTTAATTTTCTTA	NA	False	NA	-1	True	AATAAA	-22	NA	53191284	53150640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ENSMUST00000020630.8-0	chr11	-	2858	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	0	1760	0	1306	multi-exon	FALSE	canonical	3	1487	junction_13	205.703280251368	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGTTGTCAACTTTG	NA	False	NA	-44	True	ATTAAA	-16	NA	53191284	53152400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ENSMUST00000020634.14	chr11	+	4675	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTACTTGTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	49737579	49777248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ENSMUST00000020634.14-0	chr11	+	2120	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	18	2537	0	574	multi-exon	FALSE	canonical	3	274	junction_7	40.7615521322656	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAAATTTGTGATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	49737597	49774711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ENSMUST00000020637.9	chr11	-	3779	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	0	0	0	0	multi-exon	FALSE	canonical	3	3893	junction_7	208.647160908319	4370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8136	False	NA	-54	True	AATAAA	-22	NA	50216500	50185293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ENSMUST00000020640.8	chr11	+	1447	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	0	0	0	0	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCCACCTTTCCCCAAG	NA	False	NA	NA	False	AATAAA	-23	NA	48691186	48697261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUST00000020640.8-0	chr11	+	1134	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	-28	341	0	0	multi-exon	FALSE	canonical	1	1907	junction_2	1651.73542626153	2671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATATGTGAGTCCTGGA	NA	False	NA	28	True	AATAAA	-20	NA	48691158	48696920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUST00000020643.4	chr11	-	2688	18	FSM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	7.873128931343	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGCCTCCAGCTTGCT	4149	False	NA	0	True	AATAAA	-32	NA	50321952	50280112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
ENSMUST00000020647.10	chr11	+	1142	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	8.63616427202108	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCTTGCTGCTACACTC	NA	False	NA	7	True	AATAAA	-17	NA	50065675	50090942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ENSMUST00000020649.14	chr11	-	5153	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	0	0	0	0	multi-exon	FALSE	canonical	2	205	junction_2	31.5695880379977	563	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCATGGATGTGGGT	NA	False	NA	1	True	NA	NA	NA	53598146	53540345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ENSMUST00000020653.6	chr11	+	1201	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_5	46.9006041183551	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	3565	False	NA	12	True	AATAAA	-18	NA	51654513	51682752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ENSMUST00000020655.14	chr11	-	6273	12	FSM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	3.21926021993196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCATGACGTTCTGT	8348	False	NA	-11	True	AATAAA	-17	NA	51748480	51704281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748137
ENSMUST00000020655.14-0	chr11	-	2710	12	FSM	ENSMUSG00000020387.16	ENSMUST00000020655.14	6273	12	257	3306	0	-3301	multi-exon	FALSE	canonical	2	9	junction_11	3.21926021993196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTGTCTTTCCTCTGT	8605	False	NA	0	True	AATATA	-20	NA	51748223	51707587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748137
ENSMUST00000020657.13	chr11	-	1792	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCAGCCTCCTAGAGA	NA	False	NA	58	True	NA	NA	NA	51891311	51876323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ENSMUST00000020657.13-0	chr11	-	1024	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	5	763	0	407	multi-exon	FALSE	canonical	3	559	junction_4	76.342910607338	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACTTTGTCACTTATT	NA	False	NA	-3	True	AATACA	-13	NA	51891306	51877086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ENSMUST00000020665.13	chr11	+	1193	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	179.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATTGTCATTCTTGGA	NA	False	NA	12	True	AATAAA	-14	NA	46327778	46332354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_46327837_46330632_46330803_46331389
ENSMUST00000020673.3	chr11	+	891	8	FSM	ENSMUSG00000020402.12	ENSMUST00000020673.3	891	8	0	0	0	0	multi-exon	FALSE	canonical	3	3141	junction_5	166.267181097786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATATTGTACAATCGTT	3539	False	NA	NA	False	NA	NA	NA	52265089	52279350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ENSMUST00000020677.8	chr11	+	1277	9	FSM	ENSMUSG00000020407.14	ENSMUST00000020677.8	1277	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	932.389931506663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGTGTGACTCTGC	NA	False	NA	20	True	AATAAA	-14	NA	9068102	9086164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_9068285_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUST00000020681.10	chr11	+	3625	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGAGTTGTTTGAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	43324585	43338808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ENSMUST00000020681.10-0	chr11	+	2694	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	-15	946	0	-946	multi-exon	FALSE	canonical	3	184	junction_1	28.1705914425349	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	14	True	AATAAA	-25	NA	43324570	43337862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ENSMUST00000020683.10	chr11	-	4640	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	37.6557988054094	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8961191	8943136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
ENSMUST00000020687.15	chr11	-	741	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	2427	junction_5	2882.94754721622	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACCCCTGATTGGTAT	NA	False	NA	-12	True	AATAAA	-34	NA	43317078	43311076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
ENSMUST00000020692.7	chr1	-	2743	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCTCCTTGGGAGGCG	NA	False	NA	NA	False	TATAAA	-39	NA	134006858	134002907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_134005442_134006649
ENSMUST00000020695.13	chr11	-	7483	31	FSM	ENSMUSG00000020422.15	ENSMUST00000020695.13	7483	31	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_30	11.9341247409826	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	9661	False	NA	NA	False	AATAAA	-24	NA	8614535	8381651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ENSMUST00000020699.4	chr11	+	1574	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	11.4229757506527	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	7118	False	NA	17	True	AATAAA	-25	NA	4168224	4172409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ENSMUST00000020702.11	chr11	-	2421	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	11.7340317027013	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTTGTCTGTTTCTGG	NA	False	NA	NA	False	AATAAA	-23	NA	7163897	7156085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
ENSMUST00000020705.5	chr11	+	2911	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGCTGCCCATTATTG	NA	False	NA	NA	False	NA	NA	NA	3913974	3930004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUST00000020705.5-0	chr11	+	2086	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	34	791	0	-791	multi-exon	FALSE	canonical	3	864	junction_12	97.3847042006336	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAATTGGATTCTGTG	NA	False	NA	17	True	NA	NA	NA	3914008	3929213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUST00000020706.5	chr11	+	6693	20	FSM	ENSMUSG00000020431.6	ENSMUST00000020706.5	12259	20	-61	5627	-61	0	multi-exon	FALSE	canonical	3	12	junction_6	3.58667895524228	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTATATTGCCTTATTT	NA	False	NA	9	True	GATAAA	-28	NA	7013427	7122879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_7014236_7028887_7029038_7050569_7050689_7059000_7059113_7080275_7080404_7087272_7087432_7088286_7088429_7089033_7089190_7094677_7094873_7095040_7095139_7096508_7096594_7099501_7099592_7099961_7100216_7100776_7100904_7110205_7110323_7111278_7111426_7111851_7111951_7115411_7115527_7117063_7117189_7119412
ENSMUST00000020707.12	chr11	-	3673	10	FSM	ENSMUSG00000010803.14	ENSMUST00000020707.12	4688	10	470	545	0	-545	multi-exon	FALSE	canonical	1	1	junction_3	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGTGTTGCCGTTTATC	NA	False	NA	NA	False	AATAAA	-18	NA	42073287	42022310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42072992
ENSMUST00000020710.11	chr11	-	1897	10	FSM	ENSMUSG00000020432.13	ENSMUST00000020710.11	1897	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	45.2714719535328	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3881995	3867191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3881975
ENSMUST00000020717.12	chr6	+	1116	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	0	0	0	0	multi-exon	TRUE	canonical	3	1725	junction_4	143.712769091685	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	-31	True	NA	17	True	AATAAA	-17	NA	28423558	28426601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUST00000020719.7	chr11	+	1285	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	17.464249196573	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTATATTATCTCGCT	NA	False	NA	7	True	AGTAAA	-15	NA	59099146	59101564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
ENSMUST00000020721.15	chr11	-	3335	21	FSM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_20	9.90908673894825	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8137	False	NA	-6	True	GATAAA	-17	NA	3489292	3467522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ENSMUST00000020734.11	chr11	+	3565	18	FSM	ENSMUSG00000020454.18	ENSMUST00000020734.11	3565	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	69.1571601699214	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	3573	False	NA	7	True	ATTAAA	-23	NA	3152391	3194581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUST00000020741.12	chr11	-	1546	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_5	106.427719016241	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	False	NA	-1	True	TATAAA	-34	NA	3216393	3199906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUST00000020749.13	chr11	+	2425	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	55.902387454177	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAATGGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	29476447	29495279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUST00000020754.10	chr11	-	1664	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGTTTTCTCTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	29197409	29171531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
ENSMUST00000020754.10-0	chr11	-	1250	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	121	293	0	-293	multi-exon	FALSE	canonical	3	210	junction_4	19.5037191768236	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGACTGTTAGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	29197288	29171824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
ENSMUST00000020755.12	chr11	+	5125	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_14	38.0796825383593	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122889	29170797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ENSMUST00000020756.9	chr11	+	2707	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	125.489275633577	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGCTTGCCTACTATT	NA	False	NA	NA	False	NA	NA	NA	29080747	29111828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUST00000020768.4	chr11	-	840	3	FSM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	6	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCACGTTTCATATAGCT	8648	False	NA	NA	False	AATAAA	-15	NA	5753733	5751639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5751840_5752998_5753180_5753274
ENSMUST00000020769.14	chr11	+	1638	13	FSM	ENSMUSG00000020476.15	ENSMUST00000020769.14	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	109.921057531707	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACAGCAGCACTGAGACG	NA	False	NA	NA	False	NA	NA	NA	5738521	5750288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747274_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUST00000020770.11	chr11	-	700	3	FSM	ENSMUSG00000020477.11	ENSMUST00000020770.11	700	3	0	0	0	0	multi-exon	FALSE	canonical	3	2385	junction_2	231.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGGGTCTCTCTCTC	NA	False	NA	-25	True	AATAAA	-18	NA	5657667	5654325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5654733_5657297_5657410_5657486
ENSMUST00000020775.9	chr11	-	2476	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGGGGTTTCTTTGGG	NA	False	NA	0	True	ATTAAA	-22	NA	87878359	87870350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_87872397_87874697_87874837_87878068
ENSMUST00000020775.9-0	chr11	-	738	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	0	1738	0	-1108	multi-exon	FALSE	canonical	3	615	junction_2	8	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	-24	True	AGTAAA	-16	NA	87878359	87872088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_87872397_87874697_87874837_87878068
ENSMUST00000020776.5	chr11	-	3372	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	36.1939221417077	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTGTAATCCTGTATAA	NA	False	NA	-2	True	AATAAA	-24	NA	5492187	5478886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
ENSMUST00000020794.6	chr11	+	3037	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	6.12825877028341	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGCCTCCATGTTATATT	NA	False	NA	13	True	AATAAA	-21	NA	87000059	87015461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ENSMUST00000020801.14	chr11	-	3218	4	FSM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	5.65685424949238	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTATCTGTTTTGTC	NA	False	NA	1	True	AATAAA	-35	NA	86977600	86968557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86968977_86970991_86971865_86974425_86974572_86975820
ENSMUST00000020804.8	chr11	-	2336	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	8.73053390247253	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGATTCCAGTGTGT	NA	False	NA	-8	True	AATAAA	-39	NA	86964888	86924692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
ENSMUST00000020820.2	chr11	+	722	7	FSM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	0	0	0	0	multi-exon	TRUE	canonical	3	1080	junction_1	114.661821603066	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTTCATTGAATTATT	1481	False	NA	12	True	AGTAAA	-15	NA	58062486	58070391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ENSMUST00000020822.12	chr11	+	2035	7	FSM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_3	50.6603614497787	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57994978	58009420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ENSMUST00000020826.6	chr11	+	1151	4	FSM	ENSMUSG00000020519.6	ENSMUST00000020826.6	1151	4	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_2	12.1197726417986	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCGGTCAGGAGGATTA	NA	False	NA	24	True	AATAAA	-24	NA	57692462	57701043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57693116_57696869_57696993_57698849_57698949_57700767
ENSMUST00000020827.7	chr11	+	4452	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	0	0	0	0	multi-exon	TRUE	canonical	3	265	junction_2	21.9146070008111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTAATTTCTATTT	NA	False	NA	NA	False	AATAAA	-30	NA	86375482	86389851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUST00000020827.7-0	chr11	+	1950	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	28	2474	0	-2474	multi-exon	FALSE	canonical	3	265	junction_2	21.9146070008111	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGACCTGTTATGTACTC	NA	False	NA	10	True	AATAAA	-21	NA	86375510	86387377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUST00000020830.14	chr11	+	4839	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	12.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTGAATGATGTATATT	NA	False	NA	18	True	AATAAA	-19	NA	57409512	57424640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57409575_57418684_57419116_57420294
ENSMUST00000020831.13	chr11	-	2557	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_13	118.75144346678	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409443	57373818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ENSMUST00000020835.16	chr11	+	2899	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTGGCGTTTTGTTGG	7706	False	NA	3	True	AATAAA	-13	NA	85202069	85237892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ENSMUST00000020835.16-0	chr11	+	2133	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	0	766	0	-766	multi-exon	FALSE	canonical	3	65	junction_1	8.90842298052804	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGGAATTTAACAGTT	7706	False	NA	16	True	AATAAA	-16	NA	85202069	85237126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ENSMUST00000020843.13	chr11	+	9026	54	FSM	ENSMUSG00000020532.19	ENSMUST00000020843.13	9026	54	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_49	40.9586007765413	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCCACCGTTTGTCA	NA	False	NA	6	True	AATAAA	-14	NA	84086263	84292471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ENSMUST00000020846.8	chr11	-	4299	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACACAATCTTCAGTGT	3801	False	NA	NA	False	AATAAA	-21	NA	60111430	60089914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ENSMUST00000020846.8-0	chr11	-	3791	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	0	508	0	-508	multi-exon	FALSE	canonical	3	238	junction_18	63.0911793643156	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3801	False	NA	-4	True	ATTAAA	-19	NA	60111430	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ENSMUST00000020849.9	chr11	-	4308	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTCCCTGTTGGTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	90578433	90534290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ENSMUST00000020849.9-0	chr11	-	2054	16	FSM	ENSMUSG00000020541.13	ENSMUST00000020849.9	4308	16	28	2226	0	0	multi-exon	FALSE	canonical	3	215	junction_9	19.1849478034792	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTTGTTGTTTTGTC	NA	False	NA	-2	True	ATTAAA	-17	NA	90578405	90536516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ENSMUST00000020851.15	chr11	+	1224	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	41.2876091178294	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGGCCTGACAACTTGA	NA	False	NA	10	True	NA	NA	NA	90528998	90535757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ENSMUST00000020856.6	chr12	-	1871	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_9	81.950499068161	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	36206824	36141833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ENSMUST00000020864.9	chr11	-	1960	6	FSM	ENSMUSG00000020553.9	ENSMUST00000020864.9	2723	6	0	763	0	-763	multi-exon	FALSE	canonical	3	31	junction_1	5.78273291792038	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTGTGTGCTGTCTC	NA	False	NA	-12	True	AATAAA	-14	NA	89893720	89874253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
ENSMUST00000020877.9	chr12	+	4325	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTGTACAGCGACAT	NA	False	NA	NA	False	AATAAA	-37	NA	33479633	33491391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ENSMUST00000020877.9-0	chr12	+	2317	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	0	2008	0	1669	multi-exon	FALSE	canonical	3	454	junction_3	49.8687165354081	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAAGAATACC	NA	False	NA	NA	False	ATTAAA	-7	NA	33479633	33489383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ENSMUST00000020878.8	chr12	+	462	4	FSM	ENSMUSG00000020562.8	ENSMUST00000020878.8	673	4	211	0	211	0	multi-exon	FALSE	canonical	3	39	junction_3	13.0213499897497	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATGTGTCTGGTTTCA	NA	False	NA	4	True	AATAAA	-14	NA	33445063	33451266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_33445198_33448277_33448443_33448546_33448635_33451191
ENSMUST00000020885.13	chr12	+	2019	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	20.9806458432528	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGAATGCCCCGTT	8425	False	NA	NA	False	AATAAA	-7	NA	33004182	33026903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ENSMUST00000020886.9	chr12	+	4527	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTTAGTGAAATGTTA	NA	False	NA	-7	True	AATAAA	-18	NA	32870333	32903348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUST00000020886.9-1	chr12	+	2786	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	0	1741	0	-1741	multi-exon	FALSE	canonical	3	823	junction_5	70.9532240282286	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	NA	False	NA	14	True	ATTAAA	-18	NA	32870333	32901607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUST00000020896.17	chr12	-	1932	6	FSM	ENSMUSG00000020577.18	ENSMUST00000020896.17	1932	6	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_3	64.3913037606787	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGGTGTTTAAATCAA	NA	False	NA	-4	True	AATAAA	-20	NA	36092488	36064555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_36065772_36070488_36070603_36071799_36071914_36072751_36072833_36073903_36074072_36092249
ENSMUST00000020899.5	chr12	+	3014	8	FSM	ENSMUSG00000020583.5	ENSMUST00000020899.5	3014	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.68534797531291	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTTTAAAAACTTTATT	NA	False	NA	NA	False	NA	NA	NA	8997928	9022028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8998252_9001997_9002565_9005366_9005493_9008789_9008916_9011117_9011244_9013472_9013599_9017628_9017740_9020519
ENSMUST00000020904.8	chr12	+	7644	33	FSM	ENSMUSG00000020580.11	ENSMUST00000020904.8	7644	33	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_11	41.2749805988749	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTGAAATAGTTGT	2035	False	NA	19	True	AATAAA	-26	NA	16944895	17037824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17005670_17005683_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ENSMUST00000020908.9	chr12	+	2418	7	FSM	ENSMUSG00000057469.9	ENSMUST00000020908.9	2418	7	0	0	0	0	multi-exon	FALSE	canonical	2	127	junction_1	56.1505911713215	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7410	False	NA	4	True	ATTAAA	-15	NA	16860977	16876753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ENSMUST00000020909.4	chr12	+	1773	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCATGTTTATGCTA	NA	False	NA	38	True	AATAAA	-29	NA	8971663	8988742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUST00000020909.4-0	chr12	+	1369	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	404	0	404	0	multi-exon	FALSE	canonical	3	924	junction_4	59.5158708991886	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTCATGTTTATGCTA	NA	False	NA	38	True	AATAAA	-29	NA	8972067	8988742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUST00000020911.14	chr12	+	3157	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTGTACTTGTGCAG	NA	False	NA	NA	False	AATAAA	-28	NA	8821322	8843715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
ENSMUST00000020911.14-0	chr12	+	2504	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	0	653	0	0	multi-exon	FALSE	canonical	3	214	junction_4	19.0574788468989	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCTATGAACTCTACTG	NA	False	NA	5	True	AATAAA	-14	NA	8821322	8843062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
ENSMUST00000020922.8	chr12	-	4198	3	FSM	ENSMUSG00000020601.9	ENSMUST00000020922.8	4198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGGGGCCTCAAAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	15866786	15841727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_15844078_15859696_15859990_15865231
ENSMUST00000020927.10	chr12	+	2959	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	12.8765506078125	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTGTTGTTCTTTTCC	NA	False	NA	NA	False	AGTAAA	-24	NA	8363431	8393824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUST00000020928.13	chr11	+	3273	14	FSM	ENSMUSG00000020604.14	ENSMUST00000020928.13	3273	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.73049836143059	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGCATTGCCATGATT	415	False	NA	NA	False	AATAAA	-15	NA	109364199	109464151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_109364248_109376301_109376400_109376531_109376584_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
ENSMUST00000020930.14	chr11	+	6160	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	46.1976430375211	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTAGCACGACGTTATT	NA	False	NA	12	True	AATAAA	-14	NA	109253656	109292195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ENSMUST00000020931.6	chr12	+	5603	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	0	0	0	0	multi-exon	TRUE	canonical	3	574	junction_19	50.8148542090207	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	4317	False	NA	NA	False	AATAAA	-23	NA	11315886	11369786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUST00000020931.6-0	chr12	+	3846	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	219	1538	0	204	multi-exon	FALSE	canonical	3	574	junction_19	50.8148542090207	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4536	False	NA	15	True	AATAAA	-16	NA	11316105	11368248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUST00000020947.7	chr12	+	1480	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTGCATTTCTTTAA	NA	False	NA	11	True	AATAAA	-17	NA	10440771	10445562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_10441227_10444537
ENSMUST00000020949.12	chr11	+	2068	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	8.31308835611224	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGCATAGTATTAGTG	NA	False	NA	14	True	AGTAAA	-24	NA	110289947	110404467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ENSMUST00000020954.15	chr12	-	3377	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGAGGAGACATGAG	8249	False	NA	-30	True	AATAAA	-19	NA	28800452	28740627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ENSMUST00000020954.15-0	chr12	-	2918	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	76	383	0	-383	multi-exon	FALSE	canonical	3	61	junction_11	21.61993264567	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTTCATTGTCTTCCT	8325	False	NA	-4	True	NA	NA	NA	28800376	28741010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ENSMUST00000020957.13	chr12	+	1652	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	13.6950923894494	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCTCTCGAGAGTTCT	NA	False	NA	15	True	NA	NA	NA	28725229	28732174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
ENSMUST00000020959.9	chr12	+	1455	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_3	35.1318217284442	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28699600	28709588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ENSMUST00000020962.12	chr12	-	2696	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	0	0	0	0	multi-exon	FALSE	canonical	3	1036	junction_3	130.609362434534	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGTGGTTGTACATG	NA	False	NA	-6	True	GATAAA	-13	NA	4957705	4929031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ENSMUST00000020964.7	chr12	-	976	4	FSM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	6.34209919681348	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTGTGGGAGGTTCTT	NA	False	NA	0	True	AATAAA	-29	NA	4891591	4883173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4883796_4884738_4884852_4888168_4888217_4891398
ENSMUST00000020969.5	chr12	+	3200	5	FSM	ENSMUSG00000020638.9	ENSMUST00000020969.5	3200	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	0.433012701892219	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTCGTCATCATTGCT	NA	False	NA	NA	False	AATAAA	-20	NA	26519202	26529836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_26520026_26521404_26521520_26523994_26524197_26527004_26527239_26528010
ENSMUST00000020974.7	chr12	-	1270	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCGGGATTCTGAATGG	NA	False	NA	NA	False	AATAAA	-15	NA	25146091	25143799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_25144576_25145309_25145374_25145661
ENSMUST00000020977.4	chr12	-	1773	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_6	14.7016627933336	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTATGACTCGCCTGTA	9060	False	NA	-5	True	AATAAA	-17	NA	31704825	31690048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
ENSMUST00000020979.9	chr12	-	1949	7	FSM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	46.7618077780005	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATAATTGGAGTTTT	NA	False	NA	NA	False	TATAAA	-10	NA	31684598	31645359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261
ENSMUST00000020980.12	chr12	+	2193	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	0	0	0	0	multi-exon	FALSE	canonical	3	5416	junction_9	442.930588436653	7495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTTGGGTAAAATGTAC	NA	False	NA	72	True	ATTAAA	-26	NA	24758239	24764145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUST00000020981.12	chr12	-	2037	6	FSM	ENSMUSG00000020652.18	ENSMUST00000020981.12	2037	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	34.9708449997995	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4283965	4263481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4283530_4283658_4283751
ENSMUST00000020982.7	chr12	+	4086	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	19.258475767539	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGTGTTATATAACTGT	NA	False	NA	18	True	TATAAA	-29	NA	24701272	24712788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
ENSMUST00000020984.9	chr12	+	4348	21	FSM	ENSMUSG00000020654.16	ENSMUST00000020984.9	4348	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_14	11.273863579093	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACTGTTGTGGCAATT	NA	False	NA	7	True	ATTAAA	-17	NA	4184152	4263524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258576_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ENSMUST00000020986.15	chr12	+	4698	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	5.84284938098603	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTCTGCTGGCTGCAT	NA	False	NA	8	True	AGTAAA	-14	NA	4132582	4160606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
ENSMUST00000020991.15	chr12	+	9685	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTTGTATTTTTTTCC	626	False	NA	6	True	NA	NA	NA	3857029	3964443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUST00000020991.15-0	chr12	+	4215	23	FSM	ENSMUSG00000020661.16	ENSMUST00000020991.15	9685	23	0	5470	0	426	multi-exon	FALSE	canonical	2	37	junction_5	34.649842283161	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAACATACAAAA	626	False	NA	-15	True	NA	NA	NA	3857029	3958973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3857121_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUST00000020997.15	chr12	+	1750	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	6.36153564813317	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTGTGTTCACTCAAT	8039	False	NA	16	True	AATAAA	-24	NA	30961666	31010161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
ENSMUST00000020999.7	chr12	+	6791	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTTGCCTGCTTCTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	3415189	3456494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ENSMUST00000020999.7-0	chr12	+	4421	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	-58	2428	0	2	multi-exon	FALSE	canonical	3	31	junction_2	14.4066311262614	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTGACCTTTATTTT	NA	False	NA	6	True	AGTAAA	-21	NA	3415131	3454066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ENSMUST00000021001.10	chr12	-	3513	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	0	0	0	0	multi-exon	FALSE	canonical	3	1286	junction_2	62.4422933595492	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTTTGGTTTTCAT	NA	False	NA	-2	True	TATAAA	-19	NA	3359969	3297427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUST00000021018.11	chr11	+	2068	16	FSM	ENSMUSG00000020680.16	ENSMUST00000021018.11	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	25.2651714597168	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGCATTATTTGTC	8660	False	NA	41	True	AATAAA	-21	NA	83363917	83397569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83364033_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395931_83397243
ENSMUST00000021030.8	chr11	+	1867	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	0	0	0	0	multi-exon	TRUE	canonical	3	226	junction_6	21.0698243941424	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105017250	105031220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ENSMUST00000021036.13	chr11	-	1719	6	FSM	ENSMUSG00000020696.19	ENSMUST00000021036.13	1719	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.6171149180149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGTTAATGTATC	NA	False	NA	-8	True	TTTAAA	-18	NA	82719857	82696432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82719555
ENSMUST00000021046.6	chr11	+	4011	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	0	0	0	0	multi-exon	FALSE	canonical	2	294	junction_3	62.7187383355908	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107751	106139965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUST00000021048.7	chr11	-	3144	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_7	76.5847732907789	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTCTGATAGTTTA	NA	False	NA	-14	True	AATAAA	-13	NA	106146905	106139967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ENSMUST00000021049.9	chr11	+	1316	11	FSM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	0	0	0	0	multi-exon	FALSE	canonical	3	2261	junction_6	178.766439803449	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	4536	False	NA	15	True	AATAAA	-19	NA	106146979	106153946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ENSMUST00000021052.16	chr11	-	2747	13	FSM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_5	34.2842488939487	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGACCTGGTCATTGA	NA	False	NA	-7	True	AATAAA	-20	NA	106163798	106154004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ENSMUST00000021060.6	chr11	-	1506	8	FSM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	14.9652659072089	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGGACTTTTGTA	4319	False	NA	NA	False	AATAAA	-33	NA	106670341	106659078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
ENSMUST00000021062.12	chr11	-	3559	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	0	0	0	0	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTTCATTTATTTATTC	9616	False	NA	-8	True	AATAAA	-18	NA	106679358	106671180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUST00000021062.12-0	chr11	-	2328	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	38	1193	0	0	multi-exon	FALSE	canonical	3	3830	junction_8	158.443711526277	3157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUST00000021063.13	chr11	+	1904	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	0	0	0	0	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGCGTGGAGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	107370309	107388999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUST00000021063.13-0	chr11	+	1524	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	0	380	0	60	multi-exon	FALSE	canonical	3	2673	junction_3	110.503800839609	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTATATGTTGTTTT	NA	False	NA	14	True	ATTAAA	-17	NA	107370309	107388619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUST00000021066.4	chr11	-	3500	4	FSM	ENSMUSG00000020723.4	ENSMUST00000021066.4	3500	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTTGATGTGGGGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	107685383	107623182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107626145_107627552_107627694_107632746_107632831_107685070
ENSMUST00000021077.4	chr11	+	1925	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	12.6964561984831	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCTGTGTCCTCCTTT	NA	False	NA	10	True	NA	NA	NA	115054166	115072007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ENSMUST00000021078.3	chr11	-	1948	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	15.1766458254911	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	0	True	AATAAA	-17	NA	115167876	115158849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
ENSMUST00000021083.7	chr11	-	1375	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_2	125.475844288851	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGTGTTTTGTCTTTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	115405213	115388178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
ENSMUST00000021084.10	chr11	-	1000	4	FSM	ENSMUSG00000020738.17	ENSMUST00000021084.10	1000	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1872.39424860851	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115427055	115413927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115414596_115421171_115421244_115425381_115425510_115426923
ENSMUST00000021085.11	chr11	+	2230	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_16	81.0315439264927	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGATGGATGTTTCCAC	NA	False	NA	91	True	AATGAA	-12	NA	115455259	115474811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ENSMUST00000021087.14	chr11	-	1372	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	38.1030182531515	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503795	115498743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUST00000021089.11	chr11	-	2307	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGACTGCAGACCATT	NA	False	NA	-13	True	AATAAA	-17	NA	115518971	115505003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ENSMUST00000021089.11-0	chr11	-	1503	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	0	804	0	212	multi-exon	FALSE	canonical	3	102	junction_6	21.3053201493586	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTGTCACTCCTATA	NA	False	NA	-11	True	ATTAAA	-13	NA	115518971	115505807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ENSMUST00000021090.14	chr11	-	2709	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_5	53.4714877294432	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTTCATTTCTCC	4470	False	NA	-1	True	AATAAA	-19	NA	115599423	115534870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
ENSMUST00000021091.15	chr11	-	5803	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGGTGGGGTTTTTTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	74615496	74564774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ENSMUST00000021091.15-1	chr11	-	4383	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	335	1085	0	-1084	multi-exon	FALSE	canonical	3	936	junction_5	79.0964600977819	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCGGATGGTTGTTGATT	NA	False	NA	-8	True	AATAAA	-18	NA	74615161	74565859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ENSMUST00000021097.10	chr11	-	3971	19	FSM	ENSMUSG00000020752.12	ENSMUST00000021097.10	3971	19	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_14	12.1025708930881	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824303	115783420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ENSMUST00000021114.5	chr11	-	1406	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_4	62.9907670591006	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTCCTACTGCAGG	NA	False	NA	9	True	NA	NA	NA	115903545	115899282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ENSMUST00000021116.12	chr11	+	3735	16	FSM	ENSMUSG00000020770.14	ENSMUST00000021116.12	3735	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_13	17.1308688240459	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8822	False	NA	19	True	AATAAA	-13	NA	115921147	115952040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ENSMUST00000021119.9	chr11	-	1530	6	FSM	ENSMUSG00000020774.10	ENSMUST00000021119.9	1530	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	4.1182520563948	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGTGATGACTGTGATA	NA	False	NA	NA	False	ATTAAA	-16	NA	73215460	73195817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73215080
ENSMUST00000021120.6	chr11	-	2204	6	FSM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	42.4951761968344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	116001072	115996577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
ENSMUST00000021130.7	chr11	+	902	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	16.0277537068951	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTGTGCTGATGCGG	9067	False	NA	7	True	AATAAA	-14	NA	116089680	116106144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
ENSMUST00000021133.16	chr11	-	2526	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_9	48.1105209099031	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9817	False	NA	-2	True	ATTAAA	-17	NA	116165043	116135991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ENSMUST00000021134.10	chr11	+	1979	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	26.8730348118704	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCAATACTTACAGGGG	5932	False	NA	NA	False	ATTAAA	-21	NA	115705549	115713920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ENSMUST00000021135.5	chr11	+	2757	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	90	9259	0	-9259	multi-exon	FALSE	canonical	3	251	junction_10	28.6544305280857	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGGAGTGTCATTAT	NA	False	NA	19	True	AATATA	-24	NA	72938698	72970884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ENSMUST00000021142.8	chr11	+	4593	22	FSM	ENSMUSG00000020788.16	ENSMUST00000021142.8	4593	22	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	15.8513502933488	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTAGTCTTTTCTGAG	NA	False	NA	22	True	AATAAA	-22	NA	72851994	72883869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880374_72882514
ENSMUST00000021148.13	chr11	+	3815	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	False	NA	11	True	AATAAA	-20	NA	72498108	72577307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUST00000021148.13-0	chr11	+	1946	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	0	1869	0	-1869	multi-exon	FALSE	canonical	3	783	junction_5	11.0453610171873	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAAGTTGTTGGCTTTT	NA	False	NA	NA	False	AATATA	-16	NA	72498108	72575438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUST00000021157.9	chr11	-	622	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	539	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	14.0079342596338	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGATTGCTCCACTTTGA	NA	False	NA	-5	True	AATAAA	-15	NA	72105879	72102549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
ENSMUST00000021158.4	chr11	+	753	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	0	228	0	-228	multi-exon	FALSE	canonical	3	1302	junction_3	85.4959388249264	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTAAGTTTTTTAACACG	NA	False	NA	16	True	AATAAA	-16	NA	72098372	72100613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ENSMUST00000021161.14	chr11	-	3329	12	FSM	ENSMUSG00000020805.15	ENSMUST00000021161.14	3329	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	6.58196885814471	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGCCTGGCCTTCCTGG	NA	False	NA	0	True	AATAAA	-23	NA	72157485	72132814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151209_72152438_72152576_72152848_72152978_72157289
ENSMUST00000021164.4	chr11	+	1513	6	FSM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	92.1316449435263	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933280	71938196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
ENSMUST00000021170.9	chr11	-	2063	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGTTCTTAAACGTT	6326	False	NA	NA	False	NA	NA	NA	116718872	116693887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
ENSMUST00000021170.9-0	chr11	-	1730	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	0	333	0	-333	multi-exon	FALSE	canonical	3	89	junction_1	18.006171781426	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAAATATGGAGACCGG	6326	False	NA	-5	True	AATAAA	-23	NA	116718872	116694220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
ENSMUST00000021173.14	chr11	+	2433	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	-58	923	0	0	multi-exon	TRUE	canonical	3	74	junction_12	6.07076326887045	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	5	True	AATAAA	-16	NA	116744587	116765538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ENSMUST00000021177.15	chr11	+	2866	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_16	82.8488599423673	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGTCCTTTTCTTCT	NA	False	NA	5	True	AATAAA	-15	NA	117005997	117050091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ENSMUST00000021181.13	chr11	-	779	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	106.829303096107	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128740	70126031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUST00000021183.4	chr11	-	2014	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_8	16.2890556304942	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATCTTTTATTTCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	77971209	77964201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ENSMUST00000021187.12	chr11	+	1779	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	5.93190525885234	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTGGCTCCCGCCTCTT	NA	False	NA	5	True	AATAAA	-17	NA	77923105	77928692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
ENSMUST00000021197.10	chr11	+	2497	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_4	56.5853410915431	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCGGCGTGTCTGGTC	NA	False	NA	30	True	AATAAA	-19	NA	76836329	76878205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUST00000021201.6	chr11	-	7946	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCTTTGTGTGTTGT	NA	False	NA	-6	True	TATAAA	-18	NA	76737844	76669249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ENSMUST00000021201.6-0	chr11	-	7002	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	0	944	0	-944	multi-exon	FALSE	canonical	3	50	junction_17	8.89719056781409	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCTGAACTTGCTGCG	NA	False	NA	NA	False	AATAAA	-11	NA	76737844	76670193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ENSMUST00000021203.7	chr11	+	2817	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCTGATTAAGTCCCAC	NA	False	NA	3	True	AATAAA	-15	NA	76297968	76307118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUST00000021203.7-0	chr11	+	1046	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	48	1723	0	240	multi-exon	FALSE	canonical	3	248	junction_1	9.62635271879577	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCAGTTAGTATCTTT	NA	False	NA	14	True	AGTAAA	-24	NA	76298016	76305395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUST00000021204.4	chr11	-	2755	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGAGTCCTTTTCCCTT	NA	False	NA	NA	False	NA	NA	NA	76289966	76148023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ENSMUST00000021204.4-0	chr11	-	1993	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	0	762	0	-762	multi-exon	FALSE	canonical	3	67	junction_7	17.5905818956785	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTTACTGTGTGCTTAG	NA	False	NA	-7	True	NA	NA	NA	76289966	76148785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ENSMUST00000021207.7	chr11	-	3512	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGGAATGCGTTTGTTT	7887	False	NA	NA	False	AATAAA	-17	NA	75918608	75910019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75913067_75915773_75915884_75918253
ENSMUST00000021207.7-0	chr11	-	992	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	0	2520	0	-2520	multi-exon	FALSE	canonical	3	32	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCTTCCTTAAAAATTT	7887	False	NA	NA	False	AATAGA	-5	NA	75918608	75912539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75913067_75915773_75915884_75918253
ENSMUST00000021217.11	chr11	-	629	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	383	0	-93	0	multi-exon	FALSE	canonical	3	5665	junction_4	866.911327645452	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGTGTTCAGTACTCA	NA	False	NA	-28	True	NA	NA	NA	93846702	93840639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
ENSMUST00000021226.14	chr11	-	3373	11	FSM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	62.20843994186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212814	94181964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUST00000021227.6	chr11	+	1215	5	FSM	ENSMUSG00000020864.14	ENSMUST00000021227.6	1215	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	194.973075064225	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGAAAAGAAAATTTTAA	4247	False	NA	NA	False	AATAAA	-10	NA	94219079	94230335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230065
ENSMUST00000021239.7	chr11	+	2837	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	0	0	0	0	multi-exon	FALSE	canonical	3	2480	junction_6	120.266371026983	4189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520592	94536042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ENSMUST00000021243.16	chr11	+	1523	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	19.5923294939627	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95275517	95282602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUST00000021246.9	chr11	-	2551	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCAAAGCCCTGGCTGC	NA	False	NA	-7	True	AATAAA	-15	NA	96668357	96658380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
ENSMUST00000021246.9-0	chr11	-	2229	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	0	322	0	0	multi-exon	FALSE	canonical	3	53	junction_6	14.0529133990073	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668357	96658702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
ENSMUST00000021249.11	chr11	+	1530	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	16.9597362320652	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTCAAGTCTATT	NA	False	NA	17	True	AATAAA	-23	NA	96920763	96924784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
ENSMUST00000021271.14	chr11	+	4671	23	FSM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_18	7.25181652933985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGACTTTGTGAAATGA	NA	False	NA	NA	False	AATACA	-26	NA	68989773	69000786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68989835_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215_68996450_68997278_68997896_68998358_68998546_68998686_68998877_68999186_68999338_68999906
ENSMUST00000021273.13	chr11	+	2205	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	21.4126131053639	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCCAAAATCTTTT	NA	False	NA	18	True	AATAAA	-18	NA	68979315	68983210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
ENSMUST00000021277.6	chr11	+	1950	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	36.6756327936728	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936477	68942490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUST00000021278.14	chr11	+	4164	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	54.4241833704208	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5086	False	NA	21	True	AATAAA	-21	NA	68906736	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUST00000021282.12	chr11	-	6373	28	FSM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_27	41.3360546031052	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTTTTCCGATGGCCT	NA	False	NA	-11	True	NA	NA	NA	68899286	68876522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ENSMUST00000021284.4	chr11	-	5738	7	FSM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	10.7922297150414	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGCCTTTCTTGGTGGT	NA	False	NA	4	True	AATAAA	-21	NA	68277652	68100189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277435
ENSMUST00000021285.14	chr11	+	839	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	287	3268	0	110	multi-exon	FALSE	canonical	3	260	junction_1	20.1626043021455	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTACCTTGTTTG	NA	False	NA	18	True	AATAAA	-18	NA	67857305	68094706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ENSMUST00000021286.11	chr11	+	1638	5	FSM	ENSMUSG00000020903.14	ENSMUST00000021286.11	1638	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	126.986957991756	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGAGTGTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	67857294	67878433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67877150
ENSMUST00000021287.12	chr11	-	2199	14	FSM	ENSMUSG00000020904.12	ENSMUST00000021287.12	2199	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	5.45557637738374	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTTTTCTGTGTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	67856468	67815633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_67816095_67817204_67817317_67818134_67818238_67821554_67821707_67822549_67822696_67826649_67826799_67829742_67829914_67830604_67830706_67836178_67836296_67837123_67837224_67840393_67840523_67844306_67844444_67844797_67844998_67856347
ENSMUST00000021288.10	chr11	-	4462	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	4.31950960935453	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTTCCTTTCCTTCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	67812979	67745348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ENSMUST00000021296.7	chr11	-	1574	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	22.1710521977545	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4465	False	NA	0	True	AATAAA	-16	NA	102047230	102043371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
ENSMUST00000021297.6	chr11	-	2256	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_1	21.856063231973	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6356	False	NA	-1	True	AATAAA	-23	NA	102076122	102053322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ENSMUST00000021306.14	chr11	-	3324	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_26	264.162864923118	3151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8466	False	NA	-5	True	TATAAA	-22	NA	102771793	102729298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ENSMUST00000021311.10	chr11	-	3326	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_10	31.928809700471	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTGGAAAGTTAGTGCT	3724	False	NA	-7	True	AATAAA	-32	NA	102815950	102796354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ENSMUST00000021313.9	chr11	-	1744	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_2	32.0965340808007	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTCCACTTGGCCT	8193	False	NA	-5	True	NA	NA	NA	102907994	102884872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ENSMUST00000021314.8	chr11	+	4861	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_6	43.300411312535	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCTCCTGGTGTTCTT	NA	False	NA	9	True	AATAAA	-16	NA	102919171	102959738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ENSMUST00000021324.3	chr11	-	4246	16	FSM	ENSMUSG00000020941.8	ENSMUST00000021324.3	4246	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	1.87853370714738	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTTGTAGGCTGTGA	NA	False	NA	NA	False	AATAAA	-15	NA	103158298	103110587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157_103121263_103121857_103121990_103122182_103122313_103128323_103128462_103129757_103130379_103130457_103130669_103131862_103131933_103132940_103133216_103158163
ENSMUST00000021329.14	chr11	-	3266	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	54.6867442804927	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	False	NA	2	True	AATAAA	-31	NA	103588724	103567674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUST00000021332.10	chr12	-	1022	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	0	0	0	0	multi-exon	FALSE	canonical	3	9641	junction_1	417.22073161444	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65120781	65109197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUST00000021335.7	chr12	+	2096	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_5	42.0133700610757	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTATTCTTGTTTGAA	NA	False	NA	15	True	AATAAA	-15	NA	51424362	51496884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUST00000021339.8	chr12	-	1167	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	0	1397	0	-1397	multi-exon	FALSE	canonical	3	170	junction_1	5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCAGTTTTTCTTAA	NA	False	NA	-1	True	AATAAA	-16	NA	52053284	52045686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_52046657_52051661_52051732_52053157
ENSMUST00000021345.14	chr12	-	6064	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATTTTGCAGTTT	1245	False	NA	0	True	AATAAA	-23	NA	91556783	91522035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ENSMUST00000021345.14-0	chr12	-	3971	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	295	1798	-75	1628	multi-exon	FALSE	canonical	3	931	junction_7	74.7277349783867	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGCAGTTTCTAGAGTC	1540	False	NA	NA	False	NA	NA	NA	91556488	91523833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ENSMUST00000021347.12	chr12	-	6300	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGGCGTGTGCCAC	NA	False	NA	-24	True	AATAAA	-18	NA	91815931	91772816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ENSMUST00000021347.12-0	chr12	-	4006	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	0	2294	0	306	multi-exon	FALSE	canonical	3	285	junction_17	38.6834589973544	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTACATTTGTGTGTG	NA	False	NA	-8	True	NA	NA	NA	91815931	91775110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ENSMUST00000021356.6-1	chr12	-	2065	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	1325	0	1325	0	multi-exon	FALSE	canonical	3	240	junction_2	19	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTTACCTACATTCTC	NA	False	NA	-8	True	AATAAA	-16	NA	69243878	69235860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69237169_69239581_69239726_69243265
ENSMUST00000021359.7	chr12	-	1706	19	FSM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_1	34.9372011570955	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	69274969	69248546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ENSMUST00000021362.5	chr12	+	1905	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	0	0	0	0	multi-exon	TRUE	canonical	3	493	junction_10	56.6727937863977	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTTTATCCCACG	NA	False	NA	NA	False	NA	NA	NA	69343495	69357461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ENSMUST00000021368.10	chr12	-	3686	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	0	1046	0	0	multi-exon	TRUE	canonical	3	259	junction_6	33.0300526036517	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403939	69358341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ENSMUST00000021370.10	chr12	-	3340	10	FSM	ENSMUSG00000020988.10	ENSMUST00000021370.10	3340	10	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_5	64.6821287356699	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771647	69737206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753897_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
ENSMUST00000021372.6	chr12	+	1485	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	45.2513811943901	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGGCTAGTCTTTAC	NA	False	NA	2	True	AATAAA	-14	NA	69771735	69791432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ENSMUST00000021375.12	chr12	-	4109	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAGCTATGCTGAAGA	2678	False	NA	-27	True	NA	NA	NA	59058803	59005168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ENSMUST00000021375.12-0	chr12	-	3621	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	82	406	82	-406	multi-exon	FALSE	canonical	3	521	junction_10	53.3728846882441	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2760	False	NA	-9	True	AATAAA	-18	NA	59058721	59005574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ENSMUST00000021379.8	chr12	+	1588	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	0	0	0	0	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTAGTTTAATTTCAC	NA	False	NA	NA	False	TTTAAA	-6	NA	59060178	59075256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUST00000021379.8-0	chr12	+	1002	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	61	525	0	58	multi-exon	FALSE	canonical	1	279	junction_3	161.403565980158	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTGAAATGTCTGTGA	NA	False	NA	6	True	AATATA	-17	NA	59060239	59074731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUST00000021380.10	chr12	-	1255	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	16.4146276229466	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCCATTAATTTAATCA	NA	False	NA	31	True	AATAGA	-14	NA	59108247	59089877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
ENSMUST00000021381.6	chr12	+	3485	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_8	34.8308412186671	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAATATCTTCATTTA	NA	False	NA	9	True	ATTAAA	-43	NA	59113669	59120784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ENSMUST00000021390.9	chr12	-	3832	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	6.15648793956424	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGAATTTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	98225718	98168552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
ENSMUST00000021405.8	chr16	+	950	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_4	109.533955922353	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTCCATTGTCATTGC	904	False	NA	15	True	ATTAAA	-16	NA	20536414	20541017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
ENSMUST00000021406.6	chr12	-	1105	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	27.3898536256157	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGCTCTTTTATTTGT	NA	False	NA	1	True	AATAAA	-40	NA	55126895	55092445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
ENSMUST00000021410.10	chr12	-	1703	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	0	2513	0	-2513	multi-exon	FALSE	canonical	3	69	junction_13	62.3614203298973	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATCTTGCTTACTAG	NA	False	NA	NA	False	AATAAA	-26	NA	55349783	55328288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ENSMUST00000021411.15	chr12	+	3122	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTAGTTGGTTTTGCA	NA	False	NA	19	True	AATAAA	-20	NA	55349421	55429281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
ENSMUST00000021411.15-0	chr12	+	2498	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	624	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	136.205726751851	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTAGTTGGTTTTGCA	NA	False	NA	19	True	AATAAA	-20	NA	55350045	55429281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
ENSMUST00000021412.9	chr12	+	1042	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_5	124.008960249743	640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGTGCATCCTGTCTTT	NA	False	NA	16	True	AATAAA	-17	NA	55445559	55465239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
ENSMUST00000021413.9	chr12	-	1578	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	20.9914268214431	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCCCGCTCGTTTGC	NA	False	NA	-2	True	ATTAAA	-17	NA	55539432	55536194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUST00000021416.9	chr12	-	1512	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	38.7193427113633	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATGTCTTTTTTACTGT	NA	False	NA	NA	False	AATAAA	-33	NA	56392679	56375087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ENSMUST00000021424.5	chr12	-	2015	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	114	4581	0	0	multi-exon	FALSE	canonical	3	499	junction_2	40.0427457550466	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATTCTACTTGTGAA	8810	False	NA	-11	True	ATTAAA	-14	NA	87435015	87356412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ENSMUST00000021425.8	chr12	+	1377	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	0	0	0	0	multi-exon	FALSE	canonical	3	2699	junction_7	143.152890295656	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTCTTACAATCTAT	NA	False	NA	-2	True	AGTAAA	-16	NA	87313471	87320753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUST00000021428.9	chr12	-	2232	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_13	97.7330623652505	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTTATTTAGTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	87519044	87496679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ENSMUST00000021438.8	chr12	-	4177	5	FSM	ENSMUSG00000021047.8	ENSMUST00000021438.8	7154	5	-407	3384	-407	3174	multi-exon	FALSE	canonical	3	11	junction_1	3.56195171219375	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCACTTGTCTCCCGTCT	NA	False	NA	-5	True	TATAAA	-21	NA	46866119	46744683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_46747757_46760280_46760353_46767472_46767640_46863668_46863813_46865398
ENSMUST00000021443.7	chr12	+	3241	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	0	0	0	0	multi-exon	TRUE	canonical	3	837	junction_20	135.484134190258	2203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGTGTTGAAACATAAA	7911	False	NA	9	True	AATAAA	-17	NA	76302071	76366577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUST00000021447.9	chr12	-	4810	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTGGATGCAGGGATA	NA	False	NA	NA	False	AATAAA	-33	NA	75642974	75497654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ENSMUST00000021447.9-0	chr12	-	3237	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	-45	1618	0	0	multi-exon	FALSE	canonical	3	142	junction_9	26.0225209699817	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATCAAAGGTGCATC	NA	False	NA	-16	True	AATAAA	-14	NA	75643019	75499272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ENSMUST00000021450.6	chr12	-	3323	3	FSM	ENSMUSG00000021054.7	ENSMUST00000021450.6	3323	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0.5	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTTCACATGTCTG	NA	False	NA	NA	False	AATAAA	-38	NA	75782503	75761022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_75763439_75769425_75769516_75781686
ENSMUST00000021459.14	chr12	-	3158	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	4.01732359773132	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGGGTCTGTATGAA	NA	False	NA	-2	True	AATAAA	-18	NA	76869327	76844733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
ENSMUST00000021466.10	chr12	+	2598	15	FSM	ENSMUSG00000021066.10	ENSMUST00000021466.10	5150	15	161	2391	161	0	multi-exon	FALSE	canonical	1	5	junction_5	4.65766868197174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATGCTCACTGGCT	9135	False	NA	7	True	ATTAAA	-21	NA	69940039	70010800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006247_70007321_70007337_70010001
ENSMUST00000021467.8	chr12	-	2524	5	FSM	ENSMUSG00000021067.9	ENSMUST00000021467.8	2524	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	6.57171971404746	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTCCTTGAATGCA	NA	False	NA	-14	True	ATTAAA	-17	NA	70033776	70011785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031427_70033447
ENSMUST00000021471.13	chr12	+	2795	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_7	45.1044140108849	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGTGTTCTCATAAG	NA	False	NA	13	True	ATTAAA	-16	NA	70499868	70514814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUST00000021479.6	chr12	+	1307	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	58	2657	0	0	multi-exon	FALSE	canonical	3	306	junction_4	23.8006769278149	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCTTGCTTATTTCAA	9703	False	NA	NA	False	AATAAA	-13	NA	70984688	71008835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ENSMUST00000021486.10	chr12	-	794	4	FSM	ENSMUSG00000021079.17	ENSMUST00000021486.10	794	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	97.112763779479	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGTCTTTACTGTAT	NA	False	NA	-18	True	AATAAA	-13	NA	71183447	71169946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71183328
ENSMUST00000021497.16	chr12	-	1544	7	FSM	ENSMUSG00000021087.19	ENSMUST00000021497.16	1544	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATTTCTCTCTGTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	72283498	72258526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
ENSMUST00000021512.11	chr12	-	1385	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	5.61990510002912	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGACTGCAGACTTAGA	NA	False	NA	43	True	AATAAA	-16	NA	72711683	72697126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
ENSMUST00000021513.6	chr12	-	1268	3	FSM	ENSMUSG00000021095.6	ENSMUST00000021513.6	1268	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	3	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTTCCTACCCTCGTG	NA	False	NA	-11	True	AATAAA	-26	NA	104439589	104437467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_104437906_104438251_104438512_104439019
ENSMUST00000021514.10	chr12	+	2309	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	104	5255	0	0	multi-exon	FALSE	canonical	3	299	junction_3	38.6336640768126	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCATGTATGCGTGAT	NA	False	NA	NA	False	AATAAA	-23	NA	72808088	72841338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ENSMUST00000021522.5	chr12	+	877	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	-2	2050	0	117	multi-exon	FALSE	canonical	3	651	junction_1	0	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTGTGAGTCATTAAA	6358	False	NA	14	True	ATTAAA	-14	NA	104998946	105007115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_104999242_105006533
ENSMUST00000021523.7	chr12	+	1368	8	FSM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	0	1137	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	110.46488037344	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGTGGGATTTTTT	NA	False	NA	6	True	AATAAA	-16	NA	73170490	73319625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ENSMUST00000021527.15	chr12	+	3545	14	FSM	ENSMUSG00000021108.19	ENSMUST00000021527.15	3545	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.36532966988113	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGAGAAGAGTGATTT	NA	False	NA	NA	False	AATAAA	-24	NA	73631570	73824959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_73632300_73696065_73696130_73738321_73738473_73739705_73739741_73742960_73743050_73744690_73744821_73746954_73747083_73749211_73749356_73749512_73749687_73768509_73768665_73805659_73805799_73806326_73806516_73822163_73822308_73823685
ENSMUST00000021530.8	chr12	+	4724	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_10	63.740545517411	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCATATCTTTCTAGTTC	8358	False	NA	11	True	AATAAA	-22	NA	73954677	73994304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUST00000021532.6	chr12	+	6275	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTATTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	74011299	74035740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ENSMUST00000021532.6-0	chr12	+	1694	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	0	4581	0	278	multi-exon	FALSE	canonical	3	65	junction_3	11.7473401244707	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATCTTCTAGTGTGTG	NA	False	NA	3	True	AATAAA	-15	NA	74011299	74031159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ENSMUST00000021536.9	chr12	-	1304	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	86	2277	-57	0	multi-exon	FALSE	canonical	3	904	junction_8	86.5761947650739	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAATGATTTTAAAAACA	55	False	NA	-21	True	TTTAAA	-18	NA	78908326	78889775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ENSMUST00000021539.16	chr12	+	1742	15	FSM	ENSMUSG00000021115.16	ENSMUST00000021539.16	1742	15	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_12	308.222032678671	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGTTTATTGAATG	NA	False	NA	23	True	AATAAA	-29	NA	105976574	106041668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106039877_106039938_106041265
ENSMUST00000021544.8	chr12	-	1583	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	8.60868021243675	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTCTTGTAGTTA	NA	False	NA	0	True	AATAAA	-21	NA	78953738	78935464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
ENSMUST00000021547.8	chr12	-	9391	42	FSM	ENSMUSG00000066440.6	ENSMUST00000021547.8	9391	42	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_36	10.4802014412253	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTAGCTTCATCAGCTT	NA	False	NA	-5	True	AATAAA	-17	NA	79343078	79279119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79280944_79283387_79283433_79283946_79284130_79285095_79285156_79285677_79285820_79286630_79286831_79287669_79287868_79291045_79291265_79292808_79293019_79293244_79293393_79296236_79296458_79297927_79298065_79298922_79298955_79302003_79302141_79304188_79304353_79307574_79307674_79308351_79308599_79310546_79310724_79311084_79311208_79312461_79312567_79313131_79313329_79315132_79315876_79317611_79317715_79318840_79319060_79320066_79320232_79320330_79320451_79321625_79321890_79323016_79323219_79325181_79325334_79325863_79325933_79326816_79326904_79327130_79327740_79329575_79329777_79330809_79330974_79332032_79332122_79332255_79332421_79332979_79333102_79334148_79334654_79337647_79337738_79340599_79340679_79342250_79342547_79342999
ENSMUST00000021548.12	chr12	+	1678	7	FSM	ENSMUSG00000021123.13	ENSMUST00000021548.12	1678	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTGTCTTTTCTCAG	375	False	NA	NA	False	AATAAA	-19	NA	79255687	79269439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_79255883_79257614_79257734_79258161_79258318_79259426_79259532_79260317_79260528_79265449_79265640_79268736
ENSMUST00000021552.3	chr12	-	2990	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	0	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTCTATAGGTTTTT	9167	False	NA	92	True	AATAAA	-18	NA	80159787	80154527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_80157323_80159592
ENSMUST00000021554.16	chr12	-	3734	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_2	44.8659113358906	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	80307145	80214320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUST00000021558.8	chr12	+	3922	15	FSM	ENSMUSG00000021130.9	ENSMUST00000021558.8	3922	15	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	4.40141442942968	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGATGCCTTTATTTCAG	NA	False	NA	9	True	AATAAA	-24	NA	80565763	80650672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80566120_80619072_80619231_80622632_80622732_80623275_80623344_80624161_80624228_80626738_80626861_80627995_80628084_80630423_80630509_80630786_80630891_80635232_80635360_80637368_80637462_80639174_80639259_80643854_80643997_80644791_80644918_80648468
ENSMUST00000021559.14	chr12	-	644	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	493	156	0	-156	multi-exon	FALSE	canonical	3	8000	junction_3	570.898122843881	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTTCCGGTCCTTGAA	NA	False	NA	NA	False	AATACA	-26	NA	80690622	80680951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ENSMUST00000021564.11	chr12	+	3439	13	FSM	ENSMUSG00000021136.14	ENSMUST00000021564.11	3439	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	31.9699294476683	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTGGTGCCTCTTTCT	NA	False	NA	13	True	AATAAA	-15	NA	81073601	81233184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ENSMUST00000021572.11	chr13	-	4526	14	FSM	ENSMUSG00000021147.18	ENSMUST00000021572.11	4526	14	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	12.9902102419544	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTATAAAGGTTTGT	NA	False	NA	-29	True	ATTAAA	-18	NA	8921080	8853030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ENSMUST00000021574.8	chr13	-	2442	16	FSM	ENSMUSG00000021149.9	ENSMUST00000021574.8	2442	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	264.705085372802	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	AATAAA	-41	NA	9046086	9022515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037996_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9045984
ENSMUST00000021592.16	chr12	+	2957	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	34.4673758792282	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807249	117842441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUST00000021594.5	chr12	+	2019	15	FSM	ENSMUSG00000021177.17	ENSMUST00000021594.5	2019	15	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_14	30.3943469502243	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTACAGGCCTGG	NA	False	NA	14	True	ATTAAA	-14	NA	99857431	99921473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUST00000021595.10	chr12	+	1591	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	0	0	0	0	multi-exon	FALSE	canonical	3	1446	junction_1	298.758363899657	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGTTCATTTT	3973	False	NA	12	True	NA	NA	NA	100076412	100089664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUST00000021596.9	chr12	-	3718	14	FSM	ENSMUSG00000021179.9	ENSMUST00000021596.9	3718	14	0	0	0	0	multi-exon	TRUE	canonical	2	41	junction_5	13.3828469211889	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8556	False	NA	-5	True	GATAAA	-15	NA	100125907	100091710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
ENSMUST00000021605.14	chr12	-	9873	21	FSM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_20	4.94064773081425	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTTCGTCCACAATAA	7421	False	NA	NA	False	AATAAA	-17	NA	101879526	101800301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ENSMUST00000021606.12	chr12	-	5363	11	FSM	ENSMUSG00000021189.12	ENSMUST00000021606.12	5363	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	46.8375917399689	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCTATTTCTAATTT	NA	False	NA	-5	True	AATAAA	-20	NA	101924505	101885159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ENSMUST00000021607.9	chr12	-	1990	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	48.4071734133467	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTTTCTGGACTCT	7489	False	NA	-17	True	AAAACA	-15	NA	102406072	102360356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ENSMUST00000021609.10	chr12	+	3390	13	FSM	ENSMUSG00000021192.17	ENSMUST00000021609.10	3390	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	41.9333962638637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGTGCTTTATATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	102435450	102464166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_102436241_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ENSMUST00000021610.7	chr12	+	1883	8	FSM	ENSMUSG00000021194.7	ENSMUST00000021610.7	1883	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	6.51841974088562	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTTGATTTATTTTCG	NA	False	NA	24	True	AATAAA	-18	NA	102521227	102531287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_102521430_102522143_102522191_102524724_102524819_102525547_102525617_102527603_102527763_102527925_102528343_102528856_102529333_102530868
ENSMUST00000021614.14	chr13	-	2679	22	FSM	ENSMUSG00000021196.15	ENSMUST00000021614.14	2679	22	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	371.222751277127	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	False	NA	-14	True	ATTAAA	-10	NA	6698761	6631217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6643290_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUST00000021620.13	chr12	+	2791	6	FSM	ENSMUSG00000021203.16	ENSMUST00000021620.13	2791	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	8.60232526704263	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTCTGGCTTCTTAA	8176	False	NA	NA	False	ATTAAA	-16	NA	103354956	103372604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
ENSMUST00000021631.12	chr12	+	3964	25	FSM	ENSMUSG00000021209.13	ENSMUST00000021631.12	3964	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.55232800084976	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGTATTTGTGAGAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	103498541	103580090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_103499002_103500329_103500404_103524626_103524730_103542539_103542688_103543093_103543168_103545250_103545358_103547637_103547746_103550314_103550437_103551965_103552089_103553209_103553380_103553695_103553816_103557037_103557116_103557785_103557870_103559254_103559438_103562649_103562756_103564359_103564508_103566622_103566768_103567621_103567664_103567746_103567822_103569209_103569280_103570230_103570318_103571225_103571320_103573159_103573231_103576791_103576940_103579066
ENSMUST00000021645.9	chr12	+	2008	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_9	23.528907060372	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTAATTTTGCCAAA	NA	False	NA	10	True	NA	NA	NA	83567239	83588689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ENSMUST00000021649.8	chr12	+	2196	3	FSM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	1.5	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTATGTTGTCCTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	84034634	84040647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84035256_84037267_84037471_84039275
ENSMUST00000021661.13	chr12	+	1602	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_6	16.3656564409681	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTTTTCCTCTTCTGA	NA	False	NA	17	True	AATAAA	-17	NA	84408741	84420570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUST00000021662.12	chr12	-	4931	15	FSM	ENSMUSG00000021236.17	ENSMUST00000021662.12	4931	15	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_8	4.52656557650139	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTAGCTGTCACTATTT	NA	False	NA	NA	False	AATAAA	-37	NA	84452250	84420630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179
ENSMUST00000021666.6	chr12	-	2309	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_18	37.2765772285566	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAGAAAACTGGT	NA	False	NA	NA	False	NA	NA	NA	84664144	84649426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ENSMUST00000021668.10	chr12	-	3299	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	0	0	0	0	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATCCTGGATGCCTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	84819926	84801335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ENSMUST00000021668.10-0	chr12	-	1131	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	238	1930	0	0	multi-exon	FALSE	canonical	3	2850	junction_3	124.194292228839	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCTTGGTTTTGTTTTT	NA	False	NA	-27	True	ATTAAA	-17	NA	84819688	84803265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ENSMUST00000021669.15	chr12	+	749	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	0	0	0	0	multi-exon	FALSE	canonical	3	1900	junction_1	151.77601649692	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTTGTCTCAATTCTTA	4629	False	NA	23	True	ATTAAA	-25	NA	85017670	85030077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUST00000021670.15	chr12	+	7003	21	FSM	ENSMUSG00000021244.16	ENSMUST00000021670.15	7003	21	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	25.0129466476863	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTTTTCTCTTATTT	NA	False	NA	32	True	AATAAA	-42	NA	85043125	85117289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ENSMUST00000021674.7	chr12	+	2108	4	FSM	ENSMUSG00000021250.14	ENSMUST00000021674.7	2108	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.85861230093008	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTTCTTGCTCTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	85520663	85524047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85520955_85521708_85521961_85522365_85522474_85522590
ENSMUST00000021676.12	chr12	-	1169	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_4	65.9104506129339	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGTCTGTGTACTTTGGC	NA	False	NA	-4	True	AATAAA	-21	NA	85871296	85862221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ENSMUST00000021682.9	chr12	-	3850	10	FSM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	10.9341463112378	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTAGCCTTGTTATTG	NA	False	NA	0	True	AATAAA	-19	NA	86773234	86747275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ENSMUST00000021689.14	chr12	+	2180	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	17.7207129833721	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	17	True	AATAAA	-17	NA	108520982	108654775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
ENSMUST00000021692.9	chr12	+	6178	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTTCTTGTTTGTT	NA	False	NA	25	True	AATAAA	-25	NA	108758898	108786074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ENSMUST00000021692.9-0	chr12	+	2234	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	324	3620	324	964	multi-exon	FALSE	canonical	3	62	junction_1	10.779030568655	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTGTAAGCACAGCCT	NA	False	NA	25	True	AATAAA	-33	NA	108759222	108782454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ENSMUST00000021693.4	chr12	-	1976	4	FSM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	5.09901951359278	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGCTCCTCTGTGCGT	NA	False	NA	NA	False	AATAAA	-18	NA	108801809	108791798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108793415_108793599_108793684_108797122_108797167_108801577
ENSMUST00000021698.13	chr12	-	2852	11	FSM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	4154.7402337571	18669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662723	110657461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662215_110662685
ENSMUST00000021706.11	chr12	+	7060	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGGCTCTCTGGCTGTGG	NA	False	NA	9	True	AATAAA	-13	NA	111132896	111233582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ENSMUST00000021706.11-0	chr12	+	2472	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	0	4588	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10.269911118416	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTCTCTGTTTTAAT	NA	False	NA	18	True	AATATA	-25	NA	111132896	111228994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ENSMUST00000021707.8	chr12	+	1701	12	FSM	ENSMUSG00000021278.8	ENSMUST00000021707.8	1701	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.23969772438711	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTCTCAGCCTCCA	NA	False	NA	NA	False	NA	NA	NA	111237528	111242860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111237599_111238130_111238250_111238331_111238377_111240576_111240665_111240792_111241011_111241144_111241283_111241387_111241497_111241590_111241674_111241778_111241927_111242005_111242184_111242266_111242361_111242449
ENSMUST00000021714.9	chr12	+	1308	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	111.029525602677	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	16	True	ATTAAA	-17	NA	111780603	111794820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ENSMUST00000021715.6	chr12	-	2422	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	12.8809303758284	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACTTGCAAATTATT	NA	False	NA	NA	False	AATAAA	-22	NA	111780275	111769626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ENSMUST00000021719.7	chr12	-	366	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	0	0	0	0	multi-exon	TRUE	canonical	3	2424	junction_1	129.659382828839	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCTTCCCCTGAGTA	NA	False	NA	-7	True	AATAAA	-18	NA	111933411	111927808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
ENSMUST00000021726.8	chr12	+	1777	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	10.1005362893924	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACCGAGAGGTCATTAC	NA	False	NA	NA	False	AATAAA	-19	NA	112586478	112607773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
ENSMUST00000021728.12	chr12	+	924	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	6855	False	NA	17	True	AATAAA	-17	NA	112611112	112615579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
ENSMUST00000021728.12-0	chr12	+	726	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	198	0	-90	0	multi-exon	FALSE	canonical	3	1700	junction_3	44.6542271235322	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7053	False	NA	17	True	AATAAA	-17	NA	112611310	112615579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
ENSMUST00000021738.10	chr13	-	2971	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	74.282680798869	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	13568199	13532204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUST00000021772.4	chr13	-	7035	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTGGACATTGTCATT	NA	False	NA	1	True	AATAAA	-17	NA	25204362	25171465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ENSMUST00000021772.4-0	chr13	-	1525	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	53	5457	53	676	multi-exon	FALSE	canonical	3	167	junction_5	19.2792634714089	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTTTGAGACTAAGAAG	NA	False	NA	-5	True	ACTAAA	-44	NA	25204309	25176922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ENSMUST00000021785.8	chr13	-	4256	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_19	19.2909994862811	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	False	NA	-2	True	AATAAA	-20	NA	31158037	30997901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ENSMUST00000021790.7	chr13	+	914	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_2	43.7154434954056	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCGTCTTTGTTAG	NA	False	NA	15	True	AATAAA	-22	NA	41169767	41176062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ENSMUST00000021793.15	chr13	-	3840	8	FSM	ENSMUSG00000021364.17	ENSMUST00000021793.15	3840	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	7.79848232226067	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTAGATTCTTAATTCA	7559	False	NA	NA	False	AATAAA	-18	NA	41373881	41335856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373830
ENSMUST00000021796.9	chr13	+	2139	5	FSM	ENSMUSG00000021367.9	ENSMUST00000021796.9	2139	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTGTGAATTATTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	42454951	42461466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_42455435_42457032_42457202_42458421_42458581_42458730_42458845_42460252
ENSMUST00000021797.9	chr13	-	1239	8	FSM	ENSMUSG00000021368.16	ENSMUST00000021797.9	1239	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	94.4833426632246	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCCTGGCGTGGCCAT	NA	False	NA	-21	True	AGTAAA	-12	NA	43324977	43305219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324804
ENSMUST00000021800.6	chr13	-	4339	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	32.5720355519885	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGTACAGTGTTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	43713637	43691868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ENSMUST00000021802.16	chr13	+	3713	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTTTTGTTGTCAATA	NA	False	NA	NA	False	AATAAA	-7	NA	46655323	46803757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ENSMUST00000021802.16-0	chr13	+	2843	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	224	646	-53	0	multi-exon	FALSE	canonical	3	12	junction_1	4.58257569495584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGATGAATTCTCATTT	NA	False	NA	NA	False	AGTAAA	-32	NA	46655547	46803111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ENSMUST00000021803.10	chr13	-	6109	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	0	0	0	0	multi-exon	TRUE	canonical	3	242	junction_11	30.6722857910241	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACAACCCTTTCTGTTTG	NA	False	NA	-33	True	AATAAA	-1	NA	46881416	46833380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ENSMUST00000021806.11	chr13	-	2708	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGAGCTTGGTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	47196686	47177018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ENSMUST00000021806.11-0	chr13	-	1006	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	66	1636	0	0	multi-exon	FALSE	canonical	3	68	junction_8	22.6436387314407	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196620	47178654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ENSMUST00000021807.13	chr13	-	2556	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_10	113.482333426838	2407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259666	47238257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ENSMUST00000021810.3	chr13	+	3849	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	7	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGAAGTTTGTGGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	48414703	48419502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_48415415_48415760_48415824_48416427
ENSMUST00000021810.3-1	chr13	+	2447	3	FSM	ENSMUSG00000021379.3	ENSMUST00000021810.3	3849	3	-111	1513	-111	-1513	multi-exon	FALSE	canonical	3	109	junction_1	7	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTTCTGATGTGATT	NA	False	NA	3	True	ATTAAA	-22	NA	48414592	48417989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_48415415_48415760_48415824_48416427
ENSMUST00000021818.9	chr13	-	1144	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	22.1387092889263	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTGCTTTGTACAGTT	NA	False	NA	-4	True	AATAAA	-21	NA	49806261	49617498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ENSMUST00000021824.8	chr13	+	4242	18	FSM	ENSMUSG00000021392.9	ENSMUST00000021824.8	4242	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	39.8711592828771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGTCTTTTATTTAAAA	NA	False	NA	22	True	ATTAAA	-15	NA	49806825	49832491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49806874_49807004_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813495_49814433_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ENSMUST00000021828.6	chr13	+	1167	2	FSM	ENSMUSG00000021396.6	ENSMUST00000021828.6	1167	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTCTGATGTCCTTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	51325057	51329224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_51325661_51328660
ENSMUST00000021832.7	chr13	+	2633	7	FSM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	20.5081284697881	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTTCTTCAGTGTT	NA	False	NA	14	True	AATAAA	-15	NA	32986020	33006592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201_33004358_33005021_33005102_33005866
ENSMUST00000021843.13	chr13	+	1063	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTTGCACTGTATTAG	NA	False	NA	13	True	AATACA	-25	NA	34148733	34169629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUST00000021843.13-0	chr13	+	3860	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	0	-2797	0	0	multi-exon	FALSE	canonical	3	53	junction_2	70.4179939898249	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTCTCATTTATATC	NA	False	NA	14	True	ATTAAA	-18	NA	34148733	34172426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUST00000021844.15	chr13	+	3266	11	FSM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	4.38634243989226	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAGTGTGCTGTACAAA	NA	False	NA	1	True	NA	NA	NA	34186345	34217660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ENSMUST00000021853.12	chr13	-	1171	9	FSM	ENSMUSG00000021416.12	ENSMUST00000021853.12	1347	9	0	176	0	-176	multi-exon	TRUE	canonical	2	6	junction_1	1.69096865730859	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGCCTTATGAGTTTAT	NA	False	NA	NA	False	AATAAA	-13	NA	35147793	35130772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_35131074_35132054_35132199_35132727_35132818_35136963_35137085_35138064_35138165_35140843_35140914_35143856_35144046_35144383_35144483_35147736
ENSMUST00000021857.13	chr13	+	2125	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301394	36721567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000021857.13-0	chr13	+	1657	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	468	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	25.2300526268883	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301862	36721567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000021864.8	chr13	-	2477	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	60	6796	0	-6796	multi-exon	FALSE	canonical	3	888	junction_3	64.8026832399866	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCTGTATAATCTGT	5906	False	NA	-45	True	AATATA	-16	NA	38178133	38162172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUST00000021866.10	chr13	+	2738	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	18.4889113727661	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	4488	False	NA	18	True	AATAAA	-19	NA	38220970	38245409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUST00000021900.14	chr13	-	4482	16	FSM	ENSMUSG00000021451.17	ENSMUST00000021900.14	4482	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_9	25.4317387005555	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGCCTTTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	51947783	51855281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
ENSMUST00000021903.3	chr13	+	1071	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	4.02768199119819	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACTTAATGCCTTTT	NA	False	NA	NA	False	AATAAA	-8	NA	52000713	52002504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
ENSMUST00000021907.9	chr13	-	1354	7	FSM	ENSMUSG00000021456.9	ENSMUST00000021907.9	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	7.5	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTATGGGTCTTCTG	NA	False	NA	2	True	AATAAA	-20	NA	63006236	62984690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62985095_62988084_62988205_62989599_62989738_62997190_62997332_63001787_63001881_63002717_63002881_63005941
ENSMUST00000021913.16	chr13	-	1320	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_3	77.7090172246741	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	False	NA	-14	True	AATAAA	-22	NA	53083697	52989154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ENSMUST00000021918.10	chr13	-	3985	9	FSM	ENSMUSG00000021464.16	ENSMUST00000021918.10	3985	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	5.12195031213697	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	-28	True	NA	NA	NA	53440160	53263352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
ENSMUST00000021920.8	chr13	-	2606	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_11	13.0690864412232	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTTTGGATAGCAG	1829	False	NA	-18	True	AATAAA	-27	NA	53531433	53486783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ENSMUST00000021921.11	chr13	-	7725	23	FSM	ENSMUSG00000021466.13	ENSMUST00000021921.11	7725	23	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_22	19.9826887890411	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGTTTCTAGAATGT	NA	False	NA	0	True	AATAAA	-23	NA	63713549	63656141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63713175
ENSMUST00000021922.10	chr13	-	1208	2	FSM	ENSMUSG00000021469.10	ENSMUST00000021922.10	2453	2	238	1007	238	-1007	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCAGATGTAAAAATTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	53626872	53621926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_53622630_53626367
ENSMUST00000021929.10	chr13	+	2564	8	FSM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_6	9.99183340002612	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTTATTCATTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	64309682	64334351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
ENSMUST00000021930.10	chr13	+	2783	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_1	55.358919787149	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	54225887	54262361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUST00000021933.8	chr13	-	1971	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	0	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAAGTCTCATATCTG	NA	False	NA	NA	False	NA	NA	NA	64518120	64511027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ENSMUST00000021933.8-0	chr13	-	1389	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	0	582	0	-582	multi-exon	FALSE	canonical	3	1187	junction_3	95.3616103822386	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGACTTCAGTGTGTAA	NA	False	NA	-6	True	AATAAA	-22	NA	64518120	64511609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ENSMUST00000021937.12	chr13	+	3333	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	9.82202739877171	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCGATGTGTGCGCT	19	False	NA	11	True	NA	NA	NA	55253139	55282638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ENSMUST00000021939.8	chr13	+	1837	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	228	2053	0	0	multi-exon	TRUE	canonical	3	37	junction_1	3.65892813567591	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCTTGTGTTTTATTT	NA	False	NA	15	True	AATAAA	-15	NA	64580355	64587534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
ENSMUST00000021940.8	chr13	-	4315	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	0	0	0	0	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGAGTTGTGTGCTCTGT	2839	False	NA	-3	True	NA	NA	NA	55510596	55491645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUST00000021940.8-0	chr13	-	1230	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	172	2913	0	-153	multi-exon	FALSE	canonical	3	2192	junction_4	110.260729960528	1869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTCTTGCCCAGCT	3011	False	NA	-7	True	ATTAAA	-13	NA	55510424	55494558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUST00000021941.8	chr13	-	1327	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGTACAGTCTATCACC	6155	False	NA	-7	True	NA	NA	NA	55477571	55472980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
ENSMUST00000021941.8-0	chr13	-	988	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	25	314	0	0	multi-exon	FALSE	canonical	3	87	junction_2	5.62138772902208	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTCCTGTCCATGGTTT	6180	False	NA	-3	True	ATTAAA	-12	NA	55477546	55473294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
ENSMUST00000021942.8	chr13	+	2644	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	0	0	0	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	4034	False	NA	18	True	NA	NA	NA	55468312	55473085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ENSMUST00000021942.8-0	chr13	+	1125	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	1519	0	0	0	multi-exon	FALSE	canonical	3	1299	junction_2	62.1248742453456	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGAGTCAGATAGCTT	5553	False	NA	18	True	NA	NA	NA	55469831	55473085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ENSMUST00000021956.9	chr13	-	2205	17	FSM	ENSMUSG00000021494.10	ENSMUST00000021956.9	2205	17	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCTCTCACCCACCTG	NA	False	NA	1	True	ATTAAA	-27	NA	55684471	55678222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ENSMUST00000021957.8	chr13	-	4341	11	FSM	ENSMUSG00000021495.11	ENSMUST00000021957.8	4341	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	46.3227805728456	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTATGATGGTGATTTG	NA	False	NA	-4	True	GATAAA	-19	NA	55718933	55687128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
ENSMUST00000021958.6	chr13	+	544	4	FSM	ENSMUSG00000021496.13	ENSMUST00000021958.6	544	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGAGTTATTTGTCAT	NA	False	NA	13	True	AATACA	-16	NA	55875180	55924641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
ENSMUST00000021959.11	chr13	+	1527	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	13.4257215820976	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	False	NA	18	True	AATAAA	-14	NA	55862462	55874040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
ENSMUST00000021963.5	chr13	+	1382	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	4.49691252107735	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGAAGTCTGTACATT	NA	False	NA	NA	False	AATAAA	-21	NA	55770817	55780224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
ENSMUST00000021968.7	chr13	-	2451	3	FSM	ENSMUSG00000021506.8	ENSMUST00000021968.7	2451	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGAGCCCTAGCTGCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	55979238	55972863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55974425_55976252_55976489_55978584
ENSMUST00000021970.11	chr13	-	1827	4	FSM	ENSMUSG00000021508.12	ENSMUST00000021970.11	1827	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	5.8878405775519	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTACTCCTGGGCTGTT	NA	False	NA	2	True	AATAAA	-22	NA	56444364	56436455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_56437621_56440273_56440388_56443638_56443745_56443922
ENSMUST00000021990.4	chr13	+	3424	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCTTTCTCTCTCTCT	7858	False	NA	NA	False	TATAAA	-12	NA	67080893	67146465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ENSMUST00000021990.4-1	chr13	+	2648	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	386	390	0	-115	multi-exon	FALSE	canonical	3	153	junction_7	19.2476549798209	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTAGAATGATGT	8244	False	NA	31	True	ATTAAA	-17	NA	67081279	67146075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ENSMUST00000021991.11	chr13	-	1479	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_6	16.4005973012185	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	377	False	NA	NA	False	AATAAA	-18	NA	67081152	67060181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUST00000021993.5	chr13	-	535	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	4784	junction_3	381.861231339344	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	7712	False	NA	-25	True	AATAAA	-18	NA	67053442	67048680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
ENSMUST00000021997.8	chr13	+	2591	4	FSM	ENSMUSG00000058900.6	ENSMUST00000021997.8	2591	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	10.6144555520604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGTATCTCATCTTA	NA	False	NA	NA	False	AATAAA	-25	NA	67321245	67332108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67321318_67324511_67324639_67325128_67325225_67329812
ENSMUST00000022009.10	chr13	+	1226	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAATAGTCTGGAACATT	NA	False	NA	NA	False	AATAAA	-15	NA	81931195	81945274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ENSMUST00000022009.10-1	chr13	+	904	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	201	121	0	118	multi-exon	FALSE	canonical	3	1314	junction_2	32.392128673491	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTTTGGTAAATTT	NA	False	NA	8	True	AATAAA	-19	NA	81931396	81945153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ENSMUST00000022030.11	chr13	+	2045	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337526	85361842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUST00000022030.11-0	chr13	+	1192	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	40	813	0	0	multi-exon	FALSE	canonical	3	824	junction_5	83.2840583485219	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337566	85361029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUST00000022032.7	chr13	-	3051	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	0	0	0	0	multi-exon	TRUE	canonical	3	402	junction_2	21.2289111041209	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTAGATTTTGATAC	NA	False	NA	NA	False	NA	NA	NA	58533039	58527630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ENSMUST00000022032.7-0	chr13	-	1186	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	0	1865	0	-1865	multi-exon	FALSE	canonical	3	402	junction_2	21.2289111041209	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGGTGCACGCCTTT	NA	False	NA	-17	True	TATAAA	-19	NA	58533039	58529495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ENSMUST00000022036.14	chr13	-	4567	18	FSM	ENSMUSG00000021553.15	ENSMUST00000022036.14	4567	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.22545097976469	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGATTATTTGTTGGTT	3618	False	NA	NA	False	NA	NA	NA	58758691	58701118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58703631_58706022_58706135_58706366_58706466_58707022_58707105_58710828_58711027_58711830_58712000_58714038_58714170_58717090_58717217_58719258_58719340_58720370_58720452_58721257_58721336_58722054_58722169_58724538_58724684_58726218_58726409_58728328_58728421_58730427_58730514_58735995_58736086_58758510
ENSMUST00000022038.15	chr13	+	2524	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	99	1170	0	0	multi-exon	FALSE	canonical	3	649	junction_6	70.4314478267713	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUST00000022039.7	chr13	-	3584	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	0	370	0	0	multi-exon	FALSE	canonical	3	421	junction_9	46.3947102135844	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823625	59782809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ENSMUST00000022040.14	chr13	-	4368	26	FSM	ENSMUSG00000021557.16	ENSMUST00000022040.14	8174	26	11	3795	0	0	multi-exon	FALSE	canonical	2	7	junction_25	6.92242731995071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTCTTGTCATCTTT	1066	False	NA	-3	True	AATAAA	-17	NA	59705114	59597350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ENSMUST00000022053.11	chr13	-	2207	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	81	1111	81	0	multi-exon	FALSE	canonical	3	435	junction_6	23.4319345243955	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74085822	74060576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ENSMUST00000022060.7	chr13	-	1131	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_2	85.1666601435092	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGCTGGTTTTTTGCT	NA	False	NA	1	True	AATAAA	-25	NA	74465440	74451627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUST00000022062.8	chr13	-	2900	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_7	176.694897308026	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498399	74470372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ENSMUST00000022075.6	chr13	+	5040	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	4.93268293596351	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTCATGAGAATAAGAAT	NA	False	NA	NA	False	AATAAA	-20	NA	75237944	75282980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
ENSMUST00000022075.6-0	chr13	+	2293	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	384	2363	294	-2363	multi-exon	FALSE	canonical	1	7	junction_5	4.93268293596351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTCAGTGTTTAAGAGTA	NA	False	NA	NA	False	AATGAA	-17	NA	75238328	75280617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
ENSMUST00000022078.12	chr13	-	4980	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	11.3494456849386	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAATGAAGTGTTCTGTA	6646	False	NA	NA	False	AATAAA	-20	NA	76091986	76017655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ENSMUST00000022082.8	chr13	+	1345	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	16	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTGTCCGGTTCTGT	NA	False	NA	30	True	ATTAAA	-22	NA	75987986	75998270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_75988295_75995288_75995418_75997362
ENSMUST00000022087.7	chr13	+	4164	18	FSM	ENSMUSG00000021595.19	ENSMUST00000022087.7	4164	18	0	0	0	0	multi-exon	FALSE	canonical	3	1529	junction_6	134.755603461822	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGTGTGTGCTTGTATT	NA	False	NA	NA	False	AGTAAA	-37	NA	69760362	69783899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUST00000022089.10	chr13	+	913	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_3	16.1314048434171	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGTAATTCTTAAAAT	NA	False	NA	27	True	AATAAA	-23	NA	69957959	69964223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
ENSMUST00000022097.6	chr13	-	568	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	2374	junction_2	33.95094500403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGAGTTGTTTCTTCCTT	NA	False	NA	-3	True	AATAAA	-19	NA	73476661	73467992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
ENSMUST00000022098.10	chr13	+	923	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGAGTAGTAGTGTTCT	NA	False	NA	13	True	ATTAAA	-26	NA	73479106	73480297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_73479211_73479478
ENSMUST00000022099.15	chr13	+	3675	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_10	74.6226800557192	1133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCGAGTGTGTTTTGT	NA	False	NA	23	True	AATAAA	-23	NA	73615315	73664541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUST00000022102.9	chr13	+	2340	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_7	20.082544503872	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTTAACCTCTAAT	NA	False	NA	21	True	AATAAA	-16	NA	73752124	73768724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUST00000022104.9	chr13	+	4313	16	FSM	ENSMUSG00000021611.10	ENSMUST00000022104.9	4313	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5.35163526410386	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTCATACTAATTCG	2128	False	NA	NA	False	AATAAA	-16	NA	73775034	73797962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ENSMUST00000022115.14	chr13	-	1540	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	False	NA	-7	True	AATAAA	-14	NA	90237727	89997039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ENSMUST00000022115.14-0	chr13	-	1468	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	72	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	13.6993966796993	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	False	NA	-7	True	AATAAA	-14	NA	90237655	89997039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ENSMUST00000022119.6	chr13	-	1583	8	FSM	ENSMUSG00000021619.7	ENSMUST00000022119.6	1583	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	11.5121940673747	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGACTACTGTTACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	91372087	91083474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91372057
ENSMUST00000022121.13	chr13	-	1541	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	29.1108227296997	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955824	91944651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ENSMUST00000022135.15	chr13	+	915	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	383	0	0	0	multi-exon	FALSE	canonical	3	650	junction_4	426.823734110464	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATCTCTTTAATAGTA	NA	False	NA	37	True	AATAAA	-14	NA	100787869	100802867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
ENSMUST00000022136.14	chr13	-	2839	17	FSM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_16	42.8397723354128	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787559	100753671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
ENSMUST00000022137.14	chr13	-	3061	7	FSM	ENSMUSG00000021636.16	ENSMUST00000022137.14	3061	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.71404520791032	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTGCTCCTTATT	NA	False	NA	-1	True	ATTAAA	-18	NA	100753479	100732464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753433
ENSMUST00000022140.12	chr13	-	2839	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	20.6272726020674	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTCATTTGATGTCATT	NA	False	NA	NA	False	ATTAAA	-22	NA	100689226	100634270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
ENSMUST00000022145.15	chr13	+	601	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGAATATTATTTTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	100244519	100250746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_100244738_100245530_100245640_100250472
ENSMUST00000022147.15	chr13	+	1222	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	0	0	0	0	multi-exon	TRUE	canonical	3	544	junction_6	97.8154352594722	470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	False	NA	17	True	AATAAA	-13	NA	100261359	100274198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
ENSMUST00000022148.7	chr13	-	2123	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	0	0	0	0	multi-exon	FALSE	canonical	2	186	junction_5	41.3428878405948	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	669	False	NA	-6	True	AATAAA	-15	NA	100152147	100085040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ENSMUST00000022153.8	chr13	-	1704	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_5	28.5894740191448	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGTTGTGTTTCTTTTC	NA	False	NA	-11	True	AATAAA	-16	NA	99481213	99456154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ENSMUST00000022163.15	chr13	-	1091	6	FSM	ENSMUSG00000021660.15	ENSMUST00000022163.15	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_5	2432.68485422999	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTATCATTTTACTTA	NA	False	NA	-16	True	AATAAA	-37	NA	98453475	98446403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453132
ENSMUST00000022163.15-0	chr13	-	893	6	FSM	ENSMUSG00000021660.15	ENSMUST00000022163.15	1091	6	197	1	197	0	multi-exon	FALSE	canonical	3	579	junction_5	2432.68485422999	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453278	98446404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453132
ENSMUST00000022164.16	chr13	+	1755	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	23.3559414282533	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	14	True	AATAAA	-24	NA	98399749	98410426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ENSMUST00000022169.10	chr13	-	1905	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	0	0	0	0	multi-exon	FALSE	canonical	3	2035	junction_5	137.076923076923	2244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTGCCCTGTGTGGAT	NA	False	NA	1	True	AATAAA	-27	NA	97334865	97312838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUST00000022170.8	chr13	+	3089	21	FSM	ENSMUSG00000021666.17	ENSMUST00000022170.8	3089	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.3769033067057	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274547	97312959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282160_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUST00000022172.12	chr13	-	4225	15	FSM	ENSMUSG00000021668.16	ENSMUST00000022172.12	4225	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	5.85191404236116	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTATTGACTGTCATAT	NA	False	NA	NA	False	AATAAA	-20	NA	96678993	96617197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ENSMUST00000022176.15	chr13	-	4425	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_19	35.2932314809179	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTGTAAGCAGTGGCT	NA	False	NA	-5	True	AGTAAA	-22	NA	96807444	96785474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ENSMUST00000022185.10	chr13	-	2741	2	FSM	ENSMUSG00000021678.10	ENSMUST00000022185.10	2741	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGTT	9826	False	NA	NA	False	AATAAA	-16	NA	95661735	95648239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_95650790_95661544
ENSMUST00000022189.9	chr13	-	3249	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	22.6835706778766	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTCTTTGTATTTGC	NA	False	NA	27	True	AATAAA	-14	NA	95511860	95487190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ENSMUST00000022196.5	chr13	+	4021	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_8	45.9393251760748	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTCCTAATCCTTAC	NA	False	NA	9	True	AATAAA	-19	NA	94495467	94702825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ENSMUST00000022197.15	chr13	-	4259	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	9.45300878027732	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATATAGTATAAAAGAGT	NA	False	NA	NA	False	ATTAAA	-30	NA	94422337	94337817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ENSMUST00000022203.10	chr13	+	2051	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_4	50.5395680025492	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCGCCTACAGTTTTTCC	NA	False	NA	NA	False	AGTAAA	-13	NA	107083666	107096268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUST00000022203.10-0	chr13	+	1215	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	-4	840	0	-840	multi-exon	TRUE	canonical	3	504	junction_4	50.5395680025492	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083662	107095428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUST00000022204.16	chr13	-	5304	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTTGTGTGTGTCTG	NA	False	NA	NA	False	AATAAA	-39	NA	107158626	107095503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ENSMUST00000022204.16-1	chr13	-	3952	20	FSM	ENSMUSG00000021693.21	ENSMUST00000022204.16	5304	20	-237	1589	-229	675	multi-exon	FALSE	canonical	3	48	junction_15	23.883141169724	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAATAATGTACTTCA	NA	False	NA	0	True	AATAAA	-19	NA	107158863	107097092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ENSMUST00000022207.10	chr13	+	4013	8	FSM	ENSMUSG00000021696.10	ENSMUST00000022207.10	4013	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	37.4045724586758	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108350937	108422217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108351035_108393200_108393333_108403723_108403915_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ENSMUST00000022212.9	chr13	+	2800	14	FSM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	11.0769230769231	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCTCCTGTCCTTGC	NA	False	NA	6	True	AATAAA	-17	NA	110531579	110537378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
ENSMUST00000022217.9	chr13	-	6150	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_14	7.96662588726756	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCATTTTGTTTACATA	NA	False	NA	NA	False	AATAAA	-44	NA	92667376	92623615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ENSMUST00000022218.6	chr13	+	5347	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCAAATTCTGAAAAGGAA	NA	False	NA	NA	False	AAGAAA	-37	NA	92491233	92525561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUST00000022218.6-0	chr13	+	1557	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	421	3369	421	-3369	multi-exon	FALSE	canonical	3	1135	junction_5	174.184270242752	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTCCTCATCTCAGCA	NA	False	NA	14	True	AATAAA	-17	NA	92491654	92522192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUST00000022220.13	chr13	-	3937	24	FSM	ENSMUSG00000014850.16	ENSMUST00000022220.13	3937	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	29.9229002971439	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGCTCATTGCATGGCG	NA	False	NA	NA	False	AATAAA	-14	NA	92491511	92348393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481610_92483240_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ENSMUST00000022224.16	chr13	-	2342	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	196.200152905139	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGATTTTTTTCTTTC	NA	False	NA	-2	True	AATAAA	-42	NA	104314931	104279824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUST00000022225.12	chr13	+	3416	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	34.1	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGACTGTGACGTATA	NA	False	NA	11	True	AATATA	-25	NA	104315304	104339525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ENSMUST00000022226.6	chr13	-	2342	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	27.1368752806951	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTGTCAAATGAC	NA	False	NA	-13	True	TATAAA	-11	NA	104365330	104341631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ENSMUST00000022228.13	chr13	-	2071	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_8	84.1316241226496	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGCCTCCCGCTTTATT	NA	False	NA	1	True	AATAAA	-37	NA	104953461	104767647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUST00000022230.15	chr13	+	2365	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAAGTCATTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	104953684	104975782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUST00000022230.15-0	chr13	+	1698	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	62	605	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2536228079786	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAAGTGTCTCTGAGGT	NA	False	NA	17	True	TATAAA	-27	NA	104953746	104975177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUST00000022242.9	chr13	+	2923	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTCCTTACTGTTGTCTG	NA	False	NA	NA	False	AATACA	-17	NA	117356807	117410951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUST00000022242.9-1	chr13	+	2264	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	347	312	-97	-312	multi-exon	FALSE	canonical	3	356	junction_8	42.5617198900608	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTGCTGCTGGCTTT	NA	False	NA	NA	False	AATAAA	-28	NA	117357154	117410639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUST00000022245.10	chr13	-	3319	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	0	0	0	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGAGGCCTGAGTGTT	NA	False	NA	NA	False	TTTAAA	-19	NA	118523788	118514916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ENSMUST00000022245.10-0	chr13	-	1428	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	0	1891	0	-1891	multi-exon	FALSE	canonical	3	1748	junction_3	110.939172522604	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAGATTTCTTATGT	NA	False	NA	-15	True	ATTAAA	-15	NA	118523788	118516807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ENSMUST00000022246.9	chr13	+	4114	3	FSM	ENSMUSG00000021732.15	ENSMUST00000022246.9	4114	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	4	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTACTGTTCTTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	118851234	118928651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_118852248_118918041_118918146_118925654
ENSMUST00000022256.5	chr14	+	1387	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	0	0	0	0	multi-exon	FALSE	canonical	3	1151	junction_1	36.7689975886408	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTCTTAAACATACA	NA	False	NA	25	True	AATAAA	-27	NA	8348778	8357589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ENSMUST00000022257.4	chr14	-	6853	12	FSM	ENSMUSG00000021738.6	ENSMUST00000022257.4	6853	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	5.78399044384977	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGCTGGCTGCATGCGTT	NA	False	NA	NA	False	AATAAA	-20	NA	8457272	8362460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8457012
ENSMUST00000022268.10	chr14	+	1513	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	0	0	0	0	multi-exon	FALSE	canonical	3	2290	junction_6	170.664134819183	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296747	14303777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUST00000022272.14	chr14	-	1650	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	7.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGGTTGTATTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	14255633	14246209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_14247587_14249552_14249623_14255430
ENSMUST00000022281.5	chr13	-	3689	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	0	0	0	0	multi-exon	TRUE	canonical	3	524	junction_21	59.6473487509525	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGAATTTCAGGAACC	7236	False	NA	NA	False	AAAAAG	-14	NA	113063932	113003951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ENSMUST00000022281.5-0	chr13	-	3335	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	0	354	0	83	multi-exon	FALSE	canonical	3	524	junction_21	59.6473487509525	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7236	False	NA	-22	True	AATAAA	-21	NA	113063932	113004305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ENSMUST00000022282.6	chr13	-	1042	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	4	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGTGCATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	113182944	113179292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_113179834_113181965_113182228_113182705
ENSMUST00000022286.8	chr13	-	1698	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	0	0	0	0	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCTGTTATGTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	114524794	114424330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ENSMUST00000022286.8-0	chr13	-	667	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	178	853	0	0	multi-exon	FALSE	canonical	3	1521	junction_3	83.4187478927849	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ENSMUST00000022287.8	chr13	-	2311	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	220	-680	-143	0	multi-exon	FALSE	canonical	3	13	junction_1	3.32264954516723	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAAATGT	NA	False	NA	NA	False	TATAAA	-36	NA	114595265	114588825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
ENSMUST00000022292.10	chr14	+	5127	6	FSM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	17	-3570	0	-1854	multi-exon	FALSE	canonical	3	20	junction_1	7.55248303539968	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	2631	False	NA	NA	False	NA	NA	NA	21800615	21846940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ENSMUST00000022293.14	chr14	+	1954	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	0	0	0	0	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGCAGTTTCTAAGTT	NA	False	NA	12	True	AATAAA	-22	NA	21881336	21895947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUST00000022293.14-0	chr14	+	1297	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	297	360	0	0	multi-exon	FALSE	canonical	3	2055	junction_4	139.679350612946	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUST00000022295.4	chr14	-	981	6	FSM	ENSMUSG00000021773.12	ENSMUST00000022295.4	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	9.09065454189081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898962	21897246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_21897496_21897681_21897816_21897940_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUST00000022296.7	chr14	+	1408	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	27.2073519475895	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGCTGTGTTCATTTC	NA	False	NA	24	True	AATAAA	-21	NA	4137836	4186974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ENSMUST00000022310.7	chr14	-	2935	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAGTGAAAGAGTAGCA	NA	False	NA	NA	False	AATAAA	-14	NA	6220483	6157836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ENSMUST00000022310.7-0	chr14	-	2494	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	47	394	0	0	multi-exon	FALSE	canonical	3	40	junction_2	12.9506373690434	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATGCCTTTTCAGTGCT	NA	False	NA	-6	True	AATAAA	-15	NA	6220436	6158230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ENSMUST00000022317.15	chr14	-	1537	6	FSM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	72.4911029023562	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACCTCTGTGCACA	NA	False	NA	-22	True	AATAAA	-11	NA	40735732	40715696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
ENSMUST00000022322.17	chr14	+	3390	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_7	93.7817723938577	2461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTTCTCTATGGGGAC	NA	False	NA	13	True	AATAAA	-22	NA	34032683	34067222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ENSMUST00000022337.11	chr14	-	4332	17	FSM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_16	5.32351798625683	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGACCTCCCGGTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	36820304	36799813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
ENSMUST00000022340.5	chr14	+	4876	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_14	132.834897523204	3135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801332	19861855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUST00000022341.7	chr14	-	996	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	0	566	0	-566	multi-exon	FALSE	canonical	3	1848	junction_5	420.22365279378	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUST00000022343.6	chr14	+	1678	9	FSM	ENSMUSG00000021809.11	ENSMUST00000022343.6	2494	9	0	816	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.70809924354783	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTGTGAAGGTATATTTT	NA	False	NA	NA	False	NA	NA	NA	20344789	20366830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ENSMUST00000022344.4	chr14	-	3132	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTGCTTCCTGTTCCT	NA	False	NA	NA	False	NA	NA	NA	20398189	20369919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ENSMUST00000022344.4-1	chr14	-	2672	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	51	409	0	-409	multi-exon	FALSE	canonical	3	477	junction_8	30.9081479462529	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTAGTGTTCAGTCT	NA	False	NA	-10	True	AATAGA	-7	NA	20398138	20370328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ENSMUST00000022345.7	chr14	-	1631	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	0	0	0	0	multi-exon	TRUE	canonical	3	896	junction_2	62.1711347813437	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTATGTGTTTTGAAC	NA	False	NA	NA	False	ATTAAA	-23	NA	20438978	20434705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ENSMUST00000022355.11	chr14	-	3074	13	FSM	ENSMUSG00000021816.12	ENSMUST00000022355.11	3074	13	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	56.1047507396259	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	NA	False	NA	-1	True	AATAAA	-25	NA	20596580	20550097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20551731_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ENSMUST00000022356.12	chr14	-	6580	21	FSM	ENSMUSG00000034235.18	ENSMUST00000022356.12	6580	21	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_20	12.721929885045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	NA	False	NA	2	True	AATAAA	-23	NA	20691131	20598979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ENSMUST00000022369.9	chr14	+	5267	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	0	0	0	0	multi-exon	TRUE	canonical	3	265	junction_11	15.7968351260624	597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAATTGAGGTTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	20979465	21083744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ENSMUST00000022378.9	chr14	-	4418	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	0	0	0	0	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGTCTTTGGTCAGTT	NA	False	NA	89	True	AATAAA	-20	NA	45556029	45520543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ENSMUST00000022378.9-0	chr14	-	4307	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	0	111	0	-111	multi-exon	FALSE	canonical	2	315	junction_8	121.531596257471	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCACATGACAGCTGT	NA	False	NA	-22	True	NA	NA	NA	45556029	45520654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ENSMUST00000022380.9	chr14	+	2234	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAATGATCCAGCTAGG	NA	False	NA	NA	False	AATAAA	-39	NA	45567244	45587162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUST00000022380.9-1	chr14	+	1563	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	40	631	0	-631	multi-exon	FALSE	canonical	3	1632	junction_5	93.5359944006622	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTTTTCTAA	NA	False	NA	31	True	AATAAA	-23	NA	45567284	45586531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUST00000022391.14	chr14	+	4484	42	FSM	ENSMUSG00000021843.18	ENSMUST00000022391.14	4484	42	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_41	205.185118315409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACTCTGATTGTCGTTG	2353	False	NA	23	True	AATAAA	-23	NA	47901212	47974020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ENSMUST00000022416.15	chr14	+	2394	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	0	0	0	0	multi-exon	TRUE	canonical	3	387	junction_6	25.4603533329122	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	336	False	NA	26	True	AATAAA	-34	NA	25842579	25887228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ENSMUST00000022419.7	chr14	+	1549	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	21.4532048887806	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCTCTGGTTTTGGA	392	False	NA	NA	False	AATAAA	-18	NA	25694593	25700892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
ENSMUST00000022429.9	chr14	+	2165	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	1686	False	NA	NA	False	NA	NA	NA	26359228	26378413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUST00000022429.9-0	chr14	+	1655	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	66	444	66	0	multi-exon	FALSE	canonical	3	1593	junction_4	101.482215190643	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCCTAATAAAATGATTT	1752	False	NA	-22	True	AATGAA	-29	NA	26359294	26377969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUST00000022437.16	chr14	-	2312	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	-322	654	0	116	multi-exon	FALSE	canonical	3	36	junction_9	6.10199762372946	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTGTTTT	6623	False	NA	NA	False	AGTAAA	-32	NA	31363243	31329809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ENSMUST00000022446.7	chr14	+	4918	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	16.2357629940819	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAGAAT	5602	False	NA	NA	False	NA	NA	NA	31216355	31231815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
ENSMUST00000022450.6	chr14	+	7590	24	FSM	ENSMUSG00000040651.10	ENSMUST00000022450.6	7590	24	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_17	57.5794347345285	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8928	False	NA	16	True	AATAAA	-20	NA	27150790	27205512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
ENSMUST00000022451.14	chr14	+	3648	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_6	22.7354348979737	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTTTAATGTCCAG	NA	False	NA	15	True	AATAAA	-20	NA	31058594	31093941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ENSMUST00000022458.11	chr14	+	3460	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_12	31.9899886683318	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	False	NA	25	True	AATAAA	-32	NA	30973406	30981901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ENSMUST00000022459.5	chr14	-	2084	11	FSM	ENSMUSG00000021902.8	ENSMUST00000022459.5	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	8.85945822271317	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGTCTCCTTGTGAATT	NA	False	NA	-3	True	AATAAA	-14	NA	30973274	30959651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30960111_30960293_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUST00000022462.14	chr14	+	2376	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGTTTAATGTTTCAG	NA	False	NA	20	True	AATACA	-19	NA	31807369	31825159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ENSMUST00000022462.14-0	chr14	+	1963	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	413	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	23.2422908000191	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGTTTAATGTTTCAG	NA	False	NA	20	True	AATACA	-19	NA	31807782	31825159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ENSMUST00000022467.11	chr12	+	1878	1	FSM	ENSMUSG00000021908.11	ENSMUST00000022467.11	1878	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAACAGACTACCAGAATC	NA	False	NA	NA	False	GATAAA	-37	NA	119224712	119226590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_119224700_119226600
ENSMUST00000022469.13	chr14	-	5559	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_8	71.9902076674321	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9321	False	NA	-4	True	AATAAA	-17	NA	30928758	30892886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUST00000022470.15	chr14	+	4413	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	0	0	0	0	multi-exon	FALSE	canonical	1	134	junction_15	83.8243756407233	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTTAGATGCTCTGA	NA	False	NA	NA	False	AATAAA	-23	NA	31923905	32019507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ENSMUST00000022471.12	chr14	+	5871	28	FSM	ENSMUSG00000042323.18	ENSMUST00000022471.12	5871	28	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_25	38.5807190094572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	3661	False	NA	NA	False	AAGAAA	-7	NA	30747466	30841977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
ENSMUST00000022476.9	chr14	+	2018	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2321823686655	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGCTTCCCCATTTT	3576	False	NA	9	True	AATAAA	-20	NA	30723406	30733948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUST00000022494.10	chr14	-	843	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	0	9249	0	-1226	multi-exon	FALSE	canonical	3	296	junction_1	24.8506650928211	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGTGTGACTTAGTAG	NA	False	NA	-5	True	ATTAAA	-18	NA	61597888	61578439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
ENSMUST00000022496.9	chr14	-	4069	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	0	0	0	0	multi-exon	TRUE	canonical	2	379	junction_16	73.5790391347971	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTGAAAGACTTATT	6546	False	NA	-12	True	AATAAA	-22	NA	61677323	61602659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ENSMUST00000022497.15	chr14	-	4002	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTACCTTACTCAAT	NA	False	NA	NA	False	NA	NA	NA	61794335	61769441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ENSMUST00000022497.15-0	chr14	-	1019	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	128	2855	0	-543	multi-exon	FALSE	canonical	3	133	junction_1	8.67467578644874	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAATTGAGTGATTAT	NA	False	NA	-7	True	TATAAA	-42	NA	61794207	61772296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ENSMUST00000022499.13	chr14	+	1494	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATAGTTTTGTTGCT	NA	False	NA	5	True	AATAAA	-17	NA	62569516	62610441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUST00000022499.13-0	chr14	+	1013	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	0	481	0	-481	multi-exon	FALSE	canonical	3	538	junction_2	112.951139879153	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUST00000022507.13	chr14	-	4114	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTGTTTTATTGGAAT	NA	False	NA	NA	False	AATAAA	-15	NA	57015773	56958166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ENSMUST00000022507.13-0	chr14	-	2383	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	0	1731	0	1545	multi-exon	FALSE	canonical	3	306	junction_8	29.8556422640679	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAAGTAAATCTCTT	NA	False	NA	0	True	AATAAA	-22	NA	57015773	56959897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ENSMUST00000022511.10	chr14	+	6974	24	FSM	ENSMUSG00000021945.10	ENSMUST00000022511.10	6974	24	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_11	25.3409267961625	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTAATGTTTTTATCT	NA	False	NA	NA	False	CATAAA	-6	NA	57125275	57200158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ENSMUST00000022517.9	chr14	-	1497	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_7	4.40778532015472	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAATCTATTTCTACAC	NA	False	NA	37	True	AATAAA	-16	NA	57635986	57512449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
ENSMUST00000022518.8	chr14	-	836	5	FSM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTCATGAGGTTGAG	NA	False	NA	-9	True	AATAAA	-19	NA	57809026	57787054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
ENSMUST00000022519.15	chr14	+	1880	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.55345522642137	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGGATTTGTGGGG	NA	False	NA	NA	False	CATAAA	-19	NA	33807937	33822528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
ENSMUST00000022521.13	chr14	-	2612	17	FSM	ENSMUSG00000021948.18	ENSMUST00000022521.13	2612	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	28.3700436199876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTGGCTGTGGGGACA	NA	False	NA	-7	True	AATAAA	-13	NA	30332259	30317314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324615_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144
ENSMUST00000022522.15	chr14	-	1881	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	0	0	0	0	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63746541	63729795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ENSMUST00000022522.15-0	chr14	-	1434	9	FSM	ENSMUSG00000021953.15	ENSMUST00000022522.15	1881	9	336	111	0	-111	multi-exon	FALSE	canonical	3	2964	junction_2	186.921733286956	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746205	63729906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
ENSMUST00000022528.6	chr14	+	1295	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	11.9443152447793	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGCCTTTCACATGA	4087	False	NA	NA	False	AATAAA	-39	NA	64097812	64157304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
ENSMUST00000022529.8	chr14	+	3223	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	0	0	0	0	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTACTGGAGGATTAGA	NA	False	NA	NA	False	NA	NA	NA	30271087	30296677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUST00000022529.8-0	chr14	+	2077	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	50	1096	0	0	multi-exon	FALSE	canonical	3	1855	junction_3	147.090520774709	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30271137	30295581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUST00000022531.14	chr14	-	5191	8	FSM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	7.14856914468389	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTCATTTGTGGTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	57983580	57927118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
ENSMUST00000022535.9	chr14	+	5576	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	16.6332999331662	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201568	30249020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ENSMUST00000022536.3	chr14	-	2260	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	28.547110186497	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063620	58044017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ENSMUST00000022538.5	chr14	+	2877	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	0	0	0	0	multi-exon	FALSE	canonical	3	956	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGCTGACCTACAAATA	NA	False	NA	NA	False	AATAAA	-12	NA	58063690	58066753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_58063780_58063965
ENSMUST00000022538.5-0	chr14	+	529	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	0	2348	0	0	multi-exon	FALSE	canonical	3	956	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTGTCTCATACGGAA	NA	False	NA	25	True	ATTAAA	-17	NA	58063690	58064405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_58063780_58063965
ENSMUST00000022543.10	chr14	-	2329	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	66.5872943480589	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTCTCTCATCCATTC	NA	False	NA	-1	True	NA	NA	NA	58236719	58153717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ENSMUST00000022544.14	chr14	-	3396	11	FSM	ENSMUSG00000021972.15	ENSMUST00000022544.14	3396	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	9.87167665596883	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTGTCCGGGATTTCT	7685	False	NA	NA	False	AATAAA	-14	NA	65187299	65049048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ENSMUST00000022550.8	chr14	-	5977	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	16.5797734872612	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGAGGTGTTTTGTTA	NA	False	NA	0	True	NA	NA	NA	65335555	65289508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
ENSMUST00000022551.14	chr14	+	3957	13	FSM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	116.922338897806	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438690	59474714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_59439034_59447191_59447260_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUST00000022553.6	chr14	+	3037	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	43.2892596379287	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTCTCATTCCTCT	NA	False	NA	5	True	AATAAA	-12	NA	59678429	59786352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUST00000022555.11	chr14	-	1500	10	FSM	ENSMUSG00000021982.15	ENSMUST00000022555.11	1500	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.9085374077363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACTTTGGGGCCCGTTCC	NA	False	NA	NA	False	NA	NA	NA	59835285	59798344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_59798371_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUST00000022563.9	chr14	+	3813	14	FSM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	13.0256915000032	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTGTTTTTCTTTT	NA	False	NA	9	True	ATTAAA	-13	NA	60502676	60539819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUST00000022573.17	chr14	+	1988	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	0	0	0	0	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACTACCCCAAATTCTT	NA	False	NA	NA	False	NA	NA	NA	74969736	74988205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUST00000022573.17-0	chr14	+	1049	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	22	917	0	0	multi-exon	FALSE	canonical	3	1089	junction_1	102.16133074701	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAATTGTTATTTT	NA	False	NA	13	True	AATAAA	-14	NA	74969758	74987288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUST00000022577.6	chr14	+	6151	19	FSM	ENSMUSG00000022000.12	ENSMUST00000022577.6	6151	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	33.0591034510565	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521812	75581866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ENSMUST00000022580.8	chr14	-	3588	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	8.56348838577675	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGGCTTACAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	76024477	75997556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
ENSMUST00000022585.5	chr14	-	5389	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	16.688013540214	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTGGAATCTTCCTTT	NA	False	NA	-9	True	AATAAA	-17	NA	76348200	76323675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ENSMUST00000022586.2	chr14	+	1682	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	0	2292	0	-2292	multi-exon	FALSE	canonical	3	441	junction_7	36.4295362461713	446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGTGTCTGTGTCATT	NA	False	NA	25	True	AATAAA	-21	NA	76348330	76372527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
ENSMUST00000022587.10	chr14	+	1762	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	40	2489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGTTTCTATATGACGC	6539	False	NA	31	True	AATAAA	-21	NA	76741917	76745205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76742282_76742688_76742738_76743856
ENSMUST00000022595.8	chr14	-	918	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	11.7046999107196	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACTTTGAAAGCTGCC	NA	False	NA	-11	True	AATAAA	-14	NA	79539085	79526195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
ENSMUST00000022597.15-1	chr14	-	3896	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	86	9241	0	-306	multi-exon	FALSE	canonical	3	151	junction_14	26.2237337258888	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCTTGTTTATATCT	NA	False	NA	-21	True	AATAAA	-12	NA	79628132	79571949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ENSMUST00000022600.4	chr14	+	1799	11	FSM	ENSMUSG00000022022.4	ENSMUST00000022600.4	1799	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	10.5683489722851	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATGTGCCTACAGAGT	NA	False	NA	1	True	AATAAA	-12	NA	79635211	79661027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_79635477_79637131_79637240_79638861_79639288_79640264_79640357_79644016_79644099_79644285_79644394_79649081_79649255_79650426_79650545_79653317_79653455_79656627_79656727_79660836
ENSMUST00000022601.7	chr14	-	3704	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTGTGTTTGTTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	79718960	79697376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUST00000022601.7-0	chr14	-	2133	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	558	1013	0	0	multi-exon	FALSE	canonical	3	326	junction_1	16.1780219761789	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCATAAAGTAAATAT	NA	False	NA	NA	False	NA	NA	NA	79718402	79698389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUST00000022609.7	chr14	-	2851	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_14	46.0192949772602	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3444	False	NA	NA	False	AATAAA	-16	NA	65830524	65767897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ENSMUST00000022610.15	chr14	+	3794	9	FSM	ENSMUSG00000022032.15	ENSMUST00000022610.15	3794	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	7.61474720525902	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGATAAGTGGTCCA	818	False	NA	NA	False	AATAAA	-19	NA	65903851	66002275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_65904196_65908005_65908124_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
ENSMUST00000022612.10	chr14	+	1720	8	FSM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_5	59.6342594316319	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	25	True	AATAAA	-41	NA	66043285	66055271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUST00000022613.10	chr14	-	2913	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_8	61.5078043828586	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6344	False	NA	-11	True	ATTAAA	-14	NA	66071443	66056486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ENSMUST00000022614.7	chr14	+	2230	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	11.4229757506527	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATTGATATCTGAATTC	NA	False	NA	31	True	AATAAA	-20	NA	66074750	66104056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ENSMUST00000022616.14	chr14	+	1810	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	2.72717802865893	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGGGTCTGTTTTTTA	NA	False	NA	13	True	AATAAA	-20	NA	66205931	66218996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
ENSMUST00000022623.13	chr14	+	3678	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_4	10.4957134107215	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTTTTTTATTGTC	NA	False	NA	31	True	NA	NA	NA	66534479	66548873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ENSMUST00000022634.9	chr14	-	3238	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	44.8508639827596	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCCATATATCATTTT	NA	False	NA	-12	True	ATTAAA	-16	NA	67246326	67222687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ENSMUST00000022638.6	chr14	-	3334	3	FSM	ENSMUSG00000022054.12	ENSMUST00000022638.6	3334	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	6.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGTGAGAGAAGTCTT	NA	False	NA	NA	False	AATAAA	-30	NA	68362295	68356731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_68358834_68360269_68360395_68361188
ENSMUST00000022639.8	chr14	+	3380	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCAGTCTTTTTTT	NA	False	NA	12	True	AATAAA	-26	NA	68321311	68326544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
ENSMUST00000022639.8-0	chr14	+	2174	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	0	1206	0	-1206	multi-exon	FALSE	canonical	3	158	junction_3	13.589211407093	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGCTGTGGTTTTTA	NA	False	NA	13	True	AATAAA	-27	NA	68321311	68325338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
ENSMUST00000022650.9	chr14	+	2797	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_8	18.7005171736119	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGTAGAGTTTTTA	NA	False	NA	15	True	AATAAA	-17	NA	99337342	99491929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ENSMUST00000022656.8	chr14	+	2726	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	51.3357124417381	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	99283812	99311976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ENSMUST00000022663.7	chr14	+	3179	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGTGTACGTGGCCCTC	NA	False	NA	4	True	NA	NA	NA	70004920	70021860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
ENSMUST00000022663.7-0	chr14	+	1846	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	13	1320	0	417	multi-exon	FALSE	canonical	0	0	junction_5	19.7556501863572	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACAGCCACTGCTGTT	NA	False	NA	NA	False	AATAAA	-26	NA	70004933	70020540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
ENSMUST00000022665.4	chr14	-	5322	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTCTTGTACTGTTT	NA	False	NA	-4	True	AATACA	-19	NA	70043085	70022438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ENSMUST00000022665.4-0	chr14	-	3117	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	0	2205	0	-2205	multi-exon	FALSE	canonical	3	83	junction_6	15.5737988261228	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTTGTCTGTATTGG	NA	False	NA	NA	False	AATAGA	-27	NA	70043085	70024643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ENSMUST00000022680.9	chr14	+	1767	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	8.98523093748847	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	70337553	70375655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
ENSMUST00000022693.9	chr14	-	3684	20	FSM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.84885979686845	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTGTGCCAGATGCTGT	8993	False	NA	NA	False	AATAAA	-20	NA	70757628	70711997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70712690_70715292_70715544_70716984_70717199_70717593_70717722_70723586_70723713_70727459_70727641_70727986_70728148_70728790_70728917_70729515_70729712_70729844_70729991_70730218_70730336_70732152_70732256_70742121_70742238_70742771_70742897_70744892_70744999_70745438_70745618_70745895_70746014_70746189_70746355_70749020_70749135_70757308
ENSMUST00000022696.8	chr14	-	4472	28	FSM	ENSMUSG00000022100.15	ENSMUST00000022696.8	4472	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	88.8509332544799	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAACATTGGATGGAGAAA	NA	False	NA	NA	False	AATAAA	-37	NA	71003994	70902257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920297_70921095_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ENSMUST00000022697.7	chr14	-	1689	5	FSM	ENSMUSG00000022101.7	ENSMUST00000022697.7	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	15.3195136998535	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGTCCGCTGAAGAAAGG	NA	False	NA	0	True	AATAAA	-16	NA	70879708	70873642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70874464_70875906_70876014_70876241_70876420_70878971_70879009_70879162
ENSMUST00000022701.7	chr14	-	4656	27	FSM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	9.67129896490844	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGATATGATCTCTG	NA	False	NA	-13	True	AATAAA	-20	NA	73563262	73432941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
ENSMUST00000022704.9	chr14	-	1796	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGGATGCTGTTTC	NA	False	NA	NA	False	AATAAA	-26	NA	73622729	73599665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ENSMUST00000022704.9-0	chr14	-	1137	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	0	659	0	0	multi-exon	FALSE	canonical	3	633	junction_1	88.6128658830082	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACCTTTCTTTTTTCTA	NA	False	NA	-19	True	ATTAAA	-25	NA	73622729	73600324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ENSMUST00000022705.7	chr14	+	1328	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_6	14.7356333046425	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTTTTTTCAATTTTT	NA	False	NA	15	True	AATAAA	-17	NA	73747464	73755985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ENSMUST00000022706.7	chr14	+	1545	12	FSM	ENSMUSG00000022110.14	ENSMUST00000022706.7	1545	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_11	475.849184386179	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTTATTCTTTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	73790205	73833223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813_73832914_73833137
ENSMUST00000022708.7	chr14	+	3075	1	FSM	ENSMUSG00000022113.7	ENSMUST00000022708.7	3075	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGACATGCTTATAT	NA	False	NA	NA	False	AATAAA	-15	NA	106343631	106346706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_106343600_106346700
ENSMUST00000022709.6	chr14	-	2087	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCTTGTTTTGTCTTA	NA	False	NA	-4	True	TATAAA	-30	NA	106134253	106129380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_106131236_106134021
ENSMUST00000022715.14	chr14	-	3633	22	FSM	ENSMUSG00000022119.16	ENSMUST00000022715.14	3633	22	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_9	46.4492994023159	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAACTACCTTCTGAT	NA	False	NA	NA	False	GATAAA	-2	NA	105414763	105352498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ENSMUST00000022716.4	chr14	-	3420	6	FSM	ENSMUSG00000022120.5	ENSMUST00000022716.4	3420	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	11.8490505948789	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTTTGATGTCATCAT	NA	False	NA	-1	True	AATAAA	-18	NA	104760068	104714971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ENSMUST00000022720.15	chr14	-	2654	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	-12	1667	0	-222	multi-exon	FALSE	canonical	3	60	junction_4	52.2894587847302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCATCTGTACAGTTTAGA	9801	False	NA	NA	False	AATAAA	-20	NA	103337002	103319341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
ENSMUST00000022721.8	chr14	+	2445	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	4.96655480858378	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTGCATCTTGTATCTT	NA	False	NA	6	True	NA	NA	NA	103307651	103315064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ENSMUST00000022727.10	chr14	-	1682	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	15.4084875183551	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTCTTTTTATTT	250	False	NA	-4	True	ATTAAA	-20	NA	118370159	118349887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ENSMUST00000022728.4	chr14	+	1875	9	FSM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	22.6463987203264	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTAGCATTTGTTTATT	NA	False	NA	5	True	AATAAA	-24	NA	118374569	118400673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ENSMUST00000022734.9	chr14	+	5141	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_10	14.8340684499182	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTACTTGCTTCTTATT	2329	False	NA	15	True	AATAAA	-17	NA	119175387	119219109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUST00000022751.15	chr15	+	1832	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	41.1430431543414	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTCCTTTTATTCTT	NA	False	NA	31	True	AGTAAA	-31	NA	5215040	5247817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUST00000022765.14	chr14	-	2906	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_5	9.75202752335772	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTGTCATTTCTGAC	NA	False	NA	1	True	ATTAAA	-27	NA	52517002	52499215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ENSMUST00000022766.8	chr14	+	3461	10	FSM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	0	1889	0	-1889	multi-exon	FALSE	canonical	3	15	junction_1	167.945390889383	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAAATGTGCATTC	NA	False	NA	8	True	AGTAAA	-20	NA	52516602	52531969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52516690_52516844_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ENSMUST00000022767.16	chr14	-	2025	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	19.5910693939866	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCTTTCCACTTAGTG	NA	False	NA	-16	True	AATAAA	-39	NA	52542585	52532297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ENSMUST00000022781.8	chr14	-	688	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	190	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_1	8	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTTCATGTTTGTG	NA	False	NA	-11	True	ATTAAA	-24	NA	54491371	54472935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54473171_54480155_54480326_54491088
ENSMUST00000022782.10	chr14	+	3011	7	FSM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	0	1217	0	537	multi-exon	TRUE	canonical	3	169	junction_1	20.8306664959782	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701593	54707737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
ENSMUST00000022784.9	chr14	-	1587	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_5	37.1423687391577	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	False	NA	-1	True	AATAAA	-20	NA	54791818	54779241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ENSMUST00000022786.6	chr14	-	2670	7	FSM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	4.10960933531265	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTGTTGGGCTTAGT	NA	False	NA	-1	True	NA	NA	NA	54843450	54821119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570_54833409_54843259
ENSMUST00000022787.8	chr14	-	4084	11	FSM	ENSMUSG00000022180.8	ENSMUST00000022787.8	4084	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	10.5375518978556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGGAGTTAATAATCAT	NA	False	NA	NA	False	AATAAA	-19	NA	55019387	54959665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54995895_54996048_54996997_54997203_55018636
ENSMUST00000022791.9	chr15	-	1565	7	FSM	ENSMUSG00000022184.9	ENSMUST00000022791.9	1565	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	2.40947204913349	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCATGGTCTCTCTTTT	NA	False	NA	NA	False	AAAACA	-20	NA	4009055	3994926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007243_4007480_4008723
ENSMUST00000022793.15	chr14	-	4735	19	FSM	ENSMUSG00000022185.20	ENSMUST00000022793.15	4735	19	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_16	154.301732625911	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	2630	False	NA	0	True	AATAAA	-25	NA	54924388	54879617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
ENSMUST00000022794.14	chr14	-	2365	13	FSM	ENSMUSG00000022185.20	ENSMUST00000022794.14	2365	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	157.658033590285	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3744	False	NA	0	True	AATAAA	-25	NA	54891152	54879617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54890670_54890736_54891136
ENSMUST00000022803.6	chr14	-	899	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	0	0	0	0	multi-exon	FALSE	canonical	3	1854	junction_2	4.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGAGTCCACAGTTATT	8624	False	NA	-17	True	AATAAA	-18	NA	54855479	54851575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54851939_54853971_54854279_54855250
ENSMUST00000022806.10	chr14	+	3509	4	FSM	ENSMUSG00000089682.11	ENSMUST00000022806.10	3509	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAACAGGGTTTTGTG	NA	False	NA	25	True	AATAAA	-29	NA	55120833	55125691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55120964_55121253_55121342_55121830_55122271_55122840
ENSMUST00000022808.14	chr14	+	1030	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	0	0	0	0	multi-exon	FALSE	canonical	3	2071	junction_6	205.041797906887	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGATATA	NA	False	NA	34	True	NA	NA	NA	55131604	55135626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUST00000022813.8	chr14	-	2705	6	FSM	ENSMUSG00000022203.8	ENSMUST00000022813.8	2705	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_2	3.32264954516723	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGTCTTCAGTTCCTG	NA	False	NA	NA	False	NA	NA	NA	55163371	55153991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158639_55162894
ENSMUST00000022815.10	chr14	+	1200	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTGCCATACAT	NA	False	NA	18	True	AATAAA	-23	NA	55252910	55261594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ENSMUST00000022815.10-0	chr14	+	1089	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	111	0	111	0	multi-exon	FALSE	canonical	3	1001	junction_1	176.552230232303	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTGCCATACAT	NA	False	NA	18	True	AATAAA	-23	NA	55253021	55261594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ENSMUST00000022816.15	chr15	-	3372	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	0	0	0	0	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTTTGTGTTATCCCA	809	False	NA	NA	False	AATAAA	-11	NA	11996144	11981424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ENSMUST00000022816.15-0	chr15	-	690	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	46	2636	0	66	multi-exon	FALSE	canonical	3	7728	junction_1	236.548620794965	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	855	False	NA	79	True	AATAAA	-22	NA	11996098	11984060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ENSMUST00000022821.8	chr14	+	1392	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	11.5987332172483	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGCGTGTTTATTTCTC	NA	False	NA	11	True	AATAAA	-26	NA	55716214	55727797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
ENSMUST00000022828.9	chr14	-	855	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	3.69966214673719	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATGTATTTATTGTGT	NA	False	NA	-5	True	AATAAA	-17	NA	55822759	55818978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
ENSMUST00000022831.5	chr14	+	3898	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTGGTGTCTTCTCTTT	NA	False	NA	NA	False	GGGGCT	-23	NA	56122403	56134238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ENSMUST00000022831.5-0	chr14	+	5865	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	27	-1994	0	0	multi-exon	FALSE	canonical	3	63	junction_2	8.07111250961459	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATGGTGGCTACTACTC	NA	False	NA	6	True	NA	NA	NA	56122430	56136232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ENSMUST00000022842.16	chr15	-	1853	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	0	0	0	0	multi-exon	FALSE	canonical	3	5476	junction_6	308.656459514458	4808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGCTTGATAGAGGAT	NA	False	NA	-3	True	AATAAA	-30	NA	31601950	31590945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ENSMUST00000022849.7-1	chr15	-	2575	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	64	1366	0	338	multi-exon	FALSE	canonical	3	2899	junction_10	215.823487548918	2702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATCAAGACCTCTGT	NA	False	NA	-12	True	AATAAA	-11	NA	11399687	11383752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ENSMUST00000022855.12	chr15	-	2664	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	0	0	0	0	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATAAGGCTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	10486033	10474864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUST00000022855.12-0	chr15	-	1262	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	0	1402	0	-1402	multi-exon	FALSE	canonical	3	2074	junction_1	190.855449147086	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTTATTCTTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	10486033	10476266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUST00000022856.15	chr15	+	1514	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	183.88039590995	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTACTGTCCTGTGTCTTT	4	True	NA	27	True	AATAAA	-32	NA	10486103	10493775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ENSMUST00000022865.17	chr15	+	4832	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	0	2087	0	-2087	multi-exon	FALSE	canonical	3	477	junction_6	48.3699585751527	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	52	False	NA	25	True	AATAAA	-26	NA	34082864	34143683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ENSMUST00000022867.5	chr15	+	1902	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_4	34.9698282650757	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGTGGCTCCGCTGACT	31	True	NA	NA	False	ATTAAA	-22	NA	34238173	34284448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ENSMUST00000022871.7	chr15	+	3527	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	11.0227038425243	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCTGTGTGAGTATTGCT	26	False	NA	NA	False	ATTAAA	-44	NA	32920868	33035081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
ENSMUST00000022875.7	chr15	+	3498	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	12.2109556553338	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTCATGCT	52	False	NA	23	True	ATTAAA	-19	NA	27466762	27594995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUST00000022881.15	chr15	+	3248	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	4.98591766879478	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	9	False	NA	21	True	TATAAA	-17	NA	25843265	25973773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ENSMUST00000022890.10	chr15	-	4277	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	15.6946165182307	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGTGCCCAGGAAT	NA	False	NA	1	True	AATAAA	-17	NA	36283293	36240078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ENSMUST00000022894.14	chr15	-	3288	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	1526.66484716049	4376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	NA	False	NA	-39	True	NA	NA	NA	36794782	36771013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ENSMUST00000022901.16	chr15	-	4561	9	FSM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	8.71779788708135	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTTATATCATTTT	7108	False	NA	NA	False	AATAAA	-16	NA	37961347	37924195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37927642_37929281_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
ENSMUST00000022904.8	chr15	+	2071	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	0	0	0	0	multi-exon	FALSE	canonical	3	1269	junction_12	107.259679697866	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTAGTCATTTATTTT	184	False	NA	31	True	AATAAA	-17	NA	38662176	38692690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUST00000022906.8	chr15	+	4081	7	FSM	ENSMUSG00000022297.16	ENSMUST00000022906.8	4081	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.28269227499025	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGATTGTATTGTGTG	NA	False	NA	NA	False	AATAAA	-12	NA	38869727	38901581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_38869885_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ENSMUST00000022908.10	chr15	-	5905	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCAATTTGGCCTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	38976111	38954625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ENSMUST00000022908.10-0	chr15	-	2354	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	0	3551	0	186	multi-exon	FALSE	canonical	3	83	junction_3	10.9392260542813	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTGCTATAATATCC	NA	False	NA	NA	False	AATAAA	-31	NA	38976111	38958176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ENSMUST00000022909.10	chr15	+	1551	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	0	0	0	0	multi-exon	FALSE	canonical	2	478	junction_2	96.4514903980234	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCAGTTGTGTGTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	38976259	39010251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUST00000022916.13	chr15	-	4109	7	FSM	ENSMUSG00000022305.14	ENSMUST00000022916.13	4109	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	6.95221787153807	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGTTGTTCTTTATTTT	NA	False	NA	-2	True	ATTAAA	-36	NA	39807184	39733984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39767934_39767992_39806999
ENSMUST00000022925.10	chr15	-	1295	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	0	0	0	0	multi-exon	FALSE	canonical	3	1820	junction_5	77.7200628104822	997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTGTATTTATGGTG	NA	False	NA	-12	True	AATAAA	-24	NA	51728919	51649953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUST00000022927.11	chr15	-	3592	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	0	364	0	-364	multi-exon	FALSE	canonical	3	565	junction_13	70.6746022859982	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51855143	51825999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ENSMUST00000022945.9	chr8	-	2156	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_9	39.0672497112351	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGTGAAATGTGGATT	NA	False	NA	-5	True	TATAAA	-15	NA	4829554	4785975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ENSMUST00000022946.6	chr15	-	1004	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	17.7245592328836	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTAATTTTGTTC	NA	False	NA	-10	True	AATAAA	-21	NA	34495401	34484166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
ENSMUST00000022952.6	chr15	+	1724	4	FSM	ENSMUSG00000022330.6	ENSMUST00000022952.6	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	10.1434160364686	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCTTGAGATTCATCT	117	False	NA	13	True	AATAAA	-16	NA	35296243	35303451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_35296614_35300334_35301102_35302057_35302158_35302964
ENSMUST00000022954.7	chr15	+	1887	9	FSM	ENSMUSG00000022332.9	ENSMUST00000022954.7	1887	9	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	27.0277635034792	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATTTTGTGTGTGTG	NA	False	NA	7	True	AATAAA	-7	NA	68800268	68965361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
ENSMUST00000022960.4	chr15	-	1506	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	0	0	0	0	multi-exon	TRUE	canonical	3	2495	junction_1	136.260065887095	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ENSMUST00000022962.8	chr15	+	1231	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_9	74.0384359640315	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAAAATTCTAGTTTC	NA	False	NA	10	True	AATAAA	-20	NA	43340624	43391159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUST00000022964.9	chr15	+	1613	7	FSM	ENSMUSG00000022339.10	ENSMUST00000022964.9	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	29.9467119322899	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTATATCCTTATT	NA	False	NA	12	True	ATTAAA	-22	NA	44482986	44504422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_44483339_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUST00000022971.8	chr15	+	2338	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAATACAATTGGGCC	NA	False	NA	NA	False	AATAAA	-7	NA	61857239	61862199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_61857801_61859355_61860128_61861194
ENSMUST00000022976.6	chr15	-	4033	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_18	44.6203943487363	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246016	59203845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ENSMUST00000022977.14	chr15	+	2758	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	53.8835782033822	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186929	59203041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ENSMUST00000022980.5	chr15	+	704	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	3	3308	junction_3	178.75557489364	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTGCCTGAAGTGT	2816	False	NA	13	True	AATAAA	-14	NA	58805604	58811337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
ENSMUST00000022992.13	chr15	+	3311	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	36.9403234961471	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGCTGAACTGTCTTC	NA	False	NA	8	True	AATAAA	-15	NA	57775594	57833457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ENSMUST00000022993.7	chr15	-	3175	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	0	0	0	0	multi-exon	TRUE	canonical	3	365	junction_5	42.5977866628236	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGATGGTATGTGAG	NA	False	NA	NA	False	NA	NA	NA	57755844	57732897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ENSMUST00000022998.14	chr15	+	3144	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_14	23.9707872097639	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGATTGCATGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	55420803	55489819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ENSMUST00000023008.16	chr15	-	4580	31	FSM	ENSMUSG00000022377.17	ENSMUST00000023008.16	4580	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	35.2123873405684	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64254768	63960389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030615_64030621_64030726_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ENSMUST00000023015.15	chr15	-	3365	4	FSM	ENSMUSG00000022382.16	ENSMUST00000023015.15	3365	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTGTGTGTGACGTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	85466022	85419641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85422070_85427869_85428142_85443107_85443331_85465580
ENSMUST00000023019.12	chr15	+	1526	11	FSM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	10.36532681588	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCATGTGTCTGGGGCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	85763520	85781593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ENSMUST00000023024.8	chr15	+	4079	4	FSM	ENSMUSG00000022389.16	ENSMUST00000023024.8	4079	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	7.84573486395988	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCCCAGCTGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	81695614	81710899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81695922_81699144_81699463_81705399_81705621_81707666
ENSMUST00000023029.15	chr15	+	3487	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_15	40.713125570877	1506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81548089	81572516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ENSMUST00000023036.7	chr15	+	1675	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	0	0	0	0	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTGTCATTTTCACC	NA	False	NA	17	True	NA	NA	NA	81350496	81360570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUST00000023036.7-0	chr15	+	519	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	48	1108	0	-125	multi-exon	FALSE	canonical	3	4160	junction_1	231.400491572512	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350544	81359462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUST00000023039.15	chr15	-	1641	12	FSM	ENSMUSG00000022403.16	ENSMUST00000023039.15	1089	12	-146	-406	-146	406	multi-exon	FALSE	canonical	0	0	junction_10	740.766712477045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283941	81249244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273898_81276465_81276524_81283685
ENSMUST00000023040.9	chr15	-	1724	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_6	19.7638400873919	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAAGTTGCTCTTGATT	6848	False	NA	-10	True	AATAAA	-27	NA	81245013	81203111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ENSMUST00000023043.10	chr15	+	1855	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	29	1827	0	0	multi-exon	FALSE	canonical	3	932	junction_8	68.052471585453	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832719	80853320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUST00000023048.12	chr15	+	5148	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	35.3361005205724	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2753	False	NA	16	True	AATAAA	-18	NA	80118218	80137572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ENSMUST00000023050.9	chr15	+	2964	11	FSM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	7.29109045342327	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCATCTTGTCTATCTG	4993	False	NA	15	True	AGTAAA	-1	NA	80017327	80045908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUST00000023055.8	chr15	-	1472	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	38.6091526281874	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	243	False	NA	NA	False	ATTAAA	-17	NA	79658668	79645653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
ENSMUST00000023059.13	chr15	-	1324	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_7	27.4268914571083	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCCTGACTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	54953887	54939494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ENSMUST00000023061.7	chr15	-	3440	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	10.9848380355227	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTCTACTTGTCTGAT	NA	False	NA	-3	True	ATTAAA	-15	NA	79572120	79558451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
ENSMUST00000023062.5	chr15	+	1569	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTGTTTTTATTGGTG	8178	False	NA	NA	False	AATAGA	-12	NA	79555061	79557601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ENSMUST00000023062.5-0	chr15	+	1011	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	20	538	0	182	multi-exon	FALSE	canonical	3	903	junction_3	55.9305124437656	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTTATTGCTGTGT	8198	False	NA	16	True	ATTAAA	-12	NA	79555081	79557063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ENSMUST00000023064.9	chr15	+	1147	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	15.1224171348366	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGTGTAGCAAAAATAG	9559	False	NA	NA	False	ATTAAA	-14	NA	79543399	79551861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
ENSMUST00000023065.8	chr15	-	2219	14	FSM	ENSMUSG00000022429.12	ENSMUST00000023065.8	2219	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	20.9451241307391	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGATTCTGCATTCA	NA	False	NA	NA	False	AGTAAA	-16	NA	79489309	79445697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79469869_79469962_79472951_79473025_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ENSMUST00000023068.8	chr15	-	4047	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_19	18.7071269098764	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016165	84948889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ENSMUST00000023069.9	chr15	+	2518	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	15.0742951742362	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	8	True	AATAAA	-15	NA	84921289	84947031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ENSMUST00000023071.8	chr15	+	1672	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	0	2957	0	-2957	multi-exon	FALSE	canonical	3	1573	junction_6	135.39963524504	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGATGTGGTCTGTTTT	NA	False	NA	34	True	AATAAA	-20	NA	84076441	84098511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ENSMUST00000023074.9	chr15	+	2619	13	FSM	ENSMUSG00000022439.10	ENSMUST00000023074.9	2619	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	5.54464205837992	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGACTTAATGACAGCC	NA	False	NA	NA	False	AATAAA	-20	NA	84208920	84227143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_84209033_84211188_84211285_84212495_84212561_84213064_84213168_84214223_84214365_84215179_84215296_84216491_84216548_84216891_84216915_84218542_84218602_84218786_84218856_84221985_84222088_84225054_84225128_84225539
ENSMUST00000023075.9	chr15	-	2402	3	FSM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCCTGGTACTTTTTGC	NA	False	NA	NA	False	AATAAA	-22	NA	78413825	78407545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78409599_78411427_78411669_78413717
ENSMUST00000023085.7	chr15	-	590	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	3916	junction_1	175	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTCTCTCTTACTT	6212	False	NA	-13	True	GATAAA	-21	NA	82238523	82234340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82234573_82235179_82235296_82238281
ENSMUST00000023085.7-0	chr15	-	475	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	85	30	0	0	multi-exon	FALSE	canonical	3	3916	junction_1	175	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAAAATTGCACTGG	6297	False	NA	-43	True	AATAAA	-20	NA	82238438	82234370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82234573_82235179_82235296_82238281
ENSMUST00000023086.15	chr15	+	705	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	0	0	0	0	multi-exon	FALSE	canonical	3	1353	junction_2	125	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGCTTGGTTGCACTTT	NA	False	NA	61	True	AATAAA	-43	NA	82230154	82233291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82230471_82232100_82232242_82233043
ENSMUST00000023086.15-0	chr15	+	551	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	123	31	0	0	multi-exon	FALSE	canonical	3	1353	junction_2	125	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGAGGTCGTCCCCAT	NA	False	NA	30	True	AATAAA	-12	NA	82230277	82233260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82230471_82232100_82232242_82233043
ENSMUST00000023087.13	chr15	-	3025	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_8	20.6333316505115	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	False	NA	-12	True	AATAAA	-12	NA	94487760	94475831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ENSMUST00000023088.8	chr15	-	1913	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	15.084944665313	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGTACTATGACCTG	1344	False	NA	0	True	AATAAA	-31	NA	82223027	82213732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ENSMUST00000023089.5	chr15	+	1413	6	FSM	ENSMUSG00000022455.5	ENSMUST00000023089.5	1413	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	3.32264954516723	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCTCCTGCCTTATT	2000	False	NA	NA	False	TTTAAA	-23	NA	82183154	82198824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82183270_82189871_82189981_82190244_82190387_82190546_82190640_82192723_82192829_82197975
ENSMUST00000023095.14	chr15	+	4992	10	FSM	ENSMUSG00000022456.19	ENSMUST00000023095.14	4992	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	5.9087714668037	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	82159439	82178775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938
ENSMUST00000023099.8	chr15	-	4660	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_15	32.8196418153655	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597611	96585272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ENSMUST00000023100.8	chr15	+	5077	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_18	78.7541886011292	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGCTGTGTGAGTCTG	2173	False	NA	25	True	AATAAA	-21	NA	82031381	82089580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ENSMUST00000023101.10	chr15	-	3932	16	FSM	ENSMUSG00000022464.15	ENSMUST00000023101.10	3932	16	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_8	94.9644143877063	2294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTATGATCTTCTTT	NA	False	NA	-12	True	AATAAA	-16	NA	96953837	96892703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
ENSMUST00000023104.7	chr15	-	2271	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_16	35.978292066189	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGTCGATATTTCATTT	NA	False	NA	-3	True	AATAAA	-25	NA	97603706	97572977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ENSMUST00000023112.12	chr15	-	1300	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_3	83.919543587405	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845131	81835308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUST00000023113.7	chr15	-	2542	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGTCATCAAAAATAAA	428	False	NA	NA	False	AATAAA	-17	NA	81810441	81799229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ENSMUST00000023113.7-0	chr15	-	1488	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	0	1054	0	318	multi-exon	FALSE	canonical	3	251	junction_5	12.0432553738597	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTCCCCTTTTCATTA	428	False	NA	-2	True	AATAAA	-17	NA	81810441	81800283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ENSMUST00000023116.7	chr15	+	2918	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	0	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_10	137.479737418618	3557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	19	True	AAAAAG	-16	NA	81756509	81799334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUST00000023117.10	chr15	-	866	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	0	797	0	152	multi-exon	FALSE	canonical	3	1228	junction_3	69.0426599204354	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAACGTCTACTTTTAG	NA	False	NA	-4	True	AATAAA	-22	NA	81756112	81749517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
ENSMUST00000023123.15	chr15	-	5104	54	FSM	ENSMUSG00000022483.18	ENSMUST00000023123.15	5104	54	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_47	3.47415827516495	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGACTTGTGTTTTGT	8055	False	NA	NA	False	ATTAAA	-31	NA	97902576	97873482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192_97895271_97896179_97896285_97896425_97896480_97896579_97896613_97896734_97896768_97897155_97897173_97898283_97898488_97902289
ENSMUST00000023128.8	chr15	-	4382	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	17.8822280065433	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAGTCTGTCCTTCCAT	NA	False	NA	2	True	AATAAA	-28	NA	103275190	103252712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ENSMUST00000023132.5	chr15	+	3218	16	FSM	ENSMUSG00000022489.7	ENSMUST00000023132.5	3218	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	5.10163372525573	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTGTGGTGTTCAT	NA	False	NA	9	True	AATAAA	-15	NA	103411460	103438479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_103411800_103411887_103412011_103428375_103428490_103429732_103429916_103430079_103430147_103430471_103430589_103432734_103432876_103433224_103433326_103433416_103433543_103433662_103433765_103434689_103434811_103435033_103435116_103435410_103435520_103435971_103436103_103436648_103436772_103437240
ENSMUST00000023133.8	chr15	-	1306	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTTCACCCCCTTTTC	2052	False	NA	NA	False	ATTAAA	-21	NA	103446430	103438705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
ENSMUST00000023133.8-0	chr15	-	745	7	FSM	ENSMUSG00000022490.8	ENSMUST00000023133.8	1306	7	0	561	0	-146	multi-exon	FALSE	canonical	3	176	junction_5	12.4688500761787	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGCTTTTCTTCTTTC	2052	False	NA	-38	True	GATAAA	-15	NA	103446430	103439266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103439377_103439780_103439888_103440752_103440909_103441464_103441529_103441883_103441922_103442776_103442838_103446221
ENSMUST00000023143.14	chr16	-	2235	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTCCCCATTCATTCT	NA	False	NA	-11	True	AATAAA	-13	NA	10810985	10777138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ENSMUST00000023143.14-0	chr16	-	1969	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	50	216	0	-216	multi-exon	FALSE	canonical	3	313	junction_3	22.4548930574657	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGCCTTGTGTTGTGTT	NA	False	NA	17	True	AATAAA	-44	NA	10810935	10777354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ENSMUST00000023146.5	chr16	+	2121	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCTTTGTCATTCTTTC	NA	False	NA	NA	False	AAGAAA	-25	NA	10229811	10242292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUST00000023146.5-0	chr16	+	1223	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	0	898	0	184	multi-exon	FALSE	canonical	3	699	junction_1	76.2262422004391	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTAGGGCCTGCTTCC	NA	False	NA	16	True	AATAAA	-18	NA	10229811	10241394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUST00000023150.7	chr16	+	4072	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	16.3299316185545	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGGGGCTTGTCTGTA	9944	False	NA	10	True	AATAAA	-21	NA	8647963	8676786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ENSMUST00000023156.13	chr16	+	4520	11	FSM	ENSMUSG00000022514.15	ENSMUST00000023156.13	4520	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	6.68505796534331	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTGCATGTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	26400506	26536494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ENSMUST00000023157.6	chr16	-	2398	17	FSM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	12.8608842522589	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8223	False	NA	-5	True	AATAAA	-13	NA	4782037	4759299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ENSMUST00000023159.10	chr16	+	3095	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	0	0	0	0	multi-exon	TRUE	canonical	3	266	junction_15	54.4223810169636	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTATGTGTGCCTTTGTT	2924	False	NA	13	True	AATAAA	-14	NA	4704112	4756159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUST00000023165.9	chr16	-	6550	31	FSM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	0	4270	0	1012	multi-exon	FALSE	canonical	3	32	junction_30	8.09416799649943	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGGACTCAGCCCCCAACA	6012	False	NA	NA	False	NA	NA	NA	4031861	3903461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ENSMUST00000023171.8	chr16	+	1468	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_2	50.3388517946129	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	False	NA	16	True	AATAAA	-17	NA	29884157	29886614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
ENSMUST00000023176.5	chr16	+	3241	6	FSM	ENSMUSG00000022529.12	ENSMUST00000023176.5	3241	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	57.158026557956	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATGAATATGTATAAAT	NA	False	NA	3	True	AATAAA	-12	NA	3561956	3568645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3562632_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
ENSMUST00000023179.7	chr15	+	2772	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	13.4976849866931	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	76763458	76776595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
ENSMUST00000023189.15	chr16	-	3280	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	221.604291976086	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8110	False	NA	-8	True	AATAAA	-13	NA	4867727	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ENSMUST00000023206.14	chr16	+	3480	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	21.466252583998	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	11	True	AATAAA	-14	NA	12927547	12966598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ENSMUST00000023207.15	chr16	-	979	5	FSM	ENSMUSG00000022548.15	ENSMUST00000023207.15	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	27.2614654778499	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTTGCTAGCCCAATAAT	8710	False	NA	-38	True	NA	NA	NA	31133412	31115973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216
ENSMUST00000023210.8	chr15	+	1520	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCATGGTGTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	76227722	76230460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ENSMUST00000023210.8-0	chr15	+	1182	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	10	328	0	0	multi-exon	FALSE	canonical	3	4240	junction_5	258.32822575596	2454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACATTTTAGCTGGTCA	NA	False	NA	25	True	AATAAA	-15	NA	76227732	76230132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ENSMUST00000023211.16	chr15	-	1734	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTTCTGTTCTTGGA	8113	False	NA	-3	True	ATTAAA	-16	NA	76235311	76231239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ENSMUST00000023211.16-0	chr15	-	1334	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	399	1	0	0	multi-exon	FALSE	canonical	3	126	junction_7	14.1862609591111	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8512	False	NA	-4	True	ATTAAA	-15	NA	76234912	76231240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ENSMUST00000023212.15	chr15	+	1686	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	86.5157765487702	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235505	76238573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUST00000023213.8	chr15	+	1993	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	14.4858551697855	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACTCTCCTGCAAGAG	3544	False	NA	NA	False	NA	NA	NA	76253097	76255637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ENSMUST00000023214.11	chr15	-	1888	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_16	22.0368122411115	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396151	76386214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ENSMUST00000023217.11	chr15	-	2491	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_11	43.9047453775405	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTGGCAGCAGAGT	NA	False	NA	-34	True	AATAAA	-20	NA	76361477	76337188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ENSMUST00000023219.9	chr15	-	1710	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_8	22.8988946239769	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTATATGT	NA	False	NA	NA	False	AATAAA	-21	NA	76422935	76419920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
ENSMUST00000023220.10	chr15	+	2094	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	0	3195	0	-717	multi-exon	FALSE	canonical	3	110	junction_4	5.2618912949623	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTATGCCAGGCCTCCT	NA	False	NA	28	True	AATAAA	-38	NA	76423031	76425613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
ENSMUST00000023221.13	chr15	+	2107	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	0	0	0	0	multi-exon	TRUE	non_canonical	3	197	junction_6	31.5777932223483	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	4713	False	NA	24	True	AATAAA	-27	NA	76215430	76219107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUST00000023222.13	chr15	-	3970	27	FSM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_11	7.05305339056621	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTATTGGGTTATTGGGC	9183	False	NA	-19	True	AATAAA	-17	NA	76191445	76180802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
ENSMUST00000023225.8	chr15	+	1725	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	10.0567832276971	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGCTTCTCCTTGTCT	NA	False	NA	13	True	AATAAA	-14	NA	76130974	76134104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ENSMUST00000023231.7	chr15	-	1335	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_10	87.2147349935778	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGACTCAGAAGCTGGG	8919	False	NA	-29	True	AATAAA	-15	NA	75801602	75796531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ENSMUST00000023235.13	chr15	-	824	7	FSM	ENSMUSG00000055762.17	ENSMUST00000023235.13	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_6	1073.10918984665	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGTGGTGGAGGATGA	NA	False	NA	NA	False	NA	NA	NA	75781178	75767652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773102_75781093
ENSMUST00000023237.8	chr15	-	1696	13	FSM	ENSMUSG00000022574.8	ENSMUST00000023237.8	1898	13	191	11	0	0	multi-exon	FALSE	canonical	3	20	junction_8	7.1351049201972	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTGTCAGCCATGTGT	NA	False	NA	NA	False	CATAAA	-19	NA	75766139	75762815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75762910_75762997_75763106_75763195_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
ENSMUST00000023238.6	chr15	+	1792	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	7.7614431647729	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTTGAGGGGTACTG	NA	False	NA	15	True	AATAAA	-20	NA	75734175	75739257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ENSMUST00000023248.13	chr15	-	819	3	FSM	ENSMUSG00000075602.11	ENSMUST00000023248.13	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	8	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	9905	False	NA	-4	True	AATAAA	-15	NA	74869483	74866726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_74867329_74868300_74868418_74869383
ENSMUST00000023268.14	chr15	-	3055	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	11.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544417	74540931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_74541843_74542028_74542169_74542413
ENSMUST00000023269.5	chr16	+	677	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	9815	junction_1	1495.09793659145	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786637	55791798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ENSMUST00000023270.14	chr16	-	7911	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_5	7.29383301152419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGATATCTGGTTATT	NA	False	NA	-1	True	AATAAA	-15	NA	55755218	55720250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ENSMUST00000023270.14-0	chr16	-	5515	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	22	2374	0	-2374	multi-exon	FALSE	canonical	3	23	junction_5	7.29383301152419	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGTCATACCCTGTGAAAA	NA	False	NA	NA	False	NA	NA	NA	55755196	55722624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ENSMUST00000023276.16	chr15	-	3301	22	FSM	ENSMUSG00000047921.18	ENSMUST00000023276.16	3301	22	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	55.8945800738556	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	2543	False	NA	-1	True	AATAAA	-21	NA	72927659	72461468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_72462012_72462464_72462689_72557131_72557223_72565352_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72927596
ENSMUST00000023283.6	chr15	-	2906	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	66.7675469479281	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGCGGTGTGGCGAG	NA	False	NA	NA	False	AATAAA	-19	NA	89239862	89235206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ENSMUST00000023289.13	chr15	-	1707	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1180	False	NA	NA	False	AATAAA	-23	NA	89314102	89310569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ENSMUST00000023289.13-0	chr15	-	1238	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	469	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	79.2225346729073	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1649	False	NA	NA	False	AATAAA	-23	NA	89313633	89310569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ENSMUST00000023291.6	chr15	+	5558	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTTGCTTATCTCAGT	1258	False	NA	11	True	AATAAA	-18	NA	89338115	89348671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ENSMUST00000023291.6-0	chr15	+	3241	12	FSM	ENSMUSG00000022619.6	ENSMUST00000023291.6	5558	12	293	2024	293	-2024	multi-exon	FALSE	canonical	3	60	junction_1	12.5005784990103	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTGGCTGTTTTTAAG	1551	False	NA	13	True	AATAAA	-13	NA	89338408	89346647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89338489_89339386_89339493_89340727_89341007_89341122_89341220_89341337_89342574_89342944_89343021_89343118_89343292_89343384_89343495_89344578_89344687_89344854_89344926_89345562_89345662_89345841
ENSMUST00000023294.15	chr15	-	1640	9	FSM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	5.95818764390649	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAAGGGTCTCAGTTACC	-11	True	NA	-4	True	AATAAA	-17	NA	89476126	89466735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
ENSMUST00000023330.8	chr16	+	3045	27	FSM	ENSMUSG00000022652.8	ENSMUST00000023330.8	3045	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	334.347850609362	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	NA	False	NA	11	True	AATAAA	-16	NA	48251599	48451263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
ENSMUST00000023334.15	chr16	-	3062	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	19.3328735577513	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAGATTTTTGGGGGTT	NA	False	NA	-7	True	ATTAAA	-13	NA	46317330	46267531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ENSMUST00000023343.4	chr16	+	1413	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	0	644	0	0	multi-exon	FALSE	canonical	3	353	junction_3	33.1011472673263	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTATTTGTTTAATAAAA	NA	False	NA	-13	True	AATAAA	-17	NA	44979147	45008257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUST00000023344.10	chr16	-	2944	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	51	1238	0	1135	multi-exon	FALSE	canonical	3	47	junction_3	4.7404875511093	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTGTACTATGTC	NA	False	NA	-11	True	ATTAAA	-19	NA	44979018	44961173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ENSMUST00000023351.11	chr16	-	1035	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	21	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGAGTCCTGGTTT	NA	False	NA	-2	True	ATTAAA	-22	NA	15681211	15666304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_15666594_15680261_15680408_15680611
ENSMUST00000023352.9	chr16	+	12647	86	FSM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_36	18.5618353107608	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCCTTGTTTCAAAGAA	3525	False	NA	20	True	AATAAA	-16	NA	15455752	15660099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ENSMUST00000023353.4	chr16	-	3589	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	0	0	0	0	multi-exon	TRUE	canonical	3	1276	junction_6	130.715909088714	2735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAGTAGGCATTAATG	NA	False	NA	NA	False	AATAAA	-20	NA	15455264	15441760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ENSMUST00000023357.14	chr16	-	1465	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	-4	True	NA	NA	NA	14135239	14117107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ENSMUST00000023357.14-0	chr16	-	1053	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	31	381	0	-183	multi-exon	FALSE	canonical	3	293	junction_3	56.7384349449295	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAAGTTTGATTTTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	14135208	14117488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ENSMUST00000023359.13	chr16	+	2287	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_8	30.8696857774743	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTGCATTGTATAT	NA	False	NA	96	True	AATAAA	-18	NA	13981138	14010792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUST00000023360.14	chr16	+	3087	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGAACTCTCAGCTCC	491	False	NA	NA	False	NA	NA	NA	13758528	13767242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ENSMUST00000023360.14-0	chr16	+	2254	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	37	796	0	0	multi-exon	FALSE	canonical	3	154	junction_1	20.3960780543711	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGATTTGGGTATTGTCA	528	False	NA	9	True	NA	NA	NA	13758565	13766446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ENSMUST00000023361.12	chr16	-	4228	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_1	25.0911382243075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTCTAGCTTCTACC	9988	False	NA	NA	False	NA	NA	NA	13720991	13651011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUST00000023361.12-0	chr16	-	3225	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	-4	1007	0	0	multi-exon	FALSE	canonical	3	113	junction_1	25.0911382243075	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTGCTGTTTGTC	9984	False	NA	-12	True	NA	NA	NA	13720995	13652018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUST00000023362.15	chr16	+	1175	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	69.8729004852541	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAGATGACTTTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	13637114	13653315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUST00000023363.8	chr16	+	3582	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_12	92.1558406284578	2265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	False	NA	27	True	AATAAA	-20	NA	13598576	13632703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUST00000023364.7	chr16	-	938	4	FSM	ENSMUSG00000022683.14	ENSMUST00000023364.7	1423	4	487	-2	-53	0	multi-exon	FALSE	canonical	3	37	junction_3	8.17856276425687	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGTAAGAGGTAAAT	NA	False	NA	0	True	AATAAA	-20	NA	13548360	13532920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_13533461_13542972_13543080_13545826_13545978_13548220
ENSMUST00000023365.13	chr16	+	3003	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	10.7760126660835	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTATAGAGAAATCTGAT	NA	False	NA	NA	False	AATAAA	-24	NA	13489721	13521476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ENSMUST00000023387.14	chr16	-	2838	8	FSM	ENSMUSG00000022704.17	ENSMUST00000023387.14	2838	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	53.7818723727463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710048	43681769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ENSMUST00000023391.16	chr16	-	1280	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCGTTTATTTTAATC	NA	False	NA	-7	True	AATAAA	-15	NA	18695612	18690767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUST00000023391.16-1	chr16	-	957	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	323	0	0	0	multi-exon	FALSE	canonical	3	1642	junction_3	87.6711025493704	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCGTTTATTTTAATC	NA	False	NA	-7	True	AATAAA	-15	NA	18695289	18690767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUST00000023393.15	chr16	+	2846	17	FSM	ENSMUSG00000022707.17	ENSMUST00000023393.15	2846	17	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_14	11.548132965982	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTAATGTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	70110974	70366604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325896_70357904_70357906_70357909_70358030_70365876
ENSMUST00000023396.10	chr16	+	1842	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	22.2528088114737	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTGTGGCCGAATCAT	NA	False	NA	17	True	AATAAA	-24	NA	8455537	8475395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUST00000023405.16	chr16	-	1317	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	0	379	0	0	multi-exon	FALSE	canonical	3	88	junction_5	9.94064014692275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACTAGAGTGTTCTG	NA	False	NA	NA	False	AATAAA	-10	NA	59459530	59433690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUST00000023407.12	chr16	+	2159	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_9	29.2042614850793	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGCCGGTATATACATG	NA	False	NA	-44	True	NA	NA	NA	59292137	59312824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ENSMUST00000023426.12	chr16	+	2147	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	33.101170674162	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGAGATCACAACATG	NA	False	NA	24	True	AATAAA	-31	NA	58548272	58554614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUST00000023431.8	chr16	-	3690	18	FSM	ENSMUSG00000022749.9	ENSMUST00000023431.8	3690	18	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_12	18.4520326427881	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051867	56989224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ENSMUST00000023432.10	chr16	-	1286	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	0	0	0	0	multi-exon	TRUE	canonical	3	674	junction_8	39.9499687108764	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGATGTTTTTCTTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	56987695	56977027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUST00000023432.10-0	chr16	-	1056	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	-9	239	0	-99	multi-exon	FALSE	canonical	3	674	junction_8	39.9499687108764	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGGTAACAATGTTC	NA	False	NA	-28	True	ATTAAA	-21	NA	56987704	56977266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUST00000023435.6	chr16	-	1598	6	FSM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	0	1103	0	226	multi-exon	FALSE	canonical	1	3	junction_5	1.32664991614216	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCATTTTTTTTTTCTTA	6302	False	NA	NA	False	AATAAA	-34	NA	56706529	56626626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750_56643958_56646028_56646222_56706175
ENSMUST00000023444.11	chr16	+	3394	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	0	0	0	0	multi-exon	FALSE	canonical	2	77	junction_5	14.8690113995518	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTCTCCGAGTCTTCT	NA	False	NA	32	True	NA	NA	NA	17326551	17344197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUST00000023448.15	chr16	+	2688	21	FSM	ENSMUSG00000022763.19	ENSMUST00000023448.15	2688	21	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	2.45916652547159	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCCTAGTGTAATTGG	4248	False	NA	NA	False	ATTAAA	-19	NA	17307526	17325349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17307756_17309156_17309348_17309784_17309968_17317411_17317626_17317864_17317975_17318152_17318263_17318353_17318399_17318610_17318708_17318789_17318903_17319316_17319404_17319954_17320047_17320129_17320261_17320359_17320476_17320576_17320649_17320757_17320822_17321329_17321407_17321507_17321626_17322781_17322881_17323547_17323624_17324093_17324199_17324990
ENSMUST00000023449.11	chr16	+	3447	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTGACTAAGCCCCT	1384	False	NA	NA	False	AGTAAA	-15	NA	17223849	17248691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ENSMUST00000023449.11-0	chr16	+	1946	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	0	1501	0	-1501	multi-exon	FALSE	canonical	3	88	junction_2	7.59522876548166	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACACCTGACTATCTT	1384	False	NA	NA	False	AATAAA	-13	NA	17223849	17247190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ENSMUST00000023453.10	chr16	-	1108	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_1	37.5	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGTGCATGAGATGTG	NA	False	NA	-10	True	AATAAA	-18	NA	16950247	16948001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16948653_16949460_16949658_16949987
ENSMUST00000023454.12	chr16	+	3725	25	FSM	ENSMUSG00000022770.18	ENSMUST00000023454.12	3725	25	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_17	99.2697993125581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTGTAACTATGGGAA	NA	False	NA	NA	False	NA	NA	NA	31482967	31691502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUST00000023455.14	chr16	-	2333	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCGTTCATGACCTGGTA	NA	False	NA	NA	False	AATAAA	-19	NA	16929121	16904418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUST00000023455.14-0	chr16	-	2213	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	0	120	0	-119	multi-exon	FALSE	canonical	3	214	junction_1	124.441592725262	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929121	16904538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUST00000023457.13	chr16	-	3370	10	FSM	ENSMUSG00000022772.13	ENSMUST00000023457.13	3370	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	18.3168275866621	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGGATTTTTTTTTC	NA	False	NA	NA	False	CATAAA	-22	NA	31821981	31781323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821813
ENSMUST00000023460.7	chr16	+	2070	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	12.2565175405668	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGTCTATTTCCTCGC	NA	False	NA	4	True	AATAAA	-15	NA	31767330	31777290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ENSMUST00000023464.6	chr16	+	4133	16	FSM	ENSMUSG00000022780.6	ENSMUST00000023464.6	4133	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	1.29957257930786	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGCCACCTGACTCAA	1725	False	NA	NA	False	AATAAA	-45	NA	31697627	31717838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31697794_31698940_31699096_31700685_31700786_31702578_31702762_31703761_31703919_31705017_31705086_31706229_31706418_31706927_31707109_31707695_31707848_31709533_31709631_31710384_31710580_31711303_31711461_31711557_31711626_31713508_31713697_31715246_31715446_31715959
ENSMUST00000023465.16	chr16	+	3073	18	FSM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	94.325542449951	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688644	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUST00000023467.9	chr16	-	5741	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAATTTCCATTTTTGTC	NA	False	NA	-10	True	AATAAA	-22	NA	31898160	31835107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ENSMUST00000023467.9-0	chr16	-	4160	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	0	1581	0	-1581	multi-exon	FALSE	canonical	3	184	junction_8	23.9404021925877	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAATTGTATGAATTG	NA	False	NA	-6	True	ATTAAA	-18	NA	31898160	31836688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ENSMUST00000023468.6	chr16	-	2416	11	FSM	ENSMUSG00000022783.12	ENSMUST00000023468.6	2416	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.24722050542442	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGAATGGTCCCTTTTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	16647177	16570879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16571742_16580885_16581032_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360_16610528_16646883_16646980_16647058
ENSMUST00000023474.4	chr16	+	1394	3	FSM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	52	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAATTTTGGTTTTTTTT	NA	False	NA	18	True	AATAAA	-19	NA	32066070	32075901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32066344_32070640_32071137_32075276
ENSMUST00000023477.15	chr16	-	3951	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_4	261.707977990631	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTGATGTGCTTC	NA	False	NA	-7	True	AATAAA	-29	NA	16176823	16130093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUST00000023482.13	chr16	+	2304	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	6.0184900284226	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTACTGCTTTTGCAG	3912	False	NA	NA	False	NA	NA	NA	38562625	38589411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
ENSMUST00000023486.15	chr16	+	4890	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_9	25.3592094942417	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCGGACTCATTTCATA	7957	False	NA	18	True	AATAAA	-19	NA	32427737	32451612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ENSMUST00000023489.11	chr16	+	4312	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAGAATTCCATATAT	NA	False	NA	NA	False	ATTAAA	-14	NA	32698150	32729245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUST00000023489.11-0	chr16	+	3437	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	32	843	0	-843	multi-exon	FALSE	canonical	3	485	junction_4	65.3632876697615	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTATTCTGAGCTATAA	NA	False	NA	-5	True	AATAAA	-18	NA	32698182	32728402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUST00000023491.13	chr16	+	5536	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_20	10.2853050513828	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTTTTCTTGCCAGAG	NA	False	NA	16	True	AATAAA	-25	NA	32734469	32836017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ENSMUST00000023497.3	chr16	+	6147	17	FSM	ENSMUSG00000022802.3	ENSMUST00000023497.3	6147	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	4.16645832812474	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAGCTTGTCTTTACCT	4779	False	NA	NA	False	AATAAA	-14	NA	32882890	32948065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32883105_32886680_32886779_32887655_32887687_32889410_32889494_32890250_32890369_32894374_32894554_32901300_32901407_32903388_32903484_32908471_32908590_32909634_32909743_32911655_32911733_32917270_32917382_32925078_32925212_32927383_32927544_32930147_32930279_32937370_32937582_32943891
ENSMUST00000023502.6-1	chr16	+	2459	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	-2	704	0	0	multi-exon	FALSE	canonical	3	473	junction_8	41.4737387501677	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTATTATTTTAAGAT	9281	False	NA	26	True	AATAAA	-26	NA	33071811	33119935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUST00000023507.13	chr16	+	2386	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	522	5395	522	-90	multi-exon	FALSE	canonical	3	30	junction_5	7.11407056473296	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTCATTTTAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	37909884	38061051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
ENSMUST00000023509.5	chr16	+	4396	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	32	3744	0	-3744	multi-exon	FALSE	canonical	3	70	junction_2	11.8562822407122	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTTGTCTGTTGTAA	NA	False	NA	NA	False	AGTAAA	-11	NA	19916323	19944227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ENSMUST00000023510.7	chr16	-	3484	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGTCTCCTGCCTCT	8640	False	NA	NA	False	NA	NA	NA	33787408	33775151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ENSMUST00000023510.7-0	chr16	-	1634	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	35	1815	0	-1803	multi-exon	FALSE	canonical	3	1087	junction_1	75.962095811003	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGACTGGTATTTGTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ENSMUST00000023514.4	chr16	-	540	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	0	431	0	0	multi-exon	FALSE	canonical	3	6062	junction_1	348	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTCTTTTTCTTGGAT	NA	False	NA	-2	True	AATAAA	-23	NA	37474815	37467962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_37468082_37469375_37469523_37474541
ENSMUST00000023524.13	chr16	+	2031	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	11.0896163971859	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGTCATTTCTTTTAA	NA	False	NA	NA	False	ATTAAA	-20	NA	37360246	37392747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
ENSMUST00000023525.9	chr16	-	3084	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	13.7204227340122	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	False	NA	NA	False	AATAAA	-36	NA	37360151	37330151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
ENSMUST00000023532.7	chr16	+	4107	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGAATTTGTTTACT	NA	False	NA	7	True	AATATA	-16	NA	34510985	34545564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUST00000023535.4	chr16	+	2257	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_14	52.2779073016196	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	False	NA	44	True	AATAAA	-11	NA	36648769	36693075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ENSMUST00000023550.9	chr16	-	1809	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	56.9566378374812	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGTAGAGTATGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	35311243	35217681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ENSMUST00000023554.9	chr16	-	2090	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	0	3305	0	181	multi-exon	FALSE	canonical	3	128	junction_5	11.439378261077	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTTGGAAGCCTTTCAC	NA	False	NA	1	True	AATAAA	-31	NA	35589726	35517736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
ENSMUST00000023555.6	chr16	+	1684	9	FSM	ENSMUSG00000022849.6	ENSMUST00000023555.6	4680	9	-32	3028	0	-99	multi-exon	TRUE	canonical	3	10	junction_4	251.189669373563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATATACGTGTATATTT	5404	False	NA	8	True	AATATA	-14	NA	35590744	35645819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35634699_35634780_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ENSMUST00000023559.7	chr16	-	2981	7	FSM	ENSMUSG00000022853.8	ENSMUST00000023559.7	2981	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	3.35410196624968	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTGTGTAAAAAACTG	NA	False	NA	NA	False	AATAAA	-19	NA	21606557	21580036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21582087_21584975_21585318_21589165_21589271_21592244_21592357_21594094_21594262_21596548_21596653_21606456
ENSMUST00000023561.8	chr16	+	4499	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTGCTTTATGCTTGT	2202	False	NA	35	True	AGTAAA	-42	NA	21828233	21868019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUST00000023561.8-0	chr16	+	3083	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	28	1388	0	0	multi-exon	FALSE	canonical	3	339	junction_11	50.6099900587819	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2230	False	NA	22	True	AATAAA	-22	NA	21828261	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUST00000023562.9	chr16	-	1360	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	14.1244468918255	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCAGGTTCTGAATGT	9190	False	NA	-2	True	ATTAAA	-16	NA	21766302	21753075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
ENSMUST00000023564.10	chr16	-	1369	8	FSM	ENSMUSG00000022858.17	ENSMUST00000023564.10	1369	8	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_5	318.920244652138	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCAATGCTTAACCAGA	2118	False	NA	-6	True	AATAAA	-28	NA	22073997	22065197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733
ENSMUST00000023570.14	chr16	-	1414	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_4	83.7895429036345	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTTTGTTCTGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	78173698	78156747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
ENSMUST00000023572.15	chr16	+	5742	7	FSM	ENSMUSG00000022865.15	ENSMUST00000023572.15	5742	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	8.97527467855751	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGGTGTGGCTTTATT	NA	False	NA	20	True	AATAAA	-21	NA	78098383	78137648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075
ENSMUST00000023580.8	chr16	+	4776	24	FSM	ENSMUSG00000022867.12	ENSMUST00000023580.8	4776	24	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_20	12.0225056756949	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTGTCTATTGCTTC	NA	False	NA	NA	False	AGTAAA	-12	NA	76810593	76913668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ENSMUST00000023587.12	chr16	+	1544	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	202.97702694982	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGCTTCAACCTG	NA	False	NA	9	True	AATAAA	-15	NA	22738986	22758502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000023598.15	chr16	-	1228	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	0	0	0	0	multi-exon	FALSE	canonical	2	1237	junction_10	165.436271718145	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATATACAATTTTATTTA	NA	False	NA	-26	True	AATAAA	-23	NA	22946487	22932692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUST00000023599.13	chr16	+	2208	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	0	0	0	0	multi-exon	FALSE	canonical	3	1278	junction_10	308.304135554488	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	5739	False	NA	NA	False	AATAAA	-18	NA	22926193	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000023601.14	chr16	+	4506	8	FSM	ENSMUSG00000022885.17	ENSMUST00000023601.14	4506	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.46410161513775	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGCTTCTCTTTATAC	NA	False	NA	NA	False	AATAAA	-16	NA	23043489	23179098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_23043980_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
ENSMUST00000023608.14	chr16	-	809	5	FSM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	2792.56360715383	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84632513	84624758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696_84631872_84632308
ENSMUST00000023612.17	chr16	+	3890	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	14.5890200552621	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTGTAATGTTGGATT	NA	False	NA	21	True	AATAAA	-21	NA	95502941	95522095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUST00000023615.7	chr16	-	2547	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_4	18.1490428150369	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGACTGCATATTGT	NA	False	NA	-13	True	AATAAA	-23	NA	94327689	94298641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ENSMUST00000023617.13	chr16	+	3042	8	FSM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	99.4786409235671	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAGAAAAAAAAAAAAAA	NA	False	NA	69	True	NA	NA	NA	36514339	36547166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
ENSMUST00000023629.9	chr16	+	3303	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	24.011476847711	528	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGCAATTTCTTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	62674669	62749709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ENSMUST00000023630.16	chr16	-	1044	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_3	73.0062782688357	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAACTTTATTTTCTTAA	NA	False	NA	-10	True	AATAAA	-16	NA	95792160	95781132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ENSMUST00000023655.13	chr16	-	3385	15	FSM	ENSMUSG00000000386.17	ENSMUST00000023655.13	3385	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.65729646253404	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGCATGATTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	97264106	97248236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97249573_97251567_97251826_97252674_97252750_97252798_97252947_97253161_97253300_97253388_97253453_97253643_97253698_97253962_97254052_97255224_97255424_97256289_97256429_97256688_97256844_97257421_97257560_97258499_97258693_97261955_97262147_97263898
ENSMUST00000023660.9	chr16	+	1531	4	FSM	ENSMUSG00000022941.9	ENSMUST00000023660.9	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1.63299316185545	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACAATCATCTTTTT	NA	False	NA	7	True	AATAAA	-15	NA	94129278	94137794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_94129457_94130204_94130281_94134114_94134183_94136585
ENSMUST00000023666.11	chr16	+	1922	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_1	52.2487224157954	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4366	False	NA	21	True	AATAAA	-29	NA	93680788	93703003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUST00000023669.14	chr16	-	1816	12	FSM	ENSMUSG00000022948.17	ENSMUST00000023669.14	1816	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	42.1206452981264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGTCTTAGTCG	NA	False	NA	-1	True	AATAAA	-21	NA	93400691	93380344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400024_93400099_93400453
ENSMUST00000023672.10	chr16	-	2190	4	FSM	ENSMUSG00000022951.17	ENSMUST00000023672.10	2190	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	123.764112551077	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	92196965	92188842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92196783
ENSMUST00000023677.10	chr16	-	838	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	0	0	0	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGGAGCCTTGTCCTTT	811	False	NA	-1	True	AATAAA	-20	NA	91728575	91722101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ENSMUST00000023677.10-0	chr16	-	695	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	136	7	0	0	multi-exon	FALSE	canonical	3	5653	junction_6	394.832348387684	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGGGCGTGAGGAGCCTT	947	False	NA	-8	True	AATAAA	-13	NA	91728439	91722108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ENSMUST00000023682.12	chr16	-	2365	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	21.061344850545	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGGGTAAGAAACAAAT	NA	False	NA	-1	True	AATAAA	-19	NA	91485658	91476152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ENSMUST00000023684.14	chr16	-	3300	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	0	218	0	0	multi-exon	FALSE	canonical	3	1247	junction_21	231.829967404665	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443840	91418291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUST00000023686.15	chr16	-	2347	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	6.43989302878722	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAATCTGAGTCTTTT	NA	False	NA	-6	True	AATAAA	-24	NA	91394688	91371390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ENSMUST00000023687.9	chr16	+	2092	7	FSM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	0	1616	0	-1162	multi-exon	FALSE	canonical	3	18	junction_6	4.14996653266291	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATCTAAACTTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	91343959	91360895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91344121_91351835_91351969_91354772_91354967_91356864_91357014_91357432_91357593_91358507_91358666_91359758
ENSMUST00000023689.11	chr16	+	3909	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	11.4908659377786	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATATTTTCTTTATTTA	NA	False	NA	24	True	NA	NA	NA	91282125	91304329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ENSMUST00000023691.12	chr16	+	1850	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1.63299316185545	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGGTTTGTTCTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	91203122	91222722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
ENSMUST00000023694.11	chr16	-	1142	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	288	0	0	0	multi-exon	FALSE	canonical	3	724	junction_4	16.7994708911389	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGTGTCATGAGAGC	NA	False	NA	2	True	NA	NA	NA	90731714	90722696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ENSMUST00000023698.12	chr16	-	2732	18	FSM	ENSMUSG00000022974.13	ENSMUST00000023698.12	2732	18	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_10	93.9504028766883	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAATGAAAGGAACTCAG	NA	False	NA	7	True	AATACA	-41	NA	90841052	90811803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ENSMUST00000023707.11	chr16	+	641	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	320.427351360648	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGTGTGACTCCTTTG	NA	False	NA	19	True	ATTAAA	-18	NA	90017641	90023217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
ENSMUST00000023727.17	chr15	-	2311	10	FSM	ENSMUSG00000022992.18	ENSMUST00000023727.17	2311	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	382.650535212961	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432125	98416701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426907_98427166_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUST00000023736.10	chr15	-	2304	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	10.4395581803063	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTGTCCCTGTGTCTAT	NA	False	NA	-3	True	AATAAA	-35	NA	98816112	98801797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
ENSMUST00000023745.13	chr15	+	2619	25	FSM	ENSMUSG00000023007.16	ENSMUST00000023745.13	2619	25	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_20	25.2495530763528	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGAGAGGCGAAGGCG	NA	False	NA	NA	False	NA	NA	NA	99201163	99214380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ENSMUST00000023747.14	chr15	-	4853	13	FSM	ENSMUSG00000023009.15	ENSMUST00000023747.14	4853	13	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_6	8.3877390676312	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGTGTGGCAGCCCCC	NA	False	NA	-1	True	AATAAA	-25	NA	99355629	99319915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
ENSMUST00000023749.15	chr15	+	2452	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_9	135.383406171756	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290762	99307930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000023756.12	chr15	-	2933	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_16	66.1194172974173	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATGTTGGTTTTCTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	99549537	99518377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ENSMUST00000023758.9	chr15	+	4114	12	FSM	ENSMUSG00000023017.11	ENSMUST00000023758.9	4114	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.84299923111125	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCAGTGTTGGTTTTC	NA	False	NA	2	True	AATAAA	-15	NA	99568248	99599009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
ENSMUST00000023759.6	chr15	+	3307	13	FSM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_12	25.0281785638153	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTGCTGTCTGGAGGG	7541	False	NA	26	True	AATAAA	-17	NA	99600009	99611872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
ENSMUST00000023761.4	chr15	+	2090	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGATGTATGAGTCT	NA	False	NA	NA	False	AATAAA	-24	NA	99623527	99627413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99623730_99625525
ENSMUST00000023761.4-0	chr15	+	576	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	30	1484	0	478	multi-exon	FALSE	canonical	3	1440	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTAGTGGTTCTGTG	NA	False	NA	20	True	ATTAAA	-15	NA	99623557	99625929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99623730_99625525
ENSMUST00000023762.13	chr15	-	2096	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	16.8332416572494	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670482	99633472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUST00000023769.11	chr15	+	2365	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	32.1334024895521	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	False	NA	13	True	ATTAAA	-16	NA	100125699	100159125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ENSMUST00000023774.12	chr15	-	2116	17	FSM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	53	856	0	-856	multi-exon	FALSE	canonical	1	67	junction_1	39.2515923243886	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGTGAGTTAGGTCTT	NA	False	NA	0	True	TATAAA	-25	NA	100320883	100286634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUST00000023775.9	chr15	-	1108	8	FSM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.7998724483441	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCTTGCATTTATAAT	5885	False	NA	2	True	AATAAA	-20	NA	100585802	100572301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014_100583116_100585005_100585089_100585734
ENSMUST00000023776.13-1	chr15	+	4630	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	0	7160	0	778	multi-exon	FALSE	canonical	3	11	junction_2	8.52355804031783	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTAGACCTCCCCTT	NA	False	NA	NA	False	NA	NA	NA	100659627	100714689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ENSMUST00000023779.8	chr15	+	2477	7	FSM	ENSMUSG00000023034.8	ENSMUST00000023779.8	2477	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	46.5895195653844	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	False	NA	19	True	AATAAA	-21	NA	101164726	101172676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101164853_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUST00000023803.8	chr15	+	1437	7	FSM	ENSMUSG00000023043.8	ENSMUST00000023803.8	1437	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.13731754650732	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTCCTTGGCAG	NA	False	NA	12	True	AATAAA	-24	NA	101936614	101940462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101937110_101937900_101937984_101938257_101938415_101939053_101939219_101939329_101939456_101939730_101939955_101940275
ENSMUST00000023805.3	chr15	-	2279	15	FSM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_14	14.588400480225	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	2729	False	NA	NA	False	AATAAA	-17	NA	102097493	102085433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321
ENSMUST00000023806.14	chr15	+	2208	15	FSM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	3.76408917893011	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATCTTGTCTCTCTTTT	NA	False	NA	NA	False	NA	NA	NA	102058960	102071904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102059148_102059540_102059597_102061582_102061720_102062395_102062456_102062695_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ENSMUST00000023813.9	chr15	+	1523	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	28.7706447616316	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426893	102432111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUST00000023818.11	chr15	-	2824	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_14	14.2851785613836	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTCATGACGTATGTT	NA	False	NA	-6	True	AATATA	-19	NA	102630613	102615211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
ENSMUST00000023826.5	chr14	-	852	5	FSM	ENSMUSG00000023064.5	ENSMUST00000023826.5	852	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	6.72681202353685	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCTTCTTCTTTGTGC	5954	False	NA	NA	False	AATAAA	-19	NA	34096746	34092230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_34092523_34092813_34092874_34095212_34095341_34095627_34095670_34096416
ENSMUST00000023828.9	chr18	+	7271	49	FSM	ENSMUSG00000023066.11	ENSMUST00000023828.9	7271	49	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_17	5.75166038828982	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGTGTATTTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	88989913	89149140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_88990203_88990495_88990684_88991641_88991820_88992453_88992544_88993811_88993903_88995796_88995912_88997689_88997841_89001933_89002100_89004017_89004200_89007558_89007675_89013640_89013812_89027365_89027579_89028975_89029089_89031095_89031223_89032665_89032792_89033248_89033366_89035302_89035443_89038220_89038393_89039787_89039888_89045082_89045172_89047015_89047134_89055114_89055212_89056010_89056080_89060259_89060449_89060982_89061223_89064139_89064285_89066489_89066645_89071643_89071864_89078484_89078614_89078875_89078987_89082224_89082384_89083970_89084043_89091668_89091859_89093550_89093643_89100017_89100109_89108550_89108741_89109939_89110031_89113616_89113771_89119754_89119893_89121967_89122186_89126172_89126279_89127374_89127473_89128797_89128876_89131448_89131576_89133568_89133769_89138955_89139224_89146879_89146984_89147873_89147944_89148722
ENSMUST00000023829.8	chr17	+	1913	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	0	0	0	0	multi-exon	FALSE	canonical	3	1159	junction_2	73.5	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4647	False	NA	24	True	NA	NA	NA	29312742	29319696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29312836_29317370_29317812_29318317
ENSMUST00000023830.16	chr10	+	4605	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTAGAATTTGAGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52293642	52316279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ENSMUST00000023830.16-1	chr10	+	3624	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	0	981	0	-981	multi-exon	FALSE	canonical	3	398	junction_2	27.0370116691915	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGTAGTAGTATGTGA	NA	False	NA	5	True	AATAAA	-18	NA	52293642	52315298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ENSMUST00000023836.4	chrX	-	1763	6	FSM	ENSMUSG00000023074.12	ENSMUST00000023836.4	1763	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.7804182083788	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCCCCCT	NA	False	NA	NA	False	AATAAA	-7	NA	52459379	52433897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52434867_52436580_52436743_52444529_52444751_52446286_52446363_52446450_52446705_52459298
ENSMUST00000023849.15	chr3	+	3059	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	3.5	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTCTAAAAGGAATCTG	9146	False	NA	27	True	AATAAA	-36	NA	51131867	51159065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_51132709_51155225_51155496_51157117
ENSMUST00000023851.9	chr6	-	432	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	443	0	0	0	multi-exon	FALSE	canonical	3	2597	junction_4	429.359042643799	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCCATGTTATTG	-4	True	NA	-31	True	ATTAAA	-27	NA	24527569	24518664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
ENSMUST00000023854.10	chrX	+	2356	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	4.78423336480244	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCTGTCTTTTTATTC	NA	False	NA	12	True	AATAAA	-18	NA	55777146	55838706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUST00000023856.9	chr2	+	1196	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	15.0996688705415	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGTCTCAGTCTGT	4784	False	NA	19	True	AATAAA	-20	NA	19376446	19399787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
ENSMUST00000023867.8	chr5	+	4995	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATGATTTGTCTTCCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	134611543	134630659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ENSMUST00000023867.8-0	chr5	+	1451	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	67	3477	0	0	multi-exon	FALSE	canonical	3	1115	junction_7	96.2091991443646	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611610	134627182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ENSMUST00000023869.15	chr5	+	2339	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	0	0	0	0	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCGCTAACTGAATTTG	8978	False	NA	NA	False	AATGAA	-2	NA	124045237	124066898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUST00000023869.15-1	chr5	+	989	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	107	1243	0	459	multi-exon	FALSE	canonical	3	1477	junction_4	100.760982082372	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTTTTTTTTTCTCTT	9085	False	NA	11	True	AATAAA	-20	NA	124045344	124065655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUST00000023873.12	chr14	-	2691	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_14	59.4941895797396	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	4695	False	NA	-11	True	AATAAA	-25	NA	54754982	54744643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ENSMUST00000023882.14	chr7	+	4116	27	FSM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_24	19.2187654844311	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGGATGTGCCTGTGT	NA	False	NA	15	True	AATAAA	-29	NA	18758301	18788542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ENSMUST00000023911.11	chr16	-	2143	10	FSM	ENSMUSG00000023143.11	ENSMUST00000023911.11	2143	10	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	7.98764478027175	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCACCAGGGGGCGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	5021876	5013152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
ENSMUST00000023913.11	chr16	+	2495	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	29.2350389088163	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGAAAGCGTGCTTC	NA	False	NA	30	True	AATAAA	-24	NA	95946606	95959052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ENSMUST00000023918.13	chr1	+	3511	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	0	0	0	0	multi-exon	TRUE	canonical	3	1145	junction_2	98.7764172879585	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGTGGGATTTAATGT	NA	False	NA	17	True	ATTAAA	-21	NA	151220227	151240173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUST00000023924.4	chr14	-	2401	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_4	6.88767014308903	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTATATACCTT	NA	False	NA	-15	True	NA	NA	NA	14389406	14377938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ENSMUST00000023952.10	chr15	-	1958	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	4.93552175559991	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGCATTCGTGTAGGT	5892	False	NA	6	True	AATAAA	-32	NA	101912917	101905132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUST00000023958.10	chr6	-	2850	15	FSM	ENSMUSG00000023191.10	ENSMUST00000023958.10	2850	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	4.42396073348629	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGTCTGCTCTATCCC	5483	False	NA	NA	False	AATAAA	-27	NA	124834715	124818051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124818803_124819034_124819176_124821978_124822055_124822164_124822283_124822470_124822622_124822904_124823007_124827588_124827714_124827880_124827949_124828041_124828095_124830013_124830104_124831273_124831411_124831810_124831943_124832043_124832240_124832906_124833060_124834158
ENSMUST00000023994.10	chr2	-	1768	8	FSM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	34.9080424626107	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAGACATTTTCTTCT	NA	False	NA	-26	True	AATAAA	-1	NA	84605748	84595730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083_84605159_84605706
ENSMUST00000024004.9	chr8	+	1058	6	FSM	ENSMUSG00000023235.15	ENSMUST00000024004.9	1058	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.67097875150313	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTCTAGTGTGCAGTA	7913	False	NA	NA	False	AATAAA	-35	NA	4399587	4410020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_4399656_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ENSMUST00000024011.10	chr14	-	3392	5	FSM	ENSMUSG00000023243.10	ENSMUST00000024011.10	3392	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	12.5573683548744	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGTATGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	20231877	20190124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20192526_20194702_20194872_20195023_20195191_20196568_20196681_20231334
ENSMUST00000024031.13	chr9	-	1529	15	FSM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_14	78.143510052117	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGGACAGTCATGGAA	NA	False	NA	-7	True	AATAAA	-27	NA	106315518	106310179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
ENSMUST00000024042.5	chr15	+	1366	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	99.7619388566824	745	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGACGTGTTGGTTTGTTT	NA	False	NA	17	True	AATAAA	-26	NA	88703848	88710886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ENSMUST00000024047.12	chr9	+	1596	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_8	33.0111250186963	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGAGCCTGGGTGCCTTT	NA	False	NA	19	True	AATAAA	-16	NA	106080306	106092588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUST00000024056.10	chr4	+	1582	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	11	1890	0	0	multi-exon	FALSE	canonical	3	207	junction_1	340.827324764495	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	787	False	NA	37	True	TATAAA	-19	NA	156028317	156042171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUST00000024078.15	chr19	+	1809	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_3	49.1747902893342	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACTTTTGACTCG	NA	False	NA	25	True	ATTAAA	-33	NA	37184941	37199550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ENSMUST00000024112.8	chr16	+	2417	14	FSM	ENSMUSG00000023341.16	ENSMUST00000024112.8	2417	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	1.68530017693897	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCACTTTGAATTGGGGG	NA	False	NA	NA	False	AATAAA	-13	NA	97337282	97362099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_97337374_97339817_97339930_97345667_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123_97353264_97357158_97357320_97357801_97357879_97359719_97359969_97361538
ENSMUST00000024119.11	chr5	-	2168	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGCTGGTCTTTCA	1527	False	NA	NA	False	CATAAA	-41	NA	137312666	137307915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
ENSMUST00000024119.11-0	chr5	-	1703	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	214	251	0	-251	multi-exon	FALSE	canonical	3	95	junction_6	14.9248115565993	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTCCAAGTCTGT	1741	False	NA	-8	True	NA	NA	NA	137312452	137308166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
ENSMUST00000024123.9	chr5	+	3207	18	FSM	ENSMUSG00000023353.15	ENSMUST00000024123.9	3207	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	48.4543090880899	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24657174	24707045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUST00000024171.14	chr6	+	3237	24	FSM	ENSMUSG00000023403.15	ENSMUST00000024171.14	3237	24	0	0	0	0	multi-exon	FALSE	canonical	2	108	junction_8	52.5929548855327	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	173	False	NA	NA	False	AATAAA	-22	NA	49372537	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
ENSMUST00000024179.6	chr14	+	3267	10	FSM	ENSMUSG00000023411.13	ENSMUST00000024179.6	3267	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	7.13537527022325	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGCTCCAGAGCTCTT	NA	False	NA	18	True	AATAAA	-18	NA	56062251	56071400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56070262_56071013
ENSMUST00000024249.5	chr15	+	1757	9	FSM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.35290287978653	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTACTGTGTTGGTCTG	-1	True	NA	6	True	AATAAA	-18	NA	98953061	98956854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
ENSMUST00000024260.14	chr9	+	2035	13	FSM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_11	32.902212016148	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	1600	False	NA	27	True	AATAAA	-20	NA	106331040	106341211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ENSMUST00000024270.14	chr6	+	1009	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	547	420	0	-251	multi-exon	FALSE	canonical	0	0	junction_3	347.474660946665	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTAAGAAGTTAGAGCA	1362	False	NA	32	True	ATTAAA	-19	NA	124807197	124810244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUST00000024338.5	chr4	+	1315	8	FSM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	2.37332110369088	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGCACTCTGCTTAT	NA	False	NA	10	True	AATAAA	-24	NA	156046774	156051086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
ENSMUST00000024470.13	chr5	+	1596	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_5	17.423642940939	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTTGCTATTATTTAA	NA	False	NA	12	True	TATAAA	-17	NA	124250359	124253546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ENSMUST00000024470.13-0	chr5	+	1174	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	24	398	0	0	multi-exon	FALSE	canonical	3	59	junction_5	17.423642940939	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTTGGGTCATTCTTT	NA	False	NA	25	True	AATAAA	-40	NA	124250383	124253148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ENSMUST00000024486.14	chr11	+	1332	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	23.6999472573253	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095213	88102333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUST00000024492.15	chr11	+	2075	11	FSM	ENSMUSG00000056938.17	ENSMUST00000024492.15	2075	11	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_5	46.8785665309851	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCTGTCTGGGAACCC	NA	False	NA	5	True	ATTAAA	-15	NA	102992513	103003025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994935_102994935_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUST00000024518.11	chr15	-	1261	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	21.3388598283861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98779361	98775658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
ENSMUST00000024570.6	chr17	-	5542	16	FSM	ENSMUSG00000015659.13	ENSMUST00000024570.6	2033	16	-14	-3495	0	1625	multi-exon	FALSE	canonical	3	21	junction_12	20.0614611188274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	2593	False	NA	-12	True	NA	NA	NA	6130016	6090845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ENSMUST00000024572.10	chr17	-	1614	8	FSM	ENSMUSG00000023806.11	ENSMUST00000024572.10	1614	8	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	24.1119836409624	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCGTTCAAGGGCCATG	NA	False	NA	NA	False	NA	NA	NA	7215755	7172114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
ENSMUST00000024575.8	chr17	+	5406	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_19	15.0827716285834	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGGGATAATGAG	NA	False	NA	NA	False	AATAAA	-22	NA	7437513	7570714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ENSMUST00000024594.9	chr17	+	1915	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	26.473748790075	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAGTGTTTACACAA	NA	False	NA	28	True	ATTAAA	-19	NA	12338170	12438532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUST00000024599.14	chr17	-	8887	48	FSM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_32	38.5858675109275	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTGACTCACCCCACC	5618	False	NA	0	True	AATAAA	-19	NA	12988551	12901292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
ENSMUST00000024620.8	chr17	+	2024	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	263	933	0	-933	multi-exon	FALSE	canonical	3	346	junction_3	38.1895855495244	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594833	17614228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ENSMUST00000024627.14	chr17	+	7916	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	0	0	0	0	multi-exon	TRUE	canonical	3	278	junction_29	37.9898375240279	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATGGCTTGTCTGCTATG	NA	False	NA	NA	False	AATAAA	-23	NA	15925228	15992872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ENSMUST00000024636.15	chr17	+	3077	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_6	38.250587420542	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTACAGTGTTGGTTTT	NA	False	NA	30	True	ATTAAA	-22	NA	8384371	8415307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ENSMUST00000024657.12	chr17	-	1663	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_1	72.874056420468	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181535	15165270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ENSMUST00000024698.10	chr17	-	984	4	FSM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	6.34209919681348	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGGCCTGATCCCTAAC	NA	False	NA	-1	True	AATAAA	-18	NA	23896442	23894418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23895021_23895112_23895248_23895492_23895598_23896300
ENSMUST00000024699.4	chr17	+	1622	3	FSM	ENSMUSG00000023906.4	ENSMUST00000024699.4	1622	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGATGTCTCTTGGT	NA	False	NA	9	True	AATAAA	-23	NA	23898222	23901420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_23898382_23898731_23898796_23900021
ENSMUST00000024701.9	chr17	+	2040	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	0	0	0	0	multi-exon	TRUE	canonical	3	384	junction_2	52.6761379583211	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATAGCTCTTCTTGTCCCT	2938	False	NA	29	True	AATAAA	-43	NA	23945309	23955704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUST00000024702.5	chr17	-	2575	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	3.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGCCTGACCACATTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	23959372	23955159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23956974_23957113_23957336_23958833
ENSMUST00000024702.5-0	chr17	-	2025	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	0	550	0	-550	multi-exon	FALSE	canonical	3	32	junction_1	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTGCCACATGAGCAAC	NA	False	NA	NA	False	AATAAA	-15	NA	23959372	23955709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23956974_23957113_23957336_23958833
ENSMUST00000024704.10	chr17	-	694	3	FSM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTAGTTTTTGTTGTTGT	NA	False	NA	0	True	AATAAA	-26	NA	24005055	23995889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23996074_23998601_23999031_24004974
ENSMUST00000024709.9	chr17	-	5364	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	False	NA	-3	True	AATAAA	-17	NA	43187280	43103841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ENSMUST00000024709.9-0	chr17	-	5398	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	-276	242	0	-241	multi-exon	FALSE	canonical	3	147	junction_3	39.8587471351445	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTATTAATATTTTTAG	NA	False	NA	-9	True	AATAAA	-45	NA	43187556	43104083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ENSMUST00000024717.10	chr17	-	5435	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_3	5.14990698460791	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATCCACTTCTTCCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	51486196	51040151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ENSMUST00000024717.10-0	chr17	-	4792	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	-167	810	0	70	multi-exon	FALSE	canonical	2	15	junction_3	5.14990698460791	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATTAAGCCCTACTGTC	NA	False	NA	NA	False	AATACA	-19	NA	51486363	51040961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ENSMUST00000024725.5	chr17	-	2225	13	FSM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	436	0	421	0	multi-exon	TRUE	canonical	2	7	junction_1	9.14998482087387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTCCTGGTTTTGCTG	NA	False	NA	-4	True	ATTAAA	-14	NA	53769913	53705916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_53706148_53707773_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
ENSMUST00000024727.10	chr17	-	3027	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_9	75.0022221893014	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAGCCTTTTGTTTGAA	2184	False	NA	-2	True	AATAAA	-20	NA	45744663	45702809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ENSMUST00000024731.9	chr17	-	1160	8	FSM	ENSMUSG00000023935.11	ENSMUST00000024731.9	1160	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_7	6.20730313782869	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGCCTCTCCCATGGTA	NA	False	NA	NA	False	TATAAA	-21	NA	45785864	45759862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45760118_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ENSMUST00000024733.9	chr17	+	3349	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_8	22.4045468336421	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	NA	False	NA	19	True	AATACA	-33	NA	45817766	45831769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ENSMUST00000024734.8	chr17	+	645	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	143	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGAGCTGTGATCG	NA	False	NA	37	True	AATAAA	-26	NA	45997247	46009421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_45997354_46006407_46006499_46008973
ENSMUST00000024736.14	chr17	-	3628	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTGCCGCTTACTTTT	NA	False	NA	0	True	AATAAA	-30	NA	53996361	53981813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ENSMUST00000024736.14-0	chr17	-	2313	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	47	1268	0	-1268	multi-exon	FALSE	canonical	3	305	junction_7	54.3666660279992	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATGTGTGTATGTATG	NA	False	NA	-3	True	AATAAA	-24	NA	53996314	53983081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ENSMUST00000024739.14	chr17	-	2520	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	0	0	0	0	multi-exon	TRUE	canonical	3	9221	junction_4	988.252604347694	17702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884197	45878700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ENSMUST00000024742.9	chr17	+	2435	6	FSM	ENSMUSG00000023947.9	ENSMUST00000024742.9	2435	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.44948974278318	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGTTATACGTTGCAA	NA	False	NA	NA	False	ATTAAA	-17	NA	45866628	45874095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927
ENSMUST00000024747.14	chr17	-	2765	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	191.124671353543	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46342741	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ENSMUST00000024748.14	chr17	+	2966	12	FSM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	11.1762735698931	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTATTCTTAAGACA	NA	False	NA	5	True	AATAAA	-18	NA	46471957	46480296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ENSMUST00000024749.9	chr17	-	3238	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_7	5.44426303552648	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7123	False	NA	-12	True	AATAAA	-15	NA	46513571	46482280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
ENSMUST00000024756.5	chr17	+	2534	4	FSM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.40870359029762	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATAGTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	44389735	44397450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_44389874_44391537_44392402_44393634_44393812_44396095
ENSMUST00000024757.14	chr17	-	4560	4	FSM	ENSMUSG00000023961.17	ENSMUST00000024757.14	4560	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	10.2740233382816	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGCCTTCTTAATTTG	NA	False	NA	NA	False	AATAAA	-17	NA	44416700	44407198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416539
ENSMUST00000024761.13	chr17	-	4925	9	FSM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.68874983337776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATAATTGAGCTGAAT	NA	False	NA	NA	False	NA	NA	NA	63807012	63364446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
ENSMUST00000024761.13-0	chr17	-	3262	9	FSM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	-352	2015	-352	-529	multi-exon	FALSE	canonical	3	52	junction_1	4.68874983337776	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTCGCTTTTACTG	NA	False	NA	-7	True	AATAAA	-24	NA	63807364	63366461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
ENSMUST00000024763.10	chr17	+	884	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	1040	junction_5	46.4732180938656	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	False	NA	19	True	AATAAA	-19	NA	46421911	46439836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUST00000024766.7	chr17	-	1195	7	FSM	ENSMUSG00000023971.10	ENSMUST00000024766.7	1195	7	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	46985181	46978383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUST00000024774.14	chr17	+	1668	4	FSM	ENSMUSG00000023979.15	ENSMUST00000024774.14	1668	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.64279609239471	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTGTCCTGGAGGTGAA	1130	False	NA	NA	False	ATTAAA	-15	NA	47696317	47703892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47696622_47700034_47700185_47701905_47702027_47702799
ENSMUST00000024778.3	chr17	+	2054	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	32.2937902527543	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGTAGTTGCCTTCTT	NA	False	NA	NA	False	CATAAA	-16	NA	47922506	47935343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
ENSMUST00000024782.12	chr17	+	1388	9	FSM	ENSMUSG00000023987.15	ENSMUST00000024782.12	1388	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	162.479181358721	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48037766	48045407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_48037890_48039666_48039827_48040176_48040295_48041018_48041138_48041523_48041724_48043309_48043430_48043885_48044037_48044681_48044781_48045109
ENSMUST00000024783.9	chr17	-	3854	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTTAAGACCCCACAATC	2341	False	NA	-6	True	AATAAA	-17	NA	47922417	47910255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUST00000024783.9-1	chr17	-	2546	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	257	1051	257	-1051	multi-exon	FALSE	canonical	3	435	junction_6	15.1180539605981	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAAGGTTTGGTCTGTTG	2598	False	NA	-4	True	NA	NA	NA	47922160	47911306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUST00000024786.14	chr17	+	2296	8	FSM	ENSMUSG00000023990.19	ENSMUST00000024786.14	2296	8	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_3	28.7025562397128	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	6971	False	NA	14	True	AGTAAA	-14	NA	48096644	48103340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUST00000024794.12	chr17	-	956	5	FSM	ENSMUSG00000023995.13	ENSMUST00000024794.12	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	2.06155281280883	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCTGGTGTAAGGTGGA	NA	False	NA	-1	True	AATAAA	-19	NA	48758550	48755462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48755829_48756047_48756190_48756910_48757099_48757899_48758090_48758480
ENSMUST00000024797.16	chr17	+	2646	11	FSM	ENSMUSG00000064120.15	ENSMUST00000024797.16	2646	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	7.06328535456412	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTGGGGACTCTTGT	NA	False	NA	6	True	AATAAA	-22	NA	49735391	49762460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
ENSMUST00000024802.10	chr17	-	1462	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_1	125.889722464633	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGGCCTTTTCTCTTTT	9689	False	NA	1	True	NA	NA	NA	29483160	29469776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
ENSMUST00000024811.9	chr17	+	2698	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	0	0	0	0	multi-exon	FALSE	canonical	3	1677	junction_4	112.874443520223	3697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTTTTCCATTCATT	NA	False	NA	17	True	AATAAA	-18	NA	29709726	29715086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ENSMUST00000024816.13	chr17	+	6380	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTCTCTGATGT	NA	False	NA	28	True	AATAAA	-30	NA	29879568	29924953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ENSMUST00000024816.13-0	chr17	+	3734	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	26	2620	0	0	multi-exon	FALSE	canonical	3	368	junction_15	33.7979652859003	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879594	29922333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ENSMUST00000024817.15	chr17	+	1962	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	100	3342	0	0	multi-exon	FALSE	canonical	3	261	junction_5	10.0387006232919	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCTCAGCTGGGCTTC	NA	False	NA	16	True	AATAAA	-15	NA	29833863	29860623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ENSMUST00000024823.14	chr17	-	2024	7	FSM	ENSMUSG00000024026.14	ENSMUST00000024823.14	2024	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	1513.88137103128	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGCAGCAAGTCCCT	NA	False	NA	-12	True	AATAAA	-24	NA	30831586	30811834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822360_30822492_30822993_30823077_30831441
ENSMUST00000024829.8	chr17	+	3581	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	40	2211	0	1289	multi-exon	FALSE	canonical	3	27	junction_11	5.07947048501744	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCATTTAATTTCAAG	NA	False	NA	NA	False	ATTAAA	-18	NA	31276700	31334751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ENSMUST00000024832.9	chr17	-	1191	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	7.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTCTGATGTCGCTTC	NA	False	NA	-1	True	AATAAA	-26	NA	31496357	31473992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
ENSMUST00000024839.6	chr17	-	4521	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	0	0	0	0	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTGTGAGAGCCCATTC	NA	False	NA	-4	True	AATAAA	-34	NA	32074778	32063223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ENSMUST00000024839.6-0	chr17	-	3445	14	FSM	ENSMUSG00000024042.8	ENSMUST00000024839.6	4521	14	0	1076	0	-1076	multi-exon	FALSE	canonical	2	135	junction_9	20.6380472449028	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTCTATTTT	NA	False	NA	-22	True	TATAAA	-15	NA	32074778	32064299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32065618_32066006_32066236_32066868_32067151_32067605_32067823_32067932_32068056_32068492_32068649_32068901_32069126_32069699_32069824_32069914_32070040_32070208_32070371_32070506_32070571_32073181_32073299_32073867_32074039_32074645
ENSMUST00000024840.12	chr17	-	5322	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_17	5.76530609120275	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAAGTGTTTCTTTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	68311115	68149707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ENSMUST00000024851.10	chr17	-	2201	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	0	0	0	0	multi-exon	TRUE	canonical	3	248	junction_10	48.8427003246135	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCCCTCCCATTTCTG	NA	False	NA	-11	True	AATAAA	-19	NA	71833852	71803094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
ENSMUST00000024860.9	chr17	+	3659	6	FSM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	1.35646599662505	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGGTGACTGAGCAT	NA	False	NA	3	True	AATACA	-20	NA	74111835	74139089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74112465_74123225_74123403_74127472_74127571_74134144_74134558_74135040_74135206_74136912
ENSMUST00000024869.8	chr17	+	4672	17	FSM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	37.2180546744453	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9867	False	NA	33	True	AATAAA	-24	NA	74646007	74698110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUST00000024870.9	chr17	+	2148	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_5	21.3572043468894	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATTTACAATCGTAGTA	NA	False	NA	NA	False	AATAAA	-23	NA	74702602	74731216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUST00000024870.9-0	chr17	+	1581	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	13	554	0	0	multi-exon	FALSE	canonical	3	152	junction_5	21.3572043468894	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGTGGCAGTGAGGT	NA	False	NA	14	True	TATAAA	-17	NA	74702615	74730662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUST00000024873.7	chr17	+	2133	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_2	44.687358391384	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAACCAAACAGGTA	NA	False	NA	NA	False	NA	NA	NA	74796487	74807272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ENSMUST00000024884.5	chr17	-	4313	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAAATCTCTCCTCTCT	NA	False	NA	NA	False	AATAAA	-5	NA	79190002	79159992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
ENSMUST00000024884.5-0	chr17	-	2347	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	25	1941	0	849	multi-exon	FALSE	canonical	3	40	junction_8	9.77525219907679	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAATAGGGTTTTTTT	NA	False	NA	-3	True	ATTAAA	-23	NA	79189977	79161933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
ENSMUST00000024885.10	chr17	-	4070	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGTGTCTATTAGCAT	NA	False	NA	-3	True	ATTAAA	-40	NA	79244495	79226434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ENSMUST00000024885.10-0	chr17	-	3330	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	0	740	0	99	multi-exon	FALSE	canonical	3	465	junction_13	57.736720454914	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	-38	True	AATAAA	-14	NA	79244495	79227174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ENSMUST00000024887.6	chr17	+	1749	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTGTCTCCTTATCAA	NA	False	NA	NA	False	AGTAAA	-12	NA	79244564	79254928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ENSMUST00000024887.6-0	chr17	+	1411	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	12	326	0	0	multi-exon	FALSE	canonical	3	388	junction_6	40.441391826191	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAACTAGTATCTCT	NA	False	NA	24	True	AATAAA	-33	NA	79244576	79254602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ENSMUST00000024888.15	chr17	-	4531	9	FSM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	23.2456313099903	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTGTGTGACCCTAT	NA	False	NA	-4	True	AATAAA	-29	NA	64620026	64588000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995
ENSMUST00000024889.14	chr17	-	4345	8	FSM	ENSMUSG00000024083.17	ENSMUST00000024889.14	4345	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	43.6142646577086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTGTGTGACCCTAT	NA	False	NA	-4	True	AATAAA	-29	NA	64620026	64588000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995
ENSMUST00000024897.10	chr17	-	3369	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	0	0	0	0	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGGAGACTTCATGT	2963	False	NA	NA	False	AATACA	-20	NA	65920550	65885321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ENSMUST00000024897.10-0	chr17	-	1631	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	0	1738	0	355	multi-exon	FALSE	canonical	3	3309	junction_3	105.717737395387	3094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTCGATAGCTTGTTT	2963	False	NA	-17	True	AATAAA	-14	NA	65920550	65887059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ENSMUST00000024905.11	chr17	-	3811	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	0	0	0	0	multi-exon	FALSE	canonical	1	202	junction_3	142.261973611371	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTCTATTGTCCACT	NA	False	NA	NA	False	AATAAA	-31	NA	66191949	66155412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ENSMUST00000024906.6	chr17	-	4086	5	FSM	ENSMUSG00000024098.7	ENSMUST00000024906.6	4086	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	25.0636689253589	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGTTTTTTATTAATTT	8694	False	NA	1	True	AATAAA	-19	NA	66258221	66230059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ENSMUST00000024930.8	chr17	-	2166	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCGGGCAGTGGTGGTGC	3337	False	NA	NA	False	NA	NA	NA	24439764	24434027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ENSMUST00000024930.8-0	chr17	-	1981	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	0	185	0	0	multi-exon	FALSE	canonical	3	183	junction_7	23.2426810463471	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGCTTGACGGTTAA	3337	False	NA	0	True	AATAAA	-21	NA	24439764	24434212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ENSMUST00000024931.6	chr17	-	5038	6	FSM	ENSMUSG00000117406.2	ENSMUST00000024931.6	5038	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.83303027798234	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	24428505	24422821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24425922_24426181_24426257_24426366_24426418_24426539_24426690_24426772_24426962_24427032
ENSMUST00000024932.12	chr17	-	1183	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_2	838.5	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTGTGTTCTGGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	24388435	24382839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24383583_24383672_24383857_24388179
ENSMUST00000024946.7	chr17	+	1086	7	FSM	ENSMUSG00000024132.7	ENSMUST00000024946.7	1086	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	202.517008887868	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	4882	False	NA	11	True	TATAAA	-24	NA	24645656	24658294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24645717_24645826_24645914_24652115_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUST00000024954.11	chr17	+	5516	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTCGTGCCTCTTGTT	NA	False	NA	10	True	ATTAAA	-15	NA	87061127	87140838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
ENSMUST00000024954.11-0	chr17	+	3013	16	FSM	ENSMUSG00000024140.11	ENSMUST00000024954.11	5516	16	410	2093	410	-2093	multi-exon	FALSE	canonical	3	64	junction_3	13.5078577954545	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTTTTACCGTTGATG	NA	False	NA	NA	False	AATACA	-15	NA	87061537	87138745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87061737_87104543_87104735_87112620_87112773_87113184_87113270_87116785_87116905_87117011_87117218_87125782_87125890_87131107_87131256_87131834_87132050_87133007_87133199_87133932_87134044_87134919_87135426_87136117_87136245_87136413_87136529_87136737_87136912_87138378
ENSMUST00000024956.15	chr17	+	4151	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	3.74165738677394	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTACCTCAGGAGTTTT	NA	False	NA	30	True	AATAAA	-40	NA	87270509	87307497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ENSMUST00000024957.7	chr17	-	988	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_5	28.3760462362183	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGTT	NA	False	NA	-12	True	AATAAA	-15	NA	87332834	87304683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ENSMUST00000024958.9	chr17	+	5938	20	FSM	ENSMUSG00000033597.10	ENSMUST00000024958.9	5938	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	3.27755736356637	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGGCTCACACTCTT	7852	False	NA	NA	False	AATAAA	-15	NA	24707756	24727645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24708038_24714939_24714992_24715093_24715192_24715399_24715546_24715627_24715724_24715837_24715969_24717831_24717941_24718034_24718144_24718226_24718322_24718476_24718595_24719670_24719773_24719864_24719954_24720033_24720119_24720203_24720308_24721089_24721201_24721290_24721393_24722774_24722914_24722993_24724995_24725496_24725912_24726090
ENSMUST00000024959.10	chr17	+	1184	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_4	35.4427355039083	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	False	NA	4	True	AATAAA	-14	NA	87332977	87343238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUST00000024963.11	chr17	-	1792	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	31	215	0	0	multi-exon	FALSE	canonical	3	165	junction_3	69.8108555710038	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573332	87562085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
ENSMUST00000024967.14	chr17	+	3283	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_8	132.693531618287	3246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4661	False	NA	19	True	AATAAA	-16	NA	87979757	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ENSMUST00000024976.5	chr17	+	1947	7	FSM	ENSMUSG00000024160.17	ENSMUST00000024976.5	1947	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	71.820957944043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	25106138	25111123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25106563_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUST00000024978.7	chr17	+	715	5	FSM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	9.82344135219425	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAAAGTAGTGTTAAG	NA	False	NA	36	True	AATAAA	-35	NA	25115473	25116496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUST00000024981.9	chr17	-	2672	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	0	0	0	0	multi-exon	FALSE	canonical	3	1697	junction_3	70.6872513258225	3002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGCCAATATTTTTCT	4773	False	NA	-1	True	ATTAAA	-17	NA	25179663	25161443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ENSMUST00000024983.12	chr17	+	5489	30	FSM	ENSMUSG00000024169.17	ENSMUST00000024983.12	5489	30	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	11.5756314625783	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTCAAAAGGCTGTAC	7183	False	NA	15	True	AATAAA	-20	NA	25235364	25318461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ENSMUST00000024987.6	chr17	-	3434	21	FSM	ENSMUSG00000024170.16	ENSMUST00000024987.6	3434	21	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_20	19.5787512369916	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334879	25318550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334413
ENSMUST00000025007.7	chr17	-	1006	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	23.847169643377	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTACTTACTAGTTCTG	NA	False	NA	0	True	ATTAAA	-22	NA	26314576	26310707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ENSMUST00000025010.14	chr17	+	3464	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_7	42.026446699932	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332289	26342228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ENSMUST00000025014.10	chr17	+	1068	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342473	26345587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ENSMUST00000025019.9	chr17	-	1032	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_2	6.72309452558864	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	False	NA	-4	True	ATTAAA	-17	NA	26420324	26418156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
ENSMUST00000025023.15	chr17	+	1700	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	74.6521098161331	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATATGTTTACATTAGTG	NA	False	NA	13	True	ATTAAA	-25	NA	26471869	26499693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUST00000025025.7	chr17	-	1990	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	22.365648262955	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCGTGCTTTCTTTGGT	NA	False	NA	0	True	AATAAA	-20	NA	26727493	26724563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
ENSMUST00000025027.10	chr17	-	741	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9252	False	NA	-17	True	AATAAA	-18	NA	27158543	27156945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ENSMUST00000025027.10-0	chr17	-	636	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	105	0	0	0	multi-exon	FALSE	canonical	3	300	junction_6	250.570959122472	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9357	False	NA	-17	True	AATAAA	-18	NA	27158438	27156945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ENSMUST00000025034.12	chr17	-	1974	7	FSM	ENSMUSG00000057789.15	ENSMUST00000025034.12	1974	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	62.3014624404775	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCGCCTGGCATCTTTA	NA	False	NA	-2	True	AATAAA	-18	NA	27247552	27238785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27240010_27240140_27240322_27240636_27240657_27241412_27241557_27241715_27241852_27244766_27244868_27247384
ENSMUST00000025036.11	chr17	+	4577	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_12	23.0595707170123	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGTCATGGCTGTGTC	4909	False	NA	12	True	ATTAAA	-28	NA	56633073	56709864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ENSMUST00000025040.6	chr6	-	390	1	FSM	ENSMUSG00000091845.2	ENSMUST00000025040.6	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	814	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTATTTTTTCTTT	NA	False	NA	-7	True	AATAAA	-27	NA	108117470	108117080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_108117100_108117500
ENSMUST00000025045.15	chr17	-	500	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	0	0	0	0	multi-exon	TRUE	canonical	3	2713	junction_1	153.559977424675	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTGGAACTCATTCAT	1947	False	NA	2	True	AATAAA	-24	NA	27352890	27341636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
ENSMUST00000025050.13	chr17	-	2223	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_4	16.1458198924675	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTGTTCCATGTCAG	NA	False	NA	-18	True	AATAAA	-23	NA	27842469	27798355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
ENSMUST00000025053.10	chr17	-	3636	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	16.3510052260045	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGCCTGCCTTCAAT	6034	False	NA	-3	True	AATAAA	-15	NA	57242415	57199610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ENSMUST00000025057.5	chr17	-	1220	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	9.9373034571759	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	False	NA	-9	True	AATAAA	-19	NA	28126698	28120101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
ENSMUST00000025057.5-0	chr17	-	2740	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	-1518	-2	0	0	multi-exon	FALSE	canonical	3	141	junction_3	9.9373034571759	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGGGTTTCTCTGTGTTG	NA	False	NA	-7	True	AATAAA	-21	NA	28128216	28120099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
ENSMUST00000025065.12	chr17	-	3516	7	FSM	ENSMUSG00000024228.13	ENSMUST00000025065.12	4113	7	104	493	0	0	multi-exon	FALSE	canonical	3	48	junction_4	5.17740818900302	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTTGTTTGTGTATTG	NA	False	NA	-13	True	AATAAA	-25	NA	59320263	59307105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318037_59318250_59320212
ENSMUST00000025075.3	chr18	+	1427	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	0	3647	0	-3647	multi-exon	FALSE	canonical	3	117	junction_2	19.5	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGGTGTCTTTCATGA	-8	True	NA	24	True	AATATA	-19	NA	3507922	3512757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_3508286_3511256_3511545_3511981
ENSMUST00000025077.7	chr18	+	2651	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATAACAGTATTTCTA	-12	True	NA	17	True	AATAAA	-18	NA	4375591	4397330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUST00000025077.7-0	chr18	+	2094	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	12	545	0	0	multi-exon	FALSE	canonical	3	181	junction_2	18.3711730708738	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	0	True	NA	18	True	AATAAA	-20	NA	4375603	4396785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUST00000025078.10	chr18	-	2569	8	FSM	ENSMUSG00000024235.12	ENSMUST00000025078.10	2569	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	7.63450812336422	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGGGATTGTATATT	406	False	NA	NA	False	AATAAA	-26	NA	4353015	4331326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_4332437_4333817_4334065_4334616_4334770_4339496_4339604_4340546_4340809_4343021_4343190_4348980_4349339_4352851
ENSMUST00000025081.13	chr18	+	5801	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	9.45666809339164	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTGTTGTGATGTGTG	427	False	NA	NA	False	AATAAA	-19	NA	5591863	5775467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ENSMUST00000025083.14	chr18	-	6032	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	215.348105169282	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGACGTATTAGCTTG	-5	True	NA	0	True	AATAAA	-42	NA	6241523	6201001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ENSMUST00000025089.9	chr17	-	4220	34	FSM	ENSMUSG00000024242.16	ENSMUST00000025089.9	4220	34	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_19	37.8671982269756	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035522	80887945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ENSMUST00000025093.6	chr17	-	1833	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	16.3940669785982	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGCTTATAGACTC	8164	False	NA	NA	False	ATTAAA	-22	NA	81372496	81333760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ENSMUST00000025095.9	chr17	-	1076	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	644	746	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTTTTGTTTT	9947	False	NA	-23	True	AATAAA	-23	NA	83821759	83809346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_83810167_83811528_83811658_83821632
ENSMUST00000025101.10	chr17	+	1354	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	7.6412622575651	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATCTAAGTATAAATTTT	NA	False	NA	16	True	AATAAA	-24	NA	84933923	84963016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
ENSMUST00000025106.5	chr18	+	1015	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	16.2138486760204	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922211	31929754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
ENSMUST00000025109.8	chr18	+	4015	21	FSM	ENSMUSG00000024260.15	ENSMUST00000025109.8	4015	21	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_13	29.4439722184355	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	6817	False	NA	8	True	AATAAA	-20	NA	31767435	31856114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUST00000025127.5	chr18	+	4026	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTGGACTTATTCTTA	NA	False	NA	14	True	AATAAA	-18	NA	23937040	24026914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ENSMUST00000025127.5-0	chr18	+	2497	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	36	1493	0	0	multi-exon	FALSE	canonical	3	115	junction_6	13.0596920161065	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCTTTGAAATTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	23937076	24025421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ENSMUST00000025137.9	chr18	+	4134	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTGTTTACACATTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	9957905	9995489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUST00000025137.9-0	chr18	+	2099	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	271	1764	0	0	multi-exon	FALSE	canonical	0	0	junction_17	177.913574524262	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	10	True	NA	14	True	AATAAA	-14	NA	9958176	9993725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUST00000025161.10	chr17	+	2898	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_6	36.6951033823983	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGGCCTCTCATTCTCCC	292	False	NA	13	True	AATAAA	-18	NA	34138305	34148266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
ENSMUST00000025163.14	chr17	-	807	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGATTCTGTTTTGCTTTC	NA	False	NA	83	True	NA	NA	NA	34159317	34157794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
ENSMUST00000025163.14-0	chr17	-	691	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	18	98	0	0	multi-exon	FALSE	canonical	3	1067	junction_1	64.8194072447099	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTTTACAGCCAGTCT	NA	False	NA	-15	True	AATAAA	-17	NA	34159299	34157892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
ENSMUST00000025166.14	chr18	-	3302	16	FSM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	719	822	-65	-676	multi-exon	FALSE	canonical	2	10	junction_5	4.09009644004746	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGATTTTGTTACCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	16941584	16722755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
ENSMUST00000025170.11	chr17	+	2229	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_8	25.4498305996527	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCTGGACCATCCTGTA	1979	False	NA	13	True	ATTAAA	-16	NA	34159633	34168671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
ENSMUST00000025178.17	chr17	+	3383	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	0	0	0	0	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTGATTTTGTACTGT	NA	False	NA	31	True	NA	NA	NA	34174785	34186009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUST00000025178.17-0	chr17	+	2567	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	276	540	143	522	multi-exon	FALSE	canonical	2	228	junction_10	32.2850016205651	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCCTCTCCTTTGTCC	NA	False	NA	19	True	NA	NA	NA	34175061	34185469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUST00000025181.18	chr17	-	1619	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	28.3196045170126	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATGATAGATGAATAAA	NA	False	NA	-40	True	NA	NA	NA	34219321	34215026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUST00000025183.9	chr17	-	1714	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	28	292	0	0	multi-exon	FALSE	canonical	3	63	junction_3	8.5764535535124	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	2	True	NA	NA	NA	34243626	34240057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
ENSMUST00000025186.16	chr17	-	2320	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_6	39.6512575112344	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTTGTCTTTATGTG	NA	False	NA	-2	True	AATAAA	-26	NA	34250594	34247242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ENSMUST00000025193.14	chr17	-	4657	13	FSM	ENSMUSG00000024335.21	ENSMUST00000025193.14	4657	13	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_12	100.678634774216	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTTTCTTAGTGAGAT	6094	False	NA	-9	True	AATAAA	-23	NA	34341574	34330996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
ENSMUST00000025197.6	chr17	+	2399	12	FSM	ENSMUSG00000024339.13	ENSMUST00000025197.6	3442	12	1040	3	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.62221910942836	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTATGTTATGGTTACT	6186	False	NA	NA	False	AATAAA	-22	NA	34423540	34435292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34423598_34424260_34424759_34424843_34424959_34427727_34427859_34428063_34428270_34430843_34431042_34431203_34431333_34432988_34433178_34433296_34433471_34433619_34433780_34434307_34434445_34434887
ENSMUST00000025204.7	chr18	-	702	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	0	407	0	122	multi-exon	FALSE	canonical	3	3024	junction_2	66.9792671072342	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587577	36537135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
ENSMUST00000025208.7	chr18	-	5146	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGACTTTATGACTCCTCT	NA	False	NA	-4	True	ATTAAA	-18	NA	35836174	35804155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
ENSMUST00000025208.7-0	chr18	-	1218	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	0	3928	0	0	multi-exon	FALSE	canonical	3	57	junction_2	8.80630571852711	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTTTACTCTCTGCTG	NA	False	NA	-10	True	AATACA	-14	NA	35836174	35808083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
ENSMUST00000025209.12	chr18	-	702	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_2	20.7980768341691	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAATGCCCAACCTCTC	NA	False	NA	-7	True	AATAAA	-26	NA	35795239	35789741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
ENSMUST00000025212.8	chr18	-	3026	15	FSM	ENSMUSG00000024354.14	ENSMUST00000025212.8	3026	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.4032291201801	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTCTGTGTTATGGA	NA	False	NA	NA	False	ATTAAA	-29	NA	35760297	35747656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35748741_35752440_35752706_35754819_35754916_35755339_35755484_35755564_35755695_35755911_35756018_35756503_35756652_35757123_35757281_35757480_35757602_35757734_35757917_35758052_35758121_35758240_35758330_35758860_35759019_35759411_35759547_35760154
ENSMUST00000025215.10	chr18	-	1703	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	10.8423039781937	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	35631982	35399448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ENSMUST00000025217.11	chr18	-	3049	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	0	0	0	0	multi-exon	TRUE	canonical	3	5978	junction_5	267.479905787332	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCGTTGTAATCTTCT	199	False	NA	-19	True	CATAAA	-5	NA	35087410	35070466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUST00000025217.11-0	chr18	-	2824	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	0	225	0	-225	multi-exon	FALSE	canonical	3	5978	junction_5	267.479905787332	8035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	199	False	NA	-17	True	AATAAA	-13	NA	35087410	35070691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUST00000025218.8	chr18	-	3709	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGTGCTTGAGATT	NA	False	NA	NA	False	ATTAAA	-16	NA	35065060	35035837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ENSMUST00000025218.8-0	chr18	-	2367	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	0	1342	0	-1342	multi-exon	FALSE	canonical	3	901	junction_10	88.1591742248077	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGATGATTTTGCTTG	NA	False	NA	-10	True	AATAAA	-31	NA	35065060	35037179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ENSMUST00000025228.12	chr18	-	2084	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	259.182247655969	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACTACTGTTCTTTCTA	NA	False	NA	NA	False	AATAAA	-14	NA	34784788	34764003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUST00000025230.15	chr17	-	2641	18	FSM	ENSMUSG00000024371.15	ENSMUST00000025230.15	2641	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	3.65842630716852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTGTCTTATGTCTT	NA	False	NA	0	True	AATAAA	-18	NA	35101076	35081580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082838_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35098857_35099044_35100547_35100773_35100925
ENSMUST00000025234.7	chr18	-	3566	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGGTCTCTTTACTG	NA	False	NA	0	True	AATAAA	-13	NA	34139972	33929379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ENSMUST00000025234.7-0	chr18	-	3023	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	-47	590	0	0	multi-exon	FALSE	canonical	3	87	junction_23	34.3352756377329	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTGGGCTGTCCCAG	NA	False	NA	38	True	NA	NA	NA	34140019	33929969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ENSMUST00000025236.9	chr18	-	5097	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	4.66476151587624	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGATGTATATTTTTA	NA	False	NA	-80	True	AATAAA	-14	NA	33346915	33332407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ENSMUST00000025241.7	chr18	+	2708	15	FSM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	14.4393524078881	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTCTATTTTATTG	NA	False	NA	NA	False	TATAAA	-24	NA	32373352	32403204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ENSMUST00000025243.5	chr18	+	2777	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	27	6809	0	0	multi-exon	FALSE	canonical	3	171	junction_3	17.4029855290822	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGTCTCATCATTGT	NA	False	NA	17	True	AATAAA	-18	NA	32200820	32230572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ENSMUST00000025246.13	chr17	-	961	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	47.9780042195264	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35340262	35335173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ENSMUST00000025249.7	chr17	-	757	6	FSM	ENSMUSG00000024391.8	ENSMUST00000025249.7	1013	6	256	0	256	0	multi-exon	FALSE	canonical	3	28	junction_5	5.65685424949238	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTTTTGTCTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	35350770	35347972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35348112_35349055_35349155_35349383_35349483_35349814_35349895_35350170_35350326_35350585
ENSMUST00000025250.14	chr17	+	3858	25	FSM	ENSMUSG00000024392.18	ENSMUST00000025250.14	3858	25	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_11	162.018431736091	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8488	False	NA	32	True	AATAAA	-33	NA	35354153	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUST00000025253.12	chr17	-	6888	31	FSM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_20	122.598119434553	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383873	35368051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ENSMUST00000025264.8	chr18	+	4575	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	93.6872299310541	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCACCCACTGTGCAG	5655	False	NA	39	True	AATACA	-22	NA	31937150	32040450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ENSMUST00000025270.8	chr18	+	1889	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	19	1882	0	0	multi-exon	FALSE	canonical	3	378	junction_8	18.23058327829	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAATATAATTCTTTAAC	5524	False	NA	18	True	AATAAA	-28	NA	12261816	12288562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUST00000025271.17	chr17	+	1362	5	FSM	ENSMUSG00000024406.17	ENSMUST00000025271.17	1362	5	0	0	0	0	multi-exon	FALSE	canonical	3	3795	junction_3	232.519354033164	2684	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGAATTTTGTTTTCCT	3036	False	NA	0	True	AATAAA	-20	NA	35816914	35821669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35817381_35819999_35820121_35820304_35820436_35820877_35821037_35821184
ENSMUST00000025276.15	chr18	+	2170	20	FSM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_9	24.4724957266604	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGTTGCTAACTCCC	NA	False	NA	NA	False	AATAAA	-45	NA	12301773	12323054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ENSMUST00000025278.8	chr11	+	756	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_3	47.8632310744781	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAAAGGGACAGGACAG	NA	False	NA	19	True	NA	NA	NA	94544592	94550915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
ENSMUST00000025279.6	chr18	-	5224	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	10.5137971521024	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGTCTTTTATTGCA	NA	False	NA	-26	True	AATAAA	-16	NA	12369457	12322749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ENSMUST00000025290.7	chr18	+	3763	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_9	40.2394085443611	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13104979	13126007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUST00000025292.15	chr17	+	3351	20	FSM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	0	0	0	0	multi-exon	TRUE	canonical	3	278	junction_2	372.558080768229	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190710	36203562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ENSMUST00000025293.5	chr18	+	1392	8	FSM	ENSMUSG00000024425.5	ENSMUST00000025293.5	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	234.910230357323	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTTCTCAATTAGT	9129	False	NA	NA	False	NA	NA	NA	38552021	38597892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597313
ENSMUST00000025295.8	chr18	-	4755	2	FSM	ENSMUSG00000024427.8	ENSMUST00000025295.8	4755	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTCGTGTTCAGTT	NA	False	NA	NA	False	TATAAA	-37	NA	38734468	38719299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_38723809_38734222
ENSMUST00000025300.13	chr18	-	4989	9	FSM	ENSMUSG00000024431.16	ENSMUST00000025300.13	4989	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	22.6770809408971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	AATAGA	-6	NA	39622899	39545039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622797
ENSMUST00000025305.16	chr17	-	1079	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	0	0	0	0	multi-exon	FALSE	canonical	3	1264	junction_4	57.4071714451542	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4296	False	NA	-6	True	AATAAA	-21	NA	36227281	36221270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUST00000025314.7	chr18	+	2394	13	FSM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_6	27.9179104200551	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGCCCTTGAGTGTG	3967	False	NA	20	True	AATAAA	-21	NA	38383311	38395682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ENSMUST00000025319.7	chr17	-	497	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	226	6	0	0	multi-exon	FALSE	canonical	3	621	junction_3	61.4262769505038	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTTCTGTGGTATC	NA	False	NA	-22	True	AATAAA	-14	NA	36568735	36566564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
ENSMUST00000025337.14	chr18	-	5596	28	FSM	ENSMUSG00000024456.17	ENSMUST00000025337.14	5596	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.129800135777	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCCCTCTAGCCTCCTT	NA	False	NA	-22	True	AATAAA	-13	NA	38068434	37976655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986762_37987532_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993567_38022267_38022277_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
ENSMUST00000025350.10	chr18	+	8616	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGGTTTTTTTGTTCT	NA	False	NA	15	True	AATAAA	-20	NA	44513593	44558036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ENSMUST00000025350.10-0	chr18	+	3020	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	-25	5621	0	-5621	multi-exon	FALSE	canonical	2	46	junction_10	33.3472637558166	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGGTCCCAGCATTCC	NA	False	NA	NA	False	AATACA	-34	NA	44513568	44552415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ENSMUST00000025356.4	chr15	+	2950	4	FSM	ENSMUSG00000024479.4	ENSMUST00000025356.4	2950	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTCACTCTTTTTTATTT	NA	False	NA	11	True	AATAAA	-21	NA	54434587	54466243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_54435034_54451709_54451881_54461806_54461963_54464066
ENSMUST00000025357.9	chr18	+	1520	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTTGCCTCCCATTC	NA	False	NA	NA	False	TATAAA	-13	NA	46874942	46923893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ENSMUST00000025357.9-0	chr18	+	1193	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	22	305	0	-102	multi-exon	FALSE	canonical	3	541	junction_4	49.1064150595419	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTGTTTTGCTTGG	NA	False	NA	NA	False	AATAAA	-26	NA	46874964	46923588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ENSMUST00000025363.7	chr18	-	2375	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	10.9068785635488	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTTCATTTTTGGTT	NA	False	NA	-10	True	AATAAA	-22	NA	36648858	36637979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
ENSMUST00000025364.6	chr18	-	3328	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTGTGTCTTTCTTGCC	NA	False	NA	NA	False	NA	NA	NA	40352482	40336948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ENSMUST00000025364.6-0	chr18	-	1709	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	86	1533	0	-1533	multi-exon	FALSE	canonical	3	266	junction_2	22.8962879087419	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTGAAGTTTACTT	NA	False	NA	-6	True	ATTAAA	-15	NA	40352396	40338481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ENSMUST00000025375.15	chr18	+	4101	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	111.046881991346	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUST00000025383.10	chr18	-	1389	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	94.5597988341534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTTCACTGAGCAA	NA	False	NA	-114	True	NA	NA	NA	49888634	49830645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
ENSMUST00000025383.10-0	chr18	-	2156	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	0	-767	0	661	multi-exon	FALSE	canonical	3	19	junction_2	94.5597988341534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTATGATTGCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	49888634	49829878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
ENSMUST00000025385.7	chr18	+	2684	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	18.279183363144	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGCTCCTCTTTGCAT	NA	False	NA	14	True	AATAAA	-23	NA	50261267	50329336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ENSMUST00000025393.14	chr18	-	3384	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_11	31.2441730104581	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTCTAGATTTGGTT	NA	False	NA	-10	True	AATAAA	-19	NA	73836851	73772079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ENSMUST00000025394.14	chr18	+	860	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTCTGCCCAGTCTC	NA	False	NA	NA	False	AATAAA	-40	NA	65933585	65950755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
ENSMUST00000025394.14-0	chr18	+	777	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	56	27	0	0	multi-exon	FALSE	canonical	3	349	junction_3	14.5244621242922	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGGCTTCCTTTTGTG	NA	False	NA	NA	False	AATAAA	-13	NA	65933641	65950728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
ENSMUST00000025396.5	chr18	-	1672	3	FSM	ENSMUSG00000024518.5	ENSMUST00000025396.5	1672	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTGCTCATCGACTACAGC	NA	False	NA	NA	False	ATTAAA	-23	NA	66072160	66067706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_66068561_66071090_66071345_66071596
ENSMUST00000025399.9	chr18	+	2727	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	7	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCTTTCTGTGTGTTTT	NA	False	NA	22	True	AATAAA	-34	NA	66591603	66598631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_66591884_66593913_66594070_66596340
ENSMUST00000025402.15	chr18	+	5736	12	FSM	ENSMUSG00000024524.18	ENSMUST00000025402.15	5736	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.66353485083816	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTTTCGGTTCCT	NA	False	NA	10	True	NA	NA	NA	67221286	67359863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67221945_67267283_67267357_67268382_67268438_67268589_67268710_67324440_67324539_67344118_67344174_67345295_67345370_67346142_67346202_67346558_67346680_67350140_67350272_67351574_67351643_67355639
ENSMUST00000025403.8	chr18	+	5054	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGTCGCCACATCTT	NA	False	NA	NA	False	NA	NA	NA	67422255	67455542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ENSMUST00000025403.8-0	chr18	+	1356	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	66	3632	0	1931	multi-exon	FALSE	canonical	3	959	junction_6	106.526800307122	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422321	67451910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ENSMUST00000025404.10	chr18	+	1115	5	FSM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_1	40.4042077016738	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCAACTGGTTTGT	6208	False	NA	28	True	AATAAA	-26	NA	67476673	67500855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67476911_67491779_67491925_67493165_67493313_67499444_67499627_67500451
ENSMUST00000025404.10-0	chr18	+	921	5	FSM	ENSMUSG00000024526.10	ENSMUST00000025404.10	1115	5	194	0	194	0	multi-exon	FALSE	canonical	1	47	junction_1	40.4042077016738	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCAACTGGTTTGT	6402	False	NA	28	True	AATAAA	-26	NA	67476867	67500855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67476911_67491779_67491925_67493165_67493313_67499444_67499627_67500451
ENSMUST00000025406.9	chr18	+	2656	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_5	82.8179710360657	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTATGTGGCCTGCATA	NA	False	NA	2	True	ATTAAA	-13	NA	52598764	52625003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUST00000025408.10	chr18	-	3094	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_14	36.0532917186489	1621	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGTTGCCATGTTGTG	NA	False	NA	-2	True	AATAAA	-31	NA	67582242	67537833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ENSMUST00000025418.4	chr18	+	1059	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	27.1871088733041	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGTTTTATCTGGAAAG	NA	False	NA	26	True	AATAAA	-32	NA	67774668	67787232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ENSMUST00000025419.9	chr18	-	1403	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_3	12.8354976529934	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551187	53539403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
ENSMUST00000025420.14	chr18	-	1568	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	132.404915801473	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTGGTTTGTGTGTGT	NA	False	NA	-15	True	ATTAAA	-18	NA	67857658	67798581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUST00000025421.9	chr18	+	3542	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	0	0	0	0	multi-exon	FALSE	canonical	3	1509	junction_8	173.331285043987	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGTCTTATAAAAAAG	NA	False	NA	19	True	AATAAA	-21	NA	67907945	67928557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUST00000025425.7	chr18	+	8093	46	FSM	ENSMUSG00000024542.10	ENSMUST00000025425.7	8093	46	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	30.2980747463157	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	107	False	NA	10	True	AATAAA	-19	NA	67933176	68018241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013821_68013949_68014354_68014414_68017809
ENSMUST00000025427.14	chr18	+	1852	10	FSM	ENSMUSG00000009535.14	ENSMUST00000025427.14	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	337.084266125157	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCAATTCTGAGACTC	NA	False	NA	87	True	AATAAA	-17	NA	68433470	68454977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUST00000025439.5	chr18	-	2638	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATGCCTTCTTTTGTA	371	False	NA	NA	False	AATAAA	-16	NA	73948509	73902973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ENSMUST00000025439.5-1	chr18	-	2512	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	-11	137	0	-137	multi-exon	FALSE	canonical	3	442	junction_8	47.5095312074909	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCAGTTACATTATCT	360	False	NA	0	True	AATAAA	-20	NA	73948520	73903110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ENSMUST00000025444.8	chr18	+	2620	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	0	0	0	0	multi-exon	TRUE	canonical	3	205	junction_6	27.3663729300567	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCTCTCTCTCAATAGT	NA	False	NA	14	True	AATAAA	-17	NA	74349201	74354564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ENSMUST00000025462.7	chr18	-	1377	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_3	30.0026665481587	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTGTGTATACGCAC	NA	False	NA	-3	True	AATAAA	-20	NA	80243873	80235479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
ENSMUST00000025463.14	chr18	+	1650	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	503.796475661441	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAGGAGTACACGTT	NA	False	NA	NA	False	AATAAA	-3	NA	80250081	80255938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
ENSMUST00000025464.8	chr18	+	517	4	FSM	ENSMUSG00000057130.13	ENSMUST00000025464.8	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	1036.43309265748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCACTGGCAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	80250077	80265417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80250277_80250368_80250559_80261918_80262023_80265393
ENSMUST00000025464.8-0	chr18	+	691	4	FSM	ENSMUSG00000057130.13	ENSMUST00000025464.8	517	4	150	-324	119	188	multi-exon	FALSE	canonical	3	221	junction_1	1036.43309265748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGATCTGCTGTGCTTA	NA	False	NA	8	True	AATAAA	-16	NA	80250227	80265741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80250277_80250368_80250559_80261918_80262023_80265393
ENSMUST00000025472.7	chr18	-	2017	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	12.1061967603372	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGACTTATTCTTTTT	NA	False	NA	-1	True	TATAAA	-16	NA	61840706	61829907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
ENSMUST00000025474.14	chr18	+	3567	12	FSM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_8	19.1691039293584	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63110901	63132521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ENSMUST00000025483.11	chr18	-	2687	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	0	0	0	0	multi-exon	FALSE	canonical	3	2259	junction_14	785.439045946889	3959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649679	64632728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ENSMUST00000025484.9	chr18	-	2059	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	95.9785212597583	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGCTGTGTACGCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	64622134	64590335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
ENSMUST00000025486.9	chr18	+	2843	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	0	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	118.73230394463	2197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	20	True	AATAAA	-19	NA	56840884	56886496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUST00000025488.15	chr18	-	2400	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTTCTGTTGGTAGTT	NA	False	NA	NA	False	NA	NA	NA	57108440	57088904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
ENSMUST00000025488.15-0	chr18	-	1135	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	0	1265	0	516	multi-exon	FALSE	canonical	3	74	junction_4	15.0228991875736	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAACATGTGTTTTTGTA	NA	False	NA	NA	False	TATAAA	-3	NA	57108440	57090169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
ENSMUST00000025490.10	chr18	+	5030	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTGCAATGATTTAAATG	NA	False	NA	12	True	AATAAA	-22	NA	57487812	57526028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUST00000025490.10-0	chr18	+	1680	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	5	3345	0	376	multi-exon	FALSE	canonical	3	500	junction_4	197.841121547064	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTCTTTTTACTGTCAT	NA	False	NA	NA	False	AATAAA	-35	NA	57487817	57522683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUST00000025503.10	chr18	+	3377	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	47.2175814713121	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGGGTCCTGTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	58792537	58813440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ENSMUST00000025505.7	chr18	+	3738	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTTTCACAAGTACT	NA	False	NA	34	True	AATAAA	-24	NA	60659272	60691838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ENSMUST00000025505.7-0	chr18	+	2207	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	17	1514	0	-687	multi-exon	FALSE	canonical	3	145	junction_9	21.4333592534835	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGCCCTGTTCTATAAA	NA	False	NA	14	True	ATTAAA	-17	NA	60659289	60690324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ENSMUST00000025506.7	chr18	+	2210	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_10	72.8288404411329	673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTAAGACTGGATTA	NA	False	NA	35	True	ATTAAA	-45	NA	60693807	60705882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ENSMUST00000025511.11	chr18	+	597	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	0	0	0	0	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907667	60911618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000025511.11-0	chr18	+	528	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	69	0	0	0	multi-exon	FALSE	canonical	3	20921	junction_1	2863.01274883644	2265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907736	60911618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000025515.7	chr18	+	4611	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTACCTTTAATATGTGT	4742	False	NA	25	True	AATAAA	-25	NA	90528277	90561391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ENSMUST00000025515.7-0	chr18	+	3503	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	50	1058	0	-1058	multi-exon	FALSE	canonical	3	189	junction_13	15.4033185457622	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGAGGATATTTT	4792	False	NA	45	True	ATTAAA	-18	NA	90528327	90560333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ENSMUST00000025520.10	chr18	-	3366	14	FSM	ENSMUSG00000052026.9	ENSMUST00000025520.10	3366	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	5.15671561910596	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACCTGACTCTGCTAC	NA	False	NA	-5	True	AATAAA	-19	NA	61147294	61128451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61129904_61133493_61133662_61134363_61134465_61134641_61134742_61135194_61135327_61135397_61135511_61136312_61136438_61136558_61136663_61137460_61137596_61138783_61138923_61140446_61140682_61140787_61140920_61142493_61142678_61147048
ENSMUST00000025521.9	chr18	-	1750	3	FSM	ENSMUSG00000024619.9	ENSMUST00000025521.9	1750	3	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_1	57.5	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCCATCCTTTCTCGT	7754	False	NA	-5	True	ATTAAA	-22	NA	61169271	61151933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61153014_61153445_61153592_61168747
ENSMUST00000025541.6	chr19	+	5644	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	6.07590871118606	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTGCTCTTCTTAAAA	NA	False	NA	20	True	AATAAA	-24	NA	16110194	16364827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ENSMUST00000025542.10	chr19	-	2617	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	0	0	0	0	multi-exon	TRUE	canonical	3	2829	junction_2	225.154079188008	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAAGGTGGAGTGGGTG	NA	False	NA	NA	False	TTTAAA	-44	NA	15902423	15882041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUST00000025542.10-0	chr19	-	1744	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	74	799	-55	-347	multi-exon	FALSE	canonical	3	2829	junction_2	225.154079188008	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGTGCATGACTGTC	NA	False	NA	-4	True	AATGAA	-19	NA	15902349	15882840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUST00000025546.17	chr18	-	2124	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_11	64.2627612178223	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGTGGTCTGACTTTCT	NA	False	NA	2	True	AATAAA	-25	NA	84703827	84685589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
ENSMUST00000025547.4	chr18	-	1321	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	0	1097	0	0	multi-exon	FALSE	canonical	3	52	junction_4	6.15142259969188	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTAAAAGCATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	84969649	84965412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
ENSMUST00000025561.8	chr19	-	1674	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	3.1446603773522	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCATTGTCTCTC	7005	False	NA	2	True	AATAAA	-23	NA	20368308	20350791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ENSMUST00000025562.9	chr19	-	3236	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_14	47.6890156590894	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCAGCAGTATGTCTTG	NA	False	NA	-3	True	NA	NA	NA	9876915	9849659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ENSMUST00000025563.8	chr19	+	929	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGATTGAGGAT	4869	False	NA	23	True	AATAAA	-21	NA	9960009	9962462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUST00000025563.8-0	chr19	+	865	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	58	6	0	0	multi-exon	FALSE	canonical	3	5325	junction_2	217.148694574836	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTCTTTGTGATT	4927	False	NA	17	True	AATAAA	-15	NA	9960067	9962456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUST00000025567.9	chr19	-	3150	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	0	0	0	0	multi-exon	TRUE	canonical	3	359	junction_1	25.8738196920081	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTGTAGTTCAGCAAG	9871	False	NA	-4	True	AATAAA	-25	NA	10079110	10040128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
ENSMUST00000025568.3	chr19	-	1590	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	27.5896266738062	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1510	False	NA	-4	True	AATAAA	-15	NA	10554726	10547841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
ENSMUST00000025570.8	chr19	-	1941	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	-67	1107	0	0	multi-exon	FALSE	canonical	3	201	junction_1	14.7196014438797	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTGTTTGATCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	10502546	10479004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ENSMUST00000025590.11	chr19	+	4488	14	FSM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	15.1325504406969	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTCTGATTTGCTTC	NA	False	NA	9	True	ATTAAA	-16	NA	11943304	11971476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ENSMUST00000025595.5	chr19	+	3267	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	5.90668171555645	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTCTTTAGTTATT	NA	False	NA	4	True	AATAAA	-13	NA	12550886	12567126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUST00000025617.4	chr19	+	2482	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_3	47.0744091837593	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAATCCTGTATCTGTTT	1324	False	NA	19	True	AATAAA	-34	NA	17371406	17378713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ENSMUST00000025631.7	chr19	-	2726	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAATTTTGTGTCACTG	NA	False	NA	NA	False	TTTAAA	-4	NA	18609153	18556691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ENSMUST00000025631.7-0	chr19	-	1279	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	-34	1481	0	0	multi-exon	FALSE	canonical	3	989	junction_2	42.8315679128904	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTTTGTGCTATCACT	NA	False	NA	-2	True	AATAAA	-21	NA	18609187	18558172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ENSMUST00000025632.11	chr19	+	4518	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTCTCACAGCTTCAC	NA	False	NA	16	True	NA	NA	NA	18648127	18684564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ENSMUST00000025632.11-1	chr19	+	2106	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	0	2412	0	566	multi-exon	FALSE	canonical	3	696	junction_5	231.025928397305	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTCGAATTAGAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	18648127	18682152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ENSMUST00000025639.7	chr19	-	3003	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACCTTGCTCCGGGAG	NA	False	NA	NA	False	ATTAAA	-22	NA	10926630	10918844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ENSMUST00000025639.7-0	chr19	-	1684	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	0	1319	0	-1319	multi-exon	FALSE	canonical	3	231	junction_1	21.483844059096	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCTTCAGCTGTGAATT	NA	False	NA	-95	True	AAAACA	-7	NA	10926630	10920163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ENSMUST00000025642.14	chr19	+	2134	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	13.7346277707115	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	15	True	ATTAAA	-21	NA	10872594	10882896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ENSMUST00000025645.14	chr19	-	3657	11	FSM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	9.57131129992124	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGACACTCTCTGTC	NA	False	NA	1	True	AATAAA	-27	NA	10847304	10835185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ENSMUST00000025649.10	chr19	+	4459	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	0	0	0	0	multi-exon	FALSE	canonical	3	2606	junction_4	266.254060724097	6629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	370	False	NA	56	True	AATAAA	-16	NA	10582690	10607183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUST00000025651.6	chr19	-	2341	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2030	False	NA	NA	False	AATAAA	-14	NA	10181432	10176501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10178462_10181051
ENSMUST00000025663.8	chr19	+	6602	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	16.2129029807244	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTCAGATTCTAGCTTT	NA	False	NA	53	True	NA	NA	NA	21755721	21835724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ENSMUST00000025668.9	chr19	+	1968	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	0	2400	0	0	multi-exon	FALSE	canonical	3	31	junction_6	6.18409698788397	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTGGAAGCAGTTC	NA	False	NA	NA	False	AATAAA	-32	NA	7471802	7511565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ENSMUST00000025675.11	chr19	-	3231	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	30.7431757816732	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218548	7203037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ENSMUST00000025679.11	chr19	-	1713	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	0	0	0	0	multi-exon	TRUE	canonical	3	1089	junction_1	76.373351955305	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTGGCCCATGCATC	NA	False	NA	2	True	AATAAA	-26	NA	7183681	7175566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ENSMUST00000025679.11-0	chr19	-	987	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	82	644	0	-636	multi-exon	FALSE	canonical	3	1089	junction_1	76.373351955305	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTGTGCGCTTCCCT	NA	False	NA	-7	True	ATTAAA	-18	NA	7183599	7176210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ENSMUST00000025684.4	chr19	+	3353	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATGCTCCCTTGTCTTT	NA	False	NA	16	True	ATTAAA	-24	NA	6326754	6350126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
ENSMUST00000025684.4-0	chr19	+	1955	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	200	1198	0	538	multi-exon	FALSE	canonical	3	357	junction_1	38.2687862363049	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTTCTTGCCTCTT	NA	False	NA	17	True	AATATA	-14	NA	6326954	6348928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
ENSMUST00000025694.7	chr19	-	2768	11	FSM	ENSMUSG00000024766.16	ENSMUST00000025694.7	2768	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	12.0498962651137	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCAGTTTTCTGTTTCT	NA	False	NA	-8	True	NA	NA	NA	33739351	33532566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33738997
ENSMUST00000025695.10	chr19	-	2742	14	FSM	ENSMUSG00000024777.11	ENSMUST00000025695.10	2742	14	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_11	13.4199357135648	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTTTATTGAG	NA	False	NA	0	True	AATAAA	-14	NA	6285902	6277794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ENSMUST00000025696.5	chr19	-	2809	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	7.58287544405155	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGGCTGTCTCCATGTT	NA	False	NA	-1	True	AATAAA	-16	NA	29025361	28998232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
ENSMUST00000025702.14	chr19	-	1635	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	6.49018096662888	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCCATTTGCTTATTA	NA	False	NA	1	True	NA	NA	NA	6178334	6169428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
ENSMUST00000025704.3	chr19	+	2024	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	42.0218990527558	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAGACTGCTTTTTATT	NA	False	NA	35	True	AATAAA	-20	NA	6135012	6141807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ENSMUST00000025707.9	chr19	-	1287	8	FSM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_7	142.172789382555	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAAGCAGCTTTTTC	6440	False	NA	NA	False	AATAAA	-18	NA	6134973	6130791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ENSMUST00000025711.13	chr19	-	2675	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	16.3026923475166	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAGAGCAGCAGCTTT	987	False	NA	NA	False	TTTAAA	-7	NA	6127261	6117871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ENSMUST00000025713.12	chr19	-	1471	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	30.8704981223334	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9961	False	NA	0	True	AATAAA	-15	NA	6117872	6112850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ENSMUST00000025714.9	chr19	+	1145	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_4	72.6416547168359	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTTAAATTTTACTA	NA	False	NA	NA	False	AATAAA	-26	NA	36061130	36082177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ENSMUST00000025728.13	chr19	-	2920	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	0	1584	0	-1584	multi-exon	FALSE	canonical	3	167	junction_1	18.6118241986109	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTTCCTATCACTG	4335	False	NA	-7	True	AATAAA	-14	NA	5925302	5901313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ENSMUST00000025729.12	chr19	+	6481	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_17	101.711420291683	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTCTTGATTGTGCCT	NA	False	NA	16	True	AATAAA	-22	NA	36811631	36870877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ENSMUST00000025732.14	chr19	+	2480	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.63818119165458	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGATGATCCCTTTCTGT	2866	False	NA	NA	False	AATAAA	-17	NA	5927844	5935794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
ENSMUST00000025739.14	chr19	+	3536	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	27.709124048868	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4085	False	NA	25	True	AATAAA	-15	NA	30007912	30071122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ENSMUST00000025740.8	chr19	-	2081	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_4	40.0660704337224	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5998	False	NA	0	True	AATAAA	-15	NA	4251635	4245194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ENSMUST00000025743.7	chr19	+	802	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	0	0	0	0	multi-exon	FALSE	canonical	3	1715	junction_6	72.3058703625708	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGACTTGCTGTTAAA	7371	False	NA	13	True	NA	NA	NA	3333059	3341201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
ENSMUST00000025749.15	chr19	-	1758	15	FSM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	24	2804	0	0	multi-exon	FALSE	canonical	2	38	junction_6	17.8245416691225	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2773	False	NA	-2	True	AGTAAA	-14	NA	4213329	4206793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ENSMUST00000025751.11	chr19	-	3683	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	38	1848	0	0	multi-exon	FALSE	canonical	3	43	junction_2	8.84936294259626	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTTGTGTTGGAGGT	NA	False	NA	0	True	ATTAAA	-17	NA	3332979	3310923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ENSMUST00000025752.15	chr19	-	2421	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_17	37.0964328301216	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCTTTTTTTTTTCC	1626	False	NA	0	True	AATAAA	-21	NA	6014230	5990569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ENSMUST00000025755.11	chr19	+	2340	5	FSM	ENSMUSG00000024837.16	ENSMUST00000025755.11	2340	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	4.08503365959205	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTGTGTATATTTG	NA	False	NA	12	True	AATAAA	-20	NA	25482981	25581693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_25483566_25487043_25487228_25523182_25523467_25537230_25537376_25580550
ENSMUST00000025759.9	chr19	+	2556	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	0	0	0	0	multi-exon	TRUE	canonical	3	703	junction_2	59.7581793564697	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTATGAAGAGTT	1792	False	NA	23	True	AATAAA	-40	NA	5416768	5421554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUST00000025759.9-0	chr19	+	997	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	281	1278	0	-1278	multi-exon	FALSE	canonical	3	703	junction_2	59.7581793564697	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTCTGAGTGGCTC	2073	False	NA	22	True	ATTAAA	-22	NA	5417049	5420276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUST00000025760.13	chr19	+	2319	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	51.157187679149	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTCAGACTGTTACCC	6023	False	NA	1	True	AATAAA	-12	NA	3902075	3944364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ENSMUST00000025762.16	chr19	-	697	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	562	2	0	0	multi-exon	FALSE	canonical	3	4588	junction_2	727	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8743	False	NA	-8	True	AATAAA	-15	NA	5416634	5414667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5415187_5415845_5415985_5416595
ENSMUST00000025767.14	chr19	-	1261	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	15.3310143173894	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTTGCAGAACTAATC	3902	False	NA	-21	True	TATAAA	-17	NA	4171575	4164463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ENSMUST00000025773.5	chr19	+	913	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCTTACATCTCTTA	NA	False	NA	6	True	AATAAA	-18	NA	4281952	4283688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
ENSMUST00000025774.11	chr19	-	3222	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	1448	junction_15	340.757138589935	2619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3866	False	NA	-25	True	AATAAA	-18	NA	5345483	5323959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUST00000025778.9	chr19	-	3767	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	0	0	0	0	multi-exon	FALSE	canonical	1	455	junction_4	183.478351735445	2871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	False	NA	-7	True	AATAAA	-16	NA	30152829	30075846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ENSMUST00000025779.11	chr19	+	1080	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTCTGTGTGTGGTT	6876	False	NA	34	True	AATAAA	-23	NA	4147181	4149017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
ENSMUST00000025779.11-0	chr19	+	917	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	165	-2	-54	0	multi-exon	FALSE	canonical	3	620	junction_3	36.1754981536767	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTGTGTGTGGTTCC	7041	False	NA	36	True	AATAAA	-25	NA	4147346	4149019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
ENSMUST00000025786.9	chr19	-	4869	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_19	9.30455099331212	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTTGTTATCTTCGAT	NA	False	NA	NA	False	AATAAA	-25	NA	5323147	5183185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ENSMUST00000025791.12	chr19	-	3182	22	FSM	ENSMUSG00000024858.15	ENSMUST00000025791.12	3182	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	77.6089973043399	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGCTGTCTCAGACTC	NA	False	NA	-8	True	TATAAA	-14	NA	4355983	4336028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355149_4355222_4355929
ENSMUST00000025798.13	chr19	-	2940	16	FSM	ENSMUSG00000024862.17	ENSMUST00000025798.13	2940	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.1779444929265	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	-1	True	AATAAA	-18	NA	5168328	5157773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160287_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168149
ENSMUST00000025800.15	chr19	-	2573	15	FSM	ENSMUSG00000024867.15	ENSMUST00000025800.15	2573	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	5.473498303048	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTCATACATTGATTC	NA	False	NA	0	True	AATAAA	-16	NA	24533236	24272157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24272919_24281395_24281511_24323600_24323746_24327497_24327654_24332481_24332567_24335393_24335443_24335574_24335659_24337303_24337516_24356165_24356466_24359051_24359205_24367707_24367826_24374379_24374511_24416416_24416486_24420965_24421053_24533128
ENSMUST00000025802.10	chr19	+	787	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	10.4243305140746	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGCATCTTCCGTGT	3513	False	NA	9	True	ATTAAA	-18	NA	4050579	4052103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
ENSMUST00000025804.7	chr19	-	1913	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	0	0	0	0	multi-exon	FALSE	canonical	3	994	junction_1	78.6628247649422	1178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGGTGACTGAGTGTGG	1501	False	NA	0	True	AATAAA	-43	NA	5157100	5149232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
ENSMUST00000025805.8	chr19	-	1343	6	FSM	ENSMUSG00000024873.8	ENSMUST00000025805.8	1343	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	5.2687759489278	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAATTCTGCTTCTGGA	NA	False	NA	0	True	AATAAA	-18	NA	5148549	5142895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5143526_5143699_5143844_5143947_5144061_5144311_5144360_5144759_5144829_5148210
ENSMUST00000025811.6	chr19	+	1488	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTATTCATATTTTGTC	NA	False	NA	NA	False	GGGGCT	-14	NA	5138572	5142909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ENSMUST00000025811.6-0	chr19	+	1097	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	15	376	0	0	multi-exon	FALSE	canonical	3	484	junction_7	32.2509294281512	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTGACCCTGGTTCC	NA	False	NA	26	True	NA	NA	NA	5138587	5142533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ENSMUST00000025815.10	chr19	-	1929	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTGTGATGGTACTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	24938965	24897279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUST00000025815.10-0	chr19	-	1414	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	0	515	0	-515	multi-exon	FALSE	canonical	3	171	junction_14	17.2858618647773	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATATCCTCTGGAGGT	NA	False	NA	-36	True	AGTAAA	-28	NA	24938965	24897794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUST00000025818.8	chr19	+	4184	10	FSM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	7.87557562074193	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCTTGATAACTAGAA	NA	False	NA	4	True	NA	NA	NA	5100860	5107099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUST00000025823.6	chr19	-	1425	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_6	48.136286113662	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	False	NA	-13	True	ATTAAA	-17	NA	4675668	4672622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUST00000025827.10	chr19	+	2613	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_4	28.9687331445474	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTGCACTCATTGAAAT	NA	False	NA	23	True	AATAAA	-30	NA	32463168	32492764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
ENSMUST00000025834.15	chr19	-	4110	7	FSM	ENSMUSG00000024901.16	ENSMUST00000025834.15	4110	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.01386965216377	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTGGTAAAGGACTTCA	8706	False	NA	NA	False	NA	NA	NA	4993155	4979744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986248_4988076_4988207_4991787_4991941_4992965
ENSMUST00000025835.6	chr19	+	4317	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	0	0	0	0	multi-exon	TRUE	canonical	3	230	junction_1	37.3718386086055	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	False	NA	18	True	AATAAA	-20	NA	3373284	3435733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ENSMUST00000025836.6	chr19	+	774	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	216	2055	0	0	multi-exon	FALSE	canonical	3	572	junction_2	14.5859521458148	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCTCAGCTTCTCTCC	3759	False	NA	10	True	AATAAA	-13	NA	5012390	5014972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUST00000025840.16	chr19	+	1762	9	FSM	ENSMUSG00000024905.16	ENSMUST00000025840.16	2234	9	28	444	0	90	multi-exon	FALSE	canonical	1	2	junction_6	4.715334028465	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTTGTTATGTGTTTG	NA	False	NA	NA	False	CATAAA	-16	NA	3438884	3457379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3439334_3442102_3442262_3443924_3444046_3445919_3445994_3446962_3447055_3452485_3452577_3454048_3454187_3454932_3455109_3456917
ENSMUST00000025842.8	chr19	-	672	6	FSM	ENSMUSG00000024907.8	ENSMUST00000025842.8	672	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.0591260281974	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTAGCAAGTATCTGG	NA	False	NA	NA	False	NA	NA	NA	3464447	3459931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3460164_3461128_3461207_3461557_3461648_3463294_3463350_3464031_3464113_3464311
ENSMUST00000025846.16	chr19	-	4841	23	FSM	ENSMUSG00000024908.16	ENSMUST00000025846.16	4841	23	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	88.0225482945391	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCGTGAGCCTTTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	3625720	3504927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ENSMUST00000025847.7	chr19	+	1215	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	35.2423706830007	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGGTCCTTGTTCCA	NA	False	NA	15	True	AATAAA	-15	NA	5510656	5515077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ENSMUST00000025851.4	chr19	-	2683	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	0	0	0	0	multi-exon	TRUE	canonical	3	495	junction_17	96.7659038009169	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATGTTTCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	4978315	4957256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ENSMUST00000025853.16	chr19	-	992	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_1	76.7282361469506	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	5475007	5472838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUST00000025856.17	chr19	-	5161	23	FSM	ENSMUSG00000024913.17	ENSMUST00000025856.17	5161	23	0	0	0	0	multi-exon	TRUE	canonical	2	72	junction_10	15.3130555220533	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCATTCCTTTGTGCCT	7827	False	NA	0	True	TATAAA	-20	NA	3736556	3634827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3635292_3636382_3636481_3640973_3641114_3641615_3641853_3643515_3643627_3647243_3647481_3650672_3650799_3652234_3652445_3654001_3654193_3655285_3655495_3660038_3660239_3662197_3662522_3664225_3664411_3665652_3665880_3670014_3670305_3672509_3672727_3678272_3678445_3680073_3680471_3697527_3697660_3699403_3699601_3702132_3702331_3709243_3709641_3736354
ENSMUST00000025862.15	chr19	+	5921	33	FSM	ENSMUSG00000024921.18	ENSMUST00000025862.15	5921	33	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.35245494715881	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCTTTTCTTTTA	NA	False	NA	63	True	AATAAA	-18	NA	26582451	26755721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ENSMUST00000025864.11	chr19	+	607	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	14	505	0	0	multi-exon	FALSE	canonical	3	228	junction_3	35.9845645921816	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGTCTGTGGGCA	5059	False	NA	4	True	AATAAA	-13	NA	5651914	5652962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
ENSMUST00000025867.6	chr19	+	2716	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	8.59069263796581	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGAGTAGCTGTCTTT	NA	False	NA	10	True	AATAAA	-16	NA	5687510	5698158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ENSMUST00000025875.5	chr19	+	3800	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCTCTCATCTGT	NA	False	NA	17	True	AATAAA	-27	NA	28812473	28891360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ENSMUST00000025875.5-0	chr19	+	2417	12	FSM	ENSMUSG00000024935.12	ENSMUST00000025875.5	3800	12	61	1322	0	0	multi-exon	FALSE	canonical	3	74	junction_8	5.75246982529323	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCAGCTTCCCTTGTACT	NA	False	NA	4	True	AATGAA	-15	NA	28812534	28890038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_28812733_28856412_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ENSMUST00000025885.6	chr19	-	699	4	FSM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	15.6276108929747	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTCTTTCTTGGTTCT	NA	False	NA	3	True	AAAACA	-17	NA	5781755	5780330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
ENSMUST00000025890.10	chr19	-	2586	17	FSM	ENSMUSG00000024941.10	ENSMUST00000025890.10	2586	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	68.5770552007011	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9907	False	NA	-11	True	AATAAA	-13	NA	5821429	5808454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000025891.11	chr19	-	3062	22	FSM	ENSMUSG00000024942.20	ENSMUST00000025891.11	3062	22	0	0	0	0	multi-exon	TRUE	canonical	2	82	junction_11	40.0795693849892	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTCTGGGTGTTAT	2594	False	NA	-6	True	AATAAA	-14	NA	6065236	6038572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ENSMUST00000025893.7	chr19	-	875	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	408	3	0	0	multi-exon	FALSE	canonical	3	648	junction_1	48.4890451545501	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	False	NA	-11	True	AATAAA	-15	NA	6191170	6184415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
ENSMUST00000025897.13	chr19	+	2866	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	31	1747	0	0	multi-exon	FALSE	canonical	3	17	junction_1	5.41455240361839	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACTAGTCTCTCTGAG	1422	False	NA	10	True	ATTAAA	-14	NA	6391220	6403898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ENSMUST00000025904.12	chr19	-	1262	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_5	11.3912246927185	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6887474	6884073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ENSMUST00000025906.12	chr19	-	2241	7	FSM	ENSMUSG00000024955.16	ENSMUST00000025906.12	2241	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	9.26762584963856	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGGTCGGTGAGTCA	9685	False	NA	-1	True	AATATA	-16	NA	6899176	6888345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898989
ENSMUST00000025910.13	chr19	+	1452	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	43.6526695123626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTATCCTTCGTTTGGG	8681	False	NA	16	True	AATAAA	-21	NA	6919228	6929267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
ENSMUST00000025912.10	chr19	-	4257	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_24	50.7714377272191	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4311	False	NA	-8	True	AATAAA	-16	NA	6947182	6931080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ENSMUST00000025914.7	chr19	-	1281	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	52.2323867176508	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4758	False	NA	-1	True	GATAAA	-17	NA	6965019	6959840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ENSMUST00000025915.13	chr19	-	1074	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	27.3978101314685	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9276	False	NA	-4	True	AATAAA	-17	NA	6969871	6965278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
ENSMUST00000025918.9	chr19	-	2108	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	0	0	0	0	multi-exon	FALSE	canonical	3	2912	junction_9	209.620169317304	4502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUST00000025921.15	chr19	-	3018	18	FSM	ENSMUSG00000024969.16	ENSMUST00000025921.15	3018	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.565869249268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	3138	False	NA	NA	False	AAGAAA	-13	NA	7272812	7254123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7272402
ENSMUST00000025924.4	chr19	-	3152	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGTCTCTAGGTGCTT	NA	False	NA	NA	False	NA	NA	NA	7360359	7333827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ENSMUST00000025924.4-0	chr19	-	1929	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	0	1223	0	0	multi-exon	FALSE	canonical	3	309	junction_2	10.2293694820355	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGGGCTATCATT	NA	False	NA	NA	False	AATAAA	-21	NA	7360359	7335050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ENSMUST00000025925.11	chr19	+	767	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	0	2756	0	-922	multi-exon	TRUE	canonical	3	141	junction_1	31.8825971338597	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGAGGATACTGCAG	NA	False	NA	13	True	AATAAA	-15	NA	7534823	7563154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ENSMUST00000025930.10	chr19	+	4851	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	0	0	0	0	multi-exon	FALSE	non_canonical	3	891	junction_13	92.0610586535271	2062	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGTGTGTAATTCATCA	NA	False	NA	NA	False	CATAAA	-14	NA	53588828	53634264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ENSMUST00000025931.14	chr19	+	2381	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	6.73954654285478	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGTGCATTTATTGTG	468	False	NA	22	True	AATAAA	-27	NA	53891729	53918291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
ENSMUST00000025932.9	chr19	+	3965	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	123.021784148174	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	3932	False	NA	21	True	TATAAA	-24	NA	53933310	54021562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUST00000025944.9	chr19	+	1802	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	4.18993502999218	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGCACGCGTGT	NA	False	NA	79	True	NA	NA	NA	37423257	37429179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
ENSMUST00000025955.8	chr19	-	5125	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	309.066534016512	2446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8754	False	NA	-31	True	AATAAA	-17	NA	60779081	60749554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ENSMUST00000025957.9	chr19	+	2307	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	50.1458809375207	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800048	60824665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUST00000025961.7	chr19	-	1478	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_4	52.5148127251308	524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGGCACCGTTTCTCC	1447	False	NA	-1	True	AATAAA	-34	NA	60862994	60852488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
ENSMUST00000025963.8	chr19	-	3977	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTAGTCTTACGAGGTT	2288	False	NA	NA	False	AATAAA	-17	NA	38807681	38776571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ENSMUST00000025963.8-0	chr19	-	2972	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	0	1005	0	-1005	multi-exon	FALSE	canonical	3	233	junction_1	18.6711006638602	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCATGGTTTTTTTTT	2288	False	NA	-7	True	AATAAA	-22	NA	38807681	38777576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ENSMUST00000025965.12	chr19	+	5868	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_5	143.18806117019	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATGACTTCATCCCA	NA	False	NA	NA	False	AAGAAA	-5	NA	38919358	38959495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ENSMUST00000025965.12-0	chr19	+	3097	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	0	2771	0	-2771	multi-exon	TRUE	canonical	3	1554	junction_5	143.18806117019	2229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919358	38956724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ENSMUST00000025979.13	chr19	-	3527	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_12	98.5252364738204	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576907	40538700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUST00000025981.15	chr19	-	2743	14	FSM	ENSMUSG00000025008.16	ENSMUST00000025981.15	2743	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	4.39337855732112	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGACTTTTTTTCTTG	NA	False	NA	-1	True	CATAAA	-17	NA	40600677	40584889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_40585987_40591248_40591387_40593749_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ENSMUST00000025983.13	chr19	+	3819	6	FSM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	5.32916503778969	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTGCTGCTTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	40819722	40837016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833488_40833649_40834142
ENSMUST00000025997.7	chr19	-	1948	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	26.9102211064867	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGTGTGTTAACAAAG	NA	False	NA	-8	True	AATAAA	-17	NA	53379009	53367826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUST00000025998.15	chr19	+	2281	6	FSM	ENSMUSG00000025025.15	ENSMUST00000025998.15	5036	6	238	2517	0	0	multi-exon	FALSE	canonical	3	12	junction_1	85.2478738737806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGAGTTGTGTGTTAATGT	4697	False	NA	18	True	AATAAA	-23	NA	53318126	53361724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53318237_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ENSMUST00000026008.9	chr19	+	3580	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	429.31275312993	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGGCCCAATGGGACAC	NA	False	NA	NA	False	AATAAA	-21	NA	46490140	46505287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ENSMUST00000026009.10	chr19	-	843	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	35.3870032639103	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAAATGTCTCAGAGCA	NA	False	NA	-21	True	AATAAA	-35	NA	46561532	46519534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ENSMUST00000026011.8	chr19	+	1612	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	0	1593	0	-1593	multi-exon	FALSE	canonical	3	36	junction_10	6.85384611817119	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCACCAAAACAAATCAACAA	NA	False	NA	NA	False	NA	NA	NA	46561805	46583741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ENSMUST00000026013.6	chrX	+	4167	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGGCTTCTCTGATTTG	NA	False	NA	21	True	AATAAA	-22	NA	16485936	16554057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ENSMUST00000026013.6-0	chrX	+	1959	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	134	2074	134	-2074	multi-exon	FALSE	canonical	3	197	junction_7	23.3440330181188	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGTAGCATCCAATG	NA	False	NA	10	True	AATAAA	-20	NA	16486070	16551983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ENSMUST00000026016.13	chrX	-	1983	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_3	21.435951110226	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGTGCTTATATATCC	NA	False	NA	-9	True	AATAAA	-21	NA	17438564	17422802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ENSMUST00000026027.7	chr19	+	3260	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	39.3161544406367	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGTACAAATTGAGTA	NA	False	NA	15	True	AATAAA	-27	NA	47056184	47071918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ENSMUST00000026032.7	chr19	-	2159	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_3	49.2396507895471	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTGTGTTGACATA	NA	False	NA	-19	True	AATAAA	-17	NA	47039343	47022055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ENSMUST00000026036.5	chrX	+	1808	2	FSM	ENSMUSG00000025056.5	ENSMUST00000026036.5	1808	2	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_1	0	1019	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTGGAGAGTTTTCTTG	NA	False	NA	11	True	AATAAA	-23	NA	85235369	85239553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_85236581_85238956
ENSMUST00000026039.15	chrX	-	3487	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	195	658	0	-658	multi-exon	TRUE	canonical	3	19	junction_1	33.6576812358314	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820230	84746200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUST00000026043.12	chr19	+	7278	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_7	39.0368471130284	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568116	47633685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ENSMUST00000026050.8	chr19	+	1182	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	32.103582354622	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTCCAAACCACCTCAG	8468	False	NA	21	True	ATTAAA	-30	NA	47843408	47853229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ENSMUST00000026062.10	chr19	+	2350	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6.36177822799744	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGACTGGTCCGGTCTG	NA	False	NA	14	True	ATTAAA	-15	NA	56385560	56430776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
ENSMUST00000026073.14	chr19	+	3789	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAGTTCTTTGCAGTAAG	NA	False	NA	18	True	AATAAA	-18	NA	57441343	57479437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ENSMUST00000026073.14-0	chr19	+	1667	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	27	2095	0	1893	multi-exon	FALSE	canonical	3	146	junction_6	27.9131305507436	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCTCCTGCCTGTTCGTT	NA	False	NA	13	True	ATTAAA	-2	NA	57441370	57477342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ENSMUST00000026092.9	chr7	-	887	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTAGCAGTTTCGAGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	81439226	81431929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ENSMUST00000026092.9-0	chr7	-	775	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	9	103	0	-103	multi-exon	FALSE	canonical	0	0	junction_4	120.296508677517	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTAATGTCAGTTATT	NA	False	NA	-2	True	AGTAAA	-16	NA	81439217	81432032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ENSMUST00000026093.9	chr7	-	3001	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_4	90.4076933695809	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479179	81441821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ENSMUST00000026122.11	chr11	-	2861	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	0	0	0	0	multi-exon	FALSE	canonical	3	1798	junction_7	89.3174674965653	2948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGCTGCTTTATTTT	3367	False	NA	-4	True	AATAAA	-21	NA	120464079	120451123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUST00000026125.3	chr11	-	3527	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	0	0	0	0	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATCACACCTCGTCTCT	4306	False	NA	3	True	AATAAA	-29	NA	120489191	120482946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ENSMUST00000026125.3-0	chr11	-	1139	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	0	2388	0	0	multi-exon	FALSE	canonical	3	3672	junction_5	281.391257859941	2412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	4306	False	NA	-7	True	AATAAA	-19	NA	120489191	120485334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ENSMUST00000026126.10	chr7	+	3240	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_9	43.027187253819	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCTGTTCTAGTTTCTG	933	False	NA	25	True	AATAAA	-13	NA	97130162	97190601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ENSMUST00000026128.10	chr11	+	596	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	111	2522	0	-100	multi-exon	FALSE	canonical	3	903	junction_1	470.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGCTGGAGGCCTCTGC	4011	False	NA	29	True	AGTAAA	-18	NA	120489357	120496502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120489431_120490067_120490195_120496106
ENSMUST00000026129.16	chr11	-	1881	14	FSM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	79.5574296680368	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508762	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ENSMUST00000026133.15	chr11	-	1861	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_7	93.9428832116752	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCCCAGAGCTCCAGTC	NA	False	NA	-16	True	AATAAA	-13	NA	120534574	120530241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ENSMUST00000026135.15	chr11	+	1820	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_3	62.8477525453377	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTTTCTTTTCTGCAG	NA	False	NA	16	True	AATAAA	-20	NA	120563817	120600273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000026139.14	chr11	+	2492	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_12	7.88805763716247	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTCCAGTTCCTTTCT	6064	False	NA	NA	False	GATAAA	-1	NA	120604750	120611954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ENSMUST00000026142.8	chrX	-	2821	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_10	166.264514821681	2077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585749	93579079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ENSMUST00000026144.5	chr11	-	892	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	11.7438650940369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGATCTGTGCTATCTG	9984	False	NA	-4	True	AATAAA	-37	NA	120618107	120616224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ENSMUST00000026150.15	chr19	-	5103	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	42.9826026693522	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4527	False	NA	NA	False	ATTAAA	-17	NA	41790486	41755026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ENSMUST00000026154.9	chr19	+	1821	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_7	37.0513157661101	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTTCTCTGTGCCTCG	4139	False	NA	18	True	AATAAA	-24	NA	41921928	41932543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUST00000026156.8	chr11	-	2118	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	23.1137382947714	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTGGCTCCTCTTGTC	NA	False	NA	-6	True	AGTAAA	-17	NA	120675033	120671573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ENSMUST00000026159.6	chr11	-	982	4	FSM	ENSMUSG00000025163.7	ENSMUST00000026159.6	982	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTTTTTGTTGCTTT	7896	False	NA	NA	False	AATAAA	-22	NA	120930244	120927572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120927977_120928505_120928643_120928861_120929177_120930118
ENSMUST00000026169.7	chr11	-	1308	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_7	19.9483708607996	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGATCTGGGCGCTGC	NA	False	NA	-7	True	AGTAAA	-41	NA	121095537	121068416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
ENSMUST00000026170.3	chr19	+	1529	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	5.5	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTAGCACATGACTTCC	NA	False	NA	10	True	AATAAA	-16	NA	41970201	42023082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_41970448_42020327_42020556_42022027
ENSMUST00000026173.13	chr11	-	2321	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	31.7350139610984	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGCCATATGTAATG	NA	False	NA	1	True	AATAAA	-33	NA	121245271	121218049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ENSMUST00000026188.10	chr19	+	4112	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTACATGTTACCTTAT	NA	False	NA	NA	False	NA	NA	NA	42507197	42580782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ENSMUST00000026188.10-0	chr19	+	3100	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	39	973	0	360	multi-exon	FALSE	canonical	3	76	junction_3	8.08290376865476	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTATGGTGTTTATAAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	42507236	42579809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ENSMUST00000026190.14	chr19	-	3738	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_12	2.28124563181019	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATAGATGCTCGCA	NA	False	NA	NA	False	NA	NA	NA	42601252	42582420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
ENSMUST00000026194.15	chr19	-	2647	19	FSM	ENSMUSG00000025188.16	ENSMUST00000026194.15	2647	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	30.4347612337936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	407	False	NA	-3	True	AATAAA	-19	NA	42767086	42743634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766678_42766992
ENSMUST00000026196.14	chr19	-	2058	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_5	49.6934351801121	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	8317	False	NA	-3	True	NA	NA	NA	43513044	43488190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUST00000026210.5	chr19	-	1446	9	FSM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	382	0	382	0	multi-exon	FALSE	canonical	3	15	junction_8	10.3191266587827	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCCACTTGCATGCCT	6244	False	NA	3	True	ATTAAA	-22	NA	43974613	43944745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241_43969439_43974504
ENSMUST00000026217.11	chr19	-	3502	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	31.5901883501824	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	44095919	44061773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ENSMUST00000026218.7	chr19	-	2172	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	15	1394	0	0	multi-exon	FALSE	canonical	3	133	junction_12	11.4813973542901	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGGCTGACAGATGTC	NA	False	NA	-13	True	AATAGA	-14	NA	44124300	44098469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ENSMUST00000026221.7	chr19	+	5455	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	0	0	0	0	multi-exon	FALSE	canonical	3	2597	junction_1	100.817458805507	6684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	1067	False	NA	22	True	AATAAA	-23	NA	44282112	44295303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ENSMUST00000026222.11	chr19	-	680	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	4404	junction_1	502.944517317765	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCTTTCTCCAGG	1974	False	NA	-7	True	AATAAA	-29	NA	44543879	44538678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ENSMUST00000026227.3	chr19	+	3488	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	30.3593066455741	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	2553	False	NA	26	True	AATGAA	-19	NA	44994996	45001201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ENSMUST00000026239.7	chr19	-	2324	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	11.9973955507018	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGCTGTCTGTGAGCT	NA	False	NA	2	True	AATAAA	-19	NA	45548970	45540713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
ENSMUST00000026243.5	chr19	-	5057	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_7	84.8678973464054	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5476	False	NA	-12	True	AATAAA	-13	NA	45771990	45738697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ENSMUST00000026252.14	chr19	-	1718	11	FSM	ENSMUSG00000025223.16	ENSMUST00000026252.14	1718	11	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	132.738992010637	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGGTAAAATTCTGGGC	7018	False	NA	-126	True	GGGGCT	-35	NA	46033353	46021127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ENSMUST00000026254.14	chr19	+	6450	40	FSM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_33	16.0207377114128	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCGCTGATTTTC	9051	False	NA	19	True	AATAAA	-19	NA	46140947	46274949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUST00000026256.9	chr19	+	1348	4	FSM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.08248290463863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGGTGCATAGGGGAC	6313	False	NA	9	True	AATAAA	-18	NA	46316622	46318885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46316966_46317113_46317268_46317526_46318033_46318540
ENSMUST00000026259.16	chr19	-	1380	4	FSM	ENSMUSG00000025229.16	ENSMUST00000026259.16	1380	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.62466929133727	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGATGATTCAGACTTG	NA	False	NA	NA	False	AATAAA	-19	NA	46136765	46124123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46125045_46125421_46125625_46125803_46125934_46136639
ENSMUST00000026262.8	chr9	+	1996	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_8	84.5408762866438	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446822	59472392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUST00000026265.8	chr9	-	2518	16	FSM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_2	13.5581054068119	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGATCACTGTCTGTCTT	NA	False	NA	-18	True	AATAAA	-2	NA	59260791	59229272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ENSMUST00000026266.9	chr9	+	2464	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_6	118.522032644662	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATCCTAAGTCTAATTGA	NA	False	NA	15	True	ATTAAA	-16	NA	59198854	59223479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
ENSMUST00000026269.4	chr9	+	4848	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	3.69776545872708	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAAGACTGTCTTCTTT	NA	False	NA	7	True	AATAAA	-23	NA	123307770	123350617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
ENSMUST00000026270.9	chr9	+	3558	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGTTGGTACTGTTTCT	NA	False	NA	19	True	AATAAA	-20	NA	123358823	123421665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUST00000026274.14	chr9	-	3419	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	72	579	0	-579	multi-exon	FALSE	canonical	3	87	junction_9	8.45905169363301	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGATTATAAAACTTTGGT	NA	False	NA	NA	False	ATTAAA	-20	NA	123546618	123526655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ENSMUST00000026288.5	chrX	-	1508	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	14.6816559150582	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150799291	150787577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
ENSMUST00000026289.10	chrX	+	962	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_1	187.651165730459	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	150784840	150787438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ENSMUST00000026292.15	chrX	+	14579	83	FSM	ENSMUSG00000025261.19	ENSMUST00000026292.15	14579	83	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_16	155.992592374347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTAGTACTTTCTTT	NA	False	NA	4	True	AATAAA	-21	NA	150586322	150718413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ENSMUST00000026295.10	chrX	-	3804	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	125.415310070182	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCATTTTCCTTGTTTC	NA	False	NA	-2	True	AAAAAG	-17	NA	149879539	149870090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUST00000026295.10-0	chrX	-	1418	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	0	2386	0	0	multi-exon	FALSE	canonical	3	72	junction_1	125.415310070182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	-3	True	AATAAA	-21	NA	149879539	149872476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUST00000026296.8	chrX	+	4001	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_3	37.9662935558211	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	False	NA	20	True	AATACA	-23	NA	149830165	149872517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ENSMUST00000026297.12	chrX	-	4865	16	FSM	ENSMUSG00000025266.12	ENSMUST00000026297.12	4865	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_15	142.508229781846	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800318	149766136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800200
ENSMUST00000026303.16	chrX	-	1884	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	8.28009661779378	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGTTGAGTGGATAT	NA	False	NA	-4	True	AATAAA	-21	NA	149371145	149354503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ENSMUST00000026318.15	chrX	-	1162	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	0	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_1	103.839106313566	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	153999445	153996127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUST00000026322.9	chr14	-	4687	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_23	15.9947560851118	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTAAGTGTTTTTTGTT	NA	False	NA	-3	True	AATACA	-26	NA	24537120	24498763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ENSMUST00000026324.10	chrX	+	1752	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	0	0	0	0	multi-exon	FALSE	canonical	2	666	junction_2	111.349262068796	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGTCTCCCATGTTGT	NA	False	NA	26	True	AATAAA	-20	NA	154045438	154080650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUST00000026328.11	chrX	-	990	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_2	71.6488349909163	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGCCATTGTAATTT	NA	False	NA	-1	True	AATAAA	-22	NA	154121463	154106913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
ENSMUST00000026354.15	chr8	+	1970	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	72.3410134171635	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GGAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	TTTAAA	-45	NA	122677318	122752676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUST00000026367.11	chr12	-	5694	6	FSM	ENSMUSG00000025323.11	ENSMUST00000026367.11	5694	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.0845531725631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCTCATCACGGTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	118265105	118198667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_118202130_118218144_118218339_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ENSMUST00000026377.9	chr4	-	3072	16	FSM	ENSMUSG00000025328.10	ENSMUST00000026377.9	3072	16	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	5.0710507348631	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTTGGCCTTTC	NA	False	NA	0	True	AATAAA	-14	NA	140537959	140512675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140513946_140516147_140516274_140517023_140517104_140518473_140518577_140518668_140518814_140520288_140520441_140521147_140521256_140522923_140523036_140523123_140523228_140523647_140523827_140525359_140525486_140526215_140526334_140527391_140527454_140528855_140528929_140530777_140530959_140537826
ENSMUST00000026381.7	chr4	-	2316	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	15.9114214743163	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTAGTTTACCACGGAG	NA	False	NA	-11	True	AATAAA	-14	NA	140501547	140473175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
ENSMUST00000026381.7-0	chr4	-	2560	16	FSM	ENSMUSG00000025330.7	ENSMUST00000026381.7	2316	16	-59	-185	-59	185	multi-exon	TRUE	canonical	3	76	junction_4	15.9114214743163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCACGGCTGGCAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	140501606	140472990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140473669_140475396_140475538_140475768_140475837_140477659_140477763_140477891_140478037_140479841_140479997_140483683_140483792_140484812_140484925_140485132_140485237_140485332_140485512_140487248_140487375_140488911_140489030_140490705_140490774_140492881_140492949_140496621_140496803_140501399
ENSMUST00000026383.4	chrX	+	1586	9	FSM	ENSMUSG00000025333.11	ENSMUST00000026383.4	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	3.91910385164772	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACTCCATTTTGACATG	NA	False	NA	NA	False	AATAAA	-10	NA	151564981	151591642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_151565289_151568038_151568149_151569121_151569217_151573479_151573573_151576324_151576435_151578551_151578661_151580695_151580814_151581373_151581612_151591236
ENSMUST00000026387.11	chr5	-	1548	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_4	74.8765650921568	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	False	NA	0	True	AATAAA	-17	NA	130284371	130274571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ENSMUST00000026390.8	chr5	+	2828	8	FSM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	35.7839320913503	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTGGTTTTGTTTTGT	2257	False	NA	16	True	AATAAA	-38	NA	130216001	130243178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ENSMUST00000026405.10	chr10	-	550	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_1	37.4788829431544	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTGTTTGAAGGAG	NA	False	NA	-1	True	AATAAA	-19	NA	128759393	128755782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
ENSMUST00000026407.9	chr10	+	1063	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	0	0	0	0	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGGAGATGGTCTCA	354	False	NA	28	True	ATTAAA	-20	NA	128745567	128748684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000026407.9-0	chr10	+	847	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	223	-7	0	0	multi-exon	FALSE	canonical	3	3700	junction_1	227.971623726484	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	577	False	NA	35	True	ATTAAA	-27	NA	128745790	128748691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000026409.5	chr10	-	1573	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCAGTTTCCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	128657463	128653770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
ENSMUST00000026409.5-0	chr10	-	1072	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	-12	513	0	67	multi-exon	FALSE	canonical	3	462	junction_3	176.577335905703	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	2	True	TATAAA	-19	NA	128657475	128654283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
ENSMUST00000026410.2	chr10	+	3028	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	-93	1294	0	649	multi-exon	FALSE	canonical	3	32	junction_1	125.746658890892	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTCCTTCTCTTCTTT	4045	False	NA	NA	False	TATAAA	-18	NA	128641451	128654021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUST00000026414.9	chr10	-	2834	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	14.5196561901106	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCCGCAAGGTTCTGA	9991	False	NA	-10	True	AATAAA	-16	NA	128579944	128556002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ENSMUST00000026415.9	chr10	-	2240	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_2	273.112309011024	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATCTCTTTCATAT	8275	False	NA	-16	True	ATTAAA	-20	NA	128540872	128533807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUST00000026416.15	chr10	-	2406	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_2	218.467295455575	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8248	False	NA	-21	True	ATTAAA	-15	NA	128540899	128533812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUST00000026420.7	chr10	-	681	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462616	128460405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
ENSMUST00000026420.7-0	chr10	-	458	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	223	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_3	3964.03030036631	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGCATCGGAGTGTGTT	NA	False	NA	-12	True	NA	NA	NA	128462393	128460405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
ENSMUST00000026425.13	chr10	-	2432	12	FSM	ENSMUSG00000025364.14	ENSMUST00000026425.13	2432	12	0	0	0	0	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	8745	False	NA	-5	True	AATAAA	-14	NA	128401803	128393634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUST00000026425.13-0	chr10	-	1608	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	0	875	0	-875	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCACCGTCGTCAAGC	8692	False	NA	-17	True	AATAAA	-11	NA	128401856	128394511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUST00000026427.8	chr10	-	3981	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_22	28.253790306199	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGGTGCACTGTGTGAA	8319	False	NA	NA	False	AATATA	-21	NA	128361739	128345833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ENSMUST00000026433.9	chr10	+	4533	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_11	16.862633913377	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGGGTGCCTCTGT	2667	False	NA	46	True	TATAAA	-19	NA	128295162	128326041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUST00000026434.13	chr11	+	1557	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_5	11.6303613925986	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTAGTGTCTTGGT	NA	False	NA	18	True	ATTAAA	-33	NA	119804635	119810374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ENSMUST00000026436.10	chr11	+	2394	14	FSM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	8.07215976759687	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833588	119897608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119897184
ENSMUST00000026439.14	chr10	-	1130	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245743	128237263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
ENSMUST00000026439.14-0	chr10	-	1042	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	88	0	-50	0	multi-exon	FALSE	canonical	3	274	junction_1	32.5444140965679	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245655	128237263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
ENSMUST00000026442.11	chr11	-	2752	13	FSM	ENSMUSG00000025377.15	ENSMUST00000026442.11	2752	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	25.9822321767951	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989557	119981356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986647_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ENSMUST00000026446.4	chr10	+	763	6	FSM	ENSMUSG00000025381.4	ENSMUST00000026446.4	763	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1015.96602305392	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	33	True	AATGAA	-29	NA	128158336	128163056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128158400_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUST00000026448.10	chr11	-	3193	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_4	19.8612470857816	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269590	120260387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ENSMUST00000026449.3	chr10	-	1360	4	FSM	ENSMUSG00000025383.3	ENSMUST00000026449.3	1360	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	5.73488351136175	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGGTCTAAATTTCTAA	NA	False	NA	NA	False	NA	NA	NA	128133953	128132007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128132845_128132946_128133094_128133358_128133461_128133679
ENSMUST00000026459.6	chr10	+	1916	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	8904	junction_3	854.417771581948	8482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGGGCCTTGTGTTTC	NA	False	NA	11	True	ATTAAA	-22	NA	127919141	127926260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUST00000026461.8	chr10	+	1583	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	0	0	0	0	multi-exon	FALSE	canonical	2	393	junction_7	89.7794751970998	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCGGTTCTACCC	984	False	NA	18	True	TATAAA	-20	NA	127851040	127865906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUST00000026469.9	chr10	-	2582	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	9.00771274458111	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCCCCCTTCCCCTC	NA	False	NA	-1	True	AATAAA	-21	NA	127502579	127496786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ENSMUST00000026470.6	chr10	-	2289	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTATTTTGCCCACGG	NA	False	NA	-21	True	NA	NA	NA	127358313	127353007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUST00000026470.6-0	chr10	-	2069	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	42	178	0	-178	multi-exon	FALSE	canonical	3	1501	junction_11	177.272820512796	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358271	127353185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUST00000026474.5	chr10	-	4057	13	FSM	ENSMUSG00000025407.8	ENSMUST00000026474.5	4057	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_12	8.16964231503164	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACCTGTCATGTTGGG	2738	False	NA	NA	False	AATAAA	-17	NA	127177843	127165750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127172598_127172881_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
ENSMUST00000026475.15	chr10	+	890	4	FSM	ENSMUSG00000025408.16	ENSMUST00000026475.15	890	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.555593949165	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	False	NA	29	True	AGTAAA	-18	NA	127126642	127132157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591
ENSMUST00000026476.13	chr10	-	4165	13	FSM	ENSMUSG00000025409.15	ENSMUST00000026476.13	4165	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	25.9994658064781	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124759	127117824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ENSMUST00000026479.11	chr10	+	1784	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_8	36.9826442582377	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	9216	False	NA	16	True	AATAAA	-18	NA	127102255	127117819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUST00000026480.13	chr4	-	2121	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_4	15.561903466677	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTTTGTGTCCT	NA	False	NA	1	True	ATTAAA	-41	NA	106536141	106519452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ENSMUST00000026487.6	chr18	+	1402	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	1641	junction_2	78	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGATTTATGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	77017712	77029308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77017913_77027263_77027366_77028208
ENSMUST00000026494.14	chr18	-	1893	8	FSM	ENSMUSG00000025427.16	ENSMUST00000026494.14	7300	8	-160	5567	-135	1216	multi-exon	FALSE	canonical	3	20	junction_2	6.65168384389875	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAATCAAAGGTGAAAAA	NA	False	NA	NA	False	NA	NA	NA	77652992	77549372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_77550146_77550579_77550687_77554372_77554469_77554630_77554736_77555936_77556067_77563169_77563281_77571844_77572161_77652737
ENSMUST00000026495.15	chr18	+	2471	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	0	0	0	0	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	2977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGTTGATGAGTC	NA	False	NA	20	True	ATTAAA	-22	NA	77861428	77870569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUST00000026495.15-0	chr18	+	1851	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	263	357	0	-143	multi-exon	FALSE	canonical	3	5078	junction_4	224.265707226978	3605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTAGTTTGTGTGGGGGTG	NA	False	NA	27	True	AATAAA	-15	NA	77861691	77870212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUST00000026504.13	chr10	-	903	6	FSM	ENSMUSG00000025436.13	ENSMUST00000026504.13	903	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	67.2767418949521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTTTGACACATTACT	NA	False	NA	-26	True	AATAAA	-19	NA	126737224	126704295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_126704595_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ENSMUST00000026506.5	chr7	+	1504	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_4	64.1950153828161	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	97345840	97368086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ENSMUST00000026507.13	chr3	+	4153	24	FSM	ENSMUSG00000025437.16	ENSMUST00000026507.13	4153	24	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_22	112.964370313398	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGGTGATTTTCTAAC	NA	False	NA	NA	False	AATAAA	-20	NA	152052114	152099249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095469_152097286_152097356_152097845
ENSMUST00000026519.10	chr13	+	2565	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_1	23.5189049253763	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCATTTCTTACA	NA	False	NA	9	True	AATAAA	-19	NA	119599303	119622653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ENSMUST00000026520.14	chr13	+	2551	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	46	True	AATAAA	-31	NA	119565457	119594754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000026520.14-0	chr13	+	1690	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	0	861	0	0	multi-exon	FALSE	canonical	3	177	junction_1	70.3985795311241	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGATTTTGAAATAAATGAA	NA	False	NA	75	True	AATAAA	-2	NA	119565457	119593893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000026537.13	chr7	+	4655	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAATATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	139705569	139717137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ENSMUST00000026537.13-0	chr7	+	1714	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	51	2890	0	0	multi-exon	FALSE	canonical	3	213	junction_2	25.7552583627758	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTGTAGAGTACTTCT	NA	False	NA	22	True	CATAAA	-14	NA	139705620	139714247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ENSMUST00000026538.13	chr7	-	1557	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	0	0	0	0	multi-exon	FALSE	canonical	3	1613	junction_2	95.2071854602651	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	False	NA	-1	True	NA	NA	NA	139696389	139685622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ENSMUST00000026539.14	chr7	-	685	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_5	86.8506764510214	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1471	False	NA	0	True	NA	NA	NA	139682354	139679382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
ENSMUST00000026540.9	chr7	+	620	5	FSM	ENSMUSG00000025467.9	ENSMUST00000026540.9	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	1.08972473588517	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAATGCGTGTCTTTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	139673307	139677113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139673382_139674944_139675012_139676062_139676116_139676586_139676694_139676794
ENSMUST00000026547.9	chr7	-	2960	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_17	73.93539684464	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGCATTATTACTG	NA	False	NA	NA	False	NA	NA	NA	139616179	139575908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ENSMUST00000026550.14	chr7	+	2774	16	FSM	ENSMUSG00000025477.15	ENSMUST00000026550.14	2774	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	41.2685513839938	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGCTTATTCTCC	NA	False	NA	19	True	AATAAA	-20	NA	138969025	139159568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158135_139158269
ENSMUST00000026553.6	chr7	-	1460	13	FSM	ENSMUSG00000025480.6	ENSMUST00000026553.6	1460	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	16.7779617355625	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	140367765	140357141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140361939_140362003_140367648
ENSMUST00000026558.7	chr7	+	3406	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAACATGCTAGATTGCC	NA	False	NA	NA	False	AAGAAA	-31	NA	140436869	140443643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUST00000026558.7-0	chr7	+	2354	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	465	587	0	0	multi-exon	FALSE	canonical	3	213	junction_2	23.6648408268052	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437334	140443056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUST00000026559.14	chr7	-	1461	7	FSM	ENSMUSG00000025486.18	ENSMUST00000026559.14	1461	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	79.4187215543875	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATCCTGTCTCTTTG	NA	False	NA	-14	True	AATAAA	-14	NA	140462222	140443582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140462070
ENSMUST00000026560.14	chr7	+	1989	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGCTTCTGTTCTT	NA	False	NA	28	True	AATAAA	-16	NA	140461880	140478555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUST00000026560.14-0	chr7	+	1544	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	446	-1	0	0	multi-exon	FALSE	canonical	3	1065	junction_10	109.792987025584	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGCTTCTGTTCTTT	NA	False	NA	29	True	AATAAA	-17	NA	140462326	140478556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUST00000026564.9	chr7	+	736	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTCCTGTGTTGAGT	NA	False	NA	24	True	AATAAA	-28	NA	140547952	140549738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140548352_140549401
ENSMUST00000026565.7	chr7	-	678	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1854	junction_1	0	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTGCTTTTATTCCTC	NA	False	NA	2	True	AATAAA	-23	NA	140590683	140589498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140589803_140590309
ENSMUST00000026568.10	chr7	+	3624	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACAAAAGTTGGTTG	6810	False	NA	NA	False	NA	NA	NA	140711198	140737519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ENSMUST00000026568.10-0	chr7	+	2158	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	15	1451	0	553	multi-exon	FALSE	canonical	3	293	junction_1	17.146910185967	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTCTGGCTGCCCTTT	6825	False	NA	12	True	AATAAA	-17	NA	140711213	140736068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ENSMUST00000026572.11	chr7	-	1003	6	FSM	ENSMUSG00000025499.19	ENSMUST00000026572.11	2828	6	0	1825	0	0	multi-exon	FALSE	canonical	3	237	junction_1	141.994366085419	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTCTCTGGCTGGA	NA	False	NA	-6	True	AGTAAA	-14	NA	140773873	140770842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ENSMUST00000026573.7	chr7	-	2095	13	FSM	ENSMUSG00000025500.13	ENSMUST00000026573.7	2095	13	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_8	3.08220700148449	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTGAGAGTTGAAAATGA	NA	False	NA	-1	True	AGTAAA	-14	NA	140793990	140789904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140790118_140790193_140790444_140790603_140790801_140790885_140791006_140791084_140791275_140791390_140791482_140791696_140791969_140792308_140792398_140792498_140792571_140792838_140792995_140793114_140793203_140793546_140793700_140793786
ENSMUST00000026576.5	chr7	+	1229	8	FSM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	0	0	0	0	multi-exon	FALSE	canonical	3	3267	junction_3	222.11993450864	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	3840	False	NA	18	True	ATTAAA	-17	NA	140972111	140982881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ENSMUST00000026577.13	chr7	+	3191	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_6	10.2434125173206	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918792	140942933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ENSMUST00000026580.12	chr7	-	3357	16	FSM	ENSMUSG00000025507.14	ENSMUST00000026580.12	3357	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	13.4154140201983	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023938	141018025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ENSMUST00000026585.14	chr7	+	1466	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	68.6787850082111	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGAAGTTCTTTCATTT	3491	False	NA	45	True	NA	NA	NA	141055152	141073340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUST00000026595.13	chr8	+	1122	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_4	36.201657420621	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTTGTATGTTGTGA	NA	False	NA	25	True	TATAAA	-17	NA	65399836	65421685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ENSMUST00000026599.10	chrX	+	1359	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGCTTTGTTTATTTAT	NA	False	NA	7	True	AATAAA	-20	NA	111221030	111282452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUST00000026599.10-0	chrX	+	1002	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	32	325	0	0	multi-exon	FALSE	canonical	3	334	junction_1	40.3205902734571	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTGGTAAAATCATAA	NA	False	NA	8	True	AATAAA	-16	NA	111221062	111282127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUST00000026607.15	chrX	-	4868	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_7	16.3001189428489	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTGTAATGGCTTATT	NA	False	NA	-9	True	AATAAA	-16	NA	112095214	111950289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ENSMUST00000026608.11	chr5	+	1492	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	51.2382669496149	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCCACCATACCTGG	NA	False	NA	5	True	AAAACA	-1	NA	130058130	130089630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ENSMUST00000026613.14	chr5	-	2687	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_6	16.6092675514317	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTCTTTCGTTACTATC	NA	False	NA	NA	False	NA	NA	NA	130031890	130017851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUST00000026617.13	chr5	-	2374	10	FSM	ENSMUSG00000025537.13	ENSMUST00000026617.13	2374	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.58653778449403	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTATTGACCTCATAAG	NA	False	NA	NA	False	NA	NA	NA	129907924	129892261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129893531_129893815_129893942_129894757_129894912_129895036_129895128_129895702_129895867_129898301_129898368_129902056_129902112_129902509_129902689_129903062_129903180_129907771
ENSMUST00000026624.11	chr14	+	3107	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	0	0	0	0	multi-exon	TRUE	canonical	3	817	junction_12	125.603480743967	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCCAAAGTGTAGTAATT	NA	False	NA	18	True	ATTAAA	-20	NA	122344449	122397016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUST00000026625.7	chr14	+	1231	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_7	45.2372430997437	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122419115	122639646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUST00000026635.8	chr14	+	4885	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_13	25.8768133172464	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	False	NA	35	True	NA	NA	NA	121272975	121521156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ENSMUST00000026649.14	chr11	+	1520	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	45.536310297998	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	14	True	AATAAA	-14	NA	117700493	117705109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
ENSMUST00000026659.10	chr11	-	2865	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_9	41.6618095045227	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671465	117656813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ENSMUST00000026661.4	chr11	-	1440	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_5	107.729084074615	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716918	117706351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ENSMUST00000026662.8	chr11	+	3807	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_1	10.9630059746403	503	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGCTGTTCTCTTCCCC	NA	False	NA	13	True	AATAAA	-15	NA	118913787	118922096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
ENSMUST00000026663.8	chr11	-	1386	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	58	2136	0	612	multi-exon	TRUE	canonical	3	19	junction_4	2.91547594742265	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGTTCTTTTATTTAAA	NA	False	NA	-3	True	AATATA	-14	NA	118931737	118929266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
ENSMUST00000026665.8	chr11	-	2597	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	0	2582	0	1218	multi-exon	FALSE	canonical	3	62	junction_3	7	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGTCCGAGATTAGCT	NA	False	NA	0	True	ATTAAA	-21	NA	118977047	118970980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
ENSMUST00000026666.13	chr11	+	3363	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	100.783495768854	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158851	119176280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUST00000026667.15	chr11	-	1509	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	0	0	0	0	multi-exon	FALSE	canonical	2	960	junction_1	150.634415963708	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190915	119179188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ENSMUST00000026670.5	chr11	-	5217	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	7.08872343937891	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTCATTGGATTCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	119438579	119429544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ENSMUST00000026671.13	chr11	+	6594	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_14	15.8664073872836	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCGCTGCCCTTGCCAG	2304	False	NA	8	True	AATAAA	-15	NA	119493974	119790233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ENSMUST00000026672.8	chr7	+	3802	22	FSM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_8	20.0953509362663	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTTGCCATTTCTT	1107	False	NA	7	True	ATTAAA	-18	NA	80863343	80984281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ENSMUST00000026681.7	chr8	-	4328	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGTCTGATAACAAA	NA	False	NA	0	True	AATAAA	-17	NA	66939171	66925769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
ENSMUST00000026681.7-0	chr8	-	993	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	-2	3337	0	-2125	multi-exon	FALSE	canonical	3	650	junction_5	98.3165239870129	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTGTATGTAAGAATTT	NA	False	NA	-15	True	AATAAA	-15	NA	66939173	66929106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
ENSMUST00000026698.8	chr6	-	5379	8	FSM	ENSMUSG00000025608.10	ENSMUST00000026698.8	5379	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	7.96164273891016	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGCCCTAGTGTTTTGC	NA	False	NA	1	True	AATAAA	-21	NA	31540916	31496422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_31500155_31501239_31501408_31501604_31501667_31501873_31502028_31503136_31503209_31503481_31503691_31505392_31505972_31540513
ENSMUST00000026699.15	chr6	+	2442	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	110	8843	0	0	multi-exon	FALSE	canonical	1	225	junction_9	99.990726213583	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31375779	31484903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ENSMUST00000026703.6	chr16	+	5867	5	FSM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	14.497844667398	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGTTGTACATTTCTGT	NA	False	NA	22	True	AATAAA	-25	NA	87495832	87530234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324
ENSMUST00000026704.14	chr16	-	2394	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	0	0	0	0	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGGTGAACATAATTTAT	NA	False	NA	-13	True	AATAAA	-28	NA	87292761	87280213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUST00000026704.14-0	chr16	-	1845	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	0	549	0	113	multi-exon	FALSE	canonical	3	4287	junction_9	381.591725405517	4608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292761	87280762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUST00000026710.12	chr16	+	3205	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	31.0441141639032	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTAGAGTTTAAGT	NA	False	NA	10	True	AATAAA	-18	NA	87251590	87280405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ENSMUST00000026723.9	chrX	+	1289	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	2155	junction_4	129.05328356923	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACTTTTTGAATTCTTT	NA	False	NA	12	True	AATAAA	-16	NA	52077013	52110536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ENSMUST00000026735.9	chr9	+	1526	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	5.71547606649408	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTTATATCAGACTCAG	NA	False	NA	14	True	ATTAAA	-28	NA	108911560	108921557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
ENSMUST00000026737.12	chr9	+	1834	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	42.9678949914934	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	False	NA	18	True	AATAAA	-18	NA	108867652	108886792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUST00000026743.14	chr9	+	1653	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	0	0	0	0	multi-exon	FALSE	canonical	3	5755	junction_3	194.83802033142	4283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765700	108778691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ENSMUST00000026750.15	chrX	-	5738	22	FSM	ENSMUSG00000025658.17	ENSMUST00000026750.15	5738	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	3.75315438004534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATCCCTGTAAAGCAC	NA	False	NA	NA	False	AATAAA	-11	NA	156826290	156604431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUST00000026760.3	chrX	+	4007	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	0	0	0	0	multi-exon	TRUE	canonical	3	148	junction_2	10.5	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTACTTTGTGTCTTC	NA	False	NA	18	True	ATTAAA	-24	NA	80114321	80141478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_80114767_80127896_80128038_80138057
ENSMUST00000026816.15	chr7	-	2114	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTGTGTGTATGAGT	NA	False	NA	-3	True	AATAAA	-16	NA	80551017	80540470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ENSMUST00000026816.15-0	chr7	-	1576	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	0	538	0	0	multi-exon	FALSE	canonical	3	95	junction_7	16.071269840486	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCAATTAGCAATTTA	NA	False	NA	-7	True	AATAAA	-20	NA	80551017	80541008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ENSMUST00000026818.12	chr7	-	1345	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTTCCCTGAATTCTGT	1385	False	NA	-5	True	AATAAA	-18	NA	80597528	80565124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUST00000026818.12-0	chr7	-	921	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	235	189	0	0	multi-exon	FALSE	canonical	3	936	junction_3	43.4391528462515	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAGTGTTTGTAT	1620	False	NA	-11	True	ATTAAA	-11	NA	80597293	80565313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUST00000026820.11	chr7	+	2846	18	FSM	ENSMUSG00000025726.12	ENSMUST00000026820.11	2846	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	56.988677318925	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80764546	80820164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_80764626_80765270_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
ENSMUST00000026823.16	chr17	-	3173	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGGTGTCCTGCTCGTC	NA	False	NA	1	True	AATAAA	-24	NA	26161022	26145394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUST00000026823.16-0	chr17	-	3054	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	113	6	0	0	multi-exon	FALSE	canonical	3	238	junction_4	23.9309423132479	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26160909	26145400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUST00000026826.14	chr17	-	2466	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	27.4104602904317	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138688	26101087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
ENSMUST00000026827.16	chr17	+	778	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	456	9	0	0	multi-exon	FALSE	canonical	3	287	junction_5	67.7542618585724	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGCTTGCTGGGAAT	7224	False	NA	30	True	AATAAA	-31	NA	26094503	26096134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
ENSMUST00000026828.7	chr17	-	842	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	22.6770809408971	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCGGGTGTTGGTGATTG	7762	False	NA	-4	True	AATAAA	-15	NA	26087738	26082671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
ENSMUST00000026832.14	chr17	+	2091	9	FSM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	9.19238815542512	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGGTGGATGCGCC	NA	False	NA	17	True	NA	NA	NA	26048016	26050816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ENSMUST00000026833.6	chr17	+	3099	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	16.5529453572468	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTGTCACTTTCATTG	NA	False	NA	18	True	AATAAA	-20	NA	26042600	26047704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
ENSMUST00000026839.5	chrX	-	3699	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_5	11.6535640709422	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTCTTGTCATCCTTTTG	NA	False	NA	-3	True	AATAAA	-24	NA	166165745	166129317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ENSMUST00000026841.15	chr5	+	2033	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_6	59.1301389591918	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCTCGTTATTAGTGG	NA	False	NA	10	True	AATAAA	-25	NA	30360245	30389591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUST00000026843.12	chr5	-	2552	20	FSM	ENSMUSG00000025745.13	ENSMUST00000026843.12	2552	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	102.267992951223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGCCTGTTTTCTTCT	NA	False	NA	-3	True	AATAAA	-23	NA	30359974	30324423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_30324959_30325042_30325064_30325717_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ENSMUST00000026846.11	chr5	-	3163	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	0	0	0	0	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTGTTAAGACTGCTA	NA	False	NA	NA	False	NA	NA	NA	30278615	30263824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ENSMUST00000026846.11-0	chr5	-	992	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	0	2171	0	66	multi-exon	FALSE	canonical	3	1628	junction_1	98.4757443344412	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278615	30265995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ENSMUST00000026858.11	chr3	+	3479	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_10	36.6472675955824	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7785	False	NA	27	True	AATAAA	-23	NA	40754453	40771318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUST00000026859.11	chr3	-	3151	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	6.38308715692435	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGAAGAGGACCTGAAT	NA	False	NA	16	True	AATAAA	-34	NA	40801320	40772537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ENSMUST00000026865.15	chr3	+	5481	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_7	54.3710400856927	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGTTGAAATCTGCTT	NA	False	NA	19	True	AATAAA	-28	NA	41510165	41571299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ENSMUST00000026866.15	chr3	-	3005	21	FSM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_17	7.74919350642375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTCATGTATTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	41696949	41581154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ENSMUST00000026887.14	chr2	-	1060	9	FSM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	1503.84357564209	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATTGTAACTTTCAGAA	9587	False	NA	12	True	AATAAA	-33	NA	10085238	10060826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUST00000026888.11	chr2	-	4792	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	NA	False	NA	0	True	AATAAA	-20	NA	10053407	9919362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
ENSMUST00000026888.11-1	chr2	-	4053	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	0	739	0	0	multi-exon	FALSE	canonical	3	96	junction_4	19.5078331845327	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTGTGTTTATATTGT	NA	False	NA	NA	False	AGTAAA	-18	NA	10053407	9920101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
ENSMUST00000026891.5	chr9	+	1053	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_3	103.377058995362	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	False	NA	15	True	AATAAA	-20	NA	122942279	122965194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ENSMUST00000026892.15	chr9	-	2492	8	FSM	ENSMUSG00000025786.18	ENSMUST00000026892.15	2492	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	109.785505158273	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8738	False	NA	-1	True	AATAAA	-16	NA	122942245	122905896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
ENSMUST00000026896.10	chr7	-	5368	6	FSM	ENSMUSG00000025789.10	ENSMUST00000026896.10	5368	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2.31516738055805	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTGTCTATAGAGGC	NA	False	NA	NA	False	NA	NA	NA	73663422	73588866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_73593213_73610439_73610734_73616488_73616747_73621665_73621795_73626405_73626469_73663144
ENSMUST00000026897.14	chr7	-	4589	10	FSM	ENSMUSG00000025790.15	ENSMUST00000026897.14	4589	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.82574185835055	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTTCCATGAGTGT	NA	False	NA	NA	False	TATAAA	-20	NA	74204362	73931605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_73934418_73946968_73947034_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
ENSMUST00000026899.4	chr11	+	2023	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	8.74356906531881	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGGGGCTGGCAGATC	NA	False	NA	23	True	AATAAA	-37	NA	120382665	120390013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ENSMUST00000026901.12	chr7	+	653	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACACAGAATAATAAAAGT	NA	False	NA	NA	False	AAGAAA	-9	NA	44974388	44975041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44974400_44975000
ENSMUST00000026902.9	chr10	-	3522	5	FSM	ENSMUSG00000025795.9	ENSMUST00000026902.9	3522	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	3.60555127546399	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTCTTTATTTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	121312252	121246254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121248991_121250262_121250373_121251970_121252194_121252989_121253098_121311907
ENSMUST00000026922.15	chr7	-	1736	9	FSM	ENSMUSG00000025813.15	ENSMUST00000026922.15	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	3.99804639792987	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	81356692	81259477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268431_81273999_81274093_81286108_81286241_81299301_81299459_81356506
ENSMUST00000026924.7	chr2	-	3852	18	FSM	ENSMUSG00000025815.14	ENSMUST00000026924.7	3852	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	14.4538401405885	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATCCATTGCCTTTCC	NA	False	NA	NA	False	AAAAAG	-26	NA	5947554	5901988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5902352_5902867_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ENSMUST00000026937.12	chr5	+	957	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	28.9179874818425	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTCTCGACTCCCTCA	3595	False	NA	NA	False	AATAAA	-30	NA	113910808	113916349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ENSMUST00000026956.4	chr2	+	1540	3	FSM	ENSMUSG00000025838.13	ENSMUST00000026956.4	1540	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGGATACCAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	87338801	87341209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_87339089_87339524_87340113_87340544
ENSMUST00000026957.4	chr2	-	1861	3	FSM	ENSMUSG00000025839.4	ENSMUST00000026957.4	1861	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATTTATTTATTTAT	NA	False	NA	-7	True	AATAAA	-16	NA	87322762	87319430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_87320426_87321167_87321750_87322478
ENSMUST00000026972.8	chr5	+	3582	10	FSM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	3.46410161513775	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGGGACTCACTCCTT	NA	False	NA	17	True	AATAAA	-30	NA	138740268	138795832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUST00000026975.11	chr5	+	3450	13	FSM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	24.0323855569012	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCCATCTGTGTGAT	NA	False	NA	11	True	ATTAAA	-19	NA	139135977	139172265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ENSMUST00000026976.12	chr5	+	2107	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139238078	139255806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ENSMUST00000026976.12-0	chr5	+	1339	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	46	722	0	0	multi-exon	FALSE	canonical	3	1098	junction_8	59.685503893324	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238124	139255084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ENSMUST00000026978.7	chrX	+	6834	6	FSM	ENSMUSG00000025860.16	ENSMUST00000026978.7	6834	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	18.4347497948847	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTATCTTCTTTGTAT	NA	False	NA	18	True	AATAAA	-14	NA	41182604	41198533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ENSMUST00000026986.7	chr13	+	648	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTCTTAATCTCATTCC	5978	False	NA	23	True	AATAAA	-27	NA	54738019	54738971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54738233_54738536
ENSMUST00000026987.12	chr13	-	1756	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	0	0	0	0	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATGCACTTTTATTT	NA	False	NA	-3	True	NA	NA	NA	54737903	54731997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUST00000026987.12-0	chr13	-	1075	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	32	649	0	-298	multi-exon	FALSE	canonical	3	1006	junction_4	30.4302481094059	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTAGGTGGGTTTTTG	NA	False	NA	-24	True	GATAAA	-21	NA	54737871	54732646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUST00000026988.11	chr13	+	1046	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	14.6363322667334	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGCAGGCTCAGTGCC	2674	False	NA	NA	False	NA	NA	NA	54722827	54728941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
ENSMUST00000026989.15	chr13	-	2727	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_7	24.8696602308918	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTCTTGTCCATTCTG	NA	False	NA	NA	False	AATAAA	-26	NA	54713248	54699030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ENSMUST00000026990.6	chr13	-	2335	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_3	36.0699320764539	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGTCTAAAGTTACTA	NA	False	NA	-3	True	AATAAA	-15	NA	54616662	54606649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
ENSMUST00000026991.16	chr13	+	1748	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAGGCTGACTTA	NA	False	NA	1	True	NA	NA	NA	54769636	54809399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUST00000026991.16-0	chr13	+	4245	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	-20	-2477	0	0	multi-exon	FALSE	canonical	3	159	junction_3	87.926617130423	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCAGCTGTGGGTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	54769616	54811876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUST00000026993.14	chr13	+	1585	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_3	20.9606044468071	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATGTTCACCGT	NA	False	NA	18	True	AATAAA	-19	NA	54937189	54944589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ENSMUST00000026997.12	chr13	-	2516	15	FSM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	0	415	0	0	multi-exon	FALSE	canonical	0	0	junction_10	39.2030949423795	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATCTTATTTCAATAG	NA	False	NA	NA	False	AATATA	-12	NA	55248108	55176107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUST00000026999.10	chr18	+	4278	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	0	0	0	0	multi-exon	FALSE	canonical	3	1522	junction_2	99.0667563929607	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGTTGTTCAGAGCTT	NA	False	NA	19	True	ATTAAA	-24	NA	75500599	75529006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
ENSMUST00000027027.7	chr9	+	4446	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	0	0	0	0	multi-exon	TRUE	canonical	3	200	junction_7	32.0504576240346	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGATTATCTTGTATTTTA	NA	False	NA	-51	True	NA	NA	NA	3403591	3479236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ENSMUST00000027036.11	chr1	+	2507	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_8	45.3636349403352	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878045	4916962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ENSMUST00000027040.13	chr1	+	7607	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTGGCCTCAAACTCAAA	NA	False	NA	NA	False	NA	NA	NA	6284868	6346872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ENSMUST00000027040.13-0	chr1	+	5430	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	18	2159	0	0	multi-exon	FALSE	canonical	3	76	junction_19	28.8457209021846	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTGAATCAAAATGGTT	NA	False	NA	8	True	AATAAA	-14	NA	6284886	6344713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ENSMUST00000027044.15	chr1	+	2022	13	FSM	ENSMUSG00000025911.15	ENSMUST00000027044.15	2022	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.4416197045735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAAGAAAAAAATGTG	NA	False	NA	NA	False	ATTAAA	-41	NA	9618279	9647126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ENSMUST00000027050.10	chr1	-	1698	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCTGACTGGCCTGAGT	NA	False	NA	-1	True	AGTAAA	-40	NA	10108352	10094825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ENSMUST00000027050.10-0	chr1	-	1274	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	182	242	0	0	multi-exon	FALSE	canonical	3	713	junction_7	104.105715501119	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCACGTGAAATTGTCCT	NA	False	NA	-25	True	AATAAA	-2	NA	10108170	10095067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ENSMUST00000027052.13	chr1	-	2763	13	FSM	ENSMUSG00000025920.20	ENSMUST00000027052.13	2763	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	35.7596140918774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTATGAGTTGTTCCTT	NA	False	NA	NA	False	AGTAAA	-13	NA	16589530	16299033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16300091_16301226_16301316_16415927_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
ENSMUST00000027053.8	chr1	+	2851	6	FSM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	-451	1187	-451	0	multi-exon	FALSE	canonical	2	4	junction_1	4.02988833592198	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGGTTATTAGCT	NA	False	NA	NA	False	ATTAAA	-13	NA	16175546	16202771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
ENSMUST00000027056.12	chr1	+	6138	40	FSM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	53	4862	0	615	multi-exon	TRUE	canonical	1	6	junction_1	5.99769844088307	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGATAGTTGTGCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	11063741	11369043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_11064134_11131549_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
ENSMUST00000027057.8	chr1	+	1581	9	FSM	ENSMUSG00000025925.15	ENSMUST00000027057.8	1581	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	336.315978656977	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACCTAGCATTGA	NA	False	NA	51	True	TATAAA	-11	NA	15875887	15913694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUST00000027062.7	chr1	-	1741	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATTGTAAAAGTTCTT	NA	False	NA	4	True	AATAAA	-21	NA	14826214	14823569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_14824550_14825453
ENSMUST00000027065.12	chr1	+	1168	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTCATTCATTTCTAT	NA	False	NA	17	True	AATAAA	-17	NA	21288798	21300391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
ENSMUST00000027065.12-0	chr1	+	921	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	244	3	157	0	multi-exon	FALSE	canonical	3	87	junction_4	3.08220700148449	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTTCTCATTCATTTC	NA	False	NA	14	True	AATAAA	-14	NA	21289042	21300388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
ENSMUST00000027066.13	chr1	-	4347	18	FSM	ENSMUSG00000025932.15	ENSMUST00000027066.13	4347	18	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_13	8.24998689314257	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCCTTGGATGTCAGTA	NA	False	NA	-11	True	AATAAA	-21	NA	14380424	14239177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ENSMUST00000027068.11	chr1	-	2938	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_5	62.5811473208985	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTATTTTTTGTAA	9656	False	NA	-9	True	ATTAAA	-15	NA	13660134	13634921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ENSMUST00000027071.7	chr1	-	2979	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	0	1515	0	-1515	multi-exon	FALSE	canonical	3	2151	junction_5	155.94015946296	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730770	13695068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ENSMUST00000027103.7	chr1	+	2267	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	29	2190	0	0	multi-exon	FALSE	canonical	3	308	junction_4	54.5943720043143	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63769801	63791624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ENSMUST00000027111.15	chr1	-	2661	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_18	130.918608680223	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215981	63182754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ENSMUST00000027114.6	chr1	+	3540	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCATGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	57445486	57457112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ENSMUST00000027114.6-0	chr1	+	1060	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	431	2049	0	-2049	multi-exon	FALSE	canonical	3	301	junction_4	18.5926732881531	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGCTAGTGTTCTTTAA	NA	False	NA	9	True	AATAAA	-12	NA	57445917	57455063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ENSMUST00000027123.15	chr1	-	2423	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	0	0	0	0	multi-exon	FALSE	canonical	2	4506	junction_7	645.86437693097	7776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4455	False	NA	-6	True	AATAAA	-16	NA	55127183	55116993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUST00000027125.7	chr1	+	1733	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	22.7486263321547	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTTATTTAAATCTTT	3559	False	NA	22	True	AATAAA	-28	NA	55091928	55111861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
ENSMUST00000027127.14	chr1	-	6195	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	0	0	0	0	multi-exon	TRUE	canonical	2	1032	junction_2	157.733865172392	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATAGTATACCAGTTCTT	NA	False	NA	-9	True	AATAAA	-17	NA	55066640	55024327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ENSMUST00000027127.14-0	chr1	-	4251	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	87	1857	0	-1853	multi-exon	FALSE	canonical	2	1032	junction_2	157.733865172392	2465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066553	55026184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ENSMUST00000027131.6	chr1	-	5498	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	0	0	0	0	multi-exon	TRUE	canonical	3	237	junction_4	21.0736509753792	725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGTGTTTTCATTGTC	NA	False	NA	NA	False	AATAAA	-16	NA	46893206	46846703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ENSMUST00000027137.11	chr1	-	3370	8	FSM	ENSMUSG00000025993.11	ENSMUST00000027137.11	3370	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.82946406783796	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTGTGCTGTAGTCAAT	NA	False	NA	NA	False	TATAAA	-31	NA	45964742	45947227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_45948880_45950051_45950691_45951395_45951642_45957468_45957596_45958044_45958161_45960315_45960476_45963876_45963945_45964380
ENSMUST00000027139.15	chr1	+	2953	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	51.2145243070752	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834325	45862779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ENSMUST00000027153.6	chr1	-	1916	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCCCTGGGGAATGAGA	NA	False	NA	-19	True	AATAAA	-29	NA	66902436	66869997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ENSMUST00000027153.6-0	chr1	-	1478	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	0	438	0	-438	multi-exon	FALSE	canonical	3	107	junction_4	12.5315601582564	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGGGAGAGAGAAATTTT	NA	False	NA	-13	True	AATAAA	-20	NA	66902436	66870435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ENSMUST00000027157.10	chr1	+	2692	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_1	56.5840967056999	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	False	NA	5	True	ATTAAA	-12	NA	66739989	66758964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUST00000027173.15	chr1	-	1653	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	0	8359	0	-1276	multi-exon	FALSE	canonical	3	863	junction_12	56.5618515923547	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137067	60117302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ENSMUST00000027178.13	chr1	-	6342	34	FSM	ENSMUSG00000026024.15	ENSMUST00000027178.13	6342	34	0	0	0	0	multi-exon	TRUE	canonical	2	89	junction_12	16.3968238094348	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTATGACTGTGGAA	NA	False	NA	2	True	AATAAA	-20	NA	59276390	59202084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ENSMUST00000027185.11-1	chr1	+	2310	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	57	593	57	0	multi-exon	FALSE	canonical	3	56	junction_7	10.2964328252857	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCTTTTATATATTTTG	NA	False	NA	15	True	AATAAA	-17	NA	59012737	59034281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ENSMUST00000027186.12	chr1	-	6189	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	7.62335592475883	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTGTGATTTT	1547	False	NA	0	True	AATAAA	-41	NA	59012589	58939607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ENSMUST00000027189.15	chr1	+	2090	9	FSM	ENSMUSG00000026029.15	ENSMUST00000027189.15	2585	9	0	495	0	0	multi-exon	FALSE	canonical	2	10	junction_6	4.14578098794425	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTATGTTTTGTTT	2924	False	NA	3	True	AATATA	-16	NA	58834532	58886167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58834898_58863073_58863407_58866365_58866472_58868031_58868171_58868254_58868309_58870764_58870827_58872791_58872934_58883502_58884005_58885780
ENSMUST00000027193.9	chr1	+	763	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_1	90.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	False	NA	52	True	AATAAA	-20	NA	58625542	58635123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58625830_58630248_58630409_58634807
ENSMUST00000027193.9-0	chr1	+	524	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	239	0	239	0	multi-exon	FALSE	canonical	3	979	junction_1	90.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCCCTCTAACCTCA	NA	False	NA	52	True	AATAAA	-20	NA	58625781	58635123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58625830_58630248_58630409_58634807
ENSMUST00000027198.12	chr1	-	3561	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTAGTTTTGTTTTGA	NA	False	NA	0	True	AATAAA	-23	NA	58544268	58501929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUST00000027198.12-0	chr1	-	2982	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	154	425	0	-425	multi-exon	FALSE	canonical	3	442	junction_12	52.5802073093293	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544114	58502354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUST00000027202.9	chr1	+	4939	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.2616813928041	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	5139	False	NA	15	True	ATTAAA	-19	NA	58035129	58065058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ENSMUST00000027214.4	chr1	+	3907	15	FSM	ENSMUSG00000026048.17	ENSMUST00000027214.4	3907	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.0296622066399	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTATCCATATTGTTA	NA	False	NA	94	True	ATTAAA	-40	NA	44187006	44220420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218306_44218392_44219690
ENSMUST00000027215.12	chr1	-	1272	8	FSM	ENSMUSG00000026049.12	ENSMUST00000027215.12	1272	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	186.541782812039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTTGTTTTACTCT	NA	False	NA	0	True	ATTAAA	-20	NA	44141551	44125772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44140626_44140683_44141059_44141118_44141487
ENSMUST00000027232.15	chr1	-	4129	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	0	0	0	0	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGTTTCTGCATTTG	NA	False	NA	-1	True	ATTAAA	-18	NA	30988836	30979383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ENSMUST00000027232.15-0	chr1	-	2368	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	-2	1763	0	-486	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATACTGTCTGGGAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	30988838	30981146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ENSMUST00000027247.11	chr1	+	1089	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	2233	592	0	0	multi-exon	FALSE	canonical	3	825	junction_1	70.5532423067856	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	39026921	39035727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ENSMUST00000027249.12	chr1	-	2975	7	FSM	ENSMUSG00000026080.15	ENSMUST00000027249.13	2975	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	2.75378527364305	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTATCTGGGTTTGATTGT	NA	False	NA	NA	False	ATTAAA	-26	NA	38937091	38902947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936970
ENSMUST00000027251.12	chr1	-	4262	23	FSM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_15	29.8629099122934	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168743	38091866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ENSMUST00000027252.8	chr1	+	4120	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	119	3558	0	0	multi-exon	FALSE	canonical	3	450	junction_9	76.9774965275217	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTTCTACAGATTTTG	1408	False	NA	37	True	ATTAAA	-24	NA	38037209	38091102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUST00000027256.12	chr1	+	717	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	55	197	0	0	multi-exon	FALSE	canonical	3	545	junction_1	191.904559612324	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37929612	37937419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUST00000027257.10	chr1	-	1231	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	18.2543754267908	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGATCCACTCACCTG	NA	False	NA	0	True	AATAAA	-19	NA	37929492	37917968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUST00000027263.14	chr1	-	3293	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	6.25316246521123	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCTTAAGTTACTCTTG	686	False	NA	NA	False	AATAAA	-26	NA	53824383	53794664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
ENSMUST00000027263.14-0	chr1	-	2752	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	0	541	0	-541	multi-exon	FALSE	canonical	3	57	junction_1	6.25316246521123	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGAATAATAAGTATGCC	686	False	NA	54	True	NA	NA	NA	53824383	53795205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
ENSMUST00000027264.10	chr1	-	2442	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	45.94344349306	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTTAATTTTTACCT	NA	False	NA	-2	True	AATAAA	-41	NA	53391911	53383775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
ENSMUST00000027265.10	chr1	+	1868	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	14.7537611946159	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGCCTTGTGTGTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	53352782	53365502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUST00000027266.4	chr1	+	1910	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	12.7104506432917	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTTCCTCTGTTTAA	NA	False	NA	93	True	TATAAA	-8	NA	53336253	53349468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
ENSMUST00000027267.14	chr1	-	3054	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	15.4495145554804	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6052	False	NA	NA	False	AATAAA	-18	NA	53336177	53228345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ENSMUST00000027271.9	chr1	-	1776	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	0	3991	0	250	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTACAGTTCAAGTGGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	52856847	52828576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
ENSMUST00000027277.7	chr1	+	2982	24	FSM	ENSMUSG00000062939.12	ENSMUST00000027277.7	2982	24	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_15	7.16402480577569	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTGTTTCTGGTTTT	NA	False	NA	NA	False	AATATA	-18	NA	52047401	52146343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_52047888_52050941_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122020_52122039_52122136_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUST00000027279.12	chr1	-	2838	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	8.25590697622012	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	-1	True	AATAAA	-32	NA	51517558	51508646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
ENSMUST00000027285.13	chr1	+	1414	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	129.498416978741	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCAGCAAGCGGTAT	NA	False	NA	NA	False	AATGAA	-44	NA	37469250	37478205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUST00000027286.7	chr1	-	3863	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_2	27.5	513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTGTTTCAAGATTA	6272	False	NA	-3	True	NA	NA	NA	37469184	37456164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_37459709_37467422_37467507_37468949
ENSMUST00000027290.12	chr1	-	6546	41	FSM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_29	35.4925256216009	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTTGTTTTGCTTTT	7221	False	NA	2	True	AATAAA	-25	NA	36978608	36831271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ENSMUST00000027297.11	chr1	+	3279	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	21.365621823817	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34889072	34918661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUST00000027303.14	chr1	+	1423	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	47	4366	0	476	multi-exon	FALSE	canonical	3	439	junction_1	56.5552826887109	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTCCTTGTTTGTTTTG	5660	False	NA	46	True	NA	NA	NA	34478978	34484071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ENSMUST00000027315.14	chr1	-	6480	9	FSM	ENSMUSG00000026135.18	ENSMUST00000027315.14	6480	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	11.659223816361	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTATGGTTCCTAGGTTG	NA	False	NA	14	True	NA	NA	NA	74627184	74605584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
ENSMUST00000027322.14	chr1	+	3636	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	15.8893745069534	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTGCTCGAGTCA	NA	False	NA	14	True	AATAAA	-20	NA	82294172	82423087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ENSMUST00000027338.4	chr1	-	683	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	0.5	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTATTTTATTTTTA	NA	False	NA	-1	True	AATAAA	-23	NA	24044737	24035019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_24035442_24042237_24042388_24044626
ENSMUST00000027339.14	chr1	-	2289	10	FSM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_6	35.0269737329517	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTATTTGTGGGTTTT	NA	False	NA	-2	True	ATTAAA	-17	NA	23961398	23884705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ENSMUST00000027343.6	chr1	-	1610	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	-66	3300	-66	0	multi-exon	FALSE	canonical	3	39	junction_5	10.9201648339208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23422322	23408804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
ENSMUST00000027356.7	chr1	+	1892	9	FSM	ENSMUSG00000026170.7	ENSMUST00000027356.7	1892	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	1.98431348329844	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGGGGGGTCTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	74752732	74777051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74753051_74771077_74771269_74774435_74774636_74774712_74774911_74775022_74775196_74775839_74776007_74776175_74776258_74776337_74776551_74776701
ENSMUST00000027358.11	chr1	+	1890	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	42.4562199476696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCTGCCTTCTGA	1142	False	NA	NA	False	NA	NA	NA	74627458	74631602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUST00000027358.11-0	chr1	+	1497	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	74	319	0	0	multi-exon	FALSE	canonical	3	21	junction_1	42.4562199476696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTTGTGCCTTTCCTC	1216	False	NA	4	True	CATAAA	-16	NA	74627532	74631283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUST00000027367.14	chr1	+	2876	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGCCCCCACCTCTGGAA	3310	False	NA	NA	False	AATAAA	-17	NA	74430667	74436444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
ENSMUST00000027367.14-0	chr1	+	2298	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	286	292	0	-289	multi-exon	FALSE	canonical	3	15	junction_2	3.53160335006952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGCCTCTGTGGTTTTT	3596	False	NA	13	True	ACTAAA	-22	NA	74430953	74436152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
ENSMUST00000027370.13	chr1	+	2937	10	FSM	ENSMUSG00000026179.15	ENSMUST00000027370.13	2937	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	408.826988068106	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAAGGTCTGAGCTCTCA	NA	False	NA	3	True	NA	NA	NA	74324203	74392843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74324297_74325000_74325170_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ENSMUST00000027373.12	chr16	+	4922	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	6.62093155786084	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGCCACTTGGATCT	NA	False	NA	35	True	AATAAA	-17	NA	16714332	16745228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ENSMUST00000027379.10	chr1	+	2549	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_5	74.8852455427636	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	322	False	NA	22	True	TATAAA	-28	NA	72346585	72434111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ENSMUST00000027381.13	chr1	-	1186	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_5	66.3254191429636	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTATCTTTTAAGGATT	NA	False	NA	-6	True	AATAAA	-19	NA	72323473	72298330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ENSMUST00000027384.6	chr1	+	2845	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	0	0	0	0	multi-exon	TRUE	canonical	3	576	junction_4	38.3577313661217	1032	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTGCTGGCTGA	NA	False	NA	15	True	AATAAA	-15	NA	71596308	71618790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ENSMUST00000027393.8	chr1	-	2610	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	180	2869	180	-2869	multi-exon	FALSE	canonical	3	27	junction_8	5.88642506110457	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGAATTCATTTTGAT	NA	False	NA	-41	True	AATAAA	-14	NA	71142125	71069525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ENSMUST00000027394.12	chr1	+	1316	9	FSM	ENSMUSG00000026197.13	ENSMUST00000027394.12	1316	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	17.9304210770411	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGTGCTGTTTCTT	2041	False	NA	12	True	AGTAAA	-18	NA	75145298	75148269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ENSMUST00000027396.15	chr1	-	2966	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_18	16.1765910736914	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGGTTTGGTTGTG	NA	False	NA	-2	True	AATAAA	-15	NA	75157036	75148360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ENSMUST00000027401.11	chr1	+	1480	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	32	1364	0	0	multi-exon	FALSE	canonical	3	167	junction_4	30.7265756142723	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187513	75190886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUST00000027414.16	chr1	+	4458	25	FSM	ENSMUSG00000026213.16	ENSMUST00000027414.16	4458	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	11.130538571376	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCACTTTCTCAGTGG	2740	False	NA	NA	False	ATTAAA	-15	NA	75498172	75513979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ENSMUST00000027421.13	chr1	-	9632	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTACTTTATGTACA	7894	False	NA	-8	True	AATAAA	-22	NA	84817025	84698909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ENSMUST00000027421.13-0	chr1	-	6564	41	FSM	ENSMUSG00000026219.15	ENSMUST00000027421.13	9632	41	-7	3075	0	0	multi-exon	FALSE	canonical	3	439	junction_40	206.047323144466	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ENSMUST00000027422.7	chr1	-	3207	5	FSM	ENSMUSG00000026220.7	ENSMUST00000027422.7	3207	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.59807621135332	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	84912855	84883618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84885151_84889916_84890895_84900574_84900719_84907007_84907286_84912580
ENSMUST00000027425.16	chr1	+	2230	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	14.9853261559434	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAAACCCAAAACCT	NA	False	NA	-8	True	NA	NA	NA	85822001	85836396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
ENSMUST00000027432.9	chr1	+	3112	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_6	102.249660417801	2766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTCAATCCACACACCA	NA	False	NA	NA	False	NA	NA	NA	85992340	86066873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ENSMUST00000027438.8	chr1	-	2425	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	0	5777	0	0	multi-exon	FALSE	canonical	3	5685	junction_13	926.263678639546	7614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287122	86278217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ENSMUST00000027444.15	chr1	-	1159	5	FSM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	25.5391855782443	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGACTGTGACTCT	NA	False	NA	17	True	ATTAAA	-43	NA	86510269	86470715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
ENSMUST00000027446.11	chr1	+	2231	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_3	30.6743649757687	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	86514821	86534222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUST00000027451.13	chr1	-	6328	18	FSM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_15	30.5422731607683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTTGTCTTTGTTC	NA	False	NA	-3	True	AATAAA	-23	NA	77491725	77343821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ENSMUST00000027463.11	chr1	-	2695	17	FSM	ENSMUSG00000026247.14	ENSMUST00000027463.11	2695	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	3.11999599358717	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTTGGCCTCCAGACA	7178	False	NA	NA	False	AATAAA	-16	NA	87082749	87075379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_87075809_87075947_87076025_87076346_87076443_87076855_87076922_87077217_87077343_87077505_87077574_87078198_87078251_87078327_87078387_87078621_87078726_87078856_87078932_87079170_87079270_87079704_87079928_87080540_87080666_87080841_87080935_87081022_87081134_87081239_87081309_87081925
ENSMUST00000027464.9	chr1	+	1424	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	2.44948974278318	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTTTCCTTTCTTTAT	NA	False	NA	13	True	AATAAA	-15	NA	79753734	79759162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ENSMUST00000027467.11	chr1	-	2210	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	6.12244844812923	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGTGGTGGTGCAC	NA	False	NA	NA	False	TATAAA	-35	NA	79836413	79771913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
ENSMUST00000027472.7	chr1	+	1854	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	0.942809041582063	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCAGTGTGCCTTTTTGGT	1408	False	NA	NA	False	AATAAA	-25	NA	87192084	87238561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
ENSMUST00000027475.15	chr1	+	5724	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	29.4000164861817	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254724	87378518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ENSMUST00000027477.15	chr1	-	2746	13	FSM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.91578004149024	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTAGAGACCTATTT	NA	False	NA	NA	False	NA	NA	NA	87438084	87404555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
ENSMUST00000027478.7	chr1	-	2020	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	0	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTGGTAGCACTGGGC	NA	False	NA	1	True	NA	NA	NA	92401582	92366731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ENSMUST00000027478.7-0	chr1	-	1451	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	93	476	0	-207	multi-exon	FALSE	canonical	3	1166	junction_5	87.5025220095095	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401489	92367207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ENSMUST00000027487.15	chr1	+	3337	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.72334124585985	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTTTAGTCTCTGTG	6657	False	NA	NA	False	AAAAAG	-18	NA	92838504	92848563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ENSMUST00000027488.11	chr1	+	2902	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	15.6743724089108	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTAGTCTTGTTCCAAA	2260	False	NA	NA	False	AATAAA	-14	NA	92862097	92875663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
ENSMUST00000027492.14	chr1	-	1366	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	7.36357401145817	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGAGTCTTTTTCTCT	NA	False	NA	1	True	AATAAA	-39	NA	93233637	93228926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
ENSMUST00000027493.4	chr1	-	5779	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93270511	93236499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ENSMUST00000027493.4-0	chr1	-	4719	18	FSM	ENSMUSG00000026274.12	ENSMUST00000027493.4	5779	18	0	1060	0	0	multi-exon	FALSE	canonical	3	108	junction_17	39.6765468974106	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAAGGAGTGTTTAAGT	NA	False	NA	-9	True	ATTAAA	-27	NA	93270511	93237559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270247
ENSMUST00000027494.11-1	chr1	+	3645	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	801	5869	0	-5869	multi-exon	FALSE	canonical	3	496	junction_6	62.1028617061949	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGATAGACTTGAGCTG	NA	False	NA	20	True	AATAAA	-22	NA	93271376	93295342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ENSMUST00000027495.15	chr1	+	3779	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_1	78.56892762975	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATTTTTACGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	93406685	93437982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000027498.14	chr1	-	2005	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	93	2151	0	0	multi-exon	TRUE	canonical	3	133	junction_7	20.1461601451751	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGTACAGAGCCTGGC	NA	False	NA	-36	True	AATAAA	-19	NA	93563351	93549623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ENSMUST00000027499.13	chr1	+	1468	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	2.9474565306379	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGACTCTACTCTGCT	NA	False	NA	6	True	AATAAA	-16	NA	93613381	93623486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
ENSMUST00000027502.16-1	chr1	+	1742	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	0	2431	0	0	multi-exon	FALSE	canonical	3	280	junction_10	29.445217495093	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACATGAATTTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	93682626	93715901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ENSMUST00000027503.14	chr1	-	1003	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	0	0	0	0	multi-exon	FALSE	canonical	3	1212	junction_3	505.005136112495	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCTTTGGTTCTGCCCCT	2310	False	NA	-20	True	AATAAA	-24	NA	93729656	93720297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
ENSMUST00000027505.13	chr1	+	4533	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.6873756509937	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACATTTGAAAGTAGA	NA	False	NA	NA	False	AATAAA	-12	NA	93731686	93749817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
ENSMUST00000027512.13	chr1	+	3130	18	FSM	ENSMUSG00000026289.16	ENSMUST00000027512.13	3130	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	58.4556141318301	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	7245	False	NA	23	True	AATAAA	-32	NA	87683734	87720150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUST00000027517.14	chr1	+	5695	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_21	37.602590545009	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4070	False	NA	20	True	AATAAA	-24	NA	87781008	87872212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ENSMUST00000027521.15	chr1	+	4305	18	FSM	ENSMUSG00000055013.17	ENSMUST00000027521.15	11921	18	0	7616	0	0	multi-exon	FALSE	canonical	3	334	junction_11	41.2693909545293	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCCATGTTAATTTAT	NA	False	NA	39	True	AATAAA	-40	NA	89382527	89817723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ENSMUST00000027532.13	chr1	+	2202	12	FSM	ENSMUSG00000026307.13	ENSMUST00000027532.13	2202	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	10.6693350656825	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGAAGTGGCCTGGGC	NA	False	NA	15	True	ATTAAA	-24	NA	91226059	91248797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ENSMUST00000027534.13	chr1	-	1368	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_9	38.9197096809944	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	-8	True	AATAAA	-18	NA	91326505	91303552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ENSMUST00000027538.9	chr1	+	5826	5	FSM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	8.86002257333467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGGCTCTCTAGCTC	8955	False	NA	7	True	AATAAA	-19	NA	91468435	91487311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
ENSMUST00000027554.8	chr8	+	6857	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	24.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGCCATATATATGT	NA	False	NA	6	True	NA	NA	NA	14938110	14951720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_14939119_14944571_14945231_14946530
ENSMUST00000027554.8-0	chr8	+	2333	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	743	3781	-150	2880	multi-exon	FALSE	canonical	3	162	junction_1	24.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938853	14947939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_14939119_14944571_14945231_14946530
ENSMUST00000027579.17	chr1	-	2554	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGGTTTTTCTTCGTGC	NA	False	NA	-3	True	AATAAA	-21	NA	125363464	125320641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ENSMUST00000027579.17-0	chr1	-	2197	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	20	337	0	242	multi-exon	FALSE	canonical	3	364	junction_12	606.954190107366	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTCAGGCTCTTT	NA	False	NA	-3	True	AATAAA	-20	NA	125363444	125320978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ENSMUST00000027580.11	chr1	+	2733	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	11.5808270669912	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTAAGCGATGACAT	NA	False	NA	NA	False	TTTAAA	-41	NA	125488752	125523557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ENSMUST00000027587.15	chr1	+	6738	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCTGAAACATGTTT	NA	False	NA	8	True	AATAAA	-22	NA	127701900	127735798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ENSMUST00000027587.15-0	chr1	+	4556	9	FSM	ENSMUSG00000026349.15	ENSMUST00000027587.15	6738	9	53	2129	53	0	multi-exon	FALSE	canonical	3	399	junction_6	47.8289595851718	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701953	127733669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898
ENSMUST00000027592.6	chr1	+	4113	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCATTTTGCTCTTTCC	94	False	NA	NA	False	NA	NA	NA	128171898	128207115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUST00000027592.6-0	chr1	+	2186	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	142	1785	142	573	multi-exon	FALSE	canonical	3	326	junction_2	38.8918550456119	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGATCTTATTTTTGC	236	False	NA	15	True	AATAAA	-18	NA	128172040	128205330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUST00000027601.11	chr1	-	2910	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_6	235.478734443261	7070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287401	128259326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ENSMUST00000027602.15	chr1	-	2175	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	0	0	0	0	multi-exon	TRUE	canonical	3	1712	junction_8	135.919976456737	3001	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTGTTGTGTGACTTT	NA	False	NA	-4	True	AATAAA	-14	NA	128345096	128291443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ENSMUST00000027623.9	chr1	-	3089	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	235	3739	55	1133	multi-exon	FALSE	canonical	0	0	junction_5	408.588007655633	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCTGCTGTTTGAA	NA	False	NA	-4	True	AATAAA	-24	NA	118238911	118226246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ENSMUST00000027626.13	chr1	+	1889	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_6	29.1985539976821	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGGGACTTTTTTTAA	NA	False	NA	6	True	NA	NA	NA	118249568	118261552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ENSMUST00000027629.10	chr1	+	9269	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	0	0	0	0	multi-exon	FALSE	canonical	3	1477	junction_7	202.362891350955	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555675	118612898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ENSMUST00000027634.13	chr1	-	569	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	2709	junction_1	24.2532930181083	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTGTCTGGGTGCGT	NA	False	NA	-1	True	ATTAAA	-29	NA	120048808	120041009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
ENSMUST00000027642.5	chr1	-	3737	8	FSM	ENSMUSG00000026393.11	ENSMUST00000027642.5	3737	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	49.1424418587104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGTATCTATCAGGTC	NA	False	NA	-12	True	AATAAA	-16	NA	138547412	138411849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_138414849_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ENSMUST00000027649.14	chr1	-	4733	9	FSM	ENSMUSG00000026398.15	ENSMUST00000027649.14	4733	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.824227601599	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAAATCCTTTATGTT	NA	False	NA	-14	True	AATAAA	-23	NA	136888186	136770308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136887964
ENSMUST00000027650.13	chr1	-	2533	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	13.0705587551887	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTGTCTCCTGTAATA	NA	False	NA	NA	False	TTTAAA	-45	NA	130390481	130366763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ENSMUST00000027655.8	chr1	+	2166	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	8.75750407085377	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTATTTATTTCAGTCCT	NA	False	NA	10	True	AATAAA	-16	NA	136343008	136367896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
ENSMUST00000027677.8	chr1	+	1823	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	35.0884596413123	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTCCTGTCTGTCT	NA	False	NA	24	True	AATAAA	-17	NA	135656884	135679970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUST00000027684.11	chr1	+	1713	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_3	43.3720980457354	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135074561	135084007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ENSMUST00000027687.8	chr1	+	1116	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	158.492902049272	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890302	134901900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ENSMUST00000027693.8	chr1	+	1226	6	FSM	ENSMUSG00000026433.14	ENSMUST00000027693.8	1226	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	27.6506781110337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGTTGTGATGCTGGG	NA	False	NA	15	True	ATTAAA	-17	NA	131794977	131800625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131795149_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUST00000027697.12	chr1	-	2938	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	0	1417	0	932	multi-exon	FALSE	canonical	3	137	junction_4	13.6323145503616	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	597	False	NA	-2	True	AATATA	-23	NA	132067422	132041391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ENSMUST00000027706.4	chr1	+	3428	2	FSM	ENSMUSG00000026443.4	ENSMUST00000027706.4	3428	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTGAGTGCTGGGTAT	NA	False	NA	22	True	AATAAA	-35	NA	132808010	132867743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_132808414_132864718
ENSMUST00000027725.11	chr1	+	3408	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	24.9889231659096	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTGGATTTATTGT	NA	False	NA	NA	False	NA	NA	NA	134383268	134418756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ENSMUST00000027726.14	chr1	+	1837	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	53.3666562565053	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	7971	False	NA	43	True	AATAAA	-31	NA	134333518	134339478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUST00000027727.15	chr1	+	3123	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTTGGTTCCATTC	NA	False	NA	8	True	NA	NA	NA	134343115	134361089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUST00000027727.15-0	chr1	+	2107	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	0	1016	0	-1013	multi-exon	FALSE	canonical	3	879	junction_4	75.4485904170407	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343115	134360073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUST00000027736.13	chr1	-	4395	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_16	98.6493157604248	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589118	133547608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ENSMUST00000027741.12	chr1	-	7492	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	3.69569523436472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCCTTTTTCATTAT	NA	False	NA	0	True	AAGAAA	-20	NA	155293075	155151446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
ENSMUST00000027741.12-0	chr1	-	4501	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	-86	3077	0	204	multi-exon	FALSE	canonical	2	7	junction_5	3.69569523436472	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCTGTGAATTGTCAG	NA	False	NA	-2	True	AATAAA	-21	NA	155293161	155154523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
ENSMUST00000027743.13	chr1	+	2452	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	0	2137	0	1275	multi-exon	TRUE	canonical	3	152	junction_7	29.3257565972304	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTATTTTATCTTGTT	NA	False	NA	12	True	AATAAA	-22	NA	155034460	155079268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ENSMUST00000027752.15	chr1	-	7622	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	0	0	0	0	multi-exon	TRUE	canonical	3	518	junction_2	111.881330429904	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153208532	153094667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ENSMUST00000027753.13	chr1	-	5164	24	FSM	ENSMUSG00000026479.14	ENSMUST00000027753.13	5164	24	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_23	24.3679264856456	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153062193	152998501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654_153061848_153061999
ENSMUST00000027754.7	chr1	+	1969	15	FSM	ENSMUSG00000026480.13	ENSMUST00000027754.7	2596	15	-108	735	-55	-735	multi-exon	FALSE	canonical	0	0	junction_10	6.91382820210072	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACAACTCAGAAGATTT	451	False	NA	NA	False	ATTAAA	-22	NA	152683532	152712006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_152683957_152686668_152686752_152692741_152692851_152697266_152697402_152699967_152700076_152701632_152701693_152703168_152703213_152706102_152706245_152706443_152706513_152707364_152707441_152709073_152709097_152709527_152709680_152709819_152709932_152710777_152710956_152711752
ENSMUST00000027766.13	chr1	-	2603	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	39	1384	0	397	multi-exon	FALSE	canonical	3	14	junction_5	4.06390281902126	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCATTTCCTATGCGT	3904	False	NA	-10	True	AATAAA	-14	NA	180023546	179994186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
ENSMUST00000027768.14	chr1	-	8506	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTCAAGTTAATAATTA	NA	False	NA	-1	True	AATAAA	-19	NA	179631245	179572458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ENSMUST00000027768.14-0	chr1	-	7309	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	0	1197	0	0	multi-exon	FALSE	canonical	3	225	junction_19	31.9958415665383	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTGTCTGGTAGATT	NA	False	NA	-7	True	AATAAA	-14	NA	179631245	179573655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ENSMUST00000027769.6	chr1	-	2449	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	6.92820323027551	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTATATGTGTGT	7878	False	NA	NA	False	AATAAA	-15	NA	179373832	179355619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ENSMUST00000027775.9	chr1	+	3580	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	10.1447851956888	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGACTCTGCTTTGTGT	NA	False	NA	8	True	NA	NA	NA	178233667	178312078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ENSMUST00000027777.12	chr1	+	3873	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_6	226.960257925668	4265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3147	False	NA	10	True	ATTAAA	-18	NA	180396493	180428819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUST00000027778.8	chr1	-	2294	2	FSM	ENSMUSG00000026497.8	ENSMUST00000027778.8	2294	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAGTTTATTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	180524599	180520607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_180522487_180524184
ENSMUST00000027780.6	chr1	+	3471	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	19.761847389475	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTGTCTTTCTTCATT	NA	False	NA	20	True	AATACA	-14	NA	180553607	180581769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ENSMUST00000027781.7	chr1	+	471	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	43.5150037981793	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTTACATGAAATCC	NA	False	NA	20	True	ATTAAA	-23	NA	178146694	178150258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
ENSMUST00000027783.14	chr1	+	3941	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	158	4703	-157	1697	multi-exon	FALSE	canonical	3	163	junction_4	12.7573508221731	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015255	178080164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ENSMUST00000027785.15	chr1	+	2776	18	FSM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	3.6941925807312	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTGTTCCGTTTCCT	NA	False	NA	7	True	AATAAA	-17	NA	176642225	176848003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
ENSMUST00000027792.6	chr1	+	1367	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_2	65.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATAGGTTTCTTT	NA	False	NA	26	True	AATAAA	-34	NA	181952314	181959972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_181952541_181956248_181956318_181958900
ENSMUST00000027797.9	chr1	-	3102	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	0	6290	0	-169	multi-exon	FALSE	canonical	3	480	junction_18	71.7805568876937	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAACAGATATCTATTA	NA	False	NA	-11	True	AATAAA	-12	NA	180971769	180920992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ENSMUST00000027800.15	chr1	+	3306	23	FSM	ENSMUSG00000026519.17	ENSMUST00000027800.15	3306	23	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	9.65307299163423	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCATGCTTCTTCCGGGT	NA	False	NA	15	True	AATAAA	-31	NA	180770023	180802677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ENSMUST00000027802.9	chr1	+	1580	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_3	51.6120679255884	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	16	False	NA	32	True	NA	NA	NA	180731857	180735653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ENSMUST00000027809.8	chr1	-	1913	4	FSM	ENSMUSG00000026525.10	ENSMUST00000027809.8	1913	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTGTCATGTGTGTAG	NA	False	NA	NA	False	AATAAA	-30	NA	175520342	175489986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_175490721_175491092_175491345_175492875_175493196_175519735
ENSMUST00000027810.14	chr1	-	2636	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAATAGACTAATTTTTAT	792	False	NA	NA	False	AATAAA	-21	NA	175453201	175427939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ENSMUST00000027810.14-0	chr1	-	1570	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	62	1004	0	0	multi-exon	FALSE	canonical	3	699	junction_3	99.2506491566916	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTTTTAAAATTTAATT	854	False	NA	-16	True	AATAAA	-37	NA	175453139	175428943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ENSMUST00000027833.12	chr1	+	4351	33	FSM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_16	205.587019193668	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGCCGTTTCCCTGTT	3067	False	NA	15	True	AATAAA	-20	NA	171910398	171949897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938216_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUST00000027837.13	chr1	-	5698	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGGTTTTCTGTTGCTT	NA	False	NA	-7	True	AATAAA	-15	NA	171854862	171828526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ENSMUST00000027837.13-0	chr1	-	2229	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	0	3469	0	0	multi-exon	FALSE	canonical	3	70	junction_3	8.90768986749708	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTCTTCCTCAGTTTTT	NA	False	NA	30	True	NA	NA	NA	171854862	171831995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ENSMUST00000027846.8	chr1	+	2215	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	12.2357789173508	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTTCCTGTTTATTCAA	NA	False	NA	15	True	AATAAA	-15	NA	166206665	166221190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ENSMUST00000027853.6	chr1	+	1025	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCCCCCACTTCATCTT	NA	False	NA	107	True	AATAAA	-16	NA	165288605	165308783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ENSMUST00000027853.6-0	chr1	+	743	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	187	95	0	0	multi-exon	FALSE	canonical	3	408	junction_4	28.8704000665041	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTCTTTACATTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	165288792	165308688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ENSMUST00000027856.13	chr1	-	3260	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	-10	860	0	-53	multi-exon	FALSE	canonical	3	29	junction_4	5.55583332638924	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGCATGTTTGTTGCTT	NA	False	NA	-7	True	AATAAA	-14	NA	165288044	165157126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ENSMUST00000027863.13	chr1	-	2580	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_5	105.155123508082	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285924	164264677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ENSMUST00000027867.7	chr1	+	1909	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_1	8.97552226892675	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCATCTTGTAG	NA	False	NA	20	True	AATAAA	-20	NA	164103153	164115416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
ENSMUST00000027876.11	chr1	+	4368	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGTTCTTGTCTGT	NA	False	NA	NA	False	AATAAA	-30	NA	163757333	163782695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ENSMUST00000027876.11-1	chr1	+	3235	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	25	1108	0	216	multi-exon	FALSE	canonical	3	75	junction_8	12.9505203112215	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTCTTTTATGTGCTA	NA	False	NA	10	True	AATAAA	-19	NA	163757358	163781587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ENSMUST00000027877.7	chr1	+	3946	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	20.2454468052323	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAACTCTCATTTTTATG	NA	False	NA	18	True	ATTAAA	-25	NA	163607151	163744678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUST00000027886.14	chr1	-	4237	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCGACTGGGATATTGTA	NA	False	NA	-2	True	ATTAAA	-18	NA	156767113	156634329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUST00000027886.14-0	chr1	-	2940	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	-65	1362	0	0	multi-exon	FALSE	canonical	3	179	junction_5	32.038605185342	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACCTTTTCTTGTATG	NA	False	NA	-37	True	AATAAA	-32	NA	156767178	156635691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUST00000027897.8	chr1	-	1680	12	FSM	ENSMUSG00000026603.14	ENSMUST00000027897.8	1680	12	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_3	24.6985126865085	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	189654560	189612688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ENSMUST00000027916.13	chr1	+	2200	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	39.6957176531676	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064345	185089974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUST00000027921.11	chr1	-	3496	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	0	1975	0	-1132	multi-exon	TRUE	canonical	3	288	junction_20	32.2887284275964	656	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGCTCTATGATATCTG	NA	False	NA	-1	True	ATTAAA	-18	NA	185061593	185018897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ENSMUST00000027929.10	chr1	-	4221	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGAATCACCTGTTTGC	3256	False	NA	-6	True	AATAAA	-26	NA	184731767	184628985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ENSMUST00000027929.10-0	chr1	-	3149	18	FSM	ENSMUSG00000026620.12	ENSMUST00000027929.10	4221	18	-384	1456	-384	-1456	multi-exon	FALSE	canonical	3	41	junction_17	8.12446431558567	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATAGTTGTCTAGATC	2872	False	NA	-4	True	AATAAA	-18	NA	184732151	184630441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ENSMUST00000027931.8	chr1	+	3227	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_7	41.1061344049071	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGATGTTTGTATTCT	NA	False	NA	29	True	TATAAA	-40	NA	191553555	191565162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ENSMUST00000027933.11	chr1	-	4212	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_7	26.7651349516417	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTGGAAGAGTGTGTT	NA	False	NA	-6	True	NA	NA	NA	191307656	191269476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUST00000027940.6	chr1	+	2246	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	21.6248156769306	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTGCTACCTTTGTCT	NA	False	NA	6	True	AATAAA	-15	NA	191058108	191083111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUST00000027940.6-0	chr1	+	1533	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	0	713	0	-713	multi-exon	TRUE	canonical	3	75	junction_7	21.6248156769306	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGACTTTTTTGTTTTT	NA	False	NA	7	True	NA	NA	NA	191058108	191082398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUST00000027941.14	chr1	-	1984	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	6.37704215656966	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTAGTGTGGCACTGGTTT	NA	False	NA	0	True	AATAAA	-23	NA	190915537	190902492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
ENSMUST00000027943.6	chr1	+	801	3	FSM	ENSMUSG00000026630.10	ENSMUST00000027943.6	801	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTCCTTTGTCCATCT	NA	False	NA	NA	False	AATAAA	-12	NA	190830521	190841140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_190830725_190832924_190833030_190840647
ENSMUST00000027945.6	chr1	-	1196	10	FSM	ENSMUSG00000026632.18	ENSMUST00000027945.6	1196	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	9.99011857466179	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATTTTTAAAAAAGGAA	NA	False	NA	-4	True	TATAAA	-16	NA	190795102	190778038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190778518_190781478_190781557_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUST00000027952.12	chr1	+	6740	32	FSM	ENSMUSG00000026640.13	ENSMUST00000027952.12	11040	32	0	4300	0	-1658	multi-exon	TRUE	canonical	1	2	junction_18	4.73677577525654	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTCCATCCCGTCCAA	NA	False	NA	NA	False	NA	NA	NA	194302132	194494877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483350_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
ENSMUST00000027956.9	chr2	-	4327	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	33.2024095511154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTGTTCTGTATTT	NA	False	NA	-2	True	AATAAA	-16	NA	3476068	3456851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ENSMUST00000027961.12	chr2	-	1795	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_5	73.9537677425134	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	3942	False	NA	-5	True	ATTAAA	-20	NA	3513851	3489886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ENSMUST00000027965.11	chr2	+	3156	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	8.49836585598797	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTTTGTCTCGTTTGT	944	False	NA	19	True	AATAAA	-25	NA	3714494	3783179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
ENSMUST00000027970.14	chr1	-	1374	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	62.7917191992702	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTGTTAGATGGTTT	NA	False	NA	-2	True	ATTAAA	-16	NA	170713109	170701756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ENSMUST00000027973.14	chr2	+	5319	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATGTCTCTGTTTACT	4092	False	NA	NA	False	AATAAA	-17	NA	4886374	4915368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUST00000027973.14-1	chr2	+	3245	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	0	2074	0	346	multi-exon	FALSE	canonical	3	382	junction_1	74.2242169039189	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAGTGCAGAAACTATAC	4092	False	NA	6	True	AATAAA	-15	NA	4886374	4913294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUST00000027974.7	chr1	-	7246	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTCTGTACAAAGACA	NA	False	NA	2	True	AATAAA	-18	NA	170695340	170532242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
ENSMUST00000027974.7-1	chr1	-	4516	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	0	2730	0	-2730	multi-exon	FALSE	canonical	3	52	junction_10	11.1705963234835	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGCTCAGTGGTTAA	NA	False	NA	NA	False	AATAAA	-11	NA	170695340	170534972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
ENSMUST00000027975.8	chr2	+	1438	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_4	31.960669188864	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATATTAAGTCAATTTCT	991	False	NA	9	True	AATAAA	-20	NA	4923829	4943541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ENSMUST00000027979.14	chr1	-	7864	8	FSM	ENSMUSG00000026667.15	ENSMUST00000027979.14	7864	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	8.63311138842179	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTCTTATTTCTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	170042966	170020988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
ENSMUST00000027980.8	chr2	-	3494	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_19	72.612354435182	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017602	4995534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ENSMUST00000027981.8	chr1	-	2283	11	FSM	ENSMUSG00000026670.16	ENSMUST00000027981.8	2283	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	76.9519330491444	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGTTTCTACCTTA	NA	False	NA	-5	True	AATAAA	-15	NA	170002515	169969571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_169970142_169970965_169971033_169975564_169975613_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUST00000027985.8	chr1	-	2928	18	FSM	ENSMUSG00000026674.10	ENSMUST00000027985.8	2928	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.44306132392045	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACTGCTCACCCACATC	NA	False	NA	NA	False	NA	NA	NA	169938070	169805372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_169805559_169809545_169809696_169811940_169812176_169812445_169812635_169814585_169814714_169815977_169816202_169818001_169818213_169822153_169822285_169823120_169823184_169825499_169825744_169829397_169829582_169831732_169831839_169832223_169832372_169832641_169832874_169834330_169834434_169863481_169863591_169916363_169916514_169937935
ENSMUST00000027986.5	chr2	-	2411	15	FSM	ENSMUSG00000026672.12	ENSMUST00000027986.5	2411	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	40.4028817925511	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTATCTGATTTA	NA	False	NA	-2	True	AGTAAA	-15	NA	5068749	5025454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5026040_5026133_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ENSMUST00000027988.8	chr2	+	2670	3	FSM	ENSMUSG00000026676.8	ENSMUST00000027988.8	2670	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	4	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGTCTTTGGATCG	4727	False	NA	NA	False	AATAAA	-42	NA	5142586	5235689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_5143119_5146041_5146217_5233726
ENSMUST00000027989.13	chr1	-	4612	9	FSM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	8.48528137423857	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAGACTCAGTTAATTT	NA	False	NA	-1	True	AATAAA	-18	NA	169796810	169777103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
ENSMUST00000028000.13	chr1	-	2068	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_14	29.0531708199618	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169358997	169325879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ENSMUST00000028004.11	chr1	+	2835	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_2	45.3586816386896	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTGCCGTCTTAATT	NA	False	NA	6	True	ATTAAA	-18	NA	167177559	167196101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUST00000028005.3	chr1	-	620	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	53	424	53	-424	multi-exon	FALSE	canonical	3	373	junction_1	22.7912263820971	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTAAAGCTCCTGCCTG	5009	False	NA	-9	True	AATAAA	-22	NA	167221357	167199958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
ENSMUST00000028017.16	chr1	-	4541	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTTTGTGGTCC	NA	False	NA	NA	False	NA	NA	NA	162376120	162359695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
ENSMUST00000028017.16-0	chr1	-	2976	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	13	1552	0	0	multi-exon	FALSE	canonical	3	51	junction_6	17.6704526812185	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAAAGTTGGTTTATCT	NA	False	NA	-11	True	NA	NA	NA	162376107	162361247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
ENSMUST00000028021.7	chr1	+	1477	2	FSM	ENSMUSG00000026698.9	ENSMUST00000028021.7	2196	2	12	707	12	-707	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTGTCTAGTATTTT	NA	False	NA	10	True	ATTAAA	-13	NA	161796768	161799192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_161796849_161797795
ENSMUST00000028034.15	chr2	-	2897	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTTGAAAAATATCAT	978	False	NA	NA	False	NA	NA	NA	15054091	14999941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ENSMUST00000028034.15-0	chr2	-	2454	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	-32	475	0	-475	multi-exon	FALSE	canonical	3	48	junction_2	8.53287759199674	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAAAGGTGAAGTCT	946	False	NA	-7	True	AATAAA	-19	NA	15054123	15000416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ENSMUST00000028035.14	chr1	+	4883	4	FSM	ENSMUSG00000026708.17	ENSMUST00000028035.14	4883	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	20.7417989148054	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGCTGGTCTTGTCTTT	NA	False	NA	8	True	NA	NA	NA	160898282	160914290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477
ENSMUST00000028052.12	chr1	-	6338	9	FSM	ENSMUSG00000026721.17	ENSMUST00000028052.12	6338	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	6.01949956391725	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTCTAATTTTTTTCA	NA	False	NA	-9	True	AATAAA	-17	NA	160179141	160046743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160178790
ENSMUST00000028059.9	chr2	-	1546	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_5	20.3588893361106	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACACGTTTCTTCTTG	7043	False	NA	-7	True	AATAAA	-12	NA	13276226	13081822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ENSMUST00000028062.8	chr2	+	2193	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	35.7786161694384	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	10	False	NA	14	True	AATAAA	-14	NA	13578762	13587637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUST00000028071.13	chr2	+	3594	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	5.61303597347337	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTGGTTTGCTTCTTAA	4655	False	NA	10	True	AATAAA	-15	NA	18681828	18691440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ENSMUST00000028081.13	chr2	+	2797	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	0	4150	0	0	multi-exon	FALSE	canonical	3	34	junction_8	9.12179261942059	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGGTTCAAATGTTC	99	False	NA	14	True	AATAAA	-27	NA	16361114	16756500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ENSMUST00000028083.6	chr2	-	1160	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	0	0	0	0	multi-exon	FALSE	canonical	3	1531	junction_5	118.933011500129	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTTGTAATGTTGG	2213	False	NA	-18	True	AATAAA	-24	NA	38534099	38478047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUST00000028087.6	chr2	-	4115	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATCTCATGCAGTATAC	NA	False	NA	NA	False	AATAAA	-29	NA	39116463	39084365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ENSMUST00000028087.6-0	chr2	-	3422	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	131	562	0	-562	multi-exon	FALSE	canonical	3	417	junction_2	25.493463214453	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTCTACTTTGAATTG	NA	False	NA	-15	True	AATAAA	-20	NA	39116332	39084927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ENSMUST00000028098.11	chr2	-	4066	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839288	48792835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000028098.11-0	chr2	-	1684	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	0	2382	0	110	multi-exon	FALSE	canonical	3	352	junction_6	44.7134201423734	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839288	48795217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000028100.13	chr18	-	3965	14	FSM	ENSMUSG00000024240.14	ENSMUST00000028100.13	3965	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	6.05888266692776	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTGCAGTGGTCTTTGCC	-18	True	NA	-1	True	AATAAA	-27	NA	6490856	6435952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ENSMUST00000028102.14	chr2	+	6856	26	FSM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_25	6.95056832208705	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGGTGTCCTTATTT	NA	False	NA	17	True	AATAAA	-18	NA	49509309	49664790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
ENSMUST00000028105.13	chr2	-	2344	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_11	25.5990473355904	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424281	12352073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ENSMUST00000028117.4	chr2	+	4707	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	0	0	0	0	multi-exon	TRUE	canonical	3	665	junction_5	65.7463325738674	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATTCCAACTGAAGCAT	7073	False	NA	24	True	AATAAA	-26	NA	23046380	23089272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUST00000028117.4-0	chr2	+	2923	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	149	1635	0	-1635	multi-exon	FALSE	canonical	3	665	junction_5	65.7463325738674	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCATTTTTTCAAATATT	7222	False	NA	22	True	ATTAAA	-14	NA	23046529	23087637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUST00000028119.7	chr2	-	5590	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_2	17.5310821963508	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTGGCTGTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	23046036	23005617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUST00000028119.7-0	chr2	-	4523	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	127	940	0	-940	multi-exon	FALSE	canonical	3	112	junction_2	17.5310821963508	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGCAGCAGTGTTGTT	NA	False	NA	NA	False	AAAAAG	-31	NA	23045909	23006557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUST00000028121.15	chr2	+	3630	13	FSM	ENSMUSG00000026781.18	ENSMUST00000028121.15	3630	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	26.6993289553627	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22958179	23004525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUST00000028125.12	chr2	-	4998	3	FSM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	8.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTGTTTTCACTCAT	NA	False	NA	-1	True	AATAAA	-25	NA	33358544	33340298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33345136_33354925_33354987_33358444
ENSMUST00000028129.13	chr2	-	2108	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	8.32666399786453	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	3950	False	NA	-13	True	AATAAA	-15	NA	32872094	32863001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ENSMUST00000028132.14	chr2	-	3981	25	FSM	ENSMUSG00000026792.17	ENSMUST00000028132.14	3981	25	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_16	3.79601399131012	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTTTGCATAGATTCT	NA	False	NA	-1	True	AATAAA	-25	NA	32851267	32815227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055
ENSMUST00000028135.15	chr2	+	3714	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	0	0	0	0	multi-exon	TRUE	canonical	3	292	junction_12	30.0169577319103	880	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCATGTGCTGCTGGG	8857	False	NA	19	True	AATAAA	-19	NA	32766125	32815266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUST00000028137.10	chr2	+	1991	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTAAAATGAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	29678270	29687755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ENSMUST00000028137.10-0	chr2	+	1222	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	12	757	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.3884877605162	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGCTGGTTGTCCTAG	NA	False	NA	27	True	AATAAA	-17	NA	29678282	29686998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ENSMUST00000028139.11	chr2	+	1254	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	14.0393034305954	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTGTTCTGCTTCTT	NA	False	NA	32	True	AATAAA	-20	NA	29236830	29414805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ENSMUST00000028148.11	chr2	-	2273	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	41.2442327446381	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTATTCTCCTAGCTCCC	NA	False	NA	-13	True	AATAAA	-20	NA	32584197	32572620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ENSMUST00000028151.7	chr2	+	869	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	58.5965490072202	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCATCCTTGCTCTG	4773	False	NA	23	True	AATAAA	-24	NA	32460869	32463591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
ENSMUST00000028155.12	chr2	+	3973	23	FSM	ENSMUSG00000026812.17	ENSMUST00000028155.12	7674	23	13	3688	0	-1069	multi-exon	FALSE	canonical	3	21	junction_1	11.5017066645932	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGTCCAATATGCCA	3465	False	NA	29	True	NA	NA	NA	28531261	28577491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ENSMUST00000028157.9	chr2	-	2739	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_7	20.5992858738452	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGTTTGATGCCCT	NA	False	NA	-49	True	AATAAA	-22	NA	28473291	28456322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
ENSMUST00000028160.15	chr2	-	3294	11	FSM	ENSMUSG00000026819.16	ENSMUST00000028160.15	3294	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	31.7200252206709	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGAGCCAGGGTTTTTC	8176	False	NA	-6	True	AATAAA	-17	NA	32341434	32304498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32341078
ENSMUST00000028162.5	chr2	+	1574	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	372	3032	-172	1164	multi-exon	FALSE	canonical	3	184	junction_6	7.22649446289293	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTGACAATGGTGCT	7464	False	NA	20	True	AATAAA	-20	NA	32286279	32292752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
ENSMUST00000028167.3	chr2	+	5620	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	27.9815089612766	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGGCATTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	57128393	57260731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUST00000028170.15	chr2	+	3590	18	FSM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	10.8097738677858	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTTTTACTGTTTTT	NA	False	NA	25	True	ATTAAA	-26	NA	28403337	28443093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ENSMUST00000028172.2	chr2	+	1084	6	FSM	ENSMUSG00000026829.10	ENSMUST00000028172.2	1084	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.13541565040626	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCCAAGCCCAGCTTAC	5430	False	NA	NA	False	AAAAAG	-45	NA	28387757	28395427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28387849_28388387_28388454_28392078_28392130_28392208_28392245_28393137_28393273_28394722
ENSMUST00000028177.11	chr2	+	2757	6	FSM	ENSMUSG00000026833.19	ENSMUST00000028177.11	2757	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	5.85149553533112	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTTGCTTATTGTCT	203	False	NA	NA	False	AATAAA	-16	NA	28095670	28120748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28096112_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
ENSMUST00000028190.13	chr2	+	5794	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	30.1131200641846	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGGTCCTGATGTGTC	NA	False	NA	NA	False	CATAAA	-17	NA	31649954	31694239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUST00000028200.9	chr2	-	1401	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	220.841996685413	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	False	NA	-8	True	TTTAAA	-30	NA	30857945	30850638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
ENSMUST00000028205.10	chr2	-	1325	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	0	659	0	-659	multi-exon	FALSE	canonical	3	349	junction_7	16.1240309786356	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30871953	30862847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ENSMUST00000028207.13-1	chr2	-	2784	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	213	836	0	561	multi-exon	FALSE	canonical	3	47	junction_2	7.8897731722819	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATTCAGCTGAGGGGC	NA	False	NA	-5	True	AATAAA	-19	NA	30305612	30291948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ENSMUST00000028209.15	chr2	+	2251	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_6	27.7995742149158	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGCATACATTACTTG	NA	False	NA	9	True	AATAAA	-16	NA	30282265	30290541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
ENSMUST00000028214.15	chr2	-	1810	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	55.8	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249328	30234820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000028214.15-0	chr2	-	1409	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	11	390	0	-58	multi-exon	FALSE	canonical	3	213	junction_5	55.8	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCCCCAGGCCCCTC	NA	False	NA	-14	True	ATTAAA	-14	NA	30249317	30235210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000028220.10	chr2	-	2030	7	FSM	ENSMUSG00000035949.16	ENSMUST00000028220.10	2030	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	71.5238887831658	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGAGTCTGCTGGTTG	9358	False	NA	NA	False	NA	NA	NA	34716085	34695189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973
ENSMUST00000028222.13	chr2	+	2464	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	125	1083	0	-67	multi-exon	FALSE	canonical	3	1920	junction_1	305.196632312678	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTGTGAAAAGTTTG	NA	False	NA	31	True	AATAAA	-22	NA	34662106	34666476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ENSMUST00000028224.15	chr2	-	5695	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	0	0	0	0	multi-exon	FALSE	canonical	2	111	junction_18	27.1558465159899	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	5780	False	NA	NA	False	NA	NA	NA	34644573	34566996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ENSMUST00000028225.12	chr2	-	2029	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	0	2368	0	0	multi-exon	FALSE	canonical	3	516	junction_4	38.498997902623	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	NA	False	NA	-14	True	AATAAA	-14	NA	34760974	34742113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ENSMUST00000028232.7	chr2	-	3741	15	FSM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.03871569806491	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGCGTGTCCTTGGAGC	3687	False	NA	-17	True	ATTAAA	-28	NA	34803988	34783768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
ENSMUST00000028235.11	chr2	+	2734	11	FSM	ENSMUSG00000057110.16	ENSMUST00000028235.11	2734	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	5.89576118919347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTAAGCCTTGGTATT	NA	False	NA	NA	False	TATAAA	-15	NA	34999503	35020739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632
ENSMUST00000028238.15	chr2	-	3081	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_1	102.482054178141	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9552	False	NA	NA	False	AATAAA	-26	NA	35091132	35070216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ENSMUST00000028241.7	chr2	-	2787	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	5.5876848714134	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGAGTCTTGTTTCT	NA	False	NA	0	True	AATAAA	-20	NA	35226988	35203997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
ENSMUST00000028250.9	chr2	+	1319	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	245	1059	0	-1059	multi-exon	FALSE	canonical	3	141	junction_1	20.1941960858945	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGATAGAGTGGTT	NA	False	NA	18	True	AATAAA	-19	NA	36026645	36079600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUST00000028251.10	chr2	-	2617	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	16.6300932047899	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGGTCTTATTGTCT	NA	False	NA	-23	True	AATAAA	-16	NA	36026785	36006090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ENSMUST00000028252.14	chr2	-	1986	14	FSM	ENSMUSG00000026888.15	ENSMUST00000028252.14	1986	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	3.05182068075037	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCGTGTTCTTGTGTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	64853126	64742819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_64743198_64745059_64745154_64747172_64747261_64747378_64747452_64747542_64747660_64753880_64753962_64760243_64760340_64760529_64760641_64763563_64763702_64766760_64766836_64768712_64768835_64783905_64784063_64851430_64851564_64852803
ENSMUST00000028257.3	chr2	+	3330	8	FSM	ENSMUSG00000026893.5	ENSMUST00000028257.3	3330	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_6	22.3332825667003	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTCCAATTCCCAGACT	NA	False	NA	NA	False	TTTAAA	-18	NA	62494628	62524453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_62494804_62502620_62502795_62509499_62509570_62516308_62516353_62516620_62516769_62520304_62520419_62520734_62520794_62521907
ENSMUST00000028278.14	chr2	+	1541	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	0	0	0	0	multi-exon	FALSE	canonical	3	1717	junction_5	150.997564426748	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8547	False	NA	31	True	AATAAA	-17	NA	61542037	61630720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUST00000028280.14	chr2	+	6454	66	FSM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	0	1952	0	133	multi-exon	TRUE	canonical	2	10	junction_13	12.1052973880063	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCCTGGCTTTCA	NA	False	NA	44	True	AGTAAA	-26	NA	27776436	27927574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ENSMUST00000028282.15	chr2	-	5419	12	FSM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_11	79.362022268289	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTGTGGTGCTCT	NA	False	NA	-6	True	AATAAA	-14	NA	27365410	27335590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365153
ENSMUST00000028282.15-0	chr2	-	4258	12	FSM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	87	1074	87	-1053	multi-exon	FALSE	canonical	1	2	junction_11	79.362022268289	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTCCATTTTTTTAAGG	NA	False	NA	5	True	AATAAA	-17	NA	27365323	27336664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365153
ENSMUST00000028286.12	chr2	-	1489	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	292.487674954006	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGAGTTCTTTCTCC	9481	False	NA	1	True	TATAAA	-45	NA	26494344	26483068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ENSMUST00000028288.5	chr2	-	9488	34	FSM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_31	9.72382644510991	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGTGTGGTTTGGTTC	NA	False	NA	0	True	AATAAA	-34	NA	26393834	26347914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ENSMUST00000028288.5-0	chr2	-	8139	34	FSM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	-2	1351	0	-1351	multi-exon	FALSE	canonical	3	26	junction_31	9.72382644510991	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGGTCAGGGTGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	26393836	26349265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ENSMUST00000028293.12	chr2	-	2031	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	70.8147892392543	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279316	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ENSMUST00000028295.9	chr2	-	2916	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	24.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCGGGGCGGCCACCAT	NA	False	NA	NA	False	AATAAA	-18	NA	26242122	26238132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26240571_26241346_26241487_26241784
ENSMUST00000028295.9-0	chr2	-	732	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	10	2174	0	-2174	multi-exon	FALSE	canonical	3	313	junction_2	24.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCGGGCCTGGGCTCCT	NA	False	NA	-23	True	AGTAAA	-16	NA	26242112	26240306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26240571_26241346_26241487_26241784
ENSMUST00000028300.6	chr2	-	2903	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	0	3475	0	2054	multi-exon	FALSE	canonical	3	39	junction_4	3.79473319220206	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	8899	False	NA	NA	False	NA	NA	NA	26012830	25949021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
ENSMUST00000028311.13	chr2	-	2130	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	30	884	0	0	multi-exon	FALSE	canonical	3	80	junction_10	20.6164982477626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436922	25408877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
ENSMUST00000028328.3	chr2	+	1935	9	FSM	ENSMUSG00000015085.9	ENSMUST00000028328.3	1935	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.69096865730859	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGTCCATAGGGTGG	NA	False	NA	NA	False	AATAAA	-19	NA	25285885	25291333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25286102_25287407_25287526_25288012_25288164_25288302_25288463_25288543_25288772_25289293_25289549_25289628_25289749_25290575_25290711_25290781
ENSMUST00000028329.13	chr2	+	2388	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	9	724	0	686	multi-exon	FALSE	canonical	3	90	junction_3	10.077477638554	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTCTGCATCTTTTAAT	6666	False	NA	8	True	NA	NA	NA	25262341	25267501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ENSMUST00000028332.8	chr2	-	1682	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	27.0014145719977	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9001	False	NA	-17	True	AATAAA	-17	NA	25246371	25242301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ENSMUST00000028336.7	chr2	+	2548	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTGTAATGGCAAGG	NA	False	NA	24	True	ATTAAA	-17	NA	53082099	53109232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ENSMUST00000028336.7-0	chr2	+	1770	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	0	778	0	-778	multi-exon	FALSE	canonical	3	497	junction_2	8.2192186706253	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATCAAGGGTTCTTGTT	NA	False	NA	7	True	AATATA	-19	NA	53082099	53108454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ENSMUST00000028341.11	chr2	+	3004	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	48.8355374929182	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGTGGCATCTGTG	NA	False	NA	18	True	ATTAAA	-19	NA	25162489	25175927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUST00000028342.7	chr2	-	862	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	68	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162428	25161050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25161594_25161940_25162141_25162309
ENSMUST00000028347.13	chr2	-	4436	14	FSM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_13	80.5716264093541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCCTGTCGGTTTTTTG	NA	False	NA	0	True	AATAAA	-17	NA	60793536	60580536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ENSMUST00000028350.9	chr2	+	3903	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTTTTTCGAGACAG	NA	False	NA	NA	False	NA	NA	NA	24839803	24852087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ENSMUST00000028350.9-0	chr2	+	1242	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	0	2661	0	148	multi-exon	FALSE	canonical	3	842	junction_1	25.9028955910338	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGTCGTGTAGTCAAG	NA	False	NA	35	True	NA	NA	NA	24839803	24849426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ENSMUST00000028351.9	chr2	+	1666	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	22.9945645751338	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	36	True	ATTAAA	-39	NA	24852411	24862175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ENSMUST00000028362.9	chr2	-	5172	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCAAGAGTTTGTTC	NA	False	NA	NA	False	NA	NA	NA	60213575	60124103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ENSMUST00000028362.9-0	chr2	-	6901	35	FSM	ENSMUSG00000026980.16	ENSMUST00000028362.9	5172	35	-72	-1657	0	0	multi-exon	FALSE	canonical	0	0	junction_19	111.726541471596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213647	60122446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ENSMUST00000028368.14	chr2	-	2072	11	FSM	ENSMUSG00000026988.16	ENSMUST00000028368.14	2072	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	21.0228447171167	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	0	True	AATAAA	-20	NA	59712928	59682707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
ENSMUST00000028378.4	chr2	-	3005	11	FSM	ENSMUSG00000026994.10	ENSMUST00000028378.4	3885	11	213	667	213	653	multi-exon	FALSE	canonical	1	2	junction_3	1.86815416922694	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGGTTCTTTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-28	NA	65955125	65913776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_65914637_65915580_65915734_65921238_65921341_65921505_65921638_65923874_65924076_65925544_65925663_65926133_65926369_65928056_65928207_65932788_65932962_65937193_65937817_65954867
ENSMUST00000028382.13	chr2	+	1559	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_4	57.0169930810105	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTTTGGAAGGT	NA	False	NA	12	True	AATAAA	-21	NA	80469159	80489246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUST00000028384.5-1	chr2	+	4245	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	191	-2804	5	2104	multi-exon	FALSE	canonical	3	97	junction_1	4.10960933531265	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTAATTGCTTCATTG	NA	False	NA	NA	False	AATAAA	-15	NA	80447579	80464809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ENSMUST00000028386.12	chr2	-	4469	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	0	0	0	0	multi-exon	TRUE	canonical	3	653	junction_15	66.8594213422628	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTTAAAATCTTTG	NA	False	NA	0	True	AATAAA	-25	NA	80411608	80330855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ENSMUST00000028392.8	chr2	+	4042	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_19	21.5763108543292	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	False	NA	12	True	AATAAA	-18	NA	80145809	80184387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUST00000028398.14	chr2	+	2249	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGGTCCTAAGTATGGT	NA	False	NA	NA	False	AATAAA	-20	NA	78699390	78751637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUST00000028398.14-0	chr2	+	1676	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	0	573	0	423	multi-exon	FALSE	canonical	3	305	junction_4	9.66643677887566	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTGTAGAGTTTTTT	NA	False	NA	11	True	ATTAAA	-18	NA	78699390	78751064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUST00000028408.3	chr2	+	1576	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	1873	junction_8	150.054156890104	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTTGCATTTGAGTT	5118	False	NA	59	True	GATAAA	-16	NA	71219603	71271966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUST00000028426.9	chr2	+	7038	10	FSM	ENSMUSG00000027035.11	ENSMUST00000028426.9	7038	10	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_8	6.54896090146283	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCATGAGTGTCCTTTATT	NA	False	NA	5	True	AATAAA	-18	NA	68691784	68944626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785
ENSMUST00000028430.6	chr2	-	655	4	FSM	ENSMUSG00000056436.5	ENSMUST00000028430.6	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	45.146674542232	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	1	True	AATAAA	-30	NA	76190794	76184285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_76184581_76186423_76186617_76187916_76187946_76190656
ENSMUST00000028465.14	chr2	-	1812	12	FSM	ENSMUSG00000027071.15	ENSMUST00000028465.14	1812	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	6.62452243717697	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTAGGTGTCTACTCTT	NA	False	NA	NA	False	AATGAA	-1	NA	84865831	84828926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84829471_84829949_84830028_84830667_84830734_84831000_84831095_84852072_84852210_84852691_84852834_84853497_84853576_84853826_84853921_84854453_84854518_84854725_84854798_84855199_84855336_84865524
ENSMUST00000028469.14	chr2	+	2539	15	FSM	ENSMUSG00000027075.17	ENSMUST00000028469.14	2539	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	14.9196829314671	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTATCTGTGACTG	NA	False	NA	17	True	AATAAA	-19	NA	84669751	84693930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUST00000028470.10	chr2	+	690	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	17.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGTGTCTTTACTTGAGA	6417	False	NA	10	True	ATTAAA	-15	NA	84657340	84660557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84657492_84657942_84658058_84660133
ENSMUST00000028471.6	chr2	-	1761	8	FSM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	63.4909603078763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	NA	False	NA	-19	True	AATAAA	-19	NA	84652996	84641519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227_84646384_84647321_84647368_84647467_84647601_84648619_84649255_84652836
ENSMUST00000028475.9	chr2	-	1912	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	30.5	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTATGATTCTTTTTTT	NA	False	NA	-21	True	AATAAA	-17	NA	84557694	84553465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84554562_84555872_84556501_84557506
ENSMUST00000028487.10	chr2	-	1492	9	FSM	ENSMUSG00000027082.16	ENSMUST00000028487.10	1492	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	57.5972004527998	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATCATGTTGACTGTCC	NA	False	NA	-7	True	AATAAA	-14	NA	84304518	84263203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286
ENSMUST00000028494.9	chr2	+	2260	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	4.49691252107735	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69619979	69627567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ENSMUST00000028499.11	chr2	+	7054	30	FSM	ENSMUSG00000027087.12	ENSMUST00000028499.11	7054	30	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	22.0930902622631	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGGATTCTATCC	NA	False	NA	21	True	AATAAA	-21	NA	83554740	83637260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ENSMUST00000028509.11	chr2	+	2238	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_9	56.2121203045731	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCGTGTACTTCATGTGT	NA	False	NA	38	True	AATAAA	-38	NA	70491919	70522087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUST00000028511.8	chr2	+	2950	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	0	0	0	0	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATCGTAGAAAATAGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	74656146	74708775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ENSMUST00000028511.8-0	chr2	+	1228	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	27	1695	0	232	multi-exon	FALSE	canonical	3	767	junction_7	57.1160827926797	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTTTCATTTACTT	NA	False	NA	14	True	AATAAA	-12	NA	74656173	74707080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ENSMUST00000028517.13	chr2	-	2175	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCGTTTCTAAGGGGT	NA	False	NA	-13	True	ATTAAA	-14	NA	73044791	72923144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUST00000028517.13-0	chr2	-	1739	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	35	401	0	0	multi-exon	FALSE	canonical	3	336	junction_4	35.4120036145937	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTTGGTGTGTTTGGG	NA	False	NA	-5	True	AATAAA	-14	NA	73044756	72923545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUST00000028522.10	chr2	+	4310	26	FSM	ENSMUSG00000027111.17	ENSMUST00000028522.10	4310	26	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_25	140.364097973805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGATCTTT	NA	False	NA	NA	False	NA	NA	NA	71617321	71687102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71683877_71684008_71686197
ENSMUST00000028527.8	chr2	+	3369	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_13	41.1567126967157	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTGGTTTTCCTGTTTT	1376	False	NA	25	True	ATTAAA	-16	NA	109111082	109172092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ENSMUST00000028536.13	chr2	-	3337	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	43.6863823176056	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTTACTGTTTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	106804769	106792871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
ENSMUST00000028549.14	chr2	+	6105	25	FSM	ENSMUSG00000027130.16	ENSMUST00000028549.14	6105	25	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	16.1464112799787	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATAAGTTGTGCTGTAGT	NA	False	NA	NA	False	AATAAA	-20	NA	112097163	112193501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112097438_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ENSMUST00000028551.4	chr2	-	983	5	FSM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_3	24.5395089600424	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAAGTTCCCCTTCAGT	4997	False	NA	-5	True	AATAAA	-29	NA	112198372	112193355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163
ENSMUST00000028552.4	chr2	+	2886	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_7	47.4201082523719	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209555	112244585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUST00000028553.4	chr2	+	506	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	0	603	0	-603	multi-exon	FALSE	canonical	3	3938	junction_1	0	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATTTTGTGTGTTGTTG	NA	False	NA	24	True	ATTAAA	-18	NA	112092270	112093011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112092423_112092657
ENSMUST00000028554.4	chr2	+	2275	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	5.67252278910358	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAGGGTGGAATCATT	NA	False	NA	NA	False	NA	NA	NA	112069812	112077456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ENSMUST00000028580.12	chr2	+	2070	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATCACCATTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	109848161	109875661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
ENSMUST00000028580.12-1	chr2	+	1603	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	0	467	0	0	multi-exon	FALSE	canonical	3	423	junction_3	38.5455574612691	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTGCATTTATTTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	109848161	109875194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
ENSMUST00000028583.8	chr2	+	4228	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_4	22.349496638627	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTAATGTGGTTG	NA	False	NA	31	True	AGTAAA	-21	NA	109721197	109731348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ENSMUST00000028584.8	chr2	+	1191	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	9.72830920561225	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCTGGTCGTGGTTCTT	NA	False	NA	29	True	AATAAA	-25	NA	101716597	101731991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ENSMUST00000028592.12	chr2	-	1283	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	1722	junction_10	235.400531010446	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTAATCTAGCTAATT	2640	False	NA	-16	True	AGTAAA	-17	NA	104847425	104830000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUST00000028595.8	chr2	-	1801	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_7	14.7394029729837	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTACTCAGAATGGTGTG	NA	False	NA	-9	True	AATAAA	-24	NA	104573223	104552128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
ENSMUST00000028599.8	chr2	+	2817	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_7	45.0891062231222	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGTTTCTTTGTATG	6900	False	NA	19	True	AATAAA	-20	NA	104420867	104495774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ENSMUST00000028600.14	chr2	-	7454	16	FSM	ENSMUSG00000027177.15	ENSMUST00000028600.14	7454	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	6.77446184824546	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGCTGGCTTTTTTTC	NA	False	NA	-1	True	ATTAAA	-20	NA	104324791	104256825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ENSMUST00000028603.10-1	chr2	+	2877	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	125	1738	0	-1501	multi-exon	FALSE	canonical	3	178	junction_10	68.8773547691838	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTACTGCTTATTAA	NA	False	NA	15	True	ATTAAA	-28	NA	103858190	103891847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUST00000028607.13	chr2	-	6169	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCAGTGTTTAGAACAAAA	NA	False	NA	NA	False	AATAAA	-23	NA	103627994	103593285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ENSMUST00000028607.13-0	chr2	-	3445	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	0	2724	0	-647	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTGTATCTTGAAAC	NA	False	NA	NA	False	AATAAA	-11	NA	103627994	103596009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ENSMUST00000028607.13-1	chr2	-	4042	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	50	2077	0	0	multi-exon	FALSE	canonical	3	761	junction_18	276.654863648277	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627944	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ENSMUST00000028608.13	chr2	-	3879	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_25	29.5459474413003	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTGCAGTGCCTATAA	NA	False	NA	-9	True	AATAAA	-20	NA	103591615	103551600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ENSMUST00000028610.10	chr2	-	2613	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_10	47.7368364636321	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTGACTTTGGAGGTTC	NA	False	NA	NA	False	NA	NA	NA	103315505	103284193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ENSMUST00000028617.7	chr2	-	3736	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_1	163.356364354585	2977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATATTAGCATTTATT	NA	False	NA	44	True	NA	NA	NA	94268481	94242026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ENSMUST00000028619.5	chr2	-	1902	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_5	45.0653969249135	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	False	NA	NA	False	AATAAA	-31	NA	93988309	93863033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ENSMUST00000028623.13	chr2	-	2871	14	FSM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_9	31.3157237855525	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652913	93525975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ENSMUST00000028635.6	chr2	-	2073	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_9	116.017838666685	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTTGGTTCTTGATGTG	NA	False	NA	NA	False	AATAAA	-19	NA	125701059	125673521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUST00000028636.13	chr2	+	1827	10	FSM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	66	712	52	0	multi-exon	FALSE	canonical	3	11	junction_1	32.0916896284673	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTGCTCTTGAATG	NA	False	NA	8	True	ATTAAA	-15	NA	125701119	125825507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUST00000028639.13	chr2	-	2831	12	FSM	ENSMUSG00000027210.21	ENSMUST00000028639.13	2831	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.227216050694	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGTGTTTTTTAATG	NA	False	NA	4	True	AATAAA	-25	NA	115895528	115693544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_115694995_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ENSMUST00000028648.3	chr2	+	3761	6	FSM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.85472369909914	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGCTCTAACTAACTT	NA	False	NA	NA	False	NA	NA	NA	92745442	92786403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_92745715_92771097_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
ENSMUST00000028650.9	chr2	+	1392	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	17.2869893272368	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGGCTCTGTGTCATC	NA	False	NA	21	True	AATAAA	-21	NA	92205650	92211562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUST00000028661.6	chr2	+	2115	7	FSM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	42.3910367884533	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	1945	False	NA	NA	False	AATAAA	-15	NA	122016752	122036878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122016834_122016944_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
ENSMUST00000028663.5	chr2	-	2603	12	FSM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	5.08603662934522	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACTCTGTGTGTCCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	91854847	91812672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
ENSMUST00000028667.10	chr2	-	3584	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_9	28.4788615565222	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91794002	91763170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ENSMUST00000028668.8	chr2	+	5413	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	0	0	0	0	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGCTGTCTTTCTCTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	121859026	121887079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ENSMUST00000028668.8-0	chr2	+	1840	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	0	3573	0	-3573	multi-exon	FALSE	canonical	3	888	junction_1	160.980921673524	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTTATATCCCAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	121859026	121883506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ENSMUST00000028672.13	chr2	-	1054	5	FSM	ENSMUSG00000027239.15	ENSMUST00000028672.13	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	1100.19691419309	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762642	91760172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762274
ENSMUST00000028676.12	chr2	+	2789	13	FSM	ENSMUSG00000027242.15	ENSMUST00000028676.12	2789	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	8.00347146902865	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGATATTCACTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	121337203	121373885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121337345_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781
ENSMUST00000028678.9	chr2	-	3604	17	FSM	ENSMUSG00000027244.15	ENSMUST00000028678.9	3604	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	76.9829526583646	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCTATTCCAAATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	91540864	91504963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ENSMUST00000028683.14	chr2	+	2770	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	0	0	0	0	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATCTTGTCCATAATT	NA	False	NA	NA	False	ATTAAA	-26	NA	121244255	121269168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUST00000028683.14-0	chr2	+	1885	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	177	708	69	-708	multi-exon	FALSE	canonical	3	3731	junction_4	277.160252481404	4667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGTCGTTTTTTTCCCC	NA	False	NA	4	True	AATAAA	-13	NA	121244432	121268460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUST00000028694.12	chr2	+	1862	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	20.1345474247622	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGCGTCTTTTGATAGC	4750	False	NA	19	True	AATAAA	-16	NA	91087157	91095023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUST00000028696.5	chr2	-	1557	10	FSM	ENSMUSG00000002109.15	ENSMUST00000028696.5	1557	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_8	17.7888854188351	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGGGTTGGAGCAGGG	2997	False	NA	NA	False	NA	NA	NA	91067327	91042200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91064645_91065159_91065297_91067034
ENSMUST00000028728.6	chr2	-	7768	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_19	10.4276243563166	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTCATGTTTGGGCATT	NA	False	NA	NA	False	AATAAA	-37	NA	120801196	120690749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ENSMUST00000028730.13	chr2	-	2935	6	FSM	ENSMUSG00000027274.17	ENSMUST00000028730.13	2935	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	104.732802884292	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	0	True	AATAAA	-20	NA	136733302	136715699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136733198
ENSMUST00000028735.8	chr2	-	5612	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_14	16.9906327133512	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGTGGAGTCTTGTG	NA	False	NA	-1	True	AATAAA	-44	NA	136958564	136923375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ENSMUST00000028741.14	chr2	+	3084	5	FSM	ENSMUSG00000027285.14	ENSMUST00000028741.14	1430	5	0	-1654	0	0	multi-exon	FALSE	canonical	3	33	junction_2	111.162887242101	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439863	120452041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120440027_120442818_120442912_120446335_120446469_120448353_120448463_120449455
ENSMUST00000028743.10	chr2	+	2010	8	FSM	ENSMUSG00000027287.15	ENSMUST00000028743.10	2658	8	-20	668	0	-668	multi-exon	FALSE	canonical	3	42	junction_1	118.449334729914	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAAGCTGTATTAGCT	NA	False	NA	22	True	AATAAA	-27	NA	120398151	120431068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120398243_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ENSMUST00000028752.8	chr2	-	4339	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_15	25.6031410833385	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTTGAGCCTCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	120183606	120146941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ENSMUST00000028755.8	chr2	-	3730	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	18.4217263034711	435	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCACAGTTCCTAGAC	NA	False	NA	NA	False	AATAAA	-20	NA	119985087	119919655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ENSMUST00000028758.8	chr2	+	1818	7	FSM	ENSMUSG00000027296.8	ENSMUST00000028758.8	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	9.41039614232874	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCCTCCCCTTCA	NA	False	NA	23	True	AATAAA	-24	NA	119572817	119581744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119573343_119579670_119579768_119579842_119580060_119580153_119580359_119580574_119580677_119580957_119581030_119581144
ENSMUST00000028761.5	chr2	-	3731	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_5	36.0477461153953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGACATTTATTTCTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	130471958	130431921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ENSMUST00000028761.5-0	chr2	-	2390	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	11	1330	0	-1330	multi-exon	FALSE	canonical	3	59	junction_5	36.0477461153953	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGATTCCTCCTAGCA	NA	False	NA	NA	False	AATAAA	-17	NA	130471947	130433251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ENSMUST00000028763.10	chr2	+	3989	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_12	19.4854329889133	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119629994	119648585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ENSMUST00000028767.9	chr2	+	4664	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGTCCAAAGCTTGCA	NA	False	NA	NA	False	AATAAA	-25	NA	119505548	119565888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ENSMUST00000028767.9-0	chr2	+	2924	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	4	1736	0	-1736	multi-exon	FALSE	canonical	3	65	junction_14	16.8134482341515	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGACTGCTGTAGCTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	119505552	119564152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ENSMUST00000028768.2	chr2	-	1451	5	FSM	ENSMUSG00000027305.10	ENSMUST00000028768.2	1451	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	75.083287088406	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACCCTCAGCCTTTTTC	NA	False	NA	-6	True	AATAAA	-16	NA	119493279	119485931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
ENSMUST00000028769.14	chr2	+	2915	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	0	2410	0	-309	multi-exon	FALSE	canonical	3	182	junction_14	22.4438744427071	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGATTGTTCCTTG	NA	False	NA	28	True	AATGAA	-17	NA	130292197	130395634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUST00000028780.4	chr2	+	1637	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_2	33	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGTAGGGAAAGCCTC	7152	False	NA	81	True	GATAAA	-13	NA	119181709	119184862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119182118_119182837_119182874_119183669
ENSMUST00000028781.9	chr2	+	8745	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCGTTTCGTTCTGAATG	NA	False	NA	19	True	AATAAA	-22	NA	130748414	130872253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ENSMUST00000028781.9-0	chr2	+	5109	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	0	3636	0	-3636	multi-exon	FALSE	canonical	3	35	junction_19	8.33811937392825	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAAACTTGATTAATTT	NA	False	NA	16	True	TATAAA	-22	NA	130748414	130868617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ENSMUST00000028783.14	chr2	+	2273	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	0	0	0	0	multi-exon	TRUE	canonical	3	163	junction_1	46.3102580429002	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTTTGTTGAGCTC	NA	False	NA	13	True	AATAAA	-1	NA	119067842	119079995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ENSMUST00000028795.10	chr2	+	3368	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAAGTCCTATGCTCT	NA	False	NA	NA	False	AATAAA	-25	NA	118943287	118967771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUST00000028795.10-0	chr2	+	1794	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	10	1564	0	518	multi-exon	FALSE	canonical	3	651	junction_5	89.2808026867762	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGTTATTTGCTGGAG	NA	False	NA	20	True	AATAAA	-16	NA	118943297	118966207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUST00000028796.2	chr2	+	2706	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	2.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGATTCTGGTTCTCT	3255	False	NA	NA	False	CATAAA	-41	NA	118865270	118870250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118865950_118867398_118867696_118868520
ENSMUST00000028802.3	chr2	+	7800	23	FSM	ENSMUSG00000027326.14	ENSMUST00000028802.3	7800	23	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	10.3117721381002	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCGTGGTAGCGCATGCC	NA	False	NA	59	True	TATAAA	-16	NA	118887761	118935982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ENSMUST00000028804.15	chr2	+	3089	16	FSM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	16.6951756171922	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTGTTTGTTATGCA	NA	False	NA	NA	False	AATAAA	-16	NA	131028868	131040415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUST00000028806.12	chr2	+	2270	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	10.8269211792745	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTCAGTTCAAAGGCTC	NA	False	NA	31	True	AATAAA	-32	NA	131333683	131367103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
ENSMUST00000028807.6	chr2	+	2040	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	74	1551	0	343	multi-exon	FALSE	canonical	3	194	junction_8	15.0382432594562	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCCCAAAGCCGTGTTCT	NA	False	NA	51	True	ATTAAA	-23	NA	118692508	118711839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUST00000028815.15	chr2	-	6364	16	FSM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_8	16.3644601363918	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	7599	False	NA	-1	True	AATAAA	-17	NA	131987028	131894415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ENSMUST00000028816.9	chr2	-	1612	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4870	False	NA	-2	True	TATAAA	-20	NA	132089727	132081411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ENSMUST00000028816.9-0	chr2	-	1064	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	38	510	0	-508	multi-exon	FALSE	canonical	3	556	junction_2	26.7332502076846	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCCTCCACCTTCATA	4908	False	NA	NA	False	ATTAAA	-19	NA	132089689	132081921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ENSMUST00000028817.7	chr2	-	1518	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_1	234.222629137323	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTTGTGCAAAGTTTTC	8225	False	NA	-10	True	AATAAA	-27	NA	132095234	132091081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ENSMUST00000028829.13	chr2	+	6016	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCTCACTTCTTCA	NA	False	NA	16	True	ATTAAA	-21	NA	116951854	117012760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ENSMUST00000028829.13-0	chr2	+	4294	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	-278	2000	-278	-2000	multi-exon	FALSE	canonical	3	100	junction_4	10.1557318243881	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTGTTTTTTTTTTAA	NA	False	NA	NA	False	ATTAAA	-12	NA	116951576	117010760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ENSMUST00000028831.15	chr2	+	3179	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	21.8867032185704	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTTCAGGTCACAAAA	NA	False	NA	2	True	ATTAAA	-14	NA	132658060	132685815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ENSMUST00000028835.13	chr2	+	1924	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	1622	False	NA	13	True	AATAAA	-28	NA	132688585	132708705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ENSMUST00000028835.13-0	chr2	+	1297	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	0	627	0	271	multi-exon	FALSE	canonical	3	562	junction_2	81.1632442810305	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTGATTAATTTGTGA	1622	False	NA	20	True	AATAAA	-27	NA	132688585	132708078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ENSMUST00000028841.14	chr2	+	4145	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_9	42.2163738639668	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3576	False	NA	6	True	ATTAAA	-20	NA	126549262	126601217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUST00000028843.12	chr2	-	6985	39	FSM	ENSMUSG00000027365.15	ENSMUST00000028843.12	6985	39	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_11	63.1605262609672	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAGATGTTTAATGAGT	NA	False	NA	-22	True	ATTAAA	-29	NA	126718037	126633490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647005_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ENSMUST00000028844.11	chr2	-	2590	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	177	2849	177	1024	multi-exon	FALSE	canonical	3	8	junction_4	6.77630927178938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTTTTTCTGATCT	8456	False	NA	NA	False	ATTAAA	-18	NA	126774978	126735159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ENSMUST00000028848.4	chr2	-	1211	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	10.321366781822	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTTCCACTGTCTTT	NA	False	NA	-4	True	AATAAA	-19	NA	127286470	127278134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
ENSMUST00000028850.15	chr2	-	2728	9	FSM	ENSMUSG00000079056.13	ENSMUST00000028850.15	2728	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	31.0161248385416	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTCTCTCCAGCTTC	NA	False	NA	1	True	AATAAA	-18	NA	127363290	127298417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307895_127352748_127352915_127363157
ENSMUST00000028852.13	chr2	+	4481	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTCCAATAACTTGGC	3967	False	NA	7	True	AATAAA	-18	NA	127429141	127448749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUST00000028852.13-0	chr2	+	1440	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	197	2844	0	130	multi-exon	FALSE	canonical	3	1110	junction_4	149.07045314213	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGGTATATAGCTGT	4164	False	NA	26	True	AATAAA	-23	NA	127429338	127445905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUST00000028854.15	chr2	-	2778	4	FSM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	8.83176086632785	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTCACTCTTTTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	127498615	127475145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127476975_127480508_127480635_127482140_127482309_127497960
ENSMUST00000028856.3	chr2	-	2006	4	FSM	ENSMUSG00000027377.3	ENSMUST00000028856.3	2006	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	4.54606056566195	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAGTCTATCGCTTTG	NA	False	NA	2	True	AATAAA	-21	NA	127571852	127546305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127547844_127550756_127550880_127554188_127554357_127571675
ENSMUST00000028857.14	chr2	-	2260	20	FSM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_11	16.3928570350886	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATATCTAAATTTTTC	2834	False	NA	4	True	AATAAA	-20	NA	127630774	127582651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ENSMUST00000028858.8	chr2	-	3421	25	FSM	ENSMUSG00000027379.15	ENSMUST00000028858.9	3418	25	0	-3	0	3	multi-exon	TRUE	canonical	0	0	junction_18	145.15221297161	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673785	127643041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ENSMUST00000028866.9	chr2	-	1624	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	0	0	0	0	multi-exon	FALSE	canonical	2	159	junction_3	33.6115214621415	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTCATACTTGATT	NA	False	NA	1	True	AATAAA	-22	NA	128785997	128768187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ENSMUST00000028880.10	chr2	+	3316	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	146.125973050652	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGCTTTTTGTTT	NA	False	NA	22	True	AATAAA	-24	NA	129040683	129053536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ENSMUST00000028890.15	chr2	+	946	5	FSM	ENSMUSG00000027405.17	ENSMUST00000028890.15	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	920.852152899693	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAACCCCAATAAAAACA	NA	False	NA	-4	True	NA	NA	NA	130119076	130121198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUST00000028892.11	chr2	-	1616	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_6	49.1089192551946	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTGTGTTTTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	130126467	130121228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUST00000028897.8	chr2	-	2366	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_8	18.681383322448	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTTGAGTTCCTATTC	NA	False	NA	-3	True	ATTAAA	-19	NA	130239494	130232694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ENSMUST00000028900.11	chr2	+	3161	24	FSM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	83.6383654878219	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTAGGTTGTGTTCAGG	NA	False	NA	NA	False	NA	NA	NA	130266284	130286189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUST00000028909.5	chr2	-	2419	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	0	0	0	0	multi-exon	FALSE	canonical	3	1195	junction_10	117.133352305064	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112492	144092042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ENSMUST00000028910.9	chr2	+	2840	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTGTATTTATAGGG	NA	False	NA	NA	False	AATAAA	-20	NA	144112819	144123147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUST00000028910.9-0	chr2	+	1993	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	136	711	95	0	multi-exon	FALSE	canonical	3	360	junction_1	65.1517459474418	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112955	144122436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUST00000028911.15	chr2	+	3801	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	0	0	0	0	multi-exon	FALSE	canonical	1	121	junction_10	80.6347319707829	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210902	144249596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ENSMUST00000028914.9	chr2	+	4403	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	6.30352084156148	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTCTGGTATTAT	597	False	NA	8	True	GATAAA	-24	NA	144369637	144383915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ENSMUST00000028915.6	chr2	-	2170	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	20.0873094266007	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGACTGCTGTGGTGC	NA	False	NA	-9	True	AATAAA	-20	NA	144392789	144384184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
ENSMUST00000028916.15	chr2	+	2779	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	107.06740569791	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398175	144432669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUST00000028917.7	chr2	+	1350	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_5	10.373041983912	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTTTCTGTAGAAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	144441816	144610678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
ENSMUST00000028921.6	chr2	+	3434	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	0	0	0	0	multi-exon	TRUE	canonical	3	956	junction_9	74.1082057489866	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854915	146919920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUST00000028928.8	chr2	+	4232	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	11.7983049630021	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGCTTTGTAAAAG	371	False	NA	NA	False	AATAAA	-18	NA	148522942	148534869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ENSMUST00000028938.7	chr2	-	860	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	2071	junction_1	68	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	False	NA	-6	True	ATTAAA	-20	NA	148717496	148713641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_148713964_148714736_148714851_148717072
ENSMUST00000028944.4	chr2	-	3618	14	FSM	ENSMUSG00000027452.12	ENSMUST00000028944.4	3618	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_13	14.5093318267649	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	NA	False	NA	-5	True	AATAAA	-27	NA	150510178	150460024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150480283_150480460_150484631_150484832_150501755_150501853_150509804
ENSMUST00000028948.5	chr2	+	1087	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	28.3058690419888	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATCTCCTGGTAGCTT	2422	False	NA	23	True	AATAAA	-30	NA	150751513	150773200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ENSMUST00000028949.16	chr2	+	1364	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_3	133.71979799192	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACCAATTCTGTTATAT	NA	False	NA	19	True	AAGAAA	-1	NA	151336212	151353225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUST00000028963.14	chr2	+	3386	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	23.7366503835013	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTTTGTATCATCGC	NA	False	NA	28	True	AATAAA	-23	NA	152135747	152155916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
ENSMUST00000028964.14	chr2	-	2252	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_12	150.053231295505	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174573	152158253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
ENSMUST00000028964.14-0	chr2	-	1752	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	0	500	0	-500	multi-exon	FALSE	canonical	3	72	junction_12	150.053231295505	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGACGATGGTGGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	152174573	152158753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
ENSMUST00000028969.9	chr2	+	3654	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	172.681016802699	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTCTTGTTGTCCTAG	2725	False	NA	NA	False	NA	NA	NA	152689914	152736574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000028972.9	chr2	-	1273	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	13.6656503687164	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	8639	False	NA	NA	False	AATAAA	-21	NA	152857347	152850809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ENSMUST00000028977.7	chr2	+	5635	9	FSM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.17052946998661	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCTTGTCAGTGAT	7813	False	NA	10	True	AATAAA	-29	NA	153133332	153175310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
ENSMUST00000028981.9	chr2	+	7336	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAATGGCTGTGTTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	153583193	153615230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ENSMUST00000028981.9-0	chr2	+	2588	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	0	4748	0	-4748	multi-exon	FALSE	canonical	3	1002	junction_3	91.867204884732	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583193	153610482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ENSMUST00000028990.10	chr2	-	1970	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	9.02265393460642	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTCCTTGTCTACTT	5680	False	NA	-15	True	AATAAA	-12	NA	154214639	154177305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
ENSMUST00000028991.7	chr2	-	2125	8	FSM	ENSMUSG00000027488.13	ENSMUST00000028991.7	2125	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	43.0704216892498	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTGTGGTTTGTGTC	NA	False	NA	1	True	AATAAA	-30	NA	154250001	154218232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154218829_154218926_154219115_154219927_154220137_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
ENSMUST00000028995.5	chr2	+	3617	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	7.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTCTGCCGTCTGGTAA	NA	False	NA	NA	False	AATAAA	-17	NA	172187484	172197669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172187768_172193374_172193545_172194505
ENSMUST00000028997.8	chr2	-	1905	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	-8	True	AATATA	-16	NA	172212426	172198115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
ENSMUST00000028999.12	chr3	+	3617	3	FSM	ENSMUSG00000027499.13	ENSMUST00000028999.12	3617	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCTCTCAAGAGTCAT	2674	False	NA	21	True	ATTAAA	-22	NA	7431729	7510426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_7431813_7502397_7502576_7507070
ENSMUST00000029002.9	chr3	+	2073	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGGTTTGGTCTGGTCTC	NA	False	NA	23	True	AATAAA	-23	NA	8574419	8626666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ENSMUST00000029002.9-1	chr3	+	812	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	155	1106	0	-1075	multi-exon	FALSE	canonical	3	1699	junction_2	84.762535946018	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTTTGCTTGATGTTT	NA	False	NA	20	True	NA	NA	NA	8574574	8625560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ENSMUST00000029005.4	chr2	+	2173	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGGTTGGTTTTGCTT	NA	False	NA	16	True	AATAAA	-16	NA	172282475	172311828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ENSMUST00000029005.4-0	chr2	+	1089	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	46	1038	0	-1038	multi-exon	FALSE	canonical	3	407	junction_4	19.7416912902618	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGCGTGGTCACTTGCT	NA	False	NA	9	True	TATAAA	-20	NA	172282521	172310790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ENSMUST00000029013.10	chr2	+	1742	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_10	106.078950794457	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTCCAAGTTTCTC	NA	False	NA	85	True	NA	NA	NA	172841909	172857532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUST00000029014.16	chr2	+	1768	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	63.0766729200793	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAAGGTGGTTTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	172863694	172876518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
ENSMUST00000029024.10	chr2	+	7155	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGGCATTCATTACG	NA	False	NA	27	True	AATAAA	-40	NA	173501552	173549136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ENSMUST00000029024.10-0	chr2	+	1902	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	96	5157	0	1032	multi-exon	FALSE	canonical	3	160	junction_6	19.3512847692917	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTAGTCCTTCCTGC	NA	False	NA	8	True	AATAAA	-21	NA	173501648	173543979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ENSMUST00000029047.12	chr3	-	2288	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	14.2771402841703	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGAGTTTCTTTAGT	NA	False	NA	1	True	ATTAAA	-20	NA	10505147	10483205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ENSMUST00000029049.7	chr3	+	6188	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTATCCTATTTCTTT	NA	False	NA	1	True	ATTAAA	-16	NA	10431966	10460397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ENSMUST00000029049.7-1	chr3	+	1198	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	51	4939	0	-4939	multi-exon	FALSE	canonical	3	174	junction_1	13.9709520076479	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTCTAGTGAGTCTAT	NA	False	NA	8	True	AATAAA	-17	NA	10432017	10455458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ENSMUST00000029053.8	chr2	+	4213	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGTGATGTGCTTGCCT	1060	False	NA	10	True	AATAAA	-16	NA	167774246	167821305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUST00000029053.8-0	chr2	+	1693	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	45	2475	0	2173	multi-exon	FALSE	canonical	3	103	junction_4	11.7997616501351	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	1105	False	NA	NA	False	NA	NA	NA	167774291	167818830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUST00000029060.11	chr2	-	3529	28	FSM	ENSMUSG00000027546.16	ENSMUST00000029060.11	3529	28	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_27	35.3190436202576	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6623	False	NA	-23	True	GATAAA	-16	NA	168583720	168476357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ENSMUST00000029061.12	chr2	-	5073	4	FSM	ENSMUSG00000027547.18	ENSMUST00000029061.12	5073	4	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_3	46.1808040928985	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168609121	168590251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168592381_168594373_168594661_168596353_168598721_168608831
ENSMUST00000029069.13	chr3	+	1779	8	FSM	ENSMUSG00000027552.15	ENSMUST00000029069.13	1779	8	0	0	0	0	multi-exon	FALSE	canonical	2	153	junction_3	25.3191868844518	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATCTTTGGGGGAATGTG	1922	False	NA	30	True	AATAAA	-23	NA	14643700	14671369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666062_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUST00000029071.9	chr3	+	2299	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCTTTTGGAAGAT	2179	False	NA	NA	False	AATAAA	-15	NA	14706786	14728062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ENSMUST00000029071.9-1	chr3	+	1689	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	0	610	0	-610	multi-exon	FALSE	canonical	3	101	junction_4	16.344384016808	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGCCTAAGCCATTCAT	2179	False	NA	NA	False	ATTAAA	-21	NA	14706786	14727452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ENSMUST00000029078.9	chr3	+	1788	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	9.4339811320566	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGGTGCCTGATTGTCT	NA	False	NA	11	True	AATAAA	-14	NA	14951487	14965830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ENSMUST00000029082.9	chr2	-	914	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	3926	junction_1	568.041078326794	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	-12	True	AATAAA	-17	NA	179684226	179678166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUST00000029085.9	chr2	+	1510	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	10.4253297309965	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-3	NA	180224504	180228080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
ENSMUST00000029087.4	chr2	+	2449	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	11.4370256428652	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGCCGTGTTCTGTTTG	NA	False	NA	22	True	AATAAA	-22	NA	180231037	180237629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
ENSMUST00000029090.9	chr2	+	1655	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	7.56224173112709	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGCTTCTAAAAAGTTCT	NA	False	NA	18	True	AATAAA	-29	NA	180351909	180360526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUST00000029092.13	chr2	+	2714	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	25.5745805752046	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTGCTTGCTTCAC	4034	False	NA	25	True	NA	NA	NA	180609026	180624319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ENSMUST00000029106.13	chr2	-	5309	5	FSM	ENSMUSG00000027583.14	ENSMUST00000029106.13	5309	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	10.688779163216	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGCCTCCTGTGTGGTTT	8538	False	NA	NA	False	AATAAA	-23	NA	181101219	181029554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181033262_181037242_181037419_181053488_181053774_181065211_181066182_181101048
ENSMUST00000029116.14	chr2	+	3569	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.3431330181157	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTGTGTTGAGTATG	NA	False	NA	26	True	AATAAA	-29	NA	181479646	181499254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
ENSMUST00000029120.14	chr2	+	1802	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	48.6369772452561	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGAGGTGGAATGG	NA	False	NA	6	True	AATAAA	-16	NA	154633052	154709164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUST00000029125.10	chr3	-	2927	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	0	746	0	-746	multi-exon	TRUE	canonical	3	251	junction_6	16.1761140780679	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTTATTGTATTTT	NA	False	NA	-10	True	AATAAA	-16	NA	19217229	19186311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ENSMUST00000029126.15	chr2	+	5159	25	FSM	ENSMUSG00000027598.17	ENSMUST00000029126.15	5159	25	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_8	21.5151351765836	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCCTTTTCGTCTGCT	NA	False	NA	57	True	AATAAA	-17	NA	154975428	155068775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUST00000029128.4	chr2	+	1112	4	FSM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	22.4251842554055	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCCAGCTGCTTGT	NA	False	NA	11	True	AATAAA	-23	NA	155118216	155119993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155118567_155118877_155118934_155119017_155119125_155119394
ENSMUST00000029131.11	chr2	-	2614	15	FSM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	5.44593089061054	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTTGATTTCTGTTT	707	False	NA	NA	False	ATTAAA	-24	NA	155356768	155332298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245_155348482_155356548
ENSMUST00000029135.15	chr2	+	2931	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_8	8.02030295659528	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTTTTAGGTATCTG	2007	False	NA	19	True	AATAAA	-23	NA	155359867	155404666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
ENSMUST00000029142.15	chr2	-	1500	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	0	0	0	0	multi-exon	TRUE	canonical	3	1052	junction_5	244.745255316625	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGCTGTGTGTGTGTGT	NA	False	NA	-3	True	ATTAAA	-22	NA	155668845	155661751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ENSMUST00000029147.16	chr2	-	2051	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_1	23.0952135493242	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTGAATTTTTGAGC	3106	False	NA	-2	True	AATAAA	-17	NA	155986106	155965558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ENSMUST00000029149.13	chr2	-	2711	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_5	453.136943808105	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022087	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUST00000029158.4	chr2	+	2611	4	FSM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	0	816	0	0	multi-exon	FALSE	canonical	3	133	junction_3	2.16024689946929	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCCTGTGTGAGTCTC	NA	False	NA	7	True	ATTAAA	-18	NA	156389515	156410076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156389804_156392568_156393370_156397746_156397977_156408784
ENSMUST00000029165.4	chr2	+	1045	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	0	0	0	0	multi-exon	FALSE	canonical	3	1149	junction_1	99.8031395631754	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGCATGCCTGGTA	4642	False	NA	14	True	AATAAA	-18	NA	156705047	156715483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
ENSMUST00000029170.8	chr2	-	4862	22	FSM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	43.0171615808876	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGTACTTTTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	157046432	156987812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ENSMUST00000029178.7	chr2	+	2442	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTCTCTAGTCTTGC	NA	False	NA	NA	False	GGGGCT	-25	NA	157579320	157733534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUST00000029178.7-0	chr2	+	1866	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	62	514	62	-514	multi-exon	FALSE	canonical	3	501	junction_9	43.3601968015214	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTGTATGTGTAAGCT	NA	False	NA	23	True	ATTAAA	-23	NA	157579382	157733020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUST00000029179.11	chr2	-	3830	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	12.5746749055231	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870353	157823722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ENSMUST00000029180.14	chr2	+	3609	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	-213	887	0	-887	multi-exon	FALSE	canonical	3	131	junction_3	20.3749573960018	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870427	157919240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
ENSMUST00000029183.3	chr2	+	2266	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	16.3571255285137	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	406	False	NA	8	True	AATAAA	-16	NA	158610012	158628557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
ENSMUST00000029194.12	chr3	+	6717	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.5668805126817	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTCAAGTCATCTTG	NA	False	NA	18	True	AATAAA	-20	NA	31149209	31176726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ENSMUST00000029199.11	chr3	-	7797	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCGGTTCTGAGTCGGG	NA	False	NA	0	True	AATAAA	-26	NA	32419827	32388940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
ENSMUST00000029199.11-0	chr3	-	2361	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	0	5436	0	-5432	multi-exon	FALSE	canonical	3	71	junction_5	21.7568380055559	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGACTGATGGAGTGT	NA	False	NA	-29	True	AATAAA	-18	NA	32419827	32394376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
ENSMUST00000029203.13	chr3	+	1458	4	FSM	ENSMUSG00000027667.14	ENSMUST00000029203.13	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	8.60232526704263	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGATCTTTACGTAATGT	7942	False	NA	-36	True	NA	NA	NA	32569443	32574834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32569502_32571177_32571289_32573258_32573394_32573680
ENSMUST00000029214.14	chr3	+	2010	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_9	101.670310666418	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	23	True	AATAAA	-20	NA	32762655	32781122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUST00000029252.8	chr3	-	1891	11	FSM	ENSMUSG00000027702.8	ENSMUST00000029252.8	1891	11	0	0	0	0	multi-exon	TRUE	canonical	3	297	junction_6	40.0710618776194	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTCTTGAGTTTAGAT	NA	False	NA	-18	True	AATAAA	-19	NA	30702018	30678415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_30679052_30684121_30684249_30685430_30685587_30685941_30686097_30688693_30688790_30690390_30690520_30696887_30696972_30697432_30697498_30697596_30697719_30699343_30699465_30701818
ENSMUST00000029256.9	chr3	+	3967	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGCAGTAGTGATGGATT	NA	False	NA	NA	False	AATAAA	-21	NA	30847023	30875412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUST00000029256.9-0	chr3	+	2275	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	461	1231	0	0	multi-exon	FALSE	canonical	3	556	junction_4	88.1522338147515	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGACAATTTGCTGTTC	NA	False	NA	-51	True	GGGGCT	-28	NA	30847484	30874181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUST00000029257.15	chr3	+	4868	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	0	0	0	0	multi-exon	FALSE	canonical	2	274	junction_18	53.5097310762941	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808282	35910425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ENSMUST00000029259.10	chr3	-	2455	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	26.6884748788316	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGCTGTAGTTTTTTT	NA	False	NA	NA	False	TATAAA	-28	NA	36054827	36013981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ENSMUST00000029266.14	chr3	-	1731	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	8.69985632065266	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTAGGTTTGTGTTT	NA	False	NA	3	True	AATAAA	-21	NA	36530043	36503071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
ENSMUST00000029269.12	chr3	+	1617	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_11	43.5980892749872	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGAGAGCCGAATGAGT	NA	False	NA	15	True	AATAAA	-23	NA	36606754	36619876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ENSMUST00000029270.10	chr3	-	2965	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_1	54.4767315990441	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGGTGGGCTGTGTG	NA	False	NA	-7	True	AATAAA	-21	NA	36626299	36619013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ENSMUST00000029277.13	chr3	+	2890	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	86.3305276249369	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474446	37633245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ENSMUST00000029297.6	chr3	-	2241	12	FSM	ENSMUSG00000027737.11	ENSMUST00000029297.6	9223	12	6	6976	0	-2065	multi-exon	FALSE	canonical	2	3	junction_8	2.75740925238238	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCTATACTGTGAAAGT	8837	False	NA	NA	False	TATAAA	-20	NA	50398054	50326362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_50326816_50332012_50332191_50333483_50333634_50335420_50335518_50336323_50336428_50338492_50338617_50372436_50372482_50378490_50378591_50382099_50382226_50389797_50389914_50393237_50393365_50397433
ENSMUST00000029303.13	chr3	+	6090	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTCACTTTTCCCTT	NA	False	NA	3	True	AATAAA	-20	NA	51323436	51383406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ENSMUST00000029303.13-0	chr3	+	4136	20	FSM	ENSMUSG00000063273.12	ENSMUST00000029303.13	6090	20	0	1954	0	1813	multi-exon	FALSE	canonical	3	462	junction_18	45.4091281535727	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51323436	51381452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ENSMUST00000029316.16	chr3	-	1300	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGTCCTTACGTTGTT	NA	False	NA	-12	True	AATAAA	-27	NA	54642814	54636098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUST00000029316.16-0	chr3	-	949	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	347	4	0	0	multi-exon	FALSE	canonical	3	1645	junction_10	187.140588863026	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642467	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUST00000029336.6	chr3	-	5620	25	FSM	ENSMUSG00000027770.6	ENSMUST00000029336.6	5620	25	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_17	54.5870704827516	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCATGTTTTAAC	NA	False	NA	0	True	NA	NA	NA	62414425	62375433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ENSMUST00000029344.10	chr3	+	3011	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	0	0	0	0	multi-exon	TRUE	canonical	3	661	junction_4	69.2886394407882	904	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGGATAAATGACTGC	NA	False	NA	19	True	AATAAA	-20	NA	67490073	67511570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUST00000029347.14	chr3	-	3880	19	FSM	ENSMUSG00000027778.16	ENSMUST00000029347.14	3880	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	8.92285178351727	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAATAAAAAGGTTAAAAAA	1015	False	NA	NA	False	AAGAAA	-35	NA	68901870	68799857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898297_68901833
ENSMUST00000029353.9	chr3	-	8819	17	FSM	ENSMUSG00000027782.11	ENSMUST00000029353.9	8819	17	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATGACTACCTAAAAGT	NA	False	NA	-4	True	NA	NA	NA	69034446	68974481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ENSMUST00000029355.9	chr3	+	3785	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	0	5632	0	2071	multi-exon	FALSE	canonical	3	48	junction_1	7.40870359029762	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGTTTGGGTGAAGAA	1774	False	NA	1	True	AATAAA	-13	NA	69224193	69462503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ENSMUST00000029358.15	chr3	+	1706	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	98	7331	0	0	multi-exon	FALSE	canonical	3	839	junction_3	66.7311687960648	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTTGTGAAGGTTT	NA	False	NA	11	True	AATAAA	-21	NA	69629415	69656375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ENSMUST00000029369.5	chr3	+	2364	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_8	29.6317397396778	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGCAAGGAATCTGAT	NA	False	NA	20	True	AATAAA	-22	NA	55089448	55117378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ENSMUST00000029380.14	chr3	-	4697	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_3	19.06494747494	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCCTTTGTTTCTGTC	NA	False	NA	-6	True	AATAAA	-17	NA	57483249	57363069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ENSMUST00000029382.13	chr3	+	1752	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	0	0	0	0	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGATGTCCTTTCCTG	NA	False	NA	29	True	AATAAA	-19	NA	79498671	79510957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUST00000029382.13-0	chr3	+	1325	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	53	374	53	0	multi-exon	FALSE	canonical	3	2177	junction_5	219.851352699843	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATCTCATTTTAAAAT	NA	False	NA	16	True	AATAAA	-15	NA	79498724	79510583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUST00000029385.9-1	chr3	-	2450	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	0	2161	0	-2161	multi-exon	FALSE	canonical	3	847	junction_1	36.5	619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAATGATTTTGCAG	NA	False	NA	9	True	AATAAA	-27	NA	58433313	58429398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_58431290_58432503_58432580_58432830
ENSMUST00000029386.14	chr3	-	2377	13	FSM	ENSMUSG00000027809.15	ENSMUST00000029386.14	2377	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	10.8790701195767	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACCTTTCAAGTCCTTC	3584	False	NA	0	True	AATAAA	-30	NA	79536170	79511094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
ENSMUST00000029387.15	chr3	+	2299	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	0	0	0	0	multi-exon	TRUE	canonical	3	611	junction_6	73.3195163601748	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433241	58464922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUST00000029388.10	chr3	+	1970	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCGTTTCTTTAGACTCA	4369	False	NA	NA	False	AATAAA	-14	NA	79536385	79540127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_79536664_79538435
ENSMUST00000029400.7	chr3	+	3782	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTACAGTCCTTATTTT	NA	False	NA	11	True	TATAAA	-15	NA	63203515	63289044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ENSMUST00000029400.7-0	chr3	+	5756	23	FSM	ENSMUSG00000027820.13	ENSMUST00000029400.7	3782	23	116	-2090	116	2090	multi-exon	FALSE	canonical	3	117	junction_1	72.8286793023574	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63203631	63291134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_63203744_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
ENSMUST00000029402.15	chr3	-	3150	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	11.3666177907063	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAAGCTGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	63872189	63849750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
ENSMUST00000029405.8	chr3	+	8105	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCATCTTGTGGTTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	63883526	63930000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ENSMUST00000029405.8-0	chr3	+	2276	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	0	5829	0	-5829	multi-exon	FALSE	canonical	3	954	junction_10	99.4709114375767	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTGTAACTGAGGC	NA	False	NA	13	True	AATAAA	-13	NA	63883526	63924171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ENSMUST00000029414.12	chr3	-	2957	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_4	56.4225132371822	1127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTTCTGTAATTCT	2716	False	NA	-1	True	ATTAAA	-20	NA	65300044	65287075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ENSMUST00000029416.14	chr3	-	2169	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	39.2388837761728	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865670	65853571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ENSMUST00000029423.9	chr3	+	2947	9	FSM	ENSMUSG00000027834.16	ENSMUST00000029423.9	4091	9	0	1144	0	-1144	multi-exon	FALSE	canonical	3	8	junction_2	2.1650635094611	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTATGTGATGTCCCA	NA	False	NA	6	True	AATAAA	-17	NA	75464853	75549658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_75464950_75520386_75520655_75521760_75521992_75523874_75524070_75526425_75526631_75531165_75531264_75545224_75545312_75547555_75547646_75547981
ENSMUST00000029424.12	chr3	-	907	8	FSM	ENSMUSG00000027835.12	ENSMUST00000029424.12	907	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	493.920757091372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAAAGTTTGACTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	75464118	75424767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440898_75448466_75448686_75464028
ENSMUST00000029435.15	chr3	-	4345	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTATACTGTTTCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	103716760	103707920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ENSMUST00000029435.15-0	chr3	-	2133	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	66	2146	0	134	multi-exon	FALSE	canonical	3	65	junction_3	4.71404520791032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAATTTGTTCCACTTG	NA	False	NA	NA	False	NA	NA	NA	103716694	103710066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ENSMUST00000029438.15	chr3	-	4185	16	FSM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	0	0	0	0	multi-exon	FALSE	canonical	2	63	junction_1	12.16260206078	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGTTCTGAAGTTACCCT	NA	False	NA	NA	False	AAGAAA	-1	NA	103698572	103650975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ENSMUST00000029438.15-0	chr3	-	7706	16	FSM	ENSMUSG00000008730.18	ENSMUST00000029438.15	4185	16	-19	-3502	0	-343	multi-exon	FALSE	canonical	2	63	junction_1	12.16260206078	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCCTGTGTGTGGTTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	103698591	103647473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698310
ENSMUST00000029444.13	chr3	+	8875	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_7	11.658340255239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTCTTTTTGAGACC	NA	False	NA	NA	False	ATTAAA	-32	NA	103186608	103266091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ENSMUST00000029444.13-0	chr3	+	5183	20	FSM	ENSMUSG00000033014.13	ENSMUST00000029444.13	8875	20	480	3212	-106	0	multi-exon	FALSE	canonical	3	95	junction_7	11.658340255239	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGGGTTGTTTTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	103187088	103262879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103260882_103260934_103261012
ENSMUST00000029445.13	chr3	+	4470	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_4	34.7870505919787	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCTACTGCCATAGGG	NA	False	NA	26	True	AATAAA	-28	NA	102965600	102975230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ENSMUST00000029446.13	chr3	+	4318	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	4594.89725408776	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927741	102965502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUST00000029447.12	chr3	+	2375	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	22	4978	0	1287	multi-exon	FALSE	canonical	3	364	junction_4	22.0609949911603	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCTCATTTTACTGAG	NA	False	NA	18	True	AATAAA	-15	NA	102903045	102910797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUST00000029448.11	chr3	-	3437	33	FSM	ENSMUSG00000027855.14	ENSMUST00000029448.11	3437	33	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_28	23.7190382064176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843416	102725814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
ENSMUST00000029451.12	chr3	+	4484	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAGAGGAACTACTGAA	NA	False	NA	NA	False	ATTAAA	-31	NA	102641844	102679608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ENSMUST00000029451.12-0	chr3	+	2994	8	FSM	ENSMUSG00000027858.14	ENSMUST00000029451.12	4484	8	428	1062	0	-1062	multi-exon	FALSE	canonical	3	42	junction_1	8.2065180664829	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCTTGAGTTATCTTAA	NA	False	NA	4	True	ATTAAA	-16	NA	102642272	102678546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_102642382_102657073_102657177_102664608_102664707_102665472_102665548_102666625_102666725_102668212_102668285_102672500_102672585_102676192
ENSMUST00000029453.13	chr3	-	3326	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	71	3134	71	0	multi-exon	FALSE	canonical	3	72	junction_4	79.9721890434929	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102111938	102064032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ENSMUST00000029459.10	chr3	+	3008	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_11	11.7054581917706	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTATAAGGTGTTCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	100069696	100114297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ENSMUST00000029462.10	chr3	+	3566	8	FSM	ENSMUSG00000027868.12	ENSMUST00000029462.10	3566	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.73073281634303	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTGTTTGTTCATA	NA	False	NA	NA	False	AATAAA	-15	NA	99161075	99261575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_99161402_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
ENSMUST00000029476.9	chr3	+	2810	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	8.07774721070176	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGTGTGAAGTTCTGT	NA	False	NA	18	True	AATAAA	-17	NA	97808505	97830592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
ENSMUST00000029477.11	chr3	+	3431	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.55902608401044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTTTTCTAATTGTC	4475	False	NA	NA	False	ATTAAA	-22	NA	109030464	109075773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
ENSMUST00000029480.9	chr3	-	3026	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	114.013332553697	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6850	False	NA	-9	True	AATAAA	-18	NA	108819043	108810122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ENSMUST00000029482.16	chr3	-	3498	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTTAATCAAGTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	108629625	108585953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ENSMUST00000029482.16-0	chr3	-	3045	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	0	453	0	-453	multi-exon	FALSE	canonical	3	65	junction_14	18.8820182248852	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTTATCTGTCTCCT	NA	False	NA	-3	True	AATAAA	-15	NA	108629625	108586406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ENSMUST00000029489.15	chr3	-	1707	8	FSM	ENSMUSG00000027890.18	ENSMUST00000029489.15	1707	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	25.3175747621437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGATGTCTTTTCCTAC	NA	False	NA	-4	True	AATAAA	-20	NA	107952210	107947723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107951952
ENSMUST00000029490.15	chr3	-	3863	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_5	41.8762593094226	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTAGTCGTGTGTCTTT	NA	False	NA	-4	True	ATTAAA	-23	NA	107603876	107570435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ENSMUST00000029515.5	chr3	+	511	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	9.5	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAGAGTCAGTAGATT	NA	False	NA	7	True	AATAAA	-25	NA	93427794	93433594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_93427861_93431357_93431507_93433298
ENSMUST00000029540.13	chr3	-	4066	22	FSM	ENSMUSG00000027931.13	ENSMUST00000029540.13	4066	22	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_16	35.8067374802507	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90373173	90357897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90358490_90358612_90358705_90362124_90362224_90362398_90362574_90363007_90363077_90363202_90363327_90363469_90363617_90364215_90364385_90364627_90364784_90365378_90365536_90365628_90365701_90365938_90366044_90366351_90366430_90366629_90366705_90367239_90367361_90368396_90368482_90368671_90368808_90369472_90369565_90369874_90370011_90370441_90370556_90371117_90371318_90372101
ENSMUST00000029541.12	chr3	-	2259	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	21.4101625806157	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	False	NA	-17	True	AATAAA	-14	NA	90297234	90292545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
ENSMUST00000029541.12-0	chr3	-	1579	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	680	0	-266	0	multi-exon	FALSE	canonical	3	73	junction_6	21.4101625806157	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCCATCTTCGAGAGT	NA	False	NA	-17	True	AATAAA	-14	NA	90296554	90292545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
ENSMUST00000029542.12	chr3	-	4337	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_21	22.3924035870797	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCCTGAGTTGACAT	NA	False	NA	-11	True	AATGAA	-16	NA	90340836	90298702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ENSMUST00000029545.15	chr3	+	2747	14	FSM	ENSMUSG00000027936.19	ENSMUST00000029545.15	2747	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	29.1612533719806	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161469	90171432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90161866_90164423_90164526_90164601_90164719_90165771_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ENSMUST00000029546.15	chr3	+	1101	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	18.2260116317312	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138903	90143145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
ENSMUST00000029549.16	chr3	+	2230	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	0	0	0	0	multi-exon	FALSE	canonical	3	3249	junction_3	140.088164659085	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGGCTTGACTTTGTTA	NA	False	NA	18	True	AATAAA	-21	NA	89986846	90008208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUST00000029553.16	chr3	-	3509	29	FSM	ENSMUSG00000042520.17	ENSMUST00000029553.16	3509	29	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	263.472271321105	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3557	False	NA	-9	True	AATAAA	-21	NA	89959772	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000029564.12	chr3	+	1194	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	43.1878165690279	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGGAGACTGATGATT	140	False	NA	21	True	AATAAA	-20	NA	89366424	89376320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ENSMUST00000029565.11	chr3	-	1022	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	11.5481600266016	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177877	89175552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
ENSMUST00000029566.9	chr3	-	1480	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.77263412660235	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTGCCCCACCATG	1666	False	NA	NA	False	AATAAA	-21	NA	89186952	89179039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
ENSMUST00000029568.7	chr3	-	2898	12	FSM	ENSMUSG00000027956.12	ENSMUST00000029568.7	2898	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	7.83085653358474	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTTCTTTAGATA	NA	False	NA	NA	False	AATAAA	-17	NA	79749986	79719870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79749694
ENSMUST00000029569.9	chr3	-	5725	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	23.3779941878019	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCAGTAGTTCCTCAGG	1796	False	NA	-9	True	AATAAA	-20	NA	116506299	116463118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ENSMUST00000029570.9	chr3	-	2782	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_3	57.2050104723397	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	-1	True	AATAAA	-36	NA	116456326	116424812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ENSMUST00000029575.12	chr3	+	3000	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	7.08872343937891	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGGTGCTCTGGTGACGTG	19	False	NA	23	True	AATAAA	-34	NA	115801110	115822666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ENSMUST00000029588.10	chr3	-	2121	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_6	145.639680948108	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	-1	True	AATAAA	-17	NA	127346998	127330362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ENSMUST00000029610.9	chr3	-	1789	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCTGTCTTCTCTGA	NA	False	NA	NA	False	AATAAA	-43	NA	131065750	131027067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ENSMUST00000029610.9-0	chr3	-	1712	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	77	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	33.5492327841959	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCTGTCTTCTCTGA	NA	False	NA	NA	False	AATAAA	-43	NA	131065673	131027067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ENSMUST00000029623.11	chr3	-	3014	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	5.5	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGGTTTCTCTGTTTTTC	NA	False	NA	-1	True	TATAAA	-16	NA	83749074	83743578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_83746097_83748195_83748444_83748826
ENSMUST00000029625.8	chr3	+	2003	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTCTGTCATGTCT	NA	False	NA	21	True	TATAAA	-24	NA	83673627	83681623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_83674351_83676632_83676714_83680424
ENSMUST00000029626.9	chr3	+	1456	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	8.11206234909197	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGGCACTCTGAGGAT	NA	False	NA	NA	False	AATAAA	-14	NA	129695073	129707752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ENSMUST00000029628.11	chr3	+	1749	15	FSM	ENSMUSG00000027998.12	ENSMUST00000029628.11	1749	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	194.977719815598	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGTGTTTTATTTCTG	NA	False	NA	24	True	AATAAA	-16	NA	82962838	82979596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977929_82978044_82978496_82978691_82979417
ENSMUST00000029629.15	chr3	+	1561	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGTGTTTTCAAGTCT	NA	False	NA	25	True	AATAAA	-25	NA	129672254	129689474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
ENSMUST00000029629.15-0	chr3	+	1029	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	0	532	0	336	multi-exon	FALSE	canonical	3	341	junction_1	3.68178700572909	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGTAAGGACTTTTCA	NA	False	NA	13	True	AATAAA	-20	NA	129672254	129688942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
ENSMUST00000029639.12	chr3	-	2021	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	4.05431868505671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGGTTTAAGTTATTA	NA	False	NA	NA	False	AATAAA	-32	NA	117662585	117575295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
ENSMUST00000029639.12-0	chr3	-	1797	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	0	224	0	0	multi-exon	FALSE	canonical	3	21	junction_1	4.05431868505671	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGATGTGTTCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	117662585	117575519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
ENSMUST00000029643.15	chr3	-	1271	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	-1	True	AATAAA	-22	NA	129625045	129618560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ENSMUST00000029643.15-0	chr3	-	1003	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	261	7	-203	0	multi-exon	FALSE	canonical	3	868	junction_6	342.204130113397	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624784	129618567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ENSMUST00000029644.16	chr3	+	1226	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	0	0	0	0	multi-exon	TRUE	canonical	3	471	junction_4	36.8801946894343	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTTTATATATTTAT	NA	False	NA	21	True	AATAAA	-28	NA	133015870	133083839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ENSMUST00000029650.9	chr3	+	3101	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTAGATGTTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	132797600	132816749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ENSMUST00000029650.9-0	chr3	+	1602	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	98	1401	0	-1401	multi-exon	FALSE	canonical	3	154	junction_1	13.0213499897497	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTTGGATCTATTTATT	NA	False	NA	7	True	ATTAAA	-19	NA	132797698	132815348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ENSMUST00000029651.11	chr3	-	3503	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	19.4795930515641	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCCTCTCAGAT	NA	False	NA	-3	True	NA	NA	NA	132797586	132687512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ENSMUST00000029652.4	chr3	+	3521	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCGTCTAAGTGTATGT	NA	False	NA	46	True	AATAAA	-31	NA	80943722	81121347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUST00000029652.4-0	chr3	+	2759	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	756	6	0	0	multi-exon	FALSE	canonical	3	60	junction_1	10.870142593361	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	40	True	AATAAA	-25	NA	80944478	81121341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUST00000029663.11	chr3	-	1126	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_6	52.4195150259477	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTTGCTCATTTTTTG	NA	False	NA	-16	True	AATAAA	-31	NA	132389645	132366259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ENSMUST00000029666.14	chr3	+	2600	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	6.54292880561694	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGTTTGTGTGCATAT	NA	False	NA	7	True	AATAAA	-18	NA	131270528	131349432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUST00000029673.10	chr3	-	2363	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATGTCTCTTAACTGT	9189	False	NA	NA	False	NA	NA	NA	89230272	89221205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
ENSMUST00000029673.10-0	chr3	-	1775	5	FSM	ENSMUSG00000028039.12	ENSMUST00000029673.10	2363	5	0	588	0	-588	multi-exon	FALSE	canonical	3	176	junction_1	13.4047566184545	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACCTGAGTGTGTGT	9189	False	NA	NA	False	AATAAA	-9	NA	89230272	89221793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89222875_89223114_89223193_89223376_89223443_89223769_89224060_89230012
ENSMUST00000029674.8	chr3	-	1599	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTTCTTTGTGTGGCC	1612	False	NA	NA	False	AATAAA	-14	NA	89245335	89240696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ENSMUST00000029674.8-0	chr3	-	1249	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	0	350	0	-350	multi-exon	FALSE	canonical	3	34	junction_1	2.62466929133727	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGGCTCACACCTGT	1612	False	NA	-12	True	AATAAA	-18	NA	89245335	89241046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ENSMUST00000029676.12	chr3	-	2975	23	FSM	ENSMUSG00000028041.18	ENSMUST00000029676.12	2975	23	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	32.1478056009843	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257303	89246946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUST00000029679.4	chr3	-	849	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	-12	True	ATTAAA	-22	NA	89325690	89322778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89323271_89323580_89323709_89325461
ENSMUST00000029679.4-0	chr3	-	741	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	108	0	-56	0	multi-exon	FALSE	canonical	3	2335	junction_2	153.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGTGGTTATAAGACTGT	NA	False	NA	-12	True	ATTAAA	-22	NA	89325582	89322778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89323271_89323580_89323709_89325461
ENSMUST00000029684.15	chr3	+	1489	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	0	0	0	0	multi-exon	TRUE	canonical	3	743	junction_2	141.598022585063	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89084779	89090072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUST00000029692.15	chr3	+	1204	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	6.67532770731145	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCTTCAACCTGAACT	2217	False	NA	74	True	NA	NA	NA	88624144	88637034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ENSMUST00000029694.14	chr3	+	4300	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	44.2621032808889	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88528412	88555359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000029696.11	chr3	+	2981	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_11	33.2047619027415	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATGTGCATTGTT	8	True	NA	16	True	AATAAA	-16	NA	88593109	88620231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ENSMUST00000029698.15	chr3	-	668	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	977	False	NA	-6	True	AATAAA	-14	NA	88460331	88457125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
ENSMUST00000029698.15-0	chr3	-	537	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	131	0	0	0	multi-exon	FALSE	canonical	3	2467	junction_3	160.918889161244	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1108	False	NA	-6	True	AATAAA	-14	NA	88460200	88457125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
ENSMUST00000029699.13	chr3	-	3156	12	FSM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	44.0904404848575	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTGTGGTGTCTCTTTG	NA	False	NA	-3	True	AATACA	-19	NA	88410642	88388454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUST00000029700.12	chr3	-	3205	15	FSM	ENSMUSG00000028064.18	ENSMUST00000029700.12	3205	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	15.169787374238	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATGGCGTGCTGTGCTG	9696	False	NA	NA	False	ATTAAA	-23	NA	88363046	88343265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358758_88358994_88359094_88359326_88359390_88360277_88360439_88361985_88362154_88362854
ENSMUST00000029707.13	chr3	+	1630	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	22.2417148068898	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTCTTTGTTTTGTTTT	1719	False	NA	36	True	TTTAAA	-25	NA	87950414	87963297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUST00000029708.8	chr3	-	908	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	0	0	0	0	multi-exon	TRUE	canonical	3	839	junction_3	34.2963554915096	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965802	87963826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ENSMUST00000029717.4	chr3	-	1946	6	FSM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	13.2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCAGAGGTTTTACTT	NA	False	NA	NA	False	AATAAA	-20	NA	86906748	86903140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939_86906213_86906498
ENSMUST00000029719.14	chr3	-	4012	16	FSM	ENSMUSG00000028078.15	ENSMUST00000029719.14	4012	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_11	51.275031827283	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828159	86693459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ENSMUST00000029722.7	chr3	-	977	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	0	0	0	0	multi-exon	FALSE	canonical	3	3673	junction_2	2509.92074775281	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTGTCCATTGATTTG	NA	False	NA	NA	False	AATAAA	-21	NA	86050009	86045246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUST00000029727.8	chr3	+	3579	11	FSM	ENSMUSG00000028086.16	ENSMUST00000029727.8	2221	11	195	-1553	195	0	multi-exon	FALSE	canonical	2	9	junction_1	26.0516794084374	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	824	False	NA	25	True	AATAAA	-19	NA	84859647	84886505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_84859947_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ENSMUST00000029730.5	chr3	-	3008	23	FSM	ENSMUSG00000028089.6	ENSMUST00000029730.5	3008	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	88.0793336047933	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATGTTGCTTTTTT	NA	False	NA	-8	True	AATAGA	-13	NA	97517519	97468057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488294_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ENSMUST00000029738.14	chr3	-	4598	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGAGCAATTACACGT	1863	False	NA	NA	False	AATAAA	-14	NA	96812662	96775596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ENSMUST00000029738.14-0	chr3	-	1752	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	34	2812	0	393	multi-exon	FALSE	canonical	3	110	junction_5	18.4284960714547	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTTGGGGTCACTT	1897	False	NA	-28	True	AGTAAA	-15	NA	96812628	96778408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ENSMUST00000029740.14	chr3	+	2209	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_7	60.034885691571	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGCTTCAGCGTCTCAA	4795	False	NA	14	True	AATAAA	-21	NA	96634979	96698468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ENSMUST00000029741.9	chr3	-	2390	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	23.0394515240839	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGTCAGCACGATAAGGA	NA	False	NA	NA	False	CATAAA	-34	NA	96634944	96618805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ENSMUST00000029742.9	chr3	-	1039	8	FSM	ENSMUSG00000028100.12	ENSMUST00000029742.9	1039	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	22.7075461699679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGAGAGGCCCTACTC	NA	False	NA	-101	True	NA	NA	NA	96615855	96613483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615125_96615203_96615307_96615492_96615643
ENSMUST00000029752.15	chr3	-	2400	18	FSM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	0	0	0	0	multi-exon	TRUE	canonical	1	178	junction_5	104.738626737206	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ENSMUST00000029753.14	chr3	-	1895	11	FSM	ENSMUSG00000028108.17	ENSMUST00000029753.14	1895	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.90688837074973	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGTTGTCTTTAGTGC	6907	False	NA	NA	False	AATAAA	-18	NA	95646879	95641459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644367_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ENSMUST00000029754.13	chr3	+	1385	15	FSM	ENSMUSG00000028109.15	ENSMUST00000029754.13	1385	15	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	50.4359059821958	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTGTGTTTACCTGA	NA	False	NA	NA	False	AATAAA	-11	NA	95466988	95494903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUST00000029759.16	chr3	-	2741	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	25.8534330408942	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGTTTTCCTTAGA	NA	False	NA	-2	True	AATAAA	-17	NA	123179757	123161945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ENSMUST00000029766.9	chr3	+	3311	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_1	21.0877740616698	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTCTTTATTATTGA	NA	False	NA	NA	False	AATATA	-22	NA	122213426	122323840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ENSMUST00000029769.14	chr3	+	5589	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGATTTGTAAATATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	122039205	122064381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ENSMUST00000029769.14-0	chr3	+	1800	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	0	3789	0	0	multi-exon	FALSE	canonical	3	413	junction_2	51.1826793619352	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTGTGTGTTCTTGC	NA	False	NA	16	True	AATAAA	-28	NA	122039205	122060592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ENSMUST00000029770.8	chr3	-	3489	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_14	20.5277981251709	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTGCCTGACCTTTT	7131	False	NA	-1	True	ATTAAA	-22	NA	121608951	121552555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ENSMUST00000029771.13	chr3	+	1872	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	13.6176356244394	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCATTTATATCTTCCACT	NA	False	NA	NA	False	AATAAA	-22	NA	121517185	121528697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
ENSMUST00000029772.3	chr3	+	4189	9	FSM	ENSMUSG00000005774.13	ENSMUST00000029772.3	4189	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	4.45638586749397	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGAGTCGTTT	NA	False	NA	NA	False	NA	NA	NA	94862325	94868872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ENSMUST00000029773.13	chr3	+	2049	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	0	0	0	0	multi-exon	FALSE	canonical	3	4254	junction_2	486.023204750098	6077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGCTGGTTATTTTCT	NA	False	NA	27	True	AATAAA	-27	NA	121220145	121251856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ENSMUST00000029780.12	chr3	-	3364	14	FSM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	15.6821233920295	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCTGTTCCTTTTTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	119577037	119512390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ENSMUST00000029780.12-0	chr3	-	3010	14	FSM	ENSMUSG00000028134.12	ENSMUST00000029780.12	3364	14	102	252	0	-252	multi-exon	FALSE	canonical	3	41	junction_1	15.6821233920295	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119576935	119512642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ENSMUST00000029783.16	chr3	-	6261	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	37.6139590757922	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94490023	94404850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ENSMUST00000029786.14	chr3	+	1612	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	26.1002341411379	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGAACTTC	8490	False	NA	NA	False	NA	NA	NA	94350631	94356015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ENSMUST00000029796.11	chr3	-	3383	14	FSM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	15.970386796752	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGATTACTTGGT	NA	False	NA	-10	True	AATAAA	-17	NA	138780831	138631670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ENSMUST00000029800.9	chr3	+	3064	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	110	3479	0	0	multi-exon	FALSE	canonical	3	131	junction_4	20.1990098767242	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4935	False	NA	19	True	AATAAA	-32	NA	138448065	138610187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ENSMUST00000029804.13	chr3	-	2686	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	33.5143252953121	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTTTTTCTAGTTGTA	NA	False	NA	-9	True	ATTAAA	-15	NA	138195276	138164716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ENSMUST00000029812.14	chr3	-	4117	25	FSM	ENSMUSG00000028163.18	ENSMUST00000029812.14	4117	25	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	10.9790678363673	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTGATCTCTGCAAA	NA	False	NA	0	True	AATAAA	-25	NA	135397307	135290415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
ENSMUST00000029814.10	chr3	+	3675	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_8	25.1755554804656	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCATTGAACACCATGTC	NA	False	NA	11	True	AATAAA	-19	NA	135191371	135277165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ENSMUST00000029815.8	chr3	-	3361	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTTTCTTTTTTATGT	NA	False	NA	1	True	ATTAAA	-20	NA	135129686	135112172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_135114652_135116771_135116987_135129019
ENSMUST00000029815.8-1	chr3	-	1391	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	521	1449	0	-1449	multi-exon	FALSE	canonical	3	215	junction_1	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGATAACTCTTGTTG	NA	False	NA	-7	True	NA	NA	NA	135129165	135113621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_135114652_135116771_135116987_135129019
ENSMUST00000029817.11	chr3	+	1059	10	FSM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	15.3099660916801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTTTTTTCTTAA	NA	False	NA	21	True	AATAAA	-31	NA	134987021	135010187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ENSMUST00000029825.14	chr3	+	2920	12	FSM	ENSMUSG00000028175.16	ENSMUST00000029825.14	2920	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	20.9260800544746	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGGACTTTGGTTTA	NA	False	NA	NA	False	TATAAA	-21	NA	159201087	159235213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234641
ENSMUST00000029838.11	chr3	-	1661	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTGTGTGAGCCCAAA	NA	False	NA	NA	False	NA	NA	NA	146227184	146211710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ENSMUST00000029838.11-0	chr3	-	1255	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	18	388	0	0	multi-exon	FALSE	canonical	3	514	junction_1	36.008462547018	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAGGTATTAAAGTCC	NA	False	NA	-3	True	AATAAA	-25	NA	146227166	146212098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ENSMUST00000029842.9	chr3	+	1949	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_2	11.5	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAATATTTCAGAG	NA	False	NA	87	True	AATATA	-9	NA	145630016	145640111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145630271_145636160_145636450_145638705
ENSMUST00000029845.15	chr3	+	3764	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTAGTGTCTGTCTCGT	NA	False	NA	9	True	AATAAA	-18	NA	145464429	145600032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ENSMUST00000029845.15-0	chr3	+	2701	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	52	1011	52	0	multi-exon	FALSE	canonical	3	249	junction_5	17.0105849399719	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATGGTTGCCTTTGGGG	NA	False	NA	13	True	AATAAA	-18	NA	145464481	145599021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ENSMUST00000029846.5	chr3	-	2019	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	2.58602010819715	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAATGTATGTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	145355736	145352730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
ENSMUST00000029850.15	chr3	+	2507	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	18	True	AGTAAA	-18	NA	154302347	154328819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUST00000029850.15-0	chr3	+	1996	9	FSM	ENSMUSG00000028199.19	ENSMUST00000029850.15	2507	9	511	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	18	True	AGTAAA	-18	NA	154302858	154328819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUST00000029865.4	chr4	+	5404	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	56.8409085860605	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	-2	True	NA	16	True	AATAAA	-17	NA	11156430	11174379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
ENSMUST00000029866.16	chr4	+	3006	12	FSM	ENSMUSG00000028212.17	ENSMUST00000029866.16	3006	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	64.9822607707368	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAAGATGGTTGTCTTT	305	False	NA	NA	False	AATAAA	-23	NA	11191725	11204779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11191816_11192680_11192718_11192817_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUST00000029875.4	chr4	+	2339	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_4	16.4688257693808	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAGAGAAAATGATAAAT	21	False	NA	-79	True	NA	NA	NA	14864075	14915176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ENSMUST00000029877.9	chr4	-	2959	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGTAGAGGTTGCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	15945507	15917239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ENSMUST00000029877.9-0	chr4	-	1147	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	125	1687	-107	-1687	multi-exon	FALSE	canonical	3	139	junction_6	12.6207745648706	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGTTCTGAGGATC	-9	True	NA	-28	True	AATAAA	-16	NA	15945382	15918926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ENSMUST00000029879.15	chr4	+	2533	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_3	27.9629914152418	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-45	True	NA	9	True	AATAAA	-15	NA	15957924	15992589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ENSMUST00000029885.5	chr4	-	5648	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	15.541199724889	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATAGCTGTGTTTGGTTT	-13	True	NA	-6	True	AATAAA	-15	NA	19570108	19519253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ENSMUST00000029888.4	chr4	+	1053	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	-45	726	0	-726	multi-exon	FALSE	canonical	3	39	junction_9	10.5736686696625	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGACTGTATGGCTTTTT	-16	True	NA	9	True	TATAAA	-17	NA	19575161	19606206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUST00000029891.12	chr4	-	2454	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	0	236	0	-236	multi-exon	FALSE	canonical	3	50	junction_4	11.6233403467474	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCTAGTAAAAATGTTAT	280	False	NA	NA	False	AATAAA	-17	NA	3574853	3549276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ENSMUST00000029907.6	chr4	+	6642	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	16.4614577676685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGCCTCAGTGTGAC	-10	True	NA	22	True	AATAAA	-24	NA	6191097	6221688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ENSMUST00000029907.6-0	chr4	+	1540	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	0	5102	0	-5102	multi-exon	TRUE	canonical	3	103	junction_2	16.4614577676685	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACAACTGTCATAAA	-10	True	NA	NA	False	AATATA	-20	NA	6191097	6216586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ENSMUST00000029909.3	chr4	+	2651	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGCCATTGTGC	-10	True	NA	11	True	NA	NA	NA	21879672	21912162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ENSMUST00000029909.3-0	chr4	+	1248	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	0	1403	0	-1403	multi-exon	FALSE	canonical	3	302	junction_5	29.1414176426306	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAAAAATTTCTGTGTC	-10	True	NA	13	True	AATAAA	-15	NA	21879672	21910759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ENSMUST00000029910.12	chr4	-	3507	31	FSM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	11.571804814577	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCTTATCTTATTTAAA	25	True	NA	NA	False	ATTAAA	-21	NA	6454271	6396206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ENSMUST00000029911.12	chr4	+	4545	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCTATGATACATACA	5	False	NA	18	True	AATAAA	-18	NA	21847582	21876475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ENSMUST00000029911.12-0	chr4	+	2851	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	475	1219	0	0	multi-exon	FALSE	canonical	3	306	junction_11	60.0897400518935	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ENSMUST00000029912.11	chr4	+	2745	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTAACAGACTTAATGTT	7849	False	NA	NA	False	TATAAA	-13	NA	6365649	6396284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUST00000029912.11-0	chr4	+	2053	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	63	629	0	0	multi-exon	FALSE	canonical	3	359	junction_4	40.7944542799631	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	4	True	NA	13	True	ATTAAA	-18	NA	6365712	6395655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUST00000029915.6	chr4	-	1588	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	27.288581250528	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCATGTATTTCTTTAA	-17	True	NA	0	True	AATAAA	-24	NA	21767212	21757381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ENSMUST00000029920.15	chr3	+	2239	15	FSM	ENSMUSG00000028256.17	ENSMUST00000029920.15	2239	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	27.9021614260419	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAACAGTATAAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	144824380	144859650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ENSMUST00000029925.10	chr4	+	2088	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	48	1496	0	0	multi-exon	FALSE	canonical	3	446	junction_2	23.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGGTTTTTTCTTTC	11	True	NA	14	True	AATAAA	-27	NA	24898130	24903505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_24898303_24898572_24898677_24901693
ENSMUST00000029938.10	chr3	+	1455	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	21.5129160170246	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTTATAGTATTAAT	NA	False	NA	8	True	AATAAA	-15	NA	142470805	142489367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ENSMUST00000029941.16	chr3	-	5016	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	21.3476514451174	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACGCCTGGCCTTTTTT	7003	False	NA	-4	True	AATAAA	-19	NA	142101454	141945350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ENSMUST00000029950.10	chr4	+	6799	11	FSM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	76.4659401302305	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	-5	True	NA	7	True	AATAAA	-20	NA	32615477	32653265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_32615740_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ENSMUST00000029964.12	chr4	+	6746	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_4	5.10170008428563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAAGAAAATCCTGTCT	0	True	NA	NA	False	NA	NA	NA	28813130	28967499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ENSMUST00000029964.12-0	chr4	+	3611	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	21	3114	0	-2430	multi-exon	FALSE	canonical	2	9	junction_4	5.10170008428563	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAATATGTGATTTCA	21	False	NA	NA	False	AATAAA	-38	NA	28813151	28964385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ENSMUST00000029968.14	chr4	+	1868	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	0	0	0	0	multi-exon	TRUE	canonical	3	576	junction_1	51.5992441268264	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	-12	True	NA	12	True	AATAGA	-27	NA	34614956	34660167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUST00000029970.14	chr4	-	2039	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	17.6831523646385	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	-21	True	NA	-13	True	AATAAA	-14	NA	34687438	34663256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ENSMUST00000029972.4	chr4	-	786	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGAGTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-6	NA	34778423	34768663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34769148_34771257_34771415_34778278
ENSMUST00000029972.4-0	chr4	-	712	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	74	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGAGTTTTTCTTTT	2	True	NA	NA	False	AATAAA	-6	NA	34778349	34768663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34769148_34771257_34771415_34778278
ENSMUST00000029989.11	chr4	+	4154	21	FSM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	16.7996279720713	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTTGTGGTGTTCT	-13	True	NA	5	True	ATTAAA	-17	NA	49632065	49656887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ENSMUST00000030003.10	chr4	-	1077	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	46.9065264352651	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTAGTTCTACAGT	-22	True	NA	-1	True	AATAAA	-17	NA	45320629	45316612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
ENSMUST00000030010.4	chr4	-	10262	50	FSM	ENSMUSG00000015243.5	ENSMUST00000030010.4	10262	50	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_41	9.14791223225713	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGTTCCTTTTGTGCA	-3	True	NA	-3	True	AATAAA	-24	NA	53159895	53030786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_53034084_53035336_53035581_53036261_53036355_53036872_53036977_53038156_53038292_53038618_53038761_53040718_53040826_53041538_53041602_53042313_53042435_53042663_53042794_53044114_53044239_53045774_53045920_53046029_53046146_53048955_53049134_53050288_53050459_53050934_53051010_53059256_53059363_53060332_53060366_53061486_53061582_53062389_53062580_53065900_53066000_53067030_53067156_53068686_53068836_53069791_53069906_53070075_53070125_53071822_53072026_53072897_53072971_53074219_53074441_53075130_53075269_53075446_53075590_53076890_53077023_53077942_53078115_53079570_53079685_53080765_53080971_53081921_53082144_53083716_53083940_53084383_53084561_53085095_53085302_53085992_53086191_53089798_53089916_53090253_53090394_53092728_53092970_53095584_53095678_53107005_53107183_53109163_53109286_53127596_53127716_53128720_53128863_53132921_53133016_53143929_53144096_53159675
ENSMUST00000030013.12	chr4	-	955	6	FSM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	5.6	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGATGCAGTCTTCACAGA	4	True	NA	-1	True	AATAAA	-18	NA	46196311	46175221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
ENSMUST00000030014.9	chr4	+	3010	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	0	0	0	0	multi-exon	TRUE	canonical	3	296	junction_19	36.3529529761015	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGGAGTCATGGTTTAT	27	False	NA	21	True	AATAAA	-21	NA	46138612	46172403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUST00000030015.6	chr4	-	1527	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	13.5346776836392	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGAGCTTTGAAT	-14	True	NA	NA	False	ATTAAA	-27	NA	46389437	46379863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
ENSMUST00000030018.5	chr4	+	2179	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTTTGATGTGTGTGT	NA	False	NA	14	True	NA	NA	NA	46489247	46503632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUST00000030018.5-0	chr4	+	1151	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	71	957	0	-957	multi-exon	FALSE	canonical	3	811	junction_3	76.1377698648969	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTGCTGTCCAGTG	3	True	NA	13	True	AATAAA	-26	NA	46489318	46502675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUST00000030028.5	chr4	-	2624	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	0	0	0	0	multi-exon	TRUE	canonical	3	625	junction_9	43.7020339182862	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGCTTCCAGTTCTTA	20	True	NA	NA	False	AATAAA	-29	NA	48279558	48193322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ENSMUST00000030028.5-0	chr4	-	1457	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	0	1167	0	0	multi-exon	FALSE	canonical	3	625	junction_9	43.7020339182862	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTTAATTTTTTTCC	20	True	NA	-28	True	AATAAA	-14	NA	48279558	48194489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ENSMUST00000030029.10	chr4	+	5633	17	FSM	ENSMUSG00000028344.13	ENSMUST00000030029.10	5633	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	2.59506743650334	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCCCTGATGCCTTTAT	-22	True	NA	12	True	AATAAA	-19	NA	48279801	48431954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ENSMUST00000030030.15	chr4	-	3102	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_12	54.2776309771327	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	False	NA	-3	True	ATTAAA	-18	NA	48473459	48430857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ENSMUST00000030032.13	chr4	+	2461	10	FSM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	114.355952842942	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	12	True	NA	NA	False	AATATA	-15	NA	48585173	48663131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ENSMUST00000030039.13	chr1	+	6442	18	FSM	ENSMUSG00000028354.14	ENSMUST00000030039.13	6442	18	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	3.5625891599357	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCAGCTGTGTGC	NA	False	NA	7	True	AATAAA	-16	NA	174329390	174650295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_174331158_174364610_174364778_174409481_174409630_174420626_174420683_174435947_174437519_174440072_174440218_174474671_174474760_174494208_174494271_174521752_174521845_174521997_174522128_174523151_174523299_174526334_174526395_174527121_174527243_174547410_174547504_174571820_174571873_174618823_174618974_174647519_174647602_174648784
ENSMUST00000030051.6	chr4	-	546	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	121	384	121	-384	multi-exon	TRUE	canonical	3	4612	junction_4	90.890043459116	842	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATGTGTTTTAATA	0	True	NA	-3	True	AATAAA	-25	NA	57956290	57943756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
ENSMUST00000030069.7	chr4	-	1212	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	0	1084	0	-1084	multi-exon	FALSE	canonical	3	293	junction_9	57.656068390259	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCTGTGATAGAGAA	5	True	NA	-11	True	AATAAA	-18	NA	58987119	58966522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ENSMUST00000030074.8	chr4	+	4012	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	33.8664657146269	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGTAATGGACTGGCTT	9	False	NA	NA	False	AATAAA	-19	NA	59189256	59222833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ENSMUST00000030076.12	chr4	-	6855	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	23.0463900573291	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTCTGTGTTCTTGTC	NA	False	NA	-4	True	AATAAA	-26	NA	59549364	59471867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ENSMUST00000030078.12	chr4	+	2611	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATGTGCCTTTTATTTC	0	True	NA	20	True	NA	NA	NA	59581562	59618689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ENSMUST00000030078.12-0	chr4	+	1907	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	82	622	0	-621	multi-exon	FALSE	canonical	3	72	junction_3	12.963024338479	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTATGTAAAATGAAGC	21	False	NA	8	True	AATAAA	-18	NA	59581644	59618067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ENSMUST00000030080.7	chr4	+	7314	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCATGTGCTCATTTTTG	-32	True	NA	18	True	AATAAA	-27	NA	59805839	59904737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ENSMUST00000030080.7-0	chr4	+	2284	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	0	5030	0	-826	multi-exon	FALSE	canonical	3	98	junction_2	10.264471491509	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTAGTGTATGTGTTTT	-32	True	NA	NA	False	AAAAAG	-20	NA	59805839	59899707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ENSMUST00000030087.14	chr4	-	1349	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	-9	100	0	-100	multi-exon	FALSE	canonical	3	150	junction_2	19.4548194543152	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389133	62371970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ENSMUST00000030090.4	chr4	-	1206	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	45.4718149012465	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438155	62427405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUST00000030091.10	chr4	-	1805	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	9.56846672960488	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCATACAATGTGCTTT	NA	False	NA	1	True	AATAAA	-22	NA	62443305	62440885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
ENSMUST00000030095.11	chr4	-	3734	20	FSM	ENSMUSG00000008305.19	ENSMUST00000030095.11	2569	20	-767	-398	0	0	multi-exon	FALSE	canonical	3	29	junction_14	72.1381791945633	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119156	72036043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUST00000030102.12	chr4	+	4196	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	55.9303502727513	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	False	NA	14	True	ATTAAA	-15	NA	74170172	74324097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ENSMUST00000030103.9	chr4	-	741	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTAGTTCTTTTAATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	75196542	75195590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_75196007_75196217
ENSMUST00000030110.15	chr4	-	8763	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGTTTTTATCCTCTTA	NA	False	NA	-10	True	AATAAA	-18	NA	82777910	82716974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ENSMUST00000030110.15-0	chr4	-	3454	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	0	5309	0	0	multi-exon	FALSE	canonical	3	62	junction_1	13.8293166859393	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTGGTAAACTGCCT	NA	False	NA	NA	False	TATAAA	-34	NA	82777910	82722283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ENSMUST00000030117.5	chr4	-	2418	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTCCATGTTGATGTCC	8535	False	NA	61	True	ACTAAA	-34	NA	40757923	40736541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ENSMUST00000030117.5-0	chr4	-	1751	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	92	575	0	-575	multi-exon	FALSE	canonical	3	1190	junction_8	75.1643928360578	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAAGTGCTCATAAGGGG	25	True	NA	-14	True	AATAAA	-17	NA	40757831	40737116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ENSMUST00000030118.10	chr4	+	3376	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	0	0	0	0	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGCTGTTCAGCATTTT	-7	True	NA	NA	False	ATTAAA	-13	NA	40722479	40734964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUST00000030118.10-0	chr4	+	1428	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	79	1869	0	-805	multi-exon	FALSE	canonical	3	1814	junction_2	361.659175709673	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAGCTCTGACTTTGC	22	False	NA	1	True	AATAAA	-7	NA	40722558	40733095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUST00000030119.10	chr4	-	1162	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	0	4088	0	-228	multi-exon	FALSE	canonical	3	144	junction_6	8.59757915618919	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGCTTATTTATTCT	1	True	NA	NA	False	ACTAAA	-16	NA	40703194	40686469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
ENSMUST00000030121.13	chr4	-	3983	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	16.0872620417522	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTCTTTTCTTTTTTG	-20	True	NA	-1	True	AATAAA	-18	NA	40854005	40804601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
ENSMUST00000030125.5	chr4	-	1295	7	FSM	ENSMUSG00000028416.14	ENSMUST00000030125.5	1295	7	0	0	0	0	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTGGCTCTGTGGTGG	3	True	NA	-9	True	AAAAAG	-37	NA	40948243	40936400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUST00000030127.13	chr4	+	2862	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	-16	True	NA	NA	False	ATTAAA	-31	NA	53826044	53862019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ENSMUST00000030127.13-0	chr4	+	1434	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	0	1428	0	-1428	multi-exon	FALSE	canonical	3	107	junction_3	9.52050418832952	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGTGTATACAGTTATT	-16	True	NA	4	True	AATAAA	-13	NA	53826044	53860591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ENSMUST00000030128.6	chr4	+	1519	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	44.0352363547231	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTGTAGTATCGCTTT	0	True	NA	14	True	AATAAA	-16	NA	40948406	40965303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ENSMUST00000030133.15	chr4	+	4349	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCCTCTTCATTTTT	6045	False	NA	NA	False	AATAAA	-15	NA	40970905	41013871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ENSMUST00000030133.15-0	chr4	+	3020	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	66	1263	66	0	multi-exon	FALSE	canonical	3	463	junction_8	92.9020033272815	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-20	True	NA	16	True	NA	NA	NA	40970971	41012608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ENSMUST00000030134.9	chr4	+	3810	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCATTTCTCATTTTTT	NA	False	NA	30	True	TATAAA	-20	NA	55350042	55392237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUST00000030134.9-1	chr4	+	2767	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	9	1034	0	-1034	multi-exon	FALSE	canonical	3	1075	junction_8	117.532764016184	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCACAGTGTTGGCTTT	-9	True	NA	28	True	ATTAAA	-10	NA	55350051	55391203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUST00000030138.9	chr4	-	4599	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_9	34.7585960591046	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	NA	False	NA	-4	True	NA	NA	NA	41124455	41114426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ENSMUST00000030140.3	chr4	-	6160	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	0	0	0	0	multi-exon	TRUE	canonical	3	245	junction_24	36.3764927995411	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTCTCTCTTCTGCTGA	NA	False	NA	NA	False	AATGAA	-15	NA	56802331	56749679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ENSMUST00000030140.3-0	chr4	-	4773	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	55	1332	55	0	multi-exon	FALSE	canonical	3	245	junction_24	36.3764927995411	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGACTCAGTGGTAA	17	True	NA	-18	True	AATAAA	-18	NA	56802276	56751011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ENSMUST00000030142.4	chr4	-	3247	16	FSM	ENSMUSG00000028434.13	ENSMUST00000030142.4	3247	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	13.208414826247	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTTACAATGTGTCTC	315	False	NA	0	True	AATAAA	-32	NA	57143437	57061725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_57063280_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
ENSMUST00000030143.13	chr4	-	4368	29	FSM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_17	84.4073804080362	1943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	218	False	NA	-6	True	AATAAA	-12	NA	41275135	41194315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ENSMUST00000030145.9	chr4	-	3442	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	50.3213113402264	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGAGTGACTATATA	1860	False	NA	0	True	AATAAA	-18	NA	41314889	41291299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ENSMUST00000030154.7	chr4	+	845	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	26.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGATGCTTTCTTGGAC	4	True	NA	32	True	AATAAA	-28	NA	41465150	41480926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_41465181_41477513_41477648_41480245
ENSMUST00000030158.11	chr4	-	817	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	7	149	0	-149	multi-exon	FALSE	canonical	3	869	junction_5	34.1829229619443	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTGGCCTGCTGA	-9	True	NA	NA	False	AATAAA	-18	NA	41723163	41714946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ENSMUST00000030164.8	chr4	-	3316	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	0	0	0	0	multi-exon	FALSE	canonical	2	1390	junction_12	381.614124271823	2473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCGTTCTGGCCACTAT	10011	False	NA	-15	True	AATAAA	-18	NA	43000507	42979962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUST00000030165.5	chr4	-	2771	14	FSM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	17.9578731229673	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	163	False	NA	-6	True	ATTAAA	-16	NA	43010355	43002342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
ENSMUST00000030169.15	chr4	-	1874	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	0	0	0	0	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGAGATGGCTGTGGTG	8589	False	NA	-4	True	AATAAA	-19	NA	43031710	43027689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUST00000030169.15-0	chr4	-	1198	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	340	336	0	0	multi-exon	FALSE	canonical	3	2352	junction_9	320.749854459519	1932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	8929	False	NA	-7	True	AATAAA	-16	NA	43031370	43028025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUST00000030181.12	chr4	+	817	6	FSM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_5	16.9162643630324	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	-26	True	NA	14	True	AGTAAA	-45	NA	43493361	43495921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
ENSMUST00000030185.5	chr9	-	1797	9	FSM	ENSMUSG00000032366.16	ENSMUST00000030185.5	1797	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	240.497628626563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	False	NA	-9	True	AATAAA	-15	NA	66956544	66936129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000030187.14	chr4	-	8393	57	FSM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	0	0	0	0	multi-exon	FALSE	canonical	2	114	junction_34	45.4919257244893	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAGCCTGGCTTTATG	-9	True	NA	-6	True	AATAAA	-12	NA	43562422	43531518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ENSMUST00000030189.14	chr4	-	3544	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	9.51314879522022	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTGGTGTGTCTGAG	-7	True	NA	-1	True	AATAAA	-16	NA	43578873	43566927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ENSMUST00000030192.5	chr4	-	610	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_3	25.1433390781734	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	-12	True	NA	-7	True	AATAAA	-14	NA	43656466	43654228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ENSMUST00000030198.7	chr4	+	4433	21	FSM	ENSMUSG00000028476.14	ENSMUST00000030198.7	4433	21	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_14	9.31812749429841	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGTCTTTACTGT	-12	True	NA	NA	False	AATGAA	-19	NA	43875529	43944806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43875706_43890963_43891023_43894818_43894894_43895849_43895887_43897994_43898081_43900069_43900118_43909579_43909614_43911931_43912130_43913784_43914053_43918313_43918494_43922811_43923025_43925060_43925198_43927145_43927287_43928276_43928466_43930192_43930316_43930888_43931061_43937309_43937503_43938888_43939100_43940656_43940731_43942273_43942430_43943143
ENSMUST00000030202.14	chr4	+	2320	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_4	22.0567450001128	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCTCTAATGCGATT	NA	False	NA	36	True	AATAAA	-21	NA	43957400	43979118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
ENSMUST00000030205.14	chr4	-	842	7	FSM	ENSMUSG00000038172.15	ENSMUST00000030205.14	842	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	86.0905531015647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCTCTATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	83242426	83177434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_83177704_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUST00000030206.10	chr4	+	1405	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_6	50.2767341819255	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATTCTTTTCTCCAA	NA	False	NA	18	True	TATAAA	-18	NA	83335960	83371577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ENSMUST00000030207.15	chr4	-	3251	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_5	345.826738892951	2148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404696	83373916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ENSMUST00000030212.15	chr4	+	2822	9	FSM	ENSMUSG00000028488.16	ENSMUST00000030212.15	2822	9	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	17.2191753577226	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTCTGCTTCTTCC	NA	False	NA	28	True	AATAAA	-18	NA	85123677	85307617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85295765_85297488_85297648_85299641_85299746_85304026_85304158_85305790
ENSMUST00000030243.8	chr4	-	7969	9	FSM	ENSMUSG00000028518.9	ENSMUST00000030243.8	7969	9	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_5	8.06903804675625	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTGAAGCTGCCTT	NA	False	NA	0	True	AATAAA	-15	NA	104967087	104887070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ENSMUST00000030247.11	chr4	+	4703	14	FSM	ENSMUSG00000028522.17	ENSMUST00000030247.11	4703	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.0041968503722	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTTGTGTGGTGTCTA	3682	False	NA	12	True	ATTAAA	-13	NA	102972756	103022946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_102972858_102975435_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ENSMUST00000030254.15	chr4	+	1898	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_3	48.8011839564939	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	8215	False	NA	8	True	AATAAA	-20	NA	101504914	101516561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
ENSMUST00000030257.15	chr4	+	5765	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	18.5926832335326	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCTGCTGGTATCTGA	NA	False	NA	18	True	AATAAA	-20	NA	100633871	100861741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ENSMUST00000030263.9	chr4	-	2549	12	FSM	ENSMUSG00000028538.13	ENSMUST00000030263.9	2549	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	17.3052325722645	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTTGTTTTCTCTG	1886	False	NA	-1	True	AATAAA	-18	NA	117992087	117789350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
ENSMUST00000030265.4	chr4	-	2555	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	6.70522184569608	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTGGGCCTAAACAAA	NA	False	NA	NA	False	AATAAA	-13	NA	117749229	117745839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
ENSMUST00000030265.4-0	chr4	-	2291	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	0	264	0	0	multi-exon	FALSE	canonical	3	66	junction_1	6.70522184569608	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCTTTATTCAC	NA	False	NA	-7	True	AATAAA	-15	NA	117749229	117746103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
ENSMUST00000030266.12	chr4	-	2312	8	FSM	ENSMUSG00000028541.15	ENSMUST00000030266.12	2312	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	8.55951553082585	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTGTCTGTCTGTGA	NA	False	NA	-9	True	AGTAAA	-17	NA	117740684	117730327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117738972_117739015_117740298
ENSMUST00000030269.14	chr4	+	3479	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	0	0	0	0	multi-exon	FALSE	canonical	2	62	junction_6	13.9750411501337	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692247	117726502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUST00000030274.7	chr4	+	1455	6	FSM	ENSMUSG00000028545.14	ENSMUST00000030274.7	1826	6	0	371	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.19230199429887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGCATTTTTTTTGT	NA	False	NA	8	True	AATAAA	-20	NA	111272202	111317124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_111272598_111288213_111288348_111290365_111290751_111305702_111305852_111311281_111311496_111316946
ENSMUST00000030279.15	chr4	+	3178	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	14.1265707091282	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTTTTGTTTTGGTTTT	NA	False	NA	13	True	NA	NA	NA	99082170	99148024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
ENSMUST00000030284.10	chr4	-	4061	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	15	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTAAACCAGAGTGGCC	NA	False	NA	-6	True	AGTAAA	-16	NA	109333872	109308294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_109311620_109314094_109314265_109333306
ENSMUST00000030284.10-0	chr4	-	2601	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	0	1460	0	341	multi-exon	FALSE	canonical	3	201	junction_2	15	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTGAAGTTGTGCCA	NA	False	NA	-12	True	AGTAAA	-9	NA	109333872	109309754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_109311620_109314094_109314265_109333306
ENSMUST00000030285.8	chr4	+	1606	8	FSM	ENSMUSG00000028558.15	ENSMUST00000030285.8	1606	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	5.473498303048	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTAGTAGTTAAAACT	NA	False	NA	NA	False	AGTAAA	-12	NA	109092828	109111448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
ENSMUST00000030288.14	chr4	-	2871	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_18	119.667039647815	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	109059469	108918851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000030289.9	chr4	+	3577	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	150.352710318105	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812046	98823780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ENSMUST00000030292.12	chr4	-	952	7	FSM	ENSMUSG00000028563.17	ENSMUST00000030292.12	952	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	263.049266614957	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGACCTGTTATTAA	NA	False	NA	-4	True	AATAAA	-18	NA	98271483	98243606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263251_98268854_98268929_98271306
ENSMUST00000030296.9	chr4	+	1359	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_6	37.6592913133296	398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGCCTTTGGTTACTGG	NA	False	NA	28	True	ATTAAA	-22	NA	108691797	108719324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUST00000030303.6	chr4	-	1863	9	FSM	ENSMUSG00000052914.5	ENSMUST00000030303.6	3605	9	130	1612	130	-1612	multi-exon	FALSE	canonical	1	1	junction_1	1.40867845869808	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAACATCAAAATTAAAAC	NA	False	NA	NA	False	NA	NA	NA	96441768	96405986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_96406443_96411939_96412079_96414075_96414264_96417621_96417761_96419868_96420046_96423682_96423844_96424232_96424383_96433935_96434099_96441478
ENSMUST00000030306.14	chr4	+	5517	22	FSM	ENSMUSG00000028572.14	ENSMUST00000030306.14	5517	22	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	15.5427871146882	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGGTTTTAGTGGC	4714	False	NA	32	True	AATAAA	-45	NA	95855476	95913650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044_95903139_95904645_95904681_95905179_95905263_95905824_95905926_95907839_95907942_95909804_95909874_95910403
ENSMUST00000030311.11	chr4	+	2139	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_8	18.5526129152575	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCCTTTTCCTGTGTT	NA	False	NA	10	True	AATAAA	-11	NA	94502727	94581466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ENSMUST00000030313.9	chr4	-	2107	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	22.29798197147	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	94445033	94388317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
ENSMUST00000030315.13	chr4	+	5389	22	FSM	ENSMUSG00000028580.16	ENSMUST00000030315.13	5389	22	0	0	0	0	multi-exon	TRUE	canonical	3	218	junction_8	122.217214904643	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390631	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUST00000030317.14	chr4	-	1817	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_2	58.6153563496802	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCCAACATTTGACACT	NA	False	NA	-23	True	AATAAA	-20	NA	143026134	142994000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ENSMUST00000030320.13	chr4	+	3303	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_8	22.4730934798829	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGTAGCCATTTTTA	3533	False	NA	13	True	NA	NA	NA	108477136	108491320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ENSMUST00000030326.10	chr4	-	2460	4	FSM	ENSMUSG00000028591.12	ENSMUST00000030326.10	2460	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	9.80929264637478	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGGTTTTGCTT	NA	False	NA	-4	True	AATAAA	-15	NA	144135034	144118243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_144119688_144121144_144121730_144122249_144122573_144134926
ENSMUST00000030332.7	chr4	-	1289	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	16.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAAATGTGTTTGCCATT	NA	False	NA	-11	True	AATAAA	-40	NA	108264158	108257586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108258195_108260397_108260660_108263739
ENSMUST00000030332.7-0	chr4	-	1052	3	FSM	ENSMUSG00000028597.12	ENSMUST00000030332.7	1289	3	237	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	16.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAAATGTGTTTGCCATT	NA	False	NA	-11	True	AATAAA	-40	NA	108263921	108257586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108258195_108260397_108260660_108263739
ENSMUST00000030339.13	chr4	-	3414	13	FSM	ENSMUSG00000028602.13	ENSMUST00000030339.13	3414	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	3.685557397916	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCCTTTGGTATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	145041717	144993706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_144995806_145000852_145001067_145004095_145004122_145011715_145011770_145011895_145011995_145014548_145014647_145014995_145015087_145019163_145019331_145019668_145019760_145023419_145023564_145025303_145025421_145029647_145029736_145041591
ENSMUST00000030340.15	chr4	-	2640	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_7	132.795314509043	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGGCTTTTACTGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	107975729	107901035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ENSMUST00000030345.15	chr4	-	2372	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	11.5866302262565	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTCCTTTTTCCTTA	NA	False	NA	0	True	AATAAA	-18	NA	107780807	107761177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
ENSMUST00000030348.6	chr4	+	692	5	FSM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	47.9446295219809	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATATGTGAATTCTC	NA	False	NA	50	True	AATAAA	-35	NA	107736951	107744621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113_107742197_107744373
ENSMUST00000030360.11	chr4	-	1755	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	9.55755924781585	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCTTTTGAATTGCAGA	NA	False	NA	-5	True	AATAAA	-20	NA	107110729	107090710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
ENSMUST00000030361.11	chr4	+	1775	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_5	112.332959889567	1055	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGAGTGTTGGGCTTTCT	NA	False	NA	15	True	ATTAAA	-27	NA	107035595	107058193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUST00000030365.6	chr4	-	1498	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_3	34.5976877840124	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCTGTGAGATATTA	NA	False	NA	-8	True	AATAAA	-23	NA	106924065	106913070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ENSMUST00000030367.15	chr4	+	3195	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_13	39.9235428457496	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCTGACATACTTGT	NA	False	NA	16	True	ATTAAA	-20	NA	106768666	106906891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUST00000030367.15-0	chr4	+	2152	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	41	1002	0	0	multi-exon	FALSE	canonical	3	121	junction_13	39.9235428457496	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTGCTGGTTTATTTCA	NA	False	NA	12	True	AATAAA	-12	NA	106768707	106905889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUST00000030372.6	chr4	+	2924	32	FSM	ENSMUSG00000028626.6	ENSMUST00000030372.6	2924	32	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	8.6239508704552	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTCTTGTGGATGAGG	NA	False	NA	21	True	AATAAA	-22	NA	120896581	120912519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_120896984_120898161_120898237_120899490_120899527_120899612_120899676_120900892_120900947_120901058_120901095_120901191_120901216_120901471_120901526_120901861_120901916_120902019_120902068_120902195_120902253_120902337_120902392_120902680_120902735_120903122_120903177_120903266_120903321_120903425_120903480_120906858_120906913_120907272_120907327_120907551_120907606_120908410_120908456_120908847_120908902_120909164_120909219_120909423_120909478_120909554_120909627_120909777_120909814_120909949_120909995_120910087_120910121_120910254_120910402_120910635_120910691_120910966_120911156_120911449_120911528_120911792
ENSMUST00000030375.9	chr4	-	1996	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGATGTTTGTGTG	NA	False	NA	-9	True	AATAAA	-22	NA	120782202	120778392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120779894_120781707
ENSMUST00000030376.8	chr4	-	3919	14	FSM	ENSMUSG00000028631.8	ENSMUST00000030376.8	3919	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	1.49159380228195	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTGGTCTTGGTTGTGC	9431	False	NA	NA	False	ATTAAA	-15	NA	120604445	120553334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120555304_120555695_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120568419_120568582_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121_120574249_120574654_120574746_120604056
ENSMUST00000030381.8	chr4	-	2705	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_8	52.1791784782653	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427473	120397064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ENSMUST00000030385.13	chr4	-	1443	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	22	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	5505	False	NA	-4	True	AATAAA	-30	NA	119279617	119275726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119276491_119278776_119278881_119279042
ENSMUST00000030391.9	chr2	+	2838	7	FSM	ENSMUSG00000028640.12	ENSMUST00000030391.9	2838	7	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	51.676611946046	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGACCCTTTTT	NA	False	NA	25	True	AATAAA	-27	NA	172391512	172400542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ENSMUST00000030393.13	chr4	+	3188	15	FSM	ENSMUSG00000028641.17	ENSMUST00000030393.13	3188	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	108.340567524028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGGTTTGTGTAT	NA	False	NA	4	True	NA	NA	NA	119090135	119106172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098858_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ENSMUST00000030395.9	chr4	+	733	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	4.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTTCTTGCTTTAGAG	NA	False	NA	11	True	AATAAA	-14	NA	119052502	119058495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_119052684_119053068_119053219_119058093
ENSMUST00000030398.10	chr4	+	2514	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	93	653	0	0	multi-exon	TRUE	canonical	3	565	junction_3	58.8236535946402	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	669	False	NA	36	True	TATAAA	-18	NA	118966000	118994527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ENSMUST00000030399.7	chr4	+	2593	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	23.3553467587664	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTTGTGTGATGTGT	NA	False	NA	20	True	AATAAA	-20	NA	123811238	123830790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ENSMUST00000030400.14	chr4	+	1685	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_4	22.6163657557973	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTCTTTCTTTTTGGT	NA	False	NA	40	True	NA	NA	NA	123798624	123806062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ENSMUST00000030401.14	chr4	-	525	3	FSM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	1318	junction_2	395	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1832	False	NA	-25	True	AATAAA	-17	NA	123611995	123606502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123606720_123609656_123609875_123611905
ENSMUST00000030404.5	chr4	-	1188	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	0	0	0	0	multi-exon	TRUE	canonical	3	832	junction_9	90.3078411481501	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033744	123020907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUST00000030407.8	chr4	+	3501	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3626	False	NA	NA	False	AATAAA	-18	NA	122889891	122896278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_122890812_122893697
ENSMUST00000030412.11	chr4	+	2381	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	20.6579282601136	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTGTATAATTTTAAG	NA	False	NA	103	True	ACTAAA	-25	NA	122730034	122752871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ENSMUST00000030417.10	chr4	-	1448	6	FSM	ENSMUSG00000006699.18	ENSMUST00000030417.10	1448	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	708.103664727136	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGGTGAAGCTTTATTC	NA	False	NA	NA	False	ATTAAA	-23	NA	137085010	137049072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_137049931_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUST00000030417.10-0	chr4	-	771	6	FSM	ENSMUSG00000006699.18	ENSMUST00000030417.10	1448	6	0	677	0	-677	multi-exon	FALSE	canonical	3	65	junction_1	708.103664727136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTCTGCGTCTTCTTA	NA	False	NA	-23	True	AATAAA	-14	NA	137085010	137049749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_137049931_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUST00000030427.6	chr4	-	4708	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGAGCCTTTCCTCAT	7704	False	NA	-1	True	AATAAA	-17	NA	135749074	135730678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ENSMUST00000030427.6-0	chr4	-	2676	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	107	1925	107	-1925	multi-exon	FALSE	canonical	3	104	junction_6	17.5182761709022	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGGTTTTTTGTTTTT	7811	False	NA	-9	True	AATAAA	-28	NA	135748967	135732603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ENSMUST00000030432.8	chr4	+	1418	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_3	79.965617611571	571	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAACGTGTGTTTATGGG	NA	False	NA	NA	False	ATTAAA	-23	NA	135673758	135689928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUST00000030434.5	chr4	+	2525	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	135648045	135667622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ENSMUST00000030434.5-0	chr4	+	1503	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	0	1022	0	0	multi-exon	FALSE	canonical	3	268	junction_1	34.7786000351964	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGGTCAATCTCCCAA	NA	False	NA	20	True	AATAAA	-20	NA	135648045	135666600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ENSMUST00000030436.12	chr4	-	1919	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	18.5	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTCTTTTTATGTAAG	NA	False	NA	-2	True	AATAAA	-27	NA	135601161	135598228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135599766_135600205_135600411_135600984
ENSMUST00000030439.15	chr4	-	3029	15	FSM	ENSMUSG00000028677.20	ENSMUST00000030439.15	3029	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	470.113273367088	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGTGTTTGAAGA	NA	False	NA	NA	False	ATTAAA	-15	NA	117354249	117128659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
ENSMUST00000030443.12	chr4	+	4382	22	FSM	ENSMUSG00000028681.12	ENSMUST00000030443.12	4382	22	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	13.5888776715328	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGATGGCTGGAGTTTT	NA	False	NA	2	True	AATATA	-16	NA	116953271	116972580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116953625_116954043_116954237_116961929_116962120_116962226_116962297_116962430_116962523_116963131_116963328_116965095_116965218_116965351_116965500_116965579_116965712_116965800_116965957_116966052_116966146_116966489_116966616_116966708_116966828_116966933_116967283_116967391_116967705_116967795_116967939_116968023_116968205_116968321_116968603_116968711_116968850_116971208_116971352_116971439_116971540_116971836
ENSMUST00000030446.15	chr4	-	1489	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCGGCTCCTTTGTTCCT	NA	False	NA	-8	True	NA	NA	NA	116851610	116847161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ENSMUST00000030446.15-0	chr4	-	1204	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	33	252	0	0	multi-exon	FALSE	canonical	3	335	junction_9	15.6331398550769	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAGCATGTTCTTTTGTA	NA	False	NA	-19	True	AATAAA	-16	NA	116851577	116847413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ENSMUST00000030451.10	chr4	-	2090	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	11.8252583351856	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1939	False	NA	0	True	TTTAAA	-42	NA	116664837	116661198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ENSMUST00000030453.5	chr4	-	2106	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	0	0	0	0	multi-exon	TRUE	canonical	3	184	junction_2	7.07106781186548	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCATGTTTCCTTGAAC	NA	False	NA	NA	False	ACTAAA	-25	NA	116565603	116559475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ENSMUST00000030453.5-0	chr4	-	1833	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	118	155	0	-155	multi-exon	FALSE	canonical	3	184	junction_2	7.07106781186548	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAACTTTGTTTGCCTGTTT	NA	False	NA	-2	True	AATACA	-31	NA	116565485	116559630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ENSMUST00000030454.6	chr4	+	636	5	FSM	ENSMUSG00000028691.13	ENSMUST00000030454.6	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	22651	junction_2	678.113329392661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGGCAGTGATACCA	NA	False	NA	NA	False	ATTAAA	-34	NA	116544508	116556383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUST00000030455.15	chr4	-	1420	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_3	104.145331148352	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	-1	True	AATAAA	-15	NA	116508877	116493706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ENSMUST00000030456.14	chr4	-	2520	16	FSM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_15	334.076930594669	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116485138	116458805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528_116484627_116485086
ENSMUST00000030457.12	chr4	-	2118	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTTGTTCTGGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	116484694	116458248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ENSMUST00000030457.12-0	chr4	-	1561	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	0	557	0	0	multi-exon	FALSE	canonical	3	48	junction_9	345.747385294336	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116484694	116458805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ENSMUST00000030460.15	chr4	+	3588	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	28.7128847743677	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTTTACTGAAGGAA	NA	False	NA	12	True	AATAAA	-18	NA	116414854	116451079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ENSMUST00000030464.14	chr4	+	5257	10	FSM	ENSMUSG00000028698.14	ENSMUST00000030464.14	5257	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	3.32591767713239	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTTTTTGGTTTTCTTGG	3291	False	NA	NA	False	AATAAA	-15	NA	116078857	116160253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116079611_116113364_116113474_116116741_116116841_116127984_116128166_116129935_116130062_116143252_116143396_116144019_116144197_116148871_116148947_116149293_116149465_116156830
ENSMUST00000030465.10	chr4	-	1242	8	FSM	ENSMUSG00000028699.10	ENSMUST00000030465.10	1985	8	0	743	0	696	multi-exon	FALSE	canonical	0	0	junction_3	1.48461497791618	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAATTGACCTGTATAT	NA	False	NA	NA	False	TATAAA	-13	NA	116024797	116019808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116020233_116020503_116020588_116020824_116020978_116021058_116021158_116021263_116021339_116021515_116021723_116024204_116024270_116024662
ENSMUST00000030471.9	chr4	+	3065	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	24.5573151707401	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCCTTCTTGATGATT	NA	False	NA	9	True	AATAAA	-17	NA	115932465	115954240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ENSMUST00000030474.12	chr4	-	1984	5	FSM	ENSMUSG00000028706.15	ENSMUST00000030474.12	1984	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	58.8021045541739	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTGTGCGTGCCTTG	NA	False	NA	-6	True	AGTAAA	-17	NA	115905687	115890201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115898074_115898305_115905526
ENSMUST00000030475.3	chr4	-	2439	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	15.8417170786503	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTCTTGAGATTTG	NA	False	NA	NA	False	ATTAAA	-38	NA	115911073	115890038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ENSMUST00000030477.4	chr4	+	2884	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	9.42809041582063	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTGGGAAGTGGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	115685288	115693382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
ENSMUST00000030490.13	chr4	+	5285	17	FSM	ENSMUSG00000028718.17	ENSMUST00000030490.13	5285	17	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_15	11.7923107892389	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGACTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	114857355	114900393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ENSMUST00000030491.9	chr4	-	3170	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGGTTCTGATATCTG	NA	False	NA	NA	False	AATAAA	-25	NA	114844438	114816532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
ENSMUST00000030491.9-1	chr4	-	1897	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	0	1273	0	-1273	multi-exon	FALSE	canonical	3	519	junction_1	39.0302446828098	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTTTTTTCTTTTTT	NA	False	NA	24	True	AATAAA	-43	NA	114844438	114817805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
ENSMUST00000030501.15	chr4	+	2960	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	0	0	0	0	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTCATGATGTCTGTT	NA	False	NA	6	True	NA	NA	NA	118477995	118484973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUST00000030501.15-0	chr4	+	1111	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	49	1800	0	358	multi-exon	FALSE	canonical	3	2261	junction_5	110.190105612981	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGATACTCTTGGGTTA	NA	False	NA	14	True	AATAAA	-14	NA	118478044	118483173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUST00000030513.13	chr4	-	930	8	FSM	ENSMUSG00000028741.14	ENSMUST00000030513.13	930	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	364.486667262665	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGACTCTTTCTTTTTTTT	5974	False	NA	-12	True	AATAAA	-34	NA	139079609	139074755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_139075114_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ENSMUST00000030524.14	chr4	-	2131	6	FSM	ENSMUSG00000041193.16	ENSMUST00000030524.14	2131	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	8.52291030106501	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACATGTTTTGGTGTA	NA	False	NA	-5	True	AATAAA	-24	NA	138590780	138526559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480
ENSMUST00000030530.6	chr4	+	1618	6	FSM	ENSMUSG00000028750.13	ENSMUST00000030530.6	1618	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.01980390271856	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCTGGTGTCTGAAGTT	NA	False	NA	NA	False	AGTAAA	-15	NA	138452635	138471886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138452800_138453041_138453169_138458834_138458936_138461572_138461718_138463292_138463397_138470909
ENSMUST00000030536.13	chr4	-	2375	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	15.5261464790783	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGTGTACACTGGAGC	NA	False	NA	-9	True	ATTAAA	-16	NA	138053618	138040722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ENSMUST00000030538.5	chr4	+	2120	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGTGTTCTTTTAGTTC	NA	False	NA	37	True	NA	NA	NA	138032040	138039939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUST00000030538.5-0	chr4	+	1571	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	147	402	147	-402	multi-exon	FALSE	canonical	3	2240	junction_8	67.8427593778437	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACCTGGCCCCATGA	NA	False	NA	32	True	AATAAA	-18	NA	138032187	138039537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUST00000030541.13	chr4	+	3311	13	FSM	ENSMUSG00000028759.14	ENSMUST00000030541.13	3311	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.3320895176027	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCAGTACCTGTCCT	4565	False	NA	42	True	AATAAA	-40	NA	137943937	137970481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUST00000030551.11	chr4	-	2522	12	FSM	ENSMUSG00000028766.11	ENSMUST00000030551.11	2522	12	0	0	0	0	multi-exon	FALSE	canonical	3	1320	junction_11	106.491531498949	2823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGAGTCTTTGTGGTC	NA	False	NA	-2	True	AATAAA	-24	NA	137523695	137469043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137523552
ENSMUST00000030556.8	chr5	-	3280	18	FSM	ENSMUSG00000028771.14	ENSMUST00000030556.8	3280	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_17	13.1951023733656	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTATTGTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-25	NA	21260909	21191642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
ENSMUST00000030563.6	chr4	+	1551	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	25.1047804212664	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTCTTGACTGTGTGT	9278	False	NA	25	True	AATAAA	-32	NA	130001348	130021927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUST00000030578.14	chr4	+	3646	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	910.936792538319	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGAATTTCTTCCCC	NA	False	NA	15	True	AATAAA	-16	NA	129714013	129743771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ENSMUST00000030581.10	chr4	-	2063	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	8.67698104181403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	128856232	128825814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
ENSMUST00000030583.13	chr4	+	986	6	FSM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	119.822535443046	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAGCACTCATCTATGT	2869	False	NA	22	True	ATTAAA	-26	NA	128887016	128902194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826
ENSMUST00000030586.15	chr4	-	879	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	6.82934843158555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTCGGTGCTCTCCTTGT	NA	False	NA	-2	True	ATTAAA	-16	NA	129517740	129513066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
ENSMUST00000030588.13	chr4	+	3949	15	FSM	ENSMUSG00000028796.18	ENSMUST00000030588.13	3949	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	86.1216806475061	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	False	NA	20	True	AATAAA	-21	NA	128548494	128646674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_128548610_128598790_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUST00000030606.14	chr4	-	5111	5	FSM	ENSMUSG00000059713.13	ENSMUST00000030606.14	5111	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	34.9311823447189	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGAGCAGTCTCTTC	NA	False	NA	-4	True	AATAAA	-22	NA	135161164	135139618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152757_135160922
ENSMUST00000030610.3	chr4	-	2321	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	9.35414346693485	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCGTGACACTTTTA	NA	False	NA	0	True	AATAAA	-24	NA	129271909	129247420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
ENSMUST00000030622.3	chr4	+	1369	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTCTGTAACTTAAACA	NA	False	NA	NA	False	AATAAA	-24	NA	134658208	134664859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ENSMUST00000030622.3-0	chr4	+	865	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	112	392	0	-392	multi-exon	FALSE	canonical	3	670	junction_5	39.6628149390445	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCCACATGCATATGTT	NA	False	NA	11	True	AATAAA	-17	NA	134658320	134664467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ENSMUST00000030623.8	chr4	+	3465	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTCTTCCCAGTGT	NA	False	NA	26	True	AATAAA	-22	NA	126915116	126925029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ENSMUST00000030623.8-0	chr4	+	2511	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	0	954	0	-954	multi-exon	FALSE	canonical	3	697	junction_1	123.17016233199	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATCTTCAACTTTGCT	NA	False	NA	11	True	AATAAA	-19	NA	126915116	126924075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ENSMUST00000030626.12	chr4	-	1204	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_1	61.5938759582116	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	-20	True	ATTAAA	-19	NA	134642335	134625159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ENSMUST00000030628.15	chr4	-	3826	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_8	24.8628236529965	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134580656	134530069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
ENSMUST00000030636.11	chr4	+	1060	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	251.409029273016	343	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTCTGTTCAGGTAGT	NA	False	NA	11	True	AATAAA	-27	NA	134195630	134201154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
ENSMUST00000030637.14	chr4	-	3681	7	FSM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	31.1216252074913	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTCTGCCTTGCAC	NA	False	NA	-1	True	NA	NA	NA	126647202	126637542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
ENSMUST00000030642.3	chr4	+	859	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	3349	junction_3	129.102439945959	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5380	False	NA	19	True	AATAAA	-21	NA	126571422	126603507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ENSMUST00000030643.3	chr4	-	4126	11	FSM	ENSMUSG00000028838.12	ENSMUST00000030643.3	4126	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.57951365983839	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGGGCTATAAATACGCT	7023	False	NA	0	True	AATAAA	-23	NA	134099869	134083682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134085142_134085288_134085458_134086395_134086557_134087059_134087147_134087842_134087933_134089611_134089719_134089893_134090027_134090393_134090514_134091891_134092000_134092208_134092300_134098268
ENSMUST00000030644.8	chr4	-	1994	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_2	27	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTTATCTCTTGCTTT	7668	False	NA	7	True	NA	NA	NA	133972903	133970599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133972242_133972335_133972399_133972614
ENSMUST00000030644.8-0	chr4	-	634	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	0	1360	0	-1342	multi-exon	FALSE	canonical	3	614	junction_2	27	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCACACCTCCGATACTAA	7668	False	NA	-29	True	AATAAA	-15	NA	133972903	133971959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133972242_133972335_133972399_133972614
ENSMUST00000030651.9	chr4	-	743	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1437	junction_2	42.5	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGTGGTGTCCGGGTC	9226	False	NA	-5	True	ATTAAA	-22	NA	133856100	133854716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133855118_133855228_133855397_133855926
ENSMUST00000030660.9	chr4	+	1336	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	21.2882009573378	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGTTTTCCTTCT	7625	False	NA	45	True	AATAAA	-25	NA	126156117	126169676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ENSMUST00000030661.14	chr4	+	1367	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	14.7394029729837	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTTTTTAGTGTGTGT	NA	False	NA	41	True	NA	NA	NA	133311672	133319046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
ENSMUST00000030662.3	chr4	+	2004	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	9.82626864865578	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGCCTTAGTGAAGCCT	NA	False	NA	13	True	AATAAA	-20	NA	133302055	133311554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
ENSMUST00000030665.7	chr4	-	1316	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	0	0	0	0	multi-exon	FALSE	canonical	3	2323	junction_4	508.87928082108	2666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCCTCGTCTAGAC	4460	False	NA	NA	False	ATTAAA	-19	NA	133273307	133259852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ENSMUST00000030669.8	chr4	+	4676	12	FSM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	11.7922793063796	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGGGCTGCTTCCTGGG	157	False	NA	22	True	AATAAA	-23	NA	133097016	133151013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ENSMUST00000030674.8	chr4	-	1951	15	FSM	ENSMUSG00000028860.14	ENSMUST00000030674.8	1951	15	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_9	2.42541812090709	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCTTAACTGGGTATGA	NA	False	NA	4	True	AATAAA	-20	NA	132990424	132980400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132980620_132980765_132980972_132982843_132982944_132983044_132983124_132983352_132983512_132983798_132983896_132984175_132984343_132984446_132984561_132984727_132984823_132985044_132985133_132986171_132986218_132986292_132986369_132986598_132986748_132988163_132988393_132990297
ENSMUST00000030675.8	chr4	+	937	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_7	51.9186962510439	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAATGATGGAAGATGG	NA	False	NA	27	True	AATAAA	-12	NA	125940717	125949325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ENSMUST00000030677.7	chr4	+	4334	29	FSM	ENSMUSG00000028862.7	ENSMUST00000030677.7	4334	29	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	5.06727697273075	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTCTTGGCAACTTCA	8449	False	NA	18	True	ATTAAA	-18	NA	132968128	132980240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132968743_132970128_132970269_132970363_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ENSMUST00000030684.8	chr4	+	2366	16	FSM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_4	51.4673575083168	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGGAACTGTGTTCGCTT	NA	False	NA	24	True	ATTAAA	-18	NA	124923784	124949169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ENSMUST00000030696.11	chr4	-	3053	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	24.0676130931175	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTGATTCAGTTG	NA	False	NA	0	True	AATAAA	-19	NA	132649869	132626523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ENSMUST00000030698.5	chr4	-	2934	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTGCACTTGATTGT	6093	False	NA	-4	True	AATAAA	-14	NA	132611820	132580811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUST00000030698.5-0	chr4	-	2281	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	90	563	90	-563	multi-exon	FALSE	canonical	3	172	junction_5	25.18928343562	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTATTTTTATGAG	6183	False	NA	-11	True	AATAAA	-13	NA	132611730	132581374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUST00000030702.14	chr4	-	2037	7	FSM	ENSMUSG00000028882.14	ENSMUST00000030702.14	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_6	9.9121138007995	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTATGGTCTTGAGTCT	NA	False	NA	-6	True	ATTAAA	-16	NA	132570480	132554239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132570367
ENSMUST00000030709.9	chr4	-	2006	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	8.56666534317997	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCGTGAGGGATCACAGC	NA	False	NA	-1	True	AATAAA	-31	NA	132484563	132460276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
ENSMUST00000030723.3	chr4	+	7631	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTCACAGTCCAGCCAC	319	False	NA	NA	False	NA	NA	NA	124696341	124743593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ENSMUST00000030723.3-0	chr4	+	2709	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	33	4889	0	-4468	multi-exon	FALSE	canonical	3	78	junction_5	11.1103555298649	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTACTGCCCATCATT	352	False	NA	28	True	CATAAA	-32	NA	124696374	124738704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ENSMUST00000030724.9	chr4	-	3475	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	0	0	0	0	multi-exon	TRUE	canonical	3	666	junction_4	59.9637750728526	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	-31	True	AATAAA	-22	NA	132237812	132219342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ENSMUST00000030726.13	chr4	-	2278	11	FSM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	136.55039362814	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	5481	False	NA	-14	True	AATAAA	-17	NA	132073016	132059233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235_132067318_132072956
ENSMUST00000030730.14	chr4	-	1130	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_8	39.2324801663112	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCTTCTTCAACTGTAT	2316	False	NA	0	True	AATAAA	-17	NA	132056849	132039073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ENSMUST00000030731.11	chr4	+	3787	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGACTTGGGTGGAATTG	NA	False	NA	NA	False	NA	NA	NA	132001685	132023077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ENSMUST00000030731.11-0	chr4	+	1309	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	41	2437	0	617	multi-exon	FALSE	canonical	3	439	junction_3	32.7987804651331	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTGTCCATAGGACCT	NA	False	NA	26	True	AATAAA	-22	NA	132001726	132020640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ENSMUST00000030734.5	chr4	+	1820	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	0	0	0	0	multi-exon	FALSE	canonical	3	1027	junction_12	104.342509913266	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	False	NA	51	True	AATAAA	-38	NA	124608568	124626253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUST00000030738.8	chr4	-	1603	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTTGTGTGTGTGTG	NA	False	NA	NA	False	TATAAA	-16	NA	124587393	124571952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ENSMUST00000030738.8-0	chr4	-	966	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	0	637	0	0	multi-exon	FALSE	canonical	3	1259	junction_4	134.593264834372	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTTGTAATCATGACT	NA	False	NA	NA	False	NA	NA	NA	124587393	124572589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ENSMUST00000030742.11	chr4	+	1337	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	17.6243378301319	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATGCGTGTGGAGGAA	NA	False	NA	33	True	AATAAA	-33	NA	131570780	131595097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ENSMUST00000030747.11	chr4	+	3897	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	15.5060472074607	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	39	True	AATAAA	-21	NA	141520922	141543287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUST00000030751.5	chr4	-	4154	20	FSM	ENSMUSG00000028917.15	ENSMUST00000030751.5	4154	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	9.60176576558575	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCGCTGACCCTCTT	6530	False	NA	-1	True	AATAAA	-20	NA	141392210	141353044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171_141391439_141392141
ENSMUST00000030757.10	chr4	+	5934	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	13.4283650402542	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTTTTATTAGTATA	NA	False	NA	15	True	AATAAA	-19	NA	140875223	140931373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ENSMUST00000030760.15	chr4	-	1906	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_3	45.6883855200484	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8485	False	NA	-10	True	AATAAA	-22	NA	140805668	140793822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUST00000030760.15-0	chr4	-	1149	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	15	742	0	93	multi-exon	FALSE	canonical	3	362	junction_3	45.6883855200484	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGATTCAATTTGTGGC	8500	False	NA	-6	True	ATTAAA	-19	NA	140805653	140794564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUST00000030763.13	chr5	-	4851	15	FSM	ENSMUSG00000028926.16	ENSMUST00000030763.13	4851	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.34846888896766	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCATCCTGGTATGTAG	NA	False	NA	-5	True	AATAAA	-18	NA	5430197	4853390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_4856732_4938836_4938981_4944027_4944168_4972126_4972176_4999531_4999596_5060832_5060927_5086425_5086547_5142957_5143082_5153791_5153855_5185318_5185414_5245277_5245358_5277163_5277259_5298982_5299229_5423457_5423490_5430034
ENSMUST00000030765.7	chr4	+	4774	16	FSM	ENSMUSG00000028927.7	ENSMUST00000030765.7	4774	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	9.97463449622759	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGCTCTGGGTGACATTC	NA	False	NA	8	True	AATAAA	-33	NA	140633654	140679897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140633861_140644883_140645068_140646618_140646692_140651624_140651687_140653446_140653565_140654403_140654530_140659375_140659555_140660057_140660162_140660483_140660596_140661926_140662035_140663830_140663983_140665230_140665376_140671752_140671847_140673988_140674075_140676522_140676652_140677001
ENSMUST00000030771.12	chr5	-	2133	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_11	91.8299209136107	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATAGTCATCATTTAA	NA	False	NA	3	True	AATAAA	-30	NA	21990249	21962264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ENSMUST00000030773.12	chr5	-	3247	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	2.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATATTTCATATTTTC	NA	False	NA	-12	True	AATACA	-11	NA	25910823	25894809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_25897827_25903248_25903331_25910675
ENSMUST00000030779.10	chr4	+	1425	9	FSM	ENSMUSG00000028937.15	ENSMUST00000030779.10	1425	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	152.008172066504	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAAGCCTAGGTGGT	NA	False	NA	12	True	AATAAA	-17	NA	152270662	152356304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUST00000030784.14	chr5	-	3331	16	FSM	ENSMUSG00000028944.15	ENSMUST00000030784.14	3331	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	63.6806616381038	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATGTATATGAGTAC	NA	False	NA	-5	True	AATAAA	-23	NA	25305640	25067741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
ENSMUST00000030787.9	chr5	-	1163	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	196	425	0	419	multi-exon	FALSE	canonical	3	1533	junction_1	69.8271919433531	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047426	25008245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
ENSMUST00000030791.12	chr5	-	1735	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_12	43.1762376776856	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	6985	False	NA	0	True	ATTAAA	-17	NA	24807010	24797619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
ENSMUST00000030795.10	chr5	-	2569	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_13	122.348082348837	2319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782465	24770342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ENSMUST00000030797.4	chr4	-	2120	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	30.2685893295343	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCGTGTTTCTTGGAGTG	NA	False	NA	3	True	AATAAA	-22	NA	151142410	151131756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
ENSMUST00000030800.13	chr5	-	1893	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	1073	junction_9	118.54686003725	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650285	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ENSMUST00000030805.14	chr4	-	908	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	5402	junction_3	199.85446093484	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994383	150981589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUST00000030806.6	chr4	-	6991	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	18.6480561989715	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCATGATCTTTAAG	7309	False	NA	NA	False	AATAAA	-16	NA	149392080	149318190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ENSMUST00000030811.2	chr4	+	3043	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	19.3275853524323	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGTCTTGTCTAAA	3781	False	NA	NA	False	AATAAA	-28	NA	150939529	150953344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
ENSMUST00000030813.10	chr4	-	1110	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_3	40.8923892674419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGTCTGCTTGAAGGG	NA	False	NA	NA	False	NA	NA	NA	149222086	149212654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ENSMUST00000030814.11	chr5	-	2059	12	FSM	ENSMUSG00000028969.11	ENSMUST00000030814.11	2059	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	52.4982486917657	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAAGCCAACCATGCC	NA	False	NA	-11	True	TATAAA	-5	NA	24628528	24623238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24624461_24624597_24624679_24624780_24624842_24625256_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ENSMUST00000030814.11-0	chr5	-	1115	12	FSM	ENSMUSG00000028969.11	ENSMUST00000030814.11	2059	12	0	944	0	191	multi-exon	FALSE	canonical	0	0	junction_3	52.4982486917657	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-9	True	CATAAA	-18	NA	24628528	24624182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24624461_24624597_24624679_24624780_24624842_24625256_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ENSMUST00000030816.4	chr4	+	2457	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2.13541565040626	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTGCCTTTGTTTGTC	NA	False	NA	6	True	AATAAA	-16	NA	149188602	149205104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
ENSMUST00000030830.4	chr4	-	4745	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	7.96868872525461	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAGTTGATAAACAGTG	NA	False	NA	0	True	ATTAAA	-26	NA	150093480	150063931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
ENSMUST00000030834.7	chr5	+	4132	26	FSM	ENSMUSG00000028978.13	ENSMUST00000030834.7	4132	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	2.97079114042034	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGACAGTTTTGCGCTTG	NA	False	NA	NA	False	AAAAAG	-13	NA	24569807	24589472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24570000_24571757_24571861_24572195_24572345_24572478_24572642_24573816_24573909_24573987_24574130_24574795_24574936_24575018_24575194_24575785_24575888_24576602_24576798_24576899_24576974_24577124_24577270_24577631_24577737_24582278_24582347_24582590_24582708_24582808_24582984_24584706_24584840_24584946_24585026_24585170_24585359_24585867_24586041_24586361_24586573_24586651_24586740_24587522_24587645_24588257_24588407_24588527_24588723_24588815
ENSMUST00000030839.13	chr4	+	2674	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	7.98044484975618	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGAGCTGAGCTGGT	NA	False	NA	9	True	AATAAA	-16	NA	149602692	149650894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ENSMUST00000030841.10	chr5	+	2966	11	FSM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	4.51220566907139	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGATTTGCTTTGTTTA	NA	False	NA	6	True	ATTAAA	-13	NA	24305602	24365783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUST00000030842.8	chr4	+	1817	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	14.9517743280039	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569750	149581125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ENSMUST00000030845.13	chr4	-	1238	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAAATCAATTTTTCT	1652	False	NA	34	True	ACTAAA	-20	NA	149569655	149553015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
ENSMUST00000030845.13-0	chr4	-	2225	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	0	-987	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4.60298815988049	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGGACGACTACCCTCT	1652	False	NA	-7	True	AATAAA	-17	NA	149569655	149552028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
ENSMUST00000030849.13	chr5	-	5659	11	FSM	ENSMUSG00000028995.15	ENSMUST00000030849.13	5659	11	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	17.5795335546766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235688	24165928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24170357_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ENSMUST00000030851.7	chr5	-	417	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	0	708	0	-708	multi-exon	FALSE	canonical	3	3790	junction_2	61.5	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCTTTCATACTTT	NA	False	NA	-29	True	AATAAA	-18	NA	24049159	24044649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24044827_24046707_24046757_24048968
ENSMUST00000030852.13	chr5	+	3298	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	0	0	0	0	multi-exon	TRUE	canonical	2	56	junction_5	10.4591040315534	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGTATTTCTTTGTGTG	NA	False	NA	4	True	NA	NA	NA	23992708	24025367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ENSMUST00000030858.14	chr4	-	1346	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236370	148230243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
ENSMUST00000030858.14-0	chr4	-	1168	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	178	0	-89	0	multi-exon	FALSE	canonical	3	164	junction_5	252.506158340742	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236192	148230243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
ENSMUST00000030860.9	chr4	+	1535	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGAACATGTGTATCG	NA	False	NA	30	True	AATAAA	-38	NA	148224638	148230156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ENSMUST00000030860.9-0	chr4	+	1197	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	335	3	-207	0	multi-exon	FALSE	canonical	3	623	junction_4	29.3730405338651	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	27	True	AATAAA	-35	NA	148224973	148230153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ENSMUST00000030865.9	chr4	-	3996	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTGTGTGATTAAT	NA	False	NA	-3	True	AATAAA	-18	NA	148172488	148161517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ENSMUST00000030865.9-0	chr4	-	1136	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	0	2860	0	596	multi-exon	FALSE	canonical	3	1081	junction_4	44.285296657017	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACCCTGCTGTCTTG	NA	False	NA	-25	True	NA	NA	NA	148172488	148164377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ENSMUST00000030872.12	chr5	-	2103	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_10	41.6678895284064	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755373	22691486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ENSMUST00000030879.12	chr4	-	5181	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	0	-1875	0	0	multi-exon	FALSE	canonical	3	89	junction_12	12.7042811811837	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7422	False	NA	-1	True	AATAAA	-22	NA	148123270	148088715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ENSMUST00000030882.12	chr5	+	1615	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_5	33.8430815184827	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTTAGTCTGTTATATGT	NA	False	NA	16	True	AATAAA	-18	NA	21942138	21962150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ENSMUST00000030886.15	chr4	-	1813	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	26.1538657058192	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGCCTCTCTTTTTTTT	NA	False	NA	1	True	AATAAA	-29	NA	147953176	147945234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUST00000030893.3	chr4	-	2093	7	FSM	ENSMUSG00000029027.10	ENSMUST00000030893.3	2093	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	5.79271573232759	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTCAAAATTTTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	154059583	154048905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
ENSMUST00000030894.15	chr4	+	3395	7	FSM	ENSMUSG00000029028.15	ENSMUST00000030894.15	3395	7	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_6	37.5972812255827	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGCATCAGCAGCCTT	NA	False	NA	15	True	AATAAA	-17	NA	154096259	154105969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087
ENSMUST00000030895.12	chr4	+	1598	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	6.78354840224641	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAACAGTGGTGGTTGTTT	NA	False	NA	25	True	TATAAA	-30	NA	154226828	154241273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
ENSMUST00000030896.15	chr4	-	1724	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_1	33.0891052899423	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	-3	True	AGTAAA	-16	NA	154245123	154241941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
ENSMUST00000030898.12	chr4	-	2860	15	FSM	ENSMUSG00000029032.13	ENSMUST00000030898.12	2860	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_12	5.46976849116476	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACAGGTAGGTGGAGAC	NA	False	NA	34	True	AATATA	-4	NA	154384511	154362942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154384281
ENSMUST00000030901.9	chr4	+	2368	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	75.0722308430354	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCACTGTGTACCGTCA	9960	False	NA	21	True	AATAAA	-21	NA	155954002	155973560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ENSMUST00000030903.12	chr4	-	2413	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_5	53.203759265676	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ENSMUST00000030905.9	chr4	+	1472	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	0	0	0	0	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGAATTGCCACAAAAT	NA	False	NA	117	True	AATAAA	-33	NA	155789256	155818336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUST00000030905.9-0	chr4	+	1052	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	324	96	0	-96	multi-exon	FALSE	canonical	3	1510	junction_4	100.903419169025	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAAGTGTCTGTTGTTG	NA	False	NA	21	True	AATAAA	-21	NA	155789580	155818240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUST00000030914.4	chr4	-	1596	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	0	0	0	0	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	False	NA	-13	True	ATTAAA	-22	NA	155170830	155158566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ENSMUST00000030914.4-0	chr4	-	1321	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	2	273	0	-273	multi-exon	FALSE	canonical	3	1097	junction_6	206.502959354635	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGACTATTTTGAC	NA	False	NA	-33	True	TATAAA	-18	NA	155170828	155158839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ENSMUST00000030915.11	chr4	+	1659	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_9	6.41927570616156	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGCACCTTTTGTGGG	NA	False	NA	17	True	AATAAA	-18	NA	155171033	155229962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
ENSMUST00000030917.6	chr4	-	5522	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_6	29.4528813908287	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGTGCCTGCAGCCCC	NA	False	NA	-21	True	AATAAA	-15	NA	155307049	155238531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ENSMUST00000030920.6	chr5	+	3955	7	FSM	ENSMUSG00000048271.15	ENSMUST00000030920.6	3955	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	25.4994553318737	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTATTTTGTATGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	28522199	28560577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469
ENSMUST00000030922.15	chr4	-	2262	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	0	379	0	0	multi-exon	FALSE	canonical	3	142	junction_14	28.8196876191202	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAATAAAGTGTACCG	NA	False	NA	-36	True	NA	NA	NA	155445818	155346556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
ENSMUST00000030931.11	chr4	+	2508	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	27.1993100856585	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAATCTTTTATATAT	NA	False	NA	NA	False	NA	NA	NA	155048579	155065328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ENSMUST00000030935.10	chr4	-	883	7	FSM	ENSMUSG00000029059.10	ENSMUST00000030935.10	883	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	8.17856276425687	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCGTCCTTCCCACAGCA	NA	False	NA	-6	True	ATTAAA	-45	NA	154983567	154980855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154981055_154981496_154981616_154981805_154981882_154981962_154982027_154982584_154982637_154982932_154983138_154983399
ENSMUST00000030940.14	chr4	+	3131	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575826	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUST00000030940.14-0	chr4	+	1675	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	0	1456	0	160	multi-exon	FALSE	canonical	3	1763	junction_1	785.626496329864	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCCTGAGTGTGATTG	NA	False	NA	5	True	AATAAA	-15	NA	155575826	155642270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUST00000030942.13	chr4	+	764	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	False	NA	22	True	AATAAA	-18	NA	155887977	155893288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ENSMUST00000030942.13-0	chr4	+	638	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	126	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	66.873013989202	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTATTTCCTGGC	NA	False	NA	22	True	AATAAA	-18	NA	155888103	155893288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ENSMUST00000030944.11	chr4	+	2442	11	FSM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_8	247.410205933385	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTCTGTGCCATCCT	4625	False	NA	NA	False	ATTAAA	-15	NA	155896945	155909000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ENSMUST00000030948.16	chr4	+	3358	15	FSM	ENSMUSG00000029071.17	ENSMUST00000030948.16	3358	15	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	19.2953679542474	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931858	155943760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ENSMUST00000030950.8	chr4	-	2089	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	0	573	0	0	multi-exon	FALSE	canonical	3	76	junction_1	2.5	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATACCTACATGATTG	NA	False	NA	-43	True	NA	NA	NA	155953897	155949752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155951343_155951569_155951795_155953623
ENSMUST00000030964.6	chr5	+	3270	8	FSM	ENSMUSG00000029084.6	ENSMUST00000030964.6	3270	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	17.0353773551587	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGCTTGGATTCAATTC	NA	False	NA	NA	False	ATTAAA	-18	NA	44025894	44069717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_44026463_44057674_44057805_44058762_44058899_44060936_44061023_44063505_44063580_44064854_44064948_44065264_44065352_44067621
ENSMUST00000030968.7	chr5	+	1616	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	8.92941067484299	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTAGTTCTACATATAT	NA	False	NA	13	True	ATTAAA	-21	NA	48529670	48546187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ENSMUST00000030971.7	chr5	-	4480	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_6	33.7942668086734	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216348	50117297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ENSMUST00000030980.12	chr5	-	3790	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	7.3	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAATAGAAATATTTAT	7626	False	NA	NA	False	TATAAA	-21	NA	35732414	35713546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ENSMUST00000030980.12-0	chr5	-	2783	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	0	1007	0	-1007	multi-exon	FALSE	canonical	3	72	junction_3	7.3	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCAAGGGCTTCACAG	7626	False	NA	-7	True	AATAAA	-14	NA	35732414	35714553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ENSMUST00000030984.14	chr5	+	5472	17	FSM	ENSMUSG00000029101.17	ENSMUST00000030984.14	5472	17	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_15	4.70206071845101	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTGTGTCTTGCCT	8631	False	NA	NA	False	TTTAAA	-16	NA	35106788	35190939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ENSMUST00000030986.15	chr5	-	2981	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGGAAAATGACCTGTG	NA	False	NA	-7	True	AATAAA	-21	NA	35263110	35248844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ENSMUST00000030986.15-0	chr5	-	1432	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	70	1479	0	89	multi-exon	FALSE	canonical	3	809	junction_2	73.9092107153867	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263040	35250323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ENSMUST00000030992.13	chr5	+	2895	8	FSM	ENSMUSG00000029110.14	ENSMUST00000030992.13	2895	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1003.41470052242	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493723	34510780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
ENSMUST00000030993.8	chr5	-	2580	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_5	32.3241395863834	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCCACTTTAAATGCT	NA	False	NA	0	True	AATAAA	-29	NA	34093757	34055259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUST00000031002.10	chr5	-	3330	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_7	26.3739138796905	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCATGTTCAAGCCAGA	949	False	NA	-13	True	AATAAA	-21	NA	36987997	36964264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ENSMUST00000031003.11	chr5	+	4088	9	FSM	ENSMUSG00000029120.11	ENSMUST00000031003.11	4088	9	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_3	14.0890028036054	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	NA	False	NA	9	True	AATAAA	-21	NA	37025856	37112422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
ENSMUST00000031004.11	chr5	+	2906	14	FSM	ENSMUSG00000029121.17	ENSMUST00000031004.11	2906	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.40069023605034	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAAAGAAATTAA	NA	False	NA	NA	False	NA	NA	NA	37403107	37449445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_37403441_37422575_37422665_37426026_37426212_37430690_37430856_37433620_37433683_37435428_37435510_37436206_37436276_37437002_37437124_37437810_37437968_37440195_37440338_37441371_37441543_37443711_37443892_37446148_37446315_37448460
ENSMUST00000031005.11	chr5	-	4325	21	FSM	ENSMUSG00000029122.12	ENSMUST00000031005.11	4325	21	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	2.64764045897474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTCTTGCCTGTTTCGG	NA	False	NA	NA	False	AATAAA	-17	NA	37494238	37456514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
ENSMUST00000031011.12	chr5	-	1635	7	FSM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_3	45.374980869295	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	-4	True	AATAAA	-14	NA	41865497	41782318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUST00000031017.11	chr5	+	1755	4	FSM	ENSMUSG00000029135.11	ENSMUST00000031017.11	6537	4	653	4129	281	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGGGGAAGCAGATGAC	NA	False	NA	NA	False	AGTAAA	-16	NA	32293797	32311057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32294150_32304168_32304421_32307764_32307873_32310014
ENSMUST00000031018.10	chr5	-	1042	8	FSM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7.57816411992848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGTGTGGCTACTCATC	NA	False	NA	-31	True	AATAAA	-23	NA	31854971	31781782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31782001_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ENSMUST00000031024.14	chr5	+	478	4	FSM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	1273	junction_1	440.713814926043	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTCTTAGAGGTAT	NA	False	NA	19	True	AATAAA	-22	NA	31771282	31779988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31771367_31771946_31771966_31773724_31773832_31779720
ENSMUST00000031029.15	chr5	+	2018	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	0	0	0	0	multi-exon	TRUE	canonical	3	351	junction_8	24.4791664857432	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTCCCTCTCACTG	NA	False	NA	21	True	ATTAAA	-21	NA	31350570	31356244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUST00000031032.11	chr5	-	2307	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_8	38.6382398699386	932	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTCATAGTGTCCTGC	NA	False	NA	-5	True	ACTAAA	-18	NA	31378031	31360011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ENSMUST00000031034.12	chr5	+	2203	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_13	30.9676692663879	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	False	NA	33	True	AATAAA	-21	NA	31398207	31408910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUST00000031037.14	chr5	-	2089	8	FSM	ENSMUSG00000029151.15	ENSMUST00000031037.14	2089	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	6.02037357305871	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCAGTCCAATTCCTC	3744	False	NA	0	True	AATAAA	-19	NA	31250959	31243449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31244263_31245300_31245436_31245648_31245755_31245951_31246151_31246662_31246817_31246897_31247045_31247399_31247582_31250606
ENSMUST00000031038.11	chr5	+	1523	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	106.002063659157	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTCTTTTTTTTAAAG	NA	False	NA	14	True	AATACA	-7	NA	73450134	73471412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUST00000031051.8	chr5	-	1442	6	FSM	ENSMUSG00000029161.9	ENSMUST00000031051.9	1442	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	4.51663591625449	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTTGGTCCAG	5296	False	NA	1	True	AATAAA	-25	NA	31102935	31090486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093325_31102701
ENSMUST00000031055.8	chr5	+	3852	8	FSM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	4.70345075232981	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTATTCTGCTCTAGTAC	NA	False	NA	22	True	AATAAA	-27	NA	31070745	31078621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
ENSMUST00000031058.15	chr5	+	2021	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	5.53774924194538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTCTGTCTTTTGTAAG	2206	False	NA	60	True	NA	NA	NA	30971984	31023450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUST00000031061.12	chr5	-	3010	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_10	48.0023421519305	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347856	52307544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ENSMUST00000031069.13	chr5	-	5252	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.2493902257647	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAAGTCTTCTTGCACT	NA	False	NA	24	True	AATAAA	-41	NA	52827050	52797428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ENSMUST00000031072.14	chr5	+	2685	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	114	1055	0	0	multi-exon	FALSE	canonical	3	314	junction_6	48.5716418249863	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTTCCATCCTTGTG	NA	False	NA	21	True	AATAAA	-21	NA	52991467	53024084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUST00000031073.10	chr5	+	993	7	FSM	ENSMUSG00000029177.10	ENSMUST00000031073.10	993	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	786.892358161733	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9263	False	NA	40	True	AATAAA	-24	NA	30824317	30831753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30824458_30826342_30826397_30827081_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUST00000031080.15	chr5	+	2938	14	FSM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	7.03667484678724	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTTCTCCTTTCGTGA	NA	False	NA	NA	False	ATTAAA	-13	NA	65127413	65199229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65127488_65137050_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUST00000031081.11	chr5	+	3139	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	14.8099065943487	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	7	True	AATAAA	-16	NA	52898915	52926682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ENSMUST00000031091.13	chr5	-	6677	9	FSM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_5	5.18260311040697	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36853281	36757828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ENSMUST00000031094.15	chr5	-	4590	14	FSM	ENSMUSG00000029192.18	ENSMUST00000031094.15	4590	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	25.6258929704419	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTACTTTGGT	8925	False	NA	0	True	AATAAA	-22	NA	36739741	36647947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739698
ENSMUST00000031097.8	chr5	-	3791	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTGTTTGCTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	36641629	36631013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36634307_36641131
ENSMUST00000031099.4	chr5	+	3528	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	0	0	0	0	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTTAAGCACAGCTT	NA	False	NA	NA	False	AATAAA	-33	NA	36622341	36631424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
ENSMUST00000031099.4-0	chr5	+	956	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	189	2383	189	-2383	multi-exon	FALSE	canonical	3	2567	junction_1	75.3126815350509	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTGCACAGTCTACC	NA	False	NA	15	True	AATAAA	-16	NA	36622530	36629041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
ENSMUST00000031101.10	chr5	+	1506	11	FSM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	4	1486	0	0	multi-exon	FALSE	canonical	3	30	junction_1	106.686643962588	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGTGTGTGTATGTGT	6933	False	NA	48	True	AAAAAG	-11	NA	65548886	65566550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65549017_65549677_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUST00000031103.14	chr5	-	2550	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_10	43.2746370854342	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	-13	True	AATAAA	-22	NA	65593292	65570563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ENSMUST00000031104.7	chr5	-	4146	32	FSM	ENSMUSG00000029202.13	ENSMUST00000031104.7	4146	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.823584157033	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACCCCACTCATCCTCA	3058	False	NA	2	True	AAAAAG	-40	NA	65855199	65772602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ENSMUST00000031117.13	chr5	-	1894	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_4	11.5998084275369	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATCTCATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-45	NA	69749683	69732343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUST00000031131.11	chr5	+	1021	9	FSM	ENSMUSG00000029223.13	ENSMUST00000031131.11	1177	9	151	5	0	0	multi-exon	FALSE	canonical	3	449	junction_4	35.1227757302865	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTGGTTTTTATTTT	NA	False	NA	28	True	AATAAA	-17	NA	66833584	66844572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_66833666_66833778_66833791_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUST00000031143.13	chr5	+	1747	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	4.14728827066554	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGGACTGGGTAACAT	NA	False	NA	15	True	AATAAA	-27	NA	76288117	76303326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ENSMUST00000031144.14	chr5	+	1897	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_3	75.4808585006821	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	536	False	NA	7	True	AATAAA	-15	NA	76331726	76357092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ENSMUST00000031145.7	chr5	-	1181	6	FSM	ENSMUSG00000029235.15	ENSMUST00000031145.7	1181	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	18.0554700852678	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGCACCATGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	76479003	76459973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_76460446_76465647_76465857_76466973_76467118_76472152_76472244_76472839_76472961_76478859
ENSMUST00000031160.16	chr5	+	2482	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	0	0	0	0	multi-exon	FALSE	canonical	3	3017	junction_4	215.03720608304	2362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUST00000031167.6	chr5	+	4145	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_9	39.992360381564	908	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTTATCTTTGATT	NA	False	NA	16	True	AATAAA	-16	NA	77457993	77497171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUST00000031170.10	chr5	-	3192	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_10	17.8879399334224	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATCTTGTCTGTGGTG	NA	False	NA	-6	True	ATTAAA	-17	NA	86213442	86159882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ENSMUST00000031190.5	chr5	+	3085	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	9	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTATATTTAATGAT	NA	False	NA	NA	False	AATAAA	-21	NA	108416762	108428392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108417676_108423434_108423599_108426384
ENSMUST00000031198.11	chr5	-	2721	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTTGATCAATATGTTT	NA	False	NA	NA	False	NA	NA	NA	108134951	108055918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ENSMUST00000031198.11-0	chr5	-	1758	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	52	911	0	739	multi-exon	FALSE	canonical	3	143	junction_2	18.0883249639097	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATTTACTGTGTACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	108134899	108056829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ENSMUST00000031221.12	chr5	+	2961	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_8	37.8828119074671	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112187	107132298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUST00000031224.15	chr5	-	6087	17	FSM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	3.80788655293195	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCATATCTGGTCAT	277	False	NA	-5	True	AATAAA	-20	NA	107437495	107254435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_107257624_107266284_107266393_107269225_107269274_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107414059_107414217_107437120
ENSMUST00000031227.11	chr5	+	2667	12	FSM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	8.12708968677346	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTCTTTTGTCATGT	NA	False	NA	NA	False	AATACA	-16	NA	106024433	106063684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ENSMUST00000031243.15	chr5	+	1410	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	0	0	0	0	multi-exon	FALSE	canonical	3	5474	junction_3	341.773032223953	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTGGTGGTGTCAATT	NA	False	NA	31	True	AATAAA	-18	NA	104582983	104588916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000031250.14	chr5	+	1488	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	16.2468207250979	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTCAAGTTCTCCC	NA	False	NA	20	True	AATAAA	-23	NA	104194734	104213245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUST00000031254.9	chr5	-	3193	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_9	11.7473401244707	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTAATGTCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	104059125	104009915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
ENSMUST00000031255.15	chr5	+	2884	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.86939558874797	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGCATTATTCTTC	NA	False	NA	5	True	AATAAA	-16	NA	100994084	101046965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ENSMUST00000031262.9	chr5	-	1743	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	48.3206880009887	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822150	100802588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
ENSMUST00000031268.8	chr5	+	1420	7	FSM	ENSMUSG00000029326.14	ENSMUST00000031268.8	1420	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	172.72618021983	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	False	NA	15	True	AATAAA	-15	NA	100187902	100216619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657_100215801_100216154
ENSMUST00000031273.9	chr5	+	3924	13	FSM	ENSMUSG00000029330.9	ENSMUST00000031273.9	3924	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	11.4561361529774	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGCTGCTGTTTTCTA	NA	False	NA	10	True	AATAAA	-19	NA	101912995	101971724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101956531_101956615_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ENSMUST00000031273.9-0	chr5	+	2087	13	FSM	ENSMUSG00000029330.9	ENSMUST00000031273.9	3924	13	0	1837	0	574	multi-exon	TRUE	canonical	3	31	junction_6	11.4561361529774	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAAGAGCG	NA	False	NA	NA	False	NA	NA	NA	101912995	101969887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101956531_101956615_101957751_101957840_101960360_101960430_101962265_101962419_101963714_101963835_101965718_101965823_101969299
ENSMUST00000031276.15	chr5	-	2990	14	FSM	ENSMUSG00000089809.10	ENSMUST00000031276.15	2990	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.0897042626471	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGAGTTGTGGCGTCTT	NA	False	NA	-1	True	AATACA	-15	NA	99400786	99365284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_99366658_99369219_99369293_99370176_99370301_99370798_99370895_99375846_99375943_99377179_99377260_99379949_99380053_99380160_99380257_99381773_99381849_99382334_99382551_99388681_99388820_99389267_99389391_99390922_99391106_99400572
ENSMUST00000031288.14	chr5	+	3560	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAAGTATATGGGTGTT	NA	False	NA	14	True	AATAAA	-16	NA	112474223	112485939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUST00000031288.14-0	chr5	+	2812	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	63	685	0	115	multi-exon	FALSE	canonical	3	92	junction_4	15.3503464486856	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGAATAACGTCTCTA	NA	False	NA	25	True	AATAAA	-17	NA	112474286	112485254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUST00000031289.7	chr5	-	1110	7	FSM	ENSMUSG00000029346.13	ENSMUST00000031289.7	1110	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	42.3848112207926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490906	112485257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_112485608_112485841_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ENSMUST00000031304.14	chr5	+	1031	8	FSM	ENSMUSG00000029359.14	ENSMUST00000031304.14	1031	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	14.2499552451857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATCTGTCCCTCACAT	NA	False	NA	17	True	AATAAA	-22	NA	118165807	118199943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
ENSMUST00000031309.16	chr5	+	2421	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_4	52.4760361974873	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495368	117516666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ENSMUST00000031311.10	chr5	+	3078	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	17.3052657368277	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGACTTTAAAATTTTC	NA	False	NA	27	True	AATAAA	-24	NA	88912854	88931140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUST00000031331.13	chr5	+	2810	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	8.90998064543581	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATTTCAGTTTTTAAT	NA	False	NA	NA	False	AATAAA	-28	NA	93415115	93424090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ENSMUST00000031333.4	chr5	+	2672	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	79.1684210331928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTGTTGTTGTTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	124717202	124735743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ENSMUST00000031333.4-0	chr5	+	1808	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	26	838	0	255	multi-exon	FALSE	canonical	3	570	junction_1	79.1684210331928	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	20	True	AATAAA	-21	NA	124717228	124734905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ENSMUST00000031334.15	chr5	-	1517	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	56	440	0	-440	multi-exon	FALSE	canonical	0	0	junction_4	226.339761199839	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717138	124708715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
ENSMUST00000031341.11	chr5	-	1315	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	0	0	0	0	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAGGTCTTAAGTGCT	4254	False	NA	2	True	AATAAA	-38	NA	124492734	124483479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
ENSMUST00000031341.11-1	chr5	-	1216	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	99	0	99	0	multi-exon	FALSE	canonical	3	1091	junction_3	81.9308651648856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAGGTCTTAAGTGCT	4353	False	NA	2	True	AATAAA	-38	NA	124492635	124483479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
ENSMUST00000031344.13	chr5	-	7747	22	FSM	ENSMUSG00000038126.18	ENSMUST00000031344.13	7747	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_19	11.2106201672855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124466035	124389021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124458907_124459062_124462936_124463201_124465848
ENSMUST00000031345.15	chr5	-	1967	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTATGGATGAATG	1335	False	NA	NA	False	TATAAA	-18	NA	92110927	92096762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUST00000031345.15-1	chr5	-	1363	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	218	386	-115	-289	multi-exon	FALSE	canonical	3	292	junction_5	17.5926120857592	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATTTTCTTTTCTTTTC	1553	False	NA	-5	True	ATTAAA	-19	NA	92110709	92097148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUST00000031347.8	chr5	-	1391	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.55902608401044	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACGCATGTGTATCCAA	NA	False	NA	48	True	AATAAA	-24	NA	124616429	124601327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ENSMUST00000031349.9	chr5	+	1115	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGAGGTGGGGTTTGT	2220	False	NA	10	True	AATAAA	-24	NA	124621196	124629187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124621310_124628185
ENSMUST00000031351.11	chr5	+	1192	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	46.874833333037	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254161	124256259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUST00000031355.10	chr5	+	3898	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	100.480471444838	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATCTCTGTCATTGTTC	NA	False	NA	10	True	AATAAA	-18	NA	92285796	92350654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ENSMUST00000031364.5	chr5	-	5020	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_13	31.6626205793221	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGAAATCTCTCCAT	NA	False	NA	-6	True	AATAAA	-17	NA	92457883	92431868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ENSMUST00000031366.12	chr5	+	6961	64	FSM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_8	72.5550989140863	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887788	123959656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ENSMUST00000031367.15	chr5	-	2732	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	13.4346490805814	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGAGCTTCCTGATGGTT	NA	False	NA	-5	True	TATAAA	-18	NA	127694480	127672727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
ENSMUST00000031376.12	chr5	-	4286	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	0	0	0	0	multi-exon	FALSE	non_canonical	2	263	junction_13	50.4357344906314	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTATCCAAGTTCCT	6397	False	NA	NA	False	AATAAA	-13	NA	123859107	123836364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ENSMUST00000031377.9	chr5	-	4698	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_7	16.1496104397404	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCACTGTGAACTGTCTC	NA	False	NA	-11	True	ATTAAA	-16	NA	92653496	92589172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ENSMUST00000031377.9-0	chr5	-	2021	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	0	2677	0	-2677	multi-exon	FALSE	canonical	3	99	junction_7	16.1496104397404	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGGGCCCTGG	NA	False	NA	-6	True	AATAAA	-14	NA	92653496	92591849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ENSMUST00000031378.14	chr5	-	2939	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	6.30555310817378	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGCCTCCTCATTG	NA	False	NA	NA	False	ATTAAA	-27	NA	129085638	129061620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ENSMUST00000031383.14	chr5	+	2377	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	0	0	0	0	multi-exon	FALSE	canonical	3	11744	junction_1	1335.32560531962	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAGTCATCTCTAGT	342	False	NA	21	True	AATATA	-23	NA	129097132	129101387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUST00000031385.7	chr5	-	681	5	FSM	ENSMUSG00000029433.17	ENSMUST00000031385.7	681	5	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_2	56.3493566955294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATAACATTATTTCCTT	8965	False	NA	NA	False	NA	NA	NA	123662196	123655648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUST00000031388.13	chr5	-	4235	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	30.3840007240653	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCCCTGCCGGCCTGAC	10000	False	NA	NA	False	AAAAAG	-3	NA	123711101	123666721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUST00000031388.13-0	chr5	-	3731	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	59	445	0	-445	multi-exon	FALSE	canonical	3	140	junction_1	30.3840007240653	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTGTCTCAATTTAC	9992	False	NA	-13	True	ATTAAA	-18	NA	123711042	123667166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUST00000031390.10	chr5	+	3557	10	FSM	ENSMUSG00000029436.10	ENSMUST00000031390.10	6422	10	0	2865	0	-2865	multi-exon	TRUE	canonical	3	158	junction_6	22.9879195327556	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGGGTTGATCTCCTC	NA	False	NA	34	True	AATAAA	-40	NA	129661232	129685298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682578_129682837_129683339
ENSMUST00000031391.9	chr5	+	3756	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	52	910	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.53431361950185	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGGCTGAGCCCATT	NA	False	NA	NA	False	AATAAA	-21	NA	123482562	123512145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
ENSMUST00000031399.13	chr5	-	1733	8	FSM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	460.03695503731	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGTAGTTTTAAGTGA	8757	False	NA	-2	True	ATTAAA	-22	NA	129864513	129842621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085_129856313_129856425_129856509_129864018
ENSMUST00000031410.14	chr5	-	2234	14	FSM	ENSMUSG00000029454.16	ENSMUST00000031410.14	2234	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.8494703910793	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTATATAGATTTAAGTT	NA	False	NA	4	True	AATAAA	-30	NA	121683968	121663100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ENSMUST00000031410.14-0	chr5	-	2044	14	FSM	ENSMUSG00000029454.16	ENSMUST00000031410.14	2234	14	176	14	176	0	multi-exon	FALSE	canonical	0	0	junction_9	50.8494703910793	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGCTTAAAGTTGCTA	NA	False	NA	-10	True	AATAAA	-16	NA	121683792	121663114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ENSMUST00000031411.15	chr5	-	1946	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	242	1679	0	172	multi-exon	TRUE	canonical	3	476	junction_10	93.9036148872283	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGGGTCAGTTCTCTA	NA	False	NA	-26	True	AATAAA	-16	NA	121731645	121705768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ENSMUST00000031414.15	chr5	+	3744	12	FSM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_6	24.4408545656822	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTCTGAAATTACCCA	907	False	NA	20	True	AATAAA	-30	NA	121798625	121825319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ENSMUST00000031419.6	chr5	-	1388	7	FSM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	23.7235232534199	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTTTAAATTATCTTT	NA	False	NA	-20	True	ATTAAA	-21	NA	122510427	122502642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
ENSMUST00000031420.11	chr5	+	1592	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	35.5154464814327	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8039	False	NA	NA	False	AATAAA	-42	NA	122510513	122520965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ENSMUST00000031422.10	chr5	+	2751	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_7	29.6310647800581	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACCAGTGTGAGCTTCA	NA	False	NA	NA	False	GATAAA	-20	NA	122560506	122582975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ENSMUST00000031423.10	chr5	-	4486	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	0	0	0	0	multi-exon	FALSE	canonical	3	1036	junction_17	105.58760524925	2747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAGAAAAATAACTGTC	7277	False	NA	-28	True	AATAAA	-13	NA	122640288	122594402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ENSMUST00000031426.14	chr5	-	2950	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTTTTTACTTCATT	1243	False	NA	NA	False	ATTAAA	-20	NA	122752581	122688266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ENSMUST00000031426.14-0	chr5	-	2652	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	0	298	0	-294	multi-exon	FALSE	canonical	3	41	junction_3	9.90510530540242	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACATAGTTGTGTCAA	1243	False	NA	-7	True	AATAAA	-33	NA	122752581	122688564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ENSMUST00000031429.14	chr5	+	1972	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	36	694	0	0	multi-exon	FALSE	canonical	3	87	junction_5	9.63207451716048	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	15	True	ATTAAA	-20	NA	122845642	122867107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUST00000031434.8	chr5	+	1933	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	161	2346	52	-2346	multi-exon	FALSE	canonical	3	187	junction_1	16.3389106124001	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	675	False	NA	9	True	AATAAA	-16	NA	122988271	123007008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUST00000031435.14	chr5	-	3532	12	FSM	ENSMUSG00000029475.18	ENSMUST00000031435.14	3532	12	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_11	40.2726246663991	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8594	False	NA	NA	False	TATAAA	-21	NA	123038418	123008730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ENSMUST00000031445.5	chr5	+	3239	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	14.7470013373196	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTACGCGTGTGTTTCTC	NA	False	NA	10	True	AATAAA	-27	NA	125552877	125594474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUST00000031447.12	chr5	+	1595	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.64991582276861	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGCTTCTGTTACTT	NA	False	NA	NA	False	AATACA	-15	NA	96941243	96993825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
ENSMUST00000031472.12	chr5	-	1041	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_4	29.6004645233821	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTCTCAGCACAGTT	NA	False	NA	4	True	AATAAA	-28	NA	110434052	110422147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
ENSMUST00000031474.11	chr5	+	5215	13	FSM	ENSMUSG00000029501.15	ENSMUST00000031474.11	5215	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	61.1323700396661	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGATGTCTGGGAGATG	NA	False	NA	15	True	ATTAAA	-17	NA	110378906	110404513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ENSMUST00000031477.9	chr5	+	4805	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	18.4207288514263	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTTACTTTTTATC	NA	False	NA	80	True	AAGAAA	-11	NA	110324744	110371067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ENSMUST00000031478.6	chr5	+	4846	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_7	18.2382195693885	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTACCCTGTGCTC	NA	False	NA	NA	False	NA	NA	NA	110801316	110808362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ENSMUST00000031478.6-0	chr5	+	2554	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	0	2292	0	333	multi-exon	TRUE	canonical	3	94	junction_7	18.2382195693885	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCGATAGCTCCAACACA	NA	False	NA	13	True	AATAAA	-24	NA	110801316	110806070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ENSMUST00000031483.15	chr5	-	1814	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_5	100.055184773204	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928462	110921532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ENSMUST00000031486.14	chr5	-	2089	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	10.0788557551606	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGACTCGGCACATTTT	NA	False	NA	0	True	AATAAA	-25	NA	116162521	116151644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
ENSMUST00000031490.11	chr5	-	5213	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	0	0	0	0	multi-exon	TRUE	canonical	3	530	junction_12	186.450389110485	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957963	110932353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ENSMUST00000031492.15	chr5	+	2820	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGGGTCTGTCTGCTC	NA	False	NA	25	True	AATAAA	-21	NA	115769966	115785795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
ENSMUST00000031492.15-0	chr5	+	2242	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	0	578	0	-578	multi-exon	FALSE	canonical	3	206	junction_5	16.4438438328756	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	17	True	AATAAA	-19	NA	115769966	115785217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
ENSMUST00000031495.11	chr5	+	557	4	FSM	ENSMUSG00000029522.13	ENSMUST00000031495.11	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	2118	junction_3	35.2640830811685	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGATTGTTATCTC	NA	False	NA	30	True	AATAAA	-21	NA	115604324	115612781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115604380_115608840_115609001_115610051_115610180_115612567
ENSMUST00000031508.5	chr5	+	1088	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCACTTTATTGAGCAT	2414	False	NA	44	True	AATAAA	-36	NA	115479283	115481628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115479477_115480733
ENSMUST00000031513.14	chr5	+	1162	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_1	69.0700127889569	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGCAGTTGTCTTTG	134	False	NA	39	True	AATATA	-18	NA	115465235	115471139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ENSMUST00000031519.14	chr5	-	1370	7	FSM	ENSMUSG00000029544.17	ENSMUST00000031519.14	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	80.5826008239716	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	9907	False	NA	-1	True	AATAAA	-20	NA	115324367	115306747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115324070
ENSMUST00000031524.11	chr5	-	1870	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	13.7822573362984	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9774	False	NA	-4	True	AATAAA	-18	NA	115257405	115248357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
ENSMUST00000031530.9	chr5	+	3204	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_3	39.4320935279881	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCCTGACTTCACT	1483	False	NA	28	True	AATAAA	-16	NA	115149195	115236849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ENSMUST00000031531.14	chr5	-	883	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	27	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGACATCATGGGCAT	7313	False	NA	-12	True	AATAAA	-31	NA	139812640	139809346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139809829_139811882_139812120_139812476
ENSMUST00000031534.9	chr5	-	2640	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_17	17.902078903461	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCCAAGGCTCCAAGC	NA	False	NA	1	True	AATAAA	-27	NA	140307307	139994443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ENSMUST00000031535.12	chr5	-	3191	10	FSM	ENSMUSG00000029556.13	ENSMUST00000031535.12	3191	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	4.10960933531265	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAAGCTTCCTGACTGT	NA	False	NA	1	True	AGTAAA	-15	NA	115109126	115087038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115088245_115088752_115088898_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
ENSMUST00000031536.8	chr5	-	1443	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTACTTGTCTGTTT	3901	False	NA	-5	True	AAAACA	-37	NA	140317653	140313428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_140314536_140316734_140317025_140317607
ENSMUST00000031538.9	chr5	+	1329	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	46	1232	0	767	multi-exon	FALSE	canonical	3	243	junction_3	24.1909073827337	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCTGGTCAGTGCTGA	NA	False	NA	28	True	AATAAA	-30	NA	115080262	115086610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ENSMUST00000031539.12	chr5	-	2627	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_10	18.7160359050735	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGTTTCCACGCTGCA	7720	False	NA	-12	True	AATAAA	-14	NA	140375017	140326057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ENSMUST00000031554.9	chr6	-	4587	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_4	32.9194091684526	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTGTCTCAGACTCAG	NA	False	NA	NA	False	AATAAA	-26	NA	13608099	13580685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
ENSMUST00000031554.9-0	chr6	-	3920	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	56	611	0	-611	multi-exon	FALSE	canonical	3	155	junction_4	32.9194091684526	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCCTTTGCTTTTAGA	-13	True	NA	NA	False	ATTAAA	-15	NA	13608043	13581296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
ENSMUST00000031555.3	chr5	+	2305	8	FSM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	5.13888735674427	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGGGGCCCTAGTCTTG	NA	False	NA	7	True	AATAAA	-18	NA	140593074	140601300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140593600_140597604_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
ENSMUST00000031556.14	chr6	+	6002	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	9.57127865021179	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTCATCCTCTTGAAA	25	True	NA	18	True	AATAAA	-19	NA	13069837	13089268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ENSMUST00000031560.14	chr5	-	3020	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_1	19.5604032422647	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTGGCTCATCTCTC	NA	False	NA	2	True	AATAAA	-36	NA	114582121	114569094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ENSMUST00000031562.11	chr5	-	2213	3	FSM	ENSMUSG00000043059.17	ENSMUST00000031562.11	2213	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	7	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGTCTCTGCTGAAT	NA	False	NA	-19	True	AATAAA	-14	NA	31359386	31356326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31357492_31357578_31358167_31358926
ENSMUST00000031565.15	chr5	+	2675	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	0	0	0	0	multi-exon	FALSE	canonical	3	2634	junction_2	132.012310032057	5495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTGTGTCTCAGGGG	NA	False	NA	18	True	AATAAA	-18	NA	142946097	142958940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ENSMUST00000031587.13	chr5	+	1985	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	117.255656106172	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCCGACTATTCTTCA	NA	False	NA	23	True	AATAAA	-19	NA	114268446	114277384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUST00000031588.12	chr5	+	3394	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	0	1210	0	-1210	multi-exon	FALSE	canonical	3	37	junction_5	7.25095779113966	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGCGGTGCTTTAGTCC	NA	False	NA	12	True	AATAAA	-23	NA	114238375	114261571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ENSMUST00000031590.12	chr5	+	4010	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_16	11.5488606136917	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGATGTCACTCTGTCAC	NA	False	NA	21	True	AATAAA	-31	NA	120254529	120337046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ENSMUST00000031597.7-1	chr5	-	2715	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	13	1480	0	485	multi-exon	FALSE	canonical	3	256	junction_2	57.4604427353187	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCATCCTCTGGTTATT	NA	False	NA	-7	True	NA	NA	NA	120641677	120622826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ENSMUST00000031598.11	chr5	+	4322	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTATTCCTCCTGCC	NA	False	NA	16	True	GATAAA	-26	NA	120750803	120766657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUST00000031598.11-0	chr5	+	2969	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	388	965	0	0	multi-exon	FALSE	canonical	3	468	junction_5	36.9159410499192	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGAGTGTGGCTTCCT	NA	False	NA	27	True	AATAAA	-18	NA	120751191	120765692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUST00000031599.9	chr5	-	1573	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	1.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTAGTGTGTTACTTTTT	6315	False	NA	NA	False	ATTAAA	-20	NA	120750654	120747122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120748028_120749442_120749795_120750338
ENSMUST00000031607.7	chr5	-	4035	10	FSM	ENSMUSG00000029603.16	ENSMUST00000031607.7	4035	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	46.8325095485741	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCCTTTTTCTGCCAAG	NA	False	NA	-18	True	AATAAA	-16	NA	120849992	120818266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120848119_120849041_120849549
ENSMUST00000031613.11	chr5	-	1185	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	88.5023540176569	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846657	143839521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ENSMUST00000031621.11	chr5	-	1769	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_9	71.895615943093	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCCTGTTGAGTCCT	NA	False	NA	1	True	AATAAA	-22	NA	143951671	143924726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ENSMUST00000031625.15	chr5	+	1632	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_5	31.8084545015595	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTTTCTTTATACTCT	NA	False	NA	22	True	ATTAAA	-23	NA	145020639	145045571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUST00000031627.9	chr5	-	1225	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	240	888	0	427	multi-exon	FALSE	canonical	3	415	junction_5	28.7708185493566	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCCTTGTTTGGCAGTT	NA	False	NA	-25	True	ATTAAA	-12	NA	145076808	145066466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUST00000031628.10	chr5	-	3087	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	16.4350045634311	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTGCGTCTCATATATA	NA	False	NA	2	True	AATAAA	-30	NA	145103918	145084323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
ENSMUST00000031632.9	chr5	-	1967	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTTGTTTCTTTGTCT	1591	False	NA	NA	False	NA	NA	NA	145138678	145131755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_145133010_145135486_145135611_145138089
ENSMUST00000031637.8	chr6	-	468	4	FSM	ENSMUSG00000029632.8	ENSMUST00000031637.8	468	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4249.68315158776	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCGTGTCACTATTTAATG	2	True	NA	-12	True	AATAAA	-14	NA	11907449	11900371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_11900591_11905200_11905262_11906018_11906080_11907322
ENSMUST00000031640.15	chr5	+	2973	13	FSM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	19.7545704978761	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168097	146239684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ENSMUST00000031651.15	chr5	+	5048	19	FSM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	15.1677858764904	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTGTTTTTATTACC	NA	False	NA	NA	False	AATAAA	-23	NA	147366970	147485312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ENSMUST00000031654.10	chr5	+	1579	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	0	0	0	0	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGTTTGTGGACTCTG	NA	False	NA	NA	False	AATAAA	-26	NA	147797270	147813266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ENSMUST00000031654.10-0	chr5	+	713	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	192	674	0	171	multi-exon	FALSE	canonical	3	2983	junction_1	193.876661823954	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTGTGTGGTTGGGTTT	NA	False	NA	34	True	AATAAA	-24	NA	147797462	147812592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ENSMUST00000031680.10	chr6	+	2587	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	78	1135	0	0	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCGTGATGTGGCAGTTA	-11	True	NA	22	True	AATATA	-21	NA	21949647	21974902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ENSMUST00000031680.10-1	chr6	+	2292	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	0	1508	0	0	multi-exon	FALSE	canonical	3	104	junction_1	20.5043837280255	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAACTTGTATTTAT	NA	False	NA	8	True	AATAAA	-8	NA	21949569	21974529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ENSMUST00000031692.12	chr5	+	1758	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	29.6445610525776	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACAGCTTCTTTCTACA	8669	False	NA	29	True	ATTAAA	-24	NA	135197136	135210709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ENSMUST00000031695.15	chr6	-	4352	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	20.1893536300695	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTCTCATTTGTTAT	-9	True	NA	NA	False	AATAAA	-27	NA	24665008	24613803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ENSMUST00000031697.9	chr6	+	3161	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	65.0983905600956	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATATTCCCATTGTCTT	NA	False	NA	19	True	AATAAA	-20	NA	47431253	47503073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUST00000031707.14	chr6	-	3371	24	FSM	ENSMUSG00000029695.14	ENSMUST00000031707.14	3701	24	0	330	0	-330	multi-exon	TRUE	canonical	0	0	junction_6	3.81024387829681	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTCTCTTGAGTTTTTG	1	True	NA	NA	False	AGTAAA	-17	NA	23132985	23072501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_23073090_23074526_23074704_23075160_23075250_23075739_23075856_23077077_23077174_23078826_23078995_23091197_23091339_23092263_23092373_23092462_23092574_23093894_23094022_23094188_23094311_23096824_23096893_23097141_23097202_23107138_23107251_23107615_23107739_23109425_23109575_23113424_23113553_23113674_23113754_23114839_23114987_23115086_23115155_23118668_23118754_23120875_23121053_23122511_23122737_23132879
ENSMUST00000031726.15	chr5	-	1860	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTCCTTGCTTACTG	1532	False	NA	-5	True	CATAAA	-22	NA	137531772	137526388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ENSMUST00000031726.15-0	chr5	-	1588	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	268	4	-11	0	multi-exon	FALSE	canonical	3	634	junction_9	47.0030206541801	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTAGTCTCCTTGCTT	1800	False	NA	-9	True	CATAAA	-18	NA	137531504	137526392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ENSMUST00000031727.10	chr5	+	5440	24	FSM	ENSMUSG00000029714.12	ENSMUST00000031727.10	5440	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	18.481994507709	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTGCCAGCTTTTCC	6706	False	NA	29	True	AATAAA	-24	NA	137517139	137526197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ENSMUST00000031728.5	chr5	-	881	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1639	False	NA	-33	True	AATAAA	-19	NA	137500780	137499700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137500342_137500540
ENSMUST00000031728.5-0	chr5	-	788	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	93	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	1732	False	NA	-33	True	AATAAA	-19	NA	137500687	137499700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137500342_137500540
ENSMUST00000031731.14	chr5	-	1626	9	FSM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_8	116.165560731225	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGTGTCTGAGGTTCTGT	4023	False	NA	-2	True	AATAAA	-21	NA	137609749	137603364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
ENSMUST00000031734.16	chr5	+	3078	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	20.6479805391719	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGGTGTGTGCCTGCC	2184	False	NA	25	True	AATAAA	-27	NA	137627382	137639356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ENSMUST00000031736.16	chr5	-	2893	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	17.5678142969908	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGTGTCTTGTTTTG	1764	False	NA	NA	False	NA	NA	NA	137682988	137648724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ENSMUST00000031739.6	chr5	+	956	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_1	53.8970211504206	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCGAACTGTTCTTGGGA	NA	False	NA	5	True	AATAAA	-18	NA	137777165	137778372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
ENSMUST00000031740.16	chr5	-	3128	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	12.2474487139159	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTCCAGCACTTTCTA	2726	False	NA	-6	True	AATAAA	-29	NA	137784925	137780167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
ENSMUST00000031750.14	chr6	+	5469	15	FSM	ENSMUSG00000033542.14	ENSMUST00000031750.14	5469	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	2.0861545523586	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTCAGGTTACTTA	6824	False	NA	NA	False	AATAAA	-20	NA	43242515	43266254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_43242678_43249238_43252360_43252873_43252932_43253470_43253533_43253737_43253992_43256376_43256538_43257094_43257248_43257531_43257662_43257884_43257960_43258356_43258447_43260107_43260266_43260826_43260989_43262292_43262364_43264473_43264579_43265547
ENSMUST00000031766.12	chr6	-	2001	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	0	0	0	0	multi-exon	FALSE	canonical	3	8132	junction_7	319.487761505924	9209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1567	False	NA	-9	True	AATAAA	-17	NA	7693254	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ENSMUST00000031779.17	chr6	+	3229	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_2	154.523730647863	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTCTTTTATTCTC	NA	False	NA	118	True	AATAAA	-22	NA	29348104	29376674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUST00000031788.9	chr6	-	1825	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_5	85.7178570684555	848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGAGCTTTTTGTTTT	2839	False	NA	-1	True	AATAAA	-20	NA	52617374	52523212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
ENSMUST00000031793.8	chr6	-	1676	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_8	16.5486970786222	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCCAGATCATAT	1204	False	NA	0	True	AATAAA	-26	NA	56900917	56859384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
ENSMUST00000031795.8	chr6	+	3009	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_6	57.9369602069757	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56809043	56856343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ENSMUST00000031805.11	chr6	+	6670	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	11.3247025960459	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691911	56738897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ENSMUST00000031810.15	chr6	-	3447	11	FSM	ENSMUSG00000029790.17	ENSMUST00000031810.15	3447	11	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_8	9.18095855561934	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTTTGCTATTAATG	NA	False	NA	0	True	ATTAAA	-16	NA	30693748	30653455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUST00000031822.13	chr6	+	2554	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	-62	3225	-62	-60	multi-exon	FALSE	canonical	3	51	junction_1	36.1961323900773	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	16	True	ATTAAA	-23	NA	58573593	58669436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUST00000031838.9	chr6	-	4345	15	FSM	ENSMUSG00000029814.11	ENSMUST00000031838.9	4345	15	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_14	48.9016610043012	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49191891	49062156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
ENSMUST00000031840.10	chr6	+	3701	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCTCTGAGTAATTCA	NA	False	NA	NA	False	TATAAA	-13	NA	49013548	49035116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
ENSMUST00000031840.10-0	chr6	+	2249	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	50	1402	0	-1402	multi-exon	FALSE	canonical	3	59	junction_4	6.96347614342147	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTGTGTGATTATTA	NA	False	NA	NA	False	ATTAAA	-11	NA	49013598	49033714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
ENSMUST00000031841.9	chr6	-	1799	8	FSM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_7	100.796420409392	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	4593	False	NA	-8	True	AATAAA	-11	NA	49240964	49220861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ENSMUST00000031850.10	chr6	-	3400	9	FSM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	12.2212673238089	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTTGGATTTTTTT	9664	False	NA	-3	True	NA	NA	NA	38331538	38292602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUST00000031859.14	chr6	+	4042	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_9	112.54974208964	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847745	37943231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ENSMUST00000031862.14	chr6	+	1889	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_5	643.207773584866	2785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447509	51460684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUST00000031866.9	chr6	-	3960	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_3	9.97775303139718	745	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCTGCTCATAGAAAAG	4148	False	NA	NA	False	ATTAAA	-15	NA	35516823	35485840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ENSMUST00000031868.5	chr6	-	3427	16	FSM	ENSMUSG00000029843.5	ENSMUST00000031868.5	3427	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	3.05213950460256	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGAGTGAGGTCTACTC	NA	False	NA	NA	False	AATAAA	-16	NA	35285066	35244891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251976_35252575_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173_35260255_35261564_35261605_35264281_35264337_35264688_35264853_35266728_35266866_35278659_35278789_35284292
ENSMUST00000031879.5	chr6	-	4497	8	FSM	ENSMUSG00000029851.6	ENSMUST00000031879.5	4497	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.16057691494799	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTTTCTTGTGATTT	NA	False	NA	NA	False	TATAAA	-1	NA	42622188	42599949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_42601550_42603050_42603389_42604207_42604448_42604852_42605067_42605955_42606054_42606334_42607330_42619402_42620040_42621813
ENSMUST00000031895.13	chr6	+	3529	11	FSM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	18.1	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241918	42259442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
ENSMUST00000031971.13	chr6	+	1063	6	FSM	ENSMUSG00000029911.15	ENSMUST00000031971.13	1063	6	0	0	0	0	multi-exon	FALSE	canonical	3	1713	junction_1	476.592320542411	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACATGTTTTATTATTT	NA	False	NA	NA	False	NA	NA	NA	40448348	40455521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856
ENSMUST00000031973.13	chr6	+	1488	11	FSM	ENSMUSG00000029913.15	ENSMUST00000031973.13	1488	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	49.012753442344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATTCAAAATAGA	NA	False	NA	NA	False	NA	NA	NA	65756008	65913282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUST00000031976.14	chr6	+	2155	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	23.473389188611	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGGCTCTTGACTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	65755971	65913360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUST00000031977.12	chr6	+	2531	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_15	44.4424221762146	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	8	True	NA	NA	NA	40302105	40373696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ENSMUST00000031978.9	chr6	-	624	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	95	388	0	0	multi-exon	FALSE	canonical	3	1131	junction_2	267.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGTTTAAGATTGGAA	NA	False	NA	-18	True	AATAAA	-12	NA	39787827	39779125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39779479_39782304_39782546_39787797
ENSMUST00000031984.9	chr6	+	5168	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	41.9367603834104	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1727	False	NA	28	True	AATAAA	-30	NA	65019592	65093045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ENSMUST00000031985.13	chr6	-	3046	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_3	1193.53149458715	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397396	39374737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUST00000032060.15	chr6	+	948	8	FSM	ENSMUSG00000029993.17	ENSMUST00000032060.15	948	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1005.23440255576	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATACATTTGCTTCCTC	NA	False	NA	18	True	AATAAA	-24	NA	86986817	87005436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ENSMUST00000032065.15	chr6	-	4295	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	86374136	86362987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ENSMUST00000032065.15-0	chr6	-	3663	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	13	619	0	-619	multi-exon	FALSE	canonical	3	165	junction_3	15.4012986465428	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTCTCTTCTTTTT	NA	False	NA	-7	True	ATTAAA	-14	NA	86374123	86363606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ENSMUST00000032066.13	chr6	+	4527	6	FSM	ENSMUSG00000029999.15	ENSMUST00000032066.13	4527	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	2.89827534923789	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGACTGAAGTTTTTC	NA	False	NA	NA	False	AATGAA	-21	NA	86172204	86252701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86172528_86206412_86206467_86240140_86240259_86246911_86247062_86248361_86248472_86248929
ENSMUST00000032071.13	chr6	-	6435	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACTATCTTGTATT	7320	False	NA	2	True	NA	NA	NA	85938649	85919249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ENSMUST00000032071.13-0	chr6	-	4189	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	25	2221	0	-2221	multi-exon	FALSE	canonical	3	240	junction_7	14.8070928949608	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCTGATATTTAAGT	7345	False	NA	-16	True	AATAAA	-16	NA	85938624	85921470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ENSMUST00000032078.9	chr6	+	2441	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	0	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	4610	False	NA	16	True	AGTAAA	-18	NA	85428495	85445457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUST00000032078.9-0	chr6	+	1795	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	578	68	0	-68	multi-exon	FALSE	canonical	3	5555	junction_1	301.70819463638	6051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCCTGCCTTAGAATT	5188	False	NA	38	True	AATAAA	-36	NA	85429073	85445389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUST00000032080.9	chr6	-	1038	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	18.9786063766547	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428265	85423791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
ENSMUST00000032088.14	chr6	+	6199	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_24	71.435679050644	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTCATTTAGGGTCCA	NA	False	NA	NA	False	AAGAAA	-41	NA	83891373	83963631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ENSMUST00000032094.7	chr6	+	2963	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCCCTTGTATCTGTGA	NA	False	NA	42	True	AATAAA	-43	NA	119456628	119459591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_119456600_119459600
ENSMUST00000032105.11	chr6	-	4831	20	FSM	ENSMUSG00000030029.15	ENSMUST00000032105.11	4831	20	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	29.0418553622334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAAGTGTGTGCGGCGGTC	6752	False	NA	NA	False	AATAAA	-16	NA	94677126	94581514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_94581761_94581890_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ENSMUST00000032107.10	chr6	+	4869	4	FSM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	4.18993502999218	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTAGTTAGTATTAACA	NA	False	NA	90	True	ATTAAA	-23	NA	95094720	95106771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_95094956_95095503_95095715_95098719_95099829_95103457
ENSMUST00000032109.5	chr6	-	1038	5	FSM	ENSMUSG00000030034.13	ENSMUST00000032109.5	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	6.41774882649672	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCTCCCACGCCACATT	NA	False	NA	-73	True	NA	NA	NA	83102010	83098808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
ENSMUST00000032111.11	chr6	-	1419	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	18.4390889145858	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTGGGTAGAG	NA	False	NA	-7	True	ATTAAA	-17	NA	83098540	83096024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
ENSMUST00000032114.8	chr6	+	2780	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	15.1070255914995	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCCTTGCTTTAGACA	5173	False	NA	28	True	AATAAA	-17	NA	83092476	83095879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
ENSMUST00000032124.9	chr6	-	1396	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	0	3604	0	519	multi-exon	FALSE	canonical	3	603	junction_3	40.9839907768875	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAAGTCTGCATGTCAG	NA	False	NA	NA	False	ATTAAA	-28	NA	81942939	81938435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUST00000032138.15	chr6	-	2178	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	4630.48644177909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	87828088	87819596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
ENSMUST00000032141.14	chr6	+	1464	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	428.702078630629	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCTCTCACCCAGTA	2964	False	NA	44	True	AATAAA	-30	NA	87890916	87913611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ENSMUST00000032143.8	chr6	+	2284	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	0	1349	0	568	multi-exon	FALSE	canonical	3	2268	junction_5	110.706262438987	3378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACATTTGCTTTTGCTGT	537	False	NA	5	True	AATAAA	-11	NA	88061463	88080937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUST00000032151.3	chr6	-	2515	7	FSM	ENSMUSG00000093661.2	ENSMUST00000032151.3	2515	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.11476292340825	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGGCTCATGTTAATGC	NA	False	NA	NA	False	AATAAA	-17	NA	99643732	99602095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99643588
ENSMUST00000032165.16	chr6	+	1675	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_1	83.5499850388975	769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTTTTTATATTTTAC	NA	False	NA	31	True	AATAAA	-31	NA	88442390	88474554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ENSMUST00000032168.7	chr6	-	3172	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	46.8136802778528	2047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCAGAAAGCTTGTTGT	9095	False	NA	5	True	AATAAA	-39	NA	88495887	88480560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUST00000032169.8	chr6	-	1845	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_10	111.135015794021	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	6964	False	NA	-4	True	AATAAA	-21	NA	88818882	88812895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ENSMUST00000032172.14	chr6	-	1121	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	25.4486277245203	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCACCCAGTCACTTCTG	NA	False	NA	-5	True	AATAAA	-32	NA	89572634	89360132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUST00000032174.12	chr6	+	2373	3	FSM	ENSMUSG00000030087.12	ENSMUST00000032174.12	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_2	6.5	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTTTTGGCCCTGTA	NA	False	NA	28	True	AATAAA	-24	NA	90439557	90452220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_90439708_90443401_90444506_90451101
ENSMUST00000032175.11	chr6	+	3052	23	FSM	ENSMUSG00000030088.16	ENSMUST00000032175.11	3052	23	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	30.2788691558217	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	13	True	AATAAA	-23	NA	90527786	90576151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_90527880_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ENSMUST00000032179.14	chr6	-	7037	40	FSM	ENSMUSG00000030091.18	ENSMUST00000032179.14	7037	40	0	0	0	0	multi-exon	FALSE	non_canonical	3	302	junction_34	44.9993644487226	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093811	90990049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ENSMUST00000032182.5	chr6	-	3634	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	18.0017283120878	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGGCTGCAAATTTATT	369	False	NA	0	True	AATAAA	-16	NA	91492870	91466286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ENSMUST00000032183.6	chr6	+	2903	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_7	13.7209497779825	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTCGTTTGCTGTTGCA	9688	False	NA	NA	False	AATAAA	-30	NA	91450684	91465445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUST00000032185.9	chr6	+	6186	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_10	29.4144383538675	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGTGTGTTTCGGAGT	NA	False	NA	31	True	AATAAA	-25	NA	91661033	91736047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUST00000032191.16	chr6	-	2593	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	15.6204993518133	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTTCACTTTTTCAT	2472	False	NA	NA	False	AATAAA	-15	NA	108162543	108083988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
ENSMUST00000032194.11	chr6	+	3113	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	24.2899156029822	427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATGCTGGATTTGTTTT	NA	False	NA	NA	False	ATTAAA	-25	NA	108637589	108643886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ENSMUST00000032196.9	chr6	+	4443	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGCCTCCTGTGTGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	108760059	108802239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUST00000032196.9-1	chr6	+	2885	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	0	1558	0	-1558	multi-exon	FALSE	canonical	3	458	junction_6	33.5480583972042	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGGTATCATGGTCCC	NA	False	NA	13	True	AATAAA	-17	NA	108760059	108800681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUST00000032203.9	chr6	+	4605	36	FSM	ENSMUSG00000030111.10	ENSMUST00000032203.9	4605	36	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	9.3958740402153	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTCCTTCATTAACTGAG	NA	False	NA	27	True	AATAAA	-25	NA	121613186	121656186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_121613355_121615234_121615419_121616164_121616322_121616473_121616527_121617943_121617965_121618230_121618400_121618947_121619033_121621073_121621195_121621852_121621968_121622110_121622221_121623757_121623920_121624907_121625136_121625563_121625628_121626725_121626869_121631423_121631574_121634338_121634507_121634891_121634968_121636245_121636373_121636878_121637108_121637801_121637929_121638385_121638508_121639351_121639404_121644073_121644158_121645004_121645182_121645487_121645576_121646470_121646628_121646894_121646970_121647860_121648042_121650425_121650650_121651689_121651909_121652077_121652206_121653009_121653101_121653862_121653932_121654940_121655044_121655477_121655520_121656050
ENSMUST00000032211.5	chr6	-	2125	2	FSM	ENSMUSG00000030117.6	ENSMUST00000032211.5	2125	2	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGATTTTGTTAAGGTG	9980	False	NA	NA	False	NA	NA	NA	122587046	122582361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122584095_122586654
ENSMUST00000032214.14	chr6	+	1451	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	1260.71298651795	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGATTCTGGCTGTACT	NA	False	NA	26	True	AATAAA	-16	NA	124908438	124913107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
ENSMUST00000032216.7	chr6	-	1149	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	90.7837402842601	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTCCTGCTTTCCCGC	NA	False	NA	-6	True	AATAAA	-26	NA	124894909	124890643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
ENSMUST00000032220.15	chr6	-	1817	8	FSM	ENSMUSG00000030127.16	ENSMUST00000032220.15	1817	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	625.057254520393	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942411	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ENSMUST00000032237.8	chr6	-	4345	23	FSM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	0	0	0	0	multi-exon	FALSE	canonical	2	285	junction_22	59.9717047606688	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	8285	False	NA	-1	True	ATTAAA	-16	NA	118396435	118360341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ENSMUST00000032264.9	chr6	+	1820	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	5.71547606649408	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTCTTTCTTTTTC	NA	False	NA	34	True	AATAAA	-38	NA	129510122	129519309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
ENSMUST00000032269.12	chr6	+	1617	12	FSM	ENSMUSG00000030166.15	ENSMUST00000032269.12	1617	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	16.8914864369477	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTTTGGCTTCAGGT	NA	False	NA	3	True	ATTAAA	-16	NA	119879736	119899784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899435
ENSMUST00000032272.13	chr6	-	4184	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_7	32.1685611510775	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTGTGTTTTTTTTT	7325	False	NA	0	True	AATAAA	-21	NA	119394665	119330110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUST00000032283.12	chr6	-	2610	12	FSM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_10	52.5397920824409	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334390	120301283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ENSMUST00000032307.12	chr6	-	767	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	0	0	0	0	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAGAATAGGTATTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	131270207	131261350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ENSMUST00000032307.12-0	chr6	-	642	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	0	125	0	0	multi-exon	FALSE	canonical	2	356	junction_3	64.3059095262636	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTTACATGGTTTTTA	NA	False	NA	NA	False	TATAAA	-19	NA	131270207	131261475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ENSMUST00000032309.13	chr6	-	1853	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	0	0	0	0	multi-exon	FALSE	canonical	3	2076	junction_5	391.631661162235	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	4971	False	NA	-9	True	AATAAA	-21	NA	131365401	131341817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ENSMUST00000032322.15	chr6	-	9368	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_12	12.4923116851794	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGCTTTGTGTGATT	NA	False	NA	NA	False	AATAAA	-32	NA	134543876	134423438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ENSMUST00000032326.11	chr6	+	1764	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	0	0	0	0	multi-exon	TRUE	canonical	3	485	junction_5	30.2182146373304	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGTGTGTGCACT	6574	False	NA	20	True	ATTAAA	-20	NA	134988574	135000739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ENSMUST00000032330.16	chr6	+	2721	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	1.6393596310755	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGACTGTTTTCTT	NA	False	NA	7	True	TATAAA	-20	NA	135339928	135360171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ENSMUST00000032335.13	chr6	+	4217	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	44	3798	0	-1255	multi-exon	FALSE	canonical	3	154	junction_2	25.3043716477963	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCTTCCCTGAACAAT	7092	False	NA	6	True	AATAAA	-14	NA	136495843	136584062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ENSMUST00000032336.7	chr6	-	2010	11	FSM	ENSMUSG00000030214.8	ENSMUST00000032336.7	2010	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	4.98497743224581	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTCCTGCGTTTAGC	NA	False	NA	0	True	AATAAA	-17	NA	136638926	136589067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_136589347_136589734_136589842_136590789_136590976_136593924_136594066_136594199_136594401_136611428_136611574_136612489_136612631_136617114_136617254_136618128_136618213_136628728_136628949_136638559
ENSMUST00000032344.12	chr6	-	1193	6	FSM	ENSMUSG00000030220.14	ENSMUST00000032344.12	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	3.18747549010185	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGAGTTGTCTTATGC	5571	False	NA	NA	False	AATAAA	-20	NA	136918754	136900652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918648
ENSMUST00000032347.11	chr6	-	2075	5	FSM	ENSMUSG00000030222.14	ENSMUST00000032347.11	2075	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	19.3697573552174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAATTCTTTTGTGAA	NA	False	NA	-6	True	AATAAA	-20	NA	137147495	137031822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137147435
ENSMUST00000032359.15	chr6	+	3277	8	FSM	ENSMUSG00000030232.19	ENSMUST00000032359.15	5932	8	0	2655	0	0	multi-exon	FALSE	canonical	3	55	junction_1	98.0522559554811	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	140568388	140598552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ENSMUST00000032370.13	chr6	-	2112	16	FSM	ENSMUSG00000030243.17	ENSMUST00000032370.13	2112	16	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	39.7130820875047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCTAAAGTTACATTT	6231	False	NA	NA	False	TTTAAA	-16	NA	142332762	142296067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142296272_142308531_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ENSMUST00000032372.7	chr6	+	2818	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_3	45.9911676303179	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332946	142349584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ENSMUST00000032373.12	chr6	-	1304	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239395.2	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453683	142435974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ENSMUST00000032396.13	chr6	+	2319	19	FSM	ENSMUSG00000030263.14	ENSMUST00000032396.13	2319	19	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13.9594872380979	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTGGAACGCCTGGT	NA	False	NA	17	True	AATAAA	-22	NA	145067464	145120660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145067833_145083185_145083334_145083907_145083990_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ENSMUST00000032398.15	chr6	+	2163	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	0	0	0	0	multi-exon	TRUE	canonical	3	600	junction_1	54.2445309298778	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023185	113045234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUST00000032399.12	chr6	-	4678	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAATTATGTAGTTTT	NA	False	NA	-8	True	AATAAA	-22	NA	145195965	145162424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ENSMUST00000032399.12-0	chr6	-	1905	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	0	2773	0	508	multi-exon	FALSE	canonical	3	862	junction_1	85.6661397519463	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGATGTTCGCTTCAAGG	NA	False	NA	-5	True	AATAAA	-14	NA	145195965	145165197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ENSMUST00000032402.12	chr6	-	2510	11	FSM	ENSMUSG00000030268.18	ENSMUST00000032402.12	7833	11	0	5323	0	0	multi-exon	FALSE	canonical	3	243	junction_10	1157.84085262181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	NA	False	NA	-24	True	AATAAA	-16	NA	144994538	144944883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_144994288
ENSMUST00000032406.15	chr6	+	1549	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	21.4534379529249	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2308	False	NA	14	True	AATAAA	-23	NA	113303932	113311149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ENSMUST00000032409.15	chr6	-	1496	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.10570659096682	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGTTTGCTCAAATAGC	5793	False	NA	NA	False	AATAAA	-20	NA	113320945	113311084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ENSMUST00000032410.14	chr6	-	1711	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	507	630	0	0	multi-exon	FALSE	canonical	3	225	junction_8	58.2875415504892	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354337	113343615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
ENSMUST00000032413.7	chr6	+	6433	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	19.0541655416813	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTGGTTCATAC	NA	False	NA	25	True	AATAAA	-38	NA	143112955	143154272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ENSMUST00000032419.9	chr6	+	1760	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_7	54.6573743554204	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTACTGTAAGACCT	NA	False	NA	33	True	AATAAA	-22	NA	142702411	142721440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ENSMUST00000032422.6	chr6	+	2306	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_1	17.0945085399441	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTTCAGTCTTAACA	1457	False	NA	13	True	AATAAA	-19	NA	113460257	113470299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ENSMUST00000032425.7	chr6	-	1985	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	13.3386044002714	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGCTTCTGTGGGTTCT	NA	False	NA	2	True	ATTAAA	-29	NA	113508613	113491834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
ENSMUST00000032427.15	chr6	-	3059	18	FSM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	56.6296167637544	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479333	146451129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ENSMUST00000032429.9	chr6	+	814	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	35.4902177445498	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTTTTTGTTTGTCCTT	NA	False	NA	36	True	AATAAA	-21	NA	146544044	146552100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
ENSMUST00000032440.6	chr6	-	1353	9	FSM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_8	78.4968152220203	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATCCCACACAGTGAG	-11	True	NA	-10	True	AATAAA	-23	NA	113717704	113705022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ENSMUST00000032441.14	chr6	+	2459	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.07683253612673	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377368	147534110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ENSMUST00000032446.12	chr6	-	1661	13	FSM	ENSMUSG00000030304.12	ENSMUST00000032446.12	1661	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	272.167381097246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTGGCCCTGTGTTAC	NA	False	NA	29	True	AATAAA	-7	NA	148113605	148082713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148108030_148108174_148113467
ENSMUST00000032454.8	chr6	+	4302	16	FSM	ENSMUSG00000030310.11	ENSMUST00000032454.8	4302	16	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	10.8558228103119	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTACTTTCCAGTTG	9910	False	NA	12	True	AATAAA	-20	NA	114259595	114294493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_114259838_114278015_114278066_114278823_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ENSMUST00000032457.17	chr6	+	3761	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTTTTTTTCCTACAG	NA	False	NA	NA	False	TATAAA	-15	NA	114620057	114837575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000032457.17-0	chr6	+	2347	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	30	1384	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.6327313191359	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGTCCTTCCATGTGC	NA	False	NA	12	True	NA	NA	NA	114620087	114836191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000032461.12	chr6	-	1168	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_6	13.6695699587494	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCACTCTGACTGGCT	NA	False	NA	-34	True	AATAAA	-25	NA	115014837	114981341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ENSMUST00000032469.13	chr6	-	3614	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	37.2010533096435	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTTTGGCATTGTGTT	7881	False	NA	NA	False	AATAAA	-21	NA	115830332	115817657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
ENSMUST00000032476.11	chr6	-	3959	10	FSM	ENSMUSG00000003153.11	ENSMUST00000032476.11	3959	10	0	0	0	0	multi-exon	FALSE	canonical	3	8407	junction_1	739.604699221896	21000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATTTTTCCCCCTCTTG	9816	False	NA	-4	True	AATAAA	-29	NA	122719704	122704767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
ENSMUST00000032477.6	chr6	+	2476	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_7	29.158959137102	748	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTTCATCTTTTA	788	False	NA	9	True	ATTAAA	-15	NA	122851432	122865900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ENSMUST00000032479.11	chr6	+	2250	6	FSM	ENSMUSG00000030329.12	ENSMUST00000032479.11	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.6094297678999	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTGCCTGTTTTGCCT	8030	False	NA	16	True	AATAAA	-16	NA	124973656	124980059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124973903_124975880_124975941_124976197_124976704_124977616_124977699_124978389_124978612_124978925
ENSMUST00000032480.14	chr6	+	1629	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	19.3527933964298	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	7107	False	NA	6	True	AATAAA	-16	NA	125016798	125026227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUST00000032485.7	chr6	+	664	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	52	2711	0	0	multi-exon	FALSE	canonical	3	716	junction_1	10	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGCCTCGTTCCTAAG	NA	False	NA	49	True	NA	NA	NA	125169179	125170521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125169397_125169478_125169590_125170185
ENSMUST00000032489.8	chr6	-	2107	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	2.62936879248872	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGGGTTTTATGTGG	NA	False	NA	0	True	AATAAA	-21	NA	125290848	125283533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
ENSMUST00000032491.15	chr6	+	2156	10	FSM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	4.54062594260057	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGACCCTGGAAAGAGTG	3776	False	NA	15	True	AATACA	-20	NA	125326685	125339447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
ENSMUST00000032492.9	chr6	-	1228	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	0	0	0	0	multi-exon	FALSE	canonical	3	5197	junction_4	437.363109779412	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTGATTGCTGGTA	9966	False	NA	-10	True	AATAAA	-15	NA	125471754	125437228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUST00000032497.7	chr6	+	2501	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	14.682034265643	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCGCCATCTCACCTTC	NA	False	NA	NA	False	NA	NA	NA	126916928	126952930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ENSMUST00000032500.9	chr6	-	2724	10	FSM	ENSMUSG00000030350.9	ENSMUST00000032500.9	2724	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	3.18948890986829	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGAGTACCTCTTTCTT	NA	False	NA	2	True	AATAAA	-17	NA	127746435	127665973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_127666872_127667572_127667695_127674647_127674799_127680839_127680956_127688104_127688193_127688744_127688888_127703487_127703552_127706372_127706529_127709597_127709784_127745635
ENSMUST00000032503.12	chr6	-	1405	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	10.9971587239614	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTAGCTCTCTGATTTAT	6166	False	NA	NA	False	NA	NA	NA	128120523	127940869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
ENSMUST00000032508.11	chr6	-	2217	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	0	0	0	0	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	4269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9269	False	NA	-21	True	AATAAA	-16	NA	128415640	128407065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUST00000032508.11-0	chr6	-	1655	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	0	562	0	-562	multi-exon	FALSE	canonical	3	5250	junction_7	195.172162050601	2283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTGGATGATGGCT	9269	False	NA	NA	False	NA	NA	NA	128415640	128407627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUST00000032551.8	chr7	-	4199	4	FSM	ENSMUSG00000030393.9	ENSMUST00000032551.8	4199	4	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_1	5.43650214343336	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATATGTATTAAGACTT	NA	False	NA	-6	True	NA	NA	NA	10229321	10221155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_10224936_10226205_10226333_10228416_10228456_10229068
ENSMUST00000032555.10	chr7	-	1646	9	FSM	ENSMUSG00000002984.18	ENSMUST00000032555.10	1646	9	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_3	135.037899772619	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAAAATAGGATCTG	9894	False	NA	-29	True	NA	NA	NA	19449350	19435253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905
ENSMUST00000032559.17	chr7	+	1990	10	FSM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	11.5662343819316	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTCTGTGTTTTAAAG	NA	False	NA	12	True	AATAAA	-20	NA	19016548	19030085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ENSMUST00000032560.6	chr7	-	1648	5	FSM	ENSMUSG00000030402.6	ENSMUST00000032560.6	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.35607132140714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTCTTCGTTGTTGT	9555	False	NA	1	True	AATAAA	-17	NA	19013989	19010729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19011135_19011874_19011936_19012009_19012116_19012194_19012313_19013031
ENSMUST00000032561.9	chr7	-	2215	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	0	0	0	0	multi-exon	TRUE	canonical	3	1236	junction_9	117.461666323765	1983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ENSMUST00000032566.3	chr7	-	2710	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	5.82380173655205	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATTAAAAACCAAAAA	7204	False	NA	NA	False	NA	NA	NA	18883216	18873626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ENSMUST00000032570.14	chr7	+	2494	5	FSM	ENSMUSG00000030410.17	ENSMUST00000032570.14	2494	5	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_3	47.1858029496161	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	14	True	ACTAAA	-14	NA	18810151	18816701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18815843_18815919_18816200
ENSMUST00000032571.10	chr7	+	2006	4	FSM	ENSMUSG00000030411.17	ENSMUST00000032571.10	8372	4	0	6366	0	-6366	multi-exon	TRUE	canonical	1	1	junction_1	1.4142135623731	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTTTCTTTCCCTCC	NA	False	NA	4	True	AATAGA	-14	NA	18659812	18692878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18660090_18676140_18676285_18684377_18684545_18691460
ENSMUST00000032573.8	chr7	+	694	3	FSM	ENSMUSG00000030413.8	ENSMUST00000032573.8	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	21	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCCCTCCGGTGAATC	NA	False	NA	6	True	AATAAA	-15	NA	18618604	18624366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18618899_18623202_18623325_18624088
ENSMUST00000032585.8	chr7	-	1235	7	FSM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	50	828	0	-828	multi-exon	FALSE	canonical	3	243	junction_2	18.1567251085284	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970797	37962247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
ENSMUST00000032591.15	chr5	+	5265	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	7.11951543294907	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGAAATGATATCTAC	NA	False	NA	NA	False	NA	NA	NA	143220928	143234589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
ENSMUST00000032597.12	chr7	+	545	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	57	504	57	0	multi-exon	FALSE	canonical	3	3938	junction_1	1160.31525888441	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2750	False	NA	17	True	AATAAA	-32	NA	4795929	4797561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUST00000032622.9	chr7	-	3028	4	FSM	ENSMUSG00000063535.8	ENSMUST00000032622.9	3028	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.32049379893857	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGGTTGCGTCTTTC	NA	False	NA	NA	False	NA	NA	NA	7139754	7133673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_7136168_7137165_7137250_7138290_7138418_7139431
ENSMUST00000032627.5	chr7	+	3905	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_19	13.708973353728	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCGGTTCAGTTTGGG	NA	False	NA	NA	False	AATATA	-19	NA	55443901	55481425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ENSMUST00000032635.14	chr7	-	3197	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612224	55581034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ENSMUST00000032635.14-0	chr7	-	1906	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	8	1283	0	680	multi-exon	FALSE	canonical	3	165	junction_5	25.3837218179946	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCCATCAATACCTCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	55612216	55582317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ENSMUST00000032661.14	chr7	+	2362	5	FSM	ENSMUSG00000055102.16	ENSMUST00000032661.14	2362	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	20.1416856295594	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACATTCATCCATTGC	2892	False	NA	7	True	AATAAA	-21	NA	43256648	43267709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43256699_43259209_43259403_43261406_43261534_43261970_43262064_43265810
ENSMUST00000032673.15	chr7	-	2529	5	FSM	ENSMUSG00000074282.11	ENSMUST00000032673.15	2529	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0.866025403784439	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTTTGAATTGTATATC	NA	False	NA	NA	False	NA	NA	NA	24016091	24001220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24003299_24008495_24008623_24011806_24011921_24013774_24013837_24015943
ENSMUST00000032696.7	chr7	+	2324	3	FSM	ENSMUSG00000055305.16	ENSMUST00000032696.7	2324	3	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	1.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCTGATTTAATTATAA	NA	False	NA	NA	False	NA	NA	NA	23970992	23976252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_23971096_23972672_23972800_23974158
ENSMUST00000032701.14	chr7	-	1620	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAAATTCTCTTAAAATA	NA	False	NA	-13	True	AATAAA	-33	NA	35237170	35193036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ENSMUST00000032701.14-0	chr7	-	1539	12	FSM	ENSMUSG00000030491.17	ENSMUST00000032701.14	1620	12	52	29	0	0	multi-exon	FALSE	canonical	3	378	junction_6	48.0311538018523	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAGGCTACATTGCAGA	NA	False	NA	-42	True	AATAAA	-4	NA	35237118	35193065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ENSMUST00000032704.12	chr7	-	1857	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_2	4.92160768674447	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGATCCACAGGCTATAT	NA	False	NA	NA	False	AATAGA	-24	NA	35096261	35091576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
ENSMUST00000032705.13	chr7	+	3508	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	11.3992928531124	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTTGCTTT	NA	False	NA	26	True	AATAAA	-26	NA	35033594	35091714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ENSMUST00000032715.13	chr7	+	2507	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	68.5528506579656	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428093	49508013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUST00000032723.9	chr7	+	955	8	FSM	ENSMUSG00000030512.14	ENSMUST00000032723.9	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	1022.69418095299	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGGACTGTGTGCTGTGT	NA	False	NA	16	True	AATAAA	-16	NA	65710291	65724328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65720337_65720414_65720979_65721074_65724069
ENSMUST00000032726.14	chr7	+	908	5	FSM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_3	21.6333076527839	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACGACAACCCAGAACTTT	NA	False	NA	17	True	AATAAA	-17	NA	65343155	65351650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUST00000032728.9	chr7	+	3192	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	7.60035736651675	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCGGTATGTTCCATTGT	NA	False	NA	11	True	AATAAA	-24	NA	65294645	65341839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
ENSMUST00000032729.8	chr7	-	6102	27	FSM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	23.0143060730422	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTCTTTGGGCTGTGCA	NA	False	NA	NA	False	NA	NA	NA	65020763	64946455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ENSMUST00000032729.8-0	chr7	-	6869	27	FSM	ENSMUSG00000030516.15	ENSMUST00000032729.8	6102	27	-224	-543	0	0	multi-exon	FALSE	canonical	3	136	junction_1	23.0143060730422	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65020987	64945912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ENSMUST00000032735.8	chr7	-	2248	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_4	61.7421250039226	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACGGGCTTATTTCATC	NA	False	NA	-3	True	NA	NA	NA	64042016	64026274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
ENSMUST00000032736.11	chr7	+	5205	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	5.98739416515139	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTCTTGCCTTTGTTA	727	False	NA	5	True	AATAAA	-17	NA	63937417	63990554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ENSMUST00000032738.7	chr7	-	2078	10	FSM	ENSMUSG00000030525.9	ENSMUST00000032738.7	2078	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.31478255248951	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATCTATCTATCCATC	NA	False	NA	NA	False	NA	NA	NA	62862261	62748439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_62749491_62753527_62753638_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855_62861996_62862169
ENSMUST00000032747.7	chr7	+	858	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	40	612	0	0	multi-exon	FALSE	canonical	3	96	junction_1	13.490737563232	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTCTTCCTTCTCTG	NA	False	NA	17	True	AATAAA	-22	NA	79992891	79995850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
ENSMUST00000032748.15	chr7	-	3260	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_19	11.9833679753749	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTGTTTGTTGTTG	NA	False	NA	NA	False	AATAAA	-13	NA	79989967	79975042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
ENSMUST00000032749.12	chr7	+	2574	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	14.9188576657057	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	79919396	79941327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ENSMUST00000032761.8	chr7	-	2241	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCGTCTGTGAGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	79392828	79385704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79387659_79389912_79390029_79392657
ENSMUST00000032766.5	chr7	-	2090	11	FSM	ENSMUSG00000030549.7	ENSMUST00000032766.5	2090	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	3.38969025133566	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGGAGTGGATGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	79267405	79243110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79243549_79244529_79244737_79248288_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
ENSMUST00000032779.12	chr7	+	2493	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGTTGTGTGTCTTT	NA	False	NA	NA	False	AATAAA	-34	NA	87927292	87960096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ENSMUST00000032779.12-0	chr7	+	1867	7	FSM	ENSMUSG00000030560.18	ENSMUST00000032779.12	2493	7	49	577	0	-577	multi-exon	FALSE	canonical	3	323	junction_5	18.6100331362771	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATAGTCTTTCTATGTGT	NA	False	NA	12	True	AATAAA	-17	NA	87927341	87959519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_87927583_87930594_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87957220_87957353_87958607
ENSMUST00000032781.14	chr7	+	3753	18	FSM	ENSMUSG00000030562.18	ENSMUST00000032781.14	3753	18	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.12706679058871	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTGTGGAATTTCTA	NA	False	NA	NA	False	AATAAA	-15	NA	86895856	87047918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_86896111_86896695_86896792_86944991_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ENSMUST00000032796.14	chr7	+	3376	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5.78791845139511	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACACTTTTCACTGCTG	NA	False	NA	NA	False	GATAAA	-24	NA	29515543	29530365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ENSMUST00000032802.5	chr7	+	4113	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTAGGGAAAAAAGA	NA	False	NA	NA	False	AAGAAA	-21	NA	29467976	29479246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ENSMUST00000032802.5-0	chr7	+	3039	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	0	1074	0	-1074	multi-exon	FALSE	canonical	3	71	junction_4	7.79021822544144	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTAGGAGCTTTTTCC	NA	False	NA	NA	False	AATAAA	-11	NA	29467976	29478172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ENSMUST00000032808.6	chr7	-	383	4	FSM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	72	1011	-56	0	multi-exon	FALSE	canonical	3	53	junction_3	7.36357401145817	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTCCCCAGCGCCCTCTG	1855	False	NA	-11	True	ATTAAA	-14	NA	28947819	28946996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28947160_28947321_28947391_28947552_28947666_28947781
ENSMUST00000032809.10	chr7	+	1111	8	FSM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	365.371993833067	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6061	False	NA	12	True	AATAAA	-15	NA	28937777	28946954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUST00000032818.13	chr7	+	1958	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	22.6838170411321	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416228	28437569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
ENSMUST00000032820.15	chr13	-	3918	4	FSM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.64098759787715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATTATTGAGGATAGT	NA	False	NA	NA	False	AATAAA	-14	NA	21637830	21626349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21630000_21631955_21632065_21633610_21633687_21637747
ENSMUST00000032823.5	chr7	-	2611	8	FSM	ENSMUSG00000030602.14	ENSMUST00000032823.5	2611	8	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_7	25.4076960861894	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTATGTGTGTG	NA	False	NA	-5	True	ATTAAA	-19	NA	28267662	28258245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458
ENSMUST00000032824.10	chr7	-	1440	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	0	0	0	0	multi-exon	FALSE	canonical	3	2113	junction_5	109.082033351052	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749526	27741131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ENSMUST00000032825.14	chr7	-	2125	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	379.595691346581	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTGCCTCCTCATT	NA	False	NA	-6	True	AATACA	-18	NA	78798808	78783516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
ENSMUST00000032839.13	chr7	-	2269	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	8.89873586527884	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACTGTCTCTTCCTTGA	NA	False	NA	-3	True	AATAAA	-18	NA	78497011	78477221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ENSMUST00000032840.5	chr7	+	1056	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78432866	78442737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUST00000032840.5-0	chr7	+	819	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	237	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	39.2153031353833	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433103	78442737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUST00000032841.7	chr7	-	1134	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_2	24.7296493213219	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACAGACCTACTGGGC	NA	False	NA	NA	False	AGTAAA	-18	NA	78432837	78424983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ENSMUST00000032842.13	chr7	+	1596	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210356	92231502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUST00000032842.13-0	chr7	+	1229	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	367	0	367	0	multi-exon	FALSE	canonical	3	146	junction_4	17.8658193207029	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTGTAAATGTGTTAT	NA	False	NA	10	True	AATAAA	-18	NA	92210723	92231502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUST00000032843.9	chr7	-	2259	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGCATGGAGGTCCCTG	6020	False	NA	NA	False	NA	NA	NA	90125209	90116645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ENSMUST00000032843.9-1	chr7	-	2093	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	6	160	0	-160	multi-exon	FALSE	canonical	3	210	junction_1	24.1389208540896	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGGGGGCACATTGT	6026	False	NA	NA	False	NA	NA	NA	90125203	90116805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ENSMUST00000032844.7	chr7	-	799	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_4	32.5297940356222	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	1645	False	NA	NA	False	AATAAA	-19	NA	90106437	90099907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
ENSMUST00000032865.17	chr7	-	1585	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_9	7.3524942432914	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTCTTGGTTTTAGC	NA	False	NA	-4	True	AATAAA	-32	NA	84255150	84234366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ENSMUST00000032874.14	chr7	+	1647	9	FSM	ENSMUSG00000030638.14	ENSMUST00000032874.14	1647	9	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_3	40.04040927613	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81824543	81956627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUST00000032877.11	chr7	-	3387	6	FSM	ENSMUSG00000030641.11	ENSMUST00000032877.11	3387	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	35.6168499449348	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523455	92506732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92521969_92522053_92523348
ENSMUST00000032882.9	chr7	+	683	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	0	0	0	0	multi-exon	FALSE	canonical	3	2164	junction_2	233	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTTTCCTGGTTCTGC	NA	False	NA	21	True	ATTAAA	-20	NA	97049209	97057009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97049565_97056072_97056217_97056825
ENSMUST00000032882.9-0	chr7	+	583	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	100	0	0	0	multi-exon	FALSE	canonical	3	2164	junction_2	233	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTTTCCTGGTTCTGC	NA	False	NA	21	True	ATTAAA	-20	NA	97049309	97057009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97049565_97056072_97056217_97056825
ENSMUST00000032884.16	chr7	+	937	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAATGTCTATTCCCTG	7837	False	NA	19	True	AATAAA	-19	NA	101545634	101548745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ENSMUST00000032884.16-0	chr7	+	3268	5	FSM	ENSMUSG00000030649.19	ENSMUST00000032884.16	937	5	-20	-2311	0	0	multi-exon	FALSE	canonical	3	304	junction_1	120.728000066265	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTCCAGACTCCTC	7817	False	NA	10	True	NA	NA	NA	101545614	101551056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ENSMUST00000032887.4	chr7	-	914	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6625	False	NA	-2	True	AATAAA	-16	NA	118132579	118124284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
ENSMUST00000032887.4-0	chr7	-	859	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	55	0	0	0	multi-exon	FALSE	canonical	3	921	junction_3	42.5234053198941	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6680	False	NA	-2	True	AATAAA	-16	NA	118132524	118124284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
ENSMUST00000032888.10	chr7	-	2171	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	2173	junction_1	168.469106960297	2731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGTTAACTCTGA	NA	False	NA	-11	True	ATTAAA	-25	NA	117728885	117718113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ENSMUST00000032891.15	chr7	-	15557	63	FSM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_39	26.3486045060696	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATCTAAGCTCTGAATT	NA	False	NA	-4	True	AATAAA	-29	NA	117842860	117730530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ENSMUST00000032895.15	chr7	+	1685	14	FSM	ENSMUSG00000030659.15	ENSMUST00000032895.15	1685	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	11.132340009308	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACACGTTTTTATCTT	NA	False	NA	NA	False	AATAAA	-44	NA	116103603	116139819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ENSMUST00000032898.9	chr14	+	4518	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	0	0	0	0	multi-exon	TRUE	canonical	3	890	junction_17	126.92017018583	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1831	False	NA	16	True	ATTAAA	-17	NA	121148635	121185411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ENSMUST00000032899.12	chr7	+	1479	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	0	0	0	0	multi-exon	FALSE	canonical	3	1664	junction_2	78.2527954772224	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTGATGCCTTTAT	NA	False	NA	29	True	AATAAA	-20	NA	115692535	115704445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ENSMUST00000032906.11	chr7	-	994	5	FSM	ENSMUSG00000030669.14	ENSMUST00000032906.11	994	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	7.39932429347437	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGAGTCTTTGCTGTTACT	2034	False	NA	0	True	ATTAAA	-27	NA	114235592	114230712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_114231141_114231650_114231835_114233702_114233844_114234361_114234457_114235446
ENSMUST00000032909.9	chr7	+	5307	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	-56	1322	-56	-1322	multi-exon	FALSE	canonical	3	54	junction_14	11.2573926327942	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTATTGAACTTGCGT	NA	False	NA	1	True	AATAAA	-11	NA	114014459	114137164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ENSMUST00000032910.13	chr7	+	766	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	683.213892000318	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGTGTGTTCATGCGCA	2960	False	NA	42	True	AATAAA	-34	NA	126810779	126813470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUST00000032912.6	chr7	-	2050	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCTGCATGGCACCTC	NA	False	NA	NA	False	NA	NA	NA	126721398	126706285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
ENSMUST00000032912.6-0	chr7	-	1209	4	FSM	ENSMUSG00000030674.6	ENSMUST00000032912.6	2050	4	185	656	0	-656	multi-exon	FALSE	canonical	3	73	junction_2	9.46337971105226	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATGAGTGGTTGGTAAA	NA	False	NA	1	True	NA	NA	NA	126721213	126706941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126707414_126707505_126707638_126707880_126708417_126721144
ENSMUST00000032915.8	chr7	-	2115	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_8	49.8885147636753	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGAGCCTGGTTTTTGA	7925	False	NA	-6	True	AATACA	-13	NA	126641643	126626902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ENSMUST00000032916.6	chr7	-	2347	5	FSM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	136.928813622261	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	330	False	NA	-31	True	AATAAA	-14	NA	126625624	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ENSMUST00000032920.5	chr7	+	1974	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATGTGTTTACTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	126575085	126579334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
ENSMUST00000032920.5-0	chr7	+	1849	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	464	-339	0	0	multi-exon	FALSE	canonical	3	352	junction_2	28.9344085821708	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCTCAGAGCATGGT	NA	False	NA	24	True	NA	NA	NA	126575549	126579673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
ENSMUST00000032924.6	chr7	+	1676	6	FSM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	8.49470423263812	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGACTCTCGGGTGAG	NA	False	NA	25	True	AATAAA	-17	NA	126528050	126544803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
ENSMUST00000032927.14	chr7	+	1400	7	FSM	ENSMUSG00000030688.16	ENSMUST00000032927.14	1400	7	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_2	26.7581763205193	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTCTTTGTGCCTGCT	NA	False	NA	7	True	AATAAA	-18	NA	100970319	100995515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUST00000032934.12	chr7	-	1511	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	0	0	0	0	multi-exon	FALSE	canonical	3	19253	junction_4	564.678448322583	12266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398426	126394405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ENSMUST00000032936.8	chr7	-	1359	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	1828	junction_8	282.244574792856	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTCTGTCAGGTTTG	5070	False	NA	NA	False	AATAAA	-15	NA	126391668	126385037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ENSMUST00000032946.10	chr7	+	3214	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_3	112.157687827342	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256792	100290475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUST00000032956.10	chr7	+	1312	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_3	31.8433666561813	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTTGTACTTTAGGT	111	False	NA	NA	False	AATACA	-18	NA	126248480	126272097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ENSMUST00000032961.4	chr7	-	829	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	0	0	0	0	multi-exon	FALSE	canonical	3	3716	junction_2	16	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGGCGTGTGTTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	126224848	126222420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126222752_126224061_126224206_126224494
ENSMUST00000032963.10	chr7	-	2772	14	FSM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	101.852195962999	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGAGGAGCTGTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	100021514	99975943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004009_100004474_100004569_100020929
ENSMUST00000032969.14	chr7	-	3069	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_4	47.2898570362863	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770772	99731317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ENSMUST00000032978.8	chr7	-	3393	10	FSM	ENSMUSG00000030733.11	ENSMUST00000032978.8	3393	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	100.767548176147	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8204	False	NA	-3	True	AATAAA	-26	NA	126074275	126066167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ENSMUST00000032981.7	chr8	-	1356	1	FSM	ENSMUSG00000030735.7	ENSMUST00000032981.7	1356	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	702	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTGGACTTCTGCTCA	6339	False	NA	NA	False	NA	NA	NA	67968242	67966886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_67966900_67968200
ENSMUST00000032988.10	chr7	-	1852	6	FSM	ENSMUSG00000030800.11	ENSMUST00000032988.10	1852	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	2.78567765543682	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTACACATATTTACAG	NA	False	NA	NA	False	AATAAA	-14	NA	127529276	127524887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127525813_127525916_127526084_127526170_127526443_127526980_127527144_127528728_127528747_127528969
ENSMUST00000032992.7	chr7	-	3383	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAGTTTCTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	126165583	126145626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ENSMUST00000032992.7-0	chr7	-	2874	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	53	456	0	-456	multi-exon	FALSE	canonical	3	1924	junction_14	277.99846672239	4767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165530	126146082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ENSMUST00000032994.15	chr7	-	2219	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	0	0	0	0	multi-exon	TRUE	canonical	3	348	junction_9	48.6508899292612	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTGTCTCTCTGT	NA	False	NA	1	True	AATAAA	-21	NA	125976622	125969231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUST00000032997.8	chr7	-	1235	12	FSM	ENSMUSG00000030742.8	ENSMUST00000032997.8	1235	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	5.32264769756525	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTCGTTGTCTTCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	125968706	125962998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125963214_125963367_125963473_125963569_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666_125967755_125967973_125968009_125968113_125968142_125968319
ENSMUST00000032998.13	chr7	-	1908	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	0	0	0	0	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGAGTATGCAATTATT	8335	False	NA	-12	True	AATAAA	-29	NA	99132945	99127102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUST00000032998.13-0	chr7	-	824	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	87	997	0	0	multi-exon	FALSE	canonical	3	4974	junction_1	3419.39811549083	4098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACAAGGCCTGACT	8422	False	NA	-45	True	AATAAA	-25	NA	99132858	99128099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUST00000033001.6	chr7	-	2262	8	FSM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	10.965623464226	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTTGTTGCTTAATGC	NA	False	NA	NA	False	AATAAA	-18	NA	98831926	98802864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904_98819034_98831598
ENSMUST00000033004.8	chr7	+	3598	11	FSM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	151	1507	0	0	multi-exon	TRUE	canonical	0	0	junction_6	3.9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTCCTTTACTATACAC	NA	False	NA	NA	False	AATAAA	-15	NA	125151442	125177139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_125151501_125163723_125163900_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
ENSMUST00000033006.14	chr7	-	1120	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_7	177.832872698624	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTGTGTGAGGTTGGGT	NA	False	NA	-11	True	AGTAAA	-33	NA	125090768	125066811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ENSMUST00000033008.10	chr7	-	1201	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	0	0	0	0	multi-exon	FALSE	canonical	3	2548	junction_6	196.061655709387	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875353	113863840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUST00000033008.10-0	chr7	-	1150	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	51	0	0	0	multi-exon	TRUE	canonical	3	2548	junction_6	196.061655709387	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCAAGTTTTTGTTTT	NA	False	NA	0	True	AATAAA	-17	NA	113875302	113863840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUST00000033009.16	chr7	+	3723	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	20.5791156272567	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352309	98367269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ENSMUST00000033010.9	chr7	+	2389	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	4.74664220738176	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAGAAACATTTCTTTA	NA	False	NA	NA	False	AATAAA	-27	NA	125043847	125061441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
ENSMUST00000033012.9	chr7	-	3346	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_12	34.3731688854697	996	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATCTGTGGGATTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	113853946	113814793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ENSMUST00000033018.15	chr7	+	4962	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	0	0	0	0	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTACTCCTTTGCAA	NA	False	NA	14	True	AATAAA	-22	NA	113113040	113170718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUST00000033018.15-0	chr7	+	3881	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	28	1053	0	0	multi-exon	FALSE	canonical	2	280	junction_11	48.5005727343044	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGCAAAACTGTATT	NA	False	NA	2	True	AATAAA	-16	NA	113113068	113169665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUST00000033020.14	chr7	-	3917	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	0	7423	0	-154	multi-exon	FALSE	canonical	3	186	junction_1	20.7511445467473	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTGGTTTTGGAAGAAA	NA	False	NA	-3	True	AATAAA	-16	NA	97958745	97863018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUST00000033023.10	chr7	+	1487	6	FSM	ENSMUSG00000030762.12	ENSMUST00000033023.10	1487	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2.57681974534503	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCTGTTGACTTGTCTT	4376	False	NA	7	True	AATAAA	-21	NA	123061513	123067227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_123061682_123061796_123062042_123063411_123063539_123064331_123064547_123065808_123065944_123066630
ENSMUST00000033030.14	chr7	+	4454	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCGCTGTTTCTTCCAA	3329	False	NA	NA	False	AATGAA	-13	NA	112026912	112190899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUST00000033030.14-0	chr7	+	1533	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	199	2722	0	0	multi-exon	FALSE	canonical	2	13	junction_2	5.24603024517905	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCGTGCTCAAGTTCAT	3528	False	NA	NA	False	AATAAA	-34	NA	112027111	112188177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUST00000033036.7	chr7	-	3359	8	FSM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	18.9198092927352	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGGTATGGGTCCATT	NA	False	NA	-1	True	AATAAA	-23	NA	111758264	111715223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389_111757626_111758172
ENSMUST00000033040.12	chr7	+	3065	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	56.3067853960129	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97492141	97561588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ENSMUST00000033044.16	chr7	-	2627	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	13.6897670623799	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	1106	False	NA	-16	True	AGTAAA	-16	NA	127897342	127870550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ENSMUST00000033049.9	chr7	-	558	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	-57	179	-57	-179	multi-exon	FALSE	canonical	3	110	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTCTGGCTCTTTGG	5326	False	NA	-6	True	AATAAA	-14	NA	127805616	127804785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127804985_127805071_127805209_127805394
ENSMUST00000033054.10	chr7	+	1390	4	FSM	ENSMUSG00000030790.16	ENSMUST00000033054.10	1390	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCGGTTCATGCAT	5113	False	NA	NA	False	AATAAA	-16	NA	110226867	110229027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_110227029_110227463_110227584_110227731_110227882_110228068
ENSMUST00000033056.5	chr7	-	3800	3	FSM	ENSMUSG00000030793.5	ENSMUST00000033056.5	3800	3	0	0	0	0	multi-exon	FALSE	canonical	3	1219	junction_2	45	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACATTTTTGCCTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	127593039	127588879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127592138_127592286_127592344_127592554
ENSMUST00000033058.14	chr7	-	7154	41	FSM	ENSMUSG00000038371.16	ENSMUST00000033058.14	7154	41	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	24.8098266821838	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAACCTCTGAGT	NA	False	NA	NA	False	ATTAAA	-11	NA	110214127	109907228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ENSMUST00000033060.14	chr7	+	2140	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGGGGATTTATTTGA	5430	False	NA	NA	False	AATAAA	-38	NA	44865176	44883068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUST00000033060.14-0	chr7	+	2074	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	57	9	0	0	multi-exon	FALSE	canonical	3	157	junction_1	60.1724793633042	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCAAAAACCCAAAGGGGA	5487	False	NA	NA	False	AATAAA	-29	NA	44865233	44883059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUST00000033063.15	chr7	-	1268	9	FSM	ENSMUSG00000030798.16	ENSMUST00000033063.15	1268	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	25.228641957109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTTTTTTTTTTTTTT	4144	False	NA	-22	True	AATAAA	-16	NA	44888539	44883064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083_44888159_44888383
ENSMUST00000033070.9	chr7	+	1579	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	15.0053323855222	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATTCCTCGCTCCTTT	NA	False	NA	92	True	NA	NA	NA	127511687	127525009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ENSMUST00000033074.8	chr7	-	748	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	18.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGCATATGTCTGCC	NA	False	NA	-11	True	AATAAA	-19	NA	127494789	127492234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127492664_127493676_127493787_127494580
ENSMUST00000033075.14	chr7	+	1456	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	24.7872951327893	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTGCAGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	127440935	127448191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ENSMUST00000033081.14	chr7	+	3410	11	FSM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	25.7536405193518	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCAGTTTGGCTCTTC	1533	False	NA	4	True	NA	NA	NA	127345946	127368100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127346310_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ENSMUST00000033086.8	chr7	+	1570	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	31.2018517968975	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGCTGTCTAGT	NA	False	NA	26	True	AATAAA	-27	NA	127172575	127182479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUST00000033093.10	chr7	-	867	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_5	352.488638114762	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	9915	False	NA	-2	True	AATAAA	-22	NA	45116322	45111120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ENSMUST00000033095.10	chr7	+	2402	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_10	17.7132718603876	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGACTCCTTTGTGC	NA	False	NA	8	True	TATAAA	-13	NA	127070661	127075930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUST00000033096.16	chr7	-	2111	13	FSM	ENSMUSG00000030824.18	ENSMUST00000033096.16	2111	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.246014848922	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	False	NA	-4	True	AATAAA	-19	NA	45159750	45142531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45143374_45143540_45143626_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ENSMUST00000033098.16	chr7	+	1772	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	0	0	0	0	multi-exon	TRUE	canonical	3	349	junction_4	47.8895604490164	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTATCATGCTCTAAG	2255	False	NA	NA	False	AATAAA	-18	NA	45219576	45239135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ENSMUST00000033121.7	chr7	+	4257	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_14	37.3234510730184	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGTGTGGGGTGCATAC	8093	False	NA	29	True	AATAAA	-29	NA	45683121	45733636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ENSMUST00000033127.12	chr7	-	1465	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	7.18609768928867	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTGGCAGATTATGGG	NA	False	NA	-10	True	AATAAA	-35	NA	46289231	46092577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ENSMUST00000033131.12	chr7	+	1119	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_4	69.0230939613692	398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTCCTGCCCACT	7027	False	NA	28	True	GATAAA	-32	NA	101555110	101561110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ENSMUST00000033135.9	chr7	-	1580	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	29.2730095977351	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063079	128044003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ENSMUST00000033136.9	chr7	+	2562	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	8.2192186706253	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTGTGGTTTCTAA	7142	False	NA	17	True	AATAAA	-22	NA	128125339	128148705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ENSMUST00000033139.15	chr7	-	4735	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	49.9651117950737	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121310	129993222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUST00000033154.8	chr7	+	2199	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	0	0	0	0	multi-exon	FALSE	canonical	3	1108	junction_2	92.3724345606776	1350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTTTCTCTTTTTG	NA	False	NA	56	True	ATTAAA	-14	NA	121758661	121769096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUST00000033156.5	chr7	+	1532	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_5	42.3008274150755	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	14	True	AATAAA	-15	NA	121732263	121748267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ENSMUST00000033157.10	chr7	-	3479	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTCCTAACATGCATCA	6358	False	NA	NA	False	AATAAA	-37	NA	121701109	121684625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUST00000033157.10-0	chr7	-	688	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	35	2756	0	299	multi-exon	FALSE	canonical	3	149	junction_1	2248.42489311963	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGATCGTTTCTGCTGAA	6393	False	NA	NA	False	TTTAAA	-36	NA	121701074	121687381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUST00000033158.6	chr7	+	4849	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	33.5642005052341	998	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTCTCTTTCCTTCC	NA	False	NA	9	True	ATTAAA	-14	NA	121666397	121681417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ENSMUST00000033159.4	chr7	-	2046	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	13.5317912709294	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCTCCAT	NA	False	NA	-1	True	TTTAAA	-18	NA	121666486	121638043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ENSMUST00000033160.15	chr7	-	4915	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_16	35.03391214238	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTGTCACTGTTTTG	NA	False	NA	-5	True	AATAAA	-14	NA	121620445	121585944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ENSMUST00000033163.8	chr7	+	1823	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	46.4435140789325	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9427	False	NA	7	True	AATAAA	-16	NA	120633667	120676058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ENSMUST00000033169.9	chr7	-	2525	5	FSM	ENSMUSG00000030878.12	ENSMUST00000033169.9	2525	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	6.89202437604511	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTACGTCTGTTGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	120581535	120556258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569662_120581199
ENSMUST00000033171.15	chr7	-	1772	8	FSM	ENSMUSG00000030881.16	ENSMUST00000033171.15	1772	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	44.3170396123207	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGTGAGGTCAATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	105289521	105284827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287552_105288215_105288313_105288531_105288673_105289451
ENSMUST00000033176.7	chr7	+	1896	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_9	72.1248916810278	1006	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATCCTCTCAGCTGGT	NA	False	NA	22	True	AGTAAA	-14	NA	120234398	120258747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUST00000033179.14	chr7	-	3053	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGCATGTTTGGAGTCT	9803	False	NA	NA	False	AATAAA	-17	NA	105385988	105380936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
ENSMUST00000033179.14-0	chr7	-	2286	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	289	478	-119	196	multi-exon	FALSE	canonical	3	246	junction_4	21.202725191719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCGTTGATCTCAC	9868	False	NA	-11	True	AATAAA	-13	NA	105385699	105381414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
ENSMUST00000033182.10	chr7	+	1795	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	33.4937805171846	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTGGGGACAGAGGG	NA	False	NA	28	True	AATAAA	-18	NA	105385798	105392132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUST00000033184.6	chr7	-	3558	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGTATTGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	105401442	105394017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ENSMUST00000033184.6-0	chr7	-	2450	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	0	1108	0	0	multi-exon	FALSE	canonical	3	275	junction_12	25.3212690571912	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGAGTGATTTTTTTT	NA	False	NA	4	True	AATAAA	-30	NA	105401442	105395125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ENSMUST00000033189.6	chr7	+	2573	5	FSM	ENSMUSG00000030898.16	ENSMUST00000033189.6	2573	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1.6583123951777	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGGCTCAGATTATTCG	NA	False	NA	NA	False	GATAAA	-15	NA	105074937	105085546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_105075383_105082789_105083042_105083201_105083452_105083726_105083903_105084096
ENSMUST00000033198.6	chr7	-	1383	8	FSM	ENSMUSG00000030905.6	ENSMUST00000033198.6	1383	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTTGACAACTTTCTA	NA	False	NA	1	True	AATAAA	-21	NA	119801334	119785602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_119785922_119788948_119789034_119789674_119789797_119794547_119794732_119796872_119796975_119798470_119798534_119800299_119800451_119800977
ENSMUST00000033210.13	chr7	+	1484	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	8.8423695919137	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTTTTCTTTTTCTT	NA	False	NA	5	True	ATTAAA	-14	NA	119701575	119720209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ENSMUST00000033224.14	chr7	-	3487	9	FSM	ENSMUSG00000030929.18	ENSMUST00000033224.14	3487	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	22.8965062837106	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTGTGTTTGATGCC	NA	False	NA	0	True	AATAAA	-36	NA	119393205	119383049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391567_119391653_119391722_119393140
ENSMUST00000033236.9	chr7	-	2689	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	48.9239773072014	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCATTCTTTTTTATT	NA	False	NA	-1	True	AATAAA	-20	NA	119320021	119314315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
ENSMUST00000033241.6	chr7	+	1612	7	FSM	ENSMUSG00000030946.14	ENSMUST00000033241.6	1612	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_6	19.9979165581484	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGCCTTTCTTA	NA	False	NA	12	True	AATAAA	-20	NA	132212367	132308149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_132212560_132232210_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132251986_132252079_132307320
ENSMUST00000033257.15	chr7	-	1107	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_3	60.7651215747982	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	132454402	132429185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ENSMUST00000033265.5	chr7	+	2210	9	FSM	ENSMUSG00000030967.16	ENSMUST00000033265.5	2210	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	13.1142813375343	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTCAAAGTTAGTGTGG	NA	False	NA	NA	False	AAAAAG	-22	NA	132551312	132585725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ENSMUST00000033269.15	chr7	-	2321	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	136.177861636905	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725096	132589349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ENSMUST00000033276.11	chr7	-	1762	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	13.5163367087644	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAGGACTGATCTGAG	NA	False	NA	NA	False	NA	NA	NA	133311010	133288093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ENSMUST00000033282.5	chr7	+	1244	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	0	0	0	0	multi-exon	FALSE	canonical	3	1578	junction_1	47.9215214931895	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTGTTCATGTCC	1307	False	NA	23	True	AATAAA	-24	NA	133311061	133322874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ENSMUST00000033283.10	chr7	+	3997	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTGGCTATGAACGGC	NA	False	NA	NA	False	AATAAA	-12	NA	102090901	102118978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUST00000033283.10-0	chr7	+	3042	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	120	835	-68	254	multi-exon	FALSE	canonical	3	773	junction_6	74.8152456899951	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTTGTCATCTATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	102091021	102118143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUST00000033289.6	chr7	+	4085	12	FSM	ENSMUSG00000030987.6	ENSMUST00000033289.6	4085	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	17.5852116683732	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101917012	102086525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
ENSMUST00000033290.12	chr7	-	2955	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_11	48.5725154403017	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378532	133322670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ENSMUST00000033292.14	chr7	+	2046	7	FSM	ENSMUSG00000030990.19	ENSMUST00000033292.14	1201	7	-41	-804	0	0	multi-exon	FALSE	canonical	3	107	junction_5	27.0657635317306	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	594	False	NA	16	True	AATAAA	-23	NA	101872234	101887774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ENSMUST00000033310.9	chr7	-	10061	14	FSM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	63.2390037685062	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	-18	True	AATAAA	-19	NA	135318090	135291512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ENSMUST00000033313.3	chrX	+	2324	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_3	62.8369666279333	1080	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGTTACAGTTTTAT	NA	False	NA	84	True	AATAAA	-19	NA	12454039	12483288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUST00000033321.11	chrX	-	4057	25	FSM	ENSMUSG00000031012.18	ENSMUST00000033321.11	4057	25	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	23.235172990294	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTAGTGAAATGTGTTT	NA	False	NA	-23	True	TATAAA	-36	NA	13712795	13387569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUST00000033325.9	chr7	+	4027	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_6	36.1790771003727	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACTGGTTACATTAA	NA	False	NA	77	True	ATTAAA	-20	NA	109820917	109882713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ENSMUST00000033326.10	chr7	+	3419	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_6	26.6084573021436	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAAATCTTCACGGTG	NA	False	NA	26	True	ATTAAA	-23	NA	109721252	109742493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUST00000033331.7	chr7	-	3910	7	FSM	ENSMUSG00000034825.15	ENSMUST00000033331.7	3910	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	3.54338193757822	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGTCTGAGTCTC	NA	False	NA	-5	True	AATAAA	-15	NA	109380752	109357265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109360397_109360853_109360949_109361027_109361081_109362690_109362831_109364672_109364756_109365679_109365842_109380506
ENSMUST00000033333.13	chr7	-	1703	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTTTCTGTTCTCCAG	NA	False	NA	2	True	AATAAA	-19	NA	109351486	109335040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
ENSMUST00000033333.13-0	chr7	-	933	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	33	737	0	-735	multi-exon	FALSE	canonical	3	85	junction_4	15.7698287879102	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAAGCCCCGTGCCTGG	NA	False	NA	NA	False	AATAAA	-21	NA	109351453	109335777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
ENSMUST00000033335.6	chr7	+	1028	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTTATTGCTATTAAA	NA	False	NA	NA	False	AATAAA	-25	NA	109302896	109311396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUST00000033335.6-0	chr7	+	966	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	62	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	91.1249691357972	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTTATTGCTATTAAA	NA	False	NA	NA	False	AATAAA	-25	NA	109302958	109311396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUST00000033341.12	chr7	+	5997	12	FSM	ENSMUSG00000031028.15	ENSMUST00000033341.12	5997	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	5.29306422836714	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGTCCTTGGTTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	108610031	108633667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_108610346_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
ENSMUST00000033342.7	chr7	+	2514	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	0	0	0	0	multi-exon	FALSE	canonical	3	2245	junction_2	107.423632105296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTGCAGAGAGTACTA	NA	False	NA	NA	False	TATAAA	-14	NA	108533623	108542158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ENSMUST00000033342.7-0	chr7	+	1254	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	0	1260	0	683	multi-exon	FALSE	canonical	3	2245	junction_2	107.423632105296	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATCTGATGCGAGTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	108533623	108540898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ENSMUST00000033372.13	chrX	+	4417	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_2	17.8395627749113	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGATGTCTATACTT	NA	False	NA	3	True	AATAAA	-18	NA	20230719	20267092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ENSMUST00000033380.7	chrX	+	3120	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	0	0	0	0	multi-exon	FALSE	canonical	3	1538	junction_15	84.886172149663	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ENSMUST00000033383.3	chrX	+	3467	21	FSM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_13	34.5694590643244	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570144	20586778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ENSMUST00000033388.12	chr7	+	2015	5	FSM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	3.69966214673719	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGTCTGGGATCATT	NA	False	NA	8	True	AATAAA	-18	NA	144468871	144474871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346
ENSMUST00000033389.7	chr7	+	1810	3	FSM	ENSMUSG00000031073.7	ENSMUST00000033389.7	1810	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTGTTCTATTCCAAG	NA	False	NA	NA	False	ATTAAA	-23	NA	144450267	144454690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_144450669_144450852_144450957_144453385
ENSMUST00000033393.15	chr7	-	4585	25	FSM	ENSMUSG00000031075.20	ENSMUST00000033393.15	4585	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.1820329449413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACCCTGGTCTCTCCTGG	NA	False	NA	NA	False	AATAAA	-10	NA	144292329	144142289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292099
ENSMUST00000033394.8	chr7	-	1527	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	0	2376	0	-2376	multi-exon	FALSE	canonical	3	26	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGCTGGGTGTGAT	NA	False	NA	-7	True	AATAAA	-19	NA	144136200	144133430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144134598_144135840
ENSMUST00000033407.13	chr7	-	2913	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_7	190.956545694956	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGATCTTCTGCAG	NA	False	NA	-18	True	AATAAA	-16	NA	144024482	143989469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUST00000033415.15	chr7	-	2641	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTATTGATGTGTACG	NA	False	NA	NA	False	AATAAA	-25	NA	143376578	143349320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ENSMUST00000033415.15-0	chr7	-	2375	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	0	266	0	0	multi-exon	FALSE	canonical	3	51	junction_5	7.20416546173115	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTCTTTTTAAAGTGT	NA	False	NA	-16	True	TATAAA	-4	NA	143376578	143349586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ENSMUST00000033418.8	chrX	+	3712	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.27083130081252	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTGGTC	NA	False	NA	NA	False	AATAAA	-24	NA	35375762	35434912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ENSMUST00000033419.13	chrX	+	6665	53	FSM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	0	0	0	0	multi-exon	FALSE	canonical	1	53	junction_52	21.5813446724207	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35152484	35340215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ENSMUST00000033427.7	chrX	+	2677	8	FSM	ENSMUSG00000031101.7	ENSMUST00000033427.7	2677	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.30930734141595	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCGTCGCCTGTTTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	47235312	47250442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_47235595_47243402_47243499_47243852_47244000_47246295_47246438_47247609_47247759_47247918_47248129_47248280_47248432_47248942
ENSMUST00000033429.9	chrX	-	5847	9	FSM	ENSMUSG00000031103.13	ENSMUST00000033429.9	5847	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	25.7718354022371	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGTTCAGATTCCAAT	NA	False	NA	-1	True	NA	NA	NA	47552009	47499925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47551949
ENSMUST00000033430.3	chrX	+	1158	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACGTGGCTTTGTGTCTT	NA	False	NA	6	True	AATAAA	-14	NA	47608161	47619109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_47608736_47618525
ENSMUST00000033433.3	chrX	+	1747	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	50.9768574943572	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCATTTGGTCCACTCA	NA	False	NA	NA	False	NA	NA	NA	47783880	47799600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
ENSMUST00000033442.14	chrX	-	4421	20	FSM	ENSMUSG00000031111.17	ENSMUST00000033442.14	4421	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.03569259008565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTAGTGGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	48886626	48871412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879644_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
ENSMUST00000033444.11	chrX	+	3639	12	FSM	ENSMUSG00000031112.11	ENSMUST00000033444.11	3639	12	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_11	5.29618605950164	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCCTCGATGTTTGTTT	NA	False	NA	NA	False	AATAAA	-13	NA	49929923	49981974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUST00000033449.8	chrX	-	1454	4	FSM	ENSMUSG00000031118.9	ENSMUST00000033449.8	1454	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	37.249906785864	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTTGCTCCGTTTCA	NA	False	NA	-2	True	CATAAA	-17	NA	51061649	51057571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_51058747_51059091_51059163_51059786_51059953_51061607
ENSMUST00000033450.3	chrX	-	2651	9	FSM	ENSMUSG00000031119.5	ENSMUST00000033450.3	2651	9	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_5	29.8493613834534	476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTGGAAAATTTCCATT	NA	False	NA	-19	True	ATTAAA	-15	NA	51254129	51141897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_51142604_51142693_51142870_51143322_51143460_51145536_51145684_51145777_51145909_51151734_51151901_51163170_51163563_51180518_51180678_51253492
ENSMUST00000033458.3	chrX	+	1022	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	16.2819544532076	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTGGCAAATAGTCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	55181931	55198858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ENSMUST00000033473.12	chrX	-	2499	5	FSM	ENSMUSG00000031137.18	ENSMUST00000033473.12	2499	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	5.62916512459885	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACTTCAATGTGTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	58179796	58107504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58179236
ENSMUST00000033478.5	chrX	-	3659	26	FSM	ENSMUSG00000031139.17	ENSMUST00000033478.5	3659	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_25	175.787125808462	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATACTCTGGTGTTCGTGT	NA	False	NA	-5	True	AATAAA	-26	NA	59193003	59101318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59192833
ENSMUST00000033480.13	chrX	-	5939	29	FSM	ENSMUSG00000062949.14	ENSMUST00000033480.13	5939	29	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	18.7130588474619	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATGGGTATTCGAGTG	NA	False	NA	-10	True	AATAAA	-11	NA	59449172	59268652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_59271154_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ENSMUST00000033483.5	chrX	-	2353	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	25.3807721267498	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	False	NA	-9	True	AATAAA	-19	NA	7471756	7460047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ENSMUST00000033485.14	chrX	+	2301	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	5.54526825320471	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGTTTATTTAGCC	NA	False	NA	97	True	AAAAAG	-31	NA	7523498	7534197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ENSMUST00000033486.6	chrX	-	1157	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	0	0	0	0	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAAGTTAACTTTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	7537629	7534179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
ENSMUST00000033486.6-0	chrX	-	1080	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	77	0	0	0	multi-exon	FALSE	canonical	3	2052	junction_4	105.587641322268	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAAGTTAACTTTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	7537552	7534179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
ENSMUST00000033489.8	chrX	+	1339	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_2	75.5	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGCCTCCTGTGTGAAG	1170	False	NA	7	True	AATAAA	-20	NA	7594677	7597303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7595002_7595954_7596173_7596506
ENSMUST00000033490.13	chrX	-	3658	10	FSM	ENSMUSG00000031150.14	ENSMUST00000033490.13	3658	10	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_9	11.4385097881166	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTGAGTCTCTGTCTG	NA	False	NA	-4	True	AATAAA	-14	NA	7607580	7597952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7607450
ENSMUST00000033494.16	chrX	+	4259	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_8	48.0999935031181	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTGTGTGTGTCTTA	NA	False	NA	22	True	AATAAA	-31	NA	7708069	7742865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ENSMUST00000033495.15	chrX	+	2045	6	FSM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	7.30479294709987	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTGCCATTTATAGAA	NA	False	NA	5	True	AATAAA	-15	NA	7744540	7749671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7744796_7744922_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
ENSMUST00000033497.9	chrX	-	1104	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	154.654902569847	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGGCTTGAGTGCTTC	296	False	NA	-1	True	AATAAA	-22	NA	7765508	7760757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
ENSMUST00000033498.10	chrX	+	2381	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	0	0	0	0	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGCTGTTTGTC	1189	False	NA	2	True	NA	NA	NA	7765595	7774590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ENSMUST00000033498.10-0	chrX	+	897	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	0	1484	0	-103	multi-exon	FALSE	canonical	3	843	junction_3	44.2511016812011	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1189	False	NA	31	True	TTTAAA	-18	NA	7765595	7773106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ENSMUST00000033500.5	chrX	-	1077	2	FSM	ENSMUSG00000031160.5	ENSMUST00000033500.5	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATCTTTGTTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	7794846	7790514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7791453_7794707
ENSMUST00000033501.15	chrX	-	4142	29	FSM	ENSMUSG00000031161.16	ENSMUST00000033501.15	4142	29	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_28	71.4613049995933	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGTGCTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	7814128	7796360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813813
ENSMUST00000033503.3	chrX	-	673	4	FSM	ENSMUSG00000031163.3	ENSMUST00000033503.3	673	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	18.5472369909914	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCACTCTTGGCAGAG	NA	False	NA	-9	True	AATAAA	-21	NA	7884731	7870438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7870742_7871941_7872098_7881456_7881595_7884655
ENSMUST00000033505.7	chrX	-	2114	12	FSM	ENSMUSG00000031165.7	ENSMUST00000033505.7	2114	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	4.36552989219744	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCACGTCGCCTG	7441	False	NA	NA	False	NA	NA	NA	7956737	7947691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7948229_7951744_7951860_7952080_7952536_7952802_7952957_7953168_7953212_7953999_7954175_7954962_7955017_7955112_7955155_7955274_7955378_7955494_7955582_7956082_7956224_7956529
ENSMUST00000033506.13	chrX	-	4183	9	FSM	ENSMUSG00000031166.14	ENSMUST00000033506.13	4183	9	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	7.92839044194974	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCCTCTCTTCATTTG	6921	False	NA	1	True	AATAAA	-21	NA	7999047	7989539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525
ENSMUST00000033509.15	chrX	-	1127	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	614	2	0	0	multi-exon	FALSE	canonical	3	751	junction_2	18.0190871022924	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059137	8051569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
ENSMUST00000033519.3	chrX	-	2176	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	27.1523479647709	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGCTCTGGTTGATCC	NA	False	NA	-1	True	AATAAA	-21	NA	9529242	9520505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ENSMUST00000033522.15	chrX	+	1649	4	FSM	ENSMUSG00000031179.15	ENSMUST00000033522.15	1649	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTTTAGTCTCCCGTT	NA	False	NA	NA	False	AATAAA	-20	NA	63217153	63222384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_63217298_63219533_63219620_63220397_63220469_63221036
ENSMUST00000033540.6	chrX	+	1595	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	0	0	0	0	multi-exon	FALSE	canonical	3	1794	junction_5	66.7580706731403	1420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGACAATTTTTTCATT	NA	False	NA	14	True	ATTAAA	-20	NA	74557904	74578548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUST00000033541.5	chrX	+	2562	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCAGACTCCACTTGT	537	False	NA	NA	False	AATAAA	-21	NA	74426004	74440065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ENSMUST00000033541.5-0	chrX	+	828	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	23	1711	0	420	multi-exon	FALSE	canonical	3	165	junction_1	30.589009464185	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTTTGGTATCTTGG	560	False	NA	NA	False	AATACA	-17	NA	74426027	74438354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ENSMUST00000033542.11	chrX	-	1592	5	FSM	ENSMUSG00000031200.17	ENSMUST00000033542.11	1592	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5.33853912601566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACAACATTTTACATAT	NA	False	NA	NA	False	NA	NA	NA	74460149	74454049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620
ENSMUST00000033544.14	chrX	+	4310	11	FSM	ENSMUSG00000031201.18	ENSMUST00000033544.14	4310	11	0	0	0	0	multi-exon	FALSE	canonical	1	239	junction_10	337.579694294547	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCTTTATGACTTTGG	NA	False	NA	NA	False	NA	NA	NA	74460233	74497607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466505_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ENSMUST00000033545.6	chrX	-	3401	2	FSM	ENSMUSG00000031202.6	ENSMUST00000033545.6	3401	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTTGTAGCTAT	442	False	NA	NA	False	AGTAAA	-28	NA	74621837	74615651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74618614_74621398
ENSMUST00000033547.14	chrX	-	3242	16	FSM	ENSMUSG00000016382.16	ENSMUST00000033547.14	3242	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	76.3600826493936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTCTACTCTCTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	74918180	74829268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74917943
ENSMUST00000033570.6	chrX	+	1518	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_5	20.4743742273116	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCCTGGACTTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	99537896	99559731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
ENSMUST00000033575.7	chrX	-	2316	1	FSM	ENSMUSG00000031224.7	ENSMUST00000033575.7	2316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGCTTATGTGATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	103900873	103898557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_103898600_103900900
ENSMUST00000033577.11	chrX	+	2638	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATAGCTCTTTCCAG	NA	False	NA	NA	False	NA	NA	NA	104123361	104128792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ENSMUST00000033577.11-0	chrX	+	919	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	19	1700	0	326	multi-exon	FALSE	canonical	3	1180	junction_1	116.642359372571	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATGACTGATCTTAGAA	NA	False	NA	22	True	AATAAA	-19	NA	104123380	104127092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ENSMUST00000033578.7	chrX	+	3550	1	FSM	ENSMUSG00000031227.9	ENSMUST00000033578.7	3550	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTATTCAATAAATATAT	NA	False	NA	NA	False	AATAAA	-32	NA	104163983	104167533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_104164000_104167500
ENSMUST00000033583.14	chrX	-	4115	11	FSM	ENSMUSG00000031232.18	ENSMUST00000033583.14	4115	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	64.6371410258839	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055505	105011689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUST00000033591.6	chrX	-	1744	6	FSM	ENSMUSG00000031239.6	ENSMUST00000033591.6	1744	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	8.06473806146238	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCATTCCCATCTCTAC	NA	False	NA	NA	False	TATAAA	-18	NA	106446982	106440704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_106441586_106441701_106441853_106442376_106442488_106442701_106442900_106443172_106443305_106446711
ENSMUST00000033597.9	chrX	-	1934	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.3424721079908	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTTTGCAATATTTCA	NA	False	NA	1	True	AATAAA	-19	NA	108057010	108048139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ENSMUST00000033598.9	chrX	+	2882	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.86744175568088	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATTACTTTTAATTT	NA	False	NA	NA	False	AATAAA	-18	NA	108138970	108206077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
ENSMUST00000033609.9	chrX	+	4502	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_8	78.010695670871	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132959945	132987568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUST00000033617.13	chrX	-	2540	19	FSM	ENSMUSG00000031264.14	ENSMUST00000033617.13	2540	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	2.60104442460436	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATTTTAATTTATTAC	NA	False	NA	NA	False	AATAAA	-16	NA	133483889	133443084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133443557_133446230_133446389_133447460_133447580_133448310_133448376_133450163_133450381_133451055_133451228_133451950_133452026_133455147_133455276_133455437_133455518_133456297_133456353_133457086_133457150_133457536_133457725_133459435_133459504_133459946_133460076_133466345_133466428_133469653_133469723_133473957_133474057_133474665_133474837_133483759
ENSMUST00000033621.8	chrX	-	1384	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	53	1578	53	-1578	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTTTTCAACATAGGCT	NA	False	NA	-15	True	AATAAA	-27	NA	133501701	133490512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ENSMUST00000033634.5	chrX	-	5280	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_14	18.9168942717585	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141173531	141100988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ENSMUST00000033652.9	chrX	+	4133	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_12	13.3855098894289	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285429	159374137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ENSMUST00000033662.9	chrX	-	2848	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_1	109.21011857882	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTTGAGTTCCCTTTC	NA	False	NA	-1	True	ATTAAA	-24	NA	158921409	158905204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ENSMUST00000033664.14	chrX	-	1670	8	FSM	ENSMUSG00000031304.19	ENSMUST00000033664.14	1670	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	5.61702950038214	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTACAGGGGTTGGG	NA	False	NA	NA	False	AATAAA	-26	NA	100311861	100307983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100308644_100308981_100309049_100309235_100309333_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ENSMUST00000033665.9	chrX	+	4348	29	FSM	ENSMUSG00000031303.9	ENSMUST00000033665.9	4348	29	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	11.3624762858691	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTTCCCTTATTTTGA	NA	False	NA	13	True	ATTAAA	-21	NA	158771428	158906347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902720_158904641_158904755_158905357_158905459_158905529_158905607_158905922
ENSMUST00000033671.13	chrX	+	2740	22	FSM	ENSMUSG00000031309.16	ENSMUST00000033671.13	7244	22	0	4504	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.5162932360936	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCACCTAAAATACACTGAA	NA	False	NA	-26	True	AATAAA	-19	NA	158038853	158146736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158039185_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ENSMUST00000033673.7	chrX	+	2562	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	0	0	0	0	multi-exon	FALSE	canonical	3	3075	junction_4	297.011255595496	4250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473160	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUST00000033683.8	chrX	-	975	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	0	0	0	0	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	2788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101233000	101228546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ENSMUST00000033683.8-0	chrX	-	917	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	58	0	0	0	multi-exon	FALSE	canonical	3	11043	junction_6	2028.67992108716	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232942	101228546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ENSMUST00000033695.6	chrX	-	5667	16	FSM	ENSMUSG00000031333.8	ENSMUST00000033695.6	5667	16	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_7	23.4516997725585	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCTGGTGGAAATCA	9861	False	NA	-2	True	AATAAA	-24	NA	103457452	103324262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103366939_103367060_103386099_103386187_103388530_103388609_103457262
ENSMUST00000033699.13	chrX	-	8312	47	FSM	ENSMUSG00000031328.17	ENSMUST00000033699.13	8312	47	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_19	126.416146359915	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGTCCTATGTACAACC	NA	False	NA	-83	True	NA	NA	NA	73290161	73267146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUST00000033700.12	chrX	+	3316	15	FSM	ENSMUSG00000031337.17	ENSMUST00000033700.12	3316	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	89.0701683952556	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAATATATTAACTAAA	NA	False	NA	-14	True	AATAAA	-18	NA	70258644	70358871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339954_70343171_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ENSMUST00000033713.11	chrX	-	1026	4	FSM	ENSMUSG00000031347.13	ENSMUST00000033713.11	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_2	29.9146935282461	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCATTCTTTAAAGGAT	NA	False	NA	-13	True	AATAAA	-17	NA	71960462	71957309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293
ENSMUST00000033715.5	chrX	+	2168	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTTGTGTTGCTGGCT	NA	False	NA	NA	False	AATAAA	-6	NA	71962162	72002120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUST00000033715.5-0	chrX	+	1731	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	53	384	53	-384	multi-exon	FALSE	canonical	3	334	junction_6	28.7537042866494	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCACAGACTCTGGTGTG	NA	False	NA	12	True	CATAAA	-12	NA	71962215	72001736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUST00000033717.9	chrX	-	2320	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_6	111.381351920129	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	168103276	168094525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
ENSMUST00000033720.12	chrX	+	2244	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	0	0	0	0	multi-exon	FALSE	canonical	3	2711	junction_3	173.446540695797	2435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATATCTGCATCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	161543397	161562088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUST00000033723.4	chrX	-	2087	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	15.2105021284637	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTATAGAATGGTCTT	NA	False	NA	NA	False	TATAAA	-15	NA	161671443	161640052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
ENSMUST00000033727.14	chrX	+	3353	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	0	0	0	0	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGCAGACTTGTACTT	NA	False	NA	NA	False	AATAAA	-22	NA	161684627	161815504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUST00000033727.14-0	chrX	+	2191	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	-27	1189	0	0	multi-exon	FALSE	canonical	2	133	junction_1	30.7828415409191	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGGGCCCGGCAGAAAGT	NA	False	NA	11	True	ATTAAA	-17	NA	161684600	161814315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUST00000033731.4	chrX	+	6376	6	FSM	ENSMUSG00000031365.14	ENSMUST00000033731.4	6376	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	13.9226434271657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386226	72402686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395530_72396441_72396544_72396826
ENSMUST00000033734.14	chrX	+	1785	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	61.936963923008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTGGTGTGCTTTTC	NA	False	NA	2	True	AATAAA	-9	NA	162692137	162716355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
ENSMUST00000033737.15	chrX	-	1380	10	FSM	ENSMUSG00000031371.15	ENSMUST00000033737.15	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_3	42.8281089190294	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	False	NA	-12	True	AATAAA	-17	NA	72502650	72480920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUST00000033749.9	chrX	+	1599	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTGCTTTTTTATATG	NA	False	NA	NA	False	TATAAA	-15	NA	163052426	163156007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUST00000033749.9-0	chrX	+	1233	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	142	224	0	-224	multi-exon	FALSE	canonical	3	253	junction_3	17.8270151493682	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTTGTAATGAAT	NA	False	NA	NA	False	AATAAA	-23	NA	163052568	163155783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUST00000033754.15	chrX	+	3594	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	38.4052079801685	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTCAGTTTGTCTT	NA	False	NA	28	True	AATAAA	-28	NA	163202782	163216912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ENSMUST00000033761.13	chrX	-	8138	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_17	65.7475900699029	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATTTACCCGTGTGT	NA	False	NA	-10	True	ATTAAA	-23	NA	73009963	72986397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ENSMUST00000033769.15	chrX	-	2890	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	119.77847324566	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGACTGCTAGCTACAC	NA	False	NA	NA	False	NA	NA	NA	73067519	73058576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUST00000033769.15-0	chrX	-	3853	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	82	-1045	0	0	multi-exon	FALSE	canonical	3	23	junction_4	119.77847324566	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067437	73057531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUST00000033770.13	chrX	-	1739	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	51.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTAGAGTTTCGTGGC	NA	False	NA	NA	False	AATAAA	-22	NA	73129296	73078893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73080101_73080587_73080939_73129115
ENSMUST00000033775.9	chrX	-	1982	12	FSM	ENSMUSG00000031402.13	ENSMUST00000033775.9	2525	12	0	543	0	372	multi-exon	FALSE	canonical	3	210	junction_6	19.4626151487859	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGTGACCCTGTAACTC	NA	False	NA	-8	True	AATAAA	-19	NA	74174622	74153881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ENSMUST00000033776.15	chrX	+	2804	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	0	0	0	0	multi-exon	FALSE	canonical	3	1536	junction_9	499.509294922813	2195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139459	74153383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUST00000033805.15	chrX	-	1430	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_1	39.0024037720754	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCCCAATTTCTCATTC	NA	False	NA	-8	True	AATAAA	-11	NA	139857438	139849177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ENSMUST00000033809.4	chrX	+	1965	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	1771	junction_6	191.019850626403	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357361	139376889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUST00000033811.14	chrX	-	4412	16	FSM	ENSMUSG00000031434.16	ENSMUST00000033811.14	4412	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	16.9972546802908	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGGTAGCAGGGGAAAT	NA	False	NA	72	True	AATAAA	-24	NA	138772403	138722380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758645_138759547_138759766_138765243_138765377_138771818_138771892_138772020
ENSMUST00000033818.10	chr8	+	7549	30	FSM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_29	16.4441186100344	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	1	True	ATTAAA	-15	NA	12807013	12918728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
ENSMUST00000033818.10-0	chr8	+	5105	30	FSM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	55	2389	0	769	multi-exon	FALSE	canonical	3	17	junction_29	16.4441186100344	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTGCTTGAACTGG	NA	False	NA	NA	False	NA	NA	NA	12807068	12916339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
ENSMUST00000033824.8	chr8	+	2229	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	0	0	0	0	multi-exon	FALSE	canonical	3	2416	junction_1	214.397848636594	3437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTGTCCTTCTGTGAC	8202	False	NA	21	True	AATAAA	-22	NA	13209160	13225338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ENSMUST00000033825.11	chr8	-	1372	7	FSM	ENSMUSG00000031448.13	ENSMUST00000033825.11	1372	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTCCTCACCTTCTCA	2498	False	NA	NA	False	TATAAA	-20	NA	13304162	13285654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13285989_13292251_13292385_13292518_13292647_13295468_13295610_13296041_13296168_13298552_13298718_13303817
ENSMUST00000033828.7	chr8	-	2548	15	FSM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	9.27719389312373	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTGGTCACTGTCT	5760	False	NA	1	True	AATAAA	-23	NA	13544490	13515373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524847_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533737_13535670_13535696_13543845_13544013_13544260
ENSMUST00000033839.9	chr8	-	793	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	307.613393726606	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTATGCTCTGTCTGCG	NA	False	NA	-8	True	AATAAA	-16	NA	13940268	13934793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
ENSMUST00000033866.9	chr8	+	3574	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_5	36.370219952707	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGAATTTTTCTGTTTT	NA	False	NA	9	True	GATAAA	-22	NA	22682824	22710859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUST00000033866.9-0	chr8	+	1363	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	0	2211	0	0	multi-exon	TRUE	canonical	3	316	junction_5	36.370219952707	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGGTCTCAGAAACT	NA	False	NA	22	True	TATAAA	-17	NA	22682824	22708648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUST00000033871.8	chr8	-	3430	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	26.1002341411379	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTCTGGTCGTAGTGT	NA	False	NA	-6	True	NA	NA	NA	22888613	22865566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ENSMUST00000033873.9	chr8	+	4838	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_9	30.3309568287708	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTTTTCATTGTTGT	NA	False	NA	NA	False	NA	NA	NA	27513826	27530356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ENSMUST00000033875.10	chr8	+	3603	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCGTGTGGGTGTTT	NA	False	NA	25	True	AATAAA	-17	NA	27532582	27546160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ENSMUST00000033875.10-0	chr8	+	1995	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	43	1565	0	0	multi-exon	FALSE	canonical	3	235	junction_4	11.5881713089561	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGTGTGATGAGTGAAT	NA	False	NA	13	True	ATTAAA	-15	NA	27532625	27544595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ENSMUST00000033877.6	chr8	-	1899	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACCAGAGCTTTTAAA	NA	False	NA	-26	True	ATTAAA	-35	NA	27618708	27613391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
ENSMUST00000033877.6-0	chr8	-	1431	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	0	468	0	373	multi-exon	FALSE	canonical	3	75	junction_1	8.9938250421547	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATGACTCTTGGCTTT	NA	False	NA	NA	False	NA	NA	NA	27618708	27613859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
ENSMUST00000033878.14	chr8	-	3217	5	FSM	ENSMUSG00000031488.15	ENSMUST00000033878.14	3217	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	8.6421930087218	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAGAGTCGGTCTCTC	NA	False	NA	NA	False	TTTAAA	-4	NA	27664674	27631985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27633423_27640722_27640832_27644173_27644964_27646254_27646698_27664236
ENSMUST00000033880.7	chr8	+	1997	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	0	0	0	0	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATTGGTTCCCAGTGG	NA	False	NA	15	True	NA	NA	NA	27750356	27766702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_27750579_27763350_27763531_27765107
ENSMUST00000033880.7-0	chr8	+	821	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	0	1176	0	0	multi-exon	FALSE	canonical	3	14377	junction_1	319.5	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACATTTACCCTAGGC	NA	False	NA	0	True	NA	NA	NA	27750356	27765526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_27750579_27763350_27763531_27765107
ENSMUST00000033898.10	chr8	-	6615	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTTTATTTTGTATG	NA	False	NA	NA	False	AATAAA	-26	NA	11362826	11248422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ENSMUST00000033898.10-0	chr8	-	5440	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	79	1096	-58	0	multi-exon	FALSE	canonical	3	33	junction_49	11.4163456879082	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCAATCCAGTGCACTG	NA	False	NA	NA	False	AATAAA	-13	NA	11362747	11249518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ENSMUST00000033899.14	chr8	+	6450	48	FSM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_4	6.83737233737166	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTCTGTCCCCCGA	8480	False	NA	10	True	AATAAA	-20	NA	11362804	11499287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11363115_11363418_11363508_11363629_11363685_11404276_11404358_11448661_11448797_11449703_11449749_11451147_11451265_11452162_11452235_11452983_11453020_11453341_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ENSMUST00000033900.7	chr8	-	1392	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTCTTGGGAATGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	11528710	11503517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11504527_11528327
ENSMUST00000033901.11	chr8	+	1359	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	63.9388210675343	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547567	11563287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUST00000033905.13	chr8	-	2285	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	111.790876193006	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685754	11661583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUST00000033910.9	chr8	-	2879	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTGTGGGTGTTTT	8786	False	NA	-4	True	AATAAA	-16	NA	34614187	34602725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUST00000033910.9-0	chr8	-	679	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	239	1961	239	-1961	multi-exon	FALSE	canonical	3	354	junction_3	12.9614813968157	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTGGTTTCCCACTT	9025	False	NA	-3	True	ATTAAA	-22	NA	34613948	34604686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUST00000033913.11	chr8	-	919	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	333	-3	0	0	multi-exon	FALSE	canonical	3	293	junction_6	39.9485780584101	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	0	True	AATAAA	-31	NA	34575617	34557573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
ENSMUST00000033919.6	chr8	+	2263	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	-461	647	-461	-647	multi-exon	FALSE	canonical	3	36	junction_4	8.69386757049665	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGAAGTTCAGTCTT	560	False	NA	NA	False	AATAAA	-17	NA	54530179	54639484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
ENSMUST00000033920.6	chr8	+	1181	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	34.8440723079264	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGACATTATGGAATGT	NA	False	NA	-61	True	NA	NA	NA	53964761	53976373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ENSMUST00000033923.14	chr8	-	6159	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	11.0077971289962	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACACTGATTGAATTT	NA	False	NA	-13	True	NA	NA	NA	37081097	37034904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ENSMUST00000033927.8	chr8	-	3095	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	0	1984	0	-1984	multi-exon	FALSE	canonical	3	346	junction_2	28.274939827031	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCTCATTGGCATTGCC	NA	False	NA	-9	True	ATTAAA	-22	NA	35962687	35934390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ENSMUST00000033929.6	chr8	-	9163	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_19	17.0294297993192	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTGTAGCATTCAGC	NA	False	NA	-17	True	AATAAA	-15	NA	35432844	35293613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ENSMUST00000033930.5	chr8	+	2740	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGCCTCCTAAAAGTC	NA	False	NA	NA	False	AATAAA	-19	NA	35274450	35287048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
ENSMUST00000033930.5-0	chr8	+	1826	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	0	914	0	-914	multi-exon	FALSE	canonical	3	23	junction_3	1.63299316185545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATAAGCAATAACGGCG	NA	False	NA	NA	False	ATTAAA	-22	NA	35274450	35286134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
ENSMUST00000033933.8	chr8	+	1860	6	FSM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	37.2633868562695	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTTGTTCTTTGTACT	NA	False	NA	9	True	AATAAA	-16	NA	34621729	34637975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ENSMUST00000033934.5	chr8	+	1515	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_2	48.7100263463968	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTTGTGTAATTTGC	NA	False	NA	NA	False	NA	NA	NA	22901376	22919681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUST00000033935.16	chr8	-	1402	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCCTTGCATCATTTTG	NA	False	NA	-1	True	NA	NA	NA	22966898	22952630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
ENSMUST00000033935.16-0	chr8	-	988	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	27	387	0	-387	multi-exon	FALSE	canonical	3	179	junction_1	20.3960780543711	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGGGGTAGTTTGCTC	NA	False	NA	0	True	ATTAAA	-14	NA	22966871	22953017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
ENSMUST00000033938.7	chr8	-	1201	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_8	16.1157058899497	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTTAACAAATGTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	23143434	23118141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ENSMUST00000033939.13	chr8	-	3147	22	FSM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	-11	444	0	112	multi-exon	FALSE	canonical	3	43	junction_1	18.670796433355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTCTATTTTTTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	23196605	23149671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ENSMUST00000033941.7	chr8	+	2525	14	FSM	ENSMUSG00000031538.7	ENSMUST00000033941.7	2525	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.12619614785927	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGTGCATATCCATG	NA	False	NA	NA	False	AATAAA	-24	NA	23247762	23272860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_23247845_23257095_23257184_23258461_23258505_23261709_23261848_23262221_23262333_23262651_23262827_23263632_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
ENSMUST00000033950.7	chr8	-	1349	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCAAATGTCTTTTTTT	NA	False	NA	-22	True	AAAACA	-3	NA	23727675	23716631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ENSMUST00000033950.7-0	chr8	-	1139	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	0	210	0	-210	multi-exon	FALSE	canonical	3	605	junction_1	23.2914103462707	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACTACTTACTGAG	NA	False	NA	-1	True	AATAAA	-26	NA	23727675	23716841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ENSMUST00000033952.8	chr8	+	4372	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	0	0	0	0	multi-exon	FALSE	canonical	3	1172	junction_2	95.5	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGAGTTGTGATTGAC	NA	False	NA	24	True	ACTAAA	-17	NA	23901517	23939648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_23902345_23907345_23907424_23936181
ENSMUST00000033961.7	chr8	+	1281	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	26.3185612575358	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGAGTATTTC	NA	False	NA	14	True	AATAAA	-14	NA	25507226	25513276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ENSMUST00000033966.13	chr8	+	2072	6	FSM	ENSMUSG00000031562.17	ENSMUST00000033966.14	2072	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	152.941034389074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563047	48594698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_48563317_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUST00000033973.14	chr8	+	2921	8	FSM	ENSMUSG00000031568.17	ENSMUST00000033973.14	2921	8	0	0	0	0	multi-exon	FALSE	canonical	2	108	junction_6	33.1305395830075	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTATATGTTTTGT	NA	False	NA	7	True	AATAAA	-17	NA	47986698	48005860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48001006_48001010_48003729
ENSMUST00000033975.9	chr8	-	4246	18	FSM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_17	11.1150012413475	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGGCCTTATCTATC	NA	False	NA	-3	True	AATAAA	-22	NA	26244308	26215372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
ENSMUST00000033983.6	chr8	-	1902	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_2	38.8285245790727	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	False	NA	-2	True	TATAAA	-20	NA	31658792	31649490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUST00000033990.7	chr8	-	5019	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	7.07885533384216	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTTCTTGGTAAACTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	33875500	33725709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ENSMUST00000033991.13	chr8	-	6262	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033991.13	6262	34	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_33	8.54201521159467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCCTCAGATATGAT	NA	False	NA	NA	False	NA	NA	NA	33875555	33724411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
ENSMUST00000033992.9	chr8	+	2673	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_4	147.314360580811	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCAGTGTATTTTC	402	False	NA	14	True	TATAAA	-17	NA	34143265	34188191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ENSMUST00000033994.15	chr8	-	2375	8	FSM	ENSMUSG00000031586.18	ENSMUST00000033994.15	2375	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	606.753118606551	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATGATTTGTCTGACA	NA	False	NA	NA	False	AATAAA	-15	NA	34419834	34272674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUST00000033995.14	chr8	-	1039	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	404.856524654791	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACAGCGTTTTTGGTT	NA	False	NA	-7	True	AATAAA	-36	NA	34419833	34293966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUST00000033999.8	chr8	-	1039	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	88.4737778949221	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTCTCGAGTCCTTT	NA	False	NA	-7	True	AATAAA	-23	NA	41870111	41850495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ENSMUST00000034000.15	chr8	-	2773	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTTTTTAAATAACTT	7501	False	NA	NA	False	NA	NA	NA	41827810	41793233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUST00000034000.15-0	chr8	-	2171	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	138	464	0	0	multi-exon	FALSE	canonical	3	999	junction_6	169.669117600863	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGTCATGCATGCTG	7639	False	NA	-21	True	AATAAA	-18	NA	41827672	41793697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUST00000034012.10	chr8	-	2615	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	67.4388612003495	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGTGACTGATGGCTT	NA	False	NA	-1	True	AATAAA	-23	NA	40964795	40945580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ENSMUST00000034015.11	chr8	-	2044	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_2	21.3822356174466	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	-17	True	AATAAA	-1	NA	65186826	65171172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ENSMUST00000034017.9	chr8	-	3412	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_10	38.1758150815782	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGGGAGTTGTTCTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	65302669	65192708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ENSMUST00000034021.12	chr8	-	4313	12	FSM	ENSMUSG00000031608.14	ENSMUST00000034021.12	4313	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	43.6895509190027	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTTTCAGTGCTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	58106065	57976861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995545_57995729_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ENSMUST00000034022.4	chr8	-	1178	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_3	52.2961651451508	957	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGCTTCAGCCTGTTT	NA	False	NA	97	True	AATAAA	-14	NA	57940894	57935740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
ENSMUST00000034026.10	chr8	+	1683	7	FSM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3.18416219575713	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAATTGCCTATTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	56747619	56774078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
ENSMUST00000034030.15	chr8	-	2678	10	FSM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	10.9927024053615	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337282	78322610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ENSMUST00000034045.15	chr8	+	2931	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGATACTATTTTAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	47005062	47033042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUST00000034045.15-0	chr8	+	1522	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	41	1368	0	261	multi-exon	FALSE	canonical	3	263	junction_11	27.7942589995368	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAATGATCCTGGTTA	NA	False	NA	11	True	AATAAA	-27	NA	47005103	47031674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUST00000034046.13	chr8	+	3897	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_9	34.1571368823559	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTTTCAAGTGCCTT	2206	False	NA	17	True	AATAAA	-26	NA	46924073	46989088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUST00000034049.5	chr8	-	1925	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	0	0	0	0	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGTTTGGGCTGGAA	NA	False	NA	NA	False	TATAAA	-13	NA	46664321	46659833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ENSMUST00000034049.5-1	chr8	-	1294	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	254	377	0	-377	multi-exon	FALSE	canonical	3	7531	junction_1	145.363911156334	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATCTCCCTGCCCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	46664067	46660210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ENSMUST00000034051.7	chr8	+	1640	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_6	20.6765727613893	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTAGTCATGTAAATAC	8860	False	NA	104	True	AGTAAA	-19	NA	46428564	46449995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUST00000034058.14	chr8	+	4309	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCCTCCTCCTCTCT	2566	False	NA	NA	False	ATTAAA	-29	NA	61940767	61959728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
ENSMUST00000034058.14-0	chr8	+	1096	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	1	3212	0	93	multi-exon	FALSE	canonical	3	156	junction_4	10.8483869768736	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACTGTTGCTAAGAGTAT	2567	False	NA	14	True	ATTAAA	-14	NA	61940768	61956516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
ENSMUST00000034060.7	chr8	+	5479	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	7.49876022810956	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGCCCTTTTTTTTTTA	NA	False	NA	7	True	ATTAAA	-18	NA	61676905	61849105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ENSMUST00000034065.14	chr8	+	5401	33	FSM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_16	13.1719028024618	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	9	True	NA	NA	NA	61446228	61584380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ENSMUST00000034074.8	chr8	-	6469	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGAGGGTGGTGCTT	NA	False	NA	-8	True	NA	NA	NA	87611886	87567766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ENSMUST00000034074.8-0	chr8	-	3289	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	0	3180	0	0	multi-exon	FALSE	canonical	3	315	junction_2	32.4790530786981	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGAGTTGCTTCCTT	NA	False	NA	NA	False	AATAAA	-23	NA	87611886	87570946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ENSMUST00000034079.14	chr8	+	3251	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_7	19.6926641267291	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGTCATACAGATT	NA	False	NA	NA	False	AATAAA	-16	NA	88864482	88898655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ENSMUST00000034085.8	chr8	-	3625	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	0	0	0	0	multi-exon	TRUE	canonical	3	463	junction_12	36.2439650148821	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89088822	89057686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ENSMUST00000034085.8-1	chr8	-	2370	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	0	1255	0	473	multi-exon	FALSE	canonical	3	463	junction_12	36.2439650148821	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGTGTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	89088822	89058941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ENSMUST00000034086.13	chr8	+	1754	10	FSM	ENSMUSG00000031661.13	ENSMUST00000034086.13	3035	10	0	1281	0	0	multi-exon	FALSE	canonical	2	13	junction_7	4.46661138716484	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGTAACTCACCAAGAAG	NA	False	NA	NA	False	AGTAAA	-24	NA	89247981	89318965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_89248160_89248274_89248308_89248914_89249049_89300825_89300893_89309830_89309938_89311781_89311878_89315781_89315930_89316355_89316441_89317350_89317479_89318187
ENSMUST00000034087.9	chr8	-	1699	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGCAGGATGGAGAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	89362756	89353190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
ENSMUST00000034087.9-0	chr8	-	1408	4	FSM	ENSMUSG00000031662.9	ENSMUST00000034087.9	1699	4	27	264	0	-264	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTGAGACTCCAT	NA	False	NA	1	True	AATAAA	-28	NA	89362729	89353454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_89354456_89356541_89356694_89358396_89358536_89362613
ENSMUST00000034090.8	chr8	-	5265	4	FSM	ENSMUSG00000031665.8	ENSMUST00000034090.8	5265	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	110.426446107805	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTGTGTTTGTAGAG	NA	False	NA	NA	False	GATAAA	-9	NA	89770790	89753862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_89755447_89756571_89760027_89768979_89769073_89770657
ENSMUST00000034091.8	chr8	+	4925	22	FSM	ENSMUSG00000031666.16	ENSMUST00000034091.8	4925	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	4.6442610819949	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGTTTAGTTATATTG	NA	False	NA	NA	False	AATAAA	-15	NA	91796684	91850472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ENSMUST00000034093.15	chr6	+	4513	17	FSM	ENSMUSG00000031668.15	ENSMUST00000034093.15	4513	17	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	9.41408519188137	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGACTCTTATTTTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	70821498	70882229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
ENSMUST00000034094.11	chr8	+	2519	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	2	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTTGTCACTAACTG	NA	False	NA	NA	False	AATAAA	-14	NA	96360080	96371688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_96360412_96364437_96364672_96369734
ENSMUST00000034096.6	chr8	+	1707	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_4	62.8342175004105	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAACTTTCTTTAGCAC	NA	False	NA	39	True	AATAAA	-26	NA	96442508	96445638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ENSMUST00000034097.8	chr8	-	2530	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	94.2456731822753	1104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTCTGCTTTTCTACT	NA	False	NA	-4	True	AATAAA	-17	NA	96615175	96590761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUST00000034111.10	chr8	+	3595	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	15.4524062690615	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79235996	79460632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ENSMUST00000034115.5	chr8	-	3204	2	FSM	ENSMUSG00000031688.5	ENSMUST00000034115.5	3204	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGTTTTTAATCATTT	NA	False	NA	NA	False	ATTAAA	-35	NA	79163274	79159638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79162308_79162739
ENSMUST00000034121.11	chr8	+	3822	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_7	31.1019422681999	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACACACCTAAAAGG	NA	False	NA	NA	False	NA	NA	NA	85809943	85824911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ENSMUST00000034131.10	chr8	-	3474	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	0	0	0	0	multi-exon	FALSE	canonical	3	1260	junction_3	108.704875695619	2314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	86026431	85987020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ENSMUST00000034132.13	chr8	+	1287	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_2	81.7626986399598	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026419	86034700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUST00000034136.12	chr8	+	3639	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	271.645643020279	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	False	NA	13	True	AATAAA	-19	NA	86219204	86254189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUST00000034138.7	chr8	-	2919	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCAGCATTCTTCAGT	NA	False	NA	NA	False	AATAAA	-15	NA	86281973	86264261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUST00000034138.7-0	chr8	-	1919	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	0	1000	0	-1000	multi-exon	FALSE	canonical	3	694	junction_1	52.4486355875918	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTATTCTGTGTCACAT	NA	False	NA	-8	True	AATAAA	-13	NA	86281973	86265261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUST00000034140.9	chr8	-	3306	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	0	0	0	0	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACGCTGTGGCAAG	NA	False	NA	-21	True	AATAAA	-13	NA	86567550	86444206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ENSMUST00000034140.9-1	chr8	-	2213	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	132	961	132	-961	multi-exon	FALSE	canonical	1	110	junction_3	53.6212528231601	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCCAGGGCGTTGTT	NA	False	NA	-26	True	AATAAA	-15	NA	86567418	86445167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ENSMUST00000034141.18	chr8	+	2859	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_5	34.038693468775	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCTGGTCTCCAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	87350671	87443259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUST00000034147.4	chr8	-	1675	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	43.069567612422	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500789	83490249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ENSMUST00000034150.10	chr8	-	4870	10	FSM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	135.607913385759	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGAGCTGTGTTACT	NA	False	NA	-9	True	AATAAA	-15	NA	81607125	81491068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
ENSMUST00000034159.8	chr8	+	1890	4	FSM	ENSMUSG00000031723.9	ENSMUST00000034159.8	1890	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	19.3045763140937	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGTTGTCTGTCCATC	NA	False	NA	15	True	AATAAA	-24	NA	110292523	110300683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110292696_110295521_110295730_110298002_110298155_110299325
ENSMUST00000034164.6	chr8	-	2304	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_2	71.0226880807973	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419892	110397956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUST00000034171.9	chr8	+	3692	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTCCCACATTGTACTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110505537	110587990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUST00000034171.9-1	chr8	+	6798	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-260	-2846	92	0	multi-exon	FALSE	canonical	3	143	junction_1	23.6531408988355	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAACTTTGCTGCCTTGC	NA	False	NA	16	True	AATAAA	-18	NA	110505277	110590836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUST00000034187.9	chr8	+	3078	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	5.63964143856288	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGCTCTGTTTTAGC	NA	False	NA	4	True	AATAAA	-19	NA	93553918	93580048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ENSMUST00000034190.11	chr8	+	3069	19	FSM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_15	41.1869046070606	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7361	False	NA	16	True	AATAAA	-20	NA	111345230	111447030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ENSMUST00000034197.5	chr8	+	4396	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	8.28653526310404	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACCAAA	3037	False	NA	NA	False	ACTAAA	-30	NA	111646553	111699112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ENSMUST00000034203.17	chr8	+	2737	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_8	32.668367302671	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTGTGTTGGGTCCAG	9628	False	NA	13	True	AATAAA	-18	NA	111573665	111608859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUST00000034204.11	chr8	-	5010	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	0	0	0	0	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTGTTTGGGATAT	NA	False	NA	NA	False	AATAAA	-17	NA	94763659	94742123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ENSMUST00000034204.11-0	chr8	-	1101	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	0	3909	0	0	multi-exon	FALSE	canonical	3	2190	junction_4	118.898649651242	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGAGGATCCTTTTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	94763659	94746032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ENSMUST00000034205.5	chr8	+	1768	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	41.3065540194129	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCAGTTCCTTTGGATG	NA	False	NA	8	True	AATAAA	-16	NA	117648478	117668242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUST00000034206.6	chr8	-	2638	17	FSM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	426	0	426	0	multi-exon	FALSE	canonical	1	2	junction_15	7.54569413639329	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTTGTTTATAAATT	NA	False	NA	-3	True	AATAAA	-15	NA	94825130	94794581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819022_94819251_94824863
ENSMUST00000034214.8	chr8	+	511	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	13494	junction_2	132	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCTGTGCATTGGT	NA	False	NA	37	True	AATAAA	-23	NA	94899291	94900196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94899504_94899754_94899821_94899963
ENSMUST00000034214.8-0	chr8	+	387	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	120	4	-76	0	multi-exon	FALSE	canonical	3	13494	junction_2	132	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCTTGTCTCTGTGCAT	NA	False	NA	33	True	AATAAA	-19	NA	94899411	94900192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94899504_94899754_94899821_94899963
ENSMUST00000034215.8	chr8	+	549	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905709	94906955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94905967_94906450_94906517_94906729
ENSMUST00000034215.8-0	chr8	+	390	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	159	0	0	0	multi-exon	FALSE	canonical	3	14682	junction_2	74.5	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905868	94906955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94905967_94906450_94906517_94906729
ENSMUST00000034220.8	chr8	+	1873	8	FSM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	160.784175279808	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGACTCCCATTGTCC	NA	False	NA	28	True	AATAAA	-21	NA	95113122	95121986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ENSMUST00000034226.8	chr8	-	2873	8	FSM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	171.915855070118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTTGTCACTGTT	3590	False	NA	NA	False	NA	NA	NA	95328625	95300765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUST00000034226.8-0	chr8	-	1796	8	FSM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	271	806	0	713	multi-exon	FALSE	canonical	0	0	junction_3	171.915855070118	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3861	False	NA	-8	True	AATAAA	-19	NA	95328354	95301571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUST00000034227.6	chr8	-	1324	4	FSM	ENSMUSG00000031775.6	ENSMUST00000034227.6	1926	4	50	552	50	265	multi-exon	FALSE	canonical	2	4	junction_3	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGGGTTATCATTCCT	467	False	NA	-2	True	AATAAA	-18	NA	95422856	95402073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95402908_95403853_95403977_95405972_95406147_95422663
ENSMUST00000034228.16	chr8	+	2063	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	11.4612390255155	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	False	NA	12	True	AGTAAA	-25	NA	95393227	95401053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ENSMUST00000034230.7	chr8	+	3315	3	FSM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGAACTTTTCTCTGGG	2179	False	NA	NA	False	AATAAA	-24	NA	95498636	95509055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95498963_95504655_95504777_95506187
ENSMUST00000034233.15	chr8	-	1807	9	FSM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_8	506.411394026635	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564893	95549188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
ENSMUST00000034234.15	chr8	+	1789	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	12.7322179921646	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTTGTTTTGTCTAT	NA	False	NA	9	True	AATAAA	-15	NA	95564948	95581523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ENSMUST00000034239.9	chr8	+	2528	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	97	1152	97	-1152	multi-exon	FALSE	canonical	3	123	junction_1	16.4357221924964	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTTATGAGAGGAATAT	906	False	NA	14	True	ATTAAA	-18	NA	95807910	95825687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ENSMUST00000034240.15	chr8	-	3277	20	FSM	ENSMUSG00000031788.15	ENSMUST00000034240.15	3277	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	24.0325264354334	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	NA	False	NA	-4	True	ATTAAA	-21	NA	95869175	95826455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
ENSMUST00000034243.7	chr8	+	5135	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	7.43531778858738	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTCAGGAAGGTACAGG	NA	False	NA	NA	False	NA	NA	NA	96078895	96101708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
ENSMUST00000034244.9	chr8	+	2124	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	8.51821577561874	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTTTTTCTTTATTCA	NA	False	NA	NA	False	AATAAA	-18	NA	73325916	73341126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
ENSMUST00000034245.16	chr8	+	1758	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	19.6185852927495	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96058911	96074135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
ENSMUST00000034249.8	chr8	-	1295	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_1	23.7200337267888	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	-6	True	AATAAA	-24	NA	96161497	96146876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUST00000034260.9	chr8	-	3055	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	27	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTGTCTATTGTGCAC	8521	False	NA	NA	False	NA	NA	NA	72154433	72143399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_72145800_72145960_72146544_72154361
ENSMUST00000034260.9-0	chr8	-	2601	3	FSM	ENSMUSG00000031803.9	ENSMUST00000034260.9	3055	3	0	454	0	-454	multi-exon	FALSE	canonical	3	105	junction_2	27	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	8521	False	NA	-3	True	NA	NA	NA	72154433	72143853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_72145800_72145960_72146544_72154361
ENSMUST00000034264.11	chr8	+	893	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_2	58.7132864009502	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTCTGTGGTTCTT	NA	False	NA	15	True	ATTAAA	-15	NA	72044819	72048913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
ENSMUST00000034270.17	chr8	+	1702	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	116	714	0	0	multi-exon	FALSE	canonical	3	2350	junction_2	129.422649571944	801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGTGATGTCTCATTG	9961	False	NA	16	True	AATAAA	-16	NA	122317215	122324785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ENSMUST00000034272.9	chr8	+	1062	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	32.3177582762171	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGAGTGTATTGTTTT	NA	False	NA	11	True	AGTAAA	-18	NA	71995573	72000670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ENSMUST00000034276.13	chr8	+	745	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121394960	121400946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUST00000034276.13-0	chr8	+	659	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	86	0	0	0	multi-exon	FALSE	canonical	3	8115	junction_1	456.952609687263	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395046	121400946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUST00000034277.14	chr8	-	4942	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTCTCTGTGTTCATC	NA	False	NA	0	True	AATAAA	-23	NA	121394860	121380652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
ENSMUST00000034277.14-0	chr8	-	989	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	34	3919	0	0	multi-exon	FALSE	canonical	3	1135	junction_3	55.4301362076623	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	False	NA	-22	True	ATTAAA	-29	NA	121394826	121384571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
ENSMUST00000034278.6	chr8	-	990	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	270	2640	0	271	multi-exon	FALSE	canonical	3	1091	junction_3	31.7125763696361	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGTACACTTAGAACG	NA	False	NA	82	True	AATACA	-9	NA	121315773	121308011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ENSMUST00000034280.9	chr8	-	3069	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	9.07114735222145	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGACCTCCTTCAGC	NA	False	NA	NA	False	AATAAA	-19	NA	120828221	120807628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
ENSMUST00000034285.14	chr8	-	1596	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	12.9185482500507	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGAGTTGGGTTGTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	120567283	120535960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
ENSMUST00000034287.10	chr8	+	2181	5	FSM	ENSMUSG00000031828.10	ENSMUST00000034287.10	2181	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	6.86931583201704	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGTTTGAATACTTACA	NA	False	NA	NA	False	ATTAAA	-24	NA	120589010	120603734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120589187_120591741_120591819_120596360_120597432_120601113_120601272_120603035
ENSMUST00000034296.15	chr8	-	3165	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_15	21.8259784049498	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTTGGGGACTGG	NA	False	NA	-8	True	NA	NA	NA	71229357	71220819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ENSMUST00000034300.8	chr8	+	1208	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAGAATGGTGTGGTC	NA	False	NA	NA	False	AATAAA	-18	NA	120071226	120075661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
ENSMUST00000034300.8-0	chr8	+	515	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	28	665	0	-86	multi-exon	FALSE	canonical	0	0	junction_2	885.438121308692	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTGTCAAACGTTTTA	NA	False	NA	23	True	ATTAAA	-26	NA	120071254	120074996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
ENSMUST00000034301.12	chr8	+	1363	5	FSM	ENSMUSG00000031840.15	ENSMUST00000034301.12	1363	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	7.43303437365925	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACGCAGTCCTTGACAT	NA	False	NA	46	True	NA	NA	NA	71207359	71211281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71207513_71208502_71208731_71209093_71209213_71209783_71209909_71210543
ENSMUST00000034303.3	chr8	-	1068	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	47.4572175754121	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGAAGTAATTTTAG	NA	False	NA	-12	True	AATAAA	-22	NA	118528682	118518383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
ENSMUST00000034311.15	chr8	+	925	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71125897	71131402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ENSMUST00000034311.15-0	chr8	+	794	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	131	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	310.191070148707	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ENSMUST00000034313.13	chr8	+	1155	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.4388056723169	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGAGTCCTTGTGTGGG	NA	False	NA	23	True	AATAAA	-31	NA	126460941	126474974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
ENSMUST00000034326.7	chr8	+	3915	26	FSM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	0	0	0	0	multi-exon	TRUE	canonical	3	203	junction_10	47.3625337160081	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9164	False	NA	NA	False	AATAAA	-23	NA	70243812	70260399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ENSMUST00000034328.13	chr8	+	4201	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_4	79.6960779696843	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGGCCTAATGCCATGT	NA	False	NA	NA	False	AATAAA	-26	NA	69246580	69282062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ENSMUST00000034342.13	chr8	+	667	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	21.1397466609439	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGCAGATCTCCTT	4792	False	NA	10	True	ATTAAA	-22	NA	104977492	104990079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
ENSMUST00000034342.13-0	chr8	+	595	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	69	3	0	0	multi-exon	FALSE	canonical	3	233	junction_3	21.1397466609439	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTTCTGCAGATCTC	4861	False	NA	7	True	ATTAAA	-19	NA	104977561	104990076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
ENSMUST00000034343.5	chr8	+	1616	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	6.68954408012983	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGAGTGCGCCTGACT	NA	False	NA	13	True	ATTAAA	-15	NA	105067225	105074304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ENSMUST00000034349.10	chr8	-	1808	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_15	52.7352662859429	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3333	False	NA	NA	False	AATAAA	-19	NA	105261269	105237659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUST00000034359.10	chr8	-	1689	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTGCACGCCTTTAAT	505	False	NA	NA	False	AAAACA	-43	NA	105991241	105984917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
ENSMUST00000034359.10-0	chr8	-	1396	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	6	287	0	-287	multi-exon	FALSE	canonical	3	50	junction_4	9.66953980290686	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGCGGAGATGCTGAG	511	False	NA	-10	True	AATAAA	-16	NA	105991235	105985204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
ENSMUST00000034361.10	chr8	+	2916	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	0	0	0	0	multi-exon	TRUE	canonical	3	239	junction_9	14.7126551724093	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951776	105979685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ENSMUST00000034370.17	chr8	-	3811	24	FSM	ENSMUSG00000017765.18	ENSMUST00000034370.17	3811	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_23	38.1304595706627	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	False	NA	-4	True	AATAAA	-18	NA	106692729	106670224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692550
ENSMUST00000034371.9	chr8	-	1698	10	FSM	ENSMUSG00000031898.10	ENSMUST00000034371.9	1698	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	8.79955105476592	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGAGCCCTCGTCCTC	NA	False	NA	1	True	AATAAA	-21	NA	106706061	106700144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106700484_106701326_106701463_106701813_106701890_106702751_106702837_106703892_106704070_106704191_106704262_106704531_106704674_106704773_106704904_106705343_106705471_106705645
ENSMUST00000034375.11	chr8	+	1860	16	FSM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	22.4047613987146	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACCTGCTTCAACCT	NA	False	NA	12	True	AATAAA	-12	NA	106738138	106780451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ENSMUST00000034377.8	chr8	+	2706	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	8.49941174435031	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTTGTCCTGCTCTGA	6197	False	NA	14	True	AATAAA	-20	NA	106877030	106891347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
ENSMUST00000034378.5	chr8	+	3750	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	138.200159010825	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTTGCCATTGGTTCT	1832	False	NA	4	True	AATAAA	-18	NA	106895488	106925338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ENSMUST00000034382.8	chr8	+	2632	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	5.09901951359278	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATGGCCAAGGCTCAT	NA	False	NA	NA	False	AAGAAA	-13	NA	107141970	107152521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
ENSMUST00000034388.10	chr8	+	2178	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_10	19.6532440070335	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTGGAGTCGTCTCAT	NA	False	NA	17	True	AATAAA	-17	NA	107757853	107772387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUST00000034391.4	chr8	-	2954	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	47.5116827738189	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCTTCTACTGGTAG	NA	False	NA	NA	False	NA	NA	NA	107783316	107772926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ENSMUST00000034392.13	chr8	+	3036	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCCGTATCAACTCT	NA	False	NA	19	True	ATTAAA	-20	NA	107783508	107787563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ENSMUST00000034392.13-0	chr8	+	1118	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	24	1894	0	371	multi-exon	FALSE	canonical	3	714	junction_4	51.2688989544344	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATATGTGTGAGTGT	NA	False	NA	28	True	AATAAA	-22	NA	107783532	107785669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ENSMUST00000034396.14	chr9	+	3788	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	44.4939803312121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13659705	13717777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUST00000034398.12	chr9	-	2523	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCTAACAAAGGCTTTAT	NA	False	NA	NA	False	AATAAA	-26	NA	13738403	13719089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUST00000034398.12-0	chr9	-	2079	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	54	390	0	0	multi-exon	FALSE	canonical	3	149	junction_4	39.1587793476763	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTTTTGCTTTGGTA	NA	False	NA	-1	True	ATTAAA	-18	NA	13738349	13719479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUST00000034400.5	chr8	+	4316	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	0	0	0	0	multi-exon	FALSE	canonical	3	1441	junction_2	30.906107810593	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGGTTGCTTTTTTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	107877271	107914103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ENSMUST00000034405.11	chr9	+	3286	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_1	46.9081733954962	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAATAATCTCATTCCCT	NA	False	NA	9	True	AATAAA	-27	NA	14695949	14745942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUST00000034405.11-0	chr9	+	2556	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	48	682	0	-682	multi-exon	FALSE	canonical	3	154	junction_1	46.9081733954962	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695997	14745260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUST00000034406.4	chr9	-	1753	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAATCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	14694260	14691504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_14692908_14693910
ENSMUST00000034408.12	chr9	+	2271	4	FSM	ENSMUSG00000031932.15	ENSMUST00000034408.12	3586	4	-129	1444	-129	-965	multi-exon	FALSE	canonical	2	2	junction_2	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAGCCTGTTAA	NA	False	NA	NA	False	NA	NA	NA	14771376	14780641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_14772217_14776067_14776194_14778144_14778279_14779470
ENSMUST00000034411.10	chr9	-	2446	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	0	1518	0	138	multi-exon	TRUE	canonical	3	139	junction_7	15.3563726777577	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCAAGTATTTTGTGA	NA	False	NA	-4	True	CATAAA	-18	NA	15191227	15173164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ENSMUST00000034413.8	chr9	+	1991	4	FSM	ENSMUSG00000031937.8	ENSMUST00000034413.8	1991	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	3.68178700572909	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGCAAGTTTGTTTTTC	NA	False	NA	NA	False	ATTAAA	-1	NA	15150340	15170712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_15150655_15168525_15168853_15168946_15169088_15169503
ENSMUST00000034414.10	chr9	-	2562	8	FSM	ENSMUSG00000031938.16	ENSMUST00000034414.10	2562	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.8703477668983	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTTTTCTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	15212852	15194634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662
ENSMUST00000034426.14	chr8	-	2008	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	0	0	0	0	multi-exon	FALSE	canonical	3	1149	junction_10	189.523538373557	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737955	112720074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ENSMUST00000034427.12	chr8	-	3159	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	12.5521135891752	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGTAACATTTTTTAAT	NA	False	NA	-10	True	ATTAAA	-5	NA	112718934	112693539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ENSMUST00000034428.8	chr8	+	1677	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACATGTACT	NA	False	NA	NA	False	NA	NA	NA	112667334	112680244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ENSMUST00000034428.8-0	chr8	+	980	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	0	697	0	173	multi-exon	FALSE	canonical	3	2738	junction_1	80.3838015744189	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGTGACCATGTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	112667334	112679547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ENSMUST00000034429.9	chr8	-	2984	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	6.79256129077161	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCCTTGGCTTCTGAA	NA	False	NA	-4	True	ATTAAA	-15	NA	112660513	112638642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ENSMUST00000034431.3	chr8	-	3878	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	7	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCGTTGGGAACCTT	NA	False	NA	-5	True	AATAAA	-14	NA	112603382	112589669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112593129_112596219_112596391_112603134
ENSMUST00000034432.7	chr8	-	1178	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_5	79.8013157786261	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580923	112495122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUST00000034437.8	chr8	-	3729	27	FSM	ENSMUSG00000031959.16	ENSMUST00000034437.8	4896	27	-22	1189	0	0	multi-exon	FALSE	canonical	2	3	junction_9	16.2917647181985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGTTTTCTGTTTCTCT	NA	False	NA	NA	False	AAGAAA	-10	NA	112248724	112176839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112199261_112199319_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ENSMUST00000034441.8	chr8	+	5750	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	0	0	0	0	multi-exon	FALSE	canonical	2	1913	junction_1	386.82599124154	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGAGTCTGTGTTT	NA	False	NA	70	True	NA	NA	NA	111760533	111784296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUST00000034452.12	chr8	-	2390	3	FSM	ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	2	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCTTGCTAGTGATAA	NA	False	NA	NA	False	ATTAAA	-26	NA	124586269	124567569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_124569258_124571918_124572185_124585833
ENSMUST00000034457.9	chr8	+	5853	9	FSM	ENSMUSG00000031976.15	ENSMUST00000034457.9	5853	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	25.7533371623951	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTATTCTGCTGGGTAG	NA	False	NA	21	True	AATAAA	-25	NA	124750132	124775244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ENSMUST00000034458.9	chr8	+	4113	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	15.1299555701778	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCCGCTGTCAGTCT	8565	False	NA	32	True	AATAAA	-22	NA	124958129	125072461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ENSMUST00000034460.11	chr8	+	2825	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_7	26.4246660485719	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247505	125278747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUST00000034463.4	chr8	+	1165	6	FSM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	35.5111250173801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGGTTGTCTTTTGAA	NA	False	NA	21	True	AATAAA	-30	NA	125448877	125460862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460545
ENSMUST00000034464.8	chr8	-	3307	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	4.10960933531265	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGATCTGTTTCATTTTC	NA	False	NA	-3	True	AATAAA	-19	NA	125390108	125362494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
ENSMUST00000034465.9	chr8	-	2340	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCTGATGAGGCCTCC	NA	False	NA	NA	False	NA	NA	NA	125589859	125565226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUST00000034465.9-0	chr8	-	1365	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	106	869	0	-869	multi-exon	FALSE	canonical	3	1367	junction_2	144.59416385948	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTGACTGTTAAGTAG	NA	False	NA	-10	True	AATACA	-14	NA	125589753	125566095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUST00000034466.10	chr8	+	2984	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_6	36.0101220337961	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	5120	False	NA	34	True	AATAAA	-25	NA	125589771	125616796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUST00000034467.7	chr8	+	4464	5	FSM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	8.10478253872366	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGATGTGTCTTTCCG	NA	False	NA	9	True	AATAAA	-18	NA	125624624	125632900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429
ENSMUST00000034469.7	chr8	-	3594	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTTGTCACCTCCAG	NA	False	NA	-17	True	ATTAAA	-30	NA	125676063	125635325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
ENSMUST00000034469.7-0	chr8	-	1970	5	FSM	ENSMUSG00000031987.7	ENSMUST00000034469.7	3594	5	0	1624	0	-1624	multi-exon	FALSE	canonical	3	265	junction_4	22.6605383872493	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTTGCCAGTGAGT	NA	False	NA	-10	True	ATTAAA	-23	NA	125676063	125636949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
ENSMUST00000034470.11	chr9	-	3575	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	12.273548794053	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTCTGTGGTCTTTCCT	NA	False	NA	-3	True	ATTAAA	-42	NA	26941361	26919066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ENSMUST00000034472.16	chr9	-	1942	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	42.8396355610082	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27066689	27008679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ENSMUST00000034478.3	chr9	-	3259	19	FSM	ENSMUSG00000031995.10	ENSMUST00000034478.3	3259	19	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_11	45.3756610671839	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043149	31000697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
ENSMUST00000034499.10	chr9	+	1122	7	FSM	ENSMUSG00000032002.11	ENSMUST00000034499.10	1122	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	367.438165621857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	10	True	NA	24	True	AATAAA	-32	NA	7184550	7207040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7206719
ENSMUST00000034508.14	chr9	+	3867	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	11.1654228162962	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	43978317	44006924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ENSMUST00000034512.7	chr9	-	1857	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	0	669	0	563	multi-exon	FALSE	canonical	3	37	junction_2	2.62466929133727	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTATGGCGCCAGCTTAG	NA	False	NA	-4	True	AATAAA	-21	NA	43151208	43133200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
ENSMUST00000034513.13	chr9	-	2610	13	FSM	ENSMUSG00000032015.17	ENSMUST00000034513.13	2610	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	24.8791523614094	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGTTCAGAGGAGTG	NA	False	NA	NA	False	CATAAA	-17	NA	43121666	43035233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43121476
ENSMUST00000034515.7	chr9	-	3413	19	FSM	ENSMUSG00000032017.15	ENSMUST00000034515.7	3413	19	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_7	3.01488078915892	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTTGTTGATGTCCTT	NA	False	NA	NA	False	ATTAAA	-33	NA	42719995	42431707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_42432482_42435775_42435895_42448609_42448739_42453117_42453344_42455053_42455220_42458862_42459037_42461702_42461813_42477594_42477709_42502645_42502850_42509149_42509258_42533354_42533460_42534221_42534375_42540272_42540435_42566782_42566837_42571013_42571193_42582433_42582600_42586508_42586607_42599228_42599394_42719788
ENSMUST00000034524.5	chr9	-	1077	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_4	53.1959167188193	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	-1	True	AATAAA	-26	NA	48391911	48379811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
ENSMUST00000034529.14	chr9	-	3585	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_17	44.7831882587348	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGTGGGTATACG	NA	False	NA	57	True	AATGAA	-14	NA	53578811	53528323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ENSMUST00000034537.8	chr9	-	2095	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	8.15107354892593	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTGGGGCTCTGTGT	NA	False	NA	-2	True	ATTAAA	-24	NA	35028169	34957871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUST00000034539.12	chr9	-	1274	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	33.1083071146804	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGTAGCCCAGTAG	NA	False	NA	-3	True	AATAAA	-22	NA	35087357	35035703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ENSMUST00000034541.12	chr9	+	2993	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	0	0	0	0	multi-exon	TRUE	canonical	3	518	junction_4	138.528744373691	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	5512	False	NA	3	True	AATAAA	-18	NA	35122450	35128310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUST00000034543.5	chr9	+	1821	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	10.6052921799554	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAATTTTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	35179160	35187261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUST00000034547.6	chr9	-	1500	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	52	1853	0	112	multi-exon	FALSE	canonical	3	149	junction_5	11.4912830779187	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTTTATTTTTTTGT	NA	False	NA	-26	True	AATAAA	-13	NA	53521630	53493674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
ENSMUST00000034552.8	chr9	-	875	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTGTGTTTGGTGAT	1037	False	NA	-5	True	AATAAA	-17	NA	51874846	51854605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
ENSMUST00000034552.8-0	chr9	-	686	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	-10	199	0	-137	multi-exon	FALSE	canonical	3	440	junction_2	28.5929284186765	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACCTATTTTTATAAT	1027	False	NA	NA	False	AATAAA	-20	NA	51874856	51854804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
ENSMUST00000034561.11	chr9	+	2873	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	29.092042533578	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTAAGATTTTTTTAA	NA	False	NA	24	True	TTTAAA	-31	NA	50686318	50754828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ENSMUST00000034564.4	chr9	-	1257	4	FSM	ENSMUSG00000032062.4	ENSMUST00000034564.4	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGATTGATTGTTCCTG	2116	False	NA	NA	False	AATAAA	-17	NA	50657836	50650990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
ENSMUST00000034567.4	chr9	-	4035	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATCTGTTGGTAGTT	NA	False	NA	-1	True	ATTAAA	-26	NA	50571080	50545932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUST00000034567.4-0	chr9	-	2631	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	253	1151	253	744	multi-exon	FALSE	canonical	3	1156	junction_6	75.3673449604703	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACACGTTGTAGAAGTGG	NA	False	NA	-4	True	AATAAA	-19	NA	50570827	50547083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUST00000034568.7	chr9	-	895	5	FSM	ENSMUSG00000032065.7	ENSMUST00000034568.7	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	2.27760839478607	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATATTTCCATTTGATT	6977	False	NA	NA	False	AATAAA	-21	NA	50472610	50468224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50468792_50469548_50469601_50469686_50469799_50470519_50470599_50472525
ENSMUST00000034570.7	chr9	-	1046	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	16.1294761229248	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7959	False	NA	NA	False	AATAAA	-18	NA	50439951	50432916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
ENSMUST00000034591.11	chr9	+	3878	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	0	2180	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.43139024560011	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	7298	False	NA	NA	False	NA	NA	NA	45749877	45773517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUST00000034600.5	chr9	+	3107	6	FSM	ENSMUSG00000032092.6	ENSMUST00000034600.5	3107	6	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_5	54.042205728486	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	15	True	AATAAA	-18	NA	44953722	44965313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963175
ENSMUST00000034607.10	chr9	-	4072	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	0	0	0	0	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTATCCCTCAAACGG	NA	False	NA	NA	False	NA	NA	NA	44679142	44652860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUST00000034607.10-0	chr9	-	3489	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	0	583	0	-583	multi-exon	FALSE	canonical	3	910	junction_6	81.8426674920987	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGATGTTTACTGGA	NA	False	NA	-24	True	AATAAA	-11	NA	44679142	44653443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUST00000034612.7	chr9	-	1644	12	FSM	ENSMUSG00000032101.7	ENSMUST00000034612.7	6934	12	85	5205	85	-5205	multi-exon	FALSE	canonical	3	22	junction_11	3.32533475603125	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGACCTGAGGGCTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	35469739	35453147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35453356_35454893_35455083_35457109_35457273_35458076_35458315_35462580_35462759_35464132_35464248_35465602_35465706_35465812_35465906_35468061_35468198_35468677_35468726_35468980_35469048_35469633
ENSMUST00000034615.10	chr9	+	2019	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	6.68331255192114	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGACCCTTTAGAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	35470755	35478697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ENSMUST00000034623.8	chr9	-	1220	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTCTCCTAACTGAT	1473	False	NA	-8	True	AATAAA	-17	NA	44318897	44315055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
ENSMUST00000034623.8-0	chr9	-	969	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	249	2	0	0	multi-exon	FALSE	canonical	3	556	junction_4	135.857462069626	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTCTCTCCTAACTG	1722	False	NA	-10	True	AATAAA	-15	NA	44318648	44315057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
ENSMUST00000034625.12-1	chr9	-	2366	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	73	958	0	0	multi-exon	FALSE	canonical	3	297	junction_12	54.0685650098301	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGGGTCCTGTATTCC	721	False	NA	NA	False	ATTAAA	-12	NA	36637881	36620735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ENSMUST00000034630.15	chr9	+	1794	10	FSM	ENSMUSG00000032118.17	ENSMUST00000034630.15	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	5.61743318211757	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCATGGTTTTTGGAGA	NA	False	NA	18	True	AATAAA	-18	NA	36743979	36790220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_36744208_36754957_36755314_36761642_36761743_36772107_36772195_36774792_36774962_36778991_36779264_36780143_36780225_36781776_36781853_36787592_36787659_36789861
ENSMUST00000034632.10	chr9	+	1011	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	104	1504	104	-1504	multi-exon	FALSE	canonical	3	46	junction_1	7.40870359029762	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTGGCTGCAGCTTT	NA	False	NA	27	True	AATAAA	-33	NA	37119622	37134492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
ENSMUST00000034644.10	chr9	-	3536	16	FSM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	77.9168787875901	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTTCTGGATAGCCTC	6378	False	NA	NA	False	AATATA	-16	NA	44272967	44259045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
ENSMUST00000034644.10-0	chr9	-	3191	16	FSM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	0	345	0	-166	multi-exon	FALSE	canonical	0	0	junction_10	77.9168787875901	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6378	False	NA	-27	True	AATAAA	-27	NA	44272967	44259390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
ENSMUST00000034648.16	chr9	-	3476	14	FSM	ENSMUSG00000032131.17	ENSMUST00000034648.16	3476	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.38888231425137	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGGTGTGAATGTCGAT	NA	False	NA	NA	False	AATAAA	-19	NA	44198841	44184484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512
ENSMUST00000034650.15	chr9	+	2989	16	FSM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	5.20085463062456	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGTTCCATTCAT	78	False	NA	19	True	AATAAA	-21	NA	44045858	44054024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
ENSMUST00000034689.8	chr9	+	3843	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	0	0	0	0	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTTTGTCAGAGGGATC	NA	False	NA	NA	False	NA	NA	NA	20563390	20577880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ENSMUST00000034689.8-0	chr9	+	971	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	0	2872	0	-2872	multi-exon	FALSE	canonical	3	2626	junction_2	73.4892282356174	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCTGGTGAGGTGTGGG	NA	False	NA	45	True	ATTAAA	-35	NA	20563390	20575008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ENSMUST00000034697.8	chr9	+	3456	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_21	32.3776608971381	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACCTGGTATGCTTA	5736	False	NA	16	True	AATAAA	-16	NA	21249123	21266321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUST00000034698.9	chr9	-	1378	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	14.8548533034381	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421548	21418850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
ENSMUST00000034702.6	chr9	+	1189	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	3	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTTCATTTCTCTTATT	NA	False	NA	7	True	AATAAA	-17	NA	75533022	75545053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_75533320_75542667_75543000_75544493
ENSMUST00000034703.15	chr9	+	3220	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_5	67.5234938537856	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458189	21500763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ENSMUST00000034713.9	chr9	+	4627	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	34.4140270749526	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1773	False	NA	16	True	ATTAAA	-15	NA	21634778	21661215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUST00000034717.7	chr9	-	5040	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	126.069113932015	921	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTCGTGTCTGTTTG	NA	False	NA	-12	True	AATAAA	-15	NA	21710040	21678079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ENSMUST00000034720.12	chr9	-	2200	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	0	0	0	0	multi-exon	FALSE	canonical	3	2231	junction_1	103.721850264167	3570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGAGTTTCCGTTCT	2470	False	NA	1	True	NA	NA	NA	71393217	71385718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ENSMUST00000034722.5	chr9	+	2979	6	FSM	ENSMUSG00000032202.12	ENSMUST00000034722.5	2979	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.86781592116274	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAATAATAAAA	NA	False	NA	NA	False	ATTAAA	-11	NA	72952138	73004874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72952294_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
ENSMUST00000034723.6	chr9	+	2264	14	FSM	ENSMUSG00000013584.6	ENSMUST00000034723.6	2264	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.4973358585766	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGTTTGTGTTTGTGAG	NA	False	NA	NA	False	AATAAA	-24	NA	71123070	71203525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_71123246_71159879_71159985_71160197_71160339_71162315_71162446_71169012_71169075_71171068_71171198_71171314_71171429_71188885_71188989_71190659_71190845_71192135_71192301_71192397_71192556_71193201_71193277_71200887_71200977_71202892
ENSMUST00000034728.9	chr9	-	6467	49	FSM	ENSMUSG00000032198.10	ENSMUST00000034728.9	6467	49	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_31	48.2352452972812	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6256	False	NA	NA	False	TTTAAA	-18	NA	21763931	21711475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743237_21744139_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ENSMUST00000034734.9	chr9	+	1975	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.44233891097922	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTCTGAAAACCTTATT	9178	False	NA	NA	False	AATAAA	-15	NA	72866066	72880346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
ENSMUST00000034737.13	chr9	+	1681	3	FSM	ENSMUSG00000092622.9	ENSMUST00000034737.13	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	18.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGGTGTGTATTTGA	NA	False	NA	26	True	AATAAA	-13	NA	73009679	73011720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_73009958_73010111_73010292_73010497
ENSMUST00000034738.14	chr9	+	1543	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_5	127.855230632149	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACATATCTCTTATTT	8580	False	NA	13	True	AATAAA	-18	NA	73020729	73030615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ENSMUST00000034739.12	chr9	-	4880	15	FSM	ENSMUSG00000032217.14	ENSMUST00000034739.12	4880	15	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_2	86.8932021013645	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2246	False	NA	-18	True	AATAAA	-16	NA	70411007	70332710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ENSMUST00000034740.15	chr9	+	5499	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	553.560943449088	5139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569627	72657134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUST00000034742.8	chr9	-	1531	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	0	0	0	0	multi-exon	FALSE	canonical	3	1324	junction_2	68.4557338723353	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328829	70314973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUST00000034745.9	chr9	+	4625	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_9	20.3906969292862	568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGTTTCTTCATGACA	NA	False	NA	20	True	AATAAA	-20	NA	70114649	70307048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ENSMUST00000034746.10	chr9	+	5250	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	21.6834692682276	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACATTGTTCTTTATATT	NA	False	NA	NA	False	AATAAA	-19	NA	72345816	72369307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ENSMUST00000034749.16	chr9	-	3703	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGGCATGGGACTTT	NA	False	NA	-20	True	AATAAA	-19	NA	70048860	69995792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ENSMUST00000034749.16-0	chr9	-	2257	9	FSM	ENSMUSG00000032224.16	ENSMUST00000034749.16	3703	9	108	1338	108	-1338	multi-exon	FALSE	canonical	3	198	junction_1	14.7118149798045	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTGCCTTGGTTTTT	NA	False	NA	-34	True	NA	NA	NA	70048752	69997130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_69998174_70000772_70000966_70003332_70003469_70006369_70006477_70010101_70010232_70017539_70017659_70032205_70032480_70033468_70033566_70048594
ENSMUST00000034754.12	chr9	+	2464	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	104.017354321286	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTTCTCTGGTGTATA	NA	False	NA	79	True	AATGAA	-19	NA	69896747	69915599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUST00000034755.13	chr9	-	4621	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTGAGTTTTTTACACTC	9404	False	NA	-27	True	AATAAA	-30	NA	72019103	71751549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ENSMUST00000034755.13-0	chr9	-	3213	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	-50	1458	0	-214	multi-exon	FALSE	canonical	3	33	junction_6	15.470103416687	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGACTTTTCAGGCT	9354	False	NA	NA	False	AATAAA	-21	NA	72019153	71753007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ENSMUST00000034756.15	chr9	+	1447	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	12.0908022893437	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTTGCCTTTGCTTTCA	NA	False	NA	NA	False	AATAAA	-25	NA	69360901	69399077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
ENSMUST00000034761.15	chr9	+	4169	16	FSM	ENSMUSG00000032235.16	ENSMUST00000034761.15	4169	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	13.7737270030865	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	4652	False	NA	69	True	AATACA	-21	NA	69305187	69340404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ENSMUST00000034763.10	chr9	-	1134	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_2	10.1311401135312	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTCATTATTAATACAG	9510	False	NA	-1	True	AATAAA	-23	NA	22379644	22359606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
ENSMUST00000034775.10	chr9	-	6785	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	0	433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGAAGTTTGTGTCTTTA	NA	False	NA	-5	True	AGTAAA	-18	NA	62719216	62699102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_62705011_62718339
ENSMUST00000034776.13	chr9	+	2142	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	5.87130498460285	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCGTGGCTGTTTCTAG	NA	False	NA	13	True	AATAAA	-21	NA	62746066	62759288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
ENSMUST00000034785.8	chr9	-	4626	3	FSM	ENSMUSG00000032252.15	ENSMUST00000034785.8	4626	3	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	12.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	61977888	61964529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_61968318_61975666_61975913_61977296
ENSMUST00000034787.12	chr9	-	10756	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_28	10.5485322148115	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTACTTAGAACAG	NA	False	NA	NA	False	AATAAA	-17	NA	82857569	82748211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ENSMUST00000034787.12-0	chr9	-	10494	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	0	262	0	-262	multi-exon	FALSE	canonical	3	34	junction_28	10.5485322148115	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTGTAGAGCCTCAT	NA	False	NA	-4	True	AATAAA	-21	NA	82857569	82748473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ENSMUST00000034791.15	chr9	-	4160	8	FSM	ENSMUSG00000032258.16	ENSMUST00000034791.15	4160	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	8.75051018920774	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATCCTTTATTTGAAT	NA	False	NA	-5	True	AATAAA	-14	NA	83323080	83275471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83322961
ENSMUST00000034796.14	chr9	-	3001	6	FSM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	3.49857113690718	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCCGTCGTTGATTTG	NA	False	NA	1	True	AATAAA	-26	NA	83688305	83660744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_83662863_83665188_83665317_83667087_83667260_83670321_83670403_83672029_83672218_83687991
ENSMUST00000034801.11	chr9	+	1472	11	FSM	ENSMUSG00000032263.15	ENSMUST00000034801.11	1472	11	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83807202	84006292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ENSMUST00000034803.10	chr9	+	2863	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_12	29.9965923990635	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGTGTCTTTAATAA	NA	False	NA	20	True	AGTAAA	-16	NA	48966912	48990072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ENSMUST00000034808.12	chr9	-	1043	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGCTCACTGTATG	NA	False	NA	10	True	ATTAAA	-33	NA	48516453	48503176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_48503663_48514653_48514862_48516104
ENSMUST00000034815.9	chr9	-	3398	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	42.1913194628531	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ENSMUST00000034820.16	chr9	+	4646	20	FSM	ENSMUSG00000032280.17	ENSMUST00000034820.16	4646	20	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_13	43.258483548224	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGATTGTTGTGTT	NA	False	NA	36	True	AAAAAG	-1	NA	61280139	61325769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUST00000034827.10	chr9	+	924	1	FSM	ENSMUSG00000032288.10	ENSMUST00000034827.10	924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTGTCTGGTCGTTCT	NA	False	NA	18	True	AATAAA	-27	NA	56844758	56845682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56844800_56845700
ENSMUST00000034830.9	chr9	+	802	4	FSM	ENSMUSG00000032291.9	ENSMUST00000034830.9	802	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	35.3679076125361	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGGGCTCTTTCTTTGA	NA	False	NA	18	True	ATTAAA	-14	NA	54672031	54680394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54672256_54672766_54672946_54675667_54675782_54680109
ENSMUST00000034831.3	chr9	-	2037	8	FSM	ENSMUSG00000032292.9	ENSMUST00000034831.3	2037	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	3.8438925848782	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGCTCTCTGTTGAGA	NA	False	NA	55	True	NA	NA	NA	59857400	59850053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_59850803_59854244_59854351_59854595_59854837_59855645_59855804_59855885_59856108_59856207_59856312_59856464_59856592_59857070
ENSMUST00000034832.8	chr9	+	4101	13	FSM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	5.9207732227772	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTTTAGTTTCATCAAT	NA	False	NA	NA	False	TATAAA	-18	NA	56902206	56970091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ENSMUST00000034834.16	chr9	+	2432	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	0	0	0	0	multi-exon	FALSE	canonical	3	15664	junction_5	1339.70741581884	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1664	False	NA	20	True	AATAAA	-20	NA	59563650	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUST00000034836.16	chr9	+	3215	26	FSM	ENSMUSG00000032295.16	ENSMUST00000034836.16	3215	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	55.7568148301174	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTATAATGGTGCCTTG	NA	False	NA	13	True	AATAAA	-14	NA	57038053	57049487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046137_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ENSMUST00000034843.9	chr9	+	5770	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	0	0	0	0	multi-exon	TRUE	canonical	3	193	junction_6	38.4690587449917	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTCGTTGTGTTTTAT	2626	False	NA	14	True	AATAAA	-19	NA	54771072	54819814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ENSMUST00000034846.7	chr9	-	4152	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	39.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGATCTAGCTTTGTAC	NA	False	NA	-7	True	ATTAAA	-21	NA	57169895	57160399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57161613_57163668_57166424_57169711
ENSMUST00000034848.14	chr9	+	1165	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	0	0	0	0	multi-exon	FALSE	canonical	3	1650	junction_8	116.746252616519	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGTGAAAGGATACTT	NA	False	NA	2	True	AATAAA	-15	NA	54858073	54865314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUST00000034856.15	chr9	-	1780	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	33.2393914333151	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCAGCCTTTGGTAT	8951	False	NA	-8	True	ATTAAA	-30	NA	57460046	57451538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ENSMUST00000034859.15	chr9	+	2112	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	369.828526331987	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTGTAATTATTGCT	NA	False	NA	11	True	AATAAA	-18	NA	55116208	55131717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUST00000034863.8	chr9	-	2749	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_12	11.433381924095	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTCGGCGCTTCCTC	NA	False	NA	-25	True	AATAAA	-23	NA	57552936	57533928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
ENSMUST00000034866.9	chr9	-	1392	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_8	89.5680174619608	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACTATCAGAAACATGC	NA	False	NA	-13	True	AATAAA	-30	NA	55419527	55361791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUST00000034868.14	chr1	-	1796	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	59.1577458063514	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463225	58451158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
ENSMUST00000034876.10	chr9	-	1716	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_1	24.1522945769824	749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGTACATTTTAATTATT	NA	False	NA	-3	True	AATAAA	-17	NA	56068341	56043167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ENSMUST00000034878.12	chr9	-	3658	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_2	27.5282682992511	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	False	NA	-9	True	AATAAA	-14	NA	79700712	79676224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ENSMUST00000034879.5	chr9	+	3778	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	43.8482230730809	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGACCAGTTTTGCT	NA	False	NA	11	True	ATTAAA	-17	NA	56325892	56404220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ENSMUST00000034881.8	chr9	-	659	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTCAGCAGTTGGCA	NA	False	NA	0	True	AATAAA	-16	NA	79667160	79662642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
ENSMUST00000034881.8-0	chr9	-	446	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	168	45	0	0	multi-exon	FALSE	canonical	3	5621	junction_3	439.918426781855	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79666992	79662687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
ENSMUST00000034883.7	chr9	+	1984	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	85.7729561108861	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160446	58169803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUST00000034896.13	chr9	+	2366	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	10.2457409010559	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	False	NA	19	True	AATAAA	-18	NA	78355489	78381434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUST00000034900.8	chr9	-	2138	3	FSM	ENSMUSG00000032346.8	ENSMUST00000034900.8	2138	3	0	0	0	0	multi-exon	FALSE	canonical	3	1945	junction_2	79.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGATAAAGCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	78286007	78283390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_78284974_78285256_78285440_78285635
ENSMUST00000034902.12	chr9	-	870	7	FSM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	11.4260910006684	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTCATAAGTTCTA	NA	False	NA	1	True	AATAAA	-17	NA	78254440	78238299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78254370
ENSMUST00000034903.7	chr9	+	977	7	FSM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	0	0	0	0	multi-exon	FALSE	canonical	3	2717	junction_1	326.320735201155	959	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGTTGGAGAGGTGTTT	NA	False	NA	17	True	ATTAAA	-16	NA	78099228	78116631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUST00000034904.14	chr9	+	2782	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_6	44.3764048354804	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTCTGTTGTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	77824645	77891801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ENSMUST00000034905.9	chr9	+	3423	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	20.3437131976114	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4420	False	NA	18	True	AATAAA	-45	NA	77661816	77701767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ENSMUST00000034913.5	chr11	-	1205	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_4	30.2861354418156	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGGCAGTCTGT	NA	False	NA	-24	True	AATAAA	-17	NA	120440553	120433713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
ENSMUST00000034916.10	chr5	+	967	1	FSM	ENSMUSG00000046440.10	ENSMUST00000034916.10	967	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGGGTGTGCTCGCCCT	NA	False	NA	NA	False	NA	NA	NA	138503074	138504041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138503100_138504000
ENSMUST00000034920.11	chr9	-	2310	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_19	9.60607328677695	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63285184	63071049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ENSMUST00000034929.7	chr9	-	2031	6	FSM	ENSMUSG00000032370.9	ENSMUST00000034929.7	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	9.68710483064987	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGGCACTTTTCAGT	NA	False	NA	NA	False	AATAAA	-11	NA	66882766	66862674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66863483_66874960_66875127_66877863_66878219_66878457_66878649_66881999_66882067_66882322
ENSMUST00000034944.9	chr9	+	1772	12	FSM	ENSMUSG00000032380.10	ENSMUST00000034944.9	1772	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	2.90340353139478	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGGTGTTTTAGAGCT	4134	False	NA	NA	False	ATTAAA	-17	NA	66065504	66179524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_66065623_66072619_66072718_66127815_66128038_66138994_66139134_66153698_66153829_66157618_66157668_66158356_66158384_66161752_66161906_66162612_66162659_66175960_66176051_66176148_66176233_66178908
ENSMUST00000034945.6	chr9	+	1240	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_3	21.6376408140999	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTCACCTTAGGTTTT	1383	False	NA	17	True	AATAAA	-18	NA	66033892	66046237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ENSMUST00000034946.15	chr9	-	2073	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	0	0	0	0	multi-exon	FALSE	canonical	2	266	junction_13	37.3054135153468	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACTGGGCATGGTAGCA	NA	False	NA	-4	True	AATAAA	-20	NA	66032168	65995414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ENSMUST00000034947.7	chr9	+	892	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	0	0	0	0	multi-exon	FALSE	canonical	3	2090	junction_4	160.535626886994	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	1574	False	NA	16	True	AATAAA	-16	NA	65967512	65973905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
ENSMUST00000034949.10	chr9	+	7208	14	FSM	ENSMUSG00000032384.17	ENSMUST00000034949.10	7208	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	6.58040843321514	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGTTTCATTAGCTG	NA	False	NA	27	True	AATAAA	-28	NA	65816267	65952297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65816451_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ENSMUST00000034953.14	chr5	-	764	4	FSM	ENSMUSG00000059518.15	ENSMUST00000034953.14	764	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	111.749720357592	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137015683	137011047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137011542_137011721_137011802_137013732_137013904_137015664
ENSMUST00000034955.8	chr9	+	1664	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	6	1010	0	-1010	multi-exon	FALSE	canonical	3	680	junction_7	65.1440711039769	585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTCTGTGATGAGTGA	7182	False	NA	15	True	AATAAA	-17	NA	65368234	65394742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUST00000034960.14	chr9	+	4808	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_17	12.9379287368574	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTTCCCCCATGAC	NA	False	NA	31	True	ATTAAA	-28	NA	64939695	64989933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ENSMUST00000034961.6	chr9	+	3146	14	FSM	ENSMUSG00000032394.7	ENSMUST00000034961.6	3146	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	21.5941587543412	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65048470	65093154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091114_65091194_65091314_65091523_65092415
ENSMUST00000034964.7	chr9	+	1211	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_1	675.401679425976	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUST00000034966.9	chr9	+	1538	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	0	0	0	0	multi-exon	FALSE	canonical	3	16882	junction_3	1427.06559842995	11417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCTTTGTTCCACATG	NA	False	NA	16	True	AATAAA	-13	NA	64080656	64085948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUST00000034973.10	chr9	-	5090	9	FSM	ENSMUSG00000032402.13	ENSMUST00000034973.10	5090	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.14174095030078	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTGCTGCTGTCTCTG	2283	False	NA	-2	True	AATAAA	-40	NA	63665276	63554048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63664753
ENSMUST00000034980.9	chr9	+	8056	47	FSM	ENSMUSG00000032409.16	ENSMUST00000034980.9	8056	47	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_14	23.1390654868948	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAGTAATCTGAAATC	NA	False	NA	9	True	AATAAA	-15	NA	95739649	95833697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790496_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ENSMUST00000034982.16	chr9	+	7354	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	115.436009209528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTCATAATTGGTG	NA	False	NA	NA	False	AATAAA	-14	NA	96078356	96205699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUST00000034982.16-0	chr9	+	1679	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	0	5675	0	0	multi-exon	FALSE	canonical	3	58	junction_3	115.436009209528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGAGAGAACTCATGT	NA	False	NA	-6	True	NA	NA	NA	96078356	96200024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUST00000034983.7	chr9	-	1994	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_2	81.5754592727222	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAACACATGATGGAGT	NA	False	NA	-10	True	AATAAA	-41	NA	96246495	96214707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ENSMUST00000034984.8	chr9	-	5813	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	16.7988207345585	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTTGTGAGACCTT	NA	False	NA	NA	False	AATAAA	-15	NA	96513670	96421352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ENSMUST00000034986.14	chr9	-	1790	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_5	4.12160822022031	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTTTTGTTCTTTAT	NA	False	NA	0	True	ATTAAA	-26	NA	86347003	86189358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
ENSMUST00000034988.10	chr9	+	1355	3	FSM	ENSMUSG00000032417.11	ENSMUST00000034988.10	1355	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTGTCTCAAGTCCAA	NA	False	NA	6	True	AATAAA	-19	NA	86454068	86456952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_86454271_86454889_86455117_86456026
ENSMUST00000034989.15	chr9	-	3288	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	0	0	0	0	multi-exon	TRUE	canonical	3	250	junction_5	30.9913139195733	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTAAATGTCATTTTTT	9610	False	NA	NA	False	ATTAAA	-20	NA	86578006	86463423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUST00000035007.10	chr9	+	3383	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	12.8322510366134	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560240	114578412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
ENSMUST00000035009.16	chr9	-	993	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_1	123.353911571543	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCCTTATTGCATGAGA	NA	False	NA	-14	True	AATAAA	-16	NA	114610917	114585903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ENSMUST00000035010.10	chr9	-	4221	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_10	54.7444974403821	1187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGATTTCTGATACCTTG	NA	False	NA	-34	True	AATAAA	-21	NA	115139489	115071648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ENSMUST00000035014.8	chr9	-	4611	7	FSM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	95	-1230	0	1230	multi-exon	FALSE	canonical	1	1	junction_6	1.95078331845327	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCACCTTGCCTCTTGT	NA	False	NA	NA	False	AATAAA	-34	NA	116004333	115916766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_116004011
ENSMUST00000035020.15	chr9	+	3560	6	FSM	ENSMUSG00000032446.15	ENSMUST00000035020.15	3560	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	4.35430821141545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATTTTATTTATTTA	NA	False	NA	NA	False	AATAAA	-42	NA	118307411	118315200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313341
ENSMUST00000035024.8	chr9	-	4043	3	FSM	ENSMUSG00000032449.14	ENSMUST00000035024.8	4043	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	641	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGATTTTATAATGGT	77	False	NA	-4	True	ATTAAA	-37	NA	96966523	96957617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96961293_96962245_96962536_96966445
ENSMUST00000035033.7	chr9	+	3050	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	0	0	0	0	multi-exon	TRUE	canonical	3	669	junction_10	53.4673910412871	1258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTTGAGTTTCCTTCCT	NA	False	NA	19	True	CATAAA	-20	NA	98445783	98470435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ENSMUST00000035034.10	chr9	-	1197	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_2	42.1929484387994	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTAATTCGTTTTT	NA	False	NA	-9	True	ATTAAA	-20	NA	98483713	98470782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
ENSMUST00000035037.14	chr9	-	6478	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATTTGTTGTGTAGCC	NA	False	NA	-3	True	AATAAA	-12	NA	99022140	98918706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ENSMUST00000035037.14-0	chr9	-	4818	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	-87	1747	-87	0	multi-exon	FALSE	canonical	3	157	junction_2	24.902380296338	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTGTCTTCTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	99022227	98920453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ENSMUST00000035038.8	chr9	+	1019	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	16.8430252627015	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGTTTGGTTTCATG	3544	False	NA	9	True	AATAAA	-23	NA	98868425	98884074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ENSMUST00000035043.12	chr9	-	4647	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTCCAAGTGACTG	NA	False	NA	6	True	AATAAA	-35	NA	99450952	99360424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUST00000035043.12-0	chr9	-	2692	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	232	1723	0	-1723	multi-exon	FALSE	canonical	3	93	junction_7	54.8151294142266	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACATAGATTTTCTTT	NA	False	NA	-1	True	AGTAAA	-25	NA	99450720	99362147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUST00000035045.15	chr9	-	4701	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTATTTCCTCTTC	3239	False	NA	-4	True	NA	NA	NA	99319434	99267472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ENSMUST00000035045.15-0	chr9	-	1456	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	686	2559	231	0	multi-exon	FALSE	canonical	3	447	junction_5	30.9644957976067	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGGCGAAGCCCCAAG	3925	False	NA	28	True	ATTAAA	-15	NA	99318748	99270031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ENSMUST00000035053.12	chr9	+	1074	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	146.935359937627	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661825	109672042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUST00000035055.15	chr9	+	6091	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	32.471877671397	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTCTGTCCTCTTAG	NA	False	NA	25	True	AATAAA	-25	NA	109760527	109913023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ENSMUST00000035069.14	chr9	-	1223	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_3	3.96074487943871	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTTGGCTCCTTGGACC	8924	False	NA	-5	True	ATTAAA	-25	NA	110453520	110450202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
ENSMUST00000035075.13	chr9	-	1932	6	FSM	ENSMUSG00000032494.13	ENSMUST00000035075.13	1932	6	0	0	0	0	multi-exon	FALSE	canonical	3	3873	junction_3	373.6995584691	6017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775226	110768670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
ENSMUST00000035079.10	chr9	-	2754	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	91.190277259512	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100859	111057322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ENSMUST00000035086.13	chr9	-	5951	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	35.4147936949624	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTGGAGTATGAATTC	NA	False	NA	-9	True	AATAAA	-17	NA	113537327	113480811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ENSMUST00000035090.14	chr9	-	2134	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	0	1330	0	0	multi-exon	FALSE	canonical	3	21	junction_13	8.10139821643304	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCATGTAGAATGGATG	NA	False	NA	-12	True	AGTAAA	-11	NA	113855829	113807104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
ENSMUST00000035092.7	chr9	-	1960	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	6.61513416341649	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGACTGACGGTATGTG	NA	False	NA	1	True	AATAAA	-26	NA	119169107	119164999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
ENSMUST00000035094.14	chr9	+	3832	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGTGATTGGCCACAGTG	NA	False	NA	NA	False	NA	NA	NA	119274008	119294583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ENSMUST00000035094.14-0	chr9	+	2537	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	17	1278	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.8109218637162	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCCTGACTGCATATTT	NA	False	NA	NA	False	AAAAAG	-4	NA	119274025	119293305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ENSMUST00000035099.9	chr9	-	3906	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAACTTGTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	119766631	119754322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ENSMUST00000035099.9-0	chr9	-	2571	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	0	1335	0	-1335	multi-exon	FALSE	canonical	3	103	junction_5	11.0898320546346	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTGTTTGTAACTAAAG	NA	False	NA	-4	True	AATAAA	-15	NA	119766631	119755657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ENSMUST00000035101.9	chr9	-	2906	5	FSM	ENSMUSG00000032515.9	ENSMUST00000035101.9	2906	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	11.4972822875669	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCTTCTTGGTGAGG	NA	False	NA	2	True	AATAAA	-17	NA	119813509	119800228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119813471
ENSMUST00000035105.7	chr9	+	1028	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	100	810	0	0	multi-exon	FALSE	canonical	3	2998	junction_3	1065.2190176464	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956854	119960625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUST00000035106.12	chr9	+	1791	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	17.3173002771474	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGCACTCTGATTGACA	1760	False	NA	NA	False	ATTAAA	-16	NA	119939439	119953570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ENSMUST00000035112.13	chr9	+	7022	17	FSM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	11.4065496535981	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGGTCTTTCTTTGCT	NA	False	NA	9	True	AATACA	-19	NA	121548241	121585909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ENSMUST00000035113.11	chr9	+	577	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	21	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	False	NA	11	True	AATAAA	-16	NA	121539394	121541987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121539538_121539704_121539782_121541630
ENSMUST00000035116.12	chr9	-	2320	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	14.4016722385043	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTTGTTTTTTTAT	NA	False	NA	0	True	NA	NA	NA	100916951	100864084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUST00000035121.14	chr9	+	4328	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	19.0852538254079	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATT	NA	False	NA	17	True	AATAAA	-20	NA	102594866	102610617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ENSMUST00000035142.8	chr9	+	2852	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_7	39.7877019252155	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCACAGTGTGTGACTG	NA	False	NA	52	True	ATTAAA	-32	NA	102712170	102785152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ENSMUST00000035142.8-0	chr9	+	2211	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	-55	696	0	-285	multi-exon	TRUE	canonical	3	312	junction_7	39.7877019252155	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGACACAGATATTTGGA	NA	False	NA	9	True	AATAAA	-16	NA	102712115	102784456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ENSMUST00000035148.13	chr9	+	4116	14	FSM	ENSMUSG00000032548.15	ENSMUST00000035148.13	7122	14	403	2603	-94	-2603	multi-exon	FALSE	canonical	2	4	junction_10	4.55472964402691	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTGGTTGTAAATTTGT	NA	False	NA	NA	False	NA	NA	NA	102885603	102965047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102885915_102923883_102924022_102927342_102927506_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
ENSMUST00000035154.4	chr9	-	891	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	24	2446	0	0	multi-exon	FALSE	canonical	3	36	junction_2	10	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTAGTCACTGTTCT	NA	False	NA	NA	False	ATTAAA	-27	NA	122780041	122776599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122777174_122777989_122778135_122779869
ENSMUST00000035155.8	chr9	+	5007	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTTGTTGACTCTTTCT	233	False	NA	10	True	AATAAA	-23	NA	102989005	103062475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
ENSMUST00000035155.8-0	chr9	+	1493	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	-20	3534	0	-3534	multi-exon	FALSE	canonical	3	16	junction_5	2.35606035749581	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTACATTCTAGTTCTG	213	False	NA	NA	False	ATTAAA	-19	NA	102988985	103058941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
ENSMUST00000035157.10	chr9	-	982	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	8	2074	0	295	multi-exon	FALSE	canonical	3	242	junction_6	16.5873110807294	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCTTGAGTTCTTGAA	NA	False	NA	NA	False	GATAAA	-20	NA	103079328	103067304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUST00000035158.16	chr9	-	2571	17	FSM	ENSMUSG00000032554.16	ENSMUST00000035158.16	2571	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	9.88982273602515	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTCCTGAGCTCAAG	NA	False	NA	73	True	TATAAA	-6	NA	103107643	103085993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103086278_103087693_103087878_103089010_103089196_103092391_103092457_103093012_103093143_103094561_103094733_103096421_103096455_103097000_103097092_103098091_103098244_103099249_103099428_103100133_103100313_103100782_103100839_103102241_103102375_103103159_103103337_103104036_103104146_103105094_103105268_103107372
ENSMUST00000035164.10	chr9	+	5224	28	FSM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_13	76.5309229485215	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	953	False	NA	14	True	AATAAA	-19	NA	103182413	103227627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ENSMUST00000035166.12	chr9	-	2404	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGCTTTGAGATTCTAG	NA	False	NA	-13	True	AATAAA	-18	NA	103940333	103923797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ENSMUST00000035166.12-1	chr9	-	1830	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	0	574	0	477	multi-exon	FALSE	canonical	3	388	junction_1	40.2171790110061	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAATAAAAACATGCC	NA	False	NA	NA	False	NA	NA	NA	103940333	103924371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ENSMUST00000035167.15	chr9	+	5899	27	FSM	ENSMUSG00000032558.20	ENSMUST00000035167.15	5899	27	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	5.77333187568024	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCCAAGTTTAGTCAA	NA	False	NA	14	True	AATAAA	-28	NA	103879744	103921017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_103880361_103881912_103882039_103882654_103882806_103885319_103885473_103886338_103886473_103888799_103888961_103892523_103892681_103893278_103893354_103895301_103895476_103897924_103898029_103898454_103898570_103899860_103900005_103900618_103900717_103901780_103901884_103903100_103903184_103907160_103907300_103909089_103909255_103910526_103910622_103911576_103911700_103912904_103913092_103913237_103913480_103914530_103914607_103915633_103915762_103916532_103916774_103917820_103917947_103918337_103918454_103919150
ENSMUST00000035170.13	chr9	-	7695	56	FSM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	0	317	0	-317	multi-exon	FALSE	canonical	3	149	junction_37	31.3582656798217	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTATGTTCTGTAATT	NA	False	NA	-1	True	AATAAA	-25	NA	104140129	104028797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ENSMUST00000035177.15	chr9	+	3972	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCATCAAAGATGGTG	NA	False	NA	NA	False	AATAAA	-27	NA	104930437	104957087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUST00000035177.15-0	chr9	+	1519	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	31	2422	0	0	multi-exon	FALSE	canonical	3	494	junction_1	31.6489229040682	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGTTGTGAAACAGAACC	NA	False	NA	20	True	ATTAAA	-17	NA	104930468	104954665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUST00000035179.9	chr9	-	1631	3	FSM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	2	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTCTGGCTTCAATG	NA	False	NA	NA	False	ATTAAA	-6	NA	105009023	105006530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_105007710_105008491_105008762_105008841
ENSMUST00000035181.10	chr9	+	2755	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	8.45576726264388	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTGGGTTTTTTTAAAT	NA	False	NA	NA	False	CATAAA	-29	NA	105272590	105282957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ENSMUST00000035194.8	chr9	-	2816	11	FSM	ENSMUSG00000032577.17	ENSMUST00000035194.8	2816	11	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_10	23.3752005338992	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGTTTCTTTATGT	NA	False	NA	-2	True	AATAAA	-24	NA	107167076	107132125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
ENSMUST00000035196.14	chr9	-	2192	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTGCCTCTTTTCACG	NA	False	NA	NA	False	NA	NA	NA	107215549	107204282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ENSMUST00000035196.14-0	chr9	-	1566	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	626	0	0	multi-exon	FALSE	canonical	3	133	junction_9	21.6296093353532	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAATGGTGAGCCAGTA	NA	False	NA	-30	True	AGTAAA	-13	NA	107215549	107204908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ENSMUST00000035199.13	chr9	-	3064	25	FSM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	145.554250815823	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9714	False	NA	-6	True	AAGAAA	-12	NA	107648186	107617698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626996_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ENSMUST00000035201.13	chr9	-	3999	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_19	75.7708882091269	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAAAGTTTTTTTTT	7505	False	NA	NA	False	AATAAA	-22	NA	107750028	107650757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ENSMUST00000035202.4	chr9	+	2042	6	FSM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.62117814289874	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTGTCATTGGTTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	107765380	107780338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107765602_107775870_107776011_107777225_107777715_107778393_107779160_107779814_107779963_107780060
ENSMUST00000035211.14	chr9	+	2262	18	FSM	ENSMUSG00000032591.16	ENSMUST00000035211.14	2262	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	9.09998288906715	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGCTTCTTAGTTTC	6663	False	NA	18	True	CATAAA	-23	NA	107957634	107962202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107957730_107958343_107958492_107958583_107958697_107958782_107958898_107958981_107959119_107959199_107959321_107959401_107959521_107959663_107959860_107960018_107960150_107960227_107960331_107960452_107960590_107960677_107960714_107960792_107960902_107961062_107961141_107961259_107961407_107961486_107961594_107961691_107961832_107961972
ENSMUST00000035214.11	chr9	+	4559	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	50.8700304698159	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6720	False	NA	17	True	AATAAA	-17	NA	107879699	107925981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ENSMUST00000035218.9	chr9	+	3360	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	11.5551215196264	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTAGTGTCCGGTGCTCCC	3150	False	NA	NA	False	AATAAA	-22	NA	108685566	108696043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ENSMUST00000035220.12	chr9	+	4965	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_7	36.5355990781594	827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCTGGTGTGTCTCCT	1303	False	NA	20	True	AATAAA	-20	NA	108569341	108627635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ENSMUST00000035222.6	chr9	+	1783	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_8	102.171118717571	778	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCGTGTGATATTTTCT	5077	False	NA	3	True	NA	NA	NA	108539296	108561840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ENSMUST00000035227.8	chr9	+	2133	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	4.63033476111609	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTCAGCTGCTTGT	NA	False	NA	14	True	NA	NA	NA	108167627	108173697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
ENSMUST00000035230.7	chr9	+	2082	9	FSM	ENSMUSG00000032607.13	ENSMUST00000035230.7	2082	9	0	0	0	0	multi-exon	TRUE	canonical	3	166	junction_5	15.4029218007494	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTCTAGCTTCCTTG	NA	False	NA	21	True	AATAAA	-22	NA	108174068	108179501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108174225_108174326_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ENSMUST00000035232.13	chr9	-	1897	6	FSM	ENSMUSG00000032609.13	ENSMUST00000035232.13	1897	6	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_5	2.71293199325011	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAAATACTGCTCA	NA	False	NA	-28	True	NA	NA	NA	108329576	108324856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108326985_108328074_108328591_108329515
ENSMUST00000035237.12	chr9	+	3662	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_19	65.884562002066	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTCCACGTTAGCTT	NA	False	NA	64	True	CATAAA	-21	NA	108225051	108269744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUST00000035240.7	chr11	+	2260	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTGTGCTAGTCTCC	NA	False	NA	NA	False	ATTAAA	-22	NA	115366492	115381293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115366854_115366947_115367092_115379538
ENSMUST00000035242.9	chr13	-	1168	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_3	95.4118890465364	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6442	False	NA	-22	True	AATAAA	-14	NA	55469758	55467697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUST00000035266.11	chr11	+	2022	3	FSM	ENSMUSG00000078853.9	ENSMUST00000035266.11	2022	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTCTCTTCTTATCT	NA	False	NA	NA	False	AATAAA	-41	NA	58090381	58098417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58090606_58092293_58092544_58096869
ENSMUST00000035269.15	chr19	+	2874	20	FSM	ENSMUSG00000032648.15	ENSMUST00000035269.15	2874	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	7.04005162408672	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTCTGTTGCAAAATA	NA	False	NA	14	True	AATAAA	-24	NA	6434428	6448489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6434752_6435714_6435817_6435895_6435975_6436053_6436158_6436403_6436536_6438092_6438205_6438296_6438380_6438766_6438911_6439189_6439283_6439485_6439633_6439802_6439967_6440360_6440476_6440969_6441072_6441362_6441511_6442708_6442768_6442877_6443020_6443745_6443954_6447607_6447743_6447895_6447963_6448074
ENSMUST00000035276.5	chr7	-	676	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	3852	junction_1	65	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCGATTTTTCTTGAGT	2490	False	NA	-1	True	AATAAA	-18	NA	126859881	126856130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126856509_126858529_126858641_126859694
ENSMUST00000035276.5-0	chr7	-	619	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	57	0	57	0	multi-exon	FALSE	canonical	3	3852	junction_1	65	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCGATTTTTCTTGAGT	2547	False	NA	-1	True	AATAAA	-18	NA	126859824	126856130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126856509_126858529_126858641_126859694
ENSMUST00000035279.4	chr5	+	2836	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.6682900317355	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTGATCAGCTAGCA	NA	False	NA	9	True	AATAAA	-15	NA	112490960	112526280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUST00000035283.11	chr11	-	2450	17	FSM	ENSMUSG00000040667.12	ENSMUST00000035283.11	2450	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	230.176562664403	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	False	NA	-9	True	AATAAA	-39	NA	70860788	70833907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835407_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000035295.6	chr1	-	1852	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	0	196	0	-196	multi-exon	FALSE	canonical	3	1138	junction_1	20.5	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCTTAGTGGAATTTC	NA	False	NA	-9	True	NA	NA	NA	182110369	182103532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182104459_182106540_182107284_182110186
ENSMUST00000035301.7	chr4	+	1135	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	4249	junction_2	22.5	792	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAGCAGAATTTCATCT	NA	False	NA	NA	False	AATACA	-20	NA	63463008	63468987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_63463237_63466821_63466923_63468181
ENSMUST00000035325.15	chr1	-	3348	12	FSM	ENSMUSG00000033684.15	ENSMUST00000035325.15	3348	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	6.25887799202127	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTTGACTTGATCC	NA	False	NA	-1	True	AATAAA	-23	NA	155688635	155653903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ENSMUST00000035336.5	chr14	+	8280	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCAGTGGCTCCTTATT	NA	False	NA	5	True	AATAAA	-15	NA	26760897	26829243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
ENSMUST00000035336.5-0	chr14	+	3269	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	138	4873	0	-96	multi-exon	FALSE	canonical	2	9	junction_1	4.46902922593064	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCTTGTACAGAAATTC	NA	False	NA	NA	False	AGTAAA	-18	NA	26761035	26824370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
ENSMUST00000035340.14	chr14	-	6495	21	FSM	ENSMUSG00000034235.18	ENSMUST00000035340.14	6495	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	19.3087415436636	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTCTTTTACTTTTG	6290	False	NA	2	True	AATAAA	-23	NA	20668422	20598979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20668360
ENSMUST00000035346.14	chr2	-	6399	11	FSM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	23.8863978029338	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGAGCTTCGACTATGT	NA	False	NA	NA	False	AATAAA	-19	NA	153371891	153249381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ENSMUST00000035350.12	chr11	-	3998	9	FSM	ENSMUSG00000049659.16	ENSMUST00000035350.12	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	17.066048165876	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTTTGTCTTTGTA	9260	False	NA	NA	False	AATAAA	-16	NA	20691589	20635083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20636199_20642464_20642589_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684_20677640_20691305
ENSMUST00000035371.9	chr3	+	4334	13	FSM	ENSMUSG00000038486.10	ENSMUST00000035371.9	4334	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.01900690659762	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGTGTCTGCTCCTGG	1754	False	NA	4	True	AATAAA	-25	NA	96088466	96102837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96088620_96091954_96092924_96094288_96094470_96095411_96095564_96095640_96095775_96096377_96096468_96096682_96096794_96096966_96097056_96097598_96097764_96097942_96098077_96099729_96099937_96100504_96100665_96101048
ENSMUST00000035375.14	chr17	-	1371	5	FSM	ENSMUSG00000032717.15	ENSMUST00000035375.14	1371	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.78535710713571	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCATCTCCCCAGGACTC	2092	False	NA	-10	True	AATAAA	-14	NA	48144216	48126260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48127090_48131738_48131967_48135472_48135653_48143868_48143956_48144169
ENSMUST00000035426.7	chr16	+	1611	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTACTTTGGTATCT	NA	False	NA	NA	False	ATTAAA	-32	NA	13489883	13496249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13489943_13494697
ENSMUST00000035427.11	chr2	-	4363	23	FSM	ENSMUSG00000036281.14	ENSMUST00000035427.11	4363	23	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	11.6217948571845	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAATGTATAGCCTT	NA	False	NA	-12	True	AATAAA	-22	NA	26270665	26252785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ENSMUST00000035430.4	chr1	-	3619	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	0	0	0	0	multi-exon	TRUE	canonical	3	321	junction_5	41.9044672439586	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTGCATGTCCTGAAC	NA	False	NA	NA	False	NA	NA	NA	160898228	160868170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUST00000035430.4-0	chr1	-	2715	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	0	904	0	0	multi-exon	FALSE	canonical	3	321	junction_5	41.9044672439586	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTAGAGTCTTCC	NA	False	NA	-16	True	AATGAA	-26	NA	160898228	160869074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUST00000035433.10	chr14	+	829	4	FSM	ENSMUSG00000040726.11	ENSMUST00000035433.10	1141	4	312	0	312	0	multi-exon	FALSE	canonical	3	134	junction_1	19.2584757675391	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTATTTTAATATACTTT	NA	False	NA	NA	False	AATAAA	-18	NA	26722630	26724286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_26722834_26723328_26723529_26723775_26723878_26723962
ENSMUST00000035458.15	chr7	-	4685	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	43.8843333177548	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121260	129993222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUST00000035462.7	chr1	-	5759	2	FSM	ENSMUSG00000038702.7	ENSMUST00000035462.7	5759	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACGTTGTATAGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	111792648	111786435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_111791371_111791824
ENSMUST00000035471.9	chr17	+	9526	63	FSM	ENSMUSG00000032796.9	ENSMUST00000035471.9	9526	63	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_11	42.4970342357505	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTCTCCTCTTTTGA	NA	False	NA	22	True	ATTAAA	-22	NA	68004253	68129642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_68004412_68023688_68023860_68024156_68024270_68044468_68044712_68045705_68045886_68049019_68049110_68050269_68050388_68052040_68052220_68052844_68052951_68053742_68053904_68055038_68055180_68057511_68057686_68059376_68059479_68059772_68059985_68060745_68060858_68063661_68063773_68068597_68068726_68070765_68070853_68071624_68071837_68073947_68074055_68074379_68074561_68075294_68075432_68076374_68076612_68077950_68078095_68079656_68079837_68080681_68080868_68081458_68081587_68082765_68082887_68083902_68084041_68086043_68086166_68087523_68087611_68087873_68088068_68089014_68089158_68090988_68091079_68092045_68092158_68092992_68093156_68097813_68098022_68098204_68098322_68098439_68098604_68101189_68101326_68102194_68102289_68103691_68103809_68105521_68105705_68105977_68106133_68107753_68107898_68109890_68110025_68111394_68111546_68112356_68112482_68114772_68114924_68116205_68116351_68116834_68116977_68117064_68117180_68117324_68117496_68118433_68118586_68119320_68119507_68120847_68120984_68122172_68122286_68122849_68123040_68123997_68124157_68124521_68124676_68125578_68125713_68128512_68128736_68129283
ENSMUST00000035481.5	chr2	+	1325	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	75.455652906562	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTAGGTTTGTGTGTT	3825	False	NA	45	True	NA	NA	NA	128971619	128976054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ENSMUST00000035484.11	chr9	-	3387	5	FSM	ENSMUSG00000032803.16	ENSMUST00000035484.11	3387	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	174.534201519358	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGCTTTCTGTTGAAA	NA	False	NA	2	True	AATAAA	-24	NA	103243039	103230292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ENSMUST00000035493.14	chr6	+	2147	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	2150	junction_1	1335.10981654028	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGCACAGCTTATGTA	3734	False	NA	NA	False	AATAAA	-14	NA	117883755	117902580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ENSMUST00000035495.15	chr8	-	4485	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_17	20.5305065860605	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGGCCTTATTGT	NA	False	NA	-4	True	AAGAAA	-17	NA	124045315	123995038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ENSMUST00000035497.5	chr4	+	1443	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	39	3531	0	0	multi-exon	FALSE	canonical	3	15	junction_8	4.26296135405575	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTTCCCCATTATTCTC	2402	False	NA	7	True	AATATA	-17	NA	125952396	125982457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUST00000035519.12	chr3	+	4077	12	FSM	ENSMUSG00000038495.15	ENSMUST00000035519.12	8043	12	0	3966	0	-3966	multi-exon	FALSE	canonical	3	30	junction_1	14.2242953608394	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011838	96064480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96012132_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ENSMUST00000035540.9	chr13	-	5494	22	FSM	ENSMUSG00000038025.9	ENSMUST00000035540.9	5494	22	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	5.86043268042677	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGTGTCTGTCGTGCTT	NA	False	NA	0	True	AGTAAA	-23	NA	49024595	48955225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961353_48966384_48966546_48967178_48967250_48967341_48967521_48969430_48969547_48969910_48970031_48970981_48971342_48971777_48971868_48973015_48973108_48973516_48973624_48974001_48974090_48975006_48975170_48976424_48976612_48979527_48979670_48982261_48982423_48985479_48985595_48988685_48988772_49024143
ENSMUST00000035560.9	chr1	+	1490	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	4	4098	0	137	multi-exon	TRUE	canonical	3	134	junction_7	98.5478232605254	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGACGTCTCAGCAACT	NA	False	NA	28	True	AATAAA	-20	NA	155433871	155562978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
ENSMUST00000035579.10	chr5	+	3883	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_9	49.846707161818	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCAGTGACCTGCCCGCT	NA	False	NA	10	True	AATAAA	-21	NA	118114848	118148265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ENSMUST00000035597.10	chr10	+	2869	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	7.35298079221021	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691108	80704542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
ENSMUST00000035604.13	chr11	-	4922	28	FSM	ENSMUSG00000037275.15	ENSMUST00000035604.13	4922	28	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	43.3607067704434	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTCGTTCTGTGG	NA	False	NA	-34	True	TATAAA	-12	NA	58059365	58012115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ENSMUST00000035606.10	chr10	+	7760	42	FSM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_25	18.281297269701	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTCCTGTCTTAGACG	NA	False	NA	NA	False	TATAAA	-21	NA	50468764	50727581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ENSMUST00000035612.7	chr14	-	3725	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	38.4373191052654	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391260	70375616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ENSMUST00000035635.10	chr5	+	7387	16	FSM	ENSMUSG00000034663.14	ENSMUST00000035635.10	7387	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	6.52856969191738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTTTGGAGTTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	97145547	97239726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ENSMUST00000035635.10-0	chr5	+	3816	16	FSM	ENSMUSG00000034663.14	ENSMUST00000035635.10	7387	16	0	3571	0	-3571	multi-exon	FALSE	canonical	0	0	junction_13	6.52856969191738	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTAGTAAGTGGATGCC	NA	False	NA	NA	False	AATAAA	-20	NA	97145547	97236155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ENSMUST00000035645.12	chr4	+	5300	12	FSM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	6.00550711451409	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	NA	False	NA	17	True	AATAAA	-19	NA	43381978	43427088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ENSMUST00000035648.6	chr18	-	2461	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	22	2282	0	-2282	multi-exon	FALSE	canonical	3	312	junction_1	11.8977121983832	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCAGAATAACTTATTG	NA	False	NA	-11	True	AATAAA	-18	NA	46874624	46865492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
ENSMUST00000035657.9	chr12	+	1747	10	FSM	ENSMUSG00000036613.9	ENSMUST00000035657.9	1747	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	106.926188918072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGCTCTTTGTTTGTTTT	1150	False	NA	7	True	NA	NA	NA	28801853	28917490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28843853_28843936_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUST00000035667.9	chr4	+	3752	5	FSM	ENSMUSG00000041000.9	ENSMUST00000035667.9	3752	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	1.78535710713571	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACGTTCCATTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	128777380	128805121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_128778371_128790612_128790709_128794338_128794596_128796265_128796382_128802828
ENSMUST00000035672.5	chr16	-	6217	22	FSM	ENSMUSG00000039457.5	ENSMUST00000035672.5	6217	22	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	2.19564607302829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTGGAAACCTCAAAACA	NA	False	NA	NA	False	NA	NA	NA	4950285	4904154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4907693_4909708_4909802_4910228_4910346_4911059_4911144_4912272_4912424_4914489_4914684_4915508_4915648_4915738_4915918_4917846_4918005_4918194_4918293_4919237_4919390_4920157_4920305_4920419_4920543_4922314_4922411_4922537_4922646_4922727_4922890_4923786_4923829_4923914_4924035_4924625_4924747_4925320_4925476_4930855_4930956_4950145
ENSMUST00000035672.5-0	chr16	-	6057	22	FSM	ENSMUSG00000039457.5	ENSMUST00000035672.5	6217	22	0	160	0	-160	multi-exon	FALSE	canonical	2	2	junction_13	2.19564607302829	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCACAGCAAGTATGACT	NA	False	NA	NA	False	AATAAA	-20	NA	4950285	4904314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4907693_4909708_4909802_4910228_4910346_4911059_4911144_4912272_4912424_4914489_4914684_4915508_4915648_4915738_4915918_4917846_4918005_4918194_4918293_4919237_4919390_4920157_4920305_4920419_4920543_4922314_4922411_4922537_4922646_4922727_4922890_4923786_4923829_4923914_4924035_4924625_4924747_4925320_4925476_4930855_4930956_4950145
ENSMUST00000035673.8	chr6	+	2792	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	12	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGTGTTGTGTTACCT	158	False	NA	19	True	AATAAA	-19	NA	113600919	113608594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113601340_113605052_113605176_113606345
ENSMUST00000035682.16	chr16	+	3322	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCTTTACTGTCTAAA	NA	False	NA	NA	False	NA	NA	NA	16887559	16904600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ENSMUST00000035682.16-0	chr16	+	2465	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	462	395	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.0705925445435	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGATTTTGCGTTGGC	NA	False	NA	NA	False	TATAAA	-20	NA	16888021	16904205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ENSMUST00000035700.14	chr9	+	3277	11	FSM	ENSMUSG00000032936.14	ENSMUST00000035700.14	3277	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	7.3729234364667	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTTGCCTTTGCTTCCT	NA	False	NA	18	True	AATAAA	-26	NA	107812872	107826890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823064_107823277_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ENSMUST00000035721.14	chr2	-	3522	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGCTGCTTGATTCA	NA	False	NA	98	True	AGTAAA	-23	NA	4656897	4626868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUST00000035721.14-1	chr2	-	3378	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	-20	164	0	-164	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTTTGTTTCAAGA	NA	False	NA	-5	True	ATTAAA	-25	NA	4656917	4627032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUST00000035724.5	chr4	-	5387	22	FSM	ENSMUSG00000039158.12	ENSMUST00000035724.5	5387	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	11.9996220650992	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGGCTGTGCTGTGT	NA	False	NA	NA	False	AATAAA	-38	NA	63321591	63285361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63321455
ENSMUST00000035725.7	chr6	+	1095	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	10.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATGTTTATGATCTGTT	NA	False	NA	11	True	AATAAA	-21	NA	113581732	113593912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113581858_113592736_113592820_113593025
ENSMUST00000035725.7-0	chr6	+	838	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	0	257	0	-257	multi-exon	FALSE	canonical	3	441	junction_2	10.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGACTGTGGTGGC	NA	False	NA	22	True	AATAAA	-15	NA	113581732	113593655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113581858_113592736_113592820_113593025
ENSMUST00000035735.11	chr10	+	934	4	FSM	ENSMUSG00000040280.11	ENSMUST00000035735.11	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	3.29983164553722	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	NA	False	NA	NA	False	AATACA	-21	NA	127350835	127353023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127350908_127351267_127351357_127352133_127352195_127352311
ENSMUST00000035766.13	chrX	+	4167	20	FSM	ENSMUSG00000036769.15	ENSMUST00000035766.13	4167	20	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	9.86248944541599	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAATAAATGATTGTC	NA	False	NA	NA	False	ATTAAA	-12	NA	23559289	23672229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUST00000035771.5	chr7	-	1309	7	FSM	ENSMUSG00000042502.11	ENSMUST00000035771.5	1309	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	224.819680830858	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCCTTTTGGCTTCAC	5583	False	NA	-4	True	AATAAA	-40	NA	126795047	126792829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126794958
ENSMUST00000035773.14	chr12	-	5607	23	FSM	ENSMUSG00000034801.14	ENSMUST00000035773.14	5607	23	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_15	13.7125899802678	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTGCAATATTGTT	NA	False	NA	-5	True	AATAAA	-21	NA	69728626	69630539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664955_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ENSMUST00000035775.9	chr10	-	468	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_3	751.769616009822	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	False	NA	-13	True	AATAAA	-25	NA	80691043	80688658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
ENSMUST00000035776.10	chr3	+	2429	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_6	112.264073604258	1675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGCCTCTTGGAATAA	NA	False	NA	23	True	AATAAA	-19	NA	122068036	122078920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ENSMUST00000035777.10	chr8	+	4998	5	FSM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4.52769256906871	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCAGCCTCTTTTCTT	NA	False	NA	20	True	AATAAA	-21	NA	114362466	114371811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ENSMUST00000035779.15	chr1	+	3950	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_2	98.3136477470617	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCTTCAGAGTCTTGT	NA	False	NA	7	True	AATAAA	-19	NA	78635541	78685460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUST00000035779.15-0	chr1	+	3116	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	58	776	0	0	multi-exon	FALSE	canonical	3	149	junction_2	98.3136477470617	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTTAAGAAATTTCGAA	NA	False	NA	3	True	AATAAA	-14	NA	78635599	78684684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUST00000035780.4	chr4	+	1915	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	14.2560294261761	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTTAGTTTGTAG	42	False	NA	16	True	AATAAA	-28	NA	103171008	103223640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ENSMUST00000035785.9	chr3	+	1189	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	0	0	0	0	multi-exon	FALSE	canonical	3	4285	junction_2	286.022180083993	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	3620	False	NA	15	True	AATAAA	-17	NA	88486977	88495726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUST00000035797.16	chr17	-	1575	9	FSM	ENSMUSG00000079657.11	ENSMUST00000035797.16	1575	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	7.78520230951001	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGGAAAACCACCTCCT	NA	False	NA	-2	True	AATAAA	-23	NA	24752862	24748027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24748618_24748714_24748792_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
ENSMUST00000035799.6	chr5	+	3788	2	FSM	ENSMUSG00000039899.6	ENSMUST00000035799.6	3788	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTCGATGTGGAAACAGC	NA	False	NA	NA	False	AATAAA	-19	NA	21577639	21583372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_21578307_21580251
ENSMUST00000035799.6-0	chr5	+	2681	2	FSM	ENSMUSG00000039899.6	ENSMUST00000035799.6	3788	2	56	1051	56	-1051	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACAAAGAGCAAGATAC	NA	False	NA	NA	False	NA	NA	NA	21577695	21582321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_21578307_21580251
ENSMUST00000035804.9	chr18	-	1595	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGATGCACATGTTTTT	2577	False	NA	8	True	AATAAA	-30	NA	46861462	46846259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
ENSMUST00000035804.9-0	chr18	-	1240	5	FSM	ENSMUSG00000033022.9	ENSMUST00000035804.9	1595	5	41	314	0	-303	multi-exon	FALSE	canonical	3	151	junction_1	18.3166590840142	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCACGTGTCTGTTTTCA	2618	False	NA	-3	True	AGTAAA	-17	NA	46861421	46846573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46847029_46848663_46848834_46853353_46853509_46856384_46856463_46861039
ENSMUST00000035812.14	chr2	+	2014	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	0	2553	0	-2553	multi-exon	FALSE	canonical	3	70	junction_4	11.1118055338555	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAAACAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	128907861	128935650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
ENSMUST00000035822.2	chr19	-	2045	3	FSM	ENSMUSG00000033033.11	ENSMUST00000035822.2	2458	3	0	413	0	-413	multi-exon	FALSE	canonical	2	8	junction_2	1	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTAGACAGGGTATTTGT	5329	False	NA	-5	True	GATAAA	-18	NA	47126733	47120674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47121613_47123787_47124505_47126343
ENSMUST00000035824.11	chr13	-	4402	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	3.87138919781874	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACCCCGTCTTGTGGTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	48779140	48731347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
ENSMUST00000035836.14	chr7	-	4995	29	FSM	ENSMUSG00000032737.14	ENSMUST00000035836.14	4995	29	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_28	32.2947996066341	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCCGTTCCCCGACG	NA	False	NA	-1	True	AATAAA	-43	NA	101487436	101471838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487095
ENSMUST00000035840.6	chr2	-	4706	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_5	28.4648543626047	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGCTATTCCTTTGTT	NA	False	NA	NA	False	AATACA	-15	NA	84545524	84518313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ENSMUST00000035842.7	chr6	-	6460	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTGTGTTACTGTTT	8606	False	NA	0	True	AATAAA	-18	NA	116650913	116609968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ENSMUST00000035842.7-0	chr6	-	4679	11	FSM	ENSMUSG00000042129.9	ENSMUST00000035842.7	6460	11	154	1627	0	-1627	multi-exon	FALSE	canonical	3	10	junction_1	5.29528091794949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTCTGTTAAGTGTGT	8760	False	NA	NA	False	NA	NA	NA	116650759	116611595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_116615260_116616401_116616500_116617193_116617316_116618388_116618441_116618645_116618748_116622056_116622218_116622846_116622939_116624527_116624671_116636485_116636562_116638803_116638898_116650684
ENSMUST00000035850.8	chr9	+	6062	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_15	17.5635277962748	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGCTCTATGTGTGTTT	NA	False	NA	NA	False	TATAAA	-18	NA	53448346	53485642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ENSMUST00000035852.14	chr5	+	2222	17	FSM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	16.2498798072478	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTTTGTGTGTGTGT	7077	False	NA	32	True	AATAAA	-25	NA	137786059	137820883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ENSMUST00000035861.6	chr6	-	3139	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	30.6939009504422	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGACGTGGGTAGGT	NA	False	NA	-16	True	AATAAA	-29	NA	124391996	124373790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ENSMUST00000035871.15	chr2	+	4811	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	34.6634613902818	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTTTCCGGTCTACTCT	2334	False	NA	10	True	AATAAA	-15	NA	127089827	127103027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
ENSMUST00000035899.8	chr13	-	1721	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	48	3865	0	-3865	multi-exon	FALSE	canonical	3	63	junction_3	8.98262211161084	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATAAGTATTTGAGATT	NA	False	NA	-28	True	ATTAAA	-15	NA	38819037	38786681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
ENSMUST00000035925.7	chr8	-	1246	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	2.91547594742265	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCCTGGTGGTTTTTCTG	NA	False	NA	-6	True	NA	NA	NA	106937565	106927348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
ENSMUST00000035930.11	chr6	-	3881	7	FSM	ENSMUSG00000039841.15	ENSMUST00000035930.11	3881	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.7424685126915	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGCTAAATGTGCTTC	7	True	NA	NA	False	AATAAA	-15	NA	28398004	28240238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28312505_28312589_28397670
ENSMUST00000035934.7	chr13	-	2411	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	0	2511	0	0	multi-exon	FALSE	canonical	3	174	junction_12	37.5695651055774	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTAGGTGCTTGGTGTG	7173	False	NA	-11	True	ATTAAA	-11	NA	74356828	74320117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ENSMUST00000035960.13-1	chr8	-	2087	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	456	-530	0	530	multi-exon	FALSE	canonical	3	458	junction_6	24.6578587878185	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTCTTGGTCATGAAG	594	False	NA	-1	True	NA	NA	NA	71725122	71703238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUST00000035973.5	chrX	-	2996	7	FSM	ENSMUSG00000036782.14	ENSMUST00000035973.5	2996	7	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_6	147.505272975428	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23181418	23085524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368
ENSMUST00000035977.9	chr7	+	7199	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_6	27.6640028223357	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATTACTTTCCCAGTT	1924	False	NA	16	True	ATTAAA	-26	NA	79309943	79347896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ENSMUST00000035982.8	chr4	-	4832	23	FSM	ENSMUSG00000041058.16	ENSMUST00000035982.8	4832	23	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_17	21.8808286213531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTTCAATTATCCTCC	9434	False	NA	NA	False	AATGAA	-23	NA	19678448	19609672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344
ENSMUST00000035983.12	chr5	+	810	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	0	1046	0	0	multi-exon	FALSE	canonical	3	6955	junction_1	2705.44403749181	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769699	146772796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUST00000035985.8	chr5	-	2831	5	FSM	ENSMUSG00000066640.12	ENSMUST00000035985.8	2831	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.28490254498827	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTCTCCAGGATGTT	NA	False	NA	-2	True	NA	NA	NA	142880993	142857543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
ENSMUST00000035987.9	chr12	-	4564	11	FSM	ENSMUSG00000042724.9	ENSMUST00000035987.9	4564	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	4.27083130081252	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGCCGTGAGGCAGTAG	NA	False	NA	NA	False	AGTAAA	-20	NA	81827949	81767783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ENSMUST00000035988.16	chr13	-	2843	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_6	103.236992125933	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGAGTCTTACTTTCTA	NA	False	NA	NA	False	TTTAAA	-17	NA	38712466	38684054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ENSMUST00000036003.8	chr6	+	6267	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	10.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATGTGTGTGTGGTGA	NA	False	NA	NA	False	AATAAA	-17	NA	146992876	147014276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146993866_147003063_147003258_147009192
ENSMUST00000036003.8-0	chr6	+	1547	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	114	4606	114	0	multi-exon	FALSE	canonical	3	50	junction_2	10.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGTTCAAGGGGGAAAA	NA	False	NA	NA	False	AATAAA	-39	NA	146992990	147009670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146993866_147003063_147003258_147009192
ENSMUST00000036004.16	chr15	+	1918	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_7	4396.07925429012	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148858	103153382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ENSMUST00000036018.6	chr7	-	2037	2	FSM	ENSMUSG00000040891.7	ENSMUST00000036018.6	2037	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTAGTGTCTTTTTCTT	NA	False	NA	-3	True	ATTAAA	-16	NA	18757463	18747208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_18749056_18757273
ENSMUST00000036023.3	chr3	-	593	2	FSM	ENSMUSG00000037910.3	ENSMUST00000036023.3	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTTTAGATGTGTCT	NA	False	NA	0	True	AATAAA	-42	NA	48563537	48560166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_48560355_48563132
ENSMUST00000036025.16	chr1	+	7274	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	11.149101195474	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTTTCATTTAAGAATA	NA	False	NA	10	True	NA	NA	NA	121358777	121434189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ENSMUST00000036033.14	chr10	-	6322	38	FSM	ENSMUSG00000020231.16	ENSMUST00000036033.14	6322	38	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_36	7.13728468849439	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGCATTTTGAAATGT	NA	False	NA	-14	True	AATAAA	-16	NA	76181094	76098884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138130_76140849_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76157323_76157441_76163535_76163608_76180940
ENSMUST00000036041.15	chr14	-	2673	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_4	12.8308372870802	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGCTGTGAAGTGGC	NA	False	NA	-22	True	AATAAA	-16	NA	55344050	55336306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ENSMUST00000036041.15-0	chr14	-	2544	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	0	129	0	75	multi-exon	FALSE	canonical	3	99	junction_4	12.8308372870802	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAACTTTATTTAAAG	NA	False	NA	-22	True	AATAAA	-17	NA	55344050	55336435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ENSMUST00000036044.9	chr10	+	6957	35	FSM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_22	26.4839345439331	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATAGTGGGACTGTTTT	NA	False	NA	9	True	AATAAA	-21	NA	115220863	115268677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ENSMUST00000036049.6	chr8	-	3141	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_4	18.9274932307477	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCGCCACCAGAGGGT	NA	False	NA	-10	True	AATAAA	-19	NA	120301922	120288727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
ENSMUST00000036074.15	chr8	+	3933	21	FSM	ENSMUSG00000036246.15	ENSMUST00000036074.15	3933	21	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_20	2.88790581563873	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTCTTTGTGCTGGAA	NA	False	NA	NA	False	NA	NA	NA	70261328	70274520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
ENSMUST00000036092.10	chr5	-	4221	15	FSM	ENSMUSG00000038319.15	ENSMUST00000036092.10	4221	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	4.79157423749955	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCACCTGCTGTATCTC	NA	False	NA	-6	True	NA	NA	NA	24556602	24524586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24535908_24536121_24536660_24537111_24537889_24538055_24553308_24553540_24556205
ENSMUST00000036111.10	chr6	+	1070	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	0	3092	0	0	multi-exon	FALSE	canonical	3	595	junction_4	51.0230040155958	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTATTGTCTTACGTCA	NA	False	NA	12	True	TATAAA	-14	NA	146944261	146972397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ENSMUST00000036116.6	chr12	+	2042	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAATGTTAATAGGATT	NA	False	NA	NA	False	ATTAAA	-12	NA	81678142	81711715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_81678576_81707339_81707523_81710289
ENSMUST00000036116.6-0	chr12	+	4778	3	FSM	ENSMUSG00000042734.7	ENSMUST00000036116.6	2042	3	-120	-2616	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCTATGTTGCTAGCT	NA	False	NA	8	True	CATAAA	-20	NA	81678022	81714331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_81678576_81707339_81707523_81710289
ENSMUST00000036125.10	chr5	-	2367	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	0	0	0	0	multi-exon	FALSE	canonical	3	1750	junction_2	182.920310517996	2600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATGCTTGTCTTTCTGG	10021	False	NA	-4	True	AATAAA	-18	NA	134668201	134648730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUST00000036126.7	chr14	+	1894	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_5	52.2695577431708	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045297	51058758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUST00000036153.12	chr1	+	1552	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	518	217	0	0	multi-exon	FALSE	canonical	3	708	junction_7	24.8185250100297	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCTCTAGAAATTT	NA	False	NA	25	True	AATAAA	-30	NA	90531220	90540846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ENSMUST00000036156.6	chr4	-	3595	20	FSM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_19	11.8213853822033	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTCCTTTCTCTGT	NA	False	NA	0	True	AGTAAA	-19	NA	117772196	117751682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ENSMUST00000036158.7	chr18	+	2462	3	FSM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	96	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACAGTTGTCCTGTCTTC	NA	False	NA	16	True	AATAAA	-34	NA	36812644	36816911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36812677_36813568_36813668_36814580
ENSMUST00000036161.12	chr16	-	6431	55	FSM	ENSMUSG00000041720.15	ENSMUST00000036161.12	6431	55	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_54	30.1710941888786	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTTTTGTTATGTA	NA	False	NA	-23	True	AATAAA	-16	NA	17224178	17098214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17224118
ENSMUST00000036172.10	chr1	+	4002	5	FSM	ENSMUSG00000032908.10	ENSMUST00000036172.10	4002	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.12132034355964	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTCTGTGGATTT	NA	False	NA	NA	False	AATAAA	-44	NA	78286981	78396926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_78287140_78336707_78336867_78367111_78367292_78369995_78370086_78393511
ENSMUST00000036176.16	chr15	-	4500	12	FSM	ENSMUSG00000033697.17	ENSMUST00000036176.16	4500	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	14.9749101461177	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8256	False	NA	-4	True	AATAAA	-17	NA	76702283	76608184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ENSMUST00000036177.9	chr5	+	3539	2	FSM	ENSMUSG00000039095.9	ENSMUST00000036177.9	3539	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGAAATAACTCT	2429	False	NA	NA	False	TTTAAA	-18	NA	28370691	28377164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_28372183_28375116
ENSMUST00000036187.9	chr2	-	2559	13	FSM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	31.8210054663408	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCAGTTTTTTGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	26127537	26099136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26099806_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ENSMUST00000036188.8	chr4	-	2755	6	FSM	ENSMUSG00000042677.8	ENSMUST00000036188.8	2755	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	0.748331477354788	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGCCAGTCGTTTTGA	NA	False	NA	NA	False	AAGAAA	-7	NA	125021633	125012215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_125013938_125014118_125014226_125014664_125014900_125016046_125016187_125020398_125020876_125021559
ENSMUST00000036195.13	chr4	-	4021	12	FSM	ENSMUSG00000028521.18	ENSMUST00000036195.13	4021	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	6.03022689155527	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAATGTGTGTTAGAAT	5658	False	NA	-5	True	AATAAA	-10	NA	103072000	103027852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_103030978_103042018_103042102_103046983_103047063_103048028_103048097_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ENSMUST00000036206.14	chr5	-	2473	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTGGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	124939488	124911481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
ENSMUST00000036206.14-0	chr5	-	1683	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	228	562	228	-562	multi-exon	FALSE	canonical	3	158	junction_3	9.0921211313239	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTTTTCCTCCGAGTCT	NA	False	NA	-2	True	NA	NA	NA	124939260	124912043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
ENSMUST00000036210.7	chr16	-	2758	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_10	82.4351866620074	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGCTCCTCATTTACT	6230	False	NA	-1	True	NA	NA	NA	38370620	38345498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ENSMUST00000036226.6	chr18	-	5726	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	21.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTGTGCTCTCATTAA	NA	False	NA	-3	True	AATAAA	-18	NA	46659038	46634812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46639457_46657168_46657897_46658684
ENSMUST00000036226.6-0	chr18	-	3648	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	0	2078	0	-2078	multi-exon	FALSE	canonical	3	135	junction_1	21.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTGTCCCCTTAATG	NA	False	NA	-2	True	ATTAAA	-18	NA	46659038	46636890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46639457_46657168_46657897_46658684
ENSMUST00000036229.13	chr18	-	3713	13	FSM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_8	21.1126278694898	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTCTCTGGTGTGTCAC	NA	False	NA	-3	True	AATAAA	-18	NA	80512910	80451173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ENSMUST00000036236.15	chr6	+	2161	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_6	79.6350617225576	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTCAAGCATTTTGTAA	NA	False	NA	8	True	CATAAA	-5	NA	50087228	50175567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ENSMUST00000036247.10	chr15	-	1754	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	1	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTATTGACTTTAAATGA	9309	False	NA	-4	True	ATTAAA	-23	NA	76608040	76605664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76607184_76607370_76607420_76607854
ENSMUST00000036248.13	chr2	-	4538	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCCCTTTTTTGGCTG	1082	False	NA	NA	False	AATAAA	-25	NA	173118326	173066250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ENSMUST00000036248.13-0	chr2	-	2174	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	0	2364	0	1224	multi-exon	FALSE	canonical	3	84	junction_3	9.39266853573691	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTAGTTTTTTTTTTTT	1082	False	NA	-6	True	AATAAA	-14	NA	173118326	173068614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ENSMUST00000036267.8	chr9	-	3063	2	FSM	ENSMUSG00000033350.8	ENSMUST00000036267.8	7328	2	-563	4828	-563	-4828	multi-exon	FALSE	canonical	3	17	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAGATAATAAATA	NA	False	NA	-38	True	NA	NA	NA	95289338	95286172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_95288527_95288629
ENSMUST00000036274.8	chr7	-	1497	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	78	1334	0	0	multi-exon	FALSE	canonical	2	1599	junction_2	370.901856964885	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAGTCTTGAAAGAAGG	NA	False	NA	-2	True	AATAAA	-19	NA	99508106	99488109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ENSMUST00000036299.14	chr11	-	4495	23	FSM	ENSMUSG00000040712.17	ENSMUST00000036299.14	4495	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.2001660981453	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCGGCCTCTCTCTGC	8379	False	NA	0	True	ATTAAA	-17	NA	70578779	70560288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561716_70561738_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574192_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ENSMUST00000036320.12	chr11	+	1790	9	FSM	ENSMUSG00000034175.14	ENSMUST00000036320.12	1790	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	83.1500901983876	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	False	NA	16	True	AATAAA	-17	NA	5049438	5056091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055314_5055432_5055718_5055799
ENSMUST00000036328.9	chr14	-	9001	10	FSM	ENSMUSG00000040721.10	ENSMUST00000036328.9	10397	10	0	1396	0	-1396	multi-exon	TRUE	canonical	3	30	junction_7	9.6966329907873	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTCTTTTTGTTTTG	NA	False	NA	-25	True	AATATA	-39	NA	55329781	55299114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55301029_55301261_55304739_55304941_55305069_55305564_55305766_55307595_55307655_55308017_55308093_55309315_55309557_55310003_55310522_55310669_55312742_55329464
ENSMUST00000036329.12	chr1	-	2640	14	FSM	ENSMUSG00000038733.15	ENSMUST00000036329.12	2640	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	43.02703154747	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATACATTTGGAATCT	NA	False	NA	-20	True	AATAAA	-34	NA	181038991	181004661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030790_181036615_181036673_181036777_181036878_181038640
ENSMUST00000036331.7	chr7	-	3341	3	FSM	ENSMUSG00000035239.7	ENSMUST00000036331.7	3341	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTGGAGTGAGTTAGAT	6025	False	NA	NA	False	AATAAA	-15	NA	99477624	99460645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99463515_99472528_99472741_99477364
ENSMUST00000036333.14	chrX	-	4146	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	6.21992765231236	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTATTTGGGAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	76839884	76805016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ENSMUST00000036340.12	chr6	+	5512	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	0	0	0	0	multi-exon	TRUE	canonical	3	237	junction_19	37.6323336574577	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	False	NA	11	True	ATTAAA	-16	NA	113508642	113573978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ENSMUST00000036354.7	chrX	-	2563	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAATGGCATCATTTGG	NA	False	NA	-4	True	ATTAAA	-22	NA	98514298	98509719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_98512207_98514222
ENSMUST00000036355.13	chr16	-	5483	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_15	7.72315083521806	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGTGGAAACACTTTC	NA	False	NA	-10	True	ATTAAA	-13	NA	45664741	45566605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ENSMUST00000036360.13	chr3	-	752	6	FSM	ENSMUSG00000038543.14	ENSMUST00000036360.13	752	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	8.93532316147547	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTGCCTACTTCTTA	NA	False	NA	NA	False	NA	NA	NA	95799267	95791269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95791550_95792281_95792381_95795452_95795609_95796168_95796228_95797034_95797122_95799196
ENSMUST00000036372.8	chr7	+	4176	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	21	532	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTTGTCTCATTATTT	NA	False	NA	29	True	AATAAA	-36	NA	65759262	65823546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65759976_65774989_65775486_65820579
ENSMUST00000036376.13	chr11	+	1939	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	22.5437845585479	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	16	True	AATAAA	-18	NA	102175756	102180063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ENSMUST00000036380.14	chr4	-	1000	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	0	0	0	0	multi-exon	FALSE	canonical	3	2123	junction_7	187.196393650942	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744526	117741522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUST00000036381.10	chr14	-	2649	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_7	17.0583602471336	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69969983	69954448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ENSMUST00000036382.13	chr9	-	4209	4	FSM	ENSMUSG00000020258.17	ENSMUST00000036382.13	4209	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACATGTGTCTTACTAAT	5475	False	NA	-3	True	AATAAA	-21	NA	106035317	106030055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687
ENSMUST00000036407.6	chr19	+	5951	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_15	12.0260134708057	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAACATTGTCGTATA	NA	False	NA	2	True	AATAAA	-13	NA	57349111	57378018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ENSMUST00000036418.10	chr3	-	1398	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	32.3604697122894	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAATGCTTTTTTTTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	95789543	95785816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
ENSMUST00000036426.13	chr9	+	3444	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTACTGTGTTTGTATA	NA	False	NA	4	True	AATAAA	-19	NA	86625701	86640496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_86625860_86637210
ENSMUST00000036426.13-0	chr9	+	2529	2	FSM	ENSMUSG00000033491.14	ENSMUST00000036426.13	3444	2	0	915	0	-744	multi-exon	FALSE	canonical	3	21	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTTGTGGGTG	NA	False	NA	NA	False	NA	NA	NA	86625701	86639581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_86625860_86637210
ENSMUST00000036437.13	chr5	+	3431	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATCTTTATTCTATT	NA	False	NA	NA	False	ATTAAA	-31	NA	96357973	96414568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUST00000036437.13-0	chr5	+	1109	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	29	2293	0	-2293	multi-exon	FALSE	canonical	3	666	junction_1	44.6738178355063	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCTCCTCATGTTTTC	NA	False	NA	22	True	TATAAA	-16	NA	96358002	96412275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUST00000036450.8	chr2	-	7671	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTACTGCTGAGGAAATC	6979	False	NA	NA	False	AATAAA	-22	NA	121948867	121884000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ENSMUST00000036450.8-0	chr2	-	7397	40	FSM	ENSMUSG00000033396.14	ENSMUST00000036450.8	7671	40	0	274	0	-274	multi-exon	FALSE	canonical	0	0	junction_26	28.2050349648808	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTTGAGTTGAAAAG	6979	False	NA	-9	True	AATAAA	-18	NA	121948867	121884274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121890651_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925011_121926070_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ENSMUST00000036456.8	chr13	-	2509	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	0	1132	0	0	multi-exon	FALSE	canonical	3	27	junction_5	28.6590098045136	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210418	74185750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ENSMUST00000036462.12	chr4	-	3074	9	FSM	ENSMUSG00000036002.13	ENSMUST00000036462.12	3074	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	15.8779524813497	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	NA	False	NA	2	True	AATAAA	-21	NA	43046220	43032413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43046103
ENSMUST00000036470.14	chr2	-	1870	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAAGATTTTCT	NA	False	NA	NA	False	NA	NA	NA	118859874	118848259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
ENSMUST00000036470.14-0	chr2	-	1472	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	16	382	0	-382	multi-exon	FALSE	canonical	3	33	junction_3	9.0921211313239	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859858	118848641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
ENSMUST00000036473.16	chr2	+	2918	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_15	17.3977423950124	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126601	32145017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUST00000036476.10	chr4	-	3843	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTATGTGATTTGA	NA	False	NA	-3	True	AATAAA	-19	NA	141966712	141866550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ENSMUST00000036476.10-0	chr4	-	1747	8	FSM	ENSMUSG00000040606.15	ENSMUST00000036476.10	3843	8	0	2096	0	205	multi-exon	FALSE	canonical	3	169	junction_3	28.2510610239614	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGTTTGTTTTTGTTTTT	NA	False	NA	-7	True	NA	NA	NA	141966712	141868646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
ENSMUST00000036489.10	chr5	-	5550	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	8.29802041797578	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCTTTTTACCTTTGTT	NA	False	NA	-18	True	AATAAA	-18	NA	21156820	21098025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ENSMUST00000036493.8	chr3	-	3679	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_17	44.2662166204014	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGAGTCCTTGTCGTTT	NA	False	NA	-6	True	AATAAA	-24	NA	101512000	101483534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ENSMUST00000036497.16	chr12	-	3378	11	FSM	ENSMUSG00000002997.16	ENSMUST00000036497.16	3378	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	4.56508488420533	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCCAAGCATGGTTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	32111295	32008474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ENSMUST00000036509.14	chr2	-	1852	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_2	68.2632884002073	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25911759	25888554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ENSMUST00000036540.12	chr1	+	5532	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	7.88177955664784	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTCTTTCTCTGTGTG	NA	False	NA	22	True	AATAAA	-15	NA	59952164	60024505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ENSMUST00000036541.8	chr2	-	5239	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_4	32.5059994462561	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTTGGGGGTTTTTG	4755	False	NA	-3	True	AATAAA	-22	NA	52314913	52287962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ENSMUST00000036554.14	chr14	-	5715	31	FSM	ENSMUSG00000032849.15	ENSMUST00000036554.14	5715	31	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_24	29.291276668812	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118943617	118720103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118943447
ENSMUST00000036555.8	chr9	+	6727	41	FSM	ENSMUSG00000033590.9	ENSMUST00000036555.8	6727	41	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_20	11.0181384543851	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	5128	False	NA	8	True	AATAAA	-18	NA	75139301	75212733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ENSMUST00000036561.8	chr9	+	3845	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_17	23.7904950415284	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGTGCTGGACATGT	NA	False	NA	29	True	AATAAA	-17	NA	119723943	119755652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUST00000036570.5	chr14	-	7642	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGTATGAAATATTT	NA	False	NA	-12	True	AATAAA	-20	NA	26693189	26640944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ENSMUST00000036570.5-1	chr14	-	3062	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	727	3853	0	-3853	multi-exon	FALSE	canonical	3	262	junction_6	31.5683759207952	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATCTTTTGAATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	26692462	26644797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ENSMUST00000036572.4	chr4	-	1875	3	FSM	ENSMUSG00000040616.4	ENSMUST00000036572.4	1875	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	4	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGACCTCATTCAGTCA	9800	False	NA	-6	True	AATAAA	-18	NA	141811615	141758302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141759406_141764715_141765245_141811372
ENSMUST00000036576.10	chr10	+	2455	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	10.0598210719674	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGAGTCCCTTCTTT	943	False	NA	NA	False	AATAAA	-24	NA	58333769	58412066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ENSMUST00000036578.7	chr2	+	4594	7	FSM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	7.79779171019306	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATTTTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-32	NA	118731933	118755009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
ENSMUST00000036584.13	chr19	-	3137	7	FSM	ENSMUSG00000033610.17	ENSMUST00000036584.13	7414	7	323	3954	323	0	multi-exon	FALSE	canonical	3	103	junction_2	13.7204227340122	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	-12	True	AATAAA	-18	NA	34856532	34788293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855923
ENSMUST00000036606.14	chrX	+	4963	14	FSM	ENSMUSG00000031216.14	ENSMUST00000036606.14	4963	14	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	6.60016137511158	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTCTGGAGAGTTTG	NA	False	NA	3	True	AATAAA	-18	NA	98086186	98118334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_98086401_98104333_98104406_98106970_98107053_98107999_98108064_98109163_98110570_98111194_98111369_98112179_98112340_98112793_98112993_98113352_98113564_98113827_98113943_98114879_98115105_98116039_98116258_98116359_98116537_98116688
ENSMUST00000036615.7	chr9	-	2709	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	24.7620677650313	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTGTGCTTAAACATCA	NA	False	NA	-1	True	ATTAAA	-23	NA	64928975	64894264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ENSMUST00000036646.14	chr5	-	3314	12	FSM	ENSMUSG00000034724.19	ENSMUST00000036646.14	3314	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	14.1035134242887	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTGATGAAATTTAAAAAG	NA	False	NA	NA	False	AATAAA	-17	NA	96309614	96223447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279101_96281869_96281992_96309550
ENSMUST00000036647.13	chr2	+	5053	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_9	41.0940655353327	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGGTTTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	121786481	121844123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUST00000036649.8	chr11	+	2607	7	FSM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	22.1616535684702	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	NA	False	NA	15	True	AATAAA	-17	NA	88864760	88882439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ENSMUST00000036665.10	chr3	-	2916	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	19	247	0	0	multi-exon	TRUE	canonical	3	106	junction_7	14.5610676585896	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTAGTATTTTTATA	NA	False	NA	-1	True	ATTAAA	-18	NA	52924639	52889542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ENSMUST00000036680.8	chr4	-	1124	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	10.8730042868667	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCTGTCACTCGGTT	NA	False	NA	-3	True	AATAAA	-16	NA	152073454	152067095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
ENSMUST00000036682.9	chr14	-	2812	18	FSM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_2	18.5091392369855	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTAGCTTTGCTAGGTA	NA	False	NA	0	True	AATAAA	-17	NA	14371562	14304655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ENSMUST00000036690.7	chr11	+	3194	4	FSM	ENSMUSG00000039198.9	ENSMUST00000036690.7	3194	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAATTAAGAAAAGTGTT	2484	False	NA	NA	False	ATTAAA	-41	NA	121721072	121734249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_121722086_121722870_121722993_121727206_121727353_121732336
ENSMUST00000036691.14	chr2	+	8612	30	FSM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_19	84.1956133534682	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6650	False	NA	24	True	AATAAA	-40	NA	32041093	32124549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ENSMUST00000036712.6	chr6	+	1479	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGGTCTGGCATCCTG	NA	False	NA	NA	False	NA	NA	NA	128621875	128623354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_128621900_128623400
ENSMUST00000036719.12	chr2	-	6533	40	FSM	ENSMUSG00000039621.14	ENSMUST00000036719.12	6533	40	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_37	7.40390997863488	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTGTGGCCTGCTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	166555752	166408261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
ENSMUST00000036720.9	chr17	+	1270	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTGTGGTCTGTGTTGTG	7359	False	NA	4	True	ATTAAA	-17	NA	34863737	34865298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34863928_34864218
ENSMUST00000036734.6-1	chr8	+	1734	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	760	0	760	0	multi-exon	FALSE	canonical	3	736	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATATATACTTTCTC	3434	False	NA	NA	False	NA	NA	NA	85558910	85562111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85559270_85560736
ENSMUST00000036744.8	chr19	+	1783	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	20.1163283594862	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTAACTGAGTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	4806598	4815968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
ENSMUST00000036759.11	chr6	+	4307	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	0	0	0	0	multi-exon	TRUE	canonical	3	196	junction_27	51.0355975983648	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116184998	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ENSMUST00000036805.7	chr10	-	1260	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634460	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUST00000036805.7-0	chr10	-	828	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	432	0	0	0	multi-exon	FALSE	canonical	3	943	junction_2	140.821021158064	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634028	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUST00000036807.13	chr8	+	2295	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	13	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGCCCTGCTTTTTT	NA	False	NA	7	True	ATTAAA	-18	NA	26648168	26654179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26648550_26650802_26650999_26652461
ENSMUST00000036807.13-0	chr8	+	988	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	92	1215	0	161	multi-exon	FALSE	canonical	3	177	junction_1	13	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTAATTTTTTTGTT	NA	False	NA	21	True	AATAAA	-16	NA	26648260	26652964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26648550_26650802_26650999_26652461
ENSMUST00000036811.13	chr2	-	5126	19	FSM	ENSMUSG00000034101.15	ENSMUST00000036811.13	5126	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	78.9112057635779	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84479824	84431126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84479773
ENSMUST00000036825.14	chr13	-	1351	6	FSM	ENSMUSG00000034891.14	ENSMUST00000036825.14	1351	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.7636687156114	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	-1	True	AATAAA	-16	NA	54914408	54906672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54914117
ENSMUST00000036852.9	chr15	-	3896	22	FSM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_12	16.3579572820053	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTCTGGTAACATAG	NA	False	NA	-5	True	AATAAA	-19	NA	76594733	76587752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ENSMUST00000036854.4	chr4	-	2381	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	32.1696889771861	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGCCGAAGGAGCACTG	3876	False	NA	-13	True	NA	NA	NA	141602231	141585452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ENSMUST00000036862.5	chr12	+	2997	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	24.2086317506725	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGTTTCTTCCTTCCA	NA	False	NA	12	True	AATAAA	-19	NA	31704867	31987629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
ENSMUST00000036865.13	chr7	+	4645	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_14	37.7798783892034	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042059	79100012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ENSMUST00000036872.16	chr5	+	5171	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_9	31.2155926283724	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAGGGGACTGTCCTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	142615296	142656343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ENSMUST00000036877.10	chr6	-	4468	19	FSM	ENSMUSG00000038456.10	ENSMUST00000036877.10	4468	19	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_17	14.1962653756995	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCCTAGTGAGTGTAT	NA	False	NA	-7	True	AATAAA	-21	NA	39534801	39439311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39534508
ENSMUST00000036880.8	chr8	+	1642	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_10	22.2279853638006	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2125	False	NA	10	True	GATAAA	-11	NA	123951580	123958989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUST00000036884.3	chr19	+	4486	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	0	939	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCATTACGTTCTTCCA	NA	False	NA	NA	False	AATAAA	-29	NA	23118589	23145498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_23119624_23142046
ENSMUST00000036904.7	chr15	+	4348	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGGGGTATTGTGACAC	NA	False	NA	NA	False	AATAAA	-25	NA	58761077	58774239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_58761344_58770157
ENSMUST00000036928.12	chr1	-	1741	9	FSM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	19.7214984217731	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGGGCCAGATACCTT	5728	False	NA	-3	True	GATAAA	-18	NA	180845134	180817118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
ENSMUST00000036951.13	chr5	-	1240	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1275.14783456664	1981	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGCGGGTATTTCCTT	NA	False	NA	-17	True	AATAAA	-15	NA	117425690	117420718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
ENSMUST00000036952.5	chr11	+	2467	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	2	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCTGCTTCTGTTAGT	4558	False	NA	NA	False	AATAAA	-11	NA	52287254	52299550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_52287431_52293872_52294385_52297771
ENSMUST00000036954.9	chr1	-	2135	2	FSM	ENSMUSG00000034486.9	ENSMUST00000036954.9	2135	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGCTTAATCCTTGGGG	NA	False	NA	NA	False	AATAAA	-20	NA	89858901	89855677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_89856866_89857954
ENSMUST00000036972.14	chr14	-	2752	8	FSM	ENSMUSG00000036242.16	ENSMUST00000036972.14	8831	8	12	6067	0	-351	multi-exon	FALSE	canonical	3	15	junction_3	7.71693076346829	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTTTCTTGGTTTGGA	NA	False	NA	0	True	AATAAA	-19	NA	50020828	49919475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_49919874_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ENSMUST00000036977.9	chr7	+	1595	11	FSM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	26.942345851837	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTTTTCATTGTGCAC	NA	False	NA	NA	False	NA	NA	NA	139717476	139730699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUST00000036977.9-0	chr7	+	1339	11	FSM	ENSMUSG00000039018.16	ENSMUST00000036977.9	1595	11	85	171	0	168	multi-exon	FALSE	canonical	3	445	junction_3	26.942345851837	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTGGCTTCTCTTA	NA	False	NA	30	True	AATAAA	-31	NA	139717561	139730528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUST00000036987.12	chr15	+	3223	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	0	0	0	0	multi-exon	TRUE	canonical	1	145	junction_1	244.22211859964	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239921	89257029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000036991.5	chr5	-	1816	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	24.5	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	False	NA	0	True	AATAAA	-20	NA	116560923	116546549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_116547550_116553465_116553530_116560171
ENSMUST00000036996.6	chr8	+	623	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTGTGCTACTTCAA	NA	False	NA	23	True	AATAAA	-23	NA	84293299	84298255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84293560_84297458_84297628_84298061
ENSMUST00000036996.6-0	chr8	+	536	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	87	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_2	87.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCTGTGCTACTTCAA	NA	False	NA	23	True	AATAAA	-23	NA	84293386	84298255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84293560_84297458_84297628_84298061
ENSMUST00000037001.10	chr15	+	2502	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.1761116600664	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	2335	False	NA	27	True	AGTAAA	-16	NA	100366903	100377045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUST00000037007.4	chr11	-	6384	22	FSM	ENSMUSG00000034282.4	ENSMUST00000037007.4	6384	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.11355628773068	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTCCTCTCATTTG	9964	False	NA	NA	False	AATAAA	-15	NA	116128903	116111384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120400_116120570_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650_116123813_116123929_116123969_116124211_116124338_116124980_116125108_116125194_116125350_116125757_116125858_116128725
ENSMUST00000037014.11	chr12	+	1960	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3.74165738677394	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGTTGACTCATT	3901	False	NA	17	True	ATTAAA	-19	NA	112772556	112779872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
ENSMUST00000037023.9	chr12	-	390	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	25458	junction_2	210	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGTGTGTTTTGT	NA	False	NA	-10	True	AATAAA	-18	NA	69205960	69204495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69204596_69205434_69205535_69205770
ENSMUST00000037025.16	chr13	+	4987	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	9.84682690007294	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGTTTTTGAAGCTGTG	1161	False	NA	NA	False	TATAAA	-20	NA	47196974	47238755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ENSMUST00000037029.7	chr18	+	6782	4	FSM	ENSMUSG00000033960.7	ENSMUST00000037029.7	6782	4	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	13.6950923894494	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGGTATTGTGTCTT	NA	False	NA	14	True	AATAAA	-19	NA	4634877	4682869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_4635032_4649074_4649406_4672514_4676168_4680225
ENSMUST00000037035.12	chr4	-	2692	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_4	17.1373860317144	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTGGTAATTAGCGTA	NA	False	NA	0	True	AATAAA	-27	NA	16163647	16122732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ENSMUST00000037035.12-0	chr4	-	2050	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	0	642	0	-634	multi-exon	FALSE	canonical	3	70	junction_4	17.1373860317144	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTAGTTCAGTTTTT	NA	False	NA	-9	True	AGTAAA	-13	NA	16163647	16123374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ENSMUST00000037044.13	chr10	+	3785	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_19	16.6879511224538	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTCTTAAGTTTGTT	1778	False	NA	82	True	ATTAAA	-13	NA	45453924	45588441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUST00000037055.14	chr4	+	3956	29	FSM	ENSMUSG00000036622.16	ENSMUST00000037055.14	3956	29	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_19	18.6368011510253	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1402	False	NA	12	True	AATAAA	-17	NA	140714183	140734641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ENSMUST00000037057.14	chr17	-	4103	6	FSM	ENSMUSG00000002617.15	ENSMUST00000037057.14	4103	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	2.41660919471891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTAAGTCCTTCC	NA	False	NA	NA	False	AATAAA	-42	NA	23412226	23392842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23396339_23397248_23397376_23401121_23401207_23410318_23410410_23410650_23410777_23412048
ENSMUST00000037097.9	chr18	+	5409	27	FSM	ENSMUSG00000034295.11	ENSMUST00000037097.9	5409	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	16.7332005306815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	24842501	25266558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25153718_25153815_25155678_25156036_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ENSMUST00000037099.9	chr4	-	4119	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	0	0	0	0	multi-exon	FALSE	canonical	3	1299	junction_1	75.0269284990396	2897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000125	134941279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ENSMUST00000037115.9	chr15	+	1007	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_2	11.2644968324772	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCAGTTTTACTTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	52575837	52593960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
ENSMUST00000037117.6	chr2	-	6941	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	18.8215302247187	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGATTTTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	28730298	28712316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
ENSMUST00000037127.15	chr4	+	1719	9	FSM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	182.065535934179	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407561	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ENSMUST00000037141.9	chr3	-	7411	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGTCAGTTTTGTTT	NA	False	NA	0	True	ATTAAA	-15	NA	51468300	51422739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ENSMUST00000037141.9-0	chr3	-	1791	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	220	5400	220	-5400	multi-exon	FALSE	canonical	3	18	junction_2	3.23879544250132	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCCCAGTGTTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	51468080	51428139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ENSMUST00000037182.14	chr8	-	5044	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	0	7792	0	2439	multi-exon	FALSE	canonical	3	25	junction_6	10.5632744184703	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATCCGTCTATACTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	26609252	26519240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ENSMUST00000037190.15	chr8	+	1191	8	FSM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_4	79.3373062516324	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343484	61360614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUST00000037198.10	chr4	-	2658	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTGCCCTTTCCCATT	0	True	NA	NA	False	ATTAAA	-18	NA	16013888	15997120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
ENSMUST00000037198.10-0	chr4	-	1798	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	67	793	0	-687	multi-exon	FALSE	canonical	3	76	junction_2	19.0305018325844	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCAGTGTATTGGCTTG	-1	True	NA	-4	True	ATTAAA	-17	NA	16013821	15997913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
ENSMUST00000037205.11	chr7	+	828	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	55.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTGTTATTTGAATTT	NA	False	NA	25	True	ATTAAA	-26	NA	64042392	64061873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_64042592_64049916_64050255_64061582
ENSMUST00000037210.9	chr2	+	1321	10	FSM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_6	11.0565326201412	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTATTGTGTCCAGTCT	NA	False	NA	NA	False	NA	NA	NA	71283619	71355535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ENSMUST00000037218.2	chr11	+	1110	3	FSM	ENSMUSG00000034209.5	ENSMUST00000037218.2	1110	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAAGGGTTTCTTGTTC	NA	False	NA	NA	False	AATAAA	-27	NA	5008127	5010385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5008525_5009432_5009558_5009797
ENSMUST00000037232.8	chr13	+	8395	12	FSM	ENSMUSG00000039087.18	ENSMUST00000037232.8	8395	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	23.6520926685844	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACGGCACACGACCAA	NA	False	NA	-5	True	AATAAA	-11	NA	38072846	38135970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38125518_38125681_38130832_38131640_38132618
ENSMUST00000037246.7	chr19	-	1067	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_5	30.737864703499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889360	4875393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
ENSMUST00000037248.10	chr7	+	2766	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTCTCAGGCTCAGT	1476	False	NA	8	True	NA	NA	NA	126461143	126464549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ENSMUST00000037248.10-0	chr7	+	2062	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	467	237	0	222	multi-exon	FALSE	canonical	3	171	junction_2	39.0498257216199	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCATGCCCTGTCTGTCC	1943	False	NA	64	True	AATAAA	-38	NA	126461610	126464312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ENSMUST00000037260.8	chr15	+	2486	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGTGTAATTGGCATA	NA	False	NA	10	True	AATAAA	-16	NA	75812800	75821249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75813009_75818971
ENSMUST00000037270.5	chr15	+	5560	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_5	31.8077875639983	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTGGAGAGTGTCTAA	NA	False	NA	16	True	AATAAA	-16	NA	58287316	58329589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ENSMUST00000037280.5	chr2	+	4054	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCCCTCTTCCTAAATC	6377	False	NA	NA	False	TATAAA	-13	NA	119119222	119128934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
ENSMUST00000037280.5-0	chr2	+	3927	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	0	127	0	0	multi-exon	FALSE	canonical	3	64	junction_3	7.17635004720366	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAATAAAAATAAAAA	6377	False	NA	NA	False	NA	NA	NA	119119222	119128807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
ENSMUST00000037285.10	chr11	+	3512	20	FSM	ENSMUSG00000011877.14	ENSMUST00000037285.10	3512	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	121.3660245347	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAGGTGGGGCTTAGC	NA	False	NA	30	True	AATAAA	-33	NA	77384387	77398612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393654_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ENSMUST00000037287.8	chr7	-	1901	4	FSM	ENSMUSG00000037664.14	ENSMUST00000037287.8	1901	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4.02768199119819	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTTGTAGTCTTCTTG	NA	False	NA	NA	False	AATAAA	-16	NA	143014787	143012078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143012759_143012848_143012988_143013531_143014416_143014589
ENSMUST00000037290.12	chr10	-	2939	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	0	0	0	0	multi-exon	FALSE	canonical	3	1393	junction_15	206.401332360041	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCCTGGTCTACCCT	NA	False	NA	-6	True	AATAAA	-27	NA	127147655	127132089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUST00000037299.15	chr2	-	3184	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_4	33.5885024971343	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562742	180546169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
ENSMUST00000037302.6	chr19	+	4209	13	FSM	ENSMUSG00000048720.9	ENSMUST00000037302.6	4209	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	4.85555237731907	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATCCATCCATCAATCT	NA	False	NA	NA	False	NA	NA	NA	38825022	38908367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38825891_38854059_38854184_38871102_38871219_38884430_38884514_38887312_38887431_38889752_38889860_38896215_38896297_38899450_38899540_38901634_38901707_38902372_38902502_38902747_38902858_38905055_38905315_38906314
ENSMUST00000037315.13	chr7	+	6877	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGTATGTGCTCTGTG	2722	False	NA	22	True	ATTAAA	-17	NA	78922946	79015256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ENSMUST00000037315.13-0	chr7	+	1718	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	55	5104	0	-5104	multi-exon	FALSE	canonical	3	33	junction_5	6.39140047250992	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGTATCTGATTGCTT	2777	False	NA	NA	False	NA	NA	NA	78923001	79010152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ENSMUST00000037324.12	chr11	+	1440	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	4483	junction_4	346.23483360286	1703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGTTTCTTAATGAA	411	False	NA	34	True	AATAAA	-41	NA	52122835	52137685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUST00000037333.17	chr17	+	1999	7	FSM	ENSMUSG00000034165.17	ENSMUST00000037333.17	1999	7	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	1813.81013951908	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTTGTGATCCCTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	47816052	47910616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47816192_47889633_47889699_47904578_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000037337.10	chr5	+	1788	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	52	433	0	-206	multi-exon	FALSE	canonical	3	62	junction_3	8.96994983263563	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTAAGAAGTTTTCACT	NA	False	NA	8	True	AATAAA	-22	NA	53967020	54060874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUST00000037349.8	chrX	-	2237	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	0	0	0	0	multi-exon	FALSE	canonical	3	1039	junction_9	82.1482129378898	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602440	47563820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUST00000037353.10	chrX	-	4752	8	FSM	ENSMUSG00000034457.11	ENSMUST00000037353.10	4752	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	34.3130843134516	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTGTTTATTCCTC	NA	False	NA	-23	True	AATAAA	-14	NA	96420822	96377445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ENSMUST00000037356.8	chr4	+	3260	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	39.6316371938716	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143139556	143147661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
ENSMUST00000037360.8	chr2	-	1703	3	FSM	ENSMUSG00000034226.8	ENSMUST00000037360.8	1703	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTGGTCTCCT	NA	False	NA	-5	True	AATAAA	-17	NA	119101753	119099681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119100969_119101162_119101222_119101396
ENSMUST00000037361.9	chr1	+	1620	4	FSM	ENSMUSG00000038793.9	ENSMUST00000037361.9	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	33.0790299468141	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180762586	180765965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180762925_180764111_180764359_180764573_180764820_180765176
ENSMUST00000037370.14	chr5	-	5707	27	FSM	ENSMUSG00000029093.15	ENSMUST00000037370.14	5707	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_26	3.95836317854419	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACAGGGTCGGTCTCTGC	NA	False	NA	NA	False	NA	NA	NA	36555468	36174523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36554909
ENSMUST00000037372.8	chr13	-	3527	10	FSM	ENSMUSG00000032999.11	ENSMUST00000037372.8	3527	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	7.43531778858738	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGACTTCTAATCTCAAA	NA	False	NA	-7	True	ATTAAA	-24	NA	65353530	65324924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433
ENSMUST00000037376.14	chr6	+	1405	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	21.8281729836116	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9258	False	NA	13	True	AATAAA	-21	NA	83771963	83779538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUST00000037383.13	chr12	+	2737	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	76.8839312788367	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258106	8335759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUST00000037391.12	chrX	-	3600	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	6.51683479938452	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGATGTGATCTGTCT	NA	False	NA	1	True	NA	NA	NA	70536455	70463665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
ENSMUST00000037397.8	chr9	-	3819	11	FSM	ENSMUSG00000040729.9	ENSMUST00000037397.8	3819	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.74299345444258	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGATCTCTGCTTTTTAT	159	False	NA	NA	False	AATAAA	-20	NA	8134295	8076461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_8076948_8079495_8079561_8087228_8087427_8092244_8092318_8095214_8095328_8099732_8101843_8103318_8103518_8112080_8112193_8120642_8120789_8130196_8130317_8134098
ENSMUST00000037399.16	chr7	+	1028	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	0	0	0	0	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTGATTGATTGATTG	NA	False	NA	NA	False	TTTAAA	-18	NA	27147402	27165569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
ENSMUST00000037399.16-0	chr7	+	814	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	54	160	0	0	multi-exon	FALSE	canonical	2	274	junction_1	67.0834368529222	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTCCTCTCTCTGTCT	NA	False	NA	46	True	AATAAA	-43	NA	27147456	27165409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
ENSMUST00000037401.10	chr2	+	5737	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	27.9815806939402	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038561	156151872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ENSMUST00000037409.13	chr3	+	2303	6	FSM	ENSMUSG00000033233.18	ENSMUST00000037409.13	4612	6	0	2309	0	0	multi-exon	FALSE	canonical	2	8	junction_3	2.33238075793812	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGACTTCAAGTGCT	4331	False	NA	7	True	ATTAAA	-18	NA	100829790	100839018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_100830716_100832256_100832991_100834540_100834671_100835370_100835486_100837132_100837260_100838746
ENSMUST00000037418.7	chr12	-	7409	6	FSM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.87442304278158	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAGTTCTTTCTTAAT	7745	False	NA	4	True	AATAAA	-23	NA	87247228	87213010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
ENSMUST00000037422.16	chr13	-	3734	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_7	120.344339293546	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54841660	54827222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ENSMUST00000037423.4	chr2	-	1539	4	FSM	ENSMUSG00000037279.14	ENSMUST00000037423.4	1539	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.64279609239471	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTTTTTAAAATTTT	NA	False	NA	-12	True	AATAAA	-19	NA	144174066	144147094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_144147840_144159630_144159821_144172823_144173042_144173680
ENSMUST00000037448.7	chr7	-	1935	3	FSM	ENSMUSG00000074283.6	ENSMUST00000037448.7	1935	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTCTGCTGTCGGGTG	NA	False	NA	NA	False	NA	NA	NA	23936057	23927472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_23929266_23933775_23933903_23936042
ENSMUST00000037472.13	chr7	+	5105	15	FSM	ENSMUSG00000035545.14	ENSMUST00000037472.13	5105	15	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_8	58.4889663412978	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	92	False	NA	20	True	ATTAAA	-20	NA	4140047	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ENSMUST00000037473.6	chr14	+	6321	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_2	12.7487494384703	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAATTTGTGACATAA	NA	False	NA	NA	False	NA	NA	NA	49303951	49328336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ENSMUST00000037473.6-0	chr14	+	3085	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	47	3189	0	271	multi-exon	FALSE	canonical	3	109	junction_2	12.7487494384703	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGTCTTTTTTTTC	NA	False	NA	33	True	ATTAAA	-18	NA	49303998	49325147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ENSMUST00000037484.15	chr9	+	5111	23	FSM	ENSMUSG00000034252.15	ENSMUST00000037484.15	5111	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	105.987768279143	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGCTGCATGTGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	79974184	80052235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUST00000037489.15	chr17	+	2190	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	5.07991688470939	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGATATCCATATCTT	NA	False	NA	44	True	AATAAA	-44	NA	34824834	34832423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUST00000037499.6	chr2	+	955	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGACTATCTCATATTTG	NA	False	NA	NA	False	TATAAA	-22	NA	105734982	105795903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ENSMUST00000037499.6-0	chr2	+	815	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	0	140	0	-140	multi-exon	FALSE	canonical	3	400	junction_1	38.970073988468	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTTATGTTTTAAAT	NA	False	NA	14	True	AATAAA	-15	NA	105734982	105795763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ENSMUST00000037502.7	chr11	+	2317	8	FSM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	7.85324578679129	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTTCTGAATACC	NA	False	NA	13	True	AATAAA	-15	NA	95227843	95272698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
ENSMUST00000037504.7	chr9	+	2837	13	FSM	ENSMUSG00000034263.14	ENSMUST00000037504.7	2837	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	58.8451357377991	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACTCCTAAGAAGCAAT	NA	False	NA	NA	False	AATATA	-18	NA	64868218	64893990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64868540_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUST00000037528.10	chr7	+	3719	18	FSM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	0	892	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.03839331062234	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGTCTCTGAATTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	99030620	99110192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ENSMUST00000037534.8	chr11	+	1833	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_5	18.8244355825082	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUST00000037539.15	chr16	+	1698	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	254	190	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.62530786869986	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCTGTACATTAATAA	NA	False	NA	NA	False	AATAAA	-28	NA	90628000	90701583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
ENSMUST00000037540.5	chr7	-	3011	3	FSM	ENSMUSG00000032860.6	ENSMUST00000037540.5	3011	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCATTTTGTTG	3103	False	NA	NA	False	ATTAAA	-19	NA	100661205	100645774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100648308_100652770_100652962_100660918
ENSMUST00000037548.11	chr10	-	1988	4	FSM	ENSMUSG00000038876.13	ENSMUST00000161508.3	945	4	0	-1043	0	0	multi-exon	FALSE	canonical	3	17	junction_3	93.3821301011185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	29238022	29222171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
ENSMUST00000037551.15	chr15	+	2692	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	16.1864140562386	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555814	76579119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ENSMUST00000037557.9	chr10	-	5511	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_22	19.412065393159	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAGAAATGATATT	NA	False	NA	-35	True	NA	NA	NA	122911930	122831253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ENSMUST00000037565.14	chr4	-	2558	5	FSM	ENSMUSG00000066000.13	ENSMUST00000037565.14	2558	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726965	147696395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
ENSMUST00000037575.15	chr11	-	4246	24	FSM	ENSMUSG00000018501.18	ENSMUST00000037575.15	4246	24	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_18	98.3977884086076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	62250617	62208622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218073_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229895_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62250586
ENSMUST00000037585.9	chr14	+	4051	20	FSM	ENSMUSG00000040818.11	ENSMUST00000037585.9	6638	20	0	2587	0	1152	multi-exon	TRUE	canonical	3	24	junction_11	139.009495679959	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGCTTGTGTTATGTGTC	NA	False	NA	24	True	ATTAAA	-24	NA	26300732	26352890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_26301018_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
ENSMUST00000037607.11	chr4	+	5773	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACAGTTTACTGAGTTT	-24	True	NA	22	True	NA	NA	NA	31964096	32023467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ENSMUST00000037607.11-0	chr4	+	3089	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	23	2661	0	1246	multi-exon	FALSE	canonical	3	147	junction_6	19.7680890262564	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	-1	True	NA	NA	False	AATAAA	-20	NA	31964119	32020806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ENSMUST00000037609.8	chr8	-	2694	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_10	15.0390495171943	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGTTACAGCTCTGTCT	NA	False	NA	NA	False	AATATA	-20	NA	26466781	26434480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
ENSMUST00000037615.7	chr13	-	5647	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGTGGCTGTGTTGGT	NA	False	NA	1	True	AATAAA	-31	NA	25121644	25091561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
ENSMUST00000037615.7-0	chr13	-	1707	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	0	3940	0	-3940	multi-exon	FALSE	canonical	3	44	junction_1	4.49965705140369	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACATTCCATCCATTTTT	NA	False	NA	-5	True	AATAAA	-17	NA	25121644	25095501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
ENSMUST00000037618.13	chr5	+	5459	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATGTCTTCTGTGGGA	NA	False	NA	16	True	AATAAA	-22	NA	53747555	53814704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000037618.13-1	chr5	+	4080	11	FSM	ENSMUSG00000039191.13	ENSMUST00000037618.13	5459	11	154	1225	0	0	multi-exon	FALSE	canonical	3	36	junction_1	139.803576492163	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAATCAATTTCAATA	NA	False	NA	6	True	ATTAAA	-17	NA	53747709	53813479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53747829_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000037620.14	chr5	-	1456	6	FSM	ENSMUSG00000037221.14	ENSMUST00000037620.14	1456	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	88.3841614770429	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAACGTAGGATGCTTA	9632	False	NA	-10	True	ATTAAA	-21	NA	137599306	137594906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532_137598806_137599003
ENSMUST00000037633.16	chr16	-	3825	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	24.8770530528646	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	False	NA	1	True	AATAAA	-28	NA	10994257	10954455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ENSMUST00000037636.4	chr19	+	3240	3	FSM	ENSMUSG00000034336.4	ENSMUST00000037636.4	3240	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	0.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGACTCGTGCTCTGTGGT	NA	False	NA	12	True	ATTAAA	-15	NA	47003136	47013766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_47004259_47010271_47010397_47011773
ENSMUST00000037646.9	chr10	-	3877	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_11	19.4396714593195	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752790	85727833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ENSMUST00000037649.6	chr1	+	4243	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	17.6995509005001	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGGACTTGTGGCTTT	3029	False	NA	18	True	AATAAA	-15	NA	127796509	127871605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUST00000037666.6	chr8	+	6408	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGTAGCTCCAGCATT	NA	False	NA	NA	False	NA	NA	NA	36054951	36146603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_36058513_36131821_36131949_36143883
ENSMUST00000037678.7	chr19	-	2253	17	FSM	ENSMUSG00000034371.10	ENSMUST00000037678.7	2253	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	8.36286434183886	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGACTTTGTCCCTGTTT	NA	False	NA	-26	True	AATAAA	-14	NA	10581622	10569563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531
ENSMUST00000037709.16	chr6	-	3241	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_8	114.912830779186	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATGTCCTCCTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	146536095	146503849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ENSMUST00000037718.10	chr18	+	1437	10	FSM	ENSMUSG00000034391.13	ENSMUST00000037718.10	1437	10	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAGTTAGCAGTAGGG	1176	False	NA	-12	True	NA	NA	NA	84953282	84999501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ENSMUST00000037726.14	chr14	-	3416	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	0	0	0	0	multi-exon	TRUE	canonical	3	136	junction_13	13.8696352514015	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGGTTTCTTTTTAG	NA	False	NA	4	True	AGTAAA	-26	NA	123220695	123156382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ENSMUST00000037728.13	chr7	+	3615	10	FSM	ENSMUSG00000034690.14	ENSMUST00000037728.13	3615	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.84067131350933	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGATGACTTCTAATTTC	2977	False	NA	21	True	AATAAA	-17	NA	6048159	6108149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6048221_6063527_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
ENSMUST00000037739.8	chr14	-	1947	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_10	82.9678140200482	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741109	30734389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ENSMUST00000037746.8	chr11	-	1533	3	FSM	ENSMUSG00000040610.8	ENSMUST00000037746.8	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCCGCTTTTATTTCG	9490	False	NA	NA	False	AATAAA	-17	NA	33153589	33150751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_33151490_33152428_33152673_33153038
ENSMUST00000037748.9	chr1	-	7640	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	0	0	0	0	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATGTATTGTAGTACC	NA	False	NA	NA	False	ATTAAA	-14	NA	178165362	178151907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ENSMUST00000037748.9-1	chr1	-	3684	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	0	3956	0	-3467	multi-exon	FALSE	canonical	2	3444	junction_4	860.763298254115	2624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTTGGGATTCTCGC	NA	False	NA	-21	True	AATAAA	-15	NA	178165362	178155863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ENSMUST00000037763.11	chr18	+	7215	30	FSM	ENSMUSG00000034653.12	ENSMUST00000037763.11	7215	30	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	9.69634080312122	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGAAGTTATTCAGATCT	NA	False	NA	30	True	AATAAA	-32	NA	44960812	45022784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ENSMUST00000037776.16	chr17	+	2594	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGTGTCTAGAAGGT	NA	False	NA	15	True	AATAAA	-17	NA	29251605	29261871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ENSMUST00000037776.16-0	chr17	+	1766	7	FSM	ENSMUSG00000071172.14	ENSMUST00000037776.16	2594	7	41	787	0	0	multi-exon	FALSE	canonical	3	61	junction_4	890.897051042125	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGCCTGTTTTTCCTTG	NA	False	NA	37	True	ATTAAA	-28	NA	29251646	29261084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29258427_29258884_29259748_29259788_29260180_29260268_29260357
ENSMUST00000037783.7	chr6	+	1752	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	17.7876361554873	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGGAACTTGTTTCTT	NA	False	NA	12	True	TATAAA	-16	NA	91855033	91876824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
ENSMUST00000037788.6	chr12	-	5064	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_16	10.2834819006016	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTTGTGCTTGATT	5649	False	NA	NA	False	AATAAA	-22	NA	87194676	87153634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ENSMUST00000037796.14	chr1	+	1539	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	48.5514475124641	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	False	NA	13	True	AATAAA	-17	NA	75412573	75419818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUST00000037807.3	chr6	+	1242	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTGTCCCTGTTCT	NA	False	NA	21	True	AATAAA	-32	NA	83688245	83715295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83688526_83710080_83710269_83714521
ENSMUST00000037813.5	chr10	+	2456	4	FSM	ENSMUSG00000040009.7	ENSMUST00000037813.5	3519	4	32	1031	0	-1022	multi-exon	TRUE	canonical	3	7	junction_1	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-17	NA	74803040	74851708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_74803215_74814622_74814689_74826765_74827973_74850699
ENSMUST00000037824.6	chr15	-	1365	3	FSM	ENSMUSG00000033837.6	ENSMUST00000037824.6	1365	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	19.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGACAGCTTTAAAACACCAG	NA	False	NA	NA	False	NA	NA	NA	76554148	76552424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76553341_76553428_76553534_76553804
ENSMUST00000037827.10	chr4	-	2563	9	FSM	ENSMUSG00000039838.12	ENSMUST00000037827.10	3387	9	0	824	0	651	multi-exon	FALSE	canonical	0	0	junction_5	1.31695671910659	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGGGTTCGAGGTCATC	NA	False	NA	NA	False	AATAAA	-18	NA	150736631	150713852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_150714255_150715374_150715581_150717769_150717947_150719343_150719498_150722430_150723168_150726902_150727128_150727745_150727839_150728404_150728826_150736483
ENSMUST00000037828.8	chr4	-	2681	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	0	3868	0	1154	multi-exon	TRUE	canonical	3	50	junction_1	8.8175960442742	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGCATCACTTGGAGTA	NA	False	NA	-11	True	AATAAA	-16	NA	134495335	134472732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ENSMUST00000037839.12	chr3	-	1610	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	173.164190104923	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGCATTTGATCTATAA	NA	False	NA	-1	True	AATAAA	-45	NA	10416377	10405012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ENSMUST00000037843.7	chr16	-	1851	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	8.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTAGTCTTGCCTCAT	NA	False	NA	-1	True	NA	NA	NA	4698179	4692641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4693734_4694225_4694286_4697480
ENSMUST00000037850.7	chr18	+	2067	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	254.699312515598	731	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGGATCTTTTTTT	NA	False	NA	38	True	AATAAA	-18	NA	53309387	53353937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUST00000037853.5	chr9	+	3642	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	8.89622712968015	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGCCTGCATAAATAT	9272	False	NA	NA	False	NA	NA	NA	53295324	53313167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ENSMUST00000037865.13	chr5	+	5345	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_14	17.8821937464506	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTAGTTTTCTTGTGAT	NA	False	NA	10	True	AATAAA	-21	NA	124767116	124801519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUST00000037865.13-0	chr5	+	3522	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	13	1810	0	506	multi-exon	FALSE	canonical	3	142	junction_14	17.8821937464506	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCTGTTCAGGTTAGCT	NA	False	NA	26	True	AATAAA	-24	NA	124767129	124799709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUST00000037877.11	chr2	-	2225	6	FSM	ENSMUSG00000038932.14	ENSMUST00000037877.11	2225	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	24.9591666527551	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCCAGTGAGTCGCTTT	5369	False	NA	NA	False	AATAAA	-19	NA	180284501	180263748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180264508_180277046_180277189_180280196_180280441_180282093_180282257_180282673_180282858_180283768
ENSMUST00000037879.8	chr10	-	5098	4	FSM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	19.3045763140937	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTTTAGATTTTGT	NA	False	NA	-11	True	AATAAA	-22	NA	17823815	17774782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_17778126_17783781_17783937_17790739_17791781_17823256
ENSMUST00000037906.6	chr1	-	3341	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCAGCCTTAAGTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	119840938	119835619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119838885_119840862
ENSMUST00000037906.6-0	chr1	-	1521	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	0	1820	0	-1820	multi-exon	FALSE	canonical	3	113	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTCTGAATTCCAGTG	NA	False	NA	-10	True	AATAAA	-18	NA	119840938	119837439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119838885_119840862
ENSMUST00000037912.12	chr11	+	9178	15	FSM	ENSMUSG00000037926.16	ENSMUST00000037912.12	9178	15	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	4.23361186078213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCAAGTGTAACA	NA	False	NA	10	True	AATAAA	-20	NA	77107112	77351046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77107342_77218278_77218323_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ENSMUST00000037913.9	chr16	+	817	2	FSM	ENSMUSG00000037991.10	ENSMUST00000037913.9	3742	2	9	2916	0	-2916	multi-exon	TRUE	canonical	3	158	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAATTTCAGTTTGTT	NA	False	NA	8	True	NA	NA	NA	10652931	10658186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10653255_10657692
ENSMUST00000037915.9	chr11	+	4593	9	FSM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	7.97554857047464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTTGCCTCATTTTAT	330	False	NA	31	True	AATAAA	-22	NA	98686341	98698685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ENSMUST00000037918.12	chr5	+	6247	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTTTAGAAATGCTATG	NA	False	NA	NA	False	AATAAA	-18	NA	67417907	67448804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUST00000037918.12-0	chr5	+	1179	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	131	4937	0	-135	multi-exon	FALSE	canonical	3	347	junction_1	43.3504937240909	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATTCTGAAATTTG	NA	False	NA	9	True	AATACA	-13	NA	67418038	67443867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUST00000037923.5	chr13	+	3086	4	FSM	ENSMUSG00000038132.7	ENSMUST00000037923.5	3086	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTTGCATCAGTTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	46571909	46584571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_46572675_46573750_46573875_46575326_46575382_46582429
ENSMUST00000037928.9	chrX	-	1783	4	FSM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	206.108385726216	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	False	NA	-18	True	AATAAA	-15	NA	162859117	162853700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859010
ENSMUST00000037941.10	chr7	+	1533	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	0	0	0	0	multi-exon	FALSE	canonical	3	5787	junction_4	310.433666383802	5335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGACCTCTTCCTGT	NA	False	NA	42	True	AATAAA	-30	NA	142606475	142621671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUST00000037947.15	chr3	+	3418	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_2	15.5	838	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGGTGTGGTATGGG	6417	False	NA	14	True	AATAAA	-14	NA	95566098	95570487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95566799_95567071_95567320_95568017
ENSMUST00000037958.14	chr3	+	5787	23	FSM	ENSMUSG00000039831.17	ENSMUST00000037958.14	5787	23	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	3.88922010920586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACCATCTCCACTACT	NA	False	NA	NA	False	NA	NA	NA	121746877	121810402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_121747054_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
ENSMUST00000037960.11	chrX	-	2982	10	FSM	ENSMUSG00000036985.13	ENSMUST00000037960.11	2982	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	12.3107902084129	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCCTCCTCCTTCC	NA	False	NA	-2	True	ATTAAA	-16	NA	47297564	47260845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
ENSMUST00000037967.6	chrX	-	2023	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	73416955	73412822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73414618_73416219_73416289_73416796
ENSMUST00000037968.10	chr7	-	5157	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_11	14.4016722385043	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGAGAGTTAAAAGTATA	NA	False	NA	-35	True	AATAAA	-16	NA	98790348	98534227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ENSMUST00000037968.10-0	chr7	-	3428	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	0	1729	0	0	multi-exon	FALSE	canonical	3	139	junction_11	14.4016722385043	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98790348	98535956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ENSMUST00000037977.15	chr9	+	3151	9	FSM	ENSMUSG00000034563.17	ENSMUST00000037977.15	3151	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	60.1040764008565	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAGTTGCCAATTACG	NA	False	NA	7	True	AATAAA	-31	NA	72892710	72923622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920275_72922613
ENSMUST00000037983.6	chr3	+	3845	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	58	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAAAACTAGACCT	409	False	NA	10	True	AATAAA	-21	NA	95532330	95539413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95532488_95534059_95534186_95535851
ENSMUST00000037998.6	chr1	-	6492	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTCTGATAGGCTTCAC	NA	False	NA	-5	True	AATAAA	-24	NA	21149453	21066522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ENSMUST00000037998.6-1	chr1	-	5852	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	0	640	0	-640	multi-exon	FALSE	canonical	3	66	junction_1	7.25534285888682	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCATCCTCAGACCGG	NA	False	NA	NA	False	AATAAA	-26	NA	21149453	21067162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ENSMUST00000038014.11	chr4	-	5969	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_12	6.2974727681274	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTCTGGGGCACCTCT	NA	False	NA	-12	True	AATAAA	-15	NA	141518202	141487499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ENSMUST00000038014.11-0	chr4	-	3949	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	204	1816	204	-1816	multi-exon	FALSE	canonical	3	44	junction_12	6.2974727681274	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAAAGAAAACACTG	NA	False	NA	NA	False	NA	NA	NA	141517998	141489315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ENSMUST00000038027.6	chr7	-	2884	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	0	0	0	0	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTAGGGTTTTATTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	33929761	33900754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUST00000038027.6-0	chr7	-	2008	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	47	829	0	0	multi-exon	FALSE	canonical	3	1600	junction_15	166.521152162862	2568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33929714	33901583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUST00000038039.3	chr13	+	1957	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_5	64.0791611125559	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGACTTTTTTCTTCATG	NA	False	NA	21	True	AATAAA	-21	NA	25015661	25026136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUST00000038075.12	chr14	-	1076	3	FSM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGGTCCTTCTTTTG	NA	False	NA	-2	True	ATTAAA	-29	NA	123150574	123128271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_123129229_123137887_123137945_123150512
ENSMUST00000038091.8	chr1	+	3213	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_5	43.0761599444003	462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGGAGTTTTTTGTT	NA	False	NA	22	True	AATAAA	-22	NA	180678691	180695678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUST00000038096.8	chr11	+	2520	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_4	7.30479294709987	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAAGACTGGTATATTT	3857	False	NA	NA	False	AATAAA	-20	NA	121312226	121322114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
ENSMUST00000038099.6	chr16	-	1208	2	FSM	ENSMUSG00000038037.6	ENSMUST00000038099.6	2785	2	0	1577	0	-1577	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACAAAGATTCCTA	NA	False	NA	NA	False	AATAAA	-24	NA	10603400	10601683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10602786_10603294
ENSMUST00000038104.12	chr13	-	9921	39	FSM	ENSMUSG00000049658.14	ENSMUST00000038104.12	9921	39	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_24	12.2627061132051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGTCCTTTTCAAA	6759	False	NA	0	True	AATAAA	-18	NA	100240578	100154501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972_100204065_100206584_100206745_100210894_100211054_100212012_100212152_100214339_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230054_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ENSMUST00000038107.9	chr10	+	1979	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	0	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTTGGGGGGGGTTGTC	NA	False	NA	NA	False	AATAAA	-34	NA	17598965	17601422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_17599208_17599685
ENSMUST00000038108.12	chr3	-	1249	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	0	0	0	0	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGGGTGGAACCTTTA	NA	False	NA	NA	False	NA	NA	NA	51316409	51312097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ENSMUST00000038108.12-0	chr3	-	424	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	24	801	0	0	multi-exon	FALSE	canonical	3	5471	junction_1	421.328322755017	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGACGGAGTCACTGG	NA	False	NA	-32	True	AATAAA	-18	NA	51316385	51312898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ENSMUST00000038118.15	chr9	-	4876	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTCCCAGTTAGTATTG	NA	False	NA	3	True	AATAAA	-25	NA	105372332	105288556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ENSMUST00000038118.15-0	chr9	-	3846	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	0	1030	0	535	multi-exon	FALSE	canonical	3	363	junction_24	33.8350310750022	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372332	105289586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ENSMUST00000038128.15	chr19	-	2188	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_2	8.28653526310404	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGCTGACAAACTCTC	NA	False	NA	-3	True	AATAAA	-17	NA	10859365	10848023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
ENSMUST00000038131.10	chr5	-	1317	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	24.5098832106561	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGTATTTTGCTTACA	NA	False	NA	60	True	TTTAAA	-40	NA	151574707	151566220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
ENSMUST00000038149.13	chr17	+	3068	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAGTTGAGATTTTTTT	NA	False	NA	7	True	AATAAA	-20	NA	34811236	34816374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ENSMUST00000038149.13-0	chr17	+	2084	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	0	984	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.02338282435253	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTGACTCGGATATC	NA	False	NA	NA	False	AATAGA	-17	NA	34811236	34815390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ENSMUST00000038154.12	chr3	-	1232	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	9.84321537348893	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTAGTCTTTCTTGTT	NA	False	NA	0	True	AATAAA	-17	NA	51303969	51295832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
ENSMUST00000038166.9	chr17	-	4913	23	FSM	ENSMUSG00000035051.16	ENSMUST00000038166.9	4913	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	20.6034980581309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGGAGTAGACGTG	545	False	NA	-5	True	AATAAA	-15	NA	80597905	80545737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80588624_80588858_80597484
ENSMUST00000038169.8	chr10	-	544	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	12818	junction_1	2119	3058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTGCCTCAGCTTCTGCT	NA	False	NA	-10	True	AATAAA	-18	NA	75696074	75695186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75695378_75695520_75695694_75695894
ENSMUST00000038172.16	chr15	+	4338	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	0	2502	0	0	multi-exon	TRUE	canonical	3	174	junction_5	33.0552399611452	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGCAAGTTTGGAAGTG	20	True	NA	28	True	ATTAAA	-31	NA	12205113	12272080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ENSMUST00000038174.8	chr8	-	1356	9	FSM	ENSMUSG00000039720.8	ENSMUST00000038174.8	1356	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	19.421315609402	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27692575	27687486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399
ENSMUST00000038185.10	chr12	+	3310	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_6	24.0724816959116	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2663	False	NA	22	True	AATAAA	-19	NA	80509868	80544896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUST00000038193.15	chr8	-	5083	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_4	5.67718239974725	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATCGTGTACTAACACA	NA	False	NA	-19	True	AGTAAA	-16	NA	112248724	112175428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ENSMUST00000038193.15-0	chr8	-	3563	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	0	1520	0	-109	multi-exon	FALSE	canonical	3	54	junction_4	5.67718239974725	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGCATTCTTTTTCTT	NA	False	NA	-1	True	TATAAA	-35	NA	112248724	112176948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ENSMUST00000038194.5	chr15	-	5684	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	0	0	0	0	multi-exon	TRUE	canonical	3	283	junction_25	31.7407623492731	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTCTAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-20	NA	57998478	57957441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ENSMUST00000038196.7	chr11	+	2499	18	FSM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	22.9555008070187	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6456	False	NA	18	True	TATAAA	-20	NA	87744040	87754629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ENSMUST00000038210.12	chr11	-	3835	23	FSM	ENSMUSG00000036391.17	ENSMUST00000038210.12	3800	23	-220	185	0	-185	multi-exon	FALSE	canonical	3	22	junction_16	14.7653827896746	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTATTTCTCATTTTTT	3780	False	NA	-1	True	AATAAA	-17	NA	51647258	51585646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620403_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ENSMUST00000038211.13	chr11	-	5769	5	FSM	ENSMUSG00000069793.13	ENSMUST00000038211.13	5769	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.8480768249708	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTGTCTTTAAG	7927	False	NA	-6	True	NA	NA	NA	82882656	82869215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82872813_82872979_82873704_82875382_82875518_82878064_82879135_82882413
ENSMUST00000038213.14	chr10	-	4974	28	FSM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	-560	4411	-164	0	multi-exon	FALSE	canonical	2	7	junction_7	6.89744590012349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTTTTATCATTTC	5842	False	NA	-4	True	ATTAAA	-11	NA	9776987	9635701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ENSMUST00000038217.14	chr10	-	1944	6	FSM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	37.9705148766777	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031578	127026246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
ENSMUST00000038228.11	chr2	-	5159	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	13	316	0	-316	multi-exon	FALSE	canonical	3	29	junction_5	5.36808406515884	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTCTTCTGTGTTTAT	2705	False	NA	NA	False	CATAAA	-44	NA	134486052	134436420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
ENSMUST00000038234.13	chr6	+	4056	29	FSM	ENSMUSG00000030323.14	ENSMUST00000038234.13	4056	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_21	12.6374080266743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCAGTGTCTGCGTTT	NA	False	NA	1	True	AATAAA	-13	NA	115830490	115903651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893930_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ENSMUST00000038237.8	chr11	+	2235	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_1	27.0805712775824	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTTTGTAGCTCCTT	NA	False	NA	21	True	ATTAAA	-18	NA	4845342	4878865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUST00000038244.15	chr17	+	1343	4	FSM	ENSMUSG00000034786.18	ENSMUST00000038244.15	1343	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGACTGGTATCTGGGG	NA	False	NA	5	True	AATAAA	-18	NA	34808779	34810728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34809235_34809434_34809538_34809715_34809916_34810143
ENSMUST00000038259.13	chr2	+	3010	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	7.21568539381252	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATGTCTAAGCGTCTG	NA	False	NA	25	True	AATATA	-34	NA	180098037	180116660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ENSMUST00000038275.11	chr13	+	3065	7	FSM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	5.98377435700541	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCTTTGTGATCTTAT	4395	False	NA	NA	False	AATAAA	-15	NA	45543217	45565498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_45543520_45544664_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
ENSMUST00000038281.6	chr16	-	1389	2	FSM	ENSMUSG00000038055.13	ENSMUST00000038281.6	1389	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTGCCTTGTCTGTT	NA	False	NA	0	True	ATTAAA	-20	NA	10360918	10348070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10348677_10360135
ENSMUST00000038287.7	chr19	+	2473	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	7.25718035235908	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATCCTGTTAGTGGTGG	NA	False	NA	79	True	NA	NA	NA	53517539	53530862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
ENSMUST00000038332.9	chr7	+	2475	3	FSM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	1	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTTTGGTCTGGTGTT	NA	False	NA	8	True	NA	NA	NA	43321439	43327722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43321500_43324527_43325071_43325850
ENSMUST00000038341.8	chr2	+	3668	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	0	0	0	0	multi-exon	TRUE	canonical	3	422	junction_10	74.3091181573454	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428691	118472072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ENSMUST00000038343.7	chr11	-	1722	11	FSM	ENSMUSG00000013418.9	ENSMUST00000038343.7	1722	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	6.67907179179862	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGAGCTAGGGTAGGAC	2890	False	NA	NA	False	NA	NA	NA	95805717	95756768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95757103_95757575_95757796_95759175_95759317_95760059_95760248_95764687_95764775_95766923_95767105_95774768_95774807_95779632_95779740_95781798_95781937_95782583_95782800_95805645
ENSMUST00000038356.13	chr3	+	3077	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_1	76.7428968844819	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGGTTCATGTCCACTT	NA	False	NA	NA	False	AATAAA	-43	NA	89680922	89691307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ENSMUST00000038356.13-0	chr3	+	1821	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	0	1256	0	0	multi-exon	TRUE	canonical	3	944	junction_1	76.7428968844819	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTCTTGACTCATC	NA	False	NA	23	True	AAAACA	-22	NA	89680922	89690051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ENSMUST00000038368.9	chr2	+	934	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTGTGACTTCTTGGA	4422	False	NA	13	True	ATTAAA	-17	NA	152578170	152579330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152578666_152578891
ENSMUST00000038369.11	chr12	+	4098	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	86994116	87012136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
ENSMUST00000038374.13	chr14	+	2592	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	20.0942015919555	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTCTGCTTGCAATTTT	NA	False	NA	NA	False	TATAAA	-5	NA	122771750	123127356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ENSMUST00000038377.9	chr10	+	1819	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	0	3182	0	959	multi-exon	FALSE	canonical	3	461	junction_1	0	578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCTCTTGTCATGATTA	NA	False	NA	NA	False	AATAAA	-25	NA	96452867	96455489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_96453335_96454137
ENSMUST00000038379.5	chr19	+	3500	10	FSM	ENSMUSG00000034820.5	ENSMUST00000038379.5	3500	10	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	38.5749230894635	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502629	10525017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUST00000038384.8	chr5	+	2960	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	59.5315042645489	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTGTATTTCCTTGT	NA	False	NA	11	True	AATAAA	-19	NA	86952422	86984516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUST00000038388.7	chr10	+	5858	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_12	27.5850956133924	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	False	NA	14	True	AATAAA	-17	NA	83379804	83432337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUST00000038398.7	chr6	-	3231	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	5.37671748458954	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGACTGGAGTTTATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	39095283	39063343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
ENSMUST00000038403.12	chr6	-	1714	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	361	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	7.8401183423021	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	11	True	NA	-1	True	AATAAA	-35	NA	8778123	8630526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
ENSMUST00000038406.7	chr6	+	1358	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.94999208608714	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGAAGTGATTTTTGAG	NA	False	NA	NA	False	AATAAA	-32	NA	34331053	34345398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
ENSMUST00000038411.5	chr10	+	1411	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCGTTTGCACTCAGGT	NA	False	NA	3	True	AATAAA	-15	NA	80438713	80443488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80438784_80442147
ENSMUST00000038421.8	chr8	+	1220	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	0	1443	0	408	multi-exon	FALSE	canonical	3	365	junction_2	35.9660333586504	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGAGTTTCTGGTGG	8440	False	NA	19	True	AATAAA	-22	NA	26275315	26292560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
ENSMUST00000038422.8	chr12	-	4098	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	856	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCCCTGAGTCAGCAAA	NA	False	NA	-14	True	AATAAA	-16	NA	86931572	86927474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_86927500_86931600
ENSMUST00000038424.14	chr16	-	3095	12	FSM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	19.5329769897639	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGTCATTTAGCATT	8534	False	NA	NA	False	AATAAA	-29	NA	10952514	10892774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ENSMUST00000038431.8	chr11	-	2246	11	FSM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.12290780593665	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGGCTTCCTTGC	6074	False	NA	-1	True	NA	NA	NA	94932180	94917083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ENSMUST00000038434.4	chr4	-	856	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	9620	False	NA	-17	True	AATAAA	-14	NA	41713534	41712032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41712815_41713460
ENSMUST00000038439.4	chr2	-	1008	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	69.3010822426317	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTACTTTTCTTCCTCTTG	NA	False	NA	-4	True	AATAAA	-15	NA	119039276	119002980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ENSMUST00000038446.10	chr17	-	960	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	360	823	0	70	multi-exon	FALSE	canonical	3	1955	junction_2	187.919013289118	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGCTGACTCAAGTGG	3404	False	NA	-14	True	AATAAA	-20	NA	71297525	71280950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
ENSMUST00000038447.6	chr1	+	2146	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	4.06939798987516	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCCTTATTTGGAG	NA	False	NA	12	True	NA	NA	NA	21021911	21061065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
ENSMUST00000038463.15	chr4	+	4045	12	FSM	ENSMUSG00000035275.15	ENSMUST00000038463.15	4045	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	7.48773101162691	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTAGTATGTTTATTGT	NA	False	NA	8	True	ATTAAA	-18	NA	100926179	101009567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_100926527_100953449_100953517_100959804_100960275_100964399_100964592_100977649_100977777_100988460_100988544_100990783_100990889_100991051_100991164_100993193_100993451_100994907_100995017_100996291_100996429_101007528
ENSMUST00000038472.7	chrX	-	2221	9	FSM	ENSMUSG00000034551.13	ENSMUST00000038472.7	9385	9	0	7164	0	-7164	multi-exon	FALSE	canonical	1	2	junction_8	2.9474565306379	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAATGGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	110606776	110486793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_110487096_110492491_110492615_110498891_110498976_110502657_110502738_110510314_110510523_110531997_110532145_110559533_110559588_110569330_110570441_110606663
ENSMUST00000038474.14	chr2	+	1686	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_6	46.6797600679352	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGAGTCTCACCGCGT	NA	False	NA	NA	False	AATAAA	-16	NA	31560726	31571361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ENSMUST00000038488.17	chr9	-	4248	26	FSM	ENSMUSG00000034908.17	ENSMUST00000038488.17	4248	26	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_16	17.0789226826519	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGGTGCAGGAG	NA	False	NA	-14	True	AATAAA	-34	NA	45866556	45849154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ENSMUST00000038489.6	chr9	+	2324	3	FSM	ENSMUSG00000034910.6	ENSMUST00000038489.6	7916	3	-573	6165	-573	-6165	multi-exon	FALSE	canonical	2	7	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACACAAAAGCCTCTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	72832353	72853298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72833243_72850201_72850288_72851949
ENSMUST00000038498.10	chr8	-	4876	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_2	10.356157588604	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTTCTCTCTAGCA	NA	False	NA	NA	False	AATAAA	-25	NA	26275315	26254565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ENSMUST00000038514.15	chr5	-	2352	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	63.2088235288462	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGTTTTATTT	NA	False	NA	0	True	AATAAA	-25	NA	92583078	92563398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUST00000038521.14	chr7	+	1365	5	FSM	ENSMUSG00000035585.17	ENSMUST00000038521.14	1365	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	497.531908524468	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTGAGTCCTTAC	2175	False	NA	6	True	AATAAA	-16	NA	3696763	3704011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698362_3698621_3703526
ENSMUST00000038522.10	chr14	-	4501	23	FSM	ENSMUSG00000021870.18	ENSMUST00000038522.10	4501	23	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_11	43.2750190378615	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26254895	26134329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUST00000038523.15	chr10	+	3069	10	FSM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	27.2890336586822	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	22	True	AATAAA	-23	NA	84753479	84852311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84850939
ENSMUST00000038537.9	chr7	-	1962	8	FSM	ENSMUSG00000036459.16	ENSMUST00000038537.9	1962	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_5	31.7027005866976	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGGTGGTTATTTCTC	NA	False	NA	-2	True	AATATA	-20	NA	33832693	33808967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ENSMUST00000038539.8	chr14	+	1843	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTGGTGATTCACAT	NA	False	NA	NA	False	AATAAA	-26	NA	54923672	54928198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54924578_54927260
ENSMUST00000038551.8	chr17	+	3141	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	9.91871727497827	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCGGTCTGTGACAGTG	NA	False	NA	16	True	AATAAA	-17	NA	88837545	88895795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ENSMUST00000038552.13	chr16	-	4296	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_15	10.2195380265448	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGCAGTGTCTCTCATC	NA	False	NA	NA	False	NA	NA	NA	4497641	4443996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ENSMUST00000038558.9	chr10	-	2674	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCTTCTGTCTGTCTG	8706	False	NA	-6	True	ATTAAA	-18	NA	80413155	80402957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80405057_80412580
ENSMUST00000038562.9	chr4	-	3092	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	6.5	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCGAGTCCTTTCGTGC	NA	False	NA	3	True	AATAAA	-24	NA	150039500	149980739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149982799_149990872_149991715_150039309
ENSMUST00000038569.8	chr3	+	2481	3	FSM	ENSMUSG00000037211.13	ENSMUST00000038569.8	2481	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694106	37698747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37694255_37694668_37694958_37696703
ENSMUST00000038570.9	chr11	+	1926	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_6	68.3294488507475	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823950	4844200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUST00000038572.15	chr7	+	2142	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	0	0	0	0	multi-exon	FALSE	canonical	3	4757	junction_8	508.744178235868	5104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510314	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUST00000038574.7	chr13	+	4682	27	FSM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	0	0	0	0	multi-exon	TRUE	canonical	3	222	junction_12	28.2580040501697	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113063987	113105966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ENSMUST00000038584.9	chr2	-	4280	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	0	0	0	0	multi-exon	TRUE	canonical	3	163	junction_17	29.5425886295749	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656072	70542750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ENSMUST00000038600.4	chr2	+	2080	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	49.4592986426438	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTCTAGAACTTTGAAC	NA	False	NA	28	True	NA	NA	NA	28358077	28361190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ENSMUST00000038608.14	chr7	-	2878	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7393	False	NA	-2	True	AATAAA	-15	NA	3696522	3680787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ENSMUST00000038608.14-0	chr7	-	2307	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	571	0	0	0	multi-exon	FALSE	canonical	3	178	junction_4	25.6960252623964	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7964	False	NA	-2	True	AATAAA	-15	NA	3695951	3680787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ENSMUST00000038614.12	chr7	+	973	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	12.73528562695	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCTCACATGGAAT	8221	False	NA	17	True	AATAAA	-18	NA	126376126	126379686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
ENSMUST00000038618.13	chr7	-	5386	33	FSM	ENSMUSG00000040488.19	ENSMUST00000038618.13	5386	33	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_32	158.898146917294	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCCTGCCTTTTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	27037117	27004560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ENSMUST00000038626.10	chr8	-	980	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_3	27.2304976083802	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	-2	True	ATTAAA	-17	NA	71213592	71211294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
ENSMUST00000038627.9	chr19	-	5531	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_5	14.0003571383019	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTGTTTCCTTTTAA	NA	False	NA	-4	True	AATAAA	-18	NA	12773490	12744383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ENSMUST00000038644.5	chr11	-	820	5	FSM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	47.2989164780759	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCCTTCAAATCTA	7236	False	NA	-2	True	AATAAA	-22	NA	68864669	68863309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467
ENSMUST00000038650.9	chr7	+	4716	14	FSM	ENSMUSG00000033904.17	ENSMUST00000038650.9	4716	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_12	14.2334716768725	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGTTGGATCTCTTT	NA	False	NA	7	True	AATAAA	-17	NA	118314596	118336244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
ENSMUST00000038671.10	chr9	-	2598	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_10	26.4070697604511	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCCCATCCCTTCCCA	NA	False	NA	-9	True	AATAAA	-19	NA	21199265	21184752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ENSMUST00000038675.7	chr7	+	543	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	149	0	0	0	multi-exon	FALSE	canonical	3	973	junction_1	229.96847610053	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGACACTTTGCCTT	NA	False	NA	2	True	AATAAA	-20	NA	142086897	142094484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUST00000038677.5	chr19	-	4340	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_16	39.9184430265499	845	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGATGAGTGGCTTGGC	NA	False	NA	-8	True	AATAAA	-20	NA	41884612	41851289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ENSMUST00000038690.6	chr13	+	1992	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	29	893	0	0	multi-exon	FALSE	canonical	3	129	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	10	True	ATTAAA	-17	NA	14804861	14812788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_14804950_14810884
ENSMUST00000038696.12	chr11	+	4508	10	FSM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	8.0691456246068	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGCCTGGTTTCTTGA	NA	False	NA	20	True	CATAAA	-16	NA	94881860	94897725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94883745_94887360_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ENSMUST00000038699.13	chr5	+	3689	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGAGGGCGCGGTGTCTT	8700	False	NA	4	True	AATAAA	-14	NA	142449808	142464465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ENSMUST00000038699.13-0	chr5	+	2781	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	0	908	0	0	multi-exon	FALSE	canonical	3	53	junction_8	14.9769353924626	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8700	False	NA	14	True	AATAAA	-19	NA	142449808	142463557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ENSMUST00000038701.8	chr7	+	4315	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGAGTCAGCACAGACA	NA	False	NA	NA	False	ATTAAA	-20	NA	12699764	12707749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
ENSMUST00000038701.8-0	chr7	+	2609	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	7	1699	0	1411	multi-exon	FALSE	canonical	1	2	junction_1	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCGTGACACATGACTT	NA	False	NA	NA	False	TATAAA	-16	NA	12699771	12706050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
ENSMUST00000038709.14	chr11	-	2417	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.4790273403101	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121120135	121113413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
ENSMUST00000038719.8	chr15	-	2600	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCATTGTTTAGATTGGT	NA	False	NA	71	True	AATAAA	-19	NA	44291703	44239466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ENSMUST00000038719.8-0	chr15	-	3021	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	419	-840	0	840	multi-exon	FALSE	canonical	3	194	junction_5	53.0869308043159	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTAGTGATGTTTG	NA	False	NA	-9	True	AATAAA	-16	NA	44291284	44238626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ENSMUST00000038738.7	chr8	-	3464	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	33.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAATGTGTGCTCTCAT	NA	False	NA	NA	False	TATAAA	-45	NA	48166967	48162378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48165330_48165953_48166054_48166554
ENSMUST00000038738.7-0	chr8	-	2581	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	1	882	0	-781	multi-exon	FALSE	canonical	3	60	junction_1	33.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTGTTTTTTTTTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	48166966	48163260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48165330_48165953_48166054_48166554
ENSMUST00000038739.5	chr8	-	4443	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_9	43.0880074833925	922	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	5496	False	NA	-9	True	AATAAA	-17	NA	112026854	111997575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ENSMUST00000038753.6	chr11	+	7413	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTGCCTAGAAACAGG	271	False	NA	NA	False	AATAAA	-13	NA	32297819	32378173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ENSMUST00000038753.6-0	chr11	+	3493	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	20	3900	0	-3900	multi-exon	FALSE	canonical	3	19	junction_11	4.75146176338281	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGGTCCATGAGTGCTT	291	False	NA	NA	False	NA	NA	NA	32297839	32374273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ENSMUST00000038760.10	chr1	+	2993	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCACATAAACTCCGT	5618	False	NA	NA	False	NA	NA	NA	135746335	135761080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
ENSMUST00000038760.10-0	chr1	+	2283	10	FSM	ENSMUSG00000041782.15	ENSMUST00000038760.10	2993	10	326	384	326	251	multi-exon	FALSE	canonical	3	102	junction_3	17.5119007154183	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTAAGTGTCTGGTA	5944	False	NA	9	True	NA	NA	NA	135746661	135760696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135746755_135753492_135753631_135754901_135755785_135756452_135756558_135757426_135757471_135758637_135758711_135758820_135758959_135759262_135759350_135759611_135759687_135760049
ENSMUST00000038765.6	chr1	-	4255	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCCTTGTGTGATG	NA	False	NA	-3	True	AATAAA	-17	NA	119349978	119343194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119345828_119348356
ENSMUST00000038765.6-0	chr1	-	3129	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	1126	0	1126	0	multi-exon	FALSE	canonical	3	45	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCCTTGTGTGATG	NA	False	NA	-3	True	AATAAA	-17	NA	119348852	119343194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119345828_119348356
ENSMUST00000038770.4	chr16	+	2829	2	FSM	ENSMUSG00000039646.6	ENSMUST00000038770.4	2829	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGCTTGAGATTTAAGG	NA	False	NA	NA	False	AATAAA	-28	NA	4457804	4468666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4458013_4466045
ENSMUST00000038772.13	chr10	-	1546	7	FSM	ENSMUSG00000034620.18	ENSMUST00000038772.13	1546	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	137.068920214937	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933061	121917164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932252_121932367_121932804
ENSMUST00000038782.4	chr1	-	1546	12	FSM	ENSMUSG00000040629.9	ENSMUST00000038782.4	1546	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	4.55453638177285	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCACTCTTGCTTGTT	NA	False	NA	-7	True	ATTAAA	-22	NA	166066313	166028953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_166029305_166029843_166029920_166032358_166032492_166033421_166033485_166053158_166053301_166053405_166053461_166054134_166054260_166061733_166061776_166062969_166063126_166064441_166064542_166065831_166065925_166066103
ENSMUST00000038791.15	chr7	-	1582	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	0	0	0	0	multi-exon	TRUE	canonical	3	428	junction_5	40.804901666344	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTACTGATCTTCTGGT	NA	False	NA	3	True	AATAAA	-28	NA	118305001	118287767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ENSMUST00000038794.6	chr17	-	3374	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_20	12.6925174807837	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAGAAGTAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	56525889	56493816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ENSMUST00000038830.10	chr19	-	1614	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	6.94422221866655	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTCTTGTTGTTGT	453	False	NA	NA	False	AATAAA	-21	NA	21630340	21574675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ENSMUST00000038863.9	chr9	+	3029	21	FSM	ENSMUSG00000035202.9	ENSMUST00000038863.9	3894	21	3	862	0	-97	multi-exon	FALSE	canonical	3	23	junction_18	9.12359578236564	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCGAGCTCAGGGAGGAC	NA	False	NA	NA	False	NA	NA	NA	123195994	123290867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015_123224077_123238678_123238769_123240937_123241082_123247243_123247352_123247699_123247860_123256511_123256617_123260950_123261067_123265181_123265466_123267199_123267299_123270528_123270667_123281809_123281911_123282275_123282459_123283774_123283945_123284024_123284103_123284957_123285070_123288556_123288685_123290563
ENSMUST00000038867.13	chr16	+	3230	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTACGTGTGTTCCAGG	NA	False	NA	6	True	AATAAA	-16	NA	29398197	29470694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUST00000038867.13-0	chr16	+	5937	30	FSM	ENSMUSG00000038084.17	ENSMUST00000038867.13	3230	30	12	-2719	0	-289	multi-exon	FALSE	canonical	3	139	junction_4	99.4304230950511	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTATTGGAGAGTATC	NA	False	NA	12	True	ATTAAA	-23	NA	29398209	29473413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUST00000038868.14	chr4	+	2466	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	15.2103309190388	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGTATTTTCATAGGT	NA	False	NA	20	True	AATAAA	-35	NA	111577180	111686339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ENSMUST00000038876.13	chr7	-	629	5	FSM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	102	5	0	0	multi-exon	FALSE	canonical	3	47	junction_4	7.77817459305202	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTCGGCTCCTCTT	4460	False	NA	NA	False	AATAAA	-15	NA	45570726	45567451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570665
ENSMUST00000038890.6	chr9	+	8645	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	5.48643874485172	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGATAATTATTATTTAT	NA	False	NA	3	True	AATAAA	-18	NA	64718621	64826949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ENSMUST00000038893.6	chr4	+	3767	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	0	0	0	0	multi-exon	FALSE	canonical	3	3313	junction_2	495.610285966257	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	2381	False	NA	28	True	AATAAA	-21	NA	140428783	140450531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUST00000038913.16	chr7	+	2822	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_1	78.9623448430591	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2812	False	NA	NA	False	AATAAA	-23	NA	3648350	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ENSMUST00000038926.13	chr12	-	6188	27	FSM	ENSMUSG00000035021.14	ENSMUST00000038926.13	6188	27	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_11	12.1348439573743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55033121	54939773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965349_54967817_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974499_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ENSMUST00000038942.10	chr3	+	4479	11	FSM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.4367827643966	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTTCTTCTCTTCTC	4368	False	NA	35	True	AATAAA	-24	NA	89344012	89358259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ENSMUST00000038942.10-0	chr3	+	2443	11	FSM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	48	1988	0	-1988	multi-exon	FALSE	canonical	3	58	junction_1	11.4367827643966	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAGAAAAAAAAAA	4416	False	NA	NA	False	NA	NA	NA	89344060	89356271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ENSMUST00000038945.6	chr1	+	1435	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_1	0	670	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTACTGAGTGAAATTC	6745	False	NA	22	True	AATGAA	-29	NA	135693856	135696874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135694633_135696215
ENSMUST00000038973.7	chr17	-	1234	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGGTTATGTATTATA	NA	False	NA	85	True	ATTAAA	-32	NA	25459090	25453290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUST00000038973.7-0	chr17	-	1138	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	-8	104	0	-104	multi-exon	FALSE	canonical	3	143	junction_3	15.4275727189989	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCATACTGATAAAAAATA	NA	False	NA	-19	True	AATAAA	-20	NA	25459098	25453394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUST00000039007.7	chr2	-	1880	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCGGAGACCTGGAACA	NA	False	NA	-17	True	NA	NA	NA	165335244	165332029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165333632_165334966
ENSMUST00000039011.4	chr9	+	1162	1	FSM	ENSMUSG00000035337.4	ENSMUST00000039011.4	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTAGGCCTCGCCGTCC	3207	False	NA	NA	False	AATATA	-28	NA	64142482	64143644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64142500_64143600
ENSMUST00000039013.15	chr17	+	6476	33	FSM	ENSMUSG00000024130.17	ENSMUST00000039013.15	6476	33	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5.69230566203186	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTTTGAGTCATACAT	NA	False	NA	10	True	AATAAA	-17	NA	24570996	24629175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24571226_24576892_24576966_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ENSMUST00000039016.14	chr19	+	3062	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	41.4517792139252	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTTAAAAAAAAAA	1252	False	NA	NA	False	NA	NA	NA	45003303	45015469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUST00000039021.11	chr3	+	3410	14	FSM	ENSMUSG00000036825.13	ENSMUST00000039021.11	3410	14	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_10	37.3226774028969	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAAGTGAAGCCTTGTGT	NA	False	NA	11	True	ATTAAA	-13	NA	146110418	146145888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_146110540_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUST00000039026.8	chrX	-	3149	3	FSM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCCCATCTGTCTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	47123730	47114022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47116585_47117170_47117343_47123315
ENSMUST00000039048.2	chr19	+	1882	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	53.9897109539298	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGGGTCTGTGTG	NA	False	NA	11	True	ATTAAA	-23	NA	3758332	3767881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ENSMUST00000039049.16	chr7	-	967	5	FSM	ENSMUSG00000040231.17	ENSMUST00000039049.16	967	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	22.466641938661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCCTGTCTGTTCCTC	NA	False	NA	-3	True	AGTAAA	-29	NA	45546138	45536268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45536550_45536790_45536931_45538035_45538274_45545114_45545316_45546031
ENSMUST00000039059.8	chr9	+	3876	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	6.25	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCCAAACAAGTCCAC	NA	False	NA	NA	False	AATAAA	-13	NA	45817794	45841010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUST00000039061.15	chr8	-	4332	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_18	20.4181612288351	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTGGTTTTCTTTTAT	4054	False	NA	3	True	AATAAA	-29	NA	47986502	47943149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ENSMUST00000039071.3	chr11	-	3705	6	FSM	ENSMUSG00000040373.13	ENSMUST00000039071.3	3705	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.72046505340853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGTCTTTCCTTGGAC	NA	False	NA	NA	False	TATAAA	-18	NA	107805881	107765496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
ENSMUST00000039071.3-0	chr11	-	2873	6	FSM	ENSMUSG00000040373.13	ENSMUST00000039071.3	3705	6	0	832	0	-832	multi-exon	FALSE	canonical	2	4	junction_5	1.72046505340853	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTATGAATATAATCATT	NA	False	NA	NA	False	NA	NA	NA	107805881	107766328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107768436_107768720_107768867_107772422_107772564_107773714_107773802_107775171_107775408_107805725
ENSMUST00000039088.9	chr11	+	1745	3	FSM	ENSMUSG00000039329.9	ENSMUST00000039088.9	1745	3	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_1	1	750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTATGTGTATGGTTT	NA	False	NA	26	True	AATAAA	-20	NA	121036968	121039145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_121037049_121037353_121037428_121037554
ENSMUST00000039101.12	chr16	-	2009	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	7.71362431027076	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCTTGTTATCAGTAG	NA	False	NA	-4	True	AATAAA	-17	NA	87237461	87230294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
ENSMUST00000039110.12	chr3	+	3250	13	FSM	ENSMUSG00000042626.14	ENSMUST00000039110.12	3250	13	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_1	89.6222008705928	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325749	89337322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUST00000039118.7	chr14	-	4767	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTGCTACATTTTATC	NA	False	NA	-26	True	AATAAA	-13	NA	122703089	122694206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_122697188_122701303
ENSMUST00000039118.7-0	chr14	-	3309	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	1458	0	1458	0	multi-exon	FALSE	canonical	3	83	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTGCTACATTTTATC	NA	False	NA	-26	True	AATAAA	-13	NA	122701631	122694206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_122697188_122701303
ENSMUST00000039132.9	chr17	+	2376	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	5.18544972870135	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTTGGCTGGCATAG	NA	False	NA	NA	False	AATAAA	-37	NA	33184787	33198207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ENSMUST00000039135.6	chr14	-	9988	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_21	9.78869405661972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTTTAGCTGGTT	NA	False	NA	-12	True	ATTAAA	-24	NA	68170881	67989583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ENSMUST00000039135.6-1	chr14	-	6643	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	-139	3484	-129	0	multi-exon	FALSE	canonical	3	67	junction_21	9.78869405661972	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAGTGAATTTTATTG	NA	False	NA	1	True	NA	NA	NA	68171020	67993067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ENSMUST00000039144.7	chr4	+	3319	19	FSM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	165.993641109799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGCAGTCAGTAACCATT	NA	False	NA	NA	False	NA	NA	NA	149671094	149732356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUST00000039144.7-0	chr4	+	4489	19	FSM	ENSMUSG00000039953.14	ENSMUST00000039144.7	3319	19	-170	-1000	0	0	multi-exon	FALSE	canonical	3	19	junction_2	165.993641109799	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670924	149733356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUST00000039146.4	chr11	-	2046	3	FSM	ENSMUSG00000039337.4	ENSMUST00000039146.4	2046	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	13.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTGCAGTCTCCTCAT	NA	False	NA	0	True	AATAAA	-19	NA	121009503	121007040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_121008523_121008652_121008727_121009013
ENSMUST00000039152.14	chr11	+	4325	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_7	24.6553097226675	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTTTATTATGACTTT	NA	False	NA	26	True	NA	NA	NA	101623775	101658184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
ENSMUST00000039153.14	chr3	-	2020	9	FSM	ENSMUSG00000040774.16	ENSMUST00000039153.14	2020	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	105.137930239281	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTTTTTTCTCAATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	106455047	106410298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106427324_106427410_106438452_106438595_106440670_106440819_106446505_106446920_106454995
ENSMUST00000039156.7	chr2	-	591	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	346	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	2.5	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGACTTGTGTCTTGC	5546	False	NA	-8	True	ATTAAA	-20	NA	25464890	25463441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25463712_25464199_25464325_25464694
ENSMUST00000039161.10	chr9	+	918	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_7	172.705955134082	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAAGTGTTTTCTTCT	NA	False	NA	34	True	AATAAA	-15	NA	26911017	26918630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ENSMUST00000039165.15	chr2	-	4521	23	FSM	ENSMUSG00000026754.17	ENSMUST00000039165.15	4869	23	0	348	0	0	multi-exon	FALSE	canonical	3	9	junction_22	11.0304799353113	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955553	38906514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ENSMUST00000039173.13	chr1	+	4328	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	18.9304244376019	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATAATGCAGACTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	105591607	105681800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ENSMUST00000039174.11	chr10	-	5281	8	FSM	ENSMUSG00000038151.14	ENSMUST00000039174.11	5281	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	19.4967291867019	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAATGCTTGTCTAGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	44334744	44313172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44332976_44333056_44334462
ENSMUST00000039197.9	chr3	-	2620	15	FSM	ENSMUSG00000039865.9	ENSMUST00000039197.9	2620	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	3.70672307009404	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTTGTTCATCTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	121326053	121253176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_121253726_121254750_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325315_121325421_121325809
ENSMUST00000039204.10	chr4	-	4493	28	FSM	ENSMUSG00000040964.17	ENSMUST00000039204.10	4493	28	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_21	42.1702734351014	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376061	140241795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ENSMUST00000039205.11	chr17	+	2314	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	8.09149072929224	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGACTCTTGTTCTTTTG	NA	False	NA	11	True	AATAAA	-19	NA	80434899	80492530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
ENSMUST00000039213.15	chr9	-	5650	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTAGCGTGTGTTTG	NA	False	NA	-7	True	AATAAA	-16	NA	85631387	85569412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ENSMUST00000039213.15-0	chr9	-	5453	29	FSM	ENSMUSG00000035941.16	ENSMUST00000039213.15	5650	29	0	197	0	0	multi-exon	FALSE	canonical	3	145	junction_19	26.8952047922362	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTAAAATGTGT	NA	False	NA	-25	True	ATTAAA	-3	NA	85631387	85569609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604506_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ENSMUST00000039229.8	chr9	-	5310	9	FSM	ENSMUSG00000035498.11	ENSMUST00000039229.8	5310	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.31695671910659	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTTCATTTGTTTAAT	6331	False	NA	NA	False	AATAAA	-18	NA	123045103	122999888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_123002992_123004799_123004885_123006752_123007119_123009049_123009431_123011229_123011452_123012521_123012891_123014117_123014481_123018985_123019196_123044892
ENSMUST00000039234.10	chr4	+	2546	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	14.7627063914446	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTAAGAATCTTT	NA	False	NA	NA	False	AATAAA	-44	NA	22357542	22434091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ENSMUST00000039247.11	chr18	-	4630	17	FSM	ENSMUSG00000024331.12	ENSMUST00000039247.11	4630	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.14907745770069	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGCAGGTGGTGAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	20192611	20163689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_20165461_20165546_20165593_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ENSMUST00000039271.7	chr10	-	4229	6	FSM	ENSMUSG00000060301.7	ENSMUST00000039271.7	4229	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2.33238075793812	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCAGGATATTTTATAA	NA	False	NA	0	True	NA	NA	NA	78933434	78900207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78903886_78904467_78904563_78924120_78924214_78928245_78928339_78930264_78930392_78933291
ENSMUST00000039280.9	chr16	-	4266	20	FSM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	46.4080420960757	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGTGCTCTCTATTTT	NA	False	NA	NA	False	TTTAAA	-33	NA	90081313	90025942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ENSMUST00000039286.5	chr10	+	2352	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	36.7828709025918	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144353	44240287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUST00000039318.16	chr13	-	5859	14	FSM	ENSMUSG00000033102.16	ENSMUST00000039318.16	5859	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	21.3895954356179	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGTTGTATTCAC	9676	False	NA	NA	False	ATTAAA	-15	NA	64422802	64340358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ENSMUST00000039331.9	chr4	-	1979	10	FSM	ENSMUSG00000040972.9	ENSMUST00000039331.9	1979	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	13.4421485642992	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCCCTATATTTTTC	NA	False	NA	1	True	ATTAAA	-28	NA	139974095	139754156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_139754390_139755034_139755074_139755359_139755553_139756008_139756095_139761661_139762137_139764733_139764850_139794447_139794567_139834565_139834688_139884771_139884885_139973612
ENSMUST00000039333.10	chr8	+	4938	18	FSM	ENSMUSG00000033624.11	ENSMUST00000039333.10	4938	18	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	8.20878085010087	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTAGCA	NA	False	NA	NA	False	AATACA	-31	NA	111821272	111863706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111821459_111828445_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
ENSMUST00000039349.8	chr12	-	3721	22	FSM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	5.74791690552625	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAATAGGGGCTTACTA	NA	False	NA	NA	False	AGTAAA	-17	NA	116226642	116170670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ENSMUST00000039349.8-0	chr12	-	3290	22	FSM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	36	395	0	0	multi-exon	FALSE	canonical	3	13	junction_13	5.74791690552625	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGTGAACATTTTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	116226606	116171065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ENSMUST00000039373.14	chr5	-	6590	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_13	11.1589632554956	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCTTGAGTTGCAACT	7088	False	NA	-4	True	NA	NA	NA	86320662	86257145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
ENSMUST00000039373.14-0	chr5	-	5591	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	64	935	0	-935	multi-exon	FALSE	canonical	3	104	junction_13	11.1589632554956	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGCTGGAGTTGTAACT	7152	False	NA	NA	False	NA	NA	NA	86320598	86258080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
ENSMUST00000039374.9	chrX	+	3766	17	FSM	ENSMUSG00000035967.16	ENSMUST00000039374.9	3766	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	18.8414436814168	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTAGGTGTATGTC	NA	False	NA	15	True	AATAAA	-26	NA	55500236	55553199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUST00000039375.7	chr17	-	358	1	FSM	ENSMUSG00000037064.7	ENSMUST00000039375.7	358	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTTTCCAGTCCTTGT	NA	False	NA	-87	True	NA	NA	NA	78485376	78485018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_78485000_78485400
ENSMUST00000039388.3	chr11	+	1382	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	2550	False	NA	NA	False	ATTAAA	-18	NA	101556366	101558658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101556464_101557373
ENSMUST00000039408.3	chr16	+	2918	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	18.1995115929583	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGTGACCTTCGATT	NA	False	NA	19	True	AATAAA	-19	NA	16031181	16090576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUST00000039412.15	chr8	+	4662	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645146	18853205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ENSMUST00000039412.15-0	chr8	+	3681	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	33	948	0	-948	multi-exon	FALSE	canonical	3	150	junction_4	12.6528524276628	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTATTAAGAGATTTGT	NA	False	NA	-3	True	NA	NA	NA	18645179	18852257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ENSMUST00000039438.9	chr7	-	3977	14	FSM	ENSMUSG00000059146.13	ENSMUST00000039438.9	3977	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	6.48804088737217	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	78227730	77950437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_77952496_77954039_77954175_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283
ENSMUST00000039442.12	chr3	+	2037	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCAGGTATTTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	121085421	121156743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ENSMUST00000039442.12-0	chr3	+	963	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	0	1074	0	313	multi-exon	FALSE	canonical	3	72	junction_1	14.5143607047182	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGTTCTCTTGGGAC	NA	False	NA	25	True	AATAAA	-26	NA	121085421	121155669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ENSMUST00000039449.9	chr16	-	7743	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCCATTCTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	87229500	87173538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ENSMUST00000039449.9-1	chr16	-	6762	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	49	932	0	-932	multi-exon	FALSE	canonical	3	140	junction_26	19.3535231547588	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTAGTCAAAATGACTG	NA	False	NA	-10	True	AATAAA	-15	NA	87229451	87174470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ENSMUST00000039450.5	chr3	+	2991	12	FSM	ENSMUSG00000036853.6	ENSMUST00000039450.5	2991	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.7721444263289	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGGAAGACTCTTGAC	NA	False	NA	NA	False	NA	NA	NA	145827426	145847561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145827776_145830499_145830668_145833857_145834012_145834637_145834723_145834850_145834948_145836901_145837002_145839404_145839518_145839594_145839745_145843012_145843115_145843201_145843325_145845125_145845333_145846218
ENSMUST00000039476.15	chr3	+	6776	40	FSM	ENSMUSG00000041977.19	ENSMUST00000039476.15	6776	40	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	19.3349315805408	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATTGTGGTTGTATGA	6168	False	NA	11	True	AAGAAA	-12	NA	87524881	87645340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
ENSMUST00000039480.7	chr8	-	4344	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	0	281	0	-281	multi-exon	TRUE	canonical	3	19	junction_10	5.27694550342846	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTTTTAACTTCAAGAC	6086	False	NA	-15	True	AAAAAG	-12	NA	84963684	84937587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
ENSMUST00000039487.10	chr17	+	2245	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	0	0	0	0	multi-exon	FALSE	canonical	3	932	junction_1	74.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGGAGAGAGCAAGTG	1690	False	NA	NA	False	ATTAAA	-24	NA	6130060	6136792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6130187_6131076_6131150_6134746
ENSMUST00000039487.10-0	chr17	+	809	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	51	1385	0	0	multi-exon	FALSE	canonical	3	932	junction_1	74.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTTTACCCTGGGTAT	1741	False	NA	29	True	ATTAAA	-33	NA	6130111	6135407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6130187_6131076_6131150_6134746
ENSMUST00000039506.15	chr1	+	2278	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_3	44.2329691017408	1075	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTGTGTCTTCTCTT	3743	False	NA	19	True	AATAAA	-19	NA	172139933	172147408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUST00000039516.4	chr12	-	1929	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	55	678	55	-678	multi-exon	FALSE	canonical	3	55	junction_3	5.24404424085076	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGAGTTCTTCCACATC	NA	False	NA	NA	False	AATAAA	-14	NA	54250591	54226444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
ENSMUST00000039517.11	chr3	+	5495	7	FSM	ENSMUSG00000036863.13	ENSMUST00000039517.11	5495	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTATTGTAATTGATTT	NA	False	NA	5	True	ATTAAA	-16	NA	145693624	145727475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ENSMUST00000039537.14	chr3	+	2800	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	52.7870167352017	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	15	True	AATAAA	-16	NA	95190254	95203477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
ENSMUST00000039538.15	chr13	+	5844	23	FSM	ENSMUSG00000039219.19	ENSMUST00000039538.15	5844	23	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_16	16.774390161471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAGAAAAAAAAAAA	1436	False	NA	NA	False	NA	NA	NA	14238376	14374188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ENSMUST00000039541.12	chr2	+	4206	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_12	42.7635326321784	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001695	121029251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUST00000039545.5	chrX	+	4407	8	FSM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	60.7816433083649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152142608	152178793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_152142706_152142837_152142961_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ENSMUST00000039551.9-1	chr2	+	1673	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	94	1181	71	-1181	multi-exon	FALSE	canonical	3	712	junction_2	38.5	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTGGCCTCAGTTCTT	8990	False	NA	3	True	ATTAAA	-16	NA	181506223	181511442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181506363_181507738_181507827_181509996
ENSMUST00000039554.7	chr2	-	2828	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	30.9683709613535	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	-12	True	AATAAA	-23	NA	132657974	132646126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ENSMUST00000039557.9	chr10	+	3651	15	FSM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	3.14934395500694	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCCTATTTACTACTA	NA	False	NA	103	True	AATAAA	-20	NA	26648472	26794644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26788602_26788728_26792388_26792451_26793000
ENSMUST00000039562.8	chr14	+	1550	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	49	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	18	True	AATAAA	-16	NA	61836988	61843395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_61837020_61837242_61837345_61841978
ENSMUST00000039571.14	chr3	+	1547	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_2	10.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTAGCATCTTGTTT	NA	False	NA	5	True	ATTAAA	-19	NA	145643768	145650584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145644084_145644652_145644852_145649551
ENSMUST00000039571.14-0	chr3	+	932	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	28	587	0	0	multi-exon	FALSE	canonical	3	242	junction_2	10.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGATGATCATGGAAATAA	NA	False	NA	-10	True	NA	NA	NA	145643796	145649997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145644084_145644652_145644852_145649551
ENSMUST00000039577.8	chr17	+	2574	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	22.3271135617661	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTCTCTCTCTCTGT	NA	False	NA	2	True	AATAAA	-18	NA	21670635	21685849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
ENSMUST00000039581.14	chr11	+	2304	9	FSM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.99843725578305	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGGGGCATTCCTGGA	3688	False	NA	NA	False	AATAAA	-17	NA	101473067	101482614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101473152_101473450_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
ENSMUST00000039601.10	chr11	+	821	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_3	16.768646337734	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	False	NA	21	True	AATAAA	-22	NA	32155414	32158984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
ENSMUST00000039608.9	chr18	+	2456	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_13	17.5886149255705	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151855	75420035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUST00000039610.10	chr9	+	3383	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	12.9909750249458	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACCTAAAATCCACCT	NA	False	NA	11	True	AATAAA	-11	NA	119186446	119222386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ENSMUST00000039620.7	chr16	+	1170	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	11	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGGTTTTTGTTTGT	NA	False	NA	20	True	ATTAAA	-22	NA	93480102	93487878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93480502_93481934_93482043_93487215
ENSMUST00000039659.9	chr16	+	1237	3	FSM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	12.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGAGCTCTGGCCTCT	NA	False	NA	NA	False	NA	NA	NA	93404724	93407393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93405143_93405676_93405785_93406682
ENSMUST00000039662.9	chr9	-	8052	58	FSM	ENSMUSG00000052698.16	ENSMUST00000039662.9	8052	58	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_57	18.6226231490539	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACTGTTACCAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	67446674	67128419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67446613
ENSMUST00000039665.8	chr15	+	2255	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	8.88852727732572	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGGGCAGCCAGTG	NA	False	NA	8	True	AATAAA	-17	NA	98972858	98981284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ENSMUST00000039672.6	chr1	-	3160	6	FSM	ENSMUSG00000041945.13	ENSMUST00000039672.6	3160	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.46969384566991	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGTGTGTGTGTCGTGT	NA	False	NA	NA	False	ATTAAA	-14	NA	40829823	40811197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829644
ENSMUST00000039674.13	chr9	-	3632	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	4.65698400254929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATGCACAGTTCTCTC	NA	False	NA	-5	True	AGTAAA	-19	NA	37058703	36802277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
ENSMUST00000039680.7	chr6	+	3746	9	FSM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	10.4403065089106	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGCTTCTGGTTTCT	NA	False	NA	33	True	ATTAAA	-38	NA	127430685	127471224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
ENSMUST00000039694.13	chr13	-	1327	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_8	60.3857392105123	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579965	19541845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUST00000039697.14	chr7	+	5579	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGACTGATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	57240909	57478550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ENSMUST00000039697.14-0	chr7	+	3319	9	FSM	ENSMUSG00000033676.14	ENSMUST00000039697.14	5579	9	11	2249	0	-1081	multi-exon	FALSE	canonical	3	23	junction_5	6.11223158919883	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGTGAGGGACAGTTAC	NA	False	NA	NA	False	AATAAA	-17	NA	57240920	57476301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_57241104_57241228_57241321_57241518_57241587_57415171_57415393_57438613_57438697_57442239_57442378_57461801_57461955_57466022_57466268_57474165
ENSMUST00000039720.11	chrX	+	2258	11	FSM	ENSMUSG00000041658.13	ENSMUST00000039720.11	2258	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	30.0765689532566	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3176	False	NA	NA	False	AATAAA	-17	NA	151922976	151954939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ENSMUST00000039725.12	chr1	+	2838	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	213	4745	0	0	multi-exon	FALSE	canonical	3	208	junction_2	66.5922714152693	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ENSMUST00000039729.5	chr6	+	2436	3	FSM	ENSMUSG00000040370.14	ENSMUST00000039729.5	2436	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	153.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	NA	False	NA	NA	False	AAAACA	-33	NA	145156881	145162665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145156979_145160247_145160998_145161076
ENSMUST00000039733.10	chr16	+	4521	13	FSM	ENSMUSG00000022807.10	ENSMUST00000039733.10	4521	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005440	33063682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ENSMUST00000039734.12	chr17	+	4779	15	FSM	ENSMUSG00000015127.15	ENSMUST00000039734.12	4779	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	11.8347464903054	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25407370	25453417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25448212_25448441_25449180_25449384_25449494_25449750_25450685
ENSMUST00000039742.8	chr9	+	5110	5	FSM	ENSMUSG00000035878.14	ENSMUST00000039742.8	5110	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.29903810567666	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTTGGTCTTTTTTTC	NA	False	NA	13	True	ATTAAA	-26	NA	54824566	54857208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54825143_54827757_54828109_54829478_54829619_54844422_54844607_54853349
ENSMUST00000039758.6	chr19	-	550	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	12296	junction_1	0	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCATGTCCTTCTGCAC	7366	False	NA	NA	False	AATAAA	-26	NA	7194981	7192517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7192850_7194763
ENSMUST00000039758.6-0	chr19	-	477	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	73	0	0	0	multi-exon	FALSE	canonical	3	12296	junction_1	0	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCATGTCCTTCTGCAC	7439	False	NA	NA	False	AATAAA	-26	NA	7194908	7192517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7192850_7194763
ENSMUST00000039763.14	chr10	-	1557	8	FSM	ENSMUSG00000040006.14	ENSMUST00000039763.14	1557	8	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	111.32321026119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTATTTTTAATTTTT	7463	False	NA	-1	True	AATAAA	-17	NA	7656681	7643710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7644350_7646120_7646285_7649061_7649193_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUST00000039769.13	chr15	-	4919	7	FSM	ENSMUSG00000060429.13	ENSMUST00000039769.13	4919	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	17.2916164657906	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAGGCTTATAATTTTA	NA	False	NA	2	True	AATAAA	-21	NA	55770345	55499783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55612583_55612792_55655429_55655647_55769419
ENSMUST00000039782.14	chr2	-	10515	37	FSM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_8	18.6792285774042	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGGAAGTTCAAAA	NA	False	NA	-23	True	AATAAA	-24	NA	160950942	160788897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ENSMUST00000039784.12	chr9	+	1762	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	0	0	0	0	multi-exon	TRUE	canonical	3	245	junction_2	23.8777880116768	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7728	False	NA	28	True	AGTAAA	-19	NA	119170359	119179365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ENSMUST00000039796.14	chr10	-	2875	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	83	542	0	0	multi-exon	FALSE	canonical	3	66	junction_3	9.3893556754444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTGGTAGCACCCTTT	NA	False	NA	-13	True	AATAAA	-11	NA	75353132	75342658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
ENSMUST00000039798.16	chr9	+	3382	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	13.43515542748	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387010	22799576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUST00000039803.7	chr14	+	2139	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_2	40.200862863874	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	8886	False	NA	16	True	AATAAA	-16	NA	122116031	122258446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUST00000039810.8	chr10	-	5992	25	FSM	ENSMUSG00000034667.9	ENSMUST00000039810.8	5992	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	297.787649802674	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462221	121423284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449566_121450895_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ENSMUST00000039818.10	chr4	+	3382	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_3	22.7807876447301	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGATCGTGTGTGTC	NA	False	NA	26	True	NA	NA	NA	139350176	139377001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ENSMUST00000039855.9	chr16	+	10847	21	FSM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	24.9785407900462	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGAGACTATCTGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	36706495	36753447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ENSMUST00000039867.10	chr1	+	8361	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCCAGGTTCTTTTCA	NA	False	NA	NA	False	AATAAA	-22	NA	139350119	139380743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ENSMUST00000039867.10-0	chr1	+	3449	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	0	4912	0	-1090	multi-exon	FALSE	canonical	3	10	junction_1	14.624978632463	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGAGTTTAGAAACTT	NA	False	NA	NA	False	ATTAAA	-19	NA	139350119	139375831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ENSMUST00000039881.4	chr7	+	3610	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	22.1664566531058	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTTTGTTTAATTAAT	NA	False	NA	38	True	AATAAA	-43	NA	82297848	82427060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ENSMUST00000039887.4	chrX	-	3886	17	FSM	ENSMUSG00000034607.7	ENSMUST00000039887.4	3886	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	3.09989919190931	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTATTGTCTTTGTGA	NA	False	NA	NA	False	AATAAA	-11	NA	111608348	111548127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_111550139_111552674_111552790_111554029_111554113_111554943_111555073_111556408_111556529_111556815_111556969_111557756_111557871_111558714_111558808_111565785_111565861_111567148_111567177_111571447_111571579_111573845_111574020_111578730_111578833_111587067_111587149_111593090_111593166_111607866_111608205_111608284
ENSMUST00000039892.9	chrX	-	2648	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATTTCTCTATTTC	NA	False	NA	-7	True	NA	NA	NA	8042420	8020710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ENSMUST00000039894.13	chr13	-	1844	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	17.0705109399221	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTTCTCTGCCCTTTC	NA	False	NA	-5	True	AATAAA	-14	NA	14214223	14172536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUST00000039900.4	chr11	-	918	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGTCTTTAATTTG	NA	False	NA	-1	True	AATAAA	-23	NA	29465033	29462875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29463677_29464916
ENSMUST00000039913.9	chr6	-	3651	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	0	0	0	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGGTCTGTTCAGTGT	NA	False	NA	NA	False	AATAAA	-22	NA	127086513	127062078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ENSMUST00000039913.9-1	chr6	-	2676	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	0	975	0	-975	multi-exon	FALSE	canonical	3	974	junction_4	62.3903838744401	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACACAATGGTTAGG	NA	False	NA	-27	True	ATTAAA	-9	NA	127086513	127063053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ENSMUST00000039922.13	chr19	+	4522	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	14.4473967456865	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGTGCTTCTTTCT	NA	False	NA	19	True	ATTAAA	-19	NA	46385334	46477243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ENSMUST00000039928.7	chr12	+	6439	29	FSM	ENSMUSG00000060716.8	ENSMUST00000039928.7	6439	29	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_6	14.4205688557161	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTTGTGGATATTTA	6125	False	NA	12	True	AATAAA	-24	NA	79075936	79128429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_79076195_79087265_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111350_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ENSMUST00000039939.7	chr4	-	3200	3	FSM	ENSMUSG00000040842.18	ENSMUST00000039939.7	3200	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTCCTGTCTCAT	NA	False	NA	0	True	AATACA	-31	NA	140867086	140840311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140843176_140845837_140846090_140867002
ENSMUST00000039939.7-0	chr4	-	879	3	FSM	ENSMUSG00000040842.18	ENSMUST00000039939.7	3200	3	9	2312	0	1254	multi-exon	FALSE	canonical	3	50	junction_2	204	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	-19	True	NA	NA	NA	140867077	140842623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140843176_140845837_140846090_140867002
ENSMUST00000039949.5	chr11	-	2444	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_8	32.4422563950167	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4403	False	NA	-5	True	AATAAA	-18	NA	94544790	94535821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
ENSMUST00000039991.14	chr5	-	3330	14	FSM	ENSMUSG00000037344.15	ENSMUST00000039991.14	3330	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.75307437100782	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGTGGAGCACTGCT	6501	False	NA	0	True	AATAAA	-15	NA	137331859	137312819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
ENSMUST00000039998.11	chr7	+	1946	6	FSM	ENSMUSG00000037463.15	ENSMUST00000039998.11	1946	6	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	20.7460839678239	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCATATCTTTTTCTT	8845	False	NA	NA	False	AATAAA	-19	NA	28392273	28398763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28392398_28392694_28393076_28394158_28394268_28394430_28394527_28396064_28396201_28397663
ENSMUST00000040005.13	chr2	-	1228	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	32.7210431781547	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATGATTTGATCCAAAA	8875	False	NA	-7	True	ATTAAA	-20	NA	93841075	93810981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ENSMUST00000040008.4	chr4	+	3600	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTATTGCTATTTCCC	7	False	NA	NA	False	AATAAA	-17	NA	41135742	41193380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ENSMUST00000040008.4-0	chr4	+	2067	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	-234	1767	-234	577	multi-exon	FALSE	canonical	3	428	junction_4	37.5857353260516	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCGAGCACTTGGTTGCT	-5	True	NA	29	True	AATAAA	-18	NA	41135508	41191613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ENSMUST00000040010.10	chrX	-	2792	7	FSM	ENSMUSG00000031167.17	ENSMUST00000040010.10	2792	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	443.550604653955	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGTGTGTTACACGTA	6561	False	NA	-3	True	ATTAAA	-16	NA	8011936	8005216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8007448_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000040017.8	chr6	+	3710	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	31.0917065288484	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAAACTTTTTTCTTTT	-18	True	NA	NA	False	AATAAA	-24	NA	8209221	8236274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ENSMUST00000040021.12	chr9	-	5346	25	FSM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_24	14.8742413438654	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTCACCTACTGCTGC	NA	False	NA	-3	True	AATAAA	-21	NA	110237281	110214149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ENSMUST00000040042.11	chr2	-	1150	7	FSM	ENSMUSG00000015083.12	ENSMUST00000040042.11	1150	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	2.38047614284762	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTCGTTTTTTGTC	NA	False	NA	-1	True	ATTAAA	-19	NA	25390625	25388662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25388836_25388916_25388956_25389025_25389128_25389409_25389518_25389600_25389672_25389850_25389988_25390105
ENSMUST00000040090.16	chr12	+	1183	11	FSM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	19	1785	0	-1785	multi-exon	FALSE	canonical	3	215	junction_4	16.265300489078	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGCTCTATGATGATTC	NA	False	NA	10	True	AATAAA	-19	NA	52144538	52357742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
ENSMUST00000040117.15	chr13	+	3328	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_13	19.2596363867546	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5494	False	NA	8	True	AATAAA	-20	NA	51805732	51838080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ENSMUST00000040131.13	chr14	+	4235	9	FSM	ENSMUSG00000036461.17	ENSMUST00000040131.13	4235	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	6.51440711039769	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTGTTTGTAATTCT	NA	False	NA	NA	False	ATTAAA	-39	NA	79718633	79819934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_79719078_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUST00000040135.9	chr10	+	1286	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_2	84.4680835751418	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAATGTTGGCTTGCTGCT	NA	False	NA	20	True	AATAAA	-20	NA	7543266	7554645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ENSMUST00000040148.11	chr3	-	2599	19	FSM	ENSMUSG00000037325.11	ENSMUST00000040148.11	2599	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	9.57507695872112	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTCTTTATATATT	NA	False	NA	NA	False	ATTAAA	-21	NA	36667538	36627290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664501_36664710_36664778_36666160_36666227_36667398
ENSMUST00000040154.9	chr5	-	571	3	FSM	ENSMUSG00000041697.10	ENSMUST00000040154.10	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	7177	junction_2	62.5	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACGGTACGATTTTAT	4854	False	NA	-26	True	AATAAA	-26	NA	115487040	115483700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115483986_115486623_115486767_115486897
ENSMUST00000040159.6	chr6	+	6092	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCATCTGTGTATTTT	9	True	NA	16	True	AATAAA	-17	NA	7844841	7875687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ENSMUST00000040159.6-1	chr6	+	2525	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	-73	3640	-73	-3640	multi-exon	FALSE	canonical	3	122	junction_1	4.89897948556636	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTATTTGGTACCT	-16	True	NA	9	True	ATTAAA	-22	NA	7844768	7872047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ENSMUST00000040166.14	chr4	-	3295	17	FSM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	14.4566971936885	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTGGGTTTTGTGGT	31	False	NA	NA	False	TATAAA	-21	NA	59438633	59314682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ENSMUST00000040167.11	chr11	-	1949	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_6	119.767367100652	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	-12	True	AATAAA	-18	NA	40583601	40570140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUST00000040177.7	chr17	+	976	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTGCTAATGGTACC	NA	False	NA	17	True	AATAAA	-17	NA	37269483	37276514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37269595_37275248_37275325_37275725
ENSMUST00000040179.14	chr12	+	5081	34	FSM	ENSMUSG00000012609.20	ENSMUST00000040179.14	5081	34	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_33	8.97020883060403	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTTTTTCTATT	NA	False	NA	6	True	AATAAA	-16	NA	85871483	86100534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
ENSMUST00000040182.13	chr11	+	9376	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_31	11.5379300285811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGTTACAGTCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	29323657	29460808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUST00000040188.16	chr18	-	1163	7	FSM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	0	1467	0	-287	multi-exon	FALSE	canonical	3	11	junction_6	177.375699826354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGTACTGCCTTTAGGA	6765	False	NA	-8	True	AGTAAA	-27	NA	74340850	74329836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340600
ENSMUST00000040202.15	chr7	-	3853	23	FSM	ENSMUSG00000032637.16	ENSMUST00000040202.15	3853	23	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	278.170751413855	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9414	False	NA	0	True	NA	NA	NA	126102609	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ENSMUST00000040213.13	chr5	+	3044	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_10	31.6406208676266	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACATGTTCCCATGCTT	4928	False	NA	NA	False	AATAAA	-17	NA	130285875	130370404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUST00000040218.13	chr8	+	1899	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	19	1653	0	-107	multi-exon	TRUE	canonical	3	53	junction_4	8.56504524214554	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACATTGAGAATATAAAAA	NA	False	NA	5	True	AATAAA	-18	NA	57004143	57045321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
ENSMUST00000040219.13	chr10	-	4572	22	FSM	ENSMUSG00000039089.16	ENSMUST00000040219.13	4572	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_21	7.32838422979453	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTTTTATATATGTA	NA	False	NA	-11	True	AATAAA	-12	NA	26249952	26150368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26249696
ENSMUST00000040234.9	chr6	+	2106	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	38.6343314973604	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTCCGACCGGCCTCCA	NA	False	NA	NA	False	AATGAA	-30	NA	115521624	115555589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUST00000040241.15	chr8	-	6612	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_11	90.8713558047041	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGGTATTTTGTCTGC	NA	False	NA	-5	True	AATAAA	-17	NA	111754396	111729819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ENSMUST00000040248.9	chr16	-	3282	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_3	29.6569490345649	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1947	False	NA	0	True	AATAAA	-18	NA	15964715	15707087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ENSMUST00000040254.16	chr8	+	4780	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	0	0	0	0	multi-exon	TRUE	canonical	3	268	junction_16	54.5128121057194	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUST00000040260.11	chr3	+	2377	17	FSM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	82.2666918852946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116653112	116697127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_116653284_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ENSMUST00000040261.7	chr19	+	1228	11	FSM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	10.4383906805599	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTCTGGGTCTGGC	8532	False	NA	6	True	AATAAA	-16	NA	7034177	7175422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066_7175102_7175277
ENSMUST00000040270.6	chr19	-	2757	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_3	19.222122671547	553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGACCTCTTTCTGT	NA	False	NA	-2	True	AATAAA	-19	NA	46384186	46365249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ENSMUST00000040271.12	chr4	-	3893	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_5	49.639648211447	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914423	133857168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ENSMUST00000040273.14	chr12	+	4147	33	FSM	ENSMUSG00000012609.20	ENSMUST00000040273.14	4147	33	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_32	9.07864940395872	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTGACGGAGGCTAAGC	NA	False	NA	NA	False	NA	NA	NA	85871742	86099982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ENSMUST00000040280.14	chr17	-	3362	10	FSM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	5.45916377623922	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGATTTTTAATTGTTT	NA	False	NA	-7	True	AATAAA	-16	NA	57366863	57350710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57352664_57354185_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ENSMUST00000040284.6	chr18	+	979	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	315	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	False	NA	26	True	ATTAAA	-17	NA	75138938	75143004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75139086_75141721_75141898_75142348
ENSMUST00000040307.6	chr10	-	1994	4	FSM	ENSMUSG00000040502.6	ENSMUST00000040307.6	3037	4	0	1043	0	-1043	multi-exon	TRUE	canonical	3	10	junction_3	2.16024689946929	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGCGTGGGGCCTCCTTTC	9919	False	NA	-5	True	CATAAA	-13	NA	126896053	126891922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_126892781_126893300_126893494_126894088_126894245_126895266
ENSMUST00000040308.14	chr5	-	2530	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTACTAGGACCCCC	NA	False	NA	60	True	ATTAAA	-14	NA	121974913	121955278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ENSMUST00000040308.14-0	chr5	-	4267	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	-9	-1728	0	0	multi-exon	FALSE	canonical	3	25	junction_7	11.8252583351856	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAACCATGATCTCTGC	NA	False	NA	-20	True	ATTAAA	-13	NA	121974922	121953550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ENSMUST00000040312.7	chr2	-	2026	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_3	7.71722460186015	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185952	152179341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
ENSMUST00000040313.6	chr15	-	1276	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTGTCGTTTCTTTGCT	NA	False	NA	0	True	ATTAAA	-19	NA	99372611	99367959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99368961_99372336
ENSMUST00000040314.12	chr2	-	1599	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	0	0	0	0	multi-exon	FALSE	canonical	3	1239	junction_6	93.4948621914506	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCTCTGGTTGTTTCT	NA	False	NA	-24	True	TATAAA	-18	NA	11608073	11590247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ENSMUST00000040320.10	chr15	+	3099	16	FSM	ENSMUSG00000033039.11	ENSMUST00000040320.10	6712	16	0	3613	0	0	multi-exon	FALSE	canonical	3	16	junction_2	11.2514690398879	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCCTGTGTCCCAACCA	6031	False	NA	NA	False	NA	NA	NA	78993163	79017487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ENSMUST00000040321.13	chr3	+	4025	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTCAGCTAATGTTAAT	NA	False	NA	NA	False	AATAAA	-22	NA	137849208	137865582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ENSMUST00000040321.13-0	chr3	+	2460	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	21	1544	0	-1541	multi-exon	FALSE	canonical	3	147	junction_7	16.9609395196067	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCTAAAATTCAGGTTT	NA	False	NA	4	True	AATAAA	-19	NA	137849229	137864038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ENSMUST00000040324.14	chr2	+	5466	3	FSM	ENSMUSG00000035829.14	ENSMUST00000040324.14	5466	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTTTGTTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	28337952	28345520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28337995_28338703_28338921_28340313
ENSMUST00000040330.15	chr8	-	1690	11	FSM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	43.9777216326631	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003892	56984556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003579
ENSMUST00000040336.12	chr13	-	6251	11	FSM	ENSMUSG00000038267.16	ENSMUST00000040336.12	6251	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.3706990134141	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGATTTTGTGTCACT	NA	False	NA	14	True	AATAAA	-26	NA	34529165	34363140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34367295_34376138_34376263_34377231_34377256_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140_34489245_34528141
ENSMUST00000040340.16	chr13	-	5122	26	FSM	ENSMUSG00000041685.17	ENSMUST00000040340.16	5122	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	64.1266746370027	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGACTTTGTGCCTTTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	98951957	98859910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891764_98892075_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ENSMUST00000040344.7	chr10	+	3855	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	13.2731878157773	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCAATGTGTCCTTTGT	NA	False	NA	4	True	ATTAAA	-16	NA	121200994	121233150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ENSMUST00000040361.8	chr6	+	1789	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	1.24721912892465	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCTCTGCTCAGTT	6204	False	NA	27	True	AATAAA	-35	NA	48514548	48518735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
ENSMUST00000040372.14	chr19	+	396	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	204	6	0	0	multi-exon	FALSE	canonical	3	2797	junction_1	495.826806679734	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4181	False	NA	27	True	AATAAA	-16	NA	10181581	10185182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
ENSMUST00000040381.15	chr2	-	3179	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	19.1790702249582	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAATCTTTCTTGG	2982	False	NA	-6	True	ATTAAA	-15	NA	164876787	164842276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ENSMUST00000040383.9	chr8	-	3471	29	FSM	ENSMUSG00000036686.17	ENSMUST00000040383.9	3471	29	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_17	12.7601500215095	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTCTTTTTGTCCTTG	NA	False	NA	-1	True	AATGAA	-24	NA	84874565	84859456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ENSMUST00000040402.14	chr17	-	1599	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_2	5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGTGTTAAATACAGGC	NA	False	NA	NA	False	AATAAA	-15	NA	37262605	37259247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_37260447_37260768_37260878_37262314
ENSMUST00000040402.14-0	chr17	-	665	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	0	934	0	0	multi-exon	FALSE	canonical	3	708	junction_2	5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGCCTCCGTTCTCCT	NA	False	NA	-15	True	AATATA	-23	NA	37262605	37260181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_37260447_37260768_37260878_37262314
ENSMUST00000040416.8	chr8	-	2547	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_8	46.4642402265948	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGTTTGTGTACACTT	7686	False	NA	-28	True	ATTAAA	-10	NA	111724432	111701627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ENSMUST00000040421.11	chr5	+	2037	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_4	23.5442845152137	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGATGTCACTTTTTG	NA	False	NA	21	True	AATAAA	-19	NA	115417724	115435031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUST00000040428.4	chr11	-	611	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_2	4	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTGTCTGTGCTTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	70130668	70128949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70129297_70129763_70129841_70130481
ENSMUST00000040430.8	chr11	-	2766	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	0	0	0	0	multi-exon	TRUE	canonical	3	320	junction_5	13.7462722219517	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGACCAGATGTTGTAT	NA	False	NA	-11	True	AATAAA	-15	NA	101357056	101349570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ENSMUST00000040434.9	chr17	+	1164	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTGGTTTGGCCTTCC	5307	False	NA	21	True	ATTAAA	-21	NA	47201609	47202773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47201600_47202800
ENSMUST00000040440.7	chr17	-	1205	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	0	0	0	0	multi-exon	FALSE	canonical	3	6557	junction_1	335.908082665482	3102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754363	87740839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUST00000040445.9	chr8	+	1819	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTTCGACTTTTTT	NA	False	NA	12	True	ATTAAA	-19	NA	106581763	106583582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106581800_106583600
ENSMUST00000040448.13	chr11	-	5534	18	FSM	ENSMUSG00000034354.18	ENSMUST00000040448.13	5534	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	53.6004054108513	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGCGAACGAGTTCTA	1321	False	NA	-19	True	AATAAA	-20	NA	4496268	4430874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4496188
ENSMUST00000040454.5	chr10	+	2744	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCATGTAAGTTAATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	111134539	111137588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111134769_111135073
ENSMUST00000040455.5	chr19	+	6194	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	13.1583759310508	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATGTGACTTATTTAAA	NA	False	NA	11	True	NA	NA	NA	44551288	44564713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ENSMUST00000040461.4	chr12	+	3435	10	FSM	ENSMUSG00000034258.5	ENSMUST00000040461.4	3435	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	3.8522079607466	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCCTCATCATTTAGTG	NA	False	NA	NA	False	AATAAA	-14	NA	85793312	85860359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85794364_85829730_85829873_85832861_85833003_85842948_85843017_85845271_85845376_85849908_85850020_85851141_85851248_85851369_85851482_85851969_85852026_85858815
ENSMUST00000040477.4	chr5	+	1665	2	FSM	ENSMUSG00000035946.8	ENSMUST00000040477.4	1665	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGTCCTTATCCCCC	NA	False	NA	NA	False	AATAAA	-30	NA	75236261	75238554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_75236999_75237626
ENSMUST00000040481.4	chr8	-	3333	12	FSM	ENSMUSG00000036534.7	ENSMUST00000040481.4	3333	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	95.4970468151409	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580167	96562547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580099
ENSMUST00000040484.6	chr8	-	1443	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_3	87.9982244139051	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGGTGTGGTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	117720276	117708548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
ENSMUST00000040487.4	chr11	-	2075	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	0	2068	0	-2068	multi-exon	FALSE	canonical	3	12	junction_3	10.3319891598859	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTATCCAAGGCCACT	3251	False	NA	NA	False	NA	NA	NA	94440025	94432691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
ENSMUST00000040506.8	chr18	-	3344	21	FSM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_18	10.452152888281	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTTTTTCTTTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	34639876	34575403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ENSMUST00000040514.8	chr8	-	6323	2	FSM	ENSMUSG00000038894.8	ENSMUST00000040514.8	6323	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGATTGGAGGACATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	11058458	11034680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11037015_11054469
ENSMUST00000040518.6	chr15	+	1942	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_4	129.272537257102	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTCTCATTATTAT	NA	False	NA	30	True	AGTAAA	-20	NA	78959378	78978605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ENSMUST00000040519.12	chr12	+	1065	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_3	10.0343161201947	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGCAAGTTGAGAATAA	1541	False	NA	NA	False	TTTAAA	-1	NA	111679694	111700654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ENSMUST00000040531.9	chr7	-	4349	13	FSM	ENSMUSG00000109336.2	ENSMUST00000040531.9	4349	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	157.079310293311	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	4637	False	NA	-35	True	NA	NA	NA	28297569	28098973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28297530
ENSMUST00000040538.10	chr1	+	1948	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	16.3434218576322	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCCCCTTTTTTGGT	NA	False	NA	12	True	AATAAA	-19	NA	179495774	179514754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUST00000040555.15	chr5	-	3106	17	FSM	ENSMUSG00000041740.17	ENSMUST00000040555.15	3106	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	338.888480689076	2746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410951	115379828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUST00000040560.11	chr10	-	1206	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_5	79.6728310027954	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGTGTGAGTGTGTGT	NA	False	NA	-3	True	AATAAA	-24	NA	126866709	126858200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ENSMUST00000040561.6	chr11	+	3223	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	4.27200187265877	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCTGCACTCTCTAAG	NA	False	NA	35	True	AATAAA	-39	NA	101315910	101326499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
ENSMUST00000040576.10	chr5	+	5068	4	FSM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0.816496580927726	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGTCGCTCTGATCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	91665473	91774753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_91665817_91741676_91742361_91760856_91760936_91770791
ENSMUST00000040577.5	chr11	+	1510	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	6.53197264742181	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATATGAGTGTTTGCAGG	550	False	NA	23	True	ATTAAA	-31	NA	76134540	76141445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
ENSMUST00000040580.7	chr10	-	3288	8	FSM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_5	4.14039335605413	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGACTGAGTCCTTGG	NA	False	NA	1	True	AATAAA	-15	NA	78427798	78420336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
ENSMUST00000040583.7	chr12	-	7763	36	FSM	ENSMUSG00000035181.7	ENSMUST00000040583.7	7763	36	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_35	10.655036176305	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTGTATTTTGAAGTG	9999	False	NA	0	True	AATAAA	-16	NA	52018104	51922653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ENSMUST00000040603.14	chr3	-	5128	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	-89	4586	-89	-1534	multi-exon	TRUE	canonical	3	13	junction_28	10.2172903022423	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	116601904	116538233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ENSMUST00000040616.9	chr5	+	4291	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1.88561808316413	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCCTCAAGAGGCAGAG	1855	False	NA	NA	False	NA	NA	NA	130173701	130184647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
ENSMUST00000040624.7	chr17	-	6575	11	FSM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	38.4364410423234	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47142339	47109045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876
ENSMUST00000040636.9	chr7	-	2470	4	FSM	ENSMUSG00000040364.9	ENSMUST00000040636.9	2470	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	5.43650214343336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCCAGCAATTGAGT	NA	False	NA	NA	False	AATAAA	-21	NA	45343826	45327109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45328949_45333603_45333716_45334689_45334780_45343397
ENSMUST00000040638.15	chr2	-	2587	9	FSM	ENSMUSG00000038718.16	ENSMUST00000040638.15	2587	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	7.22733526273688	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGGGTTCTTGTGATGC	832	False	NA	NA	False	NA	NA	NA	34262056	34061734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34062986_34065876_34065967_34066760_34066874_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
ENSMUST00000040656.8	chr13	+	1253	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	28.0356915377524	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	15	True	AATAAA	-17	NA	34221579	34258057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
ENSMUST00000040668.9	chr2	+	2805	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	0	0	0	0	multi-exon	TRUE	canonical	3	166	junction_6	20.3809866146027	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGGTTGAAGGTTTGA	NA	False	NA	10	True	ATTAAA	-16	NA	179761098	179804473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ENSMUST00000040676.11	chr15	-	1904	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	6.03391773769796	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTTTTTGTGTTTTTG	NA	False	NA	0	True	NA	NA	NA	78947085	78937293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
ENSMUST00000040677.6	chr9	+	2723	8	FSM	ENSMUSG00000036611.6	ENSMUST00000040677.6	2723	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	5.11101251999952	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGTGTGGAATGGTTT	NA	False	NA	15	True	AATAAA	-23	NA	25392842	25515406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_25393193_25393576_25394616_25458847_25458900_25493187_25493299_25497957_25498093_25500730_25500870_25505856_25506052_25514704
ENSMUST00000040687.12	chr11	+	1523	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	3.09120616516523	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCTTTGTCTGGAAACC	4208	False	NA	NA	False	AGTAAA	-16	NA	73067908	73072978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
ENSMUST00000040689.15	chr1	-	3764	16	FSM	ENSMUSG00000033124.17	ENSMUST00000040689.15	3764	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	10.0013332444563	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTGTGGCATCTTTT	NA	False	NA	-2	True	AATAAA	-13	NA	75168567	75157509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167522_75168467
ENSMUST00000040700.9	chr14	-	7803	54	FSM	ENSMUSG00000025558.20	ENSMUST00000040700.9	7803	54	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_53	14.8226491949409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTTTGTTGTTTGGC	NA	False	NA	-32	True	AATAAA	-3	NA	121935829	121779557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121814758_121814837_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_121935605
ENSMUST00000040706.9	chr1	+	4709	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	8.09691299199886	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCCGAGAATTTATTTG	NA	False	NA	NA	False	TTTAAA	-17	NA	179373934	179455043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ENSMUST00000040717.7	chr9	+	4858	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_12	27.7337969778696	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780110	122847798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ENSMUST00000040718.6	chr10	+	3006	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	7.54718490564528	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTTGTAATTGAAT	NA	False	NA	9	True	AATAAA	-18	NA	42554911	42578455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
ENSMUST00000040721.9	chr5	+	2050	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	10.899541274751	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAATGGTCCCGTTTTCAG	NA	False	NA	17	True	AATAAA	-18	NA	130108210	130164570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
ENSMUST00000040729.9	chr17	+	4071	25	FSM	ENSMUSG00000036636.11	ENSMUST00000040729.9	4071	25	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_8	12.081896466293	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATTTTTATTTTGACT	NA	False	NA	20	True	NA	NA	NA	25352364	25381078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ENSMUST00000040735.12	chr17	-	1496	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_8	20.5156038175824	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382740	24374806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ENSMUST00000040750.4	chr11	+	3798	3	FSM	ENSMUSG00000034394.15	ENSMUST00000040750.4	3798	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTGGAGTGCATTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	4217094	4222514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4217120_4218183_4218366_4218923
ENSMUST00000040766.9	chr12	-	1482	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_2	34.3110769285955	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTCCTTGTGTATGTGT	8464	False	NA	-5	True	ATTAAA	-20	NA	85421621	85389561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ENSMUST00000040776.6	chr8	-	1814	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	25.0593739391514	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAAAGTTAGCGATATT	NA	False	NA	NA	False	ATTAAA	-12	NA	106578686	106571308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ENSMUST00000040787.13	chr3	+	3903	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	30.2143959433615	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	False	NA	15	True	AATAAA	-23	NA	157653050	157713671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUST00000040789.6	chr17	+	2059	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	0	0	0	0	multi-exon	TRUE	canonical	3	226	junction_1	6.47216261298253	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAATAACTATTGCCTC	NA	False	NA	-2	True	AATATA	-14	NA	79359334	79397807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ENSMUST00000040789.6-0	chr17	+	1547	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	355	157	73	0	multi-exon	FALSE	canonical	3	226	junction_1	6.47216261298253	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAATTTATTTTCATGT	NA	False	NA	11	True	ATTAAA	-20	NA	79359689	79397650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ENSMUST00000040824.2	chr3	+	404	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTGTAGTTTTGAGT	6777	False	NA	17	True	ATTAAA	-18	NA	89173858	89174384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89173914_89174035
ENSMUST00000040826.6-1	chr6	+	1000	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	3	3320	0	-3320	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTATGTTGGGTGACC	-15	True	NA	8	True	AATAAA	-16	NA	6956006	7039659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_6956201_7038853
ENSMUST00000040828.7	chr17	+	1212	6	FSM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	17.3735431043872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTGATAATTGCTG	NA	False	NA	12	True	NA	NA	NA	34482182	34488393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34482380_34483734_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
ENSMUST00000040833.5	chr2	-	1873	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	65	352	65	-352	multi-exon	FALSE	canonical	3	287	junction_6	17.8672885463911	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTTTTACATGCTGG	NA	False	NA	-13	True	AATAAA	-13	NA	155571330	155543948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ENSMUST00000040835.9	chr6	-	3472	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATGCAGTACATGATCT	NA	False	NA	NA	False	NA	NA	NA	91450528	91439153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_91442296_91444664_91444764_91450297
ENSMUST00000040835.9-0	chr6	-	1367	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	0	2105	0	-2105	multi-exon	FALSE	canonical	3	1002	junction_1	28.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATGGCTTTTTTTT	NA	False	NA	-2	True	ATTAAA	-20	NA	91450528	91441258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_91442296_91444664_91444764_91450297
ENSMUST00000040844.16	chr7	+	4284	29	FSM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_17	26.9819242214835	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285668	35338651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ENSMUST00000040853.11	chr9	-	4647	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_10	22.0306486733564	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTTATTTATTTA	5572	False	NA	47	True	AATAAA	-29	NA	119151493	119067497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ENSMUST00000040860.3	chr18	+	1692	7	FSM	ENSMUSG00000036743.5	ENSMUST00000040860.3	1692	7	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_2	7.18795288428261	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGAGTGTCTCCTTCAA	NA	False	NA	10	True	NA	NA	NA	14839207	14895355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_14839390_14854223_14854351_14859560_14859686_14864035_14864159_14890338_14890459_14890678_14890742_14894403
ENSMUST00000040865.9	chr11	+	1633	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.67045259092421	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTAGTTACCGAGTCAA	NA	False	NA	5	True	AGTAAA	-23	NA	80701000	80712859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ENSMUST00000040872.13	chr2	+	3458	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_3	8.54837950981163	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAGAACCACGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	160730027	160747922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUST00000040873.12	chr5	-	3024	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	186.551382419291	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTATGTCCCTTCCCAA	8257	False	NA	-1	True	AGTAAA	-29	NA	137305936	137293965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUST00000040880.9	chr16	-	3280	3	FSM	ENSMUSG00000041205.9	ENSMUST00000040880.9	3280	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAATATTAATTATTCC	NA	False	NA	NA	False	AATAAA	-29	NA	20060108	20052052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20054790_20055336_20055455_20059683
ENSMUST00000040881.14	chr16	+	1779	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	16.217019933921	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGCTGCTATTATTAT	3094	False	NA	7	True	AATACA	-17	NA	3726688	3759011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ENSMUST00000040888.12	chr3	+	520	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	468	184	0	0	multi-exon	FALSE	canonical	3	1428	junction_1	178.055293378209	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTCTGTGAACTGTG	7591	False	NA	20	True	AATAAA	-14	NA	89153740	89157029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ENSMUST00000040907.8	chr17	-	2224	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	27.3849867628232	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGCTTGTGTTTCCT	NA	False	NA	-4	True	NA	NA	NA	26309311	26300184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUST00000040912.9	chr9	-	4605	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_4	55.8021416884086	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7183	False	NA	-3	True	AATAAA	-20	NA	22300484	22243307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ENSMUST00000040915.15	chr2	+	6245	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	98.4826299525295	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGATTGTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	69553436	69584356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ENSMUST00000040915.15-0	chr2	+	2846	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	0	3399	0	1065	multi-exon	FALSE	canonical	3	35	junction_1	98.4826299525295	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTGGTGTAATACTG	NA	False	NA	NA	False	AATAAA	-21	NA	69553436	69580957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ENSMUST00000040917.14	chr9	+	499	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	10808	junction_3	618.277355956765	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTCCTCCCTCTGCTT	NA	False	NA	30	True	AATAAA	-14	NA	66853367	66856794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
ENSMUST00000040924.9	chr18	-	3098	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	289.216597034126	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTTCTTTAAATTAG	NA	False	NA	-13	True	AATAAA	-23	NA	14815971	14758679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUST00000040962.6	chr7	-	2298	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	2	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTTATTCTACT	NA	False	NA	2	True	ATTAAA	-29	NA	35255729	35246609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35247549_35250878_35251087_35254578
ENSMUST00000040962.6-0	chr7	-	1461	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	837	0	-273	0	multi-exon	FALSE	canonical	3	351	junction_1	2	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTTTATTCTACT	NA	False	NA	2	True	ATTAAA	-29	NA	35254892	35246609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35247549_35250878_35251087_35254578
ENSMUST00000040964.13	chr18	-	2734	10	FSM	ENSMUSG00000037013.18	ENSMUST00000040964.13	4153	10	-12	1431	0	0	multi-exon	FALSE	canonical	3	40	junction_6	374.482193942845	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815835	14758685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUST00000040967.9	chr5	-	2522	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	15.8394724940223	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGTGTTTCTCTCAT	2236	False	NA	-1	True	AATAAA	-20	NA	124170333	124142703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
ENSMUST00000040971.14	chr7	-	4498	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_9	14.761765552339	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGTTTCATTTTTCC	NA	False	NA	1	True	AATAAA	-23	NA	97827481	97770765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ENSMUST00000040972.4	chr13	-	4120	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCCCTTGATCATGA	NA	False	NA	-53	True	AATGAA	-15	NA	98399549	98383352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ENSMUST00000040972.4-0	chr13	-	2709	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	28	1383	0	-1383	multi-exon	FALSE	canonical	3	368	junction_4	38.6584042896525	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399521	98384735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ENSMUST00000040986.15	chr16	-	5257	19	FSM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_16	7.31732258934531	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTTTATTTACCTG	NA	False	NA	-35	True	AATAAA	-15	NA	32688721	32642097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ENSMUST00000040990.7	chr14	+	7054	45	FSM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_28	13.7905487757808	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTATGTGTGTGTGGTTT	9206	False	NA	26	True	AATAAA	-35	NA	79086491	79439750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ENSMUST00000040992.8	chr12	-	5386	22	FSM	ENSMUSG00000034290.10	ENSMUST00000040992.8	5386	22	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_16	12.716336556552	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGGGCTGTGTTTGAGTA	7957	False	NA	-3	True	AATAAA	-15	NA	85386136	85346287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ENSMUST00000040999.14	chr1	+	4606	35	FSM	ENSMUSG00000064294.13	ENSMUST00000040999.14	4606	35	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	6.33501009795379	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAACAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	58152294	58239857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58152472_58154029_58154088_58157756_58157854_58158639_58158749_58160136_58160264_58164176_58164239_58166785_58166867_58177374_58177456_58180509_58180655_58181828_58181922_58185582_58185735_58186352_58186447_58189453_58189564_58191712_58191898_58192179_58192343_58192638_58192732_58197359_58197530_58198063_58198179_58198795_58198919_58202507_58202605_58204995_58205121_58206761_58206896_58208936_58209025_58209815_58209903_58210900_58211093_58211279_58211508_58215632_58215729_58216677_58216807_58218475_58218551_58219764_58219818_58222624_58222740_58225435_58225502_58227493_58227683_58233784_58233953_58239328
ENSMUST00000041003.8	chr17	-	1402	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.8414585839246	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAACCTAACAGCTCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	3608056	3569530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ENSMUST00000041005.6	chr9	+	632	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	6.73498329619309	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGAGTGCTTATCATTC	NA	False	NA	34	True	AATGAA	-20	NA	45314435	45321576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
ENSMUST00000041008.10	chr12	+	2613	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	27.7548298231568	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884187	76968186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ENSMUST00000041023.14	chr1	-	6247	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	0	0	0	0	multi-exon	TRUE	canonical	3	518	junction_15	35.6964730086209	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTCAGTTTCAGT	NA	False	NA	-4	True	AATAAA	-21	NA	135358237	135310049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ENSMUST00000041023.14-0	chr1	-	4045	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	41	2161	0	0	multi-exon	FALSE	canonical	3	518	junction_15	35.6964730086209	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358196	135312210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ENSMUST00000041029.6	chr9	-	2971	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	8.65383665716478	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTCTTTCTTACAAA	NA	False	NA	NA	False	AATAAA	-15	NA	63929341	63860357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
ENSMUST00000041045.14	chr3	+	1069	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	13832	junction_1	739.113320134335	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570247	137572683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ENSMUST00000041047.4	chr17	-	4708	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	558	6786	0	-1131	multi-exon	FALSE	canonical	3	25	junction_8	4.93557105021248	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGCTGAAAATAGCCT	NA	False	NA	NA	False	AATAAA	-12	NA	17844751	17748457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ENSMUST00000041048.6	chr5	-	3908	3	FSM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCTCTTGAGAAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	136199567	136176312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136179807_136190340_136190579_136199391
ENSMUST00000041053.11	chr18	+	1516	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_8	17.7325814376939	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912267	74939279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ENSMUST00000041055.9	chr12	-	7546	42	FSM	ENSMUSG00000041341.11	ENSMUST00000041055.9	7546	42	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	13.111882981186	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	NA	False	NA	2	True	AATAAA	-21	NA	105651470	105582394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602812_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ENSMUST00000041059.12	chr2	-	3204	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_12	37.6501520663235	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTTTGTCCATGATGT	NA	False	NA	7	True	ATTAAA	-42	NA	155534304	155476190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ENSMUST00000041065.14	chr11	-	5354	22	FSM	ENSMUSG00000035441.15	ENSMUST00000041065.14	5354	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.91683672973592	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAAGGTGTTCTGTTTC	NA	False	NA	1	True	AATAAA	-14	NA	80670851	80372951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_80375209_80448259_80448415_80477672_80477787_80483612_80483718_80484564_80484710_80492408_80492633_80528699_80528908_80531044_80531212_80548218_80548352_80553866_80553942_80557400_80557472_80561674_80561846_80565439_80565555_80565642_80565789_80566876_80567081_80567647_80567765_80570845_80570942_80573207_80573262_80575150_80575317_80576675_80576770_80583706_80583916_80670523
ENSMUST00000041093.6	chr6	-	7082	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCTGGTCTTTAAATC	NA	False	NA	0	True	AATAAA	-18	NA	37419081	37304189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ENSMUST00000041093.6-0	chr6	-	3215	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	0	3867	0	3170	multi-exon	FALSE	canonical	3	82	junction_10	9.34552529156102	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	NA	False	NA	NA	False	ATTAAA	-25	NA	37419081	37308056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ENSMUST00000041096.4	chrX	+	942	3	FSM	ENSMUSG00000039278.11	ENSMUST00000041096.4	2193	3	75	1176	75	-1176	multi-exon	FALSE	canonical	3	43	junction_1	26.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTTGTCTGAGCGCCC	NA	False	NA	4	True	AATAAA	-14	NA	7786135	7789473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7786284_7788286_7788754_7789146
ENSMUST00000041097.13	chr7	+	2081	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_4	89.4111814875522	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUST00000041099.5	chr2	-	2729	2	FSM	ENSMUSG00000034701.10	ENSMUST00000041099.5	2729	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCCTGTGCTTAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	79287095	79282864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_79285393_79286894
ENSMUST00000041100.4	chr5	+	1773	3	FSM	ENSMUSG00000039754.11	ENSMUST00000041100.4	1773	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	0.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATTTCTCCTTTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	136165007	136170466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136165149_136168191_136168390_136169032
ENSMUST00000041105.7	chr2	+	7874	23	FSM	ENSMUSG00000061186.16	ENSMUST00000041105.7	7874	23	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	8.61768314629387	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	4703	False	NA	3	True	AATAAA	-16	NA	10377260	10600064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_10377428_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
ENSMUST00000041110.12	chr17	+	4614	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_15	8.33807805830403	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590313	87689197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ENSMUST00000041111.10	chr6	-	478	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	0	994	0	-994	multi-exon	FALSE	canonical	3	3186	junction_2	110.5	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGGTTCAGATGTCT	-25	True	NA	-12	True	AATAAA	-14	NA	6578658	6558287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_6558492_6560407_6560502_6578478
ENSMUST00000041122.11	chr4	+	672	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	68.1762421962372	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGGGTTTTTTTTTG	-5	True	NA	30	True	ATTAAA	-23	NA	3938913	3943528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000041124.13	chr3	-	2562	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	0	11272	0	0	multi-exon	FALSE	canonical	3	267	junction_2	34.7697785440172	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTCTATGTCTGTTT	NA	False	NA	-15	True	NA	NA	NA	9675145	9503351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ENSMUST00000041126.9	chr2	+	4343	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	6.29603049547888	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTTCTGTTTATTGAG	NA	False	NA	18	True	ATTAAA	-19	NA	179684301	179711994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ENSMUST00000041138.3	chr18	-	4971	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	4.32049379893857	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTGTCCTGCGGTTCT	NA	False	NA	NA	False	NA	NA	NA	73887550	73868108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
ENSMUST00000041138.3-0	chr18	-	2476	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	0	2495	0	-2495	multi-exon	FALSE	canonical	3	22	junction_1	4.32049379893857	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGCTAGGAGTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	73887550	73870603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
ENSMUST00000041139.9	chr9	-	4733	8	FSM	ENSMUSG00000036943.10	ENSMUST00000041139.9	4733	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_5	12.9992150469455	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACTCTTAAGTGGATT	7751	False	NA	-1	True	AATAAA	-21	NA	66826969	66750945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
ENSMUST00000041160.13	chr4	+	1192	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	16.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTGTTTGGTGTCT	1876	False	NA	35	True	AATAAA	-35	NA	59035087	59041903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59035319_59039226_59039359_59041074
ENSMUST00000041190.17	chr15	-	1916	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_2	85.1129201923742	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTTTATTTTTTTTTA	NA	False	NA	1	True	AATAAA	-21	NA	99149842	99140697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ENSMUST00000041197.13	chr14	+	2401	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	11	True	AATAAA	-18	NA	54496688	54506621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUST00000041208.9	chr15	-	1811	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_7	35.3844912669692	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGTAACTCCGAGTG	NA	False	NA	-5	True	AATAAA	-25	NA	102259194	102246686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ENSMUST00000041213.12	chr1	-	2429	10	FSM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_9	47.8820567438857	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTGGCCTTTTCCTTC	9308	False	NA	-16	True	AATAAA	-14	NA	75119341	75112414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701_75119205_75119286
ENSMUST00000041218.6	chr11	-	2028	6	FSM	ENSMUSG00000038208.14	ENSMUST00000041218.6	2028	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.7621547844466	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	98282898	98279502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98282762
ENSMUST00000041231.14	chr11	+	6491	47	FSM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	0	0	0	0	multi-exon	TRUE	canonical	2	239	junction_13	60.0854464039772	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGATTGTTTTTTA	NA	False	NA	17	True	AATAAA	-19	NA	30721725	30830361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ENSMUST00000041240.4	chr1	-	1763	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGAGTCCGTCCTTCCTT	NA	False	NA	3	True	NA	NA	NA	135302975	135298794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ENSMUST00000041240.4-0	chr1	-	1204	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	160	399	0	-396	multi-exon	FALSE	canonical	3	26	junction_2	2.8613807855649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGAATCACTGGCCCC	NA	False	NA	-7	True	ATTAAA	-20	NA	135302815	135299193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ENSMUST00000041262.14	chr12	+	676	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	1.88561808316413	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTATGTTTTCTTTT	NA	False	NA	9	True	AATGAA	-3	NA	76812311	76829954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
ENSMUST00000041264.15	chr10	-	2035	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	52.6898683071254	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATGTTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	82077107	82060683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
ENSMUST00000041272.10	chr11	-	5154	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	0	814	0	-814	multi-exon	TRUE	canonical	3	46	junction_6	16.0020659823186	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCTGAATCTCAA	NA	False	NA	0	True	AGTAAA	-20	NA	103303513	103255914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ENSMUST00000041282.13	chr11	+	5632	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_12	47.8466359016781	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTTGTTGTTTTATT	1916	False	NA	13	True	AATAAA	-15	NA	87017902	87111509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ENSMUST00000041282.13-1	chr11	+	4432	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	0	1200	0	-1200	multi-exon	TRUE	canonical	3	377	junction_12	47.8466359016781	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	1916	False	NA	26	True	AATAAA	-16	NA	87017902	87110309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ENSMUST00000041284.10	chr4	+	7340	44	FSM	ENSMUSG00000061859.18	ENSMUST00000041284.10	7340	44	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_32	5.98203548240142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGTGTGTCTTTATT	NA	False	NA	NA	False	AATACA	-14	NA	98284027	98607840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ENSMUST00000041297.15	chr15	+	5425	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	12	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGATGATGGCTT	NA	False	NA	35	True	ATTAAA	-22	NA	88635862	88668719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_88636006_88638962_88639137_88663611
ENSMUST00000041314.17	chr18	+	1475	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	0	0	0	0	multi-exon	FALSE	canonical	3	2803	junction_2	114.719948860983	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	4640	False	NA	22	True	AATAAA	-16	NA	35731669	35750239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ENSMUST00000041316.15	chr12	-	1398	4	FSM	ENSMUSG00000041359.15	ENSMUST00000041316.15	1398	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	814.330945555238	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTCTTGGAATTATG	NA	False	NA	-2	True	AATAAA	-23	NA	105188996	105183008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_105183961_105184481_105184552_105184917_105185089_105188791
ENSMUST00000041317.3	chrX	-	5437	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	6.04648658313239	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTTAGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	141749724	141634141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
ENSMUST00000041331.4	chr19	-	4832	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	163.124001912655	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGCTTTTGTGTGTGGT	-4	True	NA	-5	True	AATAAA	-22	NA	44396148	44382893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ENSMUST00000041353.7	chr17	+	2326	3	FSM	ENSMUSG00000037089.12	ENSMUST00000224559.2	2326	3	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	19	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGGTTGGCA	NA	False	NA	8	True	ATTAAA	-18	NA	45874889	45878595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_45875700_45875850_45876006_45877234
ENSMUST00000041361.14	chr2	-	4587	28	FSM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	19.1818958999235	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753677	164733801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ENSMUST00000041361.14-0	chr2	-	4402	28	FSM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	185	0	185	0	multi-exon	TRUE	canonical	3	65	junction_13	19.1818958999235	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753492	164733801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ENSMUST00000041362.12	chr2	+	2867	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	7.24377127070024	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7264	False	NA	14	True	ATTAAA	-19	NA	131075986	131089945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ENSMUST00000041364.13	chr5	-	2702	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_10	61.2066102226557	1006	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGGCTGTGTGGTGTGTT	NA	False	NA	-5	True	AATAAA	-16	NA	34817492	34795879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUST00000041366.14	chr5	+	646	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9212	False	NA	30	True	AATAAA	-19	NA	136145484	136151801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
ENSMUST00000041366.14-0	chr5	+	575	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	71	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_2	77.5471182930453	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCAGTGTGTGGACTG	9283	False	NA	30	True	AATAAA	-19	NA	136145555	136151801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
ENSMUST00000041367.9	chr8	-	2312	13	FSM	ENSMUSG00000037103.9	ENSMUST00000041367.9	2312	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	56.6688112339289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTCCTGTTCTGT	9263	False	NA	-3	True	ACTAAA	-17	NA	84831391	84823700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84824138_84824251_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ENSMUST00000041370.11	chrX	-	3862	10	FSM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	53.4535681747934	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTCTGTGTATTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	161612450	161561914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
ENSMUST00000041374.8	chr4	-	4867	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_4	9.33742469849155	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAATCTATTCATTGTT	0	True	NA	-4	True	AATAAA	-25	NA	26346891	26324505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
ENSMUST00000041375.11	chr9	-	3552	16	FSM	ENSMUSG00000037112.17	ENSMUST00000041375.11	3552	16	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	12.14907403879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGGTACTCTTTTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	50920373	50804100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50804690_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ENSMUST00000041377.13	chr4	+	3463	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	7.08823359911026	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATCTTGTCTTACTTC	-7	True	NA	NA	False	ACTAAA	-18	NA	3678114	3791613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ENSMUST00000041382.7	chr8	-	3838	24	FSM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_23	12.3354193641104	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGAAAACTGTTTTTT	1243	False	NA	-7	True	AATAAA	-19	NA	111629091	111609094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ENSMUST00000041385.14	chr11	-	3512	16	FSM	ENSMUSG00000034255.19	ENSMUST00000041385.14	3512	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	5.71314274283428	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGGCGAATGTACTC	4343	False	NA	-3	True	NA	NA	NA	103235528	103222325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103235335
ENSMUST00000041400.6	chr8	-	5308	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553982	106494939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ENSMUST00000041400.6-0	chr8	-	5163	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	145	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553837	106494939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ENSMUST00000041415.5	chr15	+	3698	15	FSM	ENSMUSG00000037579.8	ENSMUST00000041415.5	3698	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.04520382468866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAACTCAGTACTTT	NA	False	NA	7	True	AATAAA	-8	NA	99122741	99140698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99122933_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
ENSMUST00000041416.8	chr10	+	2416	7	FSM	ENSMUSG00000037440.9	ENSMUST00000041416.8	2416	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.59861050777091	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGGCTCTCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	23770585	23781241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_23770990_23773190_23773322_23774305_23774499_23775291_23775584_23776482_23776842_23779283_23779455_23780375
ENSMUST00000041418.13	chr9	+	5909	33	FSM	ENSMUSG00000037286.16	ENSMUST00000041418.13	5909	33	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_30	76.7811355310502	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525665	100840597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
ENSMUST00000041438.7	chr10	+	2600	10	FSM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	20.085619202938	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	NA	False	NA	8	True	AATAAA	-15	NA	41763434	41784420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ENSMUST00000041447.5	chr1	-	4263	27	FSM	ENSMUSG00000032769.6	ENSMUST00000041447.5	4263	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.09712398157163	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTGGGGACAGCAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	14989086	14942871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_14943953_14944587_14944686_14946072_14946184_14950422_14950492_14951820_14952004_14952335_14952466_14954333_14954504_14955973_14956064_14957110_14957277_14957818_14957890_14959617_14959717_14960618_14960679_14961528_14961623_14963406_14963574_14966715_14966831_14968232_14968398_14968479_14968650_14969570_14969672_14970288_14970389_14972085_14972135_14973369_14973507_14974370_14974517_14974676_14974786_14976146_14976255_14980953_14981130_14982583_14982744_14988948
ENSMUST00000041466.14	chr5	+	2492	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	2120.04764097414	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTGTCTCAAAAAAAATTT	6005	False	NA	NA	False	AATAAA	-17	NA	129924563	129932464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
ENSMUST00000041477.15	chr9	-	2223	2	FSM	ENSMUSG00000037206.16	ENSMUST00000041477.15	2223	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTGATGCTCTGCT	NA	False	NA	NA	False	NA	NA	NA	58066504	58063550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58065514_58066244
ENSMUST00000041500.8	chr2	+	2812	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACAGTTTTGGTTGTG	NA	False	NA	31	True	NA	NA	NA	151947443	151953296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151947868_151950908
ENSMUST00000041551.9	chr9	+	2603	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	0	2691	0	1569	multi-exon	FALSE	canonical	3	211	junction_6	53.7134601610168	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9214	False	NA	NA	False	ATTAAA	-22	NA	63509941	63549179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ENSMUST00000041555.10	chr2	-	4998	10	FSM	ENSMUSG00000038740.10	ENSMUST00000041555.10	4998	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	24.5990063033268	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGTTTGCTGTTATTT	3749	False	NA	-1	True	AATAAA	-20	NA	33777958	33619964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548_33724646_33730170_33730279_33764349_33764473_33777331
ENSMUST00000041565.11	chr5	-	5403	48	FSM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_37	14.3941162971073	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGCATTCTTTGCTCAA	NA	False	NA	1	True	ATTAAA	-20	NA	31448451	31410620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
ENSMUST00000041587.8	chr15	+	3034	17	FSM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	0	0	0	0	multi-exon	TRUE	canonical	3	379	junction_6	54.6157028701453	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761389	78778785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUST00000041588.13	chr5	+	3333	14	FSM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	10.6471097836719	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690765	140705134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ENSMUST00000041589.6	chr11	+	2288	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	0	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATCCTGTGGTCTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	94102279	94106321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94102558_94104311
ENSMUST00000041606.14	chr4	-	4922	13	FSM	ENSMUSG00000040536.16	ENSMUST00000041606.14	4922	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.35249294896631	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATTTGTATTTATTCT	633	False	NA	NA	False	AATAAA	-24	NA	15149131	14952244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_14955922_14957825_14957918_14960007_14960086_14965905_14966019_14975132_14975187_14978154_14978232_14989157_14989280_15004968_15005106_15052619_15052718_15065323_15065350_15111193_15111303_15140224_15140250_15148817
ENSMUST00000041616.15	chr10	-	5124	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_4	40.3910881259715	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTAGTGTGGTCATTTCT	6802	False	NA	-2	True	AATAAA	-17	NA	78300809	78272577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ENSMUST00000041618.13	chr2	-	4416	15	FSM	ENSMUSG00000039117.17	ENSMUST00000041618.13	4416	15	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_8	22.5641941390083	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	0	True	ATTAAA	-17	NA	179618439	179553944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
ENSMUST00000041621.5	chr1	+	1485	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCCTTTTCCTTAAGG	NA	False	NA	15	True	ATTAAA	-15	NA	37911286	37915309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_37911407_37913944
ENSMUST00000041623.9	chr13	+	4737	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCATTGTATTGTGAGTT	NA	False	NA	22	True	AATAAA	-16	NA	97377612	97389542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97378038_97381478_97383293_97387044
ENSMUST00000041638.8	chr1	-	4582	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCACCTTTTAAACTTT	6700	False	NA	-6	True	AATAAA	-19	NA	54478130	54435162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ENSMUST00000041638.8-0	chr1	-	3004	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	0	1578	0	-1578	multi-exon	FALSE	canonical	3	130	junction_11	22.8358062796764	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGGACAATATTGCCT	6700	False	NA	-8	True	AATAAA	-15	NA	54478130	54436740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ENSMUST00000041639.7	chr10	-	6990	32	FSM	ENSMUSG00000096054.4	ENSMUST00000041639.7	6990	32	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_26	3.88840160136882	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTGATTTTGGTTTG	NA	False	NA	NA	False	ATTAAA	-24	NA	5500692	5286940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_5289386_5292153_5292295_5293357_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5376254_5376276_5386738_5386823_5393139_5393236_5406806_5406869_5491947_5492213_5500458
ENSMUST00000041640.5	chr12	+	2456	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	20.5882622678524	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGTTTCATAATTCGT	NA	False	NA	21	True	AATAAA	-20	NA	36207112	36247290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ENSMUST00000041643.5	chr2	+	5780	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGGCCACAGACATGAA	5949	False	NA	9	True	AATAAA	-16	NA	164721276	164736374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ENSMUST00000041643.5-0	chr2	+	2703	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	0	3077	0	-3077	multi-exon	FALSE	canonical	3	171	junction_4	60.7051017213545	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGAGGGTCTTGGGGC	5949	False	NA	17	True	AATACA	-15	NA	164721276	164733297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ENSMUST00000041656.14	chr15	-	5357	25	FSM	ENSMUSG00000051786.16	ENSMUST00000041656.14	5357	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	17.4315626092442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACAGGATCATGGCTGC	NA	False	NA	NA	False	NA	NA	NA	89007089	88984612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989052_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ENSMUST00000041659.7	chr2	+	1441	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGGCTTCAGAAGGGCA	NA	False	NA	NA	False	AATAAA	-19	NA	30735070	30771263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
ENSMUST00000041683.9	chr11	-	4434	13	FSM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_4	25.4114748795806	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTCTCTGCCTCATTA	NA	False	NA	-4	True	AATAAA	-20	NA	61065881	61042610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ENSMUST00000041684.11	chr11	-	4929	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	9.14911860187284	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGTTTGCATCTG	4120	False	NA	-1	True	AATGAA	-18	NA	115704456	115690008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ENSMUST00000041686.10	chr19	-	1000	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	17.04582060213	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	7045	False	NA	-3	True	AATAAA	-17	NA	6973405	6970385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
ENSMUST00000041717.14	chr19	+	3590	12	FSM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	15.7312133791442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCAGCTGCCGCTTTTA	NA	False	NA	NA	False	NA	NA	NA	55730251	55921684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ENSMUST00000041723.15	chr10	-	4548	17	FSM	ENSMUSG00000035798.15	ENSMUST00000041723.15	4548	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.47030659126339	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGTCTGCTCAGTTC	NA	False	NA	-1	True	AATAAA	-14	NA	110845927	110777640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786547_110790926_110791028_110792146_110792290_110796872_110796999_110803544_110803708_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ENSMUST00000041725.14	chr11	+	2429	15	FSM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	0	0	0	0	multi-exon	TRUE	canonical	3	193	junction_14	11.6647471695966	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116161	50125930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ENSMUST00000041726.4	chr2	-	2105	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	2042	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	13.3356664625357	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1724	False	NA	-19	True	ATTAAA	-19	NA	30718303	30713108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
ENSMUST00000041733.9	chr15	-	5031	26	FSM	ENSMUSG00000037343.9	ENSMUST00000041733.9	5031	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	41.14333967971	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGCCTTTGTTTTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	54935548	54878526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934844_54935242
ENSMUST00000041736.11	chr6	+	2653	10	FSM	ENSMUSG00000034245.11	ENSMUST00000041736.11	2653	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	4.60541817245838	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCAGCTGCCCAAGAT	NA	False	NA	29	True	AATAAA	-31	NA	91133646	91151674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_91133830_91134378_91134528_91136142_91136244_91142542_91142660_91143224_91143268_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
ENSMUST00000041759.14	chr8	+	4191	11	FSM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	33.0128762757806	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGTCCAGTCTTAGCT	NA	False	NA	26	True	ATTAAA	-17	NA	75719983	75758600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUST00000041767.14	chr9	-	5956	13	FSM	ENSMUSG00000037410.14	ENSMUST00000041767.14	5956	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	8.96714682729251	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGCCTCTACGTGGTC	NA	False	NA	0	True	NA	NA	NA	90152822	90084079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ENSMUST00000041769.8	chr8	-	4627	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGGTGACTTTGTT	1768	False	NA	-1	True	AATAAA	-20	NA	105169679	105144311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ENSMUST00000041769.8-0	chr8	-	3142	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	231	1254	-72	-1254	multi-exon	FALSE	canonical	3	129	junction_6	10.797054639525	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTTTTTTTGTTGTTG	1999	False	NA	-9	True	AATATA	-17	NA	105169448	105145565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ENSMUST00000041778.8	chr16	+	5897	3	FSM	ENSMUSG00000054939.7	ENSMUST00000041778.8	5897	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATGTTGGTAAGTACT	NA	False	NA	NA	False	AATAAA	-45	NA	3665131	3676744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3666139_3667214_3667435_3672074
ENSMUST00000041782.4	chr13	-	1274	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	0	3182	0	-3182	multi-exon	FALSE	canonical	3	221	junction_1	5.5	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTTTAGTTTTTCAT	NA	False	NA	-21	True	AATAAA	-17	NA	23608036	23605712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_23606506_23606652_23606853_23607755
ENSMUST00000041783.14	chr5	-	4320	23	FSM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	39	1678	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7.69995170103989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	4450	False	NA	NA	False	AGTAAA	-18	NA	140688094	140649259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ENSMUST00000041804.8	chr5	+	8114	14	FSM	ENSMUSG00000038970.8	ENSMUST00000041804.8	8114	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	10.2628185108664	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTGCTACATTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	144037253	144125022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_144037595_144066170_144066296_144070953_144071099_144080343_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
ENSMUST00000041806.13	chr12	+	2690	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_9	21.5122490573192	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTCTCTGTCCTGGCTGG	3345	False	NA	9	True	ATTAAA	-20	NA	83734925	83781869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUST00000041826.14	chr3	+	2678	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_9	27.8053196793192	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTTGTTGAGTTTT	NA	False	NA	NA	False	AAGAAA	-42	NA	57643482	57742652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ENSMUST00000041830.10	chr2	+	1387	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_2	33.3466640010661	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGGATGTATGT	NA	False	NA	27	True	AATAAA	-33	NA	30697837	30713045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
ENSMUST00000041852.8	chr6	+	1729	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	0	1102	0	104	multi-exon	FALSE	canonical	3	42	junction_5	7.76088944378656	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTAATGACTCATTTG	NA	False	NA	14	True	AATAAA	-19	NA	142291379	142307881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ENSMUST00000041859.9	chr13	-	1713	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	9.43186089804128	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTTGCTGTGTATGTT	NA	False	NA	-4	True	ATTAAA	-26	NA	32522723	32003561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ENSMUST00000041874.9	chr1	-	1735	12	FSM	ENSMUSG00000042684.9	ENSMUST00000041874.9	1735	12	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	13.2309429459759	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTATTGTCTTAATCTT	NA	False	NA	-16	True	AATAAA	-20	NA	153425791	153378760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153379304_153384857_153384898_153388291_153388377_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173_153413248_153421008_153421093_153425393
ENSMUST00000041882.7	chr10	+	678	3	FSM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGTGTCCTGGTGAAGT	NA	False	NA	43	True	AATGAA	-45	NA	80008777	80010980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80009009_80010042_80010160_80010650
ENSMUST00000041890.8	chr7	+	2226	10	FSM	ENSMUSG00000038623.10	ENSMUST00000041890.8	2226	10	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_7	3.33703498170693	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTATTAATTTTGAAG	NA	False	NA	NA	False	AATAAA	-25	NA	81508748	81533819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_81509289_81512897_81513002_81514994_81515093_81518388_81518493_81520444_81520528_81521116_81521239_81523479_81523585_81525471_81525565_81525722_81525843_81532962
ENSMUST00000041892.13	chr5	+	4401	37	FSM	ENSMUSG00000037890.14	ENSMUST00000041892.13	4401	37	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_26	8.39311887467611	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCTGGATTTGATTT	8552	False	NA	NA	False	AATAAA	-23	NA	65357040	65417758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446_65415572_65417456
ENSMUST00000041905.8	chr14	-	3913	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	25.178546099278	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488956	60455526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ENSMUST00000041913.13	chr3	+	3083	12	FSM	ENSMUSG00000032657.16	ENSMUST00000041913.13	3083	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	4.5924839782964	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGAGTATTCTGTTAT	1723	False	NA	9	True	AATAAA	-20	NA	89090509	89096598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
ENSMUST00000041920.5	chr3	+	1243	7	FSM	ENSMUSG00000041750.14	ENSMUST00000041920.5	1243	7	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	26.2408714286194	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTATGTGCGGAGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	86893892	86896840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895662_86895663_86895863_86896457_86896555_86896642
ENSMUST00000041956.14	chr11	+	7340	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	9.62220009633335	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAAGTCTAGTGTGGT	676	False	NA	9	True	TATAAA	-16	NA	93886928	94016911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ENSMUST00000041956.14-0	chr11	+	4756	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	-12	2596	0	-2591	multi-exon	FALSE	canonical	3	49	junction_7	9.62220009633335	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTTTACGAAGCCTGCT	664	False	NA	41	True	AATAAA	-29	NA	93886916	94014315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ENSMUST00000041965.5	chr12	-	6714	37	FSM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_28	14.8707393524629	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111344152	111259409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ENSMUST00000041968.11	chr7	-	3700	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGGTTTTATTTCCAT	NA	False	NA	NA	False	AATAAA	-24	NA	88987995	88788921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ENSMUST00000041968.11-0	chr7	-	3211	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	0	489	0	-489	multi-exon	FALSE	canonical	3	153	junction_2	15.7941154115276	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGGACCTCATTTTCTC	NA	False	NA	-27	True	ATTAAA	-19	NA	88987995	88789410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ENSMUST00000041984.14	chr10	-	2092	8	FSM	ENSMUSG00000039166.17	ENSMUST00000041984.14	2092	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	53.3502099148559	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTTCTTACAGTTTCTA	NA	False	NA	NA	False	ATTAAA	-22	NA	25175062	25046019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25174937
ENSMUST00000041987.7	chr12	-	6291	27	FSM	ENSMUSG00000041415.12	ENSMUST00000041987.8	9851	27	-141	3701	-141	0	multi-exon	FALSE	canonical	3	28	junction_26	55.5751530194573	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAACTCTTTGGAACTA	4269	False	NA	-41	True	AATAAA	-14	NA	104718352	104657701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104718006
ENSMUST00000041998.2	chr2	+	737	3	FSM	ENSMUSG00000039138.2	ENSMUST00000041998.2	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	6	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTTGGTAATGACCCT	NA	False	NA	7	True	AATAAA	-22	NA	179056728	179058675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179056894_179057552_179057714_179058264
ENSMUST00000042009.13	chr14	-	6336	27	FSM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_20	30.9378313442301	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTGTAGACCCTGG	NA	False	NA	-4	True	AATAAA	-16	NA	24227857	24184020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214450_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795
ENSMUST00000042012.7	chr8	-	4525	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTTGCCACTGTGAA	NA	False	NA	-18	True	ATTAAA	-22	NA	111573408	111536870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ENSMUST00000042012.7-0	chr8	-	4283	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	-11	253	0	-253	multi-exon	FALSE	canonical	3	597	junction_23	101.482656646345	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ENSMUST00000042021.5	chr15	-	4010	1	FSM	ENSMUSG00000038984.5	ENSMUST00000042021.5	4010	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTGTATTTAATATTACA	NA	False	NA	NA	False	AATAAA	-19	NA	33688030	33684020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_33684000_33688000
ENSMUST00000042026.5	chr19	-	3321	15	FSM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	23.366206192635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTGCATTTCCTTCTG	NA	False	NA	-1	True	AATAAA	-17	NA	44180881	44136075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490_44145745_44146075_44146204_44179859_44179974_44180478
ENSMUST00000042042.9	chr16	-	1423	9	FSM	ENSMUSG00000035699.9	ENSMUST00000042042.9	2618	9	176	1019	0	0	multi-exon	FALSE	canonical	3	30	junction_3	5.50993421013355	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACACTGCTTCTGTTGGC	NA	False	NA	-8	True	AATAAA	-27	NA	32306521	32294340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_32294697_32295190_32295297_32295984_32296132_32296365_32296478_32297122_32297282_32297533_32297608_32298467_32298623_32304952_32305048_32306302
ENSMUST00000042052.9	chr12	-	8988	43	FSM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_19	32.7528018915334	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGTGTCGTGTTAC	NA	False	NA	-5	True	ATTAAA	-14	NA	51876319	51790504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ENSMUST00000042055.10	chr2	+	2586	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	0	0	0	0	multi-exon	TRUE	canonical	3	440	junction_4	51.3501655905104	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306050	30337817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ENSMUST00000042070.6	chrX	-	5509	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_8	6.78841989185253	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGTCTTTTCTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	103714670	103580574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ENSMUST00000042096.15	chr4	+	4706	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_13	34.6303979591618	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCATTCCTGTCTGA	NA	False	NA	NA	False	NA	NA	NA	139079920	139104547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ENSMUST00000042105.11	chr7	-	2333	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	34	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTACGTGTGTTCTTTAT	3861	False	NA	44	True	AATAAA	-24	NA	45175692	45172340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45172747_45173162_45174816_45175418
ENSMUST00000042122.15	chr13	+	1633	16	FSM	ENSMUSG00000003992.16	ENSMUST00000042122.15	1633	16	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_4	12.5973542195706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTCATTCACTGTGTC	2762	False	NA	-6	True	AATAAA	-14	NA	91609209	91849355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUST00000042125.15	chr1	+	10019	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTTTATGTATTCCAA	NA	False	NA	NA	False	NA	NA	NA	74700903	74742889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ENSMUST00000042125.15-0	chr1	+	4266	20	FSM	ENSMUSG00000033257.15	ENSMUST00000042125.15	10019	20	0	5753	0	0	multi-exon	FALSE	canonical	3	108	junction_15	14.6750584571313	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCCATGTGTGATTTAT	NA	False	NA	10	True	TATAAA	-22	NA	74700903	74737136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74701049_74712002_74712170_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ENSMUST00000042135.14	chr5	+	2914	21	FSM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_7	10.6273232754067	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGGTGTTGGGTTGGG	2152	False	NA	NA	False	AATAAA	-20	NA	136112769	136140714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ENSMUST00000042141.12	chr1	-	4616	28	FSM	ENSMUSG00000042699.12	ENSMUST00000042141.12	4616	28	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_24	29.9642219210858	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTCATTGATGTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	153363406	153331503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354728_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ENSMUST00000042147.6	chr5	-	2075	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_9	55.5126847059778	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTGGCTAAATGTTTTT	8841	False	NA	NA	False	NA	NA	NA	110801283	110796283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ENSMUST00000042148.6	chr3	-	783	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_1	0.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCGTGGTTCTTTT	NA	False	NA	-1	True	NA	NA	NA	8988978	8867205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_8867475_8965045_8965228_8988646
ENSMUST00000042148.6-0	chr3	-	677	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	106	0	106	0	multi-exon	FALSE	canonical	3	890	junction_1	0.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCGTGGTTCTTTT	NA	False	NA	-1	True	NA	NA	NA	8988872	8867205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_8867475_8965045_8965228_8988646
ENSMUST00000042158.13	chr9	-	4483	23	FSM	ENSMUSG00000037681.14	ENSMUST00000042158.13	4483	23	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_20	5.80538365130531	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTATATTTCTATT	NA	False	NA	1	True	AATAAA	-20	NA	99240571	99192015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99193731_99193998_99194049_99197239_99197346_99198698_99198831_99199258_99199358_99199940_99200441_99201555_99201706_99202307_99202395_99202886_99202956_99203434_99203498_99203579_99203643_99204150_99204241_99204649_99204699_99206210_99206294_99206949_99207121_99209951_99210073_99211808_99211865_99212753_99212844_99213411_99213479_99214858_99214936_99218117_99218253_99220820_99220863_99240103
ENSMUST00000042161.15	chr1	-	7030	15	FSM	ENSMUSG00000026110.16	ENSMUST00000042161.15	7030	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	34.7575421267655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGATAGAATTTTTTT	NA	False	NA	42	True	AATAAA	-16	NA	37575316	37478420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119
ENSMUST00000042161.15-0	chr1	-	6265	15	FSM	ENSMUSG00000026110.16	ENSMUST00000042161.15	7030	15	0	765	0	-765	multi-exon	FALSE	canonical	3	116	junction_2	34.7575421267655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTACTCTATCACTAGC	NA	False	NA	NA	False	AATAAA	-37	NA	37575316	37479185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_37483767_37483887_37484001_37488176_37488244_37489409_37489489_37491311_37491506_37491602_37491711_37493824_37493956_37495670_37495786_37501972_37502049_37503501_37503616_37505617_37505665_37529340_37529475_37534953_37535095_37537653_37537822_37575119
ENSMUST00000042163.15	chr5	+	5447	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCAGGTTTGTTGAGACT	NA	False	NA	19	True	AATACA	-18	NA	121535998	121580472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUST00000042163.15-0	chr5	+	3117	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	59	2271	0	207	multi-exon	FALSE	canonical	3	302	junction_8	45.1361728780741	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGCAGGACCCTCATC	NA	False	NA	28	True	ATTAAA	-33	NA	121536057	121578201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUST00000042166.11	chr7	+	1452	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	195	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTAGTTTTGACAGCCC	NA	False	NA	NA	False	AATAAA	-30	NA	81412672	81419239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_81412805_81417274_81417472_81418116
ENSMUST00000042191.12	chr5	+	832	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	196.309845793724	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCAGCTTGATTTT	760	False	NA	23	True	CATAAA	-12	NA	129792566	129795544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
ENSMUST00000042194.10	chr7	-	4234	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGGGTGGGCGCTGCTG	3201	False	NA	NA	False	NA	NA	NA	44983193	44952578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ENSMUST00000042194.10-0	chr7	-	4042	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	-11	203	0	0	multi-exon	FALSE	canonical	3	102	junction_19	18.3832181168949	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3190	False	NA	-10	True	AATAAA	-15	NA	44983204	44952781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ENSMUST00000042227.15	chr11	+	2196	5	FSM	ENSMUSG00000041623.18	ENSMUST00000042227.15	2196	5	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	114.630929508575	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575237	113585473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_113575637_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUST00000042235.15	chr9	-	1794	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	0	0	0	0	multi-exon	FALSE	canonical	3	9075	junction_7	2138.51814038008	10252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTCAATGCTGAAAGT	7100	False	NA	NA	False	ATTAAA	-22	NA	78389006	78385730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ENSMUST00000042281.14	chr11	+	1553	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTCTTAGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	60721456	60749249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUST00000042281.14-0	chr11	+	1211	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	48	294	0	-294	multi-exon	FALSE	canonical	3	194	junction_1	30.3845721085919	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAGAGTTCACAGTAGAA	NA	False	NA	17	True	AATAAA	-14	NA	60721504	60748955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUST00000042288.8	chr13	+	2349	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	57	2047	0	1289	multi-exon	FALSE	canonical	3	52	junction_4	6.61513416341649	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCCTGTGTCTTATTT	NA	False	NA	7	True	AATAAA	-16	NA	3684088	3701775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
ENSMUST00000042296.9	chr17	-	6737	7	FSM	ENSMUSG00000062078.16	ENSMUST00000042296.9	6737	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	441.583388375162	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGGCCCAGAGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10538309	10429107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_10434404_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUST00000042329.12	chrX	+	2447	5	FSM	ENSMUSG00000042271.14	ENSMUST00000042329.12	2447	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	115.070358911407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	11	True	AATAAA	-22	NA	141010932	141022688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_141011010_141011286_141011378_141012519_141012607_141019779_141019925_141020641
ENSMUST00000042334.16	chr17	+	830	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_4	1458.64553610533	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTGCCTGTGATTG	NA	False	NA	1	True	AATAAA	-20	NA	28547444	28550007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUST00000042345.8	chr18	+	3733	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	0	0	0	0	multi-exon	FALSE	canonical	3	1584	junction_14	159.493141807844	3887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGAAGTCGTTCTT	NA	False	NA	33	True	AATAAA	-21	NA	35251911	35387832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ENSMUST00000042360.5	chr15	+	949	5	FSM	ENSMUSG00000039676.5	ENSMUST00000042360.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	9.67923034130297	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGCCTCCTTTGAAGCT	-3	True	NA	9	True	AATAAA	-22	NA	9436113	9466124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_9436254_9457782_9457920_9461742_9461921_9462676_9462887_9465840
ENSMUST00000042365.9	chr13	-	5202	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	12.8002403823582	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTGGTTTTTATATGA	NA	False	NA	81	True	AATACA	-19	NA	17979236	17891979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ENSMUST00000042390.5	chr2	+	3755	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_8	34.4394597647653	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3965	False	NA	33	True	ATTAAA	-21	NA	25222740	25242224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUST00000042391.13	chr9	+	2658	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	7.15454401062709	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGAGCATGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	50679535	50684648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ENSMUST00000042391.13-0	chr9	+	1964	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	15	679	0	0	multi-exon	FALSE	canonical	3	72	junction_2	7.15454401062709	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	2	True	AAAAAG	-17	NA	50679550	50683969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ENSMUST00000042402.12	chr3	+	4775	19	FSM	ENSMUSG00000038902.15	ENSMUST00000042402.12	4775	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	17.676796536773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAATCCCACTGAAC	NA	False	NA	68	True	TATAAA	-11	NA	94745023	94788186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771795_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ENSMUST00000042405.8	chr7	+	1197	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	0	0	0	0	multi-exon	FALSE	canonical	3	2081	junction_3	279.620725269069	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8531	False	NA	0	True	ATTAAA	-14	NA	27869134	27878694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUST00000042410.5	chr5	+	2470	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	14.1852818873021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3394311	3572225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ENSMUST00000042412.5	chr3	-	2423	5	FSM	ENSMUSG00000040289.9	ENSMUST00000042412.5	2423	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.11803398874989	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTGTCTGTCTTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	8732316	8728418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_8730125_8731004_8731087_8731331_8731416_8731561_8731638_8731841
ENSMUST00000042450.10	chr13	+	3855	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	108.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCGTGGTCATGGTGTC	NA	False	NA	9	True	NA	NA	NA	58550076	58558962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_58550604_58554815_58554905_58555723
ENSMUST00000042450.10-0	chr13	+	2434	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	369	1052	-68	0	multi-exon	FALSE	canonical	3	159	junction_1	108.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58550445	58557910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_58550604_58554815_58554905_58555723
ENSMUST00000042452.11-1	chr2	-	2876	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	0	933	0	-683	multi-exon	FALSE	canonical	3	320	junction_3	11.5385826204473	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTTTAATAGCTTTA	NA	False	NA	-4	True	AATAAA	-16	NA	151583230	151558664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ENSMUST00000042468.9	chr9	-	891	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	292	899	0	0	multi-exon	TRUE	canonical	3	19	junction_2	3.74165738677394	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTCTATTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	50679460	50675026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
ENSMUST00000042471.11	chr14	-	5150	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATCTATGCTGAATGT	2527	False	NA	NA	False	NA	NA	NA	99337206	99312641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ENSMUST00000042471.11-0	chr14	-	3086	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	0	2064	0	0	multi-exon	FALSE	canonical	3	393	junction_13	28.371596712205	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTATTGAGTTGCTGA	2527	False	NA	-11	True	AATACA	-24	NA	99337206	99314705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ENSMUST00000042477.13	chr11	+	1106	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_3	45.4682306671372	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTGTTACTACTGCTG	NA	False	NA	20	True	ATTAAA	-17	NA	101144532	101150375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUST00000042493.10	chr1	-	1705	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	5.33853912601566	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCTCTCATTTTATTTT	7204	False	NA	1	True	AATAAA	-23	NA	34478753	34475750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
ENSMUST00000042497.14	chr19	-	1661	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_6	107.070877644232	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	6426	False	NA	3	True	AATAAA	-30	NA	4062806	4057496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUST00000042498.14	chr1	-	4427	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_27	104.811974833924	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	NA	False	NA	NA	False	AATAAA	-27	NA	93373408	93335483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ENSMUST00000042509.13	chr1	-	5882	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	45.2326708589218	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACATAGCAGTGTATTG	8834	False	NA	78	True	AATAAA	-15	NA	97698136	97633772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ENSMUST00000042512.8	chr2	+	1472	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.40832691319598	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAGACACAGTGGCATC	4825	False	NA	NA	False	NA	NA	NA	10085434	10097617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
ENSMUST00000042517.8	chr13	+	4547	13	FSM	ENSMUSG00000041817.15	ENSMUST00000042517.8	4547	13	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_9	17.0739811799514	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8717	False	NA	14	True	AATAAA	-20	NA	97208150	97266023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ENSMUST00000042546.4	chr9	-	2653	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6.44797556515911	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAAATGTTTCAAGCTG	NA	False	NA	3	True	ATTAAA	-37	NA	122123489	122004939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ENSMUST00000042556.11	chr10	-	3872	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_16	14.9260678009984	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTGTCTGTGTGTGG	NA	False	NA	-5	True	AATACA	-17	NA	78020983	78006742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ENSMUST00000042561.14	chr11	+	3097	14	FSM	ENSMUSG00000038178.17	ENSMUST00000042561.14	6891	14	0	3794	0	-102	multi-exon	FALSE	canonical	3	5	junction_1	10.1858470089601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCTCCTCACGTATC	6875	False	NA	19	True	AATAAA	-22	NA	75422523	75464607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75422568_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ENSMUST00000042564.17	chr14	-	2573	9	FSM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	1775.59757106587	3360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTATTGCTGTACTT	NA	False	NA	-18	True	AATAAA	-11	NA	36857096	36842780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856921
ENSMUST00000042575.7	chr4	-	3856	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	19	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGCAACATTGATT	9561	False	NA	0	True	AATAAA	-28	NA	40269850	40259600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40263082_40268303_40268502_40269673
ENSMUST00000042581.4	chr9	+	2599	6	FSM	ENSMUSG00000037977.7	ENSMUST00000042581.4	2599	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.32664991614216	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGAGTCTGTGACACTT	NA	False	NA	NA	False	ATTAAA	-28	NA	107217800	107226891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107217988_107218509_107218617_107219405_107219789_107223344_107223371_107224016_107224165_107225143
ENSMUST00000042601.9	chr8	-	4463	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_24	17.2223966609053	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292493	110274642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
ENSMUST00000042608.8	chr8	-	1434	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	-18	1738	0	0	multi-exon	TRUE	canonical	3	179	junction_7	13.7637204272682	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427734	106424788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ENSMUST00000042615.13	chr2	-	6029	17	FSM	ENSMUSG00000038831.17	ENSMUST00000042615.13	6029	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	11.6536944249453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCGTTCTATTTATTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	33261493	33023432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036663_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33226524_33226633_33230724_33230846_33261281
ENSMUST00000042641.14	chr7	+	3848	5	FSM	ENSMUSG00000037640.16	ENSMUST00000042641.14	2727	5	107	-1228	107	1228	multi-exon	FALSE	canonical	3	15	junction_1	62.997519792449	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGGCTCCATTTTC	NA	False	NA	37	True	NA	NA	NA	27431042	27451114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27431090_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ENSMUST00000042647.7	chr6	-	2993	17	FSM	ENSMUSG00000038167.7	ENSMUST00000042647.7	3299	17	306	0	306	0	multi-exon	FALSE	canonical	0	0	junction_7	3.59198326137525	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACATGGTTGTTTGGTG	NA	False	NA	NA	False	TATAAA	-8	NA	125357450	125339622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544_125347678_125349020_125349141_125349440_125349579_125349775_125349926_125350069_125350181_125351491_125351642_125351936_125351988_125352205_125352302_125352686_125352852_125354344_125354501_125355664_125355874_125356717_125356940_125357312
ENSMUST00000042661.8	chr5	-	4658	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	9.95255014746823	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTCTCTCTCTCTCTC	1276	False	NA	NA	False	AATAAA	-16	NA	140634786	140606332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ENSMUST00000042662.10	chr14	-	2240	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	792	junction_1	24.5	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTCCTTTTGATATAC	NA	False	NA	NA	False	AATAAA	-18	NA	99283556	99271979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_99273947_99277950_99278097_99283429
ENSMUST00000042665.9	chr16	-	7417	17	FSM	ENSMUSG00000034422.15	ENSMUST00000042665.9	7417	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	4.31883592533914	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTGGTGGAATTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	35691914	35653243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_35655306_35656360_35656536_35659631_35659766_35661091_35661692_35661778_35662001_35664613_35664782_35665097_35665161_35665639_35665790_35666379_35666456_35673101_35673324_35673888_35674129_35676852_35679135_35680799_35681037_35683729_35683964_35685488_35685523_35686518_35686659_35691536
ENSMUST00000042700.12	chr19	-	797	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_6	961.706469424706	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCCGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4092263	4090284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
ENSMUST00000042702.7	chr15	+	1164	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.68954408012983	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACCGTGACAAGGAGTG	115	False	NA	27	True	ATTAAA	-27	NA	31602263	31617681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUST00000042710.8	chr18	-	1440	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	482	68	71	-68	multi-exon	FALSE	canonical	3	18	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTGAAGCTTTTCTTT	NA	False	NA	-21	True	AATAAA	-13	NA	60634577	60607330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_60608658_60634464
ENSMUST00000042717.13	chr17	-	3085	7	FSM	ENSMUSG00000045409.17	ENSMUST00000042717.13	3085	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	21.4864298259778	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTGAGTTGCGTGGTA	NA	False	NA	-8	True	NA	NA	NA	36582896	36569764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582784
ENSMUST00000042724.8	chr8	-	4707	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	8.95392871906924	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTACTGTCCTGTTTT	NA	False	NA	-9	True	ATTAAA	-14	NA	81741557	81707361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ENSMUST00000042726.14	chr7	-	1784	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_5	133.345925331332	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3611	False	NA	-14	True	AATAAA	-16	NA	30349742	30340425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUST00000042729.16	chr3	-	4539	13	FSM	ENSMUSG00000040998.19	ENSMUST00000042729.16	3601	13	0	-938	0	0	multi-exon	FALSE	canonical	2	2	junction_10	2.98491578142872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTCTTCCTTGGTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	132655921	132587505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132637342_132637394_132653807_132653909_132655733
ENSMUST00000042732.6	chr16	-	4179	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	4	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTAGTCCATGTCA	7823	False	NA	2	True	ATTAAA	-17	NA	32065976	32048929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_32052087_32057217_32057575_32065311
ENSMUST00000042734.3	chr1	+	3008	2	FSM	ENSMUSG00000038323.4	ENSMUST00000042734.3	3008	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGGATGTGTTTAT	NA	False	NA	8	True	ATTAAA	-19	NA	57416778	57424582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_57417106_57421901
ENSMUST00000042744.16	chr3	-	4619	12	FSM	ENSMUSG00000040998.19	ENSMUST00000042744.16	4619	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	2.17802700922017	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTCTTCCTTGGTTTT	NA	False	NA	NA	False	AATAAA	-40	NA	132656052	132587505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655733
ENSMUST00000042750.3	chr4	-	2004	2	FSM	ENSMUSG00000039611.3	ENSMUST00000042750.3	2989	2	70	915	70	-915	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGTCAGTTGTCTTG	1	True	NA	-1	True	AATAAA	-13	NA	49597806	49585420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_49587242_49597623
ENSMUST00000042753.14	chr5	-	2368	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTATCTGCGTGTC	1474	False	NA	-9	True	AATAAA	-21	NA	3646585	3633977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
ENSMUST00000042753.14-0	chr5	-	1865	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	503	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	28.3813318926368	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCTATCTGCGTGTC	1977	False	NA	-9	True	AATAAA	-21	NA	3646082	3633977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
ENSMUST00000042766.6	chr6	-	5560	7	FSM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2.3629078131263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAAATTCCAGTTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	57512411	57483486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721_57502240_57512264
ENSMUST00000042766.6-0	chr6	-	3536	7	FSM	ENSMUSG00000037826.6	ENSMUST00000042766.6	5560	7	-42	2066	0	-2066	multi-exon	FALSE	canonical	3	10	junction_2	2.3629078131263	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTAAGGTCTTTTCATG	NA	False	NA	NA	False	ATTAAA	-13	NA	57512453	57485552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_57487835_57490926_57491062_57491958_57492104_57492577_57492744_57499733_57499835_57501721_57502240_57512264
ENSMUST00000042771.8	chr10	-	4227	32	FSM	ENSMUSG00000035673.11	ENSMUST00000042771.8	4227	32	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_31	40.678557708356	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTACTTCAGCCTCTGG	NA	False	NA	NA	False	NA	NA	NA	79938532	79893249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894567_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938450
ENSMUST00000042775.5	chr2	-	1014	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGAGGGTCTCCTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	164675376	164672651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164672908_164674618
ENSMUST00000042775.5-0	chr2	-	391	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	623	0	623	0	multi-exon	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGAGGGTCTCCTTGC	NA	False	NA	NA	False	AATAAA	-24	NA	164674753	164672651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164672908_164674618
ENSMUST00000042779.4	chr12	+	3413	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	256	8521	256	-8521	multi-exon	FALSE	canonical	3	110	junction_1	0	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAAGAAATCAAT	NA	False	NA	NA	False	GATAAA	-4	NA	76417295	76435203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76417505_76431999
ENSMUST00000042780.14	chr11	-	4934	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCAGACAAGCATGTT	3331	False	NA	NA	False	AATAAA	-11	NA	106503756	106392972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ENSMUST00000042780.14-0	chr11	-	4811	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	-66	189	-66	57	multi-exon	FALSE	canonical	3	112	junction_11	20.6061051692923	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3265	False	NA	-1	True	ATTAAA	-27	NA	106503822	106393161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ENSMUST00000042808.13	chr11	+	2887	11	FSM	ENSMUSG00000038188.18	ENSMUST00000042808.13	2887	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	2.37697286480094	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTAATTTATTTGGGGG	NA	False	NA	NA	False	ATTAAA	-25	NA	75404365	75417408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75404517_75404830_75404890_75405134_75405237_75405991_75406515_75411119_75411339_75411728_75411858_75412777_75412882_75413004_75413123_75414600_75414723_75414816_75414964_75416195
ENSMUST00000042818.11	chr15	+	2427	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	0	0	0	0	multi-exon	TRUE	canonical	3	800	junction_3	47.4021096576935	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88746388	88749929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
ENSMUST00000042834.4	chr13	-	1363	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	0	798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATTATTTTGTTGAA	NA	False	NA	-2	True	ATTAAA	-19	NA	30729345	30724290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_30725325_30729016
ENSMUST00000042852.7	chr18	-	9651	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGTGGATACTGTTG	NA	False	NA	NA	False	AATAAA	-14	NA	68433404	68393257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ENSMUST00000042852.7-0	chr18	-	3258	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	131	6262	0	-6262	multi-exon	FALSE	canonical	3	166	junction_3	16.3367343397905	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAGAATATCACATCAT	NA	False	NA	NA	False	AATAAA	-14	NA	68433273	68399519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ENSMUST00000042901.15	chr3	+	4316	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	142.05353233605	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912070	68941956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ENSMUST00000042923.9	chr10	-	1891	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	20.6723713873254	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9658	False	NA	-11	True	AATAAA	-25	NA	81463631	81457620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ENSMUST00000042942.10	chr7	+	4505	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_10	14.275615919341	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTCTCTCCCTGTTTC	1931	False	NA	23	True	AATAAA	-35	NA	128346666	128386560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ENSMUST00000042942.10-0	chr7	+	3465	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	0	1040	0	-1040	multi-exon	TRUE	canonical	3	121	junction_10	14.275615919341	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTATTTTTATTTAAAT	1931	False	NA	40	True	ATTAAA	-28	NA	128346666	128385520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ENSMUST00000042953.10	chr12	+	7234	52	FSM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_37	10.8075685101282	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTTGAGTACTTCCTT	NA	False	NA	NA	False	AATAAA	-28	NA	13319133	13633812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ENSMUST00000042974.15	chr6	+	1773	3	FSM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCTTCGTGTCTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	82018603	82070080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_82018883_82048035_82048224_82068774
ENSMUST00000042975.7	chr12	-	2991	1	FSM	ENSMUSG00000034435.7	ENSMUST00000042975.7	2991	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACATTACTTAGTTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	73593166	73590175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_73590200_73593200
ENSMUST00000042988.7	chr14	-	3450	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	17.6572301841987	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCTGTGTGTGTCTGT	NA	False	NA	-5	True	AATAAA	-13	NA	47805891	47778350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
ENSMUST00000042990.7	chr6	+	1662	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	387	13425	0	0	multi-exon	FALSE	canonical	3	2187	junction_4	1676.62542517001	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5872	False	NA	37	True	AATATA	-25	NA	67243994	67261295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000043045.10	chrX	+	1609	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	40.4807361593141	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGCGTGCTTTCCCG	4006	False	NA	22	True	AATAAA	-35	NA	7588455	7594445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUST00000043050.9	chr5	+	1819	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	25	487	0	-487	multi-exon	FALSE	canonical	3	68	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCATTCCTGTGGTT	NA	False	NA	18	True	AGTAAA	-14	NA	140491329	140510992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140491452_140509295
ENSMUST00000043059.9	chr9	+	3297	14	FSM	ENSMUSG00000038264.9	ENSMUST00000043059.9	3297	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	2.43495258328376	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGTGCCCTGTCT	NA	False	NA	11	True	AATAAA	-16	NA	57847395	57870148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57847612_57860818_57860962_57861452_57861495_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
ENSMUST00000043074.14	chr19	+	508	5	FSM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_1	5677.26170790109	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	1081	False	NA	1	True	AATAAA	-13	NA	6107972	6109546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000043077.8	chr7	-	1277	2	FSM	ENSMUSG00000035686.9	ENSMUST00000043077.8	1277	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATGTTGGTCTTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	97066937	97062144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97062723_97066238
ENSMUST00000043077.8-0	chr7	-	1066	2	FSM	ENSMUSG00000035686.9	ENSMUST00000043077.8	1277	2	211	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCATGTTGGTCTTTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	97066726	97062144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97062723_97066238
ENSMUST00000043082.16	chr12	+	3449	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	19	10039	0	0	multi-exon	FALSE	canonical	3	204	junction_3	27.4419701988589	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCAAGGTGTATATCCT	NA	False	NA	NA	False	NA	NA	NA	44315949	44359276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ENSMUST00000043087.15	chr15	-	1793	8	FSM	ENSMUSG00000035845.18	ENSMUST00000043087.15	1793	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.4193747210806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTCTTGTTGTTGGT	9277	False	NA	-1	True	AATAAA	-16	NA	88703488	88689447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88698631_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
ENSMUST00000043098.9	chr6	-	1223	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	3.77123616632825	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTTCTCAACGTGTGGT	NA	False	NA	-7	True	AATAAA	-19	NA	67014390	67012079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
ENSMUST00000043108.9	chr3	+	7046	26	FSM	ENSMUSG00000051278.13	ENSMUST00000043108.9	7046	26	0	0	0	0	multi-exon	TRUE	canonical	1	17	junction_9	21.9453867589523	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCTTATGTGGAAAAAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	127347137	127411670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ENSMUST00000043112.9	chr14	+	2937	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAGGTCTGGTCTTAA	NA	False	NA	6	True	AATAAA	-14	NA	47710017	47769411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47710175_47766631
ENSMUST00000043126.12	chr2	-	6872	14	FSM	ENSMUSG00000038369.15	ENSMUST00000043126.12	6872	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	45.8600908088294	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTATTGGAAAGAATGAG	NA	False	NA	-10	True	AATAAA	-26	NA	155282703	155232575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394_155250371_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607
ENSMUST00000043138.13	chr7	+	4734	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	8.64088073894081	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATGCTGTAGCCTTTTT	7176	False	NA	NA	False	ATTAAA	-3	NA	128213083	128298149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ENSMUST00000043148.13	chr6	+	4248	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_3	124.109578598914	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCTTTCTCTTCAT	NA	False	NA	57	True	AATAAA	-15	NA	66873380	66998334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUST00000043150.6	chr19	+	2589	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	562	1092	562	950	multi-exon	FALSE	canonical	3	56	junction_1	11.2473730871055	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	55242362	55285060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUST00000043151.12	chrX	+	3087	13	FSM	ENSMUSG00000041020.15	ENSMUST00000043151.12	3087	13	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_2	33.5343936214084	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTTTTGACTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	158242120	158281579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
ENSMUST00000043152.6	chr11	-	3877	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGAGAATGTTAATCTT	NA	False	NA	-14	True	NA	NA	NA	79853216	79824778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ENSMUST00000043152.6-0	chr11	-	3031	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	0	846	0	-846	multi-exon	FALSE	canonical	3	409	junction_5	33.8632416611651	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGGTATTTGTTTGTTT	NA	False	NA	-8	True	AATAAA	-19	NA	79853216	79825624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ENSMUST00000043160.13	chr2	-	4888	35	FSM	ENSMUSG00000040383.17	ENSMUST00000043160.13	4888	35	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_21	28.9958832539162	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGCATACTTGCCCTT	7809	False	NA	-3	True	ATTAAA	-19	NA	114005820	113931650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ENSMUST00000043169.14	chr12	-	5446	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	22.9818668733885	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTAAATGAGTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	85017674	84964923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ENSMUST00000043172.15	chr15	-	2953	10	FSM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	31.3049516849971	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGGTGTGGATCCCTCTA	NA	False	NA	0	True	AATAAA	-16	NA	102165952	102143372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164975_102165674
ENSMUST00000043195.11	chr6	+	4192	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGTTCCAGGAAGACAG	NA	False	NA	NA	False	NA	NA	NA	81900649	81936896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ENSMUST00000043195.11-1	chr6	+	3232	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	0	960	0	-301	multi-exon	FALSE	canonical	3	32	junction_9	9.77161066559654	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATCCTGTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	81900649	81935936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ENSMUST00000043200.8	chr4	-	2905	10	FSM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_3	19.2841007882109	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCGGCTGTCACTGTG	NA	False	NA	-2	True	AATAAA	-21	NA	120874444	120825513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
ENSMUST00000043204.8	chr12	-	3688	4	FSM	ENSMUSG00000035329.8	ENSMUST00000043204.8	3688	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0.942809041582063	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGATGAATTTTATT	NA	False	NA	-11	True	AATAAA	-15	NA	59266511	59247440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_59249466_59251096_59251783_59252766_59252878_59265645
ENSMUST00000043208.8	chr12	-	6402	3	FSM	ENSMUSG00000034460.10	ENSMUST00000043208.8	6402	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	15	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGTTGAAGAAAGATT	NA	False	NA	-1	True	AATAAA	-18	NA	73160199	73146382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_73151013_73155434_73156124_73159116
ENSMUST00000043214.8	chr15	-	1333	7	FSM	ENSMUSG00000033220.8	ENSMUST00000043214.8	3038	7	2	1703	0	1025	multi-exon	FALSE	canonical	3	13	junction_3	5.64702478203247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTTGATTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	78456981	78445069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78445686_78446105_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
ENSMUST00000043227.13	chr14	+	3903	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	28.7856139459962	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438676	59474714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUST00000043235.8	chr1	-	1744	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	0	2636	0	660	multi-exon	FALSE	canonical	3	508	junction_2	54.8414381041684	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTTTGCTGTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	165064512	165042490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ENSMUST00000043237.14	chr2	+	3979	4	FSM	ENSMUSG00000038375.16	ENSMUST00000043237.14	3979	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	13.490737563232	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTGCCTCAGCTGAG	4041	False	NA	9	True	AATAAA	-21	NA	155223733	155231770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155223938_155227209_155227385_155227800_155228090_155228459
ENSMUST00000043269.14	chr13	-	2676	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4765	False	NA	-23	True	AATAAA	-15	NA	58550316	58539052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000043269.14-0	chr13	-	1979	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	-14	711	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	1087.93485507584	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000043273.16	chr7	+	884	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	81.3154602866678	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTTTCCTTCCACC	NA	False	NA	36	True	AATAAA	-24	NA	30262745	30264790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUST00000043283.14	chr5	-	2777	18	FSM	ENSMUSG00000041890.18	ENSMUST00000043283.14	4938	18	-3	2164	0	0	multi-exon	FALSE	canonical	3	47	junction_4	65.8330172418791	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911556	114867635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUST00000043285.5	chr11	+	2400	7	FSM	ENSMUSG00000040978.5	ENSMUST00000043285.5	2400	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.25830573921179	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGCCTCTCTTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	8998593	9019356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_8999201_9002693_9002880_9004209_9004319_9006421_9006579_9009910_9010009_9011165_9011387_9018334
ENSMUST00000043286.15	chr18	-	2591	10	FSM	ENSMUSG00000038425.19	ENSMUST00000043286.15	2591	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGCTCTCACTGTAAGT	NA	False	NA	-16	True	AATAAA	-19	NA	70663505	70641754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUST00000043296.10	chr14	-	2964	19	FSM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_12	54.7968470301389	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTCTTCGCATTGTTA	NA	False	NA	NA	False	NA	NA	NA	47655864	47625235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ENSMUST00000043305.14	chr4	-	4191	16	FSM	ENSMUSG00000037622.15	ENSMUST00000043305.14	4191	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	124.591599502802	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCATTTGTTGGGGC	4264	False	NA	1	True	ATTAAA	-22	NA	133066635	133019769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133066306
ENSMUST00000043311.7	chr10	+	3499	22	FSM	ENSMUSG00000035697.15	ENSMUST00000043311.7	3499	22	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	15.7468637773006	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCCGATCTTGTTCTT	820	False	NA	12	True	AATAAA	-17	NA	79855486	79867302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79855633_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUST00000043314.10	chr7	-	2745	9	FSM	ENSMUSG00000040703.12	ENSMUST00000043314.10	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	4.7368238303741	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGACCCCCTCTGCCTGT	1604	False	NA	-6	True	AATAAA	-18	NA	25516078	25501899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25503185_25503340_25503483_25505295_25505484_25507468_25507611_25508603_25508784_25508862_25509024_25511026_25511177_25514309_25514476_25515747
ENSMUST00000043317.7	chr10	+	1268	5	FSM	ENSMUSG00000036764.13	ENSMUST00000043317.7	3025	5	8	1749	0	0	multi-exon	TRUE	canonical	3	25	junction_2	1.58113883008419	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGCATTTAGGATGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	63222349	63244606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_63222555_63231563_63231643_63233017_63233158_63242780_63242986_63243967
ENSMUST00000043325.9	chr3	-	6177	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGTAGTAGTATGCGC	NA	False	NA	NA	False	AATAAA	-15	NA	144275942	144135466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ENSMUST00000043325.9-1	chr3	-	4211	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	0	1966	0	-1966	multi-exon	FALSE	canonical	3	89	junction_1	15.667553166408	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAATGTCAATGTGTGTG	NA	False	NA	NA	False	AGTAAA	-26	NA	144275942	144137432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ENSMUST00000043338.10	chr1	-	5535	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	7.62380803664362	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTGTCTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	165022007	165001905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ENSMUST00000043342.10	chr3	+	1576	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_6	12.9331089117215	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCAGTCAGCGACTGAG	7758	False	NA	NA	False	TTTAAA	-6	NA	115681831	115722981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ENSMUST00000043356.13	chr11	-	4392	20	FSM	ENSMUSG00000042208.16	ENSMUST00000043356.13	4392	20	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_12	10.4085517791143	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAACTTGGCA	NA	False	NA	NA	False	AATAAA	-13	NA	23579027	23523250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872
ENSMUST00000043359.9	chr8	-	6113	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGGTAAGTCTGAATA	NA	False	NA	NA	False	AATAAA	-15	NA	81466126	81425135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ENSMUST00000043359.9-1	chr8	-	4476	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	201	1436	129	-1436	multi-exon	FALSE	canonical	3	1231	junction_15	129.150386396008	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTTTCTTTCCATTT	NA	False	NA	-1	True	AATAAA	-41	NA	81465925	81426571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ENSMUST00000043378.9	chr5	-	1559	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_10	35.0345756018723	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	5063	False	NA	-4	True	AATAAA	-21	NA	135773302	135764338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUST00000043396.15	chr12	-	2674	3	FSM	ENSMUSG00000037169.16	ENSMUST00000043396.15	2674	3	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_2	66.5	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGATGTTTTCCTTCCTAG	NA	False	NA	-18	True	AATAAA	-20	NA	12991915	12986093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_12987612_12989610_12990488_12991636
ENSMUST00000043397.14	chr11	-	3056	13	FSM	ENSMUSG00000035172.16	ENSMUST00000043397.14	3056	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	15.6142740963375	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	691	False	NA	3	True	AAGAAA	-22	NA	101062177	101053504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ENSMUST00000043414.12	chr15	+	5299	23	FSM	ENSMUSG00000036661.15	ENSMUST00000043414.12	5299	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	7.34678205825995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTGCTATGAATGGAT	NA	False	NA	NA	False	AATAAA	-32	NA	73384408	73444091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ENSMUST00000043415.13	chr16	-	1803	7	FSM	ENSMUSG00000039179.14	ENSMUST00000043415.13	1803	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.40947204913349	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTTAGGAAAATGTGAA	NA	False	NA	4	True	AATAAA	-22	NA	10213354	10175811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10176300_10179121_10179277_10196760_10196984_10200653_10200798_10203926_10203998_10205018_10205103_10212716
ENSMUST00000043419.10	chr11	-	1437	7	FSM	ENSMUSG00000078812.11	ENSMUST00000043419.10	1437	7	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_6	9644.56352477049	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9941	False	NA	-15	True	AATAAA	-20	NA	69812212	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811988
ENSMUST00000043422.8	chr6	-	2352	7	FSM	ENSMUSG00000038213.8	ENSMUST00000043422.8	2352	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.61880215351701	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCACTTTCTTCTCTCTC	8513	False	NA	NA	False	AATAAA	-17	NA	125208823	125200895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125201673_125201826_125201914_125203453_125203760_125205025_125205365_125207107_125207381_125207517_125207761_125208496
ENSMUST00000043429.12	chr4	-	1932	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_8	23.5424491839793	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682903	120614634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ENSMUST00000043437.14	chr18	-	4270	20	FSM	ENSMUSG00000038524.14	ENSMUST00000043437.14	4270	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_13	2.48875587737619	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGTCATGTGTTCGTC	NA	False	NA	-2	True	AATAAA	-16	NA	38102827	38090486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
ENSMUST00000043459.13	chr12	-	1706	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	30.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGGATCTGCCTGGTCT	NA	False	NA	-7	True	NA	NA	NA	110945455	110942860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110944205_110944381_110944562_110945273
ENSMUST00000043464.14	chr17	+	5530	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_11	16.0216853046114	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATGGGACTGCTA	NA	False	NA	19	True	AATAAA	-20	NA	46961262	46975290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ENSMUST00000043484.8	chr18	+	1926	8	FSM	ENSMUSG00000038555.8	ENSMUST00000043484.8	1926	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.56347977784662	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGATCTCTGCGTTGTT	NA	False	NA	16	True	AATAAA	-22	NA	34973641	34980516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34973841_34975506_34975580_34975909_34975987_34978304_34978426_34978627_34978742_34978997_34979146_34979241_34979373_34979453
ENSMUST00000043493.7	chr13	-	7667	19	FSM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	40.7369232218174	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGTTGTGATTGTTTT	NA	False	NA	-9	True	AATAAA	-19	NA	70785753	70736815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70769556_70769576_70772041_70772077_70772526_70772586_70785635
ENSMUST00000043498.9	chr18	-	2032	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_2	40.0044002681746	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088069	38070024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ENSMUST00000043503.11	chr17	+	6876	22	FSM	ENSMUSG00000038677.15	ENSMUST00000043503.11	6876	22	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_15	6.58693821908486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTAGCAAGCATCCTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	28361114	28393828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ENSMUST00000043517.8	chr7	-	2905	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	10.2359909243845	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTGTCCGAGCCTTTG	9931	False	NA	-1	True	NA	NA	NA	19655085	19637502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ENSMUST00000043520.5	chr8	+	2012	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	11.3572731903828	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTCTGCAACAAT	NA	False	NA	14	True	AATAAA	-20	NA	13957802	13990522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUST00000043521.5	chr16	-	3992	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAACCTTTGCCCACTTT	NA	False	NA	NA	False	ATTAAA	-33	NA	35184288	35131500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
ENSMUST00000043521.5-0	chr16	-	1645	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	66	2281	0	652	multi-exon	FALSE	canonical	3	72	junction_4	6.0736223860962	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGTGGTCTTCCAAATT	NA	False	NA	-24	True	AATACA	-13	NA	35184222	35133781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
ENSMUST00000043531.10	chr8	+	4108	22	FSM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_11	11.8587682955494	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2642	False	NA	7	True	NA	NA	NA	106331886	106348851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ENSMUST00000043551.11	chr5	-	6426	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_3	19.1839036868105	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATTCTCTGCCTTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	3852925	3739999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ENSMUST00000043551.11-0	chr5	-	6195	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	-189	420	-189	-420	multi-exon	FALSE	canonical	3	27	junction_3	19.1839036868105	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCCATTTTTGTCTCA	NA	False	NA	-6	True	ATTAAA	-16	NA	3853114	3740419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ENSMUST00000043552.17	chr13	-	1547	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_6	98.4119742036845	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCTGCCTCACTGG	8257	False	NA	2	True	AATAAA	-28	NA	34120181	34101900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
ENSMUST00000043560.15	chr1	-	5792	23	FSM	ENSMUSG00000042772.16	ENSMUST00000043560.15	5792	23	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_22	82.5368938292156	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152753919	152712746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791
ENSMUST00000043577.3	chr16	+	1416	1	FSM	ENSMUSG00000041378.3	ENSMUST00000043577.3	1416	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCCTGTCCTCTGTCC	NA	False	NA	NA	False	AGTAAA	-19	NA	18595596	18597012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18595600_18597000
ENSMUST00000043584.5	chr2	-	1598	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1343	junction_2	25.8499946271217	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGCCTGTCCAATTCCT	NA	False	NA	-24	True	ATTAAA	-18	NA	25114714	25112171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
ENSMUST00000043589.8	chr2	-	6383	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTTACCTTCCATTGG	NA	False	NA	NA	False	AATAAA	-29	NA	142743451	142459393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ENSMUST00000043589.8-1	chr2	-	5423	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	87	873	0	364	multi-exon	FALSE	canonical	3	64	junction_14	9.18050107564941	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCCTCAGAAGTGTATG	NA	False	NA	NA	False	AATAAA	-16	NA	142743364	142460266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ENSMUST00000043598.14	chr11	+	1153	5	FSM	ENSMUSG00000038217.14	ENSMUST00000043598.14	1153	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	12.2754836971909	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGACATGACAGCCG	NA	False	NA	NA	False	NA	NA	NA	75358904	75361483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297_75360728_75361225
ENSMUST00000043604.6	chr10	-	3414	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTTTGTGATTATTAGT	4223	False	NA	0	True	AATAAA	-19	NA	81381024	81364557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ENSMUST00000043604.6-0	chr10	-	1485	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	81	1848	81	-285	multi-exon	FALSE	canonical	3	370	junction_6	26.2339898266013	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATACATGAACAGCAG	4304	False	NA	38	True	NA	NA	NA	81380943	81366405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ENSMUST00000043610.13	chr19	+	7190	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	5.44558536798387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTTCTTATATTCTC	241	False	NA	NA	False	ATTAAA	-15	NA	29499681	29584229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ENSMUST00000043610.13-0	chr19	+	5493	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	53	1644	0	0	multi-exon	FALSE	canonical	3	11	junction_12	5.44558536798387	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGACTGTGGGATCCTG	294	False	NA	NA	False	AATAAA	-16	NA	29499734	29582585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ENSMUST00000043616.7	chr4	-	8691	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTCTACTTTCACGTC	NA	False	NA	3	True	AATAAA	-21	NA	108158293	108086920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ENSMUST00000043616.7-0	chr4	-	5512	14	FSM	ENSMUSG00000034636.10	ENSMUST00000043616.7	8691	14	0	3179	0	-3179	multi-exon	FALSE	canonical	1	32	junction_8	23.507269428335	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTGGGTTTTGTGTACT	NA	False	NA	-2	True	AATAAA	-20	NA	108158293	108090099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108093392_108094538_108094637_108099017_108099071_108099196_108099395_108101922_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ENSMUST00000043624.9	chr11	-	10546	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_26	15.4932381399703	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGGTGTCTCATTCTGT	9156	False	NA	0	True	AATAAA	-18	NA	86248428	86157858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ENSMUST00000043624.9-0	chr11	-	7859	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	-694	3381	-694	2133	multi-exon	FALSE	canonical	3	30	junction_26	15.4932381399703	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTAGAGTATTATT	8462	False	NA	NA	False	ATTAAA	-14	NA	86249122	86161239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ENSMUST00000043627.8	chr11	+	1316	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGTGTAACCCTGGCC	8955	False	NA	NA	False	NA	NA	NA	120375438	120379891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ENSMUST00000043627.8-0	chr11	+	947	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	0	369	0	239	multi-exon	FALSE	canonical	3	1076	junction_2	33.5186515241887	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAATGAGTGGTGTGTG	8955	False	NA	24	True	AATATA	-16	NA	120375438	120379522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ENSMUST00000043637.14	chr6	+	4881	10	FSM	ENSMUSG00000035158.16	ENSMUST00000043637.14	4881	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	22.5738841787048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTTGACCAGTTGTG	NA	False	NA	5	True	ATTAAA	-16	NA	97784018	97998310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_97784249_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
ENSMUST00000043650.8	chr5	+	2930	3	FSM	ENSMUSG00000041930.8	ENSMUST00000043650.8	2930	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	5	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTCAGCTGTGGGTT	NA	False	NA	12	True	AAGAAA	-17	NA	114706076	114751281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114706486_114732401_114732529_114748887
ENSMUST00000043654.10	chr11	+	1754	11	FSM	ENSMUSG00000045007.10	ENSMUST00000043654.10	1754	11	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_5	90.3044295702044	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGCTTTGTTTGTGACT	1651	False	NA	NA	False	AATAAA	-22	NA	101046732	101052613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101046995_101047273_101047387_101047578_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
ENSMUST00000043674.15	chr17	-	4425	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGGTCTCGTGAAGCGT	1761	False	NA	NA	False	AATAAA	-37	NA	35978484	35966525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ENSMUST00000043674.15-0	chr17	-	3669	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	0	756	0	0	multi-exon	FALSE	canonical	0	0	junction_15	44.4260449442414	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGCAAGTGTGAGCCT	1761	False	NA	-8	True	GATAAA	-13	NA	35978484	35967281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ENSMUST00000043675.9	chr9	-	544	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	4613	junction_2	56	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGTTGTCTTTGGCTTT	NA	False	NA	24	True	NA	NA	NA	44832040	44824514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44824765_44825948_44826110_44831907
ENSMUST00000043680.9	chr11	+	1802	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_8	104.461715475096	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1230	False	NA	16	True	AATAAA	-19	NA	101010763	101017245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ENSMUST00000043707.7	chr5	+	4207	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCTCAGTGAATAAAGT	NA	False	NA	NA	False	AATAAA	-23	NA	135661471	135675230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ENSMUST00000043707.7-0	chr5	+	1872	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	105	2230	0	-381	multi-exon	FALSE	canonical	3	209	junction_1	25.703436864876	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGTGGCATACTG	NA	False	NA	15	True	TATAAA	-19	NA	135661576	135673000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ENSMUST00000043716.9	chr12	-	2029	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCCTGTCTCAGCCT	3349	False	NA	NA	False	TATAAA	-29	NA	110855579	110839043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUST00000043716.9-0	chr12	-	1456	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	21	552	0	0	multi-exon	FALSE	canonical	3	237	junction_1	85.0951673128386	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3370	False	NA	-10	True	NA	NA	NA	110855558	110839595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUST00000043735.8	chr10	+	3535	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_27	66.4418431300526	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAGCTAGTAAAGCCA	NA	False	NA	14	True	AATAAA	-19	NA	3923143	4106111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ENSMUST00000043757.15	chr17	-	3161	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	0	0	0	0	multi-exon	FALSE	canonical	3	801	junction_12	70.1887066803097	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280653	36267710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ENSMUST00000043760.15	chr5	+	1660	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_10	13.5410487038486	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGCCCTGTGGGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	114582366	114598652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUST00000043765.14	chr7	-	3354	15	FSM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_14	237.54999473795	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGAGTCGTGGTAGTT	9549	False	NA	NA	False	NA	NA	NA	25454175	25420906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453871
ENSMUST00000043767.9	chr8	+	2057	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCATCTTGTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	13835614	13849193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUST00000043767.9-0	chr8	+	1551	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	30	476	0	-476	multi-exon	FALSE	canonical	3	271	junction_6	38.5873603010105	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATCAGGTTTTTTGTT	NA	False	NA	6	True	AATAAA	-19	NA	13835644	13848717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUST00000043775.9	chr18	+	6363	24	FSM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	44.6966672190611	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTTGATCTCCAATAT	NA	False	NA	NA	False	NA	NA	NA	34910099	34971713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ENSMUST00000043805.15	chr9	-	2232	11	FSM	ENSMUSG00000039048.16	ENSMUST00000043805.15	2232	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	62.4467773387867	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122276	35115503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35116438_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ENSMUST00000043812.15	chr3	-	5590	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	0	617	0	-617	multi-exon	FALSE	canonical	3	374	junction_13	40.9391451479165	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGGTTTTAAGTTTT	NA	False	NA	-3	True	NA	NA	NA	142587765	142497279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ENSMUST00000043813.3	chr14	-	3579	5	FSM	ENSMUSG00000033405.5	ENSMUST00000043813.3	3579	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.75640815054393	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTCAGAGACTTAATTG	NA	False	NA	NA	False	AATAAA	-21	NA	73785682	73756316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_73759115_73760737_73760935_73762499_73762757_73769507_73769626_73785473
ENSMUST00000043814.5	chr10	-	3282	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_19	28.6394298502739	847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	False	NA	-25	True	AATAAA	-17	NA	41179256	41064167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUST00000043815.16	chr6	+	6412	43	FSM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	0	0	0	0	multi-exon	FALSE	canonical	2	193	junction_5	62.1117418909309	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGTGTGGTCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	35154364	35224531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ENSMUST00000043822.8	chr7	-	1662	12	FSM	ENSMUSG00000040525.14	ENSMUST00000043822.8	1662	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	3.71283233757493	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCCGTGTGTGACAGAG	NA	False	NA	1	True	AATAAA	-20	NA	19530734	19513642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19513722_19514697_19514773_19514894_19515002_19518727_19518806_19519162_19519325_19520107_19520240_19522893_19522982_19524324_19524463_19526032_19526155_19526433_19526591_19526733_19526881_19530357
ENSMUST00000043836.8	chr2	+	3552	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	7.40870359029762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTGTATTATTTGGT	NA	False	NA	NA	False	AATAAA	-22	NA	140237354	140264874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ENSMUST00000043839.5	chr1	+	2518	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTATGTTTTTTTTT	NA	False	NA	23	True	ATTAAA	-23	NA	171265102	171292171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
ENSMUST00000043839.5-0	chr1	+	1884	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	44	590	0	368	multi-exon	FALSE	canonical	1	67	junction_8	70.6616000978966	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGTTGAACATGGAA	NA	False	NA	18	True	AATAAA	-20	NA	171265146	171291581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
ENSMUST00000043843.12	chr11	+	3540	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_6	89.534754270184	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	4456	False	NA	10	True	AATAAA	-21	NA	97690390	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ENSMUST00000043848.11	chr6	-	4629	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_21	78.9640126675822	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3395	False	NA	-9	True	AATAAA	-20	NA	125168664	125144969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ENSMUST00000043864.9	chr2	-	1827	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTGCTCTCTGGTTC	NA	False	NA	NA	False	AATAAA	-14	NA	5849975	5799104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUST00000043864.9-0	chr2	-	1233	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	223	371	0	0	multi-exon	FALSE	canonical	3	980	junction_5	82.7531050105607	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849752	5799475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUST00000043866.8	chr10	+	6590	46	FSM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_25	12.2237574793343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGGCCACGGCTGAG	7131	False	NA	6	True	AATAAA	-15	NA	79833448	79851402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ENSMUST00000043867.11	chr3	+	552	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	2670.46824857864	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACATGTATGGTTCA	NA	False	NA	10	True	AATAAA	-15	NA	28859584	28861564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
ENSMUST00000043867.11-0	chr3	+	485	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	74	-7	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	2670.46824857864	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	17	True	AATAAA	-22	NA	28859658	28861571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
ENSMUST00000043881.12	chr10	+	5437	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_11	110.864375352149	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGCTGGTCTCTGTTTGC	2805	False	NA	14	True	AATAAA	-15	NA	20188229	20218245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUST00000043897.16	chr17	-	3189	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	5687	False	NA	0	True	NA	NA	NA	26063825	26057430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ENSMUST00000043897.16-0	chr17	-	2526	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	282	381	0	0	multi-exon	FALSE	canonical	3	133	junction_18	11.3871272350258	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGGATTTTGATCTCT	5969	False	NA	-2	True	ATTAAA	-19	NA	26063543	26057811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ENSMUST00000043898.8	chr7	-	708	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	125.517595048131	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTTCTTGGGATCTT	1290	False	NA	-5	True	AATAAA	-17	NA	30262666	30261289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
ENSMUST00000043907.14	chr17	+	918	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_1	12	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGGTTTCATTACA	NA	False	NA	16	True	AATAAA	-16	NA	25114089	25115263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25114463_25114635_25114679_25114761
ENSMUST00000043911.8	chr9	+	1683	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_6	22.3469853694417	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	False	NA	19	True	AATAAA	-28	NA	20779937	20785603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ENSMUST00000043914.8	chr14	+	2674	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCAGTTCTATTGCACT	NA	False	NA	17	True	AATAAA	-17	NA	65187493	65277281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUST00000043922.7	chr9	-	2108	9	FSM	ENSMUSG00000038895.17	ENSMUST00000043922.7	2108	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	12.3129758791285	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9457	False	NA	-1	True	ATTAAA	-22	NA	21982641	21966755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968975_21969099_21969712_21976996_21977213_21979443_21979488_21982344
ENSMUST00000043929.11	chr18	+	1618	11	FSM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.64869932417586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	3	True	AATAAA	-14	NA	70058536	70102555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ENSMUST00000043931.9	chr11	-	625	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	0	0	0	0	multi-exon	FALSE	canonical	3	1974	junction_5	551.930285452792	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115310788	115306514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUST00000043937.9	chr3	-	1067	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	0	0	0	0	multi-exon	FALSE	canonical	3	1781	junction_1	135.7063823931	711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACTTTTTGTTGT	NA	False	NA	1	True	AATAAA	-24	NA	130503093	130489560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ENSMUST00000043938.8	chr17	+	4185	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	9.88736567544662	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATAGCAGTACATGCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	50816430	50995512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ENSMUST00000043951.10	chr1	-	3248	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749089	36737194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ENSMUST00000043951.10-0	chr1	-	2097	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	61	1090	0	-1090	multi-exon	FALSE	canonical	3	484	junction_1	31.3043128019128	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCGGTGTGTGGCTCT	NA	False	NA	-21	True	TATAAA	-24	NA	36749028	36738284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ENSMUST00000043961.12	chr11	-	8231	39	FSM	ENSMUSG00000018800.15	ENSMUST00000043961.12	8231	39	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	4.33987183389395	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGACTTCAGTTTGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	110228504	110160194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228310
ENSMUST00000043962.9	chr8	+	2301	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_10	60.600055957127	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807675	13831938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ENSMUST00000043964.13	chr5	-	3787	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_7	10.259888211986	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTTCTGGTTTGAT	NA	False	NA	1	True	AATAAA	-18	NA	37146549	37123447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ENSMUST00000043966.8	chr3	-	3364	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATTCTCAAAAGTTCCT	NA	False	NA	NA	False	TATAAA	-14	NA	32791296	32779545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ENSMUST00000043966.8-0	chr3	-	864	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	399	2101	399	77	multi-exon	FALSE	canonical	3	685	junction_5	35.1931180141168	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGTTGTTCTTCTAGC	NA	False	NA	-12	True	TATAAA	-20	NA	32790897	32781646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ENSMUST00000043975.11	chr7	-	998	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	22.8363744933385	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATCTCAAGTGCATTTA	4885	False	NA	-6	True	NA	NA	NA	30259071	30254865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ENSMUST00000043983.11	chr3	+	7371	11	FSM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	19.1627242322171	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTGCCACATGCTGAA	252	False	NA	14	True	NA	NA	NA	101284398	101370375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ENSMUST00000043990.14	chr9	+	5708	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGACTCCAACTGATTCT	NA	False	NA	NA	False	GATAAA	-16	NA	57615822	57659782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ENSMUST00000043990.14-0	chr9	+	3342	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	27	2339	0	-1243	multi-exon	FALSE	canonical	3	211	junction_3	27.6189347288333	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCTTCCTAGAGTGAA	NA	False	NA	13	True	AATAAA	-23	NA	57615849	57657443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ENSMUST00000044005.14	chr16	+	2778	11	FSM	ENSMUSG00000039200.17	ENSMUST00000044005.14	2778	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	27.1632104140877	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010575	10060915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10059409
ENSMUST00000044007.3	chr11	-	813	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCAGGGGCTTTTGTGT	959	False	NA	-6	True	AATAAA	-18	NA	120348894	120347431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120347989_120348638
ENSMUST00000044009.14	chr2	-	6962	11	FSM	ENSMUSG00000039145.17	ENSMUST00000044009.14	6962	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	11.2977873939989	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTTGTCTGTTTCCTA	NA	False	NA	1	True	AATAAA	-21	NA	5719326	5298267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5718956
ENSMUST00000044011.12	chr2	+	1658	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	209.807501057517	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGAGGTTGC	NA	False	NA	25	True	AATAAA	-26	NA	151384402	151403612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ENSMUST00000044019.16	chr6	+	2412	11	FSM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	19.246038553427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	9924	False	NA	NA	False	AATAAA	-17	NA	90581706	90623394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
ENSMUST00000044021.12	chr1	+	3571	6	FSM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	19.417517864032	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTATTTTGAGTTCATC	NA	False	NA	29	True	AATAAA	-31	NA	164076614	164092954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUST00000044038.10	chr2	-	1876	13	FSM	ENSMUSG00000039648.15	ENSMUST00000044038.10	1876	13	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	20.7811011899434	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCAGCTTCTCTCTTCCTTT	NA	False	NA	-3	True	AATAAA	-25	NA	30095859	30075135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
ENSMUST00000044043.3	chr13	-	390	1	FSM	ENSMUSG00000079941.2	ENSMUST00000044043.3	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGTGTTATCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	21685588	21685198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21685200_21685600
ENSMUST00000044048.8	chr7	+	1363	3	FSM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTATGTCTGGGCCAG	NA	False	NA	12	True	AATAAA	-20	NA	30252692	30254868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30252958_30253686_30253810_30253893
ENSMUST00000044051.6	chr9	+	518	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTCTTCTAAATCCC	8813	False	NA	21	True	AATAAA	-15	NA	50515209	50516620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50515340_50516232
ENSMUST00000044053.13	chr10	+	6907	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	43	2321	0	977	multi-exon	FALSE	canonical	3	69	junction_26	12.375515699268	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025216	11091018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ENSMUST00000044058.11	chr4	+	3733	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTTGTGGCTGGAT	NA	False	NA	24	True	NA	NA	NA	138161981	138169576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ENSMUST00000044058.11-0	chr4	+	1324	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	52	2357	0	897	multi-exon	FALSE	canonical	3	201	junction_3	1.24721912892465	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCCTCTCCGACTCT	NA	False	NA	19	True	NA	NA	NA	138162033	138167219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ENSMUST00000044068.10	chr16	+	4178	17	FSM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	0	0	0	0	multi-exon	TRUE	non_canonical	1	193	junction_4	108.324454764379	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGGTAACTGAAAGTTA	974	False	NA	15	True	AATAAA	-26	NA	93629008	93672960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ENSMUST00000044081.9	chr13	-	3994	13	FSM	ENSMUSG00000034575.14	ENSMUST00000044081.9	3994	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	10.3077640640442	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACTTTTCCTCTGAAGG	NA	False	NA	-16	True	AATAAA	-12	NA	69681983	69646080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ENSMUST00000044103.6	chr16	+	524	3	FSM	ENSMUSG00000039209.13	ENSMUST00000044103.6	805	3	0	281	0	0	multi-exon	FALSE	canonical	3	487	junction_1	5	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGTGTTACAACTT	NA	False	NA	29	True	AATAAA	-29	NA	9988091	9992494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_9988189_9988278_9988356_9992144
ENSMUST00000044106.6	chr8	-	1581	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	2367	junction_5	170.70409745782	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	False	NA	-6	True	ATTAAA	-14	NA	108315096	108307012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ENSMUST00000044111.10	chr7	+	995	6	FSM	ENSMUSG00000038387.10	ENSMUST00000044111.10	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	17.1860408471527	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGATGCTTTTTATTTGA	NA	False	NA	9	True	AATAAA	-17	NA	44667384	44671071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
ENSMUST00000044113.12	chr15	-	13800	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_13	10.6510302057803	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAAGGTGTCCAGTTAC	4444	False	NA	-24	True	AATAAA	-35	NA	73056784	72967692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ENSMUST00000044113.12-0	chr15	-	3538	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	0	10262	0	1227	multi-exon	FALSE	canonical	3	61	junction_13	10.6510302057803	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTGTTAATGTCTTTA	4444	False	NA	-10	True	GATAAA	-16	NA	73056784	72977954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ENSMUST00000044116.14	chr3	+	3770	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	65.469339197826	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	False	NA	21	True	AATAAA	-22	NA	55019528	55044743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUST00000044138.8	chrX	+	2206	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTATCTAGTGGTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	19925798	19963760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_19927448_19963203
ENSMUST00000044148.3	chr4	-	3021	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	-17	True	NA	-2	True	AATAAA	-15	NA	47474333	47469832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_47472459_47473938
ENSMUST00000044152.13	chr11	-	3236	19	FSM	ENSMUSG00000034586.15	ENSMUST00000044152.13	3236	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	3.67045259092421	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTGTCTCTGTACAT	8697	False	NA	0	True	AATAAA	-15	NA	115258545	115238532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250635_115251147_115251319_115252464_115252615_115258369
ENSMUST00000044155.15	chr9	-	3528	14	FSM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	292	2534	-268	1089	multi-exon	FALSE	canonical	0	0	junction_12	2.76067052998867	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCCATATCCATGTCGAT	6654	False	NA	NA	False	AATAAA	-18	NA	41069066	40924927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962612_40962667_41068594
ENSMUST00000044158.13	chr7	-	1521	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	0	1655	0	0	multi-exon	FALSE	canonical	3	1334	junction_1	195.89089579548	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679999	15671762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ENSMUST00000044163.10	chr6	-	3337	11	FSM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	56.4779603031129	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATGATGCTAATGTTA	7655	False	NA	NA	False	AATAAA	-11	NA	35110650	35021889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUST00000044165.14	chr9	+	3740	28	FSM	ENSMUSG00000039115.14	ENSMUST00000044165.14	7020	28	0	3280	0	0	multi-exon	TRUE	canonical	2	4	junction_19	2.10688335604858	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAATAGTTCTATAAT	NA	False	NA	NA	False	NA	NA	NA	118435757	118726791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_118436184_118455515_118455644_118457206_118457314_118465570_118465695_118481564_118481633_118487533_118487664_118490415_118490502_118492937_118493007_118497679_118497818_118500766_118500873_118501877_118501973_118510003_118510095_118510802_118510849_118518337_118518493_118527381_118527543_118598159_118598310_118613169_118613247_118636232_118636384_118661801_118661889_118663363_118663444_118670160_118670251_118672556_118672666_118679766_118679875_118698358_118698485_118700888_118701009_118706189_118706292_118716831_118716952_118726301
ENSMUST00000044166.9	chr10	-	3534	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_10	18.6027208894236	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGAGTTCATTGTG	NA	False	NA	-3	True	AATAAA	-19	NA	40759307	40707616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ENSMUST00000044189.16	chr15	-	6575	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTGGACTCAATACTAT	5968	False	NA	2	True	AATAAA	-36	NA	97991625	97936624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ENSMUST00000044189.16-0	chr15	-	3713	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	374	2488	0	0	multi-exon	FALSE	canonical	3	84	junction_17	35.6797559226372	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	6342	False	NA	-4	True	AATAAA	-13	NA	97991251	97939112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ENSMUST00000044195.6	chr7	-	4546	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	12.8571640211466	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTGGGTGCGTGTTG	4144	False	NA	-2	True	AATAAA	-18	NA	118183959	118135063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ENSMUST00000044200.11	chr6	+	2597	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	206.283558885983	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUST00000044207.5	chr19	-	2555	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	0	2536	0	0	multi-exon	FALSE	canonical	3	368	junction_1	46.7672968579718	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9040	False	NA	-8	True	AATAAA	-19	NA	5438731	5430086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ENSMUST00000044220.11	chr9	-	1169	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_1	9.03081145609604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAAGGCAAGATTTAAC	NA	False	NA	NA	False	ATTAAA	-17	NA	117979245	117893589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ENSMUST00000044220.11-0	chr9	-	482	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	114	573	100	0	multi-exon	FALSE	canonical	3	173	junction_1	9.03081145609604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGAGTTCTGATTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	117979131	117894162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ENSMUST00000044224.5	chr5	+	2021	6	FSM	ENSMUSG00000032623.10	ENSMUST00000044224.5	2021	6	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	11.5654658358408	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTAATTTATTCTCCC	NA	False	NA	19	True	ATTAAA	-25	NA	121052598	121059715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121053130_121053724_121054014_121054901_121055099_121057064_121057298_121057959_121058114_121059098
ENSMUST00000044234.14	chr4	+	5744	9	FSM	ENSMUSG00000007613.16	ENSMUST00000044234.14	2861	9	-85	-2798	0	0	multi-exon	FALSE	canonical	3	99	junction_2	41.6435769357052	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAACATTCTTTTCTGGA	0	True	NA	33	True	AATAAA	-24	NA	47353221	47414931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_47353397_47383748_47383995_47393258_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ENSMUST00000044250.4	chr11	+	5730	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTTTGAGTTTTT	NA	False	NA	4	True	NA	NA	NA	60428803	60449338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ENSMUST00000044250.4-1	chr11	+	3426	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	-300	2604	-300	1541	multi-exon	FALSE	canonical	3	390	junction_2	6.48074069840786	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGTCTGATGCTGTGGT	NA	False	NA	16	True	AATAAA	-25	NA	60428503	60446734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ENSMUST00000044252.7	chr17	-	1427	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_4	56.4111888034831	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	False	NA	-6	True	AGTAAA	-24	NA	25105322	25101585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUST00000044260.11	chr1	-	7111	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_8	42.9588980155981	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74544962	74474669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ENSMUST00000044271.15	chr11	-	4121	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGCTCCCAGTGCATT	NA	False	NA	-8	True	AATAAA	-16	NA	120328534	120271195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ENSMUST00000044271.15-0	chr11	-	3697	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	0	424	0	-424	multi-exon	FALSE	canonical	3	355	junction_10	42.5235229020362	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGTTTTGAGTTACTCT	NA	False	NA	-5	True	AAGAAA	-19	NA	120328534	120271619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ENSMUST00000044277.10	chr2	+	1616	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTGTGTGTTCAGTCAAT	NA	False	NA	30	True	ATTAAA	-22	NA	154498937	154536705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
ENSMUST00000044277.10-0	chr2	+	1112	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	0	504	0	0	multi-exon	FALSE	canonical	3	34	junction_1	13.5738719604982	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGCTAAGCCCACTGCT	NA	False	NA	25	True	AATAAA	-33	NA	154498937	154536201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
ENSMUST00000044286.6	chr8	-	1737	11	FSM	ENSMUSG00000039199.7	ENSMUST00000044286.6	1737	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	4.06078810084939	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCAATATCCGCTCCAC	NA	False	NA	NA	False	NA	NA	NA	106210982	106199112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820
ENSMUST00000044326.5	chr17	+	1290	2	FSM	ENSMUSG00000039269.6	ENSMUST00000044326.5	1290	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTCCGCGTCAGTTTC	3249	False	NA	NA	False	AATAAA	-23	NA	35878346	35879849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35878518_35878730
ENSMUST00000044332.16	chr15	-	1993	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	240	2285	240	-1093	multi-exon	FALSE	canonical	3	13	junction_10	4.62105687767059	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACAGCTTTGTCAACA	NA	False	NA	NA	False	NA	NA	NA	86070102	86025614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
ENSMUST00000044352.8	chr12	+	4300	11	FSM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	24.633513756669	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCTTTGTGTTTAGA	NA	False	NA	NA	False	AATAAA	-16	NA	72583156	72626893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ENSMUST00000044355.11	chr7	-	736	6	FSM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	0	0	0	0	multi-exon	FALSE	canonical	3	1985	junction_1	35.4028247460566	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGATGTTTATTTTGGCT	NA	False	NA	-11	True	AATAAA	-21	NA	15656327	15651132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
ENSMUST00000044369.13	chr1	+	2049	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	59.3277926628703	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGATGATGAGAAGT	NA	False	NA	98	True	AATAAA	-37	NA	5153302	5232752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUST00000044373.6	chr3	-	2162	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	17.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTCTGCTGTACTTATTT	NA	False	NA	0	True	ATTAAA	-21	NA	54715212	54710535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54711997_54712780_54712889_54714619
ENSMUST00000044373.6-0	chr3	-	1056	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	0	1106	0	0	multi-exon	FALSE	canonical	3	271	junction_1	17.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATATTGAATTTTT	NA	False	NA	-28	True	NA	NA	NA	54715212	54711641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54711997_54712780_54712889_54714619
ENSMUST00000044384.5	chr4	+	2298	2	FSM	ENSMUSG00000035561.6	ENSMUST00000044384.5	2298	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTATCACTGTTTTCCTT	-15	True	NA	12	True	ATTAAA	-26	NA	45799021	45804604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45799170_45802454
ENSMUST00000044385.14	chr13	+	3048	11	FSM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	16.2775919595006	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATTTTCTTTCCAGTCA	NA	False	NA	NA	False	NA	NA	NA	104246248	104278243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ENSMUST00000044392.11	chr3	+	1703	14	FSM	ENSMUSG00000040213.14	ENSMUST00000044392.11	4206	14	-29	2532	0	0	multi-exon	FALSE	canonical	3	21	junction_2	23.3184793520062	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTGTTGTACTTTC	NA	False	NA	23	True	AATACA	-37	NA	142406811	142450099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_142406937_142412449_142412557_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ENSMUST00000044415.16	chr2	+	2467	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_9	24.2330284822489	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTACCTGTGATTCCTGG	NA	False	NA	NA	False	CATAAA	-14	NA	173952141	173964863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
ENSMUST00000044423.4	chr11	-	6931	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGTCCGATGACTT	NA	False	NA	NA	False	AATAAA	-14	NA	86092019	85948963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ENSMUST00000044423.4-0	chr11	-	3867	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	0	3064	0	-3064	multi-exon	FALSE	canonical	3	63	junction_1	12.1006856333757	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTCTTCATTGGAAT	NA	False	NA	-24	True	GATAAA	-22	NA	86092019	85952027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ENSMUST00000044442.10	chr17	-	4235	20	FSM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_15	41.2008794247642	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940430	46875396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ENSMUST00000044443.15	chr3	-	5775	25	FSM	ENSMUSG00000032826.20	ENSMUST00000044443.15	5775	25	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_24	9.47034846243791	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCAGTGGTGGTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	126792111	126715260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126791972
ENSMUST00000044454.12	chr9	+	3396	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	57.0105611411838	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTATTTTGTGATTCA	9585	False	NA	4	True	AATATA	-18	NA	117869566	117892907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ENSMUST00000044455.8	chr1	-	6321	4	FSM	ENSMUSG00000042197.14	ENSMUST00000044455.8	11876	4	0	5555	0	-5555	multi-exon	FALSE	canonical	3	15	junction_1	149.247743329301	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGGAGTCCCATTTTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	33853651	33836771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_33842695_33844419_33844501_33852807_33852892_33853418
ENSMUST00000044466.12	chr7	+	3778	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATACTGTTTGCGCTTCTT	7342	False	NA	NA	False	ATTAAA	-23	NA	96600711	96713965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ENSMUST00000044466.12-0	chr7	+	2459	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	57	1262	0	524	multi-exon	FALSE	canonical	3	94	junction_6	11.3976017408833	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAGTTATTTTTAAA	7399	False	NA	10	True	ATTAAA	-22	NA	96600768	96712703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ENSMUST00000044475.5	chrX	+	5384	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	118.587682955494	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683669	100727957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ENSMUST00000044478.7	chr1	+	1830	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	8.39836557781919	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTTCTGTCTCCAGAA	NA	False	NA	NA	False	AAAAAG	-12	NA	52884204	52960145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
ENSMUST00000044484.13	chrX	+	5918	29	FSM	ENSMUSG00000037369.18	ENSMUST00000044484.13	5918	29	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_13	32.5682955886706	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGACTCATCATTTTTT	NA	False	NA	NA	False	AATACA	-17	NA	18028813	18146175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUST00000044503.14	chr17	-	3026	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	0	1003	0	0	multi-exon	FALSE	canonical	3	80	junction_4	9.91071249821234	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGGTGAGAAGTATT	NA	False	NA	-28	True	AATAAA	-13	NA	50497702	50300287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
ENSMUST00000044507.12	chr11	-	3370	13	FSM	ENSMUSG00000034570.13	ENSMUST00000044507.12	3370	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	1.60511335702152	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCCTGACTTGTTAGC	NA	False	NA	NA	False	ATTAAA	-21	NA	3454821	3444374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3445167_3445346_3445452_3445559_3445638_3445784_3445923_3449596_3449781_3449890_3450001_3450137_3450250_3450573_3450750_3451045_3451163_3451319_3451429_3451524_3451639_3451986_3453144_3454643
ENSMUST00000044509.7	chrX	-	2696	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	16.4189930669738	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCTTGGAGTCTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	151125421	151119850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
ENSMUST00000044524.16	chr15	+	1555	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	1.69967317119759	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCTCTTACGGTTCAG	-9	True	NA	21	True	AATAAA	-21	NA	31224459	31274487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
ENSMUST00000044530.3	chr11	+	3517	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	9.20923449587424	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTATTGGTTTCCTA	NA	False	NA	35	True	AATAAA	-37	NA	75239258	75296531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ENSMUST00000044551.8	chr9	+	6560	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	0	0	0	0	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGACTAGAATTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	78020596	78079389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ENSMUST00000044551.8-0	chr9	+	2391	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	0	4169	0	0	multi-exon	FALSE	canonical	2	83	junction_12	10.9192842819834	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGGTCTCATTATTT	NA	False	NA	3	True	TATAAA	-14	NA	78020596	78075220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ENSMUST00000044564.15	chr4	+	4789	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	28.6078611962206	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396857	119486316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ENSMUST00000044567.4	chr3	+	1471	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTCTTCCTTG	NA	False	NA	18	True	AATAAA	-22	NA	54642959	54657216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUST00000044567.4-0	chr3	+	1119	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	20	332	0	-332	multi-exon	FALSE	canonical	3	432	junction_5	39.5777091521022	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCTATGAGGAGACCAC	NA	False	NA	47	True	NA	NA	NA	54642979	54656884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUST00000044579.12	chr5	-	1323	8	FSM	ENSMUSG00000033467.13	ENSMUST00000044579.12	1323	8	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_7	229.794229159703	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCGGCCAGCCATCAT	NA	False	NA	-11	True	NA	NA	NA	109706859	109702578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706670
ENSMUST00000044581.14-1	chr1	-	3406	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	-174	6327	-174	2052	multi-exon	FALSE	canonical	3	58	junction_2	7.73045923603508	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTGTGTTTGTACTTTA	NA	False	NA	-4	True	CATAAA	-10	NA	151966050	151766601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
ENSMUST00000044608.14	chr13	+	5019	19	FSM	ENSMUSG00000038518.16	ENSMUST00000044608.14	5019	19	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	177.530035712966	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCATCCCTTTTGTAC	9933	False	NA	NA	False	NA	NA	NA	44884298	45074471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_44884411_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ENSMUST00000044620.11	chr5	+	10724	27	FSM	ENSMUSG00000041147.11	ENSMUST00000044620.11	10724	27	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	37.750504522668	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTACTGGCTAAGTATGG	370	False	NA	12	True	AATAAA	-21	NA	150446094	150493211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_150446556_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUST00000044622.7	chr18	+	9660	44	FSM	ENSMUSG00000039840.9	ENSMUST00000044622.7	9660	44	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_24	5.20286146671814	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGAATCCGAATTGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	77981679	78078228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77981775_77991364_77992298_77994363_77994608_77997375_77997513_77997947_77998056_77999121_77999196_78000621_78000728_78002244_78002360_78002694_78002846_78003921_78004078_78005595_78005754_78008115_78008271_78011751_78011893_78015709_78015875_78018193_78018314_78019051_78019309_78022338_78022480_78024155_78024301_78024512_78024711_78025522_78025634_78026685_78026806_78028255_78028423_78029600_78029823_78031478_78031603_78034560_78034706_78038726_78038899_78040421_78040585_78052784_78052928_78054048_78054206_78055915_78056111_78057205_78057420_78057953_78058103_78058893_78059096_78060866_78060940_78062429_78062537_78063952_78064129_78065865_78066052_78066491_78066702_78067140_78067286_78070471_78070715_78071977_78072195_78073183_78073400_78073555_78073671_78076139
ENSMUST00000044638.13	chr2	+	3731	9	FSM	ENSMUSG00000027522.16	ENSMUST00000044638.13	3731	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	40.7076083183476	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATTCCTAGTATTA	NA	False	NA	125	True	AATAAA	-23	NA	173918850	173941563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_173918983_173919130_173919146_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ENSMUST00000044642.14	chr5	-	3346	17	FSM	ENSMUSG00000036718.18	ENSMUST00000044642.14	3346	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	4.83476990145343	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTTGCCTGTGTGTGTC	NA	False	NA	-4	True	AATAAA	-15	NA	139722091	139692450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
ENSMUST00000044660.6	chr7	+	3834	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127836528	127844272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
ENSMUST00000044660.6-1	chr7	+	3071	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	763	0	763	0	multi-exon	FALSE	canonical	3	88	junction_1	5.30659966456864	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127837291	127844272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
ENSMUST00000044672.11	chr10	+	5807	13	FSM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	6.08447477875727	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225303	40359814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ENSMUST00000044672.11-0	chr10	+	4061	13	FSM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	29	1717	0	0	multi-exon	FALSE	canonical	3	22	junction_12	6.08447477875727	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTATGTATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	40225332	40358097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ENSMUST00000044673.9	chr4	+	2064	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAAAAAACTGAATA	NA	False	NA	NA	False	ATTAAA	-25	NA	45297126	45316131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUST00000044673.9-1	chr4	+	1394	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	28	642	0	347	multi-exon	FALSE	canonical	3	203	junction_1	41.8103979292233	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGATTTCCACCAGCT	-8	True	NA	12	True	CATAAA	-21	NA	45297154	45315489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUST00000044675.5	chr2	+	1373	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	32.3128836376389	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857963	119863075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ENSMUST00000044681.7	chr6	+	1442	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	50	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTCTATATGGCACAT	8448	False	NA	10	True	AATAAA	-21	NA	97187649	97210276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_97187958_97206497_97206716_97209360
ENSMUST00000044684.14	chr5	-	3689	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	11.2714232774287	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGGGTGATTAAGTCTA	NA	False	NA	5	True	ATTAAA	-26	NA	100946464	100910010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ENSMUST00000044691.9	chr1	-	1860	3	FSM	ENSMUSG00000042215.9	ENSMUST00000044691.9	1860	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	4.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAGCATTGGCCATTAT	NA	False	NA	-5	True	NA	NA	NA	33796876	33784564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_33786098_33787297_33787408_33796659
ENSMUST00000044721.13	chr11	+	4008	22	FSM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_19	48.1567734584863	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900277	100954545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
ENSMUST00000044746.5	chr5	-	1376	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTTGTATGTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	3943933	3940580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3941898_3943874
ENSMUST00000044752.6	chr17	-	1023	3	FSM	ENSMUSG00000039481.6	ENSMUST00000044752.6	1023	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCTGGTCGTTCATGC	NA	False	NA	-3	True	CATAAA	-15	NA	57064530	57058324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57058831_57059308_57059491_57064195
ENSMUST00000044766.15	chr2	-	6628	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTCTCTGCCTGTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	130682054	130548119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ENSMUST00000044766.15-0	chr2	-	5000	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	-3	1631	0	1299	multi-exon	FALSE	canonical	3	25	junction_2	14.9720933822533	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAGAAGGAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	130682057	130549750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ENSMUST00000044776.13	chr10	+	2573	18	FSM	ENSMUSG00000044005.14	ENSMUST00000044776.13	2573	18	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	13.3766309680488	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATTTTTATTTTATAT	NA	False	NA	10	True	AATAAA	-16	NA	128030325	128045808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUST00000044790.12	chr5	-	3016	10	FSM	ENSMUSG00000042002.12	ENSMUST00000044790.12	3016	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	3.91893157523298	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGACTCAGTGTGGA	NA	False	NA	-2	True	AATAAA	-13	NA	114411868	114392224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114393812_114394619_114395013_114396568_114396777_114397810_114397908_114398410_114398539_114398926_114399047_114399135_114399264_114401069_114401216_114411033_114411123_114411748
ENSMUST00000044795.8	chr8	-	3631	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	0	2177	0	-2177	multi-exon	TRUE	canonical	3	328	junction_14	43.1434815470425	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124676004	124626038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ENSMUST00000044812.12	chr1	+	1639	6	FSM	ENSMUSG00000039210.17	ENSMUST00000044812.12	1639	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	31.740195336513	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTATGGTTTATTTTAA	NA	False	NA	NA	False	AAGAAA	-11	NA	186947740	186966614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966150
ENSMUST00000044823.4	chr4	+	5582	14	FSM	ENSMUSG00000033948.4	ENSMUST00000044823.4	5582	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.89203404328416	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTGTGTTCTCTCAGTA	NA	False	NA	NA	False	AATAAA	-34	NA	116734572	116846461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116735261_116808021_116808379_116815874_116816024_116819706_116819858_116822792_116822973_116830067_116830245_116832392_116832540_116833033_116833172_116836620_116836882_116837081_116837218_116837971_116838130_116841879_116842044_116842878_116842961_116843667
ENSMUST00000044825.5	chr2	+	1166	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_10	17.7042367810646	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGTTTGAAGCAAGGTG	NA	False	NA	10	True	AATAAA	-21	NA	140012568	140045609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUST00000044844.9	chr10	+	3971	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_9	22.6077666104176	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTCAACCCTTTACAG	822	False	NA	30	True	AATAAA	-21	NA	81193324	81202059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ENSMUST00000044851.8	chr18	+	2286	4	FSM	ENSMUSG00000102428.2	ENSMUST00000044851.8	5080	4	2794	0	2601	0	multi-exon	FALSE	canonical	3	109	junction_1	53.597263611743	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37901426	37974926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_37901594_37958073_37958133_37966317_37966407_37972955
ENSMUST00000044857.4	chr8	+	2000	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	211	335	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGGCTATTATTATTG	NA	False	NA	14	True	NA	NA	NA	3726509	3730920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3726604_3729014
ENSMUST00000044858.16	chr17	+	2627	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	51.2967642711639	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATTTTCTGGACTGAG	NA	False	NA	19	True	CATAAA	-19	NA	34250785	34257371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ENSMUST00000044911.10	chr17	-	1264	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	408	131	0	0	multi-exon	FALSE	canonical	3	1378	junction_3	85.5336191213724	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6753	False	NA	-19	True	AATAAA	-15	NA	26051927	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUST00000044923.15	chr12	-	2850	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_8	40.7106788815908	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	NA	False	NA	-12	True	ATTAAA	-20	NA	103392078	103374240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ENSMUST00000044949.11	chr11	-	2139	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	23.7876893931854	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTTTGGTGGAAGTCA	NA	False	NA	53	True	NA	NA	NA	75081345	75068468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ENSMUST00000044954.7	chr1	+	5244	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTTTGTGCATGTG	NA	False	NA	27	True	AATAAA	-14	NA	191638878	191645359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_191639726_191640962
ENSMUST00000044954.7-1	chr1	+	2177	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	-78	3145	-78	929	multi-exon	FALSE	canonical	3	88	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTCTCTGCTTTTCTTC	NA	False	NA	1	True	AATAAA	-11	NA	191638800	191642214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_191639726_191640962
ENSMUST00000044970.7	chr15	+	4665	2	FSM	ENSMUSG00000042428.7	ENSMUST00000044970.7	4665	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGTGTGTGCTGTGTGTG	NA	False	NA	18	True	AATAAA	-19	NA	80057921	80099720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80058040_80095173
ENSMUST00000044972.11	chr5	-	1447	9	FSM	ENSMUSG00000040013.12	ENSMUST00000044972.11	1447	9	0	0	0	0	multi-exon	FALSE	canonical	3	793	junction_1	94.8445273856114	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378898	135320557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ENSMUST00000044977.10	chr10	+	3145	9	FSM	ENSMUSG00000071253.9	ENSMUST00000044977.10	3145	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	11.9314447993527	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGGCTTGGTTTTTT	NA	False	NA	18	True	ATTAAA	-19	NA	62756411	62782277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
ENSMUST00000045004.11	chr16	+	7319	37	FSM	ENSMUSG00000022946.11	ENSMUST00000045004.11	7319	37	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_4	15.0894452523839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	NA	False	NA	20	True	AATAAA	-23	NA	93508791	93607476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ENSMUST00000045011.9	chr9	-	2572	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	14.834971819619	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCCTGAGTCCGA	NA	False	NA	1	True	ATTAAA	-26	NA	108903192	108888814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ENSMUST00000045026.4	chr11	+	3887	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	25.9765053072448	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCCACTGAATCTT	2752	False	NA	8	True	AATAAA	-18	NA	78192354	78213283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ENSMUST00000045028.15	chr1	-	613	3	FSM	ENSMUSG00000067299.12	ENSMUST00000045028.15	613	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAATATTTTCTGTGT	7620	False	NA	-34	True	NA	NA	NA	65102611	65101030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_65101342_65102217_65102461_65102552
ENSMUST00000045035.12	chr7	-	432	4	FSM	ENSMUSG00000040564.15	ENSMUST00000045035.12	432	4	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_3	145.90027035235	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGAAGTGCTTTGG	NA	False	NA	-4	True	AATAAA	-19	NA	19426585	19423405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19423562_19425812_19425961_19426335_19426412_19426533
ENSMUST00000045041.12	chr4	+	2288	10	FSM	ENSMUSG00000039774.13	ENSMUST00000045041.12	2288	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.3748384988657	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAATGTTCATTACTGAC	NA	False	NA	33	True	AATAAA	-43	NA	47091908	47123070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_47092329_47104099_47104270_47108390_47108581_47111455_47111642_47112321_47112440_47113727_47113905_47117903_47118036_47119514_47119629_47120361_47120509_47122436
ENSMUST00000045078.13	chr4	+	1280	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	33.5326333591622	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTTGTGTTTGCTGAC	-31	True	NA	13	True	NA	NA	NA	44981394	44990734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ENSMUST00000045108.2	chr1	+	3212	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAGAAATGGTCTATAT	NA	False	NA	NA	False	NA	NA	NA	186699612	186702824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_186699600_186702800
ENSMUST00000045110.14	chr1	+	6282	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_10	4.74561200830128	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCCTGTTTGGCTT	2925	False	NA	12	True	AATAAA	-17	NA	132345292	132394696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ENSMUST00000045114.13	chr10	-	1853	10	FSM	ENSMUSG00000038510.13	ENSMUST00000045114.13	1853	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	383.349983535337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGGCTTTTTACCCA	6591	False	NA	85	True	NA	NA	NA	40122998	40099241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122538
ENSMUST00000045138.6	chr1	-	2538	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	10.1827059272082	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGTCTGTCATTTAA	NA	False	NA	-1	True	AATAAA	-18	NA	163231238	163212476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
ENSMUST00000045142.15	chr4	-	3664	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_15	25.8110417562564	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	-17	True	NA	-6	True	AATAAA	-21	NA	56865188	56810934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ENSMUST00000045153.11	chr11	+	2573	6	FSM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.60434577328853	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTGTGGTGATGAGG	NA	False	NA	NA	False	TATAAA	-25	NA	3280400	3292971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3281005_3281914_3282032_3282108_3282229_3283208_3283413_3283504_3283584_3291522
ENSMUST00000045173.10	chr13	+	2714	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.48917367620871	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTGCTAGCTGCGTG	9425	False	NA	NA	False	AATAAA	-16	NA	56757398	56787171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
ENSMUST00000045174.7-1	chr17	+	2109	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	253	758	253	0	multi-exon	FALSE	canonical	3	244	junction_1	49	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTACAGAACTGCTACT	998	False	NA	8	True	AATAAA	-17	NA	73143700	73157432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_73143787_73153273_73153439_73155574
ENSMUST00000045180.14	chr4	-	2006	8	FSM	ENSMUSG00000041459.16	ENSMUST00000045180.14	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	361.175800938647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGATCGTGAGTTATTG	NA	False	NA	NA	False	NA	NA	NA	148711222	148700375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUST00000045180.14-0	chr4	-	1199	8	FSM	ENSMUSG00000041459.16	ENSMUST00000045180.14	2006	8	0	807	0	0	multi-exon	FALSE	canonical	3	205	junction_2	361.175800938647	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148701302_148702022_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUST00000045196.4	chr2	-	2712	4	FSM	ENSMUSG00000040164.4	ENSMUST00000045196.4	2712	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGGTCATGCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	164013033	164005538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164006936_164009731_164010778_164010997_164011180_164012946
ENSMUST00000045218.9	chr8	+	6624	38	FSM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	37.5002702692963	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692809	41785381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ENSMUST00000045224.14	chr4	+	4216	6	FSM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.00665927567458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAAATTATTTCTTTC	NA	False	NA	26	True	AATAAA	-17	NA	86792632	86839112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_86792834_86804394_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
ENSMUST00000045228.12	chr13	-	6675	6	FSM	ENSMUSG00000063894.16	ENSMUST00000045228.12	8805	6	47	2083	0	-623	multi-exon	FALSE	canonical	3	13	junction_1	3.97994974842648	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGTAGTTGCAAATA	6598	False	NA	NA	False	NA	NA	NA	21715243	21699474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21705133_21705955_21706080_21706393_21706486_21709307_21709477_21710688_21711192_21715114
ENSMUST00000045229.7	chr8	+	2809	13	FSM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	-2	1528	0	0	multi-exon	TRUE	canonical	3	15	junction_7	13.4873912311545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTAGTTTTAATTTGA	NA	False	NA	5	True	AATAAA	-17	NA	13338208	13371396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ENSMUST00000045235.8	chr6	-	4143	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	9.61769203083567	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	-13	True	NA	1	True	ATTAAA	-20	NA	13677965	13625671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ENSMUST00000045243.15	chr3	-	6185	17	FSM	ENSMUSG00000038170.16	ENSMUST00000045243.15	6185	17	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_16	8.347903928532	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATCAAGTTCTTATAG	NA	False	NA	-9	True	AATAAA	-15	NA	97675325	97646169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ENSMUST00000045247.9	chr10	+	3911	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	0	0	0	0	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATGCTGCTGCTACTT	2286	False	NA	NA	False	NA	NA	NA	79795985	79806037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUST00000045247.9-0	chr10	+	1402	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	3	2506	0	86	multi-exon	FALSE	canonical	3	1673	junction_5	33.7828943493195	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTTGGTTGTTCTGTCCC	2289	False	NA	36	True	ACTAAA	-24	NA	79795988	79803531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUST00000045270.15	chr2	+	6069	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_9	50.3348785634772	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	5317	False	NA	37	True	AATAAA	-27	NA	154278414	154381276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ENSMUST00000045277.7	chr7	+	2334	11	FSM	ENSMUSG00000035203.17	ENSMUST00000045277.7	2334	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	46.9447547655753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGGCTCCCTTAAAT	1366	False	NA	19	True	AATAAA	-13	NA	5083291	5101175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5083477_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ENSMUST00000045281.13	chr11	+	5848	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	11.7104996677826	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	74816648	75055274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ENSMUST00000045289.6	chr15	+	1313	8	FSM	ENSMUSG00000041653.6	ENSMUST00000045289.6	1313	8	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	7.55658923167897	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGCCATTAAAGAAACCGG	NA	False	NA	NA	False	NA	NA	NA	84052037	84070407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_84052262_84055282_84055516_84056916_84056983_84058468_84058679_84061016_84061078_84063380_84063537_84065120_84065254_84070177
ENSMUST00000045295.14	chr2	+	4574	35	FSM	ENSMUSG00000036833.17	ENSMUST00000045295.14	4574	35	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.94602248652754	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	10	True	AATAAA	-13	NA	24866044	24944069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ENSMUST00000045296.6	chr8	-	1968	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCAGTTTGCAAAAAA	-5	True	NA	NA	False	ATTAAA	-21	NA	87472562	87450634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_87452485_87472444
ENSMUST00000045312.6	chrX	+	4691	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_3	101.202320735358	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAGCTTCAATTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	150799423	150845690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUST00000045325.14	chr7	-	1071	9	FSM	ENSMUSG00000109324.3	ENSMUST00000045325.14	1071	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1175.65864518575	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTTCATAACTTATG	NA	False	NA	-96	True	GGGGCT	-41	NA	44635780	44626247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631315_44635706
ENSMUST00000045329.10	chr5	-	2346	5	FSM	ENSMUSG00000037339.18	ENSMUST00000045329.10	2346	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	24.5089269450949	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCTGCCTAGATTCT	NA	False	NA	-12	True	ATTAAA	-14	NA	33786966	33757699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196
ENSMUST00000045356.9	chr15	+	370	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	0	465	0	0	multi-exon	FALSE	canonical	3	15185	junction_3	3886.71174930972	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTGGTGATCTAAG	2248	False	NA	34	True	AATAAA	-15	NA	5146126	5148157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
ENSMUST00000045366.10	chr8	-	2748	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9.7082439194738	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13337841	13305963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUST00000045368.12	chr4	+	4275	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	10.8369737473153	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	0	True	NA	13	True	AATAAA	-22	NA	56802348	56809601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ENSMUST00000045372.6	chr6	+	1583	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	149	488	0	-488	multi-exon	FALSE	canonical	3	82	junction_2	7.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACGCGCAAGGTGCCTCG	NA	False	NA	13	True	AATAAA	-18	NA	34453290	34482060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_34453358_34464224_34464886_34481205
ENSMUST00000045376.11	chr14	+	1782	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_9	34.7499640287584	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTCTGTCTTGCTTG	NA	False	NA	16	True	AATAAA	-19	NA	21102641	21498637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUST00000045388.8	chr1	-	1578	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAGTGTATAATAATA	NA	False	NA	NA	False	AATAAA	-26	NA	185849507	185819927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
ENSMUST00000045388.8-0	chr1	-	1407	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	22	149	0	-149	multi-exon	FALSE	canonical	3	108	junction_3	16.3477827242718	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGACTTTCAGATTTA	NA	False	NA	-11	True	AATAAA	-15	NA	185849485	185820076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
ENSMUST00000045393.15	chr8	+	5643	24	FSM	ENSMUSG00000013033.17	ENSMUST00000045393.15	5643	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	19.7858095833748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCACTTGAAGCCACC	3682	False	NA	NA	False	NA	NA	NA	84627343	84666640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84652890_84652906_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ENSMUST00000045396.9	chr19	-	3676	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_20	17.3221707646588	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	6647	False	NA	-3	True	ATTAAA	-17	NA	45986927	45805802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ENSMUST00000045402.14	chr11	-	4554	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCATGTATGTGTATTA	4996	False	NA	NA	False	ATTAAA	-5	NA	120042172	119994785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUST00000045402.14-0	chr11	-	4062	16	FSM	ENSMUSG00000061306.17	ENSMUST00000045402.14	4554	16	0	492	0	0	multi-exon	FALSE	canonical	3	392	junction_1	66.2227218474814	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUST00000045441.8	chr2	+	3909	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	16.3671517531211	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTATCTGCATTTCCA	NA	False	NA	23	True	ATTAAA	-23	NA	150628654	150673678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ENSMUST00000045450.7	chr1	+	4214	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	126	1007	0	-65	multi-exon	FALSE	canonical	2	189	junction_14	33.0659544051011	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTACCTTTTTTTTCTCT	8319	False	NA	33	True	AATAAA	-22	NA	191307873	191354793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUST00000045454.9	chr10	-	2394	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	11.7881296226331	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTCCCCTGGCTTTC	NA	False	NA	-7	True	AATAAA	-26	NA	77351619	77322494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
ENSMUST00000045466.14	chr5	-	5569	7	FSM	ENSMUSG00000049606.17	ENSMUST00000045466.14	5569	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	43.3346153656507	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106843841	106764606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106843663
ENSMUST00000045467.14	chr17	-	965	9	FSM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	37.2237743250198	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247030	34245006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ENSMUST00000045469.15	chr10	+	4323	19	FSM	ENSMUSG00000034902.18	ENSMUST00000045469.15	4323	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	62.7837755246991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCTCCGGTGACTTA	5017	False	NA	NA	False	AATAAA	-16	NA	81128838	81155807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81151712_81151791_81153159_81153238_81153599
ENSMUST00000045473.16	chr1	-	3410	5	FSM	ENSMUSG00000042066.17	ENSMUST00000045473.16	3410	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	2.38484800354236	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGAGGTCTGCTGA	NA	False	NA	0	True	AATAAA	-23	NA	132319019	132284052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318714
ENSMUST00000045487.4	chr8	+	3371	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	0.5	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTTGCTTATTCTACT	NA	False	NA	8	True	AATAAA	-20	NA	124380667	124390623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124380956_124382230_124382290_124387599
ENSMUST00000045517.10	chr17	-	2798	6	FSM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	18.0731845561318	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTGTTTGACTACAG	NA	False	NA	NA	False	AATATA	-26	NA	23982749	23974387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949
ENSMUST00000045521.9	chr19	-	5226	9	FSM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	4.63680924774785	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACAAATTGTCGTTACT	8232	False	NA	NA	False	AATAAA	-13	NA	12478818	12443701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_12447074_12450593_12450684_12455489_12455652_12459437_12459591_12460409_12460472_12462627_12462790_12463792_12463855_12469199_12469915_12478370
ENSMUST00000045537.4	chr2	+	1440	1	FSM	ENSMUSG00000040495.5	ENSMUST00000045537.4	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGCAGGTGCCTTAGGAG	NA	False	NA	NA	False	NA	NA	NA	91757593	91759033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91757600_91759000
ENSMUST00000045540.4	chr11	+	5806	10	FSM	ENSMUSG00000038485.7	ENSMUST00000238729.2	7131	10	-141	1466	-141	-1466	multi-exon	FALSE	canonical	3	14	junction_4	9.34258800425685	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAGAA	NA	False	NA	NA	False	AGTAAA	-39	NA	97253119	97287902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ENSMUST00000045542.13	chr4	+	3033	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	8.01810451416044	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAAATATGATTTTGC	NA	False	NA	3	True	ATTAAA	-16	NA	116578144	116661439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ENSMUST00000045550.5	chr4	-	4245	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	6.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTTTATTTTCCAGGA	4044	False	NA	NA	False	AATAAA	-20	NA	132459857	132452207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132455882_132458186_132458384_132459483
ENSMUST00000045550.5-0	chr4	-	1824	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	18	2403	0	1206	multi-exon	FALSE	canonical	3	48	junction_1	6.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATGTACCACTAAGTG	4062	False	NA	-9	True	ATTAAA	-21	NA	132459839	132454610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132455882_132458186_132458384_132459483
ENSMUST00000045557.10	chr8	-	3517	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	0	0	0	0	multi-exon	FALSE	canonical	3	2143	junction_1	128.439734631066	5576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634433	122607888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ENSMUST00000045560.15	chr1	-	2974	7	FSM	ENSMUSG00000038496.17	ENSMUST00000045560.15	2974	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.48409082672781	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTGGTTATTTCATT	NA	False	NA	NA	False	AATAAA	-13	NA	83016169	82990243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_82991711_82992423_82992566_82997052_82997246_83000054_83000863_83003946_83004102_83005733_83005864_83016090
ENSMUST00000045562.6	chr19	-	2930	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	0	1868	0	-1868	multi-exon	FALSE	canonical	3	354	junction_3	36.2782217728488	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAGTCAGCTAACCC	NA	False	NA	-16	True	AATAAA	-16	NA	43741439	43723560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ENSMUST00000045586.13	chr5	-	5708	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	22.5197444232586	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATGTTTTTCAAAGT	NA	False	NA	-4	True	AATAAA	-21	NA	46014957	45854522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ENSMUST00000045593.12	chr5	+	2877	15	FSM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	29	1745	0	-1745	multi-exon	FALSE	canonical	3	16	junction_4	5.5272977491866	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCAAGGAAGGTGTGGG	NA	False	NA	NA	False	AATAAA	-30	NA	143450367	143489952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143450532_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ENSMUST00000045602.9	chr17	-	732	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	0	0	0	0	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	24943452	24941033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
ENSMUST00000045602.9-0	chr17	-	648	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	84	0	0	0	multi-exon	FALSE	canonical	3	2001	junction_1	127.206743357243	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	24943368	24941033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
ENSMUST00000045604.4	chr2	-	776	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTTTGAATCAAGT	NA	False	NA	-3	True	ATTAAA	-21	NA	24865110	24864128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24864694_24864899
ENSMUST00000045607.12	chr4	+	2955	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	0	0	0	0	multi-exon	FALSE	canonical	2	288	junction_12	49.6985375708199	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATAGCACTGTTTCT	NA	False	NA	NA	False	ATTAAA	-11	NA	44300875	44364675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUST00000045617.15	chr5	-	3117	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	2.99862227317648	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGGTCATTCTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	100867582	100827349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
ENSMUST00000045617.15-0	chr5	-	1745	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	11	1361	0	-1361	multi-exon	FALSE	canonical	2	11	junction_7	2.99862227317648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAAGCCGAGGGGGGTG	NA	False	NA	NA	False	AATAAA	-20	NA	100867571	100828710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
ENSMUST00000045621.9	chr10	+	8369	30	FSM	ENSMUSG00000040054.18	ENSMUST00000045621.9	8369	30	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	122.238495175353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127928651	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127928720_127932307_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ENSMUST00000045628.15	chr10	-	1898	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_7	14.1608831731957	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCCCCGTGTTTGTC	9682	False	NA	-8	True	AATAAA	-15	NA	79752840	79745885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ENSMUST00000045633.6	chr11	+	4358	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	0	0	0	0	multi-exon	FALSE	canonical	3	2354	junction_12	204.057066527969	5405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACACTTGGACCTGGTTC	NA	False	NA	19	True	AATAAA	-32	NA	72332180	72342594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ENSMUST00000045644.9	chr2	+	2402	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.8634563309227	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGTGTGCCACTGT	NA	False	NA	NA	False	TTTAAA	-26	NA	158466807	158481131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
ENSMUST00000045652.8	chr12	-	4035	11	FSM	ENSMUSG00000041702.8	ENSMUST00000045652.8	4035	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	8.02745289615579	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCCTCTCTTTTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	102844537	102750896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
ENSMUST00000045652.8-0	chr12	-	8006	11	FSM	ENSMUSG00000041702.8	ENSMUST00000045652.8	4035	11	-130	-3841	0	0	multi-exon	FALSE	canonical	3	58	junction_1	8.02745289615579	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGAGTTGGACATAGTC	NA	False	NA	-12	True	AATAAA	-15	NA	102844667	102747055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102844474
ENSMUST00000045674.4	chr19	+	2859	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATTTCTGCTTTGAT	NA	False	NA	NA	False	AATAAA	-35	NA	28941352	28944211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_28941400_28944200
ENSMUST00000045692.9	chr17	+	3489	6	FSM	ENSMUSG00000025738.9	ENSMUST00000045692.9	3489	6	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_5	4.22374241638857	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACAAGTGGGTTATT	NA	False	NA	-3	True	ATTAAA	-9	NA	26028058	26040229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
ENSMUST00000045693.8	chr6	+	2486	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_7	60.725246442938	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACAATGCCTTGTGGGG	NA	False	NA	28	True	AATAAA	-22	NA	85408970	85423417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUST00000045694.14	chr1	+	1513	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTGTTCAATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	163822457	163824812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_163822641_163823482
ENSMUST00000045697.12	chr11	+	940	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACAGCTTCAGACCTCT	NA	False	NA	1	True	NA	NA	NA	59093317	59096960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ENSMUST00000045697.12-0	chr11	+	681	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	13	246	0	0	multi-exon	FALSE	canonical	3	484	junction_1	41.3467720088952	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093330	59096714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ENSMUST00000045699.8	chr2	+	4690	17	FSM	ENSMUSG00000040506.17	ENSMUST00000045699.8	4690	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	31.3866387775117	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91596789	91749194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUST00000045705.14	chr2	+	5203	18	FSM	ENSMUSG00000040506.17	ENSMUST00000045705.14	5203	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	14.4832560525026	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560569	91749194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUST00000045720.14	chr7	+	3058	4	FSM	ENSMUSG00000074165.11	ENSMUST00000045720.14	3058	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14.6363322667334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGAATATGTTTTCATT	NA	False	NA	53	True	NA	NA	NA	41282987	41300355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_41283119_41296914_41297042_41297242_41297304_41297616
ENSMUST00000045730.7	chr10	+	6195	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_2	280.358104335628	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4216379	4309470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
ENSMUST00000045737.14	chr5	+	2552	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	26.0711042984152	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACTCTTCTATCTCT	NA	False	NA	13	True	AATAAA	-27	NA	25427879	25470916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ENSMUST00000045743.13	chr3	+	5006	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	11.768168758068	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	97565527	97581128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ENSMUST00000045744.7	chr10	-	3024	21	FSM	ENSMUSG00000034917.9	ENSMUST00000045744.7	3024	21	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_20	26.4920271025077	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACAAGACTGAGG	7297	False	NA	8	True	AATAAA	-27	NA	81127101	81109040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81126881
ENSMUST00000045748.7	chrX	-	2115	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACCTTGGTTTGAAAGA	NA	False	NA	-2	True	ATTAAA	-33	NA	92875807	92808212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ENSMUST00000045748.7-0	chrX	-	1704	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	0	411	0	78	multi-exon	FALSE	canonical	3	493	junction_5	23.1352473386711	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTCTTGCTGTGGCA	NA	False	NA	-7	True	ACTAAA	-16	NA	92875807	92808623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ENSMUST00000045756.14	chr3	+	685	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	0	0	0	0	multi-exon	TRUE	canonical	3	427	junction_2	41.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGACGTAGAGTGTTTC	NA	False	NA	20	True	AATAAA	-24	NA	93462386	93471950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_93462519_93468250_93468403_93471549
ENSMUST00000045761.7	chr2	-	4201	5	FSM	ENSMUSG00000037703.15	ENSMUST00000045761.7	4201	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1.87082869338697	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGATGGAAAGAGTTT	4017	False	NA	NA	False	NA	NA	NA	130484723	130474761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130477385_130477692_130478548_130478862_130479340_130479804_130479968_130484640
ENSMUST00000045766.8	chr15	-	2126	18	FSM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_1	88.3053055575902	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCCTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	8128675	7902542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ENSMUST00000045779.6	chr11	+	3486	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_11	15.0937896237857	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGCAGCTGAGTCACTT	NA	False	NA	11	True	AATAAA	-14	NA	114566256	114611803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUST00000045788.9	chr13	-	1933	9	FSM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	524.81126071665	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGGCCGTGTTTTGTGT	6006	False	NA	-8	True	AGTAAA	-15	NA	56283343	56221434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56236064_56236156_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ENSMUST00000045791.11	chr9	+	2340	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	0	0	0	0	multi-exon	TRUE	canonical	3	243	junction_4	15.3927742788621	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGCCCTGATGTCAAT	NA	False	NA	13	True	AATAAA	-15	NA	57468225	57496078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUST00000045793.15	chr4	-	5012	12	FSM	ENSMUSG00000035696.16	ENSMUST00000045793.15	5012	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	25.3178145884907	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	928	False	NA	-5	True	AATAAA	-21	NA	44168339	44126214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44168242
ENSMUST00000045802.7	chr9	+	2188	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAAAATCTCTTGTCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	65797518	65810548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ENSMUST00000045802.7-0	chr9	+	914	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	125	1149	0	-1149	multi-exon	FALSE	canonical	3	794	junction_3	40.4722126896961	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGTAAAATCTCTTGTC	NA	False	NA	NA	False	ATTAAA	-14	NA	65797643	65809399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ENSMUST00000045807.14	chr11	+	3389	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_8	75.3882467968452	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTGGATTCTAGTA	NA	False	NA	26	True	AATAAA	-18	NA	74788903	74800168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ENSMUST00000045810.15	chr7	+	3241	6	FSM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	0	1374	0	0	multi-exon	FALSE	canonical	2	6	junction_1	10.7962956610126	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTCTGCAGATGGG	NA	False	NA	NA	False	NA	NA	NA	12711774	12718267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ENSMUST00000045817.14	chr7	-	3352	15	FSM	ENSMUSG00000036915.18	ENSMUST00000045817.14	3352	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	10.266102334521	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAAATGTGCTTGTGAAAG	NA	False	NA	NA	False	AATAAA	-16	NA	30156940	30146960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30147880_30149261_30149328_30149802_30149904_30150226_30150326_30152105_30152326_30152478_30152580_30152836_30152970_30153060_30153189_30153438_30153588_30153662_30153769_30153933_30154085_30154596_30154758_30154889_30155040_30155844_30155995_30156222
ENSMUST00000045827.5	chr13	-	3692	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTGAGGCTTTGTG	NA	False	NA	NA	False	ATTAAA	-25	NA	68730240	68708898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ENSMUST00000045827.5-0	chr13	-	3219	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	-28	501	0	82	multi-exon	FALSE	canonical	3	277	junction_10	41.7021141733919	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730268	68709399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ENSMUST00000045847.15	chr7	-	2707	4	FSM	ENSMUSG00000040857.16	ENSMUST00000045847.15	3505	4	31	767	0	-767	multi-exon	FALSE	canonical	3	7	junction_2	2.82842712474619	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTGGTAATTTATCCTA	4512	False	NA	-15	True	AATAAA	-14	NA	24950155	24942752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24950003
ENSMUST00000045855.9	chr6	-	1058	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	18.8738502225228	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGACAGTTTTAAATTATT	NA	False	NA	-29	True	AATACA	-20	NA	135145213	135114519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
ENSMUST00000045866.9	chr10	-	4722	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_14	69.0087246776279	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTCTTGGTGGCTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	62438060	62416029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ENSMUST00000045876.8	chr1	-	2927	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	0	252	0	-252	multi-exon	TRUE	canonical	2	170	junction_8	40.7878461455702	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTTATTTGACATAAA	NA	False	NA	NA	False	CATAAA	-23	NA	163822365	163781574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ENSMUST00000045884.17	chr8	-	2078	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	29.2453287927892	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCAAGATGACAATGTGC	436	False	NA	-5	True	AATAAA	-37	NA	122556308	122523051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ENSMUST00000045887.9	chr10	-	1084	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_1	82	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGCTCTGTAACGG	1253	False	NA	7	True	AATAAA	-27	NA	71180784	71166309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_71166957_71172043_71172250_71180553
ENSMUST00000045887.9-0	chr10	-	744	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	98	242	98	-242	multi-exon	FALSE	canonical	3	1606	junction_1	82	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATGTACATTGTACTT	1351	False	NA	-28	True	ATTAAA	-15	NA	71180686	71166551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_71166957_71172043_71172250_71180553
ENSMUST00000045897.15	chr1	+	1216	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	0	0	0	0	multi-exon	FALSE	canonical	3	19621	junction_2	1755.19477195552	12624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ENSMUST00000045898.4	chrX	+	4888	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	4.01527694930148	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGCCTTGTTTATT	NA	False	NA	4	True	AATAAA	-17	NA	92718707	92793557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
ENSMUST00000045905.15	chr14	-	3293	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_11	31.8875575504085	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTTTGTACTTCTG	NA	False	NA	-5	True	AATAAA	-20	NA	45767575	45696251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ENSMUST00000045907.16	chr12	+	4507	28	FSM	ENSMUSG00000034601.18	ENSMUST00000045907.16	4507	28	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_27	19.0025628189986	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTGTTTCTTAGAAG	NA	False	NA	22	True	AATAAA	-20	NA	71184613	71290077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71289717
ENSMUST00000045909.8	chr13	+	1894	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTGTTCTGCTTGCATG	NA	False	NA	38	True	NA	NA	NA	95461744	95474349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_95461853_95472563
ENSMUST00000045918.15	chr16	-	1451	9	FSM	ENSMUSG00000033809.16	ENSMUST00000045918.15	1451	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.475578621378	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGGTTGCTCGTGCCT	NA	False	NA	13	True	AATAAA	-36	NA	20429518	20424200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
ENSMUST00000045921.14	chr12	-	2490	14	FSM	ENSMUSG00000037336.15	ENSMUST00000045921.14	2490	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.01473859287828	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAGACAGCTCTGCT	NA	False	NA	NA	False	ATTAAA	-17	NA	4924358	4913071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4914080_4915136_4915314_4915727_4915872_4916158_4916269_4916448_4916530_4916789_4916874_4917337_4917460_4917611_4917703_4918912_4919044_4919131_4919211_4919534_4919659_4920498_4920624_4921375_4921502_4924270
ENSMUST00000045923.10	chr11	-	2950	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCATGTCCACAGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	106050968	106047081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
ENSMUST00000045923.10-0	chr11	-	1165	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	0	1785	0	273	multi-exon	FALSE	canonical	3	236	junction_1	24.7638849940796	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106050968	106048866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
ENSMUST00000045931.12	chr12	+	2597	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	18.7929123266993	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1583	False	NA	11	True	AATAAA	-16	NA	84363625	84390497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUST00000045959.8	chr2	+	1637	15	FSM	ENSMUSG00000038572.8	ENSMUST00000045959.8	1637	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	7.50951777032701	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGAGTTTGCTG	NA	False	NA	5	True	AATAAA	-15	NA	154065661	154082822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154065814_154066857_154067075_154069010_154069116_154069982_154070115_154070773_154070859_154070950_154071015_154071386_154071473_154072092_154072276_154074753_154074808_154075108_154075259_154076410_154076479_154076607_154076654_154078677_154078742_154080747_154080828_154082671
ENSMUST00000045970.8	chr1	+	4176	9	FSM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	9.32654142756038	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTGTGTGTGCTTTAA	7183	False	NA	NA	False	NA	NA	NA	92759366	92788501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUST00000045971.9	chr11	-	2155	11	FSM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_10	6.56429737291052	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTGTCTATTTTTAA	3	True	NA	-2	True	ATTAAA	-24	NA	69686769	69674861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709_69684819_69684975_69685086_69685794_69685840_69686420_69686561_69686647
ENSMUST00000045976.7	chr14	+	913	2	FSM	ENSMUSG00000071229.4	ENSMUST00000045976.7	913	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTCTTTGTAACTGA	NA	False	NA	NA	False	AAGAAA	-3	NA	122272085	122275832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_122272425_122275258
ENSMUST00000045986.8	chr6	-	1230	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	5	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGTGTGCGTTGTCCTTC	7982	False	NA	NA	False	AATACA	-21	NA	85114748	85110659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85111271_85113804_85114096_85114420
ENSMUST00000045993.15	chr5	+	1755	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	0	0	0	0	multi-exon	FALSE	canonical	3	1193	junction_9	105.134834062424	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTCTATTCCTTTT	5273	False	NA	43	True	AATAAA	-45	NA	100666174	100695669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUST00000045994.8	chr8	-	3424	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTAGTGTAATTTCTT	NA	False	NA	0	True	ATTAAA	-29	NA	127697821	127673921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ENSMUST00000045994.8-0	chr8	-	1569	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	1	1854	0	0	multi-exon	FALSE	canonical	3	153	junction_8	10.5470374987482	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGTGTTCAAATGGTCA	NA	False	NA	-11	True	AATAAA	-21	NA	127697820	127675775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ENSMUST00000046011.12	chr12	+	3021	21	FSM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_7	25.2103153490788	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTGTTTAGCTTA	NA	False	NA	14	True	AATAAA	-17	NA	17398458	17480096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ENSMUST00000046022.16	chr17	-	3951	28	FSM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_20	16.8071446039882	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAGTATGGTAACT	5305	False	NA	-23	True	AATAAA	-13	NA	35069186	35058219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ENSMUST00000046028.12	chr6	+	5370	21	FSM	ENSMUSG00000039629.15	ENSMUST00000046028.12	5370	21	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_19	5.0386009963084	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTTTAGTTCTTTAA	-5	True	NA	NA	False	AATAAA	-24	NA	29917011	29959680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955430_29955636_29956656
ENSMUST00000046030.8	chr2	-	3396	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	0	0	0	0	multi-exon	TRUE	canonical	3	379	junction_8	12.585330053057	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	6977	False	NA	-12	True	AATAAA	-16	NA	140012484	139961802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ENSMUST00000046038.9	chr19	-	1535	4	FSM	ENSMUSG00000040414.9	ENSMUST00000046038.9	1535	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	77.3146529162199	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43663320	43652239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43653083_43654210_43654268_43655353_43655583_43662914
ENSMUST00000046073.16	chr5	-	5180	23	FSM	ENSMUSG00000029475.18	ENSMUST00000046073.16	5180	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_20	155.859758959168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGTTTGAGGGTTTC	9384	False	NA	NA	False	TATAAA	-24	NA	123127162	123008727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122604_123125724_123125870_123126930
ENSMUST00000046094.6	chr19	+	1473	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	0	0	0	0	multi-exon	TRUE	canonical	3	3675	junction_3	183.825475806689	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3277	False	NA	31	True	AATAAA	-20	NA	4242063	4245419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ENSMUST00000046114.5	chr10	-	604	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_1	11.5	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTCATGCCCTGTG	3094	False	NA	0	True	AATAAA	-29	NA	81102768	81100546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81100832_81101484_81101642_81102606
ENSMUST00000046122.11	chr5	+	2267	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTTCTGTGAAGGGTC	NA	False	NA	35	True	AATAAA	-34	NA	45650715	45670033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUST00000046122.11-1	chr5	+	1676	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	59	532	59	-532	multi-exon	FALSE	canonical	3	2266	junction_5	182.488412874169	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTGTTCTTTTTTTT	NA	False	NA	17	True	ACTAAA	-2	NA	45650774	45669501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUST00000046149.9	chr2	+	1057	3	FSM	ENSMUSG00000037740.9	ENSMUST00000046149.9	1057	3	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	21	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	14	True	NA	NA	NA	130405661	130407314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130405911_130406000_130406352_130406857
ENSMUST00000046157.10	chr3	-	6875	26	FSM	ENSMUSG00000039286.13	ENSMUST00000046157.10	6875	26	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_25	20.0419559923676	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27764588	27470310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27764494
ENSMUST00000046177.9	chr7	+	2039	11	FSM	ENSMUSG00000036931.16	ENSMUST00000046177.9	2039	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	4.70744091837593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGGTGTCATTAAA	741	False	NA	16	True	ATTAAA	-16	NA	30122699	30128171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850_30127016_30127558
ENSMUST00000046191.9	chr14	-	2788	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	0	0	0	0	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATCCATCAGGTAAC	NA	False	NA	NA	False	ATTAAA	-11	NA	45626418	45613790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUST00000046191.9-0	chr14	-	1503	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	168	1117	0	703	multi-exon	FALSE	canonical	3	1091	junction_1	71.0419594324368	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	-1	True	ATTAAA	-30	NA	45626250	45614907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUST00000046206.5	chr18	-	4299	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	46.8807589054993	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	24663261	24618016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUST00000046207.9	chr12	+	756	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	31	393	0	0	multi-exon	FALSE	canonical	3	1039	junction_3	63.8609600790829	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTGTTAAACTTCTCAC	NA	False	NA	35	True	AATAAA	-25	NA	4867574	4877266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
ENSMUST00000046212.2	chr3	+	4426	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATATTACTTGTATAT	NA	False	NA	NA	False	NA	NA	NA	104545983	104565778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
ENSMUST00000046212.2-0	chr3	+	3222	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	0	1204	0	-1204	multi-exon	FALSE	canonical	3	470	junction_2	50.2462685181696	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTCCGCATGTTTAT	NA	False	NA	23	True	AATAAA	-24	NA	104545983	104564574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
ENSMUST00000046227.12	chr2	-	4554	26	FSM	ENSMUSG00000036893.18	ENSMUST00000046227.12	4554	26	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_16	68.3400438981422	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAACAAAATGATTT	9630	False	NA	NA	False	AATAAA	-25	NA	24809586	24681154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ENSMUST00000046244.15	chr17	+	1519	7	FSM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	48.3439643480847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGCACTCTGGTTTGC	2976	False	NA	77	True	NA	NA	NA	35055994	35058209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ENSMUST00000046245.6	chr7	-	3626	6	FSM	ENSMUSG00000070822.6	ENSMUST00000046245.6	3626	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	12.3838604643302	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGCCTCATTGTTTTG	NA	False	NA	-1	True	AATAAA	-20	NA	12509585	12502018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12503673_12504730_12504821_12505590_12505670_12505935_12506043_12507367_12507518_12508039
ENSMUST00000046246.13	chr13	-	1697	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	33.4015967682185	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTCTGTGCCTCCCCGC	NA	False	NA	-7	True	AATAAA	-15	NA	55661259	55646228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUST00000046255.14	chr6	-	1610	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	18.9267594221045	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACTATTGATTATGGT	NA	False	NA	-18	True	ACTAAA	-19	NA	134874821	134846070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
ENSMUST00000046255.14-0	chr6	-	1628	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	-67	49	0	0	multi-exon	FALSE	canonical	3	36	junction_1	18.9267594221045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	-18	True	ATTAAA	-17	NA	134874888	134846119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
ENSMUST00000046257.14	chr2	+	7820	55	FSM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_7	89.7303917849273	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855694	29921463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ENSMUST00000046266.13	chr12	-	6848	13	FSM	ENSMUSG00000042507.16	ENSMUST00000046266.13	6848	13	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_12	22.3288241716596	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTCATTGTTGAA	NA	False	NA	-11	True	ATTAAA	-10	NA	84265655	84195949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
ENSMUST00000046274.12	chr2	+	5303	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	23	3040	0	-1433	multi-exon	FALSE	canonical	3	25	junction_15	22.7822239150626	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTGTCCCTCTGATCGC	NA	False	NA	NA	False	ATTAAA	-30	NA	158251795	158338133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ENSMUST00000046283.16	chr16	-	4026	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	39	172	0	-172	multi-exon	FALSE	canonical	3	50	junction_2	5.78791845139511	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATATTGTTTTCTATCTT	4020	False	NA	-2	True	AATAAA	-21	NA	75563670	75552081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ENSMUST00000046288.16	chr17	+	1582	4	FSM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	1707.19269237216	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	False	NA	31	True	AATAAA	-21	NA	31739091	31750305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31739236_31740542_31740667_31746283_31747376_31750083
ENSMUST00000046303.12	chr6	+	3629	5	FSM	ENSMUSG00000032652.14	ENSMUST00000046303.12	3629	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	2.06155281280883	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCAGTTGCCTGTTTGAC	NA	False	NA	8	True	AATAAA	-19	NA	134807116	134835894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134807408_134826065_134826264_134828042_134828188_134829240_134829278_134832936
ENSMUST00000046305.12	chr12	+	4998	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	14.334249175764	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGGTTAATTCACTCTT	3381	False	NA	6	True	AATAAA	-17	NA	71062763	71145366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ENSMUST00000046306.15	chr7	-	4430	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_1	6.97614984548545	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTTTTTTTTTA	NA	False	NA	-2	True	AATAAA	-17	NA	131012250	130990380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
ENSMUST00000046316.11	chr3	-	7099	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	14.2253246568117	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGGTCTTCTCTTGCC	NA	False	NA	-20	True	AATAAA	-16	NA	104419156	104361295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ENSMUST00000046331.5	chr12	+	2228	2	FSM	ENSMUSG00000035560.6	ENSMUST00000046331.5	2228	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATGACCTCTTTGTTTC	NA	False	NA	NA	False	AATAAA	-19	NA	65272290	65275228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_65274272_65274981
ENSMUST00000046351.7	chr7	-	2886	3	FSM	ENSMUSG00000036957.9	ENSMUST00000046351.7	2886	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGGGCTGTTCCTTTGCC	NA	False	NA	NA	False	AAGAAA	-16	NA	30062197	30054913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30055529_30058808_30060240_30061357
ENSMUST00000046371.13	chr9	+	2626	10	FSM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	8.89999306422257	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTGGCCTTCTGCCTG	97	False	NA	NA	False	AATAAA	-16	NA	21848328	21860200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ENSMUST00000046386.5	chr8	-	7444	13	FSM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.00545422430901	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCACCATTCTCAGAT	NA	False	NA	NA	False	AATAAA	-20	NA	122379640	122325441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_122329071_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ENSMUST00000046389.5	chr2	+	1898	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	22.7991769398766	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGACTTATTTATATGAA	NA	False	NA	55	True	AATAAA	-21	NA	76200327	76214112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ENSMUST00000046390.14	chr1	-	5052	30	FSM	ENSMUSG00000018417.15	ENSMUST00000046390.14	5052	30	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	59.0883173807801	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955230	51788923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUST00000046390.14-1	chr1	-	4922	30	FSM	ENSMUSG00000018417.15	ENSMUST00000046390.14	5052	30	130	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	59.0883173807801	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCGAAGTCTTCGTGTT	NA	False	NA	16	True	GATAAA	-5	NA	51955100	51788923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUST00000046399.7	chr2	-	2235	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	10.0054672554559	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	999	False	NA	NA	False	AATAAA	-15	NA	150450487	150424999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
ENSMUST00000046404.8	chr12	+	3261	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_2	45.0115540722602	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	False	NA	33	True	ATTAAA	-14	NA	102724225	102743966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ENSMUST00000046418.3	chr5	-	2208	6	FSM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	6.98569967862919	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCATTGTGGGGTTTTCA	NA	False	NA	-5	True	AATAAA	-19	NA	143301115	143286961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300657
ENSMUST00000046425.16	chr4	-	4569	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_10	28.2349074728429	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAGCCAATCGAATTAT	7860	False	NA	-5	True	ATTAAA	-22	NA	129534858	129519870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ENSMUST00000046426.10	chr5	-	4712	28	FSM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_13	5.06365515872966	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCAGCCTTTGATTTC	9183	False	NA	1	True	AATAAA	-22	NA	120726738	120672217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
ENSMUST00000046426.10-0	chr5	-	2755	28	FSM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	61	1896	0	-1896	multi-exon	FALSE	canonical	2	12	junction_13	5.06365515872966	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGGGAACCATGTGTGT	9244	False	NA	NA	False	NA	NA	NA	120726677	120674113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
ENSMUST00000046433.7	chrX	+	1223	1	FSM	ENSMUSG00000036537.7	ENSMUST00000046433.7	1223	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTTTCTTTCTTTCT	NA	False	NA	21	True	AATAAA	-21	NA	36454897	36456120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36454900_36456100
ENSMUST00000046461.9	chr8	-	2590	9	FSM	ENSMUSG00000040631.9	ENSMUST00000046461.9	2590	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.10653744329409	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGTTGATCAATAAATA	NA	False	NA	2	True	AATAAA	-18	NA	95602958	95590487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487_95597697_95602758
ENSMUST00000046463.10	chr15	+	3449	12	FSM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_6	19.3826198026279	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	False	NA	17	True	AATAAA	-18	NA	79575045	79605680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ENSMUST00000046470.16	chr16	+	1337	11	FSM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	0	488	0	0	multi-exon	FALSE	canonical	3	136	junction_3	20.7113495455994	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCTTGCCCTTGAGAT	NA	False	NA	3	True	AATAAA	-12	NA	8288651	8308060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ENSMUST00000046485.5	chr12	-	2068	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_2	7.87400787401181	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATATTTATGGTATGTA	NA	False	NA	-6	True	ATTAAA	-23	NA	99849701	99683790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
ENSMUST00000046497.8	chr17	+	1190	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_2	31.4960314960472	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCACGGTGTC	NA	False	NA	14	True	NA	NA	NA	46807636	46810550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
ENSMUST00000046498.3	chr4	-	1333	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	0	388	0	-388	multi-exon	FALSE	canonical	3	573	junction_1	0	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTTTGGGTCT	404	False	NA	-8	True	AATAAA	-20	NA	127251974	127248989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_127250167_127251818
ENSMUST00000046502.7	chr9	-	9305	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_10	7.57277616039918	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTTGGTCAAGAAAT	7295	False	NA	-2	True	AATAAA	-11	NA	106666393	106565280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ENSMUST00000046502.7-0	chr9	-	6361	22	FSM	ENSMUSG00000040661.7	ENSMUST00000046502.7	9305	22	18	2926	0	-2218	multi-exon	FALSE	canonical	3	17	junction_10	7.57277616039918	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTCCTGCGTCCTA	7313	False	NA	1	True	CATAAA	-20	NA	106666375	106568206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106570910_106573070_106573164_106575316_106575407_106577693_106577894_106579843_106580041_106580690_106580864_106581263_106581470_106582966_106583067_106585413_106585533_106587532_106587652_106587866_106588119_106589530_106589709_106590442_106590786_106593259_106593457_106594384_106594519_106594947_106595131_106596111_106596339_106596806_106596924_106597523_106597664_106599914_106600114_106631143_106631338_106666178
ENSMUST00000046513.10	chr10	-	1841	5	FSM	ENSMUSG00000037747.10	ENSMUST00000046513.10	2877	5	0	1036	0	159	multi-exon	FALSE	canonical	3	11	junction_1	4.33012701892219	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTGTACGTTGTATA	NA	False	NA	NA	False	AATAAA	-16	NA	70435121	70394547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_70395612_70401003_70401122_70404731_70404907_70406652_70406850_70434834
ENSMUST00000046514.13	chr1	+	4906	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	0	0	0	0	multi-exon	FALSE	canonical	3	1945	junction_14	331.30791485156	5631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGGTTCATCCTGCA	NA	False	NA	22	True	AATAAA	-24	NA	185095240	185160557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ENSMUST00000046515.15	chr3	+	4480	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	11.2333209693305	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTCTGGCCCTTCCC	5568	False	NA	10	True	AATAAA	-17	NA	27237113	27299107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ENSMUST00000046518.12	chr12	-	2918	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_5	27.4851250454756	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2407	False	NA	-1	True	AATAAA	-20	NA	102671189	102534840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
ENSMUST00000046520.13	chr6	-	2694	4	FSM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.16024689946929	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTTGTACATGTGCATA	NA	False	NA	0	True	AATAAA	-19	NA	54570162	54554588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_54556672_54562787_54562916_54566257_54566410_54569831
ENSMUST00000046521.14	chr3	-	6102	10	FSM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	9.10162107389884	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCCTTTTTGTGCCT	NA	False	NA	-9	True	AATAAA	-21	NA	97134680	97110977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
ENSMUST00000046525.10	chr17	-	2123	10	FSM	ENSMUSG00000040680.10	ENSMUST00000046525.10	2123	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_8	4.5242829047783	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTAGCAAGTTCTTTGC	NA	False	NA	NA	False	AATAAA	-18	NA	23964807	23960170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23960946_23961170_23961250_23961330_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908_23964078_23964712
ENSMUST00000046532.4	chr4	-	1880	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127224637	127219027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_127220565_127224294
ENSMUST00000046542.13	chr3	+	3062	9	FSM	ENSMUSG00000034544.18	ENSMUST00000046542.13	3062	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	112.554153632818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	False	NA	10	True	AATAAA	-10	NA	66893035	67265723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_66893140_66901849_66902046_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUST00000046548.14	chr2	+	5060	18	FSM	ENSMUSG00000050199.14	ENSMUST00000046548.14	5060	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_13	11.7799900717261	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGAAAACTGTTTTTT	NA	False	NA	40	True	ATTAAA	-22	NA	109747991	109844602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109748651_109801036_109801109_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ENSMUST00000046549.5	chr17	-	1420	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	11.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGCCTGTTCTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	48739958	48726258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48726662_48729968_48730534_48739506
ENSMUST00000046549.5-0	chr17	-	1222	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	198	0	-114	0	multi-exon	FALSE	canonical	3	57	junction_2	11.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGCCTGTTCTCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	48739760	48726258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48726662_48729968_48730534_48739506
ENSMUST00000046558.8	chr4	+	608	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	99.534114754691	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTCTGATTCCATTTT	NA	False	NA	-2	True	ATTAAA	-9	NA	107111121	107137125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUST00000046575.17	chr7	-	1883	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_7	41.0738097969944	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5440	False	NA	-9	True	AATAAA	-14	NA	44519212	44512491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUST00000046587.8	chr9	-	3225	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	41.0680329859288	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375341	57348609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
ENSMUST00000046603.15	chr5	-	4453	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_10	27.4864725426801	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777605	108717279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ENSMUST00000046614.10	chr3	-	1596	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGGGTATTTTTCTT	NA	False	NA	NA	False	CATAAA	-17	NA	151871867	151799475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
ENSMUST00000046614.10-0	chr3	-	1354	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	240	2	-240	0	multi-exon	FALSE	canonical	3	17	junction_3	6.40624695121879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGTGGGTATTTTTC	NA	False	NA	NA	False	CATAAA	-15	NA	151871627	151799477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
ENSMUST00000046627.6	chr9	+	1872	10	FSM	ENSMUSG00000040875.13	ENSMUST00000046627.6	1872	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	12.4880189495352	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCGTTGGTATTTGTTG	NA	False	NA	6	True	ATTAAA	-16	NA	114896346	115061291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ENSMUST00000046633.10	chr15	-	5076	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	35.1681674245332	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTACTTTCTTTT	2180	False	NA	-10	True	AATAAA	-20	NA	4025226	4011516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ENSMUST00000046638.10	chr10	-	2033	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_11	25.2121576340063	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAATGTTCTTGAGTG	NA	False	NA	NA	False	AATAAA	-22	NA	105677239	105599049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
ENSMUST00000046644.7	chr13	+	559	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_3	49.6185449202211	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATTTTCAGTTGGCCA	NA	False	NA	37	True	AATAAA	-37	NA	94925417	94979430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
ENSMUST00000046651.7	chr17	+	1135	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	381.26547181721	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	21	True	AATAAA	-29	NA	48717107	48724294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUST00000046659.14	chr4	+	3884	12	FSM	ENSMUSG00000042388.15	ENSMUST00000046659.14	3884	12	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_1	32.2174943493246	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATCTCTCCAGAAGAG	NA	False	NA	17	True	AATAAA	-20	NA	127062996	127130815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_127063159_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129177_127129322_127129942
ENSMUST00000046663.8	chr16	+	6561	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	11.4960862905599	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCTCAACTCTTAAGG	NA	False	NA	NA	False	AATAAA	-3	NA	58228805	58290090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ENSMUST00000046675.12	chr4	-	2143	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	3	493	0	140	multi-exon	TRUE	canonical	3	109	junction_1	14.396180048888	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCACGCCTTTAATCCC	NA	False	NA	-20	True	NA	NA	NA	129512889	129509411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUST00000046709.9	chr14	-	4673	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_21	82.6076606617086	2692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434873	52397870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ENSMUST00000046719.14	chr17	-	3645	10	FSM	ENSMUSG00000023994.14	ENSMUST00000046719.14	3645	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	14.7832070227182	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGTGACTGGATTTT	NA	False	NA	-15	True	AATAAA	-15	NA	48716793	48693923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706097_48707465_48707609_48716653
ENSMUST00000046735.11	chr9	-	1391	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_5	67.9187750183997	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	7880	False	NA	-6	True	AATAAA	-22	NA	106563114	106535950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
ENSMUST00000046743.11	chr1	+	1618	10	FSM	ENSMUSG00000033488.12	ENSMUST00000046743.11	1618	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	9.08125188520113	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	14	True	NA	NA	NA	157286149	157316630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_157286216_157286313_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157294735_157294818_157298185_157298368_157299757_157299987_157316012
ENSMUST00000046748.13	chr3	+	1977	4	FSM	ENSMUSG00000037661.15	ENSMUST00000046748.13	1977	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	83.6341238171756	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910137	30951339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30910207_30931383_30931711_30944090_30944191_30949858
ENSMUST00000046751.13	chr4	+	4210	15	FSM	ENSMUSG00000042408.14	ENSMUST00000046751.13	4210	15	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_1	19.4952898550038	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCCTTTATGTTGGTGA	2744	False	NA	17	True	NA	NA	NA	126971175	127018163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126971394_126972200_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
ENSMUST00000046754.15	chr17	+	920	5	FSM	ENSMUSG00000023861.18	ENSMUST00000046754.15	920	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	502.397937396244	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATTTGAGTGTGACTAT	2155	False	NA	0	True	AATAAA	-14	NA	8502627	8516489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8502794_8515358_8515363_8515366_8515464_8515655_8515789_8515969
ENSMUST00000046755.14	chr11	-	5615	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_7	88.5788303358848	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414957	12186675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUST00000046765.10	chr8	+	2235	3	FSM	ENSMUSG00000033998.10	ENSMUST00000046765.10	2235	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	9	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGTTTATTACAACT	NA	False	NA	21	True	AATAAA	-18	NA	126721908	126757424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_126722554_126751750_126752147_126756230
ENSMUST00000046769.16	chr2	+	6511	43	FSM	ENSMUSG00000040549.17	ENSMUST00000046769.16	6511	43	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_41	104.161003927713	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCATTTCCCAAAATGC	NA	False	NA	9	True	AATAAA	-14	NA	91376666	91451007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450095_91450185_91450326
ENSMUST00000046770.10	chr1	-	742	4	FSM	ENSMUSG00000037499.10	ENSMUST00000046770.10	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	10.5303793326209	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGTGTATGGTTCTTG	NA	False	NA	0	True	AATAAA	-19	NA	191050391	191038985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191039287_191042115_191042220_191043656_191043718_191050115
ENSMUST00000046777.11	chr16	+	1592	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	0	1009	0	0	multi-exon	FALSE	canonical	3	141	junction_7	10.0915806492343	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTCAGAGAAGTGTTC	NA	False	NA	18	True	AATAAA	-14	NA	49519595	49584480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
ENSMUST00000046807.7	chr10	+	3756	6	FSM	ENSMUSG00000037762.7	ENSMUST00000046807.7	3756	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	10.3846039885977	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTTCGTCAATA	NA	False	NA	22	True	AATAAA	-30	NA	70080929	70121798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_70081209_70091789_70092023_70102921_70103066_70110755_70110852_70118118_70119028_70119703
ENSMUST00000046831.11	chr9	-	785	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	45.9879211194514	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCATGGTCATTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	21838758	21832304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
ENSMUST00000046833.5	chr10	+	2414	5	FSM	ENSMUSG00000035852.12	ENSMUST00000046833.5	2414	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.57071421427143	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658460	79666286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79658521_79661529_79663269_79663711_79663846_79665226_79665266_79665844
ENSMUST00000046835.14	chr11	+	6255	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_9	15.4083965785252	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTAATGTTTGTGTTTC	1976	False	NA	27	True	AATAAA	-17	NA	54329024	54409061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ENSMUST00000046856.14	chr6	+	2418	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	4.03026742978125	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTCCCCTTCTTGCT	NA	False	NA	NA	False	AATAGA	-31	NA	54016557	54277706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
ENSMUST00000046863.12	chr7	+	1828	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_6	10.2794292967395	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1884	False	NA	14	True	AATAAA	-15	NA	127399775	127402974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUST00000046869.11	chr19	-	2068	9	FSM	ENSMUSG00000040913.12	ENSMUST00000046869.11	2068	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	9.07520660921833	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTTTGGTGGTTAG	NA	False	NA	-5	True	AATAAA	-18	NA	45648751	45566692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
ENSMUST00000046875.14	chr1	-	9033	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTGCTTGTTCATTC	NA	False	NA	1	True	AATAAA	-20	NA	36283386	36179107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ENSMUST00000046875.14-0	chr1	-	5574	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	0	3459	0	0	multi-exon	FALSE	canonical	3	131	junction_21	76.4630261956719	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283386	36182566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ENSMUST00000046890.12	chr7	+	1525	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	0	0	0	0	multi-exon	TRUE	canonical	3	288	junction_1	23.1395764870492	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795772	140798571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ENSMUST00000046892.10	chr5	-	2189	4	FSM	ENSMUSG00000033615.10	ENSMUST00000046892.10	2189	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1.4142135623731	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTATTCCTTCCAAGACT	NA	False	NA	0	True	AATAAA	-19	NA	108697890	108666419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108668193_108673257_108673434_108696371_108696476_108697754
ENSMUST00000046893.10	chr6	-	2676	5	FSM	ENSMUSG00000038390.12	ENSMUST00000046893.10	2676	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.56195171219375	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGTTCAGCGTTTGC	NA	False	NA	0	True	ATTAAA	-21	NA	124840880	124835406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124836184_124836454_124836613_124836985_124837176_124837781_124839086_124840633
ENSMUST00000046901.14	chr5	-	1543	7	FSM	ENSMUSG00000025856.16	ENSMUST00000046901.14	1543	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	166.22140522675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCTTGGATGACATTT	NA	False	NA	NA	False	NA	NA	NA	138980708	138962270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138962983_138964376_138964446_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUST00000046908.10	chr2	-	1620	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	31.0268700752536	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTGTGTTGTTTCTT	NA	False	NA	-4	True	NA	NA	NA	163261448	163247741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
ENSMUST00000046916.9	chr8	-	2593	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAACAAATGAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	22675835	22658175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ENSMUST00000046916.9-0	chr8	-	2308	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	0	285	0	0	multi-exon	FALSE	canonical	3	249	junction_6	17.1973835219198	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTGATTGACTTATT	NA	False	NA	-1	True	AATAAA	-26	NA	22675835	22658460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ENSMUST00000046929.7	chr7	-	10198	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATTTGTCTTTTCTCTCC	NA	False	NA	-1	True	AATAAA	-27	NA	121306476	121241243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ENSMUST00000046929.7-0	chr7	-	6503	16	FSM	ENSMUSG00000063317.8	ENSMUST00000046929.7	10198	16	-189	3884	-189	-3884	multi-exon	FALSE	canonical	3	25	junction_6	9.44363395215117	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATGGAGTTTAGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	121306665	121245127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121248975_121250704_121250858_121252324_121252484_121258110_121258337_121260568_121260689_121266026_121266157_121267010_121267089_121268877_121268973_121269435_121269548_121272299_121272478_121274078_121274224_121276464_121276601_121277329_121277423_121277515_121277602_121278607_121278746_121305858
ENSMUST00000046945.13	chr10	+	2651	9	FSM	ENSMUSG00000035863.15	ENSMUST00000046945.13	2651	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	77.7495980697007	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	79629405	79656730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79652625_79652758_79654874
ENSMUST00000046948.10	chr18	+	3202	9	FSM	ENSMUSG00000040957.16	ENSMUST00000046948.10	3202	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.1357967126418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTTGAAGAGAGCCTG	NA	False	NA	NA	False	NA	NA	NA	11972330	12078621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
ENSMUST00000046950.13	chrX	+	5728	22	FSM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	12.6336842339938	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150304182	150416855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ENSMUST00000046951.10	chr13	+	1722	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_5	43.1108247413169	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCTTAATTACATTTAT	NA	False	NA	NA	False	AGTAAA	-28	NA	41154498	41166491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ENSMUST00000046955.7	chr11	+	2002	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	21.86601127274	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTGGAGGCGTTGA	2471	False	NA	8	True	AATAAA	-10	NA	17161917	17183796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ENSMUST00000046963.10	chr11	-	3695	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_10	28.4703354388388	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTCTGGTTCTTTTCT	NA	False	NA	-1	True	ATTAAA	-42	NA	65679123	65579068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
ENSMUST00000046974.5	chr13	+	1798	10	FSM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	4.29469957557504	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAGACACATTCCTGCA	NA	False	NA	NA	False	ATTAAA	-21	NA	50571899	50587805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
ENSMUST00000046975.12	chr5	+	5088	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	0	2620	0	-2620	multi-exon	FALSE	canonical	3	114	junction_9	9.83666610188635	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTGGCAATGTT	NA	False	NA	NA	False	AATAAA	-25	NA	108609097	108652222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ENSMUST00000046983.10	chr7	+	2412	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.53534100123922	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTCCTATTTCTTCTTCC	NA	False	NA	11	True	AATAAA	-21	NA	105203566	105207596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
ENSMUST00000046999.12	chr5	+	1096	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	392	5	0	0	multi-exon	FALSE	canonical	3	445	junction_1	65.8634952003004	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038544	135041024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUST00000047028.9	chr11	-	3362	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_4	26.8269920043228	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCTGGGTTATTACAT	NA	False	NA	-3	True	AATAAA	-17	NA	20781056	20773575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ENSMUST00000047036.10	chr7	-	1878	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	0	361	0	-361	multi-exon	FALSE	canonical	3	228	junction_1	10	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCTGTTTGGAATGG	2158	False	NA	-23	True	ATTAAA	-10	NA	19093406	19090299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19091942_19093014_19093157_19093312
ENSMUST00000047037.15	chrX	-	7622	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	0	0	0	0	multi-exon	FALSE	canonical	2	149	junction_20	23.0069843664894	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTATATTGTTACTT	NA	False	NA	1	True	AATAAA	-26	NA	41000778	40883867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ENSMUST00000047057.9	chr19	+	1353	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGGTAGCATGTTTCC	3692	False	NA	NA	False	ATTAAA	-19	NA	45549053	45566726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ENSMUST00000047057.9-0	chr19	+	823	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	20	510	0	234	multi-exon	FALSE	canonical	3	416	junction_3	22.5601418435257	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGTGTATTGCCCGC	3712	False	NA	36	True	AGTAAA	-43	NA	45549073	45566216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ENSMUST00000047085.16	chr7	-	2177	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	164	6409	0	0	multi-exon	FALSE	canonical	3	189	junction_4	26.4359485360371	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCTGGCTGGCATCAGG	7867	False	NA	-10	True	AATAAA	-15	NA	44498335	44490455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ENSMUST00000047086.10	chr17	+	3450	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_7	117.232918130641	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923209	71966026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ENSMUST00000047091.14	chr7	-	2581	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	39.4138300600183	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACCTTGGCTAGATTC	NA	False	NA	1	True	AATAAA	-34	NA	112968546	112914832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
ENSMUST00000047099.13	chr9	+	3685	12	FSM	ENSMUSG00000041064.15	ENSMUST00000047099.13	3685	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCTCCTGCCTGGTCT	NA	False	NA	27	True	AATAAA	-17	NA	65494486	65503249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ENSMUST00000047131.16	chr14	-	3846	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	76.4571487859417	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCCAGTGAGGCAGGAT	9745	False	NA	NA	False	AAAAAG	-5	NA	55873141	55862856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ENSMUST00000047144.13	chr15	-	6845	10	FSM	ENSMUSG00000036046.15	ENSMUST00000047144.13	6845	10	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	21.5893206338712	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGAAGTCCAGTGATTC	NA	False	NA	74	True	AATAAA	-37	NA	84872201	84828136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ENSMUST00000047144.13-0	chr15	-	2781	10	FSM	ENSMUSG00000036046.15	ENSMUST00000165743.2	5032	10	-29	2280	0	0	multi-exon	FALSE	canonical	3	237	junction_4	21.5893206338712	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCCTCAGTTTGCC	NA	False	NA	-12	True	ATTAAA	-17	NA	84872201	84832200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ENSMUST00000047145.14	chr11	-	3432	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	5.01996015920445	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48708180	48697230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
ENSMUST00000047145.14-0	chr11	-	2310	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	1122	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	5.01996015920445	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGGACTCTTTTA	NA	False	NA	-25	True	AATAAA	-18	NA	48707058	48697230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
ENSMUST00000047157.13	chr7	+	5927	19	FSM	ENSMUSG00000042308.15	ENSMUST00000047157.13	5927	19	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_7	11.9666460332021	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATGCTTGGTCAGTA	NA	False	NA	10	True	ATTAAA	-10	NA	127376560	127399287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127376686_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ENSMUST00000047168.13	chr17	+	2089	19	FSM	ENSMUSG00000041119.13	ENSMUST00000047168.13	2089	19	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_18	8.45777456647338	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGTGTGCATGTGTCCT	NA	False	NA	NA	False	ATTAAA	-22	NA	31605183	31695284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694898
ENSMUST00000047173.10	chr9	+	2731	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAATTTTCCTGTCT	13	False	NA	5	True	ATTAAA	-13	NA	4383534	4386861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_4384143_4384738
ENSMUST00000047177.4	chr2	+	956	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	False	NA	15	True	AATAAA	-19	NA	148514545	148517947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_148514756_148517201
ENSMUST00000047179.7	chr17	+	3283	12	FSM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_6	142.469309439723	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1236	False	NA	12	True	AATAAA	-20	NA	24888720	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ENSMUST00000047186.10	chr11	-	3338	12	FSM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_4	24.2817484087354	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109502258	109465957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUST00000047196.14	chr5	+	1398	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	5	1405	0	0	multi-exon	FALSE	canonical	3	37	junction_1	28.2460616723819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGTGTGTACTGTAA	3417	False	NA	4	True	NA	NA	NA	134961226	134970086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUST00000047203.9	chr10	-	1639	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_4	92.4302946819927	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGTGTCCATGACTG	NA	False	NA	20	True	AATACA	-43	NA	79602786	79594348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ENSMUST00000047206.7	chr17	+	6882	30	FSM	ENSMUSG00000040852.7	ENSMUST00000047206.7	6882	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	2.89449845123218	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATCTTTTGAATAATCT	NA	False	NA	NA	False	AATAAA	-24	NA	84819322	84929566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_84819393_84829123_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
ENSMUST00000047218.5	chr14	+	1565	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	37.0515360886781	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	6567	False	NA	30	True	AATAAA	-26	NA	70782793	70786373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ENSMUST00000047226.10	chr17	-	2951	18	FSM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_15	77.1963747647298	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ENSMUST00000047232.14	chr2	+	7359	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGTTTACAGAACCTTT	487	False	NA	5	True	AATAAA	-17	NA	75662520	75761694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ENSMUST00000047232.14-0	chr2	+	5561	20	FSM	ENSMUSG00000042410.17	ENSMUST00000047232.14	7359	20	98	1700	86	-1700	multi-exon	FALSE	canonical	3	643	junction_12	64.0151038271871	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGTGTGGAGCTGTTTTT	585	False	NA	22	True	AATAAA	-33	NA	75662618	75759994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ENSMUST00000047242.9	chr1	+	3474	15	FSM	ENSMUSG00000034292.14	ENSMUST00000047242.9	3474	15	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_5	6.41943795619752	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATGGACTGTCAAATTT	8984	False	NA	8	True	ATTAAA	-24	NA	91422415	91457029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91446015_91446037_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
ENSMUST00000047247.12	chr19	+	4731	21	FSM	ENSMUSG00000041180.14	ENSMUST00000047247.12	4731	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	6.40683229060977	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTTCATTTTTTTAAA	NA	False	NA	12	True	ATTAAA	-19	NA	36532068	36598535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578831_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ENSMUST00000047273.3	chr17	+	1745	6	FSM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	16.0299719276111	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGACCATGAGCATATCT	NA	False	NA	24	True	AATAAA	-21	NA	25946690	25950438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUST00000047281.10	chr8	+	902	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	163	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753451	85756915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85753864_85756167_85756246_85756503
ENSMUST00000047285.7	chr3	+	2799	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	8.73053390247253	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCTGTCGTCACTT	NA	False	NA	17	True	ATTAAA	-21	NA	103716943	103729341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ENSMUST00000047311.16	chr13	+	2905	13	FSM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	4.03026742978125	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTGTATCAAGACG	NA	False	NA	NA	False	AATAAA	-43	NA	30320471	30430700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
ENSMUST00000047321.9	chr7	+	2908	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	14.0300429530047	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	3747	False	NA	NA	False	AATAAA	-20	NA	112806671	112913333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ENSMUST00000047322.8	chr18	+	3209	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	21.3625378803961	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3291	False	NA	9	True	ATTAAA	-31	NA	11790485	11875935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ENSMUST00000047328.11	chr1	+	1307	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	0	0	0	0	multi-exon	FALSE	canonical	3	3391	junction_2	148.912353043288	2704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTCTTACTTGAGTC	1290	False	NA	18	True	AATAAA	-3	NA	72863661	72891633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
ENSMUST00000047348.11	chr15	+	3646	19	FSM	ENSMUSG00000037617.13	ENSMUST00000047348.11	3646	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	18.7185950987016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCCTGCGTGTCTGTAT	182	False	NA	NA	False	AATAAA	-25	NA	36179513	36235767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_36179729_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ENSMUST00000047349.8	chr9	+	4133	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_8	78.9995812484415	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896764	48953810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ENSMUST00000047356.11	chr7	-	1816	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	35.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTTATCTTTGA	9686	False	NA	0	True	AATAAA	-19	NA	44466082	44461679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44462945_44464412_44464707_44465825
ENSMUST00000047357.10	chr12	+	5732	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATGTTTCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	101942246	101972683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ENSMUST00000047357.10-0	chr12	+	3286	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	0	2446	0	-2446	multi-exon	FALSE	canonical	3	176	junction_8	15.7246718923623	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAGCCTCTAAGCTG	NA	False	NA	NA	False	AATAAA	-9	NA	101942246	101970237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ENSMUST00000047363.14	chr13	+	4396	34	FSM	ENSMUSG00000037851.14	ENSMUST00000047363.14	4396	34	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	328.385946197822	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835605	49887743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865312_49868288_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ENSMUST00000047368.8	chr3	-	875	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	22.7497476998793	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063093	83995239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ENSMUST00000047373.6	chr11	+	861	2	FSM	ENSMUSG00000041287.6	ENSMUST00000047373.6	861	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCCCATTTGTAT	NA	False	NA	24	True	ATTAAA	-17	NA	69546139	69547553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69546726_69547278
ENSMUST00000047404.7	chr9	+	2601	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_8	45.3210767744986	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGGTCAAATAACGTG	2126	False	NA	3	True	AATAAA	-16	NA	114517857	114553370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
ENSMUST00000047405.9	chr15	+	4725	31	FSM	ENSMUSG00000022488.10	ENSMUST00000047405.9	4725	31	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_9	3.63027394130097	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCGTGGATGTTTGCTT	NA	False	NA	10	True	ATTAAA	-24	NA	103362253	103407237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_103362409_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ENSMUST00000047419.8	chr15	+	837	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	54.5119762580257	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	False	NA	21	True	AATAAA	-21	NA	83447792	83458404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
ENSMUST00000047429.9	chr16	+	846	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	10.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACGGCTGTATTGCTTCT	6285	False	NA	5	True	AATAAA	-17	NA	91855157	91909115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91855369_91896481_91896622_91908620
ENSMUST00000047431.11	chr4	+	4384	21	FSM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_1	9.66643677887566	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647562	126748129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ENSMUST00000047436.11	chr17	-	1504	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_10	38.5186643070603	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	794	False	NA	-21	True	AATAAA	-14	NA	23892816	23887591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ENSMUST00000047443.5	chr6	-	2376	4	FSM	ENSMUSG00000032718.5	ENSMUST00000047443.5	2376	4	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	3.09120616516523	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCTGGATAGCTTTCAA	NA	False	NA	NA	False	AATAAA	-21	NA	134609451	134586169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134587815_134594279_134594421_134598695_134599013_134609178
ENSMUST00000047485.15	chr5	-	3677	10	FSM	ENSMUSG00000040570.15	ENSMUST00000047485.15	3677	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	10.9352753469485	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGTCTTTTTCCTTGA	NA	False	NA	1	True	ATTAAA	-19	NA	8672952	8540333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_8542590_8544783_8544906_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ENSMUST00000047490.6	chr14	-	3305	13	FSM	ENSMUSG00000039308.7	ENSMUST00000047490.6	3305	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	8.7781293881758	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTCTGTTTTGTCTG	NA	False	NA	-10	True	AATAAA	-6	NA	20780395	20773806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233
ENSMUST00000047497.15	chr4	+	5151	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTCACTTTTATTA	NA	False	NA	13	True	AGTAAA	-10	NA	154059650	154093189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ENSMUST00000047497.15-0	chr4	+	3640	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	0	1511	0	-1511	multi-exon	FALSE	canonical	3	70	junction_14	10.5677814386534	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCTATTCTAAGAGCAG	NA	False	NA	NA	False	AATAAA	-16	NA	154059650	154091678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ENSMUST00000047498.15	chr2	+	792	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAAATGCAGATTTCTAA	NA	False	NA	NA	False	TATAAA	-16	NA	122479769	122483111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
ENSMUST00000047498.15-0	chr2	+	621	5	FSM	ENSMUSG00000033213.17	ENSMUST00000047498.15	792	5	65	106	0	0	multi-exon	FALSE	canonical	3	117	junction_4	21.9146070008111	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	False	NA	23	True	AATAAA	-25	NA	122479834	122483005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122479862_122479991_122480054_122480176_122480263_122481135_122481197_122482620
ENSMUST00000047502.9	chr3	+	3394	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	66.6243615770955	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTGTGTATGTT	8785	False	NA	NA	False	AATAAA	-20	NA	30656785	30672517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ENSMUST00000047503.16	chr17	+	3252	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	23.5177912481234	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3234	False	NA	12	True	AATAAA	-18	NA	34148555	34156661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ENSMUST00000047510.10	chr6	-	3213	20	FSM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	195.368477767687	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7856	False	NA	-8	True	AATAAA	-15	NA	124806447	124791981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ENSMUST00000047511.15	chr19	-	3974	17	FSM	ENSMUSG00000041362.18	ENSMUST00000047511.15	3974	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	2.31081019341702	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTGTTTCTCTGACTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	59064532	58961927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_58963641_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59063886
ENSMUST00000047521.7	chr2	+	2715	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	4.78288961380578	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACAGCTGAGCCTCTTT	NA	False	NA	19	True	AATAAA	-30	NA	29759505	29772852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUST00000047524.10	chr17	-	7784	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	0	0	0	0	multi-exon	TRUE	canonical	2	39	junction_31	15.529655412283	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCATCTCACATTGGC	NA	False	NA	-39	True	AATAAA	-17	NA	84773544	84497503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ENSMUST00000047524.10-0	chr17	-	6482	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	-89	1391	0	70	multi-exon	FALSE	canonical	2	39	junction_31	15.529655412283	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGGGTATGTTTGATTC	NA	False	NA	-47	True	TATAAA	-17	NA	84773633	84498894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ENSMUST00000047526.8	chr4	+	4225	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	6.55532014643238	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTCTGGTGATTGGAAAG	1322	False	NA	NA	False	NA	NA	NA	135933675	135972527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ENSMUST00000047531.16	chr6	+	1562	4	FSM	ENSMUSG00000039958.18	ENSMUST00000047531.16	1562	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.6141675934562	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACTCAAGTGTTATC	NA	False	NA	NA	False	NA	NA	NA	149043010	149052669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_149043203_149045531_149045941_149048655_149048787_149051839
ENSMUST00000047534.12	chr1	-	5030	7	FSM	ENSMUSG00000037503.13	ENSMUST00000047534.12	5030	7	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_3	28.4702573847789	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882146	34852306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ENSMUST00000047558.14	chr7	+	3016	14	FSM	ENSMUSG00000038943.17	ENSMUST00000047558.14	3016	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	336.527023981466	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944198	79966007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962957_79964861
ENSMUST00000047560.8	chr11	-	1254	7	FSM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	7.19760762722973	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCCCCCCCCAGCTCT	NA	False	NA	NA	False	NA	NA	NA	84719790	84711681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716404_84719576
ENSMUST00000047577.7	chr1	-	2564	8	FSM	ENSMUSG00000042414.8	ENSMUST00000047577.7	2564	8	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_7	84.2663415993041	658	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACACTTATGCTAC	NA	False	NA	-58	True	AATAAA	-10	NA	13197387	13183680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389_13196081_13197333
ENSMUST00000047611.4	chr17	+	1079	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	26.3772629360971	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	908	False	NA	11	True	AATAAA	-23	NA	24851655	24857811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ENSMUST00000047615.15	chr1	+	3059	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	11.1563813017483	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	9	True	AATAAA	-16	NA	72622409	72672293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ENSMUST00000047616.10	chr11	-	1668	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	32.356761271796	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734275	116728257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUST00000047620.3	chr4	+	1923	8	FSM	ENSMUSG00000034871.3	ENSMUST00000047620.3	1923	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.64189171555813	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACTGTGTAAGACCTGGG	2113	False	NA	4	True	NA	NA	NA	106591085	106605489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106591286_106592646_106592794_106599341_106599495_106600393_106600554_106602669_106602895_106603252_106603393_106604169_106604314_106604735
ENSMUST00000047621.14	chr7	+	3130	13	FSM	ENSMUSG00000040734.15	ENSMUST00000047621.14	3130	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	11.000946928939	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACATCATTTTGATT	414	False	NA	NA	False	AATAAA	-15	NA	19095140	19112458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19095242_19102466_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649_19109817_19111412_19111613_19111891
ENSMUST00000047627.14	chr13	-	3694	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626645	111562213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUST00000047627.14-0	chr13	-	2947	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	269	478	186	0	multi-exon	FALSE	canonical	3	874	junction_7	122.771100245765	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626376	111562691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUST00000047629.7	chr8	+	2232	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	0	0	0	0	multi-exon	TRUE	canonical	3	1046	junction_1	100.936996902771	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAGACATTTTAAATTA	NA	False	NA	12	True	AATAAA	-17	NA	107620282	107649720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ENSMUST00000047632.14	chr2	-	2971	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTTTTTATTTGTGT	NA	False	NA	NA	False	TTTAAA	-3	NA	26792891	26780446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
ENSMUST00000047632.14-0	chr2	-	2634	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	0	337	0	0	multi-exon	FALSE	canonical	3	256	junction_1	26.2154534578367	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGTTCGTATTTG	NA	False	NA	-6	True	NA	NA	NA	26792891	26780783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
ENSMUST00000047652.6	chr14	-	2475	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	0	0	0	0	multi-exon	TRUE	canonical	3	610	junction_1	26.6868413267663	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGTGATAAATTGAGC	NA	False	NA	49	True	ATTAAA	-18	NA	40688764	40628401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ENSMUST00000047655.7	chrX	+	1111	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.69258240356725	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGCTGACTAGAACTAC	NA	False	NA	NA	False	AAAACA	-13	NA	36007311	36040855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
ENSMUST00000047664.16	chr1	+	3287	10	FSM	ENSMUSG00000037509.22	ENSMUST00000047664.16	3287	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	6.35959467611297	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTGAGCCCATCTACT	NA	False	NA	NA	False	AATAAA	-18	NA	34840784	34852390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ENSMUST00000047672.9	chr10	-	1959	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	0	0	0	0	multi-exon	FALSE	canonical	3	1936	junction_8	229.468312990414	2733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTCTTACTGATCTGT	NA	False	NA	-11	True	AATAAA	-19	NA	116899719	116886905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUST00000047677.9	chr5	+	5336	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_16	11.5130804048336	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAGAAGAAAAATGATAG	1143	False	NA	NA	False	NA	NA	NA	108280779	108381494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ENSMUST00000047687.9	chr9	+	3453	11	FSM	ENSMUSG00000041608.9	ENSMUST00000047687.9	3453	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	3.21869538788622	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTATCTTAATTTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	120368883	120397393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_120368950_120369717_120369770_120373024_120373153_120383134_120383253_120384710_120384862_120386457_120386618_120387401_120387636_120389546_120389820_120389986_120390098_120390964_120391103_120395371
ENSMUST00000047689.11	chr11	-	2961	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	109.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTGTAGTCTGTTTG	NA	False	NA	79	True	TTTAAA	-38	NA	11758959	11750287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_11753064_11756095_11756216_11758894
ENSMUST00000047704.8	chr19	-	2548	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	15.9123876785558	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	175	False	NA	NA	False	AATAAA	-16	NA	15962353	15933137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ENSMUST00000047711.13	chr10	-	2946	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	-53	1586	0	-1586	multi-exon	FALSE	canonical	3	26	junction_7	11.4039285676849	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3411	False	NA	0	True	AATAAA	-19	NA	93871663	93805547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ENSMUST00000047714.14	chr1	+	6268	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	36	2410	0	1353	multi-exon	FALSE	canonical	0	0	junction_3	194.173731152858	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAACCCAGTGGTCTG	6751	False	NA	16	True	ATTAAA	-8	NA	134487944	134560613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUST00000047721.10	chr9	+	1586	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_11	74.9465115388084	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	False	NA	23	True	ATTAAA	-23	NA	106354467	106362623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUST00000047726.12	chr14	+	1395	4	FSM	ENSMUSG00000072572.10	ENSMUST00000047726.12	2334	4	0	939	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTGCAATTCTGCC	NA	False	NA	14	True	AATAAA	-25	NA	52131066	52133263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52131372_52131545_52131677_52131912_52131964_52132355
ENSMUST00000047734.15	chr1	+	4933	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATATCACTTAGTCTCT	NA	False	NA	16	True	AATAAA	-29	NA	136552638	136557791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_136552790_136553009
ENSMUST00000047737.10	chr8	+	2847	9	FSM	ENSMUSG00000041515.11	ENSMUST00000047737.10	2847	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	7.56637297521078	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTTGTTTCTTTTTT	NA	False	NA	18	True	ATTAAA	-22	NA	121463096	121483433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121463149_121466555_121466731_121470444_121470629_121472358_121472448_121473941_121474048_121475037_121475086_121480091_121480473_121481126_121481243_121481737
ENSMUST00000047746.13	chr9	-	4722	39	FSM	ENSMUSG00000041528.16	ENSMUST00000047746.13	4722	39	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_29	21.0582229417063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956500	107928875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946482_107946870_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ENSMUST00000047749.7	chr8	-	1587	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	19.3045763140937	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCATACCAGTGTGG	NA	False	NA	94	True	ATTAAA	-21	NA	86159462	86135387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
ENSMUST00000047753.5	chr5	+	4997	28	FSM	ENSMUSG00000040584.9	ENSMUST00000047753.5	4997	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	64.0965278576142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATGGTTATGTAAGTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	8710076	8798575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8710223_8710661_8710733_8714545_8714595_8724682_8724843_8733383_8733436_8735220_8735413_8736126_8736299_8744065_8744191_8748485_8748658_8751608_8751723_8751866_8751978_8752152_8752279_8752368_8752573_8752792_8752964_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ENSMUST00000047768.11	chr8	-	2253	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	6.19039478985961	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCTTTTGTAAGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	54092100	54039901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ENSMUST00000047783.14	chr8	-	6638	26	FSM	ENSMUSG00000033282.15	ENSMUST00000047783.14	7009	26	0	371	0	-371	multi-exon	FALSE	canonical	2	7	junction_9	4.90126514279732	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTGTTCCTGCCATTC	NA	False	NA	NA	False	AATAAA	-43	NA	92039890	91944028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979109_91979206_91979482_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669_92034815_92036965_92037058_92039830
ENSMUST00000047799.13	chr9	+	3444	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	6.62112793865633	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTTTCAGTCCTAAA	NA	False	NA	92	True	NA	NA	NA	103940884	104004924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
ENSMUST00000047812.8	chr2	-	5268	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAAAACACAAGCATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	62242575	62160416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ENSMUST00000047812.8-0	chr2	-	3254	26	FSM	ENSMUSG00000035000.9	ENSMUST00000047812.8	5268	26	372	1642	0	-1642	multi-exon	FALSE	canonical	3	167	junction_12	33.8302586451833	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATGTTTTGTGTTATT	NA	False	NA	-39	True	ATTAAA	-39	NA	62242203	62162058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774_62216867_62217408_62217505_62241558_62241644_62242129
ENSMUST00000047815.13	chr2	+	4521	17	FSM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	0	0	0	0	multi-exon	TRUE	non_canonical	2	49	junction_9	20.9574531790005	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263631	167318920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUST00000047816.15	chr15	-	2963	16	FSM	ENSMUSG00000042632.18	ENSMUST00000047816.15	2963	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	63.160817671155	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212428	79170427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
ENSMUST00000047835.8	chr15	-	5766	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	59.5770809240313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTGTTAATTTGTTG	NA	False	NA	-20	True	NA	NA	NA	96358724	96311536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ENSMUST00000047852.8	chrX	+	8299	6	FSM	ENSMUSG00000042595.8	ENSMUST00000047852.8	8299	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	9.32523458149981	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCATGTGTGTGTTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	135950342	135983252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135950819_135963406_135963627_135972247_135972398_135972762_135972925_135974637_135974905_135976228
ENSMUST00000047857.16	chr5	-	2858	11	FSM	ENSMUSG00000039753.17	ENSMUST00000047857.16	2858	11	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	32.2155242080584	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8828	False	NA	-1	True	AATAAA	-28	NA	43939492	43901957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUST00000047860.9	chr5	-	2288	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	16.2138486760204	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCCATGTATCTGTGA	NA	False	NA	69	True	AATAAA	-14	NA	77457931	77442028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
ENSMUST00000047864.11	chr10	+	3089	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	0	0	0	0	multi-exon	TRUE	canonical	3	5618	junction_10	706.418033369635	13353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2181	False	NA	32	True	AATAAA	-20	NA	81012464	81018332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ENSMUST00000047873.16	chr7	+	3212	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	58.1352662647508	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGTGTGTGTGAGG	8554	False	NA	31	True	AATATA	-13	NA	24602461	24626014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUST00000047875.16	chr7	+	3131	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	0	3449	0	0	multi-exon	FALSE	canonical	3	73	junction_5	8.32971086202773	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGCCTTTATACATGC	NA	False	NA	9	True	AATATA	-16	NA	120442053	120503224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ENSMUST00000047883.11	chr10	-	3638	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	0	0	0	0	multi-exon	TRUE	canonical	3	242	junction_7	11.6303613925986	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTGGTGTTTTATCA	4876	False	NA	NA	False	NA	NA	NA	62067030	62021174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ENSMUST00000047883.11-0	chr10	-	1679	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	0	1959	0	354	multi-exon	FALSE	canonical	3	242	junction_7	11.6303613925986	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTGTTTGGAAGTCT	4876	False	NA	0	True	AATAAA	-27	NA	62067030	62023133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ENSMUST00000047885.14	chr10	-	2743	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	12.7305190664984	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294548	34179604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUST00000047889.13	chr11	-	2842	7	FSM	ENSMUSG00000041329.14	ENSMUST00000047889.13	2842	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_6	5.18544972870135	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGAGCCCTGTGTGTG	NA	False	NA	-7	True	AATAAA	-33	NA	69496655	69490561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69492239_69492350_69492450_69493250_69493308_69493525_69493732_69493832_69493938_69494250_69494380_69496086
ENSMUST00000047899.13	chr14	+	1623	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	48.1261901412816	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGATGTTCTGATTGC	NA	False	NA	NA	False	AATAAA	-16	NA	52122298	52129325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ENSMUST00000047903.10	chr8	+	3207	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_9	75.1827525499814	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063641	72077555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ENSMUST00000047906.10	chr3	+	4191	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	12.4835892274618	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATTTCAGTGTAATGAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	65435830	65462939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ENSMUST00000047910.15	chr10	-	4424	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	0	0	0	0	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGGAGTGAAAGACCAGT	NA	False	NA	-14	True	AATAAA	-23	NA	93725676	93694350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ENSMUST00000047910.15-0	chr10	-	1978	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	6	2440	0	0	multi-exon	FALSE	canonical	3	2022	junction_3	150.158882521148	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	False	NA	-17	True	AATAAA	-15	NA	93725670	93696790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ENSMUST00000047923.12	chr3	+	3903	23	FSM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	11.2449253935915	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123061103	123159290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ENSMUST00000047935.8	chr10	+	3879	1	FSM	ENSMUSG00000039485.9	ENSMUST00000047935.8	3879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTCTGGGTGAATGT	NA	False	NA	NA	False	AATAAA	-7	NA	34173437	34177316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_34173400_34177300
ENSMUST00000047947.9	chr9	+	1429	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.8309578326385	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926523	107928901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUST00000047950.6	chr4	-	9986	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATAATGTTTTGTTCAT	-19	True	NA	5	True	AATAAA	-37	NA	34882960	34803112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ENSMUST00000047950.6-1	chr4	-	9734	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	30	222	0	-222	multi-exon	FALSE	canonical	3	109	junction_4	23.430313524081	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACCGTAATTTCTTTT	11	True	NA	-1	True	AATAAA	-15	NA	34882930	34803334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ENSMUST00000047951.9	chr4	+	1288	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	6.34350061086148	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCACAGATGAATGGACATC	NA	False	NA	23	True	NA	NA	NA	148245077	148250881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ENSMUST00000047970.14	chr17	-	4885	20	FSM	ENSMUSG00000032842.14	ENSMUST00000047970.14	4885	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	9.55491490762564	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTCTGTGTTTTAAAAAA	7156	False	NA	-6	True	GATAAA	-12	NA	46638905	46614158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46614579_46614838_46614952_46615082_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ENSMUST00000047973.4	chr4	+	4028	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_6	36.7353287041235	905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGTCATTTATTCAG	NA	False	NA	18	True	AATAAA	-18	NA	106418234	106446310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ENSMUST00000047978.9	chr1	+	2861	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTGGCGAGATGGCTCA	6638	False	NA	NA	False	ATTAAA	-13	NA	134422385	134436512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134422548_134433813
ENSMUST00000047978.9-0	chr1	+	1972	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	0	889	0	-889	multi-exon	FALSE	canonical	3	479	junction_1	0	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCATCTGTTTTCTGG	6638	False	NA	NA	False	ATTAAA	-1	NA	134422385	134435623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134422548_134433813
ENSMUST00000048001.8	chr13	+	2992	16	FSM	ENSMUSG00000042102.8	ENSMUST00000048001.8	2992	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.8720878971384	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGACAGACTTGCTTTA	2474	False	NA	NA	False	AATAAA	-28	NA	93810940	93889341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_93811041_93813542_93813712_93823435_93823535_93825032_93825198_93828379_93828585_93840294_93840544_93843138_93843338_93845180_93845351_93845689_93845844_93847800_93847967_93848553_93848685_93851965_93852184_93854062_93854221_93857066_93857127_93880800_93880936_93888727
ENSMUST00000048002.7	chr7	+	3556	20	FSM	ENSMUSG00000055629.6	ENSMUST00000048002.7	3556	20	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_14	21.3235203654468	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140641016	140652313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
ENSMUST00000048010.9	chr10	-	4389	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	20.6164982477626	536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTCTCCTGCTCTGGTG	NA	False	NA	-10	True	AATAAA	-14	NA	34083711	34027388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ENSMUST00000048015.14	chr7	-	4333	4	FSM	ENSMUSG00000012640.17	ENSMUST00000048015.14	4333	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	3.29983164553722	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42960910	42945946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454
ENSMUST00000048016.3	chr14	+	4163	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCTTTATTACATT	NA	False	NA	NA	False	AATAAA	-23	NA	20745035	20751084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20745767_20745855_20746482_20748278
ENSMUST00000048028.15	chr5	+	4211	34	FSM	ENSMUSG00000036928.15	ENSMUST00000048028.15	4211	34	0	0	0	0	multi-exon	FALSE	canonical	2	72	junction_1	21.1857845161499	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278787	138310655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ENSMUST00000048043.12	chr9	-	3610	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	4.75342416814595	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTATCAAGCCATGTT	9358	False	NA	-7	True	AATAAA	-19	NA	62444326	62326773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ENSMUST00000048054.14	chr17	-	3214	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_21	100.708127696462	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTGGGGAGTGTCAGT	5674	False	NA	NA	False	NA	NA	NA	25946393	25937899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ENSMUST00000048068.15	chr7	-	3905	8	FSM	ENSMUSG00000042659.16	ENSMUST00000048068.15	3905	8	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	213.33809518495	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGTGGCTCATTTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	68398989	68386742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_68389282_68389632_68389788_68390702_68390866_68391392_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ENSMUST00000048073.9	chr11	+	2501	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_10	36.2694234084327	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATAACTCGTTCTTGT	NA	False	NA	28	True	NA	NA	NA	78219240	78233608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ENSMUST00000048079.14	chr7	-	3443	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	97.8877751760945	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049209	105027817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ENSMUST00000048099.5	chr10	+	6002	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	22.4499443206436	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTTTTTAAATTAA	NA	False	NA	16	True	AATAAA	-16	NA	127512934	127536918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ENSMUST00000048112.13	chr5	-	5161	25	FSM	ENSMUSG00000042216.14	ENSMUST00000048112.13	5161	25	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_24	23.4519307425968	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGGTCTGGTTATTTGT	NA	False	NA	0	True	AATATA	-19	NA	113458652	113391085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689_113436766_113458413_113458458_113458539
ENSMUST00000048116.15	chr5	-	7179	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_1	51.9975293216472	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTGTGGTCTCAAGC	5418	False	NA	-3	True	AATAAA	-20	NA	148336714	148264219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ENSMUST00000048128.15	chr10	+	2999	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	307	2632	0	1132	multi-exon	FALSE	canonical	3	9	junction_1	37	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTCCGGTAGAATCCACT	NA	False	NA	6	True	AATAAA	-15	NA	80972411	80985424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80972534_80979795_80981052_80983803
ENSMUST00000048129.6	chr14	-	4916	23	FSM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_22	14.3650747266008	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTCTGAGAGAATATT	NA	False	NA	-14	True	AATAAA	-18	NA	70666543	70609925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666391
ENSMUST00000048134.16	chr3	-	6259	22	FSM	ENSMUSG00000036834.17	ENSMUST00000048134.16	6259	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	7.07427391849672	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATTTTGTTTATAAAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	63758460	63603654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_63606902_63609204_63609560_63611554_63611635_63611937_63612085_63615137_63615223_63616941_63617067_63618384_63618493_63618588_63618769_63623404_63623503_63626608_63626701_63628593_63628666_63630170_63630333_63639037_63639146_63648043_63648216_63651899_63652021_63660548_63660753_63662672_63662767_63674877_63675049_63681061_63681192_63688732_63688977_63691411_63691559_63758343
ENSMUST00000048139.12	chr11	-	1891	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	29.7960143162773	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	False	NA	-4	True	TATAAA	-15	NA	69470150	69452584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ENSMUST00000048147.9	chr8	+	823	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	0	1978	0	0	multi-exon	FALSE	canonical	3	102	junction_1	177.95698216142	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATTTGAAGTCAAT	NA	False	NA	2	True	AATAAA	-20	NA	80438448	80501971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUST00000048155.16	chr12	+	4226	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	109.211215111695	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3981	False	NA	13	True	AATAAA	-13	NA	83679025	83729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ENSMUST00000048162.10	chr4	+	2823	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	False	NA	64	True	ATTAAA	-15	NA	129355373	129382291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ENSMUST00000048162.10-0	chr4	+	2720	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	103	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	13.6088206689632	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	False	NA	64	True	ATTAAA	-15	NA	129355476	129382291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ENSMUST00000048184.4	chr9	+	2419	5	FSM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	28.3846349280733	526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCCCCTGATTTATT	NA	False	NA	42	True	AATAAA	-25	NA	65253385	65266925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
ENSMUST00000048187.6	chr7	+	540	4	FSM	ENSMUSG00000037166.6	ENSMUST00000048187.6	950	4	0	410	0	-410	multi-exon	FALSE	canonical	3	93	junction_2	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCCGGATTTTCC	4007	False	NA	8	True	NA	NA	NA	28988736	28992816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28988961_28990934_28991016_28991475_28991509_28992614
ENSMUST00000048192.9	chr18	-	1003	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_6	88.5180066427165	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTGTTATCTGTTGCT	NA	False	NA	-1	True	AATACA	-19	NA	77855480	77845267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ENSMUST00000048197.10	chr19	-	1125	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	11	208	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.02336923485777	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGTGTCCTGACTCTTC	9159	False	NA	-4	True	ACTAAA	-15	NA	4489449	4475694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUST00000048209.16	chr7	+	1588	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	6684	junction_1	674.726490316405	8559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495262	46505051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUST00000048216.6	chr8	+	5074	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGAGTCTTATTCTAAT	NA	False	NA	19	True	AATAAA	-20	NA	10027716	10042155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_10028020_10037384
ENSMUST00000048216.6-0	chr8	+	2921	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	0	2153	0	-2153	multi-exon	FALSE	canonical	3	144	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTTTGCTATGTAGAA	NA	False	NA	8	True	ATTAAA	-18	NA	10027716	10040002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_10028020_10037384
ENSMUST00000048249.8	chr17	+	528	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	7458	junction_2	513.174650798558	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTCTTAGTATTTA	4074	False	NA	33	True	AATATA	-24	NA	34043545	34057291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
ENSMUST00000048250.10	chrX	+	6364	9	FSM	ENSMUSG00000035476.10	ENSMUST00000048250.10	6364	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	26.186828750347	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	84617627	84678075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_84617772_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
ENSMUST00000048260.15	chr18	-	3581	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	125.2370060817	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTCTGTATCCTGCTG	NA	False	NA	-3	True	AATAAA	-34	NA	66135710	66113808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUST00000048263.14	chr14	+	6351	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_1	98.1423286185256	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395884	34469940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ENSMUST00000048274.11	chr4	-	1804	16	FSM	ENSMUSG00000038172.15	ENSMUST00000048274.11	1804	16	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	23.0820757780192	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAATTCAATTTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	83242476	83158046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUST00000048305.10	chr12	-	4516	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_8	78.1559142917253	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTGGTACCTTATTAA	8811	False	NA	79	True	AATAAA	-13	NA	101049922	101005667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ENSMUST00000048308.6	chr1	-	982	2	FSM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	140	1913	140	-1913	multi-exon	FALSE	canonical	3	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTATCTCCCCCATC	NA	False	NA	-2	True	AATACA	-21	NA	184615275	184606035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_184606625_184614882
ENSMUST00000048319.6	chr12	-	4036	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	24.5928834697229	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	83643996	83593622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ENSMUST00000048359.5	chr8	+	4409	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	14.9330686662985	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	1113	False	NA	NA	False	NA	NA	NA	107409699	107578071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ENSMUST00000048363.10	chr5	-	1333	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	53.4714877294432	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	-4	True	AATAAA	-16	NA	90371860	90362582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
ENSMUST00000048371.15	chr14	+	4818	3	FSM	ENSMUSG00000022010.20	ENSMUST00000048371.15	4818	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1126.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	7364	False	NA	28	True	AATAAA	-18	NA	76653026	76745202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76656450_76742688_76742738_76743856
ENSMUST00000048374.6	chr16	+	3974	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	0	0	0	0	multi-exon	FALSE	canonical	2	173	junction_10	25.4173169315725	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTTTAGATCAGTAC	NA	False	NA	NA	False	AATAAA	-23	NA	48814550	48840068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ENSMUST00000048375.6	chr2	+	4223	11	FSM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_7	13.8115893364956	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGGTGTTTCTTTTC	1609	False	NA	23	True	ATTAAA	-23	NA	32425370	32459768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ENSMUST00000048377.11	chr1	-	5764	24	FSM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	-166	729	-166	-729	multi-exon	FALSE	canonical	3	81	junction_17	25.1317135224534	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	252	False	NA	-2	True	AATAAA	-23	NA	161704417	161644411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ENSMUST00000048393.8	chr15	+	1270	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	16.5	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTTGGCCTGTGTCCT	8030	False	NA	31	True	AATAAA	-23	NA	101182152	101188826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101182427_101184813_101185132_101188148
ENSMUST00000048400.4	chr2	+	4799	8	FSM	ENSMUSG00000033955.14	ENSMUST00000048400.4	4799	8	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	23.1913073088577	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGATTGTGGTGTGTG	NA	False	NA	12	True	AATAAA	-21	NA	84888502	84903392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ENSMUST00000048402.12	chr12	+	2052	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	12.115149999242	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATATTTATTATTGC	NA	False	NA	17	True	NA	NA	NA	98594415	98636074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUST00000048418.14	chr6	-	5360	25	FSM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_1	23.3505516827524	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTGCTCTATGGGAT	NA	False	NA	-1	True	AATAAA	-27	NA	148732965	148672180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ENSMUST00000048421.14	chr5	-	2490	11	FSM	ENSMUSG00000036948.18	ENSMUST00000048421.14	2490	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	7.05761999543756	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTGTCTGTGTGTTGA	9255	False	NA	0	True	ATTAAA	-20	NA	138262256	138257917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328_138261425_138261683
ENSMUST00000048427.9	chr3	+	4052	13	FSM	ENSMUSG00000038354.14	ENSMUST00000048427.9	4052	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	35.4200978730061	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTATTGTTGTGGTTTTTG	271	False	NA	16	True	AATAAA	-16	NA	96577446	96598348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
ENSMUST00000048431.3	chr2	+	2821	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	1829	0	1829	0	multi-exon	FALSE	canonical	3	24	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACACACTCCTCTTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	32342297	32346965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32342962_32344808
ENSMUST00000048486.13	chr3	+	1695	10	FSM	ENSMUSG00000033860.14	ENSMUST00000048486.13	1695	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	1.8324913891634	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGACATTCCGTGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	82915030	82922356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444_82921615_82922141
ENSMUST00000048486.13-0	chr3	+	1558	10	FSM	ENSMUSG00000033860.14	ENSMUST00000048486.13	1695	10	137	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	1.8324913891634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGACATTCCGTGGCTT	NA	False	NA	NA	False	AATAAA	-16	NA	82915167	82922356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444_82921615_82922141
ENSMUST00000048490.13	chr3	+	2497	10	FSM	ENSMUSG00000025762.17	ENSMUST00000048490.13	2497	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATGCTTCAAAATTGTT	NA	False	NA	2	True	AATAAA	-15	NA	40904262	40932217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ENSMUST00000048493.12	chr2	-	4744	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_24	70.0848691865005	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACTGTTTTGTCACA	464	False	NA	-2	True	AATAAA	-20	NA	119618018	119594440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ENSMUST00000048518.16	chr10	-	3594	11	FSM	ENSMUSG00000035365.16	ENSMUST00000048518.16	3594	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	14.3666279968544	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	-11	True	ATTAAA	-13	NA	87982803	87927293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357
ENSMUST00000048519.17	chr12	+	6231	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_14	10.0218960281975	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTGTTTACTTGGCA	NA	False	NA	NA	False	AATAAA	-16	NA	35097184	35197478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ENSMUST00000048519.17-0	chr12	+	4211	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	0	2020	0	72	multi-exon	TRUE	canonical	3	72	junction_14	10.0218960281975	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTGGTGTATACATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	35097184	35195458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ENSMUST00000048544.14	chr13	+	6309	7	FSM	ENSMUSG00000037933.17	ENSMUST00000048544.14	6309	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	11.1616904335021	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACATGCGTGCCCTCTG	1428	False	NA	11	True	AATAAA	-18	NA	49495060	49540495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518
ENSMUST00000048545.10	chr8	-	3197	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTGTGAGGACTCTT	5255	False	NA	NA	False	TATAAA	-16	NA	8740521	8715074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
ENSMUST00000048545.10-0	chr8	-	1696	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	0	1501	0	0	multi-exon	FALSE	canonical	3	754	junction_2	83.8424448328861	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5255	False	NA	-11	True	AATAAA	-35	NA	8740521	8716575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
ENSMUST00000048560.11	chr17	+	2641	11	FSM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	56.7176339421877	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTATTGTGTGGATGGAA	NA	False	NA	13	True	AATAAA	-16	NA	34029493	34041892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUST00000048568.6	chr9	-	1025	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTCCCATACTCCTG	9756	False	NA	NA	False	AATAAA	-17	NA	107863078	107861421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107862264_107862895
ENSMUST00000048578.3	chr11	-	1438	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_5	59.12318513416	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGGGACTATGTTGT	NA	False	NA	-10	True	AATAAA	-12	NA	43638809	43620835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ENSMUST00000048604.8	chr9	+	2291	4	FSM	ENSMUSG00000042138.10	ENSMUST00000048604.8	2291	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	397	False	NA	NA	False	TTTAAA	-7	NA	37400616	37435446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
ENSMUST00000048615.13	chr14	+	1313	6	FSM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	221	1408	0	1110	multi-exon	FALSE	canonical	3	117	junction_1	38.2015706483385	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTTTTCTTTTGTGTGTG	9251	False	NA	-3	True	AATAAA	-9	NA	51181979	51189461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
ENSMUST00000048630.8	chr19	-	2618	15	FSM	ENSMUSG00000042401.9	ENSMUST00000048630.8	2618	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	18.8128538342208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTTCCAGCCTCTTTT	NA	False	NA	1	True	GATAAA	-27	NA	42420222	42271473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
ENSMUST00000048630.8-0	chr19	-	2121	15	FSM	ENSMUSG00000042401.9	ENSMUST00000048630.8	2618	15	0	497	0	0	multi-exon	FALSE	canonical	3	19	junction_14	18.8128538342208	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTTGTGGAAAACTAT	NA	False	NA	-17	True	AATAAA	-17	NA	42420222	42271970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42297495_42297631_42307043_42307201_42312150_42312288_42322314_42322512_42402379_42402583_42420048
ENSMUST00000048635.13	chr2	-	1431	6	FSM	ENSMUSG00000033256.15	ENSMUST00000048635.13	1431	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	51.5945733580577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCGAGCATCCACTCGC	NA	False	NA	-10	True	TATAAA	-39	NA	122197309	122179372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122197164
ENSMUST00000048642.15	chr16	-	1348	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	1528	junction_6	107.954723019524	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121137	20098569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ENSMUST00000048646.9	chr15	+	13757	62	FSM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_44	12.5602231076886	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTGTGCTGTGAGTTT	-26	True	NA	NA	False	AATAAA	-28	NA	35371305	35931375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35834329_35834527_35840020_35840203_35841394_35841745_35846991_35847154_35869432_35869589_35875707_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ENSMUST00000048653.10	chr8	+	2342	16	FSM	ENSMUSG00000034361.11	ENSMUST00000048653.10	2342	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	2.64491125665032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAAGCTCCTTCCTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	95259617	95297159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95259822_95274955_95275174_95277797_95277978_95278367_95278443_95280017_95280090_95281302_95281387_95281557_95281648_95282136_95282236_95282599_95282687_95284047_95284108_95284752_95284887_95286736_95286792_95289365_95289418_95290584_95290719_95295218_95295456_95296598
ENSMUST00000048655.8	chr1	+	2792	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTACGTGCCTGTC	NA	False	NA	NA	False	TATAAA	-24	NA	183766577	183807833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
ENSMUST00000048655.8-0	chr1	+	1983	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	51	758	51	-758	multi-exon	FALSE	canonical	3	8	junction_1	4.08248290463863	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCCAGTTTCCCTTG	NA	False	NA	NA	False	AATAAA	-17	NA	183766628	183807075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
ENSMUST00000048657.10	chr14	+	4461	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	29.806850674089	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724375	20744920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUST00000048670.10	chr9	+	2558	8	FSM	ENSMUSG00000042195.10	ENSMUST00000048670.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	9.10931346681706	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAGAATCACAATGT	NA	False	NA	39	True	ATTAAA	-15	NA	53678821	53725438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724066
ENSMUST00000048675.2	chrX	+	948	1	FSM	ENSMUSG00000033343.2	ENSMUST00000048675.2	948	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCACAGTCTAATGTACT	NA	False	NA	NA	False	NA	NA	NA	71265622	71266570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_71265600_71266600
ENSMUST00000048677.9	chr17	+	3595	13	FSM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_11	15.481844205391	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGGGCTTTGGTTTCCTG	NA	False	NA	11	True	AATAAA	-17	NA	29768758	29825869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ENSMUST00000048678.7	chr10	+	4667	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCAGATTGATTTATTT	NA	False	NA	NA	False	AATACA	-20	NA	76367440	76391313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ENSMUST00000048678.7-0	chr10	+	3117	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	5	1545	0	701	multi-exon	FALSE	canonical	3	170	junction_9	27.7651309078683	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367445	76389768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ENSMUST00000048685.13	chr9	-	1256	7	FSM	ENSMUSG00000042210.18	ENSMUST00000048685.13	1256	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.56165113888	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTTGTGTTTCCTGAC	NA	False	NA	1	True	AATAAA	-28	NA	106324877	106317249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322851_106322969_106323029_106324729
ENSMUST00000048687.11	chrX	+	1019	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	2732	junction_2	36	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAGCCCATCAATTTA	NA	False	NA	8	True	AATAAA	-24	NA	135145827	135147888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135145977_135146449_135146516_135147084
ENSMUST00000048688.8	chr18	-	4254	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_21	37.2590368590547	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681766	62637225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ENSMUST00000048698.14	chr5	-	2304	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_14	100.146932869985	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ENSMUST00000048702.7	chr13	-	2990	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	93328791	93282790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUST00000048702.7-0	chr13	-	1964	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	-102	1128	0	207	multi-exon	FALSE	canonical	3	135	junction_4	92.51905484928	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328893	93283918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUST00000048706.10	chr4	-	2300	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_6	85.9268193438375	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	NA	False	NA	-17	True	CATAAA	-21	NA	34614944	34570795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUST00000048715.9	chr6	-	2009	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACACGGACTGCTTT	9954	False	NA	NA	False	AATAAA	-14	NA	52194485	52191477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52193011_52194009
ENSMUST00000048718.4	chr8	-	1340	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	0	4310	0	0	multi-exon	FALSE	canonical	3	29	junction_6	17.5214154679352	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGAGTTTCCCTGA	NA	False	NA	-6	True	AATAAA	-17	NA	80021566	79994536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
ENSMUST00000048731.6	chr7	-	2277	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.76194411635517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACTGAGGCTTTGAGG	9893	False	NA	NA	False	NA	NA	NA	79585107	79575108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ENSMUST00000048731.6-0	chr7	-	1687	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	81	509	81	-509	multi-exon	FALSE	canonical	3	36	junction_1	5.76194411635517	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTAGTGCTCCATGCTT	9974	False	NA	-7	True	AATAAA	-15	NA	79585026	79575617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ENSMUST00000048774.13	chr6	-	3961	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGTTGTTATTATGTT	NA	False	NA	-1	True	AATAAA	-16	NA	30873674	30747552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUST00000048774.13-0	chr6	-	3128	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	-25	858	0	0	multi-exon	FALSE	canonical	3	177	junction_15	22.2825132553629	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCAAAGTTGCTATACT	NA	False	NA	-14	True	AATAAA	-15	NA	30873699	30748410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUST00000048781.4	chr14	+	3400	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTTAAAGTTTATTT	8891	False	NA	8	True	NA	NA	NA	55777722	55787474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUST00000048781.4-0	chr14	+	2132	10	FSM	ENSMUSG00000040618.8	ENSMUST00000048781.4	3400	10	123	1145	0	0	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	1951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUST00000048788.14	chr16	+	2866	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	9.69455388349562	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCAATGCCATCACCTGA	NA	False	NA	NA	False	NA	NA	NA	44544663	44557647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ENSMUST00000048790.7	chrX	+	5931	4	FSM	ENSMUSG00000033361.14	ENSMUST00000048790.7	5931	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0.471404520791032	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTACCTTGTCCTGGTCG	NA	False	NA	6	True	AATAAA	-17	NA	71006587	71016328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_71006654_71009420_71009459_71010107_71010269_71010662
ENSMUST00000048792.5	chr2	-	680	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCTTCTTTGTGCCCA	NA	False	NA	3	True	ATTAAA	-21	NA	32271950	32269112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32269546_32271703
ENSMUST00000048807.12	chr11	+	3003	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	24	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910436	70918197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70911016_70915375_70915538_70915935
ENSMUST00000048824.9	chr9	+	531	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGTGTGACGGCAGT	2783	False	NA	14	True	NA	NA	NA	48406741	48407272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_48406700_48407300
ENSMUST00000048860.9	chr1	-	2284	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	58.0215477215146	918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTACTGTTTTAATCTC	4222	False	NA	-40	True	AATAAA	-23	NA	72251466	72198600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
ENSMUST00000048892.14	chr4	+	4919	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	16.0370664399696	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTCCTGTATCAG	4535	False	NA	3	True	AATAAA	-18	NA	152381683	152391578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
ENSMUST00000048896.8	chr7	+	2650	11	FSM	ENSMUSG00000042423.10	ENSMUST00000048896.8	2650	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6.82348884369279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCGGCTCCTCTTTGAG	560	False	NA	36	True	TATAAA	-30	NA	127084392	127090685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ENSMUST00000048898.17	chr8	-	2488	14	FSM	ENSMUSG00000039431.17	ENSMUST00000048898.17	2488	14	0	0	0	0	multi-exon	TRUE	canonical	3	263	junction_13	15.5985130530912	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAATGTAATCATTTTAT	NA	False	NA	38	True	AATAAA	-23	NA	41087819	41004141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41004955_41007311_41007439_41008816_41008958_41011196_41011398_41013897_41013948_41015610_41015737_41017000_41017111_41034455_41034589_41040090_41040226_41043452_41043582_41050325_41050484_41059801_41059965_41061936_41062060_41087740
ENSMUST00000048914.8	chr8	+	607	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_1	0	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTACGTATGTATTAACT	8920	False	NA	18	True	AATAAA	-18	NA	71917602	71918391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71917712_71917893
ENSMUST00000048915.11	chr3	+	710	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	7	1891	0	0	multi-exon	FALSE	canonical	3	2531	junction_2	745.762804114016	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUST00000048935.6	chr19	+	2391	2	FSM	ENSMUSG00000042372.6	ENSMUST00000048935.6	2391	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGATGTCTTTTCT	NA	False	NA	17	True	AATAAA	-13	NA	25587900	25601285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_25588632_25599625
ENSMUST00000048937.6	chr9	+	2180	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_2	48.4889013457617	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATGCTTAAGAAAAC	926	False	NA	5	True	AATAAA	-14	NA	75348817	75373714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ENSMUST00000048946.7	chr13	-	804	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_5	10.4115320678563	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTGTCGAATGTCTT	NA	False	NA	-7	True	ATTAAA	-13	NA	49369502	49356426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
ENSMUST00000048957.11	chr5	+	7915	48	FSM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_41	13.2327768430788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTGTGTCATCTCACT	NA	False	NA	NA	False	AATATA	-42	NA	103573366	103746169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ENSMUST00000048962.4	chrX	+	4983	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_20	20.3345386022518	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	18	True	AATAAA	-22	NA	99669342	99770820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ENSMUST00000048966.7	chr15	-	7417	5	FSM	ENSMUSG00000041852.16	ENSMUST00000048966.7	7417	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	57.1505686760858	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACTCTTAAGTGAATGT	NA	False	NA	-5	True	AATAAA	-28	NA	82796335	82692636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82796186
ENSMUST00000048967.9	chr8	-	2117	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	3.34477204006491	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGGTGTGCATTTCTC	NA	False	NA	NA	False	AATAAA	-20	NA	65146088	65045575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
ENSMUST00000048982.11	chr15	-	4085	8	FSM	ENSMUSG00000036158.13	ENSMUST00000048982.11	4085	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.38505138783324	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTCCGAGTCCGCATCT	NA	False	NA	NA	False	AATAAA	-14	NA	93493772	93396994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_93399185_93400840_93401708_93402909_93403097_93406433_93406638_93407108_93407247_93408551_93408666_93410330_93410518_93493574
ENSMUST00000048988.14	chr2	-	7218	14	FSM	ENSMUSG00000039501.15	ENSMUST00000048988.14	7218	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	5.9245752350676	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCATCTCTTATCTGT	960	False	NA	NA	False	AATAAA	-18	NA	166904935	166877712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904429
ENSMUST00000048993.12	chr13	-	3054	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	24.1119836409624	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGATTTGCAGTGAACA	NA	False	NA	-6	True	AATAAA	-18	NA	81859132	81821961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ENSMUST00000048994.7	chr17	-	1447	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	9.89949493661167	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGAGTCTCCTCTGTTT	NA	False	NA	-1	True	NA	NA	NA	35454768	35439150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
ENSMUST00000049004.8	chr7	-	3422	20	FSM	ENSMUSG00000039062.16	ENSMUST00000049004.8	3422	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	3.42388546679802	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCCAGACTTGTCACTC	NA	False	NA	-2	True	AATAAA	-15	NA	79492100	79471551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385
ENSMUST00000049005.15	chr14	-	5956	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACTATTGACATTGGAA	NA	False	NA	-11	True	AATAAA	-22	NA	34224644	34132690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ENSMUST00000049005.15-0	chr14	-	5465	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	159	332	0	-332	multi-exon	FALSE	canonical	3	65	junction_12	20.5622361516338	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224485	34133022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ENSMUST00000049009.7	chr5	-	1631	11	FSM	ENSMUSG00000038569.14	ENSMUST00000049009.7	1631	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	5.37494186015067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGGTCATTTTATA	9992	False	NA	NA	False	AATAAA	-17	NA	122492296	122463570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490606_122490678_122492201
ENSMUST00000049020.9	chr7	+	6083	3	FSM	ENSMUSG00000041037.9	ENSMUST00000049020.9	6083	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTGTCTTCTATTTA	NA	False	NA	15	True	AATAAA	-16	NA	24230113	24238025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24230330_24230808_24231341_24232690
ENSMUST00000049022.15	chr13	+	1187	4	FSM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	21.013223349966	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGTTCCATGTGCCA	NA	False	NA	13	True	AATAAA	-15	NA	49340960	49349720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49341114_49347211_49347441_49348369_49348534_49349079
ENSMUST00000049031.6	chr9	-	8081	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	3.11247489949718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCTCTGTGTGTCAAC	NA	False	NA	2	True	AATAAA	-20	NA	70564456	70506295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ENSMUST00000049032.13	chr2	-	4121	10	FSM	ENSMUSG00000038705.14	ENSMUST00000049032.13	4121	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	10.3171916936948	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTGTCTCTTGTAA	6176	False	NA	-4	True	AATAAA	-16	NA	180929828	180893241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
ENSMUST00000049040.14	chr5	+	1198	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	0	5275	0	369	multi-exon	FALSE	canonical	3	373	junction_1	23.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCTTTGAAGGGAACG	NA	False	NA	29	True	AATAAA	-21	NA	125518631	125532159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_125518957_125528733_125528837_125531389
ENSMUST00000049051.13	chr2	-	2197	8	FSM	ENSMUSG00000036890.14	ENSMUST00000049051.13	2197	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	5.16661180572146	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCATTTGCGTCTAAGT	NA	False	NA	-6	True	AATAAA	-25	NA	44646449	44454426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44525013_44525329_44642058_44642233_44646279
ENSMUST00000049052.4	chr7	-	2806	3	FSM	ENSMUSG00000030823.7	ENSMUST00000049052.4	3878	3	0	1072	0	-56	multi-exon	FALSE	canonical	2	4	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTCCTCATTTGTATT	NA	False	NA	NA	False	CATAAA	-5	NA	126986338	126982503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126984803_126985691_126985806_126985945
ENSMUST00000049055.8	chr13	+	2338	3	FSM	ENSMUSG00000035840.8	ENSMUST00000049055.8	2338	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	38	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACATTACCTCATTTT	455	False	NA	NA	False	AATAAA	-17	NA	81805947	81819303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81806056_81813123_81813389_81817338
ENSMUST00000049055.8-0	chr13	+	4191	3	FSM	ENSMUSG00000035840.8	ENSMUST00000049055.8	2338	3	-166	-1687	0	0	multi-exon	FALSE	canonical	2	14	junction_2	38	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	289	False	NA	27	True	AATAAA	-29	NA	81805781	81820990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81806056_81813123_81813389_81817338
ENSMUST00000049057.5	chr11	-	3118	8	FSM	ENSMUSG00000034685.5	ENSMUST00000049057.5	3118	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.01695886884898	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTCTTTCTCTCTCTC	NA	False	NA	-4	True	AATACA	-18	NA	102338508	102327806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102329736_102330257_102330385_102330485_102330603_102330699_102330880_102330961_102331121_102334475_102334569_102334789_102335018_102338223
ENSMUST00000049060.8	chr5	+	5313	25	FSM	ENSMUSG00000036403.16	ENSMUST00000049060.8	5313	25	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	5.70818126318124	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGGAAGGTCTTGTAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	76739560	76794312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ENSMUST00000049074.13	chr4	-	7656	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	0	0	0	0	multi-exon	TRUE	canonical	3	357	junction_20	50.8611774834205	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGTCTCAGCTCCTG	NA	False	NA	-2	True	AATAAA	-30	NA	118148602	118065409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ENSMUST00000049089.7	chr12	+	1628	2	FSM	ENSMUSG00000035799.7	ENSMUST00000049089.7	1628	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTAAAGTTTGGTCTAT	NA	False	NA	NA	False	AATAAA	-25	NA	34007669	34009828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_34008638_34009168
ENSMUST00000049091.9	chr11	-	2915	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCGTGTGTCCTGTGT	5007	False	NA	-4	True	AATAAA	-14	NA	63970292	63853452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ENSMUST00000049091.9-0	chr11	-	1676	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	0	1239	0	-1239	multi-exon	FALSE	canonical	3	230	junction_1	27.1272720502613	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTCTCCTGGAA	5007	False	NA	NA	False	NA	NA	NA	63970292	63854691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ENSMUST00000049093.8	chr3	+	2795	8	FSM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	94.3746333956929	717	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAATGTTCTTTTCT	NA	False	NA	19	True	AATAAA	-14	NA	96465275	96469173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ENSMUST00000049095.6	chr4	-	3827	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAGAGTGAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	115875123	115853865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ENSMUST00000049095.6-0	chr4	-	2507	15	FSM	ENSMUSG00000034171.14	ENSMUST00000049095.6	3827	15	199	1121	0	403	multi-exon	FALSE	canonical	3	38	junction_1	8.32257809350258	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGCTGGCTGGGATATC	NA	False	NA	NA	False	NA	NA	NA	115874924	115854986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_115855813_115856017_115856164_115856695_115856805_115857245_115857286_115857983_115858025_115858300_115858401_115859654_115859753_115860173_115860300_115861551_115861677_115861910_115861952_115862196_115862404_115862497_115862632_115862783_115862919_115865376_115865491_115874659
ENSMUST00000049124.10	chr6	+	3010	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	3.13687742827162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATATGGTTGATTCT	NA	False	NA	NA	False	NA	NA	NA	124470071	124487602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUST00000049124.10-0	chr6	+	2117	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	0	893	0	-893	multi-exon	TRUE	canonical	2	10	junction_3	3.13687742827162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATATGCCTCCTGTCCC	NA	False	NA	NA	False	NA	NA	NA	124470071	124486709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUST00000049126.13	chr1	-	3632	13	FSM	ENSMUSG00000036766.13	ENSMUST00000049126.13	3632	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	3.60169713082905	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGTCTCATTCTTTAA	NA	False	NA	1	True	AATAAA	-19	NA	84673942	84347559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84673173
ENSMUST00000049130.8	chrX	-	903	3	FSM	ENSMUSG00000042750.8	ENSMUST00000049130.8	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_2	34	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTAGTTCTTTAAAGG	4156	False	NA	0	True	AATAAA	-18	NA	134968985	134967312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_134967957_134968348_134968422_134968799
ENSMUST00000049138.8	chr5	+	5649	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	13.6633634219397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTTACAGTGCCGGG	1639	False	NA	8	True	AATAAA	-18	NA	118383291	118404158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ENSMUST00000049151.4	chr15	-	2840	9	FSM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	4.64858849544676	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAATTGTCTCTATGTTTT	NA	False	NA	-3	True	AATAAA	-27	NA	94441428	94420568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
ENSMUST00000049152.15	chr6	+	2480	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_5	39.9433626804532	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51500880	51567659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUST00000049156.7	chr8	-	3085	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_5	4.74664220738176	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGGTAGCAGGCTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	120505155	120486814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
ENSMUST00000049156.7-0	chr8	-	3003	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	22	60	0	-60	multi-exon	FALSE	canonical	3	25	junction_5	4.74664220738176	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTGGCAAGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	120505133	120486874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
ENSMUST00000049166.5	chr6	-	1516	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	40.3016404408335	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTTCTTGGCAT	NA	False	NA	0	True	ATTAAA	-22	NA	4086972	4076898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
ENSMUST00000049167.14	chr11	+	4410	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	13.672742137224	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTGCCTGTCTGTCC	NA	False	NA	18	True	TATAAA	-22	NA	77873627	77921365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ENSMUST00000049168.9	chr14	-	4268	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	10.1293289898751	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGATCTTTGCTTCCTAC	NA	False	NA	NA	False	AATAAA	-18	NA	75991998	75939809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ENSMUST00000049169.6	chr9	+	4845	20	FSM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_9	35.0166561080031	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56993864	57035650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUST00000049185.6	chr10	-	4522	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCTCTCGTGATTCCT	NA	False	NA	NA	False	NA	NA	NA	76304948	76295400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ENSMUST00000049185.6-0	chr10	-	3849	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	251	422	0	-422	multi-exon	FALSE	canonical	3	28	junction_2	3.63145976158349	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAATAGCCCAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	76304697	76295822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ENSMUST00000049239.8	chr12	-	4452	31	FSM	ENSMUSG00000034761.16	ENSMUST00000049239.8	4452	31	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	26.8295856596159	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATAAAGTATTTGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	69939937	69850532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUST00000049242.9	chr10	+	3216	5	FSM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4.84767985741633	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCTGGTGCTTGGTGTCT	1774	False	NA	3	True	AATAAA	-20	NA	61311579	61418570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826_61383995_61415908
ENSMUST00000049245.10	chr8	-	1695	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235527	79231897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79233493_79235427
ENSMUST00000049246.7	chr6	+	1612	2	FSM	ENSMUSG00000034639.8	ENSMUST00000049246.7	1612	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTCCCGATCTTATTA	NA	False	NA	6	True	AATAAA	-16	NA	108042005	108054083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_108042201_108052666
ENSMUST00000049257.8	chr11	+	3194	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTGTTTTGTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	83832887	83853914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ENSMUST00000049257.8-0	chr11	+	2193	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	103	898	103	-898	multi-exon	FALSE	canonical	3	267	junction_7	30.0713437392763	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTGTGTGTATGGAGA	NA	False	NA	23	True	AATAAA	-24	NA	83832990	83853016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ENSMUST00000049260.7	chr18	-	3637	6	FSM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	0	1286	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.12795348811006	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	21433195	21261543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
ENSMUST00000049262.14	chr2	+	3644	8	FSM	ENSMUSG00000037902.19	ENSMUST00000049262.14	3644	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	35.4193536395697	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129435474	129474148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469918_129471846
ENSMUST00000049263.9	chr9	+	3691	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_6	54.986612006924	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCTAATGTATTGAGA	NA	False	NA	15	True	AATAAA	-16	NA	70450151	70499514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUST00000049271.13	chr12	+	2441	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCGCTGTCTCTGAAA	NA	False	NA	NA	False	TATAAA	-11	NA	113120040	113128164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ENSMUST00000049271.13-0	chr12	+	3345	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	0	-904	0	-600	multi-exon	FALSE	canonical	3	152	junction_3	28.4088230043027	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120040	113129068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ENSMUST00000049281.12	chr18	+	4475	5	FSM	ENSMUSG00000034300.18	ENSMUST00000049281.12	4475	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	15.2868407462104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACGATAGTGTCT	4437	False	NA	26	True	AATAAA	-33	NA	34891958	34906813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34892198_34895547_34895778_34896125_34896184_34901220_34902006_34903650
ENSMUST00000049285.10	chr6	+	3700	2	FSM	ENSMUSG00000034648.10	ENSMUST00000049285.10	3700	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGCAATAATGTATCAT	NA	False	NA	NA	False	AATAAA	-25	NA	107506728	107547175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_107507205_107543951
ENSMUST00000049294.4	chr7	+	467	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	137	816	0	-816	multi-exon	FALSE	canonical	3	3249	junction_1	86	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTTTTCCAGTGGTCT	NA	False	NA	1	True	AATAAA	-19	NA	18883783	18886651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18883820_18885142_18885323_18886400
ENSMUST00000049308.9	chr17	+	8990	58	FSM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	48.4846455023872	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACAGGGTCATACTTCTG	NA	False	NA	16	True	AATAAA	-20	NA	27276277	27341197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ENSMUST00000049312.14	chr14	-	1594	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	212.437441772082	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168313	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
ENSMUST00000049323.9	chr18	+	1619	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_5	28.487814158962	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGTGCCAAGCTGGGA	NA	False	NA	4	True	AATAAA	-19	NA	36893272	36896863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ENSMUST00000049339.7	chr10	+	2095	3	FSM	ENSMUSG00000037171.7	ENSMUST00000049339.7	2095	3	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	2.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61253750	61261117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61254275_61258760_61259477_61260262
ENSMUST00000049343.15	chr7	-	3454	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_26	151.95728923444	2478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTTGTGGTCTTTG	NA	False	NA	-2	True	AATAAA	-21	NA	44198271	44182169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ENSMUST00000049344.15	chr6	-	3661	8	FSM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.61291648072041	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGTGGTAAGTTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	118116101	118084412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
ENSMUST00000049348.9	chr9	+	2706	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_7	39.1366001255571	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTTGGCAGAGTATTT	NA	False	NA	4	True	NA	NA	NA	107828154	107849469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUST00000049348.9-0	chr9	+	1950	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	11	745	0	0	multi-exon	FALSE	canonical	3	256	junction_7	39.1366001255571	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGCTCTGGCTGTATA	NA	False	NA	13	True	AATAAA	-14	NA	107828165	107848724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUST00000049353.9	chr11	+	1860	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	44.8549544883144	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATAAGAATCTGGGAGT	7776	False	NA	28	True	AATAAA	-35	NA	58197997	58205453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ENSMUST00000049355.11	chr9	-	4072	6	FSM	ENSMUSG00000042688.17	ENSMUST00000049355.11	4072	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	19.2727787306346	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACTGCTCAGTCTT	NA	False	NA	-48	True	AATAAA	-16	NA	75317287	75294185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317144
ENSMUST00000049357.10	chr4	-	1648	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGGCTTTTTGTGTGTG	-1	True	NA	2	True	TTTAAA	-38	NA	33248510	33245422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_33246508_33247947
ENSMUST00000049369.16	chr19	-	1992	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	7.26907877057606	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATTTCCTTATGACTT	NA	False	NA	-10	True	AATAAA	-27	NA	47525558	47489471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ENSMUST00000049385.14	chr11	+	1322	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATGTCCAGATTGCAC	3957	False	NA	21	True	AATAAA	-17	NA	100210710	100212922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ENSMUST00000049385.14-0	chr11	+	657	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	102	563	102	0	multi-exon	FALSE	canonical	3	11207	junction_1	646.711854091312	2255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGTAGTCTTGAAGT	4059	False	NA	-1	True	AATAAA	-13	NA	100210812	100212359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ENSMUST00000049388.9	chr18	+	1610	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_3	103.11913282973	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091882	47221062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ENSMUST00000049389.11	chr8	+	3381	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	8.82664841387841	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGTCTCCATCCAGTT	1220	False	NA	2	True	AATAAA	-26	NA	40876855	40938766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ENSMUST00000049393.15	chr5	-	3033	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	40	3397	0	1568	multi-exon	TRUE	canonical	3	14	junction_2	1.4790199457749	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTATCAGTGGGTAC	1751	False	NA	NA	False	ACTAAA	-15	NA	138153966	138141360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
ENSMUST00000049400.15	chr19	+	5637	14	FSM	ENSMUSG00000032702.17	ENSMUST00000049400.15	5637	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	16.8104644783043	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214338	25411860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_25214682_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
ENSMUST00000049411.12	chr14	+	1239	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	194.901898400195	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTTCTTTGTCCCT	179	False	NA	14	True	AATAAA	-15	NA	51162424	51164596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUST00000049424.11	chr19	+	1204	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	0	0	0	0	multi-exon	FALSE	canonical	3	1012	junction_8	78.6635875103596	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGACCTTTTGTGATGG	975	False	NA	28	True	AATAAA	-21	NA	8713202	8717988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ENSMUST00000049449.11	chr1	+	3261	10	FSM	ENSMUSG00000031506.12	ENSMUST00000049449.11	3261	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.40370085030933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACCCAATTCTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	135060462	135073055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135060529_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898
ENSMUST00000049453.9	chr5	+	5048	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	108.11846884684	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGTCAGTTGTGTTCT	NA	False	NA	38	True	ATTAAA	-38	NA	29774239	29881090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ENSMUST00000049454.6	chr7	+	3007	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGACTGGATTTCTGA	NA	False	NA	NA	False	NA	NA	NA	18828518	18832474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18829344_18830156_18830945_18831080
ENSMUST00000049460.12	chr11	+	2331	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	53.84932682959	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	4138	False	NA	15	True	AATAAA	-17	NA	102321147	102327633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUST00000049461.7	chr8	-	1902	15	FSM	ENSMUSG00000056228.11	ENSMUST00000049461.7	1902	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	50.1547096288991	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGAAGATTAACTGT	NA	False	NA	-16	True	AGTAAA	-36	NA	11600783	11563976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ENSMUST00000049469.13	chr5	+	3272	18	FSM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	35.7889816992977	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATAATATTCTTAAG	NA	False	NA	10	True	AATAAA	-20	NA	76677204	76718134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ENSMUST00000049470.11	chr1	-	3149	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	214.632196074673	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289717	134273834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUST00000049474.9	chr5	-	3309	11	FSM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	38	1653	0	-1653	multi-exon	FALSE	canonical	3	339	junction_8	26.290682760248	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGCGTGTGTGCTGCT	NA	False	NA	-34	True	ATTAAA	-11	NA	118293491	118204682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ENSMUST00000049488.9	chr13	+	5366	12	FSM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	5.03377025451168	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGTTTGTTTTCTAT	NA	False	NA	5	True	AATAAA	-15	NA	92747598	92848455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
ENSMUST00000049501.9	chrX	-	4453	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_14	25.8655535317559	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTCTGACTTCTTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	165223700	165173028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ENSMUST00000049501.9-0	chrX	-	3550	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	0	903	0	-903	multi-exon	FALSE	canonical	3	107	junction_14	25.8655535317559	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165223700	165173931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ENSMUST00000049503.10	chr17	+	5052	21	FSM	ENSMUSG00000032624.17	ENSMUST00000049503.10	5052	21	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	95.8126296476618	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAATGTTTCCTTTGCCT	NA	False	NA	10	True	GATAAA	-13	NA	83658410	83787784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUST00000049507.6	chr4	-	3521	12	FSM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	3.44016144153173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTGCTTACCAGG	NA	False	NA	NA	False	AATAAA	-33	NA	106321526	106299525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
ENSMUST00000049507.6-0	chr4	-	3283	12	FSM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	238	0	238	0	multi-exon	FALSE	canonical	1	3	junction_11	3.44016144153173	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGCCTGCTTACCAGG	NA	False	NA	NA	False	AATAAA	-33	NA	106321288	106299525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
ENSMUST00000049527.7	chr11	+	3359	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	0	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_9	119.858458191318	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGAATCAGTTTTTCTTC	NA	False	NA	20	True	AATAAA	-25	NA	109541746	109560482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ENSMUST00000049530.14	chr15	-	2092	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	20.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATGCCTCATGGTCACA	2223	False	NA	-8	True	AATAAA	-16	NA	83135975	83110922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83112796_83114714_83114859_83135900
ENSMUST00000049567.10	chr9	-	3172	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	30.9993548319961	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGGCTCTGAATTAACC	NA	False	NA	0	True	AATAAA	-17	NA	21150367	21141026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUST00000049572.15	chr19	-	2969	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	6.37704215656966	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCGGTGTGGTGTTTGC	5915	False	NA	-2	True	AATAAA	-20	NA	34504874	34469717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
ENSMUST00000049583.8	chr4	-	7192	19	FSM	ENSMUSG00000060862.11	ENSMUST00000049583.8	7192	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	6.28539361054709	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTGTTTCAG	9784	False	NA	2	True	AATAAA	-20	NA	136776006	136707042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716077_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
ENSMUST00000049618.9	chr2	-	3678	28	FSM	ENSMUSG00000038860.16	ENSMUST00000049618.9	3678	28	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_11	18.8407520258577	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGCAACCCTTCTC	5801	False	NA	-10	True	AATAAA	-18	NA	32976378	32876385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886
ENSMUST00000049628.16	chr5	-	371	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	0	0	0	0	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTCTCTTTACTGTTT	5502	False	NA	0	True	AATAAA	-24	NA	108582314	108581109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
ENSMUST00000049628.16-0	chr5	-	318	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	51	2	0	0	multi-exon	FALSE	canonical	3	3979	junction_1	506.673026275877	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTCTCTCTTTACTGT	5553	False	NA	-2	True	AATAAA	-22	NA	108582263	108581111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
ENSMUST00000049630.13	chr5	-	772	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	56	1633	0	0	multi-exon	FALSE	canonical	3	183	junction_2	1.5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTGGCTTTTGAC	NA	False	NA	-18	True	AATACA	-14	NA	139330932	139323576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139324131_139328317_139328430_139330826
ENSMUST00000049642.6	chr17	-	1473	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTTTCTTTTCCCAGG	NA	False	NA	3	True	AATAAA	-24	NA	25069338	25067865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25067900_25069300
ENSMUST00000049644.9	chr6	+	833	4	FSM	ENSMUSG00000046323.9	ENSMUST00000049644.9	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_3	656.420766141826	630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGACTCTTTGTAATTTA	680	False	NA	24	True	AATAAA	-14	NA	122603368	122607231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122603570_122605535_122605769_122606259_122606296_122606868
ENSMUST00000049648.9	chr9	+	687	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	-119	1663	-119	-1642	multi-exon	TRUE	canonical	3	30	junction_1	14.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACTGTTTGCATTTGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	4309713	4330069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_4309935_4316826_4317072_4329848
ENSMUST00000049658.14	chr19	+	4206	24	FSM	ENSMUSG00000024851.15	ENSMUST00000049658.14	4206	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.52323793539946	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGGCCTTCCTGTCTGG	1307	False	NA	NA	False	AATAAA	-14	NA	4149997	4163965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4150214_4151143_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813_4155141_4155229_4155326_4155414_4155523_4156563_4156626_4156711_4156963_4157785_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162747_4162877_4163484
ENSMUST00000049680.10	chr7	+	4721	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	128.705817661829	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79675784	79742497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ENSMUST00000049699.9	chr8	+	3255	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	10	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGGCTGCCATTTTTT	NA	False	NA	-13	True	AATAAA	-17	NA	106627072	106658410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106627173_106639251_106640279_106656282
ENSMUST00000049732.11	chr14	-	311	2	FSM	ENSMUSG00000058351.12	ENSMUST00000049732.11	311	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTTCAGCCATTTT	NA	False	NA	-11	True	AATAAA	-18	NA	30850795	30846461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30846567_30850589
ENSMUST00000049744.4	chr13	+	2672	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTAAACAGTCTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	17869997	17873690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_17870406_17871426
ENSMUST00000049744.4-0	chr13	+	901	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	0	1771	0	78	multi-exon	FALSE	canonical	3	374	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGATTTTTGTGAATA	NA	False	NA	17	True	AATAAA	-18	NA	17869997	17871919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_17870406_17871426
ENSMUST00000049778.7	chr5	-	3644	3	FSM	ENSMUSG00000051034.8	ENSMUST00000049778.7	3929	3	0	285	0	-285	multi-exon	TRUE	canonical	3	10	junction_2	2	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTATACATTTGGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	129747163	129731941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129735450_129737833_129737930_129747123
ENSMUST00000049787.3	chr2	-	3715	5	FSM	ENSMUSG00000043110.3	ENSMUST00000049787.3	3715	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	2.48746859276655	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGATGTATTTTGTAACAA	NA	False	NA	NA	False	AATAAA	-21	NA	132722811	132710224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132712824_132713946_132714079_132719932_132720138_132721154_132721836_132722713
ENSMUST00000049811.8	chr18	-	4554	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	0	0	0	0	multi-exon	FALSE	canonical	1	72	junction_13	46.6927189184781	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877619	53814794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ENSMUST00000049821.4	chr4	-	750	5	FSM	ENSMUSG00000045699.5	ENSMUST00000049821.4	750	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	126.107840755442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGTTTTCTACCATTA	NA	False	NA	-2	True	AATACA	-20	NA	146994047	146976862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_146977116_146978205_146978333_146982168_146982273_146991977_146992072_146993875
ENSMUST00000049822.10	chr3	+	1781	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	4.47213595499958	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTTCTTGTTTTCAC	NA	False	NA	17	True	AATAAA	-27	NA	94217395	94239847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ENSMUST00000049861.11	chr5	-	3335	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	6.20483682299543	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTTATGTGTTGTGT	NA	False	NA	NA	False	GATAAA	-3	NA	143166485	143157940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
ENSMUST00000049863.12	chr2	+	5600	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGCCTTCATA	NA	False	NA	NA	False	NA	NA	NA	153083452	153112167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ENSMUST00000049863.12-0	chr2	+	3416	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	0	2184	0	0	multi-exon	FALSE	canonical	3	95	junction_4	7.06320670013903	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCCACTGAGGAGTGT	NA	False	NA	NA	False	AATAGA	-16	NA	153083452	153109983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ENSMUST00000049887.13	chr5	+	2914	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_5	7.43116560320265	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGTCTGTTATCTACC	5146	False	NA	NA	False	NA	NA	NA	24369960	24389011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ENSMUST00000049887.13-0	chr5	+	1701	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	37	1176	0	0	multi-exon	FALSE	canonical	3	52	junction_5	7.43116560320265	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCAAGGGACTCTTTTGT	5183	False	NA	NA	False	AATAAA	-20	NA	24369997	24387835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ENSMUST00000049896.13	chrX	+	3579	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_9	32.218007387174	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCGCATTTGTGTTATC	NA	False	NA	NA	False	NA	NA	NA	7563369	7576501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ENSMUST00000049908.11	chr8	-	1475	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	0	0	0	0	multi-exon	TRUE	canonical	3	428	junction_1	289.200298236361	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ENSMUST00000049911.16	chr17	-	1138	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_6	1792.78505404301	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	3820	False	NA	NA	False	AATAAA	-14	NA	25493284	25480889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ENSMUST00000049912.15	chr7	-	2200	11	FSM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	60.3088716525189	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19363363	19340141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
ENSMUST00000049920.14	chr2	-	6354	36	FSM	ENSMUSG00000034154.16	ENSMUST00000049920.14	6354	36	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_35	12.9307732931632	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTCTGTGGTCTTT	NA	False	NA	0	True	AATAAA	-26	NA	119308168	119203522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119205063_119207827_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119237296_119237425_119242882_119243109_119248801_119248943_119254085_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380_119257549_119258957_119259044_119261468_119261587_119262408_119262494_119263671_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863_119273074_119274927_119274996_119275941_119276138_119277336_119277541_119278685_119278740_119280483_119280699_119281810_119281932_119284536_119284699_119286865_119286934_119287052_119287223_119288561_119288748_119307859
ENSMUST00000049937.13	chr3	-	2012	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_3	230.9202459725	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAACCCAGGCTTTC	NA	False	NA	-10	True	NA	NA	NA	90416805	90406271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUST00000049948.6	chr19	-	4195	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCTCCTTGTCACAG	NA	False	NA	NA	False	NA	NA	NA	9113000	9087231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ENSMUST00000049948.6-0	chr19	-	1974	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	52	2169	52	-2169	multi-exon	FALSE	canonical	3	393	junction_3	31.0344790336311	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGTTAGGTGTCACT	NA	False	NA	NA	False	AATAAA	-21	NA	9112948	9089400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ENSMUST00000049977.13	chr7	+	2309	12	FSM	ENSMUSG00000030584.15	ENSMUST00000049977.13	2309	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	12.1008161735527	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCATCTCTAACCTC	1789	False	NA	10	True	ATTAAA	-26	NA	29003400	29017013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ENSMUST00000049994.8	chr4	-	4097	5	FSM	ENSMUSG00000048899.9	ENSMUST00000049994.8	4097	5	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_2	4.35889894354067	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCCTATGTCTTGTCT	9973	False	NA	-4	True	AATATA	-24	NA	119349825	119322479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119325723_119327663_119327868_119331715_119331803_119334987_119335219_119349493
ENSMUST00000049999.9	chrX	+	1309	2	FSM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCATCTAAAAAATTGA	NA	False	NA	NA	False	AATAAA	-19	NA	152615288	152617239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_152615545_152616186
ENSMUST00000050000.16	chr2	-	3533	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	0	359	0	0	multi-exon	FALSE	canonical	3	22	junction_3	6.44827472379863	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTGCCTGGGCCCAC	5149	False	NA	-23	True	AATAAA	-15	NA	32737257	32677972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ENSMUST00000050003.9	chr2	-	1672	7	FSM	ENSMUSG00000044320.15	ENSMUST00000050003.9	1672	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	6.6248689714506	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCCAGAGTTTTTCTCTG	NA	False	NA	NA	False	GATAAA	-16	NA	30691719	30685312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30685818_30686156_30686296_30686412_30686579_30687879_30687993_30690735_30690829_30690925_30691014_30691151
ENSMUST00000050004.3	chr18	+	1348	6	FSM	ENSMUSG00000033107.7	ENSMUST00000050004.3	1348	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	22.5335305711289	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTGGGTGTGGTGGCG	5341	False	NA	NA	False	NA	NA	NA	21077681	21116919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_21077815_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ENSMUST00000050029.8	chr12	-	3316	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTATTGTTTTTGACC	8595	False	NA	NA	False	AATATA	-14	NA	73093953	73088600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_73090604_73092640
ENSMUST00000050063.9	chr12	+	1534	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	0	0	0	0	multi-exon	FALSE	canonical	3	1327	junction_1	0	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACTGCCGTTTGTCTTT	NA	False	NA	30	True	AGTAAA	-19	NA	69418923	69420557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69418998_69419097
ENSMUST00000050067.10	chr4	+	4583	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTATATATATGGATGTCTA	NA	False	NA	NA	False	ATTAAA	-19	NA	116852513	116862474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ENSMUST00000050067.10-0	chr4	+	3497	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	0	1086	0	742	multi-exon	FALSE	canonical	3	56	junction_7	8.68964901477614	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTTGGGATCCCTGC	NA	False	NA	16	True	AATAAA	-24	NA	116852513	116861388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ENSMUST00000050073.13	chr3	-	2464	3	FSM	ENSMUSG00000028035.14	ENSMUST00000050073.13	2464	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATTTAGAAATTCTGT	NA	False	NA	NA	False	AATAGA	-6	NA	151899482	151889591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_151891018_151892051_151892621_151899013
ENSMUST00000050077.15	chr6	+	2509	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_1	7.80924932371864	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATCCATAGCCCTTCA	NA	False	NA	NA	False	TATAAA	-25	NA	57679620	57715467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUST00000050083.6	chrX	-	3090	23	FSM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	0	0	0	0	multi-exon	FALSE	non_canonical	3	112	junction_22	288.723912992818	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTTATTTGACTTCT	NA	False	NA	-5	True	GATAAA	-14	NA	37665060	37622450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ENSMUST00000050096.15	chr19	+	4297	14	FSM	ENSMUSG00000025026.16	ENSMUST00000050096.15	4297	14	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_13	57.745923803991	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGTTTTCAATTTA	2483	False	NA	NA	False	GATAAA	-27	NA	53131186	53235639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53233428
ENSMUST00000050101.9	chr13	-	4844	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTCCACTATACTA	9006	False	NA	0	True	AATAAA	-22	NA	23553378	23537272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
ENSMUST00000050101.9-0	chr13	-	2588	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	14	2242	0	1686	multi-exon	FALSE	canonical	3	31	junction_1	41.5772373621272	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTTGTGTATAAGTAGG	9020	False	NA	-13	True	AATAAA	-12	NA	23553364	23539514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
ENSMUST00000050103.2	chr10	+	1540	2	FSM	ENSMUSG00000044312.5	ENSMUST00000050103.2	1540	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGGAAAAAAAAAGAAA	9264	False	NA	NA	False	NA	NA	NA	61968868	61970542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61969107_61969240
ENSMUST00000050104.8	chr6	+	2083	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	5.71547606649408	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTTATTTATTTATTT	NA	False	NA	32	True	AATAAA	-32	NA	135042648	135061707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
ENSMUST00000050129.6	chr5	-	542	3	FSM	ENSMUSG00000049387.11	ENSMUST00000050129.6	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	6	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATAAGTTGTTGAAAAC	NA	False	NA	NA	False	AATAAA	-15	NA	71705548	71600166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_71600613_71660793_71660857_71705515
ENSMUST00000050140.6	chr11	-	840	2	FSM	ENSMUSG00000045377.6	ENSMUST00000050140.6	1582	2	0	742	0	-742	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	69289060	69288086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69288708_69288841
ENSMUST00000050148.5	chr19	+	5179	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGTTATGATTTTGTC	3969	False	NA	11	True	AATAAA	-22	NA	28967899	28997637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ENSMUST00000050148.5-1	chr19	+	2646	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	-133	2666	0	979	multi-exon	FALSE	canonical	3	145	junction_6	22.9449825064702	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCAGTGCTCACTGGCT	3836	False	NA	23	True	AATAAA	-17	NA	28967766	28994971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ENSMUST00000050166.14	chr5	-	8969	30	FSM	ENSMUSG00000040537.18	ENSMUST00000050166.14	8969	30	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_4	8.66814524415925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCTCTCTTTCATGT	6239	False	NA	-3	True	AATAAA	-19	NA	8417982	8122351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8157001_8157020_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
ENSMUST00000050183.7	chr9	+	4428	19	FSM	ENSMUSG00000034485.11	ENSMUST00000050183.7	4428	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	35.7857134056402	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGAGATGAGTGTGT	NA	False	NA	28	True	AATAAA	-29	NA	60701829	60787652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ENSMUST00000050205.12	chr5	+	954	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	49.2461927462418	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140317663	140323892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
ENSMUST00000050207.10	chr11	-	1309	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	2.16024689946929	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80033001	80027503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
ENSMUST00000050211.7	chr8	-	2406	10	FSM	ENSMUSG00000035824.8	ENSMUST00000050211.7	2406	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	11.1055541659718	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCATTCATTCATTCAT	NA	False	NA	6	True	AATAAA	-30	NA	104975190	104953316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ENSMUST00000050214.9	chr17	-	2102	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_6	38.0609912279546	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUST00000050226.7	chr11	-	2624	8	FSM	ENSMUSG00000045667.15	ENSMUST00000050226.7	2624	8	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGAGTGATCATTGT	NA	False	NA	-1	True	GATAAA	-18	NA	72302539	72280939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ENSMUST00000050228.15	chr18	-	2802	13	FSM	ENSMUSG00000049411.16	ENSMUST00000050228.15	2802	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	7.11170787426543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTTTACTGAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	12254525	12114534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12246451_12246530_12251460_12251508_12254437
ENSMUST00000050234.4	chr15	-	3340	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	255	2258	255	-2258	multi-exon	FALSE	canonical	3	23	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCATGATTCTTCA	NA	False	NA	2	True	NA	NA	NA	74581129	74576407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_74579714_74581095
ENSMUST00000050248.9	chr16	+	4920	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	21.3485362495886	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	NA	False	NA	6	True	AATAAA	-27	NA	55794245	55829276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ENSMUST00000050273.9	chr16	+	444	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	2901	junction_2	455	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	False	NA	28	True	ATTAAA	-30	NA	38167352	38173125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38167570_38169602_38169692_38172987
ENSMUST00000050312.3	chr2	-	2930	12	FSM	ENSMUSG00000027223.16	ENSMUST00000050312.3	2930	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_10	15.2158030073021	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATCAGAGTGGGTGTA	NA	False	NA	-10	True	ATTAAA	-14	NA	92231608	92214024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92231373
ENSMUST00000050323.6	chr2	+	1606	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	10.5791477608992	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGATTCTGACCCTT	NA	False	NA	7	True	AATAAA	-15	NA	90865985	90876074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUST00000050328.15	chrX	-	3647	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	0	0	0	0	multi-exon	TRUE	canonical	3	1008	junction_2	64.9970120101527	2252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGCCCATGTGTTT	NA	False	NA	-2	True	AATAAA	-21	NA	93256315	93232312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ENSMUST00000050349.3	chr15	+	2745	2	FSM	ENSMUSG00000049687.6	ENSMUST00000050349.3	2745	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	82225379	82229911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82225473_82227259
ENSMUST00000050383.8	chr7	+	6310	3	FSM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	27	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTGGTGTGGTTATATC	1663	False	NA	20	True	AAAACA	-19	NA	127476872	127485168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127477280_127477741_127483091_127484614
ENSMUST00000050401.6	chr3	+	5733	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACAGTCATTTGCTTT	2879	False	NA	23	True	AATAAA	-11	NA	89738676	89766141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
ENSMUST00000050401.6-0	chr3	+	2525	6	FSM	ENSMUSG00000046280.10	ENSMUST00000050401.6	5733	6	-146	3354	-146	-3354	multi-exon	FALSE	canonical	3	46	junction_4	6.34350061086148	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTTTCTTTGTGGTTT	2733	False	NA	NA	False	NA	NA	NA	89738530	89762787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89739411_89741450_89741578_89756674_89756981_89758915_89759058_89759673_89759794_89761837
ENSMUST00000050410.11	chr2	-	775	5	FSM	ENSMUSG00000044627.12	ENSMUST00000050410.11	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178087	32168827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ENSMUST00000050467.9	chr15	-	4151	2	FSM	ENSMUSG00000048546.9	ENSMUST00000050467.9	4151	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTGCCTACTTGTTTG	NA	False	NA	-8	True	ATTAAA	-17	NA	81742686	81732472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81736074_81742136
ENSMUST00000050472.16	chr5	+	3757	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	75.8798392196504	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121369	149152244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000050476.11	chr18	+	2362	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_3	140.362229804017	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTACAGTTGTCCTG	NA	False	NA	11	True	AATAAA	-29	NA	36812631	36816906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
ENSMUST00000050480.8	chr14	-	2457	16	FSM	ENSMUSG00000046753.11	ENSMUST00000050480.8	2457	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	25.3941375561806	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCTCTTGTC	7541	False	NA	NA	False	AATAAA	-15	NA	27230402	27204368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27228607_27228673_27230378
ENSMUST00000050487.16	chr18	+	1224	8	FSM	ENSMUSG00000024610.16	ENSMUST00000050487.16	1224	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.45108115095397	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTTCTGCCTCTTCA	NA	False	NA	7	True	AATAAA	-17	NA	60936919	60945724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60937083_60940979_60941150_60941303_60941384_60942099_60942163_60943053_60943147_60943399_60943491_60944930_60944994_60945223
ENSMUST00000050497.14	chr6	+	2534	10	FSM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	6.73483664919633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	1453	False	NA	NA	False	AATAAA	-26	NA	86415355	86447370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ENSMUST00000050516.14	chr10	+	1450	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_7	12.5797456254091	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838660	59935808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUST00000050551.10	chrX	-	901	3	FSM	ENSMUSG00000051159.17	ENSMUST00000050551.10	901	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	38	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCTGGGTGTGTTCTT	NA	False	NA	0	True	AATAAA	-20	NA	101295787	101290986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101291615_101292168_101292294_101295639
ENSMUST00000050552.15	chr1	+	3876	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	0	0	0	0	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTACTGTGTCTGTGCTTT	657	False	NA	13	True	NA	NA	NA	58432056	58446512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUST00000050552.15-0	chr1	+	2840	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	234	802	0	-802	multi-exon	FALSE	canonical	3	1694	junction_11	87.7965341283964	1736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTTATAGATCAGTCT	891	False	NA	21	True	AATAAA	-16	NA	58432290	58445710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUST00000050556.11	chr5	-	10540	27	FSM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	28.7549584095699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	42001658	41944880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ENSMUST00000050561.13	chr8	-	5369	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_6	45.5936155374607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAATGTCA	NA	False	NA	NA	False	NA	NA	NA	70495384	70468772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUST00000050561.13-0	chr8	-	4286	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	0	1083	0	-1083	multi-exon	FALSE	canonical	3	161	junction_6	45.5936155374607	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGACAGGTTTTACTG	NA	False	NA	NA	False	NA	NA	NA	70495384	70469855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUST00000050567.11	chr1	-	3641	2	FSM	ENSMUSG00000043629.13	ENSMUST00000050567.11	3641	2	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCAGTCCTCATTT	680	False	NA	-5	True	AATAAA	-14	NA	52992003	52961482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52964894_52991773
ENSMUST00000050574.7	chr11	+	2672	6	FSM	ENSMUSG00000044707.8	ENSMUST00000050574.7	2672	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	2.71293199325011	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGATTGTGTCTCTGTTG	NA	False	NA	NA	False	NA	NA	NA	43419610	43477824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_43419795_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
ENSMUST00000050575.9	chr14	+	2830	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTCTTTATTTCCGTT	NA	False	NA	7	True	AATAAA	-18	NA	55332240	55336443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55333464_55334836
ENSMUST00000050584.10	chr18	+	831	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_1	90	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGACTTACTCCAGGT	NA	False	NA	17	True	AATAAA	-17	NA	36481749	36536033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36481870_36499567_36499795_36535549
ENSMUST00000050595.13	chr11	-	2059	6	FSM	ENSMUSG00000048728.16	ENSMUST00000050595.13	2059	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	5.56417109729742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTTGTTTCTTTTTTT	NA	False	NA	-1	True	ATTAAA	-26	NA	50778270	50763546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50765115_50768869_50768933_50774010_50774104_50774511_50774639_50777195_50777326_50778192
ENSMUST00000050611.14	chr11	-	4804	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGGTGTTGTATCATTT	3055	False	NA	NA	False	ATTAAA	-23	NA	20199418	20177036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ENSMUST00000050611.14-0	chr11	-	5115	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	35	-346	0	346	multi-exon	FALSE	canonical	3	49	junction_3	29.8756682863422	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTAGTTTAATATTT	3090	False	NA	NA	False	AATAAA	-16	NA	20199383	20176690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ENSMUST00000050625.15	chr16	+	4350	22	FSM	ENSMUSG00000052133.17	ENSMUST00000050625.15	4350	22	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_14	8.19767125828774	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTGTGCATATGTGT	NA	False	NA	26	True	ATTAAA	-26	NA	35361940	35484631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ENSMUST00000050630.14	chr17	+	1508	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	13.7774519348892	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGAGTGGCCTGCTTTGTTT	NA	False	NA	26	True	AATAAA	-27	NA	45088038	45430177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
ENSMUST00000050646.13	chr11	+	3410	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCAAATGTCTGTCTTT	NA	False	NA	14	True	NA	NA	NA	62172309	62207252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ENSMUST00000050646.13-0	chr11	+	2241	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	-11	1180	0	0	multi-exon	FALSE	canonical	3	145	junction_2	27.2192742167915	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTATGGATTCTAAT	NA	False	NA	16	True	AATAAA	-12	NA	62172298	62206072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ENSMUST00000050649.6	chr12	-	3150	1	FSM	ENSMUSG00000043398.6	ENSMUST00000050649.6	3150	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGATGTTTTGTTTTGT	NA	False	NA	-5	True	AATACA	-19	NA	72117899	72114749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_72114700_72117900
ENSMUST00000050668.4	chr2	-	4300	2	FSM	ENSMUSG00000040321.4	ENSMUST00000050668.4	4300	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGATTTTGTTTGGTGA	NA	False	NA	-4	True	AATAAA	-25	NA	114031950	114023941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_114028109_114031817
ENSMUST00000050686.10	chr4	-	3456	28	FSM	ENSMUSG00000049488.15	ENSMUST00000050686.10	3456	28	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	5.81280927905584	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTTGCGTTATTGAT	4	True	NA	NA	False	AATAAA	-32	NA	12087957	12039354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
ENSMUST00000050687.14	chr12	+	1643	4	FSM	ENSMUSG00000034271.17	ENSMUST00000050687.14	1643	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	28.5228952870419	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCGAGTGGTGTCTG	6639	False	NA	34	True	AGTAAA	-20	NA	85646189	85686652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85646389_85654906_85655140_85678418_85678524_85685546
ENSMUST00000050705.4	chr16	+	1271	6	FSM	ENSMUSG00000058550.16	ENSMUST00000050705.4	1271	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	211.400094607358	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104149	48114600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_48104205_48108240_48108359_48109401_48109464_48111376_48111678_48113273_48113470_48114061
ENSMUST00000050714.8	chr17	+	2625	2	FSM	ENSMUSG00000046070.10	ENSMUST00000050714.8	2625	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	7775	False	NA	9	True	ATTAAA	-16	NA	25097231	25100984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25097799_25098926
ENSMUST00000050813.4	chr10	-	1567	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTATTCCAAAACATCAT	NA	False	NA	2	True	AATAAA	-23	NA	84963891	84955296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_84956679_84962231_84962351_84963825
ENSMUST00000050827.14	chr5	-	2344	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	200.336700053759	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4346	False	NA	NA	False	AATAAA	-15	NA	123887452	123866488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUST00000050833.14	chr7	-	1944	5	FSM	ENSMUSG00000030689.16	ENSMUST00000050833.14	1944	5	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	87.2969071617088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGCTTGGATTTCT	9569	False	NA	1	True	ATTAAA	-31	NA	126460635	126450751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411
ENSMUST00000050850.14	chr4	+	3194	2	FSM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523222	65534475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_65523307_65531365
ENSMUST00000050867.8	chr10	+	2715	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_2	15.2786615905975	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5469	False	NA	16	True	AATAGA	-15	NA	81156936	81162076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ENSMUST00000050880.8	chr11	+	2695	17	FSM	ENSMUSG00000039908.15	ENSMUST00000050880.8	2695	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	16.3122605346408	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATGTGTGTGTGGTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	119246382	119271905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ENSMUST00000050881.10	chr16	+	1329	3	FSM	ENSMUSG00000022516.11	ENSMUST00000050881.10	1329	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGTTGCTTCTGAGTG	105	False	NA	9	True	AATAAA	-15	NA	4756985	4758880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4757158_4757241_4757578_4758059
ENSMUST00000050884.16	chr16	-	1202	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	0	972	0	644	multi-exon	FALSE	canonical	3	5886	junction_4	404.27841891449	2726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAAATGCCTGATTA	NA	False	NA	-13	True	AATAAA	-17	NA	95928929	95922789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ENSMUST00000050897.7	chr16	+	3067	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	293	1267	0	87	multi-exon	FALSE	canonical	0	0	junction_1	35.5942143737688	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGTGATACTTTTT	6401	False	NA	11	True	AATAAA	-16	NA	44167776	44207593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ENSMUST00000050901.5	chr10	+	1258	2	FSM	ENSMUSG00000047631.5	ENSMUST00000050901.5	1258	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGTATTTATCATTCA	473	False	NA	NA	False	ATTAAA	-16	NA	128104539	128106022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128104639_128104863
ENSMUST00000050909.7	chr3	+	5030	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTGTGGTTGGTTTAT	536	False	NA	18	True	ATTAAA	-25	NA	108093650	108099092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108093995_108094406
ENSMUST00000050916.7	chr9	-	4571	2	FSM	ENSMUSG00000032733.7	ENSMUST00000050916.7	4571	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGCACAGCTTCTTCTT	NA	False	NA	NA	False	GATAAA	-24	NA	56835655	56824476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_56825989_56832596
ENSMUST00000050918.4	chr4	+	4444	2	FSM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGTATTGGGTGAGCAT	5744	False	NA	NA	False	AATAAA	-14	NA	138181624	138187434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138182663_138184028
ENSMUST00000050918.4-0	chr4	+	1475	2	FSM	ENSMUSG00000046447.4	ENSMUST00000050918.4	4444	2	0	2969	0	-2969	multi-exon	FALSE	canonical	3	239	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTTGCAGCTATTTG	5744	False	NA	NA	False	TATAAA	-9	NA	138181624	138184465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138182663_138184028
ENSMUST00000050949.9	chr4	+	3318	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	8.00780868902348	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTAAGGGTTCTTCTTTTC	NA	False	NA	24	True	AATAAA	-15	NA	138700215	138786478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUST00000050970.4	chr5	+	682	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	514	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGAGTGGTTTCTCTTC	NA	False	NA	22	True	NA	NA	NA	147014373	147015896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147014504_147015344
ENSMUST00000050990.10	chr12	+	3345	27	FSM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	9.27784470482579	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCAGCACCATACTGC	NA	False	NA	NA	False	NA	NA	NA	21161954	21318180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ENSMUST00000050990.10-0	chr12	+	5535	27	FSM	ENSMUSG00000052632.17	ENSMUST00000050990.10	3345	27	-198	-1992	0	0	multi-exon	FALSE	canonical	3	55	junction_4	9.27784470482579	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTTCATCTGTAAAGTA	NA	False	NA	20	True	AATAAA	-16	NA	21161756	21320172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ENSMUST00000050997.2	chr13	-	1575	4	FSM	ENSMUSG00000043190.15	ENSMUST00000050997.2	2807	4	0	1232	0	0	multi-exon	FALSE	canonical	3	34	junction_3	20.2703943940144	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	-9	True	NA	NA	NA	76166681	76150885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76165639
ENSMUST00000051011.14	chr10	-	2335	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	8.20060973342836	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGAGATGCGCCTCTA	5737	False	NA	-7	True	AATAAA	-18	NA	128640239	128635904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
ENSMUST00000051025.5	chr11	-	1933	2	FSM	ENSMUSG00000089876.4	ENSMUST00000051025.5	1933	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGAATGGAAAGTGTTT	NA	False	NA	-6	True	ATTAAA	-12	NA	69696450	69694428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69695757_69695845
ENSMUST00000051039.5	chr9	-	3682	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCTCTGTCTCCTCA	6418	False	NA	-4	True	AATAAA	-18	NA	59657932	59641541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_59645152_59657860
ENSMUST00000051043.4	chr4	-	913	3	FSM	ENSMUSG00000046133.4	ENSMUST00000051043.4	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	115.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	-2	True	ATTAAA	-26	NA	101750986	101747216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_101747741_101747885_101748198_101750909
ENSMUST00000051053.5	chr11	+	1012	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	5	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTACAATTTCTAATTT	4481	False	NA	NA	False	AATAAA	-29	NA	32405369	32466687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32405547_32449224_32449462_32466089
ENSMUST00000051064.9	chr3	+	3292	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_7	36.9256008752735	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCTTTTTTTTCTTGG	NA	False	NA	10	True	NA	NA	NA	7568542	7618896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ENSMUST00000051094.9	chr8	-	1792	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_5	234.329170185873	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	-19	True	AATAAA	-1	NA	23747090	23731361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ENSMUST00000051097.6	chr9	+	1456	5	FSM	ENSMUSG00000048752.8	ENSMUST00000051097.6	1456	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	2.54950975679639	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTCCTTTCTGAGCC	NA	False	NA	NA	False	ATTAAA	-16	NA	110687034	110693697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110687528_110690327_110690491_110691329_110691614_110692797_110692965_110693348
ENSMUST00000051118.7	chr16	-	3315	7	FSM	ENSMUSG00000050908.13	ENSMUST00000051118.7	3315	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	2.91070819942883	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTCTCATAGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	10265226	10238420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793
ENSMUST00000051139.13	chr3	+	4762	8	FSM	ENSMUSG00000044098.15	ENSMUST00000051139.13	4762	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	18.1411697753019	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTACTGATGTTTCAAA	NA	False	NA	18	True	AATAAA	-15	NA	103821435	103873929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
ENSMUST00000051145.15	chr3	+	4222	15	FSM	ENSMUSG00000040389.16	ENSMUST00000051145.15	4222	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	8.19064922297845	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	3	True	AATAAA	-18	NA	108498594	108553035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530638_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUST00000051169.13	chr7	+	5424	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	22.9037463577953	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTAATTACTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	133239271	133274700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ENSMUST00000051179.12	chr7	+	2002	1	FSM	ENSMUSG00000051515.12	ENSMUST00000051179.12	2002	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTTGTTTTTGGCGC	NA	False	NA	NA	False	NA	NA	NA	92729072	92731074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_92729100_92731100
ENSMUST00000051207.2	chr11	-	3059	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCTGTCATTCCTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	3864664	3857021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3857985_3862568
ENSMUST00000051207.2-0	chr11	-	2235	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	825	-1	825	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTGTCATTCCTTGGG	63	False	NA	NA	False	AATAAA	-17	NA	3863839	3857020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3857985_3862568
ENSMUST00000051209.11	chr7	-	8694	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	8.98262211161084	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTCTCTTCCTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	6733420	6706890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
ENSMUST00000051226.8	chr15	+	2879	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5577830991277	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTTGGGCGCTCTT	1596	False	NA	1	True	AATAAA	-13	NA	98006346	98030322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUST00000051234.9	chr19	-	1101	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	0	732	0	0	multi-exon	FALSE	canonical	3	390	junction_8	253.325599525591	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5822	False	NA	-6	True	AGTAAA	-15	NA	46327099	46318982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ENSMUST00000051241.7	chr7	-	1792	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	998	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAAATTTGTCTTTTTC	6671	False	NA	-2	True	AATAAA	-18	NA	28078680	28076208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28077919_28078598
ENSMUST00000051256.10	chrX	+	2253	4	FSM	ENSMUSG00000033460.15	ENSMUST00000051256.10	2253	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	53.7463177033243	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618718	133622666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133618800_133619668_133619858_133620375_133620475_133620782
ENSMUST00000051293.8	chr5	+	1480	2	FSM	ENSMUSG00000044197.9	ENSMUST00000051293.8	4157	2	72	2605	72	1047	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATACTTCATATTGA	1427	False	NA	NA	False	AATGAA	-20	NA	139366407	139379565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139366499_139378176
ENSMUST00000051301.6	chr18	+	5957	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGTTTTCATTTCTTG	NA	False	NA	NA	False	AATAAA	-26	NA	36414149	36425588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36414603_36420084
ENSMUST00000051301.6-0	chr18	+	2373	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	0	3584	0	-3584	multi-exon	FALSE	canonical	3	21	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATTTGCTAAGTTGTGA	NA	False	NA	0	True	ATTAAA	-14	NA	36414149	36422004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36414603_36420084
ENSMUST00000051310.13	chr14	-	3419	12	FSM	ENSMUSG00000037697.20	ENSMUST00000051310.13	5012	12	45	1548	0	0	multi-exon	FALSE	canonical	3	14	junction_1	31.1368613098913	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTTCAATTATTTTTT	NA	False	NA	60	True	ATTAAA	-18	NA	45895555	45832178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ENSMUST00000051341.6	chr15	+	1754	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTCTCCTGTACCCA	NA	False	NA	27	True	AATAAA	-23	NA	102187888	102190189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102188065_102188611
ENSMUST00000051363.8	chr15	+	2968	1	FSM	ENSMUSG00000047347.8	ENSMUST00000051363.8	2968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1519	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAAAAAATAATTAATTG	NA	False	NA	NA	False	AATAAA	-11	NA	82400511	82403479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82400500_82403500
ENSMUST00000051364.4	chr7	-	763	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTGCTGTGTGTGTGT	2944	False	NA	-9	True	AATAAA	-19	NA	19307268	19298873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19299602_19307233
ENSMUST00000051377.15	chr7	-	4273	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	55	3678	0	1882	multi-exon	FALSE	canonical	3	11	junction_12	3.52591814502721	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATTTAAATAGTT	NA	False	NA	NA	False	AATAAA	-11	NA	35453824	35388267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ENSMUST00000051379.14	chr8	-	3964	10	FSM	ENSMUSG00000045636.17	ENSMUST00000051379.14	3964	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	37.6133677314165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCAGTTATTTTTGAA	NA	False	NA	NA	False	ATTAAA	-20	NA	41494903	41444088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41494509
ENSMUST00000051386.13	chr9	+	2909	20	FSM	ENSMUSG00000038775.15	ENSMUST00000051386.13	2909	20	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	8.09945109456443	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGATTTATCTTGTGAT	4707	False	NA	NA	False	NA	NA	NA	118881845	118900587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_118881897_118886850_118886923_118887072_118887148_118887378_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899345_118899418_118899624_118899883_118900201
ENSMUST00000051390.9	chr7	-	2171	3	FSM	ENSMUSG00000049600.9	ENSMUST00000051390.9	2171	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	65	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATTTTAGGATTCCAA	NA	False	NA	-45	True	NA	NA	NA	12743757	12739637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12740308_12740950_12742257_12743562
ENSMUST00000051395.9	chr11	-	3824	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCAGAGTTCATGTTG	NA	False	NA	-13	True	ATTAAA	-16	NA	86999534	86979978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ENSMUST00000051395.9-0	chr11	-	3623	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	-70	271	-70	-271	multi-exon	FALSE	canonical	3	68	junction_6	5.79484658240235	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATAAAGCTGCTATTG	NA	False	NA	NA	False	NA	NA	NA	86999604	86980249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ENSMUST00000051396.13	chr1	-	2925	15	FSM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_13	9.39387555587063	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACATGTACTCATATGT	9226	False	NA	-6	True	AATAAA	-20	NA	156294374	156257362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250
ENSMUST00000051401.4	chr5	-	1816	1	FSM	ENSMUSG00000047501.4	ENSMUST00000051401.4	1816	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	937	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTGTTCTCTATCTGTG	NA	False	NA	-9	True	AATAAA	-25	NA	134975788	134973972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134974000_134975800
ENSMUST00000051430.7	chr8	-	2447	3	FSM	ENSMUSG00000001672.15	ENSMUST00000051430.7	2447	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTTGCCTTGGATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	110688835	110679542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_110681374_110686344_110686473_110688347
ENSMUST00000051431.10	chr1	-	4925	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTTCATTCTTTCGA	NA	False	NA	-3	True	AATAAA	-17	NA	182169183	182140666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ENSMUST00000051431.10-0	chr1	-	2464	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	0	2461	0	-375	multi-exon	FALSE	canonical	3	148	junction_1	16.5604951616792	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTGCTTTGGACTTT	NA	False	NA	-15	True	ACTAAA	-24	NA	182169183	182143127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ENSMUST00000051435.8	chr7	+	2725	4	FSM	ENSMUSG00000034538.9	ENSMUST00000051435.8	2725	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	9.89949493661167	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAATCAAGAGTTTCTA	2969	False	NA	NA	False	AATAAA	-29	NA	7174328	7186561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_7174558_7175135_7175175_7177553_7177681_7184231
ENSMUST00000051454.4	chr2	+	5614	8	FSM	ENSMUSG00000048388.4	ENSMUST00000051454.4	5614	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	1.35526185435788	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTAGTGTTTAATTTC	NA	False	NA	3	True	AATAAA	-16	NA	83642979	83713830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83643322_83683713_83683948_83685780_83685874_83688561_83688718_83690750_83690922_83707014_83707132_83708499_83708624_83709453
ENSMUST00000051477.13	chr4	-	2108	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	0	0	0	0	multi-exon	FALSE	canonical	3	1589	junction_5	116.347067002138	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAAGGTTATTTTCCTC	NA	False	NA	-1	True	ATTAAA	-24	NA	137085031	137047006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUST00000051484.5	chrX	-	1410	1	FSM	ENSMUSG00000047238.5	ENSMUST00000051484.5	1410	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTCATTTATTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	151820571	151819161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151819200_151820600
ENSMUST00000051493.8	chr11	-	1753	2	FSM	ENSMUSG00000043648.8	ENSMUST00000051493.8	1753	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCATGTCTACCTTA	NA	False	NA	-13	True	AATAAA	-16	NA	59678471	59674722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59676052_59678047
ENSMUST00000051558.10	chr4	+	10216	38	FSM	ENSMUSG00000041235.13	ENSMUST00000051558.10	10216	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.7870306351923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATAGAATGCAGTGTAC	23	True	NA	16	True	AATAAA	-26	NA	8691364	8867659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_8691435_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ENSMUST00000051569.7	chrX	-	2785	1	FSM	ENSMUSG00000050424.10	ENSMUST00000051569.7	2785	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTGAGTTCCTGAGCC	NA	False	NA	NA	False	NA	NA	NA	72080709	72077924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72077900_72080700
ENSMUST00000051574.13	chr17	-	1996	13	FSM	ENSMUSG00000023942.16	ENSMUST00000051574.13	1996	13	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_12	699.864927444337	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906498	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ENSMUST00000051589.9	chr9	-	2843	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGGGCTTGACATGT	1	True	NA	NA	False	AATAAA	-45	NA	4309467	4294792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ENSMUST00000051589.9-0	chr9	-	1042	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	-4	1805	0	-1633	multi-exon	FALSE	canonical	3	643	junction_4	99.1576522513517	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTATTTAACAAAACA	-3	True	NA	NA	False	AATAAA	-16	NA	4309471	4296597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ENSMUST00000051594.12	chr13	+	2563	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	8.78009111570034	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTTTTTCTTCTT	2847	False	NA	39	True	NA	NA	NA	108452865	108526119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
ENSMUST00000051605.9	chr2	+	1950	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	0	0	0	0	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTATATGTTTTAAGG	NA	False	NA	117	True	ATTAAA	-18	NA	125089401	125100528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUST00000051605.9-0	chr2	+	855	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	235	860	-183	0	multi-exon	FALSE	canonical	3	2160	junction_3	102.069780052668	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTGGAGAACATGGAGG	NA	False	NA	32	True	AATAAA	-33	NA	125089636	125099668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUST00000051620.5	chr11	-	3503	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	-83	-2667	-83	980	multi-exon	FALSE	canonical	3	23	junction_3	12.1197726417986	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCATCTGCAATAACT	NA	False	NA	-16	True	NA	NA	NA	69286242	69281770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
ENSMUST00000051633.3	chr4	-	2992	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529228	148518951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148521100_148528384
ENSMUST00000051667.14	chr9	+	2010	4	FSM	ENSMUSG00000057895.12	ENSMUST00000051667.14	2010	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	7.71722460186015	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGTTTTAACTGTAT	4874	False	NA	11	True	AATAAA	-22	NA	122752136	122760093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122752284_122754072_122754362_122755374_122755520_122758664
ENSMUST00000051671.11	chr6	-	1511	5	FSM	ENSMUSG00000029922.16	ENSMUST00000051671.11	1511	5	0	0	0	0	multi-exon	FALSE	canonical	3	1568	junction_2	1258.9473777724	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGTCTGTGTGAAATG	NA	False	NA	-5	True	AATAAA	-16	NA	39397292	39377693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUST00000051672.9	chr8	-	792	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	21.2176223927187	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGCTTCTAAGTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	71990100	71986898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
ENSMUST00000051674.3	chr4	-	3505	4	FSM	ENSMUSG00000050966.10	ENSMUST00000051674.3	3505	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	2.62466929133727	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCTGATGCTTAGGAC	8250	False	NA	9	True	AATAAA	-30	NA	133746152	133730640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133733633_133735221_133735407_133745363_133745561_133746021
ENSMUST00000051676.7	chr4	+	2287	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAACTGTATCTTTCTCCT	NA	False	NA	13	True	AATAAA	-17	NA	133207442	133215249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_133207875_133213394
ENSMUST00000051711.16	chr19	-	2867	19	FSM	ENSMUSG00000024969.16	ENSMUST00000051711.16	2867	19	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	106.764148164697	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	4132	False	NA	NA	False	AAGAAA	-13	NA	7318953	7254123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318663_7318824
ENSMUST00000051720.6	chr18	+	4536	17	FSM	ENSMUSG00000045629.9	ENSMUST00000051720.6	4536	17	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_11	4.02336923485777	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACCCTTTTGTCACCT	NA	False	NA	NA	False	ATTAAA	-18	NA	62086145	62148786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_62086239_62094014_62094114_62101059_62101188_62104012_62104119_62106357_62106502_62107519_62107719_62108639_62108714_62110947_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
ENSMUST00000051737.8	chr3	-	2662	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_8	26.3288791357173	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTGCATCATGGCTT	NA	False	NA	-16	True	AATAAA	-16	NA	127631160	127600660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ENSMUST00000051758.11	chr5	+	3112	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_1	60.5	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970810	130013587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129971207_130007359_130007470_130010981
ENSMUST00000051758.11-0	chr5	+	4972	3	FSM	ENSMUSG00000066735.9	ENSMUST00000051758.11	3112	3	86	-1946	-53	0	multi-exon	FALSE	canonical	3	775	junction_1	60.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970896	130015533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129971207_130007359_130007470_130010981
ENSMUST00000051772.10	chr19	-	1800	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	0	0	0	0	multi-exon	FALSE	canonical	2	63	junction_4	19.0574788468989	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4140	False	NA	-3	True	AATAAA	-21	NA	42074796	42063380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
ENSMUST00000051777.15	chr7	+	7803	33	FSM	ENSMUSG00000047248.21	ENSMUST00000051777.15	7803	33	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_15	6.6496446098645	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTACAAGTGTTTT	NA	False	NA	20	True	AATAAA	-14	NA	100021439	100119357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044508_100044961_100045052_100048874_100049023_100055164_100055314_100056068_100056279_100056923_100057037_100059538_100059658_100062532_100062656_100065255_100065748_100067650_100067803_100068857_100069105_100071721_100071903_100073946_100074131_100075183_100075357_100076379_100076504_100079256_100079526_100079943_100080034_100081177_100081781_100084964_100085304_100089379_100089519_100090238_100090304_100092563_100092770_100093513_100093648_100097918_100098081_100100775_100100997_100103809_100104699_100108983_100109096_100118585
ENSMUST00000051784.10	chr13	+	2421	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	41.7053154086303	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	68730366	68740457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ENSMUST00000051803.8	chr19	-	1924	10	FSM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	3.58322566591047	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACAGGTGTCTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	3979808	3963490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
ENSMUST00000051822.13	chr9	-	1187	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_10	209.060852385137	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5423	False	NA	-3	True	AATAAA	-19	NA	54641801	54624442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ENSMUST00000051867.7-1	chr8	-	1992	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	0	115	0	-115	multi-exon	FALSE	canonical	3	383	junction_3	374.138417641861	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTAGTCTCCTCGTGGTCT	NA	False	NA	-5	True	NA	NA	NA	79547769	79533194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ENSMUST00000051870.8	chr8	+	4013	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTACTTAATTT	NA	False	NA	17	True	ATTAAA	-19	NA	13919640	13931639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13919812_13927797
ENSMUST00000051888.4	chr11	+	1862	1	FSM	ENSMUSG00000045176.4	ENSMUST00000051888.4	1862	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGCCTGTTTTTTTGT	NA	False	NA	17	True	ATTAAA	-17	NA	68950542	68952404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68950500_68952400
ENSMUST00000051906.13	chrX	-	6003	7	FSM	ENSMUSG00000059708.13	ENSMUST00000051906.13	6003	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	20.573040611441	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGATGTCTCTAT	NA	False	NA	NA	False	AATAAA	-16	NA	35909048	35871966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35887220_35887990_35900125_35900228_35908702
ENSMUST00000051925.5	chr1	-	959	6	FSM	ENSMUSG00000026701.16	ENSMUST00000051925.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	839.164012574419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGATCGCTCGCTATACTA	NA	False	NA	-54	True	NA	NA	NA	161078736	161069167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161076928_161077040_161078591
ENSMUST00000051934.7	chr12	+	2720	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	9.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGCATAAAGCAGTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	105651642	105669282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105651718_105664976_105665236_105666896
ENSMUST00000051934.7-0	chr12	+	1620	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	0	1100	0	-1100	multi-exon	FALSE	canonical	3	113	junction_2	9.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTTTCCAGTATGTG	NA	False	NA	11	True	AATAAA	-15	NA	105651642	105668182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105651718_105664976_105665236_105666896
ENSMUST00000051937.9	chr5	+	1812	4	FSM	ENSMUSG00000049907.9	ENSMUST00000051937.9	1812	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1.4142135623731	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGACTGGGTCTTTATT	NA	False	NA	21	True	AATAAA	-23	NA	74355946	74360142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_74356252_74356763_74356821_74357927_74358005_74358769
ENSMUST00000051950.14	chr5	+	4472	25	FSM	ENSMUSG00000042605.17	ENSMUST00000051950.14	4472	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	70.6657699432099	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	642	False	NA	4	True	TTTAAA	-7	NA	121849671	121953013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUST00000051955.9	chr13	+	503	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	207	227	-52	0	multi-exon	FALSE	canonical	3	13520	junction_1	3048.72640075601	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATATTTTGTGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	91071283	91072842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ENSMUST00000051995.14	chr8	+	4019	25	FSM	ENSMUSG00000031805.18	ENSMUST00000051995.14	4019	25	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_24	33.9656689418399	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72128939	72143219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
ENSMUST00000052011.15	chr19	-	4545	20	FSM	ENSMUSG00000024642.18	ENSMUST00000052011.15	4545	20	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_14	23.8865044942308	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATTATTTTCTAATT	NA	False	NA	-16	True	ATTAAA	-15	NA	14575415	14425513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
ENSMUST00000052012.14	chrX	-	6115	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_24	10.1886502418132	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGGTGTTACTGCACA	NA	False	NA	NA	False	AATAAA	-16	NA	101687852	101557580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ENSMUST00000052012.14-0	chrX	-	4725	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	0	1390	0	-1390	multi-exon	FALSE	canonical	3	40	junction_24	10.1886502418132	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGAAGTTTAAGAATTT	NA	False	NA	-15	True	ATTAAA	-13	NA	101687852	101558970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ENSMUST00000052027.8	chr4	+	1452	3	FSM	ENSMUSG00000070890.4	ENSMUST00000052027.8	1452	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGATGCTGGGAAATGA	NA	False	NA	NA	False	NA	NA	NA	101797603	101800380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_101797891_101798317_101798903_101799800
ENSMUST00000052068.11	chr9	+	742	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	1910	0	1910	0	multi-exon	FALSE	canonical	3	98	junction_1	8.01387685344754	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACCTTCACTTGTTTT	4795	False	NA	41	True	AATAAA	-42	NA	98306923	98328628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
ENSMUST00000052069.12	chr15	-	3798	12	FSM	ENSMUSG00000037280.13	ENSMUST00000052069.12	3798	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	26.1268362081583	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGATGTTGGATTTGAG	9875	False	NA	-9	True	AATAAA	-17	NA	100627257	100589695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100627183
ENSMUST00000052089.9	chr16	-	3072	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	18.4451137763426	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGGGATGAATTAAT	NA	False	NA	-1	True	AATAAA	-27	NA	97763809	97750960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
ENSMUST00000052107.5	chr2	+	2708	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTGTTTTTTGAGACG	3063	False	NA	22	True	AATAAA	-22	NA	164647017	164664050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164647352_164661676
ENSMUST00000052113.12	chr6	+	2046	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	6.64093674238255	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGACTGATCAAAAAGT	15	False	NA	NA	False	NA	NA	NA	17694030	17942965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
ENSMUST00000052120.14	chr3	-	3432	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_13	50.4098586206493	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069723	100045495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ENSMUST00000052125.7	chr2	+	3399	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	5.5	426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGTTTGAAATTACA	NA	False	NA	NA	False	AATAAA	-22	NA	167922923	167943123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167923280_167929261_167929485_167940303
ENSMUST00000052126.6	chr14	-	408	3	FSM	ENSMUSG00000043681.6	ENSMUST00000052126.6	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	2248	junction_2	168.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGAGTTTACCTCTGTT	NA	False	NA	-6	True	AATAAA	-21	NA	34077390	34073837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_34074035_34075654_34075718_34077242
ENSMUST00000052135.14	chr7	+	6184	18	FSM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_15	18.9192419579373	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTGCAAATGTATATTA	7566	False	NA	15	True	AATAAA	-21	NA	122569786	122601780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
ENSMUST00000052138.11	chr8	+	3560	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTGTCTTAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	112738029	112747160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112738775_112741968_112742094_112744470
ENSMUST00000052138.11-0	chr8	+	2227	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	4	1329	0	-1329	multi-exon	FALSE	canonical	3	135	junction_1	1.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCATTTTCTTTGATT	NA	False	NA	NA	False	AATAAA	-25	NA	112738033	112745831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112738775_112741968_112742094_112744470
ENSMUST00000052140.3	chr11	-	2810	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGAGATTTGGCTTAT	NA	False	NA	-7	True	AATAAA	-17	NA	73029120	73026310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_73026300_73029100
ENSMUST00000052167.9	chr17	+	1295	2	FSM	ENSMUSG00000092417.4	ENSMUST00000052167.9	1295	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGGTTTGTTTACT	6058	False	NA	6	True	AATAAA	-6	NA	35341927	35343782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35342636_35343195
ENSMUST00000052168.6	chr2	+	2832	1	FSM	ENSMUSG00000043415.6	ENSMUST00000052168.6	2832	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTCTGGGTAGAGTGGT	2500	False	NA	4	True	AATAAA	-15	NA	19662562	19665394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_19662600_19665400
ENSMUST00000052172.7	chr1	-	1805	2	FSM	ENSMUSG00000045382.7	ENSMUST00000052172.7	1805	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTGTGCTATGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	128520027	128515935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_128517639_128519925
ENSMUST00000052183.7	chr4	+	2345	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	6.84754619472471	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGAGGGTATTACTTTT	NA	False	NA	14	True	AATAAA	-20	NA	124960464	124967835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
ENSMUST00000052201.9	chr12	-	4017	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_12	54.2140181439599	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219354	65179507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ENSMUST00000052204.6	chr7	-	1898	5	FSM	ENSMUSG00000047037.6	ENSMUST00000052204.6	3183	5	368	917	368	-917	multi-exon	FALSE	canonical	3	26	junction_2	3.34477204006491	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGGTTGTTACATTAG	NA	False	NA	NA	False	AATAAA	-14	NA	55669334	55628231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_55629652_55635151_55635313_55646181_55646273_55647263_55647312_55669156
ENSMUST00000052209.9	chr8	+	2883	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	43.0748186299142	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3746	False	NA	82	True	ATTAAA	-22	NA	105897305	105944621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ENSMUST00000052236.13	chr4	-	4635	11	FSM	ENSMUSG00000048232.13	ENSMUST00000052236.13	4635	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	5.25737577123797	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTCTGGGGTCATAATT	NA	False	NA	0	True	AATAAA	-20	NA	45084604	45034246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45084489
ENSMUST00000052248.8	chr19	+	1864	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	5201	junction_1	1272.81743475733	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTTTTCTGTCATAGC	843	False	NA	NA	False	AAGAAA	-37	NA	8944404	8955843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUST00000052249.7	chr13	+	1849	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_10	37.2860563750043	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481293	99552070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUST00000052266.15	chr6	+	4824	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_11	15.4671210608191	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGTATGTTGTTTTTCTC	NA	False	NA	20	True	ATTAAA	-22	NA	33226019	33950914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ENSMUST00000052281.6	chr11	-	2314	1	FSM	ENSMUSG00000043439.6	ENSMUST00000052281.6	2314	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1748	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTCGAGGTCCTTGC	4941	False	NA	-13	True	AATAAA	-21	NA	97520528	97518214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97518200_97520500
ENSMUST00000052283.7	chrX	-	1854	4	FSM	ENSMUSG00000046942.18	ENSMUST00000052283.7	1854	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	116.448367194316	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78715041	78666836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_78668390_78671446_78671527_78685326_78685395_78714888
ENSMUST00000052286.16-1	chr14	-	882	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	156	517	156	381	multi-exon	TRUE	canonical	3	143	junction_3	28.7170100579198	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATGCATTTCCAGTT	NA	False	NA	NA	False	NA	NA	NA	25903368	25888446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
ENSMUST00000052325.7	chr16	-	923	6	FSM	ENSMUSG00000005732.15	ENSMUST00000052325.7	923	6	0	0	0	0	multi-exon	FALSE	canonical	1	140	junction_5	4913.40247079353	2032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTGAAAACCTGGACC	7798	False	NA	-19	True	AATAAA	-4	NA	18065931	18057665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18065890
ENSMUST00000052332.15	chr1	+	5768	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_7	24.0559244262198	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	15	True	AATAAA	-17	NA	60448777	60520317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ENSMUST00000052342.9	chr3	-	4815	34	FSM	ENSMUSG00000033767.15	ENSMUST00000052342.9	4815	34	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	19.6407122008744	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	False	NA	-26	True	AATAAA	-14	NA	83947482	83805515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820693_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ENSMUST00000052346.10	chr11	+	4303	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_21	57.9955428735457	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCACACATGTGGACA	NA	False	NA	39	True	AATAAA	-24	NA	60590548	60605012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ENSMUST00000052348.12	chr7	+	1525	11	FSM	ENSMUSG00000000154.17	ENSMUST00000052348.12	1525	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.44131112314674	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGGCTTTGCCTAG	856	False	NA	NA	False	AATAAA	-25	NA	143027472	143053071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_143027575_143029806_143030043_143033021_143033120_143033456_143033618_143034126_143034260_143044548_143044662_143045482_143045591_143046578_143046680_143050687_143050790_143051046_143051168_143052821
ENSMUST00000052355.15	chr10	+	1267	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	64.7921653547559	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTTCCTATTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	87982853	88014252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUST00000052368.9	chrX	+	5935	29	FSM	ENSMUSG00000037369.18	ENSMUST00000052368.9	5935	29	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_28	44.1203710643637	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGACTCATCATTTTTT	NA	False	NA	NA	False	AATACA	-17	NA	18028813	18146175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
ENSMUST00000052374.13	chr15	-	3033	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_15	51.7762708412089	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614204	81588453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ENSMUST00000052396.7	chr18	+	2769	6	FSM	ENSMUSG00000024317.16	ENSMUST00000052396.7	2769	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	108.138799697426	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTTAATTAAAA	NA	False	NA	3	True	ATTAAA	-15	NA	21135047	21161281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ENSMUST00000052404.13	chr1	-	6442	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	8.61674322983393	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTTTATGAGCTGT	NA	False	NA	-11	True	AATAAA	-13	NA	119576666	119472766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ENSMUST00000052420.7	chr4	+	3205	3	FSM	ENSMUSG00000045071.15	ENSMUST00000052420.7	3205	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	48.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTCATTTTTACTGTGG	21	True	NA	NA	False	AATAAA	-11	NA	59626242	59721401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59626492_59690143_59691339_59719640
ENSMUST00000052440.8	chr17	-	685	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCAGCCCTGCCCAGTGT	NA	False	NA	NA	False	NA	NA	NA	17566402	17565717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_17565700_17566400
ENSMUST00000052449.6	chr16	+	6455	19	FSM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	22.3737197026631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	False	NA	17	True	AATAAA	-17	NA	4867931	4904149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4868646_4871591_4871706_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ENSMUST00000052455.4	chr1	+	7554	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTCATTTCCCTCAT	5450	False	NA	NA	False	AAGAAA	-40	NA	172204112	172211666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_172204100_172211700
ENSMUST00000052457.15	chr8	+	4717	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCTTCCTCCTGGC	NA	False	NA	7	True	AATAAA	-17	NA	111448107	111468032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ENSMUST00000052457.15-0	chr8	+	3252	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	0	1465	0	0	multi-exon	FALSE	canonical	3	80	junction_11	11.3147544665827	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAAAGAACTATGTGGG	NA	False	NA	13	True	AATAAA	-14	NA	111448107	111466567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ENSMUST00000052458.3	chr4	+	2324	2	FSM	ENSMUSG00000028584.4	ENSMUST00000052458.3	2324	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCTGTAGTCTATTGGTA	NA	False	NA	NA	False	AATAAA	-20	NA	143076326	143097602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_143077382_143096333
ENSMUST00000052499.9	chr15	-	838	4	FSM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_3	66.5181679443043	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAAGTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-25	NA	80148516	80144815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_80145332_80145497_80145596_80148183_80148319_80148427
ENSMUST00000052505.10	chr16	-	3391	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGGTTTTTTGGGTTT	NA	False	NA	NA	False	NA	NA	NA	8455576	8451092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_8454257_8455349
ENSMUST00000052505.10-0	chr16	-	2743	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	0	648	0	-648	multi-exon	FALSE	canonical	3	58	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTGGGTTAGTTCTT	NA	False	NA	NA	False	AATACA	-16	NA	8455576	8451740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_8454257_8455349
ENSMUST00000052509.6	chr7	+	1484	3	FSM	ENSMUSG00000054716.5	ENSMUST00000052509.6	1484	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	20	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACGATGCCTGTAAGTGA	NA	False	NA	31	True	AATAAA	-16	NA	126843445	126853975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126843781_126844156_126844307_126852976
ENSMUST00000052514.6-1	chr13	+	2261	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	0	6649	0	-6643	multi-exon	TRUE	canonical	3	26	junction_2	7.31122983038101	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTTTCCATGGCAT	NA	False	NA	12	True	AGTAAA	-18	NA	112797299	112868634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ENSMUST00000052529.4	chr1	+	5594	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGACTTTATGTAT	5567	False	NA	15	True	AATAAA	-20	NA	133058880	133067521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_133061354_133064400
ENSMUST00000052539.13	chr3	-	3316	10	FSM	ENSMUSG00000041263.15	ENSMUST00000052539.13	3316	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	13.9292746170798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	False	NA	-5	True	AATAAA	-13	NA	89000618	88991287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88998444_88999869_89000573
ENSMUST00000052556.5	chr19	+	2259	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	15.3260852434302	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCTGTGCTTGTGTGC	NA	False	NA	12	True	AGTAAA	-15	NA	21630888	21663001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
ENSMUST00000052566.8	chr11	-	1347	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_5	35.6561355169065	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1631	False	NA	-29	True	AATAAA	-21	NA	78402998	78397880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
ENSMUST00000052580.10	chr8	-	2824	7	FSM	ENSMUSG00000050751.15	ENSMUST00000052580.10	2824	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	10.4083299973307	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGTATGTGATTTTG	NA	False	NA	-2	True	AATAAA	-25	NA	125160675	125095787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125160537
ENSMUST00000052588.5	chr16	-	4741	2	FSM	ENSMUSG00000047141.6	ENSMUST00000052588.5	4741	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCAAGTGTTCAGTTT	NA	False	NA	-7	True	AATAAA	-16	NA	64606684	64600713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_64603640_64604869
ENSMUST00000052590.8	chr5	-	1123	2	FSM	ENSMUSG00000029616.10	ENSMUST00000052590.8	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	3222	False	NA	-41	True	AATAAA	-14	NA	121590559	121582818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121583636_121590253
ENSMUST00000052602.6	chr4	-	5187	7	FSM	ENSMUSG00000050390.13	ENSMUST00000052602.6	5187	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	42.0713679359253	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129142236	129113370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
ENSMUST00000052629.13	chr1	+	4133	21	FSM	ENSMUSG00000037995.16	ENSMUST00000052629.13	4133	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	2.95127091267474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCACCTCTCTTTGT	NA	False	NA	4	True	AATAAA	-16	NA	172309781	172326444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_172309828_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
ENSMUST00000052631.8	chr2	+	1621	3	FSM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCAGTGTTGGGGTGGG	4755	False	NA	NA	False	AATAAA	-24	NA	167380114	167384734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167380292_167380590_167381119_167383818
ENSMUST00000052648.9	chr10	-	2255	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGGAAAGAGCCAACTCC	NA	False	NA	NA	False	NA	NA	NA	18110726	18092531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUST00000052648.9-0	chr10	-	873	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	0	1382	0	-1382	multi-exon	FALSE	canonical	3	18	junction_1	22.796655456448	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGGGAGCTAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	18110726	18093913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUST00000052678.9	chr14	-	9100	46	FSM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_16	125.273027256567	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651816	14518184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ENSMUST00000052686.4	chr9	+	1384	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2061	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTAATGTTGAATGCT	5253	False	NA	34	True	ATTAAA	-30	NA	44245990	44247374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44246000_44247400
ENSMUST00000052691.9	chr17	+	2506	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTGCTGTTACTTTA	NA	False	NA	9	True	AATAAA	-17	NA	15163445	15166198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15163582_15163828
ENSMUST00000052691.9-0	chr17	+	1510	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	46	950	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTTTAAGGTCATCG	NA	False	NA	8	True	AATAAA	-13	NA	15163491	15165248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15163582_15163828
ENSMUST00000052708.7	chr2	-	3137	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_2	30.0416377715996	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139132	129110129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
ENSMUST00000052712.6	chr4	+	4327	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	0	0	0	0	multi-exon	FALSE	canonical	2	97	junction_11	33.5186515241887	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTGTTTTATTTTT	-18	True	NA	11	True	NA	NA	NA	3574874	3616619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ENSMUST00000052715.10	chr4	-	2341	2	FSM	ENSMUSG00000045268.14	ENSMUST00000052715.10	2341	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACTTATTTGGGGA	NA	False	NA	2	True	AGTAAA	-19	NA	119031053	119026709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119028240_119030242
ENSMUST00000052716.8	chr13	+	3482	4	FSM	ENSMUSG00000057396.8	ENSMUST00000052716.8	3482	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGCATTTTATGTG	NA	False	NA	NA	False	AATAAA	-22	NA	67276291	67289851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67276379_67284781_67284909_67285373_67285470_67286679
ENSMUST00000052725.15	chr9	-	4787	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATTGTGTGGACCTGT	NA	False	NA	-1	True	NA	NA	NA	42175552	42162890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ENSMUST00000052725.15-0	chr9	-	2243	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	2544	0	594	multi-exon	FALSE	canonical	3	174	junction_5	23.9198662203617	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATCCACTTAAATGTTA	NA	False	NA	-12	True	AATAAA	-17	NA	42175552	42165434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ENSMUST00000052727.5	chr6	+	1219	3	FSM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTATTGTTTTT	NA	False	NA	19	True	AGTAAA	-22	NA	124785868	124787582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124785994_124786189_124786933_124787231
ENSMUST00000052740.14	chr9	+	3049	11	FSM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGTTCCAGGATTTCCA	NA	False	NA	22	True	AATAAA	-22	NA	122634603	122665399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUST00000052747.4	chr13	-	2294	1	FSM	ENSMUSG00000044231.4	ENSMUST00000052747.4	2294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTGGAAACGTGTCTT	NA	False	NA	-1	True	AATAAA	-18	NA	47168326	47166032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_47166000_47168300
ENSMUST00000052761.9	chrX	-	1331	13	FSM	ENSMUSG00000002010.18	ENSMUST00000052761.9	1331	13	0	0	0	0	multi-exon	TRUE	canonical	2	205	junction_10	445.162891535222	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830380
ENSMUST00000052774.8	chr3	-	4490	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	5.35163526410386	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAAGCCTTAAAAGCAC	NA	False	NA	91	True	NA	NA	NA	154302732	154282067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ENSMUST00000052798.14	chr10	+	2000	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	0	0	0	0	multi-exon	FALSE	canonical	3	2953	junction_7	394.34461257812	3292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGTGTCACCTTGTTT	846	False	NA	39	True	AATAAA	-40	NA	127894822	127913141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUST00000052825.7	chr5	+	1037	1	FSM	ENSMUSG00000051502.8	ENSMUST00000052825.7	1037	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCCCAGCCTGTGTTT	1544	False	NA	7	True	NA	NA	NA	137292890	137293927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137292900_137293900
ENSMUST00000052832.6	chr17	-	755	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTAGCTTGGATAGGAA	NA	False	NA	-32	True	TTTAAA	-27	NA	56916771	56914451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ENSMUST00000052832.6-1	chr17	-	643	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	-56	168	-56	0	multi-exon	FALSE	canonical	3	1891	junction_3	98.6610358753647	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCGGTTTTCTGGTGGG	NA	False	NA	-25	True	AATAAA	-18	NA	56916827	56914619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ENSMUST00000052838.11	chr18	+	10231	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	10.1237344888139	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATATTTTATCATTG	0	True	NA	NA	False	AATAAA	-18	NA	10725547	10818578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ENSMUST00000052839.7	chrX	+	3258	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	5.76085931090146	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAATT	NA	False	NA	52	True	NA	NA	NA	98179735	98192597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
ENSMUST00000052865.16	chr9	+	2907	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	14.5086181285469	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTAGTGTTTTGTTGAA	NA	False	NA	16	True	AATAAA	-19	NA	7764041	7794334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
ENSMUST00000052876.3	chr4	+	958	3	FSM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	731	0	-57	0	multi-exon	FALSE	canonical	3	53	junction_1	143	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	7073	False	NA	20	True	AATGAA	-15	NA	126042267	126043667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126042425_126042676_126042839_126043028
ENSMUST00000052882.5	chr12	-	636	1	FSM	ENSMUSG00000043483.5	ENSMUST00000052882.5	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTATTTGACAGCGAAGA	NA	False	NA	NA	False	AAAACA	-42	NA	96889832	96889196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_96889200_96889800
ENSMUST00000052885.14	chr10	-	2225	11	FSM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	19.7891384350103	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTAGTTCCTCAGCTC	NA	False	NA	-17	True	AATAAA	-18	NA	79820164	79812951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ENSMUST00000052902.9	chr10	+	613	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAACTGTATATGGGACT	NA	False	NA	NA	False	GATAAA	-17	NA	11484966	11485579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_11485000_11485600
ENSMUST00000052910.6	chr15	-	1537	1	FSM	ENSMUSG00000047565.6	ENSMUST00000052910.6	1537	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTCACAAATTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	20666836	20665299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_20665300_20666800
ENSMUST00000052915.14	chr11	+	4260	11	FSM	ENSMUSG00000000142.16	ENSMUST00000052915.14	4260	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	12.1720992437624	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108811174	108841609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_108811388_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
ENSMUST00000052919.8	chr11	-	2184	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	8.33999733546454	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGCTTCCTG	1323	False	NA	1	True	AATAAA	-23	NA	98478194	98472081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
ENSMUST00000052932.10	chr14	-	2387	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	275	5063	275	-5063	multi-exon	FALSE	canonical	3	278	junction_2	18	522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTATAGCTTCTTCGT	NA	False	NA	-9	True	ATTAAA	-14	NA	26390763	26386175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_26387123_26387532_26387612_26389402
ENSMUST00000052939.4	chr16	-	1291	2	FSM	ENSMUSG00000051146.4	ENSMUST00000052939.4	1291	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTGCTGCTTCAGT	NA	False	NA	0	True	AATAAA	-25	NA	20440037	20437964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20438994_20439775
ENSMUST00000052965.8	chr15	-	9423	47	FSM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_43	23.7522658356028	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTGTTTCCATTTGAA	NA	False	NA	0	True	AATAAA	-22	NA	8473947	8320100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ENSMUST00000052999.13	chr4	+	1307	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	0	0	0	0	multi-exon	TRUE	canonical	3	713	junction_3	43.9463758530471	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022633	108036505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUST00000053015.7	chr6	-	1830	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3836	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTATTTGAAAGCTGGG	NA	False	NA	-32	True	ATTAAA	-22	NA	86503303	86501473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86501500_86503300
ENSMUST00000053024.8	chr17	+	2627	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1130	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCCTCTAATTT	NA	False	NA	25	True	ATTAAA	-22	NA	24689365	24692084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24690124_24690215
ENSMUST00000053024.8-0	chr17	+	1065	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	43	1519	0	-1271	multi-exon	FALSE	canonical	3	1130	junction_1	0	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAGAAAAAGAA	NA	False	NA	-15	True	NA	NA	NA	24689408	24690565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24690124_24690215
ENSMUST00000053033.14	chr1	-	2715	3	FSM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	78	37585	78	0	multi-exon	FALSE	canonical	3	49	junction_2	5.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCGTGGTGTTTTA	NA	False	NA	-1	True	AATAAA	-18	NA	97589721	97571627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_97574087_97582324_97582415_97589555
ENSMUST00000053042.6	chr4	-	2784	4	FSM	ENSMUSG00000048485.13	ENSMUST00000053042.6	3288	4	0	504	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.09120616516523	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTTGCTTGTATTTTG	739	False	NA	0	True	ATTAAA	-15	NA	129334611	129320061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129321621_129322220_129322400_129326103_129327105_129334566
ENSMUST00000053078.5	chr8	+	3542	1	FSM	ENSMUSG00000050930.6	ENSMUST00000053078.5	3542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTTTGGTGTTTATTTT	NA	False	NA	2	True	AATAAA	-15	NA	126396556	126400098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_126396600_126400100
ENSMUST00000053079.13	chr11	-	2470	17	FSM	ENSMUSG00000009073.17	ENSMUST00000053079.13	2470	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	88.5606915835124	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTCCCATTTTTGT	9016	False	NA	NA	False	NA	NA	NA	4799365	4722333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4722639_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ENSMUST00000053087.4	chr2	+	4617	4	FSM	ENSMUSG00000042155.4	ENSMUST00000053087.4	4617	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.78423336480244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGGTCTTTTT	5472	False	NA	NA	False	TATAAA	-41	NA	69652713	69666995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69652987_69654130_69655345_69659189_69659343_69664018
ENSMUST00000053094.8	chr6	+	2734	18	FSM	ENSMUSG00000038022.12	ENSMUST00000053094.8	4270	18	0	1536	0	371	multi-exon	TRUE	canonical	1	1	junction_8	4.83570915636814	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTGGTTCATTGGTG	NA	False	NA	NA	False	CATAAA	-36	NA	55180367	55295671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55255031_55255096_55256069_55256136_55261730_55261799_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
ENSMUST00000053098.6	chr2	-	4535	2	FSM	ENSMUSG00000066798.4	ENSMUST00000053098.6	4535	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGCTTGTGTATTTCT	NA	False	NA	2	True	AATAAA	-21	NA	37320931	37315511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37319936_37320820
ENSMUST00000053109.5	chr7	+	2956	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	0	1917	0	443	multi-exon	FALSE	canonical	3	58	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCAGCCTGGCGTGTGTG	9337	False	NA	27	True	TATAAA	-20	NA	18853783	18872180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18853862_18869302
ENSMUST00000053116.7	chr5	-	1684	2	FSM	ENSMUSG00000051022.8	ENSMUST00000053116.7	1684	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATGTTGCTCCTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	39801977	39771281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_39772748_39801759
ENSMUST00000053150.8	chr9	-	374	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTATCCCTTGGCCAGG	7274	False	NA	NA	False	NA	NA	NA	114811807	114811433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114811400_114811800
ENSMUST00000053157.7	chr4	-	593	3	FSM	ENSMUSG00000059816.6	ENSMUST00000053157.7	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	6	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATCATTACTTCTGGAA	NA	False	NA	-11	True	AATAAA	-6	NA	108240546	108224973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108225239_108234543_108234684_108240358
ENSMUST00000053183.12	chr15	-	4566	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_3	18.4712614620659	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTTTCCTTTTCCTCCA	1799	False	NA	NA	False	NA	NA	NA	98661092	98634514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ENSMUST00000053183.12-0	chr15	-	3516	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	58	992	58	-992	multi-exon	FALSE	canonical	3	612	junction_3	18.4712614620659	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGCGCAGCCCTTTGT	1857	False	NA	-11	True	ATTAAA	-14	NA	98661034	98635506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ENSMUST00000053218.7	chr17	-	3250	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	0.816496580927726	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATCTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	14424356	14415313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
ENSMUST00000053230.7	chr9	+	2826	16	FSM	ENSMUSG00000032308.10	ENSMUST00000053230.7	2826	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	6.816320284598	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATTTCTTCTTGCCTTGG	NA	False	NA	33	True	ATTAAA	-17	NA	57496734	57503516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225
ENSMUST00000053232.8	chr15	+	1720	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	0	1540	0	0	multi-exon	FALSE	canonical	3	41	junction_1	28.8124972885031	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGTGAAGAGTGTTA	NA	False	NA	19	True	AATAAA	-13	NA	73620222	73629075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ENSMUST00000053251.12	chr8	-	2466	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGTCTGACAACTT	NA	False	NA	NA	False	AATAAA	-19	NA	34419891	34272670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUST00000053251.12-0	chr8	-	1023	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	22	1421	0	0	multi-exon	FALSE	canonical	3	696	junction_1	308.820996959833	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTAAGAAATGTGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	34419869	34274091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUST00000053252.9	chr8	-	1212	2	FSM	ENSMUSG00000048644.9	ENSMUST00000053252.9	1212	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTGAGTTAACCAGTC	NA	False	NA	-16	True	AATAAA	-34	NA	4309274	4307659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4308648_4309050
ENSMUST00000053263.9	chr4	-	1671	6	FSM	ENSMUSG00000043085.15	ENSMUST00000053263.9	1671	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	22.4535075210979	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	-4	True	AATAAA	-16	NA	141345549	141341543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141342018_141342255_141342447_141343514_141343933_141344605_141344781_141344950_141345024_141345209
ENSMUST00000053265.8	chr13	-	1021	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	0	1065	0	-1065	multi-exon	FALSE	canonical	3	325	junction_1	9.5	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCATTTATTTCCTGA	NA	False	NA	NA	False	AATAAA	-13	NA	36301509	36163442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_36163891_36276788_36276910_36301057
ENSMUST00000053266.11	chr1	-	3031	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	0	0	0	0	multi-exon	FALSE	canonical	3	2257	junction_11	181.480370839383	5176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTGTGTATGTGTG	NA	False	NA	-12	True	AATACA	-9	NA	20890536	20873191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ENSMUST00000053286.9	chr9	-	1195	11	FSM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	530	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	11.2853887837327	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGATTGAACCTGTAAA	8940	False	NA	0	True	AATAAA	-21	NA	44329336	44321455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ENSMUST00000053287.6	chr5	-	5151	18	FSM	ENSMUSG00000051306.8	ENSMUST00000053287.6	5151	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	13.3323240679149	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGTCTCAGTTTTACTC	NA	False	NA	NA	False	ATTAAA	-1	NA	143718035	143696079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143697098_143697704_143697744_143699290_143699593_143700356_143701836_143702331_143702427_143702528_143703237_143703678_143703833_143705248_143705350_143705481_143705623_143706031_143706144_143706902_143706986_143707387_143707459_143708041_143708110_143708863_143708967_143709649_143709761_143712243_143712445_143713534_143713782_143717917
ENSMUST00000053288.6	chr11	+	3700	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	7.49583217528247	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAAGTGACCCTGGGTCT	NA	False	NA	12	True	AATAAA	-22	NA	115272741	115286958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
ENSMUST00000053336.8	chr16	-	5164	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACTGCCGTTGGGGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	21513415	21467794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21472509_21512965
ENSMUST00000053361.12	chr11	+	3667	5	FSM	ENSMUSG00000051043.17	ENSMUST00000053361.12	3667	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.21110255092798	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTGTTTCTAAGTGA	928	False	NA	NA	False	ATTAAA	-38	NA	114742667	114763443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_114742713_114754292_114755373_114757450_114757546_114759321_114759472_114761146
ENSMUST00000053364.12	chr1	+	9867	28	FSM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_14	22.9621266275417	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTGTGTGTGGTTT	NA	False	NA	15	True	NA	NA	NA	139382512	139421829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ENSMUST00000053386.6	chr6	-	800	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	0	2773	0	-2773	multi-exon	FALSE	canonical	3	182	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGATCTGTTTGTCTTA	NA	False	NA	NA	False	TATAAA	-15	NA	57669063	57666333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_57666864_57668793
ENSMUST00000053392.11	chr7	-	3621	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	4.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGCTCCTTCTGGAA	4357	False	NA	NA	False	ATTAAA	-14	NA	127048330	127041307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127044310_127047534_127047649_127047825
ENSMUST00000053392.11-0	chr7	-	2002	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	0	1619	0	0	multi-exon	FALSE	canonical	3	47	junction_1	4.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTTGTCTTAAAATAATA	4357	False	NA	-3	True	ATTAAA	-12	NA	127048330	127042926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127044310_127047534_127047649_127047825
ENSMUST00000053407.13	chr9	+	3603	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	15.6162661540793	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATTAAAAATA	-8	True	NA	NA	False	NA	NA	NA	3335477	3386929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ENSMUST00000053410.11	chr7	+	3145	2	FSM	ENSMUSG00000045252.12	ENSMUST00000053410.11	3145	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTTGTCAGGCCTAG	5034	False	NA	22	True	AATAAA	-18	NA	24776708	24781905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24776908_24778959
ENSMUST00000053426.15	chr5	+	4644	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	9.11262859991561	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCACTCCTTTGGTTTG	NA	False	NA	24	True	AATAAA	-37	NA	122422427	122462344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ENSMUST00000053429.11	chr17	+	2612	2	FSM	ENSMUSG00000051390.11	ENSMUST00000053429.11	2612	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCCCAACACCCCT	NA	False	NA	11	True	ATTAAA	-20	NA	34135144	34138299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34135248_34135790
ENSMUST00000053434.15	chr17	+	3198	10	FSM	ENSMUSG00000024457.17	ENSMUST00000053434.15	3198	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	42.9366458349457	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAAATTTCAAGACAGT	NA	False	NA	13	True	AATAAA	-20	NA	37148037	37170272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ENSMUST00000053456.11	chrX	-	2122	11	FSM	ENSMUSG00000050379.16	ENSMUST00000053456.11	4673	11	165	2386	0	-801	multi-exon	FALSE	canonical	2	7	junction_2	18.537529500988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253144	36179484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUST00000053484.8	chr10	+	7749	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	7.28037269173854	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATGACTATGATTGGTT	2779	False	NA	14	True	ATTAAA	-26	NA	95776611	95881380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ENSMUST00000053498.13	chr5	-	4474	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_14	28.015550927119	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6130	False	NA	-1	True	AATAAA	-16	NA	143098749	142976647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ENSMUST00000053506.8	chr19	-	5602	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.75832409459323	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTATTTTGTGTGTG	5073	False	NA	NA	False	ATTAAA	-18	NA	4956656	4936905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ENSMUST00000053521.15	chr7	-	3150	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	19.4084388862165	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTTCTCTTCTGTCAC	NA	False	NA	0	True	AATATA	-16	NA	29605529	29593140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
ENSMUST00000053536.5	chr11	-	3008	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTCTGACTCTTC	7363	False	NA	-2	True	ATTAAA	-15	NA	113642707	113617677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113620492_113642513
ENSMUST00000053540.11	chrX	+	930	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	4289	junction_2	392	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAATTCAACAGTATT	NA	False	NA	NA	False	AATAAA	-32	NA	135171009	135172727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135171151_135171558_135171632_135172011
ENSMUST00000053558.10	chr8	-	927	5	FSM	ENSMUSG00000050914.17	ENSMUST00000053558.10	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	16.393596310755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGCATTCTTTACTA	NA	False	NA	NA	False	ATTAAA	-22	NA	46452904	46449938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452653
ENSMUST00000053583.7	chr9	+	1838	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGACTCTGGTGGTCTG	NA	False	NA	8	True	NA	NA	NA	21867050	21869560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21867301_21867972
ENSMUST00000053594.7	chr10	-	1661	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	28.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCGTGTCCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	95159970	95010607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95011841_95158447_95158752_95159846
ENSMUST00000053597.3	chr19	-	3194	2	FSM	ENSMUSG00000045045.8	ENSMUST00000053597.3	3194	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCAGTGTTGGTTTTT	NA	False	NA	-7	True	AATAAA	-11	NA	4665530	4661819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4662667_4663183
ENSMUST00000053640.5	chr18	-	2144	1	FSM	ENSMUSG00000045730.5	ENSMUST00000053640.5	2144	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTGCACCCGTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	62313030	62310886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_62310900_62313000
ENSMUST00000053663.11	chr18	+	4455	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACAAAGTTTGTCCTG	8964	False	NA	NA	False	NA	NA	NA	32970277	33000647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUST00000053663.11-0	chr18	+	2800	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	86	1569	0	-375	multi-exon	FALSE	canonical	3	587	junction_7	67.2070318044693	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAGCTATGTGCCAA	9050	False	NA	5	True	AATAAA	-16	NA	32970363	32999078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUST00000053664.9	chr2	-	1977	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_2	94.3986336808766	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	5291	False	NA	-8	True	AATAAA	-16	NA	84508400	84501660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ENSMUST00000053666.8	chr2	+	6060	25	FSM	ENSMUSG00000027130.16	ENSMUST00000053666.8	6060	25	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	14.1194679432336	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATAAGTTGTGCTGTAGT	NA	False	NA	NA	False	AATAAA	-20	NA	112114921	112193501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112115151_112146585_112146631_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ENSMUST00000053686.9	chr1	-	4731	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	0	0	0	0	multi-exon	FALSE	canonical	3	994	junction_5	17.625738755203	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTGTGGGTGCCTGGT	NA	False	NA	0	True	AATAAA	-32	NA	167112889	167050451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ENSMUST00000053699.13	chr2	-	6797	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	11.6758408483317	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTTCTTTTTCTAT	304	False	NA	NA	False	AATAAA	-36	NA	125624790	125578905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ENSMUST00000053705.8	chr19	+	2032	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCTGTTACTCTC	202	False	NA	9	True	AATAAA	-16	NA	5088853	5091159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5090061_5090334
ENSMUST00000053713.5	chr7	+	2734	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	384	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGTACTGAGATTCTGA	NA	False	NA	21	True	ATTAAA	-27	NA	18737968	18740702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18738000_18740700
ENSMUST00000053718.15	chr7	-	2134	9	FSM	ENSMUSG00000039194.17	ENSMUST00000053718.15	2134	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	6.47591692349431	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTTTCATGATGAACT	NA	False	NA	-16	True	AATAAA	-21	NA	79036707	79024618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033793_79034406_79034528_79036436
ENSMUST00000053729.14	chr2	+	1642	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	19.641792178923	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5608	False	NA	19	True	AATAAA	-21	NA	22785533	22830278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ENSMUST00000053737.9	chr5	+	3313	18	FSM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	20.649823847033	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578284	129648448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ENSMUST00000053740.15	chr11	+	1562	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTTGGAGATTAA	NA	False	NA	NA	False	NA	NA	NA	80274222	80286392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUST00000053740.15-1	chr11	+	2310	12	FSM	ENSMUSG00000017421.19	ENSMUST00000053740.15	1562	12	-66	-682	0	0	multi-exon	FALSE	canonical	3	261	junction_9	283.951136525079	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274156	80287074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUST00000053744.9	chr12	+	2344	1	FSM	ENSMUSG00000046791.9	ENSMUST00000053744.9	2344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	403	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTTTCTAAGCCTAG	3975	False	NA	17	True	ATTAAA	-21	NA	83997381	83999725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_83997400_83999700
ENSMUST00000053748.16	chr10	+	4385	20	FSM	ENSMUSG00000019978.17	ENSMUST00000053748.16	4385	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	117.367122957183	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTCACTTCTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	25235695	25399413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ENSMUST00000053753.8	chr4	-	1685	2	FSM	ENSMUSG00000050234.8	ENSMUST00000053753.8	1685	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGTGTGCACTGATGTT	NA	False	NA	0	True	AATAAA	-17	NA	127207832	127205213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_127206779_127207712
ENSMUST00000053760.12	chr1	+	3620	3	FSM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	-155	3928	-155	0	multi-exon	FALSE	canonical	2	10	junction_2	87	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGTCTCATTGACTA	NA	False	NA	-1	True	NA	NA	NA	78635599	78645301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_78635821_78640857_78640998_78642042
ENSMUST00000053764.7	chr3	+	5445	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	99	3121	99	-3121	multi-exon	FALSE	canonical	3	61	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGTGGCTTGGTGTGTGT	NA	False	NA	9	True	TATAAA	-24	NA	52175855	52257521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_52176844_52252459_52253812_52254416
ENSMUST00000053766.14	chr8	-	3880	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	0	0	0	0	multi-exon	TRUE	canonical	3	217	junction_1	15.7862947074897	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTTCCATTTCAGATG	NA	False	NA	-5	True	AATAAA	-17	NA	94739470	94698215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ENSMUST00000053768.14	chr12	-	1564	6	FSM	ENSMUSG00000046314.17	ENSMUST00000053768.14	4553	6	245	2744	-146	-2740	multi-exon	FALSE	canonical	0	0	junction_4	7.73563184232549	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCTACTCTCCTAGTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	45121247	44902010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_44902661_44908007_44908166_44948656_44948823_44949642_44949774_45066249_45066439_45120977
ENSMUST00000053771.14	chr8	+	5351	32	FSM	ENSMUSG00000036879.16	ENSMUST00000053771.14	5351	32	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	17.4946996581545	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTCACGGAAGCTGAACA	NA	False	NA	NA	False	NA	NA	NA	86567630	86788005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_86567733_86569632_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUST00000053811.10	chr12	+	2764	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_7	23.9123612470237	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTCCGGGATCTGTGCTC	NA	False	NA	20	True	ATTAAA	-20	NA	85157606	85180862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUST00000053819.6	chr4	+	2257	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	33.990586932267	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600927	131629017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ENSMUST00000053855.8	chr3	+	2722	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	6.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTGGCCTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	137329432	137334094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137329645_137329892_137330035_137331726
ENSMUST00000053862.12	chr4	-	1532	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	18.155147341732	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTGTTTCTGCTGCTC	NA	False	NA	-3	True	AGTAAA	-15	NA	139038019	139025838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ENSMUST00000053865.7	chr10	+	1240	1	FSM	ENSMUSG00000046687.7	ENSMUST00000053865.7	1240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGACAAAGAGGAGCGGG	NA	False	NA	NA	False	AATAGA	-1	NA	61906901	61908141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61906900_61908100
ENSMUST00000053871.5	chr10	-	3089	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGGGTTCTGAGAACT	NA	False	NA	-15	True	AATAAA	-26	NA	84369926	84362168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_84364642_84369310
ENSMUST00000053872.12	chr3	+	2805	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	33.5885024971343	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTTTCAGAGTAATC	1874	False	NA	21	True	AATAAA	-11	NA	95136042	95143720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ENSMUST00000053902.4	chr8	-	4319	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	7.29297607290741	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGTGGATGCTTGA	8170	False	NA	3	True	AATAAA	-23	NA	84059115	84039650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ENSMUST00000053913.13	chr5	-	4584	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	0	354	0	0	multi-exon	FALSE	canonical	3	33	junction_4	9.2499720794754	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGACTCTTGTCTTTG	NA	False	NA	-3	True	AATACA	-22	NA	108808677	108794912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ENSMUST00000053917.6	chr18	-	5757	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGACTTCATCTCATATG	18	False	9450168	0	True	AATAAA	-24	NA	9450150	9312303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ENSMUST00000053917.6-1	chr18	-	2114	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	-4	3647	0	0	multi-exon	FALSE	canonical	3	51	junction_9	12.9995251575197	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATCTCTGCTCCATTT	14	False	9450168	-19	True	AATAAA	-11	NA	9450154	9315950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ENSMUST00000053918.9	chr15	-	1339	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	15.2525407719501	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	False	NA	-13	True	NA	NA	NA	75793409	75788325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ENSMUST00000053927.12	chr13	-	6103	25	FSM	ENSMUSG00000021709.15	ENSMUST00000053927.12	6103	25	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	18.517821746151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	-5	True	NA	NA	NA	104025800	103955298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961357_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745
ENSMUST00000053949.7	chr14	+	3119	2	FSM	ENSMUSG00000044461.7	ENSMUST00000053949.7	3119	2	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCGGGGAATGCTTATT	NA	False	NA	5	True	AATAAA	-17	NA	59862756	59869109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_59863850_59867083
ENSMUST00000053950.10	chr7	-	2923	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	572	False	NA	-2	True	AATAAA	-16	NA	67294979	67163157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUST00000053950.10-0	chr7	-	1430	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	27	1466	0	-470	multi-exon	FALSE	canonical	3	32	junction_5	16.1894646431591	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACGTGTTGTCTTCTGT	599	False	NA	NA	False	AATACA	-15	NA	67294952	67164623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUST00000053969.7	chr12	+	7488	21	FSM	ENSMUSG00000042700.17	ENSMUST00000053969.7	7488	21	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	19.1637678967368	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGATTGGTTATTGCT	NA	False	NA	13	True	AATAAA	-22	NA	82358122	82498556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ENSMUST00000053981.6	chrX	+	1094	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	1.5	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTCTAGCTCCCT	NA	False	NA	14	True	AATAAA	-21	NA	69429482	69433023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_69429758_69431499_69431773_69432477
ENSMUST00000053986.9	chr10	-	3439	2	FSM	ENSMUSG00000051067.9	ENSMUST00000053986.9	3439	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACGTTTAGATATTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	80679873	80668634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80671976_80679775
ENSMUST00000054002.4	chr11	-	2552	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_1	0	2506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTGAGCCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-30	NA	117860012	117856904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_117859145_117859700
ENSMUST00000054014.9	chr15	-	4732	13	FSM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	13.6714930502203	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	-40	True	AATAAA	-15	NA	79430942	79411936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ENSMUST00000054034.7	chr16	+	8552	30	FSM	ENSMUSG00000034206.16	ENSMUST00000054034.7	8552	30	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	7.54534449468019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	3748	False	NA	2	True	AATAAA	-15	NA	36832147	36915779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_36832422_36833468_36833649_36835440_36835572_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ENSMUST00000054050.5	chr6	+	1384	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATGATTGACTTCTTG	1289	False	NA	17	True	NA	NA	NA	48653062	48655633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48653189_48654375
ENSMUST00000054052.15	chr8	+	3390	10	FSM	ENSMUSG00000049577.16	ENSMUST00000054052.15	3390	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	9.32274531706801	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGGAGGCCCAGCCTG	NA	False	NA	10	True	AATAAA	-19	NA	123008879	123063990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
ENSMUST00000054055.7	chr7	+	2610	1	FSM	ENSMUSG00000051527.12	ENSMUST00000054055.7	2610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTGCCTAAAATGAAGAA	NA	False	NA	NA	False	NA	NA	NA	6964158	6966768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6964200_6966800
ENSMUST00000054072.9	chr17	-	6639	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTGGTTGCTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	33577852	33548315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ENSMUST00000054072.9-0	chr17	-	3470	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	10	3159	0	1872	multi-exon	FALSE	canonical	3	29	junction_3	5.43650214343336	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACTTGTTTTAAATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	33577842	33551474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ENSMUST00000054080.15	chr6	-	2697	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	0	0	0	0	multi-exon	FALSE	canonical	3	1893	junction_3	186.383046439315	3442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCTCTGGTAAGAATTT	NA	False	NA	NA	False	AATAAA	-24	NA	148847965	148822532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ENSMUST00000054083.13	chr19	-	4714	14	FSM	ENSMUSG00000046324.13	ENSMUST00000054083.13	4714	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	94.8041269418537	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTGGAAAAAATGGATC	NA	False	NA	-17	True	AATAAA	-13	NA	29625587	29587601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29623366_29623669_29625435
ENSMUST00000054096.13	chr4	-	4715	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGTATAGTTTTC	NA	False	NA	NA	False	NA	NA	NA	134431601	134289000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
ENSMUST00000054096.13-0	chr4	-	3392	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	0	1323	0	-1323	multi-exon	FALSE	canonical	3	25	junction_8	6.8947219003122	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGAAATCAGATTGGAC	NA	False	NA	NA	False	AATAAA	-12	NA	134431601	134290323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
ENSMUST00000054098.4	chr19	+	3474	3	FSM	ENSMUSG00000044026.4	ENSMUST00000054098.4	3474	3	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	3	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384427	38394058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38384750_38388881_38389063_38391087
ENSMUST00000054107.6	chr7	+	2966	2	FSM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGTGTCTGCTTCCA	NA	False	NA	NA	False	GATAAA	-7	NA	96981533	96999420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_96981579_96996499
ENSMUST00000054125.9	chr10	+	2130	11	FSM	ENSMUSG00000025359.11	ENSMUST00000054125.9	2130	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	12.3385574521497	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTGTTGCGTTGCTGG	NA	False	NA	NA	False	NA	NA	NA	128542126	128556107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
ENSMUST00000054145.8	chr12	-	5706	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGCCTTCCTCCTCTCT	NA	False	NA	-2	True	AATAAA	-16	NA	80483375	80382621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
ENSMUST00000054145.8-0	chr12	-	4872	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	0	834	0	-834	multi-exon	FALSE	canonical	3	23	junction_5	6.59071316323203	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAACCCCTCAGTGTGT	NA	False	NA	NA	False	ATTAAA	-34	NA	80483375	80383455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
ENSMUST00000054173.4	chr11	+	1910	3	FSM	ENSMUSG00000050860.7	ENSMUST00000054173.4	1910	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGGACTTGTTCTCTTG	2198	False	NA	20	True	AATAAA	-16	NA	95715325	95722966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95715536_95719491_95719602_95721376
ENSMUST00000054178.8	chr16	-	4529	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGATTGATGCAACTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	76169937	76087749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
ENSMUST00000054178.8-0	chr16	-	7659	4	FSM	ENSMUSG00000048490.15	ENSMUST00000054178.8	4529	4	0	-3130	0	-332	multi-exon	FALSE	canonical	3	43	junction_1	2.86744175568088	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAAATGGCTTCTTTTTT	NA	False	NA	-4	True	AATAAA	-22	NA	76169937	76084619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_76091904_76127633_76127753_76149359_76149438_76169759
ENSMUST00000054197.7	chr9	-	2725	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	72	3597	0	2291	multi-exon	FALSE	canonical	3	250	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGCTGGTGGTTATG	8166	False	NA	-7	True	AATAAA	-13	NA	20888005	20877253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20879867_20887893
ENSMUST00000054212.7	chr8	-	3710	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	0	4255	0	0	multi-exon	FALSE	canonical	3	14	junction_2	30.9283041888817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATCTCCCAGCGTTTTGT	NA	False	NA	-3	True	NA	NA	NA	27664674	27633055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ENSMUST00000054213.5	chrX	-	1421	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_1	0	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGACGAAGAGGCTTT	NA	False	NA	-10	True	AATAAA	-16	NA	133442614	133438004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133439017_133442205
ENSMUST00000054220.10	chr8	-	603	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	0	657	0	0	multi-exon	FALSE	canonical	3	16397	junction_4	7934.97659101777	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350056	71348022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
ENSMUST00000054230.12	chr14	+	3462	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	0	4375	0	0	multi-exon	TRUE	canonical	3	68	junction_1	13.3913218167588	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGGCTCTAGGGTTT	NA	False	NA	27	True	ATTAAA	-19	NA	30437571	30540303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ENSMUST00000054234.10	chr2	+	2290	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	25	8023	0	817	multi-exon	FALSE	canonical	3	219	junction_1	27.0760246548697	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGAATTTTGTTC	NA	False	NA	28	True	TATAAA	-32	NA	38401679	38476595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ENSMUST00000054251.13	chr13	-	4626	14	FSM	ENSMUSG00000021147.18	ENSMUST00000054251.13	4626	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	22.0432603179245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTCTTGTGTTCTTACTC	NA	False	NA	-2	True	ATTAAA	-45	NA	8921766	8853003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_8855983_8869898_8870014_8870446_8870582_8885332_8885475_8886818_8887060_8892765_8892843_8894822_8894868_8897650_8897723_8899569_8899706_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8921518
ENSMUST00000054254.12	chr2	-	2061	4	FSM	ENSMUSG00000045319.14	ENSMUST00000054254.12	2061	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.3260852434302	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATGCTTGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	6134957	6104835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134706
ENSMUST00000054266.13	chr15	-	4664	8	FSM	ENSMUSG00000079020.10	ENSMUST00000054266.13	4664	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	133.067115181991	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGCTGTGTTTATG	NA	False	NA	-6	True	AATAAA	-24	NA	73496593	73452141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459369_73459574_73461234_73461424_73477290_73477926_73496174
ENSMUST00000054274.8	chr13	+	4348	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	5.35412613473634	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCAAGTTTGTTGGC	2226	False	NA	9	True	ATTAAA	-18	NA	94194303	94331917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
ENSMUST00000054287.9	chr10	+	3260	2	FSM	ENSMUSG00000044617.9	ENSMUST00000054287.9	5960	2	0	2700	0	-2700	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTGTGCATTCTGACT	NA	False	NA	NA	False	ATTAAA	-28	NA	127575406	127580518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127575532_127577383
ENSMUST00000054289.13	chr17	+	1094	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	8303	junction_1	1140.19655651997	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTGTCTGTCT	6237	False	NA	4	True	AATAAA	-23	NA	24939083	24940903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ENSMUST00000054294.7	chr5	-	4197	1	FSM	ENSMUSG00000044674.7	ENSMUST00000054294.7	4197	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTGTGTGCCTGAA	NA	False	NA	NA	False	AATAAA	-28	NA	4808035	4803838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_4803800_4808000
ENSMUST00000054301.14	chr7	-	2661	10	FSM	ENSMUSG00000003123.16	ENSMUST00000054301.14	2661	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	10.7806410858642	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGAGTGTGTTTTCCCAG	5313	False	NA	0	True	AATAAA	-27	NA	25089531	25079069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25089486
ENSMUST00000054310.4	chr7	+	1391	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGTCTGCTTCTCAT	7571	False	NA	NA	False	NA	NA	NA	100186306	100189576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100186400_100188278
ENSMUST00000054310.4-0	chr7	+	801	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	0	590	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAAGGAGTGAACTCG	7571	False	NA	-4	True	AATAAA	-5	NA	100186306	100188986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100186400_100188278
ENSMUST00000054343.15	chr7	+	1592	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	63.711753232822	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGTGTGTGAGTGTGA	1400	False	NA	19	True	ATTAAA	-24	NA	44498647	44504845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ENSMUST00000054344.11	chr6	-	4424	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	6.4238957016875	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGAACATCTTCAGGAT	NA	False	NA	-6	True	AATAAA	-22	NA	97126143	97086984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ENSMUST00000054356.16	chr3	+	2778	17	FSM	ENSMUSG00000045934.16	ENSMUST00000054356.16	2778	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	1.93245310421754	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTATTTTCTTGTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	96069320	96079034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
ENSMUST00000054387.8	chr3	+	3492	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAATCTGATATTTAG	NA	False	NA	NA	False	AAGAAA	-1	NA	51391386	51403653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_51392002_51400776
ENSMUST00000054399.6	chr8	+	2814	2	FSM	ENSMUSG00000045969.9	ENSMUST00000054399.6	2814	2	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTTTATTTCCTTATG	NA	False	NA	16	True	NA	NA	NA	11606065	11613251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11607046_11611417
ENSMUST00000054415.12	chr7	-	2822	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	0	2946	0	0	multi-exon	FALSE	canonical	3	42	junction_2	4	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTGTATTGTGGT	NA	False	NA	2	True	ATTAAA	-20	NA	127476000	127465164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127466536_127466927_127467597_127475218
ENSMUST00000054418.12	chr10	+	2981	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_8	16.985287751463	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTTTTTGGTCACTG	NA	False	NA	8	True	NA	NA	NA	43777802	43823858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ENSMUST00000054442.11	chr16	+	1884	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	18.2931681236466	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGCCTTTGTGTAGC	NA	False	NA	1	True	AATAAA	-26	NA	87151072	87165630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ENSMUST00000054445.9	chr6	+	982	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTCCTGTTGACATG	1	True	NA	14	True	AATAAA	-21	NA	29272624	29275445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29272810_29274648
ENSMUST00000054450.7	chr17	-	1120	6	FSM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_3	58.5409258553364	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGTACCTCATAATT	NA	False	NA	-14	True	NA	NA	NA	15747563	15741836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
ENSMUST00000054459.11	chr4	-	4631	10	FSM	ENSMUSG00000044700.16	ENSMUST00000054459.11	4631	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	68.5966921421107	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTATCAGGCTGTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	149822501	149799839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ENSMUST00000054462.11	chr1	-	4451	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_12	7.9882184715386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCACGTATTTCTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	39517836	39410572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ENSMUST00000054462.11-0	chr1	-	4076	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	0	375	0	0	multi-exon	FALSE	canonical	3	38	junction_12	7.9882184715386	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTTTTTTAAAATGTC	NA	False	NA	-6	True	AATAAA	-15	NA	39517836	39410947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ENSMUST00000054471.10	chr10	-	2564	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	5.07991688470939	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTGAAATAAATCCATGAA	NA	False	NA	69	True	AATAAA	-25	NA	100425257	100408126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUST00000054472.4	chr4	-	2756	4	FSM	ENSMUSG00000025418.8	ENSMUST00000054472.4	2756	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCACCTTTATTCGCCTGC	NA	False	NA	NA	False	NA	NA	NA	106349480	106340652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106342643_106343780_106344036_106345175_106345268_106349061
ENSMUST00000054477.8	chr19	+	1529	2	FSM	ENSMUSG00000047423.11	ENSMUST00000054477.8	1529	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACACTGTCCTGATGGTT	260	False	NA	34	True	AATAAA	-35	NA	5475184	5477341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5475337_5475964
ENSMUST00000054487.10	chr14	-	3397	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	0	0	0	0	multi-exon	TRUE	canonical	3	297	junction_5	54.835933399886	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGAGTGTATTGTGGT	NA	False	NA	-6	True	AGTAAA	-18	NA	54815015	54804928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ENSMUST00000054523.6	chr11	-	4021	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGAGTTGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	59054565	59046194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59049486_59049663_59050005_59054176
ENSMUST00000054523.6-0	chr11	-	1955	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	0	2066	0	-2066	multi-exon	FALSE	canonical	3	10	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGCCCTTTCAGACCT	NA	False	NA	-9	True	AGTAAA	-11	NA	59054565	59048260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59049486_59049663_59050005_59054176
ENSMUST00000054534.4	chrX	+	1178	3	FSM	ENSMUSG00000051257.4	ENSMUST00000054534.4	1178	3	0	0	0	0	multi-exon	FALSE	canonical	3	2592	junction_2	198.5	1153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTTTCACGTTAACGT	NA	False	NA	20	True	AATAAA	-21	NA	138234431	138238918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_138235157_138237570_138237800_138238694
ENSMUST00000054536.11	chr12	-	1928	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	25.4165300542777	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAAGCTGTCATGAATT	NA	False	NA	1	True	AATAAA	-26	NA	17050119	17038648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ENSMUST00000054538.13	chr4	-	1659	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	13.833270582187	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTGTCTAAATCACG	9051	False	NA	-3	True	AATAAA	-18	NA	43499695	43496141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ENSMUST00000054544.7	chr12	-	526	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	5332	junction_1	0	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCAAGCCTTGTGTTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	69230857	69229514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69229940_69230756
ENSMUST00000054544.7-0	chr12	-	459	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	70	-3	0	0	multi-exon	FALSE	canonical	3	5332	junction_1	0	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	False	NA	-5	True	AATAAA	-17	NA	69230787	69229511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69229940_69230756
ENSMUST00000054547.9	chr5	-	5535	16	FSM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	23.8687149959011	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTATTTGTCATTTGG	920	False	NA	-8	True	AATAAA	-15	NA	121329392	121268603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282760_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
ENSMUST00000054551.3	chr3	+	2578	1	FSM	ENSMUSG00000046999.3	ENSMUST00000054551.3	2578	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGTGCATTTTTATT	NA	False	NA	NA	False	ATTAAA	-44	NA	68776918	68779496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_68776900_68779500
ENSMUST00000054555.10	chr15	+	3743	3	FSM	ENSMUSG00000047003.16	ENSMUST00000054555.10	8270	3	0	4527	0	0	multi-exon	FALSE	canonical	2	8	junction_1	23	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGCTCTGTTGGGTT	NA	False	NA	17	True	AGTAAA	-17	NA	75488532	75497149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75488878_75489892_75491541_75495399
ENSMUST00000054562.4	chr7	-	3264	2	FSM	ENSMUSG00000048528.8	ENSMUST00000054562.4	3264	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGACGAATTATTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	132201366	132196606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132199546_132201041
ENSMUST00000054591.10	chr2	+	3899	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	4.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAGAAAAAAATTATCC	4784	False	NA	NA	False	NA	NA	NA	21210534	21219820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_21210657_21214695_21214853_21216200
ENSMUST00000054591.10-0	chr2	+	2586	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	35	1278	0	452	multi-exon	FALSE	canonical	3	53	junction_1	4.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATAGCATTTGCTTTATT	4819	False	NA	13	True	AATAAA	-22	NA	21210569	21218542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_21210657_21214695_21214853_21216200
ENSMUST00000054594.15	chr7	+	1355	8	FSM	ENSMUSG00000019737.15	ENSMUST00000054594.15	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	40.5593543401494	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014240	30018471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
ENSMUST00000054622.15	chr2	+	4401	34	FSM	ENSMUSG00000038685.19	ENSMUST00000054622.15	4401	34	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_31	50.0269348938753	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961554	180998409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997102_180997346_180997443_180997606_180997716
ENSMUST00000054636.7	chr12	-	2139	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111679691	111675921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111677847_111679477
ENSMUST00000054636.7-0	chr12	-	2075	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	64	0	64	0	multi-exon	FALSE	canonical	3	159	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCCCCCTGTGCTGTTC	NA	False	NA	NA	False	CATAAA	-20	NA	111679627	111675921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111677847_111679477
ENSMUST00000054654.13	chr11	-	3051	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCAGGTTTTTAGTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	62680288	62669212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ENSMUST00000054654.13-0	chr11	-	1788	6	FSM	ENSMUSG00000047342.18	ENSMUST00000054654.13	3051	6	45	1218	0	0	multi-exon	FALSE	canonical	3	31	junction_3	11.4262854856686	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGGGTGTGTCTGTGTG	NA	False	NA	-5	True	AATAGA	-16	NA	62680243	62670430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_62671726_62674497_62674588_62675704_62675820_62678784_62678871_62679755_62679916_62680201
ENSMUST00000054665.10	chr1	-	1964	9	FSM	ENSMUSG00000067653.13	ENSMUST00000054665.10	1964	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	18.2397231338636	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGAAGGCCTCTTGAAC	NA	False	NA	NA	False	NA	NA	NA	36574820	36569614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36574762
ENSMUST00000054666.7	chr10	+	834	8	FSM	ENSMUSG00000045193.14	ENSMUST00000054666.7	834	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	141.847863313236	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGACTCTGTGGCTTGG	6191	False	NA	NA	False	AATAAA	-17	NA	80003673	80008620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80008247_80008347_80008470
ENSMUST00000054674.15	chr1	-	4186	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	54	638	0	-638	multi-exon	FALSE	canonical	3	259	junction_7	57.9852197916479	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8645	False	NA	-15	True	AATAAA	-23	NA	88205301	88190830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ENSMUST00000054680.12	chr7	+	1477	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	62	928	0	0	multi-exon	FALSE	canonical	3	89	junction_1	90.9004339312464	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGACTCTCCGGTGTTG	3018	False	NA	15	True	AATAAA	-24	NA	6175562	6193420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
ENSMUST00000054684.14	chr11	+	1415	8	FSM	ENSMUSG00000020376.18	ENSMUST00000054684.14	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	82.1161447249552	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAGCGTGTGTTTCAGAG	NA	False	NA	29	True	NA	NA	NA	49916172	49995585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49995375
ENSMUST00000054697.7	chrX	+	5211	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTGTGTCTGCCTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	97981366	97992623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ENSMUST00000054697.7-0	chrX	+	3890	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	446	875	0	-875	multi-exon	FALSE	canonical	3	206	junction_6	19.4736288919714	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCCTTTCAAGGTGTAC	NA	False	NA	8	True	TTTAAA	-45	NA	97981812	97991748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ENSMUST00000054708.5	chr9	+	2205	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	28.7920887571569	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTGCTCCATTTTC	3774	False	NA	NA	False	AATAAA	-32	NA	44238141	44245197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUST00000054723.9	chr4	+	1235	11	FSM	ENSMUSG00000028318.15	ENSMUST00000054723.9	1235	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	16.4754362612952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTCTGTTCACTTCCA	587	False	NA	NA	False	AATGAA	-17	NA	45019234	45032112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUST00000054730.10	chr13	-	3251	13	FSM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	144.098827969634	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGCTTAAAAACAATTT	NA	False	NA	-15	True	AATAAA	-17	NA	65260788	65212959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317_65260473_65260569
ENSMUST00000054764.9	chr10	-	2497	4	FSM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1.88561808316413	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGAATCTCTTGGGCC	8592	False	NA	-7	True	AATAAA	-18	NA	128509942	128505762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128507796_128507972_128508151_128508407_128508472_128509720
ENSMUST00000054776.4	chr4	-	2977	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	0	981	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTTATATTG	NA	False	NA	-1	True	AATAAA	-17	NA	11007676	10988661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_10991355_11007392
ENSMUST00000054780.10	chr17	+	2028	4	FSM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	17.3781471969828	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATATTTATGTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	56199119	56205928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56199187_56202820_56202948_56203140_56203202_56204155
ENSMUST00000054815.15	chr12	-	4389	17	FSM	ENSMUSG00000021285.16	ENSMUST00000054815.15	4389	17	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	8.14108983797624	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTCCTTTGAGTCTT	1113	False	NA	0	True	AATAAA	-19	NA	111874544	111794890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
ENSMUST00000054829.13	chr5	+	904	7	FSM	ENSMUSG00000029149.15	ENSMUST00000054829.13	904	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	21.1344899788631	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409049	31410541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31409159_31409262_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410441
ENSMUST00000054835.15	chr13	+	2111	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTCTTTCCTTTCCTTGT	NA	False	NA	7	True	ATTAAA	-18	NA	108295271	108331519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUST00000054835.15-0	chr13	+	1643	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	0	468	0	-460	multi-exon	FALSE	canonical	3	49	junction_3	12.8281714780819	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTCTCCTTGAGCGCA	NA	False	NA	16	True	AATATA	-25	NA	108295271	108331051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUST00000054836.7	chr5	+	5382	2	FSM	ENSMUSG00000046607.7	ENSMUST00000054836.7	5382	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGCCTCTGTGTGTTTT	NA	False	NA	NA	False	TTTAAA	-21	NA	118307812	118327543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_118308194_118322542
ENSMUST00000054857.13	chr4	+	3210	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	17	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTGATTTCTTTGTC	14	True	NA	12	True	AATAAA	-21	NA	5644120	5801101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_5644411_5729570_5729658_5798268
ENSMUST00000054857.13-0	chr4	+	2156	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	0	1054	0	101	multi-exon	FALSE	canonical	3	35	junction_1	17	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGTTGAGAGCAGAAT	14	True	NA	3	True	ATTAAA	-17	NA	5644120	5800047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_5644411_5729570_5729658_5798268
ENSMUST00000054865.13	chr5	-	3063	23	FSM	ENSMUSG00000040473.16	ENSMUST00000054865.13	4956	23	0	1893	0	0	multi-exon	FALSE	canonical	2	4	junction_19	2.58132197536376	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCTGCAACGTCTTTG	NA	False	NA	-16	True	AATAAA	-1	NA	5714239	5631170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ENSMUST00000054908.10	chr14	+	1055	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	118	6219	0	0	multi-exon	FALSE	canonical	3	1684	junction_8	86.763527603609	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGTGTTCGAGAGAGC	NA	False	NA	31	True	AATAAA	-20	NA	79825248	79866417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUST00000054912.15	chr2	+	677	4	FSM	ENSMUSG00000047459.15	ENSMUST00000054912.15	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	797.62021037584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTGTTGTGTCTTTA	NA	False	NA	14	True	AGTAAA	-16	NA	155078452	155092192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155078538_155084654_155084727_155089690_155089859_155091840
ENSMUST00000054917.12	chr4	-	4948	17	FSM	ENSMUSG00000028906.18	ENSMUST00000054917.12	4948	17	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	23.971907386564	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131734748	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268
ENSMUST00000054920.5	chr4	-	4173	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTGTTGTTTTCTTGCT	8	True	NA	-2	True	NA	NA	NA	41503076	41495603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41499691_41502990
ENSMUST00000054952.4	chr11	-	1332	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGCGCATGGAATTTG	NA	False	NA	-27	True	AATAAA	-25	NA	73067863	73066344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_73067578_73067764
ENSMUST00000054952.4-0	chr11	-	619	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	35	678	0	139	multi-exon	FALSE	canonical	3	946	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTCGTTCCTTGCTTA	NA	False	NA	-23	True	ATTAAA	-12	NA	73067828	73067022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_73067578_73067764
ENSMUST00000054956.15	chr19	+	2024	11	FSM	ENSMUSG00000024776.19	ENSMUST00000054956.15	2024	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	15.5630973780928	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGGTTGTCACATTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	34169628	34217733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUST00000054960.9	chr8	-	5080	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCAAGACCTTTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	127320725	127315034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_127318568_127319178
ENSMUST00000054960.9-0	chr8	-	2720	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	0	2360	0	-2360	multi-exon	FALSE	canonical	3	202	junction_1	0	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCTTACTGTCTGTCA	NA	False	NA	0	True	AATACA	-20	NA	127320725	127317394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_127318568_127319178
ENSMUST00000054963.10	chr14	-	1612	8	FSM	ENSMUSG00000021273.12	ENSMUST00000054963.10	2860	8	-4	1252	0	-1252	multi-exon	FALSE	canonical	3	727	junction_5	70.2819395037456	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTCCTTGTCTTTCTC	4307	False	NA	-36	True	AATAGA	-11	NA	63415246	63383853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131
ENSMUST00000054979.10	chr5	+	4512	20	FSM	ENSMUSG00000029313.19	ENSMUST00000054979.10	8323	20	-265	4076	-265	-4076	multi-exon	FALSE	canonical	2	26	junction_1	65.0524612499899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGATTTTGTTTTCTTT	NA	False	NA	NA	False	TTTAAA	-26	NA	103901762	103999112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_103902212_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ENSMUST00000054990.11	chr3	-	3816	12	FSM	ENSMUSG00000027993.17	ENSMUST00000054990.11	3816	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	26.7448921515557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	AAGAAA	-43	NA	84178098	84071028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84177940
ENSMUST00000055006.12	chr11	+	3906	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	2.33238075793812	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTGCTAGTATTTG	NA	False	NA	NA	False	TTTAAA	-5	NA	62711056	62733762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUST00000055006.12-0	chr11	+	2284	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	0	1622	0	-143	multi-exon	TRUE	canonical	3	37	junction_4	2.33238075793812	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCGTTTGGAGTGCTTT	NA	False	NA	26	True	AATAAA	-36	NA	62711056	62732140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUST00000055009.15	chr9	+	4967	23	FSM	ENSMUSG00000040325.17	ENSMUST00000055009.15	4967	23	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_22	40.9331242535556	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTACCAGGCATTTCT	NA	False	NA	NA	False	TATAAA	-16	NA	106706267	106757637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ENSMUST00000055013.10	chr4	-	3001	6	FSM	ENSMUSG00000043872.15	ENSMUST00000055013.10	3001	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	13.905394636615	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCTAATGAAGTTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	126952779	126941385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585
ENSMUST00000055018.11	chr4	-	3512	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	72.8941393772885	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	401	False	NA	-5	True	AATAAA	-22	NA	58553357	58435254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ENSMUST00000055028.9	chr4	-	4316	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACACGGTCTCCTTTGCTTC	NA	False	NA	0	True	ATTAAA	-26	NA	45012394	44991241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_44995387_45012223
ENSMUST00000055056.16	chr11	+	4260	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCACTGTGCCTGGCT	NA	False	NA	NA	False	NA	NA	NA	80099880	80158733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ENSMUST00000055056.16-0	chr11	+	3136	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	29	1095	0	0	multi-exon	FALSE	canonical	3	75	junction_18	152.933077899418	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ENSMUST00000055077.7	chr8	+	2452	7	FSM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	39.9110121255887	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTATTTATT	NA	False	NA	11	True	ATTAAA	-24	NA	84748099	84756924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84748158_84750980_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ENSMUST00000055081.14	chr2	-	3163	15	FSM	ENSMUSG00000027194.17	ENSMUST00000055081.14	3163	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	35.2226880732014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTGGTGTAGTTTTTC	NA	False	NA	-2	True	AATAAA	-21	NA	94196942	94131111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866
ENSMUST00000055096.5	chr9	-	2317	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	10	1301	0	-1301	multi-exon	FALSE	canonical	3	14	junction_3	5.49706167646225	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATGTCTGCCGGGTTTT	NA	False	NA	0	True	AATAAA	-27	NA	49397515	49349563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
ENSMUST00000055104.6	chrX	+	1198	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	0	1605	0	-1605	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATGTTTCTTCTGAATC	NA	False	NA	NA	False	AATAAA	-25	NA	135608730	135610622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135608838_135609531
ENSMUST00000055110.11	chr7	+	1479	2	FSM	ENSMUSG00000030600.16	ENSMUST00000055110.11	1479	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGGGAAAAATGACCTG	90	False	NA	NA	False	NA	NA	NA	28158082	28161492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28159489_28161419
ENSMUST00000055117.9	chr17	-	2627	9	FSM	ENSMUSG00000044857.9	ENSMUST00000055117.9	2627	9	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_7	66.5158580715907	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	7993	False	NA	-1	True	AATAAA	-19	NA	27423443	27408573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ENSMUST00000055128.12	chr5	-	3513	14	FSM	ENSMUSG00000046985.12	ENSMUST00000055128.12	3513	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	11.6390487421138	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTTCTTGTGGCAACG	NA	False	NA	5	True	AATAAA	-32	NA	44383964	44332495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ENSMUST00000055131.13	chr4	+	5722	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_19	271.050863574936	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	570	False	NA	17	True	ATTAAA	-27	NA	137321517	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ENSMUST00000055190.8	chr5	-	3247	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTGTAAGTGGTACC	NA	False	NA	-1	True	AATAAA	-17	NA	144294922	144201335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ENSMUST00000055190.8-0	chr5	-	2310	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	0	937	0	-937	multi-exon	FALSE	canonical	2	11	junction_13	4.28979799803037	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAATTTTTACCTTTTGA	NA	False	NA	NA	False	ATTAAA	-14	NA	144294922	144202272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ENSMUST00000055195.11	chr5	-	2757	17	FSM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	-6	2175	0	142	multi-exon	FALSE	canonical	3	26	junction_2	11.2080816266656	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATTGTTGAATTTAGTT	NA	False	NA	-3	True	AGTAAA	-12	NA	29583388	29436974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ENSMUST00000055213.11	chr4	+	872	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	98.9605982196955	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCAGCTGCCTCTTT	NA	False	NA	40	True	ACTAAA	-16	NA	124978943	125003682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ENSMUST00000055220.7	chr15	-	2856	3	FSM	ENSMUSG00000055762.17	ENSMUST00000055220.7	2856	3	0	0	0	0	multi-exon	FALSE	canonical	3	2867	junction_1	91	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAAGCTGGGTCAAG	NA	False	NA	NA	False	NA	NA	NA	75781168	75769954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75772612_75772980_75773105_75781093
ENSMUST00000055221.9	chr17	-	1972	2	FSM	ENSMUSG00000050138.9	ENSMUST00000055221.9	1972	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTTTTCTAAAGAAAT	7972	False	NA	NA	False	AATAAA	-31	NA	88105422	88053228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_88054270_88104491
ENSMUST00000055226.13	chr1	-	8315	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_37	371.719226311845	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692334	71624682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUST00000055241.13	chr2	-	9085	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_17	176.960671803312	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9821	False	NA	-6	True	AATAAA	-21	NA	120394288	120337300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ENSMUST00000055242.11	chr7	-	4143	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	0	0	0	0	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCCCCAACTTTGAGA	5148	False	NA	NA	False	AAAACA	-17	NA	19398958	19365495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ENSMUST00000055242.11-0	chr7	-	2465	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	0	1678	0	0	multi-exon	FALSE	canonical	3	1363	junction_5	136.704319631521	2582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAACCACCGCACCTC	5148	False	NA	-17	True	AATAAA	-21	NA	19398958	19367173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ENSMUST00000055244.13	chr2	+	3648	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_10	50.5976051514182	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTAGTCTGTTTTGTTT	659	False	NA	29	True	AATAAA	-30	NA	31462828	31507531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ENSMUST00000055245.13	chr5	-	2139	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	23.2725025512943	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968831	100953057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUST00000055257.7	chr8	-	1338	2	FSM	ENSMUSG00000043068.7	ENSMUST00000055257.7	1338	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCTGTGGTTAAACATGT	NA	False	NA	NA	False	ATTAAA	-20	NA	125478571	125466995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125468041_125478278
ENSMUST00000055261.11	chr6	+	4412	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	40.3554209493595	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTATTATCTACGTC	NA	False	NA	98	True	ATTAAA	-21	NA	83302997	83320758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
ENSMUST00000055262.13	chr12	-	1490	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCATTTTCTGATTCGT	NA	False	NA	NA	False	NA	NA	NA	79219441	79202790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ENSMUST00000055262.13-0	chr12	-	1030	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	219	241	0	71	multi-exon	FALSE	canonical	3	652	junction_4	37.0534748707864	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACATGTATAACATTAAT	NA	False	NA	-4	True	AATAAA	-23	NA	79219222	79203031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ENSMUST00000055296.11	chr6	+	9216	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	38.128991835157	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATCATCTGGATG	NA	False	NA	NA	False	NA	NA	NA	71886044	71959459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ENSMUST00000055303.5	chr14	-	3946	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTTTCTTGATGTCTT	NA	False	NA	NA	False	NA	NA	NA	31216997	31198776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUST00000055303.5-0	chr14	-	1964	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	10	1972	0	793	multi-exon	FALSE	canonical	3	247	junction_5	24.3359815910516	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216987	31200748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUST00000055316.10	chr8	-	1306	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAAAAAAAAGCTCA	NA	False	NA	NA	False	NA	NA	NA	107775246	107773151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107773904_107774692
ENSMUST00000055327.8	chr4	-	1765	6	FSM	ENSMUSG00000028435.9	ENSMUST00000055327.8	1765	6	0	0	0	0	multi-exon	FALSE	canonical	3	1694	junction_1	130.458269189806	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41093703_41093781_41094000_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUST00000055349.15	chr17	+	2741	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_3	5.73488351136175	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGTTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181532	22213347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
ENSMUST00000055352.8	chr17	+	2972	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	46	1402	0	-1402	multi-exon	TRUE	canonical	2	12	junction_2	12.6526677028997	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTCATTAGTCTTTGAA	NA	False	NA	3	True	ATTAAA	-17	NA	15616509	15652298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ENSMUST00000055372.14	chr4	+	3954	13	FSM	ENSMUSG00000040720.16	ENSMUST00000055372.14	3954	13	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_9	7.54799458281617	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACACATTATACTTTTT	2	True	NA	NA	False	AATAAA	-15	NA	11485957	11527621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594
ENSMUST00000055389.9	chr16	-	3470	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	21.3124898175277	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACAGTGTCTTCTGTTAT	NA	False	NA	-5	True	ATTAAA	-12	NA	30900250	30773961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
ENSMUST00000055408.13	chr5	-	3026	9	FSM	ENSMUSG00000041609.17	ENSMUST00000055408.13	3026	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.84032319311183	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGCCTCAGTTCCTGG	NA	False	NA	-1	True	AATAAA	-16	NA	115869680	115786233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115787629_115789877_115789999_115793959_115794091_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180
ENSMUST00000055409.6	chr11	+	2028	7	FSM	ENSMUSG00000048217.12	ENSMUST00000055409.6	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	3.13138237134266	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGTCTCAAAAACCATC	NA	False	NA	12	True	NA	NA	NA	102036374	102040303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102036818_102037315_102037591_102037688_102037903_102038189_102038371_102038635_102038808_102038917_102039101_102039743
ENSMUST00000055413.13	chr16	+	1281	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	45.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCTCAATTAGGGTT	NA	False	NA	17	True	ATTAAA	-17	NA	18655327	18658910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18655370_18655455_18655624_18657839
ENSMUST00000055424.13	chr11	-	606	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_4	137.848422189012	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
ENSMUST00000055425.15	chr3	+	3060	18	FSM	ENSMUSG00000058388.15	ENSMUST00000055425.15	3060	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	22.8624592186075	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875683	103914806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ENSMUST00000055433.5	chr9	-	2720	3	FSM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTGTAAAGTGCTCTA	NA	False	NA	NA	False	AATAAA	-22	NA	96900896	96825534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96826758_96877627_96878475_96900246
ENSMUST00000055436.5	chr4	-	1804	1	FSM	ENSMUSG00000043155.5	ENSMUST00000055436.5	1804	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCCTCTGTGTCTT	7088	False	NA	-6	True	AATAAA	-26	NA	116678904	116677100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116677100_116678900
ENSMUST00000055438.5	chr11	-	6344	7	FSM	ENSMUSG00000046442.5	ENSMUST00000055438.5	6344	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCACCGGTTATTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	87249849	87117731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_87122755_87127955_87128050_87128257_87128402_87131428_87131618_87135094_87135295_87139757_87139877_87249274
ENSMUST00000055439.4	chr11	-	1433	7	FSM	ENSMUSG00000042988.11	ENSMUST00000055439.4	1433	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	6.86577664134866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTTTGTAACATATTT	2350	False	NA	NA	False	AATATA	-11	NA	120548870	120544670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711
ENSMUST00000055458.6	chr19	-	1484	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	0	1927	0	-1927	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGAGCATCCTGTCCCC	NA	False	NA	-15	True	AATAAA	-16	NA	5974844	5967590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5969022_5974791
ENSMUST00000055485.12	chr2	+	2534	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	10.2705586508232	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCCTCTGTCCGTCAC	NA	False	NA	15	True	AATAAA	-16	NA	179666779	179677254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ENSMUST00000055506.9	chr7	-	6961	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_34	23.9112782676933	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGTATTGGCCTAATG	NA	False	NA	1	True	ATTAAA	-16	NA	125306952	125240125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ENSMUST00000055518.13	chr13	-	4008	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	4	3101	0	0	multi-exon	FALSE	canonical	2	8	junction_10	7.37443029814658	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATTGCTGAGTCCAAC	NA	False	NA	NA	False	AATAAA	-32	NA	101904721	101820171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
ENSMUST00000055528.11	chr7	+	2620	3	FSM	ENSMUSG00000054715.12	ENSMUST00000055528.11	2620	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCCTTGTCTGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	12631741	12642166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12631871_12637527_12638013_12640160
ENSMUST00000055535.9	chr9	+	9148	20	FSM	ENSMUSG00000036030.10	ENSMUST00000055535.9	9148	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	6.01935934968244	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAACAAAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	72714155	72824573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72714815_72716736_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185
ENSMUST00000055539.11	chr10	+	4457	29	FSM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_23	47.0561431934758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTGTTGTCTTCCTCC	6591	False	NA	20	True	AATAAA	-20	NA	128067933	128088810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ENSMUST00000055549.4	chr11	-	2602	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATACTAGTATCTTGTAA	3582	False	NA	-18	True	AATAAA	-18	NA	22810488	22784864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_22787196_22810217
ENSMUST00000055559.8	chr6	+	2351	3	FSM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTTATTTTTGGTTTG	NA	False	NA	15	True	AATAAA	-19	NA	49296207	49318516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49296415_49310844_49311232_49316759
ENSMUST00000055562.3	chr15	+	1031	2	FSM	ENSMUSG00000050328.3	ENSMUST00000055562.3	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTCTGGCAGGCCCTTC	NA	False	NA	NA	False	NA	NA	NA	102845191	102847044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102845892_102846713
ENSMUST00000055575.8	chr4	+	943	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGTGCCTGATGCCCTG	NA	False	NA	30	True	CATAAA	-21	NA	125990415	125992377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_125990603_125991621
ENSMUST00000055576.12	chr7	+	4405	22	FSM	ENSMUSG00000030513.15	ENSMUST00000055576.12	4405	22	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	20.9878487682365	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGCCAGTGGGTGAA	NA	False	NA	61	True	AATAAA	-13	NA	65511776	65700134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ENSMUST00000055647.15	chr4	-	10096	47	FSM	ENSMUSG00000063077.16	ENSMUST00000055647.15	5992	47	-187	-3917	0	0	multi-exon	FALSE	canonical	2	6	junction_23	26.5390624108764	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCGTGCTTTAGTCTTT	7239	False	NA	-2	True	AATAAA	-21	NA	149392150	149260775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ENSMUST00000055673.2	chr12	-	2395	3	FSM	ENSMUSG00000043673.12	ENSMUST00000055673.2	2933	3	0	538	0	0	multi-exon	FALSE	canonical	3	56	junction_1	7	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCCTTGTTTCTATGT	4007	False	NA	-2	True	AATAAA	-18	NA	11200374	11140740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_11142757_11169759_11169950_11200185
ENSMUST00000055676.4	chr3	-	3046	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTTGTGAAGAAAACTT	NA	False	NA	1	True	AATAAA	-18	NA	115508721	115504081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_115506764_115508357
ENSMUST00000055688.10	chr4	-	3205	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	6.59966329107444	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGTGCCTCCTTAGG	NA	False	NA	-5	True	AATAAA	-15	NA	152080715	152074089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
ENSMUST00000055698.8	chr14	-	2406	2	FSM	ENSMUSG00000046352.8	ENSMUST00000055698.8	2406	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATGGTAAGTTTTTCTGG	NA	False	NA	NA	False	ATTAAA	-36	NA	57342159	57336056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57338229_57341925
ENSMUST00000055704.12	chr9	-	2215	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_1	123.439193026364	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4770	False	NA	0	True	AATAAA	-24	NA	107512566	107491323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ENSMUST00000055719.8	chr15	+	1470	4	FSM	ENSMUSG00000047728.14	ENSMUST00000055719.8	1470	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTGAATAACTGTG	1450	False	NA	NA	False	NA	NA	NA	75088444	75094510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75088604_75089563_75089681_75092469_75092640_75093486
ENSMUST00000055738.12	chrX	-	1974	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	61	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139443936	139440276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_139441857_139442853_139442906_139443594
ENSMUST00000055758.16	chr2	+	8072	39	FSM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	0	0	0	0	multi-exon	FALSE	non_canonical	3	59	junction_28	22.5386863475108	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATGTTTATGTTTTC	4326	False	NA	23	True	AATAAA	-37	NA	69727589	69854357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ENSMUST00000055792.8	chr19	+	1631	2	FSM	ENSMUSG00000047044.8	ENSMUST00000055792.8	1631	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGTATCAGTGACTAA	9357	False	NA	26	True	AATAAA	-19	NA	18690599	18695792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_18691024_18694585
ENSMUST00000055808.6	chr5	-	3520	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_1	0	2178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGCGGTGCCCAGCTTC	NA	False	NA	-26	True	AATAAA	-14	NA	135963453	135937262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135940506_135963176
ENSMUST00000055820.7	chr9	+	638	2	FSM	ENSMUSG00000079225.4	ENSMUST00000055820.7	638	2	0	0	0	0	multi-exon	FALSE	canonical	3	2455	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	81559650	81560730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_81559913_81560354
ENSMUST00000055833.12	chr2	-	4210	14	FSM	ENSMUSG00000027104.19	ENSMUST00000055833.12	4210	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	80.0395612241018	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722958	73646852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710724_73722818
ENSMUST00000055843.9	chr9	-	6511	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTGATTTGTAATTTC	NA	False	NA	40	True	AATAAA	-23	NA	106764627	106758116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106758100_106764600
ENSMUST00000055844.10	chr9	+	1987	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_4	112.168059042616	1706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTGATTTTTGCTTC	NA	False	NA	14	True	AATAAA	-14	NA	65537840	65567808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUST00000055858.14	chr7	+	1982	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	215.342889364845	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896145	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000055911.6	chr19	-	2115	2	FSM	ENSMUSG00000044390.6	ENSMUST00000055911.6	2115	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGAGGACCTTTCTT	8066	False	NA	NA	False	AATAAA	-20	NA	5944135	5941165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5943143_5943997
ENSMUST00000055922.4	chr4	+	3066	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGGTGTTATATTTT	NA	False	NA	NA	False	ATTAAA	-2	NA	80828882	80873865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_80829883_80871799
ENSMUST00000055922.4-0	chr4	+	1743	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	0	1323	0	-1323	multi-exon	FALSE	canonical	3	28	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCGTGGTTTGTGGTGTT	NA	False	NA	21	True	AATAAA	-23	NA	80828882	80872542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_80829883_80871799
ENSMUST00000055931.5	chr11	+	4632	2	FSM	ENSMUSG00000047205.13	ENSMUST00000055931.5	4632	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCTCATCCTCAAAT	5245	False	NA	NA	False	AATAAA	-17	NA	3845239	3851296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3845518_3846942
ENSMUST00000055941.7	chrX	+	4866	23	FSM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_4	14.4839609212032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGCCCAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	105070927	105168532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ENSMUST00000055984.7	chr3	+	2893	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	9.0921211313239	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837620	87847993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
ENSMUST00000055993.13	chr7	-	5281	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATTCAAAAAGTCACTT	NA	False	NA	NA	False	AATAAA	-30	NA	108682538	108633518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ENSMUST00000055993.13-0	chr7	-	4064	6	FSM	ENSMUSG00000048330.15	ENSMUST00000055993.13	5281	6	20	1197	0	-1197	multi-exon	FALSE	canonical	3	56	junction_4	4.1182520563948	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTCTACACAATTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	108682518	108634715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_108638091_108647157_108647304_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ENSMUST00000056028.11	chr7	+	4109	4	FSM	ENSMUSG00000042978.12	ENSMUST00000056028.11	4109	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	13.4412301024373	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGAGCTGCAGGGTGG	NA	False	NA	19	True	AATAAA	-16	NA	125871790	125894188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_125872272_125889028_125889262_125890214_125890418_125890996
ENSMUST00000056032.9	chr17	-	2574	14	FSM	ENSMUSG00000024137.10	ENSMUST00000056032.9	2574	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	25.0001183429152	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTTGTGATTGGGTAG	NA	False	NA	-1	True	AATAAA	-16	NA	24674285	24662752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ENSMUST00000056045.5	chr5	+	3027	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	12.2873753029984	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTGTCACTGTCCCA	NA	False	NA	91	True	AATAAA	-13	NA	21629955	21687122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
ENSMUST00000056078.9	chr7	-	722	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_2	218	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGTGTGCGGTGTCTGT	1644	False	NA	-6	True	AATAAA	-23	NA	28441245	28439066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28439665_28440911_28440980_28441189
ENSMUST00000056089.8	chr1	-	868	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	294	149	294	-149	multi-exon	FALSE	canonical	3	40	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAGAGTATCCTAAAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	120001510	119995255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119996055_120001441
ENSMUST00000056107.11	chr17	+	2909	4	FSM	ENSMUSG00000062743.10	ENSMUST00000056107.11	2909	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACCCGTGGTTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	21604009	21619524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21604283_21612727_21612814_21613437_21613565_21617101
ENSMUST00000056108.12	chr2	+	1618	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	18.7742435858871	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4768	False	NA	33	True	AATAAA	-35	NA	11783301	11795136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
ENSMUST00000056147.14	chr17	-	1889	4	FSM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.90668171555645	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATATTTATGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	56252259	56245380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56252171
ENSMUST00000056149.15	chr2	-	1999	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	0	0	0	0	multi-exon	FALSE	canonical	2	181	junction_4	35.7897991363771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAATCAGAGTTTCTTC	NA	False	NA	-5	True	AATAAA	-38	NA	150746661	150674412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ENSMUST00000056153.8	chr11	-	1206	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	0	3745	0	-3745	multi-exon	FALSE	canonical	2	4	junction_5	1.6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTGTGCATCCTGATC	429	False	NA	NA	False	AAGAAA	-13	NA	115188340	115174192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
ENSMUST00000056176.8	chr2	-	5221	28	FSM	ENSMUSG00000009621.19	ENSMUST00000056176.8	5221	28	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	15.8636162645109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTTAGCCTTCTGTG	NA	False	NA	-2	True	AATAAA	-19	NA	27317045	27152115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_27154224_27157241_27157397_27158162_27158250_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27169202_27169220_27171912_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ENSMUST00000056181.7	chr2	+	1525	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	26	1039	0	147	multi-exon	FALSE	canonical	3	13	junction_2	6.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGCAATCTCTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	164627936	164634691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164628245_164628617_164628776_164633632
ENSMUST00000056228.8	chr12	-	1346	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	0	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCTTTTATGGTTAA	NA	False	NA	NA	False	ATTAAA	-17	NA	54703358	54692176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54693321_54703156
ENSMUST00000056232.7	chr7	+	3043	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTGTGGTTATGTGTA	8302	False	NA	28	True	AATAAA	-18	NA	126832426	126837215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126832690_126834435
ENSMUST00000056237.15	chr8	+	2781	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	20.627751506924	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGTATGTAACATTAT	NA	False	NA	13	True	AATAAA	-18	NA	78276025	78307967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ENSMUST00000056246.8	chr7	-	2042	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	2.54950975679639	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAATGACTCTTGAGGT	6236	False	NA	-5	True	AATAAA	-21	NA	7124487	7117688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
ENSMUST00000056288.7	chr7	+	1932	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTGTATGACCTCTG	NA	False	NA	6	True	NA	NA	NA	126690530	126693158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126690645_126691340
ENSMUST00000056290.13	chr11	-	4694	17	FSM	ENSMUSG00000009073.17	ENSMUST00000056290.13	2394	17	-480	-1820	71	0	multi-exon	FALSE	canonical	3	247	junction_1	34.4219565648148	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	8916	False	NA	-8	True	AATAAA	-21	NA	4799465	4715844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ENSMUST00000056292.8	chr3	+	1655	4	FSM	ENSMUSG00000048100.14	ENSMUST00000056292.8	1655	4	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	76.856287243718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	14	True	AATAAA	-23	NA	108479014	108489385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108479430_108480195_108480275_108485431_108485530_108488322
ENSMUST00000056328.6	chr9	-	2724	1	FSM	ENSMUSG00000053128.16	ENSMUST00000056328.6	2724	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCCTTGGGAGTGGT	9262	False	NA	NA	False	AATAAA	-20	NA	44024801	44022077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44022100_44024800
ENSMUST00000056355.9	chr5	+	3045	3	FSM	ENSMUSG00000048142.10	ENSMUST00000056355.9	6529	3	627	2857	627	2216	multi-exon	FALSE	canonical	2	3	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACAGTTGTGCCTTTTTT	NA	False	NA	1	True	NA	NA	NA	34153954	34160403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34154555_34155712_34155878_34158123
ENSMUST00000056365.9	chr5	+	4091	20	FSM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	7.49034466215639	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAAGAGTGGACCTCAT	8842	False	NA	3	True	CATAAA	-19	NA	37495842	37582399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ENSMUST00000056370.13	chr3	-	1007	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	377.05205210952	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	False	NA	-6	True	AATAAA	-16	NA	88317638	88301449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
ENSMUST00000056376.12	chr2	-	2394	11	FSM	ENSMUSG00000026836.16	ENSMUST00000056376.12	2394	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	11.677328461596	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCAGCAATATCGGCTG	NA	False	NA	NA	False	NA	NA	NA	58457169	58337160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58427789_58427886_58456798
ENSMUST00000056391.15	chr19	+	2975	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	26.9153766460735	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	614	False	NA	21	True	GATAAA	-21	NA	6385068	6390919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000056396.7	chr19	+	633	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAAGTTCGTGCTTTCTG	NA	False	NA	NA	False	AAAAAG	-26	NA	23653211	23653844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_23653200_23653800
ENSMUST00000056398.11	chr6	+	807	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	968	junction_1	14.522013940528	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	1	True	NA	17	True	AATAAA	-17	NA	18848577	18854052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
ENSMUST00000056403.7	chr6	-	1217	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTCGTTGTCTTGTGG	6909	False	NA	-2	True	AATAAA	-16	NA	87958619	87957402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87957400_87958600
ENSMUST00000056406.7	chr2	-	4107	2	FSM	ENSMUSG00000050592.9	ENSMUST00000056406.7	4107	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGCTCTGGTGGCAAT	NA	False	NA	NA	False	AATAAA	-35	NA	31973795	31956878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_31959786_31972595
ENSMUST00000056410.11	chrX	+	1862	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.1529071070248	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTGGATTTGATCTAC	NA	False	NA	NA	False	NA	NA	NA	164953449	164973508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
ENSMUST00000056427.10	chr13	-	1610	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	19.2006944318862	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCTTTTCTCTTCAACA	NA	False	NA	NA	False	AATAAA	-22	NA	34261990	34258256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
ENSMUST00000056433.7	chr2	+	6134	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	0	0	0	0	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTAGCCCCACCTGGC	NA	False	NA	15	True	ATTAAA	-30	NA	31042327	31108787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ENSMUST00000056433.7-0	chr2	+	3875	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	35	2224	0	1985	multi-exon	FALSE	canonical	1	139	junction_14	88.5769073297929	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTGTTCAACTCTGAAT	NA	False	NA	21	True	AATAAA	-34	NA	31042362	31106563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ENSMUST00000056449.9	chr1	+	4494	12	FSM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.0123897167112	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTATGTACTTTGTCTT	2492	False	NA	NA	False	AATAAA	-28	NA	171216521	171237808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171216932_171225042_171225146_171228123_171228269_171229492_171229576_171229724_171229833_171230780_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
ENSMUST00000056458.14	chr4	-	757	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	0	0	0	0	multi-exon	TRUE	canonical	2	32	junction_8	169.629516415942	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTGTAGTTACTATT	9644	False	NA	-3	True	AATAAA	-19	NA	119177681	119157206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUST00000056470.10	chr13	-	1466	4	FSM	ENSMUSG00000055560.9	ENSMUST00000056470.10	3334	4	19	1849	0	906	multi-exon	FALSE	canonical	3	28	junction_1	6.23609564462324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGTGTGATAAAGCCT	NA	False	NA	-24	True	NA	NA	NA	67569518	67555676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67556862_67561226_67561323_67561952_67562080_67569460
ENSMUST00000056482.14	chr16	+	5364	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAACGTCTCTGTGTT	NA	False	NA	9	True	ATTAAA	-19	NA	91526258	91668543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ENSMUST00000056482.14-0	chr16	+	4298	29	FSM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-18	1084	0	74	multi-exon	FALSE	canonical	3	117	junction_18	26.3675937468704	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTGCTATTTTGGTTT	NA	False	NA	15	True	AATAAA	-14	NA	91526240	91667459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ENSMUST00000056484.10	chr11	-	5003	7	FSM	ENSMUSG00000051790.16	ENSMUST00000056484.10	5003	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.14907393794853	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTCTCCTGTCGT	9889	False	NA	-2	True	TATAAA	-14	NA	69725675	69713947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69721388_69721440_69724807
ENSMUST00000056495.14	chr2	+	4318	24	FSM	ENSMUSG00000027478.16	ENSMUST00000056495.14	4318	24	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	26.7017412684545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	False	NA	22	True	ATTAAA	-14	NA	153491373	153529646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ENSMUST00000056502.7	chrX	-	5211	4	FSM	ENSMUSG00000046449.16	ENSMUST00000056502.7	5211	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	9.03081145609604	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAGAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	103244750	103127319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_103131837_103132486_103132613_103143231_103143288_103244238
ENSMUST00000056508.12	chr8	-	5684	12	FSM	ENSMUSG00000004319.16	ENSMUST00000056508.12	5684	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	67.8276863922271	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61408267	61363422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61407576
ENSMUST00000056512.14	chr13	+	3063	13	FSM	ENSMUSG00000042015.18	ENSMUST00000056512.14	3063	13	0	0	0	0	multi-exon	FALSE	non_canonical	3	44	junction_4	8.57807282163851	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGGGTTTGTTTTTTT	NA	False	NA	16	True	AATATA	-17	NA	95112855	95159822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133696_95136373_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ENSMUST00000056521.12	chr16	+	2394	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	4.9152822909778	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTCAAGATATTTG	NA	False	NA	NA	False	NA	NA	NA	13804467	13919364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
ENSMUST00000056521.12-0	chr16	+	1836	6	FSM	ENSMUSG00000044117.13	ENSMUST00000056521.12	2394	6	53	505	0	-505	multi-exon	FALSE	canonical	3	47	junction_1	4.9152822909778	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACATCTTATATGTTCT	NA	False	NA	4	True	AATAAA	-14	NA	13804520	13918859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13804758_13867246_13867371_13906809_13906884_13911752_13911868_13913767_13913851_13917656
ENSMUST00000056549.9	chr7	+	3373	4	FSM	ENSMUSG00000047603.10	ENSMUST00000056549.9	3373	4	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_3	6.18241233033047	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTCTCATCCTTT	NA	False	NA	6	True	AATAAA	-14	NA	23833666	23842666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23839724
ENSMUST00000056567.6	chr4	+	4583	29	FSM	ENSMUSG00000039577.18	ENSMUST00000056567.6	4583	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	7.49583217528247	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATTATGTTTTTCTTA	NA	False	NA	NA	False	TATAAA	-13	NA	152568826	152647504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ENSMUST00000056578.7	chr5	+	955	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	16.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTGCAGTCAAGGTAAG	1629	False	NA	3	True	ATTAAA	-16	NA	144192043	144201384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_144192330_144192619_144192723_144200818
ENSMUST00000056578.7-0	chr5	+	776	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	0	179	0	0	multi-exon	FALSE	canonical	3	246	junction_1	16.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTAGCTTGTTCTGCTC	1629	False	NA	0	True	AATAAA	-15	NA	144192043	144201205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_144192330_144192619_144192723_144200818
ENSMUST00000056601.11	chr11	-	2833	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	13.2142642642469	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCATCCCTGAAGCTGG	NA	False	NA	68	True	ATTAAA	-16	NA	76070473	75937051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
ENSMUST00000056635.13	chr4	-	6242	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTACTCATAGAGTCT	6464	False	NA	-1	True	AATAAA	-18	NA	121072281	121003079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ENSMUST00000056635.13-0	chr4	-	6003	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	0	239	0	-239	multi-exon	FALSE	canonical	3	142	junction_1	23.3290569453457	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTTTGGTGCTAAT	6464	False	NA	-2	True	NA	NA	NA	121072281	121003318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ENSMUST00000056641.15	chr2	+	4748	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGCTCGGGAACATTTT	NA	False	NA	NA	False	NA	NA	NA	24275343	24298741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ENSMUST00000056641.15-0	chr2	+	3500	17	FSM	ENSMUSG00000026979.17	ENSMUST00000056641.15	4748	17	0	1248	0	474	multi-exon	FALSE	canonical	2	7	junction_1	5.02338282435253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTCCACTTGCGGAATT	NA	False	NA	NA	False	NA	NA	NA	24275343	24297493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_24275475_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ENSMUST00000056649.13	chr11	-	2847	7	FSM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	62.4357447478784	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTGTTTTTATTAC	NA	False	NA	0	True	AAGAAA	-25	NA	5015327	5010371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836_5015095_5015214
ENSMUST00000056654.8	chr5	+	2368	4	FSM	ENSMUSG00000044134.10	ENSMUST00000056654.8	2368	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	9.62635271879577	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGCTGGGTGTATTA	5424	False	NA	-1	True	AATAAA	-10	NA	121987057	121992662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121987188_121988532_121988610_121989230_121989343_121990613
ENSMUST00000056660.13	chr12	-	3860	3	FSM	ENSMUSG00000046157.14	ENSMUST00000056660.13	3860	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTGGCTGTGACCCAT	NA	False	NA	-6	True	CATAAA	-21	NA	79054051	79008573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79011948_79024534_79024716_79053746
ENSMUST00000056665.4	chr11	-	2393	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTCTAGTTACTTGGCC	7694	False	NA	-8	True	ATTAAA	-16	NA	100363567	100353439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100355272_100363006
ENSMUST00000056677.8	chr11	+	1591	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGGGTATTCTTTTTT	NA	False	NA	NA	False	CATAAA	-21	NA	82655170	82656761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_82655200_82656800
ENSMUST00000056683.3	chr7	-	3380	2	FSM	ENSMUSG00000087598.10	ENSMUST00000056683.3	3380	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGGTGTTGTCTGAT	NA	False	NA	NA	False	NA	NA	NA	23903008	23896301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_23899468_23902794
ENSMUST00000056710.10	chr3	+	1601	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	85.2670641116617	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGGACTTTATAAT	NA	False	NA	-20	True	NA	NA	NA	95801366	95804757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUST00000056732.4	chr2	-	3362	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTTCCTACTAATCTT	9195	False	NA	NA	False	NA	NA	NA	121304548	121290715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ENSMUST00000056732.4-0	chr2	-	2636	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	0	726	0	-726	multi-exon	FALSE	canonical	3	438	junction_3	20.2457128520803	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCATGCAGTTCTTGAAG	9195	False	NA	-9	True	AATAAA	-13	NA	121304548	121291441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ENSMUST00000056749.14	chr3	-	5047	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	5.77350269189626	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGCTTTATTCATTT	NA	False	NA	NA	False	AATAAA	-17	NA	53370753	53356003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
ENSMUST00000056760.4	chr2	-	3334	3	FSM	ENSMUSG00000051379.13	ENSMUST00000056760.4	3334	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	29	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATACA	-5	NA	140513320	140501244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_140503672_140504627_140505380_140513165
ENSMUST00000056781.5	chr11	-	3403	19	FSM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	6.51399253648882	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGTCTTGTCCTACT	1471	False	NA	2	True	ATTAAA	-28	NA	120823698	120717354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120717751_120751226_120751453_120751963_120752096_120757380_120757503_120764411_120764626_120769703_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
ENSMUST00000056820.13	chr7	-	1555	12	FSM	ENSMUSG00000003269.18	ENSMUST00000056820.13	2527	12	0	972	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	132.289502216518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATTATTTAATCCCTT	3157	False	NA	NA	False	NA	NA	NA	45463740	45457032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457877_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ENSMUST00000056888.13	chr19	-	2139	15	FSM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.70128076340124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGCTGTCCTGCGTGGT	860	False	NA	-5	True	AATAAA	-17	NA	4333163	4320207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
ENSMUST00000056889.15	chr6	+	6697	39	FSM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_8	108.606041087339	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1608	False	NA	14	True	AATAAA	-18	NA	125072943	125107554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUST00000056904.3	chrX	-	5302	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCCGGTTTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	101200697	101185321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101190440_101200513
ENSMUST00000056904.3-0	chrX	-	4061	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	0	1241	0	-1241	multi-exon	FALSE	canonical	3	249	junction_1	0	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTTTCCATTCATTTTC	NA	False	NA	-3	True	ATTAAA	-15	NA	101200697	101186562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101190440_101200513
ENSMUST00000056907.7	chr11	+	7391	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGTTCCTAATTGTAGG	NA	False	NA	13	True	AATAAA	-21	NA	60668350	60679113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60671208_60674579
ENSMUST00000056919.9	chr8	-	1895	12	FSM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	0	1878	0	0	multi-exon	FALSE	canonical	3	171	junction_1	43.8225195891393	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATGGAGCGTATTTA	NA	False	NA	-6	True	AATAAA	-13	NA	96215455	96174601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ENSMUST00000056924.14	chr2	-	5485	3	FSM	ENSMUSG00000051413.18	ENSMUST00000056924.14	5485	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGAACTTGTTTATTT	7304	False	NA	1	True	ATTAAA	-24	NA	153083346	153069678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_153074640_153077719_153078093_153083195
ENSMUST00000056931.14	chr19	-	2295	11	FSM	ENSMUSG00000025223.16	ENSMUST00000056931.14	2295	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	244.379806858095	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACTCATGTTCCCCTAT	8088	False	NA	-31	True	ATTAAA	-20	NA	46028060	46021032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
ENSMUST00000056937.12	chr5	-	804	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	42.8691030930203	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTAATTGGAAATAGATAT	NA	False	NA	3	True	AATAAA	-24	NA	110987643	110976935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
ENSMUST00000056948.10	chr6	-	537	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGTCTGAGACTGGG	NA	False	NA	NA	False	TATAAA	-38	NA	48502024	48501487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_48501500_48502000
ENSMUST00000056949.5	chr9	-	1520	2	FSM	ENSMUSG00000046846.5	ENSMUST00000056949.5	3042	2	0	1522	0	-1522	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCTGTAGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	62189490	62179532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_62180846_62189283
ENSMUST00000056950.14	chr12	+	3892	10	FSM	ENSMUSG00000044456.17	ENSMUST00000056950.14	3892	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.36225462505214	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAAGGAGCCAGAGT	NA	False	NA	NA	False	AATAAA	-22	NA	102249306	102357114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_102249586_102279233_102279442_102292053_102292172_102317140_102317214_102324963_102325056_102334622_102336108_102339828_102340138_102348811_102348944_102353812_102353977_102356082
ENSMUST00000056965.12	chr4	-	1163	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	262.901958912443	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236516	148230244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
ENSMUST00000056972.6	chr8	+	3545	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	0	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTGTGTTTGTTTCA	3640	False	NA	NA	False	AATAAA	-13	NA	110944620	110951118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110944719_110947671
ENSMUST00000056974.4	chr10	-	2889	4	FSM	ENSMUSG00000048756.12	ENSMUST00000056974.4	2889	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	60.8604962188118	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACTTAACACATTGCATA	NA	False	NA	NA	False	NA	NA	NA	42152738	42061781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_42062292_42072461_42073898_42150811_42151538_42152521
ENSMUST00000056978.8	chr13	-	6866	38	FSM	ENSMUSG00000021375.12	ENSMUST00000056978.8	6866	38	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	15.6289144110642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGATCGTCTGTTCTTT	NA	False	NA	2	True	AATACA	-24	NA	47083194	46902562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_46904103_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47018294_47018308_47082691_47082783_47083042
ENSMUST00000056997.15	chr14	-	2202	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	34.1362556619393	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACAAATAAAATGTTA	NA	False	NA	-32	True	NA	NA	NA	59835393	59801424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUST00000057000.17	chr12	+	3046	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_9	361.05984686441	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGTCTGTGTTTAATA	NA	False	NA	NA	False	AATAAA	-10	NA	98713241	98754006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUST00000057000.17-0	chr12	+	2141	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	6	899	0	0	multi-exon	FALSE	canonical	3	91	junction_9	361.05984686441	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713247	98753107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUST00000057015.8	chr14	-	8132	25	FSM	ENSMUSG00000021733.12	ENSMUST00000057015.8	8132	25	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_19	12.4782449576141	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTTGGCTGTTGTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	7767484	7669822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ENSMUST00000057028.15	chr8	+	4450	17	FSM	ENSMUSG00000044433.17	ENSMUST00000057028.15	4450	17	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_7	31.8251448347058	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTACGTCTCGTGTT	6153	False	NA	53	True	NA	NA	NA	3637292	3659075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ENSMUST00000057029.5	chr17	-	2139	6	FSM	ENSMUSG00000062012.15	ENSMUST00000057029.5	2139	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	37.585103432078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGCCCTTGGCTCTG	NA	False	NA	-8	True	ATTAAA	-13	NA	23818461	23794825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800051_23800245_23804411_23804549_23818125
ENSMUST00000057038.4	chr19	+	906	1	FSM	ENSMUSG00000044065.4	ENSMUST00000057038.4	906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATTTTACTCTGATCT	NA	False	NA	NA	False	AAGAAA	-31	NA	41448251	41449157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_41448300_41449200
ENSMUST00000057043.10	chr4	-	1499	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	264	4668	0	447	multi-exon	FALSE	canonical	3	63	junction_1	11	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACAAGAGGCATAGTTT	NA	False	NA	NA	False	AATAAA	-12	NA	107035480	106996019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
ENSMUST00000057062.12	chr1	-	3430	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	13.1918030852137	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGCTGGATTTATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	183078536	183057915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
ENSMUST00000057067.10	chr9	+	2670	5	FSM	ENSMUSG00000043289.13	ENSMUST00000057067.10	2670	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAATAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	81745722	81909079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
ENSMUST00000057067.10-0	chr9	+	2063	5	FSM	ENSMUSG00000043289.13	ENSMUST00000057067.10	2670	5	39	568	0	0	multi-exon	FALSE	canonical	3	28	junction_2	8.4372685153431	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTACTGGTTGAATTTT	NA	False	NA	NA	False	AATAAA	-18	NA	81745761	81908511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_81745971_81772174_81772421_81809150_81809687_81861178_81861311_81907571
ENSMUST00000057089.13	chr11	+	3118	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	67.6576348652209	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6452	False	NA	14	True	ATTAAA	-16	NA	3240438	3259083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
ENSMUST00000057093.8	chrX	-	3264	3	FSM	ENSMUSG00000044149.8	ENSMUST00000057093.8	3264	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	0.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTGCTGTAATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	36166552	36151196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36154166_36155277_36155409_36166388
ENSMUST00000057110.11	chr18	-	2379	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	487	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGTACAGGCGTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	43610861	43608482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_43608500_43610900
ENSMUST00000057135.14	chr2	-	5200	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-29	5895	0	-5895	multi-exon	FALSE	canonical	3	11	junction_14	10.4060422008425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGTTTTCTTTCAATG	NA	False	NA	NA	False	AATAAA	-8	NA	120680916	120569191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ENSMUST00000057151.10	chr12	+	2971	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	9.17877987534291	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30634424	30641214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ENSMUST00000057169.5	chr2	-	3547	4	FSM	ENSMUSG00000050700.12	ENSMUST00000057169.5	3547	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5.55777733351102	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAAGGTGTTTTCTTCACT	NA	False	NA	NA	False	ATTAAA	-14	NA	160754248	160748357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_160751237_160751526_160751751_160752661_160752785_160753927
ENSMUST00000057177.7	chr15	+	601	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	282.916948944385	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTATTCAATGTCTT	132	False	NA	NA	False	ATTAAA	-15	NA	36174178	36177156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
ENSMUST00000057180.13	chrX	+	3251	11	FSM	ENSMUSG00000044150.13	ENSMUST00000057180.13	2513	11	-51	-687	0	0	multi-exon	FALSE	canonical	3	43	junction_8	176.193756983612	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158350914_158351011_158357940_158358094_158375066
ENSMUST00000057190.4	chr17	-	3223	1	FSM	ENSMUSG00000046173.4	ENSMUST00000057190.4	3223	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGTGGTTCACTT	NA	False	NA	NA	False	AATAAA	-40	NA	9888646	9885423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_9885400_9888600
ENSMUST00000057194.9	chr11	-	1984	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	14.7044966667419	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGACTGTGCTTTATTAG	5470	False	NA	-2	True	AATACA	-17	NA	62539349	62495709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
ENSMUST00000057195.17	chr7	+	2722	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_1	0	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTGAGTATGGGTAG	75	False	NA	21	True	AATAAA	-21	NA	44465511	44480236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44465908_44477910
ENSMUST00000057208.13	chr1	+	1418	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_3	42.3685024517034	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890392	42944842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUST00000057209.12	chr5	-	4339	16	FSM	ENSMUSG00000042216.14	ENSMUST00000057209.12	4339	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	17.3674024156368	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAACCGTGGGTCTG	NA	False	NA	-9	True	AATATA	-10	NA	113428467	113391094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
ENSMUST00000057256.5	chr15	-	3728	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	0	238	0	231	multi-exon	FALSE	canonical	3	264	junction_8	28.8809517675578	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	12824735	12808500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ENSMUST00000057257.10	chr12	+	1292	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCCCGAAAAGTATT	NA	False	NA	NA	False	TATAAA	-27	NA	72132630	72147635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUST00000057257.10-0	chr12	+	1801	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	91	-600	91	0	multi-exon	FALSE	canonical	3	493	junction_1	87.1563091360701	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132721	72148235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUST00000057258.11	chr5	-	6804	4	FSM	ENSMUSG00000046572.11	ENSMUST00000057258.11	6804	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	106.871677986057	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	-5	True	AATAAA	-16	NA	38842093	38825828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38832197_38839827_38840126_38840535_38840602_38842021
ENSMUST00000057283.8	chr6	-	3677	20	FSM	ENSMUSG00000041372.11	ENSMUST00000057283.8	3677	20	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	11.9409906464132	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAGAAATGCCCCTT	NA	False	NA	NA	False	NA	NA	NA	120271520	120180054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ENSMUST00000057288.7	chr12	+	2175	13	FSM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGTGATTATCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	17316545	17334771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUST00000057288.7-0	chr12	+	1720	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	0	405	0	-405	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAATGCTGATAAATGTA	NA	False	NA	9	True	AATAAA	-11	NA	17316595	17334366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUST00000057311.4	chr4	-	1613	1	FSM	ENSMUSG00000047281.4	ENSMUST00000057311.4	1613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCTTCAGTTATTGGC	9829	False	NA	-10	True	AATAAA	-18	NA	133329479	133327866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133327900_133329500
ENSMUST00000057325.15	chr13	+	2413	12	FSM	ENSMUSG00000048924.15	ENSMUST00000057325.15	2413	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.01073228346206	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTTTCAATGTCTCTT	NA	False	NA	5	True	TATAAA	-18	NA	100806280	100833748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_100806360_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
ENSMUST00000057330.15	chr11	+	4191	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	18	-1919	0	1057	multi-exon	FALSE	canonical	2	5	junction_9	19.4950915296646	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCAGGTGGACATTGTTC	937	False	NA	3	True	ATTAAA	-19	NA	53458223	53493851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ENSMUST00000057341.6	chr10	+	1062	3	FSM	ENSMUSG00000050844.6	ENSMUST00000057341.6	1062	3	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGGACTCTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	21469043	21498275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21469134_21469230_21469472_21497544
ENSMUST00000057373.14	chr17	-	1770	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	224	4115	0	151	multi-exon	FALSE	canonical	3	562	junction_1	25.4411084664171	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCAGCTTCTGTCTT	NA	False	NA	-8	True	ACTAAA	-29	NA	33979280	33965572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ENSMUST00000057410.14	chr15	+	3659	17	FSM	ENSMUSG00000006369.15	ENSMUST00000057410.14	3659	17	0	0	0	0	multi-exon	TRUE	canonical	3	136	junction_16	137.738202761616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGACGTTTTTATCATT	NA	False	NA	NA	False	AATAAA	-13	NA	85090149	85170736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ENSMUST00000057410.14-0	chr15	+	2756	17	FSM	ENSMUSG00000006369.15	ENSMUST00000057410.14	3659	17	56	847	0	-847	multi-exon	FALSE	canonical	3	136	junction_16	137.738202761616	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGATTGCAATTTTGT	NA	False	NA	55	True	AATAAA	-45	NA	85090205	85169889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ENSMUST00000057416.8	chr12	+	1207	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	0	2160	0	-2160	multi-exon	FALSE	canonical	3	165	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTTGCTTGCTTTAA	NA	False	NA	1	True	CATAAA	-16	NA	102710020	102711660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_102710426_102710858
ENSMUST00000057421.15	chr6	-	1584	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	149.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCTCGTGCCCATCTA	474	False	NA	-7	True	AATAAA	-41	NA	128339831	128334322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128335157_128336068_128336318_128339330
ENSMUST00000057423.6	chr2	+	1947	2	FSM	ENSMUSG00000051373.6	ENSMUST00000057423.6	1947	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCCTGTGTGGTTCTTA	NA	False	NA	NA	False	AATACA	-22	NA	31985539	32000832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31986275_31999620
ENSMUST00000057438.7	chr1	-	9749	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCATTGATTTTTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	9818607	9788846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_9795576_9807190_9807278_9815674
ENSMUST00000057438.7-0	chr1	-	5179	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	0	4570	0	-4570	multi-exon	FALSE	canonical	3	96	junction_2	5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCCTGTTCATTCGAA	NA	False	NA	NA	False	AATACA	-21	NA	9818607	9793416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_9795576_9807190_9807278_9815674
ENSMUST00000057486.9	chr15	-	2509	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	35.6195171219375	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCATCGGCCATTTTCTTA	NA	False	NA	NA	False	AATAAA	-18	NA	36496966	36477813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
ENSMUST00000057495.10	chr13	+	2857	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	57.0470300398157	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATACAATAAGAG	NA	False	NA	NA	False	NA	NA	NA	84370418	84444260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ENSMUST00000057497.13	chr5	-	2724	13	FSM	ENSMUSG00000004415.16	ENSMUST00000057497.13	2724	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.3360653902262	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTCTGTGGCTTGTCAG	NA	False	NA	0	True	AATAAA	-19	NA	136911975	136770612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136772061_136773016_136773102_136775874_136775923_136777177_136777214_136778118_136778172_136780522_136780607_136783046_136783200_136783768_136783868_136786485_136786643_136794155_136794218_136865507_136865612_136876337_136876461_136911703
ENSMUST00000057500.6	chr9	-	1232	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	0	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	10	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTCTTTATTTGGCGGT	3713	False	NA	0	True	ATTAAA	-35	NA	96360728	96352989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96353906_96356010_96356059_96360460
ENSMUST00000057540.6	chr6	-	2375	2	FSM	ENSMUSG00000059878.13	ENSMUST00000057540.6	2375	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGGAAATTGTTTGCA	NA	False	NA	13	True	AATAAA	-36	NA	116605883	116601864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_116604095_116605738
ENSMUST00000057551.14	chr5	-	1906	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	44.1837535937436	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809918	33797398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUST00000057557.14	chr7	-	4237	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	0	0	0	0	multi-exon	TRUE	canonical	3	440	junction_10	48.8278608992858	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACAGCATTCAGTTTTT	3862	False	NA	NA	False	NA	NA	NA	128342219	128298164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ENSMUST00000057557.14-1	chr7	-	2911	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	0	1326	0	0	multi-exon	FALSE	canonical	3	440	junction_10	48.8278608992858	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATTGTCCTTAACTTT	3862	False	NA	-14	True	NA	NA	NA	128342219	128299490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ENSMUST00000057561.9	chr8	-	4080	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	0	4598	0	-4598	multi-exon	FALSE	canonical	3	189	junction_17	22.8505746170765	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTCATCAGGTTTA	NA	False	NA	-16	True	AATATA	-29	NA	48443586	48281591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ENSMUST00000057576.8	chr7	-	2902	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_8	14.1585607937389	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGTGTTTCCTTCTTCT	8924	False	NA	0	True	AATAAA	-17	NA	121580934	121522061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ENSMUST00000057578.16	chr6	+	2283	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	132.149477392081	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746126	106759435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUST00000057580.8	chr4	+	1003	5	FSM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	19.0656759649376	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGCCTCTGACTATGG	NA	False	NA	16	True	AATAAA	-22	NA	148533081	148539430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008
ENSMUST00000057598.7	chr13	+	3957	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGCTTTTTATAGAACA	NA	False	NA	NA	False	ATTAAA	-25	NA	81859459	81901394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81860102_81898079
ENSMUST00000057598.7-0	chr13	+	1085	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	115	2757	-74	172	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAACCCAGAGTCTTAG	NA	False	NA	NA	False	NA	NA	NA	81859574	81898637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81860102_81898079
ENSMUST00000057623.14	chr10	-	3531	12	FSM	ENSMUSG00000062075.14	ENSMUST00000057623.14	3531	12	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGC	3111	False	NA	NA	False	NA	NA	NA	80754079	80737036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ENSMUST00000057625.3	chrX	+	1580	1	FSM	ENSMUSG00000048355.3	ENSMUST00000057625.3	1580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTTGCTTCCTTTAT	NA	False	NA	22	True	AATAGA	-16	NA	134934115	134935695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134934100_134935700
ENSMUST00000057627.16	chr2	-	4012	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCGAAGATTTTTTTC	4582	False	NA	NA	False	ATTAAA	-17	NA	167334807	167323052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167326500_167327077_167327514_167334678
ENSMUST00000057627.16-0	chr2	-	3697	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	15	300	0	0	multi-exon	FALSE	canonical	3	52	junction_2	1	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATAAAGTGT	4597	False	NA	NA	False	NA	NA	NA	167334792	167323352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167326500_167327077_167327514_167334678
ENSMUST00000057631.12	chr11	-	4743	23	FSM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_12	13.4016928744404	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGATGGCTATTTG	NA	False	NA	-3	True	AATAAA	-19	NA	74787886	74740086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ENSMUST00000057649.8	chr10	+	563	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGGTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	43400079	43400642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_43400100_43400600
ENSMUST00000057652.7	chr7	+	2744	3	FSM	ENSMUSG00000058402.15	ENSMUST00000057652.7	2744	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	17.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAATGTGTAGTTTTGTG	NA	False	NA	NA	False	GATAAA	-19	NA	29559465	29576252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29559519_29572316_29572359_29573603
ENSMUST00000057659.14	chr10	+	6547	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_12	11.5498381084143	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGACTACTGTTCTT	NA	False	NA	12	True	ATTAAA	-22	NA	58091318	58141421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ENSMUST00000057669.16	chr7	+	1800	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_5	18.155147341732	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCTGTCTGTGTAT	5216	False	NA	31	True	TATAAA	-24	NA	126358772	126364991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUST00000057676.7	chr11	+	1482	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	0	0	0	0	multi-exon	TRUE	canonical	3	1535	junction_2	51	1047	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTTTTTGTTTTTGC	NA	False	NA	36	True	TTTAAA	-29	NA	116324919	116329903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116325255_116325384_116325448_116328819
ENSMUST00000057692.11	chr6	+	2702	10	FSM	ENSMUSG00000029823.17	ENSMUST00000057692.11	2702	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	33.3603594142346	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCTAGTAGTTAACAAAC	NA	False	NA	4	True	ATTAAA	-19	NA	38528399	38586405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ENSMUST00000057717.8	chr8	-	4390	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	-283	3125	-283	-3125	multi-exon	FALSE	canonical	3	26	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACAGCTCTTCCACTCG	NA	False	NA	-6	True	AGTAAA	-17	NA	96058861	96052763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96056441_96058148
ENSMUST00000057725.10	chr2	-	3926	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTCTCGAGTTACTG	NA	False	NA	-5	True	ATTAAA	-18	NA	156977185	156939452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUST00000057725.10-0	chr2	-	1913	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	145	1868	0	0	multi-exon	FALSE	canonical	3	122	junction_1	26.3435423248701	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAATATCTGCGGTTAG	NA	False	NA	-5	True	AGTAAA	-18	NA	156977040	156941320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUST00000057740.7	chr3	-	885	1	FSM	ENSMUSG00000047676.7	ENSMUST00000057740.7	885	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1363	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGCTGTGCAGGTGCC	NA	False	NA	NA	False	NA	NA	NA	149779179	149778294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_149778300_149779200
ENSMUST00000057773.5	chr5	+	1308	1	FSM	ENSMUSG00000049285.5	ENSMUST00000057773.5	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCCTGATGTAAATGC	5031	False	NA	NA	False	AATAAA	-17	NA	138192575	138193883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138192600_138193900
ENSMUST00000057792.9	chr6	-	1806	9	FSM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	125	478	0	-478	multi-exon	FALSE	canonical	2	9	junction_7	2.57087047515039	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATTTGTTTGTTTGTTT	9	True	NA	NA	False	AATAAA	-27	NA	5298330	5264624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5289012_5289084_5298211
ENSMUST00000057793.11	chr2	-	4917	5	FSM	ENSMUSG00000051149.16	ENSMUST00000057793.11	4917	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	74.0249113474647	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	3107	False	NA	-1	True	AATAAA	-25	NA	168048842	168022905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168046519_168046695_168048493
ENSMUST00000057795.12	chr5	-	2270	11	FSM	ENSMUSG00000029422.16	ENSMUST00000057795.12	2270	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	167.947640650293	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTCCATTGTATGCTAT	4323	False	NA	NA	False	AATAAA	-11	NA	123887475	123866492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ENSMUST00000057798.9	chr10	+	2106	11	FSM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	25.7441255435099	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGAGGGCTTGTGG	1320	False	NA	28	True	TATAAA	-31	NA	81104005	81109080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ENSMUST00000057799.8	chr11	-	2810	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	0	602	0	-602	multi-exon	FALSE	canonical	2	7	junction_3	2.86744175568088	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCCCTGTCTGTAGCTA	NA	False	NA	NA	False	AATAAA	-19	NA	59363300	59352624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
ENSMUST00000057829.4	chr4	-	2114	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	0	0	0	0	multi-exon	FALSE	canonical	3	1281	junction_1	0	742	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTTTAAAGTGTTATT	NA	False	NA	0	True	AATAAA	-21	NA	49521093	49512595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_49514578_49520961
ENSMUST00000057844.10	chr13	+	4652	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	0	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55840936	55851313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55841161_55846885
ENSMUST00000057849.6	chr11	-	1473	2	FSM	ENSMUSG00000045532.6	ENSMUST00000057849.6	1473	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATTTCAGTCTGTGCC	8659	False	NA	-10	True	AATAAA	-16	NA	102837514	102830089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102830739_102836690
ENSMUST00000057855.4	chr8	-	2497	14	FSM	ENSMUSG00000043251.7	ENSMUST00000057855.4	2497	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	7.19467258528611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGAATCTATGTGTTG	NA	False	NA	-1	True	AATAAA	-15	NA	106022730	106016555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257_106022339_106022537
ENSMUST00000057859.9	chr12	+	4662	14	FSM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	41.9310507589719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	787	False	NA	NA	False	AATAAA	-21	NA	70872287	70949008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUST00000057884.6	chr11	+	1220	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_9	31.9443961352292	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4233	False	NA	12	True	AATAAA	-22	NA	69805017	69807417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUST00000057885.13	chr5	-	738	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	0	0	0	0	multi-exon	FALSE	canonical	3	5084	junction_7	3201.89202994551	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548787	65545706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ENSMUST00000057896.5	chr15	-	6604	8	FSM	ENSMUSG00000036197.17	ENSMUST00000057896.5	1891	8	0	-4713	0	0	multi-exon	FALSE	canonical	3	19	junction_7	17.2827624398133	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTCTAAATTTTTTT	NA	False	NA	-10	True	AATAAA	-13	NA	93173032	93137622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93163751_93163845_93172756
ENSMUST00000057910.16	chr10	-	5250	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAAGCCCAGGTCTGT	9421	False	NA	NA	False	AATAAA	-14	NA	80397394	80376758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ENSMUST00000057910.16-0	chr10	-	4511	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	0	739	0	0	multi-exon	FALSE	canonical	3	315	junction_13	35.2049393566022	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ENSMUST00000057921.10	chr11	+	2242	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	7.43303437365925	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCATGTTCTCCTGGA	NA	False	NA	31	True	AATAAA	-20	NA	103857564	103876163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
ENSMUST00000057934.10	chr8	+	2180	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	0	558	0	103	multi-exon	FALSE	canonical	3	157	junction_17	92.4052680533628	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGTCTTTTGTTTTCCC	NA	False	NA	26	True	NA	NA	NA	124100562	124128073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ENSMUST00000057935.9	chr3	-	3577	4	FSM	ENSMUSG00000050144.14	ENSMUST00000057935.9	3577	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	3.85861230093008	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTCTGGCTTTTGGGTT	4066	False	NA	-4	True	ATTAAA	-18	NA	88332446	88317805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332034
ENSMUST00000057944.12	chr3	-	3740	6	FSM	ENSMUSG00000032854.13	ENSMUST00000057944.12	3740	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.44093010681705	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCTCATTGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	125732268	125658919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286_125709111_125732101
ENSMUST00000057950.9	chr18	-	6367	4	FSM	ENSMUSG00000024565.11	ENSMUST00000057950.9	7079	4	91	621	91	-621	multi-exon	FALSE	canonical	3	26	junction_2	9.39266853573691	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGAATCGTGTTCCCTG	NA	False	NA	-6	True	AATAAA	-19	NA	81029895	81010211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_81013120_81014395_81014737_81014952_81017845_81029669
ENSMUST00000057975.8	chr3	+	2433	2	FSM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCCATTCTGTTTTTT	1251	False	NA	7	True	AATAAA	-19	NA	37366702	37375599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37366735_37373198
ENSMUST00000058011.8	chr6	-	3371	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	0	0	0	0	multi-exon	FALSE	canonical	1	1040	junction_8	575.928791894739	6850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875762	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ENSMUST00000058022.6	chr7	-	2993	25	FSM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.91860837364933	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTGGCCCTGTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	144837748	144807659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ENSMUST00000058022.6-0	chr7	-	2778	25	FSM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	80	135	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.91860837364933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTTTCTACTTC	NA	False	NA	1	True	TATAAA	-18	NA	144837668	144807794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ENSMUST00000058030.10	chr4	+	2797	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	29.2609651521041	446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCAGATTATACTTGA	5048	False	NA	NA	False	NA	NA	NA	89055358	89099318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ENSMUST00000058033.9	chr16	-	6362	22	FSM	ENSMUSG00000049076.13	ENSMUST00000058033.9	6362	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	34.9116149967028	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGCTGTAAGTGCTCC	NA	False	NA	-23	True	AATAAA	-18	NA	31019981	30911232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30973390_30973511_30979148_30979207_31019756
ENSMUST00000058041.12	chr9	-	3984	13	FSM	ENSMUSG00000046111.19	ENSMUST00000058041.12	3984	13	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	27.5691050916702	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCTTTGCTGTCCATC	NA	False	NA	-2	True	AATAAA	-15	NA	15244795	15228212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_15228410_15228754_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231
ENSMUST00000058060.14	chr11	-	1394	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	23.4141457717813	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGACGATCTTTCCC	NA	False	NA	-29	True	AATAAA	-22	NA	31621885	31615180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
ENSMUST00000058089.13	chr2	+	1747	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	14.5945195193264	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGCTTGTTTATTTTG	NA	False	NA	23	True	AATAAA	-33	NA	154633076	154709181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUST00000058096.14	chr5	+	4633	21	FSM	ENSMUSG00000057406.17	ENSMUST00000058096.14	4633	21	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	54.3759137854253	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTCCACTTTGAGTG	3698	False	NA	NA	False	NA	NA	NA	34000484	34053056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ENSMUST00000058098.15	chrX	-	4797	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	30.3809150619266	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	-5	True	AATAAA	-35	NA	156381711	156330819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ENSMUST00000058103.6	chr12	-	643	1	FSM	ENSMUSG00000042962.6	ENSMUST00000058103.6	643	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCACCCGTGTGAGC	NA	False	NA	NA	False	NA	NA	NA	84305747	84305104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84305100_84305700
ENSMUST00000058104.8-1	chr7	+	3308	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	0	1186	0	-1186	multi-exon	FALSE	canonical	3	26	junction_1	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTGGCTGGATAGTAA	7267	False	NA	1	True	NA	NA	NA	43229033	43241473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
ENSMUST00000058109.9-1	chr11	+	1287	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	0	675	0	360	multi-exon	TRUE	canonical	3	642	junction_4	47.0451910401053	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCAGTCTTCCATTCTG	NA	False	NA	5	True	NA	NA	NA	115494750	115498187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUST00000058119.9	chrX	+	1532	1	FSM	ENSMUSG00000048040.9	ENSMUST00000058119.9	1532	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTAGGTCCATTATTT	NA	False	NA	20	True	AATAAA	-17	NA	134894572	134896104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134894600_134896100
ENSMUST00000058125.9	chrX	-	866	3	FSM	ENSMUSG00000050071.9	ENSMUST00000058125.9	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	4595	junction_1	588.5	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTACTCATCTTTTC	NA	False	NA	-2	True	AATAAA	-17	NA	135116262	135114720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135115333_135115652_135115730_135116085
ENSMUST00000058135.6	chr12	+	1468	5	FSM	ENSMUSG00000047227.6	ENSMUST00000058135.6	1468	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.11737237261468	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGTACTTTTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	64964679	64971365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_64964966_64967578_64968104_64969098_64969189_64970280_64970416_64970933
ENSMUST00000058137.9	chr2	-	3230	15	FSM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_7	28.5093074669466	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3218	False	NA	-6	True	CATAAA	-15	NA	25498533	25473029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ENSMUST00000058154.15	chr10	-	5993	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	14.4496677957759	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGATTGTCTTGTGATGT	NA	False	NA	1	True	ATTAAA	-23	NA	100323212	100279763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
ENSMUST00000058162.14	chr11	-	4923	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	28	618	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTGGTATTTCTTTGAA	7358	False	NA	-1	True	AATAAA	-16	NA	120524426	120515942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120520563_120520643_120520708_120524187
ENSMUST00000058163.11	chr11	+	3559	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	15.9356404539699	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616006	23682876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUST00000058183.9	chr4	-	1082	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	119.468549731718	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGGTCTGAGTTTT	-19	True	NA	-3	True	TTTAAA	-3	NA	11076204	11051044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
ENSMUST00000058196.13	chr13	-	1139	5	FSM	ENSMUSG00000021384.15	ENSMUST00000058196.13	1418	5	140	139	0	0	multi-exon	FALSE	canonical	2	5	junction_4	5.02493781056044	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAGCCACCTTATCATC	NA	False	NA	4	True	AATAAA	-16	NA	49401630	49384304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_49384808_49390899_49391089_49392264_49392413_49393958_49394148_49401520
ENSMUST00000058210.13	chr6	-	4567	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTGAAAATTAGCAT	3998	False	NA	NA	False	AATAAA	-18	NA	137626283	137454242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ENSMUST00000058210.13-0	chr6	-	3635	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	0	932	0	0	multi-exon	FALSE	canonical	3	114	junction_13	15.9268452335348	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGCTTATTGTGTAAAA	3998	False	NA	-83	True	NA	NA	NA	137626283	137455174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ENSMUST00000058230.13	chr3	+	1130	4	FSM	ENSMUSG00000038619.13	ENSMUST00000058230.13	1130	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	204.491781959298	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACCAAAACTAGACCT	400	False	NA	10	True	AATAAA	-21	NA	95532321	95539413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95532488_95534059_95534186_95535851_95536019_95538742
ENSMUST00000058245.5	chr6	+	918	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	170.445005793658	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTGTGCTTTTCATGGC	NA	False	NA	NA	False	AATAAA	-16	NA	146479418	146494363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
ENSMUST00000058265.8	chrX	-	1449	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTATTACTTTTCTGT	NA	False	NA	-2	True	ATTAAA	-18	NA	37723964	37719661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_37721001_37723854
ENSMUST00000058295.6	chr11	+	5012	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_8	10.5841234232719	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTAATTACTCTTTA	9037	False	NA	NA	False	CATAAA	-20	NA	98303295	98328542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUST00000058333.10	chr7	+	694	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	126.499011853848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGCTTTCTTGTCT	NA	False	NA	NA	False	AATAAA	-11	NA	105289654	105291050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
ENSMUST00000058351.16	chr4	+	2371	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_5	14.102836594104	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTCGCTTTTATTC	NA	False	NA	16	True	ATTAAA	-19	NA	99786610	99844491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ENSMUST00000058370.14	chr11	+	2778	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	16.7164589551735	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGAGAACATTCTTGTT	208	False	NA	NA	False	AATAAA	-20	NA	120348940	120355184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
ENSMUST00000058383.9	chr6	-	3280	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	41	661	0	-661	multi-exon	FALSE	canonical	3	74	junction_4	4.71036092035419	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTTTTCCAGGTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	83808682	83783043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
ENSMUST00000058393.9	chr4	+	1098	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	42.5519290592879	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTTCACAAAAGTGT	NA	False	NA	NA	False	AATAAA	-29	NA	154041693	154046382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
ENSMUST00000058407.6	chr11	-	434	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	8152	junction_1	0	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTTTTGCACGAGTCCT	NA	False	NA	-6	True	AATAAA	-19	NA	4654342	4651972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4652221_4654156
ENSMUST00000058418.8	chr5	+	2789	11	FSM	ENSMUSG00000050822.12	ENSMUST00000058418.8	2789	11	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_7	3.13847096529504	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCTGTCCTGAGGAAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	142687855	142708245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142688047_142691110_142691291_142697717_142697850_142698641_142698756_142699765_142699895_142700800_142700876_142703346_142703592_142704211_142704354_142704465_142704654_142705711_142705953_142707093
ENSMUST00000058437.14	chr1	-	903	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	260	0	0	0	multi-exon	FALSE	canonical	3	5309	junction_1	773.772953348289	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGAGTCTTTGTTGG	NA	False	NA	-5	True	AATAAA	-25	NA	16174626	16171518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUST00000058438.9	chr11	+	5750	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_6	15.5527775297176	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGATGAATTCA	4745	False	NA	15	True	AATAAA	-24	NA	105927697	105950150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ENSMUST00000058444.10	chr7	-	2965	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	851	0	851	0	multi-exon	FALSE	canonical	3	79	junction_4	17.5752351019521	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8365	False	NA	-6	True	AATAAA	-15	NA	19296150	19264724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ENSMUST00000058470.16	chr11	-	6740	29	FSM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	0	0	0	0	multi-exon	FALSE	canonical	2	202	junction_15	57.5883527056204	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTATGTGTACTGACTG	NA	False	NA	-3	True	AATAAA	-22	NA	69649463	69624822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ENSMUST00000058472.13	chr5	-	3379	16	FSM	ENSMUSG00000042078.15	ENSMUST00000058472.13	3379	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	7.27552976307109	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTCGACTAACTTGTT	NA	False	NA	53	True	TTTAAA	-39	NA	114229631	114164970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114166526_114168157_114168248_114169621_114169704_114170769_114170882_114173213_114173322_114176596_114176674_114179884_114179959_114180248_114180378_114180866_114180993_114183628_114183693_114192537_114192663_114198118_114198191_114201085_114201185_114202928_114203015_114203586_114203748_114229212
ENSMUST00000058488.9	chr9	-	1346	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	7.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGGAGTGATGTGTGC	NA	False	NA	-12	True	AATAAA	-14	NA	89587121	89581258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_89582033_89584824_89585074_89586798
ENSMUST00000058491.8	chr12	+	1574	2	FSM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTATTATTCCTGTC	852	False	NA	19	True	TTTAAA	-29	NA	113149549	113153143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113149579_113151598
ENSMUST00000058496.8	chr11	-	12409	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTCACTTTATTTTT	8151	False	NA	2	True	AATAAA	-19	NA	77498641	77419987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
ENSMUST00000058496.8-0	chr11	-	7181	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	0	5228	0	-5228	multi-exon	FALSE	canonical	3	12	junction_19	12.6460443488519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGGCGTTTTAAAACT	8151	False	NA	NA	False	AATAAA	-17	NA	77498641	77425215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
ENSMUST00000058524.3	chr6	-	6536	4	FSM	ENSMUSG00000047749.3	ENSMUST00000058524.3	6536	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	7.31816613336672	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATGTATAGTGATT	NA	False	NA	-7	True	AATAAA	-14	NA	38276194	38264330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_38270073_38271992_38272255_38274886_38275023_38275798
ENSMUST00000058534.7	chr8	-	2997	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	2.5	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTTTTGGAATCATT	3617	False	NA	-5	True	AATAAA	-15	NA	73302114	73248404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73250951_73251366_73251442_73301738
ENSMUST00000058550.15	chr5	-	2804	7	FSM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_6	48.6052694902746	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGTAGGAGTTTTTG	NA	False	NA	-2	True	AATAAA	-18	NA	93354354	93329791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ENSMUST00000058577.5	chr3	+	4472	13	FSM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	9.75071222469871	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACTATAGAAGTGTTTT	NA	False	NA	18	True	AATAAA	-14	NA	53371086	53389176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
ENSMUST00000058578.8	chr3	-	3007	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	17	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTACATTTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	41037481	41020760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41023160_41024714_41024871_41037029
ENSMUST00000058578.8-0	chr3	-	1836	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	0	1171	0	1023	multi-exon	FALSE	canonical	3	569	junction_2	17	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCTCGAGTCGGACT	NA	False	NA	NA	False	AATAAA	-17	NA	41037481	41021931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41023160_41024714_41024871_41037029
ENSMUST00000058579.7	chr8	-	2262	1	FSM	ENSMUSG00000045538.7	ENSMUST00000058579.7	2262	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATGTCATGATTTCTTT	NA	False	NA	-9	True	AATAAA	-17	NA	106738514	106736252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106736300_106738500
ENSMUST00000058635.5	chr18	-	1346	1	FSM	ENSMUSG00000050304.5	ENSMUST00000239320.2	1346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTATGTGTTGTGAGTG	NA	False	NA	NA	False	CATAAA	-18	NA	37771776	37770430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_37770400_37771800
ENSMUST00000058639.11	chr12	-	1109	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	23.3837550449024	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGAAGCAGCATGGTTGG	NA	False	NA	-5	True	AATAAA	-24	NA	69629884	69624401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ENSMUST00000058659.9	chr15	-	1144	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCTGCCTCCTTGCCC	8084	False	NA	-3	True	AATAAA	-17	NA	78290107	78283755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78284231_78289438
ENSMUST00000058679.7	chr14	-	2570	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	9.18936583472681	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTGTGTGCCCTAGA	NA	False	NA	90	True	GATAAA	-16	NA	63781431	63760925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ENSMUST00000058702.7	chr7	-	1828	5	FSM	ENSMUSG00000054499.10	ENSMUST00000058702.7	1828	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	35.6405667743935	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24919284	24902264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919188
ENSMUST00000058714.10	chr10	+	1816	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTCTGTTGAATTTAT	NA	False	NA	10	True	AATAAA	-19	NA	43455164	43460261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_43455319_43458599
ENSMUST00000058716.14	chr5	+	4134	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_7	179.419817953258	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186391	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUST00000058720.13	chr9	-	3964	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTTGCCTTATTGTC	9120	False	NA	17	True	NA	NA	NA	45818175	45774806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ENSMUST00000058720.13-0	chr9	-	2688	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	486	790	0	0	multi-exon	FALSE	canonical	3	35	junction_13	9.64395754655542	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCAGGTTCCATTT	9606	False	NA	NA	False	AGTAAA	-18	NA	45817689	45775596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ENSMUST00000058735.12	chr13	-	3686	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_3	227.671803260746	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCGCCTCTTTTGTA	1727	False	NA	-2	True	AATAAA	-20	NA	58363467	58323969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUST00000058745.15	chr7	-	3691	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_12	14.9024606469312	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48530789	48516176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ENSMUST00000058746.7	chr7	+	1619	7	FSM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	95.130465969402	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCGAATCAGCTTGCTG	710	False	NA	7	True	NA	NA	NA	141048734	141051385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUST00000058754.9	chr4	-	3429	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	24.0005143977796	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	-1	True	ATTAAA	-20	NA	120955438	120916433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ENSMUST00000058755.5	chr7	+	6720	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTGCATTGGTGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	89053562	89062342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_89054180_89056239
ENSMUST00000058755.5-0	chr7	+	2986	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	0	3734	0	-3734	multi-exon	FALSE	canonical	3	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATAGTATACTCAATTG	NA	False	NA	NA	False	ATTAAA	-18	NA	89053562	89058608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_89054180_89056239
ENSMUST00000058764.6	chr2	+	2566	9	FSM	ENSMUSG00000039108.15	ENSMUST00000058764.6	2566	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	16.9627348915203	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGTCCGTCACCTGT	NA	False	NA	19	True	AATAAA	-20	NA	179668190	179677258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ENSMUST00000058771.13	chr7	+	2898	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	19.5	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATGATTCTCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	66872355	66878204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_66872378_66873356_66873640_66875611
ENSMUST00000058790.12	chr2	-	3833	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	7.56306816047562	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	False	NA	-2	True	AATAAA	-18	NA	102016730	101780547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
ENSMUST00000058793.14	chr15	-	3299	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	74.2839779158332	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGCTATAATGTCTTT	NA	False	NA	-11	True	AATAAA	-17	NA	83033585	83010176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ENSMUST00000058804.10	chr8	+	4929	5	FSM	ENSMUSG00000044676.11	ENSMUST00000058804.10	3180	5	-18	-1731	0	0	multi-exon	FALSE	canonical	1	4	junction_2	8.66025403784439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCTGAGACTTGCTTC	935	False	NA	NA	False	AATAAA	-16	NA	110806377	110819373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110806637_110809309_110809375_110810238_110810416_110810975_110811084_110815053
ENSMUST00000058844.6	chr6	-	3191	4	FSM	ENSMUSG00000051499.8	ENSMUST00000058844.6	3191	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	4.64279609239471	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCGTTTGGGTTTGC	5720	False	NA	-7	True	AATACA	-20	NA	47807801	47796199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47798636_47801974_47802131_47803895_47804023_47807329
ENSMUST00000058845.9	chr15	-	1855	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTGGCTTTTGGCTTGA	NA	False	NA	NA	False	AATAAA	-20	NA	25413850	25363362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_25365005_25413637
ENSMUST00000058860.14	chr7	-	1737	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	-66	748	-66	578	multi-exon	TRUE	canonical	3	69	junction_9	26.650458036969	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTGTGTCCATG	8698	False	NA	-8	True	AATAAA	-22	NA	30656294	30645420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
ENSMUST00000058865.14	chr3	+	2406	9	FSM	ENSMUSG00000038298.15	ENSMUST00000058865.14	2406	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.6226410894748	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTAAAATCTATCTGTT	7719	False	NA	NA	False	AATAAA	-22	NA	96737391	96778242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96737473_96757543_96757756_96758806_96759057_96761849_96761987_96763170_96763367_96764510_96764708_96775623_96775849_96776256_96776548_96777425
ENSMUST00000058879.8	chr7	+	1445	3	FSM	ENSMUSG00000074121.4	ENSMUST00000058879.8	1963	3	0	518	0	-518	multi-exon	FALSE	canonical	3	16	junction_1	4	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGGTATGTACTGTAA	637	False	NA	NA	False	NA	NA	NA	45063118	45066085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45063213_45064154_45064279_45064858
ENSMUST00000058884.10	chr16	-	2906	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	0	0	0	0	multi-exon	FALSE	canonical	1	121	junction_21	52.0035988284976	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCTTTAACTGTTCTT	NA	False	NA	-7	True	ATTAAA	-16	NA	13486034	13355823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ENSMUST00000058889.5	chr12	+	7775	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_4	33.1504521739726	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAAAAAATTGCTAG	9283	False	NA	NA	False	NA	NA	NA	65122379	65178832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ENSMUST00000058905.8	chr4	+	2191	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508302	106512479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106508329_106510314
ENSMUST00000058906.7	chr10	+	634	4	FSM	ENSMUSG00000049422.8	ENSMUST00000058906.7	939	4	327	-22	327	0	multi-exon	FALSE	canonical	3	15821	junction_1	833.259196702256	3611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75771839_75772071_75772280_75773140_75773289_75773408
ENSMUST00000058914.10	chr15	+	1982	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCATCTGGTTCATA	NA	False	NA	15	True	AATAAA	-22	NA	98927771	98935991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
ENSMUST00000058914.10-0	chr15	+	1552	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	430	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	4660.1984459415	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCATCTGGTTCATA	NA	False	NA	15	True	AATAAA	-22	NA	98928201	98935991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
ENSMUST00000058978.9	chr13	+	3842	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCCTCTCATTTATATC	NA	False	NA	14	True	ATTAAA	-18	NA	34148669	34172426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUST00000058978.9-0	chr13	+	1038	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	0	2804	0	0	multi-exon	FALSE	canonical	3	158	junction_1	21.7995922489899	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCAGCTTGTTGCACT	NA	False	NA	6	True	AATACA	-18	NA	34148669	34169622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUST00000058981.3	chr3	-	1112	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	5.56417109729742	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAGTCTAATTGCATTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	67371259	67365330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
ENSMUST00000059003.5	chrX	-	2964	12	FSM	ENSMUSG00000045802.14	ENSMUST00000059003.5	1479	12	-140	-1345	-140	0	multi-exon	FALSE	canonical	2	9	junction_1	7.96998501611043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTTCATGGCATCAT	NA	False	NA	NA	False	AATAAA	-10	NA	95411665	95349783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_95351419_95355322_95355384_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95411426
ENSMUST00000059018.14	chr8	-	4358	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACTTGTTTCTCGGGTG	NA	False	NA	NA	False	AGTAAA	-21	NA	122305545	122276178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
ENSMUST00000059018.14-0	chr8	-	1766	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	16	2576	0	1983	multi-exon	FALSE	canonical	3	287	junction_2	20.0962527601541	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGAGCTGAATGACCGGT	NA	False	NA	-20	True	AATAAA	-15	NA	122305529	122278754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
ENSMUST00000059021.10	chr3	-	1749	5	FSM	ENSMUSG00000040374.14	ENSMUST00000059021.10	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	14.3592304807744	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	False	NA	0	True	AATAAA	-20	NA	5641299	5625559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5641097
ENSMUST00000059042.15	chr5	-	4455	35	FSM	ENSMUSG00000060261.17	ENSMUST00000059042.15	4455	35	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_26	118.021213857574	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	621	False	NA	-3	True	AATAAA	-31	NA	134343614	134266687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134305225_134305283_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ENSMUST00000059045.8	chr15	+	1796	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACTAATGTCTTCTTT	879	False	NA	8	True	NA	NA	NA	76211596	76214877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76211864_76213229_76213437_76213555
ENSMUST00000059045.8-0	chr15	+	811	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	68	917	0	665	multi-exon	FALSE	canonical	0	0	junction_1	330.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACCTTACTGTACAGCA	947	False	NA	13	True	AATAAA	-19	NA	76211664	76213960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76211864_76213229_76213437_76213555
ENSMUST00000059052.9	chr16	-	1893	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	0	1109	0	-1109	multi-exon	FALSE	canonical	3	404	junction_1	0	399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGATTCTTTGAATATCAGA	7386	False	NA	-3	True	AATAAA	-23	NA	55858182	55854080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55855655_55857863
ENSMUST00000059057.14	chr9	-	1860	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGCAATTTCTTTATGA	6364	False	NA	NA	False	TATAAA	-14	NA	35179101	35128315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
ENSMUST00000059057.14-0	chr9	-	1645	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	0	215	0	0	multi-exon	FALSE	canonical	3	113	junction_5	33.1724006256	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6364	False	NA	-20	True	ATTAAA	-21	NA	35179101	35128530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
ENSMUST00000059078.4	chr16	+	3075	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGCCTCTGGAAATGCT	NA	False	NA	92	True	AATAAA	-23	NA	30418540	30421615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_30418500_30421600
ENSMUST00000059080.7	chr2	+	394	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	0	0	0	0	multi-exon	FALSE	canonical	3	3954	junction_5	1417.02976680097	769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGCTGTTTTTAC	NA	False	NA	26	True	AATAAA	-27	NA	179899169	179900238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ENSMUST00000059093.7	chr8	+	747	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGCGTGCTTCTGGCA	NA	False	NA	7	True	AATAAA	-18	NA	127149253	127152172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_127149570_127151741
ENSMUST00000059099.7	chrX	-	1041	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	158.307366291724	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAAACGTGGCTTGAG	NA	False	NA	-29	True	AGTAAA	-10	NA	99669541	99666513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
ENSMUST00000059112.12	chr15	-	2126	4	FSM	ENSMUSG00000048175.14	ENSMUST00000059112.12	1049	4	0	-1077	0	0	multi-exon	FALSE	canonical	3	32	junction_3	39.6848697728604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98043540	98032517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98034320_98039164_98039270_98040531_98040692_98043481
ENSMUST00000059115.13	chr8	-	6548	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_13	16.5128603280297	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTGAGTCCTTGCTTTT	NA	False	NA	-2	True	TATAAA	-45	NA	41586763	41443950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ENSMUST00000059115.13-0	chr8	-	6043	14	FSM	ENSMUSG00000045636.17	ENSMUST00000059115.13	6548	14	0	505	0	-367	multi-exon	FALSE	canonical	3	90	junction_13	16.5128603280297	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGCAGCCTCTGAC	NA	False	NA	-4	True	AATAAA	-21	NA	41586763	41444455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
ENSMUST00000059155.11	chr5	+	2697	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_2	41.7215471908701	2195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276360	28283660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ENSMUST00000059193.7	chr13	-	3336	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCATGCTTGGTGTCTG	NA	False	NA	NA	False	AATAAA	-3	NA	95754995	95738310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_95741446_95754794
ENSMUST00000059204.11	chr15	-	4632	4	FSM	ENSMUSG00000043556.11	ENSMUST00000059204.11	4632	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTCAGTTCCATTTTT	292	False	NA	NA	False	AATAAA	-16	NA	26895666	26540544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_26543907_26552526_26553139_26789598_26789689_26895098
ENSMUST00000059206.8	chr9	+	1863	15	FSM	ENSMUSG00000032322.15	ENSMUST00000059206.8	1863	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	2.96922995583236	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTCCTTTGCTGGGGT	NA	False	NA	NA	False	AATAAA	-27	NA	55997245	56036172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035010_56035145_56035872
ENSMUST00000059229.16	chr5	-	2044	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	111.169420255752	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTGTTTTAAAGGG	NA	False	NA	-20	True	AATAAA	-18	NA	110417753	110407020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ENSMUST00000059231.4	chr19	-	2161	1	FSM	ENSMUSG00000047604.4	ENSMUST00000059231.4	2161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTTGTTTTTGTTTGG	NA	False	NA	NA	False	AATAAA	-23	NA	41836571	41834410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41834400_41836600
ENSMUST00000059250.8	chr12	+	2609	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	20.0277585143997	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTAGTGTTGTGTGTTAC	NA	False	NA	2	True	AATAAA	-20	NA	55883108	55916521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
ENSMUST00000059270.10	chr13	+	6780	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_14	60.7064258923889	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGGTATTTGTCTTTA	1714	False	NA	5	True	AGTAAA	-19	NA	12410251	12453774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ENSMUST00000059271.13	chr3	+	1947	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	577	3204	0	0	multi-exon	FALSE	canonical	3	59	junction_11	6.94526359402813	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTAGTGTATTTTCTTT	657	False	NA	29	True	AATACA	-40	NA	104772395	104834176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ENSMUST00000059272.10	chr2	+	2136	2	FSM	ENSMUSG00000043342.10	ENSMUST00000059272.10	2136	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGTGTGACTGCTCTCTG	NA	False	NA	NA	False	AATAAA	-41	NA	74528070	74530552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_74529178_74529523
ENSMUST00000059286.14	chr6	+	3196	13	FSM	ENSMUSG00000060477.15	ENSMUST00000059286.14	3196	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.70820393249937	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTGGGTGAATTT	NA	False	NA	26	True	AATAAA	-31	NA	113615427	113671987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113615603_113624599_113624783_113642663_113642808_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ENSMUST00000059287.14	chr4	-	4804	16	FSM	ENSMUSG00000028664.15	ENSMUST00000059287.14	4804	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	7.67390962214756	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCCCTGTACTCTGTAAG	NA	False	NA	NA	False	AATAAA	-17	NA	136563267	136380918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402845_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ENSMUST00000059297.6	chrX	+	2364	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	339.283886377699	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTTGCATAGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133502034	133507803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
ENSMUST00000059305.17	chr7	-	1932	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTCTCAGAAGTCAATG	NA	False	NA	NA	False	NA	NA	NA	59654859	59632242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ENSMUST00000059305.17-0	chr7	-	1311	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	0	621	0	-614	multi-exon	FALSE	canonical	3	1774	junction_5	121.666210044805	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654859	59632863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ENSMUST00000059319.8	chr11	+	1568	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTATCTGTGTAGTTC	NA	False	NA	7	True	ATTAAA	-16	NA	22462087	22469234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
ENSMUST00000059319.8-0	chr11	+	1211	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	357	0	357	0	multi-exon	FALSE	canonical	3	52	junction_3	9.0921211313239	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTATCTGTGTAGTTC	NA	False	NA	7	True	ATTAAA	-16	NA	22462444	22469234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
ENSMUST00000059331.9	chr7	+	2173	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAGGCTCTGAGACAG	6964	False	NA	NA	False	AATAAA	-18	NA	18725169	18735689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18725280_18725756_18726546_18734415
ENSMUST00000059341.5	chr12	+	2367	3	FSM	ENSMUSG00000045064.6	ENSMUST00000059341.5	4482	3	99	2016	99	396	multi-exon	FALSE	canonical	1	1	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGAAGTGGCTGGTATC	NA	False	NA	NA	False	TTTAAA	-18	NA	85335463	85344116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85335560_85336325_85337656_85343175
ENSMUST00000059354.15	chr4	-	1640	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	54.2647829320883	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTCCTTATGTGTCTAA	3747	False	NA	NA	False	AATAAA	-17	NA	41741359	41738492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
ENSMUST00000059372.11	chr2	-	5549	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	0	429	0	-426	multi-exon	FALSE	canonical	3	12	junction_3	4.63033476111609	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTTGTATTTGGACC	NA	False	NA	NA	False	AATAAA	-13	NA	131194801	131140412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
ENSMUST00000059390.13	chr7	+	5097	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	0	0	0	0	multi-exon	TRUE	canonical	3	302	junction_1	75.0223744403406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCACTGTGATGCTAATT	9989	False	NA	NA	False	ACTAAA	-15	NA	118339448	118442189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUST00000059390.13-0	chr7	+	3099	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	521	1477	0	0	multi-exon	FALSE	canonical	3	302	junction_1	75.0223744403406	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGTGTCTCGGTGTGTG	NA	False	NA	10	True	ATTAAA	-21	NA	118339969	118440712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUST00000059438.11	chr7	-	2226	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	49	4498	0	468	multi-exon	FALSE	canonical	3	85	junction_5	3.61109401705356	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGATTACGTTGTTTC	NA	False	NA	-7	True	AATAGA	-13	NA	130964439	130944446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ENSMUST00000059458.5	chr11	-	5528	5	FSM	ENSMUSG00000050567.17	ENSMUST00000059458.5	5528	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	8.0156097709407	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAGCATGTTTGACTTC	NA	False	NA	-8	True	AATAAA	-22	NA	50183138	50146460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50182552
ENSMUST00000059462.12	chr6	+	2654	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	32.5490399243972	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATATTATGCCTTTG	NA	False	NA	23	True	NA	NA	NA	71520780	71558563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUST00000059468.6	chr11	-	1224	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTGCCTTATGGTA	6595	False	NA	-2	True	AATAAA	-37	NA	78642555	78641331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78641300_78642600
ENSMUST00000059472.10	chr6	-	2804	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	84.6271233116192	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416541	72409781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUST00000059482.6	chr17	+	1253	6	FSM	ENSMUSG00000050762.6	ENSMUST00000059482.6	1253	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.88262224629348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	4531	False	NA	NA	False	NA	NA	NA	24257117	24264928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24257336_24261027_24261055_24261775_24261939_24263233_24263506_24263832_24264003_24264525
ENSMUST00000059498.12	chr1	+	6327	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_16	20.6122358303988	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTAGTTTTAAATTTCAA	NA	False	NA	7	True	AATAAA	-16	NA	151631124	151697802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ENSMUST00000059509.3	chrX	+	743	2	FSM	ENSMUSG00000050435.3	ENSMUST00000059509.3	743	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCAGTCATTTTTTTTTT	NA	False	NA	1	True	AATAAA	-16	NA	113814708	113815638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_113814900_113815086
ENSMUST00000059524.7	chr16	-	2093	1	FSM	ENSMUSG00000048087.7	ENSMUST00000059524.7	2093	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1908	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAATAAAAAAAAATAAA	NA	False	NA	NA	False	GATAAA	-31	NA	45975440	45973347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_45973300_45975400
ENSMUST00000059539.5	chr6	-	1844	1	FSM	ENSMUSG00000055430.5	ENSMUST00000059539.5	1844	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCTGTACTGTCATCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	58884061	58882217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_58882200_58884100
ENSMUST00000059546.6	chr10	-	880	1	FSM	ENSMUSG00000045055.6	ENSMUST00000059546.6	880	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGCTGCTGTGCAGGTG	NA	False	NA	NA	False	NA	NA	NA	128613119	128612239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128612200_128613100
ENSMUST00000059551.7	chr10	-	1398	4	FSM	ENSMUSG00000046822.15	ENSMUST00000059551.7	3680	4	26	2256	0	-2255	multi-exon	FALSE	canonical	3	7	junction_3	25.0377492776186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGTGGCCATGTC	NA	False	NA	-4	True	TTTAAA	-22	NA	80873116	80866629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80867535_80869445_80869768_80870751_80870844_80873037
ENSMUST00000059555.15	chr9	+	3456	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	0	0	0	0	multi-exon	TRUE	canonical	3	762	junction_1	63.2035402489449	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	10	True	AATAAA	-18	NA	55056137	55114813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ENSMUST00000059562.14	chr3	+	2108	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGAGTCACCGAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	52948948	53169100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
ENSMUST00000059579.12	chr9	+	3702	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_7	15.6165470962654	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACTGTGATTTGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	13739011	13757837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
ENSMUST00000059580.11	chr5	+	2739	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	242.120647949045	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	NA	False	NA	29	True	AATAAA	-38	NA	124577992	124600371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUST00000059582.9	chr19	-	999	5	FSM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	20.6079474960511	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTTAATAAAAGTAT	NA	False	NA	-34	True	NA	NA	NA	10533115	10527855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
ENSMUST00000059588.8	chr8	+	5692	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTCCTTTAGTTCGA	NA	False	NA	NA	False	AATAAA	-16	NA	105318082	105325658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_105318228_105320111
ENSMUST00000059595.11	chr11	-	3548	17	FSM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	0	4861	0	-71	multi-exon	FALSE	canonical	2	9	junction_8	3.24458683810435	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATATTATTGATATAATT	6284	False	NA	NA	False	AATAAA	-18	NA	108234754	107829073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436_107872529_107874710_107874885_107877073_107877212_107903452_107903550_107903770_107903906_107905050_107905208_107944800_107944930_107948587_107948700_108082955_108083039_108231471_108231504_108234320
ENSMUST00000059596.8	chr7	+	1392	1	FSM	ENSMUSG00000046058.8	ENSMUST00000059596.8	1392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCTGTCCTTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	27967305	27968697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27967300_27968700
ENSMUST00000059619.3	chr15	+	2560	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGACCTTGGGGAAAAGC	NA	False	NA	NA	False	AATAAA	-20	NA	78726823	78735097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78726926_78731294_78732020_78733364
ENSMUST00000059644.13	chr5	+	6376	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	0	3134	0	0	multi-exon	TRUE	canonical	3	71	junction_15	26.3991792801721	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	7	True	CATAAA	-21	NA	28522174	28621103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ENSMUST00000059658.6	chr10	-	1221	7	FSM	ENSMUSG00000050157.7	ENSMUST00000059658.6	1221	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	10.6991692304694	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAATTATGTCTCCTGT	4916	False	NA	NA	False	AGTAAA	-42	NA	75776506	75773556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75774191_75774995_75775166_75775239_75775315_75775553_75775673_75775764_75775852_75776227_75776255_75776397
ENSMUST00000059662.8	chr15	-	1491	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	23.0771652408946	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTTTGTATTTGATT	NA	False	NA	-5	True	AATGAA	-40	NA	27630779	27606004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ENSMUST00000059666.6	chr14	-	761	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	59	1495	59	329	multi-exon	FALSE	canonical	3	53	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGAGGCTGGTTTG	5364	False	NA	NA	False	TATAAA	-7	NA	20133192	20127198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20127713_20132945
ENSMUST00000059680.7	chr15	+	2652	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	0	0	0	0	multi-exon	TRUE	canonical	3	392	junction_2	32.4174164437712	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGAGCAAGCATGCCAT	-5	True	NA	18	True	AATAAA	-26	NA	12321535	12351351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
ENSMUST00000059692.4	chr8	-	1850	6	FSM	ENSMUSG00000031651.6	ENSMUST00000059692.4	1850	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	54.3963234051714	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	9272	False	NA	0	True	TATAAA	-19	NA	43594523	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43594003
ENSMUST00000059704.6	chr3	+	1028	1	FSM	ENSMUSG00000048106.7	ENSMUST00000059704.6	1028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAATTGTACCAAGGA	NA	False	NA	NA	False	AAAAAG	-35	NA	19949145	19950173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_19949100_19950200
ENSMUST00000059718.6	chr10	-	1960	2	FSM	ENSMUSG00000047492.6	ENSMUST00000059718.6	5319	2	2572	787	2572	-787	multi-exon	FALSE	canonical	3	17	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAATTGTGTAAGGGGTT	8018	False	NA	NA	False	AATAAA	-20	NA	127187708	127185512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127186881_127187116
ENSMUST00000059743.12	chr1	+	1154	11	FSM	ENSMUSG00000034343.15	ENSMUST00000059743.12	1154	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	126.177692164661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTGGCAATAAGAAACCC	311	False	NA	NA	False	NA	NA	NA	91178032	91213462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91178160_91181481_91181550_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000059775.15	chr17	-	1631	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_2	253.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATTTTCTTGAAG	NA	False	NA	84	True	AATAAA	-26	NA	71158202	71151199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71152268_71153166_71153394_71157866
ENSMUST00000059787.15	chr18	+	5766	15	FSM	ENSMUSG00000044393.16	ENSMUST00000059787.15	5766	15	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	15.0483913303932	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACCTCTCTCCATGTCT	NA	False	NA	10	True	AATAAA	-19	NA	20691130	20737578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_20691402_20706545_20706582_20707996_20708132_20712096_20712259_20712390_20712536_20713568_20713736_20715764_20715903_20715993_20716180_20723004_20723271_20724890_20725034_20725328_20725557_20727120_20727349_20729016_20729139_20731395_20731726_20734369
ENSMUST00000059790.11	chr4	+	3886	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	51.5866988670529	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143138995	143147661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
ENSMUST00000059808.5	chrX	+	1052	1	FSM	ENSMUSG00000048155.5	ENSMUST00000059808.5	1052	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTTCTGCTAGTTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	135828073	135829125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135828100_135829100
ENSMUST00000059817.12	chr13	-	3532	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	7.32717544487642	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGGGTCATTCTTACA	6050	False	NA	NA	False	AATAAA	-26	NA	64301016	64280831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ENSMUST00000059826.10	chr2	-	4015	3	FSM	ENSMUSG00000050556.10	ENSMUST00000059826.10	4015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAATAATAATAATA	NA	False	NA	NA	False	NA	NA	NA	167032075	166945331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166948280_167029976_167030709_167031740
ENSMUST00000059844.13	chr17	-	1908	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_4	48.1730214954387	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCAAAGGGGTTTTGACC	NA	False	NA	33	True	NA	NA	NA	47063140	47046630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ENSMUST00000059849.15	chr2	-	2637	13	FSM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	0	0	0	0	multi-exon	TRUE	canonical	3	539	junction_7	54.5501807716732	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGGAATCTGTTTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	25101501	25089723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ENSMUST00000059851.14	chr7	-	5616	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	0	369	0	-369	multi-exon	FALSE	canonical	3	85	junction_2	16	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGATATTTCTGCAG	NA	False	NA	-10	True	AATAAA	-12	NA	119494968	119452387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_119457280_119458602_119459139_119494780
ENSMUST00000059899.3	chrX	-	4234	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	4.64279609239471	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTGTTTGGTAGTGG	NA	False	NA	-7	True	AATAAA	-14	NA	55643429	55630871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
ENSMUST00000059914.13	chr4	+	6506	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	10.2468585254619	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAAGTGTATGAGTCT	2	True	NA	NA	False	TATAAA	-29	NA	11485957	11550684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ENSMUST00000059954.14	chr2	-	1809	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_15	32.6696597268271	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164699631	164681437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
ENSMUST00000059955.15	chr16	+	1574	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	32.9952648117878	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGAACAATCCTTGCT	9519	False	NA	24	True	AATAAA	-29	NA	16120841	16127504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
ENSMUST00000059970.9	chr14	-	2263	12	FSM	ENSMUSG00000034450.9	ENSMUST00000059970.9	2263	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.97086212624353	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGCCCTTGAGGAAT	NA	False	NA	NA	False	ATTAAA	-16	NA	66246656	66224234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_66225144_66225630_66225722_66227827_66227993_66228478_66228629_66234272_66234350_66235008_66235117_66237282_66237469_66240039_66240131_66241530_66241626_66243285_66243412_66245487_66245590_66246493
ENSMUST00000059975.8	chr1	+	2112	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCGTTCTAGTTGCC	NA	False	NA	NA	False	AATAAA	-20	NA	95241347	95263009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_95241976_95252833_95252969_95261660
ENSMUST00000059975.8-0	chr1	+	1355	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	5	752	0	-752	multi-exon	FALSE	canonical	3	133	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTTTTATATTTATAT	NA	False	NA	61	True	AATAAA	-22	NA	95241352	95262257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_95241976_95252833_95252969_95261660
ENSMUST00000059980.11	chr1	+	558	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	0	0	0	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACATAGCTTGGTTT	NA	False	NA	19	True	AATAAA	-17	NA	72750448	72752972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
ENSMUST00000059980.11-0	chr1	+	362	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	196	0	0	multi-exon	FALSE	canonical	2	9164	junction_1	3956.18005993998	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTTTTGCCTT	NA	False	NA	-2	True	AATAAA	-15	NA	72750448	72752776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
ENSMUST00000059983.10	chr6	-	820	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	0.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGCGCTTTACTCCTGTG	8093	False	NA	-18	True	AATAAA	-25	NA	72367686	72362205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72362637_72365244_72365404_72367456
ENSMUST00000059983.10-0	chr6	-	651	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	164	5	164	0	multi-exon	FALSE	canonical	3	289	junction_1	0.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACGAGGCGCTTTACTC	8257	False	NA	-23	True	AATAAA	-20	NA	72367522	72362210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72362637_72365244_72365404_72367456
ENSMUST00000060005.15	chr16	-	2324	4	FSM	ENSMUSG00000022951.17	ENSMUST00000060005.15	2324	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTTGGTCGTTTTCT	NA	False	NA	-3	True	AATAAA	-24	NA	92263034	92188840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
ENSMUST00000060010.3	chr11	-	2531	4	FSM	ENSMUSG00000044367.8	ENSMUST00000060010.3	2531	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGATGGTCAAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	70111820	70107614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70108748_70109418_70110157_70111020_70111165_70111304
ENSMUST00000060049.8	chr5	-	2073	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_4	45.778679535347	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTTTTTGTTTTT	9954	False	NA	0	True	NA	NA	NA	34326871	34311223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
ENSMUST00000060050.6	chr4	-	1226	2	FSM	ENSMUSG00000050105.6	ENSMUST00000060050.6	1226	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGACCATGAGTTTGG	3414	False	NA	-23	True	AATAAA	-18	NA	133981417	133978420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133979570_133981340
ENSMUST00000060061.11	chr3	+	3198	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	12.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337567	89342435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89338037_89338433_89338484_89339756
ENSMUST00000060067.12	chr16	+	2648	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_10	248.960018695956	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501933	4525559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ENSMUST00000060077.7	chr16	+	3097	7	FSM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	26.4916129285394	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTATTTGTTTCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	58490654	58500749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
ENSMUST00000060092.13	chr2	+	5174	22	FSM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_5	24.2975694686972	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	1678	False	NA	17	True	AATAAA	-21	NA	5956279	6061514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ENSMUST00000060101.10	chrX	-	1250	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_2	29	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTTAAGACTTGGTC	NA	False	NA	NA	False	NA	NA	NA	135073091	135070829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135071799_135072384_135072455_135072880
ENSMUST00000060108.7	chrX	-	2699	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	24.9377001523575	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539907	12521117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ENSMUST00000060148.6	chr13	+	8753	9	FSM	ENSMUSG00000021366.9	ENSMUST00000060148.6	8753	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	8.24526379202024	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGGTGCTTACGTCTC	NA	False	NA	2	True	AGTAAA	-15	NA	42205496	42338502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_42205567_42208875_42209019_42276635_42276690_42307855_42313795_42316826_42316961_42317692_42317869_42321037_42321140_42334907_42335408_42336867
ENSMUST00000060173.9	chr2	-	2164	5	FSM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	9.60143218483576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCAGTGTTGGGTCTCT	1029	False	NA	-2	True	AATAAA	-14	NA	181241005	181237010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239403_181240724
ENSMUST00000060175.8	chr7	+	4831	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	55.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTCGTCGTTGTG	NA	False	NA	NA	False	NA	NA	NA	120276853	120334077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_120277094_120325342_120325556_120329699
ENSMUST00000060188.14	chr16	-	4078	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCTTTTTAATTA	NA	False	NA	3	True	ATTAAA	-28	NA	31094095	31070354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ENSMUST00000060188.14-0	chr16	-	2385	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	0	1693	0	-1693	multi-exon	FALSE	canonical	3	769	junction_1	115.541161496672	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTGTTAGAAGAATGTG	NA	False	NA	-14	True	AATAAA	-16	NA	31094095	31072047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ENSMUST00000060212.13	chr10	+	2007	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	35.0731015021425	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTCCCTCATATTCA	NA	False	NA	38	True	AATGAA	-24	NA	13376744	13391287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ENSMUST00000060214.10	chr4	-	1864	4	FSM	ENSMUSG00000050854.10	ENSMUST00000060214.10	1864	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.18993502999218	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTCTGCACCATGGCA	8325	False	NA	NA	False	AATAAA	-23	NA	118400925	118398137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_118399569_118399797_118399958_118400552_118400697_118400796
ENSMUST00000060223.4	chr18	+	3430	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACACTTCTTTCTGTCCC	4254	False	NA	NA	False	NA	NA	NA	84106187	84115653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_84106499_84112534
ENSMUST00000060225.6	chr7	+	2031	2	FSM	ENSMUSG00000044317.8	ENSMUST00000060225.6	2882	2	0	851	0	-851	multi-exon	FALSE	canonical	2	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGAAAAAAATGAGGTT	NA	False	NA	NA	False	NA	NA	NA	18946462	18957248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18946560_18955314
ENSMUST00000060226.11	chr5	+	2074	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	0	0	0	0	multi-exon	FALSE	canonical	3	3477	junction_2	89.3395520223577	4587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTTTTATATTAATG	NA	False	NA	12	True	AATAAA	-22	NA	124678757	124688569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
ENSMUST00000060232.8	chr4	+	2133	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_6	76.6414924655499	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTAATGGCTGCCTTT	-17	True	NA	86	True	NA	NA	NA	8535643	8607778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ENSMUST00000060241.3	chrX	+	873	1	FSM	ENSMUSG00000051582.3	ENSMUST00000060241.3	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCCAGCAGACGCGAA	NA	False	NA	NA	False	NA	NA	NA	99472618	99473491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_99472600_99473500
ENSMUST00000060251.8	chr9	-	2232	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	0	0	0	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATGTCTTGTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	121687428	121677628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
ENSMUST00000060251.8-0	chr9	-	457	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	800	975	0	0	multi-exon	FALSE	canonical	3	2040	junction_3	82.3825763671475	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686628	121678603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
ENSMUST00000060265.6	chr5	-	3424	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGTGAGTTAATAACAT	NA	False	NA	-3	True	AATAAA	-19	NA	97540238	97530056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_97532729_97539486
ENSMUST00000060301.6	chr15	-	618	4	FSM	ENSMUSG00000044678.12	ENSMUST00000060301.6	791	4	173	0	173	0	multi-exon	FALSE	canonical	3	104	junction_3	10.2740233382816	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTGGTTTGACTTCTG	949	False	NA	-2	True	ATTAAA	-18	NA	74671662	74668722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_74669121_74670383_74670483_74671267_74671345_74671618
ENSMUST00000060311.12	chr5	-	7835	31	FSM	ENSMUSG00000039959.14	ENSMUST00000060311.12	7835	31	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_30	59.962062080026	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTGATAAAGGGCTGA	NA	False	NA	2	True	AATAAA	-24	NA	135573969	135435384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135573790
ENSMUST00000060315.12	chr7	+	2590	8	FSM	ENSMUSG00000056144.15	ENSMUST00000060315.12	2590	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	5.3642809587196	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGAATCTGTTCATT	NA	False	NA	7	True	ATTAAA	-15	NA	103893665	103911441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_103893814_103896737_103897358_103897893_103897990_103898601_103898833_103908619_103908643_103909324_103909426_103909684_103909712_103910097
ENSMUST00000060336.5	chr7	+	3030	3	FSM	ENSMUSG00000050917.6	ENSMUST00000060336.5	3030	3	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	22.5	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTCTGCTTTG	8002	False	NA	28	True	ATTAAA	-18	NA	144415122	144418980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_144415570_144415968_144416073_144416501
ENSMUST00000060345.6	chr9	-	1116	1	FSM	ENSMUSG00000049073.8	ENSMUST00000060345.6	1116	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATTTAACTATATTAC	NA	False	NA	NA	False	NA	NA	NA	40039335	40038219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_40038200_40039300
ENSMUST00000060366.7	chr17	-	3530	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCTTTGAGTAAT	NA	False	NA	NA	False	AATAAA	-10	NA	84495375	84491358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_84494585_84495071
ENSMUST00000060389.10	chr8	+	3852	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	22.9280151245375	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	8111	False	NA	8	True	AATAAA	-25	NA	95328564	95386903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUST00000060396.7	chr18	-	2959	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	-9	1421	0	-1421	multi-exon	FALSE	canonical	3	132	junction_7	28.1852472628023	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTATGGTTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	31742964	31714641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ENSMUST00000060404.5	chr1	+	5135	5	FSM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	13.683932183404	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155916635	155944607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ENSMUST00000060417.11	chr11	-	1463	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	13.984117975602	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTGGGAGATTGTCTCT	NA	False	NA	1	True	ATTAAA	-21	NA	77404196	77398924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
ENSMUST00000060419.2	chr4	-	1445	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTAGTCAGGCGGAGAA	4504	False	NA	-10	True	AATAAA	-17	NA	127247874	127244878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_127246275_127247825
ENSMUST00000060427.6	chr8	-	1524	1	FSM	ENSMUSG00000053560.6	ENSMUST00000060427.6	1524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2080	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTTGTCTGGCTTGCTT	NA	False	NA	-1	True	AATAAA	-20	NA	85389483	85387959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85388000_85389500
ENSMUST00000060433.10	chr7	+	1519	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	1	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGGCTTTTTCCGGGC	NA	False	NA	22	True	AATAAA	-21	NA	142622985	142624830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_142623251_142623491_142623588_142623672
ENSMUST00000060435.8	chr4	-	3445	12	FSM	ENSMUSG00000050989.11	ENSMUST00000060435.8	3445	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.13603423830188	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGCTTTTCCTTTGA	8369	False	NA	1	True	AATAAA	-19	NA	134279477	134265202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272625_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ENSMUST00000060444.6	chr11	+	2061	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCTCTGGCCTTTCCTT	922	False	NA	18	True	ATTAAA	-26	NA	70655034	70663754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70655376_70662034
ENSMUST00000060447.13	chr2	-	968	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_3	75.5058864519111	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCATTTTCTCTTTTCTT	6806	False	NA	-5	True	AATAAA	-34	NA	69715959	69701541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ENSMUST00000060455.15	chr2	+	1569	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	15.0811140172071	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTCCTCTGAAGT	NA	False	NA	21	True	AATAAA	-30	NA	120838883	120847385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUST00000060474.14	chrX	-	2375	10	FSM	ENSMUSG00000050379.16	ENSMUST00000060474.14	3457	10	165	917	0	-917	multi-exon	TRUE	canonical	3	7	junction_1	15.297865581774	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCCATGATCTGCTCCC	NA	False	NA	NA	False	AATAAA	-19	NA	36253144	36175895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36176908_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUST00000060481.9	chrX	-	3509	2	FSM	ENSMUSG00000045284.10	ENSMUST00000060481.9	3509	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTCTGTTTTTCTTTA	NA	False	NA	-5	True	AATAAA	-40	NA	43879074	43875446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_43877171_43877289
ENSMUST00000060484.9	chr6	+	1558	6	FSM	ENSMUSG00000049037.9	ENSMUST00000060484.9	1558	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	6.56048778674269	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTGTGTAAACTAGGAAA	NA	False	NA	NA	False	NA	NA	NA	122898806	122911578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122899039_122901675_122901790_122904922_122905025_122907635_122907788_122909107_122909224_122910736
ENSMUST00000060490.11	chr13	+	2765	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGTAGTTTCTACAGTA	NA	False	NA	NA	False	AATAAA	-12	NA	93441666	93540298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ENSMUST00000060490.11-0	chr13	+	4995	9	FSM	ENSMUSG00000007617.19	ENSMUST00000060490.11	2765	9	-1057	-1173	0	-166	multi-exon	FALSE	canonical	3	36	junction_8	6.10199762372946	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTCTGGAGAATGTA	NA	False	NA	8	True	AATACA	-20	NA	93440609	93541471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ENSMUST00000060500.9	chr3	+	5027	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	7.24568837309472	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTATGTTCTTAAAAT	NA	False	NA	19	True	AATAAA	-22	NA	28835424	28852995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
ENSMUST00000060513.8	chr9	-	2859	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTCATGTT	9248	False	NA	NA	False	AGTAAA	-25	NA	26910845	26885439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUST00000060513.8-1	chr9	-	2035	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	0	824	0	408	multi-exon	FALSE	canonical	3	181	junction_10	23.6862829502647	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTCTCCTAAGGCAGT	9248	False	NA	-1	True	ATTAAA	-27	NA	26910845	26886263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUST00000060531.16	chr5	+	3923	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	205.5	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCACAACCTTTCTTG	4071	False	NA	24	True	AATAAA	-35	NA	105847834	105963081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_105848121_105880095_105880241_105959589
ENSMUST00000060561.15	chr6	+	1387	7	FSM	ENSMUSG00000047115.16	ENSMUST00000060561.15	2730	7	84	1259	0	0	multi-exon	FALSE	canonical	3	30	junction_5	5.75663867972351	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49344756	49366214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362306_49362390_49365750
ENSMUST00000060576.8	chrX	+	4238	3	FSM	ENSMUSG00000049929.8	ENSMUST00000060576.8	4238	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATACTTTGGTCAGTTATG	NA	False	NA	NA	False	AATAAA	-23	NA	105964230	105977506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_105964596_105967683_105967786_105973735
ENSMUST00000060579.10	chr12	+	2614	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATCACATCTTAATAT	2294	False	NA	NA	False	AATAAA	-23	NA	69230930	69233544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69230900_69233500
ENSMUST00000060608.13	chr1	+	2223	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	9.38083151964686	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGAGGATTGTTTTGTTT	NA	False	NA	28	True	AATAAA	-16	NA	60382481	60427219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ENSMUST00000060632.8	chr8	+	5214	13	FSM	ENSMUSG00000033009.16	ENSMUST00000060632.8	5214	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	44.1823085509222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGGTGGTAATTTATA	NA	False	NA	7	True	AATAAA	-17	NA	94763918	94794549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94764071_94765595_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ENSMUST00000060634.14	chr6	-	1224	9	FSM	ENSMUSG00000051169.15	ENSMUST00000060634.14	1224	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	50.3374549912885	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGCAGATGTTTACC	NA	False	NA	-18	True	AATAAA	-32	NA	113396280	113392289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113392684_113393267_113393394_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ENSMUST00000060645.13	chr2	-	1586	3	FSM	ENSMUSG00000078923.11	ENSMUST00000060645.13	1586	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1070	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9441	False	NA	NA	False	AATAAA	-22	NA	167473892	167449763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167451168_167459748_167459898_167473859
ENSMUST00000060650.7	chrX	-	2112	12	FSM	ENSMUSG00000036131.13	ENSMUST00000060650.7	2112	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.995859195463938	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGACTCTGTGAATGT	NA	False	NA	NA	False	NA	NA	NA	50031587	49984056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_49985119_49986126_49986203_49986320_49986390_49987600_49987765_49989202_49989299_49990555_49990704_49990871_49990987_49998627_49998726_50001456_50001536_50004222_50004266_50005054_50005160_50031530
ENSMUST00000060652.5-1	chr15	+	657	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	-19	2362	0	0	multi-exon	FALSE	canonical	3	627	junction_1	138.867742834684	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTGTTTATTACTG	9616	False	NA	40	True	AATAAA	-42	NA	44291487	44299290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUST00000060673.8	chr16	-	3923	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTCTCCATAGACATG	NA	False	NA	NA	False	NA	NA	NA	21814413	21772566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ENSMUST00000060673.8-0	chr16	-	3107	10	FSM	ENSMUSG00000044626.14	ENSMUST00000060673.8	3923	10	150	666	0	-666	multi-exon	FALSE	canonical	3	141	junction_8	25.7197623013804	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAACGTGAAGGAGAAA	NA	False	NA	-9	True	NA	NA	NA	21814263	21773232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792898_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ENSMUST00000060710.9	chr18	-	1945	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_14	20.2922524674833	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGATGTCTCTAAGCC	2792	False	NA	-15	True	AATAAA	-22	NA	34884586	34866045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ENSMUST00000060711.8	chr9	+	7149	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTTTGTCTTTCAG	NA	False	NA	13	True	NA	NA	NA	111101012	111108161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_111101000_111108200
ENSMUST00000060714.10	chrX	+	3344	1	FSM	ENSMUSG00000050148.10	ENSMUST00000060714.10	3344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTATTTTGCCTTTT	7332	False	NA	13	True	ATTAAA	-40	NA	152281222	152284566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_152281200_152284600
ENSMUST00000060722.8	chr18	+	2302	3	FSM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	140.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35962840	35994741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35963040_35991445_35992510_35993702
ENSMUST00000060762.6	chr18	+	5472	4	FSM	ENSMUSG00000024276.8	ENSMUST00000060762.6	5472	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	32.0659043568433	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGGATCTCTTTTT	NA	False	NA	22	True	GATAAA	-24	NA	24087761	24097730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24087919_24089395_24089911_24090111_24090254_24093072
ENSMUST00000060766.16	chr11	-	6163	32	FSM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	214.48063252277	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTAGAATTGCAGTTT	NA	False	NA	-7	True	AATAAA	-19	NA	86648327	86585480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627884_86628105_86648073
ENSMUST00000060783.7	chr7	-	2356	2	FSM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCGTCCTTAAGATGT	5321	False	NA	-1	True	AATAAA	-16	NA	126944595	126941966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126944048_126944320
ENSMUST00000060792.6	chr11	-	3491	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGAGGTTATATTGT	NA	False	NA	1	True	AATAAA	-19	NA	100861713	100847558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100850152_100860815
ENSMUST00000060798.6	chr5	-	3659	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	7.58287544405155	684	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCCTGATTGGGCCT	NA	False	NA	10	True	AATAAA	-27	NA	115273034	115260608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
ENSMUST00000060805.7	chr13	-	5105	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_8	31.720775722809	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6383	False	NA	-18	True	AATAAA	-21	NA	49121493	49032694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ENSMUST00000060808.10	chr15	-	6394	36	FSM	ENSMUSG00000036606.18	ENSMUST00000060808.10	6394	36	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_31	53.5453727111457	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	NA	False	NA	-5	True	AATACA	-19	NA	89054891	89039751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771
ENSMUST00000060833.14	chr1	+	2515	7	FSM	ENSMUSG00000000544.15	ENSMUST00000060833.14	2515	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_6	19.1398362932741	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957806	165994079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
ENSMUST00000060834.12	chr7	+	982	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	88.8144132446981	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008141	30013729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
ENSMUST00000060835.12	chr11	+	4763	31	FSM	ENSMUSG00000010342.17	ENSMUST00000060835.12	4763	31	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_12	24.6584671056414	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295890	87446649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
ENSMUST00000060837.10	chr6	-	4035	5	FSM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	41.9344726925235	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTTTGTTTTGAA	NA	False	NA	3	True	AATAAA	-21	NA	85351546	85311943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85351079
ENSMUST00000060864.13	chr4	+	3947	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	6.61647774709307	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACTGTCATTAGCTCTC	NA	False	NA	5	True	AATAAA	-17	NA	43441938	43448064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
ENSMUST00000060864.13-0	chr4	+	2761	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	1186	0	-196	0	multi-exon	FALSE	canonical	3	35	junction_4	6.61647774709307	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACTGTCATTAGCTCTC	8	True	NA	5	True	AATAAA	-17	NA	43443124	43448064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
ENSMUST00000060895.6	chr11	-	2044	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_7	61.1714853284106	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21321201	21271672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ENSMUST00000060899.9	chr5	-	3724	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	45.4883226773641	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTGAAAAGATACCTGAA	NA	False	NA	NA	False	AATAAA	-17	NA	21906394	21867900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
ENSMUST00000060913.8	chr1	+	1314	2	FSM	ENSMUSG00000047067.8	ENSMUST00000060913.8	1314	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCGAGTTGCTCTTTATG	2855	False	NA	NA	False	AATAAA	-14	NA	92834702	92836157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_92835146_92835286
ENSMUST00000060945.12	chr11	+	10099	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	17.4421185639818	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGCCTCTGCCTCCA	NA	False	NA	NA	False	NA	NA	NA	53241659	53312657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ENSMUST00000060947.14	chr5	-	3597	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	5.18544972870135	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTCTGTCCTTTTCT	NA	False	NA	-3	True	ATTAAA	-17	NA	5564873	5555108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
ENSMUST00000060955.12	chr2	-	3686	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_16	14.3132737727671	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTCCTGATTTGTT	NA	False	NA	0	True	NA	NA	NA	132420153	132371001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ENSMUST00000060987.15	chr10	+	1071	6	FSM	ENSMUSG00000035242.16	ENSMUST00000060987.15	1071	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	2881.68367452085	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662489	80665124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80662740_80664070_80664126_80664129_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUST00000060989.9	chr9	-	10715	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	0	0	0	0	multi-exon	TRUE	canonical	3	333	junction_27	73.2507244219374	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAGAGCAGCAGCCGAT	NA	False	NA	-11	True	AATAAA	-16	NA	42035593	41876015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ENSMUST00000060989.9-1	chr9	-	7192	48	FSM	ENSMUSG00000049313.9	ENSMUST00000060989.9	10715	48	0	3523	0	1496	multi-exon	FALSE	canonical	3	333	junction_27	73.2507244219374	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGGAGTGCATTCTCCT	NA	False	NA	-35	True	AATAAA	-19	NA	42035593	41879538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_41879967_41880939_41881153_41885232_41885426_41887653_41887761_41888731_41888907_41890625_41890791_41891921_41892042_41894201_41894387_41895731_41895832_41896853_41896937_41898761_41898835_41900000_41900106_41900649_41900763_41902607_41902778_41902914_41903042_41903599_41903732_41907466_41907617_41911539_41911696_41912766_41912902_41913849_41913982_41915281_41915414_41917101_41917210_41919474_41919601_41925750_41925871_41929411_41929535_41933631_41933746_41935591_41935766_41942174_41942314_41942964_41943212_41944860_41944953_41946738_41946871_41948344_41948518_41952288_41952375_41952859_41952989_41955202_41955390_41957778_41957958_41968566_41968656_41975010_41975085_41975282_41975401_41979092_41979286_41982367_41982538_41983540_41983643_41993083_41993265_42001240_42001309_42003604_42003767_42010440_42010567_42017723_42017841_42035124
ENSMUST00000060991.6	chr10	-	1556	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	41.1698919114442	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	126906133	126903148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ENSMUST00000060992.6	chr11	+	1773	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	322.410409605866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29668562	29692916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUST00000061047.7	chr1	+	6226	17	FSM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	5.5589876551401	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCTGCTTTTGTCTCAG	NA	False	NA	23	True	AATAAA	-23	NA	106099481	106321980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314252_106317403_106317633_106319858
ENSMUST00000061052.12	chr17	-	1452	13	FSM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	27.2308801424657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTTGTCATTATTCAAA	NA	False	NA	2	True	AATAAA	-38	NA	36220967	36208486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUST00000061070.6	chr11	+	3277	2	FSM	ENSMUSG00000044950.8	ENSMUST00000061070.6	3277	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATTTGTGTGTGTTTC	NA	False	NA	NA	False	AATAAA	-14	NA	43572824	43598018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_43573444_43595360
ENSMUST00000061073.2	chr17	-	957	1	FSM	ENSMUSG00000051639.4	ENSMUST00000061073.2	957	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAGAGCTGTCTGGATT	NA	False	NA	NA	False	NA	NA	NA	6172439	6171482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6171500_6172400
ENSMUST00000061093.7	chr1	+	2834	4	FSM	ENSMUSG00000026614.8	ENSMUST00000061093.7	5836	4	0	3002	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.68178700572909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTATTGAGAGAAGAAAGT	NA	False	NA	NA	False	AATAAA	-30	NA	185187044	185197957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_185187877_185188548_185188627_185194883_185195124_185196273
ENSMUST00000061099.14	chr3	+	2268	8	FSM	ENSMUSG00000048655.18	ENSMUST00000061099.14	887	8	0	-1381	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.55182578445717	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGCTTTAATGTACATA	NA	False	NA	NA	False	AATAAA	-17	NA	55047458	55080356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_55047594_55049661_55049742_55058132_55058244_55058325_55058367_55064453_55064553_55065965_55066020_55070741_55070819_55078685
ENSMUST00000061111.10	chr19	+	3066	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCTCACGGCCTG	NA	False	NA	29	True	AATAAA	-21	NA	42135838	42140142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42137999_42139236
ENSMUST00000061118.11	chr6	+	1922	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	7.6610285226392	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCCTCTCAGAAGCAG	NA	False	NA	NA	False	AATAAA	-36	NA	94477311	94581653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ENSMUST00000061143.15	chr4	-	3351	17	FSM	ENSMUSG00000028849.18	ENSMUST00000061143.15	3351	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_12	56.4079726191254	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150076	126125959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUST00000061156.10	chr16	+	3598	7	FSM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_3	97.2996517065823	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGATCTGGAGCCATGT	NA	False	NA	NA	False	AATAAA	-20	NA	34842797	34929547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUST00000061156.10-0	chr16	+	963	7	FSM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	2	2633	0	-2633	multi-exon	FALSE	canonical	3	1242	junction_3	97.2996517065823	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34842799	34926914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUST00000061158.5	chr2	+	935	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	22.7909756576714	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTTGGAGTTTGTGTG	60	False	NA	37	True	AATAAA	-31	NA	18677233	18681042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
ENSMUST00000061179.12	chr2	+	4967	26	FSM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	34.3579743291132	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCTTCATACAAAAGTA	1545	False	NA	7	True	ATTAAA	-18	NA	37333296	37456449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ENSMUST00000061209.7	chr9	+	3092	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAGAGATGGCTCAG	187	False	NA	NA	False	AATAAA	-13	NA	108337725	108343137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108337817_108340136
ENSMUST00000061209.7-0	chr9	+	1699	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	8	1385	0	-1253	multi-exon	FALSE	canonical	3	208	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCGGTCTCCTTGCT	195	False	NA	10	True	NA	NA	NA	108337733	108341752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108337817_108340136
ENSMUST00000061222.9	chr14	+	4526	1	FSM	ENSMUSG00000043881.10	ENSMUST00000061222.9	4526	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTCCTGGCTTTATG	3209	False	NA	NA	False	AATAAA	-15	NA	79663950	79668476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_79664000_79668500
ENSMUST00000061234.14	chr4	-	4686	3	FSM	ENSMUSG00000050890.16	ENSMUST00000061234.14	4686	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	24	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAAAGTTCTCTTGCTA	3649	False	NA	NA	False	AATAAA	-19	NA	134015206	134002312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134006428_134011556_134011859_134014937
ENSMUST00000061241.8	chr13	-	586	1	FSM	ENSMUSG00000049233.8	ENSMUST00000061241.8	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAACTCCATGCTCTGC	NA	False	NA	NA	False	AATAAA	-1	NA	107551229	107550643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_107550600_107551200
ENSMUST00000061242.8	chr11	-	1800	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	0	0	0	0	multi-exon	FALSE	canonical	3	1704	junction_4	263.796678333902	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1847	False	NA	-4	True	AATAAA	-15	NA	59119096	59102239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ENSMUST00000061244.15	chr5	+	4340	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	33.7925657504724	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGACTGGGAGCTGGGGT	NA	False	NA	27	True	AATAAA	-30	NA	137348370	137372790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ENSMUST00000061251.6	chr5	-	579	2	FSM	ENSMUSG00000072694.9	ENSMUST00000061251.6	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTTGGCGTCCTTCT	750	False	NA	-3	True	NA	NA	NA	114952006	114950853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114951267_114951840
ENSMUST00000061273.12	chr12	+	3650	4	FSM	ENSMUSG00000044548.12	ENSMUST00000061273.12	3650	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	6.97614984548545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTTATTTTTGAGA	1213	False	NA	NA	False	TATAAA	-36	NA	71356657	71366881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363944
ENSMUST00000061279.10	chr18	+	4756	4	FSM	ENSMUSG00000102742.2	ENSMUST00000061279.10	4756	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	101.88337559299	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37888783	37974926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_37891421_37958073_37958133_37966317_37966407_37972955
ENSMUST00000061280.17	chr1	+	5232	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	17.1650808329003	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTGAGGTGTTCT	NA	False	NA	5	True	NA	NA	NA	7159143	7243852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ENSMUST00000061283.15	chr11	-	2396	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	192.168081190846	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTGGTTTTTTGT	4488	False	NA	-3	True	AATAAA	-20	NA	79971817	79937318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ENSMUST00000061295.7	chr15	+	1564	3	FSM	ENSMUSG00000038009.8	ENSMUST00000061295.7	1564	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	3.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACGGAATCCTAGCCCA	4023	False	NA	3	True	AATAAA	-21	NA	98997292	99002618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98997482_98998703_98999657_99002196
ENSMUST00000061299.9	chr5	-	1161	2	FSM	ENSMUSG00000048373.9	ENSMUST00000061299.9	1161	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTGTTTCCTTCTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	44139106	44136201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_44137311_44139054
ENSMUST00000061324.6	chr10	+	1998	5	FSM	ENSMUSG00000019977.17	ENSMUST00000061324.6	1998	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	490.144366488079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGCATGTTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	21171916	21187105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21185641
ENSMUST00000061326.5	chr11	-	1521	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	0	0	0	0	multi-exon	FALSE	canonical	3	5710	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTAATTTTGCTAGTGT	2947	False	NA	NA	False	NA	NA	NA	53321654	53318748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_53319978_53321362
ENSMUST00000061328.6	chr5	-	3900	1	FSM	ENSMUSG00000045314.6	ENSMUST00000061328.6	3900	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTTCTCTTGTCTAT	63	False	NA	-4	True	NA	NA	NA	93192881	93188981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_93189000_93192900
ENSMUST00000061331.14	chr17	-	3116	13	FSM	ENSMUSG00000024095.16	ENSMUST00000061331.14	3116	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	159.429974178843	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTAAGGCTGTTGTTC	3463	False	NA	-4	True	NA	NA	NA	80369763	80336915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356290_80357234_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUST00000061331.14-0	chr17	-	2155	13	FSM	ENSMUSG00000024095.16	ENSMUST00000061331.14	3116	13	107	854	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	159.429974178843	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGTTGTTAACTTA	3570	False	NA	-4	True	AATAAA	-16	NA	80369656	80337769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356290_80357234_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUST00000061350.13	chr16	-	7220	33	FSM	ENSMUSG00000022533.15	ENSMUST00000061350.13	7220	33	0	0	0	0	multi-exon	TRUE	canonical	3	211	junction_18	25.9578986052415	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207348	30131240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30162707_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ENSMUST00000061352.11	chr9	+	1502	11	FSM	ENSMUSG00000032050.19	ENSMUST00000061352.11	1502	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	286.507521716272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTGGTTGTCTTGTAA	NA	False	NA	NA	False	AATAAA	-23	NA	51959570	51986474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51986284
ENSMUST00000061372.7	chr10	+	3086	1	FSM	ENSMUSG00000047514.7	ENSMUST00000061372.7	3086	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	712	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTTCTTAACTTTA	NA	False	NA	NA	False	TATAAA	-41	NA	34158185	34161271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_34158200_34161300
ENSMUST00000061437.5	chr2	+	1535	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	0	0	0	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813277	179818079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ENSMUST00000061437.5-0	chr2	+	1406	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	129	0	0	0	multi-exon	FALSE	canonical	3	1931	junction_6	170.679108342794	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813406	179818079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ENSMUST00000061444.5	chr14	-	2572	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	0	0	0	0	multi-exon	TRUE	canonical	3	1591	junction_2	40	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTCCCAGTTTTCCT	8527	False	NA	NA	False	AAAACA	-24	NA	20443702	20439371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20441529_20441960_20442222_20443548
ENSMUST00000061444.5-1	chr14	-	649	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	0	1923	0	0	multi-exon	FALSE	canonical	3	1591	junction_2	40	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGGTCCTCTGGCATAG	8527	False	NA	-36	True	AATAAA	-14	NA	20443702	20441294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20441529_20441960_20442222_20443548
ENSMUST00000061446.8	chr5	-	2805	8	FSM	ENSMUSG00000043388.9	ENSMUST00000061446.8	2805	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_7	5.20204041600946	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTGGCAAGAATATC	NA	False	NA	-15	True	AATAAA	-17	NA	144698459	144672724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_144674303_144674613_144674727_144680405_144680609_144685466_144685552_144687625_144687793_144689097_144689258_144692020_144692327_144698266
ENSMUST00000061450.7	chr11	+	3281	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	24	1259	0	0	multi-exon	FALSE	canonical	3	30	junction_1	6.92463842261461	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCTCCCTCTTGCTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	115078336	115136590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
ENSMUST00000061468.9	chr7	-	1132	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	127308105	127304149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ENSMUST00000061468.9-1	chr7	-	984	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	148	0	0	0	multi-exon	FALSE	canonical	3	471	junction_4	29.8971570554794	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	127307957	127304149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ENSMUST00000061481.7	chr11	-	1243	5	FSM	ENSMUSG00000049291.7	ENSMUST00000061481.7	1243	5	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	3.57071421427143	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATGCCTCAGAGCTC	NA	False	NA	NA	False	ATTAAA	-9	NA	59266483	59263494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59263997_59264251_59264395_59264991_59265264_59265982_59266146_59266320
ENSMUST00000061483.9	chr2	+	983	1	FSM	ENSMUSG00000049086.9	ENSMUST00000061483.9	983	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTCTTTTTTATTGTT	NA	False	NA	27	True	TATAAA	-23	NA	25596750	25597733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25596800_25597700
ENSMUST00000061491.14	chr2	+	2918	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGAGGCTTCGCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	126394326	126430163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ENSMUST00000061491.14-0	chr2	+	2299	10	FSM	ENSMUSG00000027359.17	ENSMUST00000061491.14	2918	10	619	0	-564	0	multi-exon	FALSE	canonical	3	61	junction_5	10.1592261783666	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACGAGGCTTCGCTGTCT	NA	False	NA	16	True	AATAAA	-16	NA	126394945	126430163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_126395553_126403456_126403667_126406597_126406757_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ENSMUST00000061496.17	chr19	+	3193	13	FSM	ENSMUSG00000024985.21	ENSMUST00000061496.17	3193	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	25.9758167447254	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAGCTGCCGCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	55730700	55921685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUST00000061508.8	chr8	+	1999	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	6316	False	NA	16	True	AGTAAA	-17	NA	3543137	3547208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3543310_3545381
ENSMUST00000061522.8	chr18	-	1451	4	FSM	ENSMUSG00000044595.11	ENSMUST00000061522.8	1451	4	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_2	7.76029781788188	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTCTGCTTGGTAT	NA	False	NA	-8	True	ATTAAA	-14	NA	36899251	36896725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36897541_36898148_36898611_36898945_36899064_36899195
ENSMUST00000061537.12	chr1	+	1194	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	26.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGCCCAGTGTCTTC	NA	False	NA	35	True	AATAAA	-17	NA	157239921	157247806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_157240696_157241313_157241366_157247438
ENSMUST00000061552.15	chr9	-	6996	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	5.42883249163411	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGTGAGAACTGCAGAA	NA	False	NA	-8	True	NA	NA	NA	56325351	56112412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
ENSMUST00000061568.9	chr9	+	6539	11	FSM	ENSMUSG00000043885.15	ENSMUST00000061568.9	6539	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.41039415863879	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAATGTGTGTTTGCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	15621034	15654657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ENSMUST00000061578.9	chr2	+	10970	26	FSM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_8	57.9545477076648	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	NA	False	NA	NA	False	AATAAA	-18	NA	29015003	29072483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ENSMUST00000061586.11	chr7	-	6693	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	5.55777733351102	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCTAAGTTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	35502414	35471767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ENSMUST00000061587.13	chr7	+	1996	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTATTCCCAGACTA	NA	False	NA	NA	False	GATAAA	-15	NA	127368986	127374322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127369389_127372728
ENSMUST00000061601.9	chr10	-	4228	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	3.52252228741084	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTATTTTTTCTGTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	8394589	8080572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ENSMUST00000061611.15	chr1	-	3995	15	FSM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	6.52154983457904	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCCTCATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	190643967	190505075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ENSMUST00000061617.7	chr10	+	5097	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAACAAAAAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	75868487	75879068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75868584_75874067
ENSMUST00000061618.9	chr19	+	4216	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	27.8366043764299	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGATGTCCATCTCT	NA	False	NA	21	True	AATAAA	-11	NA	11889762	11922455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ENSMUST00000061639.10	chr7	-	5223	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	5.03587132480567	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACTGGTTTTCATTTA	9272	False	NA	-5	True	ATTAAA	-15	NA	46658159	46640143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
ENSMUST00000061656.8	chr15	+	9312	38	FSM	ENSMUSG00000050310.10	ENSMUST00000061656.8	9312	38	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_28	25.9902212323754	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGGTGTTGACATT	NA	False	NA	6	True	AATAAA	-21	NA	6737863	6829882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ENSMUST00000061703.10	chr17	+	644	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	10.1242283656583	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAATTATGTA	NA	False	NA	12	True	AATAAA	-15	NA	80597640	80604902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
ENSMUST00000061706.7	chr3	-	1640	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	6.68487097856047	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTGAGATCACTC	NA	False	NA	NA	False	AATAAA	-15	NA	63836893	63822104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
ENSMUST00000061721.6	chr4	+	4739	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_4	12.2395079784914	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTGGTGTGATTTC	1056	False	NA	16	True	ATTAAA	-20	NA	135899704	135923368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ENSMUST00000061755.9	chrX	-	3604	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_3	45.9604109533411	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTGCTCACATTTTT	NA	False	NA	-22	True	AATAAA	-19	NA	37545331	37508383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUST00000061757.4	chr11	+	3852	2	FSM	ENSMUSG00000046311.14	ENSMUST00000061757.4	3852	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAGTAGAGAGTCATT	6586	False	NA	31	True	AATAAA	-40	NA	49105375	49109636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49105482_49105890
ENSMUST00000061767.5	chr7	+	3376	1	FSM	ENSMUSG00000051451.7	ENSMUST00000061767.5	3376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	90091936	90095312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_90091900_90095300
ENSMUST00000061772.11	chr3	-	4343	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGAGGAGCTCCTCCGT	NA	False	NA	NA	False	AATAAA	-14	NA	107240989	107232736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107233621_107237530
ENSMUST00000061772.11-0	chr3	-	3198	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	625	520	53	-520	multi-exon	FALSE	canonical	3	61	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	NA	False	NA	-5	True	AATAAA	-20	NA	107240364	107233256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107233621_107237530
ENSMUST00000061786.6	chr11	+	1597	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	4.45421149026402	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAATTACTGGGGAGAAT	3918	False	NA	NA	False	NA	NA	NA	66915979	66926138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
ENSMUST00000061789.14	chr5	-	3912	7	FSM	ENSMUSG00000045348.17	ENSMUST00000061789.14	3912	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.2836838484589	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAATATATTAAAAGAC	8118	False	NA	-32	True	TTTAAA	-14	NA	137739869	137729174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137730196_137731312_137731423_137731977_137732188_137733101_137734617_137736070_137736418_137737912_137738065_137739312
ENSMUST00000061799.10	chr9	-	2433	7	FSM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	0	864	0	-864	multi-exon	FALSE	canonical	2	7	junction_6	4.22952584681651	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGCTGTGCCCTGTGG	9357	False	NA	NA	False	AATAAA	-21	NA	58220469	58195884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ENSMUST00000061826.3	chr3	-	2028	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTTTCTCGATGTCA	NA	False	NA	1	True	ATTAAA	-41	NA	69506293	69481490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_69483294_69486658_69486725_69506134
ENSMUST00000061833.6	chr9	-	3503	3	FSM	ENSMUSG00000048503.8	ENSMUST00000061833.6	3503	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTTCGTATCTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	43027865	43019944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_43023154_43024755_43024956_43027771
ENSMUST00000061837.11	chr11	+	5188	29	FSM	ENSMUSG00000047284.15	ENSMUST00000061837.11	5188	29	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	16.6703864896494	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCCTCCGCCTCTGTC	NA	False	NA	15	True	AATAAA	-15	NA	69792716	69804646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ENSMUST00000061850.5	chr8	-	3613	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATGGAATTATTCAGC	NA	False	NA	NA	False	NA	NA	NA	26484161	26470631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
ENSMUST00000061850.5-0	chr8	-	2792	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	0	821	0	-821	multi-exon	FALSE	canonical	3	50	junction_4	28.3681159050086	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484161	26471452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
ENSMUST00000061856.6-1	chr19	-	5930	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	0	-2098	0	0	multi-exon	FALSE	canonical	3	55	junction_4	9.97045635866283	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTTTAATGTCTTGG	9003	False	NA	0	True	AATAAA	-19	NA	55087883	55056067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ENSMUST00000061875.8	chr15	+	1748	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	0	1054	0	0	multi-exon	TRUE	canonical	3	450	junction_2	26.9962960422351	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCGTATTTGAGCAGTG	27	False	NA	15	True	AATAAA	-22	NA	25984451	25997513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUST00000061878.5	chr1	-	1558	4	FSM	ENSMUSG00000045259.5	ENSMUST00000061878.5	1558	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1.88561808316413	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGAACTGAGGTTCCTTT	7871	False	NA	NA	False	AATAAA	-26	NA	171188366	171186013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171186549_171187022_171187222_171187309_171187470_171187702
ENSMUST00000061882.10	chr15	-	1917	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	37.1423687391577	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTCTCTCTCTCTGTG	8051	False	NA	0	True	AATAAA	-23	NA	83439936	83430997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
ENSMUST00000061890.8-1	chr6	+	3693	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	361	1519	-91	-1519	multi-exon	TRUE	canonical	3	24	junction_5	6.34388666033558	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATTGCATGTTCCCAAA	NA	False	NA	14	True	AATAAA	-14	NA	47854498	47883900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
ENSMUST00000061891.11	chr2	+	1076	3	FSM	ENSMUSG00000044991.11	ENSMUST00000061891.11	1076	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	20.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACTCAGTCTATTTC	NA	False	NA	27	True	NA	NA	NA	132528850	132592975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_132528902_132533869_132534052_132592132
ENSMUST00000061895.16	chr5	-	2183	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_2	53.5235976948867	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTAGCTTTGTATTTTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	32942990	32893644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ENSMUST00000061923.5	chr8	-	634	2	FSM	ENSMUSG00000045232.5	ENSMUST00000061923.5	634	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCCCCTCCTCTATCCA	2848	False	NA	NA	False	NA	NA	NA	84771629	84769557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84769961_84771398
ENSMUST00000061937.13	chr3	+	2892	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4.91313432432789	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGACTTATTTTGATC	5954	False	NA	NA	False	AATAAA	-15	NA	146156224	146171604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUST00000061938.14	chr11	-	819	2	FSM	ENSMUSG00000057534.14	ENSMUST00000061938.14	819	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCGCGTCATACT	6819	False	NA	0	True	AATAAA	-26	NA	88857743	88855483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_88856100_88857540
ENSMUST00000061986.12	chr4	-	2244	6	FSM	ENSMUSG00000044813.16	ENSMUST00000061986.12	2244	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	2.71293199325011	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATTAGTCGGGTTTTTT	454	False	NA	NA	False	AATAAA	-17	NA	45530330	45423277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45529561
ENSMUST00000061995.10	chr10	-	1583	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCTGTCTATAAAATTGC	NA	False	NA	0	True	AATAAA	-41	NA	128047676	128045776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128047261_128047577
ENSMUST00000062002.6	chr15	-	2739	1	FSM	ENSMUSG00000047591.6	ENSMUST00000062002.6	2739	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGTGTCTGTGGCTTT	NA	False	NA	-2	True	AATAAA	-30	NA	75620077	75617338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75617300_75620100
ENSMUST00000062009.14	chr3	-	3353	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	81.5267887503894	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGGTTTTGGTCTCT	NA	False	NA	-7	True	AATATA	-13	NA	51248065	51162651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ENSMUST00000062041.6	chr12	+	2690	10	FSM	ENSMUSG00000043153.7	ENSMUST00000062041.6	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	4.59468291736341	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTCTCCTACAACAT	NA	False	NA	NA	False	AATAAA	-14	NA	36431517	36739443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698_36526745_36551976_36552072_36571431_36571522_36571957_36572051_36597827_36597960_36738247
ENSMUST00000062047.6	chr2	-	1754	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGACTCTTCTCTGC	NA	False	NA	-1	True	AATAAA	-22	NA	151822139	151811317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_151812845_151821912
ENSMUST00000062067.8	chr5	+	598	4	FSM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	279	0	-70	0	multi-exon	FALSE	canonical	3	258	junction_1	67.9084350839832	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTGTGCACAGAATGGT	NA	False	NA	35	True	AATAAA	-27	NA	138254022	138257657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138254066_138254514_138254596_138256916_138257035_138257301
ENSMUST00000062092.7	chr12	-	2425	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGGAGCCTTTTTTT	9646	False	NA	0	True	ATTAAA	-19	NA	112793009	112783848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112785733_112792468
ENSMUST00000062117.14	chr14	+	4191	2	FSM	ENSMUSG00000051615.15	ENSMUST00000062117.14	4191	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGTGTTTGTTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	120715855	120744606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_120716453_120741012
ENSMUST00000062118.11	chr4	-	3979	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGCGTGG	NA	False	NA	NA	False	NA	NA	NA	133399958	133387697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
ENSMUST00000062118.11-0	chr4	-	2941	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	0	1038	0	829	multi-exon	FALSE	canonical	3	62	junction_1	27.7248384425711	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGGTCTGAATCTTGG	NA	False	NA	-12	True	NA	NA	NA	133399958	133388735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
ENSMUST00000062125.11	chr9	+	3170	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGTTTCTTGCAATCC	4511	False	NA	34	True	ATTAAA	-43	NA	21504017	21507266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21504367_21504445
ENSMUST00000062148.9	chr2	+	912	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATCGGGGTGTTGTAAC	NA	False	NA	101	True	AATAAA	-23	NA	152528954	152529866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152529000_152529900
ENSMUST00000062149.6	chr12	-	4812	9	FSM	ENSMUSG00000020642.14	ENSMUST00000062149.6	4812	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	8.26041009877839	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTTGTGGTTTTGCAG	8872	False	NA	NA	False	NA	NA	NA	26465215	26357032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_26360789_26364018_26364109_26367647_26367796_26370950_26371159_26377276_26377338_26377501_26377607_26389304_26389451_26439392_26439575_26465099
ENSMUST00000062153.12	chr5	-	2249	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	6.39661368746516	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCCTGTGTGCCTTT	NA	False	NA	2	True	NA	NA	NA	124669454	124631142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
ENSMUST00000062172.6	chr11	+	1242	2	FSM	ENSMUSG00000047040.10	ENSMUST00000062172.6	1242	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCACGGTCTTATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	96820219	96826469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96820336_96825343
ENSMUST00000062181.9	chr7	-	2029	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAGAAATAAAGAAATGC	NA	False	NA	NA	False	AGTAAA	-25	NA	29869152	29860693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29862654_29869083
ENSMUST00000062211.4	chr2	+	2628	22	FSM	ENSMUSG00000046338.5	ENSMUST00000062211.4	2628	22	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	53.4925768898164	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUST00000062213.13	chr19	+	2867	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_2	13.7767920794356	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTTCAGTTATTCC	NA	False	NA	7	True	AATAAA	-18	NA	45036112	45044821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ENSMUST00000062242.7	chr18	+	666	1	FSM	ENSMUSG00000048188.7	ENSMUST00000062242.7	666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAAGAACTTTCTGGGT	NA	False	NA	NA	False	AAGAAA	-40	NA	43304223	43304889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_43304200_43304900
ENSMUST00000062264.8	chr1	+	5998	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	0	0	0	0	multi-exon	FALSE	canonical	3	1163	junction_5	186.902306626275	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9304	False	NA	27	True	TATAAA	-18	NA	131838293	131864059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ENSMUST00000062289.11	chr1	-	2487	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	6.36832439151427	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTTCTTATGGTTCAC	NA	False	NA	2	True	AATAAA	-23	NA	33946897	33891132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
ENSMUST00000062317.5	chrX	-	6997	10	FSM	ENSMUSG00000045180.14	ENSMUST00000062317.5	6997	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	17.4384278371675	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151552461	151392987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151440419_151440521_151442259_151444715_151456527_151456660_151478635_151478788_151552281
ENSMUST00000062322.11	chr19	+	5205	14	FSM	ENSMUSG00000055491.15	ENSMUST00000062322.11	5205	14	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	120.971168749579	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCCAGCGTGTCCTTTC	NA	False	NA	3	True	AATAAA	-15	NA	46045022	46061348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ENSMUST00000062350.15	chr5	+	2252	5	FSM	ENSMUSG00000037017.16	ENSMUST00000062350.15	2252	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	46.7566840141599	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGCGTCTCAGGACTGT	NA	False	NA	3	True	AATAAA	-12	NA	138115164	138132475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138115251_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ENSMUST00000062356.7	chr4	+	1605	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	8029	junction_1	0	7846	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTGGTCTTCTGGGGT	NA	False	NA	24	True	AATAAA	-24	NA	129407373	129409778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129407710_129408509
ENSMUST00000062368.13	chr9	-	3806	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_18	79.7176537599273	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109930155	109913387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ENSMUST00000062369.14	chr17	+	3625	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	68.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTTGTATTTGTGTT	NA	False	NA	NA	False	AAAACA	-43	NA	69690313	69697745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_69690416_69692415_69692500_69694306
ENSMUST00000062370.9	chr12	-	2979	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGGGTATCTTGTCTT	6410	False	NA	-2	True	AATAAA	-17	NA	75716311	75677369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_75680283_75716245
ENSMUST00000062389.6	chr19	+	1566	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	19.6580136331217	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCCAAAATGCC	NA	False	NA	-6	True	AATAAA	-6	NA	36387147	36433592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ENSMUST00000062405.8	chr11	-	1611	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTTGCTTTTAGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	59855770	59854006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59855193_59855345
ENSMUST00000062429.7	chr6	-	1984	1	FSM	ENSMUSG00000043024.7	ENSMUST00000062429.7	1984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1058	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAATCTGCCTTCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	108542549	108540565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_108540600_108542500
ENSMUST00000062483.15	chr1	-	6637	14	FSM	ENSMUSG00000048402.15	ENSMUST00000062483.15	6637	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_11	11.3908506833309	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTTGTTGATCTGCTT	1229	False	NA	-3	True	ATTAAA	-17	NA	118981349	118761861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118818025_118818132_118929769_118929937_118981031
ENSMUST00000062519.14	chr17	+	7462	9	FSM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	7.89679523604354	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTGCCTCATATTTT	1280	False	NA	NA	False	AATAAA	-24	NA	26934623	26995609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ENSMUST00000062519.14-0	chr17	+	5969	9	FSM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	0	1493	0	-1493	multi-exon	FALSE	canonical	3	21	junction_1	7.89679523604354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATGTCAAGAATGGATG	1280	False	NA	NA	False	AATAAA	-18	NA	26934623	26994116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ENSMUST00000062525.11	chr1	-	2492	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	11.4661337085446	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	4717	False	NA	-3	True	AATAAA	-17	NA	39616486	39590376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ENSMUST00000062530.5	chr11	+	1225	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	0	685	0	0	multi-exon	FALSE	canonical	3	4	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGTGGCTACAATTGA	NA	False	NA	NA	False	ATTAAA	-18	NA	103024170	103030017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_103024284_103024860_103024968_103029012
ENSMUST00000062542.5	chrX	+	1572	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCAGCAGTGTTTGTTC	NA	False	NA	13	True	AATAAA	-18	NA	57956820	57965664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_57956922_57964193
ENSMUST00000062572.3	chr5	-	2293	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTTCTATCTGGG	NA	False	NA	-2	True	AATAAA	-13	NA	135280084	135277791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135277800_135280100
ENSMUST00000062601.14	chr3	-	624	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_4	3512.03875085398	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTATCTGTGATTTG	NA	False	NA	-11	True	AATAAA	-20	NA	130523986	130520479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
ENSMUST00000062613.12	chr8	-	2463	3	FSM	ENSMUSG00000050052.13	ENSMUST00000062613.12	2463	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	12.5	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4780	False	NA	-4	True	ATTAAA	-18	NA	14024777	14002007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_14004136_14005719_14005818_14024540
ENSMUST00000062626.4	chr6	+	3007	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATGACTTTTTCTGAA	NA	False	NA	9	True	NA	NA	NA	59185854	59189018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_59186167_59186323
ENSMUST00000062658.15	chr13	-	3796	14	FSM	ENSMUSG00000021156.18	ENSMUST00000062658.15	3796	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	37.5302639220559	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCTTGTCAGTAAGC	NA	False	NA	-3	True	AATAAA	-17	NA	9815196	9734873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9815090
ENSMUST00000062672.7	chr2	-	1042	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGGATCCTGCATGGA	2317	False	NA	-15	True	AATAAA	-18	NA	3333680	3329985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_3330911_3333563
ENSMUST00000062674.7	chr10	+	572	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	7729	junction_2	373	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATAAAGACTGGTTTTGGT	6534	False	NA	3	True	NA	NA	NA	80128478	80129921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80128695_80129475_80129711_80129800
ENSMUST00000062677.12	chr11	-	972	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	485	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7834	False	NA	-5	True	ATTAAA	-17	NA	60769613	60755277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60756175_60769538
ENSMUST00000062678.11	chr10	-	1984	13	FSM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	71.0948115000119	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGCTTCTCCCATTT	NA	False	NA	-19	True	AATAAA	-19	NA	78248877	78236219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ENSMUST00000062684.9	chr4	+	4670	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_2	4.5	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTCTCTTCTCTTTCTTT	27	False	NA	18	True	AATAAA	-19	NA	15265830	15286753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_15266750_15281006_15281163_15283158
ENSMUST00000062684.9-0	chr4	+	3311	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	-53	1412	-53	-1412	multi-exon	FALSE	canonical	3	428	junction_2	4.5	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGATTGACAATTTCTA	3	True	NA	8	True	AATAAA	-19	NA	15265777	15285341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_15266750_15281006_15281163_15283158
ENSMUST00000062686.11	chr8	+	3525	12	FSM	ENSMUSG00000002948.20	ENSMUST00000062686.11	3525	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	114.000217485656	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288760	4297897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ENSMUST00000062694.16	chr17	+	3548	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_9	36.7805643969117	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGGTTTATT	5077	False	NA	12	True	AATAAA	-19	NA	28910315	28967379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ENSMUST00000062708.7	chr7	-	1905	10	FSM	ENSMUSG00000036864.17	ENSMUST00000062708.7	1905	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	15.3365536070921	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTCACCTTCCAGGTCC	NA	False	NA	NA	False	ACTAAA	-26	NA	30249090	30238939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30239004_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031
ENSMUST00000062709.4	chr11	+	1351	2	FSM	ENSMUSG00000049604.4	ENSMUST00000062709.4	2206	2	0	855	0	-855	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACAGTTTCCTCTCAGA	3944	False	NA	NA	False	AATAAA	-18	NA	96085141	96087418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96085873_96086798
ENSMUST00000062723.14	chr9	-	4483	11	FSM	ENSMUSG00000032561.16	ENSMUST00000062723.14	4483	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	1.79164728671689	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTTTCATTTGTAAG	NA	False	NA	NA	False	AATAAA	-9	NA	104214927	104165449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_104168729_104178014_104178185_104184083_104184188_104186608_104186692_104191506_104191640_104193424_104193518_104197172_104197272_104201250_104201404_104201841_104201929_104204079_104204176_104214741
ENSMUST00000062740.15	chr12	-	3066	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTTCTGTTGGTTTCC	NA	False	NA	NA	False	AATAAA	-32	NA	30961570	30943324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ENSMUST00000062740.15-0	chr12	-	1440	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	-18	1644	0	906	multi-exon	FALSE	canonical	3	836	junction_3	311.492279198057	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCAGTGTCTGCCTGCT	NA	False	NA	NA	False	AATACA	-11	NA	30961588	30944968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ENSMUST00000062753.3	chr19	+	1677	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGTATCAGTGACTAA	9314	False	NA	26	True	AATAAA	-19	NA	18690556	18695792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_18691024_18694582
ENSMUST00000062755.10	chr6	+	1764	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	6.37704215656966	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGATCTGATTCTAAT	NA	False	NA	31	True	ATTAAA	-32	NA	134617902	134688150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
ENSMUST00000062765.14	chr7	-	2550	5	FSM	ENSMUSG00000030443.17	ENSMUST00000062765.14	2550	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.61248608016091	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGATTATTTTAATCAT	NA	False	NA	NA	False	AATAAA	-22	NA	6334284	6318658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_6320779_6326645_6326742_6328451_6328579_6332253_6332316_6334139
ENSMUST00000062784.8	chr10	-	801	2	FSM	ENSMUSG00000046031.8	ENSMUST00000062784.8	1094	2	293	0	293	0	multi-exon	FALSE	canonical	3	41	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTTCTCCCAAGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	34003687	34002062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_34002563_34003386
ENSMUST00000062789.15	chr14	-	2444	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	13.9737362978714	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTATCCATTCCTTT	NA	False	NA	1	True	NA	NA	NA	77274081	77261639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
ENSMUST00000062802.5	chr4	+	465	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	3	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTGGAATCCTCAATTG	-15	True	NA	22	True	ATTAAA	-22	NA	32800252	32801383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_32800336_32800609_32800751_32801142
ENSMUST00000062802.5-0	chr4	+	1320	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	29	-884	0	708	multi-exon	FALSE	canonical	3	270	junction_2	3	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCATCATTAAGGAGCAT	14	True	NA	NA	False	NA	NA	NA	32800281	32802267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_32800336_32800609_32800751_32801142
ENSMUST00000062804.8	chr12	+	3358	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	14.8022781360346	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGTGTGGTGGCATCT	NA	False	NA	NA	False	TATAAA	-13	NA	77285838	77523112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ENSMUST00000062831.16	chr7	+	3578	23	FSM	ENSMUSG00000030400.18	ENSMUST00000062831.16	3578	23	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_1	20.1272809394744	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115934	19129619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19115985_19116203_19116304_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
ENSMUST00000062844.11	chr11	-	3057	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGTATAATAAGTGATAC	3969	False	NA	-28	True	AATAAA	-21	NA	22810101	22784746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_22787196_22809493
ENSMUST00000062844.11-0	chr11	-	2659	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	398	0	-158	0	multi-exon	FALSE	canonical	3	288	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACGTATAATAAGTGATAC	4367	False	NA	-28	True	AATAAA	-21	NA	22809703	22784746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_22787196_22809493
ENSMUST00000062855.15	chr10	-	2562	14	FSM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	62.0923153160017	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390925	79376078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ENSMUST00000062861.15	chr14	-	2338	16	FSM	ENSMUSG00000040472.16	ENSMUST00000062861.15	2338	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	137.773727539034	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959633	55953333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959509
ENSMUST00000062883.7	chr10	+	3262	14	FSM	ENSMUSG00000043259.16	ENSMUST00000062883.7	3262	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	8.57062549069641	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTATGTTGAAAGCAC	9944	False	NA	NA	False	AATAAA	-16	NA	70276755	70394561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUST00000062893.12	chr3	+	7910	46	FSM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	46.2867818371455	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAAGCCTTGTTGTGTG	NA	False	NA	101	True	TTTAAA	-43	NA	134918297	134979372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ENSMUST00000062904.11	chr4	+	3151	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGGCTATGTGGCTT	9070	False	NA	NA	False	NA	NA	NA	152018147	152066594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUST00000062904.11-0	chr4	+	2193	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	48	910	0	0	multi-exon	FALSE	canonical	3	755	junction_7	69.5258864660415	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGAAACTAGTCTCTT	9118	False	NA	33	True	TATAAA	-25	NA	152018195	152065684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUST00000062915.9	chr7	+	1936	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	0	2253	0	-2253	multi-exon	FALSE	canonical	3	81	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTGTTGTTGTTTTC	NA	False	NA	8	True	AGTAAA	-11	NA	79882612	79889556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79882954_79887961
ENSMUST00000062957.8	chr12	-	3446	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_10	15.649378488982	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTTTTGTCTTTCA	NA	False	NA	-1	True	AATAAA	-21	NA	100487085	100267028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ENSMUST00000062962.12	chr5	+	3088	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACATTTTTTTAAATGAA	6678	False	NA	54	True	AATAAA	-14	NA	30805276	30817073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ENSMUST00000062962.12-0	chr5	+	1965	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	20	1103	0	382	multi-exon	FALSE	canonical	3	97	junction_4	8.49470423263812	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGACTTCCTTGATG	6698	False	NA	19	True	NA	NA	NA	30805296	30815970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ENSMUST00000062991.9	chr18	-	4038	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGAGTTCTCTCATGA	NA	False	NA	-2	True	ATTAAA	-14	NA	61859394	61845494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ENSMUST00000062991.9-0	chr18	-	1453	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	-2	2587	0	0	multi-exon	FALSE	canonical	3	248	junction_1	10.9645894689324	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTTACAGTTTATAAT	NA	False	NA	NA	False	AATAAA	-23	NA	61859396	61848081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ENSMUST00000063040.12	chr4	-	436	3	FSM	ENSMUSG00000050608.12	ENSMUST00000063040.12	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	73	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCAAGCAATGCCTTT	3209	False	NA	-20	True	AATAAA	-16	NA	138833270	138831101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138831324_138832300_138832411_138833166
ENSMUST00000063042.11	chr9	+	2396	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	39.3725228497687	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	24	True	AATAAA	-15	NA	114230143	114303445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ENSMUST00000063084.16	chr11	+	2129	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_4	35.2801289680182	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTCTGTGATTTCTA	NA	False	NA	34	True	ATTAAA	-17	NA	5470658	5475893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ENSMUST00000063089.12	chr16	-	3813	6	FSM	ENSMUSG00000050312.13	ENSMUST00000063089.12	3813	6	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	5.74804314527997	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607140	62552806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596995_62606150_62606261_62607033
ENSMUST00000063091.13	chr10	+	3562	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39245759	39441377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUST00000063091.13-0	chr10	+	2604	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	0	958	0	0	multi-exon	FALSE	canonical	3	31	junction_8	31.8009712925239	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39245759	39440419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUST00000063116.10	chr5	-	1935	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGGGTTTAGTTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	37981927	37977828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_37979045_37981208
ENSMUST00000063117.10	chr12	+	1656	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_5	40.5555175037873	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	13	True	NA	NA	NA	87194491	87211497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUST00000063138.8	chr10	+	2140	2	FSM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAAGCTTCTCTATTC	NA	False	NA	NA	False	AATAAA	-23	NA	55983012	55992976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_55983126_55990949
ENSMUST00000063169.10	chr14	-	1314	2	FSM	ENSMUSG00000048281.10	ENSMUST00000063169.10	1314	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTCTAGCTTCTCTTAC	667	False	NA	NA	False	ATTAAA	-13	NA	62530412	62513679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_62514558_62529976
ENSMUST00000063199.13	chr1	-	2947	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCTTGTATGACTTCA	NA	False	NA	-31	True	AATAAA	-38	NA	156767101	156635685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUST00000063199.13-0	chr1	-	2310	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	-77	714	0	0	multi-exon	FALSE	canonical	3	93	junction_5	55.0008310186526	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTAACTTTGTACT	NA	False	NA	-6	True	AATAAA	-16	NA	156767178	156636399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUST00000063249.9	chr7	+	2155	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	31.1527862919194	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTTTCTCTCTTAGGAG	NA	False	NA	7	True	AATAAA	-19	NA	24246574	24272863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUST00000063262.11	chr5	-	2254	6	FSM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	25.9584283037321	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGATCTTTGTTTG	1752	False	NA	-9	True	AATAAA	-10	NA	138618002	138604381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614822_138615316_138615430_138617870
ENSMUST00000063272.13-1	chr5	+	2437	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	0	1519	0	0	multi-exon	FALSE	canonical	3	71	junction_10	21.559220765139	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTTTGAACATTGAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	108777697	108795129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUST00000063339.14	chr15	-	2718	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	9.19183310979738	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGTGTGGATCCCTC	NA	False	NA	-2	True	AATAAA	-14	NA	102154935	102143374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
ENSMUST00000063340.12	chrX	+	795	4	FSM	ENSMUSG00000051827.12	ENSMUST00000063340.12	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	56.8174464598878	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACATTTGTTTTGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	36508628	36513339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36508740_36508901_36509314_36510828_36510875_36513113
ENSMUST00000063380.11	chr1	+	2896	13	FSM	ENSMUSG00000026159.14	ENSMUST00000063380.11	2896	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAGTAATGCCTCGTT	NA	False	NA	-88	True	AATGAA	-15	NA	82817391	82874000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ENSMUST00000063380.11-0	chr1	+	2480	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000063380.11	2896	13	-188	604	0	0	multi-exon	FALSE	canonical	3	56	junction_7	129.211390106807	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTTTGTGTTCTTG	NA	False	NA	15	True	AATAAA	-15	NA	82817203	82873396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860964_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ENSMUST00000063401.10	chr8	-	3977	21	FSM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	16.2802794816305	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAACTACTACCCTACT	NA	False	NA	NA	False	AAAAAG	-16	NA	23196605	23149783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ENSMUST00000063414.9	chr15	+	3229	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	8.71779788708135	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTTTTATTGCATT	NA	False	NA	8	True	AATAAA	-17	NA	86098659	86382704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUST00000063417.11	chr17	-	2288	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_3	505.274425335341	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514734	80507508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUST00000063445.13	chr12	+	2620	13	FSM	ENSMUSG00000051890.14	ENSMUST00000063445.13	2620	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	3.37474278855276	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCAGTGTGAATTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	69288605	69331406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69288788_69297526_69297598_69298144_69298263_69298701_69298821_69300465_69300545_69302948_69303033_69304796_69304881_69305342_69305402_69306274_69306388_69309922_69309996_69315015_69315101_69316599_69316653_69329906
ENSMUST00000063507.11	chrX	-	4227	28	FSM	ENSMUSG00000031139.17	ENSMUST00000063507.11	4227	28	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_27	54.2283947104	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224449	59101315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
ENSMUST00000063517.6	chr15	+	3096	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	25.9147909289056	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99024436	99111096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUST00000063520.15	chr16	+	3557	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	525.255652040033	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATCTGTCTGTAACT	NA	False	NA	17	True	AATAAA	-17	NA	43960248	43982835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUST00000063542.8	chr16	+	3498	4	FSM	ENSMUSG00000022698.18	ENSMUST00000063542.8	2136	4	-62	-1300	0	0	multi-exon	FALSE	canonical	3	8	junction_2	621.795965106097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCTGTCTGTAACTGT	NA	False	NA	19	True	AATAAA	-19	NA	43960192	43982837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43960475_43976772_43976910_43978242_43978310_43979825
ENSMUST00000063562.9	chr14	+	2346	19	FSM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	52	617	0	-617	multi-exon	FALSE	canonical	3	187	junction_10	24.3726850752595	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGTCTCACCTGCTTGG	NA	False	NA	NA	False	AATAAA	-19	NA	61022073	61141061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ENSMUST00000063574.7	chr17	+	1192	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	34.9685573050991	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUST00000063577.10	chrX	-	6057	25	FSM	ENSMUSG00000031310.17	ENSMUST00000063577.10	6057	25	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_24	27.5416036307902	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTCTCTGGGGGA	NA	False	NA	-2	True	AATAAA	-14	NA	100464455	100447989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463751
ENSMUST00000063605.15	chr16	-	5463	2	FSM	ENSMUSG00000046962.17	ENSMUST00000063605.15	5463	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCAGTTGTGGTTTTT	NA	False	NA	0	True	AATAAA	-21	NA	97763815	97749032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97754294_97763613
ENSMUST00000063607.12	chr7	-	4884	5	FSM	ENSMUSG00000030980.18	ENSMUST00000063607.12	4884	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	184.092877374438	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCATGCCTAAAGCACAAA	NA	False	NA	-32	True	AATAAA	-1	NA	118455224	118441459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118452111_118452564_118454845
ENSMUST00000063635.15	chr5	-	3700	15	FSM	ENSMUSG00000029576.18	ENSMUST00000063635.15	3700	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	8.41069532906569	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATGTAGGATCTGCA	NA	False	NA	-5	True	AATAAA	-21	NA	142536853	142470593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ENSMUST00000063641.11	chr16	+	517	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	48.3482735529983	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTGCATTCTCTCT	NA	False	NA	26	True	AATAAA	-16	NA	92098173	92109929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
ENSMUST00000063650.10	chr4	-	4016	12	FSM	ENSMUSG00000039137.19	ENSMUST00000063650.10	4016	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	10.7826000023147	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCCAGTGTTCTATGCT	4518	False	NA	-7	True	AATAAA	-18	NA	63414188	63333146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ENSMUST00000063661.13	chr16	-	3896	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_14	86.121532541792	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGCAGTTCTCTATTTA	NA	False	NA	-11	True	AATATA	-17	NA	43959559	43906007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ENSMUST00000063669.8	chr7	-	2644	12	FSM	ENSMUSG00000030986.14	ENSMUST00000063669.8	2644	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	113.27630229292	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTACTATTCCATGCT	NA	False	NA	-7	True	AATAAA	-22	NA	133384455	133322838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133384396
ENSMUST00000063672.10	chr4	-	2804	7	FSM	ENSMUSG00000039137.19	ENSMUST00000063672.10	2804	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	9.97357620025145	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAGAACTCCATAAT	4478	False	NA	NA	False	AATAAA	-19	NA	63414228	63349669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ENSMUST00000063682.12	chr2	+	669	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	210	56	0	0	multi-exon	FALSE	canonical	3	676	junction_1	80.8469060769936	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTCTCTATATTATTAT	4052	False	NA	12	True	ATTAAA	-15	NA	170353364	170360987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ENSMUST00000063683.8	chr17	-	2312	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	227.371941980535	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACACACTGTTCCATTCA	NA	False	NA	-19	True	AATAAA	-19	NA	7228555	7222409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
ENSMUST00000063694.10	chr7	-	6396	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGCCTCGGTTGAG	NA	False	NA	-13	True	AATAAA	-16	NA	63588663	63536098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_63541546_63587714
ENSMUST00000063694.10-0	chr7	-	1435	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	0	4961	0	71	multi-exon	FALSE	canonical	3	56	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGATTCAGCGGTGTTG	NA	False	NA	NA	False	AATACA	-13	NA	63588663	63541059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_63541546_63587714
ENSMUST00000063704.8	chr4	+	1244	3	FSM	ENSMUSG00000078496.10	ENSMUST00000063704.8	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	63.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGACTGTGACAAATGC	NA	False	NA	NA	False	NA	NA	NA	147592056	147597877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_147592098_147595209_147595337_147596801
ENSMUST00000063710.13	chr2	-	5685	6	FSM	ENSMUSG00000052056.15	ENSMUST00000063710.13	5685	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	10.6695829346793	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCGTGGTTTTCATT	NA	False	NA	0	True	AATATA	-20	NA	169973140	169950562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169972967
ENSMUST00000063717.14	chr3	+	3327	19	FSM	ENSMUSG00000058388.15	ENSMUST00000063717.14	3327	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	13.8399136513399	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTTTCTAGGCTTT	NA	False	NA	6	True	AATAAA	-16	NA	103875573	103914804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ENSMUST00000063719.15	chr1	+	1806	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	45.0759359303831	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTAAGCAAAACCCAGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	135945704	135963080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ENSMUST00000063747.12	chr15	-	5440	36	FSM	ENSMUSG00000022568.18	ENSMUST00000063747.12	5440	36	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_30	52.1302607094253	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941603	75919006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ENSMUST00000063782.12	chr9	-	1417	7	FSM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	-25	270	0	0	multi-exon	FALSE	canonical	3	54	junction_4	50.0954644209988	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6364	False	NA	-20	True	ATTAAA	-21	NA	35179101	35128530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
ENSMUST00000063788.8	chr8	-	3081	9	FSM	ENSMUSG00000002346.17	ENSMUST00000063788.8	3081	9	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	10.6389614154766	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTCTTACTTCTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	70664906	70636989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70637876_70637941_70639427_70640949_70641102_70641482_70641600_70642060_70642228_70642712_70642739_70644510_70644617_70646773_70646887_70664877
ENSMUST00000063814.15	chr18	-	2289	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	0	0	0	0	multi-exon	FALSE	canonical	3	1055	junction_1	137.188434886716	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38472056	38460610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ENSMUST00000063816.6	chr4	-	2830	2	FSM	ENSMUSG00000052117.6	ENSMUST00000063816.6	2830	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTTCTTCTCAATT	-3	True	NA	NA	False	NA	NA	NA	57916297	57908482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_57910612_57915596
ENSMUST00000063817.7	chr17	+	753	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	562.646592009585	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	AATAAA	-22	NA	79223945	79227735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUST00000063838.11	chr15	-	3797	12	FSM	ENSMUSG00000022378.15	ENSMUST00000063838.11	3797	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_11	317.474070002523	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTCATTTGTATATAT	NA	False	NA	-4	True	NA	NA	NA	63932297	63800945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63932043
ENSMUST00000063839.6	chr4	+	3327	4	FSM	ENSMUSG00000052137.12	ENSMUST00000063839.6	3327	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	21.6692306175267	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATTGCTCTTGA	56	False	NA	-16	True	NA	NA	NA	12089440	12096243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_12089524_12089662_12089728_12092522_12092573_12093114
ENSMUST00000063854.7	chr6	+	4874	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTGTGGAATTACTTT	9660	False	NA	12	True	AATAAA	-21	NA	100810582	100846895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ENSMUST00000063854.7-0	chr6	+	2946	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	0	1928	0	384	multi-exon	FALSE	canonical	3	518	junction_7	39.1144155011934	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATTGGAGTACATTTT	9660	False	NA	19	True	AATAAA	-13	NA	100810582	100844967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ENSMUST00000063879.13	chr10	-	1654	6	FSM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	6.89927532426414	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGTTGATTTTTCAA	NA	False	NA	0	True	TATAAA	-22	NA	79369630	79362263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
ENSMUST00000063882.12	chr5	+	4116	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	17.7721692542019	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGTGGGGTCTTTGT	NA	False	NA	15	True	AATAAA	-26	NA	73648375	73718133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ENSMUST00000063886.4	chr2	+	5686	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATGCAGTTTTTCT	NA	False	NA	15	True	AATAAA	-18	NA	48704120	48793281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUST00000063886.4-0	chr2	+	2872	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	0	2814	0	207	multi-exon	FALSE	canonical	3	42	junction_9	8.77268487978452	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAAATTCACTGTGTTA	NA	False	NA	NA	False	AATAAA	-25	NA	48704120	48790467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUST00000063888.5	chr12	+	1982	11	FSM	ENSMUSG00000052160.8	ENSMUST00000063888.5	1982	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	2.92574776766556	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTGTTCTCTCT	4280	False	NA	NA	False	AATAAA	-45	NA	112727088	112735424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112727218_112728959_112729044_112729830_112729998_112730396_112730581_112730881_112731003_112731431_112731560_112733136_112733338_112733931_112734072_112734187_112734354_112734458_112734556_112734859
ENSMUST00000063891.2	chr2	+	1097	1	FSM	ENSMUSG00000052368.3	ENSMUST00000063891.2	1097	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTATTTCTCCAT	NA	False	NA	2	True	AATAAA	-14	NA	168862189	168863286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_168862200_168863300
ENSMUST00000063976.9	chr7	+	3366	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCTTCAATTTTAT	3233	False	NA	9	True	AATAAA	-14	NA	18962258	18981793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18962510_18978678
ENSMUST00000063982.7	chr1	-	6915	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGCGTTGAGTCTTTCT	NA	False	NA	NA	False	ATTAAA	-22	NA	64776910	64769716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_64776013_64776291
ENSMUST00000063982.7-0	chr1	-	3057	2	FSM	ENSMUSG00000045005.10	ENSMUST00000063982.7	6915	2	2	3856	0	55	multi-exon	FALSE	canonical	3	55	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTTTTTTTTTTTAT	NA	False	NA	-5	True	AATATA	-14	NA	64776908	64773572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_64776013_64776291
ENSMUST00000063989.7	chr18	-	3211	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTGTTTTCTTAA	362	False	NA	NA	False	CATAAA	-17	NA	5334439	5210028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
ENSMUST00000063989.7-0	chr18	-	2839	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	26	346	0	-251	multi-exon	FALSE	canonical	3	10	junction_4	5.40832691319598	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGTAGAGAAAATTGT	388	False	NA	NA	False	AATAAA	-24	NA	5334413	5210374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
ENSMUST00000064013.4	chr6	-	543	2	FSM	ENSMUSG00000052241.4	ENSMUST00000064013.4	543	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGTCCCAACTGCACTG	NA	False	NA	NA	False	NA	NA	NA	47431254	47430709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47430884_47430885
ENSMUST00000064050.5	chr10	-	1096	3	FSM	ENSMUSG00000020083.14	ENSMUST00000064050.5	1096	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	60.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	False	NA	-12	True	AATAAA	-19	NA	61946792	61943990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_61944903_61945662_61945790_61946735
ENSMUST00000064062.13	chr6	+	2728	15	FSM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_4	225.763692603481	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAAACTGAGTACTC	NA	False	NA	-1	True	AATAAA	-6	NA	71808314	71852228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUST00000064067.9	chr15	-	3281	2	FSM	ENSMUSG00000036061.11	ENSMUST00000064067.9	3281	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTCCCCCCTGAGTT	NA	False	NA	-18	True	NA	NA	NA	103066429	103061733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103064629_103066043
ENSMUST00000064091.12	chr1	-	10874	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_24	12.095832819514	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCGTTTCAAGGTTCT	NA	False	NA	0	True	AATAAA	-21	NA	119765343	119580196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ENSMUST00000064091.12-0	chr1	-	5237	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	60	5577	60	0	multi-exon	FALSE	canonical	3	29	junction_24	12.095832819514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAGTCCCCCTATTC	NA	False	NA	NA	False	AATAAA	-15	NA	119765283	119585773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ENSMUST00000064099.8	chr7	-	3862	24	FSM	ENSMUSG00000052296.8	ENSMUST00000064099.8	3862	24	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_23	30.5598053220771	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4662018	4634493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ENSMUST00000064104.13	chr11	-	3069	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_4	66.5263857428013	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678501	54608281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ENSMUST00000064129.14	chr4	+	2356	18	FSM	ENSMUSG00000028555.16	ENSMUST00000064129.14	2356	18	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_14	2.90923835738311	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTTCATATACATTT	NA	False	NA	NA	False	NA	NA	NA	109264283	109301942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_109264407_109273183_109273289_109278489_109278622_109279642_109279720_109280071_109280140_109283497_109283563_109285327_109285428_109286083_109286150_109288052_109288162_109288587_109288656_109288735_109288796_109290185_109290348_109295945_109296038_109297718_109297840_109299423_109299536_109299893_109300009_109300704_109300822_109301278
ENSMUST00000064139.8	chr4	+	3159	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	17.8616908494129	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTGGTGCCTGAGCTGT	NA	False	NA	13	True	AATAAA	-23	NA	105014543	105089961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ENSMUST00000064141.12	chr2	+	1905	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	54.6553207074357	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCTTTATGACTATCC	NA	False	NA	12	True	AATAAA	-21	NA	70886124	70929486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
ENSMUST00000064162.11	chr14	+	1576	5	FSM	ENSMUSG00000052334.12	ENSMUST00000064162.11	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	25.043711785596	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTTAAGAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	41765951	41825778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_41766287_41818127_41818291_41819245_41819378_41820058_41820240_41825013
ENSMUST00000064166.5	chr15	-	2144	2	FSM	ENSMUSG00000045281.6	ENSMUST00000064166.5	2144	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGCCAACAGCCCAAG	NA	False	NA	NA	False	AATAAA	-19	NA	73579354	73566452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73568412_73579169
ENSMUST00000064167.8	chr4	-	1955	4	FSM	ENSMUSG00000028557.11	ENSMUST00000064167.8	1955	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	102.557301056531	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGATGAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	109334180	109310095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_109311620_109314094_109314265_109333306_109333459_109334071
ENSMUST00000064187.12	chr11	+	2452	10	FSM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	13.6055544213057	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGCCTCCTCCAGG	6290	False	NA	29	True	NA	NA	NA	98632636	98659832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
ENSMUST00000064190.13	chr11	+	7348	6	FSM	ENSMUSG00000062115.16	ENSMUST00000064190.13	7348	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.67097875150313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCGGCCTGTGGATG	NA	False	NA	NA	False	AATAAA	-20	NA	59995838	60090021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59996221_60031066_60031197_60075921_60081449_60084764_60084859_60088614_60088665_60088856
ENSMUST00000064196.5	chrX	+	2583	1	FSM	ENSMUSG00000052364.5	ENSMUST00000064196.5	2583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCGTTGTCTCATAATCTA	NA	False	NA	NA	False	AATACA	-25	NA	8758620	8761203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_8758600_8761200
ENSMUST00000064200.9	chr15	+	1623	8	FSM	ENSMUSG00000052369.9	ENSMUST00000064200.9	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	38.9117263685331	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7681	False	NA	11	True	AATAAA	-17	NA	97862110	97868156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_97862385_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ENSMUST00000064230.16	chr14	+	2387	13	FSM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_11	8.01171017948103	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376316	30413274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ENSMUST00000064231.8	chr7	-	1780	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	4.4	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTCTTTTCTCTCTCC	NA	False	NA	-1	True	AATAAA	-20	NA	98887826	98868290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
ENSMUST00000064234.7	chr17	-	3164	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGAGCGTTTATTGAGA	NA	False	NA	1	True	AATAAA	-20	NA	7050183	7005439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ENSMUST00000064234.7-0	chr17	-	2926	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	0	238	0	-238	multi-exon	FALSE	canonical	3	786	junction_7	74.9893973987138	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTTGTGTCTGATTGCA	NA	False	NA	-5	True	AATAAA	-10	NA	7050183	7005677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ENSMUST00000064240.14	chr12	-	3937	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTGGCTCGTGTATT	NA	False	NA	NA	False	AGTAAA	-31	NA	31549554	31534827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ENSMUST00000064240.14-0	chr12	-	1865	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	0	2072	0	0	multi-exon	FALSE	canonical	3	23	junction_4	65.6310901935965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATTTTTATGTG	NA	False	NA	-20	True	ATTAAA	-16	NA	31549554	31536899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ENSMUST00000064244.11	chr2	-	2281	8	FSM	ENSMUSG00000052406.15	ENSMUST00000064244.11	2281	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGTGTGGAAGTTCAT	NA	False	NA	-6	True	AATAAA	-14	NA	26854398	26843574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUST00000064272.10	chr1	+	1998	8	FSM	ENSMUSG00000052423.16	ENSMUST00000064272.10	1998	8	0	0	0	0	multi-exon	FALSE	non_canonical	1	74	junction_2	53.1005976368228	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTGTGATTTCTGCA	NA	False	NA	15	True	AATAAA	-15	NA	171097897	171104468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171097985_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ENSMUST00000064297.5	chr11	-	2104	11	FSM	ENSMUSG00000036391.17	ENSMUST00000064297.5	2104	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	12.9015502944414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTTTTCAG	3773	False	NA	NA	False	AATAAA	-14	NA	51647265	51612516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ENSMUST00000064314.10	chr8	-	1256	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	0	0	0	0	multi-exon	FALSE	canonical	1	664	junction_3	477.58303524681	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
ENSMUST00000064364.3	chr11	-	2906	8	FSM	ENSMUSG00000020448.17	ENSMUST00000064364.3	2906	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	67.856390973278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6815	False	NA	-5	True	ATTAAA	-14	NA	3402363	3365981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3388204_3388324_3402208
ENSMUST00000064371.14	chr3	-	6640	22	FSM	ENSMUSG00000052539.16	ENSMUST00000064371.14	6640	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11.0079336469023	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCGTGCTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-13	NA	104127690	103920574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103923385_103923917_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ENSMUST00000064376.13	chrX	-	3179	22	FSM	ENSMUSG00000031389.18	ENSMUST00000064376.13	3353	22	-6	180	0	0	multi-exon	FALSE	canonical	3	19	junction_18	9.77989051592099	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954942	72938137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ENSMUST00000064393.6	chr19	+	1803	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_1	16.9958634673264	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	False	NA	27	True	CATAAA	-19	NA	29078774	29121243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUST00000064404.8	chr7	+	1231	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	42	412	0	-412	multi-exon	FALSE	canonical	3	3305	junction_4	243.181434324251	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039384	137069911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ENSMUST00000064407.10	chrX	+	4530	10	FSM	ENSMUSG00000004221.17	ENSMUST00000064407.10	4530	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	31.82591536608	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGCACTCTGTCCTCC	NA	False	NA	1	True	AATAAA	-15	NA	73473309	73495126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUST00000064444.8	chr4	-	2727	4	FSM	ENSMUSG00000042763.10	ENSMUST00000064444.8	2727	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	2.49443825784929	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGAAGCAATATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	124755964	124749031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124751033_124752923_124753001_124754156_124754267_124755425
ENSMUST00000064447.12	chr2	+	5710	44	FSM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	0	0	0	0	multi-exon	TRUE	canonical	3	896	junction_14	107.189702087653	1904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATGTGGCAACTTTC	4848	False	NA	18	True	ATTAAA	-19	NA	30176408	30234278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ENSMUST00000064454.12	chr5	+	8555	58	FSM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	0	0	0	0	multi-exon	TRUE	canonical	2	352	junction_15	70.6565046091486	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGAGTTTGTCATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	115703312	115760713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ENSMUST00000064477.14	chr16	+	4663	26	FSM	ENSMUSG00000022770.18	ENSMUST00000064477.14	4663	26	0	0	0	0	multi-exon	FALSE	canonical	1	100	junction_1	67.3545841053154	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATATGTTAAATGTGTCT	NA	False	NA	16	True	AATAAA	-14	NA	31482856	31692164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUST00000064488.11	chr8	+	2652	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	6.18465843842649	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAACAAAAACTAAA	NA	False	NA	NA	False	NA	NA	NA	117884873	117931925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ENSMUST00000064488.11-0	chr8	+	3452	11	FSM	ENSMUSG00000052557.12	ENSMUST00000064488.11	2652	11	-153	-647	-153	647	multi-exon	TRUE	canonical	3	16	junction_7	6.18465843842649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATCCTATTTTCCTAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	117884720	117932572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_117885041_117910239_117910355_117913885_117914237_117917010_117917229_117917402_117917525_117919978_117920092_117920851_117921002_117922504_117922642_117923190_117923320_117930688_117930799_117930885
ENSMUST00000064493.6	chr11	+	3426	4	FSM	ENSMUSG00000052563.14	ENSMUST00000064493.6	3426	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.64279609239471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCGTTCCTGACTACA	NA	False	NA	11	True	AATAAA	-17	NA	51541782	51548507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51542041_51544560_51544699_51544818_51544941_51545599
ENSMUST00000064495.8	chr8	+	2580	22	FSM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_11	39.7071479254288	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717245	85729978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ENSMUST00000064503.13	chr2	-	3195	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	31.6842056692114	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	-14	True	ATTAAA	-43	NA	74409292	74350677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ENSMUST00000064536.13	chr12	-	4443	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATGATACGAGCCA	NA	False	NA	NA	False	AATAAA	-36	NA	21423633	21373517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUST00000064536.13-0	chr12	-	4056	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	93	294	0	0	multi-exon	FALSE	canonical	3	115	junction_17	16.3499537508313	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATTGTCTTAATTGTAT	NA	False	NA	-7	True	TATAAA	-18	NA	21423540	21373811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUST00000064571.11	chr5	+	6618	17	FSM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3.8155725323993	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGAGTCGTCACTTC	2005	False	NA	15	True	NA	NA	NA	36050662	36161267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_36050885_36092895_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
ENSMUST00000064606.8	chr16	-	5310	2	FSM	ENSMUSG00000052316.10	ENSMUST00000064606.8	5310	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTTCTCTGTGGAC	NA	False	NA	-1	True	AATAAA	-15	NA	30102074	30088119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30093341_30101985
ENSMUST00000064635.12	chr16	-	2170	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGCGCATGTGCACAG	NA	False	NA	-2	True	NA	NA	NA	5073847	5062015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUST00000064635.12-0	chr16	-	1443	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	0	727	0	0	multi-exon	FALSE	canonical	3	270	junction_1	73.3462573645565	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTGTCCTGTCAGAC	NA	False	NA	-5	True	AATAAA	-17	NA	5073847	5062742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUST00000064637.11	chr6	+	3264	4	FSM	ENSMUSG00000052656.13	ENSMUST00000064637.11	3264	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	2.16024689946929	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGTAGGTTTCTGATC	NA	False	NA	5	True	AATAAA	-16	NA	71470877	71487865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71471873_71473814_71473955_71482717_71482834_71485852
ENSMUST00000064639.15	chr3	-	4073	28	FSM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	252.379539778417	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCAGCCTCTGCCCATT	3547	False	NA	NA	False	AAAAAG	-23	NA	89959782	89907594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000064639.15-0	chr3	-	3863	28	FSM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	-40	250	0	-245	multi-exon	FALSE	canonical	3	275	junction_1	252.379539778417	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3507	False	NA	-4	True	AATATA	-14	NA	89959822	89907844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000064656.8	chr10	-	4259	5	FSM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	4.58257569495584	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTTCCTTCTAG	NA	False	NA	1	True	AATAAA	-20	NA	67748492	67721932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030_67745790_67748200
ENSMUST00000064659.6	chrX	-	3501	7	FSM	ENSMUSG00000052676.17	ENSMUST00000064659.6	3501	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.08166599946613	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTTTGTGATCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	133909958	133872123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133874776_133878396_133878497_133891312_133891379_133892883_133893059_133893145_133893248_133894287_133894395_133909659
ENSMUST00000064667.9	chr10	-	2724	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACGGTCGTACTCGTTA	8605	False	NA	-10	True	ATTAAA	-12	NA	117681940	117649775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ENSMUST00000064667.9-1	chr10	-	2074	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	53	597	53	-597	multi-exon	FALSE	canonical	3	789	junction_2	110.417205107146	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATAGGTGTTATTTTAC	8658	False	NA	-18	True	AATAAA	-21	NA	117681887	117650372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ENSMUST00000064701.8	chr13	+	2130	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	8.85437744847146	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTGGCAAGGAACTGG	NA	False	NA	5	True	AATAAA	-18	NA	55747877	55758255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ENSMUST00000064703.13	chr2	+	1036	4	FSM	ENSMUSG00000035268.15	ENSMUST00000064703.13	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	29.6348143611905	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTATGATCTTTTCTTT	8603	False	NA	10	True	AATAAA	-20	NA	163500318	163568074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_163500413_163545405_163545476_163563047_163563222_163567376
ENSMUST00000064709.13	chr17	+	2812	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTACCTTCTTACTGG	311	False	NA	18	True	NA	NA	NA	29487761	29521864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000064709.13-0	chr17	+	1287	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	160	1365	0	0	multi-exon	FALSE	canonical	3	208	junction_1	54.6168472176855	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	471	False	NA	15	True	AATAAA	-16	NA	29487921	29520499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000064740.9	chr6	+	1519	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGAAGACTTTTTATTG	2315	False	NA	19	True	AATAAA	-23	NA	73225364	73253894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ENSMUST00000064740.9-0	chr6	+	1242	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	270	7	0	0	multi-exon	FALSE	canonical	3	1222	junction_2	134.074081667562	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTGGCTGTGAAGACTT	2585	False	NA	12	True	AATAAA	-16	NA	73225634	73253887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ENSMUST00000064759.7	chr3	-	3215	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	23.6893963620857	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539010	107519847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUST00000064762.6	chr13	-	11808	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTCCTTGTCATTTG	NA	False	NA	0	True	AATAAA	-40	NA	99653048	99557953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
ENSMUST00000064762.6-0	chr13	-	7677	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	0	4131	0	-4131	multi-exon	FALSE	canonical	3	33	junction_5	21.4741446602394	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTACCCCCGTTCATCT	NA	False	NA	-2	True	AATAGA	-19	NA	99653048	99562084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
ENSMUST00000064770.9	chr4	-	2594	9	FSM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	-70	5905	-68	0	multi-exon	FALSE	canonical	3	11	junction_1	6.11861912526021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	82423615	82214317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ENSMUST00000064771.12	chr1	-	3688	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151304206	151243449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ENSMUST00000064771.12-0	chr1	-	2946	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	77	665	58	0	multi-exon	FALSE	canonical	3	144	junction_7	20.5845328266092	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTCATAGATACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	151304129	151244114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ENSMUST00000064798.16	chr17	+	493	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	3604	junction_2	48.5	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTGGTTATTTCCCCTC	NA	False	NA	31	True	AATAAA	-21	NA	31739088	31750305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31739236_31740542_31740667_31750083
ENSMUST00000064807.9	chr4	+	1378	3	FSM	ENSMUSG00000039693.12	ENSMUST00000064807.9	1378	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	89	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGACTTTATCTTTT	2	True	NA	65	True	GATAAA	-14	NA	48540078	48561577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_48540272_48552379_48552831_48560843
ENSMUST00000064848.7	chr10	-	3114	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	-4	True	AATAAA	-29	NA	117628610	117586525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUST00000064848.7-0	chr10	-	2975	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	0	139	0	-136	multi-exon	FALSE	canonical	3	716	junction_19	68.4831139760951	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTGTTTGTTTGTTTG	NA	False	NA	-20	True	AATATA	-15	NA	117628610	117586664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUST00000064853.13	chr8	+	2887	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	11.7334338276463	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCAGGAGTCAGAAAATC	NA	False	NA	NA	False	ATTAAA	-15	NA	73197723	73214845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ENSMUST00000064862.13	chr7	-	3087	6	FSM	ENSMUSG00000054385.15	ENSMUST00000064862.13	3087	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.74355957741627	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	9162	False	NA	NA	False	CATAAA	-24	NA	25239282	25215466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25217611_25218583_25218616_25220238_25220357_25227165_25227442_25237998_25238359_25239125
ENSMUST00000064889.13	chr17	-	1988	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_12	659.372555287727	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906496	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ENSMUST00000064900.16	chr3	+	2931	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	24.6852374253431	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGTGTTTATTACTG	3287	False	NA	113	True	AAAAAG	-4	NA	96604398	96613386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUST00000064910.7	chr6	+	2650	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCTTGGATTCCTGAAGT	NA	False	NA	23	True	AATAAA	-26	NA	137712075	137728930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUST00000064910.7-0	chr6	+	1764	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	53	833	53	423	multi-exon	FALSE	canonical	3	757	junction_9	58.2073772423402	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTCTTTTTTTGGAAA	NA	False	NA	92	True	AATAAA	-19	NA	137712128	137728097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUST00000064911.7	chrX	+	2793	23	FSM	ENSMUSG00000031060.17	ENSMUST00000064911.7	2793	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	95.2811845656392	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTTGAAAGCAGTTTC	2870	False	NA	NA	False	NA	NA	NA	20486336	20516923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUST00000064922.7	chr8	-	1809	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGGTCTCTTTTTTC	NA	False	NA	-1	True	AGTAAA	-21	NA	85705347	85703538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85703500_85705300
ENSMUST00000064924.6	chr15	+	6658	31	FSM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_1	58.1614706370692	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	359	False	NA	17	True	AATAAA	-17	NA	102204700	102232792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ENSMUST00000064941.7	chr11	-	2721	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	7.40104791256493	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTTCTGTGATGTGTG	NA	False	NA	0	True	NA	NA	NA	98666159	98658757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
ENSMUST00000064950.11	chr1	+	1618	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	61.0184398358398	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1455	False	NA	18	True	NA	NA	NA	171156975	171169250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUST00000064953.15	chr17	-	1729	9	FSM	ENSMUSG00000015474.17	ENSMUST00000064953.15	1729	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	20.0249843945008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTTGGCTTATTCCC	3988	False	NA	-1	True	AATAAA	-16	NA	34846351	34835636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846220
ENSMUST00000064989.12	chr7	+	2911	17	FSM	ENSMUSG00000052889.12	ENSMUST00000064989.12	2911	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	2.23257138743647	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAGAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	121888519	122227878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_121888741_121889735_121889768_122024181_122024265_122056437_122056550_122057266_122057396_122116051_122116209_122117267_122117403_122127698_122127796_122143855_122144003_122167356_122167531_122181652_122181745_122183620_122183684_122189267_122189407_122193825_122193907_122194188_122194297_122199912_122200054_122226878
ENSMUST00000065001.12	chr2	+	6392	14	FSM	ENSMUSG00000026883.18	ENSMUST00000065001.12	6392	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	58.8774677870724	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	379	False	NA	9	True	ATTAAA	-19	NA	35582005	35621004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_35582423_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ENSMUST00000065005.5	chr9	+	1911	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	13	4027	0	0	multi-exon	FALSE	canonical	3	441	junction_8	36.048663953599	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8647	False	NA	21	True	GATAAA	-13	NA	21176601	21185041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ENSMUST00000065014.10	chr9	+	5629	33	FSM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_6	29.6719037980376	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9092	False	NA	19	True	AATAAA	-16	NA	108357055	108367729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ENSMUST00000065028.14	chr11	-	4444	18	FSM	ENSMUSG00000017631.20	ENSMUST00000065028.14	4444	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	62.4687049677358	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGCACAAAACTCAGCC	NA	False	NA	-18	True	AATAAA	-19	NA	76359291	76307576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359080
ENSMUST00000065049.15	chr8	-	1006	8	FSM	ENSMUSG00000052926.17	ENSMUST00000065049.15	1006	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	398.770508397182	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8253	False	NA	-8	True	AATAAA	-14	NA	85692670	85684295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85684483_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUST00000065060.12	chr10	+	5530	4	FSM	ENSMUSG00000020023.19	ENSMUST00000065060.12	5530	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTCAGAGCCCATCTC	NA	False	NA	10	True	AATAAA	-25	NA	94350718	94426818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_94350967_94414284_94415202_94418135_94418272_94422589
ENSMUST00000065074.14	chr3	+	3224	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_4	31.3821526695165	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGACTGCTTCCTCC	NA	False	NA	15	True	AATAAA	-15	NA	66893004	67265728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUST00000065080.10	chr9	-	3363	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	0	974	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.29548537403388	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGGCTGGTTATCCT	5315	False	NA	NA	False	TATAAA	-1	NA	44231582	44221507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ENSMUST00000065086.6	chr13	-	2961	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGGTGCAGTTGCTTTC	NA	False	NA	NA	False	ATTAAA	-33	NA	60325179	60322218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_60322200_60325200
ENSMUST00000065103.4	chr6	-	732	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	47	2942	0	224	multi-exon	FALSE	canonical	3	1437	junction_1	9.53356643071673	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTAAATTTATTGTGC	NA	False	NA	-29	True	ATTAAA	-26	NA	71800747	71792922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ENSMUST00000065111.15	chr4	+	6003	18	FSM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	7.72986837222362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTAGTTCCCTGGCTTG	-8	True	NA	3	True	AATAAA	-16	NA	21776271	21837870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ENSMUST00000065111.15-0	chr4	+	2765	18	FSM	ENSMUSG00000040455.18	ENSMUST00000065111.15	6003	18	0	3238	0	-3238	multi-exon	FALSE	canonical	0	0	junction_13	7.72986837222362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAACAAAAAGTTAATTAAT	-8	True	NA	NA	False	NA	NA	NA	21776271	21834632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21817500_21817645_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ENSMUST00000065112.7	chr9	-	5928	8	FSM	ENSMUSG00000033453.9	ENSMUST00000065112.7	5928	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.989743318610787	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGTCTGTCTCTGT	NA	False	NA	NA	False	AATAAA	-22	NA	30833748	30810450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_30814086_30815776_30815953_30816055_30816238_30817356_30817535_30821893_30822178_30822405_30822574_30822976_30823110_30832576
ENSMUST00000065119.15	chr5	-	2009	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	26.6187903556867	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGATTCTTTTTGTCAG	NA	False	NA	-3	True	ATTAAA	-23	NA	33786979	33757690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ENSMUST00000065124.2	chr10	-	300	1	FSM	ENSMUSG00000040006.14	ENSMUST00000065124.2	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTGTAAGAAAAGGTGAC	NA	False	NA	NA	False	NA	NA	NA	7668586	7668286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7668300_7668600
ENSMUST00000065134.4	chr2	-	2683	1	FSM	ENSMUSG00000089762.4	ENSMUST00000065134.4	2683	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTATGGTGGTTCCTTT	NA	False	NA	-5	True	AATAAA	-13	NA	30364231	30361548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30361500_30364200
ENSMUST00000065135.12	chr8	+	1497	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	41.4273125150814	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGTCTAATTAGTTTA	NA	False	NA	NA	False	ACTAAA	-15	NA	126460976	126465918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
ENSMUST00000065143.14	chrX	-	6839	15	FSM	ENSMUSG00000040363.16	ENSMUST00000065143.14	6839	15	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	40.8733733995767	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAGTACTTTGCATC	NA	False	NA	-6	True	AATAAA	-19	NA	11946792	11902978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ENSMUST00000065163.15	chr7	-	1047	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_2	48.5546656414763	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGTAGCAGCAGGACT	2051	False	NA	0	True	AATAAA	-27	NA	79882561	79876894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
ENSMUST00000065167.9	chr5	-	6533	21	FSM	ENSMUSG00000042249.12	ENSMUST00000065167.9	6533	21	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	10.5322124931089	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTTGAGGCTGACATC	539	False	NA	-4	True	AATAAA	-18	NA	113163380	113058347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117136_113121372_113121447_113133630_113133708_113163232
ENSMUST00000065169.12	chr8	-	3812	13	FSM	ENSMUSG00000036180.16	ENSMUST00000065169.12	3812	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_6	322.35922853584	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAG	NA	False	NA	NA	False	TTTAAA	-18	NA	70449034	70361119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ENSMUST00000065181.12	chr7	+	2253	12	FSM	ENSMUSG00000030584.15	ENSMUST00000065181.12	1574	12	6	-685	0	0	multi-exon	FALSE	canonical	3	23	junction_1	16.304438375602	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCATCTCTAACCTC	5831	False	NA	10	True	ATTAAA	-26	NA	29007442	29017013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ENSMUST00000065210.10	chr10	+	1156	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	117	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGTGGTCAGGCTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	128584323	128602428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128584436_128601015_128601110_128601478
ENSMUST00000065253.13	chr4	-	2939	16	FSM	ENSMUSG00000034853.17	ENSMUST00000065253.13	2939	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	6.50606554600312	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTGTGGCTTATTG	NA	False	NA	NA	False	NA	NA	NA	106662195	106604431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106662102
ENSMUST00000065263.12	chr5	-	10071	32	FSM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_31	128.473127279141	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGTGTTGTGGTTTGG	NA	False	NA	49	True	AATAAA	-21	NA	124563977	124506764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563909
ENSMUST00000065263.12-0	chr5	-	5611	32	FSM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	0	4460	0	1370	multi-exon	FALSE	canonical	3	24	junction_31	128.473127279141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563977	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563909
ENSMUST00000065286.2	chr19	-	2035	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	81.0915330641484	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGGGAAGTCATTGTC	9773	False	NA	NA	False	AATGAA	-25	NA	60215129	60187017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ENSMUST00000065291.2	chr9	-	1592	7	FSM	ENSMUSG00000053070.6	ENSMUST00000065291.2	1592	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.38047614284762	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATCGTCAGTTAAAAA	9	True	NA	NA	False	GATAAA	-30	NA	8042824	8021672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_8022546_8023900_8023968_8025962_8026136_8027101_8027269_8037460_8037537_8042409_8042492_8042670
ENSMUST00000065297.6	chr8	-	3930	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCCCCCCCCTTTAAAT	NA	False	NA	-2	True	AATAAA	-15	NA	36716670	36683217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ENSMUST00000065302.8	chr14	-	4363	17	FSM	ENSMUSG00000064128.9	ENSMUST00000065302.8	4363	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.4081333926067	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTTACATTCTTTGAA	2392	False	NA	NA	False	AATAAA	-45	NA	56809303	56764217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787035_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
ENSMUST00000065308.13	chr15	-	4871	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	0	0	0	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGGTGGTTGGTGTTTG	NA	False	NA	-1	True	ATTAAA	-15	NA	38519510	38487670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUST00000065308.13-0	chr15	-	4115	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	0	756	0	55	multi-exon	FALSE	canonical	2	359	junction_2	59.7608180323933	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUST00000065323.14	chr7	+	2332	6	FSM	ENSMUSG00000053091.17	ENSMUST00000065323.14	2332	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	11.6721891691319	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCTCCTTGATAGAAAG	NA	False	NA	-46	True	NA	NA	NA	66357777	66364435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ENSMUST00000065329.13	chr5	+	3607	7	FSM	ENSMUSG00000053094.16	ENSMUST00000065329.13	3607	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	200.953283681114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTATCCCCGGCCATG	6426	False	NA	113	True	NA	NA	NA	130248584	130272606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130248761_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ENSMUST00000065330.8	chr9	-	2496	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGTACCAGTGTGTC	9068	False	NA	-9	True	AATAAA	-21	NA	57673143	57657991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUST00000065330.8-0	chr9	-	1757	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	739	0	0	0	multi-exon	FALSE	canonical	3	232	junction_10	47.1024297556813	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGTACCAGTGTGTC	9807	False	NA	-9	True	AATAAA	-21	NA	57672404	57657991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUST00000065353.13	chr9	-	4171	9	FSM	ENSMUSG00000053110.14	ENSMUST00000065353.13	4171	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	65.3241915372858	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	7	True	NA	-6	True	AATAAA	-22	NA	8004597	7931999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ENSMUST00000065358.9	chr9	-	858	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_7	157.218553197095	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6277	False	NA	-4	True	AATAAA	-15	NA	57065615	57062322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ENSMUST00000065371.14	chr7	-	5052	5	FSM	ENSMUSG00000030956.16	ENSMUST00000065371.14	5052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.6373204105224	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCCTGCGCATGGC	NA	False	NA	-14	True	AATAAA	-17	NA	132388648	132313812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132388596
ENSMUST00000065373.6	chr1	+	1710	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	10.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGTTTTGTTTGCCTC	NA	False	NA	22	True	ATTAAA	-12	NA	16735433	16748499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_16735730_16737891_16737998_16747191
ENSMUST00000065388.11	chr5	-	2693	5	FSM	ENSMUSG00000053134.14	ENSMUST00000065388.11	2693	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	3.34477204006491	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCCAATTCTTTTTTA	NA	False	NA	5	True	AATAAA	-25	NA	31684117	31671907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680606_31683958
ENSMUST00000065398.13	chr2	+	6605	36	FSM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_30	27.3468425219141	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGGTATTTATTTGGG	NA	False	NA	32	True	ATTAAA	-26	NA	31864447	31942383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929334_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ENSMUST00000065418.7	chr3	+	1107	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.88613443106727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCCATTTGCATTACT	NA	False	NA	6	True	ATTAAA	-18	NA	90128093	90133276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUST00000065422.12	chr5	+	2268	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_1	12.1951720866178	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTTTCAGAAGCTGACA	NA	False	NA	26	True	AATAAA	-19	NA	107745600	107809704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ENSMUST00000065461.9	chr9	+	3196	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	11	-1150	0	0	multi-exon	FALSE	canonical	3	22	junction_1	11.7473401244707	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGACGGTCTTGAT	2259	False	NA	NA	False	AATAAA	-20	NA	43996246	44006924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ENSMUST00000065482.6	chr3	-	1923	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCTTAGTTTTTTC	6380	False	NA	0	True	AATAAA	-16	NA	95135988	95126445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95127775_95135394
ENSMUST00000065487.7	chr7	+	4497	3	FSM	ENSMUSG00000053198.15	ENSMUST00000065487.7	4497	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	5	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTCTTGGTTCTCG	NA	False	NA	NA	False	AATAAA	-15	NA	27207230	27219466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27207529_27214675_27214873_27215464
ENSMUST00000065499.5	chr15	+	1830	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	10.3844467687921	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGTCTGCCCCCTGGT	NA	False	NA	4	True	AATAAA	-14	NA	84565202	84587873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ENSMUST00000065504.17	chr14	-	2851	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTGTATGTTTTTTTT	7978	False	NA	16	True	AATAAA	-41	NA	20530201	20505327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUST00000065504.17-0	chr14	-	1751	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	192	908	0	361	multi-exon	FALSE	canonical	3	603	junction_12	120.241741458151	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8170	False	NA	-18	True	AATAAA	-19	NA	20530009	20506235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUST00000065509.11	chr6	-	4816	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_18	110.285703472991	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATAATCATTTCTTAGT	NA	False	NA	-4	True	AATAAA	-18	NA	71609889	71565955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ENSMUST00000065512.11	chr6	+	2191	12	FSM	ENSMUSG00000034930.17	ENSMUST00000065512.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	17.934223251548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	3529	False	NA	18	True	ATTAAA	-18	NA	83112792	83129560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83113041_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUST00000065515.14	chr16	-	1945	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	54.3950027716757	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537813	56510694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUST00000065527.11	chr10	+	1274	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	14.8286509463568	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTATGTGCTCCAGAAG	NA	False	NA	2	True	AATAAA	-12	NA	22049419	22059813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUST00000065534.10	chr8	+	3127	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	53.2429330273546	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169724	124190009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUST00000065536.9	chr12	-	3000	9	FSM	ENSMUSG00000021234.10	ENSMUST00000065536.9	3000	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	4.82020487116471	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGATATTTTTTTTT	405	False	NA	NA	False	AATAAA	-29	NA	84408607	84392082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84393184_84393560_84393710_84395050_84395151_84395379_84395545_84400573_84400702_84401483_84401822_84402697_84403252_84404301_84404625_84408465
ENSMUST00000065562.6	chr14	+	6877	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTCGTTTTTAAAGAT	NA	False	NA	NA	False	AATAAA	-28	NA	47514387	47533559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47514679_47526973
ENSMUST00000065562.6-0	chr14	+	4493	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	71	2313	71	-2313	multi-exon	FALSE	canonical	3	35	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATAAAGACTTGGGAAG	NA	False	NA	5	True	AATAAA	-21	NA	47514458	47531246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47514679_47526973
ENSMUST00000065573.14	chr1	+	4547	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	10.9341463112378	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	186947707	187083624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ENSMUST00000065587.5	chr1	+	2007	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	26	1032	0	-1032	multi-exon	FALSE	canonical	3	47	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTCATGTGTGCTTT	NA	False	NA	5	True	AATAAA	-13	NA	90131727	90143441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_90131810_90141516
ENSMUST00000065600.8	chr10	+	3123	3	FSM	ENSMUSG00000053684.9	ENSMUST00000065600.8	3123	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	1	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATATATGGTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	121575841	121588770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_121576116_121581235_121581522_121586207
ENSMUST00000065601.13	chr19	+	2978	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGCTCTGTGGCTCGAA	NA	False	NA	NA	False	NA	NA	NA	45352189	45518452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUST00000065601.13-0	chr19	+	2252	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	6	720	0	0	multi-exon	FALSE	canonical	3	261	junction_1	116.411041625118	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUST00000065603.12	chr9	-	3017	17	FSM	ENSMUSG00000047766.16	ENSMUST00000065603.12	3017	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	6.23372881989584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3495	False	NA	NA	False	AATAAA	-21	NA	60595441	60494511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60595094
ENSMUST00000065625.12	chr1	+	2749	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	24.5323609686038	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304292	151333912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUST00000065629.6	chr13	-	2910	31	FSM	ENSMUSG00000021585.11	ENSMUST00000065629.6	2910	31	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_30	32.8517883835873	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCAAGGTAAACCTTGG	NA	False	NA	NA	False	AATAAA	-12	NA	74956058	74842406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74955937
ENSMUST00000065630.8	chr9	-	3128	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_8	33.3641956320396	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	-3	True	AATAAA	-17	NA	53159353	53009934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ENSMUST00000065648.15	chr1	+	2529	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGGCTTTTGTCTCTT	NA	False	NA	10	True	AATAAA	-19	NA	155916662	155929482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_155916749_155927039
ENSMUST00000065664.7	chr3	-	4058	3	FSM	ENSMUSG00000048796.8	ENSMUST00000065664.7	4058	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTATGCTCTGTCCTTTTC	NA	False	NA	0	True	ATTAAA	-16	NA	108108150	108103086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108107032_108107440_108107479_108108075
ENSMUST00000065668.12	chr9	-	811	4	FSM	ENSMUSG00000053310.12	ENSMUST00000065668.12	1453	4	180	462	180	0	multi-exon	FALSE	canonical	3	21	junction_3	6.12825877028341	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAAAAAGA	NA	False	NA	-45	True	NA	NA	NA	37464020	37456249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_37456628_37456995_37457014_37457243_37457471_37463832
ENSMUST00000065678.6	chr4	+	564	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	2329	junction_2	60.4225859169308	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCCTGTGCTTTATT	-22	True	NA	NA	False	AATAAA	-25	NA	47474657	47483242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
ENSMUST00000065692.14	chr11	+	3269	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATAAACTGCACCTTAT	2250	False	NA	NA	False	ATTAAA	-20	NA	83193599	83293838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUST00000065692.14-0	chr11	+	5363	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	-71	-2023	0	0	multi-exon	FALSE	canonical	3	171	junction_14	24.9631728752577	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTGTGGTATGGACT	2179	False	NA	NA	False	AATAAA	-16	NA	83193528	83295861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUST00000065694.8	chr1	+	3085	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	12.4998999996	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTCTGTGTAGATGCC	NA	False	NA	12	True	AATAAA	-13	NA	86631564	86977814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ENSMUST00000065698.7	chr5	+	3133	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	4.5	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACATTGCGTTGTCTCA	715	False	NA	NA	False	AATAAA	-11	NA	113873863	113878661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_113874111_113874881_113875234_113876127
ENSMUST00000065703.9	chr7	-	892	5	FSM	ENSMUSG00000053338.10	ENSMUST00000065703.9	892	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	20.4374044340273	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCCTTTTTACGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	3551034	3537586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3537738_3544441_3544508_3545190_3545488_3545940_3546232_3550947
ENSMUST00000065767.9	chr1	-	2359	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_6	34.7545183135931	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGGCCTCTGCCTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	44157968	44145705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ENSMUST00000065778.13	chr9	+	4711	20	FSM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	21.4158146964708	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATTTTTTTGGAGAA	NA	False	NA	32	True	AGTAAA	-23	NA	105520368	105564856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ENSMUST00000065784.6	chr8	-	3104	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTGTGGATCAAACT	NA	False	NA	NA	False	AATAAA	-12	NA	111758383	111733290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
ENSMUST00000065784.6-0	chr8	-	1747	12	FSM	ENSMUSG00000033658.17	ENSMUST00000065784.6	3104	12	0	1357	0	-1357	multi-exon	FALSE	canonical	3	86	junction_11	90.7354705715175	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTCCCATCTTTTTTTT	NA	False	NA	-2	True	AATACA	-16	NA	111758383	111734647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111758253
ENSMUST00000065793.12	chr3	-	1893	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_1	240.376770374213	935	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTCTGTGTGATCAT	NA	False	NA	-2	True	AGTAAA	-16	NA	98247306	98220485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ENSMUST00000065796.10	chr19	+	5030	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	5.21749194749951	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGTTTAAAAATTCTG	NA	False	NA	NA	False	AATAAA	-45	NA	29229227	29290480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ENSMUST00000065806.5	chrX	-	2867	1	FSM	ENSMUSG00000091736.4	ENSMUST00000065806.5	2867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTTGCTTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	156351981	156349114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_156349100_156352000
ENSMUST00000065856.8	chr16	+	5393	11	FSM	ENSMUSG00000053414.9	ENSMUST00000065856.8	5393	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	15.4272486205415	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTGCTTTGTTTATT	NA	False	NA	9	True	AATATA	-43	NA	90182900	90296441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_90183605_90229401_90229695_90244197_90244254_90250567_90250704_90261028_90261157_90269331_90269468_90272707_90272871_90278137_90278222_90284746_90284795_90290300_90290482_90292977
ENSMUST00000065865.10	chr14	+	937	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_1	118.776758531907	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGCTCATTCAAAAC	NA	False	NA	22	True	AATAAA	-16	NA	8508485	8520751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUST00000065871.14	chr17	+	4525	6	FSM	ENSMUSG00000061544.14	ENSMUST00000065871.14	4525	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	72.3756865252413	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGGACTTGTATCATAG	NA	False	NA	11	True	AATAAA	-25	NA	21952704	21967949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUST00000065887.14	chr10	-	2472	7	FSM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	17.3629554575891	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTTATTACCTCTTTT	8201	False	NA	0	True	AATAAA	-22	NA	62414236	62394248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
ENSMUST00000065896.9	chr4	-	2842	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_14	29.7897526488705	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCAGATTCTGTGTGA	NA	False	NA	88	True	AATAAA	-17	NA	117039836	117016835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ENSMUST00000065906.9	chr6	+	2929	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	7.03816128585544	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCTGGCTTATTAATAG	1281	False	NA	12	True	NA	NA	NA	72391290	72407695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ENSMUST00000065917.16	chr10	+	1486	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	0	0	0	0	multi-exon	TRUE	canonical	3	684	junction_15	463.449884621364	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309083	111332745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ENSMUST00000065917.16-0	chr10	+	1428	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	58	0	0	0	multi-exon	FALSE	canonical	3	684	junction_15	463.449884621364	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309141	111332745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ENSMUST00000065928.11	chr4	+	3484	13	FSM	ENSMUSG00000028252.21	ENSMUST00000065928.11	3484	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	125.983023547707	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	-5	True	NA	NA	False	NA	NA	NA	21727700	21750546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482_21747577_21748136
ENSMUST00000065932.14	chrX	+	3156	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_24	10.7256669049321	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3030	False	NA	11	True	NA	NA	NA	7656003	7686806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUST00000065938.15-1	chr3	-	2120	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	67	1998	0	0	multi-exon	FALSE	canonical	3	306	junction_8	38.1901083397259	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGAATACCATTTTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	10396432	10379013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ENSMUST00000065941.12	chr1	-	2219	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	116.920794652714	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATGTTTGTATTTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	171115564	171109518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ENSMUST00000065977.11	chr4	+	4311	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	0	0	0	0	multi-exon	FALSE	canonical	1	202	junction_11	90.2713440442511	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAACACTTGATTTTC	9940	False	NA	NA	False	AATAAA	-23	NA	108857851	108918974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUST00000065987.14	chr16	+	4636	16	FSM	ENSMUSG00000057880.13	ENSMUST00000065987.14	4636	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	3.20138858761146	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGAATGTGGGCT	NA	False	NA	4	True	ATTAAA	-22	NA	8331292	8439432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_8331439_8390699_8390815_8396094_8396193_8399762_8399793_8400600_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ENSMUST00000066003.7	chr2	-	3808	6	FSM	ENSMUSG00000027109.17	ENSMUST00000066003.7	3808	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	184.227685215876	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTTGTAGTCCGATG	2905	False	NA	-2	True	AATAAA	-22	NA	72810770	72766991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809830_72809977_72810593
ENSMUST00000066027.14	chr16	+	1050	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	141.891463802443	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGATCCTTTCCTAGTG	NA	False	NA	25	True	AATAAA	-31	NA	17884306	17889222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
ENSMUST00000066039.8	chr19	+	4233	1	FSM	ENSMUSG00000053536.8	ENSMUST00000066039.8	4233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAATTAGAAAAGAGCACC	NA	False	NA	NA	False	AATATA	-21	NA	31060236	31064469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_31060200_31064500
ENSMUST00000066052.12	chr5	-	1429	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_4	25.951878544722	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGACTTTTTGCCTGTC	NA	False	NA	-6	True	NA	NA	NA	139446257	139345493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
ENSMUST00000066068.7	chr15	-	1135	4	FSM	ENSMUSG00000053559.14	ENSMUST00000066068.7	1135	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_3	209.183067086119	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTTGTTCTGCTTAA	NA	False	NA	16	True	ATTAAA	-37	NA	100534736	100519219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534439
ENSMUST00000066070.7	chr7	-	774	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	370.651715060852	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	False	NA	-4	True	AATAAA	-17	NA	28681239	28670796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ENSMUST00000066087.5	chr11	+	2606	1	FSM	ENSMUSG00000053574.6	ENSMUST00000066087.5	2606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTATATTTCCTGTCCA	NA	False	NA	NA	False	AATAAA	-20	NA	72105963	72108569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72106000_72108600
ENSMUST00000066091.14	chr8	-	3099	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	13.1835335003767	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTTTTTCTTTG	NA	False	NA	15	True	AATAAA	-33	NA	80126147	80065023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
ENSMUST00000066107.10	chr6	-	1647	3	FSM	ENSMUSG00000032641.19	ENSMUST00000066107.10	1647	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	-18	True	ATTAAA	-17	NA	134864795	134846119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134847446_134854179_134854298_134864592
ENSMUST00000066148.12	chr9	-	5000	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066148.12	5000	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	5.55124549363584	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	NA	False	NA	-1	True	ATTAAA	-17	NA	42383554	42323611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
ENSMUST00000066155.6	chr2	+	2298	10	FSM	ENSMUSG00000027259.16	ENSMUST00000066155.6	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	12.1563883525403	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACTAAAACAATAAT	971	False	NA	NA	False	NA	NA	NA	120972621	120987140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ENSMUST00000066160.3	chr5	+	2276	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_1	48.9833895211386	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ENSMUST00000066163.3	chr2	-	3217	2	FSM	ENSMUSG00000054057.3	ENSMUST00000066163.3	3217	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATAGCCTACTTTGCT	8436	False	NA	-23	True	ATTAAA	-17	NA	18042548	18030003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_18033050_18042377
ENSMUST00000066166.6	chr8	-	4767	21	FSM	ENSMUSG00000053626.6	ENSMUST00000066166.6	4767	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	1.14017542509914	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTTGTTTCTGACATA	NA	False	NA	NA	False	AATACA	-14	NA	64659027	64467964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_64469215_64470514_64470766_64478095_64478310_64491489_64491618_64494439_64494566_64500037_64500219_64504387_64504549_64506893_64507020_64509288_64509485_64523186_64523333_64524306_64524424_64527258_64527362_64538484_64538601_64546902_64547028_64551462_64551569_64554870_64555050_64570938_64571057_64571565_64571719_64574491_64574573_64577925_64578037_64658248
ENSMUST00000066173.12	chr8	+	3183	5	FSM	ENSMUSG00000046152.17	ENSMUST00000066173.12	3183	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	11.5758369027902	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTATTCTTTGGAG	NA	False	NA	10	True	AATAAA	-23	NA	31677358	31751511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622_31726459_31749927
ENSMUST00000066177.10	chr2	-	5044	17	FSM	ENSMUSG00000034101.15	ENSMUST00000066177.10	5044	17	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	59.0602182098915	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84480854	84431126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ENSMUST00000066177.10-0	chr2	-	5299	17	FSM	ENSMUSG00000034101.15	ENSMUST00000066177.10	5044	17	-255	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	59.0602182098915	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481109	84431126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ENSMUST00000066208.13	chr18	-	1914	18	FSM	ENSMUSG00000053644.14	ENSMUST00000066208.13	1914	18	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_7	37.2351547251364	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	NA	False	NA	-5	True	ATTAAA	-30	NA	56695381	56659815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ENSMUST00000066237.10	chr11	-	1922	15	FSM	ENSMUSG00000020182.17	ENSMUST00000066237.10	1922	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	28.9743905220187	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTGAGTAAGCGTCTT	5550	False	NA	-1	True	AATAAA	-21	NA	11848044	11764100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11774848_11774869_11779101_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133_11823254_11826244_11826359_11830441_11830651_11848007
ENSMUST00000066257.6	chr4	-	2701	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	0	1037	0	-1037	multi-exon	FALSE	canonical	3	582	junction_8	66.0235516690825	1128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	4981	False	NA	NA	False	AATAAA	-23	NA	129636089	129608648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ENSMUST00000066264.13	chr7	+	1267	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	0	0	0	0	multi-exon	TRUE	canonical	3	645	junction_5	36.3137901908447	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGTGTCTTTACTGCAG	NA	False	NA	14	True	AATAAA	-12	NA	28524641	28531672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ENSMUST00000066264.13-0	chr7	+	1135	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	132	0	0	0	multi-exon	FALSE	canonical	3	645	junction_5	36.3137901908447	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGTGTCTTTACTGCAG	NA	False	NA	14	True	AATAAA	-12	NA	28524773	28531672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ENSMUST00000066272.6	chr18	-	3302	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	0	0	0	0	multi-exon	FALSE	canonical	3	1260	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGAATCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	37777257	37773543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_37776586_37776997
ENSMUST00000066272.6-0	chr18	-	1771	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	0	1531	0	-1531	multi-exon	FALSE	canonical	3	1260	junction_1	0	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGTTGTTCTATGAAT	NA	False	NA	-2	True	AATAAA	-21	NA	37777257	37775074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_37776586_37776997
ENSMUST00000066279.11	chr1	+	4995	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGGACATTTCAAC	NA	False	NA	12	True	ATTAAA	-22	NA	88998136	89082790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ENSMUST00000066279.11-0	chr1	+	3682	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	38	1275	0	-1275	multi-exon	FALSE	canonical	3	96	junction_1	14.3164241345386	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATGTTCTTTAAAG	NA	False	NA	22	True	AGTAAA	-16	NA	88998174	89081515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ENSMUST00000066285.6	chr19	-	5734	12	FSM	ENSMUSG00000025092.8	ENSMUST00000066285.6	5734	12	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	4.33704016068239	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCCTAGAATCGTTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	58849416	58784181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_58788431_58789244_58789349_58792897_58793157_58793832_58793938_58794457_58794545_58797881_58798054_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
ENSMUST00000066296.9	chr12	+	6372	20	FSM	ENSMUSG00000035614.12	ENSMUST00000066296.9	6372	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	35.155846142648	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	9	True	AATAAA	-17	NA	65012577	65069347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUST00000066352.6	chr2	+	952	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	3.34477204006491	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAAGCTTCCTGTGGGGT	8191	False	NA	6	True	ATTAAA	-16	NA	32665797	32667609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
ENSMUST00000066379.11	chr6	-	1550	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_3	29.0320020470023	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGACTAAGACTGGCC	NA	False	NA	-10	True	AATAAA	-25	NA	33037195	32769151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUST00000066386.6	chr3	+	2394	3	FSM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	5.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCTTTAGTGGTTTTA	8611	False	NA	17	True	ATTAAA	-13	NA	95041398	95046829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95042308_95044935_95045298_95045706
ENSMUST00000066391.14	chr11	-	3898	32	FSM	ENSMUSG00000023764.19	ENSMUST00000066391.14	3898	32	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_15	27.928964448237	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTACTTTTCATACAAAAT	7979	False	NA	5	True	AATGAA	-22	NA	3143463	3081880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ENSMUST00000066401.7	chr7	-	1922	9	FSM	ENSMUSG00000007891.17	ENSMUST00000066401.7	1922	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	696.59088378689	2926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8865	False	NA	-8	True	AATAAA	-17	NA	141941594	141929653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931087_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUST00000066439.8	chr19	+	3543	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_16	11.2298193902402	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCGGAGATTCTCATTTC	1869	False	NA	29	True	ATTAAA	-34	NA	37538865	37672507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ENSMUST00000066469.14	chr8	+	1300	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	452	False	NA	26	True	AATAAA	-15	NA	70755167	70765640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUST00000066469.14-0	chr8	+	1048	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	255	-3	0	0	multi-exon	FALSE	canonical	3	1246	junction_3	49.1055803823899	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATACCCACCAGGC	707	False	NA	29	True	AATAAA	-18	NA	70755422	70765643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUST00000066489.13	chr11	-	2178	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAGTCTGCAAGGTGG	NA	False	NA	NA	False	AATAAA	-31	NA	100305662	100299281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ENSMUST00000066489.13-0	chr11	-	1717	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	140	321	140	-321	multi-exon	FALSE	canonical	3	85	junction_5	9.9979589753844	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACAAAAGGAAAA	NA	False	NA	-34	True	NA	NA	NA	100305522	100299602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ENSMUST00000066496.10	chr11	-	3927	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_5	15.4090882274066	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGTTTATCTGGCTTA	9458	False	NA	NA	False	NA	NA	NA	6150415	6055690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ENSMUST00000066497.12	chr18	-	5732	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCATGTGTTACCTT	NA	False	NA	NA	False	AATAAA	-36	NA	24153867	24142758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ENSMUST00000066497.12-0	chr18	-	3161	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	0	2571	0	1652	multi-exon	FALSE	canonical	3	144	junction_3	47.8957200593122	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCTTGGAATTGC	NA	False	NA	NA	False	AATAAA	-23	NA	24153867	24145329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ENSMUST00000066503.14	chr7	-	3140	7	FSM	ENSMUSG00000054385.15	ENSMUST00000066503.14	3140	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.60727512683216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	9162	False	NA	NA	False	CATAAA	-24	NA	25239282	25215466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25217611_25218583_25218616_25219387_25219441_25220238_25220357_25227165_25227442_25237998_25238359_25239125
ENSMUST00000066509.10	chr2	+	7197	21	FSM	ENSMUSG00000036617.18	ENSMUST00000066509.10	7197	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	63.9268918374732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCCTGCCTGACTC	4833	False	NA	34	True	AATAAA	-26	NA	20524638	20815347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
ENSMUST00000066510.8	chr13	-	4261	4	FSM	ENSMUSG00000050876.10	ENSMUST00000066510.8	4261	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTGTGAGTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	59853995	59847896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59851837_59851954_59852016_59852859_59852903_59853778
ENSMUST00000066529.5	chr15	-	6892	8	FSM	ENSMUSG00000022206.8	ENSMUST00000066529.5	6892	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	7.24498419034627	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCCTGTCTATAATTC	1480	False	NA	-1	True	ATTAAA	-18	NA	11905725	11839981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_11845375_11846383_11846472_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ENSMUST00000066532.5	chr18	-	3787	10	FSM	ENSMUSG00000053846.6	ENSMUST00000066532.5	3787	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	1.89215404065849	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTGTCCTGTAACTCA	NA	False	NA	NA	False	NA	NA	NA	75094334	75072392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_75074410_75076410_75076516_75078874_75079094_75080076_75080198_75081043_75081287_75082128_75082351_75087248_75087361_75088489_75088670_75090268_75090451_75093948
ENSMUST00000066544.5	chr5	+	1565	6	FSM	ENSMUSG00000053856.8	ENSMUST00000066544.5	1565	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	5.93295878967653	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTGTGTGTGGGACCC	NA	False	NA	5	True	AATAAA	-17	NA	31265662	31269870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31265766_31266230_31266347_31266838_31267053_31267521_31267664_31268456_31268524_31268947
ENSMUST00000066560.13	chr9	-	3688	19	FSM	ENSMUSG00000036395.16	ENSMUST00000066560.13	3688	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.66884489725515	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTTTTGTGTCTGGGG	NA	False	NA	NA	False	AATAAA	-15	NA	26717764	26674340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_26676120_26676397_26676515_26676875_26676988_26677280_26677369_26678372_26678452_26678690_26678763_26679015_26679157_26679714_26679822_26680331_26680413_26681035_26681174_26682323_26682409_26685268_26685340_26689314_26689397_26691969_26692063_26703077_26703187_26705378_26705475_26706081_26706151_26707701_26707900_26717593
ENSMUST00000066568.6	chr3	-	3518	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	2.16024689946929	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAAATTTTTGTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	154799040	154790554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
ENSMUST00000066587.12	chr11	-	3987	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116089871	116062713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ENSMUST00000066587.12-0	chr11	-	2972	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	244	771	0	-771	multi-exon	FALSE	canonical	3	53	junction_12	15.262593015675	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGAAAGATTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	116089627	116063484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ENSMUST00000066594.4	chr8	+	2718	9	FSM	ENSMUSG00000053886.5	ENSMUST00000066594.4	2718	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	6.37867541108654	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGTTGCCTTGGTCA	NA	False	NA	17	True	NA	NA	NA	68729218	68800346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_68729525_68734684_68735064_68746954_68747112_68749305_68749478_68781903_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ENSMUST00000066597.13	chr8	-	2991	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	2	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGAGCAGACCTGTGCT	NA	False	NA	-18	True	AATAAA	-16	NA	70929555	70902917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70905670_70908115_70908299_70929499
ENSMUST00000066601.13	chr9	+	4432	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_1	89.8853847964173	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGCTTCTTCCCTCC	NA	False	NA	7	True	AATAAA	-23	NA	44290786	44303666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUST00000066632.14	chr1	+	3714	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGGACAGAGAAGTT	NA	False	NA	16	True	AATAAA	-18	NA	190660688	190679159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUST00000066632.14-0	chr1	+	2548	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	0	1166	0	-1166	multi-exon	FALSE	canonical	3	110	junction_1	32.0263563334951	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660688	190677993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUST00000066640.5	chr2	-	1394	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTAGAGTGATCTTGT	NA	False	NA	-1	True	ATTAAA	-38	NA	150881318	150871604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150872837_150881156
ENSMUST00000066646.12	chr19	+	2823	12	FSM	ENSMUSG00000024968.15	ENSMUST00000066646.12	2823	12	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_11	65.835633045581	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245643	7252590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ENSMUST00000066650.12	chr9	+	2261	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	17.2933867270063	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCCATCCTGCTGCAT	6406	False	NA	49	True	TATAAA	-1	NA	99457851	99466554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ENSMUST00000066668.14-1	chr1	-	1841	15	FSM	ENSMUSG00000026209.16	ENSMUST00000185797.7	2510	15	0	669	0	0	multi-exon	FALSE	canonical	3	522	junction_14	119.683362013511	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294303	75285208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ENSMUST00000066674.8	chr4	-	1935	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	0	1918	0	-1918	multi-exon	FALSE	canonical	3	29	junction_2	2.31503239718152	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTTGCACTCTCAAT	-1	True	NA	NA	False	AATAAA	-15	NA	8239041	8145279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ENSMUST00000066675.10	chr5	-	1571	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	0	3356	0	-409	multi-exon	FALSE	canonical	3	65	junction_3	27.6445694888204	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900595	146891738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
ENSMUST00000066715.11	chr4	-	2218	11	FSM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	11.2782977438973	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTCTGTTCCTTGG	8679	False	NA	-1	True	AATAAA	-18	NA	152112118	152104230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
ENSMUST00000066743.11	chr18	-	5012	4	FSM	ENSMUSG00000053950.11	ENSMUST00000066743.11	5012	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	18.0800688297608	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTCTTAAGTCAAGCAGG	5936	False	NA	87	True	AATAAA	-29	NA	80194697	80169525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_80174210_80180698_80180789_80185863_80185985_80194580
ENSMUST00000066760.8	chr11	-	2219	11	FSM	ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	281.644616493907	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGCAAGTGGTGGTC	8292	False	NA	-11	True	AATAAA	-11	NA	69572910	69563946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
ENSMUST00000066773.9	chr9	-	4461	13	FSM	ENSMUSG00000043154.16	ENSMUST00000066773.9	4461	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	11.4537111889553	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCATATCTGTTACTGT	NA	False	NA	NA	False	AATAAA	-21	NA	101076272	100982484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101075829
ENSMUST00000066774.6	chr4	-	1374	1	FSM	ENSMUSG00000054000.6	ENSMUST00000066774.6	1374	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCATGACTGTTATTTGA	NA	False	NA	5	True	AATAAA	-22	NA	93223748	93222374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_93222400_93223700
ENSMUST00000066778.6	chr19	+	3604	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_8	28.6135348218286	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGACACATTTCTGTGG	NA	False	NA	75	True	GATAAA	-14	NA	42078909	42110526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ENSMUST00000066791.7	chr12	-	2380	4	FSM	ENSMUSG00000054013.7	ENSMUST00000066791.7	2380	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGTGTGGATGAGGAG	NA	False	NA	-10	True	AATAAA	-20	NA	112477606	112466622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112468357_112469675_112469755_112470967_112471106_112477177
ENSMUST00000066794.9	chr3	+	2798	1	FSM	ENSMUSG00000095661.2	ENSMUST00000066794.9	2798	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAAATAGTAAG	NA	False	NA	NA	False	AATAAA	-32	NA	12920895	12923693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_12920900_12923700
ENSMUST00000066804.5	chr13	+	1367	8	FSM	ENSMUSG00000054021.7	ENSMUST00000066804.5	1367	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_7	21.27372625027	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATTTTTTTGTACTT	NA	False	NA	9	True	ATTAAA	-21	NA	43524185	43548678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
ENSMUST00000066849.13	chr3	+	3398	11	FSM	ENSMUSG00000027985.15	ENSMUST00000066849.13	3398	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	10.581115253129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTGGTGAACTGAACC	NA	False	NA	NA	False	AATAAA	-17	NA	130904119	131018005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ENSMUST00000066854.14	chr5	+	6919	21	FSM	ENSMUSG00000057406.17	ENSMUST00000066854.14	6919	21	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_10	22.6154814231314	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTACACTTATTTAA	3669	False	NA	12	True	ATTAAA	-15	NA	34000455	34055310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ENSMUST00000066873.5	chr7	+	2848	13	FSM	ENSMUSG00000054065.13	ENSMUST00000066873.5	2848	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	30.7431112428279	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCAGCTCCGTGTGTTTC	NA	False	NA	19	True	ATTAAA	-17	NA	140659672	140670423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ENSMUST00000066880.6	chr7	+	3040	21	FSM	ENSMUSG00000054083.9	ENSMUST00000066880.6	3040	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	1.10792599030802	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGTAAATAGTAATTC	NA	False	NA	NA	False	AATAAA	-11	NA	28580846	28592988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28581386_28581975_28582046_28582194_28582314_28582552_28582687_28585152_28585322_28585795_28585871_28585957_28586044_28586122_28586198_28586997_28587162_28587244_28587481_28587843_28587856_28588036_28588246_28588497_28588541_28588621_28588682_28589205_28589264_28589580_28589652_28589748_28589812_28590335_28590415_28592043_28592161_28592247_28592307_28592386
ENSMUST00000066882.10	chr3	-	1802	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	530	10	0	0	multi-exon	FALSE	canonical	3	22	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCCATTGGACTCCT	NA	False	NA	-6	True	AATAAA	-13	NA	57754970	57749325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_57750736_57752594_57752788_57754771
ENSMUST00000066888.10	chr11	-	2613	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	0	0	0	0	multi-exon	TRUE	canonical	3	770	junction_1	49.2161035848126	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGCTTTGATCAAACT	NA	False	NA	NA	False	AAGAAA	-4	NA	93776592	93750068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUST00000066888.10-0	chr11	-	1845	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	57	711	57	-711	multi-exon	FALSE	canonical	3	770	junction_1	49.2161035848126	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAGTGTACATGATTT	NA	False	NA	-14	True	AATAAA	-13	NA	93776535	93750779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUST00000066936.9	chr2	+	3384	14	FSM	ENSMUSG00000026930.16	ENSMUST00000066936.9	3384	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	5.66521619677599	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	26205526	26238249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
ENSMUST00000066983.13	chr16	-	2848	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGGTGAGTCCTGTGC	NA	False	NA	-5	True	NA	NA	NA	45563318	45550087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ENSMUST00000066983.13-0	chr16	-	1148	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	48	1652	0	174	multi-exon	FALSE	canonical	3	291	junction_3	18.7932833746528	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGATGTTTGCCTTTCT	NA	False	NA	-32	True	ATTAAA	-20	NA	45563270	45551739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ENSMUST00000066984.14	chr13	-	1560	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	-18	114	0	114	multi-exon	FALSE	canonical	3	225	junction_10	29.724213848122	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTATTTTGAGCCA	NA	False	NA	-10	True	ATTAAA	-16	NA	100629087	100605201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ENSMUST00000066986.13	chr1	-	5756	9	FSM	ENSMUSG00000026135.18	ENSMUST00000066986.13	5756	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.8507730482683	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCCTTGTGTCTAGTG	NA	False	NA	-62	True	NA	NA	NA	74627304	74605660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74624542_74624857_74626526_74626779_74627139
ENSMUST00000066987.14	chr11	+	4715	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	7.98034776267445	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTGTCACCTGCCTT	NA	False	NA	NA	False	AATAAA	-33	NA	57536267	57678340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ENSMUST00000066987.14-0	chr11	+	3260	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	0	1455	0	-1455	multi-exon	TRUE	canonical	3	24	junction_9	7.98034776267445	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGCAGCCGAGCAGCT	NA	False	NA	30	True	AATAAA	-21	NA	57536267	57676885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ENSMUST00000066991.7	chr15	+	1298	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	15	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCCACTCTCTTGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	89206922	89208934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89207337_89207479_89207604_89208174
ENSMUST00000066991.7-0	chr15	+	1037	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	261	0	261	0	multi-exon	FALSE	canonical	3	63	junction_1	15	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCCACTCTCTTGTG	NA	False	NA	NA	False	ATTAAA	-19	NA	89207183	89208934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89207337_89207479_89207604_89208174
ENSMUST00000066994.7	chr14	+	4229	10	FSM	ENSMUSG00000034522.11	ENSMUST00000066994.7	4229	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	17.4171761399877	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	65596124	65636379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_65596205_65622844_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
ENSMUST00000067020.3	chr2	-	1725	2	FSM	ENSMUSG00000054160.3	ENSMUST00000067020.3	1725	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACGGATTGTTACCGTT	NA	False	NA	NA	False	AATAAA	-18	NA	146927365	146925235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_146926410_146926814
ENSMUST00000067033.8	chr15	-	2471	9	FSM	ENSMUSG00000022329.16	ENSMUST00000067033.8	2471	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.4851500278157	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGTATTAGAAAAAGAC	NA	False	NA	NA	False	ACTAAA	-33	NA	35155896	34875818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35155672
ENSMUST00000067043.5	chr2	-	5267	2	FSM	ENSMUSG00000050714.10	ENSMUST00000067043.5	5267	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTGTCATTGACTTC	NA	False	NA	2	True	AATAAA	-14	NA	37333133	37322179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37327012_37332698
ENSMUST00000067081.10	chr4	+	2595	20	FSM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_2	74.7943440763884	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3962	False	NA	23	True	ATTAAA	-28	NA	155709325	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUST00000067098.8	chr19	+	1401	3	FSM	ENSMUSG00000054200.8	ENSMUST00000067098.8	1401	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATCTCTATCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	38085518	38102711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38086142_38095829_38095959_38102062
ENSMUST00000067103.4	chr17	-	2547	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	5	232	0	0	multi-exon	FALSE	canonical	3	80	junction_1	52.1152568831815	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAGGGCCTCTCAAAT	NA	False	NA	-4	True	AATAAA	-31	NA	47813212	47799206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUST00000067120.14	chr2	-	4565	6	FSM	ENSMUSG00000027577.15	ENSMUST00000067120.14	4565	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.1540659228538	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTGTGGCCCTGTCTT	1536	False	NA	1	True	AATAAA	-24	NA	180681098	180664103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180666673_180669990_180671366_180675712_180675823_180675901_180675947_180679211_180679364_180680784
ENSMUST00000067124.6-1	chr12	-	4058	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	4	1519	0	0	multi-exon	FALSE	canonical	3	67	junction_16	22.2780160696593	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTGCTTTACTTTG	7246	False	NA	-25	True	AATGAA	-13	NA	16639767	16587188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ENSMUST00000067137.14	chr6	+	2103	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	21.35790251874	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTTATTATG	3418	False	NA	22	True	NA	NA	NA	85892728	85907264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ENSMUST00000067145.12	chr5	+	2198	2	FSM	ENSMUSG00000118332.2	ENSMUST00000067145.12	2198	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGTATGTTCTCCTT	NA	False	NA	26	True	AATAAA	-39	NA	143534460	143550280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143534890_143548511
ENSMUST00000067150.14	chr5	+	4218	18	FSM	ENSMUSG00000054252.19	ENSMUST00000067150.14	4218	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	3.88235294117647	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTCGATTTCTGTTCTG	NA	False	NA	13	True	AATAAA	-20	NA	33879067	33894411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33879273_33879649_33879856_33884990_33885261_33885535_33885590_33887024_33887195_33887279_33887404_33887487_33887679_33889460_33889606_33890065_33890257_33890600_33890747_33891003_33891126_33891199_33891311_33891390_33891582_33891690_33891814_33891896_33891968_33892194_33892333_33892476_33892583_33892757
ENSMUST00000067167.6	chr19	-	1402	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	0	0	0	0	multi-exon	TRUE	canonical	3	295	junction_2	36.3583414649629	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTCAGAGTCTTTCCT	NA	False	NA	-7	True	AATAAA	-20	NA	38212586	38176928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ENSMUST00000067190.12	chr15	+	4143	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	6.67529450936089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATGGTTATCAAACAGT	NA	False	NA	NA	False	GATAAA	-25	NA	7159039	7221224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
ENSMUST00000067230.6	chr13	-	4795	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCATCCTT	NA	False	NA	0	True	AATAAA	-24	NA	29137696	29132901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_29132900_29137700
ENSMUST00000067232.10	chr2	-	5498	20	FSM	ENSMUSG00000034101.15	ENSMUST00000067232.10	6119	20	-89	710	0	0	multi-exon	FALSE	canonical	3	20	junction_18	71.3035336138201	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481109	84431126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ENSMUST00000067240.11	chr4	-	2185	12	FSM	ENSMUSG00000000409.15	ENSMUST00000067240.11	2185	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	59.1335510476424	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACTGCATACTT	NA	False	NA	0	True	NA	NA	NA	129452184	129442141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873
ENSMUST00000067246.6	chr13	-	3179	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_14	28.3666470818577	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	-4	True	AATAAA	-19	NA	100969935	100939155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ENSMUST00000067252.14	chr8	-	8216	51	FSM	ENSMUSG00000014444.18	ENSMUST00000067252.14	8216	51	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_46	26.2908729410037	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTCCTCGCCTTCC	6111	False	NA	2	True	AGTAAA	-38	NA	123278068	123208436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229048_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ENSMUST00000067268.15	chr5	+	3706	11	FSM	ENSMUSG00000029528.20	ENSMUST00000067268.15	3706	11	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	21.5722043379901	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644734	115694046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUST00000067284.10	chr12	+	2499	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_10	70.3324286444819	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTGCCACAGCTTT	NA	False	NA	NA	False	NA	NA	NA	21336358	21365057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ENSMUST00000067384.6	chr12	-	2349	1	FSM	ENSMUSG00000054364.6	ENSMUST00000067384.6	2349	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGGCTTAATAGTG	NA	False	NA	87	True	ATTAAA	-28	NA	8550009	8547660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_8547700_8550000
ENSMUST00000067386.14	chr7	+	2701	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_8	25.2899238218224	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	396	False	NA	NA	False	AATAAA	-20	NA	27252657	27281524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ENSMUST00000067398.13	chr1	-	1914	11	FSM	ENSMUSG00000054387.14	ENSMUST00000067398.13	1914	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	94.8116026654966	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTATTCACTTCCAAA	NA	False	NA	-58	True	AATACA	-15	NA	132953094	132919091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ENSMUST00000067399.14	chr11	-	2864	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	15.1867998238236	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGACTATAACATTCATA	NA	False	NA	2	True	AATAAA	-26	NA	121563979	121507022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ENSMUST00000067404.13	chr6	+	2766	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	164.658434342125	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAGGGTTAATTT	NA	False	NA	29	True	AATAAA	-20	NA	146479356	146500696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
ENSMUST00000067417.10	chr14	-	3400	7	FSM	ENSMUSG00000021944.16	ENSMUST00000067417.10	3400	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	3.90156663690654	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCGAAGTCTTTTCTAA	NA	False	NA	NA	False	AATAAA	-19	NA	63482720	63436370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442208_63477984_63479095_63482599
ENSMUST00000067425.6	chr7	-	2684	3	FSM	ENSMUSG00000054381.6	ENSMUST00000067425.6	2684	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGATTTCTGCTCCTC	915	False	NA	NA	False	NA	NA	NA	126975222	126971708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126973871_126974560_126974675_126974814
ENSMUST00000067426.6	chr14	+	723	8	FSM	ENSMUSG00000037628.11	ENSMUST00000067426.6	917	8	45	149	0	0	multi-exon	FALSE	canonical	3	28	junction_6	72.4563204099335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGTTCTCCAGCATAG	NA	False	NA	2	True	AATAAA	-17	NA	46998042	47008977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007292_47007394_47008857
ENSMUST00000067476.9	chr8	-	3466	5	FSM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	423.496753234308	2058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTTTATGTGTTTTT	NA	False	NA	-4	True	AATAAA	-38	NA	54983033	54973467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_54976431_54977975_54978092_54979485_54979563_54981376_54981451_54982797
ENSMUST00000067481.6	chr4	-	3525	11	FSM	ENSMUSG00000028454.17	ENSMUST00000067481.6	3525	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	53.2560794651653	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	-7	True	NA	-7	True	AATAAA	-21	NA	43025819	43017634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019782_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
ENSMUST00000067485.4	chr3	-	2050	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	0	6970	0	-6970	multi-exon	FALSE	canonical	3	92	junction_7	12.5940462123973	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTGTAGCCTATTTT	108	False	NA	64	True	TATAAA	-21	NA	115801055	115739591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ENSMUST00000067496.7	chr4	-	539	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	7869	junction_2	284	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9241	False	NA	-20	True	AATAAA	-19	NA	132260970	132257865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132258135_132260606_132260699_132260792
ENSMUST00000067496.7-0	chr4	-	481	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	58	0	-6	0	multi-exon	FALSE	canonical	3	7869	junction_2	284	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9299	False	NA	-20	True	AATAAA	-19	NA	132260912	132257865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132258135_132260606_132260699_132260792
ENSMUST00000067505.15	chr5	+	2164	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCCTGCCCAGCCTGC	NA	False	NA	NA	False	NA	NA	NA	123214337	123255812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUST00000067505.15-0	chr5	+	1693	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	50	421	0	319	multi-exon	FALSE	canonical	3	93	junction_3	11.7768508046945	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACCTGTGTTGTCTCTTG	NA	False	NA	25	True	NA	NA	NA	123214387	123255391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUST00000067530.6	chr2	+	1993	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	60	4979	60	1235	multi-exon	FALSE	canonical	3	50	junction_2	5.74804314527997	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCATTTTGTCACAT	NA	False	NA	21	True	AATAAA	-18	NA	173579363	173621153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
ENSMUST00000067538.6	chr17	-	6855	33	FSM	ENSMUSG00000013236.18	ENSMUST00000067538.6	6855	33	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_23	73.3638194207472	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGTGCATGGAGTGCT	NA	False	NA	-7	True	ATTAAA	-14	NA	56783483	56719432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ENSMUST00000067543.8	chr15	+	4330	3	FSM	ENSMUSG00000032501.10	ENSMUST00000067543.8	4330	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	4.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATTTCAGGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	59520198	59528948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_59521372_59523327_59523621_59526084
ENSMUST00000067545.8	chr17	+	4467	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	24.2866218317822	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73414988	73550363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ENSMUST00000067549.15	chr14	-	2933	5	FSM	ENSMUSG00000049295.18	ENSMUST00000067549.15	2933	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	128.195895020082	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	4694	False	NA	-7	True	AATAAA	-20	NA	52258190	52243538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257979
ENSMUST00000067556.4	chr18	-	2291	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGGGGAAGACAC	NA	False	NA	NA	False	NA	NA	NA	70605551	70586210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUST00000067556.4-0	chr18	-	3243	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	-24	-928	0	0	multi-exon	FALSE	canonical	3	72	junction_5	54.5590276672889	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUST00000067563.9	chr15	+	1383	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	11.5516232625549	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2660	False	NA	27	True	AATAAA	-17	NA	58004772	58022050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
ENSMUST00000067567.5	chr4	-	1626	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	24.7476149243608	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCCTTATGTGGTACA	NA	False	NA	-11	True	ATTAAA	-20	NA	135699937	135695534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ENSMUST00000067584.7	chr2	-	4147	7	FSM	ENSMUSG00000039501.15	ENSMUST00000067584.7	4147	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	12.2429117814713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCTGTCATCTCTT	NA	False	NA	NA	False	AATAAA	-12	NA	166885415	166877718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885281
ENSMUST00000067630.13	chr3	+	1774	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	66	1431	0	-386	multi-exon	FALSE	canonical	3	95	junction_2	15.9251177389682	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTGTTCAGTAGTGTA	NA	False	NA	4	True	AATAAA	-13	NA	106455179	106481775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUST00000067631.7	chr2	-	3139	2	FSM	ENSMUSG00000049922.9	ENSMUST00000067631.7	3139	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATACAGCATGTTTTAT	NA	False	NA	NA	False	AATAAA	-24	NA	92290139	92283108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92285120_92289011
ENSMUST00000067646.12	chr9	+	3549	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_18	395.630525194118	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCCTGTCTCAGGCCTG	NA	False	NA	115	True	AATAAA	-13	NA	21279166	21316656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUST00000067663.14	chr2	+	1636	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	1724	junction_1	113.356309451931	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	False	NA	18	True	AATAAA	-19	NA	90884353	90889777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ENSMUST00000067664.10	chr11	+	2100	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	0	0	0	0	multi-exon	FALSE	canonical	3	8977	junction_5	918.346862574267	9269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTAACTATGGATCATTT	2991	False	NA	26	True	ATTAAA	-22	NA	75623694	75656671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUST00000067692.13	chr11	-	1998	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	0	1946	0	0	multi-exon	FALSE	canonical	3	130	junction_1	12.5940213990607	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAGAAATAAAA	NA	False	NA	-38	True	NA	NA	NA	87295349	87269416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ENSMUST00000067700.13	chr14	-	7334	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10.4432623444526	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690644	36596892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ENSMUST00000067744.8	chr16	+	4425	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_2	152	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTTGTTTTGTGAGC	NA	False	NA	21	True	AATAAA	-30	NA	64672358	64679870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_64672600_64673161_64673389_64675913
ENSMUST00000067752.5	chr15	+	1946	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTGCATTTGTGTC	538	False	NA	12	True	AATAAA	-28	NA	100202641	100212236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100203226_100210874
ENSMUST00000067763.10	chrX	-	1032	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	69.0238054173031	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGTGGCAAATAGTCC	NA	False	NA	NA	False	AATAAA	-13	NA	52799663	52785714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
ENSMUST00000067778.8	chr13	+	4038	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	29	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATAGTGGATATTTATTT	NA	False	NA	20	True	AATAAA	-25	NA	41071076	41114368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41072278_41107051_41107148_41111627
ENSMUST00000067780.10	chr2	-	2999	16	FSM	ENSMUSG00000027201.17	ENSMUST00000067780.10	2999	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	210.706705055999	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965580	124929661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124955971_124957357_124957411_124958584_124958794_124965304
ENSMUST00000067786.9	chr8	+	3566	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_6	45.0493063209635	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966803	23059628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUST00000067801.14	chr17	-	2533	17	FSM	ENSMUSG00000024039.16	ENSMUST00000067801.14	2533	17	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_16	84.4695766237762	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTTGGTGTGAGTGTC	1872	False	NA	1	True	NA	NA	NA	31856212	31831596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
ENSMUST00000067826.15	chr17	+	2087	17	FSM	ENSMUSG00000055817.19	ENSMUST00000067826.15	2087	17	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_6	449.066236066574	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTTTATTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	84013619	84122334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070342_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
ENSMUST00000067836.9	chr7	-	3019	24	FSM	ENSMUSG00000054662.9	ENSMUST00000067836.9	3019	24	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	30.0592986723404	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAGATCCAGTTTCTA	NA	False	NA	-8	True	AATAAA	-28	NA	140697719	140681124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
ENSMUST00000067837.10	chr5	-	2388	5	FSM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	36.6401419211225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACCTTTAAAATGTTT	2760	False	NA	NA	False	AGTAAA	-24	NA	146157786	146146766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157749
ENSMUST00000067857.11	chr10	+	1442	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	41.9205597927	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCGATCCTCCTCCTTCG	NA	False	NA	NA	False	AATAAA	-21	NA	61551089	61575039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
ENSMUST00000067880.13	chr9	+	4593	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_13	22.3632635264971	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4950	False	NA	14	True	AATAAA	-19	NA	70586278	70687511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ENSMUST00000067888.14	chr6	-	2671	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3.903123748999	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAATGCTGTGGTATT	NA	False	NA	-6	True	ATTAAA	-19	NA	43643212	43321934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ENSMUST00000067896.4	chr4	+	1137	8	FSM	ENSMUSG00000006390.16	ENSMUST00000067896.4	1137	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	41.2162044614018	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCACTGTTCCCATCCC	NA	False	NA	NA	False	NA	NA	NA	118286897	118289469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118287028_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUST00000067902.13	chr4	-	990	3	FSM	ENSMUSG00000043257.16	ENSMUST00000067902.13	990	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	36	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTGTCTTCTTGTTTT	NA	False	NA	-2	True	NA	NA	NA	133399958	133389564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133390103_133397048_133397172_133399629
ENSMUST00000067908.14	chr10	+	4422	11	FSM	ENSMUSG00000019944.15	ENSMUST00000067908.14	4422	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.33452350598575	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAAATGCCTCGAC	NA	False	NA	NA	False	AATAAA	-12	NA	69049023	69127610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_69049206_69051131_69051183_69084600_69084803_69085454_69085559_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
ENSMUST00000067912.8	chr8	+	1847	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	0	0	0	0	multi-exon	FALSE	canonical	3	2955	junction_2	16	2337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTGGGGTTTAGCCAA	NA	False	NA	21	True	ATTAAA	-16	NA	73072876	73075500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_73072994_73073269_73074087_73074587
ENSMUST00000067924.13	chr5	+	2916	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	0	4060	0	2086	multi-exon	FALSE	canonical	3	25	junction_1	0.471404520791032	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAAGTTTTATTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	105667253	105756824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
ENSMUST00000067925.8	chr8	+	2628	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGTTCTGTTTTGCTT	NA	False	NA	5	True	AAAACA	-17	NA	57964940	57969033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUST00000067925.8-0	chr8	+	1124	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	0	1504	0	1286	multi-exon	FALSE	canonical	3	4513	junction_1	1044.37167114969	2135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57964940	57967529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUST00000067929.15	chr7	+	4935	13	FSM	ENSMUSG00000030759.17	ENSMUST00000067929.15	4935	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	154.7915040376	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTACTCCTTTGCAA	NA	False	NA	14	True	AATAAA	-22	NA	113113067	113170718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113153323_113153496_113160582_113160713_113165591_113165720_113167301
ENSMUST00000067935.11	chr5	-	1544	4	FSM	ENSMUSG00000043614.14	ENSMUST00000067935.11	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	2.86744175568088	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGCCCCGCCTCCTCTCT	NA	False	NA	-2	True	NA	NA	NA	135107120	135101753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135102838_135103247_135103331_135105311_135105484_135106915
ENSMUST00000067936.6	chr11	-	2150	6	FSM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	1338.58961597646	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATTGTGTGGTCTGTGC	NA	False	NA	-15	True	AATAAA	-17	NA	120472206	120468934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120471815
ENSMUST00000067940.3	chrX	-	1224	9	FSM	ENSMUSG00000054727.3	ENSMUST00000067940.3	1224	9	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_5	153.190241203544	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759798	52744867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52753476_52753824_52759728
ENSMUST00000067947.7	chr18	-	6440	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_22	28.5588755906111	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTGGGCTCTAAAAC	-2	True	NA	NA	False	ATTAAA	-21	NA	10182045	10064400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ENSMUST00000067955.12	chr14	-	2953	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	6	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCATGTTTTCTTGAAG	NA	False	NA	-6	True	AATAAA	-13	NA	31807566	31802525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31805204_31806863_31806939_31807366
ENSMUST00000067955.12-0	chr14	-	650	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	0	2303	0	0	multi-exon	FALSE	canonical	3	570	junction_1	6	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTGTCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	31807566	31804828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31805204_31806863_31806939_31807366
ENSMUST00000067976.9	chr1	-	3088	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_3	33.6760506723827	665	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTTGCTCTTTTGTCT	NA	False	NA	-4	True	AATAAA	-24	NA	191129238	191084171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
ENSMUST00000067996.7	chr2	+	2834	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	0	0	0	0	multi-exon	FALSE	canonical	3	3891	junction_1	4471.27957761808	2731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29956467	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUST00000068006.9	chr18	+	2903	15	FSM	ENSMUSG00000039616.11	ENSMUST00000068006.9	2903	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	5.18878303533257	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCCTGCCATTATTGAG	NA	False	NA	15	True	ATTAAA	-15	NA	24786747	24834632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24787125_24793046_24793137_24797073_24797141_24799066_24799709_24803621_24803699_24807287_24807488_24809616_24809734_24812442_24812869_24816185_24816349_24819683_24819763_24821994_24822120_24825574_24825681_24828930_24829070_24832909_24833015_24834442
ENSMUST00000068023.8	chr7	+	2161	9	FSM	ENSMUSG00000054793.9	ENSMUST00000068023.8	2161	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	7.9912061042123	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGGTGGCTGTGTGTCT	6401	False	NA	NA	False	ATTAAA	-17	NA	24181447	24203964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24181588_24198580_24198728_24198937_24199091_24199348_24199484_24199900_24200066_24200156_24200248_24200989_24201163_24202090_24202220_24202936
ENSMUST00000068025.13	chr9	-	4530	10	FSM	ENSMUSG00000054792.16	ENSMUST00000068025.13	4530	10	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_9	1.68508343201146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCAGTTTCCTGATTG	1958	False	NA	-2	True	AATAAA	-17	NA	110305762	110254993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265302_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
ENSMUST00000068031.8	chr11	-	5221	36	FSM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	0	0	0	0	multi-exon	FALSE	canonical	3	1094	junction_4	183.786113485769	1734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915015	98883768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ENSMUST00000068044.14	chr14	-	4926	10	FSM	ENSMUSG00000022094.16	ENSMUST00000068044.14	4926	10	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_9	2.18298696715428	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGAGTCCCAAGTGT	NA	False	NA	0	True	AATAAA	-13	NA	70588874	70540917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70551049_70551220_70553886_70554074_70556110_70556390_70568717_70568816_70588728
ENSMUST00000068045.14	chr7	-	3877	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_13	138.805763569097	2967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28661765	28592672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUST00000068054.9	chr6	-	2364	10	FSM	ENSMUSG00000006906.11	ENSMUST00000068054.9	2364	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	7.14920352984241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTCCAGAGTGATT	NA	False	NA	-17	True	AATAAA	-13	NA	83549711	83520205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
ENSMUST00000068056.12	chr17	+	1739	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_1	149.184985839729	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	False	NA	37	True	AATGAA	-26	NA	35460721	35472683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUST00000068058.14	chr5	-	4557	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTTTGGCTCCTATTT	NA	False	NA	NA	False	ATTAAA	-26	NA	74229092	74159386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ENSMUST00000068058.14-0	chr5	-	3234	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	11	1312	0	-1312	multi-exon	FALSE	canonical	3	162	junction_8	42.7755771439732	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74229081	74160698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ENSMUST00000068088.8	chr15	+	1504	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	0	1099	0	-1097	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCTAAAGTTATATAT	NA	False	NA	1	True	ATTAAA	-11	NA	87509430	87642466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
ENSMUST00000068106.5	chrX	+	2393	2	FSM	ENSMUSG00000054850.5	ENSMUST00000068106.5	2393	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCCTGGCTGCCTCCTG	NA	False	NA	14	True	AAGAAA	-15	NA	55419945	55423159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_55420569_55421389
ENSMUST00000068135.13	chr9	+	3631	9	FSM	ENSMUSG00000031994.14	ENSMUST00000068135.13	3631	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	5.53257399408268	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGTCTAGTCTGGTT	NA	False	NA	NA	False	ACTAAA	-18	NA	30853857	30874152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_30854898_30862561_30862802_30863890_30864027_30864651_30864820_30865762_30866068_30867791_30867976_30870209_30870383_30870497_30870674_30872943
ENSMUST00000068140.6	chr9	-	1712	1	FSM	ENSMUSG00000054871.6	ENSMUST00000068140.6	1712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTTTCCTTTATTT	NA	False	NA	3	True	AATACA	-19	NA	123089829	123088117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_123088100_123089800
ENSMUST00000068156.8	chr19	-	10838	72	FSM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_58	9.97459578127363	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTCAATGGATATTT	NA	False	NA	-27	True	CATAAA	-16	NA	16758291	16593049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ENSMUST00000068169.12	chr19	-	5276	33	FSM	ENSMUSG00000054874.13	ENSMUST00000068169.12	5276	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	28.1349808679071	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTTGGCAGTTTTATT	NA	False	NA	-7	True	NA	NA	NA	5738177	5714667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ENSMUST00000068225.15	chr2	+	2152	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	431	377	0	-377	multi-exon	FALSE	canonical	3	927	junction_3	141.2501327433	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTTTTAAGCGTAAGTT	NA	False	NA	18	True	AATAAA	-21	NA	119449209	119480264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUST00000068237.12	chr5	+	7303	17	FSM	ENSMUSG00000038342.16	ENSMUST00000068237.12	7303	17	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_15	14.8438486838825	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTTCTGTGTGACCTTC	NA	False	NA	20	True	AATAAA	-21	NA	123532862	123595995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123533406_123578098_123578206_123578875_123578962_123580344_123580435_123580790_123580833_123581092_123581265_123581938_123582029_123582507_123582600_123583530_123584186_123585240_123585363_123585481_123585639_123587352_123587478_123587958_123588058_123588158_123588287_123588489_123588614_123590600_123590731_123591454
ENSMUST00000068240.13	chr6	+	5814	9	FSM	ENSMUSG00000029775.15	ENSMUST00000068240.13	3951	9	28	-1891	0	0	multi-exon	FALSE	canonical	3	93	junction_1	36.2954456509353	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTTGCCATGATTGTC	-21	True	NA	31	True	AATAAA	-18	NA	30401894	30455178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30402150_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ENSMUST00000068242.9	chr6	-	4725	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGCTTTCTTTTGTTT	9240	False	NA	NA	False	AATATA	-21	NA	122463464	122430059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ENSMUST00000068242.9-0	chr6	-	2002	6	FSM	ENSMUSG00000040649.16	ENSMUST00000068242.9	4725	6	234	2489	168	-1330	multi-exon	FALSE	canonical	3	62	junction_5	43.1907397482377	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGCATGTTTGCATG	9474	False	NA	-128	True	AATAAA	-14	NA	122463230	122432548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463049
ENSMUST00000068243.11	chr3	-	4773	14	FSM	ENSMUSG00000054942.14	ENSMUST00000068243.11	2689	14	-2	-2082	0	0	multi-exon	FALSE	canonical	1	3	junction_6	50.9351600816605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTTCTTAATGACT	NA	False	NA	-34	True	AATAAA	-13	NA	152046044	151979485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ENSMUST00000068259.10	chr6	+	5901	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	43.3720624650147	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTTGCCATGATTGTC	-21	True	NA	31	True	AATAAA	-18	NA	30401894	30455178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ENSMUST00000068259.10-0	chr6	+	2129	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	0	3772	0	566	multi-exon	TRUE	canonical	3	95	junction_2	43.3720624650147	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTTCCAGGCAGTTC	-21	True	NA	7	True	ATTAAA	-14	NA	30401894	30451406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ENSMUST00000068264.14	chr11	-	3196	13	FSM	ENSMUSG00000020160.19	ENSMUST00000068264.14	3196	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	0.897527467855751	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTATTGCATTTATTT	NA	False	NA	NA	False	AATAAA	-30	NA	18968958	18830661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ENSMUST00000068271.5	chr2	+	2034	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	85.0895998345274	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGAAGTGAGTGTATT	NA	False	NA	11	True	AATAAA	-15	NA	32519515	32525064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUST00000068282.7	chr17	-	3618	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	0	0	0	0	multi-exon	TRUE	canonical	3	301	junction_5	41.6619997386374	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGTGTTCTGAAATTAAA	3751	False	NA	-2	True	AATAAA	-18	NA	80203552	80155818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ENSMUST00000068282.7-0	chr17	-	2873	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	72	673	0	0	multi-exon	FALSE	canonical	3	301	junction_5	41.6619997386374	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3823	False	NA	NA	False	ATTAAA	-21	NA	80203480	80156491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ENSMUST00000068286.12	chrX	-	2537	15	FSM	ENSMUSG00000031392.19	ENSMUST00000068286.12	2537	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	113.226610415231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067521	73057531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73057732_73059011_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUST00000068304.13	chr1	-	8006	22	FSM	ENSMUSG00000005886.15	ENSMUST00000068304.13	8006	22	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	11.9773027979143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATTTAATAAATTTTAAT	NA	False	NA	-53	True	AATAAA	-18	NA	13444307	13209382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ENSMUST00000068304.13-0	chr1	-	5884	22	FSM	ENSMUSG00000005886.15	ENSMUST00000068304.13	8006	22	0	2122	0	1194	multi-exon	FALSE	canonical	3	14	junction_10	11.9773027979143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGCAGCCCACTTTGAT	NA	False	NA	-12	True	AATAAA	-19	NA	13444307	13211504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13444161
ENSMUST00000068326.14	chr5	+	2898	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.5084702897938	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	-4	True	NA	6	True	AATAAA	-22	NA	120649232	120672089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ENSMUST00000068333.14	chr1	-	1951	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_9	154.241693455434	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGCCAGCGTGTGGAACA	NA	False	NA	15	True	AATAAA	-36	NA	78465534	78401704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ENSMUST00000068340.3	chrX	+	3698	5	FSM	ENSMUSG00000054994.3	ENSMUST00000068340.3	3698	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	53.6516542149448	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134395336	134405343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134395469_134395666_134395786_134400016_134400317_134401619_134402205_134402781
ENSMUST00000068367.14	chr9	-	3605	17	FSM	ENSMUSG00000032396.18	ENSMUST00000068367.14	3605	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGCTCAAATTGATTC	5056	False	NA	NA	False	NA	NA	NA	64248570	64214038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ENSMUST00000068387.11	chr15	+	9566	31	FSM	ENSMUSG00000055024.13	ENSMUST00000068387.11	9566	31	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	16.0257085126784	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTCACTTCTTTGG	2909	False	NA	22	True	AATAAA	-22	NA	81469597	81536278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ENSMUST00000068407.6	chr15	+	1037	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTATTCTATTAGGGAA	NA	False	NA	NA	False	ATTAAA	-23	NA	76784109	76785505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76784193_76784551
ENSMUST00000068408.14	chr10	+	500	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	5732	junction_1	1157.99510649513	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
ENSMUST00000068411.5	chr12	-	7542	30	FSM	ENSMUSG00000021182.17	ENSMUST00000068411.5	7542	30	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_4	21.6322633049711	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCCTGGTTTTCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	100995315	100877781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ENSMUST00000068421.13	chr8	-	2667	10	FSM	ENSMUSG00000031921.18	ENSMUST00000068421.13	2667	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	7.27247474309048	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTCTAGCTGGTTCT	NA	False	NA	-2	True	ATTAAA	-15	NA	107823177	107796033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ENSMUST00000068439.13	chr19	-	1449	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	56	1066	56	124	multi-exon	FALSE	canonical	3	193	junction_3	18.3938395484285	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGACCTCTTAGTTGAC	NA	False	NA	-18	True	AATAAA	-18	NA	40260004	40210682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
ENSMUST00000068449.4	chr9	-	2971	2	FSM	ENSMUSG00000055069.4	ENSMUST00000068449.4	2971	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAGAACATAAATTAT	NA	False	NA	NA	False	NA	NA	NA	53617532	53595409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_53598037_53617188
ENSMUST00000068457.15	chr15	+	3351	9	FSM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	61.4527257328754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGTTCACT	NA	False	NA	NA	False	TATAAA	-21	NA	93296280	93389379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUST00000068505.10	chr1	-	3225	21	FSM	ENSMUSG00000026509.16	ENSMUST00000068505.10	3225	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	16.2692962355475	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCACCATGCCTTGTTT	NA	False	NA	-6	True	AATAAA	-13	NA	182345089	182294824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182310100_182310113_182311767_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ENSMUST00000068513.11	chr2	-	1872	15	FSM	ENSMUSG00000040272.15	ENSMUST00000068513.11	1872	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.22523920937245	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTTCATTCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	93680024	93665782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93679954
ENSMUST00000068519.7	chr12	+	4977	6	FSM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	3.86781592116274	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGATGTAGTCCTTCCC	3459	False	NA	17	True	AATAAA	-19	NA	80837332	80927609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920922_80921351_80923869
ENSMUST00000068532.10	chr14	+	1324	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	10.2097992144802	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGACACTGTCTTTGTC	537	False	NA	14	True	AATAAA	-24	NA	47069581	47091650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
ENSMUST00000068567.5	chr10	-	5105	16	FSM	ENSMUSG00000039697.17	ENSMUST00000068567.5	5105	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	2.09337579574768	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTTCCTAAAGACTC	NA	False	NA	0	True	AATAAA	-22	NA	30679103	30521579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_30523648_30523962_30524037_30524440_30524537_30528931_30529085_30530306_30530439_30538289_30538438_30565699_30565869_30566752_30567784_30570064_30570250_30572063_30572190_30574125_30574240_30577914_30578023_30580596_30580677_30598641_30598863_30647715_30647837_30678824
ENSMUST00000068581.9	chr10	+	3071	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAACCTGCATGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	56253425	56266511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_56253615_56263629
ENSMUST00000068586.13	chr2	-	2445	15	FSM	ENSMUSG00000040434.17	ENSMUST00000068586.13	2445	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	34.8762389144289	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTTTTGTCTGT	NA	False	NA	0	True	NA	NA	NA	92201402	92195390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ENSMUST00000068603.8	chr13	-	5847	36	FSM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_26	10.4750042618471	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTAGAGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	96028503	95763681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
ENSMUST00000068613.5	chr1	+	1353	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	0	838	0	-838	multi-exon	FALSE	canonical	3	32	junction_2	3.29983164553722	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAACGTTTACTGTTTT	NA	False	NA	12	True	AGTAAA	-25	NA	131455640	131466772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
ENSMUST00000068641.8	chr7	+	1329	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAATTGTAATTAAATCT	NA	False	NA	84	True	AATAAA	-16	NA	27173192	27176789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27173297_27175564
ENSMUST00000068686.13	chr11	-	1621	6	FSM	ENSMUSG00000006056.14	ENSMUST00000068686.13	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_5	66.2751838926155	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATGTGAGTACACTATC	4211	False	NA	-2	True	NA	NA	NA	96002790	95990151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95991229_95993473_95993579_95994042_95994177_95994283_95994387_95998256_95998431_96002762
ENSMUST00000068690.7	chr10	-	5985	2	FSM	ENSMUSG00000057337.14	ENSMUST00000068690.7	5985	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAAAGTCTGTAGTGGTT	NA	False	NA	NA	False	AATGAA	-5	NA	60024529	60017355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_60022706_60023894
ENSMUST00000068693.12	chr5	-	1790	6	FSM	ENSMUSG00000055235.12	ENSMUST00000068693.12	2364	6	47	527	0	0	multi-exon	FALSE	canonical	3	12	junction_3	2.85657137141714	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTTTGGTTTTCTTTT	NA	False	NA	-1	True	AATACA	-18	NA	24935678	24917262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24917750_24917847_24917952_24920523_24920660_24922964_24923386_24927632_24927775_24935178
ENSMUST00000068697.11	chr6	-	3251	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACTCGAATTTCTTTGG	8465	False	NA	-9	True	AATAAA	-18	NA	72876962	72818096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ENSMUST00000068697.11-0	chr6	-	1856	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	0	1395	0	60	multi-exon	FALSE	canonical	3	1059	junction_2	56.146880788003	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	8465	False	NA	-24	True	AATAAA	-24	NA	72876962	72819491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ENSMUST00000068700.7	chr9	-	4163	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_5	13.1969693490589	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCTTACCATCTCC	5751	False	NA	-1	True	AATAAA	-20	NA	108455938	108449509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
ENSMUST00000068705.13	chr1	-	2171	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	201.827896981562	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462090	165419808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ENSMUST00000068714.7	chr17	-	5568	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	-484	3352	0	-3352	multi-exon	FALSE	canonical	3	87	junction_5	16.1956574342597	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGTTGATTCTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	80787882	80704531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ENSMUST00000068725.10	chr1	-	1259	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	34	624	0	0	multi-exon	FALSE	canonical	3	760	junction_6	70.0437181264644	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTGAATGCTACACCC	NA	False	NA	-24	True	AATAAA	-17	NA	184578044	184545888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
ENSMUST00000068747.14	chr2	+	7614	14	FSM	ENSMUSG00000005506.17	ENSMUST00000068747.14	7614	14	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_13	169.345415711454	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2463	False	NA	15	True	ATTAAA	-15	NA	90770887	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ENSMUST00000068755.14	chrX	+	2823	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	79.1296404642407	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTGTATATGA	NA	False	NA	10	True	AATAAA	-21	NA	134786601	134791830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ENSMUST00000068795.4	chr5	-	1648	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	0	0	0	0	multi-exon	FALSE	canonical	3	1678	junction_1	0	1523	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCTGTGTTTAGTTTA	NA	False	NA	41	True	AAGAAA	-22	NA	36954116	36952210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36953289_36953546
ENSMUST00000068805.14	chr1	+	2009	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_5	43.4650340351123	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080917	131101215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ENSMUST00000068822.4	chr4	-	3494	4	FSM	ENSMUSG00000028389.13	ENSMUST00000068822.4	3494	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	14.142135623731	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGGTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-19	NA	62126683	62107776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126556
ENSMUST00000068825.8	chr5	+	3269	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGTCTGACGCAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	24890821	24915376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUST00000068825.8-1	chr5	+	2593	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	163	513	0	-511	multi-exon	FALSE	canonical	3	384	junction_1	91.6660977100463	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACCACAGCAAGTTAT	NA	False	NA	7	True	ATTAAA	-16	NA	24890984	24914863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUST00000068856.5	chr9	+	1391	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	0	0	0	0	multi-exon	TRUE	canonical	3	166	junction_1	20.9105236663265	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	8	True	AATATA	-19	NA	56858161	56890490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ENSMUST00000068879.11	chr3	+	6712	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	6.92218655243173	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCACATGGGAGTTGTC	NA	False	NA	41	True	AATAAA	-38	NA	103821466	103873952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ENSMUST00000068891.12	chr13	+	4640	8	FSM	ENSMUSG00000038068.16	ENSMUST00000068891.12	4640	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.49079939630896	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTTAGCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	47276131	47401467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_47276350_47360835_47361027_47373969_47374075_47382415_47382477_47390878_47391078_47393192_47393338_47396339_47396430_47397836
ENSMUST00000068892.15	chr8	-	3307	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26330815	26306023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ENSMUST00000068892.15-0	chr8	-	1964	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	17	1326	0	-336	multi-exon	FALSE	canonical	3	230	junction_15	813.355748325008	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26330798	26307349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ENSMUST00000068904.9	chr15	+	1523	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	47	2524	0	0	multi-exon	FALSE	canonical	3	14	junction_1	16.0078105935821	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCTGCATCGGCTAGCT	NA	False	NA	6	True	AATAAA	-13	NA	101310329	101325670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
ENSMUST00000068916.16	chr8	+	1483	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	15.9269164205337	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	17	True	AATAAA	-29	NA	26210063	26214914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUST00000068933.12	chr11	-	1903	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_2	138	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	-8	True	ATTAAA	-22	NA	102710005	102690404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102692022_102693666_102693743_102709795
ENSMUST00000068944.9	chr9	-	3273	6	FSM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	5.23832034148352	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGGCCCAAGCCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	65487322	65461665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261_65480412_65487219
ENSMUST00000068947.14	chr5	+	3976	19	FSM	ENSMUSG00000029098.18	ENSMUST00000068947.14	3976	19	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	8.72982683351794	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740383	35771145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_35740479_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ENSMUST00000068952.10	chr3	+	3559	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGGAGTGAGGTGTC	NA	False	NA	NA	False	AATAAA	-29	NA	159545308	159641659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUST00000068952.10-0	chr3	+	2614	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	0	945	0	175	multi-exon	FALSE	canonical	3	17	junction_6	6.38697020736374	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGCTTAAAATGTGTT	NA	False	NA	20	True	ATTAAA	-31	NA	159545308	159640714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUST00000068958.9	chr17	-	2265	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAACGTGTTCATTTA	NA	False	NA	NA	False	AATAAA	-12	NA	79662520	79641155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79643146_79662245
ENSMUST00000068958.9-0	chr17	-	1985	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	0	280	0	-280	multi-exon	FALSE	canonical	3	71	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTTATTGCAAAGTCTA	NA	False	NA	-12	True	AATATA	-17	NA	79662520	79641435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79643146_79662245
ENSMUST00000068967.11	chr9	+	3468	25	FSM	ENSMUSG00000036466.18	ENSMUST00000068967.11	6680	25	-60	3272	0	0	multi-exon	FALSE	canonical	2	5	junction_22	6.84348838921594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGTCTCACATAACTT	NA	False	NA	NA	False	AATAAA	-17	NA	64292907	64613215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64613008
ENSMUST00000068996.13	chr7	-	1126	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	38.0292285252044	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012491	136977302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
ENSMUST00000069000.9	chr9	+	2482	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	17.0269394392142	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTTGTCTGTGACTG	NA	False	NA	NA	False	AATAAA	-15	NA	65121971	65146500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ENSMUST00000069004.14	chr10	+	3024	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_2	11.5134703716994	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCTGACTTCTATTTG	NA	False	NA	6	True	AATAAA	-16	NA	52109714	52197472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ENSMUST00000069005.10	chr12	+	1771	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGGTTTGTGTCCCTT	NA	False	NA	NA	False	NA	NA	NA	12312177	12423396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ENSMUST00000069005.10-0	chr12	+	4727	12	FSM	ENSMUSG00000020589.18	ENSMUST00000069005.10	1771	12	12	-2968	0	2968	multi-exon	FALSE	canonical	3	60	junction_1	14.2718586881045	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGTATATGATGCA	NA	False	NA	NA	False	ATTAAA	-25	NA	12312189	12426364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_12312240_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ENSMUST00000069025.14	chr3	-	2681	13	FSM	ENSMUSG00000055436.19	ENSMUST00000069025.14	1643	13	-88	-950	0	0	multi-exon	FALSE	canonical	3	86	junction_3	173.80710492446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157742276	157716555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157717841_157717946_157718086_157718416_157718534_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ENSMUST00000069044.7	chr7	-	2866	3	FSM	ENSMUSG00000055452.7	ENSMUST00000069044.7	2866	3	0	0	0	0	multi-exon	FALSE	non_canonical	3	133	junction_2	19.5	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCCTGAGGACCAGCCC	7184	False	NA	NA	False	NA	NA	NA	3161963	3159019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3160168_3160215_3161875_3161904
ENSMUST00000069057.13	chr11	+	4547	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	33.5644192461903	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	8843	False	NA	15	True	AATAAA	-19	NA	75542335	75564736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUST00000069064.7	chr16	+	1297	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	15.4171171105366	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	12	True	AATAAA	-16	NA	16964842	16966710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
ENSMUST00000069066.14	chr12	+	4820	13	FSM	ENSMUSG00000020589.18	ENSMUST00000069066.14	9452	13	30	4602	0	2968	multi-exon	FALSE	canonical	3	12	junction_2	32.1829621936135	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTTGTATATGATGCA	NA	False	NA	NA	False	ATTAAA	-25	NA	12312169	12426364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_12312240_12326343_12326417_12354181_12354324_12390679_12390760_12408045_12408168_12409213_12409320_12411435_12411573_12412015_12412094_12412252_12412370_12412461_12412542_12414720_12414848_12419894_12419966_12422747
ENSMUST00000069077.10	chrX	+	1200	9	FSM	ENSMUSG00000067768.13	ENSMUST00000069077.10	1200	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	80.9281123899477	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	18	True	AATAAA	-18	NA	72257954	72266059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72258088_72258379_72258463_72258833_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUST00000069098.7	chr2	-	7864	15	FSM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	3.79580864445326	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGCCTTTTATGTCTT	7519	False	NA	-2	True	NA	NA	NA	156921174	156857718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
ENSMUST00000069107.14	chr16	+	5099	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTCACTGTGTTGCC	NA	False	NA	17	True	AAAAAG	-33	NA	16801245	16865317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUST00000069107.14-0	chr16	+	2922	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	0	2177	0	527	multi-exon	FALSE	canonical	3	513	junction_8	49.657420140398	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGATAAGATTCAGTGT	NA	False	NA	31	True	AATAAA	-21	NA	16801245	16863140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUST00000069125.8	chr10	-	1722	2	FSM	ENSMUSG00000049872.9	ENSMUST00000069125.8	5323	2	0	3601	0	-3601	multi-exon	FALSE	canonical	3	31	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTTTCTGGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	33972515	33967411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_33968512_33971893
ENSMUST00000069128.8	chr4	+	3069	3	FSM	ENSMUSG00000046667.15	ENSMUST00000069128.8	3069	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	12.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGGAAGAGAATTTCCT	16	False	NA	NA	False	AATAAA	-18	NA	12140316	12146731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_12140606_12143409_12143460_12144001
ENSMUST00000069168.13	chr10	-	6526	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATACTTTGCAGTTTGTT	4474	False	NA	-12	True	AATAAA	-13	NA	117212875	117180577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000069168.13-0	chr10	-	3913	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	-3	2616	0	1750	multi-exon	FALSE	canonical	3	507	junction_5	44.0656076524286	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGCAGTGTCTCCTA	4471	False	NA	-3	True	AATAAA	-17	NA	117212878	117183193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000069180.8	chr14	-	4556	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	4.78423336480244	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCGTGAGTTTGTATA	NA	False	NA	-1	True	ATTAAA	-18	NA	25769463	25712065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
ENSMUST00000069195.5	chr4	+	4639	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATGCTGTGCAGGTTG	NA	False	NA	107	True	ATTAAA	-21	NA	136013377	136021253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136013793_136014382_136014627_136017273
ENSMUST00000069209.2	chrX	+	1427	5	FSM	ENSMUSG00000055555.2	ENSMUST00000069209.2	1427	5	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_4	18.2397231338636	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTTTACCTGTAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	52726792	52740408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_52727016_52729333_52729516_52735693_52735827_52738241_52738355_52739632
ENSMUST00000069221.12	chr9	-	2158	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	363	6929	0	0	multi-exon	FALSE	canonical	3	723	junction_1	80.8280493004688	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAAGTAGATTTTTCC	NA	False	NA	-1	True	AATAAA	-28	NA	88364249	88335990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUST00000069250.14	chr17	+	1749	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	1286.78268852981	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313416	37321524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ENSMUST00000069271.5	chr4	-	1861	4	FSM	ENSMUSG00000028610.17	ENSMUST00000069271.5	1861	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	4.18993502999218	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGAAAGCTTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	107541427	107533488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_107534267_107536449_107536673_107537842_107538052_107540776
ENSMUST00000069285.6	chr19	-	2810	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGGCCATCTCTCTG	7137	False	NA	-8	True	AATAAA	-25	NA	11796306	11754848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUST00000069285.6-0	chr19	-	2027	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	0	783	0	-783	multi-exon	FALSE	canonical	3	392	junction_5	58.7316779940774	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7137	False	NA	NA	False	NA	NA	NA	11796306	11755631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUST00000069292.14	chr6	-	3683	6	FSM	ENSMUSG00000030145.15	ENSMUST00000069292.14	3683	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	4.48998886412873	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGTGTTTCTATTTA	NA	False	NA	NA	False	AATAAA	-24	NA	118432489	118404279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431873_118432376
ENSMUST00000069304.14	chr11	+	2225	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_1	115.462537790991	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCTGTCTGTGCTTTAG	NA	False	NA	NA	False	AATAAA	-18	NA	50268545	50277354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUST00000069324.7	chr7	+	1096	2	FSM	ENSMUSG00000055633.7	ENSMUST00000069324.7	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGTTCTTACTTGCA	2919	False	NA	4	True	AATAAA	-15	NA	5054536	5056722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5054714_5055803
ENSMUST00000069330.14	chr9	-	1356	5	FSM	ENSMUSG00000001348.16	ENSMUST00000069330.14	1356	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	52.4374627532645	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8912	False	NA	-19	True	AATAAA	-21	NA	22043111	22038022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22043032
ENSMUST00000069345.6	chr16	+	3056	15	FSM	ENSMUSG00000022817.16	ENSMUST00000069345.6	3056	15	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_14	52.8724398714414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGATTACTGGTTCCCT	NA	False	NA	22	True	AATAAA	-23	NA	33650046	33769523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768223_33769026
ENSMUST00000069360.14	chrX	-	2216	8	FSM	ENSMUSG00000055653.14	ENSMUST00000069360.14	2216	8	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	17.9398086582293	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGGTCCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	51702798	51361302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_51361832_51403713_51403874_51454598_51454720_51476985_51477112_51485949_51486084_51517316_51518012_51671673_51671836_51702509
ENSMUST00000069419.8	chr19	+	1009	9	FSM	ENSMUSG00000025090.10	ENSMUST00000069419.8	1009	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.1686273153048	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGAGGTCCTTGTACAG	NA	False	NA	NA	False	AATACA	-14	NA	58500452	58541460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_58500498_58500742_58500868_58501047_58501134_58514279_58514397_58515703_58515870_58524992_58525095_58525693_58525797_58539859_58539948_58541283
ENSMUST00000069423.13	chr2	-	773	5	FSM	ENSMUSG00000027239.15	ENSMUST00000069423.13	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_4	477.436121381699	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGCTTCTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	91762125	91760172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91762038
ENSMUST00000069443.14	chr14	+	2863	7	FSM	ENSMUSG00000055717.14	ENSMUST00000069443.14	2863	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	8.46069343099804	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCTCACGCATGAATG	NA	False	NA	27	True	AATAAA	-17	NA	103887663	103942343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_103888345_103894368_103894509_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ENSMUST00000069449.7	chr7	-	2275	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	27.4779911929529	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGCTTGACGGCTCCTTT	NA	False	NA	-1	True	ATTAAA	-21	NA	113717016	113646016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ENSMUST00000069456.11	chr11	-	3171	9	FSM	ENSMUSG00000018501.18	ENSMUST00000069456.11	3171	9	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	63.6836664695116	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCGCACCATAAATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	62348149	62292208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_62294289_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62313700_62313894_62324388_62324526_62329163_62329342_62347973
ENSMUST00000069476.5	chr15	-	4426	1	FSM	ENSMUSG00000055745.5	ENSMUST00000069476.5	4426	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCGTATCTGCTATA	5027	False	NA	-17	True	ATTAAA	-14	NA	84442024	84437598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_84437600_84442000
ENSMUST00000069477.8	chrX	-	1685	4	FSM	ENSMUSG00000055746.10	ENSMUST00000069477.8	1685	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.56846672960488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCATTTGTAACACTA	NA	False	NA	NA	False	ATTAAA	-19	NA	153816288	153810196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153811648_153812583_153812673_153815451_153815557_153816248
ENSMUST00000069486.13	chr17	+	1134	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	34	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATATTTCTATTCTTAA	NA	False	NA	39	True	ATTAAA	-30	NA	80531869	80535926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_80532100_80533049_80533194_80535166
ENSMUST00000069503.13	chr11	+	1871	9	FSM	ENSMUSG00000020513.16	ENSMUST00000069503.13	1871	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	8.83087623059003	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCAGTCTGTTAAGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	86435816	86458186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_86436057_86439608_86439829_86440149_86440298_86443613_86443831_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ENSMUST00000069509.4	chrX	-	4120	8	FSM	ENSMUSG00000055780.11	ENSMUST00000069509.4	4120	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	4.17475405605784	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTATTAACTGGACAGA	NA	False	NA	NA	False	NA	NA	NA	50890021	50842835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_50846351_50854031_50854113_50882224_50882281_50885803_50885850_50886599_50886704_50887371_50887431_50889689_50889806_50889878
ENSMUST00000069530.13	chr15	+	2114	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	0	0	0	0	multi-exon	TRUE	canonical	3	579	junction_9	64.3868516598433	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900569	81924286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUST00000069533.12	chr4	-	2620	13	FSM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_12	208.332399997909	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGATGTTTTCAGTA	NA	False	NA	-7	True	AATAAA	-25	NA	122779704	122752839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
ENSMUST00000069536.12	chr6	-	3042	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_8	63.9987086646582	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	4823	False	NA	-8	True	AATAAA	-14	NA	72766237	72603360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ENSMUST00000069537.3	chr7	-	1658	8	FSM	ENSMUSG00000030629.16	ENSMUST00000069537.3	1658	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	283.434475744953	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84328559	84264261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84328517
ENSMUST00000069548.7	chr10	+	1782	15	FSM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.6447107422859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	8881	False	NA	10	True	ATTAAA	-16	NA	127159624	127165812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127159700_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ENSMUST00000069556.4	chrX	-	1360	4	FSM	ENSMUSG00000079349.10	ENSMUST00000069556.4	1360	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	7.03957069398096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATTCAATTTTCGCTT	NA	False	NA	NA	False	NA	NA	NA	153846141	153836340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153837456_153838390_153838480_153844474_153844576_153846086
ENSMUST00000069557.14	chr13	+	6584	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	16.5495887830752	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTGTTTATTTTC	NA	False	NA	13	True	AATAAA	-17	NA	56850822	56890190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ENSMUST00000069579.7	chr17	-	537	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTCTCATTTTTATTT	NA	False	NA	-3	True	AGTAAA	-18	NA	24048110	24043711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
ENSMUST00000069579.7-0	chr17	-	466	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	0	71	0	0	multi-exon	FALSE	canonical	3	7596	junction_3	2024.23060829431	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048110	24043782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
ENSMUST00000069580.12	chr6	-	1434	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_2	66.4266512779321	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8408	False	NA	NA	False	TATAAA	-15	NA	72339415	72336696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUST00000069595.13	chr6	-	1191	4	FSM	ENSMUSG00000055850.13	ENSMUST00000069595.13	1191	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	437.683548798546	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8447	False	NA	NA	False	TATAAA	-15	NA	72339376	72336696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72339299
ENSMUST00000069597.8	chr18	+	4249	13	FSM	ENSMUSG00000073563.4	ENSMUST00000069597.8	4249	13	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_11	67.2040838706167	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATAAAGGTAGTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	53995193	54088620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
ENSMUST00000069600.13	chr2	-	2612	17	FSM	ENSMUSG00000027634.15	ENSMUST00000069600.13	2612	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	53.8324948335111	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5927	False	NA	0	True	AATAAA	-22	NA	156833963	156769264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUST00000069614.7	chr13	+	2146	10	FSM	ENSMUSG00000035910.16	ENSMUST00000069614.7	6634	10	-249	4737	0	434	multi-exon	TRUE	canonical	3	14	junction_2	2.86744175568088	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGTTTCAGAGATAAT	NA	False	NA	NA	False	AATAAA	-21	NA	25239986	25389952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_25240547_25245217_25245273_25286315_25286393_25286503_25286636_25291573_25291721_25294049_25294105_25303229_25303390_25371658_25371760_25386147_25386451_25389396
ENSMUST00000069619.14	chrX	+	5825	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	27.0432957264827	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTATCTCTTGTAATC	NA	False	NA	19	True	AATAAA	-22	NA	41239577	41366062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ENSMUST00000069623.12	chr4	-	4531	28	FSM	ENSMUSG00000040964.17	ENSMUST00000069623.12	4531	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	66.4898478177367	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140393323	140241795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140296066_140296082_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140393066
ENSMUST00000069637.15	chr12	-	2188	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCATTTTTACTTCTTC	NA	False	NA	NA	False	NA	NA	NA	40495901	40365044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUST00000069637.15-0	chr12	-	1547	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	128	513	0	-513	multi-exon	FALSE	canonical	3	359	junction_6	45.6703965821071	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGGACTGAAGAAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	40495773	40365557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUST00000069652.8	chr1	+	7052	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGTGTCTGTCTCTGA	NA	False	NA	NA	False	AATAAA	-34	NA	184936313	185018956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ENSMUST00000069652.8-0	chr1	+	4411	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	0	2641	0	-67	multi-exon	FALSE	canonical	3	69	junction_28	11.2668558845177	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTCTAAATTCCCCATC	NA	False	NA	21	True	AATAAA	-27	NA	184936313	185016315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ENSMUST00000069660.13	chr7	+	6148	28	FSM	ENSMUSG00000032743.16	ENSMUST00000069660.13	6148	28	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4.90904934097212	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGTGTGGTACACTGGAT	NA	False	NA	NA	False	AATAAA	-16	NA	125307086	125473965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_125307121_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ENSMUST00000069673.4	chr11	-	5597	6	FSM	ENSMUSG00000034621.15	ENSMUST00000069673.4	5597	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.5185512946507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATATTTGTTTTCTGCT	9192	False	NA	-33	True	TATAAA	-12	NA	102399273	102368032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102372914_102378325_102378457_102379572_102379623_102391628_102391773_102398268_102398356_102398969
ENSMUST00000069674.6	chr4	-	974	3	FSM	ENSMUSG00000055900.15	ENSMUST00000069674.6	974	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTTTTTTTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	116413132	116410151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116410927_116411964_116412101_116413069
ENSMUST00000069690.5	chr12	+	2697	20	FSM	ENSMUSG00000021144.15	ENSMUST00000069690.5	2697	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	191.721939117719	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAATCTCATAAA	9368	False	NA	-9	True	ATTAAA	-8	NA	113061942	113100793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086860_113090399_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUST00000069692.10	chr12	-	1934	13	FSM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	0	504	0	-504	multi-exon	FALSE	canonical	2	4	junction_11	159.233493824495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACTTTGTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	40495773	40365548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40460574_40460953_40495664
ENSMUST00000069695.9	chr6	+	1546	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	17.1583263538524	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGTTCTGGAGAAT	NA	False	NA	10	True	ATTAAA	-21	NA	72332429	72336745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUST00000069709.15	chr5	-	3381	14	FSM	ENSMUSG00000055923.17	ENSMUST00000069709.15	3381	14	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_10	14.1333463585218	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAAGCCTATGGATGGG	NA	False	NA	-49	True	NA	NA	NA	77050034	77023832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764
ENSMUST00000069712.9	chr2	+	2313	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	-12	-502	0	502	multi-exon	FALSE	canonical	3	271	junction_3	303.991227943615	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATTTGTTTGGTCTGTC	NA	False	NA	11	True	AATAAA	-25	NA	181138979	181158551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUST00000069718.15	chr8	+	3564	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_7	44.2492937796752	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGTCCGTGCTTTTCTCC	NA	False	NA	16	True	AATAAA	-24	NA	92040152	92395067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUST00000069722.13	chrX	+	1851	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	76.3282385490455	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326302	73333757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUST00000069731.12	chrX	+	799	5	FSM	ENSMUSG00000062170.13	ENSMUST00000069731.12	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_2	146.787899705664	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805444	67848173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67805838_67807537_67807616_67815650_67815748_67847210_67847300_67848031
ENSMUST00000069747.6	chr2	+	1101	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	0	4725	0	-4725	multi-exon	FALSE	canonical	3	432	junction_1	48.4355241532493	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	360	False	NA	4	True	ATTAAA	-17	NA	112285341	112297782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
ENSMUST00000069756.11	chr13	-	4052	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	12.8640730330638	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAGTCCACTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100689006	100633014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
ENSMUST00000069772.16	chr7	+	2297	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	17.4414472344658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTAGTGTGGCTGC	5492	False	NA	7	True	AATAAA	-14	NA	45546364	45566837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ENSMUST00000069782.11	chr12	+	3295	13	FSM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	4.43471156521669	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATAGATGACT	NA	False	NA	NA	False	GATAAA	-19	NA	100745315	100838869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUST00000069792.14	chr1	-	3874	8	FSM	ENSMUSG00000002881.15	ENSMUST00000069792.14	3874	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	3.6922422809486	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTTAGAGTGCTTTG	NA	False	NA	0	True	AATAAA	-21	NA	52539838	52496452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
ENSMUST00000069800.6	chr7	-	2955	2	FSM	ENSMUSG00000055978.6	ENSMUST00000069800.6	2955	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGGTTTTTGTTTGCT	9515	False	NA	NA	False	AATAAA	-21	NA	45315818	45298014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45300773_45315621
ENSMUST00000069803.5	chrX	-	450	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	19	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135858774	135856013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135856232_135857483_135857589_135858647
ENSMUST00000069805.14	chr3	-	5559	27	FSM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_26	26.7970677544519	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTGTCTCTTTTCTTT	3812	False	NA	1	True	TATAAA	-43	NA	89867936	89846787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ENSMUST00000069808.13	chr6	+	1658	10	FSM	ENSMUSG00000058440.15	ENSMUST00000069808.13	1658	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_9	124.499987604739	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATGTATGGTTTGGGC	9944	False	NA	2	True	AATAAA	-18	NA	30089887	30144854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ENSMUST00000069837.4	chr11	+	5228	36	FSM	ENSMUSG00000056427.11	ENSMUST00000069837.4	5228	36	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	2.67016776970425	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAAGGGTAGAGAAACGG	NA	False	NA	NA	False	AATAAA	-17	NA	35012050	35599334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_35012539_35062399_35062472_35068609_35068682_35125663_35125736_35399049_35399122_35435555_35435628_35455451_35455524_35461394_35461559_35469792_35469935_35479759_35479832_35485788_35485861_35490242_35490315_35501418_35501563_35503099_35503264_35512834_35512986_35514267_35514343_35520549_35520694_35521669_35521814_35523538_35523703_35524728_35524862_35539859_35539929_35541926_35541999_35542574_35542647_35550165_35550238_35552012_35552177_35554888_35555014_35560900_35560999_35566671_35566812_35570228_35570323_35574863_35575002_35577082_35577324_35579379_35579511_35589132_35589288_35591030_35591317_35593938_35594148_35598733
ENSMUST00000069862.11	chr5	+	3038	4	FSM	ENSMUSG00000056014.16	ENSMUST00000069862.11	3038	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	4.92160768674447	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGGACACTCTCCTT	1842	False	NA	49	True	AATAAA	-16	NA	138621155	138647098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138621251_138634425_138634553_138637756_138637850_138644375
ENSMUST00000069870.11	chr2	+	6981	6	FSM	ENSMUSG00000017418.15	ENSMUST00000069870.11	6981	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTAGCCTGTGTTTTCTTT	4658	False	NA	16	True	AATAAA	-18	NA	15060050	15087267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ENSMUST00000069937.11	chr5	-	3976	13	FSM	ENSMUSG00000029403.15	ENSMUST00000069937.11	3976	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.51108652888656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCCTCTTCCTTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	92190900	92153932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92155994_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190657
ENSMUST00000069949.13	chr6	-	1647	10	FSM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	2676.86493431088	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGCACTGCTACAACT	NA	False	NA	NA	False	AATAAA	-16	NA	51446874	51437911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000069958.15	chr13	+	3929	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	65	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATAGTGGATATTTATT	NA	False	NA	19	True	AATAAA	-24	NA	41040668	41114367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41041762_41107051_41107148_41111627
ENSMUST00000069965.9	chr10	+	3615	17	FSM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_16	22.6329405955126	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTGTGGAGTCAC	NA	False	NA	15	True	TATAAA	-2	NA	92996751	93077190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ENSMUST00000069968.13	chr13	-	1006	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	27.1751687376246	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	False	NA	-2	True	AATAAA	-17	NA	55661251	55654585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUST00000069994.11	chr6	+	2258	7	FSM	ENSMUSG00000056091.13	ENSMUST00000069994.11	2258	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	8.15304987242334	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTGTTTGTTCCTTC	NA	False	NA	20	True	NA	NA	NA	72074575	72131555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ENSMUST00000070039.14	chr17	-	1939	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	15.727267365169	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	78725560	78685313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUST00000070059.5	chr17	-	2649	10	FSM	ENSMUSG00000056133.6	ENSMUST00000070059.5	2649	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5.35412613473634	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACGTCTTGCCCAAATAT	NA	False	NA	NA	False	AATAAA	-21	NA	7652863	7630213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_7631457_7637075_7637208_7637754_7637891_7639195_7639414_7641821_7641948_7643808_7644039_7644334_7644517_7646602_7646748_7646972_7647027_7652680
ENSMUST00000070064.11	chr9	-	2666	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGTGTGTTTTAAGT	NA	False	NA	NA	False	AAAAAG	-12	NA	86453880	86436429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ENSMUST00000070064.11-0	chr9	-	2008	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	34	624	0	0	multi-exon	FALSE	canonical	3	372	junction_7	43.7311070317483	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	False	NA	-2	True	ATTAAA	-20	NA	86453846	86437053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ENSMUST00000070070.8	chr9	+	3003	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	1.95078331845327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGGCTTTGCTTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	54606842	54623599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
ENSMUST00000070070.8-0	chr9	+	2096	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	0	907	0	647	multi-exon	FALSE	canonical	3	8	junction_3	1.95078331845327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTGTTCTTTGTGCTC	NA	False	NA	NA	False	AATAAA	-20	NA	54606842	54622692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
ENSMUST00000070080.6	chr18	-	5808	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_5	29.4098197886352	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGATGTCATTGTT	NA	False	NA	-3	True	AATATA	-16	NA	20879461	20817655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ENSMUST00000070084.11	chr18	-	2921	3	FSM	ENSMUSG00000056130.11	ENSMUST00000070084.11	4204	3	187	1096	187	-1096	multi-exon	FALSE	canonical	3	7	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGACTATTGGTCTCAT	9692	False	NA	NA	False	AATAAA	-16	NA	46707413	46691453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46694140_46705867_46705971_46707281
ENSMUST00000070112.6	chr2	-	861	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	False	NA	-1	True	ATTAAA	-15	NA	35939418	35926337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
ENSMUST00000070112.6-0	chr2	-	770	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	91	0	91	0	multi-exon	FALSE	canonical	3	1222	junction_2	59.9184631163235	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTGTTTTATTATGCT	NA	False	NA	-1	True	ATTAAA	-15	NA	35939327	35926337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
ENSMUST00000070116.12	chr18	-	6036	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	76	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTGTCATCAGTAAC	NA	False	NA	-2	True	AATAAA	-17	NA	88912446	88883292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_88889043_88905332_88905458_88912285
ENSMUST00000070116.12-1	chr18	-	2698	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	12	3326	0	0	multi-exon	FALSE	canonical	3	70	junction_1	76	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATTGTTGCCTTTT	NA	False	NA	-5	True	ATTAAA	-25	NA	88912434	88886618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_88889043_88905332_88905458_88912285
ENSMUST00000070117.8	chr9	-	2853	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATATGTTGCATGGTG	NA	False	NA	NA	False	NA	NA	NA	114469142	114414945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000070117.8-1	chr9	-	2738	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	-110	225	0	-137	multi-exon	FALSE	canonical	3	122	junction_5	120.736887991548	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469252	114415170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000070118.14	chr19	+	1781	10	FSM	ENSMUSG00000024909.16	ENSMUST00000070118.14	1781	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	6.34209919681348	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5524777	5531881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUST00000070124.5	chr13	+	393	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAACATTACGAATCAC	3399	False	NA	-42	True	NA	NA	NA	21900591	21900984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21900600_21901000
ENSMUST00000070135.8	chr18	+	1911	5	FSM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	7.26291952316697	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATGCTTCATGTGGTG	NA	False	NA	2	True	AATAAA	-35	NA	80299532	80335927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUST00000070141.7	chrX	-	1646	4	FSM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	17.6823829464998	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTCTTTAGTTTCTTG	NA	False	NA	-5	True	AATAAA	-16	NA	153778846	153768770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153770173_153771107_153771197_153777179_153777280_153778791
ENSMUST00000070143.13	chr15	-	4764	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.18544972870135	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTAATGTGGTCTGAGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	57939865	57910700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
ENSMUST00000070150.11	chr4	+	3719	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	0	7137	0	1263	multi-exon	FALSE	canonical	3	63	junction_2	17.7200451466693	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTCTTTAAATTAGTT	-11	True	NA	16	True	ATTAAA	-23	NA	59626210	59754302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
ENSMUST00000070152.12	chr11	-	4219	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070152.12	4219	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	13.6440463206484	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGATGTTCTTCTGTA	2570	False	NA	-1	True	AATAAA	-21	NA	109364424	109341680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109364073
ENSMUST00000070165.7	chr7	-	4052	23	FSM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	31.0306766371922	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATCTCAGGAAAATCC	9998	False	NA	-5	True	AATAAA	-15	NA	101859327	101783409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ENSMUST00000070166.6	chr18	+	2605	14	FSM	ENSMUSG00000001700.11	ENSMUST00000070166.6	2605	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.64910390118809	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGTTTCCTGCATTT	2611	False	NA	NA	False	AATAAA	-26	NA	56565203	56636864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_56565430_56602604_56602725_56607090_56607203_56609674_56609742_56611920_56612025_56615692_56615789_56618283_56618356_56618447_56618529_56621822_56621935_56622686_56622810_56623742_56623831_56624966_56625072_56630391_56630486_56635659
ENSMUST00000070173.9	chr8	-	4883	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_1	24.3554408705735	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCATCCAGTGTCACCT	NA	False	NA	-5	True	AATAAA	-18	NA	71112388	71099084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ENSMUST00000070173.9-0	chr8	-	1432	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	0	3451	0	292	multi-exon	FALSE	canonical	3	150	junction_1	24.3554408705735	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTAGAGGGTATTTG	NA	False	NA	-17	True	NA	NA	NA	71112388	71102535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ENSMUST00000070189.10	chr6	+	3058	20	FSM	ENSMUSG00000056215.14	ENSMUST00000070189.10	3058	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	1.53806728381078	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTTTTCCAGACTAATTA	NA	False	NA	NA	False	AATAAA	-19	NA	34006382	34110969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_34006689_34013435_34013544_34016242_34016325_34020339_34020441_34025793_34025876_34033005_34033131_34039285_34039430_34047995_34048077_34049304_34049392_34050650_34050758_34055598_34055719_34063310_34063408_34067106_34067221_34069671_34069874_34072458_34072555_34093323_34093455_34104111_34104201_34106039_34106166_34108899_34109046_34110255
ENSMUST00000070198.14	chr3	+	4758	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGATGTGAGTATTGCTTG	NA	False	NA	13	True	AATAAA	-22	NA	136375884	136643488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUST00000070198.14-0	chr3	+	2810	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	0	1948	0	0	multi-exon	FALSE	canonical	3	173	junction_9	19.2887416789057	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	136375884	136641540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUST00000070203.14	chr5	-	4549	18	FSM	ENSMUSG00000036553.17	ENSMUST00000070203.14	4549	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	20.7093914138867	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTATCTTCTAGGTGTG	NA	False	NA	-5	True	AGTAAA	-15	NA	35886620	35854523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35886290
ENSMUST00000070210.6	chr19	-	2666	10	FSM	ENSMUSG00000013662.7	ENSMUST00000070210.6	2666	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	139.76408694654	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTCCCCACTTAGT	NA	False	NA	-18	True	AATAAA	-17	NA	32717186	32650221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32717041
ENSMUST00000070215.8	chr19	-	888	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	39.9229257444892	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTGGCTTTTTCAA	4887	False	NA	0	True	AATAAA	-27	NA	45738030	45736172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ENSMUST00000070219.9	chr18	+	3147	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	5.5	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTACCGTGTGTTATTGA	NA	False	NA	20	True	AATAAA	-14	NA	80090104	80162854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80090358_80123039_80123263_80160183
ENSMUST00000070257.14	chr11	+	2650	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_9	44.9846388062843	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGTGACATGCTCCAG	NA	False	NA	8	True	AATAAA	-20	NA	4587746	4633385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ENSMUST00000070326.14	chr9	+	2871	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_10	27.5493373131652	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACAGTGGTCAGTTTCT	NA	False	NA	10	True	AATAAA	-21	NA	83716770	83754439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ENSMUST00000070328.10	chr14	-	3086	5	FSM	ENSMUSG00000037833.15	ENSMUST00000070328.10	3086	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.39932429347437	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGACCTGTGTTCTG	NA	False	NA	NA	False	TATAAA	-11	NA	40575262	40535745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_40537918_40542571_40542793_40562181_40562307_40564330_40564548_40574911
ENSMUST00000070340.6	chr8	+	1064	1	FSM	ENSMUSG00000049184.7	ENSMUST00000070340.6	1064	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGAAATTGAACTCCAGCA	NA	False	NA	NA	False	NA	NA	NA	33876352	33877416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_33876400_33877400
ENSMUST00000070345.5	chr6	-	2244	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_6	46.7748745470139	908	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGTGGGTGGGCACT	NA	False	NA	67	True	NA	NA	NA	72322167	72295660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ENSMUST00000070353.4	chr2	+	1954	9	FSM	ENSMUSG00000035183.15	ENSMUST00000070353.4	1954	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_6	24.0624188310319	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124910043	124930597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_124910222_124910691_124910872_124922540_124922625_124922713_124922818_124923146_124923248_124924950_124925235_124927576_124927784_124929339_124929442_124929883
ENSMUST00000070368.8	chr3	-	2511	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTGCTTGAATCGTAT	NA	False	NA	0	True	AATAAA	-30	NA	58599821	58582358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_58583865_58598816
ENSMUST00000070368.8-0	chr3	-	1323	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	316	872	316	366	multi-exon	FALSE	canonical	3	158	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTATTCAGTACATCT	NA	False	NA	-25	True	AATAAA	-14	NA	58599505	58583230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_58583865_58598816
ENSMUST00000070395.9	chr11	-	1307	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	209	0	0	0	multi-exon	FALSE	canonical	3	448	junction_11	68.1448384565145	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	-21	True	AGTAAA	-16	NA	101308232	101297664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ENSMUST00000070458.11	chr7	+	2502	13	FSM	ENSMUSG00000038637.16	ENSMUST00000070458.11	2502	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	5.23609269080167	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGCCTGGCCTGGCT	416	False	NA	10	True	AATAAA	-14	NA	140774088	140789962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140774531_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
ENSMUST00000070478.4	chr4	+	4973	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	11.1018016555873	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTGGCCCACGTGTG	NA	False	NA	10	True	AATAAA	-18	NA	130519847	130553630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
ENSMUST00000070481.8	chr8	+	4221	2	FSM	ENSMUSG00000046794.10	ENSMUST00000070481.8	4221	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTCCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	35842894	35855293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_35842960_35851137
ENSMUST00000070515.2	chr14	-	2035	19	FSM	ENSMUSG00000022040.9	ENSMUST00000070515.2	2035	19	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_15	18.7001188350354	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTTTCTTGTGTTCTTG	NA	False	NA	-5	True	AATAAA	-16	NA	66361949	66321825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66354159_66354245_66361783
ENSMUST00000070522.14	chr9	+	3649	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_10	9.44264688775947	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCCTCTCTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	92424275	92490481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ENSMUST00000070524.5	chr6	-	5013	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	25.9786236911983	525	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATTGAAACATTACAT	4419	False	NA	-37	True	AATAAA	-12	NA	72593983	72585414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ENSMUST00000070532.8	chr4	+	823	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	4337	junction_3	149.244765402342	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202387	130209256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
ENSMUST00000070538.12	chr17	-	2069	6	FSM	ENSMUSG00000023460.14	ENSMUST00000070538.12	2069	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	22.1720544830649	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTTGCCGTGTGTTT	NA	False	NA	-4	True	AATAAA	-22	NA	66826724	66801506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
ENSMUST00000070565.15	chr12	-	1693	12	FSM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_11	66.0974737267458	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7660	False	NA	-3	True	AATATA	-18	NA	110807373	110774231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ENSMUST00000070575.14	chr11	-	3500	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_1	174.428237039028	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	1014	False	NA	-11	True	AATAAA	-22	NA	120881918	120852574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUST00000070577.7	chr8	-	2976	3	FSM	ENSMUSG00000031847.9	ENSMUST00000070577.7	2976	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTCTCTCACTGTTTCT	8541	False	NA	NA	False	AATAAA	-28	NA	117705682	117696332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_117698896_117700190_117700439_117705517
ENSMUST00000070597.13	chr6	+	3027	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTGATATCTGAAATTT	NA	False	NA	NA	False	AATATA	-25	NA	72575457	72585408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUST00000070597.13-0	chr6	+	1891	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	153	983	0	0	multi-exon	FALSE	canonical	3	404	junction_1	54.9894535342915	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAATTCCTTGCACAT	NA	False	NA	-29	True	NA	NA	NA	72575610	72584425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUST00000070607.9	chr4	-	6158	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_2	24.1993672437938	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAATTCCCTGTATT	NA	False	NA	-7	True	AATAAA	-16	NA	86530292	86497091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ENSMUST00000070607.9-1	chr4	-	3967	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	6	2185	0	-2185	multi-exon	FALSE	canonical	3	127	junction_2	24.1993672437938	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGAGGCACTAACGGT	NA	False	NA	-39	True	AATAAA	-24	NA	86530286	86499276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ENSMUST00000070635.13	chr6	+	2301	9	FSM	ENSMUSG00000029860.17	ENSMUST00000070635.13	2301	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.78439446261239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGCTAGTACTTGATT	NA	False	NA	3	True	TATAAA	-13	NA	42326802	42335326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUST00000070642.4	chr2	+	1504	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGGCAGTAGTTGGC	NA	False	NA	32	True	AATAAA	-26	NA	167530834	167532338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167530800_167532300
ENSMUST00000070658.16	chr16	+	3138	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_15	100.835804033091	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2927	False	NA	14	True	AATAAA	-15	NA	4704115	4756160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ENSMUST00000070673.9	chr17	-	3473	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_1	10.1775897605147	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTCCTTTCCTCATT	NA	False	NA	0	True	AATAAA	-15	NA	66079747	65958723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
ENSMUST00000070681.7	chr11	+	4283	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_3	37.1408131305711	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAATTTGTAAGTCAAA	NA	False	NA	27	True	AATAAA	-18	NA	60308087	60336103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ENSMUST00000070699.15	chr1	-	6528	29	FSM	ENSMUSG00000056536.15	ENSMUST00000070699.15	6528	29	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_6	10.4778678310864	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGTGATAAGACATT	NA	False	NA	-1	True	AATAAA	-19	NA	105586733	105446146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611
ENSMUST00000070705.6	chrX	-	7429	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	35.6300435026397	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTTTTTCATCCTT	2373	False	NA	-1	True	AATAAA	-16	NA	103024890	103000768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ENSMUST00000070726.10	chr18	-	3882	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	10.1153837126587	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTGTTCTCTTTCTTCT	NA	False	NA	0	True	ATTAAA	-18	NA	24736874	24712937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ENSMUST00000070731.11	chr13	+	5207	15	FSM	ENSMUSG00000021756.13	ENSMUST00000070731.11	5207	15	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_14	42.997686221565	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATGTAGTGTAAGGC	NA	False	NA	35	True	AATAAA	-36	NA	112611541	112643394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUST00000070742.14	chr9	-	4049	5	FSM	ENSMUSG00000032344.18	ENSMUST00000070742.14	4049	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	3.56195171219375	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGTAGTTGAATGTATC	5273	False	NA	-8	True	AATAAA	-16	NA	78350486	78337807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_78340550_78341594_78341698_78342722_78342966_78344584_78344805_78349745
ENSMUST00000070755.13	chr4	+	2870	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_12	66.7496464868725	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	25	True	NA	19	True	AGTAAA	-16	NA	11558971	11615805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ENSMUST00000070777.13	chr17	-	2384	19	FSM	ENSMUSG00000052752.16	ENSMUST00000070777.13	2384	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_16	143.532634909106	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24738182	24727823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478_24735574_24737715_24737774_24738104
ENSMUST00000070785.16	chr13	-	2561	6	FSM	ENSMUSG00000021327.20	ENSMUST00000070785.16	2561	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	21.2452347598232	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGGTTCTTACTTGGG	NA	False	NA	2	True	AATAAA	-23	NA	21586883	21571172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580748_21586841
ENSMUST00000070801.11	chrX	+	1802	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	294.754511792818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTACTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	143100799	143108193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
ENSMUST00000070850.8	chr19	+	999	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	0	0	0	0	multi-exon	FALSE	canonical	3	3100	junction_3	78.5295415043848	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGGCTGGTCTTTTA	1580	False	NA	NA	False	AATAAA	-29	NA	6952335	6954692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
ENSMUST00000070872.13	chr11	-	2354	6	FSM	ENSMUSG00000041920.15	ENSMUST00000070872.13	2354	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	8.5463442476886	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCCAAAAAACAAAAAAAAC	2874	False	NA	NA	False	NA	NA	NA	109364120	109343551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109363763
ENSMUST00000070877.7	chr15	+	1555	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	0	1022	0	597	multi-exon	FALSE	canonical	3	110	junction_2	9.36416040016402	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAGCAGTGGTTTTAA	49	False	NA	32	True	AATAAA	-42	NA	10981841	10995690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
ENSMUST00000070878.9	chr19	-	642	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	200.859752065963	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGAGTCTGTATTTCT	NA	False	NA	-3	True	TTTAAA	-35	NA	6957808	6955108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
ENSMUST00000070888.14	chr17	-	3358	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_8	10.0374299499424	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGAGGCCGATTGCTT	9587	False	NA	-2	True	AATAAA	-15	NA	24698052	24692526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ENSMUST00000070923.3	chr15	+	1784	2	FSM	ENSMUSG00000056665.3	ENSMUST00000070923.3	1784	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCACCTGGCCTGTCTT	4640	False	NA	NA	False	NA	NA	NA	74593052	74596488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_74593657_74595308
ENSMUST00000070932.4	chr4	+	387	3	FSM	ENSMUSG00000063245.12	ENSMUST00000070932.4	387	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGACTCTGTAAACAG	NA	False	NA	NA	False	AAAAAG	-35	NA	146739383	146742064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146739414_146740256_146740384_146741834
ENSMUST00000070951.8	chr13	+	1272	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	139.137342219837	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACAGACCATTCTATA	9708	False	NA	NA	False	NA	NA	NA	112937396	113004176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUST00000070968.14	chr1	+	5151	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGCGTAAGATGTTCTA	3263	False	NA	NA	False	NA	NA	NA	52158613	52201024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ENSMUST00000070968.14-0	chr1	+	3290	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	35	1826	0	479	multi-exon	FALSE	canonical	3	19	junction_12	6.79038842777054	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCCAGCTTTCTTAA	3298	False	NA	NA	False	AATAAA	-21	NA	52158648	52199198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ENSMUST00000070990.8	chr6	-	2122	12	FSM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	7.42677755109095	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTGGTATTTTCTTC	NA	False	NA	-11	True	AATAAA	-11	NA	72575326	72542916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
ENSMUST00000070996.11	chr11	-	1373	7	FSM	ENSMUSG00000078812.11	ENSMUST00000070996.11	1373	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	9665.3113547021	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9941	False	NA	-15	True	AATAAA	-20	NA	69812212	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69811988
ENSMUST00000071006.9	chr17	+	758	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	1664	junction_1	167.935225607971	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGTCCCTGTCCCTT	NA	False	NA	18	True	AATAAA	-20	NA	28059060	28070939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ENSMUST00000071023.12	chrX	-	4334	9	FSM	ENSMUSG00000036022.16	ENSMUST00000071023.12	4334	9	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_3	25.3743842289818	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGCCTCTCTTATTCC	NA	False	NA	-3	True	AATAAA	-34	NA	52358682	52332291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52335168_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ENSMUST00000071026.10	chr11	-	1286	7	FSM	ENSMUSG00000078812.11	ENSMUST00000071026.10	1286	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9685.27435508842	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9369	False	NA	-15	True	AATAAA	-20	NA	69812784	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69812647
ENSMUST00000071044.13	chr6	+	1247	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	22.7389913671443	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	False	NA	12	True	AATAAA	-23	NA	72521373	72539966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUST00000071056.14	chr7	+	3405	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTAGTGCCTTCTCTC	NA	False	NA	NA	False	NA	NA	NA	127503253	127509393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ENSMUST00000071056.14-0	chr7	+	1792	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	0	1613	0	0	multi-exon	FALSE	canonical	3	550	junction_9	38.261820946588	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGCCCCAAATGTTG	NA	False	NA	28	True	ATTAAA	-20	NA	127503253	127507780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ENSMUST00000071057.14	chr5	+	2799	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATCATTTTTTTTCTCC	NA	False	NA	5	True	AATAAA	-18	NA	124690926	124707723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ENSMUST00000071057.14-0	chr5	+	2080	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	32	687	0	-687	multi-exon	FALSE	canonical	3	73	junction_5	12.5669803088427	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTGTAATTCCTAT	NA	False	NA	2	True	NA	NA	NA	124690958	124707036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ENSMUST00000071065.8	chr13	-	2026	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGCTCTGTTCCACTT	NA	False	NA	1	True	AATAAA	-19	NA	53135109	53121244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_53123058_53134896
ENSMUST00000071087.12	chr1	+	4355	30	FSM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_1	28.6386316840114	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10108441	10206993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ENSMUST00000071093.9	chr4	+	6505	8	FSM	ENSMUSG00000032890.18	ENSMUST00000071093.9	6505	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	8.02546966010751	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGGCTTTCTGAGGAT	NA	False	NA	16	True	AATAAA	-21	NA	120712015	120753776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ENSMUST00000071095.14	chr12	-	2755	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTGTTCCTTGTC	NA	False	NA	0	True	ATTAAA	-19	NA	108145573	108072689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ENSMUST00000071095.14-0	chr12	-	2582	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	0	173	0	62	multi-exon	FALSE	canonical	3	469	junction_9	51.1017503505397	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTAGGACTCGAGTCC	NA	False	NA	-5	True	ATTAAA	-21	NA	108145573	108072862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ENSMUST00000071103.10	chr12	-	2458	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	50	2334	0	-2334	multi-exon	FALSE	canonical	3	1685	junction_15	174.121171601847	3002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	False	NA	-11	True	AATAAA	-14	NA	13299164	13269307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ENSMUST00000071106.6	chr12	+	3829	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	8.71421252896669	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTTGATATATCCT	NA	False	NA	NA	False	AATGAA	-23	NA	86288648	86338144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ENSMUST00000071108.14	chr4	-	2674	8	FSM	ENSMUSG00000028799.16	ENSMUST00000071108.14	2674	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.28260722659316	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAAAGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	128688681	128666896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128688643
ENSMUST00000071118.7	chr13	-	1030	1	FSM	ENSMUSG00000057762.7	ENSMUST00000071118.7	1030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1011	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAACGGCCGGGCATGGT	NA	False	NA	NA	False	NA	NA	NA	97235745	97234715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_97234700_97235700
ENSMUST00000071134.4	chr8	+	1868	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	7.03957069398096	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTATTGGAGATTTCT	NA	False	NA	27	True	AATAAA	-27	NA	124138162	124148754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
ENSMUST00000071152.14	chr11	-	3633	8	FSM	ENSMUSG00000020696.19	ENSMUST00000071152.14	3633	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	57.61306541161	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2743	False	NA	NA	False	AATAAA	-11	NA	82762036	82694647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577_82736722_82761833
ENSMUST00000071169.9	chr4	+	3999	15	FSM	ENSMUSG00000040945.14	ENSMUST00000071169.9	3999	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1566.2974279022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	1449	False	NA	28	True	AATAAA	-21	NA	140427851	140450531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140428061_140428454_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUST00000071169.9-0	chr4	+	2249	15	FSM	ENSMUSG00000040945.14	ENSMUST00000071169.9	3999	15	0	1750	0	-1750	multi-exon	FALSE	canonical	3	24	junction_1	1566.2974279022	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTTGTATTTCTTT	1449	False	NA	13	True	NA	NA	NA	140427851	140448781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140428061_140428454_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUST00000071172.7	chr9	-	760	1	FSM	ENSMUSG00000099980.2	ENSMUST00000071172.7	760	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAATGAATACTCCTAAG	NA	False	NA	NA	False	AAAAAG	-31	NA	85664680	85663920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_85663900_85664700
ENSMUST00000071207.14	chr7	+	1698	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	12.7373466624725	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545502	44550048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ENSMUST00000071215.5	chr14	+	616	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	33	True	AATAAA	-16	NA	20753073	20754493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20753266_20753357_20753477_20754188
ENSMUST00000071215.5-0	chr14	+	564	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	52	0	0	0	multi-exon	FALSE	canonical	3	1953	junction_1	51.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	33	True	AATAAA	-16	NA	20753125	20754493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20753266_20753357_20753477_20754188
ENSMUST00000071230.8	chr12	+	3405	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	0	0	0	0	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTAAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	78908592	78933784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ENSMUST00000071230.8-0	chr12	+	1450	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	266	1689	0	-1689	multi-exon	FALSE	canonical	3	3896	junction_3	411.382487498445	3127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGCTTCTTCCTTCTT	NA	False	NA	24	True	AATAAA	-17	NA	78908858	78932095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ENSMUST00000071233.7	chr18	+	7703	6	FSM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	92.9184588765871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTGACCTGTGGTT	NA	False	NA	52	True	NA	NA	NA	82932756	83023439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_82932849_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ENSMUST00000071250.13	chr12	-	2825	20	FSM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	3.93154724147013	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTTGGATTCCTTTCC	6200	False	NA	0	True	AATAAA	-28	NA	70274457	70237584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
ENSMUST00000071268.11	chr7	-	4720	19	FSM	ENSMUSG00000059981.13	ENSMUST00000071268.11	4720	19	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_2	21.6270292703766	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACAGGATGTCTCCCTTT	8433	False	NA	-5	True	AATAAA	-20	NA	126483875	126464849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUST00000071280.8	chr3	-	1777	6	FSM	ENSMUSG00000040374.14	ENSMUST00000071280.8	1777	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	21.3672646822189	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATGATTGTGCATTTAT	NA	False	NA	-4	True	AATAAA	-16	NA	5641188	5625563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5635546_5635690_5641097
ENSMUST00000071296.11	chr7	+	4201	3	FSM	ENSMUSG00000045411.17	ENSMUST00000071296.11	4201	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	56.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896865	43901736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43899024_43899444_43899484_43899732
ENSMUST00000071302.3	chr9	+	881	1	FSM	ENSMUSG00000063058.3	ENSMUST00000071302.3	881	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTCTGCAAGAGAACC	NA	False	NA	NA	False	NA	NA	NA	98738546	98739427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98738500_98739400
ENSMUST00000071329.8	chr7	-	1899	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	24.6373699895098	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTCCTTCGTCTCTG	9682	False	NA	-9	True	AGTAAA	-19	NA	25358406	25329370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ENSMUST00000071361.13	chr7	+	1182	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_2	41.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGAGCTGCGTGAGTGT	NA	False	NA	36	True	AATAAA	-30	NA	24206494	24215107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24206862_24209970_24210179_24214500
ENSMUST00000071402.7	chr3	+	5951	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	129.619635858152	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326034	129432144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUST00000071423.7	chr19	+	8591	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTGTCTTGAAT	NA	False	NA	17	True	ATTAAA	-17	NA	56536692	56591935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ENSMUST00000071423.7-0	chr19	+	2523	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	213	5855	213	-5855	multi-exon	FALSE	canonical	3	84	junction_1	12.4338248338956	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTAAACAAATTTCTTC	NA	False	NA	NA	False	AATAAA	-24	NA	56536905	56586080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ENSMUST00000071442.12	chr2	+	1485	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	4.24264068711928	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTCTGGGTTCACTGA	3126	False	NA	12	True	ATTAAA	-20	NA	25293082	25299506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUST00000071457.12	chr7	-	702	5	FSM	ENSMUSG00000030538.16	ENSMUST00000071457.12	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	297.709904941035	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2240	False	NA	-12	True	AATAAA	-15	NA	79882372	79876906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79882257
ENSMUST00000071462.7	chr15	-	1059	7	FSM	ENSMUSG00000022474.16	ENSMUST00000071462.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	406.121355699938	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845070	81835308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81842096_81842112_81844915
ENSMUST00000071465.9	chr11	+	2270	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	5.11262055005932	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTGTAGCTGCCTT	NA	False	NA	14	True	AATAAA	-20	NA	65698000	65720064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
ENSMUST00000071487.13	chr11	+	6614	19	FSM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	172.647003027336	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTGGTCTCCCA	NA	False	NA	14	True	AATAAA	-15	NA	57899889	57952857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932483_57933059_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ENSMUST00000071488.8	chr3	-	4038	31	FSM	ENSMUSG00000027933.12	ENSMUST00000071488.8	4038	31	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	39.1651914615801	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTGACATCTCTGTTC	NA	False	NA	-3	True	AATGAA	-24	NA	90340610	90298694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90299219_90299299_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ENSMUST00000071492.9	chr6	+	1643	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_2	62	652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTCTTATGGGTAGTG	8617	False	NA	32	True	AATAAA	-16	NA	86342627	86347040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86342802_86343591_86343733_86345712
ENSMUST00000071523.5	chr7	-	894	1	FSM	ENSMUSG00000086583.4	ENSMUST00000071523.5	894	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1287	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTTTCTATGAAGATT	NA	False	NA	NA	False	NA	NA	NA	114305398	114304504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_114304500_114305400
ENSMUST00000071539.10	chr11	-	2664	10	FSM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	113.78341999899	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7769	False	NA	-2	True	AATAAA	-19	NA	113456582	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUST00000071544.11	chr4	+	942	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	22.8875512014719	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTCTAGTCCCCTTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	83335967	83360323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
ENSMUST00000071555.13	chr11	-	1952	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	0	0	0	0	multi-exon	TRUE	canonical	3	5636	junction_4	454.292680988809	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTGTTTTTCTGGTTTGG	NA	False	NA	-21	True	AATAAA	-18	NA	120239368	120236515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ENSMUST00000071561.7	chr4	-	1547	3	FSM	ENSMUSG00000036078.17	ENSMUST00000071561.7	1547	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	290.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTCCTTATGTGTCTAA	3747	False	NA	NA	False	AATAAA	-17	NA	41741359	41738492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41739581_41740775_41740977_41741101
ENSMUST00000071562.3	chr11	-	2670	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTGTAGGCCCTGGCT	1637	False	NA	NA	False	AATAAA	-18	NA	75069661	75066767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75069214_75069437
ENSMUST00000071564.14	chr2	-	3567	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_20	31.6521721213569	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782393	11747385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ENSMUST00000071573.6	chr8	-	436	1	FSM	ENSMUSG00000062458.6	ENSMUST00000071573.6	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATTTCAAGGATCGGGG	NA	False	NA	NA	False	NA	NA	NA	48085799	48085363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48085400_48085800
ENSMUST00000071590.6	chr7	+	5728	17	FSM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	18.1597726789186	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTGCAAATGTATATTA	7920	False	NA	15	True	AATAAA	-21	NA	122570140	122601780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
ENSMUST00000071592.12	chr8	+	3472	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTTGTCTTTTAAAAC	1819	False	NA	NA	False	ATTAAA	-7	NA	106937567	106979426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUST00000071592.12-0	chr8	+	2285	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	87	1100	0	-1100	multi-exon	FALSE	canonical	3	978	junction_13	68.9507622326015	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1906	False	NA	26	True	AATAAA	-27	NA	106937654	106978326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUST00000071641.5	chr7	-	1019	1	FSM	ENSMUSG00000086583.4	ENSMUST00000071641.5	1019	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	114305470	114304451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_114304500_114305500
ENSMUST00000071648.12	chr17	-	3451	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	72.4463402955748	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343295	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ENSMUST00000071664.12	chr3	-	1276	10	FSM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_3	370.873576676127	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATAGTGATAGCT	NA	False	NA	-13	True	AATAAA	-22	NA	94949863	94940007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUST00000071667.9	chrX	-	1712	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_3	112.11402925395	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	False	NA	-18	True	AATAAA	-15	NA	162859146	162853700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
ENSMUST00000071698.13	chr19	-	3228	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	39.5783562189201	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	44058214	44023382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
ENSMUST00000071703.6	chr13	-	5554	28	FSM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	0	315	0	0	multi-exon	FALSE	canonical	3	16	junction_2	33.5472559435836	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59970961	59919689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ENSMUST00000071704.4	chr12	+	875	11	FSM	ENSMUSG00000060073.10	ENSMUST00000071704.4	875	11	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_2	1129.97747322679	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGATTTTCATTAAATTTTG	4814	False	NA	-25	True	NA	NA	NA	71021488	71041249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71021542_71025506_71025590_71030097_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000071711.4	chrX	-	2347	1	FSM	ENSMUSG00000059334.7	ENSMUST00000071711.4	2347	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGAGGTGGTGTTAGG	NA	False	NA	NA	False	AAAAAG	-12	NA	52778361	52776014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52776000_52778400
ENSMUST00000071718.12	chr1	-	1451	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	33	903	0	0	multi-exon	FALSE	canonical	3	1689	junction_3	62.8823305865805	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCGTTGTCATGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	161078756	161068584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
ENSMUST00000071739.12	chr7	-	2260	11	FSM	ENSMUSG00000057177.13	ENSMUST00000071739.12	2260	11	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_10	34.6278789416851	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937276	24927682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
ENSMUST00000071745.4	chr6	+	943	1	FSM	ENSMUSG00000063171.5	ENSMUST00000071745.4	943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	790	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGCATATGTTTC	NA	False	NA	13	True	ATTAAA	-17	NA	148256153	148257096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_148256200_148257100
ENSMUST00000071782.8	chr5	+	2536	5	FSM	ENSMUSG00000059991.8	ENSMUST00000071782.8	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	16.768646337734	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTTCTTGTTCTCTC	NA	False	NA	11	True	ATTAAA	-17	NA	144482711	144494288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_144483294_144484928_144485146_144490209_144490455_144492106_144492287_144492976
ENSMUST00000071792.7	chr15	+	1043	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	0	0	0	0	multi-exon	TRUE	canonical	1	74	junction_2	101.489839392917	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832705	76834929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
ENSMUST00000071804.10	chr7	-	2671	4	FSM	ENSMUSG00000056383.11	ENSMUST00000071804.10	2671	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	27.3901847788988	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	-14	True	AATAAA	-25	NA	41042684	41022346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41042650
ENSMUST00000071812.11	chr3	+	5756	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_11	23.9826757536325	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989277	88028355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ENSMUST00000071814.13	chrX	+	3817	7	FSM	ENSMUSG00000025529.15	ENSMUST00000071814.13	3817	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	3.71558280160133	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATAATTTTATTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	111513970	111544767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111537800_111537846_111541522_111541667_111542075
ENSMUST00000071841.7	chr17	-	2100	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_11	42.5343808432544	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCCTATTTCTGGCGAC	NA	False	NA	0	True	TATAAA	-17	NA	46991830	46985475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ENSMUST00000071848.7	chrX	+	842	6	FSM	ENSMUSG00000062170.13	ENSMUST00000071848.7	842	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	319.056484027515	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805539	67848173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67805838_67807537_67807616_67812561_67812700_67815650_67815748_67847210_67847300_67848031
ENSMUST00000071857.13	chr19	-	3812	18	FSM	ENSMUSG00000056917.14	ENSMUST00000071857.13	3812	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	22.9642417985895	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACTCTATTTGTGTTT	8144	False	NA	-9	True	AAAAAG	-18	NA	5713688	5701221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5712615_5712870_5713631
ENSMUST00000071858.5	chr12	+	1526	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	8.52447456836295	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGAGTTTCCTGTGT	8624	False	NA	17	True	AATAAA	-5	NA	17740856	17841934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
ENSMUST00000071874.8	chr15	+	4927	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_10	12.2043995518441	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95688723	95872632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ENSMUST00000071876.13	chr15	-	997	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	106.509389257473	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8086	False	NA	0	True	ATTAAA	-15	NA	85695897	85691172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
ENSMUST00000071881.10	chr5	+	952	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	90.7450641449256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGTGTGACTACAGCG	NA	False	NA	10	True	NA	NA	NA	140317614	140323892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
ENSMUST00000071891.12	chr11	+	2771	25	FSM	ENSMUSG00000020549.15	ENSMUST00000071891.12	2771	25	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_24	61.5767221304718	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTGACAACAGTTTGTA	NA	False	NA	10	True	AATAAA	-18	NA	64869863	64892895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820_64892040_64892657
ENSMUST00000071898.7	chr15	-	4518	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_25	49.8187687746518	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGTGTGGTCATTGTGT	NA	False	NA	-2	True	TATAAA	-27	NA	76491791	76480005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ENSMUST00000071921.13	chr5	-	3806	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	37.7529760049699	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGAATTCCTTGCT	NA	False	NA	66	True	NA	NA	NA	9211776	9168800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ENSMUST00000071926.5	chr13	+	1800	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGACATGTAATACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	43551865	43556337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUST00000071926.5-0	chr13	+	933	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	0	867	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	87.1250567299906	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCACATTTCTTTTCT	NA	False	NA	31	True	TATAAA	-31	NA	43551865	43555470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUST00000071937.7	chr7	-	2681	3	FSM	ENSMUSG00000058743.7	ENSMUST00000071937.7	2681	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTTCTGTAGTAAGAT	861	False	NA	NA	False	TATAAA	-20	NA	45474206	45465883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45467637_45468795_45469558_45474040
ENSMUST00000071944.13	chr5	-	2659	19	FSM	ENSMUSG00000029217.17	ENSMUST00000071944.13	2659	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	3.16471674858358	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTGTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	73025787	72913058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_72913723_72914705_72914864_72914946_72915066_72917685_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72936763_72936830_72939345_72939519_72941060_72941102_72943259_72943389_72944080_72944163_72946482_72946588_72980798_72980985_72982386_72982474_73025736
ENSMUST00000071949.5	chr5	-	1273	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTCCTTCTGGAGAT	NA	False	NA	-4	True	ATTAAA	-19	NA	36905994	36904721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36904700_36906000
ENSMUST00000071951.14	chr17	+	1497	7	FSM	ENSMUSG00000060550.17	ENSMUST00000071951.14	1497	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.74535599249993	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATAAATGGCA	8298	False	NA	NA	False	NA	NA	NA	35658130	35662710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35658261_35658427_35658698_35658884_35659161_35661242_35661528_35661653_35661771_35661942_35661976_35662324
ENSMUST00000071968.9	chr5	-	3228	16	FSM	ENSMUSG00000014158.13	ENSMUST00000071968.9	3228	16	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_12	3.23865541373096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAGGGTGAGGTTGGAA	NA	False	NA	NA	False	AATAAA	-20	NA	114796482	114760212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782992_114796402
ENSMUST00000071973.8	chr13	+	4239	16	FSM	ENSMUSG00000057069.8	ENSMUST00000071973.8	4239	16	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_15	21.5185707910374	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTTTCTTTGTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	12580763	12624417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12608388_12608401_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ENSMUST00000071985.6	chr1	-	4908	13	FSM	ENSMUSG00000040693.8	ENSMUST00000071985.6	4908	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	6.53781733880318	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTTATTACTCTTTA	NA	False	NA	NA	False	ATTAAA	-18	NA	96799896	96743994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_96746833_96748907_96749046_96751421_96751487_96756515_96756701_96759710_96759865_96764604_96764801_96765178_96765324_96766891_96767011_96768854_96768977_96770178_96770276_96772200_96772381_96795449_96795714_96799491
ENSMUST00000071986.13	chr7	-	566	4	FSM	ENSMUSG00000089661.10	ENSMUST00000071986.13	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	9.2736184954957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTCTTTGGTTTTTG	NA	False	NA	0	True	AATACA	-18	NA	26880574	26879166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26879260_26879593_26879705_26880124_26880259_26880346
ENSMUST00000071986.13-0	chr7	-	501	4	FSM	ENSMUSG00000089661.10	ENSMUST00000071986.13	566	4	63	2	41	0	multi-exon	FALSE	canonical	3	138	junction_1	9.2736184954957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGTCTCTTTGGTTTT	NA	False	NA	-2	True	AATACA	-16	NA	26880511	26879168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26879260_26879593_26879705_26880124_26880259_26880346
ENSMUST00000071991.6	chr9	-	619	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	178157	junction_1	1580.5	31066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275459	78274333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_78274577_78275002_78275186_78275266
ENSMUST00000072014.6	chr12	-	901	1	FSM	ENSMUSG00000071362.4	ENSMUST00000072014.6	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTCACACTCCAGGACA	NA	False	NA	NA	False	NA	NA	NA	23830179	23829278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_23829300_23830200
ENSMUST00000072020.9	chr10	-	2015	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	15.2183321404185	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81436734	81426738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ENSMUST00000072040.7	chr12	+	1509	13	FSM	ENSMUSG00000021115.16	ENSMUST00000072040.7	1509	13	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_12	159.966901958568	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	False	NA	NA	False	ATTAAA	-42	NA	105976486	106041479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUST00000072055.13	chr19	+	2549	11	FSM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	49.9220392211696	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5744	False	NA	6	True	AATAAA	-17	NA	3901796	3944369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ENSMUST00000072080.10	chr3	+	4142	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	0	0	0	0	multi-exon	TRUE	canonical	3	641	junction_2	81.4479926714224	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTGTAGTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-24	NA	157742298	157774124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUST00000072080.10-0	chr3	+	2704	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	40	1398	0	0	multi-exon	FALSE	canonical	3	641	junction_2	81.4479926714224	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUST00000072111.8	chr2	+	2277	6	FSM	ENSMUSG00000026811.19	ENSMUST00000072111.8	2277	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	27.8251684631019	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	4414	False	NA	5	True	AATAAA	-14	NA	32498082	32510816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUST00000072113.6	chr15	-	3747	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_6	14.2087609906314	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGGCTTCTGTATCTGCCC	NA	False	NA	87	True	AATAAA	-17	NA	58695379	58654117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ENSMUST00000072119.15	chr13	-	2489	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_6	457.563588477055	2432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGGTCGGCCAACTCCC	NA	False	NA	76	True	AATAAA	-19	NA	100923078	100915157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUST00000072141.4	chr19	+	6761	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_7	35.2497097976186	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTTCTCTTTAAGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	47079206	47120304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ENSMUST00000072154.9	chr12	-	2339	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	16.0485374896143	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGACTTGTTTTTTTAT	NA	False	NA	-1	True	AATAAA	-30	NA	79136425	79127437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
ENSMUST00000072155.5	chr7	-	1133	9	FSM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	426	977	0	0	multi-exon	FALSE	canonical	3	15	junction_4	3.80788655293195	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACGAGCACCTTCTGGG	8712	False	NA	-4	True	AATAAA	-30	NA	127187341	127182531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184434_127184625_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
ENSMUST00000072186.12	chr2	-	3144	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTTCTTGTGGCCT	NA	False	NA	-4	True	AATAAA	-14	NA	37593287	37473167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ENSMUST00000072186.12-0	chr2	-	2715	18	FSM	ENSMUSG00000026915.17	ENSMUST00000072186.12	3144	18	-73	502	0	-502	multi-exon	FALSE	canonical	3	591	junction_8	55.9640270025228	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGTACTGCCTGGTTC	NA	False	NA	-5	True	AATAAA	-15	NA	37593360	37473669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593203
ENSMUST00000072206.14	chr9	+	2337	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGCTTTGCCTGATCTT	9557	False	NA	22	True	AGTAAA	-16	NA	106158259	106227720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUST00000072206.14-0	chr9	+	1374	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	319	644	0	0	multi-exon	FALSE	canonical	3	282	junction_9	19.0265603827912	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCCACATCTTACCCAG	9876	False	NA	7	True	AATAAA	-19	NA	106158578	106227076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUST00000072232.9	chr9	-	3667	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCTGTATGCCACATTA	NA	False	NA	71	True	AATAAA	-30	NA	75466939	75404988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ENSMUST00000072232.9-0	chr9	-	3258	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	0	409	0	-409	multi-exon	FALSE	canonical	3	422	junction_2	36.4461381720248	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75466939	75405397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ENSMUST00000072239.14	chr10	-	3533	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_4	77.1961786619001	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007444	90983432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUST00000072249.13	chr9	-	3787	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	33.7740654941036	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATGGTGGAATGTGAT	NA	False	NA	-12	True	AATAAA	-10	NA	103242737	103230306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ENSMUST00000072287.12	chr3	+	3692	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	4.61410879802373	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCAGTTTTAATGGTCT	NA	False	NA	NA	False	ATTAAA	-3	NA	94882041	94914154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUST00000072289.12	chr11	+	2621	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_3	23.4778619128744	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928756	77951260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUST00000072292.12	chrX	-	4045	20	FSM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_17	15.8598431908636	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCATCATCTAATACG	NA	False	NA	44	True	AATAAA	-22	NA	47683329	47630501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
ENSMUST00000072298.13	chr2	-	2586	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.2644786258439	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5914	False	NA	0	True	AATAAA	-22	NA	156833976	156769264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUST00000072311.13	chr5	+	4586	12	FSM	ENSMUSG00000014932.16	ENSMUST00000072311.13	4586	12	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	199.348401357942	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768527	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ENSMUST00000072312.12	chr3	+	4743	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	25	2812	0	1965	multi-exon	FALSE	canonical	3	18	junction_4	5.5578772926361	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGTTGTAAAATC	NA	False	NA	11	True	AATAAA	-20	NA	32871719	32989408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ENSMUST00000072324.12	chr6	-	2952	18	FSM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	17.2566621205624	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797648	148743990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ENSMUST00000072329.15	chr13	-	1362	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	46.8187996428785	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGCAGCTGGTGAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	45155623	45075554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ENSMUST00000072334.12	chr2	+	4257	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	66	2255	0	629	multi-exon	FALSE	canonical	3	111	junction_4	50.7413785780402	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAACAGCTGTGGTTTCT	7071	False	NA	8	True	AATAAA	-9	NA	181162343	181194671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ENSMUST00000072357.14	chr10	-	3639	20	FSM	ENSMUSG00000037012.19	ENSMUST00000072357.14	3639	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	191.958617423975	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCGGAGTGGTGTTTC	64	False	NA	-7	True	AGTAAA	-15	NA	62194141	62104886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62127753_62127823_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62188836_62188885_62194114
ENSMUST00000072359.8	chr14	+	2147	1	FSM	ENSMUSG00000058126.8	ENSMUST00000072359.8	2147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTGCAGACTCAGT	NA	False	NA	NA	False	NA	NA	NA	113552039	113554186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_113552000_113554200
ENSMUST00000072362.14	chr9	+	3502	21	FSM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	0	0	0	0	multi-exon	FALSE	canonical	2	327	junction_20	112.703715555433	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5879	False	NA	20	True	AATAAA	-30	NA	21336240	21418436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUST00000072376.13	chr18	+	3040	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	53.7248487666555	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	926	False	NA	23	True	AATAAA	-28	NA	38429687	38450902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUST00000072383.14	chr17	+	2905	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	3	True	NA	NA	NA	66418539	66427498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUST00000072383.14-1	chr17	+	1841	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	8	1056	0	0	multi-exon	FALSE	canonical	3	38	junction_1	29.1082462542833	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66418547	66426442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUST00000072406.5	chr17	-	3255	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAATTTTCTTCGTGTCT	NA	False	NA	-18	True	TATAAA	-38	NA	85397649	85370897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUST00000072406.5-0	chr17	-	2216	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	-20	1059	0	0	multi-exon	FALSE	canonical	3	23	junction_13	48.4489605166915	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397669	85371956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUST00000072427.7	chr8	-	5667	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	-17	2018	0	-2018	multi-exon	FALSE	canonical	3	36	junction_3	3.85861230093008	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGCTTACCTCATCATTT	NA	False	NA	NA	False	AATGAA	-23	NA	69848191	69821179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
ENSMUST00000072431.13	chr4	-	4059	9	FSM	ENSMUSG00000040928.16	ENSMUST00000072431.13	4059	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	67.6456761367643	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1151	False	NA	-5	True	AATAAA	-15	NA	129083372	129041797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393_129077511_129083334
ENSMUST00000072451.11	chrX	-	2512	17	FSM	ENSMUSG00000037341.15	ENSMUST00000072451.11	2512	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	2.05775970414429	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCACTTTTTCACATAG	NA	False	NA	NA	False	ATTAAA	-16	NA	20158046	19971993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_19972454_19974913_19975020_19986758_19986842_19998009_19998074_20005151_20005212_20025053_20025208_20025870_20025983_20028166_20028281_20028382_20028472_20028672_20028779_20031168_20031311_20032246_20032353_20052298_20052412_20055082_20055160_20068948_20069027_20071604_20071805_20157598
ENSMUST00000072452.11	chr2	+	1606	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	36.2613966759264	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTGGCTTGTACTTA	NA	False	NA	NA	False	CATAAA	-14	NA	164302890	164307428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
ENSMUST00000072503.13	chr7	+	679	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	0	0	0	0	multi-exon	FALSE	canonical	3	6098	junction_1	973.20817916826	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTGTTCATTCATGAA	5922	False	NA	16	True	AATAAA	-23	NA	45367494	45370259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUST00000072519.7	chr13	+	3662	22	FSM	ENSMUSG00000041112.18	ENSMUST00000072519.7	5464	22	-23	1825	0	-1825	multi-exon	FALSE	canonical	2	20	junction_15	9.13863990039136	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGGTGTTTTGATT	NA	False	NA	8	True	AATAAA	-18	NA	20274765	20790698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ENSMUST00000072530.11	chr14	+	2601	15	FSM	ENSMUSG00000022214.16	ENSMUST00000072530.11	2601	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.3960278912243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCTGTGTCTGTGTCAC	NA	False	NA	11	True	AATAAA	-16	NA	55798385	55807519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55798433_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000072554.13	chr4	+	2528	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	55.1321644374276	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8255	False	NA	22	True	NA	NA	NA	156194438	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ENSMUST00000072566.5	chr11	-	734	4	FSM	ENSMUSG00000020857.12	ENSMUST00000072566.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	6715	junction_3	620.302256072706	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGCAGTGTTCAGTAC	NA	False	NA	-31	True	NA	NA	NA	93846609	93840642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320
ENSMUST00000072576.10	chr18	+	876	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_3	511.998291012773	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGTAGCTTTCACTTAG	NA	False	NA	4	True	AATAAA	-14	NA	34464197	34469652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
ENSMUST00000072587.5	chr3	-	405	2	FSM	ENSMUSG00000054312.7	ENSMUST00000072587.5	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_1	0	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAGGCTTGGACATA	NA	False	NA	NA	False	AATAAA	-17	NA	95777931	95769965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95770245_95777805
ENSMUST00000072602.14	chr5	+	2790	8	FSM	ENSMUSG00000064267.14	ENSMUST00000072602.14	2790	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	20.2887321698825	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGGCTCCTTTTTGTT	NA	False	NA	28	True	AATAAA	-39	NA	122347791	122380360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122347985_122348404_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ENSMUST00000072607.9	chr5	-	7102	47	FSM	ENSMUSG00000029547.11	ENSMUST00000072607.9	7102	47	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	49.3038493955329	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	False	NA	-9	True	AATGAA	-19	NA	139761428	139737036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ENSMUST00000072621.12	chr11	-	3324	14	FSM	ENSMUSG00000038909.17	ENSMUST00000072621.12	3324	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	277.302283100983	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95200428	95165084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200362
ENSMUST00000072634.15	chr9	-	3634	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_10	199.562020434751	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8739	False	NA	-9	True	AATAAA	-19	NA	31123087	31060852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUST00000072662.12	chr7	+	1980	6	FSM	ENSMUSG00000058028.15	ENSMUST00000072662.12	1980	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.49799919935936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTGATTGACTTATT	3080	False	NA	NA	False	ATTAAA	-22	NA	6225276	6242422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6225336_6227584_6227759_6233070_6233538_6234335_6234537_6236813_6236968_6241497
ENSMUST00000072695.13	chr4	-	3644	20	FSM	ENSMUSG00000008305.19	ENSMUST00000072695.13	3644	20	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	62.2917361117158	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119094	72036041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUST00000072697.13	chr3	-	2047	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_11	59.2580851965116	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	NA	False	NA	-6	True	AATAAA	-16	NA	153650269	153627993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ENSMUST00000072699.13	chrX	+	1571	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599523	70604282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000072699.13-0	chrX	+	1499	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	72	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	126.240593708997	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599595	70604282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000072727.7	chr7	-	2285	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_2	192.287354411741	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGGTTTTTTTGTTGTTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143102829	143067315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUST00000072735.9	chr17	-	913	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	403	5	0	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7185796180472	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8370	False	NA	-7	True	AATAAA	-17	NA	26011369	26009479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
ENSMUST00000072740.13	chr11	-	5394	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_22	28.8783427101686	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	6119	False	NA	-1	True	AATAAA	-36	NA	76462361	76307559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ENSMUST00000072744.15	chr12	-	2524	20	FSM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	8.24352343784865	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTCCCCATCTGGTTA	NA	False	NA	-10	True	AATAAA	-21	NA	87313030	87285646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ENSMUST00000072750.13	chr5	-	1537	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	0	0	0	0	multi-exon	FALSE	canonical	3	1409	junction_2	1330.01989333493	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126794	100108860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ENSMUST00000072751.13	chr10	+	1444	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_3	32.2286751201473	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	15	True	AATAAA	-19	NA	81220261	81224186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ENSMUST00000072753.13	chr4	+	1924	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAACCCCACAAGCC	NA	False	NA	NA	False	NA	NA	NA	106768729	106905764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUST00000072753.13-0	chr4	+	3114	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	-63	-1127	0	0	multi-exon	FALSE	canonical	3	47	junction_5	51.1955503437555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTCCTGACATACTTGT	NA	False	NA	16	True	ATTAAA	-20	NA	106768666	106906891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUST00000072777.14	chr10	-	3710	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	7.32717544487642	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGTGTGTGTGTTCAG	NA	False	NA	-13	True	AATAAA	-20	NA	120312374	120197179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
ENSMUST00000072829.4	chr7	+	1368	3	FSM	ENSMUSG00000064194.11	ENSMUST00000072829.4	1368	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_2	46.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAACCAATGTGATGA	NA	False	NA	NA	False	NA	NA	NA	42836593	42839905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_42836721_42836916_42836978_42838725
ENSMUST00000072835.7	chr18	-	2801	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGTTGTACGTTGTCTA	2713	False	NA	5	True	NA	NA	NA	46444995	46415217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ENSMUST00000072835.7-1	chr18	-	2301	10	FSM	ENSMUSG00000071855.6	ENSMUST00000072835.7	2801	10	37	463	0	-463	multi-exon	FALSE	canonical	3	48	junction_3	12.4909844030815	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTGGCACCATTTTCT	2750	False	NA	-1	True	TATAAA	-22	NA	46444958	46415680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46416354_46416743_46416863_46418679_46418776_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
ENSMUST00000072836.7	chr7	-	2968	6	FSM	ENSMUSG00000057342.16	ENSMUST00000072836.7	2968	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	32.4678302324008	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	5957	False	NA	-24	True	AATAAA	-17	NA	45364631	45359708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45364020
ENSMUST00000072837.7	chr5	+	7439	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACCCAAGGGTATGAGTG	NA	False	NA	12	True	AATAAA	-19	NA	142387254	142447766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
ENSMUST00000072837.7-0	chr5	+	2390	9	FSM	ENSMUSG00000056493.10	ENSMUST00000072837.7	7439	9	0	5049	0	-5049	multi-exon	FALSE	canonical	3	17	junction_3	5.8309518948453	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCTGGGGGTTCTGTGT	NA	False	NA	NA	False	CATAAA	-24	NA	142387254	142442717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142387797_142420895_142421082_142434441_142434599_142435995_142436143_142437193_142437388_142439263_142439431_142439514_142439800_142441107_142441333_142442230
ENSMUST00000072838.6	chr15	+	2018	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	77.0148638653497	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7144	False	NA	12	True	NA	NA	NA	76361644	76385172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ENSMUST00000072841.12	chr11	+	1454	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	14.3486688414174	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTGTGTTCCTTAGGA	7113	False	NA	13	True	AATAAA	-16	NA	70548027	70553339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUST00000072847.12	chr18	+	2314	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	0	688	0	0	multi-exon	FALSE	canonical	3	116	junction_1	148.868416917611	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	21134397	21160592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ENSMUST00000072857.13	chr5	-	2406	9	FSM	ENSMUSG00000062110.15	ENSMUST00000072857.13	3672	9	-10	1276	0	0	multi-exon	FALSE	canonical	3	48	junction_1	6.19979838381862	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGTCAAGCTGTCGCT	NA	False	NA	-6	True	AATAAA	-22	NA	74692420	74366752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_74367057_74372911_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
ENSMUST00000072866.12	chr4	+	2645	7	FSM	ENSMUSG00000028437.15	ENSMUST00000072866.12	3456	7	52	759	0	0	multi-exon	FALSE	canonical	3	286	junction_5	24.6981780704569	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGCTGCCTTAACCTC	1	True	NA	5	True	AATAAA	-14	NA	41349047	41389766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ENSMUST00000072868.5	chr15	+	5456	2	FSM	ENSMUSG00000050963.8	ENSMUST00000072868.5	5456	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGGTCCCTCAATTACA	81	False	NA	NA	False	ATTAAA	-23	NA	34837500	34843553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_34837999_34838595
ENSMUST00000072873.14	chr11	+	4610	32	FSM	ENSMUSG00000020827.19	ENSMUST00000072873.14	4610	32	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_20	18.9436427990342	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTCACTGGGCCCTGGG	1475	False	NA	NA	False	NA	NA	NA	70453715	70504954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ENSMUST00000072875.15	chr3	-	2654	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_1	36.7913482463625	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157737403	157716555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ENSMUST00000072889.12	chr13	-	4988	38	FSM	ENSMUSG00000021338.18	ENSMUST00000072889.12	4988	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	44.9615695001977	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCTGCTTATTAGTT	NA	False	NA	NA	False	TATAAA	-26	NA	24464778	24196641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24286054_24286067_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ENSMUST00000072895.10	chr2	-	3488	4	FSM	ENSMUSG00000078905.9	ENSMUST00000072895.10	625	4	-18	-2845	0	2845	multi-exon	FALSE	canonical	3	40	junction_2	18.263503375737	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	174909574	174900496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174903715_174905392_174905454_174905660_174905788_174909492
ENSMUST00000072896.13	chr5	+	2221	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	40.0679422980517	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCAATTTGTTTTAT	NA	False	NA	6	True	AGTAAA	-26	NA	21850876	21867692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ENSMUST00000072899.9	chr9	-	6754	19	FSM	ENSMUSG00000032232.15	ENSMUST00000072899.9	6754	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	5.66666666666667	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGGCTCTTGTATTAT	NA	False	NA	NA	False	AATAAA	-16	NA	71678884	71533790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_71536675_71537757_71537922_71538143_71538253_71539012_71539138_71539879_71539964_71548640_71548731_71552773_71552936_71557503_71557675_71558515_71558669_71562574_71562680_71563327_71563535_71612429_71612643_71622604_71622741_71623689_71623839_71624677_71624780_71628877_71628984_71630815_71630911_71631759_71633365_71678790
ENSMUST00000072916.5	chr11	-	732	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	0	0	0	0	multi-exon	TRUE	canonical	3	218	junction_4	57.8986182909402	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	-15	True	AATAAA	-25	NA	62172201	62158049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
ENSMUST00000072933.13	chr6	-	1272	12	FSM	ENSMUSG00000059900.15	ENSMUST00000072933.13	1272	12	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_11	22.1650458199018	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGTCGACTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	115735960	115706101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115713343_115713398_115715908_115715984_115718501_115718634_115719270_115719349_115735898
ENSMUST00000072948.11	chr11	-	3743	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	29.8427833148373	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	NA	False	NA	1	True	AATAAA	-15	NA	116089627	116062713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
ENSMUST00000072961.6	chr13	+	3199	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	0	0	0	0	multi-exon	TRUE	canonical	3	419	junction_25	60.5186237990473	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	18901459	19050981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUST00000072997.10	chr2	+	4208	23	FSM	ENSMUSG00000027478.16	ENSMUST00000072997.10	4208	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	25.158013034314	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491369	153529650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ENSMUST00000073054.5	chr18	-	2494	11	FSM	ENSMUSG00000062526.5	ENSMUST00000073054.5	2494	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	12.1016527796826	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGGATCTTTTCTAA	NA	False	NA	1	True	GATAAA	-23	NA	67378901	67358113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
ENSMUST00000073067.11	chrX	-	1910	2	FSM	ENSMUSG00000032806.14	ENSMUST00000073067.11	1910	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	73416911	73412822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73414618_73416796
ENSMUST00000073076.12	chr5	+	2939	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	17.0567679626984	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCTGTAGCTTAG	NA	False	NA	29	True	AATAAA	-19	NA	24599152	24614943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUST00000073080.7	chr19	+	946	1	FSM	ENSMUSG00000058927.7	ENSMUST00000073080.7	946	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGTTGATCTGCAAA	NA	False	NA	NA	False	AATAAA	-16	NA	24853049	24853995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_24853000_24854000
ENSMUST00000073089.13	chr3	-	4965	16	FSM	ENSMUSG00000054942.14	ENSMUST00000073089.13	4965	16	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_7	24.7194030852059	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTTCTTAATGACT	NA	False	NA	-34	True	AATAAA	-13	NA	152046044	151979485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ENSMUST00000073104.11	chr17	+	3850	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	67.7698974676079	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGAGAAAGGCGTTTGT	NA	False	NA	35	True	AATAAA	-32	NA	66090349	66148921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUST00000073109.12	chr9	+	4589	8	FSM	ENSMUSG00000047409.14	ENSMUST00000073109.12	4589	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.56284683238284	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGTGCCGTCCCAGTG	NA	False	NA	NA	False	NA	NA	NA	118755520	118873066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_118756009_118840302_118840458_118849079_118849113_118856004_118856107_118859263_118859321_118862603_118862697_118866428_118866615_118869591
ENSMUST00000073116.13	chr19	+	2979	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	7.7085334275273	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAACCCCAATGTGCTG	NA	False	NA	23	True	AATAAA	-28	NA	46293182	46300461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ENSMUST00000073120.11	chr1	-	1821	13	FSM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	32.2076595444831	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5189	False	NA	-15	True	AGTAAA	-16	NA	171108760	171104564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ENSMUST00000073124.9	chr6	-	3651	7	FSM	ENSMUSG00000057691.9	ENSMUST00000073124.9	3651	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	32.8988348324577	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1050	False	NA	2	True	AATAAA	-17	NA	48063527	48039328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ENSMUST00000073128.7	chr11	+	2977	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	22.1716786313832	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTTACTGTCTGTTAA	469	False	NA	16	True	AATAAA	-17	NA	58221575	58238551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUST00000073149.7	chr8	+	3499	16	FSM	ENSMUSG00000014786.9	ENSMUST00000073149.7	3499	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	2.98589275687449	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGACTTAGTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	106075474	106095375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083602_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ENSMUST00000073150.6	chr14	+	5900	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTGGTGCTTTTTTTT	NA	False	NA	11	True	ATTAAA	-24	NA	48358279	48498345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ENSMUST00000073150.6-0	chr14	+	1836	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	0	4064	0	0	multi-exon	FALSE	canonical	3	56	junction_4	6.58483105326173	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATCTCAACTGCCATGC	NA	False	NA	NA	False	ATTAAA	-21	NA	48358279	48494281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ENSMUST00000073152.13	chr2	-	2865	14	FSM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	59.5439273976854	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATGGCCCACCATATA	7965	False	NA	NA	False	NA	NA	NA	69542950	69517158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ENSMUST00000073157.15	chr13	-	3957	4	FSM	ENSMUSG00000071281.13	ENSMUST00000073157.15	3957	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	15.2970585407784	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67877292	67853427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67877179
ENSMUST00000073161.12	chr5	-	3572	31	FSM	ENSMUSG00000023079.15	ENSMUST00000073161.12	3572	31	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	54.133743840808	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCGTCACTTTTTTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	134485542	134386514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUST00000073192.14	chr11	-	2532	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	0	0	0	0	multi-exon	TRUE	canonical	2	57	junction_8	15.3746121325012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTTCATGCTTTTGTTC	NA	False	NA	NA	False	AATAAA	-12	NA	30904152	30880773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ENSMUST00000073192.14-0	chr11	-	1885	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	-183	830	0	147	multi-exon	FALSE	canonical	2	57	junction_8	15.3746121325012	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTGTCTCACTTCATT	NA	False	NA	-17	True	GATAAA	-12	NA	30904335	30881603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ENSMUST00000073201.6	chr8	+	1401	3	FSM	ENSMUSG00000058748.10	ENSMUST00000073201.6	1401	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	6.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGCAATGTGGTAAATC	NA	False	NA	NA	False	NA	NA	NA	4675839	4679380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_4675967_4676163_4676225_4678167
ENSMUST00000073228.12	chr2	+	2669	5	FSM	ENSMUSG00000027463.15	ENSMUST00000073228.12	2669	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.8294180358703	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTTGTGTGCTCAC	NA	False	NA	18	True	NA	NA	NA	151838454	151851178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151838572_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ENSMUST00000073234.9	chr11	-	3688	13	FSM	ENSMUSG00000059995.13	ENSMUST00000073234.9	3688	13	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_12	22.3811676788023	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102187457	102180125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184148_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ENSMUST00000073238.7	chr14	+	384	1	FSM	ENSMUSG00000060143.8	ENSMUST00000073238.7	384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	105919261	105919645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_105919300_105919600
ENSMUST00000073252.9	chr1	+	2925	12	FSM	ENSMUSG00000026251.14	ENSMUST00000073252.9	2925	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.67628081041689	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCTTGTGGTAATTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	87118358	87127792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87118465_87118696_87118852_87119241_87119287_87119935_87120046_87120207_87120364_87120567_87120678_87122521_87122723_87123206_87123319_87123404_87123520_87125004_87125210_87125296_87125416_87126301
ENSMUST00000073261.3	chr13	+	399	1	FSM	ENSMUSG00000061991.3	ENSMUST00000073261.3	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGAGCTAAGTTTTTTT	7417	False	NA	NA	False	NA	NA	NA	23718075	23718474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_23718100_23718500
ENSMUST00000073308.11	chr11	-	2269	15	FSM	ENSMUSG00000009079.17	ENSMUST00000073308.11	2269	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	1383.04088950429	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCATCCTCCTCC	NA	False	NA	-22	True	AATAAA	-14	NA	5049067	5019697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028580_5032283_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUST00000073312.7	chr17	+	4209	6	FSM	ENSMUSG00000067928.7	ENSMUST00000073312.7	4209	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	11.689311356962	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGGAAATTCAATGAG	NA	False	NA	9	True	AATAAA	-24	NA	21926722	21944617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21926876_21927591_21927704_21928185_21928278_21938027_21938104_21939924_21940052_21940968
ENSMUST00000073316.13	chr6	+	4652	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	39.2423136890967	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCAAGGGCTGGCAGTA	NA	False	NA	NA	False	NA	NA	NA	128339929	128353109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
ENSMUST00000073339.7	chrX	+	1857	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	42	576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGAGGCTTTCATTTT	1668	False	NA	NA	False	AATAAA	-15	NA	35861858	35869732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_35862268_35865773_35865930_35868440
ENSMUST00000073352.10	chr2	+	2690	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	80.1373820385967	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682019	156697490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
ENSMUST00000073364.6	chrX	+	5463	16	FSM	ENSMUSG00000025262.9	ENSMUST00000073364.6	5463	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	3.8262252939418	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAATAAGAAGAAAAAAGT	NA	False	NA	NA	False	AATAAA	-34	NA	150127170	150254838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150211912_150212013_150212832_150212910_150213386_150213665_150214465_150214740_150215597_150215770_150219140_150219391_150240717_150240833_150246964_150247175_150248278_150248481_150250295_150250435_150250794_150250853_150252471
ENSMUST00000073387.5	chr6	-	3273	18	FSM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.13454714835211	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTTCCCTTGATGTT	8190	False	NA	NA	False	AATAAA	-15	NA	42350202	42335420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709_42343113_42344519_42344802_42349108_42349177_42350059
ENSMUST00000073388.13	chr11	+	2327	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	8.17312669668102	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	15	True	NA	NA	NA	117716749	117730734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
ENSMUST00000073392.11	chrX	-	2926	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	17.609368067878	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCTTGGAAGTATTT	NA	False	NA	0	True	AATAAA	-32	NA	10083159	10024454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ENSMUST00000073410.12	chr7	-	1430	4	FSM	ENSMUSG00000090744.8	ENSMUST00000073410.12	1430	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	48.9285192909003	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATCACTGTGGTGAAG	NA	False	NA	NA	False	NA	NA	NA	41210253	41195097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41210137
ENSMUST00000073430.14	chr19	+	2112	10	FSM	ENSMUSG00000010110.18	ENSMUST00000073430.14	2112	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	5.51764845241562	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6939	False	NA	12	True	NA	NA	NA	8719166	8733006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUST00000073441.13	chr1	-	5767	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	55.4427244244903	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778373	152712745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ENSMUST00000073448.12	chr9	-	2987	19	FSM	ENSMUSG00000057969.16	ENSMUST00000073448.12	2987	19	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_18	15.19584088647	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAATGGCCCCAGCA	6904	False	NA	-23	True	AATAAA	-15	NA	107483855	107475552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483754
ENSMUST00000073456.9	chr13	-	2700	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTGGTCTAACAGT	NA	False	NA	NA	False	AATAAA	-14	NA	97274445	97265931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUST00000073456.9-0	chr13	-	1055	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	85	1560	0	0	multi-exon	FALSE	canonical	3	555	junction_1	171.768914533451	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGGCATAACGGTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	97274360	97267491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUST00000073459.12	chr7	+	3817	7	FSM	ENSMUSG00000062542.12	ENSMUST00000073459.12	3817	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	10.4628974104797	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGTTGTCTCATTAAAT	NA	False	NA	NA	False	AGTAAA	-19	NA	106969996	107147863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
ENSMUST00000073466.13	chr16	-	1965	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	0	0	0	0	multi-exon	FALSE	canonical	1	405	junction_2	358.43629334777	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCTGAATTTCTCCGA	8828	False	NA	NA	False	TTTAAA	-18	NA	91525863	91486209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000073471.13	chr11	+	526	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	13360	junction_1	1585.12172683642	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTGTGTGGTGTT	NA	False	NA	33	True	ATTAAA	-14	NA	68792408	68795360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
ENSMUST00000073534.10	chr17	+	2864	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	10.6092512939298	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGCTCCTCCATCATTT	NA	False	NA	4	True	AATAAA	-16	NA	28396102	28424860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ENSMUST00000073551.6	chr12	+	1958	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	2	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGTGTAATGTCCT	NA	False	NA	17	True	NA	NA	NA	116011343	116024212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_116011487_116018341_116018469_116022524
ENSMUST00000073570.12	chr17	+	1197	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	31.6569107779012	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGAGTGCTCTTCTCCG	4917	False	NA	92	True	NA	NA	NA	33848063	33850753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUST00000073572.12	chr3	-	1091	8	FSM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	423	8	0	0	multi-exon	FALSE	canonical	3	739	junction_1	39.053077434984	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGATCAAAGAATCCC	NA	False	NA	-24	True	AATAAA	-13	NA	89121219	89116395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ENSMUST00000073575.12	chr2	-	2469	10	FSM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	9.55684745788763	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4167	False	NA	0	True	AATAAA	-15	NA	90900762	90892135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
ENSMUST00000073605.15	chr6	-	1272	7	FSM	ENSMUSG00000057666.19	ENSMUST00000073605.15	1272	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4049.97499649346	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125143430	125138816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125143356
ENSMUST00000073660.7	chr11	+	2568	11	FSM	ENSMUSG00000061981.15	ENSMUST00000073660.7	2568	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	151.687969199934	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCATCGTATATTCTGT	NA	False	NA	21	True	AATAAA	-18	NA	77928809	77951260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUST00000073691.5	chr15	-	4243	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_4	128.449367456597	2246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7238	False	NA	-3	True	AATAAA	-15	NA	99773337	99676350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ENSMUST00000073705.12	chr11	+	3258	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	31	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAATGCCTGCGTGTGT	2598	False	NA	2	True	TTTAAA	-17	NA	77985485	78047526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77985618_78033918_78034041_78044522
ENSMUST00000073722.7	chr8	-	342	1	FSM	ENSMUSG00000060019.7	ENSMUST00000073722.7	342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGCTTTTGTTAAGTT	NA	False	NA	NA	False	NA	NA	NA	107299982	107299640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107299600_107300000
ENSMUST00000073781.12	chr10	+	5473	13	FSM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_6	6.98808509774554	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACTTGTAAAACATTTT	NA	False	NA	33	True	AATAAA	-26	NA	110581328	110623245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ENSMUST00000073782.4	chr2	+	2797	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.35412613473634	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	150059992	150082645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
ENSMUST00000073783.6	chr10	-	852	4	FSM	ENSMUSG00000060002.15	ENSMUST00000073783.6	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	64.2201076160903	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTCTTCCATATCTT	4169	False	NA	NA	False	NA	NA	NA	88339787	88322903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88323125_88324243_88324386_88325442_88325591_88339446
ENSMUST00000073787.7	chr4	+	1288	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	35.9787746070127	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCGTCTCCTCTGCTGCCC	NA	False	NA	29	True	AATAAA	-40	NA	139038054	139045737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
ENSMUST00000073837.13	chr15	-	4953	11	FSM	ENSMUSG00000009739.18	ENSMUST00000073837.13	4953	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	17.6751237619429	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTGCCTATTTTGTTG	NA	False	NA	0	True	AATAAA	-21	NA	100497865	100473198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483755_100484010_100484524_100484654_100485669_100485787_100489721_100489915_100491853_100491947_100497643
ENSMUST00000073840.12	chr16	+	5394	32	FSM	ENSMUSG00000045983.17	ENSMUST00000073840.12	5394	32	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	320.871770382026	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20491498	20511631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUST00000073868.9	chr10	+	885	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	0	0	0	0	multi-exon	FALSE	canonical	3	9741	junction_1	845.476607528293	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCAGGTGCTAGATCTT	4912	False	NA	0	True	AATAAA	-24	NA	127871443	127884502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUST00000073889.14	chr7	-	7837	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTTTGATCATGGTG	NA	False	NA	2	True	NA	NA	NA	79116110	79095978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ENSMUST00000073889.14-0	chr7	-	4522	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	164	3151	0	0	multi-exon	FALSE	canonical	3	224	junction_20	45.8324292422727	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115946	79099129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ENSMUST00000073899.6	chr19	+	1605	9	FSM	ENSMUSG00000024743.17	ENSMUST00000073899.6	1605	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	10.6418983268964	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGCCAAGGGAGGCTCC	NA	False	NA	NA	False	NA	NA	NA	10366453	10425808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ENSMUST00000073924.10	chr11	+	3866	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	8.74642784226795	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTGTTAAAAGTGCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	58758041	58774114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
ENSMUST00000073926.8	chr10	-	490	7	FSM	ENSMUSG00000061983.8	ENSMUST00000073926.8	490	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1773.5106192709	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGATTTTTCTCTTG	NA	False	NA	-25	True	AATAAA	-6	NA	23663086	23661102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522_23662538_23662661_23662779_23662891_23662943_23663053
ENSMUST00000073927.5	chrX	-	2232	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_11	82.5987012884915	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	False	NA	NA	False	ATTAAA	-11	NA	100128978	100122827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ENSMUST00000073945.6	chr5	+	650	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	420.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCGAGCCAATCAAAGACA	NA	False	NA	NA	False	AAAAAG	-5	NA	129970967	130011420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129971069_130007359_130007470_130010981
ENSMUST00000073945.6-1	chr5	+	4834	3	FSM	ENSMUSG00000066735.9	ENSMUST00000073945.6	650	3	-71	-4113	-53	0	multi-exon	FALSE	canonical	3	55	junction_1	420.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970896	130015533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129971069_130007359_130007470_130010981
ENSMUST00000073957.8	chr5	+	4486	17	FSM	ENSMUSG00000063531.8	ENSMUST00000073957.8	6861	17	0	2375	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.82752393965168	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTCCACACGTTATTG	NA	False	NA	NA	False	AATAAA	-19	NA	14075289	14304328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_14076039_14193887_14194049_14212201_14212262_14214072_14214193_14260304_14260399_14274300_14274421_14275566_14275710_14276429_14276545_14276648_14276719_14280120_14280266_14282008_14282232_14283638_14283731_14286055_14286098_14286280_14286448_14290583_14290652_14290976_14291117_14302351
ENSMUST00000074002.12	chr5	+	5194	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	0	0	0	0	multi-exon	TRUE	canonical	3	241	junction_19	27.3486858419916	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGTTCTGGTTTCTAC	NA	False	NA	21	True	ATTAAA	-21	NA	114518667	114559230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ENSMUST00000074038.7	chr12	-	2754	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTGGGATTTTAATTG	NA	False	NA	NA	False	ATTAAA	-23	NA	30961588	30943654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUST00000074038.7-0	chr12	-	1440	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	0	1314	0	906	multi-exon	FALSE	canonical	3	735	junction_4	354.017287713467	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCAGTGTCTGCCTGCT	NA	False	NA	NA	False	AATACA	-11	NA	30961588	30944968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUST00000074043.7	chr15	-	3044	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	150.900261394369	4454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300950	38294656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
ENSMUST00000074046.13	chr2	-	3502	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_12	97.9880829442692	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168399	165131074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ENSMUST00000074053.6	chr8	+	789	1	FSM	ENSMUSG00000061104.6	ENSMUST00000074053.6	789	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TATAAA	-31	NA	96551973	96552762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_96552000_96552800
ENSMUST00000074058.11	chr18	+	1953	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	103.071846570999	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGAACTTCTTTTGTT	NA	False	NA	18	True	AATAAA	-18	NA	70701259	70759202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
ENSMUST00000074072.5	chr13	-	561	1	FSM	ENSMUSG00000069117.5	ENSMUST00000074072.5	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1437	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCAATCAGATTCGAGA	NA	False	NA	NA	False	AATAAA	-33	NA	97897140	97896579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_97896600_97897100
ENSMUST00000074077.12	chr14	-	2064	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	6.0184900284226	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGACCTTTCTATCTTAT	6365	False	NA	NA	False	AATAAA	-25	NA	46628126	46620976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
ENSMUST00000074082.13	chr9	-	2129	11	FSM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	54.5879107495423	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATAGTCCTGGTTAGTGTG	8576	False	NA	-14	True	AATAAA	-31	NA	106125055	106111125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115436_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ENSMUST00000074085.12	chrX	+	855	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	0	0	0	0	multi-exon	FALSE	canonical	3	7516	junction_1	832.521615335001	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314465	73316741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000074103.12	chr13	+	2167	15	FSM	ENSMUSG00000021699.18	ENSMUST00000074103.12	2167	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	6.47640931002824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTTGTTGAACAAAACTG	NA	False	NA	NA	False	NA	NA	NA	109822689	110088008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_109822755_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ENSMUST00000074113.13	chr5	-	3966	28	FSM	ENSMUSG00000029086.16	ENSMUST00000074113.13	3966	28	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_24	9.32068513939636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTTTGGTCCTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	44259296	44150961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44215967_44215995_44220467_44220527_44251736_44252111_44258989
ENSMUST00000074127.14	chr11	-	3091	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	16.3435342295084	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGTGTTAATTTTGA	1333	False	NA	NA	False	AATAAA	-14	NA	61158011	61135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ENSMUST00000074141.14	chr17	+	562	3	FSM	ENSMUSG00000002661.15	ENSMUST00000074141.14	736	3	0	174	0	0	multi-exon	FALSE	canonical	3	32	junction_1	221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGGGATCTTCAAATG	367	False	NA	4	True	AATAAA	-14	NA	57304338	57306137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57304568_57305670_57305796_57305929
ENSMUST00000074144.11	chr1	+	4656	13	FSM	ENSMUSG00000026554.16	ENSMUST00000074144.11	4656	13	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_9	39.6410106105057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTATGTG	NA	False	NA	16	True	AGTAAA	-16	NA	171975744	172023956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000074156.7	chr2	+	1567	13	FSM	ENSMUSG00000026807.9	ENSMUST00000074156.7	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.54405625374562	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCCTTCTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	28590175	28703177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28590287_28592700_28592786_28599938_28599989_28602286_28602401_28606428_28606498_28623818_28623901_28624385_28624458_28625514_28625716_28629544_28629677_28632671_28632762_28649953_28650096_28699671_28699753_28702839
ENSMUST00000074204.12	chr10	+	3607	13	FSM	ENSMUSG00000019894.15	ENSMUST00000074204.12	3607	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.765633260354	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103203703	103255238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_103204015_103205232_103205330_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUST00000074205.7	chr15	+	747	1	FSM	ENSMUSG00000063875.7	ENSMUST00000074205.7	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCTTTAAGAGCAACAA	NA	False	NA	NA	False	NA	NA	NA	76221815	76222562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76221800_76222600
ENSMUST00000074208.6	chr9	-	659	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	504	324	0	0	multi-exon	FALSE	canonical	3	428	junction_3	47.1301389770919	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCTCAGTTTGGC	8647	False	NA	-2	True	NA	NA	NA	108444129	108443059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
ENSMUST00000074216.14	chr4	-	4369	20	FSM	ENSMUSG00000008305.19	ENSMUST00000074216.14	4369	20	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_12	85.5448239083285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTTCTGATGTGTG	NA	False	NA	NA	False	AATATA	-13	NA	72119156	72035378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72071117_72071135_72076449_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUST00000074240.4	chr2	+	1622	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	8.55496931613434	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGTATGTGGATCCTTT	2435	False	NA	17	True	AATAAA	-17	NA	26518468	26526509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
ENSMUST00000074245.5	chr14	-	792	1	FSM	ENSMUSG00000062611.5	ENSMUST00000074245.5	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCCAGATTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	88361244	88360452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_88360500_88361200
ENSMUST00000074246.7	chr9	-	3130	7	FSM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	23.4781222039204	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTTTCTGATGTGA	1782	False	NA	-10	True	AATAAA	-12	NA	7835256	7818236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUST00000074259.15	chr17	+	1466	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	13.2748718344933	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTCTGTCCATGAC	4589	False	NA	24	True	AATAAA	-18	NA	36172209	36176294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
ENSMUST00000074285.8	chr2	-	2844	13	FSM	ENSMUSG00000027210.21	ENSMUST00000074285.8	2844	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.4825309634758	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	115894993	115693780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
ENSMUST00000074352.11	chr18	-	3956	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_13	124.793898676083	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGTTGATATTGT	NA	False	NA	-8	True	AATAAA	-39	NA	13074898	12888370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ENSMUST00000074353.6	chr3	+	495	1	FSM	ENSMUSG00000060438.6	ENSMUST00000074353.6	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTGGAGTTTATGTTG	106	False	NA	-23	True	NA	NA	NA	95529588	95530083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95529600_95530100
ENSMUST00000074357.8	chr1	-	2171	10	FSM	ENSMUSG00000041926.16	ENSMUST00000074357.8	2171	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	75.0946727574148	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	False	NA	-14	True	AATAAA	-22	NA	135211822	135190449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135205126_135205276_135206504_135206646_135211299
ENSMUST00000074370.10	chr17	+	3777	11	FSM	ENSMUSG00000024182.18	ENSMUST00000074370.11	3777	11	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	74.468852549237	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATATGTGATATACTAT	NA	False	NA	11	True	AATAAA	-19	NA	26357661	26414785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
ENSMUST00000074372.6	chr13	+	2625	5	FSM	ENSMUSG00000001504.11	ENSMUST00000074372.6	2625	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.35607132140714	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTCATCTTCTTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	72776938	72782317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_72777433_72778689_72779096_72779375_72780090_72780704_72780781_72781382
ENSMUST00000074408.7	chr4	+	4182	7	FSM	ENSMUSG00000062157.7	ENSMUST00000074408.7	4182	7	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	3.02305952453618	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTGCACGCAGTTGT	NA	False	NA	7	True	AATAAA	-21	NA	135413597	135435492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135413911_135417832_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432363
ENSMUST00000074425.13	chr4	+	4300	12	FSM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	41.468099857422	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTGACTAGAATTTT	NA	False	NA	29	True	AATAAA	-18	NA	115595269	115634524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUST00000074455.9	chr7	-	2777	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	7.29725975966321	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGACTATTGTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	7212997	7205115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ENSMUST00000074512.7	chr17	+	1455	1	FSM	ENSMUSG00000079711.5	ENSMUST00000074512.7	1455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGGAAGGGTGTCAGG	NA	False	NA	NA	False	NA	NA	NA	13746452	13747907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13746500_13747900
ENSMUST00000074525.10	chr1	+	3138	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	3.104834939252	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGATATGCTCACTTA	NA	False	NA	NA	False	AATAAA	-20	NA	44590670	44835998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUST00000074552.12	chr15	+	3299	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	0	0	0	0	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239938	89257029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000074552.12-0	chr15	+	2009	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	27	1263	0	0	multi-exon	FALSE	canonical	1	369	junction_14	161.21684095061	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGCTACCCCACCT	NA	False	NA	-2	True	NA	NA	NA	89239965	89255766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000074556.7	chr6	+	1831	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGACAGTGTTTGATT	NA	False	NA	NA	False	AATAAA	-19	NA	136785241	136787072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_136785200_136787100
ENSMUST00000074574.13	chr17	+	2838	9	FSM	ENSMUSG00000043592.16	ENSMUST00000074574.13	2838	9	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_1	7.66383552798467	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTACTTTTGAATGGT	NA	False	NA	NA	False	AATAAA	-26	NA	48761928	48775714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_48762001_48766566_48767013_48767512_48767814_48769203_48769467_48770389_48770492_48770604_48770673_48771469_48771571_48771943_48772058_48774343
ENSMUST00000074575.11	chr7	-	1735	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_9	143.840189098875	1477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATGTCTTACTGCACT	9041	False	NA	0	True	AATAAA	-25	NA	45045166	45025876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ENSMUST00000074582.7	chr3	-	2799	21	FSM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	31.553882486946	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTCTGCTCCTGGA	NA	False	NA	-19	True	AATAAA	-12	NA	89257282	89246954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUST00000074606.11	chr2	-	1017	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	337	0	267	0	multi-exon	FALSE	canonical	3	68	junction_2	6.41872261435249	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTGGTCTTCTT	4269	False	NA	-4	True	AATAAA	-15	NA	60114495	60082336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ENSMUST00000074608.4	chr15	+	1024	1	FSM	ENSMUSG00000061633.4	ENSMUST00000074608.4	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAGTGCATTCTTAAA	6326	False	NA	9	True	AATAAA	-17	NA	81864740	81865764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81864700_81865800
ENSMUST00000074613.4	chr11	-	678	4	FSM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	185	0	185	0	multi-exon	FALSE	canonical	3	29	junction_1	6.84754619472471	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTACTGTTGCCTA	NA	False	NA	NA	False	AATAAA	-15	NA	30599402	30455990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_30456440_30582207_30582318_30583685_30583703_30599300
ENSMUST00000074616.7	chr13	-	3934	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	30.0305629441708	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTTCAGTTTCTATTCC	9992	False	NA	3	True	AATAAA	-21	NA	103911116	103878119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUST00000074619.6	chrX	-	1645	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_7	340.598531081683	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140701	72129900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ENSMUST00000074628.13	chr11	-	1826	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	94.6975852546475	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	False	NA	-11	True	AGTAAA	-16	NA	115977821	115969398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ENSMUST00000074642.3	chr14	-	666	1	FSM	ENSMUSG00000060680.3	ENSMUST00000074642.3	666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCCCCCCCCCCCCCCCC	5210	False	NA	NA	False	AATAAA	-21	NA	55658246	55657580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55657600_55658200
ENSMUST00000074653.6	chr18	-	5125	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	68.2948570538075	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGACTCTTTCTGAG	NA	False	NA	-8	True	AATAAA	-15	NA	77801633	77719192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
ENSMUST00000074667.9	chr17	+	2046	8	FSM	ENSMUSG00000062327.11	ENSMUST00000074667.9	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	7.70634511957782	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGGATTATTCTCTA	NA	False	NA	10	True	AATAAA	-20	NA	8653254	8661328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657447_8657622_8658741_8658872_8660424
ENSMUST00000074669.10	chr11	-	2370	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	0	0	0	0	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTTCTTGACCTTGAGT	NA	False	NA	-11	True	AATAAA	-16	NA	51497674	51490926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ENSMUST00000074669.10-0	chr11	-	1601	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	0	769	0	0	multi-exon	FALSE	canonical	3	2171	junction_1	392.745889008826	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTAAATGTGGGATG	NA	False	NA	-17	True	AATAAA	-22	NA	51497674	51491695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ENSMUST00000074680.8	chr13	+	795	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3609	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGATTTTTAATAGTG	NA	False	NA	NA	False	NA	NA	NA	108807136	108807931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108807100_108807900
ENSMUST00000074690.11	chr4	+	1573	15	FSM	ENSMUSG00000012126.17	ENSMUST00000074690.11	1573	15	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_2	24.8785827078437	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTCACAAGGCTCTC	NA	False	NA	15	True	AATAAA	-15	NA	133829893	133854087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUST00000074694.7	chr5	-	3135	8	FSM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	12.7711409363583	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCTATTGACTGAATTT	NA	False	NA	-7	True	AATAAA	-21	NA	18565353	18470132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
ENSMUST00000074733.11	chr5	+	5028	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_7	47.9165942028438	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGCCCGTTTGTG	NA	False	NA	12	True	AATATA	-17	NA	93241295	93322817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ENSMUST00000074792.7	chr9	+	2042	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGGCCTGCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	65343063	65360336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ENSMUST00000074792.7-0	chr9	+	1405	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	0	637	0	0	multi-exon	FALSE	canonical	3	114	junction_5	22.1472345903501	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTTGTATCCTTTGAAG	NA	False	NA	27	True	AATAAA	-28	NA	65343063	65359699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ENSMUST00000074807.8	chr10	+	4016	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	15.6639083466215	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGTCTCCAATGCATT	NA	False	NA	NA	False	AATAAA	-34	NA	125802121	125851228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
ENSMUST00000074834.12	chr15	-	14855	32	FSM	ENSMUSG00000022565.16	ENSMUST00000074834.12	14855	32	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_31	12.4263490987932	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGTCTTGCCTTGTGC	5607	False	NA	-8	True	AATAAA	-17	NA	76113697	76055174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76113557
ENSMUST00000074840.12	chr5	-	2029	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	81	4190	0	0	multi-exon	TRUE	canonical	3	205	junction_7	28.1735691739616	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117624	31112386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUST00000074846.14	chr5	-	3240	17	FSM	ENSMUSG00000029657.16	ENSMUST00000074846.14	3240	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	344.38590613402	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559674	149540309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUST00000074849.13	chr5	+	2669	15	FSM	ENSMUSG00000037313.17	ENSMUST00000074849.13	2669	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	250.331341649912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815471	33829545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUST00000074856.13	chr8	+	4451	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	14.3717944757881	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9628	False	NA	17	True	ATTAAA	-27	NA	11808353	11885219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ENSMUST00000074876.13	chr7	+	2537	4	FSM	ENSMUSG00000058402.15	ENSMUST00000074876.13	2537	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	4.02768199119819	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGCTGCTATTTTCATT	NA	False	NA	NA	False	CATAAA	-1	NA	29559403	29575930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29559519_29560440_29560494_29572316_29572359_29573603
ENSMUST00000074912.8	chr19	+	2176	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTAGACCAATCATTT	9071	False	NA	NA	False	AATAAA	-18	NA	46678344	46691821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ENSMUST00000074912.8-0	chr19	+	699	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	0	1477	0	-1477	multi-exon	FALSE	canonical	3	167	junction_1	5.33853912601566	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACCTCAGCTTGTT	9071	False	NA	NA	False	AATAAA	-28	NA	46678344	46690344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ENSMUST00000074913.12	chrX	-	2184	9	FSM	ENSMUSG00000016534.16	ENSMUST00000074913.12	2184	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	322.044615503815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATACTGTTCGTGTTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	37545331	37490233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_37491159_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUST00000074919.11	chr18	+	3070	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	117.532571338518	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	7	True	NA	NA	False	AATAAA	-8	NA	7868849	7927067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUST00000074941.8	chr18	+	3040	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTTCTTACTGGGACA	1059	False	NA	NA	False	AATAAA	-26	NA	24122688	24138433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24122789_24123234_24123448_24135706
ENSMUST00000074941.8-0	chr18	+	2343	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	51	646	51	-646	multi-exon	FALSE	canonical	3	128	junction_1	18.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTCTTGCATCGTT	1110	False	NA	45	True	NA	NA	NA	24122739	24137787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24122789_24123234_24123448_24135706
ENSMUST00000074950.11	chrX	+	2426	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_2	148.5	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTTGCATAGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	133501927	133507803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133502083_133503440_133503512_133505603
ENSMUST00000074957.5	chr9	+	2539	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	15.5737988261228	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGGCTCAGATGGGCT	NA	False	NA	NA	False	NA	NA	NA	46194305	46210408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
ENSMUST00000074963.9	chr2	+	1468	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	9.81144550053239	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTTTTGAAAGTATTA	NA	False	NA	6	True	AATAAA	-20	NA	69477551	69497915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
ENSMUST00000074991.10	chr15	-	3627	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_8	29.0298876160415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGCCAGCGAGGTT	NA	False	NA	-3	True	AATATA	-34	NA	79287769	79244883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUST00000075012.8	chr11	+	6218	32	FSM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_15	38.7019615966116	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438785	107577769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ENSMUST00000075044.10	chr2	-	2534	3	FSM	ENSMUSG00000027547.18	ENSMUST00000075044.10	2534	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	322.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168608949	168590251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168592381_168594373_168594661_168608831
ENSMUST00000075068.14	chr7	+	1881	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	31.3925930429327	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCCCATCTTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	34611803	34744133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUST00000075092.8	chr19	-	983	7	FSM	ENSMUSG00000059734.8	ENSMUST00000075092.8	983	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_6	645.480290601933	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962734	3958866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962466
ENSMUST00000075117.10	chr6	+	4126	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	20.7762922820135	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCGCTGCTTTCATT	NA	False	NA	12	True	AATAAA	-25	NA	90346475	90380472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ENSMUST00000075118.10	chr11	-	3117	20	FSM	ENSMUSG00000020439.18	ENSMUST00000075118.10	3117	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	23.2906482011302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8190	False	NA	-6	True	GATAAA	-17	NA	3489239	3467522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ENSMUST00000075159.5	chr5	-	7478	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_22	10.9767786450073	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCATATTTTTTCCGTT	NA	False	NA	3	True	ATTAAA	-23	NA	76452395	76360023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ENSMUST00000075162.5	chr7	+	954	5	FSM	ENSMUSG00000063903.6	ENSMUST00000075162.5	954	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	17.0934929139717	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAGTTCTGACATTCTC	NA	False	NA	7	True	AATAAA	-21	NA	43874783	43879042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43874949_43876944_43877105_43877951_43878239_43878334_43878472_43878837
ENSMUST00000075164.11	chr1	+	9115	35	FSM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	11.0094328853373	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGTGGCTAGTGGGTT	6174	False	NA	3	True	AATAAA	-13	NA	136059126	136105736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ENSMUST00000075164.11-0	chr1	+	5874	35	FSM	ENSMUSG00000041642.19	ENSMUST00000075164.11	9115	35	0	3241	0	2458	multi-exon	FALSE	canonical	3	43	junction_3	11.0094328853373	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGACTTGAAGTTTCTT	6174	False	NA	38	True	AATATA	-39	NA	136059126	136102495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ENSMUST00000075175.12	chr8	-	671	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_4	53.0518614188041	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959402	70956944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
ENSMUST00000075180.12	chr11	+	3518	14	FSM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_13	10.9230769230769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTTGGTCTGTGCCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	119833588	119893447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ENSMUST00000075181.11-1	chr7	+	3739	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	-11	-1427	0	183	multi-exon	FALSE	canonical	3	88	junction_1	52.7225441975884	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTGAATTCTTGGGGT	NA	False	NA	13	True	AATAAA	-21	NA	130467616	130515225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ENSMUST00000075192.13	chr15	-	1697	3	FSM	ENSMUSG00000058794.13	ENSMUST00000075192.13	1697	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATTGTGTCTTCTTTGA	4171	False	NA	NA	False	CATAAA	-20	NA	103163866	103156638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103157876_103159355_103159526_103163576
ENSMUST00000075214.9	chr18	-	4508	16	FSM	ENSMUSG00000024331.12	ENSMUST00000075214.9	4508	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.07245829914744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGCAGGTGGTGAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	20192535	20163689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_20165461_20166118_20166380_20167641_20167767_20168332_20168570_20171109_20171335_20174491_20174635_20174753_20175011_20176782_20176969_20177197_20177333_20178460_20178628_20179291_20179437_20180121_20180278_20181331_20181452_20183062_20183263_20184232_20184318_20192240
ENSMUST00000075221.3	chr11	+	2272	3	FSM	ENSMUSG00000058755.4	ENSMUST00000075221.3	2272	3	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_2	1.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTCAGTCTTTTAT	8293	False	NA	5	True	TTTAAA	-18	NA	4186419	4191026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4186914_4188405_4188543_4189385
ENSMUST00000075242.7	chr1	+	774	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGTCTTTGGTAATT	NA	False	NA	13	True	AATAAA	-14	NA	55127290	55130466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
ENSMUST00000075242.7-0	chr1	+	524	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	182	68	0	-68	multi-exon	FALSE	canonical	3	7281	junction_2	538.928154354136	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTCTGACCTTTA	NA	False	NA	34	True	AATAAA	-22	NA	55127472	55130398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
ENSMUST00000075253.13	chr17	-	1752	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_12	13.5285192587117	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33166376	33143661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ENSMUST00000075255.6	chr13	-	1750	4	FSM	ENSMUSG00000069206.15	ENSMUST00000075255.6	3238	4	13	1475	0	347	multi-exon	FALSE	canonical	3	47	junction_1	29.1699998095456	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGAGCTTACATTCCA	9951	False	NA	NA	False	AAGAAA	-28	NA	67599730	67590026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67591454_67596939_67597036_67597468_67597596_67599630
ENSMUST00000075258.13	chr11	-	6555	20	FSM	ENSMUSG00000040543.17	ENSMUST00000075258.13	6555	20	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	2.67542421623975	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCGCTCTGTTTTGGGCT	NA	False	NA	NA	False	NA	NA	NA	72026604	71938353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_71942187_71942666_71942796_71946955_71947140_71948845_71948996_71949211_71949361_71949663_71949781_71952299_71952417_71953920_71954070_71954888_71955084_71956291_71956463_71957931_71958105_71961128_71961314_71961713_71961837_71962224_71962415_71965244_71965481_71965784_71965862_71983353_71983402_72003082_72003191_72010912_72011009_72026479
ENSMUST00000075275.3	chr15	-	2675	21	FSM	ENSMUSG00000022454.18	ENSMUST00000075275.3	2675	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	3.2542280190546	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGCGAGATGACCATT	NA	False	NA	NA	False	NA	NA	NA	95426133	95117813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425681_95425768_95426111
ENSMUST00000075280.12	chr19	-	1018	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_7	62.4257926808842	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	False	NA	-33	True	TATAAA	-22	NA	41921735	41912004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ENSMUST00000075281.8	chr12	+	3321	16	FSM	ENSMUSG00000007411.17	ENSMUST00000075281.8	3321	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_15	105.235101875119	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCTTGCACTGTCTCC	736	False	NA	NA	False	ATTAAA	-18	NA	111540956	111622652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
ENSMUST00000075299.13	chr18	-	3656	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	7.10022697809696	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGGCTCTGATTACTGT	3293	False	NA	NA	False	AAAAAG	-37	NA	61533502	61431206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
ENSMUST00000075303.7	chr6	-	1928	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	16.3245151817249	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	35	True	ATTAAA	-21	NA	120508280	120486454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ENSMUST00000075304.14	chr19	-	2430	11	FSM	ENSMUSG00000041488.17	ENSMUST00000075304.14	2430	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	219.179287342577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGGGTACTAGTTGTA	7268	False	NA	-19	True	AATAAA	-19	NA	11796175	11752481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_11753953_11754451_11754535_11760163_11760275_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUST00000075363.10	chr4	+	1457	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	55.2466062306093	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCCTAGGTGGTCATTT	NA	False	NA	17	True	AATAAA	-22	NA	152262590	152356309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUST00000075406.12	chr4	-	10965	72	FSM	ENSMUSG00000033253.19	ENSMUST00000075406.12	10965	72	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_33	9.15204721689447	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCAGTGTGATTTTAATT	3263	False	NA	-5	True	AATATA	-13	NA	118266470	118219939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_118220669_118220812_118220882_118221798_118221916_118222036_118222443_118222545_118222669_118222824_118222979_118223298_118223513_118226376_118226452_118226540_118226622_118226814_118226906_118229016_118229217_118229318_118229445_118229526_118229607_118229713_118229982_118230151_118230329_118230400_118230502_118230621_118230753_118230940_118231074_118231155_118231254_118231369_118231537_118232187_118232322_118232654_118232823_118232925_118233091_118233239_118233325_118233529_118233695_118233799_118233919_118234860_118234973_118235063_118235170_118235262_118235366_118235444_118235598_118237363_118237494_118238550_118238651_118239780_118239983_118240154_118240227_118240343_118240432_118240507_118240676_118241001_118241188_118241377_118241442_118241668_118241777_118241891_118242034_118242210_118242505_118242608_118242688_118242806_118242900_118243051_118243194_118243940_118244188_118244300_118244417_118244647_118244853_118244939_118245105_118245213_118245338_118245504_118245600_118245740_118245912_118246119_118246234_118246330_118246446_118246569_118246739_118246971_118247067_118247254_118247334_118247678_118247895_118247970_118248186_118248372_118248488_118248596_118248750_118248913_118249057_118249752_118249883_118250010_118250246_118250642_118250814_118251016_118251228_118254809_118254917_118255310_118255453_118256227_118256360_118259599_118259771_118260017_118260192_118262622_118262749_118266359
ENSMUST00000075418.15	chr7	+	2483	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	19.4566184112245	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGTTCCTCATTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	83281166	83291536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ENSMUST00000075447.14	chr7	-	2735	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	306.654528745297	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGAAGTGAGTGGGGT	NA	False	NA	-2	True	GATAAA	-18	NA	19483498	19450568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ENSMUST00000075451.12	chr1	-	1651	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	54.0893179933677	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGTGGTTCATACTT	NA	False	NA	-1	True	AATAAA	-19	NA	194813869	194786097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ENSMUST00000075452.7-1	chr5	-	2095	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	162	7442	162	5750	multi-exon	FALSE	canonical	3	625	junction_4	34.4290574950869	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAATTTATATACCT	NA	False	NA	-1	True	ATTAAA	-16	NA	75205273	75166090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ENSMUST00000075453.9	chr5	+	899	6	FSM	ENSMUSG00000041453.13	ENSMUST00000075453.9	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	5104.64844626934	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGTGTTTTCCTTA	NA	False	NA	1	True	AATAAA	-15	NA	146770004	146772795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146770377_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUST00000075491.14	chr8	+	1698	9	FSM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	448.998590615828	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTTCTAGGCCTCTT	NA	False	NA	25	True	AATAAA	-17	NA	70980396	70987976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUST00000075510.12	chr17	-	3277	21	FSM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_15	52.6718852899723	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGCTGCCAGGCATT	NA	False	NA	2	True	AATAAA	-31	NA	56891585	56869938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ENSMUST00000075518.5	chr5	+	357	1	FSM	ENSMUSG00000078182.5	ENSMUST00000075518.5	357	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTTCCAGTCATTGT	6695	False	NA	NA	False	NA	NA	NA	29743150	29743507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_29743200_29743500
ENSMUST00000075540.8	chr10	-	4868	14	FSM	ENSMUSG00000058298.11	ENSMUST00000075540.8	4868	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	11.0630254697519	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGATGACTAAACTCTGT	NA	False	NA	6	True	AATAAA	-32	NA	53506535	53412424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819_53506228_53506490
ENSMUST00000075549.8	chr13	-	579	1	FSM	ENSMUSG00000094989.2	ENSMUST00000075549.8	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1915	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTCAGTTCCTGGCC	NA	False	NA	NA	False	NA	NA	NA	72603459	72602880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_72602900_72603500
ENSMUST00000075550.4	chr13	-	1251	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_6	26.2865816530031	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	False	NA	1	True	AATAAA	-41	NA	100912407	100896181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ENSMUST00000075578.7	chr8	-	4306	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_3	9.48536885008813	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTGTGTTATGA	6877	False	NA	0	True	ATTAAA	-18	NA	124709861	124679197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
ENSMUST00000075588.13	chr7	-	4170	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	22.3338308402298	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATCTGGCTTGAATTGG	NA	False	NA	NA	False	NA	NA	NA	143203398	143188544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ENSMUST00000075602.8	chr8	-	1151	1	FSM	ENSMUSG00000070713.6	ENSMUST00000075602.8	1151	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	776	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAATAAAAAAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	73059104	73057953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73058000_73059100
ENSMUST00000075637.11	chr4	-	6369	26	FSM	ENSMUSG00000038764.15	ENSMUST00000075637.11	6369	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_25	12.2497999983673	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTGTCAACATTTT	NA	False	NA	0	True	TATAAA	-24	NA	57301837	57190840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57301671
ENSMUST00000075641.10	chr11	-	1633	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	0	0	0	0	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCAGTGGATAGT	NA	False	NA	NA	False	AATACA	-9	NA	33113206	33102286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUST00000075641.10-0	chr11	-	1281	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	129	223	0	0	multi-exon	FALSE	canonical	3	16927	junction_8	1838.26714326292	10022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUST00000075657.8	chr7	-	5813	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTGGCCATGCATTTC	NA	False	NA	-2	True	AATAAA	-14	NA	79570397	79525072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ENSMUST00000075657.8-0	chr7	-	1370	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	8	4435	8	2751	multi-exon	FALSE	canonical	3	250	junction_1	30.5653398476117	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTTCAGTGCTGTGCTG	NA	False	NA	-3	True	AATACA	-18	NA	79570389	79529507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ENSMUST00000075666.8	chr8	-	4618	24	FSM	ENSMUSG00000058301.9	ENSMUST00000075666.8	4618	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.934304983882	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805928	70784174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ENSMUST00000075667.5	chr7	-	1502	2	FSM	ENSMUSG00000041775.8	ENSMUST00000075667.5	1502	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAACCAGTCAACTTGT	NA	False	NA	28	True	NA	NA	NA	138447989	138437561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_138438760_138447685
ENSMUST00000075671.5	chr7	-	3388	8	FSM	ENSMUSG00000030722.8	ENSMUST00000075671.5	3388	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_7	21.1920277655614	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995909	125982025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
ENSMUST00000075686.7	chr10	-	4558	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTAGAAATAATGTTGCTTA	NA	False	NA	NA	False	AATAAA	-17	NA	67384898	67380340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_67380300_67384900
ENSMUST00000075689.7	chr15	-	3284	11	FSM	ENSMUSG00000063268.13	ENSMUST00000075689.7	3284	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.74355957741627	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGAAGGACCGGCTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	76127641	76117202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76117807_76117897_76118073_76124248_76124383_76124486_76125132_76125355_76125429_76125525_76125748_76125857_76126523_76126602_76126840_76126931_76127187_76127263_76127443_76127546
ENSMUST00000075693.12	chr4	+	1321	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_9	32.5261528202145	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTCCTTCAGCTCT	NA	False	NA	28	True	AGTAAA	-18	NA	107171559	107217019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ENSMUST00000075724.9	chr8	-	1249	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	-100	2460	-100	0	multi-exon	FALSE	canonical	3	42	junction_5	11.7626261948597	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGGTGCCTCCCA	9445	False	NA	2	True	AATAAA	-18	NA	70591904	70585915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUST00000075738.6	chr7	-	468	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	37	113	0	0	multi-exon	FALSE	canonical	3	5624	junction_1	329.368419183679	965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTGTGTATTACAC	NA	False	NA	-4	True	AATAAA	-18	NA	30325539	30316398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
ENSMUST00000075759.13	chr2	+	6327	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	36.9031163995671	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	5754	False	NA	20	True	AATAAA	-21	NA	31578562	31693553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUST00000075774.5	chr13	-	2182	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTACACACGCTCAGCAA	NA	False	NA	NA	False	NA	NA	NA	34314337	34310730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUST00000075774.5-0	chr13	-	1707	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	0	475	0	-475	multi-exon	FALSE	canonical	3	472	junction_3	10.4986771653491	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGGTGTCCTCTTTTCTTT	NA	False	NA	-2	True	CATAAA	-13	NA	34314337	34311205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUST00000075775.6	chr4	+	3993	5	FSM	ENSMUSG00000067919.9	ENSMUST00000075775.6	3993	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	279.904894562421	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	2283	False	NA	NA	False	AATAAA	-19	NA	147106306	147145251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_147106458_147107818_147107913_147136962_147137048_147140055_147140183_147141715
ENSMUST00000075812.11	chr5	+	7142	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_2	30.2485912519455	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTACACTTATTTAA	NA	False	NA	12	True	ATTAAA	-15	NA	33978068	34055310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ENSMUST00000075827.5	chr12	-	5106	26	FSM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_25	7.23723704185513	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGGCCTCCCTGTTCT	NA	False	NA	-17	True	ATTAAA	-36	NA	112893396	112871438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ENSMUST00000075829.3	chr10	-	666	6	FSM	ENSMUSG00000062981.6	ENSMUST00000075829.3	666	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	1622.28826045188	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337789	95316667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337751
ENSMUST00000075836.12	chr4	-	6704	49	FSM	ENSMUSG00000028556.16	ENSMUST00000075836.12	6704	49	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	28.4259515622999	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	99008999	98825093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98834992_98842102_98842118_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ENSMUST00000075843.13	chr8	-	3000	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	54.4176930653952	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCACGTTTGCTGGTGAGA	NA	False	NA	-9	True	ATTAAA	-21	NA	84467798	84449990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUST00000075845.11	chr7	-	7507	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	322	1318	266	1215	multi-exon	TRUE	canonical	3	71	junction_6	12.7366487830285	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGCTGTCAGCTTAT	NA	False	NA	0	True	AATAAA	-21	NA	16348596	16228961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
ENSMUST00000075853.6	chr13	+	692	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGTTGAAATTAATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	51799267	51804696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_51799508_51803620_51803749_51804372
ENSMUST00000075853.6-0	chr13	+	599	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	93	0	93	0	multi-exon	FALSE	canonical	3	3514	junction_2	7.5	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTGTTGAAATTAATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	51799360	51804696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_51799508_51803620_51803749_51804372
ENSMUST00000075856.11	chr19	-	7242	21	FSM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_20	26.1194850638369	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGACTTTAAAAA	NA	False	NA	7	True	NA	NA	NA	4447105	4366197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ENSMUST00000075872.4	chr4	-	7420	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTAGCAATGTTATT	NA	False	NA	0	True	AATAAA	-25	NA	94867337	94830276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ENSMUST00000075872.4-0	chr4	-	2535	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	22	4863	0	122	multi-exon	FALSE	canonical	1	5	junction_15	17.5783170388094	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAAATTATGTTTTTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	94867315	94835139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ENSMUST00000075884.8	chr17	-	2114	16	FSM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	16.5577776286554	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6655	False	NA	-2	True	AATAAA	-22	NA	25973288	25967586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105
ENSMUST00000075888.6	chr14	+	2440	3	FSM	ENSMUSG00000061524.9	ENSMUST00000075888.6	2440	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCGACTATAGACTGGAAA	658	False	NA	NA	False	ATTAAA	-43	NA	122712846	122717264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_122714160_122715951_122716116_122716301
ENSMUST00000075895.9	chr1	+	1917	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	20.1666526114529	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954321	171962850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ENSMUST00000075896.7	chr8	+	2391	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	21.35790251874	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCCTCTGGTTAAGCTT	5194	False	NA	9	True	AATAAA	-14	NA	125739735	125760931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
ENSMUST00000075916.8	chr5	+	4384	5	FSM	ENSMUSG00000029587.17	ENSMUST00000075916.8	4384	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	16.7835484924971	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTTCCTTAAGC	NA	False	NA	19	True	AATGAA	-11	NA	143221001	143233711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143221135_143222008_143222072_143225708_143225906_143226074_143226171_143229816
ENSMUST00000075941.12	chr9	-	6786	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCGGTTTAGATACAATTC	NA	False	NA	NA	False	AATAAA	-37	NA	101128994	100982282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ENSMUST00000075941.12-0	chr9	-	6584	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	0	202	0	0	multi-exon	FALSE	canonical	3	23	junction_1	6.00788436608204	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCATATCTGTTACTGT	NA	False	NA	NA	False	AATAAA	-21	NA	101128994	100982484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ENSMUST00000075954.9	chr12	+	2209	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_4	28.2355254592363	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGGAAACTTGCAT	NA	False	NA	12	True	ATTAAA	-21	NA	24548357	24608538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ENSMUST00000075980.12	chr11	+	779	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_4	23.6893963620857	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGGCGTATACTATTTTT	4647	False	NA	NA	False	AATAAA	-19	NA	68961631	68963856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
ENSMUST00000075983.6	chrX	+	1459	1	FSM	ENSMUSG00000057615.6	ENSMUST00000075983.6	1459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTGTCTTTTCATGG	NA	False	NA	13	True	AATAAA	-26	NA	60753102	60754561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_60753100_60754600
ENSMUST00000075994.11	chr6	-	4104	10	FSM	ENSMUSG00000035357.18	ENSMUST00000075994.11	4104	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	4.85340659285368	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACATGGGTGTTTATTT	NA	False	NA	-4	True	AATAAA	-24	NA	101354858	101126569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101331354_101331463_101339099_101339187_101354126
ENSMUST00000075995.7	chr6	+	5474	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTCATTTTCTTCGCTG	NA	False	NA	NA	False	CATAAA	-17	NA	115751498	115782518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ENSMUST00000075995.7-0	chr6	+	4317	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	0	1157	0	-1157	multi-exon	FALSE	canonical	3	54	junction_11	12.5155005933459	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGTTTCTCTTTGTAG	NA	False	NA	NA	False	TATAAA	-21	NA	115751498	115781361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ENSMUST00000076022.7	chr4	+	2682	24	FSM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_18	124.035058157659	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGTTCTTGGTTGGTTGG	NA	False	NA	NA	False	ATTAAA	-22	NA	148642918	148666858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUST00000076037.9	chr13	-	469	5	FSM	ENSMUSG00000061474.12	ENSMUST00000076037.9	469	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	598.6340179943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTGAGCAGAATGAAGT	NA	False	NA	NA	False	AATAAA	-3	NA	100881096	100872659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100880296_100880333_100881037
ENSMUST00000076046.7	chr19	-	1849	12	FSM	ENSMUSG00000059326.8	ENSMUST00000076046.7	1849	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_11	40.804310256849	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9819	False	NA	-2	True	NA	NA	NA	61216856	61212839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
ENSMUST00000076051.12	chr5	+	2661	14	FSM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	64.1450833343938	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTACCAGAAGAGTCCCACA	80	False	NA	2	True	AATAAA	-18	NA	120649316	120672085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
ENSMUST00000076052.8	chr7	+	2967	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATTTATATTAATTTATA	NA	False	NA	NA	False	NA	NA	NA	92524459	92583791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUST00000076052.8-0	chr7	+	2355	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	43	569	0	0	multi-exon	FALSE	canonical	3	95	junction_2	10.1665812837945	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTGAAAAAGTAGAATG	NA	False	NA	102	True	AATAAA	-24	NA	92524502	92583222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUST00000076070.9	chr15	-	877	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	44.8289265214016	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGGAATAGTGACTGGT	NA	False	NA	-7	True	AATAAA	-21	NA	93296215	93283986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ENSMUST00000076084.6	chr2	-	787	4	FSM	ENSMUSG00000027317.9	ENSMUST00000076084.6	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	4.96655480858378	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGAGTGTGGTGTGTAT	NA	False	NA	NA	False	GATAAA	-18	NA	119060387	119048599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119048905_119049106_119049140_119049244_119049329_119060022
ENSMUST00000076095.14	chr5	-	2060	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGATGCATCCCGTGG	NA	False	NA	-19	True	ACTAAA	-32	NA	138980792	138961768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUST00000076095.14-0	chr5	-	2280	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	-595	375	369	127	multi-exon	FALSE	canonical	3	325	junction_5	43.6055042397173	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTATTTCTGATGCGC	NA	False	NA	-14	True	AATAAA	-17	NA	138981387	138962143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUST00000076110.11	chr1	-	3160	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_6	52.4404424085076	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTATTAGATGTGTACT	NA	False	NA	-6	True	CATAAA	-19	NA	151376706	151345156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ENSMUST00000076123.12	chr13	-	2391	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	4.08248290463863	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCTTTGGTCATGCCA	NA	False	NA	-1	True	NA	NA	NA	67648674	67638286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
ENSMUST00000076203.3	chr5	-	1286	2	FSM	ENSMUSG00000043614.14	ENSMUST00000076203.3	1286	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGATGCCCCGCCTCCTC	NA	False	NA	-5	True	NA	NA	NA	135107120	135101756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135102838_135106915
ENSMUST00000076212.4	chr2	+	4558	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	4.07546009672528	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGCATCTGCTCCTGG	NA	False	NA	2	True	AATAAA	-16	NA	103396654	103548768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
ENSMUST00000076219.6	chr19	-	3471	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	0	0	0	0	multi-exon	TRUE	canonical	3	1256	junction_17	93.320929312512	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATTTGTTTGTTTGTTTG	NA	False	NA	0	True	NA	NA	NA	27407225	27366097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUST00000076219.6-0	chr19	-	2108	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	0	1363	0	0	multi-exon	FALSE	canonical	3	1256	junction_17	93.320929312512	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407225	27367460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUST00000076224.12	chr15	-	4240	8	FSM	ENSMUSG00000079020.10	ENSMUST00000076224.12	4240	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	102.455166899917	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	NA	False	NA	-3	True	AATAAA	-27	NA	73489173	73452138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73489157
ENSMUST00000076228.3	chr5	-	2321	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	26.6850145212627	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACTTGATCATTTCTT	NA	False	NA	4	True	AATAAA	-42	NA	134205613	134176892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ENSMUST00000076260.12	chr12	-	958	7	FSM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	65	898	0	0	multi-exon	FALSE	canonical	3	216	junction_3	20.4728817924807	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAAAGAGAAGCCTTGG	NA	False	NA	-11	True	AATAAA	-14	NA	21336220	21320704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
ENSMUST00000076264.8	chr5	+	3299	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	41.4283440690995	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7146	False	NA	16	True	AATAAA	-17	NA	31609778	31639098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ENSMUST00000076265.13	chrX	-	2344	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	69.0213779729436	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373975	36355330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ENSMUST00000076270.13	chr11	+	5408	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_10	23.0000752217816	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAATAAATTTATT	NA	False	NA	NA	False	AATAAA	-18	NA	70735603	70833931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ENSMUST00000076270.13-1	chr11	+	3606	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	0	1802	0	0	multi-exon	TRUE	canonical	3	115	junction_10	23.0000752217816	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACACATGTATAAATCTG	NA	False	NA	12	True	AATAAA	-21	NA	70735603	70832129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ENSMUST00000076275.11	chr2	-	5941	11	FSM	ENSMUSG00000063972.14	ENSMUST00000076275.11	5941	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	17.3677862722916	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATCTGTCTGTGAAG	NA	False	NA	-6	True	AATAAA	-16	NA	38816229	38613385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
ENSMUST00000076275.11-0	chr2	-	4821	11	FSM	ENSMUSG00000063972.14	ENSMUST00000076275.11	5941	11	-183	1303	-125	-1303	multi-exon	FALSE	canonical	3	61	junction_5	17.3677862722916	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGCAAGCGCACT	NA	False	NA	NA	False	TTTAAA	-30	NA	38816412	38614688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
ENSMUST00000076313.14	chr2	-	7374	26	FSM	ENSMUSG00000061136.17	ENSMUST00000076313.14	7374	26	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGTTTCTCTTTAAGTGT	NA	False	NA	-14	True	ATTAAA	-17	NA	53081237	53024715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ENSMUST00000076313.14-1	chr2	-	5259	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	-63	-1631	0	1394	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081262	53026855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ENSMUST00000076316.6	chr8	-	3084	23	FSM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	5.93072961101822	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	78244582	77976994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
ENSMUST00000076325.12	chr7	-	2664	11	FSM	ENSMUSG00000030557.18	ENSMUST00000076325.12	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	15.401623291069	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGAAAGAAAACACCCTT	NA	False	NA	NA	False	ATTAAA	-29	NA	67022606	66883786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ENSMUST00000076352.8	chr13	-	1918	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCAATCCAATAAATTG	4869	False	NA	NA	False	AATAAA	-25	NA	33035168	33026074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
ENSMUST00000076352.8-0	chr13	-	1299	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	0	619	0	-619	multi-exon	FALSE	canonical	3	136	junction_6	10.85382677011	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCTTTCTTTTGTATGT	4869	False	NA	-2	True	AATAAA	-16	NA	33035168	33026693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
ENSMUST00000076354.13	chrX	+	1733	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	9.20736173961258	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGTGGTTTTCTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	10351396	10462844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
ENSMUST00000076362.12	chr1	+	3394	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	847.519796556727	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGTCTCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	87141635	87168210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ENSMUST00000076364.6	chr9	-	768	1	FSM	ENSMUSG00000058443.6	ENSMUST00000076364.6	768	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1033	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAGACAGGGAATCCC	NA	False	NA	NA	False	NA	NA	NA	50256268	50255500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50255500_50256300
ENSMUST00000076372.5	chr3	+	1915	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTGATGGGCACAGGG	NA	False	NA	NA	False	AATAAA	-21	NA	96079647	96084880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUST00000076372.5-0	chr3	+	1525	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	215	175	0	-175	multi-exon	FALSE	canonical	3	1297	junction_3	204.272758829953	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTCTGGTGAAGTAACT	NA	False	NA	20	True	AATAAA	-16	NA	96079862	96084705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUST00000076373.8	chr8	-	954	1	FSM	ENSMUSG00000063696.8	ENSMUST00000076373.8	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14430	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGTCAAAGCAACCAAGTC	NA	False	NA	NA	False	NA	NA	NA	103592430	103591476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_103591500_103592400
ENSMUST00000076383.8	chr11	+	4019	14	FSM	ENSMUSG00000020271.18	ENSMUST00000076383.8	4019	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	161.467713445156	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTTTGTCTTGCCAGGA	NA	False	NA	31	True	AATAAA	-42	NA	32592874	32696816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32592936_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUST00000076422.13	chr16	-	1558	6	FSM	ENSMUSG00000022847.16	ENSMUST00000076422.13	1558	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.38887743412299	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCTTTCATACATTAA	NA	False	NA	2	True	TATAAA	-23	NA	20549348	20543907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20549252
ENSMUST00000076431.13	chr2	+	3135	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_8	105.114619979018	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	644	False	NA	19	True	AATAAA	-16	NA	26279350	26287134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUST00000076443.10	chr11	+	1818	4	FSM	ENSMUSG00000040471.18	ENSMUST00000076443.10	1818	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGAGTCTGAGTGCC	NA	False	NA	NA	False	AATAAA	-14	NA	72326351	72329226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72326591_72327264_72327468_72327544_72327659_72327964
ENSMUST00000076451.7	chr19	-	685	6	FSM	ENSMUSG00000058216.14	ENSMUST00000076451.7	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	23.4469614236046	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTGCAGGGCTTGTCC	9224	False	NA	NA	False	NA	NA	NA	4109295	4107477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4107719_4107887_4107996_4108085_4108190_4108528_4108617_4108734_4108842_4109258
ENSMUST00000076454.8	chr13	-	3561	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_3	294.557588324433	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1761	False	NA	-9	True	AATAAA	-13	NA	58363433	58323976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUST00000076467.13	chr5	+	2785	11	FSM	ENSMUSG00000029283.18	ENSMUST00000076467.13	2785	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	99.5953814190196	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112246	107132298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127181_107127311_107130829
ENSMUST00000076521.7	chr1	+	4113	8	FSM	ENSMUSG00000026638.16	ENSMUST00000076521.7	4113	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	3.81190401832181	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATAAAGCTAGAG	NA	False	NA	NA	False	AATAAA	-10	NA	192835418	192854331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_192835608_192839523_192839701_192843920_192844126_192844909_192845039_192848073_192848233_192849746_192850140_192850824_192850944_192851589
ENSMUST00000076532.14	chr13	-	1504	8	FSM	ENSMUSG00000060147.16	ENSMUST00000076532.14	1504	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	178.591998815222	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCTGCCTCACTGG	NA	False	NA	2	True	AATAAA	-28	NA	34186777	34101900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180335_34186652
ENSMUST00000076587.6	chr1	-	2851	6	FSM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_5	787.975024984929	3558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTTTTCCTAGTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	30988838	30980660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985718_30988629
ENSMUST00000076592.4	chr9	-	2890	7	FSM	ENSMUSG00000047220.6	ENSMUST00000076592.4	2890	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.3748384988657	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTATTTGTGAATGA	476	False	NA	NA	False	NA	NA	NA	108305683	108280809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108283054_108283809_108283914_108289691_108289780_108290161_108290211_108294520_108294685_108298588_108298761_108305614
ENSMUST00000076615.6	chr8	-	5683	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	14.7616166270428	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTCTTCCTCTTTTTC	5213	False	NA	-4	True	AATAAA	-18	NA	70892229	70835004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ENSMUST00000076615.6-0	chr8	-	2496	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	0	3187	0	-3187	multi-exon	FALSE	canonical	3	29	junction_8	14.7616166270428	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTATATTCCTGAGC	5213	False	NA	NA	False	AATAAA	-16	NA	70892229	70838191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ENSMUST00000076623.8	chr5	-	7306	33	FSM	ENSMUSG00000037999.14	ENSMUST00000076623.8	7306	33	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_29	4.00183063578408	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTCTTGTGTCTCTTT	NA	False	NA	3	True	ATTAAA	-24	NA	62923463	62759787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_62762000_62763417_62763553_62769046_62769111_62771336_62771373_62772346_62772430_62779181_62779310_62787475_62787605_62793294_62793413_62796304_62796380_62798670_62798740_62800137_62800286_62803525_62803632_62807031_62807245_62811388_62811553_62826131_62826196_62826369_62826569_62827222_62827326_62828278_62828424_62833294_62833430_62833854_62834030_62834444_62834628_62835287_62835374_62840697_62840898_62842903_62843020_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
ENSMUST00000076635.13	chrX	-	4355	19	FSM	ENSMUSG00000036916.14	ENSMUST00000076635.13	4355	19	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_17	17.6264391759848	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCATCATCTAATACG	NA	False	NA	44	True	AATAAA	-22	NA	47681010	47630501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549
ENSMUST00000076639.11	chr3	-	1842	5	FSM	ENSMUSG00000001017.16	ENSMUST00000076639.11	1842	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	581.611769138143	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGCTTTCTGTTTAT	NA	False	NA	-3	True	NA	NA	NA	90416769	90406264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90407415_90410402_90410587_90413414_90413569_90414851_90414934_90416497
ENSMUST00000076657.11	chr7	+	339	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	12	164	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	661.918591839074	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTCTTTCGTGGGTT	267	False	NA	22	True	AATAAA	-24	NA	3620383	3623162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
ENSMUST00000076661.7	chr11	-	4185	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAGTGAAGAGACTAG	NA	False	NA	NA	False	AATAAA	-18	NA	17903875	17888755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ENSMUST00000076661.7-0	chr11	-	3043	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	0	1142	0	-1142	multi-exon	FALSE	canonical	3	153	junction_2	14.7322774885623	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACAACTTGGTTTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	17903875	17889897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ENSMUST00000076664.7	chr17	+	2058	4	FSM	ENSMUSG00000057409.8	ENSMUST00000076664.7	2058	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	54.7073019704764	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAAAGTTTA	3733	False	NA	NA	False	CATAAA	-42	NA	21711517	21730026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21711579_21720472_21720565_21725242_21725370_21728248
ENSMUST00000076687.12	chr1	+	4917	35	FSM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	17.6801894884082	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCGGTGACTGCA	NA	False	NA	NA	False	NA	NA	NA	179788674	179989731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ENSMUST00000076694.13	chr10	-	1612	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	0	0	0	0	multi-exon	FALSE	canonical	1	1248	junction_7	1021.77973983373	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGTTTTATTTTTTTGA	NA	False	NA	0	True	ATTAAA	-18	NA	90959921	90952435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
ENSMUST00000076697.13	chr11	-	1672	11	FSM	ENSMUSG00000061306.17	ENSMUST00000076697.13	1672	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	172.084979007466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAATGCTGCCTTTCCTT	4996	False	NA	NA	False	AATAAA	-17	NA	120042172	120009697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120009971_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUST00000076703.7	chr3	+	567	1	FSM	ENSMUSG00000063328.7	ENSMUST00000076703.7	567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	796	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAACAAGAAAATATTTCAA	9169	False	NA	NA	False	NA	NA	NA	129862060	129862627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_129862100_129862600
ENSMUST00000076734.8	chr17	+	4866	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	21.7366509485669	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	9446	False	NA	11	True	AATAAA	-18	NA	3165253	3249134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ENSMUST00000076757.12	chr16	+	894	5	FSM	ENSMUSG00000003531.16	ENSMUST00000076757.12	894	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	180.635510074847	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCTGTGCTACCTA	NA	False	NA	9	True	AATAAA	-15	NA	17883022	17889206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17883049_17884559_17884721_17887287_17887389_17887954_17888096_17888741
ENSMUST00000076803.12	chr2	-	3551	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	0	0	0	0	multi-exon	TRUE	canonical	3	217	junction_4	20.2170445141937	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTATTCCAAATGTCT	NA	False	NA	0	True	AATAAA	-20	NA	91540921	91504962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ENSMUST00000076807.7	chr18	+	4687	4	FSM	ENSMUSG00000102918.2	ENSMUST00000076807.7	4687	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	87.788888185743	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37939462	37974926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_37942031_37958073_37958133_37966317_37966407_37972955
ENSMUST00000076813.8	chr12	+	1141	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAATTTTATAAAAATG	NA	False	NA	NA	False	AATACA	-25	NA	21366389	21373820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ENSMUST00000076813.8-0	chr12	+	905	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	25	211	0	-211	multi-exon	FALSE	canonical	3	356	junction_4	39.1131691377725	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCATGATTATTGAT	NA	False	NA	10	True	ATTAAA	-20	NA	21366414	21373609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ENSMUST00000076831.7	chr7	-	1025	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	5.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTATTCACTTTACGC	NA	False	NA	1	True	CATAAA	-22	NA	4167859	4154258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4154787_4167091_4167187_4167457
ENSMUST00000076831.7-0	chr7	-	704	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	321	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	5.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTATTCACTTTACGC	NA	False	NA	1	True	CATAAA	-22	NA	4167538	4154258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4154787_4167091_4167187_4167457
ENSMUST00000076842.7	chr18	-	879	1	FSM	ENSMUSG00000091957.4	ENSMUST00000076842.7	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1877	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGTTTTTATATGAGAA	7434	False	NA	NA	False	NA	NA	NA	61393032	61392153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61392200_61393000
ENSMUST00000076846.11	chr8	-	1709	7	FSM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	15.61694236683	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCATCTCTGATG	5030	False	NA	-23	True	ATTAAA	-16	NA	111532535	111468471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111532365
ENSMUST00000076859.12	chr4	-	2378	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_10	17.1138146846699	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGGCCTTATCATTCC	3219	False	NA	2	True	AATAAA	-15	NA	116991160	116985851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ENSMUST00000076891.7	chr19	-	2263	11	FSM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	157.939355450122	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7441	False	NA	-26	True	AATAAA	-19	NA	55304462	55286751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
ENSMUST00000076894.11	chr1	+	5116	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATATGGTGGCACACTTC	NA	False	NA	NA	False	ATTAAA	-22	NA	159059895	159175210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ENSMUST00000076894.11-0	chr1	+	3058	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	-136	2194	-130	346	multi-exon	FALSE	canonical	3	188	junction_4	50.8633495988022	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059759	159173016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ENSMUST00000076921.7	chr11	-	911	5	FSM	ENSMUSG00000057594.13	ENSMUST00000076921.7	911	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.9048658414922	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCTCCCACCAAGAAGTTG	NA	False	NA	62	True	NA	NA	NA	120358426	120356263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007_120358067_120358188
ENSMUST00000076941.12	chr3	-	4541	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	0	0	0	0	multi-exon	TRUE	canonical	3	226	junction_14	22.0712594988997	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100876979	100846175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ENSMUST00000076949.13	chr5	+	3144	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGGCTAAGATTCATT	NA	False	NA	NA	False	NA	NA	NA	31652084	31670248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUST00000076949.13-0	chr5	+	1627	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	26	1491	0	554	multi-exon	FALSE	canonical	3	859	junction_7	68.5179542833234	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTGTGGTAAGCTTT	NA	False	NA	22	True	GATAAA	-11	NA	31652110	31668757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUST00000076957.7	chr16	-	3390	11	FSM	ENSMUSG00000060166.7	ENSMUST00000076957.7	4868	11	0	1478	0	-713	multi-exon	FALSE	canonical	3	49	junction_5	10.6494131293701	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGAGCCTTTCCTTG	NA	False	NA	-3	True	AAAAAG	-7	NA	18053000	18040094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ENSMUST00000076961.9	chr7	-	899	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTCCTGGTATTTTC	4495	False	NA	-5	True	AATAAA	-24	NA	24672179	24669176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
ENSMUST00000076961.9-1	chr7	-	774	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	116	9	0	0	multi-exon	FALSE	canonical	3	706	junction_2	24.5051015096857	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCCAATACTTTCCT	-3	True	NA	-14	True	AATAAA	-15	NA	24672063	24669185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
ENSMUST00000076991.7	chr16	-	5522	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	18.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCTTATATTTTAAAGAA	NA	False	NA	NA	False	AATAAA	-39	NA	64591524	64582498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_64587357_64589286_64589526_64591099
ENSMUST00000076991.7-0	chr16	-	1329	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	225	3968	225	-3968	multi-exon	FALSE	canonical	3	170	junction_1	18.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTGTGTGCCTTAGAA	NA	False	NA	-18	True	AATAAA	-20	NA	64591299	64586466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_64587357_64589286_64589526_64591099
ENSMUST00000077037.13	chr15	+	1538	15	FSM	ENSMUSG00000056851.15	ENSMUST00000077037.13	2952	15	234	1180	0	0	multi-exon	FALSE	canonical	3	59	junction_1	143.98145076108	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGAGCTTTTTCTTTG	2254	False	NA	5	True	ATTAAA	-5	NA	102379218	102407316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUST00000077066.8	chr19	-	2605	2	FSM	ENSMUSG00000061451.14	ENSMUST00000077066.8	4006	2	0	1401	0	-1401	multi-exon	FALSE	canonical	2	12	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTCACACGTGTGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	5135559	5130758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5133130_5135325
ENSMUST00000077078.12	chr11	-	2787	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	17.6391294821737	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGAGTGTGGAGCTTGTG	6815	False	NA	-5	True	ATTAAA	-14	NA	3402363	3365981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
ENSMUST00000077088.11	chr6	-	2577	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	49.718048005937	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCCTTTGTTTGGCAA	NA	False	NA	16	True	CATAAA	-40	NA	112673647	112596810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ENSMUST00000077128.13	chr18	-	4431	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAATTCTAAACCAG	40	True	NA	NA	False	NA	NA	NA	6135907	6024784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUST00000077128.13-0	chr18	-	4062	18	FSM	ENSMUSG00000041225.17	ENSMUST00000077128.13	4431	18	-63	432	0	0	multi-exon	FALSE	canonical	3	72	junction_11	36.3783463484115	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-23	True	NA	-23	True	AATAAA	-14	NA	6135970	6025216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUST00000077175.7	chr10	+	4975	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_10	22.7726281441689	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGAGAGGTGATGT	NA	False	NA	22	True	NA	NA	NA	84458155	84563042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ENSMUST00000077208.6	chr8	-	449	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2916	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAACTTTTTATCGCT	NA	False	NA	NA	False	AATAAA	-37	NA	108166211	108165762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_108165800_108166200
ENSMUST00000077220.14	chr5	-	1617	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_7	48.631900316511	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTGGTTTTGTATAGGT	NA	False	NA	-4	True	ATTAAA	-28	NA	110256063	110251840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
ENSMUST00000077257.12	chr2	+	4905	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTGTGTTGGGGAGT	NA	False	NA	28	True	AATATA	-18	NA	27567212	27652969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ENSMUST00000077257.12-0	chr2	+	2070	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	61	2774	0	0	multi-exon	FALSE	canonical	3	51	junction_1	15.024260216787	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTTCCAAAGATGCCCT	NA	False	NA	-6	True	TATAAA	-2	NA	27567273	27650195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ENSMUST00000077271.9	chr3	+	4078	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	154.691388272057	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTTTCTTCCTGCTTCA	NA	False	NA	11	True	ATTAAA	-25	NA	67337428	67383862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUST00000077271.9-0	chr3	+	2613	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	20	1445	0	280	multi-exon	FALSE	canonical	0	0	junction_6	154.691388272057	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAGGGAAGAAGAGAATA	NA	False	NA	NA	False	NA	NA	NA	67337448	67382417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUST00000077273.9	chr15	-	3434	11	FSM	ENSMUSG00000061731.10	ENSMUST00000077273.9	7663	11	0	4229	0	397	multi-exon	TRUE	canonical	3	89	junction_10	11.8574870862253	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAATTGTGTTGGTTGTG	NA	False	NA	-2	True	ATTAAA	-21	NA	53209555	52931662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873_52970968_53207797
ENSMUST00000077290.9	chr6	-	2399	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	0	0	0	0	multi-exon	FALSE	canonical	3	1547	junction_7	244.688060423022	2682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	8890	False	NA	23	True	TTTAAA	-24	NA	47790364	47773074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ENSMUST00000077338.12	chr7	+	1465	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	20.2938414303453	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGGCCTTTCCTCCCA	1739	False	NA	39	True	NA	NA	NA	25318838	25324976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ENSMUST00000077340.14	chr1	-	2288	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_8	16.9602476397015	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGGAGTTATAGAATG	NA	False	NA	-14	True	AATAAA	-22	NA	135211822	135190449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ENSMUST00000077353.15	chr9	-	1605	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_4	86.0870620274656	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTTTCTGTTGTAAAAC	1408	False	NA	9	True	AATAAA	-33	NA	44255525	44247635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUST00000077367.11	chr3	+	1779	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	28.1177879642051	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTCCTGTGCTATCTGTG	NA	False	NA	1	True	ATTAAA	-11	NA	89110234	89115986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUST00000077376.3	chr5	+	1677	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7.5	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCGAGGAAGCTGTGG	5398	False	NA	17	True	NA	NA	NA	124466160	124479907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124466293_124476689_124476999_124478671
ENSMUST00000077385.15	chr7	-	2546	3	FSM	ENSMUSG00000061374.15	ENSMUST00000077385.15	2546	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	130	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	2832	False	NA	-4	True	AATAAA	-14	NA	5017677	5010057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_5012205_5015676_5016022_5017623
ENSMUST00000077389.8	chr3	+	444	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	908	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCACACCGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	24387231	24387675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_24387200_24387700
ENSMUST00000077407.12	chr6	+	4118	28	FSM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_1	39.6793042772762	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	493	False	NA	NA	False	ATTAAA	-15	NA	83142901	83177098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUST00000077408.8	chr7	-	1866	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	0	1322	0	-1322	multi-exon	FALSE	canonical	3	24	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCCTCTTGATTCTAAC	NA	False	NA	NA	False	NA	NA	NA	19242292	19239732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19241536_19242229
ENSMUST00000077420.5	chr17	+	515	1	FSM	ENSMUSG00000094256.3	ENSMUST00000077420.5	515	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	AATAAA	-15	NA	83595974	83596489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_83596000_83596500
ENSMUST00000077422.12	chr2	-	2765	5	FSM	ENSMUSG00000034800.16	ENSMUST00000077422.12	2765	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	7.11951543294907	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAATACTGAAGTGTCT	NA	False	NA	-26	True	NA	NA	NA	127426597	127417459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127426549
ENSMUST00000077435.5	chr19	-	888	1	FSM	ENSMUSG00000057605.5	ENSMUST00000077435.5	888	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTTAACCTCATTAAACA	2199	False	NA	-44	True	NA	NA	NA	45439634	45438746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45438700_45439600
ENSMUST00000077451.14	chr11	+	3297	21	FSM	ENSMUSG00000017686.18	ENSMUST00000077451.14	3297	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_19	176.261425161605	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099844	80157638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80148339_80148463_80156567
ENSMUST00000077453.13	chr13	+	5491	26	FSM	ENSMUSG00000021559.15	ENSMUST00000077453.13	5491	26	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_19	8.36334861165072	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGACCCCCCCCCCCCCA	9831	False	NA	NA	False	NA	NA	NA	60749770	60910615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ENSMUST00000077477.12	chr17	-	1120	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	4.59770474137791	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTCTGTGTCCTTTGT	5573	False	NA	-4	True	AATAAA	-16	NA	35055921	35042968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
ENSMUST00000077494.13	chr17	-	1340	12	FSM	ENSMUSG00000024426.18	ENSMUST00000077494.13	1340	12	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_5	34.4359508470988	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACCGACAAAAAGTGACT	NA	False	NA	-12	True	AATAAA	-24	NA	36220938	36208500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUST00000077535.5	chr17	-	437	4	FSM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	333.755399456948	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATCATCTTCCTCTGTA	NA	False	NA	6	True	AATAAA	-42	NA	36568748	36566536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568674
ENSMUST00000077548.12	chr3	-	4946	6	FSM	ENSMUSG00000062127.12	ENSMUST00000077548.12	4946	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	30.779213765137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGGGGGAAAAGTCTT	1277	False	NA	-11	True	ATTAAA	-17	NA	104960462	104909230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960300
ENSMUST00000077577.8	chr15	-	1743	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	0	0	0	0	multi-exon	FALSE	canonical	3	3388	junction_1	4057.60923040485	5833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	31	False	NA	NA	False	AGTAAA	-18	NA	98832446	98829305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUST00000077605.12	chr16	+	2708	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_10	433.482883168413	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGTGGTCTGGCCATT	6054	False	NA	NA	False	AATAAA	-17	NA	22926508	22932696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ENSMUST00000077609.12	chr7	+	1831	15	FSM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	273.376618440941	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1183	False	NA	37	True	ATTAAA	-20	NA	127566661	127581204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ENSMUST00000077610.6	chr10	-	2275	13	FSM	ENSMUSG00000006342.16	ENSMUST00000077610.6	2275	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	20.894410470001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATACCTGTCCTAGCCTG	NA	False	NA	NA	False	NA	NA	NA	75479814	75473044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75479707
ENSMUST00000077642.12	chr1	+	4012	21	FSM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	53.7530231707948	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAACTCTCATTTTTATG	NA	False	NA	18	True	ATTAAA	-25	NA	163607151	163744678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
ENSMUST00000077666.6	chr19	+	3051	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	45.4337123975383	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCATGTTTTTGTTT	NA	False	NA	29	True	TTTAAA	-25	NA	46750042	46866801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ENSMUST00000077672.12	chr13	+	2746	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGCTTCTTTTTACAGGC	NA	False	NA	NA	False	NA	NA	NA	96679242	96774058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ENSMUST00000077672.12-0	chr13	+	4087	18	FSM	ENSMUSG00000021669.16	ENSMUST00000077672.12	2746	18	11	-1352	0	887	multi-exon	FALSE	canonical	3	25	junction_11	11.3473012507266	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTTATTTTGCAAT	NA	False	NA	13	True	AAAAAG	-19	NA	96679253	96775410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96753501_96753580_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ENSMUST00000077680.10	chrX	+	3277	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	30.4046780026437	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTCCCGTTCTTGTT	NA	False	NA	25	True	AATAAA	-36	NA	7628896	7641441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000077689.14	chr5	-	3164	14	FSM	ENSMUSG00000042121.17	ENSMUST00000077689.14	3164	14	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_13	41.4988415037558	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTGATTTGTGTTAAT	3787	False	NA	NA	False	NA	NA	NA	114127804	114080252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706
ENSMUST00000077693.10-1	chr5	-	1725	13	FSM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	291	9	0	0	multi-exon	FALSE	canonical	3	556	junction_3	56.1372326436643	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	-9	True	AATAAA	-15	NA	31350483	31344910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ENSMUST00000077709.11	chr4	+	3765	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	11.4901997962622	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	18	True	AATAAA	-18	NA	63477017	63504594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ENSMUST00000077730.7	chr1	+	7928	33	FSM	ENSMUSG00000026447.18	ENSMUST00000077730.7	7928	33	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_4	3.18795952569979	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCTATCATTATTAAAG	NA	False	NA	NA	False	AATAAA	-15	NA	132973749	133036425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_132974162_132993949_132994968_132998055_132998157_132998911_132999067_132999339_132999461_133002248_133002361_133002516_133002597_133003548_133003613_133005063_133005211_133005956_133005991_133007381_133007578_133008698_133008822_133012555_133012724_133013238_133013351_133014674_133014818_133015925_133016115_133017703_133017798_133017908_133018004_133018418_133018600_133019298_133019407_133020009_133020103_133021393_133021524_133022435_133022573_133026368_133026539_133026890_133027048_133027342_133027453_133028462_133028665_133029067_133029193_133030017_133030136_133031090_133031173_133031538_133031646_133032724_133032854_133033710
ENSMUST00000077735.13	chr12	+	2121	13	FSM	ENSMUSG00000021262.16	ENSMUST00000077735.13	2121	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	48.559814204294	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	17	True	AATAAA	-17	NA	108520978	108654775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108652308_108652376_108652666_108652725_108654287
ENSMUST00000077737.13	chr2	-	5272	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	30.2258714644446	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTGTGGTGCTCT	NA	False	NA	-6	True	AATAAA	-14	NA	27365698	27335590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ENSMUST00000077741.12	chrX	+	4976	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	32.6612240363945	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTCTTTGTACATGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	55655134	55709590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ENSMUST00000077755.11	chr1	+	1914	4	FSM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	649.932817040859	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	False	NA	100	True	AATAAA	-35	NA	152642292	152651348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_152642619_152644611_152644685_152647114_152647292_152650010
ENSMUST00000077775.11	chrX	+	3498	21	FSM	ENSMUSG00000037005.17	ENSMUST00000077775.11	3498	21	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_11	7.3109506905737	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTCTGGTTTTGC	NA	False	NA	NA	False	AAAACA	-12	NA	47197601	47225858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_47198072_47200601_47200676_47202553_47202665_47204804_47204869_47205828_47205934_47206154_47206242_47207211_47207359_47210677_47210780_47211405_47211488_47211764_47211961_47212715_47212806_47213492_47213603_47214221_47214300_47215745_47215818_47217601_47217663_47218923_47218994_47219555_47219661_47220024_47220085_47220774_47220852_47223961_47224052_47224611
ENSMUST00000077780.14	chr7	-	2480	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	4.81028989655394	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTGGATTCTTTGTGTG	NA	False	NA	7	True	TATAAA	-23	NA	23999100	23990463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
ENSMUST00000077783.5	chr6	+	4605	4	FSM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.54896090146283	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTGCCAAAAGTTGTG	8326	False	NA	15	True	AATAAA	-15	NA	72324316	72330131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_72324499_72324575_72324695_72325511_72325664_72325979
ENSMUST00000077787.8	chr7	-	1506	3	FSM	ENSMUSG00000053985.11	ENSMUST00000077787.8	1506	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTCTACACCAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	29744159	29737477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29738842_29742954_29743082_29744144
ENSMUST00000077791.8	chr8	+	1811	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	17.3076733143296	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTTTTTGGCTTTTT	NA	False	NA	13	True	AATAGA	-20	NA	112370137	112397643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
ENSMUST00000077798.13	chr2	+	2739	17	FSM	ENSMUSG00000027067.17	ENSMUST00000077798.13	2739	17	0	0	0	0	multi-exon	FALSE	canonical	3	1260	junction_7	140.688874382447	2374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867577	84877453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUST00000077821.10	chr15	-	4494	11	FSM	ENSMUSG00000033697.17	ENSMUST00000239134.2	4494	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	15.2761251631426	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8169	False	NA	-4	True	AATAAA	-17	NA	76702370	76608184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ENSMUST00000077839.13	chr10	-	1813	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	30.2691628926573	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	False	NA	NA	False	AATAAA	-21	NA	67121084	67102467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ENSMUST00000077853.5	chr13	+	7844	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_7	21.2239035437088	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059284	35090047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ENSMUST00000077856.13	chr11	+	614	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2241	False	NA	62	True	ATTAAA	-18	NA	101333123	101336355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUST00000077856.13-0	chr11	+	527	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	87	0	-53	0	multi-exon	FALSE	canonical	3	8302	junction_4	1985.8892844265	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2328	False	NA	62	True	ATTAAA	-18	NA	101333210	101336355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUST00000077876.4	chrX	-	1002	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	142.088880634622	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266169	100255564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUST00000077886.7	chr6	+	1236	1	FSM	ENSMUSG00000094973.3	ENSMUST00000077886.7	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGCTGGTGCACCGA	NA	False	NA	NA	False	NA	NA	NA	136305540	136306776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_136305500_136306800
ENSMUST00000077909.9	chr7	-	4612	20	FSM	ENSMUSG00000031024.14	ENSMUST00000077909.9	4612	20	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_19	35.017605386157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109215960	109123126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109215504
ENSMUST00000077915.10	chr11	+	364	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	0	0	0	0	multi-exon	FALSE	canonical	3	5140	junction_1	6068.87239835375	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559373	114563157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000077915.10-0	chr11	+	303	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	61	0	0	0	multi-exon	FALSE	canonical	3	5140	junction_1	6068.87239835375	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559434	114563157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000077916.12	chr3	+	1114	7	FSM	ENSMUSG00000048416.16	ENSMUST00000077916.12	1114	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	4.04145188432738	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGTGGTTAAATTGGT	NA	False	NA	1	True	AATAAA	-14	NA	67281429	67307331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_67281596_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUST00000077938.10	chr17	-	1405	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	8.07387763097757	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGCAGGTCTGTTTATT	4253	False	NA	-1	True	NA	NA	NA	26004647	26001762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ENSMUST00000077955.6	chr8	-	2304	9	FSM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	3.67423461417477	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGAGTTCTGAAAGTGTA	NA	False	NA	0	True	AATAAA	-19	NA	95644726	95629496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95644609
ENSMUST00000077967.13	chr7	+	2647	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	18.4113984215413	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCGTGTCTGGGTCT	NA	False	NA	11	True	AATAAA	-17	NA	66339705	66364492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ENSMUST00000077977.14	chr2	+	3381	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	8.28385310240484	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGTGTCTTGCTGGGT	NA	False	NA	6	True	GATAAA	-16	NA	30254244	30275533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ENSMUST00000077983.13	chr2	-	1955	8	FSM	ENSMUSG00000026927.18	ENSMUST00000077983.13	1955	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	82.5556089640708	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279309	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26279160
ENSMUST00000077991.4	chr9	+	1348	1	FSM	ENSMUSG00000056904.4	ENSMUST00000077991.4	1348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCCATTCCTCGAGCC	NA	False	NA	NA	False	NA	NA	NA	90979201	90980549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_90979200_90980500
ENSMUST00000078001.7	chr7	-	1059	6	FSM	ENSMUSG00000062773.7	ENSMUST00000078001.7	1059	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	1.72046505340853	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCGCGTGCATGCATG	1002	False	NA	NA	False	AATAAA	-21	NA	24371475	24367431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24367828_24367933_24368066_24369138_24369325_24369757_24369899_24370003_24370109_24371376
ENSMUST00000078021.13	chr5	-	2015	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_15	25.8010551033179	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGCATAATTCTTTT	NA	False	NA	NA	False	CATAAA	-27	NA	107745505	107696832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ENSMUST00000078034.5	chr19	-	714	1	FSM	ENSMUSG00000062456.5	ENSMUST00000078034.5	714	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	593	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTTAGTAAAAATGTG	NA	False	NA	NA	False	AATAAA	-35	NA	32443978	32443264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_32443300_32444000
ENSMUST00000078050.7	chr2	+	2502	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	31.1088411870323	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCAATGTTTTCATTTAA	NA	False	NA	24	True	AATAAA	-25	NA	167345008	167358093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUST00000078053.13	chr14	+	3157	11	FSM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	27.0325729445053	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGGTTTCCTGACTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	67953546	67979759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
ENSMUST00000078058.5	chr8	+	1795	2	FSM	ENSMUSG00000049184.7	ENSMUST00000078058.5	1795	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAGTTTGGATTCTTATT	NA	False	NA	22	True	AATAAA	-16	NA	33876352	33907495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_33877237_33906584
ENSMUST00000078061.13	chr17	+	3746	27	FSM	ENSMUSG00000013787.16	ENSMUST00000078061.13	3746	27	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_9	83.6524314646073	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTCTGGTGATTGTT	6700	False	NA	15	True	AATAAA	-16	NA	35117474	35133023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUST00000078079.11	chr18	+	2865	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	0	0	0	0	multi-exon	FALSE	canonical	3	1498	junction_1	106	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAATGTTTTTTTTTTCT	NA	False	NA	20	True	ATTAAA	-17	NA	46730770	46743278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_46730868_46731707_46731768_46740570
ENSMUST00000078079.11-1	chr18	+	1852	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	51	962	0	0	multi-exon	FALSE	canonical	3	1498	junction_1	106	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGAGAGGCTTTTTTT	NA	False	NA	27	True	AATAAA	-21	NA	46730821	46742316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_46730868_46731707_46731768_46740570
ENSMUST00000078084.7	chr4	+	1749	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	305.166348079207	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTAGTTGTGAATGGTAG	NA	False	NA	9	True	NA	NA	NA	134650902	134654982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
ENSMUST00000078090.12	chr4	-	2078	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	0	3991	0	0	multi-exon	TRUE	canonical	2	10	junction_9	3.7	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGGAAAAAAATAAAAA	NA	False	NA	NA	False	AAAACA	-18	NA	87951601	87692152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ENSMUST00000078124.8	chr12	-	2940	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGCTGTTGAGATG	NA	False	NA	-11	True	AATAAA	-12	NA	54909662	54905601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ENSMUST00000078124.8-0	chr12	-	1461	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	0	1479	0	0	multi-exon	FALSE	canonical	3	200	junction_2	55.9603033904888	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGCCTTGTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	54909662	54907080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ENSMUST00000078137.12	chr19	+	2738	8	FSM	ENSMUSG00000024947.18	ENSMUST00000078137.12	2738	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	138.784225416615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	686	False	NA	21	True	GATAAA	-21	NA	6385140	6390919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389716
ENSMUST00000078139.13	chr4	-	6694	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	108.084473020543	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	9669162	9449078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUST00000078139.13-0	chr4	-	4399	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	76	2219	0	-2219	multi-exon	FALSE	canonical	0	0	junction_21	108.084473020543	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCACTTTAATTTTTC	4	True	NA	-13	True	AATAAA	-8	NA	9669086	9451297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUST00000078155.12	chr6	-	2437	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_10	46.9877234375763	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	8	True	NA	-1	True	AATAAA	-19	NA	29212296	29200435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ENSMUST00000078214.8	chr6	-	1583	13	FSM	ENSMUSG00000059182.9	ENSMUST00000078214.8	1583	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	147.952390052416	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGACTTAGCCTGGTA	862	False	NA	-7	True	AATAAA	-18	NA	51989495	51836145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980715_51989314
ENSMUST00000078218.11	chr15	+	1371	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	9.92534113742268	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAAGTGGCTGTTGTC	NA	False	NA	17	True	AATAAA	-18	NA	82984404	83000875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ENSMUST00000078222.9	chr2	+	1518	10	FSM	ENSMUSG00000000308.15	ENSMUST00000078222.9	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	32.5602954456217	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTGTGTTATTTCTAT	801	False	NA	32	True	AGTAAA	-20	NA	121188256	121194218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121188341_121189276_121189483_121190059_121190259_121190425_121190522_121191036_121191259_121191383_121191470_121191586_121191711_121193155_121193291_121193455_121193582_121193978
ENSMUST00000078259.8	chr1	+	2975	6	FSM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	-7	1911	0	-1911	multi-exon	FALSE	canonical	3	202	junction_5	16.7164589551735	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACTGTATTTTAAGGA	NA	False	NA	21	True	AATAAA	-25	NA	190795220	190816760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367
ENSMUST00000078286.6	chr17	-	2606	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	0	0	0	0	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAGCCGTTCGCCCAG	NA	False	NA	NA	False	NA	NA	NA	47093582	47084832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUST00000078286.6-1	chr17	-	2027	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	-16	595	0	-595	multi-exon	FALSE	canonical	3	1943	junction_1	138.303309994937	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTGCGTGTGAGTA	NA	False	NA	-7	True	AGTAAA	-12	NA	47093598	47085427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUST00000078332.13	chr1	+	1894	9	FSM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	190.780264637095	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702610	82730111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ENSMUST00000078357.5	chr16	-	3440	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	14.2894191624432	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAATTGTATGGTGTTTGT	NA	False	NA	-5	True	ATTAAA	-31	NA	10131832	10099612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
ENSMUST00000078362.13	chr11	-	1889	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26543920	26421403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ENSMUST00000078362.13-0	chr11	-	1591	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	298	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	13.1368332899862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26543622	26421403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ENSMUST00000078367.12	chr9	+	3981	16	FSM	ENSMUSG00000037784.15	ENSMUST00000078367.12	3981	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.14997741639937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCGTTCTTTGTTATT	NA	False	NA	NA	False	AATATA	-21	NA	99511594	99551309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_99511723_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
ENSMUST00000078374.13	chr9	-	3520	27	FSM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	216.387107234962	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTTGTTTTTTTGCCC	8191	False	NA	-1	True	AATAAA	-17	NA	95394049	95343030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ENSMUST00000078419.2	chr17	-	552	1	FSM	ENSMUSG00000058542.4	ENSMUST00000078419.2	552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCTCTGTGCCTTCCAA	NA	False	NA	NA	False	NA	NA	NA	6182680	6182128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6182100_6182700
ENSMUST00000078432.5	chr7	+	772	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	6459	junction_1	109.515092820832	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGAGTCCACTGACTTC	2809	False	NA	-19	True	NA	NA	NA	4795988	4797525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUST00000078434.8	chr14	-	1970	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_1	4.03827838412513	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATAAAATACTT	9186	False	NA	NA	False	TATAAA	-25	NA	70526920	70455346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
ENSMUST00000078478.8	chr9	-	2908	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.9293765408777	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACAGCTTACGGTG	NA	False	NA	-2	True	AATAAA	-16	NA	96771482	96705396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
ENSMUST00000078509.12	chr17	-	2403	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.2615789047686	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGTGTCGACCTTATT	1945	False	NA	-17	True	NA	NA	NA	31856139	31831614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ENSMUST00000078528.7	chr11	-	1175	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	0	0	0	0	multi-exon	FALSE	canonical	3	4814	junction_4	225.05234946563	2394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTCTTTCGCCCACATCAG	NA	False	NA	-26	True	AATAAA	-32	NA	70873852	70868661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ENSMUST00000078572.9	chr9	-	1894	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	21.338541031039	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGCCCATGGTGACCA	6124	False	NA	-16	True	AATAAA	-17	NA	21504068	21499977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
ENSMUST00000078573.5	chr13	-	571	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	492.52884856287	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACAAGCTGCCCTGTAC	NA	False	NA	NA	False	NA	NA	NA	100881165	100872584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
ENSMUST00000078574.12	chrX	-	1179	9	FSM	ENSMUSG00000058328.14	ENSMUST00000078574.12	1650	9	0	471	0	303	multi-exon	TRUE	canonical	3	269	junction_2	77.2438306598009	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
ENSMUST00000078589.7	chr8	-	523	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	157.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACTGGACAGCGTGGGC	NA	False	NA	-20	True	NA	NA	NA	117648178	117616271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_117616599_117637866_117637974_117648089
ENSMUST00000078616.12	chr2	+	3127	13	FSM	ENSMUSG00000026930.16	ENSMUST00000078616.12	3127	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	5.58954877924467	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	26205603	26238249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26234613_26234771_26235162_26235372_26236818
ENSMUST00000078647.11	chr6	-	4605	3	FSM	ENSMUSG00000030055.17	ENSMUST00000078647.11	4605	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTCTATCACCTCTGG	2694	False	NA	7	True	ATTAAA	-27	NA	87788761	87765834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87769823_87771595_87771780_87788328
ENSMUST00000078665.13	chr8	+	1333	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	36.5391485259304	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCATCCTTGGTGTCAG	NA	False	NA	23	True	AATAAA	-29	NA	85798385	85801791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUST00000078676.6	chr4	-	547	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	25.9272486435067	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTCCTTCCTTTGCC	7657	False	NA	-7	True	AATAAA	-17	NA	115932268	115924161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
ENSMUST00000078686.8	chr7	-	2372	4	FSM	ENSMUSG00000060402.9	ENSMUST00000078686.8	2372	4	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_3	4.02768199119819	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTCCAGCTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	34512111	34373892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34375670_34376059_34376098_34447486_34447703_34511770
ENSMUST00000078690.13	chr5	+	2608	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTGTATATACCAAGAC	NA	False	NA	NA	False	NA	NA	NA	139186434	139234304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUST00000078690.13-0	chr5	+	3912	22	FSM	ENSMUSG00000036817.15	ENSMUST00000078690.13	2608	22	-13	-1291	0	0	multi-exon	FALSE	canonical	3	224	junction_6	196.102233969428	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186421	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUST00000078717.7	chr16	+	8604	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	10.2089285540757	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTGGTCCGGTCAT	NA	False	NA	22	True	AATAAA	-22	NA	37688750	37709220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ENSMUST00000078729.9	chr13	-	472	1	FSM	ENSMUSG00000078180.5	ENSMUST00000078729.9	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTCCAGATGGCTAAT	NA	False	NA	NA	False	NA	NA	NA	120766201	120765729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_120765700_120766200
ENSMUST00000078739.7	chr18	+	1355	1	FSM	ENSMUSG00000058625.7	ENSMUST00000078739.7	1355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTCCTTGAGCCCCTG	NA	False	NA	NA	False	NA	NA	NA	82356586	82357941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_82356600_82357900
ENSMUST00000078752.10	chr2	+	3902	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	0	313	0	0	multi-exon	TRUE	canonical	3	136	junction_8	32.2490309931942	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAGTTTTGATTATAT	NA	False	NA	8	True	AATAAA	-17	NA	121697450	121766388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ENSMUST00000078766.10	chr9	+	467	1	FSM	ENSMUSG00000058838.10	ENSMUST00000078766.10	467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGTGTATGCGTTAAT	NA	False	NA	NA	False	NA	NA	NA	83291712	83292179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_83291700_83292200
ENSMUST00000078775.13	chrX	-	1162	9	FSM	ENSMUSG00000079845.9	ENSMUST00000078775.13	1162	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	89.7743699504486	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126084	72117950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125590_72125674_72125988
ENSMUST00000078800.13	chr17	-	3653	10	FSM	ENSMUSG00000023994.14	ENSMUST00000078800.13	3653	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_8	14.2837212013545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTTTGGTGTTTGTT	NA	False	NA	-4	True	AATAAA	-26	NA	48716793	48693912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48706009_48706094_48707465_48707609_48716653
ENSMUST00000078803.5	chr15	-	911	10	FSM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	0	0	0	0	multi-exon	TRUE	canonical	3	892	junction_9	85.8889607589177	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9603	False	NA	-25	True	AATAAA	-17	NA	76510274	76506308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ENSMUST00000078804.12	chr16	+	491	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	0	0	0	0	multi-exon	FALSE	canonical	3	3858	junction_1	2402.68870226669	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTCTCTTTGTTAAG	NA	False	NA	34	True	AATAAA	-45	NA	32876822	32880559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000078816.5	chr7	-	3574	1	FSM	ENSMUSG00000062944.5	ENSMUST00000078816.5	3574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTGTTTATGCTGCT	5273	False	NA	NA	False	AATAAA	-14	NA	127837203	127833629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127833600_127837200
ENSMUST00000078830.11	chr11	+	2199	7	FSM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	1	1415	0	0	multi-exon	FALSE	canonical	3	504	junction_1	153.756029692063	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642947	29692916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUST00000078912.7	chr3	-	3368	18	FSM	ENSMUSG00000027889.18	ENSMUST00000078912.7	3368	18	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_17	58.315690197265	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAAAGATTATTTA	NA	False	NA	-31	True	NA	NA	NA	107992715	107981402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107992562
ENSMUST00000078918.10	chr7	-	1053	6	FSM	ENSMUSG00000062797.15	ENSMUST00000078918.10	1053	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	509.123403508422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGAAATACCATTACA	NA	False	NA	-1	True	AATAAA	-18	NA	89590274	89567910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89579527_89579669_89584934_89585173_89590176
ENSMUST00000078944.13	chrX	+	4350	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_10	29.4423164849507	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGTCTGCTTTGTAA	NA	False	NA	17	True	AATAAA	-17	NA	52001142	52045820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUST00000078945.12	chr5	-	2538	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_9	46.2793450448229	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTATATTTTCTTTAC	NA	False	NA	2	True	AATAAA	-36	NA	88824030	88807306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ENSMUST00000078953.9	chr15	-	2034	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	-48	2599	0	0	multi-exon	FALSE	canonical	3	25	junction_9	20.4859251730037	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080699	89069014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ENSMUST00000078961.6	chr17	+	2631	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	121.140785865042	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATTGTGATGTGTTTG	NA	False	NA	8	True	AATAAA	-20	NA	27136064	27151557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ENSMUST00000078975.8	chr11	+	1573	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_4	4.31740662898458	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTCTTGTCTGTGCTC	NA	False	NA	5	True	AATAAA	-19	NA	102080494	102084907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUST00000078976.9-1	chr15	-	2434	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	0	1983	0	1618	multi-exon	FALSE	canonical	3	6501	junction_2	212.49836600679	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	155	False	NA	-15	True	ATTAAA	-10	NA	37007646	36999253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ENSMUST00000078977.14	chr2	-	3027	10	FSM	ENSMUSG00000058835.15	ENSMUST00000078977.14	3027	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	139.976188451227	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTGGATATTGTTAA	NA	False	NA	-7	True	AATAAA	-16	NA	22930242	22830380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22832060_22836587_22836774_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ENSMUST00000079009.11	chr12	+	4809	36	FSM	ENSMUSG00000054003.14	ENSMUST00000079009.11	4809	36	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.2893147974517	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTTTTGCTCAGAGA	NA	False	NA	NA	False	AATAAA	-24	NA	111937992	112035288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992109_111992208_111992273_111992344_111992409_111992686_111992732_111993528_111993583_111997621_111997739_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
ENSMUST00000079012.13	chr6	+	4450	8	FSM	ENSMUSG00000025702.16	ENSMUST00000079012.13	4450	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	11.0564414690796	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	116314984	116386501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_116315177_116315346_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ENSMUST00000079028.6	chr15	+	3275	16	FSM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	10.1552394796425	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGTGGATGATGATTT	94	False	NA	-2	True	ATTAAA	-8	NA	34495468	34530783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
ENSMUST00000079033.6	chr19	-	885	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_4	51.0165414351071	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACAAATGTGGGT	963	False	NA	NA	False	ATTAAA	-5	NA	44134885	44127697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
ENSMUST00000079038.4	chr8	-	9074	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.65433532488012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTCTTGTGCCCTTTTA	4306	False	NA	-2	True	ATTAAA	-17	NA	80784635	80692481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
ENSMUST00000079041.7	chr10	-	3489	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	6.41774882649672	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGGCTGATAAGCAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	117582270	117569583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
ENSMUST00000079080.13	chr11	-	3019	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	27.9861076647365	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385122	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
ENSMUST00000079085.11	chr3	-	480	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	0	0	0	0	multi-exon	FALSE	canonical	3	6284	junction_4	1283.0290331867	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTACGCTTCCGTTATCT	NA	False	NA	-19	True	AATAAA	-12	NA	130524047	130520487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
ENSMUST00000079121.4	chr17	-	1219	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTACTGTGTTGTG	NA	False	NA	-9	True	ATTAAA	-18	NA	13135232	13130235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUST00000079121.4-0	chr17	-	977	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	242	0	0	0	multi-exon	FALSE	canonical	3	996	junction_2	30.9120616516523	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTACTGTGTTGTG	NA	False	NA	-9	True	ATTAAA	-18	NA	13134990	13130235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUST00000079125.8	chr2	-	583	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	220	0	220	0	multi-exon	FALSE	canonical	3	384	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTGTGTCTTGCGTT	NA	False	NA	-4	True	AATAAA	-23	NA	156154447	156153765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156154323_156154421
ENSMUST00000079158.13	chr16	-	5811	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_25	98.9917903368873	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245144	20150052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUST00000079205.14	chr1	-	2892	4	FSM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2.16024689946929	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGGAAACTGGTAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	75455915	75451212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
ENSMUST00000079213.6	chr4	-	1516	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	0	0	0	0	multi-exon	TRUE	canonical	3	462	junction_7	44.4233283170614	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436533	108422066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ENSMUST00000079223.11	chr4	+	1891	16	FSM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	4.66476151587624	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCACTTATGTCTGT	NA	False	NA	10	True	AATAAA	-23	NA	95445743	95815176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
ENSMUST00000079237.7	chr12	-	2488	2	FSM	ENSMUSG00000069755.6	ENSMUST00000079237.7	2488	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACAACTCACACTCCAC	NA	False	NA	NA	False	NA	NA	NA	20952660	20948574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_20950936_20952533
ENSMUST00000079242.4	chr17	+	2175	3	FSM	ENSMUSG00000051341.7	ENSMUST00000079242.4	2175	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATCTGGTATTCTCTG	NA	False	NA	NA	False	NA	NA	NA	21775307	21782328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21775338_21777396_21777524_21780310
ENSMUST00000079252.13	chr10	+	5447	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTCCGTTGATTAGCAC	2216	False	NA	4	True	ATTAAA	-17	NA	71183592	71221715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ENSMUST00000079252.13-0	chr10	+	3642	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	73	1732	0	-1732	multi-exon	FALSE	canonical	3	262	junction_3	36.3130830417909	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2289	False	NA	7	True	AATAAA	-21	NA	71183665	71219983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ENSMUST00000079258.7	chr7	+	2760	10	FSM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	11.8415464455544	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTGGGAAATCAAGGTG	NA	False	NA	9	True	AATAAA	-18	NA	26958149	26981566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ENSMUST00000079261.7	chr5	-	882	1	FSM	ENSMUSG00000057244.7	ENSMUST00000079261.7	882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTTTTTATATGAGAAAAA	4041	False	NA	NA	False	NA	NA	NA	129700935	129700053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129700100_129700900
ENSMUST00000079278.5	chr2	-	1455	3	FSM	ENSMUSG00000059361.7	ENSMUST00000079278.5	1455	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGTGGCTTCCTTTTGA	8689	False	NA	-2	True	AATAAA	-17	NA	152218558	152210674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152211844_152216015_152216211_152218467
ENSMUST00000079282.8	chr7	-	4255	20	FSM	ENSMUSG00000031024.14	ENSMUST00000079282.8	4255	20	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_19	31.6037621800557	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTGTGTTCCTTTCAC	NA	False	NA	2	True	AATAAA	-26	NA	109216354	109123117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264
ENSMUST00000079300.13	chr3	+	5638	14	FSM	ENSMUSG00000036885.15	ENSMUST00000079300.13	5638	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	5.33715346421589	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTAGCATTATAGAAGA	NA	False	NA	NA	False	AATAAA	-20	NA	62245764	62369642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_62247995_62248764_62248805_62252566_62252713_62285008_62285066_62288251_62288413_62326969_62327123_62330921_62331052_62334009_62334085_62336301_62336392_62339908_62340064_62355513_62355724_62365793_62365862_62367030_62367136_62367624
ENSMUST00000079314.12	chr14	-	4171	7	FSM	ENSMUSG00000062014.14	ENSMUST00000079314.12	4171	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	212.21091447478	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059699	47045605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47049281_47051700_47051775_47052361_47052444_47053054_47053106_47053634_47053685_47054842_47054940_47059557
ENSMUST00000079323.8	chr7	-	4327	23	FSM	ENSMUSG00000032776.10	ENSMUST00000079323.8	5802	23	0	1475	0	1108	multi-exon	FALSE	canonical	1	1	junction_22	2.92220057462644	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCTCATGTCTGT	NA	False	NA	NA	False	NA	NA	NA	71956356	71729052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_71730606_71732834_71732933_71739918_71740029_71752891_71753002_71771445_71771488_71776885_71777009_71810887_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861474_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896855_71896919_71908846_71909380_71956218
ENSMUST00000079324.14	chr5	-	2537	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_2	34.1641259217911	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTTTGTTGATGATTT	NA	False	NA	-4	True	AATAAA	-21	NA	148489472	148441444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
ENSMUST00000079327.12	chr19	+	2639	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	99.9901229690114	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGATGTATGTATGTGTT	588	False	NA	21	True	GATAAA	-21	NA	6385042	6390919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000079362.13	chr18	+	9889	16	FSM	ENSMUSG00000005871.16	ENSMUST00000079362.13	12811	16	-60	2982	0	-2619	multi-exon	FALSE	canonical	3	36	junction_11	20.0838243370131	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCATTCCTAAAATTTA	NA	False	NA	15	True	AATAAA	-26	NA	34353976	34452623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ENSMUST00000079363.6	chr17	+	1444	1	FSM	ENSMUSG00000061062.6	ENSMUST00000079363.6	1444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAAGGTCTGCAGCC	NA	False	NA	NA	False	NA	NA	NA	78799010	78800454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_78799000_78800500
ENSMUST00000079390.7	chr10	-	5402	5	FSM	ENSMUSG00000063804.9	ENSMUST00000079390.7	5402	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	19.8368344248774	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTTTGTGTGCTGTGA	NA	False	NA	0	True	AATAAA	-33	NA	45346297	45252715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45346146
ENSMUST00000079400.6	chr12	+	2722	15	FSM	ENSMUSG00000037686.7	ENSMUST00000079400.6	2722	15	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	6.52467842666814	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTGGCCTGGATGGGT	NA	False	NA	2	True	AATAAA	-16	NA	112073112	112093993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112073408_112078625_112078735_112079414_112079527_112080813_112080940_112082000_112082085_112082834_112082962_112086387_112086501_112087298_112087482_112087586_112087701_112088183_112088298_112089377_112089474_112089723_112089888_112091243_112091331_112092745_112092846_112093095
ENSMUST00000079403.11	chr7	+	2981	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	11.3032434995212	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTGTGATGGATTCATG	NA	False	NA	15	True	ATTAAA	-27	NA	140521493	140527577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUST00000079405.15	chr6	+	3158	3	FSM	ENSMUSG00000042097.18	ENSMUST00000079405.15	3158	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCCACACGACTACAGG	NA	False	NA	NA	False	AATAAA	-16	NA	117840037	117850252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117840104_117846178_117846235_117847216
ENSMUST00000079413.11	chr17	-	3543	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	0	0	0	0	multi-exon	FALSE	canonical	2	296	junction_7	83.3980815127063	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCATGGCTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28705123	28618067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ENSMUST00000079414.12	chr7	+	2610	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	0	0	0	0	multi-exon	FALSE	canonical	2	65	junction_12	24.7032386540712	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATGTTTATTTCAG	NA	False	NA	10	True	AATAAA	-20	NA	35096479	35138114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ENSMUST00000079419.12	chr14	+	883	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	1636	junction_1	5972.09066315046	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198666	4200736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ENSMUST00000079421.15	chr17	+	2581	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_5	66.597787546753	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5569	False	NA	12	True	AATAAA	-23	NA	34128418	34134564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ENSMUST00000079424.11	chr2	-	3254	6	FSM	ENSMUSG00000035778.18	ENSMUST00000079424.11	3254	6	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	29.2054789380349	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTCTGGTATGGATTA	NA	False	NA	1	True	AATAAA	-17	NA	35322645	35290190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525
ENSMUST00000079464.13	chr1	-	2083	4	FSM	ENSMUSG00000026202.14	ENSMUST00000079464.13	2083	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	118.104473525208	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGCTTTCTTTTGGC	NA	False	NA	-2	True	ATTAAA	-20	NA	75195268	75191615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195179
ENSMUST00000079490.6	chrX	-	2837	1	FSM	ENSMUSG00000055733.7	ENSMUST00000079490.6	2837	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGACTTACCATTTTCT	NA	False	NA	NA	False	AATAAA	-11	NA	121307098	121304261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_121304300_121307100
ENSMUST00000079496.9	chr7	-	1238	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	0	0	0	0	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGCCTGAAGTGTC	NA	False	NA	-25	True	AATAAA	-15	NA	4815589	4811012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
ENSMUST00000079496.9-0	chr7	-	999	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	239	0	0	0	multi-exon	FALSE	canonical	3	9878	junction_1	292.246851518066	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGCCTGAAGTGTC	NA	False	NA	-25	True	AATAAA	-15	NA	4815350	4811012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
ENSMUST00000079510.6	chr8	-	3713	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_13	118.126552277382	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73228963	73214332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ENSMUST00000079542.13	chrX	+	3163	9	FSM	ENSMUSG00000000134.18	ENSMUST00000079542.13	3163	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	94.1407689314252	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGAGTCTCCCGTTCTT	NA	False	NA	22	True	AATAAA	-33	NA	7628902	7641438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000079545.6	chr11	-	2241	9	FSM	ENSMUSG00000057286.7	ENSMUST00000079545.6	3643	9	0	1402	0	-816	multi-exon	FALSE	canonical	3	12	junction_5	7.34421541078419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTTTTCCACATTTC	NA	False	NA	0	True	AATAAA	-19	NA	116585694	116567530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116568508_116569291_116569392_116570732_116570817_116572684_116572789_116575171_116575311_116575922_116576092_116576661_116576837_116581137_116581199_116585262
ENSMUST00000079560.10	chr6	-	3839	14	FSM	ENSMUSG00000040669.15	ENSMUST00000079560.10	3839	14	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_10	176.028608487135	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTACTGCATTCTGCT	9596	False	NA	-12	True	ATTAAA	-41	NA	122313974	122294689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ENSMUST00000079589.11	chr11	-	3286	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_14	97.0817686596932	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCTA	9161	False	NA	60	True	NA	NA	NA	102207506	102196749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ENSMUST00000079594.12	chr17	+	6380	32	FSM	ENSMUSG00000024130.17	ENSMUST00000079594.12	6380	32	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	6.38937724033029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTTTGAGTCATACAT	NA	False	NA	10	True	AATAAA	-17	NA	24571019	24629175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24571226_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ENSMUST00000079601.13	chr16	-	3975	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_9	424.638105724549	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	7486	False	NA	-13	True	AATAAA	-22	NA	22258469	22200058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ENSMUST00000079625.11	chr1	-	3285	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	7.96492310069595	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGATGGTTCTTCCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156501926	156481186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
ENSMUST00000079634.8	chr7	+	1020	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_2	58.9528625259198	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358588	25367457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
ENSMUST00000079642.8	chr17	-	2018	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.43650214343336	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCATTCTCTTGGATAGC	NA	False	NA	NA	False	AATAAA	-16	NA	56185930	56171891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
ENSMUST00000079644.13	chr4	-	1628	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	0	0	0	0	multi-exon	FALSE	canonical	3	9851	junction_2	327.608589257214	8391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151801	119135177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ENSMUST00000079648.12	chr10	-	716	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	73.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTATACATTCTTGG	NA	False	NA	0	True	NA	NA	NA	82459030	82455684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82456052_82458541_82458659_82458798
ENSMUST00000079648.12-0	chr10	-	482	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	59	175	0	0	multi-exon	FALSE	canonical	3	302	junction_2	73.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGGGGGCTCAATGGC	NA	False	NA	0	True	AGTAAA	-20	NA	82458971	82455859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82456052_82458541_82458659_82458798
ENSMUST00000079652.7	chr14	+	3299	2	FSM	ENSMUSG00000063060.7	ENSMUST00000079652.7	3299	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTCTATCCTTTGAAAT	4683	False	NA	NA	False	AATAAA	-16	NA	64181121	64188181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_64181443_64185203
ENSMUST00000079659.12	chr9	-	7630	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	184.18480907976	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTTGGTGTGCTCTGTG	8293	False	NA	-3	True	ATTAAA	-17	NA	95393947	95338950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ENSMUST00000079659.12-0	chr9	-	4129	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	0	3501	0	579	multi-exon	FALSE	canonical	0	0	junction_13	184.18480907976	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8293	False	NA	-18	True	AATAAA	-16	NA	95393947	95342451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ENSMUST00000079681.6	chr11	-	2393	4	FSM	ENSMUSG00000057778.15	ENSMUST00000079681.6	2393	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.02768199119819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCTTTTTTTTCTTTTG	NA	False	NA	0	True	AATAAA	-36	NA	72686682	72668057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686338
ENSMUST00000079684.7	chr10	+	952	1	FSM	ENSMUSG00000050490.8	ENSMUST00000079684.7	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85149351	85150303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85149400_85150300
ENSMUST00000079691.13	chr2	-	1963	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_12	109.121491925285	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTGTTTCATGTAC	8350	False	NA	-2	True	AATAAA	-19	NA	155434730	155405100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ENSMUST00000079693.12	chr7	-	3065	20	FSM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_17	13.3084023611853	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTCTTGATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	35017865	34975960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ENSMUST00000079703.11	chr15	+	1054	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_4	74.7677886674618	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCATGGTCCTGTCTG	NA	False	NA	16	True	AATAAA	-17	NA	59246135	59473533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUST00000079719.11	chr5	+	4982	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_2	196.719272625288	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	119808733	119822626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ENSMUST00000079724.9	chr3	-	1139	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	0	0	0	0	multi-exon	FALSE	canonical	3	1573	junction_5	145.593040126695	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTTTTGTCAAGGTC	7190	False	NA	NA	False	AATAAA	-26	NA	89906004	89902752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
ENSMUST00000079733.7	chr18	+	534	1	FSM	ENSMUSG00000058064.7	ENSMUST00000079733.7	534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACTTGATCCAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	15965850	15966384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_15965800_15966400
ENSMUST00000079735.12	chr15	-	886	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	NA	False	NA	-20	True	AATAAA	-27	NA	34443786	34440650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUST00000079735.12-0	chr15	-	505	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	381	0	0	0	multi-exon	FALSE	canonical	3	3551	junction_4	804.634194836387	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	324	False	NA	-20	True	AATAAA	-27	NA	34443405	34440650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUST00000079746.10	chr5	-	2279	9	FSM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	242.929741643546	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432338	33405066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
ENSMUST00000079749.6	chr6	-	2281	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	0	906	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTACTATCTATTTTACT	NA	False	NA	-5	True	AATAAA	-18	NA	116605960	116601882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_116604095_116605891
ENSMUST00000079758.9	chr9	-	3504	17	FSM	ENSMUSG00000031996.18	ENSMUST00000079758.9	3504	17	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	460.436596476648	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8737	False	NA	-9	True	AATAAA	-19	NA	31123089	31060852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUST00000079761.8	chr3	+	636	1	FSM	ENSMUSG00000059776.8	ENSMUST00000079761.8	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7099	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	58894590	58895226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_58894600_58895200
ENSMUST00000079764.14	chr8	+	682	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	233	7	0	0	multi-exon	FALSE	canonical	3	586	junction_1	13.7679176187089	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCACTGTTGCTTCTCT	NA	False	NA	29	True	TATAAA	-18	NA	85807601	85808961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
ENSMUST00000079773.14	chr10	+	2348	11	FSM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_8	40.2685981876698	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGAATGTTGGCCTGGG	NA	False	NA	9	True	GGGGCT	-36	NA	80458671	80476575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ENSMUST00000079777.12	chr8	+	3394	21	FSM	ENSMUSG00000025812.19	ENSMUST00000079777.12	3394	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_20	36.1848034401183	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCATACCAGACTCAAAC	NA	False	NA	NA	False	NA	NA	NA	127790805	128159306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128159275
ENSMUST00000079780.10	chr16	+	4258	4	FSM	ENSMUSG00000022686.15	ENSMUST00000079780.10	4258	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	15.8954920234218	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTAATGTGAATTTAA	NA	False	NA	7	True	AATAAA	-15	NA	19578983	19591213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19587493
ENSMUST00000079788.7	chr18	-	3190	7	FSM	ENSMUSG00000061013.7	ENSMUST00000079788.7	3650	7	0	460	0	-460	multi-exon	FALSE	canonical	2	10	junction_4	2.3392781412697	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGTGATTAGATAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	7004780	6934977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6937055_6937167_6937202_6992037_6992374_6992777_6992935_7000592_7000753_7002356_7002624_7004621
ENSMUST00000079791.11	chr16	+	4789	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	11.3880419739304	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTGTGGTTTTGACC	2489	False	NA	22	True	AATAAA	-27	NA	32249741	32293888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ENSMUST00000079812.8	chr3	+	10500	34	FSM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	4.33979175423846	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGTGATAGCCTACTG	NA	False	NA	5	True	AATAAA	-17	NA	97920853	98057677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641_98043148_98044590_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
ENSMUST00000079817.8	chr14	-	2676	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	30.6098023515344	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTTTGCATACTATTC	7303	False	NA	-11	True	AATAAA	-12	NA	121616746	121523754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ENSMUST00000079833.6	chr10	+	2604	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_10	23.7006119808005	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCCTTCTCATTGTT	NA	False	NA	13	True	NA	NA	NA	57362491	57389231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
ENSMUST00000079847.8	chr6	-	2518	11	FSM	ENSMUSG00000061838.8	ENSMUST00000079847.8	2518	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	231.816392862972	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCACAGTTCTTGTTTCT	NA	False	NA	-7	True	AATAAA	-22	NA	95669863	95451122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95669467
ENSMUST00000079857.9	chr2	+	3004	15	FSM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	17.0899481137484	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGTTTGTTATGCAGA	NA	False	NA	NA	False	AATAAA	-18	NA	131028877	131040417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUST00000079866.11	chr11	+	2948	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_1	135	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCATGGTTGTCCTTTT	6595	False	NA	21	True	AATAAA	-15	NA	87938543	87942316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87938859_87939315_87939501_87939868
ENSMUST00000079869.13	chr6	+	5886	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCTGTTCTTTAGAAG	NA	False	NA	16	True	AATAAA	-26	NA	54793900	54870485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ENSMUST00000079869.13-0	chr6	+	2436	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	-316	3766	-316	-3766	multi-exon	FALSE	canonical	3	557	junction_1	47.955057084733	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTAATGGTTAAGAATAC	NA	False	NA	14	True	AATAAA	-16	NA	54793584	54866719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ENSMUST00000079881.11	chr6	+	2906	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAACAGGGATCATCACAT	NA	False	NA	NA	False	NA	NA	NA	47812597	47844622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ENSMUST00000079881.11-0	chr6	+	2250	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	31	625	0	-625	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAACTAGAGACATGCTT	NA	False	NA	4	True	CATAAA	-17	NA	47812628	47843997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ENSMUST00000079881.11-1	chr6	+	4862	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	108	-2064	77	2064	multi-exon	FALSE	canonical	3	16	junction_3	4.17612260356422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGAATCTCTTTGCCAT	NA	False	NA	NA	False	AATAAA	-11	NA	47812705	47846686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ENSMUST00000079883.12	chr10	+	1804	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_5	41.6239781322684	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80438713	80451617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUST00000079924.8	chr17	-	4615	12	FSM	ENSMUSG00000062202.15	ENSMUST00000079924.8	2007	12	-93	-2515	0	0	multi-exon	FALSE	canonical	3	6	junction_1	31.2708773237183	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATACAAGTGTTTCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	30795236	30436514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30439119_30439318_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ENSMUST00000079949.13	chr11	-	2588	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	0	0	0	0	multi-exon	FALSE	canonical	3	2776	junction_9	796.06296616144	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	False	NA	-13	True	AATAAA	-23	NA	5049266	5019688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUST00000079960.2	chr14	+	624	1	FSM	ENSMUSG00000059835.2	ENSMUST00000079960.2	624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	59130954	59131578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_59131000_59131600
ENSMUST00000079961.14	chr8	+	2707	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_1	70.7360075664432	2193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941191	95041488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUST00000079970.6	chr7	-	1593	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	148.934720667842	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	False	NA	-7	True	AATAAA	-16	NA	4688067	4663519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
ENSMUST00000079976.10	chr2	-	1884	8	FSM	ENSMUSG00000002105.16	ENSMUST00000079976.10	1884	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	25.0762103702017	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4355	False	NA	0	True	AATAAA	-15	NA	90900574	90892135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896060_90896357_90896472_90900499
ENSMUST00000079978.13	chr4	+	6354	39	FSM	ENSMUSG00000028456.19	ENSMUST00000079978.13	6354	39	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_23	5.54732847284128	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	18	False	NA	12	True	AATAAA	-14	NA	43058968	43264871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249456_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
ENSMUST00000079987.13	chrX	-	2530	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_5	66.9966831683148	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ENSMUST00000079998.13	chr1	-	1398	8	FSM	ENSMUSG00000048495.17	ENSMUST00000079998.13	1398	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	15.7025930524684	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGGTGGAGTGGCCG	NA	False	NA	-18	True	AATAAA	-43	NA	57445833	57427398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440546_57440683_57445542
ENSMUST00000080001.9	chr1	-	1007	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_6	130.826539101718	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGATG	7283	False	NA	0	True	AATAAA	-18	NA	171122597	171116135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
ENSMUST00000080008.13	chr2	+	3068	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_10	19.1619994317457	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5502	False	NA	NA	False	AATAAA	-25	NA	91095318	91107276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUST00000080030.14	chr16	-	2898	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_12	224.149458156465	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTGTAAGTAAAGCTTA	NA	False	NA	NA	False	AATAAA	-15	NA	11072073	11037915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ENSMUST00000080035.11	chrX	-	3327	9	FSM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	17.0399347123162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGATGTGATCTGTCT	NA	False	NA	1	True	NA	NA	NA	70536251	70463665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70494216_70494280_70536127
ENSMUST00000080036.3	chr5	+	10062	67	FSM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	17	3136	0	-3136	multi-exon	FALSE	canonical	3	38	junction_2	19.3734266519568	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCTATGCCCGTGTAA	1573	False	NA	14	True	AGTAAA	-20	NA	34919104	35066742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ENSMUST00000080058.11	chr7	-	2107	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_5	57.8840219749803	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866227	26858082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
ENSMUST00000080065.3	chr2	+	4054	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGACCCAGAGTGAGGAT	NA	False	NA	NA	False	TATAAA	-14	NA	29692645	29707534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ENSMUST00000080065.3-0	chr2	+	2987	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	0	1067	0	-1067	multi-exon	FALSE	canonical	3	138	junction_1	13.3562303397661	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACAGCCTGGCTCCT	NA	False	NA	28	True	AATAAA	-20	NA	29692645	29706467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ENSMUST00000080067.13	chr5	+	4179	23	FSM	ENSMUSG00000028962.15	ENSMUST00000080067.13	4179	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	8.13471288485391	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTGGTCTTGTGTCTTT	NA	False	NA	10	True	AGTAAA	-19	NA	24630229	24645948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ENSMUST00000080085.9	chr5	+	2930	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	61.5435567301728	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7985	False	NA	10	True	AATAAA	-23	NA	3853183	3891359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ENSMUST00000080089.11	chr18	+	2799	21	FSM	ENSMUSG00000024231.16	ENSMUST00000080089.11	2799	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	205.086591468092	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-19	True	NA	72	True	ATTAAA	-28	NA	3383224	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414173_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUST00000080127.12	chr13	+	3052	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATCTTTCTCACTCAAAC	NA	False	NA	NA	False	AATACA	-16	NA	93441306	93540189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ENSMUST00000080127.12-0	chr13	+	5031	10	FSM	ENSMUSG00000007617.19	ENSMUST00000080127.12	3052	10	-697	-1282	0	-166	multi-exon	FALSE	canonical	0	0	junction_6	16.8244384273313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCTCTGGAGAATGTA	NA	False	NA	8	True	AATACA	-20	NA	93440609	93541471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93522852_93522889_93524031_93524189_93528198_93528310_93529535_93529617_93538548
ENSMUST00000080138.13	chr1	+	993	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	63.2525800966956	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTT	NA	False	NA	15	True	NA	NA	NA	155433865	155448034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
ENSMUST00000080141.6	chr15	+	2717	8	FSM	ENSMUSG00000063296.6	ENSMUST00000080141.6	2717	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	14.5195153683108	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGTGTGATGTAGGTT	NA	False	NA	4	True	AATAAA	-17	NA	94527130	94993979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_94527184_94535941_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94972284_94972415_94992239
ENSMUST00000080149.6	chr4	+	1902	8	FSM	ENSMUSG00000063524.14	ENSMUST00000080149.6	1902	8	0	0	0	0	multi-exon	FALSE	canonical	3	2891	junction_5	3495.72395351573	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150327942	150333330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUST00000080152.5	chr8	-	736	1	FSM	ENSMUSG00000063412.5	ENSMUST00000080152.5	736	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2593	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGTATTTTCAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	34578891	34578155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34578200_34578900
ENSMUST00000080164.12	chr5	+	4673	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696109	74759451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUST00000080164.12-0	chr5	+	1974	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	54	2645	0	0	multi-exon	FALSE	canonical	3	373	junction_9	134.520909155417	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696163	74756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUST00000080178.13	chr4	+	3019	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	59.8703105189263	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	NA	False	NA	8	True	AATAAA	-31	NA	123176703	123192625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUST00000080202.12	chr11	-	1727	10	FSM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_9	11.3376897945103	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515840	120509197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ENSMUST00000080217.14	chr17	+	2670	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_5	336.634519917373	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCACACTTTGGCTCAG	NA	False	NA	6	True	AATAAA	-22	NA	85265426	85322119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ENSMUST00000080249.6	chr17	-	2872	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1.11803398874989	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGGCTGTTTCCATT	NA	False	NA	NA	False	NA	NA	NA	22385171	22363339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
ENSMUST00000080281.14	chr14	+	1922	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	8735	junction_1	3197.35060462391	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTTATCTTTTATGTT	NA	False	NA	NA	False	AATAAA	-18	NA	4198628	4201873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ENSMUST00000080299.7	chr15	-	1676	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	11.0453610171873	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCATTTTGTTTACAA	NA	False	NA	-1	True	AATAAA	-20	NA	93234689	93182158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ENSMUST00000080300.9	chr9	+	1280	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	0	0	0	0	multi-exon	FALSE	canonical	3	5317	junction_4	3059.10970504492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGACATTTATTCATAC	NA	False	NA	47	True	NA	NA	NA	44318435	44321724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUST00000080322.8	chr5	-	1885	7	FSM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	161.447015732372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGTCATTGGTATCAACG	NA	False	NA	NA	False	AATAAA	-37	NA	121045584	121034318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ENSMUST00000080322.8-0	chr5	-	1421	7	FSM	ENSMUSG00000052776.11	ENSMUST00000080322.8	1885	7	0	464	0	-464	multi-exon	FALSE	canonical	3	208	junction_1	161.447015732372	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045584	121034782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
ENSMUST00000080348.12	chr7	-	2591	4	FSM	ENSMUSG00000034071.16	ENSMUST00000080348.12	2591	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.86744175568088	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAAAAAAAGTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	12156678	12149079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12151146_12152469_12152594_12155734_12155774_12156316
ENSMUST00000080353.3	chr8	-	2812	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTCCTCCATCCTGA	NA	False	NA	NA	False	AATGAA	-21	NA	48128193	48120212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48122372_48127540
ENSMUST00000080353.3-0	chr8	-	1466	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	0	1346	0	231	multi-exon	FALSE	canonical	3	212	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACCTTAATTTTCTG	NA	False	NA	-13	True	ATTAAA	-16	NA	48128193	48121558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48122372_48127540
ENSMUST00000080356.10	chr7	-	1365	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_6	315.533102683203	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895696	26886431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
ENSMUST00000080359.12	chr5	+	7004	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_1	62.4731053245226	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	3696	False	NA	14	True	AATAAA	-14	NA	77413337	77434279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
ENSMUST00000080371.8	chr15	-	4938	15	FSM	ENSMUSG00000022353.11	ENSMUST00000080371.8	4938	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	26.147150311033	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCAGGTCTCCTTCAGA	2745	False	NA	NA	False	AATAAA	-19	NA	58953838	58813082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58836345_58836358_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ENSMUST00000080386.13	chr9	-	2417	9	FSM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	9.71387538524146	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATGTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	20404038	20380842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681_20403748_20403993
ENSMUST00000080406.7	chr15	-	4036	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.24264068711928	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTCTGTAGTGATGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	76755635	76735808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
ENSMUST00000080411.13	chrX	-	1859	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	198.526236721162	2833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642101	135633701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ENSMUST00000080431.8	chr5	-	3218	18	FSM	ENSMUSG00000006641.13	ENSMUST00000080431.8	3218	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_17	31.4360998487793	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCCTCTGTGTTCCT	NA	False	NA	-1	True	AATAAA	-19	NA	31206268	31193379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31206095
ENSMUST00000080435.9	chr9	-	4364	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_3	135.056366833342	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAAAAAATGGTGATGCT	NA	False	NA	23	True	ATTAAA	-9	NA	108141014	108083142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
ENSMUST00000080437.13	chr7	-	5004	23	FSM	ENSMUSG00000035901.15	ENSMUST00000080437.13	5004	23	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	18.0282148014056	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559677	109492986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ENSMUST00000080440.14	chr14	-	3604	20	FSM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	9.18507762457831	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCATTGTGTTATT	NA	False	NA	-8	True	AATAAA	-10	NA	20844098	20784950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUST00000080443.8	chr8	-	456	1	FSM	ENSMUSG00000057657.5	ENSMUST00000080443.8	456	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTCTGGGCCTTTGCT	NA	False	NA	-69	True	AAGAAA	-1	NA	107989880	107989424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107989400_107989900
ENSMUST00000080492.7	chr17	+	383	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	0	0	0	0	multi-exon	FALSE	canonical	3	5436	junction_1	2487.77200634535	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGTGTATGTGTGA	NA	False	NA	-1	True	AATAAA	-12	NA	56920415	56921243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
ENSMUST00000080514.9	chr9	+	1423	1	FSM	ENSMUSG00000062309.9	ENSMUST00000080514.9	1423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	774	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCAGTTTTGTTC	NA	False	NA	12	True	AATAAA	-17	NA	57411308	57412731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57411300_57412700
ENSMUST00000080517.14	chr4	+	2116	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	10.0079968025574	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTCTCTGTGCAA	NA	False	NA	11	True	AATAAA	-15	NA	10874497	10899421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
ENSMUST00000080536.8	chr8	-	3793	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	0	0	0	0	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTTTTGACTTCTTT	NA	False	NA	NA	False	AATACA	-13	NA	80438369	80410090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUST00000080536.8-0	chr8	-	3540	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	70	183	0	-183	multi-exon	FALSE	canonical	3	1167	junction_10	93.0334984503433	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438299	80410273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUST00000080537.14	chr5	-	2268	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	43	1848	0	0	multi-exon	FALSE	canonical	3	1143	junction_4	56.2444663944819	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGGTTATGCTTGTGT	3466	False	NA	-9	True	AATAAA	-13	NA	143513748	143491236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ENSMUST00000080553.9	chr7	-	2135	12	FSM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	32.0206544912746	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTGTCAAGCCATTT	NA	False	NA	-2	True	AATAAA	-29	NA	140907585	140877092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
ENSMUST00000080557.12	chr6	-	3073	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	13.6099078555564	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGCTGCTGACGTT	NA	False	NA	-1	True	AATAAA	-44	NA	124392026	124373775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ENSMUST00000080583.6	chr3	-	2394	12	FSM	ENSMUSG00000028018.16	ENSMUST00000080583.6	2394	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	53.8152640486702	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTTGACTTTATAATCT	NA	False	NA	NA	False	NA	NA	NA	132797794	132688532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797637
ENSMUST00000080622.9	chr15	-	2077	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	3045	junction_2	110	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGGTTTTGCCTGTTT	4906	False	NA	NA	False	NA	NA	NA	81931799	81924725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81926570_81928097_81928219_81931687
ENSMUST00000080622.9-0	chr15	-	1241	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	19	817	0	136	multi-exon	FALSE	canonical	3	3045	junction_2	110	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATATGGCAGCTGTGCC	4925	False	NA	-24	True	AATAAA	-23	NA	81931780	81925542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81926570_81928097_81928219_81931687
ENSMUST00000080664.14	chr1	-	3426	17	FSM	ENSMUSG00000025932.15	ENSMUST00000080664.14	3426	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	12.9897796363141	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGATTACCGTGTCTGG	NA	False	NA	NA	False	AATAAA	-35	NA	14380343	14239889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14374648_14374699_14379869
ENSMUST00000080666.8	chr8	+	2738	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	6.1711295754251	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTCGTGTTTCCTATC	NA	False	NA	9	True	AATAAA	-14	NA	96429690	96441584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
ENSMUST00000080713.5	chrX	+	2507	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_8	49.1840047833705	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTACCTTCTGTATTA	NA	False	NA	20	True	AATAAA	-24	NA	47345738	47371330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUST00000080721.6	chr18	+	3572	3	FSM	ENSMUSG00000058152.9	ENSMUST00000080721.6	3572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTCTCATTTGATGT	NA	False	NA	NA	False	GATAAA	-14	NA	59308721	59544408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_59309557_59312336_59312621_59541955
ENSMUST00000080723.11	chr6	+	3285	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_12	67.9651854701079	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTGTAAATGATTCG	NA	False	NA	NA	False	AATAAA	-27	NA	52690713	52743765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUST00000080732.10	chr5	+	2134	4	FSM	ENSMUSG00000037017.16	ENSMUST00000080732.10	2134	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	59.1626759217517	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGTCTCAGGACTGTT	NA	False	NA	4	True	AATAAA	-13	NA	138115198	138132476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138115251_138123239_138123953_138124715_138124909_138131300
ENSMUST00000080771.10	chr10	+	2844	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	14.3807355707403	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGATACTTGATCTTTAT	NA	False	NA	4	True	AATAAA	-16	NA	41326378	41341570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
ENSMUST00000080797.8	chr8	+	3213	16	FSM	ENSMUSG00000061048.9	ENSMUST00000080797.8	4384	16	0	1171	0	-1171	multi-exon	FALSE	canonical	3	35	junction_1	6.02218122167265	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTAGGGGAGTGGATT	NA	False	NA	8	True	ATTAAA	-22	NA	107237522	107282758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107237639_107237855_107237974_107262039_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
ENSMUST00000080812.14	chr6	-	1824	10	FSM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	0	0	0	0	multi-exon	FALSE	canonical	1	382	junction_8	221.210865270177	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCTAGAGAATTGTTTT	-9	True	NA	-7	True	AATAAA	-18	NA	30391022	30366378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ENSMUST00000080813.5	chr7	-	494	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	0	0	0	0	multi-exon	FALSE	canonical	3	8882	junction_4	1855.19963548401	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80995002	80992480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
ENSMUST00000080817.6	chr7	-	7147	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTATTTCTGATCAGTC	NA	False	NA	-1	True	AGTAAA	-20	NA	99629655	99569460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
ENSMUST00000080817.6-0	chr7	-	4911	6	FSM	ENSMUSG00000058761.6	ENSMUST00000080817.6	7147	6	0	2236	0	-2236	multi-exon	FALSE	canonical	3	16	junction_4	4.83321838943783	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	99629655	99571696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99575691_99576299_99576400_99584368_99584488_99592165_99592313_99604673_99604748_99629178
ENSMUST00000080834.15	chr7	-	2181	7	FSM	ENSMUSG00000098022.8	ENSMUST00000080834.15	2181	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	14.682756326158	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGTTCCACTGTGTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	29772325	29755461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
ENSMUST00000080839.2	chrX	-	1584	9	FSM	ENSMUSG00000058147.2	ENSMUST00000080839.2	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_5	383.166718772651	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72308996	72298145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
ENSMUST00000080853.11	chr11	-	3283	15	FSM	ENSMUSG00000020717.20	ENSMUST00000080853.11	3283	15	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	284.128393297029	1561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	9559	False	NA	-10	True	AATAAA	-18	NA	106606085	106545043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844
ENSMUST00000080856.14	chr13	-	4325	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	115.519794104579	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073466	106930946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ENSMUST00000080859.8	chr13	+	530	1	FSM	ENSMUSG00000099517.3	ENSMUST00000080859.8	530	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATCAGTTTCATTTGT	8933	False	NA	NA	False	AAAAAG	-29	NA	23719591	23720121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_23719600_23720100
ENSMUST00000080860.13	chr10	-	1190	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	8.9977775033616	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTTTCTGTTTAGAA	NA	False	NA	0	True	AATAAA	-21	NA	18110744	18089423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUST00000080866.8	chr13	+	447	1	FSM	ENSMUSG00000062461.8	ENSMUST00000080866.8	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1387	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCACACCGGAGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	99040731	99041178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_99040700_99041200
ENSMUST00000080880.12	chr15	+	3586	15	FSM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	0	1077	0	0	multi-exon	FALSE	canonical	2	3	junction_9	4.17230910471721	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGGTGATCTCTCCC	8114	False	NA	NA	False	AATAAA	-13	NA	6416078	6469109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUST00000080882.11	chr7	-	3621	23	FSM	ENSMUSG00000040907.16	ENSMUST00000080882.11	3621	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_18	15.2038490124504	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTGTGTTATGCTT	NA	False	NA	-1	True	AATATA	-18	NA	24705383	24677591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700584_24705179
ENSMUST00000080884.11	chrX	+	1739	14	FSM	ENSMUSG00000025271.14	ENSMUST00000080884.11	1739	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	7.96961686026425	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149372916	149426874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUST00000080885.12	chr7	+	1837	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	14.613540144522	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCAAGCTGGGTGCTGC	NA	False	NA	NA	False	NA	NA	NA	45354511	45359627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
ENSMUST00000080893.7	chr11	-	1551	8	FSM	ENSMUSG00000035557.10	ENSMUST00000080893.7	1551	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	2.1946130708196	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGGACTGGTGTGTGTG	NA	False	NA	48	True	AATAAA	-16	NA	100151855	100147042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100147323_100148145_100148172_100148258_100148480_100148568_100148695_100149234_100149397_100149998_100150156_100150520_100150604_100151359
ENSMUST00000080898.4	chr10	-	3218	1	FSM	ENSMUSG00000063953.4	ENSMUST00000080898.4	3218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	475	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-38	NA	35587888	35584670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_35584700_35587900
ENSMUST00000080919.12	chr4	-	4378	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_10	137.634443363571	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6674	False	NA	-3	True	AATAAA	-28	NA	126096553	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ENSMUST00000080926.13	chr4	+	2027	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	0	0	0	0	multi-exon	FALSE	canonical	3	2891	junction_9	3966.2265098293	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCATCTCATTTGTG	NA	False	NA	5	True	AATAAA	-22	NA	150321408	150333336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUST00000080929.13	chrX	-	2978	19	FSM	ENSMUSG00000057000.13	ENSMUST00000080929.13	2978	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	17.7173452014588	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134986004	134972847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
ENSMUST00000080933.13	chr4	+	5669	16	FSM	ENSMUSG00000028284.14	ENSMUST00000080933.13	5669	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	45.1522855333912	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACAGTTTACTGAGTTT	-1	True	NA	22	True	NA	NA	NA	31964119	32023467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ENSMUST00000080936.14	chr16	-	3230	17	FSM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_9	64.8068946467118	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540761	17469084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUST00000080949.8	chr6	+	1393	2	FSM	ENSMUSG00000053012.18	ENSMUST00000080949.8	1393	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTGTGTCAGTGC	NA	False	NA	5	True	AATAAA	-17	NA	71259263	71262302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71259302_71260947
ENSMUST00000080975.6	chr10	-	2458	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_9	22.2351605990131	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGGCTCTGTGGGGA	NA	False	NA	-2	True	AATAAA	-16	NA	126956994	126931518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUST00000081026.11	chr1	-	888	4	FSM	ENSMUSG00000060743.13	ENSMUST00000081026.11	888	4	0	0	0	0	multi-exon	TRUE	canonical	1	55	junction_1	1176.16816635869	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACACAGTAGATTCCATC	NA	False	NA	NA	False	AGTAAA	-42	NA	180641112	180630261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_180630768_180637681_180637836_180639363_180639515_180641035
ENSMUST00000081028.13	chr6	+	5545	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	18.3358687176979	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAGTCCCAAGTCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	134012662	134247118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ENSMUST00000081064.12	chrX	+	3227	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_9	42.2862392872416	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTCCGAATTTTTTTT	NA	False	NA	6	True	AATAAA	-17	NA	133208832	133263388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUST00000081079.6	chr19	+	3013	13	FSM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	137	2761	0	-2761	multi-exon	FALSE	canonical	2	4	junction_9	3.63623737154524	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTGTTTTTTGT	2776	False	NA	NA	False	AATAAA	-15	NA	43678247	43719375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428_43716591_43718136
ENSMUST00000081094.6	chr4	+	2023	7	FSM	ENSMUSG00000028836.15	ENSMUST00000081094.6	2023	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	13.4587848221483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAGAGAAAAAGGGGGGA	2584	False	NA	NA	False	NA	NA	NA	134071019	134080497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ENSMUST00000081103.12	chr1	-	1462	7	FSM	ENSMUSG00000026656.16	ENSMUST00000081103.12	1462	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	22.7943706500823	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCTATTTACTTTT	NA	False	NA	NA	False	AGTAAA	-17	NA	170803696	170788126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170788670_170788764_170788803_170793270_170793394_170794014_170794270_170795548_170795804_170797042_170797064_170803469
ENSMUST00000081104.10	chr1	-	897	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	50	6333	-37	270	multi-exon	FALSE	canonical	3	2331	junction_5	176.235070289656	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCTTTGAAAGTTAGA	NA	False	NA	-17	True	AATAAA	-18	NA	135241466	135229283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ENSMUST00000081165.14	chr7	-	2530	13	FSM	ENSMUSG00000037032.17	ENSMUST00000081165.14	2530	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	43.3149800877248	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGTCTTCCTGTGCT	NA	False	NA	-25	True	AATAAA	-14	NA	105223609	105207692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214861_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888
ENSMUST00000081170.9	chr5	-	3786	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGTTTCTTCGTGACTT	NA	False	NA	NA	False	AATAAA	-17	NA	73805133	73790091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ENSMUST00000081170.9-0	chr5	-	2868	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	60	858	60	-858	multi-exon	FALSE	canonical	3	39	junction_5	18.2756668824971	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAACCCTATATTACAAA	NA	False	NA	NA	False	AATAAA	-17	NA	73805073	73790949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ENSMUST00000081202.6	chr2	+	1107	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	136	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	5217	False	NA	30	True	AATAAA	-17	NA	157209513	157238683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157209561_157220968_157221175_157237829
ENSMUST00000081214.12	chr6	-	2682	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_12	11.4653426304081	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCTCTTTCTGGAC	5776	False	NA	-1	True	NA	NA	NA	34887811	34857360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ENSMUST00000081232.9	chr8	+	4298	33	FSM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_7	32.3080872228611	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	11	True	AATAAA	-23	NA	118225029	118361881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ENSMUST00000081241.2	chr11	-	411	1	FSM	ENSMUSG00000091478.3	ENSMUST00000081241.2	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCCTGGGGTCACCCAG	8076	False	NA	NA	False	NA	NA	NA	100252952	100252541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100252500_100253000
ENSMUST00000081288.14	chr6	-	2772	9	FSM	ENSMUSG00000029672.17	ENSMUST00000081288.14	1487	9	77	-1362	0	0	multi-exon	FALSE	canonical	2	7	junction_8	138.299493853015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	18	False	22356183	0	True	ATTAAA	-22	NA	22356165	22306518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22355993
ENSMUST00000081314.11	chr7	-	4598	22	FSM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_6	41.4509518092853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGAAGGCAGCATGGG	NA	False	NA	66	True	NA	NA	NA	80184867	80104740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ENSMUST00000081314.11-0	chr7	-	4499	22	FSM	ENSMUSG00000030528.13	ENSMUST00000081314.11	4598	22	0	99	0	0	multi-exon	FALSE	canonical	3	335	junction_6	41.4509518092853	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184867	80104839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
ENSMUST00000081318.13	chr11	-	3987	33	FSM	ENSMUSG00000023764.19	ENSMUST00000081318.13	3969	33	-56	38	0	0	multi-exon	FALSE	canonical	0	0	junction_15	28.2531628483874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	7979	False	NA	-2	True	AATGAA	-15	NA	3143463	3081887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3093694_3093791_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ENSMUST00000081333.11	chr19	-	1114	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAATGTCTTACACTGTG	NA	False	NA	NA	False	AAGAAA	-45	NA	24257969	24238816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ENSMUST00000081333.11-0	chr19	-	811	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	0	303	0	106	multi-exon	FALSE	canonical	3	359	junction_4	29.2018835008977	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCCCGGACCTGGCT	NA	False	NA	-7	True	AAAAAG	-15	NA	24257969	24239119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ENSMUST00000081335.13	chr2	+	2900	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	7.5	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156681926	156697490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156682159_156686075_156686302_156695048
ENSMUST00000081339.13	chr17	+	2272	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	310	2292	0	0	multi-exon	FALSE	canonical	3	488	junction_12	76.5992747282172	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCGGATGTTCTATAAATT	NA	False	NA	-17	True	NA	NA	NA	32255383	32279547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUST00000081342.7	chr13	-	482	1	FSM	ENSMUSG00000094777.3	ENSMUST00000081342.7	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTGTCTTTTAAAGAAC	NA	False	NA	NA	False	AAAAAG	-19	NA	22017677	22017195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_22017200_22017700
ENSMUST00000081349.9	chr2	+	4235	17	FSM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.19076365356005	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTGTATTGATCTTAA	NA	False	NA	NA	False	NA	NA	NA	113271408	113540200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
ENSMUST00000081381.6	chr8	-	4195	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_22	51.0282088571954	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8141	False	NA	-7	True	AATAAA	-14	NA	120285474	120234894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ENSMUST00000081387.11	chr11	+	947	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	1683	junction_1	206.515536138729	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAAGCTCTGTCTGTCT	NA	False	NA	29	True	AATAAA	-18	NA	117740076	117746558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
ENSMUST00000081440.14	chr6	+	3499	12	FSM	ENSMUSG00000030340.17	ENSMUST00000081440.14	3499	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	2.74539434009845	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGCAGTGCTGGGT	NA	False	NA	NA	False	NA	NA	NA	125298302	125321906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125299338_125307873_125308148_125309055_125309247_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ENSMUST00000081510.4	chr7	+	820	5	FSM	ENSMUSG00000054612.5	ENSMUST00000081510.4	2894	5	0	2074	0	-2074	multi-exon	FALSE	canonical	3	172	junction_1	21.7887585695009	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCTGCCCTTTCTTGT	NA	False	NA	37	True	ATTAAA	-28	NA	136496342	136729921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_136496417_136552996_136553134_136687677_136687839_136723217_136723358_136729613
ENSMUST00000081527.2	chr1	+	1273	1	FSM	ENSMUSG00000060244.2	ENSMUST00000081527.2	1273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACCTTGCCTTTGATG	1407	False	NA	NA	False	AATAAA	-11	NA	171331045	171332318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171331000_171332300
ENSMUST00000081551.14	chr1	+	2547	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	0	0	0	0	multi-exon	TRUE	canonical	3	1526	junction_2	186.842443693696	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACATGTTTTTTGTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	4928036	4968128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUST00000081554.13	chr5	+	1887	11	FSM	ENSMUSG00000029470.16	ENSMUST00000081554.13	1887	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	30.411182153938	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	15	True	ATTAAA	-20	NA	122845646	122867107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUST00000081567.11	chr5	+	4060	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	595.009556603068	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUST00000081582.8	chr13	-	4677	4	FSM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	6.64997911442	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAGGCTGGAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	67508724	67487369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67491722_67493413_67493510_67495906_67496034_67508622
ENSMUST00000081591.7	chr2	+	2111	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_6	95.2257875645245	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	False	NA	28	True	AATAAA	-36	NA	83474778	83494966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUST00000081593.13	chrX	+	1825	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	0	0	0	0	multi-exon	FALSE	canonical	3	3907	junction_10	353.61602056468	4068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCCTGTCATACTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	105230705	105247305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ENSMUST00000081631.10	chr2	-	1894	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	7.25534285888682	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTATTTATTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	109108635	108922641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
ENSMUST00000081635.13	chr6	+	2115	16	FSM	ENSMUSG00000029534.18	ENSMUST00000081635.13	2115	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	7.93473376995095	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGACTGATCAAAAAGT	15	False	NA	NA	False	NA	NA	NA	17694030	17942965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
ENSMUST00000081649.10	chr7	-	655	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	9574	junction_1	0	1983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	False	NA	-12	True	AATAAA	-22	NA	140535900	140534749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140535087_140535582
ENSMUST00000081654.13	chr10	-	5063	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	5935	False	NA	0	True	AATAAA	-20	NA	77002382	76888011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ENSMUST00000081654.13-0	chr10	-	4225	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	0	838	0	0	multi-exon	FALSE	canonical	3	279	junction_22	34.7938605290869	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTTCCTGCCCTTCCTC	5935	False	NA	4	True	AATAAA	-39	NA	77002382	76888849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ENSMUST00000081677.12	chr1	-	896	7	FSM	ENSMUSG00000026035.16	ENSMUST00000081677.12	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	63.3151289626386	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484645	58470155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484490
ENSMUST00000081679.7	chr13	+	354	1	FSM	ENSMUSG00000061669.7	ENSMUST00000081679.7	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCACATTTTTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	116290316	116290670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_116290300_116290700
ENSMUST00000081688.13	chr10	-	4974	22	FSM	ENSMUSG00000020121.16	ENSMUST00000081688.13	7787	22	-510	3323	-510	926	multi-exon	FALSE	canonical	3	28	junction_11	7.39093027569169	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTGCCTTTTGA	NA	False	NA	-4	True	NA	NA	NA	121883730	121620218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121621681_121628090_121628431_121628559_121628695_121630511_121630693_121636729_121636810_121640720_121640946_121643765_121643872_121658941_121659077_121661320_121661399_121661538_121661600_121665131_121665235_121667789_121667818_121675934_121676020_121676669_121676868_121689553_121689656_121691209_121691432_121705621_121705751_121706232_121706416_121732587_121732651_121761720_121761884_121767218_121767415_121883031
ENSMUST00000081702.12	chr15	+	2439	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	6.70175948888899	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTTTGTGAAGTGTATGG	NA	False	NA	9	True	AATAAA	-19	NA	88960215	88971280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUST00000081710.12	chr2	+	2631	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_2	40.1836893389456	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042177	71093647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000081721.13	chr6	-	2787	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	0	0	0	0	multi-exon	TRUE	canonical	3	406	junction_7	166.792654135859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTTAGTATTGCATG	NA	False	NA	NA	False	AATAAA	-26	NA	47571964	47507072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ENSMUST00000081721.13-0	chr6	-	2635	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	-28	180	0	0	multi-exon	FALSE	canonical	3	406	junction_7	166.792654135859	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ENSMUST00000081726.13	chr4	+	2520	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	10	2630	0	0	multi-exon	FALSE	canonical	3	62	junction_15	5.48542101848163	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	28	True	NA	NA	NA	132366366	132449446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUST00000081739.2	chr19	+	3194	1	FSM	ENSMUSG00000064032.3	ENSMUST00000081739.2	3194	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATTAAGGTTATCTTG	NA	False	NA	NA	False	AATAAA	-18	NA	10176552	10179746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10176600_10179700
ENSMUST00000081742.7	chr4	+	2762	6	FSM	ENSMUSG00000065999.14	ENSMUST00000081742.7	2762	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	34.5913283931103	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637795	147669655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_147637884_147646898_147646979_147647371_147647416_147661528_147661587_147665698_147665826_147667290
ENSMUST00000081747.8	chr5	+	2008	4	FSM	ENSMUSG00000060512.8	ENSMUST00000081747.8	2008	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTATATGTGTCTCCC	1785	False	NA	NA	False	ATTAAA	-22	NA	63969705	64056968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_63969939_64033792_64033843_64053772_64053827_64055297
ENSMUST00000081775.12	chr11	-	3005	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	0	1649	0	-881	multi-exon	FALSE	canonical	3	711	junction_4	320.112870719064	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGACTGCGGGTCAGTGC	NA	False	NA	-2	True	AATATA	-13	NA	96720794	96709888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ENSMUST00000081790.15	chr19	-	5792	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	0	0	0	0	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTTTGATACCTGGT	6346	False	NA	1	True	ATTAAA	-28	NA	60569463	60513133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ENSMUST00000081790.15-1	chr19	-	3528	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	70	2194	0	438	multi-exon	FALSE	canonical	2	169	junction_2	23.687747360186	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTCCTGAAAGTA	6416	False	NA	-4	True	AATAAA	-16	NA	60569393	60515327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ENSMUST00000081799.6	chr11	-	4873	24	FSM	ENSMUSG00000038351.15	ENSMUST00000081799.6	4873	24	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	16.1025776095344	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGGCTCTGATGGCT	NA	False	NA	-8	True	AATAAA	-14	NA	74787886	74740091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ENSMUST00000081827.4	chrX	+	1077	9	FSM	ENSMUSG00000067768.13	ENSMUST00000081827.4	1077	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	104.421546507414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	15	True	AATAAA	-15	NA	72258037	72266056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72258064_72258379_72258463_72258846_72258962_72259646_72259716_72261328_72261447_72262291_72262392_72263579_72263679_72265472_72265569_72265685
ENSMUST00000081828.13	chr12	+	2187	12	FSM	ENSMUSG00000057265.14	ENSMUST00000081828.13	2187	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.49931113658824	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCTGATCATTGTTT	4343	False	NA	NA	False	ATTAAA	-13	NA	84455844	84480554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84456030_84457810_84458040_84460037_84460104_84461347_84461492_84466747_84466829_84470206_84470278_84471909_84472055_84473481_84473976_84475116_84475219_84476778_84476854_84476992_84477108_84480074
ENSMUST00000081834.10	chrX	+	3327	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.81534007106456	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATAAAGGTTAACA	NA	False	NA	NA	False	NA	NA	NA	133657343	133662174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
ENSMUST00000081834.10-0	chrX	+	2008	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	0	1319	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.81534007106456	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTAGTCTGTCTTTTGG	NA	False	NA	NA	False	AATAAA	-41	NA	133657343	133660855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
ENSMUST00000081838.7	chr2	-	1187	5	FSM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	253.22754095872	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCATGCTGCCGTGGAC	NA	False	NA	-10	True	ATTAAA	-9	NA	29983647	29980962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983458
ENSMUST00000081840.6	chr6	-	517	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	14202	junction_3	1766.83093575915	2980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATGTTTTTGGTAAC	NA	False	NA	-24	True	AATAAA	-22	NA	115785708	115782465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
ENSMUST00000081848.13	chr3	-	1237	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_9	235.997175124336	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009266	89000894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
ENSMUST00000081849.10	chr6	-	3683	13	FSM	ENSMUSG00000040669.15	ENSMUST00000081849.10	3683	13	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_9	201.860702108052	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTACTGCATTCTGCT	9596	False	NA	-12	True	ATTAAA	-41	NA	122313974	122294689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ENSMUST00000081869.7	chr2	-	3255	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCACCTTCTTTTCTT	8262	False	NA	NA	False	AATAAA	-17	NA	25086898	25082977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25085938_25086603
ENSMUST00000081893.7	chrX	-	3209	13	FSM	ENSMUSG00000037217.16	ENSMUST00000081893.7	3209	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	14.1330483461833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCTGTGCTTCTTGGT	NA	False	NA	-2	True	AATAAA	-17	NA	20787157	20726753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20727849_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ENSMUST00000081894.5	chr11	+	4114	23	FSM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	219.699273237662	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTTTGCATTGCATCGG	243	False	NA	-36	True	AAAAAG	-19	NA	6242604	6306592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6242715_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUST00000081908.8	chr12	-	1023	1	FSM	ENSMUSG00000060499.8	ENSMUST00000081908.8	1023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTAGCTTTGGTTGTTTTG	NA	False	NA	-4	True	ATTAAA	-20	NA	66331175	66330152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_66330200_66331200
ENSMUST00000081914.13	chr5	-	8057	33	FSM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_32	30.9701847548574	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTCCCATAGTGGCTG	NA	False	NA	NA	False	NA	NA	NA	90514087	90376323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ENSMUST00000081932.13	chr2	+	4461	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	0	0	0	0	multi-exon	TRUE	canonical	3	230	junction_10	26.4695873268632	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTGTTTTCTGTAC	987	False	NA	21	True	AATAAA	-21	NA	3285248	3329914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUST00000081933.14	chr16	-	5309	5	FSM	ENSMUSG00000049502.18	ENSMUST00000081933.14	5309	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.25861557047899	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTTTCCCTCATTC	9994	False	NA	6	True	AATAAA	-24	NA	35759521	35746880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_35749739_35751742_35751961_35752645_35754170_35756746_35756998_35759063
ENSMUST00000081940.11	chr8	-	541	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	0	0	0	0	multi-exon	FALSE	canonical	3	1892	junction_3	9741.86690983247	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTGTCTAGAGTGAC	NA	False	NA	-7	True	AATAAA	-25	NA	70963067	70960915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
ENSMUST00000081946.5	chr7	-	1515	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	0	0	0	0	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGTGTGTGGCTCTGT	2656	False	NA	-1	True	NA	NA	NA	28011497	28004940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ENSMUST00000081946.5-0	chr7	-	1207	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	0	308	0	0	multi-exon	FALSE	canonical	3	2125	junction_9	150.487341660354	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2656	False	NA	-2	True	AATAAA	-19	NA	28011497	28005248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ENSMUST00000081956.12	chr6	-	2737	6	FSM	ENSMUSG00000039985.15	ENSMUST00000081956.12	2737	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	848.577303490967	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148846324	148822554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846086
ENSMUST00000081980.7	chr11	+	1920	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGGTTTGCCTGTTGGC	NA	False	NA	10	True	ATTAAA	-21	NA	59839031	59853031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59839305_59851384
ENSMUST00000081980.7-0	chr11	+	838	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	0	1082	0	-1082	multi-exon	FALSE	canonical	3	425	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTGTTTTGAAAGGC	NA	False	NA	11	True	ATTAAA	-17	NA	59839031	59851949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59839305_59851384
ENSMUST00000081987.5	chr14	-	449	1	FSM	ENSMUSG00000060377.5	ENSMUST00000081987.5	449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTATTTACATGTAT	NA	False	NA	-1	True	ATTAAA	-27	NA	99231754	99231305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_99231300_99231800
ENSMUST00000081989.8	chr10	-	2858	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	-539	8694	-539	-8694	multi-exon	FALSE	canonical	3	16	junction_4	4.8	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCCATGGTAACTG	NA	False	NA	NA	False	ATTAAA	-17	NA	31485719	31377882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
ENSMUST00000081993.3	chr15	-	612	1	FSM	ENSMUSG00000057262.3	ENSMUST00000081993.3	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACCATGATATTTGTAA	NA	False	NA	NA	False	NA	NA	NA	52341624	52341012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_52341000_52341600
ENSMUST00000082024.7	chr12	+	5470	15	FSM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	32.6002378856977	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGGTGTCCTTTATTGG	NA	False	NA	NA	False	AATACA	-15	NA	78795765	78887488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ENSMUST00000082026.14	chr4	+	7940	33	FSM	ENSMUSG00000038024.18	ENSMUST00000082026.14	7940	33	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_19	11.8372756050537	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8171	False	NA	NA	False	AATAAA	-16	NA	86666791	86768840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ENSMUST00000082034.13	chrX	-	4170	24	FSM	ENSMUSG00000025665.17	ENSMUST00000082034.13	4170	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	80.9832067354516	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	-7	True	ATTAAA	-30	NA	110396479	110297889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110396365
ENSMUST00000082059.7	chr10	-	6016	28	FSM	ENSMUSG00000018166.9	ENSMUST00000082059.7	6016	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.414470513838	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTGGATTCCTGTC	NA	False	NA	0	True	AATAAA	-21	NA	128425521	128403391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128405764_128405922_128406224_128406804_128406877_128407038_128407228_128407314_128407413_128407513_128407661_128407997_128408074_128408302_128408459_128408627_128408814_128409043_128409143_128409280_128409401_128410207_128410344_128411850_128411905_128412729_128412885_128413072_128413164_128413968_128414102_128414262_128414469_128414870_128414962_128415364_128415439_128417632_128417754_128417858_128417973_128418985_128419128_128419234_128419354_128419505_128419572_128420179_128420306_128420880_128421068_128422008_128422161_128425288
ENSMUST00000082060.10	chr1	+	1687	10	FSM	ENSMUSG00000064246.11	ENSMUST00000082060.10	1687	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.61780219761789	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGTGTGCTATAATTGCG	802	False	NA	NA	False	AATAAA	-13	NA	134110141	134117767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134110291_134110517_134110548_134111234_134111440_134111861_134111919_134112886_134113038_134114242_134114365_134115607_134115732_134116232_134116416_134116934_134117052_134117218
ENSMUST00000082089.14	chrX	+	2562	22	FSM	ENSMUSG00000031060.17	ENSMUST00000082089.14	2562	22	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_8	74.4726889933195	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTTGAAAGCAGTTTC	2870	False	NA	NA	False	NA	NA	NA	20486336	20516923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUST00000082090.15	chr7	-	3806	26	FSM	ENSMUSG00000062444.16	ENSMUST00000082090.15	3806	26	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_25	15.5434873821804	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCACCTTTCCTTC	7640	False	NA	1	True	AATAAA	-17	NA	81143673	81110146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
ENSMUST00000082092.5	chr11	+	345	5	FSM	ENSMUSG00000057322.13	ENSMUST00000082092.5	345	5	0	0	0	0	multi-exon	FALSE	canonical	3	1304	junction_1	7543.63564122102	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559451	114563157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_114559512_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000082094.5	chr6	-	2581	24	FSM	ENSMUSG00000063884.7	ENSMUST00000082094.5	2581	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	208.34992196086	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGTAAGCGTGTAC	3048	False	NA	-3	True	AATAAA	-26	NA	71885734	71857623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ENSMUST00000082120.5	chr8	-	1772	4	FSM	ENSMUSG00000051176.7	ENSMUST00000082120.5	1772	4	0	0	0	0	multi-exon	FALSE	canonical	3	2952	junction_3	637.888356654639	2278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760017	43748103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_43749574_43753664_43753743_43757512_43757597_43759877
ENSMUST00000082121.9	chr5	-	1945	19	FSM	ENSMUSG00000029276.14	ENSMUST00000082121.9	1945	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	65.6557849603935	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCATTATACTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	107745754	107696888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745672
ENSMUST00000082122.14	chr2	+	1020	7	FSM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_1	864.28364685572	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTGGAGAACATGGAGG	NA	False	NA	32	True	AATAAA	-33	NA	125089109	125099668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_125089322_125089683_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUST00000082125.6	chr1	+	3107	7	FSM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	6.54896090146283	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACAAACAAGCACCC	NA	False	NA	NA	False	NA	NA	NA	132243863	132261226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
ENSMUST00000082136.7	chr12	-	1926	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	8.28653526310404	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGTAGTAGTGTCTTC	NA	False	NA	-5	True	AATAAA	-15	NA	77008975	76984047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
ENSMUST00000082152.5	chr11	-	5205	18	FSM	ENSMUSG00000020802.9	ENSMUST00000082152.5	5205	18	0	0	0	0	multi-exon	FALSE	canonical	2	105	junction_3	24.8790847526891	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGGGGGAGTTGGC	7465	False	NA	1	True	ATTAAA	-19	NA	116472273	116428565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ENSMUST00000082177.13	chrX	+	5520	25	FSM	ENSMUSG00000025332.15	ENSMUST00000082177.13	5520	25	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	115.294181396499	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAGAAAAAAAAAAGCAAAA	NA	False	NA	-20	True	AATAAA	-35	NA	151016267	151056768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_151016707_151020628_151020707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ENSMUST00000082223.13	chr5	+	2045	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	0	0	0	0	multi-exon	FALSE	canonical	3	7026	junction_3	385.215126750691	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGCATTCTTAATT	NA	False	NA	24	True	AATAAA	-18	NA	108048367	108056871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUST00000082237.7	chr7	+	3355	2	FSM	ENSMUSG00000057706.8	ENSMUST00000082237.7	3355	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGCTACTTCATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	82516540	82520723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_82517136_82517963
ENSMUST00000082337.13	chr17	+	7335	16	FSM	ENSMUSG00000061607.16	ENSMUST00000082337.13	7335	16	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_5	38.1950549446158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9229	False	NA	15	True	NA	NA	NA	36152406	36170562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ENSMUST00000082365.6	chr15	-	2383	7	FSM	ENSMUSG00000018865.10	ENSMUST00000082365.6	2383	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	29.8105126870818	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989955	83960297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83961784_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ENSMUST00000082389.1	chrM	+	69	1	FSM	ENSMUSG00000064338.1	ENSMUST00000082389.1	69	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATCCTAGCCCTAGCCC	331	False	NA	22	True	AATGAA	-9	NA	1024	1093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_1000_1100
ENSMUST00000082390.1	chrM	+	1582	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGGTGGCAGAGCCAGG	-3	True	NA	34	True	AATAAA	-35	NA	1093	2675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_1100_2700
ENSMUST00000082391.1	chrM	+	75	1	FSM	ENSMUSG00000064340.1	ENSMUST00000082391.1	75	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTCTTTATTAATATCCT	252	False	NA	109	True	NA	NA	NA	2675	2750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_2700_2800
ENSMUST00000082392.1	chrM	+	957	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6636	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATGTCTGATAAAAGAA	-2	True	NA	-17	True	NA	NA	NA	2750	3707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_2800_3700
ENSMUST00000082393.1	chrM	+	69	1	FSM	ENSMUSG00000064342.1	ENSMUST00000082393.1	69	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAATAGGAATTGAACCT	266	False	NA	50	True	AGTAAA	-30	NA	3705	3774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_3700_3800
ENSMUST00000082394.1	chrM	-	71	1	FSM	ENSMUSG00000064343.1	ENSMUST00000082394.1	71	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGAGGGCTTGAACCT	8	True	NA	-21	True	NA	NA	NA	3842	3771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_3800_3800
ENSMUST00000082395.1	chrM	+	69	1	FSM	ENSMUSG00000064344.1	ENSMUST00000082395.1	69	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATCCTATCACCCTTGC	405	False	NA	49	True	TTTAAA	-15	NA	3844	3913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_3800_3900
ENSMUST00000082396.1	chrM	+	1038	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTAGGATATACTAGTC	-3	True	NA	-27	True	NA	NA	NA	3913	4951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_3900_5000
ENSMUST00000082398.1	chrM	-	69	1	FSM	ENSMUSG00000064347.1	ENSMUST00000082398.1	69	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGTTAAACTTGTGTG	10001	False	NA	0	True	AATAGA	-27	NA	5086	5017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_5000_5100
ENSMUST00000082399.1	chrM	-	71	1	FSM	ENSMUSG00000064348.1	ENSMUST00000082399.1	71	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGTCTTAGCTTAATTA	9928	False	NA	68	True	ACTAAA	-31	NA	5159	5088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_5100_5200
ENSMUST00000082400.1	chrM	-	66	1	FSM	ENSMUSG00000064349.1	ENSMUST00000082400.1	66	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCGCCATTTTTTTTTTT	9830	False	NA	-35	True	NA	NA	NA	5257	5191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_5200_5300
ENSMUST00000082401.1	chrM	-	67	1	FSM	ENSMUSG00000064350.1	ENSMUST00000082401.1	67	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCTTAAGGTGATATTC	9761	False	NA	-103	True	TTTAAA	-15	NA	5326	5259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_5300_5300
ENSMUST00000082402.1	chrM	+	1545	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGGAATCGAACCC	1	True	NA	NA	False	AGTAAA	-5	NA	5327	6872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_5300_6900
ENSMUST00000082403.1	chrM	-	69	1	FSM	ENSMUSG00000064352.1	ENSMUST00000082403.1	69	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4660	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTACATAGGTTG	9250	False	NA	NA	False	NA	NA	NA	6938	6869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_6900_6900
ENSMUST00000082404.1	chrM	+	70	1	FSM	ENSMUSG00000064353.1	ENSMUST00000082404.1	70	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCCTACCCATTCCAAC	571	False	NA	NA	False	NA	NA	NA	6941	7011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_6900_7000
ENSMUST00000082405.1	chrM	+	684	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1041	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACTATGAAGCTAAGAG	-1	True	NA	NA	False	ACTAAA	-35	NA	7012	7696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_7000_7700
ENSMUST00000082407.1	chrM	+	204	1	FSM	ENSMUSG00000064356.1	ENSMUST00000082407.1	204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10927	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTCCCAATCGTTGTA	-11	True	NA	NA	False	ATTAAA	-44	NA	7765	7969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_7800_8000
ENSMUST00000082408.1	chrM	+	681	1	FSM	ENSMUSG00000064357.1	ENSMUST00000082408.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	858	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCCACCAAACTCATGCA	150	False	NA	NA	False	AATACA	-4	NA	7926	8607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_7900_8600
ENSMUST00000082409.1	chrM	+	784	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCCTTAGTATAATTAAT	-2	True	NA	NA	False	NA	NA	NA	8606	9390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_8600_9400
ENSMUST00000082412.1	chrM	+	68	1	FSM	ENSMUSG00000064361.1	ENSMUST00000082412.1	68	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCATCTACCTTCTTCA	347	False	NA	NA	False	NA	NA	NA	9807	9875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_9800_9900
ENSMUST00000082414.1	chrM	+	1378	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAATATAGTTTACAAAAA	69	False	NA	13	True	NA	NA	NA	10166	11544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_10200_11500
ENSMUST00000082418.1	chrM	+	1824	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCGATAATAATAAAAATA	-4	True	NA	-12	True	NA	NA	NA	11741	13565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_11700_13600
ENSMUST00000082419.1	chrM	-	519	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	431	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGTATAAGATAATAATT	-3	True	NA	NA	False	NA	NA	NA	14070	13551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_13600_14100
ENSMUST00000082420.1	chrM	-	69	1	FSM	ENSMUSG00000064369.1	ENSMUST00000082420.1	69	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATAATTATATTTTTGT	2049	False	NA	69	True	NA	NA	NA	14139	14070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_14100_14100
ENSMUST00000082421.1	chrM	+	1144	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11328	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTGATAGTATAAACATT	-2	True	NA	12	True	ACTAAA	-12	NA	14144	15288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_14100_15300
ENSMUST00000082422.1	chrM	+	67	1	FSM	ENSMUSG00000064371.1	ENSMUST00000082422.1	67	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGAAGAAGGAGCTACTC	539	False	NA	-56	True	AATGAA	-21	NA	15288	15355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_15300_15400
ENSMUST00000082423.1	chrM	-	67	1	FSM	ENSMUSG00000064372.1	ENSMUST00000082423.1	67	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTGAGAAGAGAAGATC	-12	True	NA	-7	True	NA	NA	NA	15422	15355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_-_15400_15400
ENSMUST00000082428.6	chr7	-	2177	1	FSM	ENSMUSG00000049091.8	ENSMUST00000082428.6	2177	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGCTAATGTTTGGTT	2841	False	NA	-8	True	AATAAA	-19	NA	126873227	126871050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126871000_126873200
ENSMUST00000082429.8	chr9	+	1072	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	0	0	0	0	multi-exon	FALSE	canonical	3	8868	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTCCTGTGTCA	NA	False	NA	18	True	AATAAA	-18	NA	108216252	108217542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108216758_108216975
ENSMUST00000082429.8-0	chr9	+	850	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	222	0	0	0	multi-exon	FALSE	canonical	3	8868	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTCCTGTGTCA	NA	False	NA	18	True	AATAAA	-18	NA	108216474	108217542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108216758_108216975
ENSMUST00000082430.11	chr11	+	1594	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	9.98436277385793	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAGCCTACTTGGAATTT	NA	False	NA	9	True	AGTAAA	-16	NA	54793597	54801203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
ENSMUST00000082431.6	chr12	-	1010	2	FSM	ENSMUSG00000042808.11	ENSMUST00000082431.6	1010	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGGGTCTCTGTCTTC	NA	False	NA	-5	True	AATAAA	-16	NA	76842273	76839110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_76839775_76841927
ENSMUST00000082437.11	chr3	+	1514	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGTCCTTTCGTG	NA	False	NA	28	True	AATAAA	-30	NA	144276186	144303441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUST00000082437.11-0	chr3	+	1226	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	288	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_1	27.3404462289846	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGCTTTGTCCTTTCGTG	NA	False	NA	28	True	AATAAA	-30	NA	144276474	144303441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUST00000082439.6	chr15	+	2383	9	FSM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	3.38193731461717	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTCACTGCCTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	88973286	88984543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
ENSMUST00000082507.3	chr10	+	64	1	FSM	ENSMUSG00000064441.3	ENSMUST00000082507.3	64	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGGCTTGTGGCTGGGC	4500	False	NA	NA	False	AAGAAA	-15	NA	81014783	81014847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81014800_81014800
ENSMUST00000082517.3	chr7	+	184	1	FSM	ENSMUSG00000064451.3	ENSMUST00000082517.3	184	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTGAAAGAGCTTAGT	NA	False	NA	NA	False	NA	NA	NA	109645570	109645754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109645600_109645800
ENSMUST00000082724.3	chr9	-	135	1	FSM	ENSMUSG00000064658.3	ENSMUST00000082724.3	135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAGAAAAAAGAAAAAAAA	617	False	NA	NA	False	AAGAAA	-6	NA	44648244	44648109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44648100_44648200
ENSMUST00000083192.3	chr11	+	70	1	FSM	ENSMUSG00000065126.3	ENSMUST00000083192.3	70	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCGCACCGGCAGCGGGA	4589	False	NA	17	True	NA	NA	NA	106391818	106391888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_106391800_106391900
ENSMUST00000083262.3	chr4	+	73	1	FSM	ENSMUSG00000065196.3	ENSMUST00000083262.3	73	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTCGTCACGGTTATC	NA	False	NA	NA	False	NA	NA	NA	130476944	130477017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130476900_130477000
ENSMUST00000083274.3	chr16	+	139	1	FSM	ENSMUSG00000065208.3	ENSMUST00000083274.3	139	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCGGGGATGTCTAGCT	721	False	NA	-1	True	NA	NA	NA	22930366	22930505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22930400_22930500
ENSMUST00000083285.3	chr7	-	83	1	FSM	ENSMUSG00000065219.3	ENSMUST00000083285.3	83	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCCCTGCTTTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	44776888	44776805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44776800_44776900
ENSMUST00000083353.3	chr2	+	133	1	FSM	ENSMUSG00000065287.3	ENSMUST00000083353.3	133	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGAGAGCTTGGGACC	NA	False	NA	NA	False	NA	NA	NA	130118156	130118289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130118200_130118300
ENSMUST00000083506.3	chr9	+	88	1	FSM	ENSMUSG00000065440.3	ENSMUST00000083506.3	88	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTGCACCAGCTACCAA	NA	False	NA	NA	False	NA	NA	NA	106056038	106056126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106056000_106056100
ENSMUST00000083529.3	chr3	-	80	1	FSM	ENSMUSG00000065463.3	ENSMUST00000083529.3	80	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAAGTACTGAGA	6905	False	NA	NA	False	TATAAA	-33	NA	153617841	153617761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153617800_153617800
ENSMUST00000083767.3	chr6	-	112	1	FSM	ENSMUSG00000065701.3	ENSMUST00000083767.3	112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACTTACATCTCCCCA	NA	False	NA	-2	True	NA	NA	NA	47765114	47765002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47765000_47765100
ENSMUST00000083804.3	chr3	-	81	1	FSM	ENSMUSG00000065738.3	ENSMUST00000083804.3	81	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTTTTACCTAAACT	7419	False	NA	NA	False	NA	NA	NA	153617327	153617246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153617200_153617300
ENSMUST00000083884.3	chr7	-	90	1	FSM	ENSMUSG00000065818.3	ENSMUST00000083884.3	90	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCCGTGCTGGGGATGA	NA	False	NA	NA	False	NA	NA	NA	44775859	44775769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775800_44775900
ENSMUST00000083970.3	chr18	-	70	1	FSM	ENSMUSG00000065904.3	ENSMUST00000083970.3	70	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGAAGGTGCAGTT	NA	False	NA	NA	False	AATAGA	-28	NA	35075766	35075696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35075700_35075800
ENSMUST00000084013.1	chrM	+	297	1	FSM	ENSMUSG00000065947.1	ENSMUST00000084013.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2397	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTCTTCCCTCACTA	-1	True	NA	NA	False	NA	NA	NA	9876	10173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_9900_10200
ENSMUST00000084027.13	chr8	+	5025	18	FSM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	63.8572694769507	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTACTTGACTCACTGCT	NA	False	NA	81	True	NA	NA	NA	26008774	26065734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ENSMUST00000084030.6	chr8	-	7788	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	24.1986856851542	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTGTGTTGTCTTCC	NA	False	NA	0	True	AATAAA	-21	NA	25691558	25644567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
ENSMUST00000084032.6	chr8	-	3834	23	FSM	ENSMUSG00000031555.16	ENSMUST00000084032.6	3834	23	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	30.3693856832314	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACATTTACAAC	NA	False	NA	NA	False	TTTAAA	-30	NA	25506828	25439668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_25441027_25445947_25446016_25452875_25452902_25452954_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ENSMUST00000084035.12	chr8	-	3985	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	31.0462313449736	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCGTCCTCTTTATA	NA	False	NA	NA	False	AATAAA	-35	NA	25506938	25439626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ENSMUST00000084097.12	chr4	+	772	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	318	69	0	0	multi-exon	FALSE	canonical	3	1785	junction_1	303.738191357111	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTAGGCCGACCTAGA	NA	False	NA	27	True	AATAAA	-17	NA	155916125	155917518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
ENSMUST00000084103.10	chr4	-	5309	8	FSM	ENSMUSG00000029050.16	ENSMUST00000084103.10	5309	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	84.700914386795	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGTGCCTGCAGCCCC	NA	False	NA	-21	True	AATAAA	-15	NA	155306992	155238531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008_155306659_155306814
ENSMUST00000084116.13	chr4	+	3722	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_5	39.8725241465621	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	7345	False	NA	NA	False	NA	NA	NA	152123783	152144481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ENSMUST00000084117.13	chr4	-	4571	5	FSM	ENSMUSG00000028980.15	ENSMUST00000084117.13	4571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	29.2489316044193	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAGTTGATAAACAGTG	NA	False	NA	0	True	ATTAAA	-26	NA	150087587	150063931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150087488
ENSMUST00000084124.7	chr4	-	2218	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	0	0	0	0	multi-exon	FALSE	canonical	1	98	junction_7	73.9915066447194	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTTGTTTCTTCTCC	NA	False	NA	-8	True	AATAAA	-16	NA	149251164	149234447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ENSMUST00000084125.10	chr4	-	7477	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	0	0	0	0	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTAGTAGTCATTTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	148711476	148696838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUST00000084125.10-0	chr4	-	2742	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	254	4481	0	0	multi-exon	FALSE	canonical	3	1029	junction_2	35.1146692993114	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUST00000084129.9	chr4	+	1162	10	FSM	ENSMUSG00000029003.12	ENSMUST00000084129.9	1162	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	269.730638385688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGAACATGTGTATCG	NA	False	NA	30	True	AATAAA	-38	NA	148215371	148230156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148215424_148224299_148224478_148225241_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ENSMUST00000084141.6	chr17	-	3686	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_3	11.3880419739304	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCGAACTTGGTTGT	NA	False	NA	-12	True	NA	NA	NA	22064740	22035865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
ENSMUST00000084199.5	chr18	-	442	1	FSM	ENSMUSG00000062962.6	ENSMUST00000084199.5	442	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACGCCGGAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	21210166	21209724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_21209700_21210200
ENSMUST00000084203.11	chr4	-	4136	20	FSM	ENSMUSG00000028917.15	ENSMUST00000084203.11	4136	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	9.89893527949294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTCGCTGACCCTCTT	7311	False	NA	-1	True	AATAAA	-20	NA	141391429	141353044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141364735_141364796_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
ENSMUST00000084207.12	chr8	+	5528	29	FSM	ENSMUSG00000071176.11	ENSMUST00000084207.12	5528	29	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_9	8.00541908296359	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAAGTTGCTTTTTTTCC	NA	False	NA	NA	False	AATAAA	-26	NA	14961662	15051085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ENSMUST00000084219.12	chr4	+	2647	10	FSM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	166.354225660371	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTGATTGGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	136038335	136068174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUST00000084238.5	chr4	-	2887	8	FSM	ENSMUSG00000037553.15	ENSMUST00000084238.5	4580	8	0	1693	0	1677	multi-exon	FALSE	canonical	3	285	junction_4	22.238961949053	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTAGTTTTT	NA	False	NA	-14	True	AATAAA	-21	NA	133360780	133334302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
ENSMUST00000084241.12	chr4	+	5642	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_8	37.0776212829248	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGGTGTCTGTGTGTGT	NA	False	NA	44	True	GATAAA	-22	NA	132857815	132927067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ENSMUST00000084250.11	chr4	-	2285	10	FSM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_9	35.0019399815087	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTTATGCGTGTCC	5439	False	NA	-10	True	AATAAA	-21	NA	132073058	132059229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
ENSMUST00000084253.10	chr4	-	5141	18	FSM	ENSMUSG00000028906.18	ENSMUST00000084253.10	5141	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_17	28.8854077694417	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	AATAAA	-5	NA	131776389	131650739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ENSMUST00000084264.12	chr4	-	4847	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	24.9225962224873	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	8120	False	NA	-10	True	ATTAAA	-17	NA	129534598	129519875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
ENSMUST00000084276.12	chr4	-	3962	4	FSM	ENSMUSG00000061894.16	ENSMUST00000084276.12	3962	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.78888096369861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGTATTTCTTTCTGT	NA	False	NA	2	True	NA	NA	NA	128483755	128477331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_128480638_128481808_128482238_128483244_128483403_128483686
ENSMUST00000084296.10	chr4	-	1626	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_6	123.940846105444	1520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830710	124812257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUST00000084299.6	chr4	+	1397	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_1	39.7138200126858	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTGTTTCCGAATTG	-2	True	NA	13	True	AATAAA	-14	NA	34550936	34566908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ENSMUST00000084319.11	chr4	+	1134	7	FSM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	198.998673920763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266533	118272308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118266584_118268081_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUST00000084354.4	chr4	+	2239	13	FSM	ENSMUSG00000034401.17	ENSMUST00000084354.4	2239	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	28.7691964897643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCCACACTTTAAAGGGA	NA	False	NA	62	True	NA	NA	NA	111577401	111686381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663180_111679937_111680030_111685382
ENSMUST00000084383.10	chrX	+	3172	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_9	72.7799809002085	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCATGTCCTAGTAT	555	False	NA	41	True	AATAAA	-29	NA	20484021	20517140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUST00000084386.6	chr4	-	1695	3	FSM	ENSMUSG00000035201.16	ENSMUST00000084386.6	1695	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACATATGACCAATCTA	NA	False	NA	NA	False	NA	NA	NA	101695336	101692330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_101693139_101694021_101694595_101695022
ENSMUST00000084396.4	chr7	-	564	6	FSM	ENSMUSG00000010751.16	ENSMUST00000084396.4	564	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	55.0330809604551	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTCACAGAGGTAGAGT	NA	False	NA	NA	False	NA	NA	NA	143203389	143192994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143193027_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ENSMUST00000084418.4	chr7	-	1490	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	10.8857705285386	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCCTCTCAGCCTG	NA	False	NA	-34	True	AATAAA	-18	NA	141614802	141562286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
ENSMUST00000084434.11	chr7	+	468	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	261	235	0	0	multi-exon	FALSE	canonical	3	11307	junction_1	1806.73116428538	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2378	False	NA	27	True	AATAAA	-20	NA	141027543	141031263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUST00000084445.4	chr4	-	354	1	FSM	ENSMUSG00000066116.4	ENSMUST00000084445.4	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCACATTTTTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	83423775	83423421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_83423400_83423800
ENSMUST00000084488.5	chr7	+	6807	52	FSM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_42	17.5348283073368	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGACTCCTGGTGGCT	NA	False	NA	2	True	AATAAA	-9	NA	134272415	134775368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ENSMUST00000084497.12	chr7	+	2892	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	19.6273883896967	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATATTTTAGTGTCTGT	NA	False	NA	16	True	AATAAA	-18	NA	132460953	132486840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUST00000084500.8	chr7	-	2152	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGATGTGAATCTATTTA	NA	False	NA	-5	True	AATAAA	-24	NA	132178127	132159206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ENSMUST00000084500.8-0	chr7	-	1952	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	52	148	52	-148	multi-exon	FALSE	canonical	3	402	junction_6	42.9636653837854	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCAACAGAGTATTTTGT	NA	False	NA	-26	True	AATAAA	-18	NA	132178075	132159354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ENSMUST00000084502.7	chr7	+	2218	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCAGGTGTGTTACCT	NA	False	NA	8	True	ATTAAA	-17	NA	131161950	131173621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUST00000084502.7-0	chr7	+	1321	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	169	728	0	0	multi-exon	FALSE	canonical	3	1325	junction_6	52.1422700554033	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTTAAAAGTTGGGT	NA	False	NA	16	True	AATAAA	-11	NA	131162119	131172893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUST00000084512.11	chr8	-	6471	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	23.6550206087418	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGGGTGTGTTGTCTTCC	NA	False	NA	0	True	AATAAA	-21	NA	25691465	25644567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
ENSMUST00000084519.7	chr7	+	4550	29	FSM	ENSMUSG00000042055.14	ENSMUST00000084519.7	4550	29	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_20	18.5519128228804	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTTGAGTCTCTT	NA	False	NA	6	True	AATAAA	-19	NA	129193586	129237462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235454_129236541
ENSMUST00000084524.4	chr4	+	5223	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACAGCTTAGTCTAT	NA	False	NA	NA	False	AATAAA	-18	NA	62327033	62345227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ENSMUST00000084524.4-0	chr4	+	2709	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	0	2514	0	1145	multi-exon	FALSE	canonical	3	246	junction_9	29.7191986640079	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAAAAATCCTAATT	NA	False	NA	32	True	ATTAAA	-20	NA	62327033	62342713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ENSMUST00000084525.12	chr4	-	819	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGACGTCCTTAAAGGT	2664	False	NA	NA	False	AATAAA	-18	NA	62326879	62312819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ENSMUST00000084525.12-0	chr4	-	1578	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	17	-776	0	776	multi-exon	FALSE	canonical	3	361	junction_3	9.67241208569794	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAGACTCTTTATTAT	2681	False	NA	NA	False	AATAAA	-20	NA	62326862	62312043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ENSMUST00000084526.12	chr4	+	3718	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGTCTGTCTACACACT	NA	False	NA	23	True	AATAAA	-23	NA	62278963	62310006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ENSMUST00000084526.12-0	chr4	+	1470	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	0	2248	0	-2248	multi-exon	FALSE	canonical	3	753	junction_3	40.1932830209228	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGACTCAGTACCTTGGT	NA	False	NA	13	True	AATAAA	-16	NA	62278963	62307758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ENSMUST00000084527.10	chr4	-	4264	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_18	17.8933741789013	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTGTTCCTTTTTGGG	6994	False	NA	-1	True	NA	NA	NA	62278707	62218578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ENSMUST00000084530.9	chr4	+	1820	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	15.369522511198	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTTGGTCCGTTTC	NA	False	NA	9	True	AATAAA	-20	NA	62204685	62216648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
ENSMUST00000084535.6	chrX	-	8496	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTGTTTTCTTGTTGT	NA	False	NA	NA	False	AATAAA	-30	NA	94488478	94463923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_94472205_94488263
ENSMUST00000084563.11	chr7	+	1054	3	FSM	ENSMUSG00000106715.4	ENSMUST00000084563.11	1054	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTCTAATTGCTCTTT	NA	False	NA	17	True	AATAAA	-20	NA	127160561	127164442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127160958_127162293_127162465_127163955
ENSMUST00000084564.10	chr7	-	5829	3	FSM	ENSMUSG00000045639.15	ENSMUST00000084564.10	5829	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTACTTCTTATCT	4402	False	NA	0	True	AATAAA	-18	NA	127214444	127206202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127211735_127211838_127211946_127214254
ENSMUST00000084614.5	chr3	-	537	1	FSM	ENSMUSG00000070343.4	ENSMUST00000084614.5	537	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1964	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGATCCAAAAAGCTAAT	NA	False	NA	NA	False	NA	NA	NA	146545102	146544565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_146544600_146545100
ENSMUST00000084621.12	chr4	-	4315	13	FSM	ENSMUSG00000039813.15	ENSMUST00000084621.12	4315	13	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_12	4.63381292481928	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTGGGCTGCCTGA	-14	True	NA	1	True	AATAAA	-15	NA	46650209	46604389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ENSMUST00000084664.11	chr7	-	4312	25	FSM	ENSMUSG00000045659.19	ENSMUST00000084664.11	4312	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	74.8090160935758	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAAGAAAAAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	115789076	115723352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774963_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115789010
ENSMUST00000084695.11	chr4	+	1595	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	0	0	0	0	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	-11	True	NA	32	True	AATAAA	-33	NA	41755227	41758695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ENSMUST00000084695.11-0	chr4	+	1302	11	FSM	ENSMUSG00000036073.19	ENSMUST00000084695.12	1595	11	293	0	-237	0	multi-exon	FALSE	canonical	2	236	junction_6	31.3438989278615	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	0	True	NA	32	True	AATAAA	-33	NA	41755520	41758695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ENSMUST00000084705.13	chr7	+	2543	12	FSM	ENSMUSG00000055320.19	ENSMUST00000084705.13	2543	12	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_1	4.44804720826366	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAGAAAAGATGGCTC	NA	False	NA	NA	False	TTTAAA	-44	NA	112278524	112498666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ENSMUST00000084721.8	chr13	+	1222	3	FSM	ENSMUSG00000078941.10	ENSMUST00000084721.8	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	100787850	100792567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_100787954_100790698_100790792_100791541
ENSMUST00000084727.11	chr7	+	3003	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	55.3423285861133	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	False	NA	12	True	AATACA	-10	NA	109660916	109694594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUST00000084731.5	chr7	+	4763	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	191.489515052391	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7198	False	NA	NA	False	AAGAAA	-2	NA	109617480	109655816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ENSMUST00000084733.7	chr9	+	1041	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACTGGATATGGAATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	122850390	122852552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122850636_122851230_122851378_122851903
ENSMUST00000084743.7	chr9	-	2365	2	FSM	ENSMUSG00000066235.8	ENSMUST00000084743.7	2365	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGTCTTTTTCTGATGC	NA	False	NA	-3	True	ATTAAA	-18	NA	121825091	121810674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_121812890_121824941
ENSMUST00000084749.8	chr4	-	4573	16	FSM	ENSMUSG00000040183.14	ENSMUST00000084749.8	4573	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	7.75857948052062	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	18	False	NA	-7	True	ATTAAA	-16	NA	32923505	32804034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32923296
ENSMUST00000084750.8	chr4	-	4444	16	FSM	ENSMUSG00000040183.14	ENSMUST00000084750.8	4444	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	6.1369554521947	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTATTCTACTTTTTA	13	True	NA	-7	True	ATTAAA	-16	NA	32950826	32804034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32950746
ENSMUST00000084763.5	chr7	+	3272	11	FSM	ENSMUSG00000016626.11	ENSMUST00000084763.5	3272	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	2.19089023002066	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGCCACAAGTGTCAT	NA	False	NA	NA	False	AGTAAA	-11	NA	106766196	106797300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_106766289_106780365_106780453_106780877_106782460_106783934_106784109_106785754_106785920_106789229_106789401_106790265_106790437_106791652_106791824_106795248_106795420_106796353_106796525_106796983
ENSMUST00000084770.5	chr4	-	4785	3	FSM	ENSMUSG00000055373.9	ENSMUST00000084770.5	12134	3	291	7058	0	2508	multi-exon	FALSE	canonical	3	36	junction_2	8.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTACTCAGATTTTCTT	-29	True	NA	NA	False	AATAAA	-21	NA	25799855	25616389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_25620821_25709027_25709115_25799588
ENSMUST00000084771.3	chr10	+	1559	7	FSM	ENSMUSG00000071072.13	ENSMUST00000084771.3	1559	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	1337.80347543609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGATTTCTTGG	903	False	NA	-1	True	TTTAAA	-22	NA	127894879	127912847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127910090_127910154_127911206_127911232_127911935
ENSMUST00000084820.6	chr9	+	7583	24	FSM	ENSMUSG00000038708.11	ENSMUST00000084820.6	7583	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_12	49.6666772391441	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335334	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ENSMUST00000084828.5	chr12	+	4684	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	40.0130559050061	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTTGTTTAAAAGTGAC	NA	False	NA	NA	False	TATAAA	-30	NA	116369021	116425231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ENSMUST00000084846.12	chr4	-	3740	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_11	319.821966045795	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUST00000084881.5	chr9	-	1674	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_5	47.5280618862864	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTCTCCGTCCTTCCAG	NA	False	NA	NA	False	GATAAA	-20	NA	114219743	114204201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ENSMUST00000084882.9	chr12	+	1439	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	5622	False	NA	30	True	AATAAA	-23	NA	113103855	113109126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ENSMUST00000084882.9-0	chr12	+	1103	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	336	0	0	0	multi-exon	FALSE	canonical	3	743	junction_5	14.1745076340121	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTGTCGTGTGTGTG	5958	False	NA	30	True	AATAAA	-23	NA	113104191	113109126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ENSMUST00000084885.12	chr9	+	3850	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	91.3275141660497	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	1302	False	NA	20	True	AATAAA	-20	NA	113760001	113806267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ENSMUST00000084891.5	chr12	+	5480	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	15.2637802253402	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGGGGCCATGCGG	1379	False	NA	28	True	AATAAA	-40	NA	112978127	113038021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUST00000084891.5-1	chr12	+	3320	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	-103	2263	-103	0	multi-exon	TRUE	canonical	3	64	junction_11	15.2637802253402	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCTTTCTAATGCTC	1276	False	NA	14	True	AATAAA	-30	NA	112978024	113035758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUST00000084892.12	chr4	-	6754	19	FSM	ENSMUSG00000045205.17	ENSMUST00000084892.12	6754	19	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_13	8.17176711475418	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTCGTACTTGATCTT	-10	True	NA	-9	True	AATAAA	-24	NA	11322137	11261314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ENSMUST00000084915.11	chr4	-	2884	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	124.875606744325	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	NA	False	NA	-4	True	AATAAA	-17	NA	9669162	9575266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUST00000084935.11	chr7	+	2329	14	FSM	ENSMUSG00000030729.18	ENSMUST00000084935.11	8834	14	232	6273	-50	-4815	multi-exon	TRUE	canonical	2	3	junction_8	2.32557176274323	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGATATGAGTCAAAT	NA	False	NA	NA	False	AATAGA	-23	NA	99876832	99921801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_99877242_99899498_99899667_99901391_99901499_99902439_99902525_99904740_99904825_99909090_99909285_99910806_99910997_99911272_99911371_99912117_99912296_99915871_99915966_99916692_99916823_99917323_99917514_99919534_99919669_99921533
ENSMUST00000084937.11	chr7	+	2092	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	279.849612391291	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	False	NA	20	True	ATTAAA	-20	NA	43896210	43901739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000084947.10	chr12	+	2433	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	1	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644538	111650336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111645397_111647235_111647503_111649028
ENSMUST00000084949.3	chr4	-	6543	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGCTGTGTTGGTGTTT	-27	True	NA	-4	True	AATAAA	-22	NA	4793355	4762483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ENSMUST00000084949.3-0	chr4	-	4993	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	0	1550	0	-1550	multi-exon	FALSE	canonical	3	157	junction_3	6.90561365846657	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTTCTCTAATTCTCT	-27	True	NA	-11	True	AATAAA	-16	NA	4793355	4764033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ENSMUST00000084953.13	chr12	+	3365	17	FSM	ENSMUSG00000007411.17	ENSMUST00000084953.13	3365	17	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_15	118.351634441608	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	740	False	NA	NA	False	ATTAAA	-21	NA	111540960	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111619823_111619869_111621703
ENSMUST00000084968.14	chr12	+	5684	12	FSM	ENSMUSG00000037896.18	ENSMUST00000084968.14	5684	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	9.8114455005324	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCGCTATGTCCCGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	111005784	111082335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ENSMUST00000084985.11	chr12	+	4225	14	FSM	ENSMUSG00000017843.15	ENSMUST00000084985.11	1847	14	-120	-2258	0	0	multi-exon	FALSE	canonical	3	17	junction_13	338.054020402153	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	4921	False	NA	3	True	AATAAA	-17	NA	110452172	110549496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
ENSMUST00000085026.12	chr12	+	3711	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTATTTGTTTG	NA	False	NA	17	True	NA	NA	NA	105976550	106043685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ENSMUST00000085026.12-0	chr12	+	1514	14	FSM	ENSMUSG00000021115.16	ENSMUST00000085026.12	3711	14	-9	2206	0	0	multi-exon	FALSE	canonical	3	514	junction_12	169.729126349489	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	False	NA	NA	False	ATTAAA	-42	NA	105976541	106041479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
ENSMUST00000085044.14	chr9	+	4520	27	FSM	ENSMUSG00000006676.17	ENSMUST00000085044.14	4520	27	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	64.3458319914706	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTGACTGATCCACAA	NA	False	NA	11	True	AATAAA	-15	NA	108368043	108379516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ENSMUST00000085060.3	chr9	+	2543	1	FSM	ENSMUSG00000032593.6	ENSMUST00000085060.3	2543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTTCCCAGATGGA	1637	False	NA	NA	False	AATAAA	-18	NA	107930357	107932900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107930400_107932900
ENSMUST00000085077.5	chr7	-	6151	19	FSM	ENSMUSG00000015709.10	ENSMUST00000085077.5	6151	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.23123173644702	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCCTTGGACTGGCT	NA	False	NA	2	True	AATAAA	-20	NA	84059327	83895485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_83899363_83900573_83900711_83911600_83911752_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549_83996764_84003727_84003776_84010761_84010877_84059062
ENSMUST00000085096.10	chr12	-	6313	30	FSM	ENSMUSG00000021182.17	ENSMUST00000085096.10	6313	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	27.3819159708636	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGAGTTCCCAC	NA	False	NA	NA	False	NA	NA	NA	100995242	100878958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913518_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ENSMUST00000085108.8	chr12	-	2611	6	FSM	ENSMUSG00000033713.13	ENSMUST00000085108.8	2611	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	34.9262079247089	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAGAAAAACAGAACAG	4177	False	NA	NA	False	AAAAAG	-33	NA	99416333	99161352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99416283
ENSMUST00000085109.10	chr12	+	2272	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	3.54347470962493	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTTTTCACTTTTCA	NA	False	NA	NA	False	AATAAA	-10	NA	98886832	98949491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
ENSMUST00000085116.4	chr12	-	5696	19	FSM	ENSMUSG00000021009.16	ENSMUST00000085116.4	5696	19	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_18	9.45636502606434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGTGTTCCTGTTGCA	NA	False	NA	0	True	ATTAAA	-15	NA	98700904	98643000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98700728
ENSMUST00000085133.13	chr9	-	4665	27	FSM	ENSMUSG00000032570.18	ENSMUST00000085133.13	4665	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	87.8100845389957	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	False	NA	-2	True	AATAAA	-20	NA	105398456	105288561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105398238
ENSMUST00000085163.4	chr13	+	300	1	FSM	ENSMUSG00000066407.4	ENSMUST00000085163.4	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2827	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTTTCTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	73465962	73466262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_73466000_73466300
ENSMUST00000085177.5	chr9	+	4889	2	FSM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTAGAATTTTTTTTCCG	NA	False	NA	NA	False	AGTAAA	-14	NA	100956814	100981999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_100957474_100977769
ENSMUST00000085181.5	chr4	-	955	4	FSM	ENSMUSG00000040025.18	ENSMUST00000085181.5	955	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	419.072255769283	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTTCTTGTGTATTA	NA	False	NA	NA	False	AGTAAA	-21	NA	131939402	131913600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131914259_131938062_131938143_131938742_131938768_131939210
ENSMUST00000085192.7	chr12	-	3399	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	0	0	0	0	multi-exon	FALSE	canonical	2	131	junction_11	16.2917613413438	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497777	84477490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ENSMUST00000085206.11	chr9	-	5227	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993210	96957013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ENSMUST00000085206.11-0	chr9	-	2431	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	0	2796	0	1160	multi-exon	FALSE	canonical	3	263	junction_3	363.380272197353	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGCAATGGCTTTC	NA	False	NA	-14	True	ATTAAA	-37	NA	96993210	96959809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ENSMUST00000085215.11	chr12	-	3468	13	FSM	ENSMUSG00000021224.16	ENSMUST00000085215.11	3468	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	37.2680791324455	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	NA	False	NA	-37	True	AATAAA	-14	NA	83968618	83840844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_83842929_83843970_83844118_83846281_83846298_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ENSMUST00000085217.12	chr9	+	2815	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	8.15843122174846	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCCTACTTCACAG	NA	False	NA	NA	False	CATAAA	-13	NA	96001414	96062243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ENSMUST00000085245.7	chr12	+	5201	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATGTGAGTGGCTCTTT	NA	False	NA	12	True	ATTAAA	-17	NA	80691012	80730111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ENSMUST00000085245.7-0	chr12	+	3184	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	-13	2030	0	1432	multi-exon	FALSE	canonical	3	88	junction_2	10.9455724179028	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTGTATTTATATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	80690999	80728081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ENSMUST00000085248.12	chr9	-	1882	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_10	2408.59367105002	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGCCGTGTTATCAA	NA	False	NA	NA	False	AATAAA	-24	NA	89996768	89973717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ENSMUST00000085254.7	chr12	-	1673	7	FSM	ENSMUSG00000066441.15	ENSMUST00000085254.7	1673	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	44.1263967358416	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCTGTTTCTCAGCCTA	NA	False	NA	-3	True	AATAAA	-18	NA	79237735	79222324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79237542
ENSMUST00000085255.11	chr7	+	4195	31	FSM	ENSMUSG00000030447.16	ENSMUST00000085255.11	4195	31	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	147.013453654948	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTACCAGTTTCTTTTAA	NA	False	NA	5	True	NA	NA	NA	55491953	55580246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUST00000085256.8	chr9	+	816	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_1	109	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGAATATTAATGCAA	NA	False	NA	NA	False	AATAAA	-35	NA	89093209	89122293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_89093365_89097261_89097524_89121894
ENSMUST00000085311.13	chr9	-	2155	13	FSM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	0	0	0	0	multi-exon	FALSE	non_canonical	2	34	junction_11	11.6437274482396	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGATGGCCTTTAA	NA	False	NA	3	True	AATAAA	-31	NA	78015938	77988780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ENSMUST00000085340.7	chr18	+	555	1	FSM	ENSMUSG00000066475.7	ENSMUST00000085340.7	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATAAAATAAATGC	NA	False	NA	NA	False	AAGAAA	-34	NA	38377880	38378435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_38377900_38378400
ENSMUST00000085350.11	chr9	+	2969	9	FSM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	47.1963981676568	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTCTCAAGTCTGGCG	NA	False	NA	NA	False	AATAAA	-23	NA	72892886	72923282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613
ENSMUST00000085358.12	chr9	-	3909	11	FSM	ENSMUSG00000090626.10	ENSMUST00000085358.12	3904	11	-5	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	28.6581576518799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTAATGTGTTTAATTTT	7876	False	NA	NA	False	AATAAA	-23	NA	72399243	72365853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020
ENSMUST00000085365.6	chr7	-	801	1	FSM	ENSMUSG00000062758.7	ENSMUST00000085365.6	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	850	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACACTGAATTTTCTGT	NA	False	NA	NA	False	AAAAAG	-36	NA	131216717	131215916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_131215900_131216700
ENSMUST00000085368.4	chr12	+	882	1	FSM	ENSMUSG00000066487.4	ENSMUST00000085368.4	882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTTTTTATATGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	59127804	59128686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_59127800_59128700
ENSMUST00000085375.13	chr7	+	1185	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	85.8518678298646	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	False	NA	20	True	AATAAA	-20	NA	44803737	44809488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUST00000085383.11	chr7	-	4293	11	FSM	ENSMUSG00000038406.18	ENSMUST00000085383.11	4293	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	46.9408137978029	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	5054	False	NA	-6	True	ATTAAA	-17	NA	44665787	44652371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44665503
ENSMUST00000085385.7	chr12	-	7901	41	FSM	ENSMUSG00000021027.18	ENSMUST00000085385.7	7901	41	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_22	22.9185514376454	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCCATGATCGTAT	9947	False	NA	-10	True	AATAAA	-25	NA	55867952	55649683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ENSMUST00000085393.13	chr9	+	2328	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_9	27.3933397330153	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896785	69915537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUST00000085399.13	chr7	-	3442	24	FSM	ENSMUSG00000060279.15	ENSMUST00000085399.13	3442	24	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	223.313676494837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578914	44549797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44552885_44552952_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ENSMUST00000085412.7	chr12	+	2456	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.34608870919344	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTATTTATTAACACTAG	NA	False	NA	NA	False	AATAAA	-17	NA	51640139	51652544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
ENSMUST00000085420.12	chr9	+	3639	10	FSM	ENSMUSG00000032373.16	ENSMUST00000085420.12	3639	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	4.2687494916219	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTGATTTTTTCCCCC	NA	False	NA	NA	False	AATAAA	-14	NA	66621011	66674124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_66621216_66624841_66624863_66653751_66653932_66654857_66655004_66658211_66658308_66659224_66659289_66659568_66659727_66660976_66661104_66670528_66670617_66671569
ENSMUST00000085461.4	chr7	+	855	5	FSM	ENSMUSG00000064023.5	ENSMUST00000085461.4	1322	5	467	0	448	0	multi-exon	FALSE	canonical	3	33	junction_4	3.90512483795333	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCGACTGTGCTTTGACC	3344	False	NA	28	True	AATAAA	-18	NA	43447467	43453246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43447557_43448047_43448208_43448488_43448752_43451503_43451638_43453037
ENSMUST00000085513.6	chr7	-	3441	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	-5	True	ATTAAA	-24	NA	37718967	37659416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ENSMUST00000085513.6-0	chr7	-	2527	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	-24	938	0	-288	multi-exon	FALSE	canonical	3	853	junction_5	45.4049556766659	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGAACTTCCTGGTTT	NA	False	NA	0	True	AGTAAA	-27	NA	37718991	37660354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ENSMUST00000085519.13	chr9	+	2113	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTCCTTTGAGTCTT	NA	False	NA	25	True	AATAAA	-25	NA	62248610	62286094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ENSMUST00000085519.13-0	chr9	+	1082	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	0	1031	0	0	multi-exon	FALSE	canonical	3	492	junction_5	26.6546848081575	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGGAGGGGAGGAATAAAA	NA	False	NA	-29	True	NA	NA	NA	62248610	62285063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ENSMUST00000085546.13	chr5	-	2838	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	0	0	0	0	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACGTCTTTGTAACTTT	6764	False	NA	NA	False	TTTAAA	-18	NA	148989850	148983511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUST00000085546.13-0	chr5	-	2313	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	0	525	0	-525	multi-exon	FALSE	canonical	3	5649	junction_4	1171.94720444225	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGTTAAATGACTTTCA	6764	False	NA	-7	True	AATAAA	-24	NA	148989850	148984036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUST00000085554.5	chr5	+	1009	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAATTATTGGGAAATG	NA	False	NA	NA	False	NA	NA	NA	148239983	148250810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
ENSMUST00000085554.5-0	chr5	+	3074	4	FSM	ENSMUSG00000029651.17	ENSMUST00000085554.5	1009	4	0	-2065	0	0	multi-exon	FALSE	canonical	3	48	junction_1	28.87136220471	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGGTCTGTGTTAAC	NA	False	NA	13	True	ATTAAA	-26	NA	148239983	148252875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_148240080_148240292_148240413_148243439_148243538_148250115
ENSMUST00000085555.7	chr1	-	2685	12	FSM	ENSMUSG00000016181.11	ENSMUST00000085555.7	5570	12	0	2885	0	466	multi-exon	FALSE	canonical	3	56	junction_4	6.18449140061635	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTATGCGTATTG	NA	False	NA	-17	True	NA	NA	NA	192812580	192789594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ENSMUST00000085556.4	chr7	+	3046	16	FSM	ENSMUSG00000030494.14	ENSMUST00000085556.4	3046	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	29.2524642836577	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTCTTTTTTCTTTTG	NA	False	NA	22	True	AATAAA	-22	NA	35033754	35091710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090736_35091033
ENSMUST00000085585.12	chr7	-	2944	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_4	54.3963234051714	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAACTATTTTGGTT	NA	False	NA	-11	True	AATAAA	-33	NA	34089112	34044070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ENSMUST00000085592.6	chr7	-	5798	13	FSM	ENSMUSG00000066571.14	ENSMUST00000085592.6	5798	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_10	17.4664360671801	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATACTCTGTATCTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	33985024	33936138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126
ENSMUST00000085614.6	chr5	-	4327	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	37.7638633484446	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACTTTTTTTTCCTTTT	1122	False	NA	NA	False	NA	NA	NA	146731816	146671618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ENSMUST00000085635.6	chr1	-	4040	10	FSM	ENSMUSG00000066595.10	ENSMUST00000085635.6	4040	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	7.45521608765167	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGTCCTTTAAAAA	NA	False	NA	1	True	AATAAA	-20	NA	190758355	190738043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190753272_190753454_190757573
ENSMUST00000085636.13	chr7	-	2543	19	FSM	ENSMUSG00000001248.16	ENSMUST00000085636.13	2543	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	93.4841374277865	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5754	False	NA	-1	True	AATAAA	-15	NA	30850439	30829551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30834003_30834006_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
ENSMUST00000085651.12	chr9	+	2024	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_5	36.1815151813233	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	537	False	NA	NA	False	AATAAA	-16	NA	58489574	58560161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ENSMUST00000085658.5	chr9	+	2139	3	FSM	ENSMUSG00000066607.6	ENSMUST00000085658.5	2139	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACACAGTCATAATA	NA	False	NA	NA	False	NA	NA	NA	58395885	58407025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_58396523_58396951_58397676_58406247
ENSMUST00000085671.10	chr5	+	3794	6	FSM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	9.08625335328044	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGAGGTTTCTCTC	937	False	NA	10	True	ATTAAA	-15	NA	145141371	145158560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
ENSMUST00000085673.11	chr9	-	4481	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	2151	False	NA	-1	True	AGTAAA	-23	NA	58157069	58125358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000085673.11-0	chr9	-	4015	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	0	466	0	0	multi-exon	FALSE	canonical	3	249	junction_4	53.0057485090061	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000085678.8	chr1	-	3706	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_13	20.9446461104513	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740037	188703291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ENSMUST00000085679.13	chr5	+	3105	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	0	0	0	0	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCATGTCTTGTCTGGGT	8032	False	NA	NA	False	AATATA	-15	NA	145051024	145066509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUST00000085679.13-0	chr5	+	1511	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	86	1508	0	103	multi-exon	FALSE	canonical	3	1600	junction_4	137.116333413962	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGTGGCACTCGCTTTT	8118	False	NA	34	True	AATAAA	-20	NA	145051110	145065001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUST00000085684.11	chr5	-	5343	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	38.3797272034027	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTCCTTTTTCCTTCCT	NA	False	NA	-14	True	AATAAA	-13	NA	144902657	144813311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ENSMUST00000085701.7	chr5	-	5106	25	FSM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_17	9.68236871271121	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGACAAGATTTTTATT	NA	False	NA	-6	True	AATAAA	-17	NA	144160433	144131259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ENSMUST00000085709.6	chr9	-	1464	7	FSM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	-28	1308	0	0	multi-exon	FALSE	canonical	3	27	junction_2	42.49607825043	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347407	57321243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ENSMUST00000085715.7	chr7	-	3886	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_16	12.0219525764328	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCCGTTTGTCCTTTC	NA	False	NA	NA	False	AATGAA	-14	NA	19192746	19158699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ENSMUST00000085715.7-0	chr7	-	3168	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	26	692	0	0	multi-exon	FALSE	canonical	3	72	junction_16	12.0219525764328	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGACCTCCTCCCTGG	NA	False	NA	-7	True	AATAAA	-17	NA	19192720	19159391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ENSMUST00000085720.3	chr12	+	315	1	FSM	ENSMUSG00000066629.3	ENSMUST00000085720.3	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAACCCTCCCCCAATA	NA	False	NA	NA	False	NA	NA	NA	12962022	12962337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_12962000_12962300
ENSMUST00000085724.5	chr1	+	2983	8	FSM	ENSMUSG00000038576.16	ENSMUST00000085724.5	2983	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	5.19418827505653	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGTTTGAAGTGTGACT	NA	False	NA	NA	False	ATTAAA	-16	NA	182592459	182724156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_182592754_182660627_182660841_182681521_182681696_182685986_182686176_182714904_182715097_182716332_182716478_182719447_182719831_182722763
ENSMUST00000085735.4	chr12	-	1255	1	FSM	ENSMUSG00000066632.4	ENSMUST00000085735.4	1255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTCCTGCCTTTGGT	NA	False	NA	NA	False	NA	NA	NA	10950240	10948985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_10949000_10950200
ENSMUST00000085741.2	chr12	+	786	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	0	214	0	-214	multi-exon	FALSE	canonical	3	121	junction_2	13	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTTCTATTCCCAACT	NA	False	NA	14	True	AGTAAA	-16	NA	9079996	9086180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_9080197_9084921_9085089_9085761
ENSMUST00000085792.5	chr7	-	2764	5	FSM	ENSMUSG00000050855.17	ENSMUST00000085792.5	2764	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	10.6624340560681	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3444	False	NA	-4	True	AATAAA	-21	NA	29553073	29543360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552921
ENSMUST00000085793.3	chr12	+	1992	3	FSM	ENSMUSG00000051721.7	ENSMUST00000085793.3	1992	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGCTACAGTATATTCA	NA	False	NA	NA	False	NA	NA	NA	4900145	4906925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4901943_4905277_4905393_4906845
ENSMUST00000085797.6	chr1	+	2473	4	FSM	ENSMUSG00000066652.6	ENSMUST00000085797.6	2473	4	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_3	71.1071179434395	2273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	21	True	AATAAA	-19	NA	180720672	180726668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180720999_180721699_180721947_180722160_180722407_180725014
ENSMUST00000085809.11	chr7	-	7713	23	FSM	ENSMUSG00000030583.17	ENSMUST00000085809.11	7713	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	17.05054469453	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	9138	False	NA	-7	True	AATAAA	-11	NA	29204885	29019802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29203275_29203341_29204718
ENSMUST00000085814.5	chr12	-	7329	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_22	13.9950552070342	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGCCTCTTCATTTAT	NA	False	NA	0	True	AATAGA	-19	NA	4527182	4297361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ENSMUST00000085814.5-0	chr12	-	5250	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	0	2079	0	0	multi-exon	FALSE	canonical	3	76	junction_22	13.9950552070342	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	4527182	4299440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ENSMUST00000085835.8	chr7	+	2724	32	FSM	ENSMUSG00000037337.12	ENSMUST00000085835.8	2724	32	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_17	22.4346431975332	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCGGAGGAGAGATTTT	NA	False	NA	22	True	AATAAA	-27	NA	28682252	28702703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28701772_28701829_28702521
ENSMUST00000085851.12	chr7	-	1243	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_1	23.6761483354029	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTTCCTGCTTATTT	NA	False	NA	1	True	AATAAA	-33	NA	28465939	28458456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
ENSMUST00000085852.11	chr5	-	3318	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	27.3530162870569	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATAAAAAAATTAATGAAAA	1734	False	NA	NA	False	NA	NA	NA	138618020	138603245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
ENSMUST00000085852.11-0	chr5	-	2189	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	-3	1132	0	0	multi-exon	FALSE	canonical	3	23	junction_3	27.3530162870569	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATCTTTGTTTGTTTA	1731	False	NA	-5	True	AATAAA	-14	NA	138618023	138604377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
ENSMUST00000085856.12	chr5	+	3270	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	11	2031	0	-2031	multi-exon	FALSE	canonical	3	42	junction_4	9.52299847737046	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAATGACGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	138439740	138456925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
ENSMUST00000085894.12	chr1	+	1908	12	FSM	ENSMUSG00000026546.17	ENSMUST00000085894.12	1908	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	6.26415751889171	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACAGCTCCACTTCACTGC	5422	False	NA	6	True	ATTAAA	-19	NA	172348610	172373437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_172348749_172355356_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361692_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
ENSMUST00000085901.13	chr7	+	2534	11	FSM	ENSMUSG00000002409.19	ENSMUST00000085901.13	2534	11	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_5	4.15210789840534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCCTGAGCGTTTGCA	NA	False	NA	NA	False	AGTAAA	-14	NA	27878893	27886719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885455_27885786_27885894_27885976
ENSMUST00000085909.9	chr9	+	2126	11	FSM	ENSMUSG00000032076.21	ENSMUST00000085909.9	2126	11	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	77.3110600108419	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47441554	47762327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47740674_47740708_47759464_47759597_47761569
ENSMUST00000085913.11-1	chr1	-	3388	23	FSM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	65	2774	65	60	multi-exon	FALSE	canonical	3	93	junction_19	23.4067518690196	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCACTCTGCTACATTTTC	NA	False	NA	-2	True	NA	NA	NA	172125566	172102049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ENSMUST00000085939.8	chr9	+	1788	8	FSM	ENSMUSG00000066705.8	ENSMUST00000085939.8	1788	8	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_2	224.259325108142	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTCTGAGTGGCTTTTC	368	False	NA	18	True	AATAAA	-22	NA	45281482	45307453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_45281787_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ENSMUST00000085941.12	chr5	-	740	5	FSM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	104.169033306449	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTCATTCTGGGGTAT	NA	False	NA	6	True	AATAAA	-22	NA	137015755	137011043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137015664
ENSMUST00000085953.5	chr7	+	2387	6	FSM	ENSMUSG00000057229.12	ENSMUST00000085953.5	2387	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.2330568450697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACCCTGTGGCCTTTCCTC	1818	False	NA	36	True	NA	NA	NA	25318917	25324973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_25319890_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ENSMUST00000085984.11	chr5	-	1516	13	FSM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	290.243898873574	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCCTGGCCCTGCA	NA	False	NA	-1	True	ATTAAA	-16	NA	135093520	135081810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867_135093030_135093377
ENSMUST00000085992.4	chr1	-	4018	6	FSM	ENSMUSG00000026564.10	ENSMUST00000085992.4	4018	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	17.4768418199628	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCTTCATTCTGGT	NA	False	NA	-6	True	ATTAAA	-14	NA	165955465	165925721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954773_165955360
ENSMUST00000086006.12	chr7	-	2668	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	22	3712	0	423	multi-exon	TRUE	canonical	3	37	junction_1	10.4986771653491	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTAGTCTTTTTTATTGT	NA	False	NA	NA	False	TATAAA	-30	NA	23907552	23897083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ENSMUST00000086013.4	chr7	-	645	1	FSM	ENSMUSG00000066724.4	ENSMUST00000086013.4	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1040	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAAAAATAAGGCTG	NA	False	NA	NA	False	AATAAA	-13	NA	23646715	23646070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_23646100_23646700
ENSMUST00000086032.4	chr1	-	1602	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATACCCATGAAGCTA	NA	False	NA	-24	True	AATAAA	-19	NA	164135058	164119698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
ENSMUST00000086032.4-0	chr1	-	2554	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	5	-957	0	216	multi-exon	FALSE	canonical	3	8	junction_7	61.8978750747997	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTAGTGCCCTTTCCTTT	NA	False	NA	-21	True	AATAAA	-16	NA	164135053	164118741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
ENSMUST00000086041.7	chr7	-	2180	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_6	32.5501152071694	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCCCCTTATTTAG	NA	False	NA	-1	True	AATAAA	-29	NA	19338411	19314959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ENSMUST00000086046.10	chr5	+	2112	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_9	37.917389085507	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGCACGATTGAGACC	7767	False	NA	18	True	AATAAA	-17	NA	129802126	129835391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ENSMUST00000086058.13	chr19	+	1388	11	FSM	ENSMUSG00000071657.13	ENSMUST00000086058.13	1388	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	60.1671837466239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8817882	8826030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUST00000086075.13	chr5	-	2521	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_1	171.680966232913	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTTCTGTGACTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	125418158	125354150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ENSMUST00000086104.6	chr7	+	3628	18	FSM	ENSMUSG00000041187.17	ENSMUST00000086104.6	3628	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.00518582928113	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACAGG	NA	False	NA	NA	False	NA	NA	NA	16576989	16604389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
ENSMUST00000086112.8	chr7	+	836	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	14.0423466699836	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	False	NA	19	True	AATAAA	-19	NA	16472334	16483219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
ENSMUST00000086123.11	chr5	-	6620	24	FSM	ENSMUSG00000029406.16	ENSMUST00000086123.11	6620	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	7.50022053866047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	332	False	NA	-11	True	ATTAAA	-16	NA	124354481	124256752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378
ENSMUST00000086153.8	chr1	-	4414	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	39.1298205610869	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	156546656	156506140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
ENSMUST00000086167.12	chr9	+	5161	26	FSM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	11.7439346047226	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297487	31332629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ENSMUST00000086199.12	chr1	+	1352	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	0	1440	0	101	multi-exon	FALSE	canonical	3	76	junction_3	27.7213315376845	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGTTAATCTTGCTTT	NA	False	NA	20	True	NA	NA	NA	153775689	153784029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ENSMUST00000086200.11	chr5	-	4999	23	FSM	ENSMUSG00000029475.18	ENSMUST00000086200.11	4999	23	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_22	156.230069803299	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAATCTACAC	9950	False	NA	NA	False	TATAAA	-8	NA	123126596	123008743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123070529_123071015_123072795_123072923_123079015_123079132_123085789_123085944_123087132_123087227_123099075_123099183_123099472_123099652_123120839_123120887_123122524_123122604_123125724_123125870_123126529
ENSMUST00000086216.9	chr5	-	2760	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	0	0	0	0	multi-exon	TRUE	canonical	3	1165	junction_8	284.126264845403	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATCCTCTTAAATC	NA	False	NA	NA	False	AATAAA	-2	NA	122959402	122925521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000086248.7	chr7	+	1154	7	FSM	ENSMUSG00000070837.7	ENSMUST00000086248.8	1154	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	169.856802434678	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2794	False	NA	20	True	ATTAAA	-21	NA	6998381	7006090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6998548_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUST00000086278.7	chr9	-	3238	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	8.19407451411428	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTGTAAATTAAGCATT	NA	False	NA	-8	True	AATAAA	-17	NA	22218934	22188043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ENSMUST00000086281.5	chr9	-	3574	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	12.747548783982	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTAGTCTGAGATGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	22171191	22158725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
ENSMUST00000086294.11	chr5	+	1442	8	FSM	ENSMUSG00000004455.17	ENSMUST00000086294.11	1442	8	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_7	836.265410461711	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTTTCTGTCAGCA	NA	False	NA	3	True	ATTAAA	-19	NA	122296418	122313336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117_122312179_122313042
ENSMUST00000086310.8	chr5	-	4195	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	20.0187412191676	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCACCACAGAAACAGG	NA	False	NA	NA	False	NA	NA	NA	121974922	121953710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
ENSMUST00000086325.13	chr17	-	2443	7	FSM	ENSMUSG00000040097.17	ENSMUST00000086325.13	2443	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	22.386131619574	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATGTTGTGTGTTTGA	7605	False	NA	NA	False	AATATA	-20	NA	23990496	23974393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
ENSMUST00000086327.12	chr7	+	3672	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.1214882097676	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAACTGGAGGTGTCCC	2972	False	NA	NA	False	NA	NA	NA	6289577	6310882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ENSMUST00000086349.5	chr7	+	1142	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCACTGTGTGTTCAGTC	2940	False	NA	5	True	AATAAA	-15	NA	5018468	5021486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5018560_5020435
ENSMUST00000086368.12	chr5	-	1397	7	FSM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	0	580	0	0	multi-exon	FALSE	canonical	3	61	junction_5	116.597241248096	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025645	121014784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835_121024125_121025442
ENSMUST00000086399.6	chr9	+	2535	7	FSM	ENSMUSG00000037405.9	ENSMUST00000086399.6	2535	7	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	34.8456915876586	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGAGTTTGTGTACAG	NA	False	NA	16	True	AATAAA	-21	NA	20927280	20940113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938977_20939066
ENSMUST00000086421.9	chr1	+	2772	5	FSM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	15.4757875405422	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTGTGTGTTTGTGTT	NA	False	NA	11	True	AATAAA	-15	NA	43484910	43609675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020_43593743_43608307
ENSMUST00000086423.6	chr17	-	1988	1	FSM	ENSMUSG00000066878.6	ENSMUST00000086423.6	1988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1443	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTTTGAGATG	NA	False	NA	NA	False	AATAAA	-34	NA	90217877	90215889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_90215900_90217900
ENSMUST00000086458.10	chr9	-	2056	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	23	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20556063	20549084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20550495_20553319_20553393_20555490
ENSMUST00000086459.6	chr9	-	2086	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	12	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	False	NA	-4	True	ATTAAA	-18	NA	20554102	20549084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20550495_20553319_20553393_20553499
ENSMUST00000086459.6-0	chr9	-	4038	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086459.6	2086	3	-1949	-3	0	0	multi-exon	FALSE	canonical	3	69	junction_2	12	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556051	20549081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20550495_20553319_20553393_20553499
ENSMUST00000086461.13	chr5	-	2796	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	0	0	0	0	multi-exon	TRUE	canonical	3	1613	junction_7	125.046431376509	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACCGTCATGCACCGAG	NA	False	NA	NA	False	AATAAA	-19	NA	117527112	117516167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUST00000086461.13-0	chr5	-	1750	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	0	1046	0	468	multi-exon	FALSE	canonical	3	1613	junction_7	125.046431376509	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527112	117517213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUST00000086471.12	chr5	-	2425	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCACGTGGTCTGTTTC	NA	False	NA	-4	True	GATAAA	-18	NA	117254063	117229744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ENSMUST00000086471.12-0	chr5	-	1668	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	0	757	0	0	multi-exon	FALSE	canonical	3	565	junction_3	37.0610396664344	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254063	117230501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ENSMUST00000086519.12	chr5	+	1358	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	6763	junction_6	6310.78692266926	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCAAGCCTGGCCTTT	NA	False	NA	3	True	ATTAAA	-14	NA	115697525	115701786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ENSMUST00000086521.11	chr1	-	7177	23	FSM	ENSMUSG00000053024.15	ENSMUST00000086521.11	7177	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	4.01057486450529	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGCACTTCTCACCT	NA	False	NA	0	True	AATAAA	-31	NA	132470677	132439519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470460
ENSMUST00000086523.7	chr5	+	2667	12	FSM	ENSMUSG00000029528.20	ENSMUST00000086523.7	2667	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	97.41612200476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGCCCTTGACGACTTC	NA	False	NA	NA	False	NA	NA	NA	115644866	115693037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUST00000086523.7-0	chr5	+	3773	12	FSM	ENSMUSG00000029528.20	ENSMUST00000086523.7	2667	12	-97	-1009	0	0	multi-exon	FALSE	canonical	3	21	junction_6	97.41612200476	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644769	115694046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689546_115689649_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUST00000086535.12	chr1	+	1049	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	0	0	0	0	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGGTTTGAACATGTTT	NA	False	NA	10	True	ATTAAA	-23	NA	39406922	39410992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUST00000086535.12-0	chr1	+	504	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	0	545	0	0	multi-exon	FALSE	canonical	3	7651	junction_1	2133.80345568658	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39406922	39410447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUST00000086545.5	chr17	-	2931	10	FSM	ENSMUSG00000033966.9	ENSMUST00000086545.5	2931	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.81968389787767	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTATTCAAATCAATGAT	NA	False	NA	NA	False	AATAAA	-26	NA	80871263	80830978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80832816_80841226_80841362_80842822_80842880_80846932_80847016_80851048_80851247_80855120_80855212_80858254_80858328_80863735_80863858_80867778_80868004_80871153
ENSMUST00000086555.11	chr17	-	4737	24	FSM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_22	13.7365159867987	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGTGTGGAGTAGACG	878	False	NA	-7	True	AATAAA	-13	NA	80597572	80545739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
ENSMUST00000086556.12	chr1	+	4433	5	FSM	ENSMUSG00000026436.16	ENSMUST00000086556.12	4433	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	2.9474565306379	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCTTTCAGTGACTTCT	43	False	NA	NA	False	NA	NA	NA	131935344	131954186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131951290
ENSMUST00000086559.7	chr1	+	4697	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	13.4402380931292	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTATCCCTGTGTGTCT	5202	False	NA	23	True	AATAAA	-20	NA	131755714	131776603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ENSMUST00000086564.11	chr5	-	2984	20	FSM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_12	54.5305322490843	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911523	114867635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUST00000086580.12	chr9	-	4115	8	FSM	ENSMUSG00000053110.14	ENSMUST00000086580.12	4115	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	48.6117479712088	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAACTTTTTTACATT	15	True	NA	-6	True	AATAAA	-22	NA	8004589	7931999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ENSMUST00000086596.2	chr1	-	378	1	FSM	ENSMUSG00000094122.2	ENSMUST00000086596.2	378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACTCATGTCAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	129729501	129729123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_129729100_129729500
ENSMUST00000086614.12	chr1	-	4210	21	FSM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_3	27.0654761642946	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTATGGGTACGT	NA	False	NA	-5	True	AATAAA	-22	NA	128030199	127881920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
ENSMUST00000086635.9	chr5	+	2761	12	FSM	ENSMUSG00000050017.12	ENSMUST00000086635.9	2761	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	273.518821024341	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478628	111536225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111494985_111494994_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUST00000086643.12	chr5	-	1868	7	FSM	ENSMUSG00000029507.17	ENSMUST00000086643.12	1868	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	212.004454879818	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110928462	110921532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928105
ENSMUST00000086693.12	chr17	-	7221	14	FSM	ENSMUSG00000052105.18	ENSMUST00000086693.12	7221	14	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	28.2669020495577	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTTGGTGTCACCGTTT	NA	False	NA	-13	True	AATAAA	-21	NA	66756745	66643976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ENSMUST00000086721.10	chr1	+	5414	29	FSM	ENSMUSG00000026319.14	ENSMUST00000086721.10	5414	29	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_22	32.829491470385	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATTTTAGAAATCTAATC	NA	False	NA	88	True	AATAAA	-18	NA	105591637	105682916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668737_105668821_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ENSMUST00000086723.10	chr17	+	6991	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	8.61970531560628	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	False	NA	9	True	AATAAA	-19	NA	64907730	65062105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ENSMUST00000086725.6	chr1	+	2858	2	FSM	ENSMUSG00000067017.6	ENSMUST00000086725.6	2858	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATCCATGCCACACTG	NA	False	NA	NA	False	AATAAA	-29	NA	105383695	105386554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_105384509_105384509
ENSMUST00000086764.7	chr19	+	396	1	FSM	ENSMUSG00000067038.7	ENSMUST00000086764.7	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATTTTGGCTGAAA	NA	False	NA	NA	False	AAGAAA	-1	NA	59310802	59311198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_59310800_59311200
ENSMUST00000086801.7	chr17	-	3283	17	FSM	ENSMUSG00000024206.16	ENSMUST00000086801.7	3283	17	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_12	29.2883695986991	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138013	57082896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ENSMUST00000086828.10	chr17	-	5608	29	FSM	ENSMUSG00000013236.18	ENSMUST00000086828.10	5608	29	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_28	67.8619077274443	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56769216	56719430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ENSMUST00000086829.11	chr6	+	3151	9	FSM	ENSMUSG00000003452.16	ENSMUST00000086829.11	9667	9	85	6431	0	167	multi-exon	FALSE	canonical	3	5	junction_7	6.68487097856047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTTCGTGTGATCAATT	235	False	NA	NA	False	AATAAA	-10	NA	149310566	149458396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
ENSMUST00000086831.4	chr5	+	5219	15	FSM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_14	9.78049913170622	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTGTTAAAAACACGT	NA	False	NA	9	True	AATAAA	-15	NA	104607315	104653685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ENSMUST00000086833.13	chr5	+	1411	8	FSM	ENSMUSG00000029304.15	ENSMUST00000086833.13	1411	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2820.707358093	3022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGTCTGGTGGTGTCAA	NA	False	NA	29	True	AATAAA	-16	NA	104582983	104588914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104584766_104584770_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000086843.11	chr1	+	2490	5	FSM	ENSMUSG00000026311.17	ENSMUST00000086843.11	2490	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.93700393700591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTAACTTGTTAATACT	8785	False	NA	NA	False	AATAAA	-27	NA	91468265	91483810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91468587_91471877_91472020_91474649_91474953_91479775_91480162_91482472
ENSMUST00000086843.11-0	chr1	+	5821	5	FSM	ENSMUSG00000026311.17	ENSMUST00000086843.11	2490	5	170	-3501	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.93700393700591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGGCTCTCTAGCTC	8955	False	NA	7	True	AATAAA	-19	NA	91468435	91487311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91468587_91471877_91472020_91474649_91474953_91479775_91480162_91482472
ENSMUST00000086844.10	chr11	-	2471	10	FSM	ENSMUSG00000000782.17	ENSMUST00000086844.10	2471	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	107.28363238527	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTTTGTATTGTAA	NA	False	NA	-89	True	NA	NA	NA	52173398	52143197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173380
ENSMUST00000086851.2	chr1	-	1335	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	18.4932420089069	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	False	NA	-1	True	AATAAA	-35	NA	91340944	91339204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
ENSMUST00000086861.12	chr1	+	2815	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	6.01698276818648	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCATTCTCTGTCTGTA	NA	False	NA	8	True	ATTAAA	-20	NA	91294151	91301939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
ENSMUST00000086869.6	chr17	+	1660	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	8.99205998963212	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGTGTTGGAGTCTGCT	344	False	NA	8	True	NA	NA	NA	56266173	56275285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ENSMUST00000086876.7	chr17	-	2261	17	FSM	ENSMUSG00000024174.10	ENSMUST00000086876.7	3523	17	-29	1291	0	-1291	multi-exon	FALSE	canonical	1	2	junction_7	6.91804705101086	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCTTGTGAATATGTTG	NA	False	NA	NA	False	NA	NA	NA	56019607	55960241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
ENSMUST00000086900.11	chr5	-	2149	9	FSM	ENSMUSG00000029328.16	ENSMUST00000086900.11	2149	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	358.236915322807	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTCCTGCGTCAGGT	NA	False	NA	-20	True	AATAAA	-15	NA	100187523	100182585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUST00000086932.10	chr17	+	2342	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_4	27.2370955683604	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTCCTGGCTCTGCGGT	NA	False	NA	18	True	AGTAAA	-18	NA	48047954	48103344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUST00000086969.13	chr19	+	2278	9	FSM	ENSMUSG00000025227.15	ENSMUST00000086969.13	2278	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	30.2561977122044	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4198	False	NA	13	True	AGTAAA	-13	NA	46345318	46363691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
ENSMUST00000086978.12	chr5	-	4066	14	FSM	ENSMUSG00000029403.15	ENSMUST00000086978.12	4066	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	2.30255839186089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCCTCTTCCTTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	92190901	92153932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92155994_92156823_92156913_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190657
ENSMUST00000087012.7	chr17	-	1989	10	FSM	ENSMUSG00000067144.8	ENSMUST00000087012.7	1989	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	10.8297714942322	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCTAGTAGCCAGGACT	2817	False	NA	NA	False	NA	NA	NA	46749383	46743108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46743444_46743872_46744080_46744500_46744610_46744774_46744990_46745474_46745585_46745810_46745935_46747734_46747904_46748004_46748160_46748248_46748353_46748922
ENSMUST00000087026.13	chr17	-	1314	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_8	54.719597723302	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTTTTGTCTA	NA	False	NA	2	True	AATAAA	-25	NA	46558980	46554845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ENSMUST00000087031.7	chr17	+	5081	32	FSM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	77.9414252168146	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCCCTATTTTCCTTT	NA	False	NA	14	True	AGTAAA	-16	NA	46513707	46554524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546928_46547838_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ENSMUST00000087031.7-1	chr17	+	3776	32	FSM	ENSMUSG00000067150.7	ENSMUST00000087031.7	5081	32	0	1305	0	-1302	multi-exon	FALSE	canonical	0	0	junction_23	77.9414252168146	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCCTCGGTTGTCATCT	NA	False	NA	8	True	NA	NA	NA	46513707	46553219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546928_46547838_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ENSMUST00000087052.11	chr4	-	1292	8	FSM	ENSMUSG00000028218.20	ENSMUST00000087052.11	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	133.555614037061	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACATAGTCTTTCTTTC	2	True	NA	-42	True	ATTAAA	-39	NA	12171995	12153723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168228_12168325_12168964_12169034_12170983_12171219_12171697
ENSMUST00000087133.11	chr5	+	3371	19	FSM	ENSMUSG00000036435.14	ENSMUST00000087133.11	3371	19	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	33.5248203611431	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTCTTAAGCCTTATA	NA	False	NA	17	True	AATAAA	-27	NA	76677157	76718141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ENSMUST00000087143.7	chrX	+	5172	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	0	0	0	0	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTAAGTTGTGGCCAAC	5347	False	NA	NA	False	AATATA	-11	NA	158155173	158172924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUST00000087143.7-0	chrX	+	948	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	0	4224	0	-4224	multi-exon	FALSE	canonical	3	2276	junction_6	179.511064344854	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTAAGCCCTGCCTT	5347	False	NA	14	True	AATAAA	-26	NA	158155173	158168700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUST00000087157.5	chrX	+	1935	1	FSM	ENSMUSG00000047485.7	ENSMUST00000087157.5	1935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTGAGTCCAGGCTTCA	NA	False	NA	NA	False	NA	NA	NA	156601430	156603365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_156601400_156603400
ENSMUST00000087195.9	chr5	-	2554	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGCTGGCTTTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-35	NA	73496335	73479541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUST00000087195.9-0	chr5	-	644	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	434	1476	0	-329	multi-exon	FALSE	canonical	3	44	junction_6	41.8107508768844	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAACCTGTAATTCT	NA	False	NA	-9	True	AATATA	-10	NA	73495901	73481017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUST00000087200.4	chr17	+	2848	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGAGCGGCTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	36290742	36300354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ENSMUST00000087200.4-1	chr17	+	2158	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	95	595	95	-595	multi-exon	FALSE	canonical	3	575	junction_1	37.9601792225955	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTCCCCAGGTGGCCT	NA	False	NA	23	True	AATAAA	-17	NA	36290837	36299759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ENSMUST00000087210.7	chr17	+	4222	19	FSM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	14.6080478411181	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTATGTTTCACT	NA	False	NA	26	True	AATAAA	-26	NA	36228087	36243173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ENSMUST00000087211.9	chr17	+	4255	20	FSM	ENSMUSG00000039220.17	ENSMUST00000087211.9	4255	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.7700795901305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTATGTTTCACTTC	NA	False	NA	28	True	AATAAA	-28	NA	36227457	36243175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36227491_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ENSMUST00000087215.7	chr1	+	3268	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_5	46.4318680148337	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	860	False	NA	38	True	AATAAA	-23	NA	74545216	74570001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUST00000087216.12	chr5	-	3712	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_22	12.1822421907212	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717027	72670643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ENSMUST00000087225.6	chr1	+	2859	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	11.428445869846	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGTCTGAGCTCTCAAT	9363	False	NA	5	True	NA	NA	NA	74371768	74392845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ENSMUST00000087228.11	chr5	+	3433	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGATACTGGATTTTAT	NA	False	NA	NA	False	AATACA	-16	NA	69714303	69730447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUST00000087228.11-0	chr5	+	2033	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	27	1373	0	0	multi-exon	FALSE	canonical	3	69	junction_8	27.9058125665604	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	False	NA	3	True	AATAAA	-14	NA	69714330	69729074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUST00000087256.12	chr5	-	3362	18	FSM	ENSMUSG00000029207.17	ENSMUST00000087256.12	3362	18	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	40.4423636189393	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	ATTAAA	-8	NA	66776014	66459230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520053_66520059_66520059_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ENSMUST00000087258.10	chrX	-	6559	13	FSM	ENSMUSG00000025272.17	ENSMUST00000087258.10	6559	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.87533068088784	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTATTCTGTCCTTTAAT	NA	False	NA	-17	True	ATTAAA	-18	NA	149440579	149428299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149428518_149428689_149432652_149433429_149433545_149433972_149434036_149434411_149434455_149434548_149434629_149435279_149435372_149435836_149435917_149436115_149436180_149436287_149436393_149436984_149438611_149438879_149438950_149440538
ENSMUST00000087264.4	chr5	+	5308	18	FSM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.723490387184	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTAGAGCCCTGGACTTT	NA	False	NA	NA	False	NA	NA	NA	65921462	65983993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ENSMUST00000087264.4-0	chr5	+	8766	18	FSM	ENSMUSG00000037795.15	ENSMUST00000087264.4	5308	18	0	-3458	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.723490387184	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGAAGAAATCCTT	NA	False	NA	18	True	AATAAA	-16	NA	65921462	65987451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ENSMUST00000087285.5	chr4	+	2324	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCCATCGTGTTGTACA	NA	False	NA	-45	True	TATAAA	-43	NA	99544535	99546859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99544500_99546900
ENSMUST00000087315.14	chr17	+	4137	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	417.564149877336	2474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9474	False	NA	10	True	AATAAA	-11	NA	35219962	35235298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ENSMUST00000087316.6	chrX	-	3561	13	FSM	ENSMUSG00000067276.6	ENSMUST00000087316.6	3561	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	5.06348584365444	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTGACTAGTTAATGG	NA	False	NA	NA	False	AATAAA	-22	NA	142610410	142585226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_142586823_142587352_142587490_142587670_142587793_142588390_142588594_142588758_142588882_142590241_142590429_142590522_142590601_142590836_142591031_142591613_142591807_142592290_142592500_142593840_142593973_142603291_142603473_142610204
ENSMUST00000087320.13	chr14	-	3650	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	-82	6252	0	0	multi-exon	FALSE	canonical	3	27	junction_12	30.2633412313513	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTTCAATTATTTTTT	NA	False	NA	60	True	ATTAAA	-18	NA	45895600	45832178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ENSMUST00000087321.4	chr19	-	2725	2	FSM	ENSMUSG00000067279.4	ENSMUST00000087321.4	2725	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGAATGTTTTCTTTCC	NA	False	NA	1	True	AATAAA	-17	NA	36714053	36709130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_36711755_36713952
ENSMUST00000087324.7	chr5	+	2369	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_6	76.13589532023	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATAAGGTTTATTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	64250292	64285694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ENSMUST00000087327.13	chr5	-	3093	8	FSM	ENSMUSG00000047881.15	ENSMUST00000087327.13	3093	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	231.259726767308	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGCGACATCTTACAGGA	NA	False	NA	-13	True	AATAAA	-23	NA	64126166	64066407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64097011_64097106_64125988
ENSMUST00000087333.9	chrX	+	5149	7	FSM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	37.6592913133296	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTAGCATTTTGAATC	NA	False	NA	8	True	AATAAA	-15	NA	141464413	141621234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_141464553_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ENSMUST00000087341.7	chr19	+	5564	32	FSM	ENSMUSG00000024795.12	ENSMUST00000087341.7	5564	32	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_15	68.2854387453211	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGGTGTACTTTATAAGG	NA	False	NA	3	True	AATAAA	-14	NA	34899760	34953135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ENSMUST00000087342.13	chr17	-	308	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	68	16	0	0	multi-exon	FALSE	canonical	3	4589	junction_1	7337.59253585413	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043468	34042025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
ENSMUST00000087351.9	chr15	+	1737	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	9291	junction_7	1545.88284736515	8402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148880	103153382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUST00000087360.9	chr5	+	5252	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTAGATGTCTTCTGT	NA	False	NA	12	True	AATAAA	-18	NA	53713175	53814700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000087360.9-0	chr5	+	4031	11	FSM	ENSMUSG00000039191.13	ENSMUST00000087360.9	5252	11	0	1221	0	0	multi-exon	FALSE	canonical	3	64	junction_1	131.697532247191	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAATCAATTTCAATA	NA	False	NA	6	True	ATTAAA	-17	NA	53713175	53813479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53713246_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000087366.11	chr1	+	8364	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	12.7375389286621	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTGTGTCTAGCTT	NA	False	NA	NA	False	NA	NA	NA	64571977	64643707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ENSMUST00000087401.12	chrX	-	3862	17	FSM	ENSMUSG00000031434.16	ENSMUST00000087401.12	3862	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	16.8851821133205	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAGGCTTGAATTTGGG	NA	False	NA	-12	True	AATAAA	-17	NA	138772426	138722652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_138723578_138723878_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758645_138759547_138759766_138765243_138765377_138771818_138771892_138772020
ENSMUST00000087409.10	chr2	-	2577	3	FSM	ENSMUSG00000027583.14	ENSMUST00000087409.10	2577	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTCTGCTCTCTTTATT	8538	False	NA	-2	True	AATAAA	-17	NA	181101219	181052337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181053774_181065211_181066182_181101048
ENSMUST00000087441.11	chr5	-	3664	27	FSM	ENSMUSG00000029086.16	ENSMUST00000087441.11	3664	27	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	5.3433861125628	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTGGTGTTTGGTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	44259023	44150963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_44151839_44152416_44152457_44158118_44158188_44158611_44158636_44159127_44159244_44162227_44162321_44163506_44163576_44164364_44164446_44168536_44168591_44170217_44170311_44171437_44171510_44172099_44172247_44173907_44173993_44175634_44175739_44178149_44178274_44184024_44184178_44186951_44187112_44190285_44190350_44191688_44191764_44194765_44194984_44201658_44201749_44202861_44202926_44204839_44204961_44213219_44213426_44220467_44220527_44251736_44252111_44258989
ENSMUST00000087445.7	chr6	+	1775	5	FSM	ENSMUSG00000067338.7	ENSMUST00000087445.7	1775	5	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_3	43.6312674580971	931	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCTTCCCTGTGTGCT	NA	False	NA	16	True	AATAAA	-36	NA	145561482	145567205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145561816_145563958_145564182_145564457_145564607_145564908_145565590_145566816
ENSMUST00000087467.12-1	chr8	+	1840	5	FSM	ENSMUSG00000003573.16	ENSMUST00000087467.12	880	5	207	-1167	0	1167	multi-exon	FALSE	canonical	3	53	junction_4	81.1202810646018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTTCTATTTTTCA	NA	False	NA	NA	False	TTTAAA	-6	NA	70735683	70740347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70738945
ENSMUST00000087475.11	chr1	-	1823	13	FSM	ENSMUSG00000038079.15	ENSMUST00000087475.11	1823	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	58.3887237020604	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAAGCTTTATTAACTG	4340	False	NA	-17	True	AATAAA	-17	NA	59158965	59139755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59156489_59156501_59157133_59157166_59158861
ENSMUST00000087511.10	chr5	+	1291	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_4	19.5751756058534	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTAATGCAAATTTGG	NA	False	NA	NA	False	AATAAA	-25	NA	38417528	38426978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ENSMUST00000087514.9	chr5	+	1563	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	0	0	0	0	multi-exon	FALSE	canonical	3	2026	junction_5	151.553981719386	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377813	38391650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ENSMUST00000087517.10	chr2	-	8723	16	FSM	ENSMUSG00000038914.16	ENSMUST00000087517.10	8723	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	49.7552230647419	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTCTCTCTTCACTCA	NA	False	NA	-19	True	AATAAA	-14	NA	180344143	180299756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ENSMUST00000087521.13	chr1	+	3769	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAATGTCAATGTACAA	NA	False	NA	NA	False	AAGAAA	-2	NA	58484309	58502615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUST00000087521.13-1	chr1	+	1470	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	365	1934	-112	138	multi-exon	FALSE	canonical	3	215	junction_3	28.6787765119473	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTGTTTTGTTTCTT	NA	False	NA	14	True	ATTAAA	-14	NA	58484674	58500681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUST00000087541.12	chrX	-	3119	13	FSM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	0	0	0	0	multi-exon	TRUE	canonical	1	13	junction_4	11.7686022959398	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTATCTCTAGTCCATG	NA	False	NA	-5	True	AATAAA	-23	NA	133177731	133123843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ENSMUST00000087543.5	chr17	-	1580	1	FSM	ENSMUSG00000067370.5	ENSMUST00000087543.5	1580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCAGCGTCTTCACCAG	NA	False	NA	-2	True	AATAAA	-17	NA	34170462	34168882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34168900_34170500
ENSMUST00000087556.7	chr19	-	5683	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	0	0	0	0	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTATTTAAGATGAGAGTA	NA	False	NA	-11	True	AATAAA	-23	NA	23251182	23183814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ENSMUST00000087556.7-1	chr19	-	5285	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	-79	477	0	-477	multi-exon	FALSE	canonical	2	93	junction_7	95.2415696910872	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTTAAAAATATTTTTAAT	NA	False	NA	-11	True	AATAAA	-16	NA	23251261	23184291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ENSMUST00000087557.12	chrX	-	1765	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCGTTTTAATTTTTAGA	NA	False	NA	4	True	AATAAA	-42	NA	132799178	132791816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ENSMUST00000087557.12-1	chrX	-	1019	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	78	668	-57	-668	multi-exon	FALSE	canonical	3	78	junction_3	4.33777898591114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTTTCCCTTGGATTTG	NA	False	NA	NA	False	AGTAAA	-18	NA	132799100	132792484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ENSMUST00000087563.7	chr2	+	1346	6	FSM	ENSMUSG00000039069.20	ENSMUST00000087563.7	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	31.6884837125414	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	False	NA	NA	False	AATATA	-1	NA	179720415	179727695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ENSMUST00000087566.11	chr7	-	1549	10	FSM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_9	8041.23258932084	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTCATGTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	126398313	126394407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
ENSMUST00000087582.13	chr17	-	2370	17	FSM	ENSMUSG00000059208.16	ENSMUST00000087582.13	2370	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	626.847466369411	1828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5740	False	NA	-8	True	AATAAA	-13	NA	33904393	33865212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33888142_33888151_33889054_33889108_33896247_33896415_33904240
ENSMUST00000087585.10	chr1	-	882	10	FSM	ENSMUSG00000025977.16	ENSMUST00000087585.10	882	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	6.71831842570265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCTGGTTTTCTTCC	NA	False	NA	NA	False	ATTAAA	-19	NA	55402478	55339227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55402457
ENSMUST00000087614.11	chr6	+	3727	8	FSM	ENSMUSG00000030232.19	ENSMUST00000087614.11	3727	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	41.8398306470214	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	140569224	140598552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ENSMUST00000087654.5	chr17	-	3407	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	5.73488351136175	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGTTCAAATGAGATTT	2759	False	NA	-16	True	NA	NA	NA	33252376	33235836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
ENSMUST00000087666.11	chr17	+	2950	4	FSM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	3.55902608401044	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGGTGATCGGTCTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	33212170	33224431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221731
ENSMUST00000087675.9	chr6	+	1729	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_6	37.3511629671688	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTGTTTATTTTC	NA	False	NA	20	True	AATACA	-20	NA	137731555	137814892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUST00000087723.5	chr17	-	8016	33	FSM	ENSMUSG00000038146.9	ENSMUST00000087723.5	8016	33	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_20	15.8899720244404	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGGTTTCTGTGCAAG	6039	False	NA	-1	True	AATAAA	-19	NA	32385826	32339793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ENSMUST00000087737.10	chr5	-	1987	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	11.160645142643	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGAGCTGGGCTGGA	NA	False	NA	-10	True	AATAAA	-19	NA	34671335	34653430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ENSMUST00000087865.4	chr6	-	1684	9	FSM	ENSMUSG00000030189.16	ENSMUST00000087865.4	1684	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_4	774.912807595151	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	4933	False	NA	-9	True	AATAAA	-21	NA	131365439	131341817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ENSMUST00000087867.6	chrX	+	2304	7	FSM	ENSMUSG00000073016.4	ENSMUST00000087867.6	2304	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1.67497927018682	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTTGTATGTGTTCAT	NA	False	NA	NA	False	ATTAAA	-32	NA	103526423	103551096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_103526956_103539341_103539385_103541880_103541951_103543009_103543073_103545350_103545513_103547934_103548034_103549761
ENSMUST00000087896.11	chrX	-	1255	8	FSM	ENSMUSG00000067561.13	ENSMUST00000087896.11	1255	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	63.8378046781251	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101896962	101891244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101896936
ENSMUST00000087908.10	chr2	+	3865	9	FSM	ENSMUSG00000027522.16	ENSMUST00000087908.10	3865	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	35.0633355515416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCATTCCTAGTATTAA	NA	False	NA	126	True	AATAAA	-24	NA	173918714	173941564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_173918983_173926438_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ENSMUST00000087916.11	chrX	-	1936	11	FSM	ENSMUSG00000067567.13	ENSMUST00000087916.11	1936	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	12.0747670784989	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTCCCACCGCTCTGT	NA	False	NA	-1	True	AATAAA	-15	NA	101548965	101328244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUST00000087933.10	chr1	+	4649	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_23	82.0288369004111	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTATAAATAAAAGTAAATA	3304	False	NA	-21	True	NA	NA	NA	43973166	44042131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUST00000087948.11	chrX	+	6809	45	FSM	ENSMUSG00000079487.12	ENSMUST00000087948.11	6809	45	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_14	18.8047135597997	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGAATGTACACATGG	NA	False	NA	31	True	AATACA	-22	NA	100317865	100341071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ENSMUST00000087951.7	chr19	+	2686	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_1	17.2699160391705	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	16	True	AATAAA	-19	NA	10666114	10691990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
ENSMUST00000087971.11	chr2	-	2438	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_1	95.1075181045116	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATTGTATAGTTT	NA	False	NA	0	True	AATAAA	-29	NA	168797192	168767280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUST00000087978.5	chr13	+	4463	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGACTAGGTTTCATTTG	NA	False	NA	NA	False	AATAAA	-15	NA	51562674	51576833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_51562982_51572677
ENSMUST00000088001.6	chr2	-	4932	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	29.1699998095456	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	2917	False	NA	-1	True	AATAAA	-25	NA	168049032	168022905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
ENSMUST00000088007.12	chr17	+	1942	10	FSM	ENSMUSG00000007570.17	ENSMUST00000088007.12	1942	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	38.9558154266543	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGGCTTGGTGGCTCA	354	False	NA	11	True	AATAAA	-13	NA	28532540	28545540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ENSMUST00000088010.12	chr5	-	4552	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337488	31313348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUST00000088010.12-0	chr5	-	3113	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	233	1206	0	233	multi-exon	FALSE	canonical	3	356	junction_18	84.1706086352278	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31337255	31314554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUST00000088041.11	chr2	-	1711	10	FSM	ENSMUSG00000017969.14	ENSMUST00000088041.11	1711	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.0830127201547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTAGGTGAGGCTGT	5262	False	NA	NA	False	NA	NA	NA	167082509	167033724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167033906_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
ENSMUST00000088086.4	chr2	-	3927	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_20	98.8976617519343	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTATCTTGGGACTT	NA	False	NA	-16	True	NA	NA	NA	165997205	165915839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ENSMUST00000088102.12	chrX	-	7002	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	NA	False	NA	-1	True	AATAAA	-22	NA	93167013	93118236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ENSMUST00000088102.12-1	chrX	-	5348	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	275	1379	0	-1378	multi-exon	FALSE	canonical	3	51	junction_8	23.8298001460356	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTTCATCCCCCTAT	NA	False	NA	97	True	AATAAA	-15	NA	93166738	93119615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ENSMUST00000088132.13	chr2	+	2447	16	FSM	ENSMUSG00000017897.19	ENSMUST00000088132.13	2447	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.44040069569642	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTACTGGCTTCAGTG	NA	False	NA	91	True	AATAAA	-12	NA	165436951	165613639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_165437185_165506705_165506807_165524756_165524803_165527468_165527612_165529538_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165596360_165596451_165603823_165603883_165605616_165605778_165608134_165608250_165608956_165609079_165611144_165611246_165612953
ENSMUST00000088137.3	chrX	-	1571	1	FSM	ENSMUSG00000067649.4	ENSMUST00000088137.3	1571	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTAGCACTAACTGGA	NA	False	NA	NA	False	NA	NA	NA	91164377	91162806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_91162800_91164400
ENSMUST00000088169.7	chr19	-	2762	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGTCTGCAACTTTAT	9039	False	NA	-18	True	AATAAA	-17	NA	7460567	7403265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ENSMUST00000088169.7-0	chr19	-	1703	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	-65	1124	0	518	multi-exon	FALSE	canonical	3	635	junction_1	35.2735343029618	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGTCTGTAACTGC	8974	False	NA	NA	False	AATAAA	-25	NA	7460632	7404389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ENSMUST00000088174.4	chr1	+	3719	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	0	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTGCTGTGGTCTGTGG	1763	False	NA	20	True	AATAAA	-15	NA	36107480	36145527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36108266_36142593
ENSMUST00000088194.7	chr6	-	1238	11	FSM	ENSMUSG00000000399.11	ENSMUST00000088194.7	1238	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	391.130873238102	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAGAGTCACTCTATT	NA	False	NA	-48	True	NA	NA	NA	126826088	126798958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821993_126826026
ENSMUST00000088217.12	chrX	+	5234	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	40.4669412401448	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76554618	76706589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ENSMUST00000088223.7	chr19	+	1103	7	FSM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	9.59166304662544	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTGGTTCCTCATCCG	NA	False	NA	38	True	ATTAAA	-44	NA	6973539	6976414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ENSMUST00000088233.13	chr15	-	4423	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	7.49447528272084	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGCACCAAGCTGT	NA	False	NA	-17	True	CATAAA	-17	NA	99268363	99215105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ENSMUST00000088237.6	chr19	+	3928	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAAATGTGTTTTATTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	60744424	60748352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_60744400_60748400
ENSMUST00000088244.6	chr5	+	1712	12	FSM	ENSMUSG00000056367.15	ENSMUST00000088244.6	1712	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	20.0016528242663	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTTATATTTCCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	25965023	26055340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ENSMUST00000088246.6	chr6	-	1509	5	FSM	ENSMUSG00000067702.6	ENSMUST00000088246.6	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	43.4453679924569	671	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTTCCTCTCTAGTGT	3461	False	NA	-8	True	AATAAA	-28	NA	125263005	125255236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125255618_125257932_125258614_125259315_125259465_125259718_125259942_125262930
ENSMUST00000088248.13	chr2	+	967	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_1	43.6458474542539	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTCAAGTTACCCT	NA	False	NA	NA	False	AATAAA	-25	NA	164611817	164614827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUST00000088287.10	chr1	+	4322	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATTGTGTGTGGTGTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	33758975	33781645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUST00000088287.10-0	chr1	+	2469	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	0	1853	0	0	multi-exon	FALSE	canonical	2	71	junction_6	20.1190335305671	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCTTTTCCTTTCTTT	NA	False	NA	8	True	TATAAA	-18	NA	33758975	33779792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUST00000088292.7	chr6	+	1393	2	FSM	ENSMUSG00000067714.14	ENSMUST00000088292.7	1393	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACGCAGTCTAAGTGAA	5038	False	NA	NA	False	NA	NA	NA	125044882	125059435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125044940_125058099
ENSMUST00000088294.12	chr6	+	1883	10	FSM	ENSMUSG00000072770.10	ENSMUST00000088294.12	1883	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	45.7669890199324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACGTGCTCTGCTTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	125026921	125040230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452_125030916_125031635_125031769_125037772_125037953_125038048_125038217_125039398_125039483_125039898
ENSMUST00000088307.5	chr17	+	3030	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTATGTCTCTCTGTTA	NA	False	NA	NA	False	AATATA	-16	NA	25403527	25406636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25403615_25403693
ENSMUST00000088307.5-0	chr17	+	900	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	0	2130	0	-2130	multi-exon	FALSE	canonical	3	314	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTCAATTTTCTCACCT	NA	False	NA	11	True	AATACA	-16	NA	25403527	25404506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25403615_25403693
ENSMUST00000088310.10	chr1	-	7561	15	FSM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_14	20.6837212930994	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTACTTTTATTTTTGGC	NA	False	NA	-4	True	AATAAA	-16	NA	30902337	30841422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067
ENSMUST00000088313.5	chrX	+	1338	6	FSM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	106.854293315711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	AATAAA	-13	NA	73298435	73305154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
ENSMUST00000088336.3	chr1	-	294	1	FSM	ENSMUSG00000067736.3	ENSMUST00000088336.3	294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTATTCTTCCCTCA	NA	False	NA	NA	False	NA	NA	NA	24651781	24651487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_24651500_24651800
ENSMUST00000088345.12	chr17	-	5543	32	FSM	ENSMUSG00000024163.18	ENSMUST00000088345.12	5543	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	22.2017051777373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155942	25116506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25127384_25127403_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25136968_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUST00000088357.12	chr6	-	4433	10	FSM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	22.6083126851416	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9215	False	NA	0	True	AAAACA	-21	NA	124733487	124719506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
ENSMUST00000088373.11	chr6	-	4455	22	FSM	ENSMUSG00000030257.17	ENSMUST00000088373.11	8887	22	0	4432	0	-4429	multi-exon	FALSE	canonical	3	12	junction_1	6.19450418404635	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTACGTATGTGTCTG	6453	False	NA	NA	False	NA	NA	NA	112924227	112699363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_112700163_112704173_112704502_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
ENSMUST00000088386.8-1	chr14	-	3300	23	FSM	ENSMUSG00000025557.11	ENSMUST00000088386.8	3121	23	-179	0	-179	0	multi-exon	FALSE	canonical	3	25	junction_3	5.65119017669934	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATATGTGTTTGTGTGT	2959	False	NA	-6	True	AATAAA	-12	NA	121742843	121697032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_121698186_121699878_121699987_121702314_121702459_121703293_121703403_121703531_121703640_121708689_121708740_121710417_121710568_121711957_121712078_121713376_121713459_121715470_121715560_121715642_121715676_121715803_121715849_121717380_121717471_121718067_121718155_121719158_121719242_121722259_121722344_121724048_121724140_121724405_121724506_121727201_121727322_121728404_121728547_121728640_121728723_121729085_121729103_121742630
ENSMUST00000088402.12	chr15	-	4223	24	FSM	ENSMUSG00000022475.20	ENSMUST00000088402.12	4223	24	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_19	5.55841976156414	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTATTTGCTTTAAA	1990	False	NA	-17	True	NA	NA	NA	97729648	97690561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
ENSMUST00000088419.13	chr14	+	4552	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.41842920042331	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTTGCGGTCTTCCTT	6829	False	NA	7	True	AATAAA	-17	NA	120513080	120669109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
ENSMUST00000088452.11	chr15	-	7266	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGAGTCTCGTATGATT	NA	False	NA	-17	True	ATTAAA	-16	NA	96540794	96469298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ENSMUST00000088452.11-1	chr15	-	2638	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	59	4569	59	0	multi-exon	FALSE	canonical	3	128	junction_15	89.8033901859439	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGGTTTGTTTCCCTC	NA	False	NA	-3	True	ATTAAA	-24	NA	96540735	96473867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ENSMUST00000088454.13	chr15	-	6966	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_15	70.2442089348929	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGAGTCTCGTATGATT	NA	False	NA	-17	True	ATTAAA	-16	NA	96540131	96469298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ENSMUST00000088464.12	chr17	-	2504	20	FSM	ENSMUSG00000052752.16	ENSMUST00000088464.12	2504	20	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_18	54.3646251286069	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24738182	24727823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104
ENSMUST00000088480.4	chr9	-	615	1	FSM	ENSMUSG00000061167.10	ENSMUST00000088480.4	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1324	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGTGATATTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	22097517	22096902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22096900_22097500
ENSMUST00000088512.13	chr17	+	1816	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_1	319.314188567323	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGTTTTACTGTCTG	901	False	NA	NA	False	AATAAA	-24	NA	24633636	24644875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000088523.11	chr2	-	1996	16	FSM	ENSMUSG00000027639.17	ENSMUST00000088523.11	1996	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	41.6778118427539	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTCCAGAGGATCTG	NA	False	NA	NA	False	NA	NA	NA	156977142	156943279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUST00000088538.6	chr2	-	1296	8	FSM	ENSMUSG00000079056.13	ENSMUST00000088538.6	1296	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	5.52175659716791	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATGGTTCCTCTGGCTTG	9628	False	NA	99	True	NA	NA	NA	127324419	127300049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127300309_127301249_127301313_127301902_127302008_127302352_127302461_127306967_127307039_127307268_127307339_127307773_127307899_127323924
ENSMUST00000088546.12	chrX	+	4409	17	FSM	ENSMUSG00000000838.18	ENSMUST00000088546.12	4409	17	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_14	131.607237049298	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722146	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ENSMUST00000088585.10	chr1	+	4630	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	8.51675685882192	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGCTTGCTAGAT	NA	False	NA	18	True	AATAAA	-42	NA	12788752	12930601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ENSMUST00000088615.11	chr1	-	6978	38	FSM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_35	18.4564716033902	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTTTTCATTGTTTT	NA	False	NA	-16	True	AATAAA	-37	NA	10302895	10207795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ENSMUST00000088627.11	chrX	+	3949	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088627.11	3949	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	9.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTATAACTTTTTTTG	9500	False	NA	12	True	AATAAA	-18	NA	57076002	57081919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_57077598_57078721_57078886_57079729
ENSMUST00000088629.4	chrX	+	1951	3	FSM	ENSMUSG00000067860.12	ENSMUST00000088629.4	1951	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	99.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATTATTGTTTTAT	9867	False	NA	NA	False	NA	NA	NA	57076369	57087096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_57077598_57078721_57078886_57086537
ENSMUST00000088652.6	chrX	+	2810	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	40.9980427114861	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGACTTGAGTTAACTTG	NA	False	NA	16	True	AATAAA	-31	NA	56098974	56112543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUST00000088658.11	chr1	-	4980	16	FSM	ENSMUSG00000025912.17	ENSMUST00000088658.11	4980	16	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	11.7158961339806	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTGGCTTGGCATTGC	NA	False	NA	-8	True	AATAAA	-12	NA	9770434	9737639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_9740238_9741803_9741984_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ENSMUST00000088696.13	chr17	-	5683	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	9.36416040016402	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGCCTGTTTGATGA	NA	False	NA	NA	False	CATAAA	-35	NA	23086079	23066455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ENSMUST00000088716.12	chr9	+	5717	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	0	0	0	0	multi-exon	FALSE	canonical	3	994	junction_27	99.253261289205	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATTCTCTGCATTCAT	2445	False	NA	24	True	AATAAA	-24	NA	109961047	110069246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ENSMUST00000088717.7	chr15	+	3302	20	FSM	ENSMUSG00000008690.16	ENSMUST00000088717.7	3302	20	0	0	0	0	multi-exon	FALSE	canonical	1	166	junction_15	242.636453884124	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239938	89257029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000088717.7-0	chr15	+	2012	20	FSM	ENSMUSG00000008690.16	ENSMUST00000088717.7	3302	20	27	1263	0	0	multi-exon	FALSE	canonical	1	166	junction_15	242.636453884124	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGCTACCCCACCT	NA	False	NA	-2	True	NA	NA	NA	89239965	89255766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000088737.11	chr19	-	3376	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	False	NA	-9	True	TATAAA	-13	NA	4356250	4336029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUST00000088737.11-0	chr19	-	2397	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	-56	1035	-56	-418	multi-exon	FALSE	canonical	3	202	junction_18	28.8679753360017	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTATTTGTTTTCCC	NA	False	NA	-29	True	TATAAA	-22	NA	4356306	4337064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUST00000088763.13	chr17	+	2935	7	FSM	ENSMUSG00000071266.14	ENSMUST00000088763.13	2935	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	23.5849528301415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGTTGTTTTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	22643248	22675670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670059_22670134_22672432_22672560_22673404
ENSMUST00000088765.9	chr17	+	2973	4	FSM	ENSMUSG00000044501.18	ENSMUST00000088765.9	2973	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	13.4412301024373	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTCTAGTCATTTATCT	NA	False	NA	24	True	AATAAA	-24	NA	22580433	22596261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_22580689_22590971_22591070_22592623_22592751_22593768
ENSMUST00000088778.5	chrX	-	1232	1	FSM	ENSMUSG00000067924.5	ENSMUST00000088778.5	1232	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGGAAATGGAGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	52672375	52671143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52671100_52672400
ENSMUST00000088779.5	chrX	-	1195	1	FSM	ENSMUSG00000067925.5	ENSMUST00000088779.5	1195	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTCTTACTTAGTATAG	NA	False	NA	NA	False	AATAAA	-25	NA	52645649	52644454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52644500_52645600
ENSMUST00000088784.6	chr1	-	408	1	FSM	ENSMUSG00000079137.4	ENSMUST00000088784.6	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATATTTTTGTTAAAA	3087	False	NA	NA	False	NA	NA	NA	171133067	171132659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171132700_171133100
ENSMUST00000088785.6	chr7	-	1709	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	16.2685791225499	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTGTGTGGCAGTGTAA	9923	False	NA	2	True	AAAACA	-22	NA	29789952	29776761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
ENSMUST00000088787.7	chr17	+	2652	6	FSM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	15.6025638918737	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	21787269	21808961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
ENSMUST00000088788.4	chr15	+	2887	21	FSM	ENSMUSG00000036561.10	ENSMUST00000088788.4	2887	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	6.30555310817378	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCAGTGGAACCAG	NA	False	NA	NA	False	AATAAA	-14	NA	89137237	89170464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ENSMUST00000088811.7	chr17	+	3800	5	FSM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.6405073623181	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTCTTTTGTTTGT	NA	False	NA	13	True	AGTAAA	-24	NA	21229202	21249123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ENSMUST00000088823.5	chr15	-	2461	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	5.74096487412616	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGCTCTGGATCCCAT	NA	False	NA	-13	True	AATAAA	-28	NA	89033831	89026689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
ENSMUST00000088827.8	chr15	-	1808	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	1.87634249459548	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGTGTGGCCCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	89024824	89014786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUST00000088874.10	chrX	+	1728	5	FSM	ENSMUSG00000015217.12	ENSMUST00000088874.10	1728	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	352.060630431748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599595	70604282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70599844_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000088898.11	chrX	-	4024	20	FSM	ENSMUSG00000036916.14	ENSMUST00000088898.11	4024	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	25.0016065965764	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTGCATCATCTAATACG	NA	False	NA	44	True	AATAAA	-22	NA	47683250	47630501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549_47680639_47683209
ENSMUST00000088922.5	chr14	-	1467	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_6	43.0538343595692	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGATGGCAACTGTTATC	NA	False	NA	-17	True	AATAAA	-19	NA	76248305	76134376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ENSMUST00000088935.4	chrX	-	2815	10	FSM	ENSMUSG00000036985.13	ENSMUST00000088935.4	2815	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	39.9113214545311	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCCTGCCTCCTCCTTCC	NA	False	NA	-2	True	ATTAAA	-16	NA	47297755	47260845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297714
ENSMUST00000088940.6	chr17	+	4405	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	216.5692369082	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320744	6358589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ENSMUST00000088970.7	chr14	-	4694	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	23.7891243570067	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	579	False	NA	-1	True	ATTAAA	-20	NA	75185306	74992114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ENSMUST00000088973.11	chrX	-	4798	23	FSM	ENSMUSG00000031099.17	ENSMUST00000088973.11	4798	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	6.17462817162712	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCACTTCTTTGTTGC	NA	False	NA	NA	False	ATTAAA	-19	NA	46981429	46898509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975973_46976076_46981102
ENSMUST00000088976.12	chr2	+	4130	22	FSM	ENSMUSG00000027478.16	ENSMUST00000088976.12	4130	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	27.8880983888474	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491373	153529650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ENSMUST00000089011.6	chr16	+	2872	2	FSM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGTCTTCACCTCTGG	NA	False	NA	17	True	AATAAA	-33	NA	10884193	10892849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10884312_10890095
ENSMUST00000089017.12	chr14	-	6143	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_25	24.1979833870511	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	NA	False	NA	-1	True	AATAAA	-24	NA	72947443	72775385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ENSMUST00000089024.13	chr17	+	1902	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	1038.79458989735	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTGGGTTCCTGTCCT	NA	False	NA	-1	True	ATTAAA	-14	NA	13135215	13143443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUST00000089027.3	chr2	+	3896	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153003222	153052386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUST00000089027.3-0	chr2	+	3651	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	245	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	53.5920770883495	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153003467	153052386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUST00000089049.4	chr14	+	1426	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	210	2290	0	0	multi-exon	FALSE	canonical	3	39	junction_1	3	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGCTTGCCTAAATG	NA	False	NA	NA	False	AGTAAA	-15	NA	70815286	70817721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_70815551_70816351_70816566_70816773
ENSMUST00000089052.11	chr7	-	2344	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	114.601483410993	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGACACGCATTTGC	NA	False	NA	-15	True	AATAAA	-19	NA	101714676	101668358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ENSMUST00000089058.7	chr17	-	5441	27	FSM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	0	0	0	0	multi-exon	FALSE	canonical	2	131	junction_25	36.3765644044325	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGTCTGTTACTGGCT	NA	False	NA	1	True	AATAAA	-23	NA	12537683	12446507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ENSMUST00000089059.9	chr2	+	1743	13	FSM	ENSMUSG00000019188.17	ENSMUST00000089059.9	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	48.170054667466	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGCTCTCAGCAGCTC	NA	False	NA	21	True	ATTAAA	-35	NA	152511407	152546956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546541
ENSMUST00000089062.8	chrX	-	882	4	FSM	ENSMUSG00000068048.9	ENSMUST00000089062.8	882	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	21.013223349966	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGCTCCATTATCTT	1078	False	NA	-1	True	AATAAA	-16	NA	36990647	36987973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36988177_36989156_36989203_36989828_36990289_36990474
ENSMUST00000089084.12	chr16	-	3495	15	FSM	ENSMUSG00000002489.17	ENSMUST00000089084.12	3495	15	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_14	7.23793859479623	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGTTTATAG	NA	False	NA	NA	False	NA	NA	NA	89634763	89584745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646
ENSMUST00000089085.10	chr17	+	3521	22	FSM	ENSMUSG00000023868.18	ENSMUST00000089085.10	7769	22	0	4248	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.87476377952662	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGCAAGCAAATCTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	9020524	9201232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_9020978_9117692_9117822_9139335_9139365_9147923_9148045_9149341_9149392_9159972_9160114_9161703_9161860_9163201_9163253_9163767_9163827_9165627_9165680_9168181_9168325_9170328_9170422_9172568_9172756_9180691_9180835_9181719_9181804_9183396_9183548_9186250_9186407_9188359_9188533_9193554_9193667_9195967_9196049_9197736_9197826_9200364
ENSMUST00000089112.6	chr2	+	980	2	FSM	ENSMUSG00000068079.6	ENSMUST00000089112.6	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTATCCTGGCTAAG	7089	False	NA	NA	False	AATAAA	-17	NA	151985480	151991017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151986059_151990615
ENSMUST00000089119.13	chr17	+	966	9	FSM	ENSMUSG00000094724.9	ENSMUST00000089119.13	1783	9	309	508	-3	0	multi-exon	FALSE	canonical	0	0	junction_3	237.179784130098	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	NA	False	AAAAAG	-11	NA	7246302	7265589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
ENSMUST00000089140.13	chr2	+	1486	10	FSM	ENSMUSG00000027455.17	ENSMUST00000089140.13	1486	10	0	0	0	0	multi-exon	FALSE	canonical	1	251	junction_3	435.093348860014	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATTCTGTTATATAGAAA	NA	False	NA	24	True	AAGAAA	-6	NA	151336101	151353230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344374_151344381_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUST00000089155.6	chr15	-	789	5	FSM	ENSMUSG00000068101.12	ENSMUST00000089155.6	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	529.66121247454	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTGTAGATGCAGA	NA	False	NA	-17	True	AAAAAG	-14	NA	82128928	82118279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82118711_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUST00000089157.11	chr15	-	1202	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	82128949	82117979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUST00000089157.11-0	chr15	-	827	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	75	300	0	0	multi-exon	FALSE	canonical	3	1067	junction_2	108.849253557386	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTGTAGATGCAGA	NA	False	NA	-17	True	AAAAAG	-14	NA	82128874	82118279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUST00000089161.10	chr15	-	1924	3	FSM	ENSMUSG00000068105.12	ENSMUST00000089161.10	1924	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGCCTGGGTGCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	82108554	82105943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82107478_82107919_82108124_82108368
ENSMUST00000089162.5	chr6	+	5817	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTCACTGTGTTTCTCC	NA	False	NA	10	True	ATTAAA	-15	NA	108805634	108836309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ENSMUST00000089162.5-1	chr6	+	2347	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	-110	3580	-77	243	multi-exon	FALSE	canonical	3	297	junction_5	22.3007245184901	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGAAGCTTCGTGGAG	NA	False	NA	NA	False	AATAAA	-32	NA	108805524	108832729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ENSMUST00000089174.6	chr15	+	2046	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.64371047599825	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTCTTTGGCTTCTTTT	NA	False	NA	25	True	AATAAA	-36	NA	82012122	82026404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
ENSMUST00000089184.11	chr11	+	2291	2	FSM	ENSMUSG00000042529.15	ENSMUST00000089184.11	2291	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCTTGCTCTTCTGTTT	NA	False	NA	30	True	AATAAA	-42	NA	60913389	60961957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60913677_60959953
ENSMUST00000089207.13	chr2	-	4127	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCCTGAGACTCTTCA	NA	False	NA	1	True	NA	NA	NA	149978628	149956325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
ENSMUST00000089207.13-0	chr2	-	2339	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	0	1788	0	962	multi-exon	FALSE	canonical	3	35	junction_1	10.2089285540757	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCGTACTTAGGACAAGTT	NA	False	NA	NA	False	NA	NA	NA	149978628	149958113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
ENSMUST00000089217.11	chrX	+	4044	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	0	0	0	0	multi-exon	TRUE	canonical	3	1167	junction_1	494.469940036804	1972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTAAGTTCGCATGTT	NA	False	NA	NA	False	NA	NA	NA	20524564	20549418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUST00000089221.3	chr17	-	720	1	FSM	ENSMUSG00000068141.6	ENSMUST00000089221.3	720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	690	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGCCCTTTTTACCGTG	NA	False	NA	NA	False	NA	NA	NA	3095008	3094288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_3094300_3095000
ENSMUST00000089230.7	chr14	-	4010	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGACTTCATAATAACT	NA	False	NA	NA	False	AATAAA	-22	NA	67309893	67251504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ENSMUST00000089230.7-1	chr14	-	3392	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	0	618	0	0	multi-exon	FALSE	canonical	3	602	junction_4	68.1900032498157	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTGAATTTGTATTTA	NA	False	NA	-8	True	AATAAA	-21	NA	67309893	67252122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ENSMUST00000089236.11	chr14	+	5518	3	FSM	ENSMUSG00000046204.15	ENSMUST00000089236.11	5518	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTGCCCAAGACAGTT	NA	False	NA	NA	False	AATAAA	-15	NA	67148618	67158472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_67148743_67152770_67152900_67153207
ENSMUST00000089287.7	chr6	-	2257	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_17	79.0590861340176	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182608	97160967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ENSMUST00000089289.6	chr16	-	3528	10	FSM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	10.3494497975067	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTATCTAATTTTAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	62667403	62614047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ENSMUST00000089293.11	chr15	-	3388	6	FSM	ENSMUSG00000053411.17	ENSMUST00000089293.11	3388	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	177.465038810465	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTCTGTGTGTCTGG	NA	False	NA	-10	True	ATTAAA	-21	NA	79816840	79800010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUST00000089295.6	chr6	-	2190	6	FSM	ENSMUSG00000046500.9	ENSMUST00000089295.6	2190	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.56124969497314	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGTGATTATTTATTT	NA	False	NA	-28	True	AGTAAA	-26	NA	97037374	96808163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_96809534_96820711_96820837_96840720_96840877_96991332_96991449_96996875_96997016_97037091
ENSMUST00000089302.11	chrX	+	11887	45	FSM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	219.011541405002	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	823	False	NA	NA	False	AATAAA	-16	NA	12937752	13039567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ENSMUST00000089302.11-0	chrX	+	9491	45	FSM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	0	2396	0	1034	multi-exon	FALSE	canonical	3	58	junction_1	219.011541405002	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	823	False	NA	NA	False	AATAGA	-15	NA	12937752	13037171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ENSMUST00000089362.9	chr16	+	4825	24	FSM	ENSMUSG00000052917.16	ENSMUST00000089362.9	4825	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	11.8366321271476	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGACTGCTAGCAATGTA	NA	False	NA	NA	False	ATTAAA	-43	NA	55895830	56010375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55992112_55992247_55993519_55993637_55996159_55996283_55999319_55999413_55999860_55999986_56000888_56000942_56004509_56004554_56005123_56005193_56006421_56006573_56008597
ENSMUST00000089377.6	chr15	+	800	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGATGACACATACTT	NA	False	NA	NA	False	AATAAA	-15	NA	78810924	78814665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
ENSMUST00000089377.6-0	chr15	+	525	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	1	274	0	0	multi-exon	FALSE	canonical	3	1912	junction_2	63.4367576584918	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATCCAGCCCTTTCATG	NA	False	NA	9	True	AATAAA	-20	NA	78810925	78814391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
ENSMUST00000089378.5	chr15	+	2001	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	0	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTGTGTGTGTGCC	NA	False	NA	24	True	AATAAA	-18	NA	78798118	78803717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78798732_78802329
ENSMUST00000089402.10	chrX	-	1839	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_2	6.61857655055493	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGTTTTTTGGTTT	1988	False	NA	-2	True	AATAAA	-17	NA	8072740	8060088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUST00000089403.10	chrX	-	1854	14	FSM	ENSMUSG00000031169.14	ENSMUST00000089403.10	1854	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	24.4748391512445	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGTTTTTTGGTTT	1988	False	NA	-2	True	AATAAA	-17	NA	8072740	8060088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8067896_8067912_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUST00000089430.6	chr4	-	504	1	FSM	ENSMUSG00000068240.6	ENSMUST00000089430.6	504	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATCCAAGGCTACATC	6	True	NA	NA	False	AATAAA	-41	NA	3973595	3973091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_3973100_3973600
ENSMUST00000089449.5	chr6	+	3867	8	FSM	ENSMUSG00000033174.18	ENSMUST00000089449.5	3867	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.18939379960434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTGTCTGCGTGTCTG	NA	False	NA	5	True	AATAAA	-20	NA	88701809	88805342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_88702161_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
ENSMUST00000089461.11	chr2	+	1405	13	FSM	ENSMUSG00000058793.15	ENSMUST00000089461.11	8073	13	0	6668	0	54	multi-exon	FALSE	canonical	2	123	junction_1	89.520132744912	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACCGTCATTTTTTTT	NA	False	NA	9	True	AATGAA	-11	NA	132127858	132147302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ENSMUST00000089473.5	chr14	-	5186	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAATCTGTTACAGGTG	NA	False	NA	58	True	NA	NA	NA	58127733	58070159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ENSMUST00000089473.5-0	chr14	-	2861	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	0	2325	0	664	multi-exon	FALSE	canonical	3	200	junction_2	22.1702691308277	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127733	58072484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ENSMUST00000089482.12	chr14	-	3456	23	FSM	ENSMUSG00000021952.17	ENSMUST00000089482.12	3456	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	74.741551942523	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACAGAGCTATAAGCTT	NA	False	NA	NA	False	NA	NA	NA	57902413	57819727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855704_57866816_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ENSMUST00000089497.7	chr6	-	1608	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	51	4178	0	3061	multi-exon	FALSE	canonical	3	216	junction_5	30.4276190327143	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCCTAGAGCTTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	87815729	87795428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ENSMUST00000089501.5	chr6	-	1209	1	FSM	ENSMUSG00000068262.5	ENSMUST00000089501.5	1209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCAGGACCACTTTGT	2100	False	NA	NA	False	AAGAAA	-28	NA	87743186	87741977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87742000_87743200
ENSMUST00000089558.7	chr6	+	396	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	238	421	0	0	multi-exon	FALSE	canonical	3	2623	junction_2	545.029866663796	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTTCTGCTGTTGTGGA	NA	False	NA	29	True	AATAAA	-20	NA	86348523	86355889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
ENSMUST00000089559.11	chr2	-	1238	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	130.411607995608	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGCCAGAAGTCCCACT	NA	False	NA	71	True	AATAAA	-18	NA	130506579	130495879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
ENSMUST00000089581.11	chr2	-	3496	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	6.9940450861191	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATTGAAGAGTTTAAAA	8057	False	NA	NA	False	AATAAA	-22	NA	130266198	130259602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
ENSMUST00000089622.11	chr6	-	10904	11	FSM	ENSMUSG00000034832.16	ENSMUST00000089622.11	10904	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	2.99332590941915	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTAAGCTTTTTTTT	NA	False	NA	2	True	AATAAA	-27	NA	83418657	83339354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83346808_83347364_83347702_83350175_83350314_83350764_83350855_83352731_83352883_83353747_83353957_83356853_83356948_83362966_83363058_83379648_83381807_83418198_83418256_83418531
ENSMUST00000089641.6	chr6	-	1236	3	FSM	ENSMUSG00000068327.6	ENSMUST00000089641.6	1236	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	3	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCCCGCTGA	7176	False	NA	NA	False	NA	NA	NA	83047274	83045571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83045956_83046034_83046273_83046660
ENSMUST00000089645.13	chr6	-	1725	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_7	63.5991913695225	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	1897	False	NA	2	True	AATAAA	-31	NA	83031552	83028246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUST00000089651.6	chr6	-	1807	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.31507290636732	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCTGCGTATGAATGAG	NA	False	NA	-4	True	ATTAAA	-19	NA	83010452	83007914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
ENSMUST00000089680.10	chr15	-	973	8	FSM	ENSMUSG00000055762.17	ENSMUST00000089680.10	973	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	1574.61569007443	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCGCCTCTTGTGTTAC	NA	False	NA	-8	True	ATTAAA	-14	NA	75781168	75767338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772980_75773102_75781093
ENSMUST00000089688.6	chr14	+	2596	10	FSM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.50644964149505	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	54669068	54678722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUST00000089689.5	chr15	-	408	3	FSM	ENSMUSG00000068348.5	ENSMUST00000089689.5	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	2	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGTCCTTCCAACAACC	1352	False	NA	NA	False	NA	NA	NA	75110617	75107445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75107668_75109440_75109558_75110548
ENSMUST00000089752.11	chr14	-	8190	37	FSM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	11.1582334103345	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTCTTCCTATGTTCTG	NA	False	NA	-9	True	AATAAA	-17	NA	52475029	52435607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186
ENSMUST00000089759.9	chr16	+	1711	7	FSM	ENSMUSG00000046598.16	ENSMUST00000089759.9	1711	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	185.763888369678	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGTGCATGAAA	5509	False	NA	25	True	AGTAAA	-15	NA	31241097	31276315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31241331_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ENSMUST00000089765.9	chr15	+	871	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	8	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCTTCATTGAAGTGG	NA	False	NA	7	True	ATTAAA	-18	NA	72962240	72965924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_72962433_72964681_72964809_72965372
ENSMUST00000089770.11	chr15	-	4048	22	FSM	ENSMUSG00000047921.18	ENSMUST00000089770.11	4048	22	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	34.9692446667405	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72933053	72461468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_72462012_72462464_72462689_72557131_72557223_72565352_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ENSMUST00000089776.3	chr2	-	5768	28	FSM	ENSMUSG00000068394.5	ENSMUST00000089776.3	5768	28	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_22	10.571073713266	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	0	True	AATAAA	-18	NA	125467033	125405007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456352_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ENSMUST00000089785.5	chr15	+	483	1	FSM	ENSMUSG00000068397.5	ENSMUST00000089785.5	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	777	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACACAAAGAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	68181667	68182150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_68181700_68182200
ENSMUST00000089860.12	chr6	-	4291	18	FSM	ENSMUSG00000037709.14	ENSMUST00000089860.12	5786	18	45	1450	0	-1450	multi-exon	FALSE	canonical	1	1	junction_14	2.83331637148054	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCATGGTTTCCTTCAT	NA	False	NA	NA	False	AATAAA	-34	NA	59001489	58910524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960873_58961061_58964140_58964318_58966728_58966771_58980449_58980492_59001296
ENSMUST00000089874.9	chr18	-	7858	19	FSM	ENSMUSG00000071856.11	ENSMUST00000089874.9	7858	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	3.48409082672781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTGGATTTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	44945249	44558126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44857531_44857744_44892242_44892488_44945105
ENSMUST00000089906.7	chr5	-	1356	5	FSM	ENSMUSG00000072774.11	ENSMUST00000089906.7	1356	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	100.832782367641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCCCTATGCATGTAA	5862	False	NA	NA	False	NA	NA	NA	104976823	104962208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_104976793
ENSMUST00000089926.6	chr2	-	4198	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGGCACATGCCCATA	NA	False	NA	NA	False	AATAAA	-19	NA	121337146	121322391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUST00000089926.6-0	chr2	-	3364	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	0	834	0	-834	multi-exon	FALSE	canonical	3	409	junction_6	26.8747093007534	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGATTTATTTGGTGGTC	NA	False	NA	NA	False	NA	NA	NA	121337146	121323225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUST00000089950.11	chr3	-	1381	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_5	268.62508724987	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6100	False	NA	-2	True	AATAAA	-15	NA	153618646	153612925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUST00000089959.7	chr14	-	2775	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTGGATGTTGTCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	47426870	47391351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
ENSMUST00000089959.7-0	chr14	-	1040	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	0	1735	0	-1735	multi-exon	FALSE	canonical	3	47	junction_1	5.3665631459995	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTGAGCTTCCGCTTTC	NA	False	NA	-3	True	AATAAA	-12	NA	47426870	47393086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
ENSMUST00000089982.11	chr3	+	4197	14	FSM	ENSMUSG00000039068.17	ENSMUST00000089982.11	4197	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	76.161382688458	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152102320	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUST00000090002.10	chr6	-	1662	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	2567.02803044511	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000090006.12	chr8	+	3815	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	0	0	0	0	multi-exon	TRUE	canonical	3	487	junction_6	37.7685348169905	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTGGCTCTGTATT	NA	False	NA	16	True	AATAAA	-22	NA	129412134	129459681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUST00000090020.13	chr11	+	3771	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	33.8534762061397	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTGACCACTCATTGAA	9941	False	NA	22	True	AATAAA	-18	NA	96941453	96959730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ENSMUST00000090023.13	chr16	+	2080	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	799.773617969485	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGGGTCTTG	1353	False	NA	17	True	NA	NA	NA	20354227	20362806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUST00000090024.11	chr14	-	7509	11	FSM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	23.4444023169711	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCTCCACAGCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	36690734	36596892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ENSMUST00000090025.5	chr15	+	1348	2	FSM	ENSMUSG00000068522.5	ENSMUST00000090025.5	1348	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTCTAGTGGTCAT	NA	False	NA	16	True	AATAAA	-27	NA	51903502	51909118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_51903927_51908194
ENSMUST00000090027.11	chr14	+	4185	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCAGCTTAGCTACTGA	NA	False	NA	NA	False	NA	NA	NA	34396129	34468037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ENSMUST00000090027.11-0	chr14	+	6333	19	FSM	ENSMUSG00000041408.19	ENSMUST00000090027.11	4185	19	-245	-1903	0	0	multi-exon	FALSE	canonical	3	148	junction_3	211.44655367664	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395884	34469940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416961_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ENSMUST00000090031.12	chr3	+	593	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGGGTACTAATCTTT	NA	False	NA	26	True	AATAAA	-39	NA	146205561	146211327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_146205776_146209014_146209155_146211088
ENSMUST00000090031.12-0	chr3	+	485	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	83	25	0	0	multi-exon	FALSE	canonical	3	3573	junction_2	41.5	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCCTCCTTACTGATG	NA	False	NA	1	True	AATAAA	-14	NA	146205644	146211302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_146205776_146209014_146209155_146211088
ENSMUST00000090042.12	chr2	-	2874	20	FSM	ENSMUSG00000033808.17	ENSMUST00000090042.12	2874	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	102.185508348021	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234550	120185792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204391_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUST00000090046.12	chr2	-	2897	20	FSM	ENSMUSG00000033808.17	ENSMUST00000090046.12	2897	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	114.209531889923	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTCTCATTTAT	NA	False	NA	NA	False	TATAAA	-14	NA	120234570	120185792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204968_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUST00000090052.11	chr16	+	5997	30	FSM	ENSMUSG00000041215.17	ENSMUST00000090052.11	5997	30	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	34.7469534332064	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959812	20051323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ENSMUST00000090071.5	chr2	-	4477	20	FSM	ENSMUSG00000050211.15	ENSMUST00000090071.5	4477	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	6.9306017774238	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTCATCTGTTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	120075816	119996892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119998532_119998952_119999137_120000509_120000677_120001588_120001793_120002198_120002307_120004133_120004272_120004733_120004849_120007202_120007426_120011897_120012035_120013184_120013321_120015051_120015090_120015480_120015568_120015669_120015831_120016827_120016892_120017676_120017720_120018990_120019032_120019884_120020017_120021674_120021812_120030693_120030767_120075166
ENSMUST00000090086.11	chr16	+	1420	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	-10	2139	0	0	multi-exon	FALSE	canonical	3	212	junction_1	38.76564858485	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTCAAGGTGGGAAC	NA	False	NA	15	True	AATAAA	-17	NA	18317627	18383290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUST00000090096.11	chr15	+	4515	16	FSM	ENSMUSG00000022307.17	ENSMUST00000090096.11	4515	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	96.1974820645299	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTTTGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	41310877	41724441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUST00000090147.7	chr14	+	2324	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	7.40870359029762	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTATTCTGTCTGA	NA	False	NA	NA	False	AAAACA	-6	NA	31363013	31390536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
ENSMUST00000090174.11	chr2	+	2008	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	26.2152627299442	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGATGTTTTTTCTGTC	4288	False	NA	8	True	NA	NA	NA	119039114	119047530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ENSMUST00000090178.10	chr3	+	1287	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	212	7978	0	-350	multi-exon	FALSE	canonical	3	31	junction_3	5.20204041600946	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGGACTGTTAATGA	NA	False	NA	13	True	ATTAAA	-26	NA	137573647	137614340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
ENSMUST00000090190.14	chr16	+	6354	3	FSM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	2.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTCTGTGACTATAC	6311	False	NA	17	True	ATTAAA	-19	NA	17051435	17081294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17051595_17072831_17072931_17075198
ENSMUST00000090192.12	chr16	-	2609	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	0	0	0	0	multi-exon	FALSE	canonical	3	1494	junction_3	290.114153777823	457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTGTATGGGTTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	17019356	16969878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUST00000090205.5	chr14	-	426	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATAAAAATATTTTAA	NA	False	NA	NA	False	NA	NA	NA	30850860	30846635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30846791_30850589
ENSMUST00000090212.5	chr14	+	1407	13	FSM	ENSMUSG00000071547.5	ENSMUST00000090212.5	1407	13	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_6	37.8229611332705	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCTGCTTCATTCCA	NA	False	NA	17	True	AATAAA	-19	NA	30856809	30861078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUST00000090214.11	chr14	+	6212	30	FSM	ENSMUSG00000042323.18	ENSMUST00000090214.11	6212	30	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_25	40.7196850028347	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	3662	False	NA	NA	False	AAGAAA	-28	NA	30747467	30841998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ENSMUST00000090227.6	chr15	-	6260	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	16.0775122453693	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGGCTGTGTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	31531199	31456036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ENSMUST00000090243.8	chr6	-	4030	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_14	38.6108925098626	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354609	39311706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ENSMUST00000090243.8-0	chr6	-	2814	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	0	1216	0	0	multi-exon	FALSE	canonical	3	160	junction_14	38.6108925098626	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCCCTGCTTAAGCTT	NA	False	NA	-11	True	AATAAA	-22	NA	39354609	39312922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ENSMUST00000090292.13	chr15	+	4519	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	95.4793814587056	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	53	False	NA	30	True	ATTAAA	-20	NA	12824948	12935377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ENSMUST00000090300.6	chr16	-	7751	27	FSM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_23	10.0957692234429	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTAATGAGTGCTTTTGT	9816	False	NA	-6	True	AATAAA	-16	NA	13977131	13927036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ENSMUST00000090300.6-0	chr16	-	5429	27	FSM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	0	2322	0	-2322	multi-exon	FALSE	canonical	2	10	junction_23	10.0957692234429	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGTCTGACTCTACA	9816	False	NA	NA	False	ATTAAA	-12	NA	13977131	13929358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ENSMUST00000090339.11	chr15	-	4909	18	FSM	ENSMUSG00000022246.15	ENSMUST00000090339.11	4909	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	46.4744600025213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGTGGTGTTTGTGA	9924	False	NA	-3	True	AATAAA	-26	NA	10713626	10569054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10713431
ENSMUST00000090379.7	chr3	-	5833	16	FSM	ENSMUSG00000039701.12	ENSMUST00000090379.7	6185	16	39	313	0	-313	multi-exon	FALSE	canonical	3	36	junction_5	6.61177400971597	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTATAGCTGGTCTTTTC	NA	False	NA	NA	False	AAAACA	-22	NA	122778120	122725454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_122728245_122729636_122729734_122741009_122741087_122742772_122743506_122744819_122744964_122746205_122746356_122746828_122746992_122750347_122750498_122751233_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122777930
ENSMUST00000090398.11	chr14	-	7851	32	FSM	ENSMUSG00000021782.15	ENSMUST00000090398.11	7851	32	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_27	24.1232527147577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	False	NA	-6	True	AATAAA	-14	NA	24295988	24184022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ENSMUST00000090398.11-0	chr14	-	6314	32	FSM	ENSMUSG00000021782.15	ENSMUST00000090398.11	7851	32	241	1296	241	-1296	multi-exon	FALSE	canonical	3	63	junction_27	24.1232527147577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTCTATGTTTACT	NA	False	NA	NA	False	NA	NA	NA	24295747	24185318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ENSMUST00000090413.6	chr5	+	1629	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	572	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGTAATACCTATT	NA	False	NA	20	True	AATAAA	-22	NA	88702320	88703949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_88702300_88703900
ENSMUST00000090414.11	chr7	-	2221	13	FSM	ENSMUSG00000031027.16	ENSMUST00000090414.11	2221	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	21.6042369815635	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCAGTCCCTCACGTGT	NA	False	NA	-14	True	AATAAA	-26	NA	109038288	108878429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108939575_108939687_108940495_108940847_109038123
ENSMUST00000090433.6	chr11	+	4654	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_5	24.9420662068455	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCCTTTTCTTCTTGG	NA	False	NA	8	True	AATAAA	-18	NA	117006063	117050094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ENSMUST00000090443.10	chr11	-	4004	20	FSM	ENSMUSG00000057897.15	ENSMUST00000090443.10	4004	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	42.1055921039782	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAATAAAAAAAAAAAAAAAA	2874	False	NA	NA	False	NA	NA	NA	6015748	5919671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932759_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUST00000090464.7	chr3	-	4485	16	FSM	ENSMUSG00000033502.16	ENSMUST00000090464.7	4485	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	3.61232458243842	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGGCATTCATTAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	116217681	116066201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_116068358_116087374_116087736_116088399_116088523_116090779_116090828_116092085_116092199_116101788_116101949_116115730_116115870_116122127_116122359_116126443_116126532_116142102_116142166_116144854_116144922_116160275_116160356_116186470_116186564_116198191_116198268_116216215_116216307_116217085
ENSMUST00000090481.14	chr6	+	2670	7	FSM	ENSMUSG00000029767.17	ENSMUST00000090481.14	2670	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	301.970979105977	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCACCTTAGCCATTGCA	-1	True	NA	NA	False	NA	NA	NA	29348117	29376128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29348208_29356469_29356697_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUST00000090488.4	chr15	-	482	1	FSM	ENSMUSG00000068706.4	ENSMUST00000090488.4	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCCTGGGACGGAGCC	NA	False	NA	NA	False	NA	NA	NA	5150617	5150135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_5150100_5150600
ENSMUST00000090499.13	chr14	+	2370	14	FSM	ENSMUSG00000039599.17	ENSMUST00000090499.13	2370	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	83.3254828649349	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTATTACATTTTAGA	NA	False	NA	11	True	AATAAA	-20	NA	20398289	20433559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ENSMUST00000090500.10	chr16	-	3698	6	FSM	ENSMUSG00000022519.15	ENSMUST00000090500.10	3698	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.9498953970317	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGCCTTGGCCTTCTTG	NA	False	NA	-3	True	AATAAA	-15	NA	4340939	4298079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311742_4340856
ENSMUST00000090511.4	chr6	-	4650	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAACTCTTGTTTTTAT	-13	True	NA	NA	False	AATAAA	-16	NA	28421723	28416089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_28419300_28420283
ENSMUST00000090522.5	chr16	-	5668	3	FSM	ENSMUSG00000039789.8	ENSMUST00000090522.5	5668	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	9.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATACTTCAAGAATTT	NA	False	NA	15	True	AATAAA	-33	NA	3690260	3679391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_3684595_3689013_3689141_3689922
ENSMUST00000090541.12	chr11	-	580	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	0	4135	0	0	multi-exon	FALSE	canonical	3	2808	junction_4	3276.79938163751	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGCCTGTC	3479	False	NA	-6	True	NA	NA	NA	95966496	95963812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
ENSMUST00000090543.6	chr14	+	4663	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	14.9229312653721	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGTTTTGTTCTCTG	NA	False	NA	28	True	TATAAA	-18	NA	4230568	4265642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ENSMUST00000090546.6	chr3	-	2864	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	15	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5274	False	NA	-14	True	AATAAA	-15	NA	108469782	108463740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108466277_108467502_108467635_108469586
ENSMUST00000090553.12	chr3	-	1823	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	0	1747	0	0	multi-exon	FALSE	canonical	3	2549	junction_7	105.882198692698	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352514	108333927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUST00000090554.11	chr2	+	2654	8	FSM	ENSMUSG00000068735.15	ENSMUST00000090554.11	2654	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	50.0424309757148	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAATCTGCGTGGTGT	NA	False	NA	10	True	AAGAAA	-43	NA	93017928	93032094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ENSMUST00000090559.12	chr2	-	3976	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	10.1019595513375	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	AGTAAA	-2	NA	92264388	92233990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ENSMUST00000090561.10	chr3	+	1686	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	57.4402973103556	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	7032	False	NA	16	True	AATAAA	-24	NA	108291154	108295495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUST00000090569.10	chr3	+	1000	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	239	0	239	0	multi-exon	FALSE	canonical	3	2544	junction_4	248.775972262194	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGTCTGTGATC	NA	False	NA	11	True	AATAAA	-15	NA	108164480	108187290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ENSMUST00000090582.11	chr2	-	2291	14	FSM	ENSMUSG00000040434.17	ENSMUST00000090582.11	2291	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	42.5506311706155	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTCAATTTTTTTTA	NA	False	NA	-25	True	GGGGCT	-23	NA	92201378	92195415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199834_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
ENSMUST00000090601.12	chr6	-	5183	23	FSM	ENSMUSG00000000416.17	ENSMUST00000090601.12	5183	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	3.78366432211941	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTGTAAAGAATGTATT	11	True	NA	NA	False	TATAAA	-26	NA	18514820	18367219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_18367616_18374522_18374622_18375935_18376069_18378365_18378430_18380461_18380639_18380966_18381173_18382744_18382924_18388026_18388215_18389081_18389235_18397331_18397432_18397516_18397604_18405182_18405263_18406454_18406551_18408480_18408757_18414180_18414299_18420764_18421017_18423829_18423981_18426034_18426135_18427437_18427642_18433818_18435446_18448246_18448469_18501947_18502056_18514653
ENSMUST00000090602.6	chr2	-	714	5	FSM	ENSMUSG00000027239.15	ENSMUST00000090602.6	714	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_4	939.630878324036	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCACGCCCACACCAAG	NA	False	NA	NA	False	NA	NA	NA	91762044	91760310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761878
ENSMUST00000090608.6	chr2	+	2308	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	26	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAACT	3442	False	NA	NA	False	NA	NA	NA	91541266	91551890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91541597_91542424_91543211_91550698
ENSMUST00000090614.11	chr2	+	2866	14	FSM	ENSMUSG00000027247.17	ENSMUST00000090614.11	2866	14	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_2	93.668116113923	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91480598_91482108_91482169_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUST00000090632.11	chr6	+	3985	16	FSM	ENSMUSG00000029629.18	ENSMUST00000090632.11	3985	16	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	26.0421879947818	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTCTGTTTGTGTTACT	8	True	NA	NA	False	ATTAAA	-32	NA	11925913	12008080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ENSMUST00000090678.11	chr3	-	2407	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	0	0	0	0	multi-exon	TRUE	canonical	3	409	junction_7	23.7667234354495	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTCCCTTCTCTTTAT	NA	False	NA	-18	True	AATAAA	-12	NA	105708652	105634582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ENSMUST00000090678.11-0	chr3	-	1360	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	0	1047	0	0	multi-exon	FALSE	canonical	3	409	junction_7	23.7667234354495	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGATGATTAAATTTT	NA	False	NA	40	True	ATTAAA	-9	NA	105708652	105635629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ENSMUST00000090680.11	chr3	-	2905	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	22.5302019520465	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTTATTCTGTCGAG	NA	False	NA	0	True	AATAAA	-23	NA	105594890	105585585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ENSMUST00000090682.4	chr2	+	2437	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	4.10960933531265	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTGTTGACT	2338	False	NA	NA	False	AATAAA	-42	NA	90735086	90740905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
ENSMUST00000090685.11	chr3	+	3006	18	FSM	ENSMUSG00000058388.15	ENSMUST00000090685.11	3006	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	21.1329618398503	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875761	103914806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ENSMUST00000090726.6	chr2	+	2583	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	6.42693982821961	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	False	NA	9	True	AATAAA	-20	NA	84767007	84788853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
ENSMUST00000090731.7	chr17	+	885	1	FSM	ENSMUSG00000071035.6	ENSMUST00000090731.7	885	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCCTGCATTGTTTTT	NA	False	NA	NA	False	AAAACA	-12	NA	87385698	87386583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87385700_87386600
ENSMUST00000090749.13	chr11	+	746	5	FSM	ENSMUSG00000071866.13	ENSMUST00000090749.13	746	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	16065.018555467	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCCTTGTTTGTATTGG	NA	False	NA	0	True	AATAAA	-17	NA	6365869	6369815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6365985_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUST00000090759.5	chr3	+	1754	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	0	0	0	0	multi-exon	FALSE	canonical	3	1030	junction_1	83.6891662236509	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTTTTGCCTGTGTGT	NA	False	NA	11	True	NA	NA	NA	97066092	97083890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ENSMUST00000090792.11	chr2	+	1140	10	FSM	ENSMUSG00000059005.14	ENSMUST00000090792.11	1140	10	0	0	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	2101.42958982395	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACAGAAACGGTAGG	7532	False	NA	-60	True	NA	NA	NA	75489661	75495630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577
ENSMUST00000090804.12	chr3	+	4325	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	84.9941174435031	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341700	95404551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ENSMUST00000090811.11	chr2	+	3309	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	26.8791702981764	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGATCTTTGATAAA	NA	False	NA	NA	False	AATAAA	-30	NA	73142944	73168162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ENSMUST00000090821.10	chr3	+	3933	20	FSM	ENSMUSG00000038777.20	ENSMUST00000090821.10	3933	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.282202244812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067815	95081335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95068024_95069925_95069975_95070742_95070833_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ENSMUST00000090823.8	chr3	+	4029	21	FSM	ENSMUSG00000038777.20	ENSMUST00000090823.8	4029	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.1799238656651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067815	95081335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95068024_95069925_95069975_95070742_95070833_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ENSMUST00000090824.12	chr2	+	3334	20	FSM	ENSMUSG00000004085.15	ENSMUST00000090824.12	3334	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	12.7949955590981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATTGTATGGTGGCTA	3234	False	NA	NA	False	AATAAA	-22	NA	72115980	72272954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72240492_72240538_72242273_72242305_72242414_72242555_72246884_72246948_72248298_72248392_72263711_72263829_72265574_72265650_72268545_72268697_72271575
ENSMUST00000090827.12	chr11	-	2419	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	98291316	98279502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
ENSMUST00000090827.12-0	chr11	-	2366	8	FSM	ENSMUSG00000038208.14	ENSMUST00000090827.12	2419	8	53	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	8.7084289452161	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTCTGCTACTCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	98291263	98279502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98280928_98281112_98281318_98281502_98281640_98281905_98281968_98282520_98282584_98288721_98288875_98289710_98289809_98291040
ENSMUST00000090839.12	chr3	+	1712	12	FSM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	7.58314791042644	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATCACTCTGTGACG	2654	False	NA	NA	False	AATAAA	-14	NA	94840366	94852069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94840474_94844007_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
ENSMUST00000090840.10	chrX	-	3867	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTTAAAAACTTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	162741594	162733381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ENSMUST00000090840.10-0	chrX	-	1703	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	-63	2227	0	978	multi-exon	FALSE	canonical	3	635	junction_1	78.6924392810389	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741657	162735608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ENSMUST00000090852.11	chr2	+	2001	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	0	0	0	0	multi-exon	FALSE	canonical	3	1543	junction_7	118.150135613357	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGCCAAACATT	NA	False	NA	-38	True	NA	NA	NA	69691905	69702130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUST00000090858.10	chr2	+	6127	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	0	0	0	0	multi-exon	TRUE	canonical	3	282	junction_1	41.7748260879032	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGATTGTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	69553148	69584356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ENSMUST00000090858.10-0	chr2	+	2679	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	49	3399	0	1065	multi-exon	FALSE	canonical	3	282	junction_1	41.7748260879032	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTGGTGTAATACTG	NA	False	NA	NA	False	AATAAA	-21	NA	69553197	69580957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ENSMUST00000090908.11	chr3	-	3466	25	FSM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	-63	226	0	0	multi-exon	FALSE	canonical	3	158	junction_17	264.856079891619	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000090925.13	chr2	-	7576	34	FSM	ENSMUSG00000026987.17	ENSMUST00000090925.13	7576	34	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	44.8155079416279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCACATAGATCAGAGTTC	NA	False	NA	37	True	NA	NA	NA	59836531	59729788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386
ENSMUST00000090927.12	chr3	+	2128	13	FSM	ENSMUSG00000068917.13	ENSMUST00000090927.12	2128	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	141.611043001596	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072124	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89072414_89074341_89074512_89076004_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ENSMUST00000090945.5	chr3	-	2742	4	FSM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	0	1825	0	946	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGAAAGCCACGTG	NA	False	NA	NA	False	NA	NA	NA	88679906	88653832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597
ENSMUST00000090973.12	chr3	+	6126	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1.4142135623731	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGCTTTCTTCTA	NA	False	NA	10	True	AATAAA	-20	NA	87878399	87887758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
ENSMUST00000090976.10	chr2	-	1153	7	FSM	ENSMUSG00000026761.13	ENSMUST00000090976.10	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	170.808290847436	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGACAGACTTTGGGTT	NA	False	NA	NA	False	NA	NA	NA	48839246	48821969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_48822610_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000090993.8	chr2	+	963	4	FSM	ENSMUSG00000026755.15	ENSMUST00000090993.8	752	4	-16	-195	0	195	multi-exon	FALSE	canonical	3	442	junction_1	241.831897537663	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCATCGCGGTGTGTTCT	NA	False	NA	17	True	AATAAA	-19	NA	38898152	38905600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_38898337_38903128_38903200_38903734_38903912_38905069
ENSMUST00000091002.8	chr3	-	4162	12	FSM	ENSMUSG00000041842.16	ENSMUST00000091002.8	4162	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2.90624861148105	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGAGTGAAATGCCTCC	NA	False	NA	NA	False	AATAAA	-20	NA	84386798	84351341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_84353838_84356056_84356222_84358676_84358795_84360823_84360895_84362093_84362202_84362294_84362366_84364301_84364403_84364492_84364579_84371578_84371682_84372728_84372791_84381446_84382085_84386655
ENSMUST00000091010.12	chr2	+	6455	16	FSM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	68.7589670919769	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGCCTGACTTGCCT	8522	False	NA	4	True	ATTAAA	-14	NA	35512048	35620999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ENSMUST00000091014.10	chr3	+	6218	14	FSM	ENSMUSG00000033900.14	ENSMUST00000091014.10	6218	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	2.99111109157286	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTAACTGACGTTTTT	NA	False	NA	5	True	AATAAA	-17	NA	82265378	82302575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_82265563_82266281_82266432_82267196_82267282_82270597_82270922_82278485_82278710_82281414_82281509_82284229_82284475_82286243_82286315_82287384_82287554_82289200_82289291_82290514_82290677_82290822_82290969_82291151_82291285_82298434
ENSMUST00000091020.10	chr2	-	1838	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	107.582336764329	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGTTCTTTGAAATT	9196	False	NA	-4	True	ATTAAA	-14	NA	34716247	34695350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
ENSMUST00000091037.3	chr2	-	6510	2	FSM	ENSMUSG00000068966.11	ENSMUST00000091037.3	6510	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGGTCTCTGTGTT	NA	False	NA	0	True	AATAAA	-18	NA	33318234	33296119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33302508_33318112
ENSMUST00000091039.5	chr2	-	2738	20	FSM	ENSMUSG00000038831.17	ENSMUST00000091039.5	2738	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	10.7559170084433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGTGTCTTGTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	33261490	33026984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ENSMUST00000091039.5-0	chr2	-	6302	20	FSM	ENSMUSG00000038831.17	ENSMUST00000091039.5	2738	20	-8	-3556	0	0	multi-exon	FALSE	canonical	2	6	junction_8	10.7559170084433	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTCTATTTATTAGTGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	33261498	33023428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ENSMUST00000091064.8	chr4	+	1618	1	FSM	ENSMUSG00000070934.7	ENSMUST00000091064.8	1618	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	501	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTGAAATAATTTGC	NA	False	NA	19	True	AATAAA	-19	NA	86493904	86495522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_86493900_86495500
ENSMUST00000091087.13	chr9	+	3450	20	FSM	ENSMUSG00000033335.18	ENSMUST00000091087.13	3450	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	221.967630092463	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTACTGGTGGCTACGTG	5905	False	NA	6	True	AATAAA	-16	NA	21336266	21418422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUST00000091089.12	chr2	-	3764	21	FSM	ENSMUSG00000026825.18	ENSMUST00000091089.12	3764	21	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	4.4144648599802	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGTACCTCTGCTGGT	NA	False	NA	2	True	AATAAA	-24	NA	32243296	32198482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32199650_32202138_32202355_32202695_32202938_32204901_32205073_32205347_32205360_32205810_32205923_32206909_32207020_32210515_32210630_32213433_32213486_32213671_32213743_32217972_32218060_32224693_32224833_32225787_32225856_32225949_32226086_32226195_32226339_32227745_32227907_32228012_32228112_32229932_32230137_32230427_32230578_32230844_32230919_32243060
ENSMUST00000091130.5	chr3	+	1488	1	FSM	ENSMUSG00000069014.5	ENSMUST00000091130.5	1488	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5541	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAATGT	5440	False	NA	NA	False	NA	NA	NA	54388858	54390346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_54388900_54390300
ENSMUST00000091142.4	chr2	+	1205	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	53	938	0	0	multi-exon	FALSE	canonical	3	254	junction_1	41.2158949921023	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTTACTAGCCTTGCT	NA	False	NA	14	True	AATAAA	-16	NA	29717406	29734076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
ENSMUST00000091184.9	chr3	+	1615	6	FSM	ENSMUSG00000069041.9	ENSMUST00000091184.9	2128	6	0	513	0	-513	multi-exon	FALSE	canonical	3	17	junction_3	1.93907194296653	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAACTATTGTAATGAG	NA	False	NA	NA	False	AATAAA	-6	NA	40663284	40680014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40663657_40670945_40671074_40674920_40675039_40675936_40676092_40677055_40677182_40679298
ENSMUST00000091186.7	chr3	+	6387	16	FSM	ENSMUSG00000060798.8	ENSMUST00000091186.7	6387	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	25.5603860169078	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCAGTATTATGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	40594915	40659204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40595159_40608135_40608684_40618689_40618776_40627000_40627205_40629655_40629775_40633312_40633403_40633961_40634040_40637786_40637977_40642205_40642260_40645125_40645189_40646144_40646367_40646928_40647400_40648590_40648689_40651913_40652104_40654068_40654227_40655631
ENSMUST00000091201.7	chr13	+	3364	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCTGACTGACTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	113931040	114293997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ENSMUST00000091201.7-0	chr13	+	2579	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	0	785	0	676	multi-exon	FALSE	canonical	3	349	junction_1	23.636571240347	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTCCCTGCAAGTT	NA	False	NA	NA	False	AATAAA	-27	NA	113931040	114293212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ENSMUST00000091236.11	chr13	-	3299	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	235.263031976713	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTTTCCAAACAAATTC	NA	False	NA	NA	False	ACTAAA	-35	NA	111626562	111562465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUST00000091237.12	chr8	+	7443	29	FSM	ENSMUSG00000031441.16	ENSMUST00000091237.12	7443	29	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_28	15.8999983955846	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGAGGTTTATTTTGCGT	NA	False	NA	1	True	ATTAAA	-15	NA	12807015	12918728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12914919
ENSMUST00000091246.11	chr11	-	2768	13	FSM	ENSMUSG00000032633.13	ENSMUST00000091246.11	2768	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	78.0128194593683	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGAATGTTGAAACACAA	NA	False	NA	-45	True	NA	NA	NA	59700414	59682615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700344
ENSMUST00000091252.5	chr2	-	8737	30	FSM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	23.0104665219992	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTATGGCTTCCTTTGTG	NA	False	NA	-2	True	AATAAA	-25	NA	26335228	26299444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ENSMUST00000091257.11	chr3	+	4562	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	42.8432404539521	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTATCTCAGTTAGTGA	NA	False	NA	NA	False	AATAAA	-29	NA	32583613	32633388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ENSMUST00000091269.11	chr13	-	6224	26	FSM	ENSMUSG00000021709.15	ENSMUST00000091269.11	6224	26	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	14.0566852422611	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGAGTCTTGGTGTTGCCT	NA	False	NA	-5	True	NA	NA	NA	104056803	103955298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ENSMUST00000091288.13	chr2	+	2184	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	0.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCGGGGTTTGTTCT	NA	False	NA	7	True	ATTAAA	-17	NA	131751847	131780349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131751924_131754114_131754213_131778339
ENSMUST00000091289.5	chr3	-	1590	1	FSM	ENSMUSG00000069083.5	ENSMUST00000091289.5	1590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2785	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCAGCTAAGGCACAAAG	NA	False	NA	NA	False	NA	NA	NA	25266769	25265179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_25265200_25266800
ENSMUST00000091295.14	chr13	-	2140	8	FSM	ENSMUSG00000041431.17	ENSMUST00000091295.14	2140	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	1285.22781272903	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100922994	100915239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100921964_100922127_100922240_100922412_100922889
ENSMUST00000091299.8	chr13	-	1988	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTTTATGGACTATT	NA	False	NA	NA	False	CATAAA	-17	NA	100867447	100839138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUST00000091299.8-0	chr13	-	1309	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	0	679	0	0	multi-exon	FALSE	canonical	3	644	junction_3	44.8636133370117	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATTTATGATTAGAG	NA	False	NA	-29	True	AATAAA	-3	NA	100867447	100839817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUST00000091325.10	chr3	+	3391	19	FSM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	18.5947689444845	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTGATAATTGCACAC	NA	False	NA	NA	False	CATAAA	-26	NA	14598883	14631163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ENSMUST00000091328.4	chr7	+	1716	8	FSM	ENSMUSG00000063065.14	ENSMUST00000091328.4	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	19.3938765846231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCTGTCTGTGTAT	6212	False	NA	31	True	TATAAA	-24	NA	126359768	126364991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUST00000091348.11	chr2	-	4615	27	FSM	ENSMUSG00000036893.18	ENSMUST00000091348.11	4615	27	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_26	45.6963867643122	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGGTGCTGAATCTGGTG	9617	False	NA	NA	False	AATAAA	-16	NA	24809599	24681226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777079_24809565
ENSMUST00000091354.12	chr3	-	2193	6	FSM	ENSMUSG00000027506.16	ENSMUST00000091354.12	2193	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1287.01132862147	3064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9029106	8994657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9028906
ENSMUST00000091358.11	chr4	+	3527	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	145.930152384625	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812115	98823780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ENSMUST00000091374.9	chr1	-	1215	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	0	0	0	0	multi-exon	FALSE	canonical	3	3231	junction_1	432.6531520745	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	589	False	NA	0	True	AATAAA	-21	NA	59709993	59678592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ENSMUST00000091394.13	chr2	-	3023	11	FSM	ENSMUSG00000058835.15	ENSMUST00000091394.13	3023	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	121.126545397778	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGATATTGTTAAAGTAT	NA	False	NA	-2	True	AATAAA	-21	NA	22930149	22830375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ENSMUST00000091403.6	chr13	+	4038	8	FSM	ENSMUSG00000042082.8	ENSMUST00000091403.6	4038	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.27014946921703	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTTGGACATGGGG	NA	False	NA	NA	False	AATAAA	-21	NA	93908137	94079524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_93908601_93926546_93926734_93930535_93930727_93944003_93944212_93998594_93998839_94016995_94017067_94075734_94075858_94076973
ENSMUST00000091429.12	chr2	-	871	6	FSM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	43.3340512761039	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGCATTGTTTCTTGA	NA	False	NA	-2	True	AATAAA	-19	NA	14060831	14031641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_14031818_14040589_14040769_14049593_14049683_14049758_14049778_14049948_14050067_14060541
ENSMUST00000091459.12	chr13	+	3892	10	FSM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_7	8.92907582349531	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAACTGTGTCTTCTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	77856808	78314354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ENSMUST00000091466.4	chr13	+	5381	44	FSM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_18	33.3040145082969	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTTTTAAATTTTTTT	NA	False	NA	NA	False	AAGAAA	-39	NA	76246852	76336102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718
ENSMUST00000091505.11	chr2	+	3449	7	FSM	ENSMUSG00000050530.15	ENSMUST00000091505.11	3449	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	16.2241246981839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGAGTCAGTTCTTCA	917	False	NA	NA	False	AATAAA	-21	NA	3119449	3228289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3225854
ENSMUST00000091514.6	chr13	-	2644	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	7.15454401062709	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTATTGTTTGTCTTCAT	NA	False	NA	NA	False	AATAAA	-19	NA	69759561	69721567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
ENSMUST00000091556.12	chr2	+	4657	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2.87228132326901	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGCTTTTTTAGTATTT	NA	False	NA	16	True	AATAAA	-17	NA	138098484	138129342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
ENSMUST00000091565.5	chr11	+	2663	5	FSM	ENSMUSG00000075595.10	ENSMUST00000091565.5	2663	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	15.52417469626	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTGATTCTCAAAGAT	NA	False	NA	5	True	GATAAA	-15	NA	95639892	95655537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ENSMUST00000091579.6	chr13	-	1523	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7743681383791	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGATCTTCACTGTC	NA	False	NA	2	True	AATAAA	-22	NA	58422002	58381159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ENSMUST00000091609.11	chr13	-	2186	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAAAGACTGTATTTTA	7405	False	NA	19	True	AATAAA	-41	NA	54759157	54740213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ENSMUST00000091609.11-1	chr13	-	1642	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	0	544	0	-544	multi-exon	FALSE	canonical	3	406	junction_1	26.0708170182678	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGCCTTAGAGCATC	7405	False	NA	NA	False	NA	NA	NA	54759157	54740757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ENSMUST00000091614.7	chr4	+	3617	16	FSM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	162.820473733086	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	6045	False	NA	16	True	NA	NA	NA	40970905	41012608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
ENSMUST00000091641.13	chr13	+	1173	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	6	606	0	79	multi-exon	FALSE	canonical	1	67	junction_6	66.7082032062025	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACACTACACACTTAGA	NA	False	NA	15	True	AATAAA	-23	NA	38388926	38411035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ENSMUST00000091742.6	chr13	-	405	1	FSM	ENSMUSG00000069302.6	ENSMUST00000091742.6	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTTTCAATATCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	22219738	22219333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_22219300_22219700
ENSMUST00000091776.7	chr18	+	1866	1	FSM	ENSMUSG00000069324.7	ENSMUST00000091776.7	1866	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	87774409	87776275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_87774400_87776300
ENSMUST00000091789.11	chr18	+	4797	4	FSM	ENSMUSG00000041607.18	ENSMUST00000091789.11	4797	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.02768199119819	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGACTTTTTAAGTTGT	NA	False	NA	35	True	ATTAAA	-35	NA	82493270	82576828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_82493520_82518851_82518928_82540174_82540263_82572444
ENSMUST00000091790.5	chr18	-	4500	30	FSM	ENSMUSG00000024566.11	ENSMUST00000091790.5	5357	30	-77	934	0	0	multi-exon	FALSE	canonical	3	35	junction_1	27.0288523341592	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGACCTGAGCGCCT	9744	False	NA	-30	True	AATAAA	-24	NA	80977275	80778289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ENSMUST00000091798.10	chr18	+	1989	6	FSM	ENSMUSG00000034006.18	ENSMUST00000091798.10	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.1279864099595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGTGTAAGTAAGTCAG	NA	False	NA	14	True	AATAAA	-14	NA	80299520	80335939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
ENSMUST00000091813.12	chr18	-	3665	9	FSM	ENSMUSG00000059336.15	ENSMUST00000091813.12	3665	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.968245836551854	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTCATGTGTCTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	78166641	78143305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_78145784_78147244_78147295_78152806_78152942_78153123_78153272_78154568_78154762_78156880_78157010_78158935_78159126_78159587_78159745_78166456
ENSMUST00000091829.4	chr13	+	5720	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	76.8002431229876	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGATTTTTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	9144017	9224487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ENSMUST00000091848.7	chr13	-	1316	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	0	2147	0	-2140	multi-exon	FALSE	canonical	3	141	junction_4	13.8082101181387	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCTGCTTGACAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	4659173	4642895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ENSMUST00000091851.10	chr18	-	4594	6	FSM	ENSMUSG00000024558.13	ENSMUST00000091851.10	4594	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	8.45221864364617	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCAGGAATTGTCACGT	9818	False	NA	NA	False	AATAAA	-19	NA	74198000	74061556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74197910
ENSMUST00000091852.5	chr18	+	3738	2	FSM	ENSMUSG00000037253.9	ENSMUST00000091852.5	3738	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTCTCCTTGGTGTTTT	NA	False	NA	36	True	AATAAA	-23	NA	73706114	73725646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_73706848_73722641
ENSMUST00000091853.12	chr13	-	2680	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_9	26.5501241222916	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTCCTCCTAATTGT	NA	False	NA	NA	False	TTTAAA	-15	NA	3968220	3933332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ENSMUST00000091878.6	chr4	+	2798	4	FSM	ENSMUSG00000066009.9	ENSMUST00000091878.6	2798	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	56.5115524079418	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	146033914	146063191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146034017_146054375_146054480_146058453_146058581_146060726
ENSMUST00000091879.12	chr17	-	3265	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_3	17.9041894538681	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181432	22145940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
ENSMUST00000091884.6	chr18	-	5103	21	FSM	ENSMUSG00000024622.9	ENSMUST00000091884.6	5103	21	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_14	23.3398264775041	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5824	False	NA	-5	True	AATAAA	-29	NA	61310122	61264348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ENSMUST00000091903.5	chr14	-	2684	9	FSM	ENSMUSG00000021892.15	ENSMUST00000091903.5	2684	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	1.69096865730859	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAAAGTCCACTGTTGT	5908	False	NA	NA	False	AATAAA	-26	NA	31158022	31095741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31097159_31097560_31097822_31099347_31099568_31100234_31100278_31101345_31101477_31109675_31109841_31133497_31133627_31156039_31156103_31157767
ENSMUST00000091920.6	chr18	+	6266	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_8	26.3045239044415	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	NA	False	NA	19	True	ACTAAA	-2	NA	42408417	42474607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ENSMUST00000091920.6-0	chr18	+	3532	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	19	2715	0	-2604	multi-exon	FALSE	canonical	3	13	junction_8	26.3045239044415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCCTGGAATCTTTTAACT	NA	False	NA	15	True	ATTAAA	-9	NA	42408436	42471892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ENSMUST00000091924.10	chr3	-	1427	8	FSM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	13.8534604827436	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTAACAGAGTGATGT	NA	False	NA	0	True	NA	NA	NA	96501497	96485187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
ENSMUST00000091925.6	chr18	+	438	1	FSM	ENSMUSG00000096699.2	ENSMUST00000091925.6	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATGCTGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	42385462	42385900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_42385500_42385900
ENSMUST00000091967.13	chr18	+	2091	15	FSM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	7.8846919627173	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCGTGTCTTTCTT	NA	False	NA	16	True	AAAAAG	-23	NA	32510297	32568790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUST00000092033.4	chr10	-	1481	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGCAGTGCTGTGAAGTC	NA	False	NA	NA	False	TTTAAA	-14	NA	128012348	127968975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ENSMUST00000092033.4-0	chr10	-	1551	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	-191	121	-191	96	multi-exon	FALSE	canonical	3	274	junction_9	21.4048281157936	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTTCTTGCTTTGTATT	NA	False	NA	-1	True	AAAAAG	-22	NA	128012539	127969096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ENSMUST00000092041.11	chr18	-	2911	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	115.228382991837	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTCATTTGTTTCTT	NA	False	NA	-21	True	AATAAA	-15	NA	14815885	14758687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUST00000092073.11	chr7	+	3385	3	FSM	ENSMUSG00000055652.15	ENSMUST00000092073.11	3385	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	16	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTTTGGGTTCTGATT	NA	False	NA	16	True	AATAAA	-17	NA	75498085	75523878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_75498233_75515084_75516890_75522445
ENSMUST00000092074.12	chr10	+	3775	22	FSM	ENSMUSG00000002147.19	ENSMUST00000092074.12	3775	22	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	71.0521510108266	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAATCTACTGTACACA	2271	False	NA	-6	True	AATAAA	-22	NA	127478854	127496826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127479119_127482759_127482897_127483553_127483693_127483974_127484059_127486564_127486704_127486821_127486875_127487025_127487175_127487818_127487951_127488059_127488249_127488853_127488942_127489075_127489199_127490794_127490888_127491165_127491373_127492792_127492888_127492976_127493114_127493424_127493572_127494065_127494130_127494225_127494331_127494497_127494570_127495301_127495368_127495457_127495587_127495663
ENSMUST00000092096.14-1	chr18	-	4088	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	60	578	0	-578	multi-exon	FALSE	canonical	3	792	junction_3	60.9526592255553	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGAAAAGAAAGG	0	True	NA	NA	False	NA	NA	NA	10030081	9993643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ENSMUST00000092112.11	chr18	+	3094	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	131	False	NA	NA	False	AATAAA	-22	NA	7869492	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUST00000092112.11-0	chr18	+	4900	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	-297	-1509	0	0	multi-exon	FALSE	canonical	3	106	junction_6	129.708862029118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCAGTTATTTCAGAAT	11	True	NA	NA	False	AATAAA	-17	NA	7869195	7929028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUST00000092123.11	chr2	+	4697	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.11943751517944	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGATATATGTGTGTG	NA	False	NA	14	True	AGTAAA	-19	NA	49341497	49441960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ENSMUST00000092123.11-0	chr2	+	3603	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	333	761	333	-761	multi-exon	FALSE	canonical	2	3	junction_1	7.11943751517944	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTGCATATGTGTTTA	NA	False	NA	16	True	AATAAA	-21	NA	49341830	49441199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ENSMUST00000092154.10	chr3	-	3888	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAGATTTAGATTT	NA	False	NA	NA	False	AGTAAA	-14	NA	113423798	113398715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ENSMUST00000092154.10-0	chr3	-	3421	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	70	397	0	0	multi-exon	FALSE	canonical	3	32	junction_1	23.6233195061532	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	-1	True	AATAAA	-16	NA	113423728	113399112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ENSMUST00000092170.7	chr10	-	3012	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	17.9017379665278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198172	115176646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ENSMUST00000092219.14	chr10	-	1854	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGATTTATGACTTATT	NA	False	NA	-7	True	ATTAAA	-18	NA	91007430	90984977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUST00000092219.14-0	chr10	-	3409	8	FSM	ENSMUSG00000019961.18	ENSMUST00000092219.14	1854	8	-10	-1545	0	0	multi-exon	FALSE	canonical	3	63	junction_4	263.470092792177	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007440	90983432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUST00000092227.12	chr10	-	3566	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.88058797050879	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATGCTTAGTAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	89522130	89475813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ENSMUST00000092266.11	chr10	+	2959	10	FSM	ENSMUSG00000034674.19	ENSMUST00000092266.11	2959	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	369.308195427446	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTAGTATACAGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	82465661	82486158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUST00000092285.10	chr10	-	3362	4	FSM	ENSMUSG00000048240.15	ENSMUST00000092285.10	3362	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.68178700572909	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCGACTCTAAATTATTT	4444	False	NA	0	True	AATAAA	-19	NA	80850759	80784457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80787581_80788664_80788781_80833825_80833879_80850689
ENSMUST00000092295.10	chr10	-	1662	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	355.847657791302	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235384	80228372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ENSMUST00000092305.6	chr10	+	1994	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	263.9061002555	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	False	NA	12	True	AATAAA	-21	NA	80100907	80124242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ENSMUST00000092378.10	chr11	-	2995	5	FSM	ENSMUSG00000025575.15	ENSMUST00000092378.10	2995	5	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	68.7786304021823	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTTGTCTATGTTGG	9021	False	NA	-2	True	AATAAA	-16	NA	118309849	118297115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309755
ENSMUST00000092382.10	chr11	-	5609	21	FSM	ENSMUSG00000033909.18	ENSMUST00000092382.10	5609	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	36.2517585780331	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTTTCTGTGTCTGCCTT	NA	False	NA	-6	True	AATAAA	-23	NA	118181070	118150478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178593_118180782
ENSMUST00000092404.13	chr11	-	1899	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	0	0	0	0	multi-exon	FALSE	canonical	3	1775	junction_2	41.5	2031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCTGGTCTTTTGTTT	6003	False	NA	-5	True	ATTAAA	-31	NA	116743920	116740726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116741788_116742846_116743158_116743393
ENSMUST00000092425.11	chr11	+	737	6	FSM	ENSMUSG00000017404.13	ENSMUST00000092425.11	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	6391.5163271324	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917535	97921318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97917589_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUST00000092430.11	chr10	-	4167	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGTTTTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	71074110	71061293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ENSMUST00000092430.11-0	chr10	-	1469	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	223	2475	223	507	multi-exon	FALSE	canonical	3	350	junction_5	32.9212022191711	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTTTCTGAAATTAT	NA	False	NA	-13	True	AATAAA	-15	NA	71073887	71063768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ENSMUST00000092433.12	chr10	+	5072	20	FSM	ENSMUSG00000069601.15	ENSMUST00000092433.12	5072	20	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_16	15.2197204046814	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCTTGCCACTGTAGA	NA	False	NA	NA	False	NA	NA	NA	69761361	69860784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851397_69851484_69859661
ENSMUST00000092462.12	chr10	+	3651	21	FSM	ENSMUSG00000036875.16	ENSMUST00000092462.12	3651	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	84.7772964890955	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGGAGATCAGAGGACTA	NA	False	NA	NA	False	NA	NA	NA	62782853	62809546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805558_62805738_62807622_62807770_62809029
ENSMUST00000092473.5	chr10	-	2712	9	FSM	ENSMUSG00000020078.17	ENSMUST00000092473.5	2712	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	336.090552344156	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTCATTACAGCAT	5405	False	NA	-5	True	AATAAA	-15	NA	62322377	62291013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322156
ENSMUST00000092486.11	chr10	-	5188	22	FSM	ENSMUSG00000059901.13	ENSMUST00000092486.11	5188	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_20	4.41446807041021	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCCCTTGGTGTTTTGT	4942	False	NA	-4	True	TTTAAA	-19	NA	61109217	61032890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704_61081896_61085382_61085540_61106635_61107037_61108934
ENSMUST00000092498.12	chr10	-	4070	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_14	85.0811437417726	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983453	60934420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ENSMUST00000092500.11-1	chr11	+	1621	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	36	1159	0	0	multi-exon	FALSE	canonical	3	91	junction_1	26.8953411393126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	False	NA	19	True	AATAAA	-15	NA	109316807	109327815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUST00000092517.9	chr11	-	3125	19	FSM	ENSMUSG00000018363.17	ENSMUST00000092517.9	3125	19	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_17	7.74038631121946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTAATGCAGCCATTTA	NA	False	NA	NA	False	NA	NA	NA	106811296	106712850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
ENSMUST00000092517.9-0	chr11	-	5329	19	FSM	ENSMUSG00002076856.1_ENSMUSG00000018363.17	ENSMUST00000092517.9	3125	19	-245	-1959	0	0	multi-exon	TRUE	canonical	3	28	junction_17	7.74038631121946	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACTGAGTTTTTACT	NA	False	NA	-6	True	AATAAA	-39	NA	106811541	106710891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106766726_106766766_106811006
ENSMUST00000092523.3	chr7	-	612	1	FSM	ENSMUSG00000074547.5	ENSMUST00000092523.3	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGCGTAGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	13067182	13066570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_13066600_13067200
ENSMUST00000092528.6	chr13	+	1815	4	FSM	ENSMUSG00000095909.3	ENSMUST00000092528.6	1815	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	105.455625212166	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGGATAATTATCAATG	NA	False	NA	NA	False	NA	NA	NA	66267360	66270650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_66267364_66267450_66267578_66267777_66267839_66269026
ENSMUST00000092537.10	chr11	+	2743	20	FSM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	62.1637993541137	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAACATACTGTG	NA	False	NA	-7	True	GATAAA	-11	NA	105072618	105167285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ENSMUST00000092566.8	chr10	-	5397	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.87814388593306	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTGTGATTGTGTTTCT	7143	False	NA	NA	False	AATAAA	-22	NA	40018250	39909527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
ENSMUST00000092567.11	chr11	-	1890	3	FSM	ENSMUSG00000034520.15	ENSMUST00000092567.11	1890	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	376	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	NA	False	NA	-8	True	ATTAAA	-22	NA	102710526	102690404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102692022_102693666_102693743_102710329
ENSMUST00000092569.13	chr11	-	2366	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588608	102575511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ENSMUST00000092569.13-0	chr11	-	1673	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	48	645	0	-643	multi-exon	FALSE	canonical	0	0	junction_2	239.593405585379	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTGTTAGGCTGAA	NA	False	NA	1	True	NA	NA	NA	102588560	102576156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ENSMUST00000092576.11	chr2	+	3887	15	FSM	ENSMUSG00000027646.16	ENSMUST00000092576.11	3887	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	51.505696138329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157266212	157313758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ENSMUST00000092584.6	chr10	-	4048	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATCGTGTTATTAAGT	NA	False	NA	-3	True	AATAAA	-16	NA	37014916	37009370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_37012932_37014429
ENSMUST00000092584.6-0	chr10	-	2603	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	0	1445	0	-1445	multi-exon	FALSE	canonical	3	339	junction_1	0	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATTTGTTGTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	37014916	37010815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_37012932_37014429
ENSMUST00000092614.9	chr6	+	866	9	FSM	ENSMUSG00000069678.11	ENSMUST00000092614.9	866	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	14.5408906192159	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	150	False	NA	16	True	AATAAA	-8	NA	83055370	83057828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUST00000092618.9	chr6	+	1769	12	FSM	ENSMUSG00000068328.11	ENSMUST00000092618.10	1769	12	0	0	0	0	multi-exon	TRUE	canonical	3	960	junction_10	78.8006166859286	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGATCCCAGCTCAAT	5213	False	NA	NA	False	ACTAAA	-13	NA	83031501	83034789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUST00000092620.6	chr10	-	635	1	FSM	ENSMUSG00000069682.7	ENSMUST00000092620.6	635	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAATCAATAGAC	NA	False	NA	-8	True	AATAAA	-21	NA	29575376	29574741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29574700_29575400
ENSMUST00000092648.13	chr6	-	2115	18	FSM	ENSMUSG00000029687.17	ENSMUST00000092648.13	2115	18	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_6	137.340256373582	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACTACCTCTTCCCCT	8678	False	NA	NA	False	NA	NA	NA	47554594	47507474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477
ENSMUST00000092663.4	chr11	+	3813	20	FSM	ENSMUSG00000019302.17	ENSMUST00000092663.4	3813	20	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_17	24.3376525088162	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100902646	100954545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ENSMUST00000092671.12	chr11	-	2927	24	FSM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	102.661666503989	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAAGAA	NA	False	NA	NA	False	TTTAAA	-3	NA	100830206	100779061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUST00000092673.11	chr10	+	2576	12	FSM	ENSMUSG00000019970.16	ENSMUST00000092673.11	2576	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	274.769775907151	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCATAAATTGTGTCA	NA	False	NA	6	True	AATAAA	-12	NA	21869788	21875790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21870081_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000092674.14	chr10	+	2625	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	452.231688407613	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGCATGTTATTTAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	21171936	21187108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
ENSMUST00000092678.10	chr10	+	5307	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2790	False	NA	16	True	AATAAA	-17	NA	20188214	20218247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUST00000092678.10-0	chr10	+	3069	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	3	2235	0	0	multi-exon	FALSE	canonical	3	294	junction_10	195.138687701892	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTGTAACTATCAACTT	2793	False	NA	12	True	AATAAA	-20	NA	20188217	20216012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUST00000092688.12	chr11	-	1399	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	92.107868149252	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACGCGTCTTTAATCCC	NA	False	NA	-2	True	ATTAAA	-19	NA	100331915	100320178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ENSMUST00000092689.9	chr11	-	1344	8	FSM	ENSMUSG00000017176.18	ENSMUST00000092689.9	1344	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	183.081112836772	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGCACGCGTCTTTAAT	NA	False	NA	-5	True	ATTAAA	-16	NA	100331846	100320181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331753
ENSMUST00000092706.13	chr11	+	4614	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGATGCCTCTGCCAT	17	False	NA	NA	False	AATAAA	-18	NA	98798626	98814762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ENSMUST00000092706.13-0	chr11	+	2523	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	48	2043	0	0	multi-exon	FALSE	canonical	3	550	junction_4	61.3919799860826	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGGGCTGCATTTG	0	True	NA	8	True	AATATA	-17	NA	98798674	98812719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ENSMUST00000092720.4	chr5	-	3341	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	21.5148527508066	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGGTATC	6131	False	NA	-3	True	NA	NA	NA	109838907	109822410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
ENSMUST00000092735.12	chr11	-	2627	18	FSM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	53.6447367918524	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCTGTGTTTTTTAT	NA	False	NA	NA	False	AATAAA	-42	NA	98084086	98042979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98043790_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUST00000092736.11	chr11	-	1880	13	FSM	ENSMUSG00000020882.18	ENSMUST00000092736.11	1880	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	26.3832596335041	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913460	97895750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUST00000092766.12	chr11	-	3414	15	FSM	ENSMUSG00000038909.17	ENSMUST00000092766.12	3414	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	245.342544793426	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95200428	95165084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200362
ENSMUST00000092821.10	chr11	+	2769	24	FSM	ENSMUSG00000059439.16	ENSMUST00000092821.10	2769	24	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_23	18.8377812860411	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCAGCCACCTGCTTCTG	3523	False	NA	NA	False	NA	NA	NA	85244037	85716176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
ENSMUST00000092849.12	chr11	+	4560	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	18.4785568622637	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTGTCTGGCTCTATC	NA	False	NA	NA	False	NA	NA	NA	82671933	82693688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUST00000092857.13	chr11	+	3687	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACACTTTTCAAAGACAAC	NA	False	NA	NA	False	AATAAA	-13	NA	80099909	80158312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ENSMUST00000092857.13-0	chr11	+	3013	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	0	674	0	0	multi-exon	FALSE	canonical	3	336	junction_18	65.0695971182841	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGGTTTTTTGTCTTC	NA	False	NA	9	True	AATAAA	-20	NA	80099909	80157638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ENSMUST00000092907.12	chr11	-	5077	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	0	0	0	0	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTCTGACTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	75239150	75188991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUST00000092907.12-0	chr11	-	2893	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	0	2184	0	0	multi-exon	FALSE	canonical	3	1486	junction_1	165.245638652734	2710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239150	75191175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUST00000092915.12	chr11	+	5379	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.5319897601097	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540340	74561673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUST00000092937.13	chr11	+	3424	16	FSM	ENSMUSG00000020785.18	ENSMUST00000092937.13	3424	16	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	5.11815939137846	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTATGTCTTCTGCA	NA	False	NA	NA	False	AATAAA	-29	NA	72909868	72932899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ENSMUST00000092955.11	chr19	+	830	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	17.6703140888893	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGAGGTGGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	8966658	9054078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
ENSMUST00000092966.5	chr17	+	2589	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	0	0	0	0	multi-exon	TRUE	canonical	3	5304	junction_1	1714.27572169707	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	6869069	6877078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ENSMUST00000092966.5-0	chr17	+	685	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	121	1783	0	347	multi-exon	FALSE	canonical	3	5304	junction_1	1714.27572169707	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTTTTTGTGTTCCTTG	NA	False	NA	NA	False	AATAAA	-12	NA	6869190	6875295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ENSMUST00000092973.6	chr11	-	3861	19	FSM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_15	16.162847964421	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTAAGAATGTTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	69214601	69190312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ENSMUST00000092990.4	chr5	+	3035	12	FSM	ENSMUSG00000029314.15	ENSMUST00000092990.4	3035	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.94172425248705	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCATTATTCTTCCTC	NA	False	NA	8	True	AATAAA	-19	NA	100994229	101046968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ENSMUST00000092996.5	chr11	+	2412	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACATGAAGCCTAATGAA	NA	False	NA	14	True	AATAAA	-32	NA	66943495	66956398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ENSMUST00000092996.5-0	chr11	+	1742	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	0	670	0	-429	multi-exon	FALSE	canonical	3	241	junction_2	26.3469163281019	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGACAAGCATGGCTTTG	NA	False	NA	9	True	AATAAA	-21	NA	66943495	66955728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ENSMUST00000093019.6	chr11	+	4778	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTTGTCATTGAACT	NA	False	NA	NA	False	AATAAA	-28	NA	61575244	61600777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
ENSMUST00000093019.6-0	chr11	+	3033	5	FSM	ENSMUSG00000042377.9	ENSMUST00000093019.6	4778	5	0	1745	0	-1745	multi-exon	FALSE	canonical	3	16	junction_3	2.38484800354236	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCCCACAGTGTCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	61575244	61599032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
ENSMUST00000093039.6	chr8	-	2912	5	FSM	ENSMUSG00000038697.16	ENSMUST00000093039.6	2912	5	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_4	121.207208944023	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	4094	False	NA	36	True	ATTAAA	-15	NA	124747747	124723056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
ENSMUST00000093040.13	chr7	-	1192	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	28.7402157263998	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878321	26867848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ENSMUST00000093043.7	chr8	+	1681	11	FSM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	6.18789140176199	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTCTGTCGTTGTGAGG	NA	False	NA	7	True	AATGAA	-21	NA	124245572	124263389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
ENSMUST00000093061.7	chr11	+	2251	6	FSM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	0	0	0	0	multi-exon	FALSE	canonical	2	58	junction_2	16.6781293915115	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCTCTGCTTATCCTGT	1689	False	NA	14	True	AATAAA	-14	NA	58868941	58882283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654_58879756_58881012
ENSMUST00000093073.12	chr8	+	3705	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	41.8252254144417	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	939	False	NA	15	True	AATAAA	-16	NA	123103381	123144099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ENSMUST00000093078.13	chr8	+	2289	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	55.5245191084283	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677230	122752916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUST00000093099.13	chr8	-	3236	15	FSM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_9	12.1866856085832	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGTGTGTAAAGCCCAC	1064	False	NA	-2	True	NA	NA	NA	120331961	120324713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ENSMUST00000093106.12	chr11	+	2583	21	FSM	ENSMUSG00000020333.18	ENSMUST00000093106.12	5804	21	0	3221	0	0	multi-exon	FALSE	canonical	3	16	junction_10	11.8346947573649	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATTGTACTTAATT	NA	False	NA	5	True	ATTAAA	-19	NA	54194623	54252361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ENSMUST00000093107.12	chr11	+	2263	16	FSM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	14.6945190084225	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAATAGCCTTATTTT	NA	False	NA	15	True	AATAAA	-17	NA	53991749	54022478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
ENSMUST00000093115.4	chr11	+	965	3	FSM	ENSMUSG00000017776.16	ENSMUST00000093115.4	965	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	223.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATTTAAAAAAA	2150	False	NA	NA	False	NA	NA	NA	75570136	75591615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75570491_75583022_75583389_75591370
ENSMUST00000093120.13	chr8	-	2131	15	FSM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_14	463.92143951408	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737898	112720074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
ENSMUST00000093132.13	chr11	+	1949	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	48.5840480221875	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51153940	51172591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUST00000093138.13	chr11	+	4407	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_18	14.0538251020852	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022222	50062857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ENSMUST00000093140.5	chr11	+	962	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	1006	junction_1	419	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAAACCTTCATCGTA	4011	False	NA	129	True	AATAAA	-17	NA	120489357	120496602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120489697_120490067_120490195_120496106
ENSMUST00000093140.5-0	chr11	+	723	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	139	100	139	-100	multi-exon	FALSE	canonical	3	1006	junction_1	419	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGCTGGAGGCCTCTGC	4150	False	NA	29	True	AGTAAA	-18	NA	120489496	120496502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120489697_120490067_120490195_120496106
ENSMUST00000093146.4	chr11	-	1821	2	FSM	ENSMUSG00000069890.4	ENSMUST00000093146.4	1821	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTGCAGTTTCTGA	NA	False	NA	NA	False	AATAAA	-14	NA	49479289	49477467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_49478923_49478923
ENSMUST00000093157.13	chr8	+	6899	24	FSM	ENSMUSG00000031731.17	ENSMUST00000093157.13	6899	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	59.7914143712471	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAACTTTGCTGCCTTGC	NA	False	NA	16	True	AATAAA	-18	NA	110505185	110590836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110557244_110557254_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUST00000093162.4	chr8	-	7327	4	FSM	ENSMUSG00000069895.5	ENSMUST00000093162.4	7526	4	0	199	0	-195	multi-exon	FALSE	canonical	3	22	junction_3	4.32049379893857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGTACTTTTGTGAGA	NA	False	NA	0	True	AATAAA	-15	NA	110464371	110453281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_110460375_110461936_110461996_110462091_110462158_110464262
ENSMUST00000093166.11	chr11	-	6298	31	FSM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_25	27.300895386212	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCATCTTCGTCCTGACT	NA	False	NA	0	True	ATTAAA	-22	NA	46203121	46084681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ENSMUST00000093166.11-0	chr11	-	4082	31	FSM	ENSMUSG00000020340.17	ENSMUST00000093166.11	6298	31	0	2216	0	0	multi-exon	FALSE	canonical	3	40	junction_25	27.300895386212	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGCAGTGTGTGCTTT	NA	False	NA	NA	False	AATGAA	-18	NA	46203121	46086897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ENSMUST00000093169.3	chr11	-	958	1	FSM	ENSMUSG00000069899.4	ENSMUST00000093169.3	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGACAGAGAGAGAGAGAA	1797	False	NA	NA	False	AATAAA	-30	NA	45943138	45942180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_45942200_45943100
ENSMUST00000093191.3	chr11	-	2505	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	17.9669117367279	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGTATTTTTTAAT	NA	False	NA	-7	True	AATAAA	-15	NA	34724468	34700016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ENSMUST00000093195.7	chr8	+	1265	3	FSM	ENSMUSG00000005699.17	ENSMUST00000093195.7	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGTGGTCCTTCTGTGT	NA	False	NA	10	True	ATTAAA	-16	NA	106428278	106430124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106428436_106428805_106429029_106429239
ENSMUST00000093205.13	chr11	+	3938	13	FSM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	161.315167710086	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGTCACATTTCT	NA	False	NA	4	True	AATAAA	-15	NA	32592865	32696789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32592936_32630200_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUST00000093234.5	chr8	-	639	5	FSM	ENSMUSG00000031879.15	ENSMUST00000093234.5	639	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	369.363641957353	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCAGTATGCCTTAGCG	NA	False	NA	-10	True	AATAAA	-18	NA	105368333	105366479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105366719_105367151_105367198_105367599_105367721_105367942_105368023_105368180
ENSMUST00000093239.11	chr11	+	2741	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	30.3862706462472	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	29476456	29495248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUST00000093267.11	chr11	-	3646	19	FSM	ENSMUSG00000042208.16	ENSMUST00000093267.11	3646	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	27.8991238412806	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTATTTTATATCTG	NA	False	NA	-7	True	AGTAAA	-21	NA	23579027	23523902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23574935_23575123_23578872
ENSMUST00000093271.8	chr8	+	3574	14	FSM	ENSMUSG00000031785.17	ENSMUST00000093271.8	3574	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.2826991162311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAGTTGCCCGTCTCAG	7943	False	NA	28	True	AATAAA	-41	NA	95710998	95740827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95711286_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ENSMUST00000093290.12	chr11	+	3514	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCGAATTTGTCTGTG	NA	False	NA	27	True	AGTAAA	-15	NA	21041290	21100323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ENSMUST00000093290.12-0	chr11	+	2593	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	0	921	0	0	multi-exon	FALSE	canonical	3	114	junction_5	13.7931142241337	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	TATAAA	-27	NA	21041290	21099402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ENSMUST00000093292.11	chr11	+	1830	2	FSM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	-81	3898	0	58	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATATATCTATATTATT	NA	False	NA	22	True	NA	NA	NA	20493252	20599123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_20493761_20597801
ENSMUST00000093298.12	chr11	+	4301	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	0	-1449	0	0	multi-exon	TRUE	canonical	3	51	junction_2	8.95767827062348	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGCTTTGGGGTATTT	NA	False	NA	3	True	TATAAA	-15	NA	19874441	19974026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ENSMUST00000093321.12	chr11	-	5061	17	FSM	ENSMUSG00000020176.18	ENSMUST00000093321.12	5061	17	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_14	7.38135319572231	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11987401	11880507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11904743_11904909_11917531_11917686_11920422_11920643_11937595_11937675_11987191
ENSMUST00000093336.8	chr16	-	1266	8	FSM	ENSMUSG00000049916.13	ENSMUST00000093336.8	1266	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	117.062516003464	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTGTATGTCCTCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	16942970	16931261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16941375_16941519_16942853
ENSMUST00000093346.6	chr11	-	519	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGTCTCAGTATTTC	NA	False	NA	-3	True	GATAAA	-16	NA	6394352	6378137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
ENSMUST00000093346.6-0	chr11	-	1519	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	-91	-909	0	0	multi-exon	FALSE	canonical	3	328	junction_2	1363.86957669061	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-24	NA	6394443	6377228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
ENSMUST00000093350.10	chr11	+	4075	24	FSM	ENSMUSG00000020456.18	ENSMUST00000093350.10	4075	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	222.742486968574	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTTTGCATTGCATCGG	NA	False	NA	-36	True	AAAAAG	-19	NA	6241667	6306592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266764_6266856_6274877_6274923_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUST00000093355.12	chr11	-	1973	21	FSM	ENSMUSG00000057897.15	ENSMUST00000093355.12	1973	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	41.4625131896271	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGATGACAACGACAACCA	3040	False	NA	-144	True	TTTAAA	-6	NA	6015582	5921668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUST00000093355.12-0	chr11	-	4074	21	FSM	ENSMUSG00000057897.15	ENSMUST00000093355.12	1973	21	-76	-2025	0	0	multi-exon	FALSE	canonical	3	14	junction_5	41.4625131896271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAAATTGCTTCCAGTA	2964	False	NA	NA	False	NA	NA	NA	6015658	5919643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5927811_5927941_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUST00000093357.12	chr8	-	1238	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	13.3410784796432	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTCTTCATTCTT	NA	False	NA	-2	True	AATAAA	-35	NA	85807375	85801663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
ENSMUST00000093360.12	chr8	+	4863	25	FSM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_1	89.272513111384	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	False	NA	14	True	AGTAAA	-16	NA	85763543	85784209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUST00000093369.5	chr11	-	3994	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTGTTTTTACTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	4898064	4888753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
ENSMUST00000093369.5-0	chr11	-	3060	4	FSM	ENSMUSG00000020396.9	ENSMUST00000093369.5	3994	4	934	0	934	0	multi-exon	FALSE	canonical	3	23	junction_2	3.09120616516523	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTGTTTTTACTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	4897130	4888753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4891416_4893850_4893976_4895110_4895311_4897057
ENSMUST00000093374.11	chr11	-	1795	16	FSM	ENSMUSG00000009073.17	ENSMUST00000093374.11	1795	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	91.6800232693397	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCCCAGGCAATACAGGA	NA	False	NA	NA	False	ATTAAA	-23	NA	4770396	4729813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4730035_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367
ENSMUST00000093381.11	chr11	-	5015	12	FSM	ENSMUSG00000051427.15	ENSMUST00000093381.11	5015	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	2.2672661660618	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTTTGTGTTTTTGT	8493	False	NA	-4	True	ATTAAA	-16	NA	4110291	4091122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4101671_4101931_4102908_4103057_4110158
ENSMUST00000093389.9	chr11	+	5085	27	FSM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	0	0	0	0	multi-exon	FALSE	canonical	2	110	junction_1	78.9355590669193	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGCCCTGCATTTTTA	NA	False	NA	24	True	CATAAA	-17	NA	3599493	3640370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ENSMUST00000093393.5	chr8	+	5334	21	FSM	ENSMUSG00000031709.16	ENSMUST00000093393.5	5334	21	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_8	3.27528624703246	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGATGTCCTTGTACTTG	NA	False	NA	3	True	AATAAA	-15	NA	83892488	83999563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_83892834_83937049_83937161_83948066_83948186_83960108_83960338_83960740_83961003_83963140_83963349_83966459_83966667_83968166_83968338_83969150_83969302_83976030_83976246_83980086_83980205_83981255_83981542_83982423_83982554_83985623_83985723_83985932_83986002_83987547_83987789_83991475_83991542_83992709_83992797_83995611_83995687_83995772_83995877_83997522
ENSMUST00000093402.12	chr11	+	3173	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	189.564467925822	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6470	False	NA	14	True	ATTAAA	-16	NA	3240456	3259083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
ENSMUST00000093444.13	chr8	-	3073	26	FSM	ENSMUSG00000070000.14	ENSMUST00000093444.13	3073	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	45.271377270854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGATTTTTGCCGCTG	NA	False	NA	1	True	NA	NA	NA	72173951	72161030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166238_72166620_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895
ENSMUST00000093450.6	chr8	-	3653	17	FSM	ENSMUSG00000034863.10	ENSMUST00000093450.6	3653	17	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	6.28987281270456	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTCGAGGTCAGAGCAGT	NA	False	NA	-21	True	AATAAA	-16	NA	71938607	71928662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71929566_71931364_71931476_71931570_71931703_71931794_71931987_71933079_71933887_71934595_71934671_71934776_71934833_71934927_71935055_71935150_71935304_71935623_71935786_71935883_71936012_71936091_71936209_71936911_71937009_71937077_71937217_71937392_71937526_71937643_71937755_71938397
ENSMUST00000093454.8	chr8	+	3072	12	FSM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	19.7818683154445	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	False	NA	8	True	AATAAA	-16	NA	70992337	71045508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ENSMUST00000093456.12	chr8	-	1216	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_4	146.224784150978	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATAGCAACAGTGGCT	NA	False	NA	-13	True	AATAAA	-20	NA	70975830	70966045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUST00000093458.11	chr8	+	3874	11	FSM	ENSMUSG00000036054.16	ENSMUST00000093458.11	3874	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	33.7467035427166	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1099	False	NA	26	True	AATAAA	-17	NA	70686882	70715755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70715520
ENSMUST00000093490.9	chr8	-	5518	12	FSM	ENSMUSG00000004319.16	ENSMUST00000093490.9	5518	12	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_11	42.8184713366008	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436334	61363422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
ENSMUST00000093534.11	chr8	-	4148	12	FSM	ENSMUSG00000045636.17	ENSMUST00000093534.11	4148	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	37.1494635846616	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATCTTGAGTCCTTGC	NA	False	NA	-6	True	TATAAA	-41	NA	41507831	41443954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41507558
ENSMUST00000093552.12	chr7	-	1577	10	FSM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	0	0	0	0	multi-exon	TRUE	canonical	3	2342	junction_9	200.868177398407	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGAGGCCTCGGTTTTC	9881	False	NA	-13	True	NA	NA	NA	19449363	19435237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ENSMUST00000093598.3	chrX	-	75	1	FSM	ENSMUSG00000070106.3	ENSMUST00000093598.3	75	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACCTATGTGGACAGC	9971	False	NA	NA	False	NA	NA	NA	51830644	51830569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_51830600_51830600
ENSMUST00000093658.3	chr19	-	148	1	FSM	ENSMUSG00000070167.3	ENSMUST00000093658.3	148	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGTGCAGAAATGTAGCT	NA	False	NA	-9	True	NA	NA	NA	8866049	8865901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8865900_8866000
ENSMUST00000093769.8	chr6	-	4598	23	FSM	ENSMUSG00000045095.17	ENSMUST00000093769.8	4598	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	12.2754205798915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	2665	False	NA	-1	True	ATTAAA	-19	NA	93890671	93655016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685199_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93890304
ENSMUST00000093772.4	chr9	+	3665	6	FSM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	0	2688	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.5281099844341	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGGGCAGGCCCAAG	2067	False	NA	NA	False	AATAAA	-20	NA	121589098	121598120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
ENSMUST00000093785.6	chr9	+	2053	2	FSM	ENSMUSG00000079334.9	ENSMUST00000093785.6	2053	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACAGTTTATTGGTT	NA	False	NA	12	True	AATAAA	-18	NA	107457315	107461249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107458135_107460015
ENSMUST00000093795.10	chr9	+	2606	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_10	72.0150887688172	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125494	99182457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ENSMUST00000093800.9	chr9	-	3704	16	FSM	ENSMUSG00000049493.14	ENSMUST00000093800.9	3704	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	11.5231168623	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTATTTCATTTAA	NA	False	NA	2	True	AATAAA	-19	NA	95727339	95634694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_95636491_95636713_95636839_95643365_95643490_95643986_95644121_95647743_95647859_95651146_95651226_95655570_95655767_95657360_95657457_95658518_95658662_95658741_95658908_95664422_95664505_95666152_95666286_95667542_95667673_95668985_95669150_95677814_95677920_95727223
ENSMUST00000093801.10	chr9	+	1488	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	513	301	-79	0	multi-exon	FALSE	canonical	1	104	junction_4	78.1135991681346	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGATGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	92132315	92154030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ENSMUST00000093802.6	chr9	-	7685	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGAGTTTTGTGTTTAT	NA	False	NA	NA	False	AATACA	-18	NA	87137589	87071629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ENSMUST00000093802.6-0	chr9	-	4482	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	248	2955	0	-2955	multi-exon	FALSE	canonical	3	45	junction_14	9.30228705097291	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGGTTCCATGACGTC	NA	False	NA	-8	True	ATTAAA	-12	NA	87137341	87074584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ENSMUST00000093813.12	chr14	+	5621	24	FSM	ENSMUSG00000004562.17	ENSMUST00000093813.12	5621	24	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_21	8.41571129479579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGGCAGAGCGGCTCC	NA	False	NA	NA	False	AATAAA	-23	NA	52222294	52243708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242797
ENSMUST00000093819.2	chr9	-	2866	2	FSM	ENSMUSG00000079469.11	ENSMUST00000093819.2	2866	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAGCTGGCCGCTAGC	NA	False	NA	NA	False	NA	NA	NA	72922939	72915762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_72916063_72920373
ENSMUST00000093833.6	chr9	+	3001	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	8.73053390247253	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAGCTGTACTGTGCTG	NA	False	NA	12	True	AATAAA	-12	NA	57444810	57450465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
ENSMUST00000093883.4	chr2	-	1363	5	FSM	ENSMUSG00000027122.16	ENSMUST00000093883.4	1363	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	101.504925988841	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAAACTTTAATTTT	NA	False	NA	NA	False	AATAAA	-13	NA	106800736	106794773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106800655
ENSMUST00000093901.12	chr11	-	2770	13	FSM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_11	8.42944574426786	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989557	119981356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ENSMUST00000093906.5	chr11	+	3334	3	FSM	ENSMUSG00000017716.16	ENSMUST00000093906.5	3334	3	0	0	0	0	multi-exon	FALSE	canonical	3	1683	junction_1	252.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTCTTGGAGAAATGG	NA	False	NA	40	True	AATAAA	-29	NA	117740144	117746569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117740288_117740579_117740690_117743488
ENSMUST00000093907.11	chr11	+	3616	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	260.952736292441	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCTTTGGCAAGACCT	3698	False	NA	103	True	AATAAA	-28	NA	117090486	117253151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000093912.11	chr11	+	5329	32	FSM	ENSMUSG00000020747.19	ENSMUST00000093912.11	5329	32	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	18.7440729445739	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTCTCTCTGCTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	115656258	115690192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ENSMUST00000093923.9	chr11	-	5425	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	36.161503300992	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2203	False	NA	-32	True	AATAAA	-16	NA	104441309	104393570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUST00000093940.4	chr11	+	2409	3	FSM	ENSMUSG00000049807.17	ENSMUST00000093940.4	2409	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCAGTGTCTCGCTTGT	5489	False	NA	10	True	AATAAA	-17	NA	97381969	97393224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97382057_97383876_97383909_97390934
ENSMUST00000093943.10	chr11	+	1251	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	266.87570140423	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGTCTTTTGGTGGGG	NA	False	NA	NA	False	ATTAAA	-15	NA	96679984	96699466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ENSMUST00000093955.12	chr11	+	706	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_3	25.7972866790289	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAAGGGTACTGAGGCCT	NA	False	NA	2	True	AATAAA	-19	NA	87628377	87634443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
ENSMUST00000093962.5	chr7	-	3740	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_3	35.5316760088797	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493606	144483667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ENSMUST00000093969.11	chr11	+	4091	25	FSM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	19.4264996561112	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTACAGTTGTAAGT	NA	False	NA	120	True	NA	NA	NA	84770973	84802052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ENSMUST00000093975.12	chr11	-	3575	8	FSM	ENSMUSG00000020696.19	ENSMUST00000093975.12	3575	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.0595227528256	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	3209	False	NA	NA	False	AATAAA	-11	NA	82761570	82694647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82724906_82725106_82761480
ENSMUST00000093993.5	chr7	+	2243	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	0	814	0	0	multi-exon	FALSE	canonical	3	49	junction_2	5.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAACAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	138828397	138847077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_138828560_138834685_138836077_138846387
ENSMUST00000094012.11	chr11	-	5236	22	FSM	ENSMUSG00000017631.20	ENSMUST00000094012.11	5236	22	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_9	20.258980819747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	NA	False	NA	-1	True	AATAAA	-36	NA	76400245	76307559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713
ENSMUST00000094014.10	chr11	+	2130	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.18465843842649	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTATGTGCCCTGGCG	3406	False	NA	NA	False	ATTAAA	-17	NA	76092840	76100242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ENSMUST00000094051.6	chr14	+	1647	1	FSM	ENSMUSG00000049235.9	ENSMUST00000094051.6	1647	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAGAAAGTGGTT	NA	False	NA	NA	False	NA	NA	NA	43951188	43952835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_43951200_43952800
ENSMUST00000094053.7	chr7	+	8183	24	FSM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	29.037424518788	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTGGTTTTGCTTTT	NA	False	NA	21	True	AATAAA	-20	NA	122723403	122794519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ENSMUST00000094065.5	chr11	+	492	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_1	145.470119115767	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTCTTTATTCATC	NA	False	NA	NA	False	ATTAAA	-21	NA	69729349	69730444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
ENSMUST00000094097.12	chr7	-	3840	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	0	0	0	0	multi-exon	TRUE	canonical	3	346	junction_6	24.644133852366	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATAATTTTCCCACCAA	NA	False	NA	NA	False	AATAAA	-25	NA	109585658	109571393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ENSMUST00000094097.12-1	chr7	-	1978	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	202	1660	0	-362	multi-exon	FALSE	canonical	3	346	junction_6	24.644133852366	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCATGCATGATACATC	NA	False	NA	-15	True	ATTAAA	-17	NA	109585456	109573053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ENSMUST00000094103.4	chr11	-	4911	2	FSM	ENSMUSG00000070407.6	ENSMUST00000094103.4	4911	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGAGTATGTTCCTATT	NA	False	NA	-2	True	AATAAA	-15	NA	63813116	63776617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_63780572_63812159
ENSMUST00000094116.5	chr5	+	1796	5	FSM	ENSMUSG00000070420.5	ENSMUST00000094116.5	1796	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	6.87386354243376	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGGGAAGCTGGCAGAA	5625	False	NA	NA	False	NA	NA	NA	145220161	145228088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145220591_145223117_145223320_145224117_145224210_145225103_145225228_145227139
ENSMUST00000094130.4	chr7	+	2298	11	FSM	ENSMUSG00000099481.7	ENSMUST00000094130.4	2298	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	17.4482090771517	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAAGAGAATGCTA	NA	False	NA	NA	False	GGGGCT	-7	NA	101714964	101732288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ENSMUST00000094130.4-0	chr7	+	3229	11	FSM	ENSMUSG00000100254.2_ENSMUSG00000099481.7	ENSMUST00000094130.4	2298	11	-247	-684	0	0	multi-exon	FALSE	canonical	3	50	junction_1	17.4482090771517	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCCGATCTGTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	101714717	101732972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101715012_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ENSMUST00000094151.6	chr11	-	1949	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	0	0	0	0	multi-exon	TRUE	canonical	3	1063	junction_2	80.5495016882303	1612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTTCCATACCTCCT	NA	False	NA	-16	True	AATAAA	-17	NA	58829742	58823113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
ENSMUST00000094154.6	chr7	-	2215	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	0	0	0	0	multi-exon	FALSE	canonical	3	1409	junction_4	114.233313879971	2273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCTTTCTAAGACAAAG	NA	False	NA	90	True	ATTAAA	-17	NA	99002446	98994595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
ENSMUST00000094215.10	chr7	+	4492	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	0	0	0	0	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTATTCTGTGCGTGT	NA	False	NA	NA	False	TTTAAA	-41	NA	83541207	83550740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_83541684_83544737_83544971_83546957
ENSMUST00000094215.10-0	chr7	+	1874	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	262	2356	-68	1096	multi-exon	FALSE	canonical	3	1312	junction_2	6.5	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGTGATAGGTATATTC	NA	False	NA	20	True	AATAAA	-15	NA	83541469	83548384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_83541684_83544737_83544971_83546957
ENSMUST00000094216.5	chr7	-	4433	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAGTTTCTCACAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	83533513	83529080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_83529100_83533500
ENSMUST00000094218.4	chr2	+	2275	13	FSM	ENSMUSG00000023393.16	ENSMUST00000094218.4	2275	13	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_2	30.6879455161143	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367055	180384073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180367245_180373672_180373871_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
ENSMUST00000094245.4	chr5	+	1259	1	FSM	ENSMUSG00000070473.5	ENSMUST00000094245.4	1259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCTGGAGCTTCCTTAT	5041	False	NA	38	True	AATAAA	-18	NA	135015067	135016326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135015100_135016300
ENSMUST00000094276.5	chr1	+	4204	2	FSM	ENSMUSG00000063659.12	ENSMUST00000094276.5	4204	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGCTTTTTGTA	NA	False	NA	7	True	AATAAA	-17	NA	177271860	177278330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_177272389_177274654
ENSMUST00000094280.4	chr5	-	915	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGCGTCCTTATTGT	2064	False	NA	-3	True	AATAAA	-18	NA	129916311	129909996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ENSMUST00000094280.4-0	chr5	-	715	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	197	3	0	0	multi-exon	FALSE	canonical	3	5311	junction_3	452.984424554409	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTAGCGTCCTTAT	2261	False	NA	-6	True	AATAAA	-15	NA	129916114	129909999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ENSMUST00000094294.5	chr11	+	1814	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	38.4013888637725	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATATATAGAAGAAACAA	NA	False	NA	NA	False	AAGAAA	-23	NA	43572884	43611238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
ENSMUST00000094312.12	chr7	+	3586	4	FSM	ENSMUSG00000070509.16	ENSMUST00000094312.12	3586	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.93025150224688	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCTGTTGGAGTTTAT	NA	False	NA	33	True	AGTAAA	-30	NA	73025267	73069647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_73025637_73041128_73041245_73058979_73059498_73067064
ENSMUST00000094324.8	chr9	+	3632	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_8	39.8577188898467	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704646	109722963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUST00000094329.11	chr2	-	3466	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_20	30.5759300757965	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168399	165131074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ENSMUST00000094339.3	chr7	-	2640	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGCCTAACATTTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	62114258	62111618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_62111600_62114300
ENSMUST00000094340.4	chr7	-	2547	1	FSM	ENSMUSG00000070527.4	ENSMUST00000094340.4	2547	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGACTCTTTTTTTAAT	NA	False	NA	0	True	AATAAA	-18	NA	62069887	62067340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_62067300_62069900
ENSMUST00000094357.11	chr5	+	1366	11	FSM	ENSMUSG00000029452.19	ENSMUST00000094357.11	1366	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.13400532171888	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAATCTCAGGTTC	NA	False	NA	NA	False	NA	NA	NA	121601214	121633457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121601334_121601849_121601897_121602861_121602926_121605916_121606049_121620395_121620501_121625812_121625863_121627310_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
ENSMUST00000094361.11	chr12	-	3281	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	0	0	0	0	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATTGGGTTGTA	NA	False	NA	NA	False	NA	NA	NA	110662829	110657038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUST00000094361.11-0	chr12	-	2752	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	106	423	0	0	multi-exon	FALSE	canonical	3	11114	junction_7	1521.95811046165	2819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662723	110657461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUST00000094378.10	chr3	+	2617	12	FSM	ENSMUSG00000042626.14	ENSMUST00000094378.10	2617	12	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	37.6308735565373	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACGCCTTTAATCACAGC	NA	False	NA	NA	False	NA	NA	NA	89328934	89336406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUST00000094398.13	chr7	-	4616	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGCTGTCTGATTAAG	NA	False	NA	NA	False	AATAAA	-18	NA	46608275	46572963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ENSMUST00000094398.13-1	chr7	-	4267	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	26	323	0	0	multi-exon	FALSE	canonical	2	49	junction_10	11.9551503476414	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATGTGAAAGGAAACTTT	NA	False	NA	-8	True	AATAAA	-19	NA	46608249	46573286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ENSMUST00000094421.11	chr2	+	7919	34	FSM	ENSMUSG00000038241.17	ENSMUST00000094421.11	7919	34	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	24.6653636764037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	12	True	AATAAA	-19	NA	155798477	155840820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812077_155812139_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ENSMUST00000094434.13	chr7	-	968	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	0	0	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	7359.57672393974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109308	45107367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ENSMUST00000094434.13-0	chr7	-	734	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	233	1	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	7359.57672393974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109075	45107368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ENSMUST00000094441.11	chr5	+	2882	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	9.3392838174146	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCTGTCACTGCTGC	NA	False	NA	15	True	AGTAAA	-18	NA	114845820	114860388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ENSMUST00000094452.4	chr5	+	4302	9	FSM	ENSMUSG00000063430.10	ENSMUST00000094452.4	4302	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	15.7276627316331	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGTTGTGTATGGCAT	NA	False	NA	14	True	ATTAAA	-24	NA	113638312	113727786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_113638807_113688483_113689396_113696409_113696525_113698961_113699147_113708697_113708820_113710299_113710475_113712079_113712245_113715323_113715525_113725853
ENSMUST00000094463.5	chr5	+	4767	2	FSM	ENSMUSG00000070576.5	ENSMUST00000094463.5	6860	2	2093	0	2093	0	multi-exon	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTGGGTGGGGCTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	111567400	111604899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_111569750_111602481
ENSMUST00000094467.6	chr2	+	2540	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	18.2695141678424	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTGCCTCATTAGTG	NA	False	NA	12	True	AATAAA	-17	NA	150590961	150613595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ENSMUST00000094469.6	chr11	+	707	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	6.04152298679729	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGAGTCTCTTCTTATTT	NA	False	NA	22	True	ACTAAA	-14	NA	3464866	3467351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
ENSMUST00000094471.10	chr11	+	2930	3	FSM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_2	176	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	6006	False	NA	NA	False	GATAAA	-17	NA	3239992	3245429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3241885_3243279_3243344_3244455
ENSMUST00000094493.5	chr4	+	780	1	FSM	ENSMUSG00000073716.7	ENSMUST00000094493.5	780	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGGTCTTTGCTAAGCC	NA	False	NA	NA	False	NA	NA	NA	146559788	146560568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146559800_146560600
ENSMUST00000094526.5	chr4	+	2094	4	FSM	ENSMUSG00000070619.6	ENSMUST00000094526.5	2094	4	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATACCACACCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	144084511	144090989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_144084551_144088178_144088493_144088970_144089562_144089839
ENSMUST00000094543.3-1	chr6	-	4564	5	FSM	ENSMUSG00000039159.17	ENSMUST00000094543.3	975	5	-17	-3572	0	0	multi-exon	FALSE	canonical	3	17	junction_2	148.302688782099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAACTTGATCTATCA	3	True	NA	-2	True	AATAAA	-22	NA	30304538	30211287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30215083_30221666_30221796_30260927_30261003_30262145_30262223_30304050
ENSMUST00000094544.3	chr4	-	905	2	FSM	ENSMUSG00000070637.3	ENSMUST00000094544.3	905	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGGGAGTCTGACCTTG	NA	False	NA	NA	False	AATAAA	-29	NA	141163416	141159982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141160768_141163296
ENSMUST00000094549.11	chr4	-	3203	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_2	123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTCCTGTCTCAT	NA	False	NA	0	True	AATACA	-31	NA	140867086	140840311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140843176_140845837_140846093_140867002
ENSMUST00000094549.11-0	chr4	-	876	3	FSM	ENSMUSG00000040842.18	ENSMUST00000094549.11	3203	3	9	2318	0	1248	multi-exon	FALSE	canonical	3	212	junction_2	123	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGCCTTTCTTTTTTT	NA	False	NA	-25	True	NA	NA	NA	140867077	140842629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140843176_140845837_140846093_140867002
ENSMUST00000094550.4	chrX	+	774	1	FSM	ENSMUSG00000070641.4	ENSMUST00000094550.4	774	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGTTCAAGCAGAACAAT	NA	False	NA	NA	False	NA	NA	NA	133390118	133390892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133390100_133390900
ENSMUST00000094578.11	chr5	-	4228	28	FSM	ENSMUSG00000035325.17	ENSMUST00000094578.11	4228	28	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	223.785378761883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100517454_100517494_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ENSMUST00000094583.2	chr7	-	1625	2	FSM	ENSMUSG00000019429.8	ENSMUST00000094583.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAATAATGTTTC	7666	False	NA	NA	False	AATAAA	-13	NA	30555603	30553754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30555330_30555553
ENSMUST00000094604.9	chr2	+	1928	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	15.4040238449986	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTGCTCTTGAATG	NA	False	NA	8	True	ATTAAA	-15	NA	125708026	125825507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUST00000094632.6	chr7	+	1868	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_5	21.0516824347446	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGAAGTGCTGGCTG	278	False	NA	25	True	AATAAA	-33	NA	28441426	28453296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUST00000094644.11	chr7	-	4623	19	FSM	ENSMUSG00000037552.18	ENSMUST00000094644.11	4623	19	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_17	6.01156293229048	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTTGCCTTTCTTGA	NA	False	NA	-1	True	NA	NA	NA	28071658	28059028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28060687_28061232_28062134_28062250_28062425_28063722_28063740_28063895_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069923_28070539_28070671_28071284
ENSMUST00000094646.6	chr1	-	4633	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTATGTTTTTCGTG	24	False	NA	NA	False	ATTAAA	-5	NA	106724458	106697159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ENSMUST00000094646.6-0	chr1	-	2843	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	61	1729	0	-1729	multi-exon	FALSE	canonical	3	455	junction_4	35.0793386482699	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTGGCTTTTATATGT	85	False	NA	-3	True	AGTAAA	-12	NA	106724397	106698888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ENSMUST00000094651.4	chr7	+	1751	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTGGGTTGTTTGAAA	NA	False	NA	NA	False	AATGAA	-15	NA	27977163	27978914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27977200_27978900
ENSMUST00000094653.6	chr2	-	822	1	FSM	ENSMUSG00000070708.6	ENSMUST00000094653.6	822	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	289	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGGGCTGTGCTGGTTGT	2669	False	NA	-3	True	AATAAA	-17	NA	162929775	162928953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_162929000_162929800
ENSMUST00000094657.10	chr4	+	1401	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	0	0	0	0	multi-exon	TRUE	canonical	3	2684	junction_8	233.065676097962	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2331	False	NA	19	True	AATAAA	-19	NA	132262860	132281053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUST00000094666.4	chr4	+	1370	1	FSM	ENSMUSG00000070720.5	ENSMUST00000094666.4	1370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGGCAGGGCTAACTACT	NA	False	NA	NA	False	NA	NA	NA	131649081	131650451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_131649100_131650500
ENSMUST00000094693.11	chr12	+	1527	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	0	0	0	0	multi-exon	FALSE	canonical	3	1278	junction_1	232.390680904869	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992277	80997281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUST00000094695.12	chr2	-	2249	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	0	0	0	0	multi-exon	TRUE	canonical	3	215	junction_12	29.1989107483291	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTTTGACTGTTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	118987515	118967481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ENSMUST00000094698.2	chr1	+	3851	16	FSM	ENSMUSG00000070732.3	ENSMUST00000094698.2	3851	16	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	27.1317771871533	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTCCAGTGCTTTCTGT	4264	False	NA	11	True	AATAAA	-17	NA	91072824	91098517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
ENSMUST00000094712.5	chr4	+	1120	3	FSM	ENSMUSG00000070737.11	ENSMUST00000094712.5	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	3.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019838	127023437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_127019987_127021611_127021793_127022646
ENSMUST00000094757.9	chr5	-	4643	6	FSM	ENSMUSG00000070780.12	ENSMUST00000094757.9	4643	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	16.5481116747501	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAAGACTTTCTTTTCC	NA	False	NA	-2	True	AATAAA	-16	NA	66238343	66173898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66238281
ENSMUST00000094761.11	chr4	+	3492	11	FSM	ENSMUSG00000042608.16	ENSMUST00000094761.11	3492	11	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_5	16.9944108459223	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTAGCCTGCCTCTG	NA	False	NA	22	True	AATAAA	-23	NA	125997764	126034822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_125997940_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ENSMUST00000094762.10	chr7	-	2209	12	FSM	ENSMUSG00000002983.18	ENSMUST00000094762.10	2209	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	93.6601911430821	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19363363	19340141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19356850_19356860_19361847_19361896_19363115
ENSMUST00000094769.13	chr4	+	2911	5	FSM	ENSMUSG00000044730.18	ENSMUST00000094769.13	2911	5	0	0	0	0	multi-exon	FALSE	non_canonical	3	27	junction_4	9.02773504263389	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGACATTTGGTAAATATA	NA	False	NA	5	True	AATAAA	-19	NA	124830866	124838449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
ENSMUST00000094782.10	chr4	+	3809	24	FSM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	0	0	0	0	multi-exon	FALSE	non_canonical	1	6	junction_2	64.214933278441	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124635642	124695304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124635710_124636256_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ENSMUST00000094801.5	chr2	-	3408	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	34.6292592408193	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTTTAAATATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	94237033	94158281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ENSMUST00000094807.6	chr7	+	4147	1	FSM	ENSMUSG00000070802.6	ENSMUST00000094807.6	4147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGTGGTCTGGAA	NA	False	NA	NA	False	AATGAA	-25	NA	16678606	16682753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16678600_16682800
ENSMUST00000094814.6	chr4	+	1249	1	FSM	ENSMUSG00000070803.7	ENSMUST00000094814.6	1249	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGTTTCCATTTCCTT	6119	False	NA	9	True	AATAAA	-18	NA	120523768	120525017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_120523800_120525000
ENSMUST00000094815.5	chr7	-	1875	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	0	0	0	0	multi-exon	FALSE	canonical	3	2941	junction_6	113.453115316416	3893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121710	16060974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUST00000094818.4	chr1	-	3065	5	FSM	ENSMUSG00000032997.17	ENSMUST00000094818.4	3065	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	56.2777709224521	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATGAGTGGAAACTGG	NA	False	NA	NA	False	AATAAA	-14	NA	75455951	75451218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75454913_75455057_75455435
ENSMUST00000094823.4	chr4	+	1585	4	FSM	ENSMUSG00000066058.12	ENSMUST00000094823.4	4168	4	0	2583	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGACATCATCCTATCTG	3400	False	NA	NA	False	NA	NA	NA	119112705	119117052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_119112993_119114082_119114248_119114348_119114434_119116004
ENSMUST00000094833.10	chr5	-	2806	8	FSM	ENSMUSG00000029127.16	ENSMUST00000094833.10	2978	8	3	169	0	0	multi-exon	FALSE	canonical	3	18	junction_5	10.0772526220277	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTATATTTTGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	38377798	38357592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
ENSMUST00000094835.9	chr2	-	1498	8	FSM	ENSMUSG00000040591.19	ENSMUST00000094835.9	1498	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	33.6470273423908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGAGTCTAAAGCCAG	NA	False	NA	-7	True	AATAAA	-18	NA	91275025	91108588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91274913
ENSMUST00000094853.9	chr4	-	1675	14	FSM	ENSMUSG00000028677.20	ENSMUST00000094853.9	1675	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	466.105531895842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTCCCCTTTGGTTGT	NA	False	NA	-11	True	TATAAA	-19	NA	117232654	117129123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117232510
ENSMUST00000094868.10	chr5	-	3983	13	FSM	ENSMUSG00000037224.16	ENSMUST00000094868.10	3983	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	9.95685135416256	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCTCTGGCGTCTTCTAT	NA	False	NA	-2	True	CATAAA	-18	NA	34445670	34352236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34353445_34353920_34354025_34354825_34354931_34356122_34356240_34356936_34357089_34373904_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
ENSMUST00000094870.3	chr7	-	1897	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	59	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCCTGTTTCTTGA	9626	False	NA	-1	True	AATAAA	-20	NA	6158970	6134489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_6136171_6146060_6146150_6158843
ENSMUST00000094897.5	chr7	-	2224	12	FSM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	6.85022772137618	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGTCTCCAGTGCCAAGA	NA	False	NA	1	True	AATAAA	-35	NA	4535452	4525931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185_4535275_4535376
ENSMUST00000094898.5	chr1	+	2923	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	18.3632752128592	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGGCGAGTGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	64730503	64764799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ENSMUST00000094917.10	chr1	-	1869	13	FSM	ENSMUSG00000038079.15	ENSMUST00000094917.10	1869	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	71.220851737551	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTAACTGAAGGTTT	4052	False	NA	-10	True	AATAAA	-24	NA	59159253	59139748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59156489_59156501_59157133_59157166_59159110
ENSMUST00000094933.5	chr4	+	10575	68	FSM	ENSMUSG00000028514.16	ENSMUST00000094933.5	10575	68	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_13	48.8076771804264	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAATTGGAGTCTCACA	NA	False	NA	12	True	AATAAA	-12	NA	106173430	106298519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106173984_106198410_106198577_106199538_106199607_106203731_106203876_106204475_106204599_106209129_106209166_106209878_106209945_106212870_106212937_106215596_106215672_106216212_106216372_106217319_106217435_106217614_106217719_106219099_106219208_106219353_106219450_106219534_106219697_106219884_106219933_106225223_106225332_106225919_106226070_106227265_106227398_106228180_106228293_106229884_106229962_106230855_106230997_106231187_106231242_106232843_106232960_106234525_106234593_106234705_106234817_106236235_106236335_106236425_106236600_106237265_106237352_106237624_106237719_106239431_106239588_106242619_106242718_106244675_106244772_106244886_106245116_106245697_106245858_106247389_106247546_106249554_106249626_106254365_106254527_106256246_106256309_106258167_106258360_106259236_106259355_106261120_106261266_106263587_106263708_106264209_106264336_106265133_106265233_106266008_106266092_106266480_106266623_106266807_106266928_106267328_106267550_106267980_106268106_106268496_106268639_106269288_106269440_106270775_106270872_106271571_106271676_106273164_106273279_106275388_106275486_106277630_106277748_106278155_106278249_106280656_106280760_106282501_106282624_106283682_106283797_106285684_106285751_106287721_106287789_106288810_106288890_106292175_106292252_106293529_106293617_106293941_106294053_106295973
ENSMUST00000094993.3	chr4	-	4174	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTGTATTGCTTTTTT	NA	False	NA	-1	True	NA	NA	NA	88640702	88636528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_88636500_88640700
ENSMUST00000095014.8	chr1	-	5607	13	FSM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	15.5393765068687	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCTCACTCTAAGGTC	7783	False	NA	61	True	AATAAA	-33	NA	43137782	43086359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
ENSMUST00000095017.11	chr5	-	3498	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	37.579706957346	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGATTTTGAGCCATGCA	NA	False	NA	-5	True	AATAAA	-20	NA	9211749	9168871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ENSMUST00000095027.9	chr1	-	5857	22	FSM	ENSMUSG00000037138.19	ENSMUST00000095027.9	5857	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	2.0995626366713	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGCAGCACTGCGAC	NA	False	NA	0	True	AATATA	-15	NA	38666266	38216406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_38218652_38220340_38220565_38220695_38220746_38224405_38224500_38226016_38226089_38230251_38230389_38232646_38232711_38242891_38243020_38243970_38244173_38246986_38247112_38248633_38249729_38257343_38257537_38291721_38291763_38308790_38308843_38359192_38359245_38368952_38368990_38380801_38380883_38445576_38445625_38573986_38574373_38574491_38574805_38575906_38576028_38666169
ENSMUST00000095035.3	chr2	-	4925	2	FSM	ENSMUSG00000026788.14	ENSMUST00000095035.3	4925	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTGTTTTCACTCAT	1265	False	NA	-1	True	AATAAA	-25	NA	33352365	33340298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33345136_33352277
ENSMUST00000095044.10	chr2	+	2394	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	28.6225435627234	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	3369	False	NA	7	True	AATAAA	-16	NA	32497037	32510818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUST00000095048.6	chr6	-	1275	6	FSM	ENSMUSG00000079477.10	ENSMUST00000095048.6	1275	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	730.09467879173	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTAATGCTTGTTACTT	3756	False	NA	NA	False	NA	NA	NA	87996765	87976921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87996617
ENSMUST00000095050.5	chr1	+	1513	1	FSM	ENSMUSG00000070960.5	ENSMUST00000095050.5	1513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGCCTGCTGCTCTGCTCC	NA	False	NA	NA	False	NA	NA	NA	31654229	31655742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_31654200_31655700
ENSMUST00000095063.11	chr4	-	3237	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_4	41.7814252988095	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	-28	True	NA	NA	False	NA	NA	NA	59783866	59769636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ENSMUST00000095070.4	chr4	+	1434	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	0	2589	0	301	multi-exon	FALSE	canonical	3	77	junction_1	16.2685791225499	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGTGTGAAGTGT	3	True	NA	5	True	NA	NA	NA	59003171	59022984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
ENSMUST00000095078.3	chr2	+	4301	4	FSM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	22.6028513442196	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGAGGTCTCCATGC	NA	False	NA	7	True	AATAAA	-15	NA	30127733	30153802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859
ENSMUST00000095083.11	chr2	+	7883	56	FSM	ENSMUSG00000057738.15	ENSMUST00000095083.11	7883	56	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_22	102.057131949797	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855691	29921463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ENSMUST00000095128.10	chr4	-	659	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	2502	junction_3	28.8251433455046	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTAGCTACTTTTTTCT	-10	True	NA	63	True	AGTAAA	-20	NA	40279421	40270590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
ENSMUST00000095143.9	chr4	+	3147	3	FSM	ENSMUSG00000052137.12	ENSMUST00000095143.9	3147	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	14.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAGATTCCTGAATTCAT	54	False	NA	NA	False	TTTAAA	-25	NA	12089438	12095922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_12089728_12092522_12092573_12093114
ENSMUST00000095144.10	chr4	-	2506	3	FSM	ENSMUSG00000049225.15	ENSMUST00000095144.10	2506	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	21.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	487	False	NA	NA	False	AATAAA	-20	NA	11965927	11959806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11962234_11965613_11965649_11965883
ENSMUST00000095145.12	chr4	+	2403	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	85.9883713068226	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATATATTGAATTTAT	-5	True	NA	NA	False	AATAAA	-9	NA	11558941	11585744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
ENSMUST00000095157.11	chr14	-	2666	11	FSM	ENSMUSG00000068245.15	ENSMUST00000095157.11	2666	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	111.176481325863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGTTGCATCAAAATAT	NA	False	NA	NA	False	AATAAA	-27	NA	59602919	59584855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59602815
ENSMUST00000095176.12	chr8	+	3108	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCACCGTGTGATTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	112263473	112350410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
ENSMUST00000095176.12-0	chr8	+	2736	4	FSM	ENSMUSG00000033545.15	ENSMUST00000095176.12	3108	4	-333	705	-131	100	multi-exon	FALSE	canonical	3	106	junction_3	7.78888096369861	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	False	NA	13	True	TATAAA	-4	NA	112263140	112349705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227
ENSMUST00000095187.4	chr17	-	3530	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	11.0027269347194	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTGCTGTTCATTG	NA	False	NA	-1	True	AATAAA	-15	NA	86452603	86292092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ENSMUST00000095188.7	chr17	+	1595	11	FSM	ENSMUSG00000071037.7	ENSMUST00000095188.7	1595	11	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_6	13.9484766193302	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATTGTTTCAATCTATC	2173	False	NA	10	True	AATAAA	-26	NA	85397979	85766016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_85398292_85403917_85404091_85421210_85421276_85699000_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
ENSMUST00000095214.10	chr8	+	1731	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	26.3256528883901	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTAGTGGTTAGAGATT	NA	False	NA	9	True	AATAAA	-11	NA	88845396	88861734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ENSMUST00000095220.4	chr8	+	1907	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_4	11.5864970366477	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTGAGCTTTCTGT	NA	False	NA	22	True	AATAAA	-22	NA	85786683	85793750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUST00000095224.11	chr17	+	3106	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_6	66.4862955803675	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	8062	False	NA	35	True	AATAAA	-26	NA	56892058	56913294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ENSMUST00000095228.5	chr8	+	2265	5	FSM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	22.3941956765587	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTCATTTTCTGTA	1068	False	NA	23	True	AATAAA	-10	NA	84724129	84727038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ENSMUST00000095259.10	chr8	+	2109	8	FSM	ENSMUSG00000007610.16	ENSMUST00000095259.10	2109	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	25.5774135055258	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTTTCCCTCGAACT	NA	False	NA	139	True	NA	NA	NA	71941364	71946044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ENSMUST00000095263.10	chr17	+	1515	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	0	520	0	0	multi-exon	FALSE	canonical	3	158	junction_8	7.84219357067906	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTAGCTCCTGTTGGC	2580	False	NA	23	True	ATTAAA	-18	NA	46559005	46562943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUST00000095266.3	chr10	-	1675	2	FSM	ENSMUSG00000040258.7	ENSMUST00000095266.3	1675	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCGCCTGTGTTAAGA	127	False	NA	NA	False	AATAAA	-10	NA	127370428	127361341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127362833_127370244
ENSMUST00000095267.8	chr8	+	1667	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1815	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTGTCCGCCTCCTT	NA	False	NA	34	True	AGTAAA	-16	NA	71151598	71153265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71151600_71153300
ENSMUST00000095273.7	chr8	+	1161	5	FSM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	248.840310239318	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACCAAACACCCCA	461	False	NA	9	True	NA	NA	NA	70583996	70586389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236_70585305_70585746
ENSMUST00000095310.3	chr10	+	7117	23	FSM	ENSMUSG00000020189.16	ENSMUST00000095310.3	3622	23	0	-3495	0	0	multi-exon	FALSE	canonical	2	6	junction_2	18.6097370763154	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCCAGTGACTCTT	NA	False	NA	7	True	AATAAA	-18	NA	111000662	111133110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111001058_111040595_111040702_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ENSMUST00000095313.5	chr10	+	1745	7	FSM	ENSMUSG00000035873.9	ENSMUST00000095313.5	1745	7	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_1	62.4179461373089	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCCCAGTAGTAATAGAT	5598	False	NA	NA	False	NA	NA	NA	108167981	108250101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_108168110_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
ENSMUST00000095347.13	chr17	-	2617	12	FSM	ENSMUSG00000024335.21	ENSMUST00000095347.13	2617	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	131.068589702535	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGTATGGGTGGGAGTG	7112	False	NA	NA	False	NA	NA	NA	34337463	34331336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337429
ENSMUST00000095349.6	chr8	-	2808	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGTCAGCTTGTGAAT	4670	False	NA	NA	False	AATAAA	-21	NA	34131995	34109613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ENSMUST00000095349.6-0	chr8	-	1641	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	0	1167	0	-1167	multi-exon	FALSE	canonical	3	227	junction_7	19.9335631229219	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCTTAAGGTATCTTT	4670	False	NA	0	True	NA	NA	NA	34131995	34110780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ENSMUST00000095383.6	chr10	+	3616	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	7	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGAATGTTTCATAAAG	NA	False	NA	17	True	AATAAA	-17	NA	84938490	84953449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_84938862_84946662_84946730_84950271
ENSMUST00000095385.5	chr10	+	2909	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	11.5325625946708	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTGTGTGTGTGTTTC	NA	False	NA	22	True	AATAAA	-23	NA	84753519	84852311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ENSMUST00000095410.8	chr12	+	2384	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	4	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	5346	False	NA	19	True	AATAAA	-18	NA	110704425	110761462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110704712_110745729_110745913_110759547
ENSMUST00000095427.12	chr17	-	1952	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_4	200.604458475704	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAAGCCTCTTATTTAT	NA	False	NA	-5	True	AATAAA	-25	NA	29566908	29551045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ENSMUST00000095438.10	chr8	-	2838	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	0	0	0	0	multi-exon	TRUE	canonical	2	24	junction_4	7.05730511991338	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTGTTAGTATCTA	NA	False	NA	-3	True	NA	NA	NA	19000991	18982744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
ENSMUST00000095456.10	chr8	+	5261	30	FSM	ENSMUSG00000031442.22	ENSMUST00000095456.10	3926	30	121	-1456	0	0	multi-exon	FALSE	canonical	3	19	junction_2	5.78098074781942	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTGGTTATGTGTTA	8025	False	NA	19	True	AATAAA	-26	NA	12923947	13070509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ENSMUST00000095457.11	chr10	+	2598	13	FSM	ENSMUSG00000006498.17	ENSMUST00000095457.11	2598	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	485.428926883798	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1624	False	NA	31	True	ATTAAA	-15	NA	79690501	79700193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694905_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUST00000095458.6	chr13	+	1918	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	47	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	108180979	108185706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108181021_108182958_108183103_108183973
ENSMUST00000095476.6	chr8	-	4057	2	FSM	ENSMUSG00000049717.10	ENSMUST00000095476.6	5028	2	0	971	0	857	multi-exon	FALSE	canonical	2	7	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAACTTTATGTTCCTTT	NA	False	NA	-4	True	NA	NA	NA	10026299	10020019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_10023808_10026030
ENSMUST00000095517.12	chr8	-	4476	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	10.356157588604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	107783321	107772920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ENSMUST00000095541.11	chr10	-	3151	15	FSM	ENSMUSG00000006342.16	ENSMUST00000095541.11	3151	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.246768243294	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTCCCGTCTGTTTGT	NA	False	NA	-1	True	NA	NA	NA	75479825	75472539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75473205_75473334_75473441_75473515_75473693_75473798_75474072_75474180_75474430_75475175_75475335_75475428_75475573_75475667_75475937_75476022_75476109_75476289_75476492_75476608_75476784_75477266_75477435_75477958_75478111_75478296_75478505_75479707
ENSMUST00000095579.11	chr17	-	1450	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_13	93.5049281997111	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	754	False	NA	-21	True	AATAAA	-14	NA	23892856	23887591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ENSMUST00000095580.3	chr10	-	5246	20	FSM	ENSMUSG00000020067.9	ENSMUST00000095580.3	5246	20	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_11	6.54919588644307	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCATG	NA	False	NA	NA	False	AATAAA	-12	NA	63039731	62951573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680_62957889_62959049_62959177_62961447_62961528_62963406_62963557_62966761_62966984_62970711_62970851_62971486_62972075_62981614_62981988_62983655_62983773_62985801_62985826_62988573_62988716_62998000_62998073_62999291_62999404_63003011_63003064_63005033_63005210_63028165_63029063_63039496
ENSMUST00000095595.9	chr17	+	2698	6	FSM	ENSMUSG00000023902.19	ENSMUST00000095595.9	2698	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	55.9335319821661	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	879	False	NA	28	True	AGTAAA	-12	NA	23819829	23829986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
ENSMUST00000095606.5	chr17	-	2686	6	FSM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	6.49923072370877	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCTTTAGCTGGC	6684	False	NA	NA	False	AATAAA	-20	NA	23783212	23775740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782942
ENSMUST00000095615.3	chr17	-	4078	3	FSM	ENSMUSG00000059142.17	ENSMUST00000095615.3	4078	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGTCCTTTGGGCAGT	NA	False	NA	NA	False	AATAAA	-26	NA	23080693	23068003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23071741_23076223_23076351_23080479
ENSMUST00000095725.11	chr10	+	2127	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	6.25316246521123	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAAGTGTCTGCCTTTC	NA	False	NA	NA	False	ATTAAA	-28	NA	43097481	43316598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
ENSMUST00000095739.10	chr13	-	3689	11	FSM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_10	200.252240936275	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823594	59782809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59822774_59822911_59823540
ENSMUST00000095752.9	chr6	+	3130	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	49.110770393011	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTAAACTTCTACA	9775	False	NA	22	True	AATAAA	-24	NA	86381294	86409167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ENSMUST00000095753.9	chr6	+	4477	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTAAAGTTCTTTTTT	9681	False	NA	NA	False	AATAAA	-15	NA	86381200	86410387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ENSMUST00000095753.9-0	chr6	+	3172	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	85	1220	0	0	multi-exon	FALSE	canonical	3	90	junction_5	36.3397356744499	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTAAACTTCTACA	9766	False	NA	22	True	AATAAA	-24	NA	86381285	86409167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ENSMUST00000095757.4	chr6	-	3019	4	FSM	ENSMUSG00000068299.12	ENSMUST00000095757.4	3019	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	4.49691252107735	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGGGTGGATCTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	85881866	85876032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85878596_85878934_85879080_85879173_85879312_85881693
ENSMUST00000095767.11	chr12	+	3154	13	FSM	ENSMUSG00000004151.18	ENSMUST00000095767.11	6576	13	237	3185	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	7.23225798458238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTGCTGTTCGTTT	562	False	NA	NA	False	NA	NA	NA	38830317	38917298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ENSMUST00000095786.6	chr6	-	1769	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCTTGAAGTGTCTTA	NA	False	NA	1	True	ATTAAA	-27	NA	82629910	82623681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ENSMUST00000095786.6-1	chr6	-	1095	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	59	615	0	0	multi-exon	FALSE	canonical	3	735	junction_3	133.522365999941	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGTGATATAAAATTT	NA	False	NA	-36	True	NA	NA	NA	82629851	82624296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ENSMUST00000095793.3	chr14	+	5264	37	FSM	ENSMUSG00000000365.10	ENSMUST00000095793.3	5264	37	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_25	208.622769314721	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640037	56762489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56745274_56745401_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
ENSMUST00000095794.4	chr10	-	1195	7	FSM	ENSMUSG00000071359.14	ENSMUST00000095794.4	1195	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	96.5702104976248	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTCTCTTCATATC	NA	False	NA	-15	True	AATAAA	-8	NA	22607837	22581279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607681
ENSMUST00000095795.5	chr10	+	1271	7	FSM	ENSMUSG00000078452.11	ENSMUST00000095795.5	1271	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.4402924527893	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	22237792	22250038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_22237809_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ENSMUST00000095797.6	chr13	+	4434	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_1	64.2227374066226	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51254915	51306582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ENSMUST00000095806.10	chr10	+	5450	30	FSM	ENSMUSG00000071369.12	ENSMUST00000095806.10	5450	30	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	5.46244338667921	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGGAATGTGCATTCC	NA	False	NA	NA	False	AATAAA	-15	NA	19810217	20018499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_19810821_19876311_19876452_19895303_19895328_19899353_19899548_19900630_19900800_19901926_19902034_19904778_19904950_19922117_19922231_19932220_19932381_19934682_19934837_19943574_19943683_19952227_19952278_19954987_19955084_19958132_19958215_19970107_19970242_19975250_19975379_19975806_19975944_19979905_19980012_19983894_19984053_19986463_19986642_19987523_19987545_19993890_19994069_19994160_19994330_20000697_20000884_20003397_20003504_20007710_20007955_20012639_20012753_20014008_20014122_20016394_20016472_20017268
ENSMUST00000095893.11	chr10	+	2429	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.5927260985754	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCACTGGTTTTTATTTG	NA	False	NA	9	True	AATAAA	-18	NA	4382466	4405141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUST00000095903.7	chr12	-	3177	3	FSM	ENSMUSG00000112308.2_ENSMUSG00000071456.7	ENSMUST00000095903.7	1923	3	-7	-1247	0	-185	multi-exon	FALSE	canonical	3	62	junction_1	5.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTAAAATAGAAATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	3476747	3454062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_3456712_3457643_3457925_3476500
ENSMUST00000095914.7	chr13	+	3015	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.61001089323561	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGTGCAGTGTGTTCT	NA	False	NA	9	True	AATAAA	-22	NA	30844083	30895214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ENSMUST00000095925.5	chr14	+	1372	6	FSM	ENSMUSG00000068417.9	ENSMUST00000095925.5	1372	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	36.6911433454996	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTTGCTTGTCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	51193448	51202206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_51193686_51196971_51197142_51200561_51200666_51200846_51201023_51201135_51201327_51201712
ENSMUST00000095932.5	chr14	-	1509	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	17.4419672692682	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCTTTTTGGC	8876	False	NA	1	True	AATAAA	-20	NA	51033185	51026704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
ENSMUST00000095944.10	chr6	-	3184	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	33.5463857963865	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGAGTGTTTCCTGTTTGC	NA	False	NA	-3	True	AATAGA	-14	NA	48025845	48001138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
ENSMUST00000095950.3	chr19	+	3405	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	16.8219972606327	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGTTTTAAATGTTCCG	NA	False	NA	45	True	ATTAAA	-15	NA	55304782	55614993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ENSMUST00000095978.5	chr19	-	901	1	FSM	ENSMUSG00000071497.5	ENSMUST00000095978.5	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1482	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53577499	53576598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_53576600_53577500
ENSMUST00000095998.7	chr19	-	3760	2	FSM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGAGTAGAGTTTGC	6774	False	NA	NA	False	ATTAAA	-16	NA	47907738	47883040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47886625_47907562
ENSMUST00000096014.5	chr19	-	362	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	3	3669	junction_3	1157.30270696804	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGGTTGTCTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	47079082	47071906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
ENSMUST00000096020.7	chr10	+	468	1	FSM	ENSMUSG00000071532.7	ENSMUST00000096020.7	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1082	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAGTCCAGATGGCT	7726	False	NA	NA	False	NA	NA	NA	14398821	14399289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_14398800_14399300
ENSMUST00000096030.7	chr6	-	2276	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_3	4.14578098794425	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTCTGTCCCAGAGGT	NA	False	NA	NA	False	AATAAA	-45	NA	38614168	38603594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
ENSMUST00000096045.9	chr16	+	1479	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_4	76.5188792971309	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104097	48114600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ENSMUST00000096052.9	chr16	-	1746	7	FSM	ENSMUSG00000022656.16	ENSMUST00000096052.9	1746	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	112.29784305834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCCTTCCACTAGGAGCT	NA	False	NA	NA	False	NA	NA	NA	46317215	46256341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_46256802_46258292_46258432_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ENSMUST00000096053.5	chr19	+	6249	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_11	22.2601092848611	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTCACCTTTCAGAA	1043	False	NA	-7	True	NA	NA	NA	44919589	44971627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ENSMUST00000096057.5	chr16	-	1240	4	FSM	ENSMUSG00000022658.11	ENSMUST00000096057.5	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	1.63299316185545	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGAGTATAACTTTATT	NA	False	NA	-9	True	AATAAA	-15	NA	45544971	45531592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_45532073_45533294_45533398_45543285_45543461_45544489
ENSMUST00000096069.5	chr13	-	8338	20	FSM	ENSMUSG00000033799.11	ENSMUST00000096069.5	8338	20	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	12.4522356123369	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTCTGTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	3661108	3616034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649836_3649857_3649938_3650063_3650191_3650335_3660789
ENSMUST00000096096.12	chr19	+	2366	9	FSM	ENSMUSG00000024989.16	ENSMUST00000096096.12	2366	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	113.762636660724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043487	38062869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38043530_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUST00000096109.11	chr16	-	993	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_3	17.8258239641258	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAACTGGTTAGTTTG	NA	False	NA	-8	True	AATAAA	-22	NA	31918556	31903241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
ENSMUST00000096114.13	chr19	-	1597	7	FSM	ENSMUSG00000071573.15	ENSMUST00000096114.13	1597	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	3.8151743807532	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCGTTTTATAGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	33369665	33115146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33367316_33367460_33368479_33368586_33369354
ENSMUST00000096164.6	chr19	-	2548	11	FSM	ENSMUSG00000071604.6	ENSMUST00000096164.6	2548	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	7.73627817493658	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTAGTGTTTGTG	NA	False	NA	-4	True	AATAAA	-24	NA	24008383	23950113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_23950996_23952724_23953018_23955325_23955479_23956753_23956833_23956949_23957080_23962072_23962207_23963772_23963881_23965810_23965940_23972144_23972256_23998969_23999027_24007911
ENSMUST00000096194.9	chr19	+	6667	25	FSM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	23.4529301059709	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTATTTGTGAATC	NA	False	NA	20	True	AATAAA	-26	NA	21755705	21835691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ENSMUST00000096224.6	chr15	-	6038	22	FSM	ENSMUSG00000022994.10	ENSMUST00000096224.6	6038	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.08379111207058	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTCTCTGCAGCTGT	NA	False	NA	NA	False	AATAAA	-36	NA	98505514	98487853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494397_98494557_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498052_98498171_98498275_98498398_98498791_98498942_98501754_98502614_98505361
ENSMUST00000096229.11	chr16	-	3966	19	FSM	ENSMUSG00000022789.16	ENSMUST00000096229.11	3966	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_16	431.23241420576	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATTCTTTCTGATGTGC	NA	False	NA	-10	True	AATAAA	-26	NA	16176802	16130096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
ENSMUST00000096234.4	chr16	-	3470	5	FSM	ENSMUSG00000022674.16	ENSMUST00000096234.4	609	5	0	-2861	0	-771	multi-exon	FALSE	canonical	2	4	junction_4	568.153808400507	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATATACTTTTCTAGA	NA	False	NA	-6	True	AATAAA	-22	NA	15412354	15371311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15411554_15411623_15412323
ENSMUST00000096239.7	chr19	+	2753	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_7	18.3234822018087	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTTCTTTTGCATAC	1357	False	NA	11	True	AATAAA	-26	NA	8931210	8943574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ENSMUST00000096240.3	chr19	+	3135	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_3	72.954410564141	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	3469	False	NA	20	True	AATAAA	-24	NA	8919238	8929667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUST00000096241.6	chr19	+	3322	22	FSM	ENSMUSG00000071647.6	ENSMUST00000096241.6	3322	22	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	12.0183155765295	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	1915	False	NA	6	True	AATAAA	-14	NA	8906915	8918946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ENSMUST00000096243.7	chr19	+	1603	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	18.060661671157	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4712	False	NA	19	True	AATAAA	-16	NA	8897737	8904600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
ENSMUST00000096246.5	chr19	+	3860	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_6	273.686404967234	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1893	False	NA	-56	True	GATAAA	-42	NA	8875464	8894036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUST00000096249.7	chr19	+	3274	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCAGTGTTTCTATCTG	NA	False	NA	20	True	AATAAA	-21	NA	8870368	8875252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8870513_8872122
ENSMUST00000096250.5	chr15	+	8507	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	16.8330032970947	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGATAAGTGACTTC	NA	False	NA	18	True	AATAAA	-19	NA	96185453	96302873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ENSMUST00000096251.10	chr19	+	806	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	0	0	0	0	multi-exon	FALSE	canonical	3	2965	junction_2	196.086715511276	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAACATTTGCCAGGC	NA	False	NA	NA	False	NA	NA	NA	8866216	8868245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
ENSMUST00000096253.7	chr19	-	821	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTGGAAAGACCATCTC	NA	False	NA	-8	True	AATGAA	-25	NA	8858287	8857377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8857981_8858069
ENSMUST00000096253.7-0	chr19	-	570	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	0	251	0	-251	multi-exon	FALSE	canonical	3	500	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCGCAGCTGGACATCTAA	NA	False	NA	-6	True	AATAAA	-23	NA	8858287	8857628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8857981_8858069
ENSMUST00000096255.7	chr19	+	1127	8	FSM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_3	101.556257657457	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	6013	False	NA	33	True	AATAAA	-21	NA	8849023	8853028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUST00000096257.3	chr19	+	2583	2	FSM	ENSMUSG00000071656.8	ENSMUST00000096257.3	2583	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATATACAGACTTTTGT	1435	False	NA	NA	False	ATTAAA	-19	NA	8828148	8831273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8828477_8829018
ENSMUST00000096259.6	chr19	-	764	3	FSM	ENSMUSG00000071658.6	ENSMUST00000096259.6	1643	3	0	879	0	-879	multi-exon	TRUE	canonical	3	189	junction_2	8	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACAACGTCTGTGTTAG	4762	False	NA	-6	True	AATAAA	-17	NA	8816558	8815175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8815636_8815917_8816018_8816354
ENSMUST00000096261.5	chr19	-	890	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_5	79.6292429106959	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775941	8770490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ENSMUST00000096265.10	chrX	+	3210	4	FSM	ENSMUSG00000071665.11	ENSMUST00000096265.10	3210	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGAGTTGATGTTTCTT	NA	False	NA	NA	False	AATAAA	-11	NA	151901781	151915857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_151901847_151902010_151902087_151909895_151909940_151912832
ENSMUST00000096272.11	chr16	-	2663	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	6.59966329107444	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAAAAACAA	NA	False	NA	-40	True	NA	NA	NA	11727287	11621584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
ENSMUST00000096313.4	chrX	+	5094	21	FSM	ENSMUSG00000042473.9	ENSMUST00000096313.4	5094	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.5644487847162	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTGGGATAGCATTGT	NA	False	NA	NA	False	NA	NA	NA	138585744	138654154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_138586060_138601747_138601859_138605350_138605470_138606704_138606931_138607865_138608107_138613002_138613211_138614003_138614169_138624651_138624802_138625826_138625978_138626412_138626628_138633006_138633125_138634703_138634990_138637037_138637168_138637702_138637802_138642675_138642745_138642900_138643142_138644104_138644171_138645956_138646041_138647099_138647157_138650696_138650795_138652209
ENSMUST00000096316.4	chrX	-	892	7	FSM	ENSMUSG00000031388.15	ENSMUST00000096316.4	892	7	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	37.306910292271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCCTGGGGAGGTACT	NA	False	NA	NA	False	ACTAAA	-29	NA	72965434	72961079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000096321.3	chrX	+	2779	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	8.05536398239638	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643481	134648071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
ENSMUST00000096348.10	chrX	-	4151	23	FSM	ENSMUSG00000025665.17	ENSMUST00000096348.10	4151	23	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	39.3304500040447	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTAGTCTTGGTGTAGT	NA	False	NA	-6	True	ATTAAA	-31	NA	110372892	110297888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ENSMUST00000096350.11	chr15	+	1958	3	FSM	ENSMUSG00000042622.15	ENSMUST00000096350.11	1958	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTGTATGTCTTGGAC	2265	False	NA	22	True	AATAAA	-23	NA	79231719	79243276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79231955_79241166_79241234_79241620
ENSMUST00000096363.3	chrX	+	3909	3	FSM	ENSMUSG00000071719.3	ENSMUST00000096363.3	3909	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	4.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTCTCTTGGTGGATTT	NA	False	NA	NA	False	AATAAA	-15	NA	98864626	98892396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_98865533_98888994_98889167_98889565
ENSMUST00000096367.5	chrX	-	4173	1	FSM	ENSMUSG00000071722.5	ENSMUST00000096367.5	4173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGTAGTGACTTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	94070288	94066115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_94066100_94070300
ENSMUST00000096368.4	chrX	+	2491	1	FSM	ENSMUSG00000071723.8	ENSMUST00000096368.4	2491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTTGAATAATGCT	4256	False	NA	22	True	AATAAA	-28	NA	93679674	93682165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_93679700_93682200
ENSMUST00000096369.10	chrX	+	3944	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAGTAAGGACTTTTC	NA	False	NA	NA	False	NA	NA	NA	93278592	93299574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
ENSMUST00000096369.10-0	chrX	+	2100	4	FSM	ENSMUSG00000043929.17	ENSMUST00000096369.10	3944	4	-57	1901	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6.59966329107444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGCCTGGCATGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	93278535	93297673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020
ENSMUST00000096378.3	chrX	-	2401	3	FSM	ENSMUSG00000035427.19	ENSMUST00000096378.3	2401	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	7	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGAGATTTTATTCT	NA	False	NA	NA	False	AATAAA	-10	NA	85348699	85293861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_85296089_85298945_85299028_85348607
ENSMUST00000096385.11	chr15	+	5268	44	FSM	ENSMUSG00000022558.17	ENSMUST00000096385.11	5268	44	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	19.8740490552834	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTGACATTGTATCAAT	NA	False	NA	10	True	AATAAA	-16	NA	76264712	76337238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUST00000096386.13	chr10	+	3144	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTTAGTCACCCCCCT	315	False	NA	NA	False	AATAAA	-17	NA	128247614	128276207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUST00000096386.13-0	chr10	+	2321	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	-89	912	0	0	multi-exon	FALSE	canonical	3	111	junction_5	11.6535640709422	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCCCTTTCTTTGGC	226	False	NA	NA	False	AAGAAA	-38	NA	128247525	128275295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUST00000096420.3	chrX	+	4226	1	FSM	ENSMUSG00000071748.3	ENSMUST00000096420.3	4226	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATACA	NA	False	NA	NA	False	ATTAAA	-17	NA	67864698	67868924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67864700_67868900
ENSMUST00000096430.11	chr15	+	4376	4	FSM	ENSMUSG00000071757.11	ENSMUST00000096430.11	4376	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCTCCCTGTTCTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	57558060	57703228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_57558401_57626041_57626116_57684427_57687148_57701986
ENSMUST00000096433.10	chr15	+	8547	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	6.05702071979286	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGCTGACTTTTTCTC	NA	False	NA	10	True	AATAAA	-21	NA	54975712	55122667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ENSMUST00000096441.5	chr11	+	5656	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	0	0	0	0	multi-exon	FALSE	canonical	2	298	junction_20	51.0520361983731	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599190	3640477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ENSMUST00000096447.9	chrX	-	1773	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	3.77359245282264	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCCTAAGCACAACGACT	NA	False	NA	NA	False	AATAAA	-20	NA	52459379	52433884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
ENSMUST00000096452.7	chr5	+	5181	2	FSM	ENSMUSG00000097392.5	ENSMUST00000096452.7	5181	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGACTCAGCCAAAAGTG	NA	False	NA	NA	False	CATAAA	-22	NA	104656217	104670249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104656438_104665288
ENSMUST00000096482.10	chr15	-	3118	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	0	0	0	0	multi-exon	TRUE	canonical	3	163	junction_7	20.0690167197789	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGAGCTGCTTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	9140452	9112072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
ENSMUST00000096495.11	chrX	-	6963	31	FSM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	16.6631996393917	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACTCTCTTTGGTGAAG	NA	False	NA	-3	True	AATAAA	-28	NA	12628312	12541607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ENSMUST00000096509.7	chrX	+	841	1	FSM	ENSMUSG00000071815.7	ENSMUST00000096509.7	841	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCAAGTTGATGTTTAAA	6682	False	NA	31	True	AATAAA	-31	NA	8899731	8900572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_8899700_8900600
ENSMUST00000096575.5	chr18	+	10684	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	3.53055856062465	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGTATGGATATGGT	NA	False	NA	8	True	AATAAA	-24	NA	32296248	32369804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ENSMUST00000096639.12	chr7	-	2249	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_4	49.7203114933927	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCCTTTTTTTTTTTGCC	NA	False	NA	0	True	AATAAA	-34	NA	101714365	101668343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ENSMUST00000096744.8	chr7	+	2813	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	308.5	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGACTCATGCTTTCT	230	False	NA	14	True	AATATA	-8	NA	3339058	3347865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3339156_3341727_3341816_3345237
ENSMUST00000096751.11	chr19	-	3509	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_3	24.7116706571342	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGCATCTTAGAAATT	1885	False	NA	-13	True	AATAAA	-11	NA	8796697	8786438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ENSMUST00000096753.5	chr19	+	5118	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTATCTCCTGTGGCT	NA	False	NA	15	True	AATAAA	-18	NA	8797373	8811507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ENSMUST00000096753.5-0	chr19	+	3034	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	0	2084	0	-2084	multi-exon	FALSE	canonical	3	91	junction_1	16.0266050992067	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGCACCAACTAACCG	NA	False	NA	8	True	AATAAA	-18	NA	8797373	8809423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ENSMUST00000096766.12	chr17	+	5441	24	FSM	ENSMUSG00000032624.17	ENSMUST00000096766.12	5441	24	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_6	101.418055237548	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTTTCCTTTGCCTTT	NA	False	NA	12	True	GATAAA	-15	NA	83658359	83787786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUST00000096990.10	chr16	-	1747	18	FSM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	122.52143375795	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630376	18599202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18629138_18629232_18630054_18630115_18630264
ENSMUST00000097014.7	chr15	-	1803	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	0	0	0	0	multi-exon	FALSE	canonical	3	1268	junction_3	1593.04014038846	1135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTGTGTTCTATATT	NA	False	NA	-4	True	AATAAA	-19	NA	98851584	98847717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ENSMUST00000097029.4	chrX	+	847	1	FSM	ENSMUSG00000072249.4	ENSMUST00000097029.4	847	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCAAATTGATGCTTAAA	NA	False	NA	30	True	AATAAA	-30	NA	8929253	8930100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_8929300_8930100
ENSMUST00000097175.5	chr16	+	1948	7	FSM	ENSMUSG00000072419.6	ENSMUST00000097175.5	1948	7	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_4	51.0968579160098	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCAGCTCACTCGCCTG	NA	False	NA	NA	False	AATACA	-17	NA	48130839	48140086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ENSMUST00000097218.7	chr6	-	2353	1	FSM	ENSMUSG00000072476.7	ENSMUST00000097218.7	2353	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCACGAGGAAGTGGAAA	NA	False	NA	NA	False	NA	NA	NA	76474767	76472414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_76472400_76474800
ENSMUST00000097227.11	chr10	+	995	7	FSM	ENSMUSG00000075706.12	ENSMUST00000097227.11	995	7	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_1	2928.20988641335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	1204	False	NA	4	True	AATAAA	-14	NA	79889870	79892273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79890135_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUST00000097281.4	chr17	-	6388	36	FSM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_23	13.6878912673552	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCATACAGTACATTCT	NA	False	NA	NA	False	AATAAA	-24	NA	79142753	79060326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524_79141673_79142734
ENSMUST00000097299.10	chr17	+	1206	4	FSM	ENSMUSG00000044279.16	ENSMUST00000097299.10	1206	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	33.4099120355355	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTAGCTGTAAGCTCTT	1526	False	NA	NA	False	AATAAA	-31	NA	57369230	57372918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089
ENSMUST00000097311.9	chr17	-	3197	17	FSM	ENSMUSG00000023991.17	ENSMUST00000097311.9	3197	17	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	35.8812603422734	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235360	48178688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ENSMUST00000097317.10	chr17	-	1931	13	FSM	ENSMUSG00000023942.16	ENSMUST00000097317.10	1931	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	734.773547881704	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906829	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906803
ENSMUST00000097333.10	chr17	-	3593	17	FSM	ENSMUSG00000003534.18	ENSMUST00000097333.10	3593	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	12.0461352723602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGGTGTATTTCC	5616	False	NA	-2	True	AATAAA	-32	NA	36014933	35992461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36014815
ENSMUST00000097342.10	chr17	+	3934	26	FSM	ENSMUSG00000013787.16	ENSMUST00000097342.10	3934	26	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	74.3555135817109	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGTCTGGTGATT	7155	False	NA	12	True	AATAAA	-13	NA	35117929	35133020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUST00000097343.11	chr17	+	1607	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_1	144.013228559046	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGTTATTGTAACTGC	32	False	NA	NA	False	AAAAAG	-10	NA	35069366	35075345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUST00000097352.11	chr17	+	4252	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	23.0781281736626	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGATTCTGTAAAGCTT	NA	False	NA	29	True	ATTAAA	-22	NA	31783707	31826667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUST00000097393.11	chr17	+	2535	18	FSM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	62.8043041744542	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTGTCCCATTGCAT	NA	False	NA	NA	False	NA	NA	NA	15261469	15284112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ENSMUST00000097395.5	chr17	+	1684	12	FSM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	68.2306491805794	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTAGGTGGGACTTTT	NA	False	NA	NA	False	AGTAAA	-15	NA	15230437	15242711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176
ENSMUST00000097419.10	chr17	+	3505	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_7	116.477107908235	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGGTTTATCCTTGTGTT	NA	False	NA	NA	False	AGTAAA	-33	NA	8384332	8415636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ENSMUST00000097420.7	chr17	-	962	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	309	522	-3	-522	multi-exon	FALSE	canonical	0	0	junction_6	240.913852600883	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTTTGGCTTTTTC	NA	False	NA	-8	True	AAAAAG	-7	NA	8366620	8347429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ENSMUST00000097423.3	chr17	+	1527	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	342	320	0	0	multi-exon	TRUE	canonical	3	57	junction_4	7.41482244134913	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTTCATTTATTTAAC	NA	False	NA	NA	False	NA	NA	NA	8164826	8198336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
ENSMUST00000097432.10	chr17	-	4007	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGACAGCAAGGATGAAGT	2593	False	NA	NA	False	ACTAAA	-45	NA	6130016	6092470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ENSMUST00000097432.10-0	chr17	-	2137	17	FSM	ENSMUSG00000015659.13	ENSMUST00000097432.10	4007	17	0	1870	0	0	multi-exon	FALSE	canonical	3	56	junction_6	12.4296457612436	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCCATCTGTTGTTA	2593	False	NA	-19	True	AATATA	-15	NA	6130016	6094340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6111822_6111937_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
ENSMUST00000097442.9	chr1	+	4357	19	FSM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	7	6382	0	245	multi-exon	FALSE	canonical	3	10	junction_17	4.78713553878169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGACTGATCTGCAGTG	NA	False	NA	NA	False	AATATA	-21	NA	189460471	189602510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ENSMUST00000097443.10	chr1	+	2411	6	FSM	ENSMUSG00000039210.17	ENSMUST00000097443.10	2411	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	28.9924128005932	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTTCAATTCTCTG	NA	False	NA	NA	False	AATAAA	-43	NA	186947704	186968028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966828
ENSMUST00000097450.10	chr1	+	5160	36	FSM	ENSMUSG00000026490.19	ENSMUST00000097450.10	5160	36	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	13.9494714990225	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCGGTGACTGCA	NA	False	NA	NA	False	NA	NA	NA	179788674	179989731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ENSMUST00000097522.11	chr18	+	1540	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	35	3902	0	0	multi-exon	FALSE	canonical	0	0	junction_2	128.264050562372	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	False	NA	19	True	NA	NA	NA	77031822	77059101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUST00000097526.3	chr1	+	2589	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	41.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTGGCTTTTGTCTCTT	NA	False	NA	10	True	AATAAA	-19	NA	155916662	155929482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_155916749_155916820_155916881_155927039
ENSMUST00000097527.10	chr1	-	1599	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	468	2167	91	0	multi-exon	FALSE	canonical	3	47	junction_4	20.1935083078146	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAATTATCTGTGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	155911705	155882526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ENSMUST00000097529.5	chr1	+	1255	4	FSM	ENSMUSG00000033701.14	ENSMUST00000097529.5	1255	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	164.081280671095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCCGGAGATAAGTGTT	NA	False	NA	6	True	NA	NA	NA	155433871	155463544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155463185
ENSMUST00000097530.5	chr18	+	2833	15	FSM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	20.6853245819645	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCATAAGGTTGCCATG	NA	False	NA	NA	False	NA	NA	NA	74401245	74415803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ENSMUST00000097536.6	chr1	+	1737	3	FSM	ENSMUSG00000008475.14	ENSMUST00000097536.6	1737	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGTAACTCTCCAGTTA	NA	False	NA	100	True	AATAAA	-35	NA	152642292	152651348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_152642619_152644611_152644685_152650010
ENSMUST00000097542.4	chr18	-	3576	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	9.14800253679584	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTTGGATGTCTTGA	830	False	NA	-4	True	AATAAA	-18	NA	67774406	67750869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ENSMUST00000097543.8	chr1	+	3337	14	FSM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	362.778266997786	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	False	NA	10	True	ATTAAA	-14	NA	151220268	151240166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUST00000097547.10	chr1	-	2851	13	FSM	ENSMUSG00000006010.15	ENSMUST00000097547.10	2851	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	38.2014942988709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	951	False	NA	NA	False	AATAAA	-13	NA	150268513	150237063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ENSMUST00000097558.5	chr9	-	1534	14	FSM	ENSMUSG00000032126.17	ENSMUST00000097558.5	1534	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	247.72641905583	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGAGTCTGAGACCTT	3255	False	NA	-4	True	AATAAA	-20	NA	44253678	44247648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44253517
ENSMUST00000097561.9	chr1	+	1828	6	FSM	ENSMUSG00000026421.15	ENSMUST00000097561.9	1828	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	177.543684765187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTCCTGTCTGTCT	NA	False	NA	24	True	AATAAA	-17	NA	135647798	135679970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135647932_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUST00000097580.2	chr18	+	2169	4	FSM	ENSMUSG00000073568.3	ENSMUST00000097580.2	2169	4	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_2	15.9234278833282	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTGGGTTTTCAGGGT	2986	False	NA	16	True	AATAAA	-12	NA	47059048	47067289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47059157_47059378_47059483_47061585_47061726_47065472
ENSMUST00000097588.9	chr1	-	6784	23	FSM	ENSMUSG00000026425.16	ENSMUST00000097588.9	8026	23	0	1242	0	-1242	multi-exon	FALSE	canonical	3	89	junction_2	12.3013135091171	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGCTGTACGTCACCTCC	NA	False	NA	-9	True	AATAAA	-17	NA	131455085	131214230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ENSMUST00000097590.5	chr18	-	3980	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	0	0	0	0	multi-exon	FALSE	canonical	1	536	junction_20	328.950941881023	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTTTAATCTTTATAC	NA	False	NA	41	True	AATAAA	-17	NA	42395259	42335362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ENSMUST00000097597.7	chr1	-	1913	13	FSM	ENSMUSG00000036086.17	ENSMUST00000097597.7	1913	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	65.8438282773885	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATATGTGTGATTGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	128030784	127914846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_127915137_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128030704
ENSMUST00000097608.3	chr18	+	2831	1	FSM	ENSMUSG00000073590.4	ENSMUST00000097608.3	2831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGTATATTTTAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	37788959	37791790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_37789000_37791800
ENSMUST00000097622.4	chr18	+	4256	5	FSM	ENSMUSG00000034300.18	ENSMUST00000097622.4	4256	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	5.02493781056044	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCCATTTTCCCAAGC	5087	False	NA	4	True	AATAAA	-11	NA	34892608	34906791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650
ENSMUST00000097626.10	chr18	-	3005	21	FSM	ENSMUSG00000003778.15	ENSMUST00000097626.10	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_13	121.034540524596	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGTGTATATATAACA	NA	False	NA	-34	True	NA	NA	NA	34757654	34732911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUST00000097633.10	chr1	+	3232	10	FSM	ENSMUSG00000073609.10	ENSMUST00000097633.10	3232	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	12.154357040244	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTCCACACATTTAGT	NA	False	NA	NA	False	CATAAA	-27	NA	93752961	93780070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ENSMUST00000097642.4	chr1	-	438	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	1	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTGCTTTTAGATGCA	NA	False	NA	-19	True	AATAAA	-30	NA	92569707	92564866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_92565126_92567408_92567482_92569601
ENSMUST00000097643.10	chr18	+	5351	11	FSM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	9.53100204595508	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAATAATTTTTT	NA	False	NA	12	True	AATAAA	-21	NA	25302076	25600378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ENSMUST00000097644.9	chr1	-	8100	27	FSM	ENSMUSG00000026313.17	ENSMUST00000097644.9	8100	27	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_26	29.6698799314714	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTACCTCCTTGTGT	6554	False	NA	0	True	AATAAA	-23	NA	92108063	91856500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ENSMUST00000097646.5	chr18	+	1065	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	17.066048165876	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAATGGTAGTATTTAATT	359	False	NA	17	True	GATAAA	-14	NA	24603925	24610855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
ENSMUST00000097649.10	chr1	+	3645	8	FSM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	18.7823190848223	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	4	True	AATAAA	-18	NA	90981175	91045037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ENSMUST00000097658.2	chr18	-	2703	16	FSM	ENSMUSG00000033382.16	ENSMUST00000097658.2	2703	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	46.2449516764323	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTGTTCTATGGTCAT	NA	False	NA	-2	True	AATAAA	-28	NA	21029135	20979201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ENSMUST00000097670.10	chr18	-	2088	10	FSM	ENSMUSG00000024293.17	ENSMUST00000097670.10	2088	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	44.9611629391357	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTACTTGATACAAT	5	True	NA	-29	True	AATAAA	-33	NA	10610129	10566610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10596338_10596442_10610025
ENSMUST00000097672.4	chr1	+	901	4	FSM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.3536509852382	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTCTGGTTTGTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	84817561	84878208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_84817690_84858812_84858922_84874210_84874384_84877717
ENSMUST00000097682.4	chr18	+	411	1	FSM	ENSMUSG00000073640.4	ENSMUST00000097682.4	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	770	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATTTTTGTTTTGGTCA	33	False	NA	NA	False	NA	NA	NA	6332631	6333042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_6332600_6333000
ENSMUST00000097690.5	chr18	-	619	1	FSM	ENSMUSG00000073647.5	ENSMUST00000097690.5	619	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAATGACCACTGCTCA	396	False	NA	NA	False	AGTAAA	-17	NA	4198938	4198319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_4198300_4198900
ENSMUST00000097694.11	chr1	+	2561	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	8.45576726264388	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTGCCTGCTTGTC	NA	False	NA	15	True	AATAAA	-22	NA	75119429	75124557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ENSMUST00000097707.5	chr1	+	9501	42	FSM	ENSMUSG00000025949.17	ENSMUST00000097707.5	6641	42	-67	-2793	0	-1890	multi-exon	FALSE	canonical	3	51	junction_11	15.9367802178507	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGATCTCTTTGAGGA	NA	False	NA	30	True	AATAAA	-40	NA	65225841	65315964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
ENSMUST00000097709.11	chr1	-	2302	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_5	91.7393556495793	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATTATGTGTTTTTA	NA	False	NA	-6	True	ATTAAA	-28	NA	65218340	65197774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
ENSMUST00000097713.2	chr1	-	8562	8	FSM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	6.03391773769796	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCTCATATCAGCTTT	NA	False	NA	-5	True	AATAAA	-15	NA	64995983	64828279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995853
ENSMUST00000097713.2-0	chr1	-	3825	8	FSM	ENSMUSG00000051344.14	ENSMUST00000097713.2	8562	8	49	4688	0	0	multi-exon	FALSE	canonical	3	14	junction_5	6.03391773769796	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTATTAAGAAAATACCA	NA	False	NA	NA	False	ATTAAA	-38	NA	64995934	64832967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995853
ENSMUST00000097715.4	chr19	-	1398	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	27.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGACAGTGTAGGGTC	NA	False	NA	NA	False	NA	NA	NA	44994881	44993267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44994380_44994501_44994609_44994702
ENSMUST00000097715.4-0	chr19	-	783	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	22	593	0	390	multi-exon	FALSE	canonical	3	460	junction_1	27.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGAGTCTGGAGGCTGT	NA	False	NA	-2	True	AAAACA	-3	NA	44994859	44993860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44994380_44994501_44994609_44994702
ENSMUST00000097737.5	chr4	-	1243	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	43.9103911276089	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9080	False	NA	NA	False	AATAAA	-14	NA	155976238	155973318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ENSMUST00000097739.5	chr1	-	10583	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_18	5.36548800562088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTACTGGTTTTCAT	NA	False	NA	3	True	AATAAA	-29	NA	54596841	54512152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ENSMUST00000097739.5-1	chr1	-	8031	27	FSM	ENSMUSG00000073678.5	ENSMUST00000097739.5	10583	27	0	2552	0	-2552	multi-exon	FALSE	canonical	3	24	junction_18	5.36548800562088	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCCATACTCTGTTTT	NA	False	NA	-1	True	AATAAA	-18	NA	54596841	54514704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_54520004_54521010_54521116_54525628_54525817_54529379_54529431_54531187_54531324_54532367_54532566_54533959_54534051_54536692_54536787_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ENSMUST00000097747.9	chr4	+	1479	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	4.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334459	155341141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155335108_155335212_155335494_155340591
ENSMUST00000097773.4	chr4	+	3986	4	FSM	ENSMUSG00000073700.4	ENSMUST00000097773.4	3986	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	3.39934634239519	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGTGTCATGGCCTTC	6398	False	NA	13	True	AATAAA	-13	NA	152093259	152102137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791
ENSMUST00000097781.11	chr4	+	2816	25	FSM	ENSMUSG00000017264.17	ENSMUST00000097781.11	2816	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	122.740912483256	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAAAGATGGTTCTTGG	NA	False	NA	NA	False	ATTAAA	-14	NA	148642911	148666850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657487_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUST00000097820.9	chr4	-	4382	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_20	26.9722901858523	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376067	140241795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ENSMUST00000097822.10	chr4	+	15928	106	FSM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_69	97.5331440845179	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACCAGGAAGACTGCTG	NA	False	NA	80	True	NA	NA	NA	139107969	139216899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ENSMUST00000097826.6	chr1	+	2728	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGTGTGAATGTGTG	9939	False	NA	NA	False	AATAAA	-11	NA	9918621	9970078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUST00000097826.6-0	chr1	+	3720	17	FSM	ENSMUSG00000025915.15	ENSMUST00000097826.6	2728	17	0	-992	0	0	multi-exon	FALSE	canonical	3	32	junction_1	27.8654692226777	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGACTATTTCATGCT	9939	False	NA	NA	False	ATTAAA	-16	NA	9918621	9971070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9918774_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUST00000097830.4	chr4	-	1668	8	FSM	ENSMUSG00000041161.9	ENSMUST00000097830.4	1668	8	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_7	2.1380899352994	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTTTCTCTCTCATT	NA	False	NA	0	True	NA	NA	NA	138641256	138622689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138623226_138624026_138624209_138624867_138624965_138625317_138625450_138629162_138629286_138632467_138632581_138636792_138636942_138640920
ENSMUST00000097836.10	chr4	+	3113	12	FSM	ENSMUSG00000028759.14	ENSMUST00000097836.10	3113	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	20.9126479187884	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCAGTACCTGTCCT	4565	False	NA	42	True	AATAAA	-40	NA	137943937	137970481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUST00000097837.11	chr4	+	3168	23	FSM	ENSMUSG00000041351.17	ENSMUST00000097837.11	3168	23	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	40.603123480388	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	9950	False	NA	11	True	AATAAA	-21	NA	137434832	137457172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
ENSMUST00000097844.9	chr4	+	3055	6	FSM	ENSMUSG00000028676.18	ENSMUST00000097844.9	3055	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	618.505101029894	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4321	False	NA	NA	False	AATAAA	-17	NA	135583057	135593126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135583603_135585615_135585721_135589084_135589189_135590350_135590514_135590836_135590888_135591039
ENSMUST00000097856.10	chr4	-	2901	8	FSM	ENSMUSG00000028878.12	ENSMUST00000097856.10	1863	8	0	-1038	0	0	multi-exon	FALSE	canonical	3	35	junction_3	31.9367998345712	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTGATTCAGTTG	NA	False	NA	0	True	AATAAA	-19	NA	132649804	132626523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ENSMUST00000097862.3	chr4	+	5340	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097862.3	3991	22	-39	-1310	0	0	multi-exon	FALSE	canonical	3	304	junction_17	105.62885866236	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUST00000097864.9	chr4	+	5334	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	-19	-1298	0	0	multi-exon	FALSE	canonical	3	368	junction_8	95.9617506945964	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUST00000097873.10	chr4	-	5033	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	50.045534821356	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129132967	129113370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ENSMUST00000097874.9	chr4	+	1992	9	FSM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	45.8214946831724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	False	NA	16	True	AATAAA	-19	NA	128952606	128978319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ENSMUST00000097877.9	chr4	-	5364	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.69041575982343	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAACATTTTGTATTT	NA	False	NA	-6	True	NA	NA	NA	128503891	128477339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
ENSMUST00000097877.9-0	chr4	-	3472	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	64	1828	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.69041575982343	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGTCTTTACAAATGCTG	NA	False	NA	NA	False	AATACA	-16	NA	128503827	128479167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
ENSMUST00000097911.9	chr4	-	4550	22	FSM	ENSMUSG00000033326.16	ENSMUST00000097911.9	4550	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	19.1806071752168	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTGACTGTGGTCTGCC	NA	False	NA	-3	True	AATAAA	-14	NA	118036851	117994155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034761_118036798
ENSMUST00000097912.8	chr4	-	2143	11	FSM	ENSMUSG00000028538.13	ENSMUST00000097912.8	2143	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	21.8286508973871	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1894	False	NA	-7	True	AATAAA	-12	NA	117992079	117789356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
ENSMUST00000097915.4	chr4	-	1152	2	FSM	ENSMUSG00000073771.12	ENSMUST00000097915.4	1152	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAATATTTGTATTC	NA	False	NA	-24	True	NA	NA	NA	116979582	116977073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116978059_116979415
ENSMUST00000097921.10	chr4	-	2471	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTTTCCTGTGATTTT	6843	False	NA	NA	False	ATTAAA	-22	NA	109524386	109518072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_109518824_109522214_109522355_109522806
ENSMUST00000097925.9	chr4	+	5865	30	FSM	ENSMUSG00000034610.15	ENSMUST00000097925.9	5865	30	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_29	34.6155374652357	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATTCATCTGGTA	NA	False	NA	21	True	AATAAA	-21	NA	108317206	108416618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415914
ENSMUST00000097930.2	chr4	-	2991	2	FSM	ENSMUSG00000073779.8	ENSMUST00000097930.2	2991	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCCCTTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	107668145	107663229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_107666035_107667959
ENSMUST00000097957.11	chr7	-	1199	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	76.3392919799496	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGGCTGGAAGTA	NA	False	NA	-2	True	AGTAAA	-18	NA	140773918	140770838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ENSMUST00000097961.9	chr4	+	3079	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	55.2805922322746	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCGTGTATTTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	99603901	99651697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ENSMUST00000097974.9	chr7	-	1907	4	FSM	ENSMUSG00000041309.18	ENSMUST00000097974.9	1907	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	33.9803864996658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTCCGCAGGCGCCTT	NA	False	NA	-9	True	AATAAA	-20	NA	139162713	139159291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139159538_139160780_139161605_139161796_139161970_139162049
ENSMUST00000097981.6	chr4	-	1390	2	FSM	ENSMUSG00000073802.6	ENSMUST00000097981.6	1390	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGTTCAACTTGGTTT	NA	False	NA	NA	False	AAGAAA	-18	NA	89229276	89224535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_89225552_89228902
ENSMUST00000097992.10	chr4	+	5791	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_35	26.0666035463672	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTGACTTTTATTTT	NA	False	NA	10	True	AGTAAA	-19	NA	88012866	88329243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUST00000097998.9	chr7	-	4341	4	FSM	ENSMUSG00000030956.16	ENSMUST00000097998.9	4341	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	53.4852004452322	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	False	NA	-18	True	AATAAA	-13	NA	132415615	132313816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132317732_132373306_132373359_132380864_132381115_132415491
ENSMUST00000097999.9	chr7	-	5465	5	FSM	ENSMUSG00000030956.16	ENSMUST00000097999.9	5465	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	41.3430768085782	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCTGCGCATGGCTG	NA	False	NA	-12	True	AATAAA	-19	NA	132415257	132313810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132414794
ENSMUST00000098031.10	chr4	+	2072	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAAACAGGAGGCTAAGT	NA	False	NA	NA	False	NA	NA	NA	62501837	62575676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ENSMUST00000098031.10-0	chr4	+	4565	18	FSM	ENSMUSG00000059810.19	ENSMUST00000098031.10	2072	18	-92	-2401	-92	0	multi-exon	FALSE	canonical	3	19	junction_17	16.975863182644	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCGACTCCTGTCATCA	NA	False	NA	NA	False	NA	NA	NA	62501745	62578077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62575339
ENSMUST00000098036.9	chr7	-	1571	14	FSM	ENSMUSG00000030720.17	ENSMUST00000098036.9	1571	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	40.0146422904558	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTGTGCAGTCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	126182362	126171257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126180817_126180915_126181935_126182015_126182171
ENSMUST00000098048.6	chr7	+	1679	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_6	33.4490583749803	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCTTGTCTTGTGTCTT	NA	False	NA	0	True	AATAAA	-17	NA	126086532	126089899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ENSMUST00000098060.5	chr7	-	3102	19	FSM	ENSMUSG00000030766.16	ENSMUST00000098060.5	3102	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	64.8370226504336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969109	122878493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUST00000098068.10	chr7	-	3750	13	FSM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_9	28.0835806121655	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732169	121706484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ENSMUST00000098080.9	chr7	-	3072	3	FSM	ENSMUSG00000048787.14	ENSMUST00000098080.9	3072	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	56	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATATTTATACTCTT	NA	False	NA	-14	True	AATAAA	-9	NA	119494766	119455035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_119457280_119458602_119459139_119494474
ENSMUST00000098098.9	chr4	-	5061	11	FSM	ENSMUSG00000035696.16	ENSMUST00000098098.9	5061	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	20.7749849578766	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTGTTTCATGTAAGGCG	1659	False	NA	0	True	AATAAA	-26	NA	44167608	44126209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167317
ENSMUST00000098106.9	chr4	+	5325	12	FSM	ENSMUSG00000035969.16	ENSMUST00000098106.9	5325	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.6178830520698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	163	False	NA	17	True	AATAAA	-19	NA	43406434	43427088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43406681_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ENSMUST00000098109.9	chr4	-	4239	10	FSM	ENSMUSG00000028454.17	ENSMUST00000098109.9	4239	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_4	26.4280995238864	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	5675	False	NA	-7	True	AATAAA	-21	NA	43025756	43017634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ENSMUST00000098135.2	chr7	+	1472	1	FSM	ENSMUSG00000073894.2	ENSMUST00000098135.2	1472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTGCGTAGTAGTCT	NA	False	NA	20	True	NA	NA	NA	106808651	106810123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_106808700_106810100
ENSMUST00000098143.11	chr4	+	4594	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_17	193.960434840598	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTGTTTATTGAG	6045	False	NA	34	True	ATTAAA	-19	NA	40970905	41025993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ENSMUST00000098148.6	chr7	-	2216	7	FSM	ENSMUSG00000030888.15	ENSMUST00000098148.6	2216	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	101.739318303638	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTCCTGATTATTGG	9644	False	NA	NA	False	NA	NA	NA	105386592	105381610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105386271
ENSMUST00000098163.9	chr4	-	9941	8	FSM	ENSMUSG00000039967.15	ENSMUST00000098163.9	9941	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.816204962863	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATAATGTTTTGTTCAT	11	True	NA	5	True	AATAAA	-37	NA	34882930	34803112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826881_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ENSMUST00000098181.9	chr4	-	1445	7	FSM	ENSMUSG00000054659.14	ENSMUST00000098181.9	1445	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.71558280160133	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTAAGTGAGGACAGATA	-1	True	NA	NA	False	NA	NA	NA	33189433	33174229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_33174481_33174743_33174852_33179204_33179341_33181704_33181860_33183076_33183220_33187047_33187197_33188930
ENSMUST00000098190.10	chr4	+	5008	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	9.38823140367177	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGAAGTGGGGTCTCT	13	True	NA	4	True	AATAAA	-19	NA	32983036	33022180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ENSMUST00000098230.11	chr7	-	1269	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCTCCCTATGTG	6360	False	NA	-2	True	AATAAA	-18	NA	101899330	101888329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101889520_101899251
ENSMUST00000098242.4	chr4	+	1271	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	53	641	53	-641	multi-exon	FALSE	canonical	3	51	junction_6	14.9080515158756	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTCTGTGATTATTG	28	True	NA	NA	False	AATACA	-15	NA	20042104	20066109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ENSMUST00000098243.4	chr7	+	3693	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	25.1838738084513	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCCTTCCTGTCAGTT	NA	False	NA	NA	False	TATAAA	-14	NA	101043574	101061793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ENSMUST00000098244.2	chr4	+	3053	5	FSM	ENSMUSG00000073988.14	ENSMUST00000098244.2	3053	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	18.1934053986603	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTAAAATCTATTAAA	5	True	NA	NA	False	AGTAAA	-10	NA	20008427	20030785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ENSMUST00000098250.10	chr7	+	4316	20	FSM	ENSMUSG00000030691.16	ENSMUST00000098250.10	4316	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	7.64481610612047	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATGAAATTAAGT	NA	False	NA	-7	True	TATAAA	-10	NA	100757981	100933589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100758247_100759945_100760044_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
ENSMUST00000098252.5	chr7	+	3110	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	204.582800960832	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTTCACATTCTTTATT	NA	False	NA	11	True	AATAAA	-19	NA	100256896	100290475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUST00000098266.9	chr7	+	7132	16	FSM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	4.9486249493055	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTGTGTTTTCATTTC	NA	False	NA	16	True	ATTAAA	-21	NA	99184672	99255978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
ENSMUST00000098275.9	chr4	-	2822	4	FSM	ENSMUSG00000028207.19	ENSMUST00000098275.9	1007	4	76	-1891	0	367	multi-exon	FALSE	canonical	0	0	junction_1	212.653604614536	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGTCTAAAGCAAATGTA	4	True	NA	NA	False	AATAAA	-15	NA	9669086	9628655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9630953_9635900_9635970_9639197_9639348_9668780
ENSMUST00000098300.6	chr7	+	2039	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_8	19.8289560996034	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCACATTCACTTTCCT	NA	False	NA	63	True	NA	NA	NA	97020812	97041392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUST00000098305.4	chr7	-	3811	1	FSM	ENSMUSG00000074024.6	ENSMUST00000098305.4	3811	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92390676	92386865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92386900_92390700
ENSMUST00000098312.4	chr8	-	4598	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTAGAGAACTTTATT	NA	False	NA	-24	True	AATAAA	-21	NA	125624444	125619846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125619800_125624400
ENSMUST00000098320.6	chr8	+	2376	16	FSM	ENSMUSG00000031967.16	ENSMUST00000098320.6	4111	16	0	1735	0	566	multi-exon	FALSE	canonical	3	9	junction_13	180.225291109643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCTCAGATAAGACCATG	7495	False	NA	19	True	ATTAAA	-22	NA	124204641	124228920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124227971_124228173_124228253_124228449_124228586
ENSMUST00000098327.2	chr8	-	2380	3	FSM	ENSMUSG00000033594.12	ENSMUST00000098327.2	2380	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTGGAAAGGCTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	123962948	123958996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123960985_123962256_123962589_123962888
ENSMUST00000098331.10	chr7	-	3111	12	FSM	ENSMUSG00000025586.18	ENSMUST00000098331.10	3111	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.4250290487089	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	81104506	80996773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006641_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ENSMUST00000098333.5	chr8	-	7995	13	FSM	ENSMUSG00000035569.18	ENSMUST00000098333.5	7995	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	161.501010488755	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCGGAGGAAGGTCACAG	NA	False	NA	NA	False	NA	NA	NA	123642726	123610889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626544_123626717_123626923_123629071_123629080_123629162_123629187_123635406_123635546_123642639
ENSMUST00000098334.13	chr8	-	8455	13	FSM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_12	93.1657349386923	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGTTTTTAATTCCT	NA	False	NA	NA	False	NA	NA	NA	123768759	123610560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ENSMUST00000098334.13-0	chr8	-	9201	13	FSM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	-257	-489	0	489	multi-exon	FALSE	canonical	3	162	junction_12	93.1657349386923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTACATGGCACTGTCC	NA	False	NA	NA	False	NA	NA	NA	123769016	123610071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ENSMUST00000098340.7	chr9	+	3191	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCATCCTGTGGTCTG	NA	False	NA	16	True	GATAAA	-21	NA	110947202	111054736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUST00000098340.7-0	chr9	+	1745	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	0	1446	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.9842619904487	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	False	NA	46	True	AATGAA	-18	NA	110947202	111053290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUST00000098350.10	chr9	+	4227	23	FSM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	22.4939385774762	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGCTGAAGTTCTTGT	NA	False	NA	11	True	AATAAA	-23	NA	110162423	110214018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ENSMUST00000098361.4	chr8	+	1926	10	FSM	ENSMUSG00000024266.9	ENSMUST00000098361.4	1926	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	9.71571210608852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGCGTGTTGGGA	4281	False	NA	7	True	AATAAA	-12	NA	120339485	120343663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343147_120343269_120343352
ENSMUST00000098362.11	chr8	-	4336	24	FSM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_23	140.895341173728	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8149	False	NA	-7	True	AATAAA	-14	NA	120285466	120234894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285384
ENSMUST00000098363.10	chr8	+	1976	13	FSM	ENSMUSG00000031837.15	ENSMUST00000098363.10	1976	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	4.71625439894367	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTCTCTGTCCCTTT	NA	False	NA	11	True	AATAAA	-19	NA	120173457	120199379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120174004_120176820_120176846_120178820_120178930_120180939_120180966_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478_120198571_120198880
ENSMUST00000098367.5	chr8	+	2128	5	FSM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	28.3317401512862	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTGTGTACTTTTCTT	1469	False	NA	19	True	ATTAAA	-32	NA	120121616	120137841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120122210_120128219_120128333_120129172_120129330_120134294_120134445_120136726
ENSMUST00000098391.11	chr7	+	4207	21	FSM	ENSMUSG00000030513.15	ENSMUST00000098391.11	4207	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	34.1808060174128	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCAAAGGGGCTTGTAT	NA	False	NA	9	True	AATAAA	-14	NA	65511883	65700082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
ENSMUST00000098407.3	chr16	+	1998	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	4189	junction_2	31.1555238547945	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGTCTTCAGAATAAACAT	NA	False	NA	NA	False	NA	NA	NA	84571273	84607884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ENSMUST00000098414.5	chr7	-	3053	4	FSM	ENSMUSG00000074093.5	ENSMUST00000098414.5	3053	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	8.05536398239638	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGCAAGAGTTAGATGCA	NA	False	NA	-19	True	AATAAA	-17	NA	51655766	51646918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_51649526_51653093_51653208_51653682_51653734_51655485
ENSMUST00000098444.9	chr8	+	1273	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTGGTCCTTCTGTGTC	NA	False	NA	11	True	ATTAAA	-17	NA	106427785	106430125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106427950_106428805_106429029_106429239
ENSMUST00000098461.10	chr7	-	1227	8	FSM	ENSMUSG00000030798.16	ENSMUST00000098461.10	1227	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	15.6426940630769	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTGGTAAAAA	4419	False	NA	-13	True	AATAAA	-25	NA	44888264	44883055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44883403_44884107_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ENSMUST00000098473.11	chr8	-	8390	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_30	244.612610932232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTGAGCCACCATGTGG	NA	False	NA	NA	False	NA	NA	NA	96534090	96446078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUST00000098473.11-0	chr8	-	7687	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	-2	705	0	0	multi-exon	FALSE	canonical	3	674	junction_30	244.612610932232	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUST00000098500.5	chr9	+	3481	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCAGGTTATGAAGCT	NA	False	NA	NA	False	AATAAA	-30	NA	85724917	85729093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_85725009_85725703
ENSMUST00000098500.5-0	chr9	+	2432	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	0	1049	0	-1049	multi-exon	FALSE	canonical	3	125	junction_1	0	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGTTTAACTTTG	NA	False	NA	3	True	AATAAA	-16	NA	85724917	85728044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_85725009_85725703
ENSMUST00000098503.9	chr7	-	4995	4	FSM	ENSMUSG00000074158.10	ENSMUST00000098503.9	1976	4	-41	-2978	0	0	multi-exon	FALSE	canonical	3	68	junction_3	11.7284080571728	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATAATCTCTTCT	NA	False	NA	-23	True	NA	NA	NA	42292012	42258949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42263648_42265396_42265458_42265656_42265784_42291903
ENSMUST00000098509.5	chr7	-	3411	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	6.97614984548545	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTTTTTCTGTC	NA	False	NA	0	True	AATAAA	-21	NA	41149314	41128297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
ENSMUST00000098513.6	chr7	-	1562	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	0	3701	0	-3701	multi-exon	FALSE	canonical	3	140	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTGATTGTTAAGAGT	NA	False	NA	-20	True	NA	NA	NA	37927440	37920096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_37921583_37927364
ENSMUST00000098534.9	chr3	+	2339	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAACATGTGTTATGTG	NA	False	NA	NA	False	AATATA	-45	NA	145281986	145310550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUST00000098534.9-0	chr3	+	1657	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	0	682	0	0	multi-exon	FALSE	canonical	3	657	junction_9	57.8243402122986	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281986	145309868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUST00000098546.4	chr9	-	3136	4	FSM	ENSMUSG00000032358.13	ENSMUST00000098546.4	3136	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	0.816496580927726	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTTTTGTATCATGC	NA	False	NA	NA	False	AATATA	-44	NA	76453086	76397986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_76400368_76409390_76409516_76410299_76410465_76452621
ENSMUST00000098548.8	chr7	-	1573	6	FSM	ENSMUSG00000019194.16	ENSMUST00000098548.8	1573	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	3.38230690505755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTCTCTCATTAAC	NA	False	NA	-1	True	AATAAA	-16	NA	30826428	30815948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30816562_30816648_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
ENSMUST00000098559.3	chr7	+	470	6	FSM	ENSMUSG00000074199.8	ENSMUST00000098559.3	470	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	10.9105453575887	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTCTGTCCTTATC	NA	False	NA	23	True	AATAAA	-28	NA	30487329	30490522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30487448_30488929_30488969_30489137_30489180_30489336_30489382_30489992_30490041_30490344
ENSMUST00000098566.5	chr9	-	3225	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	0	-1032	0	0	multi-exon	FALSE	non_canonical	3	35	junction_5	10.1158577744251	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAAAATCAAGTTGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	72946981	72921945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ENSMUST00000098574.9	chr3	-	3669	15	FSM	ENSMUSG00000028149.13	ENSMUST00000098574.9	3669	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	10.7892614791424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTACTTGGTTTCTTTGT	NA	False	NA	-2	True	AATAAA	-25	NA	138780962	138631662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ENSMUST00000098576.10	chr9	+	4387	22	FSM	ENSMUSG00000038535.18	ENSMUST00000098576.10	4387	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_20	11.1161666503221	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTTGGCTAGCCT	NA	False	NA	20	True	AATAAA	-29	NA	72182160	72271059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ENSMUST00000098578.10	chr8	-	2119	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTGGAATTAAAATCT	NA	False	NA	NA	False	NA	NA	NA	84997009	84984423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ENSMUST00000098578.10-0	chr8	-	1612	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	0	507	0	0	multi-exon	FALSE	canonical	3	143	junction_9	31.8437543540021	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCCTTGTTTCTAAAC	NA	False	NA	-23	True	ATTAAA	-14	NA	84997009	84984930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ENSMUST00000098580.6	chr3	-	3072	20	FSM	ENSMUSG00000028158.15	ENSMUST00000098580.6	3072	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	5.34670530492644	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCGTGGGTTCCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	137849149	137796815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810550_137810703_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137839760_137839897_137844662_137844758_137848932
ENSMUST00000098594.4	chr7	+	393	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	139.802241279125	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTCCAGCCTGTGTGT	5674	False	NA	24	True	AATAAA	-25	NA	29883568	29885455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
ENSMUST00000098596.11	chr7	+	2117	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	7.82224392358101	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGAAAATGAAGGCTT	5259	False	NA	NA	False	NA	NA	NA	29821366	29834375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
ENSMUST00000098603.8	chr3	-	9179	11	FSM	ENSMUSG00000040943.13	ENSMUST00000098603.8	9179	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	56.8116185300155	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTCTGTTGCAGAGGT	NA	False	NA	-5	True	AATAAA	-24	NA	133250151	133169439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ENSMUST00000098604.12	chr7	-	1384	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	467	False	NA	-16	True	AATAAA	-21	NA	28981337	28955765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
ENSMUST00000098604.12-0	chr7	-	1127	7	FSM	ENSMUSG00000074227.13	ENSMUST00000098604.12	1384	7	257	0	255	0	multi-exon	FALSE	canonical	0	0	junction_2	452.801066204084	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	724	False	NA	-16	True	AATAAA	-21	NA	28981080	28955765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28963019_28963191_28980936
ENSMUST00000098613.9-1	chr9	-	2111	14	FSM	ENSMUSG00000032376.13	ENSMUST00000098613.9	2797	14	36	650	0	0	multi-exon	FALSE	canonical	3	10	junction_8	36.8152271043594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTCCAGAACTGCTCCA	NA	False	NA	-19	True	ATTAAA	-31	NA	66500282	66425158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ENSMUST00000098614.9	chr8	+	7581	15	FSM	ENSMUSG00000071064.16	ENSMUST00000098614.9	7581	15	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	2.87494454249973	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAAAGGTTGG	5046	False	NA	NA	False	AATATA	-9	NA	79755065	79920372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
ENSMUST00000098639.9	chr7	-	5158	4	FSM	ENSMUSG00000070709.13	ENSMUST00000098639.9	5158	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.12825877028341	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGTTATAAAACTT	NA	False	NA	NA	False	NA	NA	NA	27628855	27606816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27611687_27620121_27620221_27626825_27626879_27628719
ENSMUST00000098645.11	chr8	+	2004	4	FSM	ENSMUSG00000074247.11	ENSMUST00000098645.11	874	4	-6	-1124	0	0	multi-exon	FALSE	canonical	2	515	junction_3	146.765875537273	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	False	NA	13	True	NA	NA	NA	71921848	71928742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71921970_71924680_71924891_71926418_71926481_71927131
ENSMUST00000098651.6	chr9	-	5564	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGTTCTGTAAAATG	NA	False	NA	0	True	AATAAA	-17	NA	62888161	62785649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ENSMUST00000098651.6-0	chr9	-	3859	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	-4	1709	0	-1590	multi-exon	FALSE	canonical	3	79	junction_1	15.6049605221996	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGAAATAGTTATGT	NA	False	NA	-8	True	AATAAA	-22	NA	62888165	62787358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ENSMUST00000098668.3	chr7	-	3169	7	FSM	ENSMUSG00000074272.11	ENSMUST00000098668.3	1478	7	-69	-1622	0	0	multi-exon	FALSE	canonical	3	11	junction_6	8	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	2848	False	NA	-1	True	AATAAA	-21	NA	25177028	25161131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25163326_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25175768_25176129_25176895
ENSMUST00000098669.8	chr7	-	3709	9	FSM	ENSMUSG00000074272.11	ENSMUST00000098669.8	2873	9	-30	-806	0	0	multi-exon	FALSE	canonical	1	2	junction_6	10.3440804327886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	2848	False	NA	-1	True	AATAAA	-21	NA	25177028	25161131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25163326_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
ENSMUST00000098674.6	chr9	-	883	6	FSM	ENSMUSG00000074269.11	ENSMUST00000098674.6	883	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	244.73054570282	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAACAGGTGAATCCACT	9050	False	NA	17	True	AATAAA	-40	NA	58648842	58560138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58560390_58565039_58565127_58567456_58567655_58573115_58573200_58619298_58619389_58648669
ENSMUST00000098686.4	chr9	-	1969	8	FSM	ENSMUSG00000004661.16	ENSMUST00000098686.4	1969	8	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	15.8603600340019	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTTTTCTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	57744076	57701969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ENSMUST00000098750.5	chr3	+	3103	4	FSM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	11.8415464455544	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTATGGCTTTGTTT	NA	False	NA	28	True	AATAAA	-40	NA	106629251	106643890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_106629423_106638978_106640459_106641673_106641956_106642720
ENSMUST00000098751.10	chr3	+	1602	3	FSM	ENSMUSG00000056260.16	ENSMUST00000098751.10	929	3	0	-673	0	0	multi-exon	FALSE	canonical	3	7	junction_1	16.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-43	NA	106592302	106643893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_106592450_106641673_106641956_106642720
ENSMUST00000098754.5	chr7	-	2203	12	FSM	ENSMUSG00000002983.18	ENSMUST00000098754.5	2203	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	93.6601911430821	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGGGGGTCTTCTTT	NA	False	NA	-7	True	AATAAA	-14	NA	19363363	19340147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19356850_19356862_19361849_19361896_19363115
ENSMUST00000098763.7	chr3	-	4834	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	8.46167832052247	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTCTGGGGGAAAAGTC	1472	False	NA	-13	True	ATTAAA	-15	NA	104960267	104909232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
ENSMUST00000098780.10	chr7	-	2022	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	27.4902887640592	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2760	False	NA	-1	True	AATAAA	-18	NA	18644340	18624807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ENSMUST00000098789.5	chr7	+	6039	14	FSM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	35.8403758961691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGAGTCTAGTCTCAT	4778	False	NA	17	True	ATTAAA	-21	NA	16135131	16171620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16135232_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ENSMUST00000098796.10	chr8	+	14627	26	FSM	ENSMUSG00000070047.15	ENSMUST00000098796.10	14627	26	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	17.9599554565149	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTTTCTTCTGCAT	NA	False	NA	20	True	AATAAA	-27	NA	45403244	45505294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_45406519_45441967_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871_45471083_45475840_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45503817
ENSMUST00000098801.9	chr7	+	934	5	FSM	ENSMUSG00000074365.14	ENSMUST00000098801.9	934	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	373.339992500134	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	-11	True	AATAAA	-24	NA	15630048	15637945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_15630183_15631328_15631478_15632369_15632542_15636774_15636933_15637624
ENSMUST00000098814.13	chr7	+	3091	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	267.791767474326	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2620	False	NA	30	True	AATAAA	-18	NA	13012751	13045350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUST00000098817.4	chr8	+	6002	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGGTGTC	NA	False	NA	12	True	NA	NA	NA	40964823	41003798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ENSMUST00000098817.4-0	chr8	+	1768	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	20	4214	0	0	multi-exon	FALSE	canonical	3	191	junction_7	12.6869491086687	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTAGCTAATTTTTAA	NA	False	NA	13	True	ATTAAA	-13	NA	40964843	40999584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ENSMUST00000098822.10	chr7	+	4748	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	11.513277359447	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATGACCTTTTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	12212219	12230162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ENSMUST00000098845.10	chr7	+	2565	12	FSM	ENSMUSG00000035203.17	ENSMUST00000098845.10	2565	12	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	31.9772646507711	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1308	False	NA	21	True	AATAAA	-15	NA	5083233	5101177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5083477_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
ENSMUST00000098853.9	chr7	+	2189	9	FSM	ENSMUSG00000059851.16	ENSMUST00000098853.9	2189	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	214.33585648463	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	583	False	NA	16	True	ATTAAA	-17	NA	4743113	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4743181_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUST00000098859.10	chr7	-	912	8	FSM	ENSMUSG00000035458.16	ENSMUST00000098859.10	912	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	4.77664385637157	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGTGTGTCTGCTAAC	6917	False	NA	-2	True	AATAAA	-17	NA	4525527	4521303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525068_4525082_4525303
ENSMUST00000098862.9	chr17	-	796	4	FSM	ENSMUSG00000024121.14	ENSMUST00000098862.9	796	4	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_3	1244.06671846811	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTAGAGTGCTCCTGTGT	NA	False	NA	NA	False	NA	NA	NA	24388651	24383126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24383583_24383672_24383857_24388179_24388261_24388576
ENSMUST00000098864.5	chr8	+	432	1	FSM	ENSMUSG00000074412.5	ENSMUST00000098864.5	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTGACAATGAAAACACA	NA	False	NA	NA	False	AAGAAA	-19	NA	25944288	25944720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_25944300_25944700
ENSMUST00000098873.11	chr3	-	8272	8	FSM	ENSMUSG00000038766.17	ENSMUST00000098873.11	8272	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	7.38724769934165	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTCAGTATTGTT	NA	False	NA	-29	True	AATAAA	-11	NA	95116248	95089083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95116150
ENSMUST00000098896.5	chr8	+	377	2	FSM	ENSMUSG00000074442.5	ENSMUST00000098896.5	377	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGTGTTCACATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	21681629	21682565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_21681802_21682360
ENSMUST00000098916.3	chr8	+	2130	1	FSM	ENSMUSG00000074461.3	ENSMUST00000098916.3	2130	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGACTTGCCTTGGTCA	4307	False	NA	NA	False	NA	NA	NA	14140460	14142590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_14140500_14142600
ENSMUST00000098924.9	chr3	+	5909	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACTGTTACAAAGTTTTAT	NA	False	NA	12	True	AATAAA	-16	NA	89622328	89660753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUST00000098924.9-0	chr3	+	3869	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	0	2040	0	0	multi-exon	FALSE	canonical	3	79	junction_7	20.181320925195	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATATGTAGCACAGACA	NA	False	NA	20	True	ATTAAA	-20	NA	89622328	89658713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUST00000098937.10	chr9	-	1673	9	FSM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	44.5222907654132	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5896	False	NA	-9	True	AATAAA	-15	NA	21996723	21983541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996644
ENSMUST00000098942.6	chr9	-	1366	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	159.647071692531	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	False	NA	NA	False	NA	NA	NA	21671599	21666737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
ENSMUST00000098950.6	chr8	-	5743	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCCATTGTGTTCTT	NA	False	NA	NA	False	AATAAA	-33	NA	4375413	4335381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ENSMUST00000098950.6-1	chr8	-	2455	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	327	2961	0	0	multi-exon	FALSE	canonical	3	1349	junction_5	146.904594890698	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375086	4338342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ENSMUST00000098952.4	chr3	-	730	1	FSM	ENSMUSG00000074479.4	ENSMUST00000098952.4	730	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCACATGAGGATGTCAG	8827	False	NA	NA	False	NA	NA	NA	88484446	88483716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88483700_88484400
ENSMUST00000098956.3	chr3	-	471	4	FSM	ENSMUSG00000074486.3	ENSMUST00000098956.3	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	1.88561808316413	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	1172	False	NA	NA	False	AATAAA	-13	NA	88286006	88285042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88285310_88285515_88285574_88285716_88285750_88285893
ENSMUST00000098971.11	chr2	+	4307	33	FSM	ENSMUSG00000038685.19	ENSMUST00000098971.11	4307	33	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_30	51.0130095998805	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961531	180998409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997102_180997346_180997443_180997606_180997716
ENSMUST00000098979.11	chr9	-	7311	27	FSM	ENSMUSG00000046111.19	ENSMUST00000098979.12	7188	27	59	-182	59	0	multi-exon	TRUE	canonical	3	46	junction_7	32.7214575925683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGCTGTCCATCCA	9766	False	NA	0	True	AATAAA	-17	NA	15269025	15228210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ENSMUST00000098990.10	chr3	-	2799	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_6	7.88954358370519	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489841	84403399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ENSMUST00000098994.7	chr9	+	583	4	FSM	ENSMUSG00000048758.15	ENSMUST00000098994.7	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2179.51131117862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGATGACCAGTGTC	NA	False	NA	-57	True	NA	NA	NA	106306736	106308707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106306776_106307174_106307214_106307506_106307572_106308267
ENSMUST00000099007.3	chr2	-	3823	5	FSM	ENSMUSG00000074527.12	ENSMUST00000099007.3	3823	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	30.886890422961	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	NA	False	NA	NA	False	AATAAA	-25	NA	176619602	176605842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619484
ENSMUST00000099009.9	chr2	+	3823	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	24.8432586429397	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTGGGATAGAC	3035	False	NA	NA	False	AATAAA	-25	NA	175968361	175982121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ENSMUST00000099058.10	chr2	+	2985	7	FSM	ENSMUSG00000028640.12	ENSMUST00000099058.10	2985	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172392701	172400539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ENSMUST00000099071.5	chr2	+	1973	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTCTTAATTCTACT	NA	False	NA	NA	False	AAAAAG	-2	NA	168072541	168074514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_168072500_168074500
ENSMUST00000099072.11	chr2	-	722	8	FSM	ENSMUSG00000078919.11	ENSMUST00000099072.11	722	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	159.537469209063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCACATAAAAGAAATGAT	NA	False	NA	-40	True	AATGAA	-39	NA	168072248	168052461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUST00000099075.4	chr3	+	2461	3	FSM	ENSMUSG00000074579.15	ENSMUST00000099075.4	2461	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGTGTGTAATTATTG	NA	False	NA	NA	False	AATAAA	-14	NA	65573648	65593600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_65573733_65576510_65576600_65591312
ENSMUST00000099078.10	chr2	+	8770	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	19.7687636593819	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCCCAGTGTCATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	166647507	166739972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ENSMUST00000099078.10-0	chr2	+	5944	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	-53	2879	-53	-2879	multi-exon	TRUE	canonical	3	156	junction_4	19.7687636593819	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTAAGTGCGCGGTG	NA	False	NA	8	True	AATAAA	-20	NA	166647454	166737093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ENSMUST00000099080.9	chr2	-	5818	38	FSM	ENSMUSG00000039621.14	ENSMUST00000099080.9	5818	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_37	11.1368405936153	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAGGTCATTATTTCC	NA	False	NA	NA	False	ACTAAA	-30	NA	166480888	166408879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166480472
ENSMUST00000099090.7	chr3	+	4731	4	FSM	ENSMUSG00000027806.10	ENSMUST00000099090.7	9799	4	5	5063	0	0	multi-exon	FALSE	canonical	3	31	junction_2	37.7447568102732	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322140	58369141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_58325035_58335648_58335721_58366751_58366804_58367428
ENSMUST00000099118.8	chr6	-	1282	7	FSM	ENSMUSG00000048930.13	ENSMUST00000099118.8	1282	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	158.558786854872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354478	113343615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349526_113353852_113353907_113354276
ENSMUST00000099130.9	chr3	-	1070	5	FSM	ENSMUSG00000050174.16	ENSMUST00000099130.9	1070	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5804364508829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTAGCTCTAATCCT	NA	False	NA	-14	True	AATAAA	-15	NA	37473739	37459134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_37459641_37463656_37463712_37466508_37466565_37470849_37471054_37473490
ENSMUST00000099131.11	chr10	+	4562	29	FSM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_18	29.4428493449771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTCTTTTTCCTTT	2681	False	NA	-4	True	NA	NA	NA	128295176	128325991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUST00000099139.9	chr10	-	3302	14	FSM	ENSMUSG00000040043.18	ENSMUST00000099139.9	3302	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	100.648665396784	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCATAAGTACACCTCCA	NA	False	NA	NA	False	NA	NA	NA	128016166	127967426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128015661_128015715_128015817
ENSMUST00000099145.6	chr2	+	3402	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCTCATGGTGTTATT	NA	False	NA	7	True	NA	NA	NA	156563411	156606283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUST00000099145.6-0	chr2	+	2440	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	-446	1408	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.628309796089	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGCGTTTCTCACCC	NA	False	NA	11	True	ATTAAA	-14	NA	156562965	156604875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUST00000099151.6	chr3	+	2057	1	FSM	ENSMUSG00000074637.8	ENSMUST00000099151.6	2057	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3687	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCCTGAGTCTTTCATT	4607	False	NA	19	True	AATAAA	-24	NA	34704553	34706610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_34704600_34706600
ENSMUST00000099153.10-1	chr3	+	4516	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	359	4786	0	130	multi-exon	FALSE	canonical	3	147	junction_6	17.9285275124711	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTTTGTGAACACTTG	NA	False	NA	55	True	GATAAA	-29	NA	33854339	33864223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ENSMUST00000099157.4	chr10	-	2311	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	16.4851448279959	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCCCCCTTCCCCT	NA	False	NA	-2	True	AATAAA	-20	NA	127502501	127496787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ENSMUST00000099166.10	chr13	-	3012	22	FSM	ENSMUSG00000021758.15	ENSMUST00000099166.10	3012	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	9.06389513461723	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCCAACAGCATTTT	NA	False	NA	-1	True	AATAAA	-22	NA	112789009	112734868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_112735566_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112762855_112762958_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
ENSMUST00000099172.5	chr10	-	6295	29	FSM	ENSMUSG00000074657.6	ENSMUST00000099172.5	6295	29	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	8.75808664222118	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTTGCTTCTTATT	NA	False	NA	0	True	AATAAA	-16	NA	127099217	127061564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ENSMUST00000099173.11	chr2	-	2542	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	0	0	0	0	multi-exon	FALSE	canonical	3	11792	junction_7	843.012372017754	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATTGCTTTTGTGTGTT	3632	False	NA	-8	True	AATAAA	-32	NA	154734855	154713329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUST00000099194.4	chr2	-	3072	1	FSM	ENSMUSG00000074671.7	ENSMUST00000099194.4	3072	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGTCATATTATTTCCT	NA	False	NA	NA	False	AATAAA	-27	NA	153067361	153064289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_153064300_153067400
ENSMUST00000099195.10	chr3	-	6298	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGTCTACCTGTCAG	NA	False	NA	NA	False	TATAAA	-23	NA	19365486	19277271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ENSMUST00000099195.10-0	chr3	-	3351	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	0	2947	0	1330	multi-exon	FALSE	canonical	0	0	junction_2	44.9311201235353	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCTTTGCTCATTGGTT	NA	False	NA	-20	True	AATAAA	-2	NA	19365486	19280218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ENSMUST00000099207.5	chr2	-	3073	1	FSM	ENSMUSG00000074682.5	ENSMUST00000099207.5	3073	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	152256947	152253874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152253900_152256900
ENSMUST00000099223.11	chr3	-	2168	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	15	329	0	0	multi-exon	FALSE	canonical	3	23	junction_1	44.7837396086273	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGAGTTTCTTTAGT	NA	False	NA	1	True	ATTAAA	-20	NA	10505147	10483205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ENSMUST00000099224.10	chr2	+	4206	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_1	32.1674222709181	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCATGCAGCCTGAGCAA	NA	False	NA	19	True	AATAAA	-20	NA	152068758	152123772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUST00000099262.10	chr13	-	5352	20	FSM	ENSMUSG00000049658.14	ENSMUST00000099262.10	5352	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	12.8931255706523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTTTGTCCTTTTCA	9398	False	NA	-2	True	AATAAA	-16	NA	100192721	100154503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100156919_100160107_100160364_100161904_100162164_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186367_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666
ENSMUST00000099265.3	chr4	+	2140	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCACTGTCTTGTGTGT	NA	False	NA	8	True	NA	NA	NA	155778798	155780938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155778800_155780900
ENSMUST00000099272.3	chr5	+	1067	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	5077.72757835629	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146770011	146772796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUST00000099274.4	chr19	-	5982	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATATCTTCATTTGAT	NA	False	NA	-33	True	AATAAA	-16	NA	59334212	59285609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ENSMUST00000099274.4-0	chr19	-	4654	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	0	1328	0	-1328	multi-exon	FALSE	canonical	3	114	junction_1	13.8021737418423	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATCTGGTGTCTTGTGGCC	NA	False	NA	-2	True	NA	NA	NA	59334212	59286937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ENSMUST00000099276.4	chr10	-	3566	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGACTCATCTTCTTA	NA	False	NA	NA	False	AATAAA	-44	NA	112764900	112761334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_112761300_112764900
ENSMUST00000099278.9	chr2	+	2183	14	FSM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	16.1728825562271	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCACTGTAATTAGGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	146697783	146812017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
ENSMUST00000099294.9	chr19	-	6232	22	FSM	ENSMUSG00000025085.17	ENSMUST00000099294.9	6232	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.9649679466807	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	57186063	57021705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_57025770_57027838_57027920_57028918_57028994_57029846_57029855_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57185730
ENSMUST00000099295.6	chr13	+	5183	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTCTCTGTACTGGAAA	NA	False	NA	NA	False	NA	NA	NA	96524801	96554245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ENSMUST00000099295.6-0	chr13	+	2300	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	0	2883	0	-2332	multi-exon	FALSE	canonical	3	109	junction_9	14.0798812337163	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGTTCTAAGCATGTAC	NA	False	NA	NA	False	ATTAAA	-14	NA	96524801	96551362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ENSMUST00000099311.9	chr2	+	5089	8	FSM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	4.68170560233541	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTGTGCAATTT	NA	False	NA	15	True	AATAAA	-23	NA	136734087	136913870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ENSMUST00000099329.5	chr10	+	3867	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	0	0	0	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATGATTTGACTGGTC	NA	False	NA	13	True	AATAAA	-17	NA	95351006	95381519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ENSMUST00000099329.5-0	chr10	+	1216	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	0	2651	0	0	multi-exon	FALSE	canonical	3	1883	junction_3	164.877732476726	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCTTTGTACAGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	95351006	95378868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ENSMUST00000099337.5	chr10	-	6110	31	FSM	ENSMUSG00000074785.6	ENSMUST00000099337.5	7302	31	-167	1359	-167	-1359	multi-exon	TRUE	canonical	0	0	junction_5	2.01218510303821	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTGTTGTTCACATTG	NA	False	NA	-2	True	AATAAA	-20	NA	94780864	94628086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032_94663180_94667204_94667404_94669149_94669275_94669509_94669549_94673363_94673468_94673779_94673882_94677326_94677430_94679584_94679771_94680043_94680248_94683376_94683477_94685683_94685864_94688450_94688591_94700578_94700675_94700792_94700896_94702772_94702861_94706836_94706982_94718379_94718495_94742326_94742428_94746397_94746533_94758491_94758633_94779378
ENSMUST00000099355.12	chr10	-	3313	7	FSM	ENSMUSG00000019961.18	ENSMUST00000099355.12	1953	7	-26	-1334	0	0	multi-exon	FALSE	canonical	1	5	junction_3	305.633086123432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007440	90983432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUST00000099356.10	chr13	+	4101	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	15.8461995701281	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGCAGTTTATTTGA	NA	False	NA	30	True	AATAAA	-30	NA	81031528	81044161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ENSMUST00000099358.5	chr13	+	3671	9	FSM	ENSMUSG00000064138.15	ENSMUST00000099358.5	2242	9	25	-1454	0	0	multi-exon	FALSE	canonical	1	4	junction_4	35.0408244052562	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAACTGTGTCTTCTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	77856837	78314354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ENSMUST00000099362.11	chr2	-	3196	21	FSM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	21.856063231973	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539439	130526032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ENSMUST00000099371.5	chr13	+	276	1	FSM	ENSMUSG00000074800.5	ENSMUST00000099371.5	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCCCTGCTGTCTGAG	3163	False	NA	NA	False	NA	NA	NA	75793014	75793290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_75793000_75793300
ENSMUST00000099373.12	chr19	+	3045	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	9	1901	0	-71	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTTTTATCGTTTCTTT	NA	False	NA	13	True	AATAGA	-19	NA	46750043	46866730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ENSMUST00000099373.12-1	chr19	+	3137	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	205	1613	196	0	multi-exon	FALSE	canonical	0	0	junction_3	39.1240830889495	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGCCAAGTCTGTCG	NA	False	NA	13	True	AAGAAA	-15	NA	46750239	46867018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ENSMUST00000099374.9	chr10	-	3279	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	13	3456	0	180	multi-exon	FALSE	canonical	3	18	junction_8	13.3450365304858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGGTTTTAATGATCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	89279816	89248140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ENSMUST00000099376.11	chr19	+	3911	5	FSM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	18.7666592658363	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAATCTCCTGCCGCTC	NA	False	NA	17	True	AATAAA	-18	NA	46587552	46645821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ENSMUST00000099384.4	chr13	+	2407	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	21.3306248280625	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	False	NA	29	True	AATAAA	-26	NA	74085956	74109014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUST00000099393.4	chr19	+	2666	1	FSM	ENSMUSG00000074811.4	ENSMUST00000099393.4	2666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCGTGTTAAGTTTTG	NA	False	NA	25	True	AATATA	-14	NA	45991946	45994612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45991900_45994600
ENSMUST00000099396.3	chr10	+	5952	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	8.52632540148867	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTTAGACCTATCG	NA	False	NA	12	True	AATAAA	-22	NA	86614868	86674253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ENSMUST00000099400.3	chr5	-	4239	1	FSM	ENSMUSG00000074817.3	ENSMUST00000099400.3	4239	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGCCAGATGTTTAAGT	NA	False	NA	NA	False	AATAAA	-30	NA	142515831	142511592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_142511600_142515800
ENSMUST00000099414.5	chr17	+	5788	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTGTTGTGGTTT	NA	False	NA	16	True	ATTAAA	-18	NA	33508517	33526215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ENSMUST00000099414.5-0	chr17	+	3204	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	0	2584	0	490	multi-exon	FALSE	canonical	3	48	junction_3	21.7613316585993	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACATAAAATATAGTCG	NA	False	NA	-6	True	AATAAA	-13	NA	33508517	33523631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ENSMUST00000099431.6	chr14	-	468	1	FSM	ENSMUSG00000063556.6	ENSMUST00000099431.6	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAGTCCAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	77489754	77489286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_77489300_77489800
ENSMUST00000099441.6	chr13	-	2303	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTATGGTTTTTGGTT	NA	False	NA	-1	True	NA	NA	NA	64277169	64244121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
ENSMUST00000099441.6-0	chr13	-	1451	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	19	833	0	0	multi-exon	FALSE	canonical	3	80	junction_8	14.1169846708972	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTGTGATATTACAGT	NA	False	NA	NA	False	AATAAA	-19	NA	64277150	64244954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
ENSMUST00000099443.11	chr19	+	2573	12	FSM	ENSMUSG00000018820.14	ENSMUST00000099443.11	2573	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	33.3877792261314	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159032	42180156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ENSMUST00000099444.10	chr13	-	2288	14	FSM	ENSMUSG00000021461.18	ENSMUST00000099444.10	2288	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	30.2197082916227	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579508	63459948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63579263
ENSMUST00000099446.5	chr13	-	1332	4	FSM	ENSMUSG00000112964.2	ENSMUST00000099446.5	1332	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	8.04155872120988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAGAATGCAATCAATGT	6499	False	NA	NA	False	NA	NA	NA	74610808	74582899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74583936_74585699_74585761_74585978_74586106_74610700
ENSMUST00000099449.4	chr13	+	2571	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	97.7422915403335	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAGAATCCACA	NA	False	NA	NA	False	NA	NA	NA	62277729	62321233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
ENSMUST00000099475.12	chr2	+	525	3	FSM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	2874	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGAGCGCCTGGTTTG	NA	False	NA	-3	True	ATTAAA	-14	NA	121279863	121281535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121279923_121280455_121280565_121281178
ENSMUST00000099482.5	chr13	+	2169	16	FSM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_15	75.6883669323687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGGATTGCTGTGGGA	116	False	NA	NA	False	NA	NA	NA	55593273	55607589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ENSMUST00000099482.5-0	chr13	+	3443	16	FSM	ENSMUSG00000074886.12	ENSMUST00000099482.5	2169	16	-123	-1151	0	0	multi-exon	FALSE	canonical	3	190	junction_15	75.6883669323687	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
ENSMUST00000099484.9	chr5	+	451	3	FSM	ENSMUSG00000066613.15	ENSMUST00000099484.9	451	3	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	18.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCCAGGTGTCTGATT	8371	False	NA	NA	False	NA	NA	NA	110144387	110155333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110144500_110154809_110154937_110155121
ENSMUST00000099486.3	chr2	-	2047	2	FSM	ENSMUSG00000074890.5	ENSMUST00000099486.3	2047	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120970859	120958787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120959082_120969106
ENSMUST00000099489.9	chr2	+	1632	10	FSM	ENSMUSG00000023572.17	ENSMUST00000099489.9	1632	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	15.8464857653396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTCCTCTGAAGT	NA	False	NA	21	True	AATAAA	-30	NA	120838928	120847385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUST00000099494.4	chr19	+	7204	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_9	14.2774858907343	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTCTGTGCAATTGTGT	NA	False	NA	9	True	AATAAA	-11	NA	36903478	36990152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ENSMUST00000099496.4	chr13	-	1678	13	FSM	ENSMUSG00000025878.17	ENSMUST00000099496.4	1678	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	37.4398591818339	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATCTTATTTCAATAG	NA	False	NA	NA	False	AATATA	-12	NA	55248113	55176107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUST00000099501.10	chr10	+	3948	23	FSM	ENSMUSG00000035697.15	ENSMUST00000099501.10	3948	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	23.4611072568839	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGATCTTGTTCTTTTGC	NA	False	NA	16	True	AATAAA	-21	NA	79852486	79867306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79852753_79853613_79853939_79856523_79856668_79856784_79856870_79856955_79857029_79857222_79857290_79857379_79857518_79857628_79857694_79857910_79858022_79858108_79858190_79860496_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862569_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUST00000099512.3	chr16	-	4833	10	FSM	ENSMUSG00000040820.17	ENSMUST00000099512.3	4833	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.16397779494322	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTTTTTTATTTTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	94088715	93930164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650
ENSMUST00000099513.8	chr10	+	3195	8	FSM	ENSMUSG00000020331.10	ENSMUST00000099513.8	3195	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	3.18157963590287	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGCGCAGCGTCTCATT	NA	False	NA	24	True	AATAAA	-14	NA	79552467	79571942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79553054_79560221_79560646_79561980_79562143_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
ENSMUST00000099514.10	chr19	-	3665	10	FSM	ENSMUSG00000040451.19	ENSMUST00000099514.10	3665	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	73.0506335477551	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTATTATATTGTGTT	8331	False	NA	-1	True	AATAAA	-18	NA	32365912	32100126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32266940_32267032_32329344_32329424_32365619
ENSMUST00000099525.5	chr19	-	4575	1	FSM	ENSMUSG00000074909.6	ENSMUST00000099525.5	4575	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTCCTTCTACTGTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	29790374	29785799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29785800_29790400
ENSMUST00000099529.9	chr2	-	4813	26	FSM	ENSMUSG00000034032.16	ENSMUST00000099529.9	4813	26	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_25	84.4691091464803	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACTGTTTTGTCACAT	473	False	NA	-1	True	AATAAA	-21	NA	119618009	119594439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617895
ENSMUST00000099538.6	chr10	+	1874	4	FSM	ENSMUSG00000020265.17	ENSMUST00000099538.6	1874	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	598.245397437837	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	25	True	AGTAAA	-18	NA	77442404	77453256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77442803_77445645_77445775_77449813_77449886_77451981
ENSMUST00000099542.9	chr2	+	6525	24	FSM	ENSMUSG00000027326.14	ENSMUST00000099542.9	6525	24	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	14.4274470622304	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATCCATTTACC	7211	False	NA	NA	False	NA	NA	NA	118877599	118934602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ENSMUST00000099546.6	chr2	+	2090	1	FSM	ENSMUSG00000074916.6	ENSMUST00000099546.6	2090	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAACTCTGTAATTCCC	9712	False	NA	8	True	AATAAA	-19	NA	118756976	118759066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118757000_118759100
ENSMUST00000099547.4	chr13	+	3664	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	10.8972473588517	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAACAGTGTTGTCTG	NA	False	NA	7	True	AATAAA	-7	NA	46822997	46831532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ENSMUST00000099554.5	chr16	-	1333	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	13.865424623862	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGGTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-25	NA	90524292	90516199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
ENSMUST00000099556.2	chr19	-	855	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTCATCTTGAATCCCC	NA	False	NA	NA	False	NA	NA	NA	24454720	24453865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24453900_24454700
ENSMUST00000099558.5	chr19	-	4591	23	FSM	ENSMUSG00000024812.12	ENSMUST00000099558.5	4591	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	84.2977309185516	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTTTTAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	24202390	24071886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24202214
ENSMUST00000099646.10	chr16	-	1554	9	FSM	ENSMUSG00000022722.19	ENSMUST00000099646.10	1554	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.8525361601772	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACTAGAGTGTTCTG	NA	False	NA	NA	False	AATAAA	-10	NA	59459754	59433690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_59434208_59439028_59439042_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUST00000099689.5	chr2	-	1386	1	FSM	ENSMUSG00000087006.4	ENSMUST00000099689.5	1386	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCACTTCTCCGGGCTTT	NA	False	NA	-9	True	AATAAA	-17	NA	93787546	93786160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93786200_93787500
ENSMUST00000099690.4	chr2	-	2224	15	FSM	ENSMUSG00000075023.12	ENSMUST00000099690.4	2224	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	17.5243271145093	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGGCCTGCTTTATTTC	NA	False	NA	0	True	AATAAA	-23	NA	93699502	93685705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93699366
ENSMUST00000099691.11	chr10	-	4278	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_15	35.8424078528779	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGTTCAGACAAGGG	NA	False	NA	NA	False	AATAAA	-19	NA	62176321	62104633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ENSMUST00000099706.9	chr10	+	3086	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	25.5706741209535	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGACGCTGGAGCTTT	NA	False	NA	2	True	AATAAA	-13	NA	61551101	61574426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ENSMUST00000099709.10	chr2	-	3512	31	FSM	ENSMUSG00000040479.13	ENSMUST00000099709.10	3512	31	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_30	51.2884652399218	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91806209	91763168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91805911
ENSMUST00000099712.10	chr2	+	5021	19	FSM	ENSMUSG00000040506.17	ENSMUST00000099712.10	5021	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	21.1640418320005	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560478	91749194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUST00000099714.10	chr2	-	3469	5	FSM	ENSMUSG00000075040.10	ENSMUST00000099714.10	3469	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	8.1967981553775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGGCCACTTGCAT	NA	False	NA	NA	False	NA	NA	NA	91480124	91474013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480048
ENSMUST00000099716.11	chr2	+	6574	43	FSM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_4	59.822550333003	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCATTTCCCAAAATGC	NA	False	NA	9	True	AATAAA	-14	NA	91376666	91451007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUST00000099720.3	chr13	+	2182	3	FSM	ENSMUSG00000036721.15	ENSMUST00000099720.3	2182	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCTGTATACTGTCCTT	NA	False	NA	8	True	CATAAA	-13	NA	21547454	21553994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21548222_21550784_21550927_21552721
ENSMUST00000099736.4	chr13	-	853	1	FSM	ENSMUSG00000075053.4	ENSMUST00000099736.4	853	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTTTGAGTAGAGTATC	NA	False	NA	NA	False	NA	NA	NA	18206178	18205325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_18205300_18206200
ENSMUST00000099739.5	chr10	-	4111	33	FSM	ENSMUSG00000038122.10	ENSMUST00000099739.5	7240	33	0	3129	0	-3129	multi-exon	TRUE	non_canonical	1	5	junction_4	4.26639759486853	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTGGAACGAAGTGAG	NA	False	NA	NA	False	AATATA	-20	NA	56104785	55893517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ENSMUST00000099747.5	chr13	+	3892	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_5	19.409889274617	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTTTTCCTATTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	14129053	14173659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ENSMUST00000099820.10	chr13	-	2736	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099820.10	2736	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.4152725712726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAATGAATACTCTC	NA	False	NA	-20	True	ATTAAA	-11	NA	12476384	12454304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
ENSMUST00000099856.6	chr13	-	8294	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTATGATGACTTTATA	5961	False	NA	0	True	AATAAA	-26	NA	12272981	12197597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ENSMUST00000099856.6-0	chr13	-	4552	33	FSM	ENSMUSG00000021311.10	ENSMUST00000099856.6	8294	33	-84	3826	-66	0	multi-exon	FALSE	canonical	3	145	junction_5	17.0824917221552	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTGAATACAAGGAGAA	5877	False	NA	46	True	ATTAAA	-15	NA	12273065	12201423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
ENSMUST00000099858.4	chr10	+	2733	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	0	8200	0	-8200	multi-exon	FALSE	canonical	3	732	junction_5	67.3298687395854	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	34	True	AATAAA	-19	NA	44943298	45035094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUST00000099931.11	chr10	+	3809	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	18.7662686623146	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	-8	True	NA	8	True	AATAAA	-15	NA	41685930	41784420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ENSMUST00000099934.11	chr10	+	3292	23	FSM	ENSMUSG00000019823.18	ENSMUST00000099934.11	3292	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.6000926775296	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTATGCTCTGTGCTGG	9147	False	NA	31	True	AATAAA	-20	NA	41352363	41363028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41352537_41354005_41354311_41354969_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUST00000099945.6	chr10	-	3204	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTTTTCTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-29	NA	40178182	40163453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUST00000099946.6	chr13	-	3293	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	35	543	0	129	multi-exon	FALSE	canonical	3	47	junction_9	50.6888353061239	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTCTCCTGGTGGTTA	NA	False	NA	-1	True	ATTAAA	-29	NA	3943543	3932560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
ENSMUST00000099947.3	chr2	+	2493	1	FSM	ENSMUSG00000079247.3	ENSMUST00000099947.3	2493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGAAGCAAAGAAGCC	8046	False	NA	NA	False	NA	NA	NA	83820896	83823389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83820900_83823400
ENSMUST00000099948.3	chr2	+	2493	1	FSM	ENSMUSG00000095824.2	ENSMUST00000099948.3	2493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGAAGCAAAGAAGCC	2236	False	NA	NA	False	NA	NA	NA	83815086	83817579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83815100_83817600
ENSMUST00000099951.3	chr2	+	2493	1	FSM	ENSMUSG00000096729.2	ENSMUST00000099951.3	2493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGAAGCAAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	83797656	83800149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83797700_83800100
ENSMUST00000099955.4	chr19	-	1197	2	FSM	ENSMUSG00000024939.7	ENSMUST00000099955.4	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5779679	5778114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5778897_5779264
ENSMUST00000099967.10	chr10	+	3528	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTGTTTAT	NA	False	NA	NA	False	ATTAAA	-21	NA	39245793	39441368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUST00000099967.10-0	chr10	+	2613	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	-34	949	0	0	multi-exon	FALSE	canonical	3	82	junction_9	15.9414609592343	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39245759	39440419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUST00000099973.4	chr10	-	761	7	FSM	ENSMUSG00000039480.15	ENSMUST00000099973.4	761	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	35.3714417134627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGCTTCGTAATAC	NA	False	NA	NA	False	AATAAA	-15	NA	34294477	34273063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_34273238_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUST00000099985.6	chr10	-	1532	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	0	0	0	0	multi-exon	FALSE	canonical	3	2101	junction_1	71	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAGTGATTGTACTACA	NA	False	NA	NA	False	NA	NA	NA	30076556	30072004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_30073223_30074461_30074576_30076356
ENSMUST00000099985.6-0	chr10	-	375	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	68	1089	0	-1089	multi-exon	FALSE	canonical	3	2101	junction_1	71	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAATGGCTTCTGAGT	NA	False	NA	-7	True	ATTAAA	-22	NA	30076488	30073093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_30073223_30074461_30074576_30076356
ENSMUST00000099991.11	chr16	-	2548	3	FSM	ENSMUSG00000052384.15	ENSMUST00000099991.11	2548	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTTGTGTAATGTCCT	NA	False	NA	NA	False	AATAAA	-33	NA	31984403	31961602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31963824_31966370_31966492_31984197
ENSMUST00000099996.5	chr2	-	2737	1	FSM	ENSMUSG00000075273.5	ENSMUST00000099996.5	2737	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCGGTGTTTAGCGCC	NA	False	NA	NA	False	NA	NA	NA	75768929	75766192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_75766200_75768900
ENSMUST00000100009.11	chr2	-	3936	11	FSM	ENSMUSG00000027104.19	ENSMUST00000100009.11	3936	11	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	34.1648942629712	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGTTTATAATTTGC	NA	False	NA	-14	True	AATAAA	-11	NA	73693634	73646867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512
ENSMUST00000100012.3	chr10	-	2321	2	FSM	ENSMUSG00000039166.17	ENSMUST00000100012.3	2321	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25076056	25044987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_25047147_25075894
ENSMUST00000100013.9	chr16	-	7310	34	FSM	ENSMUSG00000022533.15	ENSMUST00000100013.9	7310	34	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	36.4499984569475	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207348	30131240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30162707_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ENSMUST00000100015.6	chr2	-	905	8	FSM	ENSMUSG00000027108.16	ENSMUST00000100015.6	905	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	132.211333609089	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGTGTTTTGTTCAATG	NA	False	NA	-1	True	AATAAA	-19	NA	73044677	72967870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_72968000_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUST00000100023.3	chr16	-	3055	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTGTCATTATTACTT	4797	False	NA	0	True	AATAAA	-24	NA	28748425	28644927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_28647762_28748204
ENSMUST00000100026.10	chr16	+	7089	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	12.5415310070182	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCCTACTGTTTTCAT	NA	False	NA	13	True	AATAAA	-22	NA	27207618	27270968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ENSMUST00000100036.10	chr10	+	2476	12	FSM	ENSMUSG00000019970.16	ENSMUST00000100036.10	2476	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	266.915376443206	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTGTCATGTGTTA	NA	False	NA	13	True	AATAAA	-19	NA	21868121	21875797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21868307_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000100043.3	chr2	+	2100	2	FSM	ENSMUSG00000075304.3	ENSMUST00000100043.3	2100	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTCCTCTGATCTTT	NA	False	NA	23	True	AATAAA	-40	NA	70305266	70308073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70305661_70306367
ENSMUST00000100052.11	chr16	-	3899	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_2	81.6059366032208	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2273	False	NA	NA	False	AATATA	-16	NA	21982049	21877758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUST00000100077.5	chr10	-	3086	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	37	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	4337475	4317074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_4319852_4324569_4324755_4337351
ENSMUST00000100078.10	chr10	-	3226	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	10.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGATCGTTTTCTTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	4338108	4317074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_4319852_4324569_4324755_4337844
ENSMUST00000100099.10	chr16	+	2235	12	FSM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	76.7194093342424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	448	False	NA	8	True	AATAAA	-22	NA	18066925	18071366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUST00000100115.3	chrY	-	1851	1	FSM	ENSMUSG00000075359.3	ENSMUST00000100115.3	1851	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCAGAATGCTATTGGA	NA	False	NA	NA	False	AATAAA	-4	NA	10643107	10641256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrY_-_10641300_10643100
ENSMUST00000100130.10	chr11	+	2386	5	FSM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	128.437484793186	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGCTTCCAACCTAAGT	NA	False	NA	NA	False	NA	NA	NA	120839892	120849826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120839977_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ENSMUST00000100134.10	chr11	+	1925	13	FSM	ENSMUSG00000025156.18	ENSMUST00000100134.10	1925	13	0	0	0	0	multi-exon	TRUE	canonical	3	682	junction_1	150.079122650539	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCCCAAGGCTCCTTTC	1394	False	NA	-3	True	ATTAAA	-14	NA	120675100	120679923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ENSMUST00000100143.10	chr2	-	8799	20	FSM	ENSMUSG00000075376.11	ENSMUST00000100143.10	8799	20	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	8.50289180073869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTTTTCTTAGTGT	NA	False	NA	-4	True	AATAAA	-17	NA	37304833	37260084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527
ENSMUST00000100162.5	chr15	+	1676	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	173.470458580128	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTGTGATGGCTCTGT	NA	False	NA	32	True	AATAAA	-20	NA	103181336	103208295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUST00000100164.5	chr15	+	1983	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCAATGTCTGATGGTTTC	5972	False	NA	30	True	AATAAA	-24	NA	102942820	102945278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102943588_102944062
ENSMUST00000100167.10	chr16	+	6792	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	17.5139626837814	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGACTGAAGAGATGACT	7158	False	NA	NA	False	AAAAAG	-4	NA	14179423	14293601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ENSMUST00000100171.3	chr2	+	2613	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	0	0	0	0	multi-exon	FALSE	canonical	3	2314	junction_3	220.40537791135	4033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGGTGTGTCTTTCTT	NA	False	NA	18	True	ACTAAA	-14	NA	34662106	34666543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ENSMUST00000100193.8	chr11	+	2924	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	196.831569283656	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTTTTTTTCTGGAGT	NA	False	NA	86	True	AATAAA	-11	NA	117222545	117253134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000100196.9	chr16	+	1755	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_11	10.4029910228848	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGAAGTGTTTGCTCT	1280	False	NA	17	True	AATAAA	-18	NA	5051484	5062767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
ENSMUST00000100202.10	chr11	-	4619	19	FSM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	6.47335469348423	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTTGTGAACGTATTCG	3349	False	NA	NA	False	AATAAA	-42	NA	116303830	116227178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116229657_116235020_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ENSMUST00000100203.10	chr15	+	8914	38	FSM	ENSMUSG00000023026.17	ENSMUST00000100203.10	8914	38	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	10.5011043281662	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTTTAATTCTTAAAC	4857	False	NA	9	True	AATAAA	-13	NA	99936544	100117354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053038_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ENSMUST00000100206.4	chr15	+	6530	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	85.9835643209406	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870660	99914239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ENSMUST00000100208.9	chr2	-	1859	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAAAAGCATTGGAG	4974	False	NA	10	True	NA	NA	NA	31031814	30923010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUST00000100208.9-0	chr2	-	5446	15	FSM	ENSMUSG00000075415.14	ENSMUST00000100208.9	1859	15	-206	-3381	0	-1423	multi-exon	FALSE	canonical	3	84	junction_6	25.508001945768	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTGTGTATTTTAAG	4768	False	NA	-17	True	AATAAA	-15	NA	31032020	30919629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUST00000100215.11	chr2	-	1749	12	FSM	ENSMUSG00000026860.17	ENSMUST00000100215.11	1749	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	118.792269553979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCAGTCCATGAG	NA	False	NA	-10	True	AATAAA	-16	NA	30249252	30234820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000100219.5	chr2	-	2104	1	FSM	ENSMUSG00000075419.5	ENSMUST00000100219.5	2104	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	2248	False	NA	24	True	AATAAA	-44	NA	30176346	30174242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30174200_30176300
ENSMUST00000100220.5	chr2	-	1805	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_5	38.9436974393538	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCTCTAGACCCTGAT	NA	False	NA	-28	True	AATAAA	-15	NA	30068462	30063482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ENSMUST00000100237.4	chr2	+	4160	12	FSM	ENSMUSG00000026803.18	ENSMUST00000100237.4	4160	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	12.4628373193903	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950273	28977668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118
ENSMUST00000100248.6	chr11	-	1375	8	FSM	ENSMUSG00000018727.20	ENSMUST00000100248.6	1375	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	53.4469028903587	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600352	113588997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
ENSMUST00000100262.4	chr15	-	3183	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGGTTTGTTTCCCTC	NA	False	NA	-3	True	ATTAAA	-24	NA	96539843	96473867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ENSMUST00000100262.4-0	chr15	-	2484	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	441	258	441	-258	multi-exon	FALSE	canonical	3	92	junction_15	98.2259074220691	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96539402	96474125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ENSMUST00000100299.11	chr14	-	6476	53	FSM	ENSMUSG00000025558.20	ENSMUST00000100299.11	6476	53	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	14.7807822414323	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGCCAAGCACAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	122035249	121780837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121828722_121828767_121831747_121831796_121832953_121833021_121835053_121835166_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_122034901
ENSMUST00000100301.11	chr7	+	3127	18	FSM	ENSMUSG00000078816.11	ENSMUST00000100301.11	3127	18	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_10	8.64845927034781	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGATGTTTTCTTGTA	NA	False	NA	11	True	AATAAA	-22	NA	3352037	3379615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ENSMUST00000100302.4	chr11	-	2265	7	FSM	ENSMUSG00000050965.15	ENSMUST00000100302.4	2265	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.0736223860962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGACGCTCATGTT	NA	False	NA	NA	False	TATAAA	-38	NA	107870465	107829002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107870236
ENSMUST00000100305.8	chr11	+	5953	30	FSM	ENSMUSG00000020721.17	ENSMUST00000100305.8	5953	30	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	34.5017189252804	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	107438781	107563113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872
ENSMUST00000100309.3	chr15	+	6644	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	7.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATATATTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	90108513	90117674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_90108812_90109859_90110058_90111526
ENSMUST00000100327.10	chr14	-	3634	21	FSM	ENSMUSG00000022119.16	ENSMUST00000100327.10	3634	21	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_11	26.8445059555955	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAATAGGACATATGCAA	NA	False	NA	NA	False	AGTAAA	-16	NA	105414759	105352421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ENSMUST00000100339.9	chr14	-	809	4	FSM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	229	52	0	-52	multi-exon	FALSE	canonical	3	419	junction_3	9.8770215933527	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGTTAAGAAGGTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	101877893	101871253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_101871829_101874389_101874543_101877723_101877736_101877824
ENSMUST00000100370.2	chr15	-	2270	4	FSM	ENSMUSG00000075511.10	ENSMUST00000100370.2	2270	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	6.97614984548545	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGGAAAGATGAAG	250	False	NA	NA	False	NA	NA	NA	83251478	83241760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83243152_83248020_83248130_83249229_83249712_83251190
ENSMUST00000100375.11	chr15	-	3157	8	FSM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	194.457277192347	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGAGCTATAATGTCT	NA	False	NA	-13	True	AATAAA	-15	NA	83033532	83010178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
ENSMUST00000100378.4	chr11	+	4573	8	FSM	ENSMUSG00000051455.14	ENSMUST00000100378.4	4573	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	7.57277616039918	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTAGTTTCATTTTT	NA	False	NA	3	True	AATAAA	-13	NA	102556413	102573063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102556657_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
ENSMUST00000100387.11	chr11	+	1876	3	FSM	ENSMUSG00000034757.16	ENSMUST00000100387.11	1876	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	44	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	16	True	AATAAA	-18	NA	102175764	102180063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102175915_102178133_102178698_102178901
ENSMUST00000100392.5	chr11	+	2547	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_3	21.1502561056204	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTCCCACACCTCCT	NA	False	NA	15	True	AATAAA	-22	NA	102139707	102156013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ENSMUST00000100398.5	chr11	-	3577	12	FSM	ENSMUSG00000017314.13	ENSMUST00000100398.5	3577	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3.33773813648833	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCACGGCCTCTGAT	674	False	NA	NA	False	NA	NA	NA	101973310	101948349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101973154
ENSMUST00000100404.6	chr5	+	4570	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGGCTTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-22	NA	149601694	149686064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ENSMUST00000100404.6-0	chr5	+	1854	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	0	2716	0	-724	multi-exon	FALSE	canonical	3	479	junction_13	51.6933659344471	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTTTTCTCCATTG	NA	False	NA	19	True	AATAAA	-15	NA	149601694	149683348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ENSMUST00000100410.10	chr5	+	3148	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	101.142119787266	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTTGGTTTCATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	149121475	149152241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ENSMUST00000100414.12	chr11	+	1220	6	FSM	ENSMUSG00000078656.12	ENSMUST00000100414.12	1220	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	486.921595331322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTGTTACTACT	NA	False	NA	16	True	ATTAAA	-13	NA	101144554	101150371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149595
ENSMUST00000100417.3	chr11	-	3636	15	FSM	ENSMUSG00000006920.15	ENSMUST00000100417.3	3636	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	38.227634517667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAGCTGCAGTTTAT	2642	False	NA	NA	False	GATAAA	-21	NA	101117252	101088214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479_101109547_101117221
ENSMUST00000100458.4	chr2	-	2169	5	FSM	ENSMUSG00000026646.17	ENSMUST00000100458.4	2169	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.1089793802908	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGGGTCTGGGAGT	NA	False	NA	-11	True	AATAAA	-17	NA	3475456	3458617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475373
ENSMUST00000100461.7	chr5	-	2725	18	FSM	ENSMUSG00000038780.15	ENSMUST00000100461.7	2725	18	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	50.6104602342352	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCAGCCTCCTTGGCAC	NA	False	NA	-39	True	AATAAA	-16	NA	144902657	144815920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ENSMUST00000100472.10	chr4	-	881	6	FSM	ENSMUSG00000003038.16	ENSMUST00000100472.10	881	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1086.09951661899	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTCTGCCTAAAAGTCA	NA	False	NA	NA	False	TATAAA	-22	NA	133695204	133692330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694070_133694107_133694267_133694313_133695105
ENSMUST00000100473.5	chr14	+	5603	40	FSM	ENSMUSG00000060012.10	ENSMUST00000100473.5	5603	40	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_38	17.1265545036071	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCACCTCCCTTGTGGAC	NA	False	NA	NA	False	NA	NA	NA	64889979	65043745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_64890106_64907072_64907167_64945940_64945954_64951522_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037896_65040473_65041180_65043479
ENSMUST00000100483.3	chr5	-	1073	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	226.993881464286	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846665	143839521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
ENSMUST00000100484.6	chr15	-	1899	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_9	114.082520258677	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	2745	False	NA	-11	True	AATAAA	-24	NA	77855013	77843197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUST00000100487.6	chr5	+	4325	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGACACTGTTGGTGTT	NA	False	NA	NA	False	AATAAA	-31	NA	143803542	143841069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUST00000100487.6-0	chr5	+	2748	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	43	1534	0	-1534	multi-exon	FALSE	canonical	3	166	junction_1	19.8185647866863	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	20	True	AATAAA	-25	NA	143803585	143839535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUST00000100497.11	chr5	-	1920	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	0	0	0	0	multi-exon	FALSE	canonical	3	4052	junction_3	78.6180640819907	5087	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTCTGTGGCTTT	8889	False	NA	-1	True	AATAAA	-27	NA	142892509	142888869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ENSMUST00000100500.9	chr11	-	3133	27	FSM	ENSMUSG00000017210.15	ENSMUST00000100500.9	3133	27	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_20	46.7567196069438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTCCGTGTGGCCTGCA	NA	False	NA	NA	False	NA	NA	NA	98620236	98595725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608534_98608592_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ENSMUST00000100505.3	chr5	+	3431	14	FSM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	24.1966793164027	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690820	140705134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ENSMUST00000100507.8	chr5	+	2945	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	0	0	0	0	multi-exon	TRUE	canonical	3	2428	junction_3	310.145868707844	6610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCCTGATCTCTT	NA	False	NA	15	True	AATAAA	-16	NA	140405082	140429115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ENSMUST00000100510.6	chr14	-	747	1	FSM	ENSMUSG00000075581.6	ENSMUST00000100510.6	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCTTTAAGAGCAACAA	NA	False	NA	NA	False	NA	NA	NA	74034730	74033983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_74034000_74034700
ENSMUST00000100517.10	chr5	+	1522	7	FSM	ENSMUSG00000036817.15	ENSMUST00000100517.10	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	372.028971392761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATATTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	139186421	139214095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139213287
ENSMUST00000100524.3	chr5	+	3266	5	FSM	ENSMUSG00000036898.17	ENSMUST00000100524.3	869	5	-61	-2336	0	-2031	multi-exon	FALSE	canonical	3	9	junction_4	23.7276210354093	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGAATGACGGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	138439740	138456925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454140
ENSMUST00000100527.13	chr15	-	1881	12	FSM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_7	445.848082194703	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGTGTCTGAAATTGG	NA	False	NA	0	True	CATAAA	-25	NA	75952762	75942030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUST00000100528.5	chr11	-	3997	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	0	0	0	0	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTGGAATGAACTTTT	5467	False	NA	NA	False	AATAAA	-19	NA	95956214	95938257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ENSMUST00000100528.5-0	chr11	-	2932	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	0	1065	0	-1065	multi-exon	FALSE	canonical	3	1035	junction_3	37.418429802557	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGAGGAAGCGCCTGTG	5467	False	NA	-9	True	AATAAA	-13	NA	95956214	95939322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ENSMUST00000100538.4	chr15	-	3362	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	44.618492997359	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713764	75626278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ENSMUST00000100539.10	chr5	+	2320	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	0	1663	0	197	multi-exon	FALSE	canonical	3	319	junction_1	32.7595405950694	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATGGAGGTTGGTGTG	NA	False	NA	9	True	ATTAAA	-20	NA	137744257	137758007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
ENSMUST00000100544.11	chr5	-	2858	13	FSM	ENSMUSG00000029722.16	ENSMUST00000100544.11	2858	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	43.0686628794327	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	1810	False	NA	NA	False	NA	NA	NA	137682942	137648746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137658423_137658457_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ENSMUST00000100555.4	chr15	-	1278	1	FSM	ENSMUSG00000075609.4	ENSMUST00000100555.4	1278	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCATCCTTTGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	73953360	73952082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73952100_73953400
ENSMUST00000100614.6	chr14	+	438	1	FSM	ENSMUSG00000094974.2	ENSMUST00000100614.6	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATGCTGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	53140249	53140687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_53140200_53140700
ENSMUST00000100635.5	chr15	-	5565	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTCCTTTTTTTTTC	NA	False	NA	NA	False	AATACA	-14	NA	60696929	60690842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_60695841_60696362
ENSMUST00000100638.4	chr14	+	1234	7	FSM	ENSMUSG00000072571.4	ENSMUST00000100638.4	1234	7	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	6.83130051063973	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGACGCCAGGCGCTG	NA	False	NA	23	True	AATAAA	-37	NA	52254321	52257251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52254399_52254512_52254655_52255207_52255319_52255410_52255468_52255998_52256110_52256188_52256336_52256662
ENSMUST00000100650.10	chr5	-	3487	29	FSM	ENSMUSG00000023079.15	ENSMUST00000100650.10	3487	29	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_7	45.9988353889841	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	134485440	134387507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUST00000100652.10	chr5	-	3693	30	FSM	ENSMUSG00000023079.15	ENSMUST00000100652.10	3693	30	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	54.3409328203516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACACAAACACAAAAC	NA	False	NA	NA	False	NA	NA	NA	134485546	134387488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUST00000100655.5	chr15	-	1341	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_4	117.266534015464	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTCAGCTGCTCTCAG	NA	False	NA	-9	True	AATAAA	-40	NA	57897711	57885654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
ENSMUST00000100676.3	chr14	-	1633	3	FSM	ENSMUSG00000021835.16	ENSMUST00000100676.3	1633	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	6484	False	NA	NA	False	NA	NA	NA	46628007	46621163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_46622170_46623171_46623552_46627760
ENSMUST00000100705.11	chr11	-	1447	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	13.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTATTAATCATTTTG	NA	False	NA	-14	True	AATAAA	-15	NA	83959183	83938866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_83940137_83941657_83941747_83959095
ENSMUST00000100709.7	chr5	+	1425	7	FSM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	170.424388578109	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTTTTGTACCTTTTT	4396	False	NA	91	True	NA	NA	NA	124583555	124599023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUST00000100709.7-0	chr5	+	2761	7	FSM	ENSMUSG00000049327.18	ENSMUST00000100709.7	1425	7	12	-1348	0	0	multi-exon	FALSE	canonical	3	345	junction_1	170.424388578109	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	4408	False	NA	29	True	AATAAA	-38	NA	124583567	124600371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124583792_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUST00000100718.4	chr11	-	1386	10	FSM	ENSMUSG00000018841.18	ENSMUST00000100718.4	1386	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	41.0088819045549	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGGTCTCAAGTTTTCT	NA	False	NA	-107	True	NA	NA	NA	82781415	82769562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780494_82780637_82780795_82780858_82781163
ENSMUST00000100729.9	chr5	+	1359	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	68	1170	0	434	multi-exon	FALSE	canonical	3	158	junction_2	18.6868938028769	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCTGTCAGTATATT	NA	False	NA	22	True	NA	NA	NA	123366320	123387024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ENSMUST00000100737.10	chr5	+	4936	13	FSM	ENSMUSG00000029468.18	ENSMUST00000100737.10	4936	13	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_11	5.09015935135848	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAATTCTCTTTGATT	NA	False	NA	NA	False	AATAAA	-21	NA	122781973	122822352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ENSMUST00000100747.3	chr5	+	2805	7	FSM	ENSMUSG00000064267.14	ENSMUST00000100747.3	2805	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	6.12825877028341	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATCGGCTCCTTTTTGTT	NA	False	NA	28	True	AATAAA	-39	NA	122348196	122380360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122348456_122354294_122354427_122371482_122371756_122375743_122375849_122376468_122376701_122378276_122378390_122378669
ENSMUST00000100750.10	chrX	-	1785	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	57	8696	0	0	multi-exon	FALSE	canonical	3	104	junction_3	52.083266666624	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTAGAGTTTCGTGGC	NA	False	NA	NA	False	AATAAA	-22	NA	73129218	73078893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
ENSMUST00000100765.11	chr6	+	5356	6	FSM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	93.1227147370608	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGATTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	149210971	149236428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_149211403_149211819_149211876_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ENSMUST00000100770.9	chr5	-	5599	16	FSM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_6	9.90263713473448	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCATTTGGTCTGTTGT	852	False	NA	0	True	AATAAA	-23	NA	121329460	121268595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
ENSMUST00000100782.4	chr11	+	2473	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	46.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTAAAAATGCATTTGG	2646	False	NA	NA	False	ATTAAA	-26	NA	77985533	78046901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77985618_78033918_78034041_78044634
ENSMUST00000100782.4-1	chr11	+	3725	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	0	-1252	0	627	multi-exon	FALSE	canonical	3	49	junction_2	46.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACACCAACCTCATCT	2646	False	NA	NA	False	TATAAA	-6	NA	77985533	78048153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77985618_78033918_78034041_78044634
ENSMUST00000100784.9	chr11	+	2699	12	FSM	ENSMUSG00000061981.15	ENSMUST00000100784.9	2699	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	138.547303733782	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTTTCATCGTATATTC	NA	False	NA	18	True	AATAAA	-15	NA	77928766	77951257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUST00000100799.9	chr14	+	802	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_1	6301.70655898508	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198725	4200736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
ENSMUST00000100802.11	chr11	+	5158	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTTCTGATTTTTTGT	NA	False	NA	17	True	ATTAAA	-18	NA	77576980	77603567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ENSMUST00000100802.11-0	chr11	+	3308	4	FSM	ENSMUSG00000037857.17	ENSMUST00000100802.11	5158	4	17	1833	0	-1833	multi-exon	FALSE	canonical	3	165	junction_1	19.0146142626022	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGATTGGGTTCCTTTGG	NA	False	NA	18	True	AATATA	-14	NA	77576997	77601734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77577334_77582367_77584081_77596334_77596368_77600508
ENSMUST00000100811.6	chr14	-	1108	4	FSM	ENSMUSG00000072676.13	ENSMUST00000100811.6	1108	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	63.5627424063989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTTCTCTTGATCGTGA	NA	False	NA	-13	True	NA	NA	NA	25927674	25924593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927468
ENSMUST00000100812.4	chr11	+	3476	19	FSM	ENSMUSG00000011877.14	ENSMUST00000100812.4	3476	19	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_15	38.5310921429486	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAGGTGGGGCTTAGC	NA	False	NA	30	True	AATAAA	-33	NA	77384396	77398612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ENSMUST00000100816.8	chr5	+	9296	31	FSM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	21.22063984793	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGAGTGGCTCTTTTCCC	NA	False	NA	30	True	AATAAA	-18	NA	118698783	118903503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ENSMUST00000100837.11	chr14	-	3564	19	FSM	ENSMUSG00000021820.19	ENSMUST00000100837.11	3564	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	6.2610396328366	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	0	True	AATAAA	-18	NA	20844119	20784942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUST00000100841.9	chr6	-	4151	21	FSM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	34.6389953664941	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGTTTGCTTGGTAGAA	NA	False	NA	0	True	AATAAA	-23	NA	137548015	137454665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137547699
ENSMUST00000100844.6	chr14	-	1817	14	FSM	ENSMUSG00000021814.18	ENSMUST00000100844.6	2904	14	180	907	0	361	multi-exon	FALSE	canonical	2	9	junction_9	337.357184335068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8170	False	NA	-18	True	AATAAA	-19	NA	20530009	20506235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517525_20517592_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUST00000100857.10	chr6	-	5104	7	FSM	ENSMUSG00000030203.18	ENSMUST00000100857.10	5104	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	14.7309198626562	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTGAGACGTGGCT	NA	False	NA	-3	True	AATAAA	-24	NA	134769588	134692435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
ENSMUST00000100864.7	chr6	+	2842	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTCCTCATTAGTT	NA	False	NA	NA	False	AATAAA	-19	NA	133081871	133084713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_133081900_133084700
ENSMUST00000100986.4	chr12	+	5560	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_13	20.3537869692824	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTAATATGTTTTTTGTT	NA	False	NA	5	True	AATAAA	-18	NA	116244815	116336711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ENSMUST00000100993.9	chr6	+	4849	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTGTATATATAGTGGG	NA	False	NA	NA	False	NA	NA	NA	120643542	120743865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ENSMUST00000100993.9-0	chr6	+	9407	19	FSM	ENSMUSG00000071226.12	ENSMUST00000100993.9	4849	19	-272	-4286	-59	0	multi-exon	FALSE	canonical	3	70	junction_14	24.9109525220445	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTTTCGTGTATGTG	NA	False	NA	4	True	TATAAA	-17	NA	120643270	120748151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ENSMUST00000101004.9	chr11	+	3507	18	FSM	ENSMUSG00000020893.18	ENSMUST00000101004.9	3507	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	5.21177798431451	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGCCCCATTCCCCCT	NA	False	NA	NA	False	NA	NA	NA	68986042	68997284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68986130_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
ENSMUST00000101018.11	chr12	+	6641	19	FSM	ENSMUSG00000072825.12	ENSMUST00000101018.11	6641	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.8627764261712	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCGCCTCGGCCCTCTTC	9013	False	NA	31	True	AATAAA	-31	NA	112688607	112713026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ENSMUST00000101032.10	chr6	+	4611	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.30296743340222	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	116314993	116386501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ENSMUST00000101044.9	chr6	-	4586	24	FSM	ENSMUSG00000030302.18	ENSMUST00000101044.9	4586	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	10.3278945786264	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACATAAAAAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	113911642	113725254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113897469_113897565_113911441
ENSMUST00000101049.9	chr11	+	2884	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_18	22.4427858997362	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCAGTGTGGGGTC	NA	False	NA	15	True	AATAAA	-15	NA	64869899	64892426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUST00000101051.5	chr6	+	2142	5	FSM	ENSMUSG00000034023.17	ENSMUST00000101051.5	2142	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	30.62984655528	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATTCTTAGAGGATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	113508664	113515680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884
ENSMUST00000101055.5	chr12	+	2627	11	FSM	ENSMUSG00000021258.11	ENSMUST00000101055.5	2627	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	24.24479325546	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTGTGAGTACAGCC	NA	False	NA	26	True	AATAAA	-19	NA	108145996	108169618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_108146152_108152619_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
ENSMUST00000101070.5	chr6	+	1201	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTGTTGGAGATTTGAT	NA	False	NA	33	True	AATAAA	-37	NA	113419529	113425190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113419759_113424218
ENSMUST00000101071.4	chr12	-	1299	3	FSM	ENSMUSG00000041359.15	ENSMUST00000101071.4	1299	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	973.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAATTTCTCGTGCTCTTG	NA	False	NA	-10	True	AATAAA	-15	NA	105188975	105183016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_105183961_105184917_105185089_105188791
ENSMUST00000101075.11	chr11	+	2193	9	FSM	ENSMUSG00000042298.19	ENSMUST00000101075.11	2193	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	62.3493183603478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTATGGATTCTAAT	NA	False	NA	16	True	AATAAA	-12	NA	62172307	62206072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ENSMUST00000101087.10	chr5	+	3625	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_6	28.4995126663987	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGGTATTGGCATTTT	NA	False	NA	28	True	AATAAA	-36	NA	77122529	77147784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ENSMUST00000101118.4	chr6	-	4503	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	17.7552809045647	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGAGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	100264446	100205525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ENSMUST00000101122.3	chr6	+	2388	1	FSM	ENSMUSG00000072875.3	ENSMUST00000101122.3	2388	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTTTTGTTTTTGAG	3767	False	NA	10	True	AATATA	-20	NA	99669639	99672027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_99669600_99672000
ENSMUST00000101126.3	chr6	-	4951	19	FSM	ENSMUSG00000030029.15	ENSMUST00000101126.3	4951	19	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_14	16.0804305574689	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTAAGTGTGTGCGGCGG	6760	False	NA	NA	False	AATAAA	-14	NA	94677118	94581516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_94582985_94583083_94583345_94584272_94584420_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
ENSMUST00000101146.4	chr12	+	1913	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	15.3766056072203	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCACATATTTATTAT	NA	False	NA	14	True	NA	NA	NA	98594455	98636071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUST00000101150.9	chr11	-	3771	10	FSM	ENSMUSG00000020472.15	ENSMUST00000101150.9	3771	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	45.5777723603659	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397470	59376345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394502_59394637_59394973_59395081_59396653_59396789_59396989
ENSMUST00000101165.9	chr12	+	2158	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	14.3544418212622	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGACTGTTCCTTCTCAA	NA	False	NA	10	True	AATAAA	-23	NA	88327323	88428489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUST00000101168.4	chr12	-	1840	2	FSM	ENSMUSG00000079029.3	ENSMUST00000101168.4	1840	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAGAAAAAGATCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88241270	88237409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_88239059_88241079
ENSMUST00000101180.8	chrX	+	2029	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	4.6785562825394	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	148567468	148609690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
ENSMUST00000101181.5	chrX	+	1977	7	FSM	ENSMUSG00000072923.7	ENSMUST00000101181.5	1977	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.06622805119022	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148377565	148419760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_148377658_148394767_148394894_148395612_148395693_148399354_148400266_148411437_148411520_148412325_148412376_148419124
ENSMUST00000101186.10	chrX	+	2026	7	FSM	ENSMUSG00000096834.8	ENSMUST00000101186.10	2026	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	5.30461015427985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147446593	147486845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_147446686_147463739_147463866_147464585_147464666_147468313_147469273_147478430_147478513_147479317_147479368_147486208
ENSMUST00000101190.11	chrX	+	1972	8	FSM	ENSMUSG00000096834.8	ENSMUST00000101190.11	1972	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	4.38922614163921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147446599	147486845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_147446686_147463739_147463862_147464581_147464666_147468313_147468993_147469040_147469273_147478430_147478513_147479317_147479368_147486208
ENSMUST00000101195.9	chr5	+	5432	20	FSM	ENSMUSG00000029174.19	ENSMUST00000101195.9	5432	20	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	77.9717968757502	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTGTTGTCTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	64317553	64508829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ENSMUST00000101198.9	chrX	+	4443	5	FSM	ENSMUSG00000047045.18	ENSMUST00000101198.9	4443	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.9218138692896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTAGCATTTTGAATC	NA	False	NA	8	True	AATAAA	-15	NA	141464410	141621234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_141464553_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ENSMUST00000101212.9	chrX	-	1996	9	FSM	ENSMUSG00000072944.12	ENSMUST00000101212.9	1996	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_8	135.330151850946	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963317	138907553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963161
ENSMUST00000101227.3	chrX	+	2045	4	FSM	ENSMUSG00000031428.12	ENSMUST00000101227.3	2045	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGTGTGCATTACCTGA	7905	False	NA	NA	False	ATTAAA	-11	NA	135893907	135896865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135894154_135894455_135894511_135894679_135894820_135895261
ENSMUST00000101251.8	chrX	+	3085	22	FSM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	51.4515821537341	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	133208903	133263385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUST00000101258.5	chr5	+	2796	12	FSM	ENSMUSG00000050248.12	ENSMUST00000101258.5	2796	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	6.81029847284656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGAGCCTGCAATCCT	8951	False	NA	NA	False	NA	NA	NA	37495951	37545108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028
ENSMUST00000101270.5	chr11	+	5213	22	FSM	ENSMUSG00000036644.16	ENSMUST00000101270.5	5213	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_18	41.5114660552835	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTTGTTTAAAGTACA	NA	False	NA	10	True	AATAAA	-18	NA	50022222	50063612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
ENSMUST00000101293.11	chr11	+	2729	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	25.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGTGTGTCCTAGG	NA	False	NA	NA	False	AATAAA	-27	NA	49141338	49153857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49141483_49142376_49142502_49151397
ENSMUST00000101301.10	chr6	+	2299	15	FSM	ENSMUSG00000052337.16	ENSMUST00000101301.10	2299	15	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_4	278.631248156016	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTAGGAAGAGTTGTGTA	NA	False	NA	NA	False	NA	NA	NA	71808396	71851914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUST00000101336.10	chrX	-	1090	3	FSM	ENSMUSG00000051159.17	ENSMUST00000101336.10	1090	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	78.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTTAACTTGCAAAGA	NA	False	NA	-23	True	AAAAAG	-20	NA	101295458	101291009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101291615_101292168_101292294_101295098
ENSMUST00000101340.11	chr11	-	700	6	FSM	ENSMUSG00000020415.17	ENSMUST00000101340.11	700	6	0	0	0	0	multi-exon	FALSE	canonical	3	4089	junction_5	2240.31940579909	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGATTGTGAATACTTA	NA	False	NA	-31	True	AATAAA	-15	NA	43317029	43311095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317000
ENSMUST00000101343.2	chr6	+	1725	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_4	68.2692280606717	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATCAAGCTTTAAAA	NA	False	NA	19	True	AATAAA	-22	NA	66512451	66517975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ENSMUST00000101347.10	chr11	-	2053	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	83.011378068846	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	-12	True	AATAAA	-18	NA	40586030	40570140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
ENSMUST00000101354.10	chr5	-	1578	7	FSM	ENSMUSG00000004642.14	ENSMUST00000101354.10	1578	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_4	432.7992863005	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809650	33797398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33807086_33807192_33809306_33809424_33809538
ENSMUST00000101362.8	chrX	-	2371	13	FSM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_12	497.596780089618	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAAAAAACCT	NA	False	NA	NA	False	ATTAAA	-12	NA	100128958	100122826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128426_100128585_100128877
ENSMUST00000101367.9	chr6	-	1519	10	FSM	ENSMUSG00000029780.15	ENSMUST00000101367.9	1519	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	89.8419737478734	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCCAGATCATAT	9834	False	NA	0	True	AATAAA	-26	NA	56878871	56859384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56874759_56874815_56878822
ENSMUST00000101375.5	chr11	-	966	10	FSM	ENSMUSG00000057113.14	ENSMUST00000101375.5	966	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	6470.30156337304	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCTGGTGTCACTGA	NA	False	NA	-7	True	ATTAAA	-11	NA	33113076	33105327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_33105432_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUST00000101388.4	chrX	+	5619	1	FSM	ENSMUSG00000073062.4	ENSMUST00000101388.4	5619	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGCTGTGGTCTTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	93768174	93773793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_93768200_93773800
ENSMUST00000101394.5	chr11	-	1315	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	6	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAGTGTCATTTCT	NA	False	NA	NA	False	AATAAA	-33	NA	30936350	30926706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_30927747_30929564_30929601_30936111
ENSMUST00000101434.5	chr5	+	2276	3	FSM	ENSMUSG00000118332.2	ENSMUST00000101434.5	2276	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGTATGTTCTCCTT	NA	False	NA	26	True	AATAAA	-39	NA	143534515	143550280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143534890_143537163_143537297_143548511
ENSMUST00000101445.11	chr6	+	2761	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2.77263412660235	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTGTCTTGCCTTGACC	9713	False	NA	18	True	AATAAA	-23	NA	47930323	47942234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
ENSMUST00000101454.9	chrX	-	8345	46	FSM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_27	88.6461017644018	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	False	NA	-5	True	AATAAA	-23	NA	73290140	73267068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUST00000101471.4	chr5	+	3451	26	FSM	ENSMUSG00000061576.16	ENSMUST00000101471.4	4491	26	0	1040	0	0	multi-exon	TRUE	canonical	2	5	junction_22	2.910395162173	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATAAAGAGATTATTCT	NA	False	NA	NA	False	NA	NA	NA	27466972	27931458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_27467360_27587752_27587868_27603911_27604011_27656185_27656281_27674408_27674484_27742979_27743033_27762549_27762632_27803799_27803921_27836376_27836532_27839506_27839605_27857174_27857299_27858697_27858737_27866584_27866693_27868427_27868520_27869710_27869759_27871407_27871527_27901847_27901896_27914447_27914547_27917605_27917676_27919369_27919565_27923451_27923507_27926042_27926155_27927670_27927730_27928369_27928443_27928538_27928613_27930602
ENSMUST00000101472.4	chr12	-	1200	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCTAGTGTTTTGTGCT	NA	False	NA	-7	True	AATAAA	-15	NA	40088024	40085820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_40086833_40087836
ENSMUST00000101477.2	chr11	+	3703	6	FSM	ENSMUSG00000020134.14	ENSMUST00000101477.2	3703	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	15.0598804776134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGCGAATTTGTCTGTG	NA	False	NA	27	True	AGTAAA	-15	NA	21085468	21100323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ENSMUST00000101486.5	chrX	+	1564	9	FSM	ENSMUSG00000073125.11	ENSMUST00000101486.5	1564	9	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_5	296.174779479955	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCAGACTTGTTGGCA	NA	False	NA	NA	False	AATAAA	-8	NA	72235827	72246526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUST00000101492.10	chr6	-	6742	9	FSM	ENSMUSG00000037172.15	ENSMUST00000101492.10	6742	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.09748712602592	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGCTGTGATCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	40413069	40378308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388679_40395425_40395580_40399659_40399819_40400657_40400758_40412791
ENSMUST00000101499.10	chr12	-	3900	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	37.6542162313864	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTAGATGAGTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	31549615	31534934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
ENSMUST00000101506.10	chrX	-	2429	6	FSM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	81.8300678235085	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510968_69513723_69513901_69520583
ENSMUST00000101509.9	chrX	-	4972	9	FSM	ENSMUSG00000035847.16	ENSMUST00000101509.9	4972	9	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_4	5.15842757049084	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGGGTTCTTAATGT	NA	False	NA	62	True	AATAAA	-20	NA	69408690	69386674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_69390280_69394532_69394707_69396749_69396877_69401872_69402044_69403554_69403756_69404648_69404738_69406582_69406761_69407407_69407545_69408400
ENSMUST00000101525.9	chr11	+	1157	9	FSM	ENSMUSG00000020407.14	ENSMUST00000101525.9	1157	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	904.856126339983	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068106	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_9068163_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUST00000101526.9	chr11	+	1706	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	201.26273251648	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTGTCCTATTTGG	2416	False	NA	16	True	AATAAA	-26	NA	69886701	69890835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ENSMUST00000101527.3	chrX	-	6044	30	FSM	ENSMUSG00000062949.14	ENSMUST00000101527.3	6044	30	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_14	11.609582331096	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATGGGTATTCGAGTG	NA	False	NA	-10	True	AATAAA	-11	NA	59449172	59268652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ENSMUST00000101531.10	chrX	-	3671	25	FSM	ENSMUSG00000031139.17	ENSMUST00000101531.10	3671	25	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_24	117.379696095856	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59193060	59101315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59192833
ENSMUST00000101538.5	chr12	-	2245	4	FSM	ENSMUSG00000073158.5	ENSMUST00000101538.5	2245	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.7044966667418	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTTGTCTGTGAAATT	NA	False	NA	NA	False	NA	NA	NA	24147247	24093202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_24094856_24124359_24124421_24124622_24124750_24146843
ENSMUST00000101547.12	chr13	-	2147	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	18.9267594221045	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62706325	62664610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
ENSMUST00000101554.9	chr11	+	4106	23	FSM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	146.072267860866	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAGAACAACCACCT	NA	False	NA	-50	True	AAAAAG	-5	NA	6241665	6306578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6241770_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUST00000101560.4	chrX	+	3738	5	FSM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.6421930087218	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTCTGATTCTTTTA	NA	False	NA	6	True	AATAAA	-16	NA	55391759	55411034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_55391800_55393642_55394089_55398822_55399028_55407826_55407941_55408101
ENSMUST00000101561.8	chrX	-	951	8	FSM	ENSMUSG00000073177.9	ENSMUST00000101561.8	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.42165358301205	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTTTTTGCAATGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	55258241	55235186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_55235530_55239012_55239112_55241930_55242031_55242833_55242952_55246943_55246979_55247366_55247437_55248032_55248151_55258173
ENSMUST00000101568.5	chr12	+	241	3	FSM	ENSMUSG00000073184.5	ENSMUST00000101568.5	241	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAAAGGTAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	19342813	19351265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_19342877_19350884_19351012_19351214
ENSMUST00000101588.2	chrX	+	1536	2	FSM	ENSMUSG00000073207.2	ENSMUST00000101588.2	1536	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATGCCTGTGATTC	NA	False	NA	NA	False	AATAAA	-23	NA	51880076	51888345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_51880203_51886935
ENSMUST00000101610.10	chr11	+	2333	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	51.4605431374369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	9767	False	NA	16	True	AATAAA	-17	NA	5048925	5056091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUST00000101610.10-1	chr11	+	1828	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	507	-2	0	0	multi-exon	FALSE	canonical	3	72	junction_2	51.4605431374369	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	18	True	AATAAA	-19	NA	5049432	5056093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUST00000101614.10	chr6	-	4885	38	FSM	ENSMUSG00000059022.16	ENSMUST00000101614.10	4885	38	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	1.92367131343505	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGTATGTGTACTT	11	True	NA	NA	False	AATAAA	-18	NA	29507949	29482035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29482462_29482632_29482940_29483928_29484094_29484613_29484716_29484809_29484922_29485001_29485175_29485416_29485560_29487179_29487280_29487495_29487576_29489031_29489153_29490064_29490148_29490393_29490568_29491663_29491758_29491843_29491927_29492053_29492145_29492383_29492470_29493187_29493365_29495756_29495928_29496159_29496349_29496429_29496524_29496618_29496702_29496800_29496975_29497551_29497646_29497720_29497828_29497903_29498057_29498275_29498358_29498427_29498514_29498785_29498880_29498955_29499036_29499123_29499218_29501200_29501290_29502288_29502383_29502583_29502667_29502776_29502874_29504231_29504309_29504397_29504567_29505636_29505801_29507855
ENSMUST00000101616.9	chrX	-	3991	24	FSM	ENSMUSG00000031099.17	ENSMUST00000101616.9	3991	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	6.29309340266527	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTATTTCCTGTTTTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	46981396	46898246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_46898998_46900034_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975973_46976076_46981102
ENSMUST00000101618.9	chr14	+	1528	3	FSM	ENSMUSG00000022010.20	ENSMUST00000101618.9	1043	3	107	-592	107	0	multi-exon	FALSE	canonical	2	49	junction_1	1143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	3887	False	NA	28	True	AATAAA	-18	NA	76725982	76745202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76726116_76742688_76742738_76743856
ENSMUST00000101636.3	chrX	-	817	4	FSM	ENSMUSG00000073243.3	ENSMUST00000101636.3	817	4	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_3	3.74165738677394	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGCAAATTGAACAAATTTA	NA	False	NA	NA	False	ATTAAA	-12	NA	36474694	36473000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36473184_36473576_36473674_36473912_36474226_36474470
ENSMUST00000101638.4	chr11	-	3514	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	3359174	3294255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ENSMUST00000101638.4-0	chr11	-	2308	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	-15	1221	0	-1221	multi-exon	FALSE	canonical	3	97	junction_14	50.0611182012104	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	NA	False	NA	-22	True	GATAAA	-16	NA	3359189	3295476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ENSMUST00000101640.10	chr11	-	3711	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101640.10	3711	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	82.0873247760511	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	9814	False	NA	-6	True	AATAAA	-19	NA	3321376	3294255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3302899_3302918_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ENSMUST00000101642.10	chr11	-	3693	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	9814	False	NA	-6	True	AATAAA	-19	NA	3321376	3294255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ENSMUST00000101642.10-0	chr11	-	2472	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	0	1221	0	-1221	multi-exon	FALSE	canonical	3	120	junction_14	38.572023804931	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAGAGTCTGTTACTCG	9814	False	NA	-22	True	GATAAA	-16	NA	3321376	3295476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ENSMUST00000101663.10	chr6	+	3431	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTGCTTTAAGATCTT	-41	True	NA	8	True	ATTAAA	-16	NA	15720659	15802164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
ENSMUST00000101670.3	chrX	+	4002	21	FSM	ENSMUSG00000036769.15	ENSMUST00000101670.3	4002	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	11.664475984801	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATTTACAATCTCTACA	NA	False	NA	NA	False	AATAAA	-24	NA	23559334	23672264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_23559509_23559663_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUST00000101698.4	chrX	-	1838	2	FSM	ENSMUSG00000073294.5	ENSMUST00000101698.4	1838	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTTGTGGTACAA	NA	False	NA	1	True	AATAAA	-24	NA	5995473	5993272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_5994830_5995192
ENSMUST00000101800.7	chr17	+	1211	4	FSM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	11.8602979164381	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCGTTTCCGTGTTTGTTG	NA	False	NA	12	True	AATAAA	-12	NA	24955655	24961745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879
ENSMUST00000101801.8	chr7	+	1191	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_5	18.3804243694209	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTCTCTGGTTTTTCTT	NA	False	NA	7	True	AGTAAA	-16	NA	65729396	65739153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ENSMUST00000102476.5	chr2	+	860	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	121978166	121983564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ENSMUST00000102476.5-0	chr2	+	652	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	0	208	0	-208	multi-exon	FALSE	canonical	3	168	junction_2	12.4721912892465	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATCATATGCCAAACCC	NA	False	NA	NA	False	AATAAA	-20	NA	121978166	121983356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ENSMUST00000102478.4	chr11	+	1700	8	FSM	ENSMUSG00000017390.16	ENSMUST00000102478.4	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	13.6426701557867	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCGCTCTGTCTGTCTGT	NA	False	NA	18	True	AATAAA	-18	NA	78215025	78217586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUST00000102483.5	chr11	-	560	5	FSM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	10927	junction_1	3598.81438810061	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	5963	False	NA	-14	True	CATAAA	-1	NA	78074410	78071760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074344
ENSMUST00000102487.4	chr4	-	3244	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTCCTGTCTCAT	NA	False	NA	0	True	AATACA	-31	NA	140867077	140840311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ENSMUST00000102487.4-0	chr4	-	932	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	0	2312	0	1254	multi-exon	FALSE	canonical	3	169	junction_2	126.792043213374	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	-19	True	NA	NA	NA	140867077	140842623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ENSMUST00000102491.10	chr4	-	6582	37	FSM	ENSMUSG00000040860.17	ENSMUST00000102491.10	6582	37	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_36	18.7163690158055	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGTCCACTCAAATG	NA	False	NA	NA	False	NA	NA	NA	140781033	140743947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140780830
ENSMUST00000102494.8	chr11	-	3114	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACATCCTGTAAATTTA	NA	False	NA	-5	True	AATAAA	-28	NA	76969261	76935117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ENSMUST00000102494.8-0	chr11	-	1962	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	0	1152	0	-1152	multi-exon	FALSE	canonical	3	222	junction_6	27.2457947825593	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGAGTTTTTTTGGTT	NA	False	NA	-1	True	AATAAA	-18	NA	76969261	76936269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ENSMUST00000102496.8	chr2	-	1848	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102496.8	1848	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	68.2800117164606	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439796	120434718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439669
ENSMUST00000102497.10	chr2	-	1962	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	44.5394207416307	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTGGAAGTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	120439836	120434718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
ENSMUST00000102500.5	chr11	-	3540	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	0	959	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGCCTTTCTCAGAAG	NA	False	NA	-1	True	AATAAA	-22	NA	76108490	76101396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76104750_76108303
ENSMUST00000102501.10	chr2	-	4384	26	FSM	ENSMUSG00000027291.16	ENSMUST00000102501.10	4384	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_24	81.8461972238173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTTGAGCCTCCCTCT	NA	False	NA	NA	False	AATAAA	-18	NA	120183618	120146941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120177337_120177371_120180644_120180711_120183395
ENSMUST00000102503.10	chr4	-	1221	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_5	119.708489460771	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTGTTGTTT	5696	False	NA	-2	True	AATAAA	-44	NA	139079887	139074745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ENSMUST00000102505.10	chr11	+	4652	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102505.10	4652	32	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	55.4580209849872	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTCCTGTGAGTGT	7837	False	NA	15	True	AATAAA	-19	NA	75541329	75564736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUST00000102508.10	chr4	+	1674	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_1	117.624136553685	712	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGCGCTGGCTGTACGTTC	NA	False	NA	8	True	NA	NA	NA	138920209	139019129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ENSMUST00000102510.8	chr11	+	7249	43	FSM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	167.072261580339	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTTGCTGTTATG	NA	False	NA	20	True	AATAAA	-17	NA	75377645	75400275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75377716_75377906_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ENSMUST00000102512.11	chr4	-	1976	5	FSM	ENSMUSG00000041193.16	ENSMUST00000102512.11	1976	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	9.4339811320566	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTTTGGTGTATGCTA	NA	False	NA	0	True	AATAAA	-29	NA	138546566	138526554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310
ENSMUST00000102514.4	chr11	+	3525	2	FSM	ENSMUSG00000045287.7	ENSMUST00000102514.4	3525	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTTTTTTATTTCCTAA	NA	False	NA	8	True	AATAAA	-19	NA	75084608	75158595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75085121_75155582
ENSMUST00000102515.10	chr3	-	4347	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	11.8415464455544	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTGAGTCTTCTGTCCG	2698	False	NA	NA	False	ATTAAA	-20	NA	146518715	146435328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ENSMUST00000102520.9	chr11	-	5789	11	FSM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	313.620790127185	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGTGGGGTTTTTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	74614684	74564775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614025
ENSMUST00000102520.9-0	chr11	-	2182	11	FSM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	0	3607	0	-3607	multi-exon	FALSE	canonical	3	8	junction_10	313.620790127185	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGATGTAGATTGAACT	NA	False	NA	-5	True	AATAAA	-23	NA	74614684	74568382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614025
ENSMUST00000102525.11	chr5	+	899	7	FSM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_4	26.4638117687784	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGTACCGTGTATG	4488	False	NA	38	True	ATTAAA	-22	NA	122529940	122544242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
ENSMUST00000102528.11	chr5	+	2384	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	0	0	0	0	multi-exon	FALSE	canonical	3	2504	junction_1	178.873092815363	2870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTTTCTGTCAGCA	NA	False	NA	3	True	ATTAAA	-19	NA	122296340	122313336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ENSMUST00000102529.10	chr9	-	2875	18	FSM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	14.4607809903619	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATGGCCCCAGC	8158	False	NA	-24	True	AATAAA	-14	NA	107482601	107475553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482470
ENSMUST00000102531.7	chr9	-	2958	19	FSM	ENSMUSG00000057969.16	ENSMUST00000102531.7	2958	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	15.3664095744542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTGGAATGGCCCCAGC	4367	False	NA	-24	True	AATAAA	-14	NA	107486392	107475553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107486319
ENSMUST00000102533.11	chr4	+	1251	11	FSM	ENSMUSG00000001604.15	ENSMUST00000102533.11	1251	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	231.929816970565	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGCTGAGCCCTGGAT	6603	False	NA	15	True	AATAAA	-26	NA	135975262	136002209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992240_135995319_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUST00000102534.11	chr2	-	5229	17	FSM	ENSMUSG00000027347.19	ENSMUST00000102534.11	5229	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	14.2390308658981	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCAAAGTCGTGTGCT	NA	False	NA	-7	True	CATAAA	-16	NA	117173482	117110473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_117113158_117115333_117115714_117116552_117116706_117117322_117117360_117118304_117118450_117119097_117119208_117119825_117119931_117120796_117120878_117122146_117122423_117124234_117124352_117125189_117125364_117128942_117129097_117130923_117131056_117132441_117132505_117136258_117136365_117168756_117168942_117173155
ENSMUST00000102536.11	chr4	-	833	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	3915.89487090754	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGGTTTGGATTTGGTTG	NA	False	NA	-59	True	NA	NA	NA	135780704	135777041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ENSMUST00000102538.11	chr2	-	2810	12	FSM	ENSMUSG00000027210.21	ENSMUST00000102538.11	2810	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.227216050694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGTGTTTTTTAATG	NA	False	NA	4	True	AATAAA	-25	NA	115895528	115693544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ENSMUST00000102540.2	chr4	+	1537	10	FSM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_8	10.2318794961967	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATTCTCACAGATGGC	6000	False	NA	11	True	AATAAA	-19	NA	135692475	135695489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ENSMUST00000102541.10	chr4	+	1430	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	18.7712546197637	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGATTCTCACAGATGGC	4562	False	NA	11	True	AATAAA	-19	NA	135691037	135695489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ENSMUST00000102542.10	chr2	-	2734	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_3	18.9670767383907	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTTTGTGTGAATGTC	NA	False	NA	-6	True	NA	NA	NA	114485445	114346900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ENSMUST00000102543.5	chr2	-	4352	34	FSM	ENSMUSG00000040383.17	ENSMUST00000102543.5	4352	34	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	51.8196880872694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAATAAGTTTGATGTG	7871	False	NA	NA	False	AGTAAA	-25	NA	114005758	113935642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_113935843_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ENSMUST00000102544.9	chr4	+	2225	6	FSM	ENSMUSG00000028676.18	ENSMUST00000102544.9	2225	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	626.397190287441	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTC	4321	False	NA	14	True	AATAAA	-21	NA	135583057	135595693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135583603_135585615_135585721_135589084_135589189_135590350_135590514_135590836_135590888_135594436
ENSMUST00000102544.9-0	chr4	+	3366	6	FSM	ENSMUSG00000028676.18	ENSMUST00000102544.9	2225	6	385	-1526	0	0	multi-exon	FALSE	canonical	0	0	junction_2	626.397190287441	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4706	False	NA	23	True	AATAAA	-28	NA	135583442	135597219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135583603_135585615_135585721_135589084_135589189_135590350_135590514_135590836_135590888_135594436
ENSMUST00000102545.8	chr2	-	4958	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_2	47.4803134497789	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAATGTTATTTA	6017	False	NA	-58	True	GATAAA	-18	NA	113679001	113661890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUST00000102549.10	chr4	-	5153	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGGGTCCTGTGTTGCAC	4188	False	NA	-3	True	ATTAAA	-22	NA	135221934	135176202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ENSMUST00000102549.10-0	chr4	-	1877	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	117	3159	0	126	multi-exon	FALSE	canonical	2	39	junction_10	9.94031776933574	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGCCCCCTCTTTGC	4305	False	NA	-26	True	AGTAAA	-13	NA	135221817	135179361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ENSMUST00000102550.10	chr4	-	2025	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	159.506530691797	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGTTCATCTCTGAGT	NA	False	NA	7	True	ATTAAA	-30	NA	134262579	134252860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
ENSMUST00000102555.11	chr2	-	911	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	286	0	0	0	multi-exon	TRUE	canonical	3	201	junction_2	6.37867541108654	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGAGTATTCTTTATAG	NA	False	NA	1	True	TATAAA	-19	NA	105833608	105797053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ENSMUST00000102558.11	chr11	+	4863	31	FSM	ENSMUSG00000020827.19	ENSMUST00000102558.11	3903	31	-189	-771	0	0	multi-exon	TRUE	canonical	3	21	junction_17	21.9476397111145	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGATCCTACTATTGT	1466	False	NA	NA	False	AATAAA	-24	NA	70453706	70505309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ENSMUST00000102559.11	chr11	+	4865	32	FSM	ENSMUSG00000020827.19	ENSMUST00000102559.11	4865	32	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_17	25.4119032798382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATTTTGAGATCCTACT	1483	False	NA	NA	False	AATAAA	-19	NA	70453723	70505304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ENSMUST00000102561.11	chr4	+	1813	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	1317	junction_7	93.1791788706039	1160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCGCCCCTGGCCGTGCT	NA	False	NA	7	True	AGTAAA	-24	NA	132495645	132506063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUST00000102563.2	chr11	+	1352	16	FSM	ENSMUSG00000060216.16	ENSMUST00000102563.2	1352	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	64.7561580083315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAAACTTGGCTTGGTC	NA	False	NA	37	True	AATAAA	-43	NA	70323523	70331649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989_70331102_70331581
ENSMUST00000102564.11	chr11	+	1848	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_13	22.0579015413562	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCTATGCCAGTGTTC	NA	False	NA	8	True	AATAAA	-14	NA	70323478	70331620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUST00000102565.4	chr2	+	3720	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_6	33.1058907144937	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTATTTATTTATTT	NA	False	NA	14	True	NA	NA	NA	103858204	103887849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ENSMUST00000102567.4	chr4	-	1675	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	8.5	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTGATTCTGATTCT	1047	False	NA	-15	True	AATAAA	-13	NA	132191232	132186041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132187425_132190175_132190320_132191084
ENSMUST00000102569.10	chr11	-	778	5	FSM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	164.364495862093	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128740	70126031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356_70128452_70128609
ENSMUST00000102570.5	chr4	-	2536	4	FSM	ENSMUSG00000040025.18	ENSMUST00000102570.5	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	871	junction_2	49.2815043060443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGGAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	131939416	131914060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742
ENSMUST00000102573.8	chr2	-	5612	5	FSM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	8.0156097709407	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTCAGAGTTGTTC	NA	False	NA	0	True	AATAAA	-19	NA	102231245	102130463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_102134850_102177308_102177329_102187761_102188002_102211208_102211287_102230357
ENSMUST00000102574.10	chr11	-	2168	20	FSM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_10	16.9960073525513	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGTGAATGTCACTGCTC	NA	False	NA	4	True	AATAAA	-21	NA	69906234	69901008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ENSMUST00000102576.4	chr4	+	2001	8	FSM	ENSMUSG00000040533.8	ENSMUST00000102576.4	2001	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.36808406515884	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAATTAGTGGTGGTGA	1491	False	NA	NA	False	AATAAA	-32	NA	130671695	130682786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130671841_130673139_130673487_130677245_130677469_130678599_130678726_130679149_130679567_130680143_130680297_130681646_130681728_130682277
ENSMUST00000102578.11	chr5	+	3717	15	FSM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_6	30.6590866112599	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGAGTTTCATTTCTC	846	False	NA	29	True	AGTAAA	-19	NA	114912737	114943883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ENSMUST00000102580.10	chr11	-	1640	9	FSM	ENSMUSG00000018570.18	ENSMUST00000102580.10	1640	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.57647321898295	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGCTGGGAGCTGCG	9726	False	NA	-13	True	AATAAA	-15	NA	69791783	69788188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69788319_69788444_69788581_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ENSMUST00000102581.11	chr5	-	3103	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	16.3401346383682	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCTTCTGGTCTTTTCG	NA	False	NA	2	True	AATAAA	-24	NA	114518569	114501627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ENSMUST00000102584.11	chr5	+	2136	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_3	32.487536071546	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTGTGCCGACTATTCTT	NA	False	NA	21	True	AATAAA	-17	NA	114268986	114277382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUST00000102588.10	chr4	-	1810	9	FSM	ENSMUSG00000053730.16	ENSMUST00000102588.10	1810	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	5.99869777535091	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTGTGTCCTGTGATT	9992	False	NA	NA	False	AAAAAG	-21	NA	129590631	129570147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586858_129587079_129587678_129587806_129590507
ENSMUST00000102590.11	chr4	-	5710	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_4	15.2943505832485	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTCTTTGGTTTGGAG	8834	False	NA	3	True	AATAAA	-22	NA	129566560	129537772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ENSMUST00000102591.10	chr4	+	1437	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	181.287582310538	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3176	False	NA	16	True	AATAAA	-16	NA	129494472	129502321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
ENSMUST00000102593.11	chr4	-	1123	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_10	179.667915889287	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGCAGCCTGTCTGT	6377	False	NA	0	True	AATAAA	-32	NA	129494441	129485752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ENSMUST00000102594.11	chr2	-	1625	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	-62	414	0	0	multi-exon	FALSE	canonical	3	72	junction_5	19.7673974007708	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGAGTCTAAAGCCAG	NA	False	NA	-7	True	AATAAA	-18	NA	91275049	91108588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
ENSMUST00000102597.5	chr4	-	2038	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	0	0	0	0	multi-exon	FALSE	canonical	3	1463	junction_10	202.513203601978	2479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8808	False	NA	-5	True	AATAAA	-22	NA	129436506	129409896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUST00000102598.4	chr4	-	1990	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	0	2417	0	0	multi-exon	TRUE	canonical	3	482	junction_1	226.647613038099	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2492	False	NA	-29	True	AATAAA	-14	NA	129229163	129203309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUST00000102601.10	chr11	+	759	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_2	10.7082522694727	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214888	69216619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
ENSMUST00000102602.8	chr11	+	751	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	97.8682149627753	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTGAGTGTGAGTTC	NA	False	NA	16	True	AATAAA	-25	NA	69214805	69216619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
ENSMUST00000102604.11	chr4	+	1781	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	122.234746833023	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2869	False	NA	29	True	AATAAA	-19	NA	128887016	128905322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ENSMUST00000102606.10	chr11	+	1828	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	4.96865172858795	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTGTCTTATGTTTA	5558	False	NA	6	True	CATAAA	-18	NA	68858956	68863342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
ENSMUST00000102611.10	chr11	+	7791	41	FSM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_6	27.8530855561821	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTTCCGCACCTTCTG	NA	False	NA	11	True	AATAAA	-25	NA	68582740	68707458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ENSMUST00000102617.5	chr4	-	1672	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	41.9218320210365	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7076	False	NA	NA	False	AATAAA	-20	NA	126215496	126209839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
ENSMUST00000102621.11	chr3	-	2419	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_10	22.0233461984726	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGAGTTTTTCTTTCT	NA	False	NA	3	True	AATAAA	-17	NA	108747827	108700491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ENSMUST00000102625.11	chr3	-	1866	12	FSM	ENSMUSG00000068739.14	ENSMUST00000102625.11	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	974.241336537401	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352485	108333927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUST00000102628.11	chr4	+	1634	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	43.7121264639459	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAAATGGTTTATTTTT	1534	False	NA	43	True	ATTAAA	-18	NA	124744471	124749035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
ENSMUST00000102629.8	chr3	+	1687	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	112.452983372553	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGCTCTCAGACATAGG	7052	False	NA	68	True	AATAAA	-16	NA	108291174	108295547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUST00000102632.7	chr3	+	6796	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACTAAGATGAGTAAGCT	4989	False	NA	23	True	AATAAA	-23	NA	108191406	108268827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ENSMUST00000102632.7-1	chr3	+	3326	20	FSM	ENSMUSG00000068747.15	ENSMUST00000102632.7	6796	20	0	3470	0	-3397	multi-exon	FALSE	canonical	3	21	junction_7	9.89893527949294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTTCAGGCTGTACTT	4989	False	NA	NA	False	ATTAAA	-21	NA	108191406	108265357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241881_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
ENSMUST00000102633.9	chr3	-	2596	12	FSM	ENSMUSG00000048997.18	ENSMUST00000102633.9	3044	12	448	0	0	0	multi-exon	FALSE	canonical	3	3	junction_11	14.3354153142281	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	3382	False	NA	NA	False	AAGAAA	-28	NA	108117802	108109537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108116232_108116412_108117660
ENSMUST00000102636.4	chr4	-	3052	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATGCATTGGAATGTG	NA	False	NA	NA	False	AATAAA	-15	NA	123644138	123628351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ENSMUST00000102636.4-0	chr4	-	2134	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	114	804	0	-804	multi-exon	FALSE	canonical	3	473	junction_3	40.3198152277512	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTACCTTGCCTTCTTGA	NA	False	NA	-18	True	AATAAA	-15	NA	123644024	123629155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ENSMUST00000102637.8	chr3	-	3586	19	FSM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_18	33.5369705707258	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGCATGTGAAGGTGT	NA	False	NA	-8	True	AATAAA	-15	NA	107993967	107981379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ENSMUST00000102638.8	chr3	-	3650	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	0	0	0	0	multi-exon	TRUE	canonical	3	198	junction_12	21.7907634157735	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993943	107981377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ENSMUST00000102641.10	chr4	-	1917	7	FSM	ENSMUSG00000032726.13	ENSMUST00000102641.10	1917	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.09569593683445	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAAGAACCAT	NA	False	NA	NA	False	NA	NA	NA	123236596	123206437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123207210_123209636_123209748_123210145_123210226_123210654_123210850_123218353_123218503_123218891_123219082_123236176
ENSMUST00000102642.9	chr2	+	1560	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_3	17.1075032271418	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCAGAAGTCGGACTTCA	NA	False	NA	NA	False	GATAAA	-13	NA	84629171	84640520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ENSMUST00000102645.4	chr2	+	2059	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_3	24.2525771826418	399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGCTGGAGTCTTCCCT	3357	False	NA	12	True	AATAAA	-21	NA	84508745	84518559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUST00000102646.4	chr2	-	783	3	FSM	ENSMUSG00000076437.12	ENSMUST00000102646.4	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	2216	junction_1	111	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTTGTAGTTAAGGTT	369	False	NA	NA	False	AATAAA	-15	NA	84501041	84500038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84500461_84500588_84500735_84500826
ENSMUST00000102647.11	chr2	-	654	4	FSM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	946.216677088287	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGGAGCAAGTTTAAATTT	358	False	NA	-14	True	AATAAA	-19	NA	84501052	84499564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84499742_84500355_84500461_84500588_84500735_84500826
ENSMUST00000102649.4	chr4	+	2074	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	10.336343647538	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATGCTGCATTGTCAAT	NA	False	NA	26	True	AATAAA	-30	NA	122910389	122948742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ENSMUST00000102650.10	chr11	-	3874	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTCTTTGTGCATTTTGT	NA	False	NA	NA	False	TTTAAA	-30	NA	61821078	61762132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ENSMUST00000102650.10-0	chr11	-	3483	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	26	365	0	0	multi-exon	FALSE	canonical	3	123	junction_4	17.9790127081323	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61821052	61762497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ENSMUST00000102656.4	chr4	-	2615	2	FSM	ENSMUSG00000052135.9	ENSMUST00000102656.4	2615	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGCCTTGGGTTAGGA	NA	False	NA	-1	True	AATAAA	-16	NA	120144546	120124275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120126380_120144035
ENSMUST00000102657.10	chr11	+	817	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCCTTCATTTCTTG	NA	False	NA	23	True	AATAAA	-23	NA	61395969	61403757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
ENSMUST00000102657.10-0	chr11	+	758	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	59	0	0	0	multi-exon	FALSE	canonical	3	315	junction_4	19.5739339144917	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCCTTCATTTCTTG	NA	False	NA	23	True	AATAAA	-23	NA	61396028	61403757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
ENSMUST00000102659.2	chr2	-	2720	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_17	13.2907335619941	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTATTTAATTTGGTAG	NA	False	NA	NA	False	AATAAA	-14	NA	77110936	77016898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ENSMUST00000102660.8	chr2	-	8990	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	25.3513715905568	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGAATTTACTCATTACT	NA	False	NA	-10	True	AATAAA	-19	NA	77096112	77010683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019
ENSMUST00000102667.5	chr11	+	3544	1	FSM	ENSMUSG00000049323.9	ENSMUST00000102667.5	3544	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTTTTTCAATGGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	60668349	60671893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60668300_60671900
ENSMUST00000102668.10	chr11	-	3542	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_7	18.3744218184581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTAAGTAGATCTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	60668091	60632716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ENSMUST00000102672.5	chr2	-	2475	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	38.2058568808501	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTTTTGAATTTA	NA	False	NA	1	True	AATAAA	-22	NA	75534985	75505856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
ENSMUST00000102680.8	chr2	-	4032	8	FSM	ENSMUSG00000075284.11	ENSMUST00000102680.8	4032	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	18.1647786574312	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTCAGTGTTCTGTGT	NA	False	NA	NA	False	AATATA	-10	NA	73316107	73260382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73262810_73264373_73264488_73265289_73265503_73267297_73268036_73270320_73270501_73274788_73274919_73278192_73278282_73315966
ENSMUST00000102683.11	chr11	-	4999	15	FSM	ENSMUSG00000000538.19	ENSMUST00000102683.11	4999	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	7.39553091745416	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60243731	60117540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ENSMUST00000102687.4	chr4	-	1566	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	49.3527101586124	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539470	117531877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
ENSMUST00000102688.2	chr11	+	6921	5	FSM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.69966214673719	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGCCTGTGGATGCC	NA	False	NA	NA	False	AATAAA	-22	NA	60066704	60090023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60066788_60075921_60081449_60084764_60084859_60088614_60088665_60088856
ENSMUST00000102689.10	chr2	-	4181	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	141.426561233109	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTGAAAAAGTCTAATTT	2885	False	NA	-12	True	ATTAAA	-25	NA	72810790	72766770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ENSMUST00000102690.9	chr4	-	1842	10	FSM	ENSMUSG00000028677.20	ENSMUST00000102690.9	1842	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	438.770616975417	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9877	False	NA	NA	False	ATTAAA	-14	NA	117145969	117128660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117145719
ENSMUST00000102691.11	chr2	+	2424	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_3	87.0351042683353	1860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8569	False	NA	NA	False	AATAAA	-16	NA	72306502	72317237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUST00000102693.9	chr11	-	961	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	8.67307455417179	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGGTCTCCTTCCCA	NA	False	NA	1	True	AATAAA	-19	NA	59937307	59861439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
ENSMUST00000102694.4	chr3	-	6069	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	-167	0	-167	0	multi-exon	FALSE	canonical	3	82	junction_8	11.5515150521479	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTGTGTGAGGAAGTT	4614	False	NA	-3	True	ATTAAA	-18	NA	101017761	100947547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ENSMUST00000102695.4	chr11	+	1306	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9.12414379544733	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	1719	False	NA	6	True	AATAAA	-16	NA	59738898	59767359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
ENSMUST00000102696.5	chr4	-	860	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	8358	junction_5	1894.95893359197	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	False	NA	-13	True	AATAAA	-30	NA	117013440	117011023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ENSMUST00000102697.10	chr11	-	2860	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	195	382	103	0	multi-exon	FALSE	canonical	3	222	junction_12	22.951034835057	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGAATGTTGAAACACAA	NA	False	NA	-45	True	NA	NA	NA	59700647	59682615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ENSMUST00000102699.8	chr4	+	1654	16	FSM	ENSMUSG00000028687.18	ENSMUST00000102699.8	1654	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	29.5893374188894	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTTGGAGAACTTTCTG	NA	False	NA	26	True	AATAAA	-16	NA	116664919	116676628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116664969_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUST00000102701.5	chr2	+	1703	13	FSM	ENSMUSG00000041966.19	ENSMUST00000102701.5	1703	13	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_11	23.1713124838068	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCTAAGCCTTCTTTCT	NA	False	NA	NA	False	AATACA	-15	NA	70886195	70918988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690
ENSMUST00000102703.2	chr11	-	3890	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACCATTTTCTCTTAT	7184	False	NA	NA	False	AATAAA	-19	NA	58795051	58778978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ENSMUST00000102703.2-0	chr11	-	3048	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	0	842	0	-842	multi-exon	FALSE	canonical	3	42	junction_4	4.94974746830583	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTCTGTCAGAGCACA	7184	False	NA	-2	True	AATAAA	-14	NA	58795051	58779820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ENSMUST00000102704.4	chr4	-	3025	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_11	50.1315225199974	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980856	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ENSMUST00000102705.10	chr4	-	2780	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_18	87.8901706606913	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGGTGTTAGGCATTC	NA	False	NA	4	True	NA	NA	NA	115980882	115954112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ENSMUST00000102711.9	chr11	-	4919	28	FSM	ENSMUSG00000037275.15	ENSMUST00000102711.9	4919	28	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	45.8600782424762	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTCTCGTTCTGTGG	NA	False	NA	-34	True	TATAAA	-12	NA	58059365	58012115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58012611_58013107_58013202_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ENSMUST00000102715.4	chr2	-	3536	18	FSM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	9.06874933675377	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGAGTCTCCTCCATTTCG	NA	False	NA	NA	False	AATAAA	-19	NA	68302612	68040788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ENSMUST00000102715.4-0	chr2	-	1970	18	FSM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	264	1302	-64	0	multi-exon	FALSE	canonical	3	28	junction_11	9.06874933675377	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTGTGAGCACTCC	NA	False	NA	NA	False	NA	NA	NA	68302348	68042090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ENSMUST00000102718.10	chr2	-	4470	29	FSM	ENSMUSG00000034848.18	ENSMUST00000102718.10	4470	29	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_7	6.12653562590721	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTATATTTTTTCAG	NA	False	NA	NA	False	AATAAA	-15	NA	66086961	66014670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_66015188_66016497_66016566_66018603_66018725_66021902_66022128_66028011_66028208_66031466_66031629_66031816_66031968_66037795_66037878_66038997_66039109_66040335_66040525_66047528_66047636_66052997_66053137_66053858_66053970_66054419_66054493_66056249_66056489_66057074_66057297_66059325_66059484_66061632_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
ENSMUST00000102724.5	chr4	+	4468	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	0	0	0	0	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTGAAAAGCCCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	109533784	109821157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ENSMUST00000102724.5-1	chr4	+	2559	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	0	1909	0	-1909	multi-exon	FALSE	canonical	3	1050	junction_10	116.73236245551	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	28	True	AATAAA	-20	NA	109533784	109819248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ENSMUST00000102726.8	chr2	-	5031	14	FSM	ENSMUSG00000034903.19	ENSMUST00000102726.8	5031	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.34999452113725	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTTCCCGTGTAG	NA	False	NA	NA	False	AATAAA	-20	NA	65068970	64918693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_64919902_64926031_64926209_64927976_64929734_64932412_64932511_64933503_64933739_64936058_64936173_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956650_64963922_64964152_64966688_64966891_64981322_64981512_65068706
ENSMUST00000102727.3	chr11	-	2471	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_5	83.6892399827414	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924271	54869933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUST00000102729.10	chr4	+	5190	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_16	21.9326225188771	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137464	109245014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ENSMUST00000102730.9	chr11	-	2787	19	FSM	ENSMUSG00000020400.18	ENSMUST00000102730.9	2787	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	88.3855191759374	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	6847	False	NA	-5	True	CATAAA	-18	NA	54853736	54801612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54843175_54843229_54853658
ENSMUST00000102738.4	chr4	+	1629	1	FSM	ENSMUSG00000073775.5	ENSMUST00000102738.4	1629	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGGTCTCTTGATGTA	NA	False	NA	9	True	AATAAA	-15	NA	108704981	108706610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108705000_108706600
ENSMUST00000102741.8	chr4	-	1033	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102741.8	1033	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	414.71464888523	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGATGCTGTCTGCTCAG	NA	False	NA	NA	False	TATAAA	-13	NA	108690761	108673914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690339
ENSMUST00000102742.11	chr4	-	3141	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTGTGGTTGTTAAA	NA	False	NA	-3	True	ATTAAA	-14	NA	108690811	108671491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUST00000102742.11-0	chr4	-	942	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	50	2149	0	274	multi-exon	FALSE	canonical	3	1008	junction_1	73.428604780426	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTTTTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-17	NA	108690761	108673640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUST00000102743.10	chr11	+	8189	28	FSM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	12.2166092610894	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54413672	54590111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ENSMUST00000102744.4	chr4	+	3014	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_7	60.5103296966724	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5272	False	NA	21	True	NA	NA	NA	108436650	108472030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ENSMUST00000102746.11	chr7	-	2579	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	386.788858543974	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCCCTAGTGGGTTT	NA	False	NA	0	True	AATAAA	-27	NA	33868000	33840112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ENSMUST00000102747.8	chr2	+	3669	11	FSM	ENSMUSG00000026977.18	ENSMUST00000102747.8	2271	11	-160	-1238	0	0	multi-exon	FALSE	canonical	3	14	junction_1	141.271405457722	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAACTTTTTCCTTTTA	NA	False	NA	27	True	AATAAA	-24	NA	60040256	60079555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_60040429_60055113_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ENSMUST00000102748.11	chr2	+	3594	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_5	27.2519112479596	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAACTTTTTCCTTTTA	NA	False	NA	27	True	AATAAA	-24	NA	60040230	60079555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ENSMUST00000102749.11	chr3	+	2699	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	68.4937059524599	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTTAGGATCCTCTGA	NA	False	NA	-2	True	ATTAAA	-11	NA	95341698	95402878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ENSMUST00000102749.11-0	chr3	+	4356	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	16	-1673	0	0	multi-exon	FALSE	canonical	0	0	junction_11	68.4937059524599	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341714	95404551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ENSMUST00000102752.10	chr13	+	5713	5	FSM	ENSMUSG00000007617.19	ENSMUST00000102752.10	5713	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	6.83282518435822	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTAGTATATTGATTTT	NA	False	NA	17	True	ATTAAA	-17	NA	93441002	93496970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447
ENSMUST00000102754.11	chr2	+	4614	22	FSM	ENSMUSG00000026991.21	ENSMUST00000102754.11	4614	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	23.3372202787765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTCTTGCAGTTCT	NA	False	NA	21	True	AATAAA	-21	NA	58991193	59185549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59180837_59180967_59182605_59182680_59184546
ENSMUST00000102758.8	chr11	+	2022	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	0	0	0	0	multi-exon	FALSE	canonical	3	3003	junction_1	192.557742962988	3441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5131	False	NA	30	True	AATAAA	-26	NA	52251686	52280224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ENSMUST00000102759.8	chr2	-	4717	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAATTTGAGAGATG	NA	False	NA	NA	False	TATAAA	-12	NA	52632212	52581675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ENSMUST00000102759.8-0	chr2	-	4170	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	10	537	0	-537	multi-exon	FALSE	canonical	3	181	junction_4	18.080359738789	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTAAATGTGGCTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	52632202	52582212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ENSMUST00000102762.10	chr4	-	5689	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTTCTGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	106657043	106601751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
ENSMUST00000102762.10-0	chr4	-	2734	16	FSM	ENSMUSG00000034853.17	ENSMUST00000102762.10	5689	16	3	2952	0	-116	multi-exon	FALSE	canonical	3	17	junction_9	3.45382235919697	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGGACGTCAGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	106657040	106604703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106605682_106606458_106606586_106607079_106607212_106610023_106610155_106610910_106610995_106611270_106611338_106612502_106612559_106613041_106613187_106615502_106615623_106617277_106617432_106619160_106619297_106619641_106619741_106620590_106620652_106627900_106627971_106628539_106628754_106656880
ENSMUST00000102763.5	chr11	+	1832	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	0	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_1	20	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGGTTCAAGTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51858487	51868161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51858785_51860970_51861071_51866726
ENSMUST00000102767.8	chr2	-	2057	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102767.8	2057	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	2.77263412660235	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGCTGCATCATTATT	NA	False	NA	NA	False	ATTAAA	-1	NA	51825019	51814459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824843
ENSMUST00000102768.8	chr2	-	2106	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102768.8	2106	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.0455931256497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGCTGCATCATTATT	NA	False	NA	NA	False	ATTAAA	-1	NA	51825175	51814459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822532_51824946
ENSMUST00000102769.11	chr2	-	1342	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_7	76.2190720146573	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186729	50169892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ENSMUST00000102774.11	chr11	-	2037	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	263.494104027287	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTGATCCGTACGAGT	NA	False	NA	-14	True	AATAAA	-22	NA	50101654	50090978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUST00000102776.5	chr11	+	1502	9	FSM	ENSMUSG00000020376.18	ENSMUST00000102776.5	1502	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_8	44.3931300991494	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGCCAGCGTGTGTTT	NA	False	NA	24	True	NA	NA	NA	49916174	49995580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_49990072_49990167_49995375
ENSMUST00000102778.8	chr11	+	4447	11	FSM	ENSMUSG00000020366.19	ENSMUST00000102778.8	4447	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	139.897248007243	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATGGTGCCTGTGTACT	NA	False	NA	4	True	NA	NA	NA	49745039	49777238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ENSMUST00000102780.8	chr4	+	4186	6	FSM	ENSMUSG00000028527.19	ENSMUST00000102780.8	4186	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	98.0848612172133	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101276473	101324192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_101276568_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ENSMUST00000102781.10	chr4	-	4906	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_18	17.726657186283	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	NA	False	NA	-7	True	AATAAA	-17	NA	101122479	101009563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ENSMUST00000102782.4	chr1	+	445	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6573	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	156193609	156194054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_156193600_156194100
ENSMUST00000102783.5	chr4	+	2523	11	FSM	ENSMUSG00000025791.19	ENSMUST00000102783.5	2523	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.9264886781093	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTCGCTTTTATTC	NA	False	NA	16	True	ATTAAA	-19	NA	99812940	99844491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99813491_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ENSMUST00000102787.10	chr2	-	4342	22	FSM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	9.9979589753844	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACCGTTTAAGAAAACAT	NA	False	NA	1	True	AATAAA	-18	NA	38177387	37689002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ENSMUST00000102790.4	chr4	-	4795	10	FSM	ENSMUSG00000035407.9	ENSMUST00000102790.4	4795	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	7.99228022593531	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTACGATTTCTTTG	NA	False	NA	-11	True	ATTAAA	-15	NA	98705774	98643134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_98644823_98649639_98649841_98653699_98653843_98659492_98659713_98661619_98661708_98662910_98663130_98665235_98665348_98666500_98668430_98673895_98673979_98705662
ENSMUST00000102794.8	chr2	-	3606	9	FSM	ENSMUSG00000035778.18	ENSMUST00000102794.8	3606	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	26.0836994117016	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35351461	35290194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ENSMUST00000102795.4	chr11	-	2088	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	0	0	0	0	multi-exon	FALSE	canonical	2	61	junction_9	50.7897627480184	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTATCTGTTTTATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	44361325	44345397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ENSMUST00000102798.8	chr4	+	4654	23	FSM	ENSMUSG00000006386.16	ENSMUST00000102798.8	4654	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	3.20027116619671	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCCCAGGATTGTGTCT	281	False	NA	NA	False	AATAAA	-18	NA	94627536	94763176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94699524_94699654_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUST00000102810.10	chr2	-	3578	29	FSM	ENSMUSG00000038860.16	ENSMUST00000102810.10	3578	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	25.2217714505155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTACTGCCTGTTCAC	4914	False	NA	NA	False	TATAAA	-18	NA	32977265	32876235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32977093
ENSMUST00000102811.10	chr2	+	729	7	FSM	ENSMUSG00000038900.18	ENSMUST00000102811.10	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	2477.85254246943	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGGCTTGGCTGCTTTTT	5822	False	NA	22	True	AATAAA	-21	NA	32851751	32854055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32851973_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUST00000102814.5	chr4	-	878	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	14010	junction_1	3685.72343645043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTCATTAATAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	86775649	86772896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ENSMUST00000102815.10	chr11	-	5001	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGGGCTCCCTTCTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	33463746	33161794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ENSMUST00000102815.10-0	chr11	-	3590	28	FSM	ENSMUSG00000040594.20	ENSMUST00000102815.10	5001	28	0	1411	0	-1411	multi-exon	FALSE	canonical	3	105	junction_14	30.62978637606	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463746	33163205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
ENSMUST00000102817.5	chr16	-	1420	3	FSM	ENSMUSG00000047261.10	ENSMUST00000102817.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTGTCTCTGTGTTTC	NA	False	NA	2	True	AATAAA	-17	NA	42161014	42068804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_42069478_42112161_42112730_42160835
ENSMUST00000102818.11	chr2	+	3626	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTCAACCACTTCCTCCA	NA	False	NA	16	True	AATAAA	-18	NA	32477106	32489710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ENSMUST00000102818.11-0	chr2	+	1629	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	0	1997	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.22218803410712	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGTCTCTGTGGTAA	NA	False	NA	7	True	NA	NA	NA	32477106	32487713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ENSMUST00000102821.4	chr11	+	5026	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_8	17.3190824607989	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAAGCACTGTTGTTC	NA	False	NA	1	True	AATAAA	-12	NA	32483304	32574587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
ENSMUST00000102823.10	chr4	-	8831	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	31.1407314036548	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTCTTCTATTTGATG	NA	False	NA	-12	True	AATAAA	-16	NA	83242492	83138536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUST00000102829.4	chr11	+	1438	5	FSM	ENSMUSG00000020299.7	ENSMUST00000102829.4	2000	5	0	562	0	-562	multi-exon	FALSE	canonical	3	12	junction_4	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAATGTGAATTTCCTCCT	2284	False	NA	NA	False	AATATA	-23	NA	31915591	31929089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_31915952_31923555_31923642_31925036_31925136_31926785_31926831_31928241
ENSMUST00000102832.3	chr9	-	1462	8	FSM	ENSMUSG00000032093.8	ENSMUST00000102832.3	1462	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	3.13635691430002	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATGTCTCTTTTCTTCT	4751	False	NA	NA	False	AATAAA	-17	NA	44920911	44910037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44910886_44911732_44911780_44912276_44912445_44913435_44913652_44916809_44916825_44918473_44918492_44920645_44920748_44920863
ENSMUST00000102838.10	chr11	-	9107	31	FSM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_28	71.9392953970375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTGTGGGGTTTTCTC	1820	False	NA	NA	False	CATAAA	-18	NA	30148257	30056784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ENSMUST00000102840.5	chr2	+	1696	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	0	0	0	0	multi-exon	FALSE	canonical	3	2348	junction_1	252.729068811291	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	False	NA	27	True	ATTAAA	-22	NA	31360218	31410684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ENSMUST00000102842.10	chr11	+	2257	8	FSM	ENSMUSG00000020458.17	ENSMUST00000102842.10	2257	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	364.665796116311	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642946	29692916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29643694_29655534_29655592_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUST00000102843.10	chr11	+	4618	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	355.342066711781	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642946	29692916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUST00000102844.4	chr11	-	637	5	FSM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5966.04937856703	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497860	29495845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
ENSMUST00000102845.11	chr11	-	791	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29498109	29495845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ENSMUST00000102845.11-0	chr11	-	573	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	218	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5362.30439270282	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTATTGTGCTTTATTG	NA	False	NA	-31	True	AATAAA	-16	NA	29497891	29495845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ENSMUST00000102848.9	chr4	-	3660	20	FSM	ENSMUSG00000008305.19	ENSMUST00000102848.9	3660	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	75.9211575298008	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119091	72036043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056923_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117659_72118218
ENSMUST00000102852.6	chr2	-	3647	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTGGTCATGATGTC	8411	False	NA	NA	False	NA	NA	NA	30793309	30779482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30782839_30790878_30790962_30793101
ENSMUST00000102852.6-0	chr2	-	1338	3	FSM	ENSMUSG00000050737.14	ENSMUST00000102852.6	3647	3	0	2309	0	502	multi-exon	FALSE	canonical	3	78	junction_1	10.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCGGTGTCTAAGACCCA	8411	False	NA	NA	False	ATTAAA	-22	NA	30793309	30781791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30782839_30790878_30790962_30793101
ENSMUST00000102855.8	chr2	-	4224	15	FSM	ENSMUSG00000026853.16	ENSMUST00000102855.8	4224	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	17.5778153317395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCACACTTGGCTTGT	NA	False	NA	NA	False	AGTAAA	-23	NA	30305783	30290482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323_30305455_30305651
ENSMUST00000102856.9	chr11	+	2410	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	30.8097333552481	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTTATTCTTACTT	NA	False	NA	NA	False	AATAAA	-19	NA	29122889	29159641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
ENSMUST00000102864.5	chr11	-	7466	10	FSM	ENSMUSG00000020275.10	ENSMUST00000102864.5	7466	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.22726233524303	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTTACAGTTTTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	23720970	23686846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23693041_23694238_23694308_23694436_23694506_23695428_23695642_23695745_23695851_23698750_23698892_23703216_23703309_23706898_23707048_23711012_23711156_23720679
ENSMUST00000102865.11	chr2	-	1165	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	34.0917878674616	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983660	29980955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
ENSMUST00000102866.10	chr2	+	2824	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	0	0	0	0	multi-exon	FALSE	canonical	3	11761	junction_1	1825.6496299752	7097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29951864	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUST00000102867.8	chr4	-	4013	12	FSM	ENSMUSG00000039137.19	ENSMUST00000102867.8	4013	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	11.3705433554579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCCAGTGTTCTATGCT	4518	False	NA	-7	True	AATAAA	-18	NA	63414188	63333146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_63333904_63334238_63334362_63334648_63334828_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ENSMUST00000102869.8	chr11	+	6004	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	0	0	0	0	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCAACCAGTGCAAATTC	NA	False	NA	NA	False	AATAAA	-41	NA	23206077	23248249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUST00000102869.8-1	chr11	+	4798	25	FSM	ENSMUSG00000020290.15	ENSMUST00000102869.8	6004	25	-20	1226	0	-574	multi-exon	FALSE	canonical	2	1142	junction_7	252.998761388053	2087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACTTAAAATTATTCCT	NA	False	NA	20	True	AATAAA	-26	NA	23206057	23247023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUST00000102872.11	chr2	+	6402	24	FSM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	42.1435569818812	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGTTACCATAGCAATAG	NA	False	NA	NA	False	ATTAAA	-6	NA	29509781	29630990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ENSMUST00000102874.11	chr11	-	1292	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	116	550	116	-455	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCAGACTCTGTTTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	21521818	21507241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUST00000102875.11	chr11	-	2683	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_9	120.111779214916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTTTAAGTCTGTTT	NA	False	NA	NA	False	AATATA	-18	NA	21320477	21271137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ENSMUST00000102875.11-0	chr11	-	2507	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	-359	535	-359	0	multi-exon	FALSE	canonical	3	61	junction_9	120.111779214916	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21320836	21271672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ENSMUST00000102880.5	chr11	+	2859	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_5	55.0962793662149	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	False	NA	11	True	AATAAA	-15	NA	17109262	17150375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ENSMUST00000102883.11	chr4	-	3409	15	FSM	ENSMUSG00000028382.16	ENSMUST00000102883.11	3409	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_12	53.5489953029857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTGTTAATTATTTC	5	True	NA	-18	True	NA	NA	NA	59549284	59475258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59546148_59546183_59549147
ENSMUST00000102889.10	chr4	-	7045	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_48	23.9024347899725	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAATGTGTGTGTGTCT	-22	True	NA	-3	True	AATAAA	-18	NA	58912749	58798910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ENSMUST00000102889.10-0	chr4	-	5926	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	0	1119	0	-1119	multi-exon	FALSE	canonical	3	80	junction_48	23.9024347899725	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-22	True	NA	-12	True	AATAAA	-19	NA	58912749	58800029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ENSMUST00000102898.5	chr2	+	914	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26800775	26803330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUST00000102898.5-0	chr2	+	861	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	53	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_1	795.089880684786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26800828	26803330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUST00000102899.10	chr2	-	3506	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	2.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTGTCTTTCTTGAT	NA	False	NA	-4	True	AATAAA	-18	NA	26800689	26795273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26798314_26799004_26799086_26800304
ENSMUST00000102903.8	chr4	+	3307	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	1	3342	0	-3342	multi-exon	FALSE	canonical	3	18	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTCTTCATGTTGCAG	-5	True	NA	6	True	TATAAA	-18	NA	57845247	57893640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_57845307_57854561_57857038_57892868
ENSMUST00000102911.10	chr4	+	3102	16	FSM	ENSMUSG00000028412.18	ENSMUST00000102911.10	3102	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_15	93.8563914830643	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCGTTGTCCGTGACTCC	-33	True	NA	NA	False	NA	NA	NA	53440412	53622478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53621594
ENSMUST00000102914.10	chr11	+	3806	19	FSM	ENSMUSG00000041164.16	ENSMUST00000102914.10	3806	19	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	59.8521068247228	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	NA	False	NA	20	True	ATTAAA	-20	NA	6345187	6356074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUST00000102915.10	chr4	+	5404	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	46.9361083164006	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-19	True	NA	21	True	ATTAAA	-21	NA	52439242	52488260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUST00000102919.4	chr2	+	8033	48	FSM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_14	9.25265307651151	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACCTGTGGGAGCCTGTG	NA	False	NA	11	True	AATAAA	-14	NA	25318714	25338552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ENSMUST00000102921.4	chr11	-	590	7	FSM	ENSMUSG00000020469.9	ENSMUST00000102921.4	590	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	30.6671195618731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTGTTGGCTTGACTG	NA	False	NA	2	True	AATAAA	-20	NA	5848782	5846636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5846782_5847125_5847175_5847319_5847399_5847831_5847937_5848159_5848236_5848425_5848540_5848760
ENSMUST00000102922.10	chr11	-	1646	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_10	541.870242770352	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCACTTGGGCATGT	9505	False	NA	2	True	AATAAA	-25	NA	5828292	5822179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ENSMUST00000102923.10	chr11	+	3831	21	FSM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	4.12886182863995	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCCTGTTCTGACTGG	8672	False	NA	8	True	AATAAA	-18	NA	5811946	5822088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ENSMUST00000102925.4	chr2	-	1677	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	67	1605	0	0	multi-exon	FALSE	canonical	3	362	junction_3	36.5288841192829	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTCTGATTGTCTGTCT	NA	False	NA	-20	True	NA	NA	NA	25255627	25251505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ENSMUST00000102926.5	chr4	+	1716	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	0	0	0	0	multi-exon	FALSE	canonical	3	5377	junction_1	313.520688666988	5143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	4	True	NA	8	True	AATAAA	-20	NA	46450901	46472657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ENSMUST00000102927.10	chr17	-	7161	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_7	13.9033008723802	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTGCCATGGAGCCT	NA	False	NA	-3	True	AATAAA	-18	NA	24360569	24292653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ENSMUST00000102928.5	chr11	+	2295	13	FSM	ENSMUSG00000020476.15	ENSMUST00000102928.5	2295	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	84.6740072277201	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATATAACTGATGTCAG	NA	False	NA	-2	True	NA	NA	NA	5738529	5750962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUST00000102929.2	chr4	+	3716	17	FSM	ENSMUSG00000035517.18	ENSMUST00000102929.2	3716	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.54644359843292	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGTCTTAGTTTGCTT	73	False	NA	NA	False	AATAAA	-19	NA	45972232	46034761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656_46026160_46029646_46029808_46034295
ENSMUST00000102930.10	chr11	-	2174	18	FSM	ENSMUSG00000009079.17	ENSMUST00000102930.10	2174	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1623.90424701095	6803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGAGTTTTTTTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5049042	5019896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041459_5041478_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUST00000102934.9	chr4	-	5240	12	FSM	ENSMUSG00000035696.16	ENSMUST00000102934.9	5240	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	22.7367253069995	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGTCGTGTTTCATGTA	-11	True	NA	-5	True	AATAAA	-21	NA	44167951	44126214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167626
ENSMUST00000102935.10	chr2	-	1574	8	FSM	ENSMUSG00000026972.16	ENSMUST00000102935.10	1574	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	27.9642629082191	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGAGTGGCTGGCCT	9406	False	NA	-31	True	AATAAA	-17	NA	24825175	24815363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24815689_24815767_24816207_24816283_24816458_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ENSMUST00000102936.9	chr4	-	2920	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	6.79693659727954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATATCTGGTCCCAGAA	240	False	NA	-6	True	NA	NA	NA	44072778	44036825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
ENSMUST00000102938.10	chr2	-	4680	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_23	33.3131324390158	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAGAAAAA	9613	False	NA	NA	False	AATAAA	-11	NA	24809603	24681168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ENSMUST00000102943.2	chr13	-	1187	1	FSM	ENSMUSG00000076430.2	ENSMUST00000102943.2	1187	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGAAACAATTATTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	31131742	31130555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_31130600_31131700
ENSMUST00000102944.11	chr4	+	1884	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_5	10.0615294563004	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTTACTGGCACA	6408	False	NA	5	True	AATAAA	-14	NA	43562331	43567060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUST00000102946.8	chr13	-	4375	29	FSM	ENSMUSG00000021357.15	ENSMUST00000102946.8	4375	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	37.7812581763466	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	False	NA	-2	True	AATAAA	-20	NA	31134281	30997901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31134162
ENSMUST00000102948.11	chr13	-	5097	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	17.007351351695	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTGGATGGATTTTCT	NA	False	NA	-3	True	AATAAA	-22	NA	30170046	30090557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
ENSMUST00000102955.11	chr3	-	1064	5	FSM	ENSMUSG00000045031.19	ENSMUST00000102955.11	1064	5	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	3.41869858279434	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTATCTTCTGGTAGT	NA	False	NA	NA	False	AATAAA	-21	NA	37366595	37362770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441_37364589_37366505
ENSMUST00000102960.11	chr2	+	5000	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_8	24.7443735759998	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTTTGTTTCTTTTTTC	4682	False	NA	NA	False	TATAAA	-17	NA	14078908	14154445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ENSMUST00000102960.11-0	chr2	+	2896	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	10	2094	0	0	multi-exon	FALSE	canonical	3	181	junction_8	24.7443735759998	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTCTGATTTTGTTT	4692	False	NA	27	True	ATTAAA	-29	NA	14078918	14152351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ENSMUST00000102973.4	chr4	+	3832	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	0	0	0	0	multi-exon	TRUE	canonical	3	234	junction_5	35.2306684580353	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGGCTTTGGAGTTGA	-13	True	NA	9	True	ATTAAA	-17	NA	40143080	40198338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ENSMUST00000102975.10	chr4	-	6030	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTAGTCTGTCGTCTTT	-32	True	NA	NA	False	AATAAA	-16	NA	35157484	34949073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
ENSMUST00000102975.10-0	chr4	-	2398	4	FSM	ENSMUSG00000073910.11	ENSMUST00000102975.10	6030	4	0	3632	0	-3632	multi-exon	FALSE	canonical	3	22	junction_3	2.86744175568088	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAATGTATTCTTACA	-32	True	NA	NA	False	AATAAA	-24	NA	35157484	34952705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34954048_34985915_34986119_35083769_35084390_35157251
ENSMUST00000102978.8	chr13	+	3198	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	13.42236938845	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATCAAATTCAGTTG	NA	False	NA	NA	False	AATAAA	-12	NA	22129281	22144949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ENSMUST00000102980.11	chr6	-	1387	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_4	199.673498924718	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	NA	False	NA	-5	True	AATAAA	-16	NA	34294413	34280868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ENSMUST00000102981.10	chr2	-	2448	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_3	37.3630833845388	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGTGTTCTCTAAGAGT	NA	False	NA	-17	True	AATAAA	-10	NA	5900243	5875797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ENSMUST00000102985.8	chr2	-	4867	20	FSM	ENSMUSG00000026669.15	ENSMUST00000102985.8	4867	20	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_19	167.610417568725	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATGTTTATCTTTTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	5017155	4994524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5016705
ENSMUST00000102988.10	chr2	+	2469	14	FSM	ENSMUSG00000026648.19	ENSMUST00000102988.10	2469	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	4.46419019339905	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAACAGGCTCAAAACCA	1021	False	NA	NA	False	NA	NA	NA	3425186	3455129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
ENSMUST00000102989.10	chr2	+	4368	12	FSM	ENSMUSG00000026643.17	ENSMUST00000102989.10	2162	12	-45	-2161	0	0	multi-exon	TRUE	canonical	3	6	junction_2	78.3416969921083	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTGTTTTCTGTAC	987	False	NA	21	True	AATAAA	-21	NA	3285248	3329914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_3285444_3305848_3305985_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUST00000102993.10	chr6	-	4657	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAACTTGATCTATCA	3	True	NA	-2	True	AATAAA	-22	NA	30304538	30211287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ENSMUST00000102993.10-0	chr6	-	2981	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	0	1676	0	-1676	multi-exon	FALSE	canonical	3	201	junction_3	56.6345497220753	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTGATATTGATGGA	3	True	NA	-1	True	AATAAA	-17	NA	30304538	30212963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ENSMUST00000102994.10	chr4	-	4316	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	22.816024799564	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTATGTTATACAG	-6	True	NA	-15	True	AATAAA	-14	NA	25281821	25248604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ENSMUST00000102995.9	chr6	+	5155	17	FSM	ENSMUSG00000029772.18	ENSMUST00000102995.9	5155	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	15.2883738507403	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATCTGTGTCCTGAGA	-29	True	NA	3	True	AATAAA	-11	NA	29768478	29912303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29768906_29863141_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ENSMUST00000102996.4	chr14	+	2681	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_15	21.4813614300605	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTGCTTCCTTTTGTTC	NA	False	NA	14	True	AATAAA	-14	NA	13803532	14038581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ENSMUST00000102997.8	chr4	+	3365	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_11	80.4513096421711	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTTTCTTTTTAATTT	20	False	NA	NA	False	NA	NA	NA	21727725	21750546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUST00000103002.8	chr12	-	2110	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	0	0	0	0	multi-exon	FALSE	canonical	3	3292	junction_3	152.582764426393	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATGGCTTTGTAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21467437	21440329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
ENSMUST00000103005.10	chrX	+	8264	9	FSM	ENSMUSG00000068270.16	ENSMUST00000103005.10	4839	9	186	-3611	186	0	multi-exon	FALSE	canonical	2	6	junction_3	2.54644359843292	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTCGTCTCTGATG	NA	False	NA	NA	False	AATAAA	-14	NA	6312093	6549502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_6312316_6432846_6432999_6492882_6493018_6495245_6497710_6503009_6503072_6535713_6536491_6541154_6541336_6544276_6544547_6545501
ENSMUST00000103006.4	chrX	-	1775	2	FSM	ENSMUSG00000073293.5	ENSMUST00000103006.4	1775	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGGAGTCCTTATAATTA	NA	False	NA	8	True	NA	NA	NA	6085069	6080749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_6081851_6084395
ENSMUST00000103007.4	chrX	+	3036	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAATAAGATCCTGAA	NA	False	NA	NA	False	AATAAA	-14	NA	5959506	5967164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_5960459_5965080
ENSMUST00000103007.4-0	chrX	+	2388	2	FSM	ENSMUSG00000073295.5	ENSMUST00000103007.4	3036	2	287	361	287	-361	multi-exon	FALSE	canonical	3	23	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTTAGAAGTTACTTG	NA	False	NA	12	True	NA	NA	NA	5959793	5966803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_5960459_5965080
ENSMUST00000103008.12	chr4	+	2086	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	110.946425697271	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	-5	True	NA	13	True	ATTAAA	-18	NA	6365676	6395655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUST00000103009.5	chr4	-	582	3	FSM	ENSMUSG00000028234.7	ENSMUST00000103009.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	6653	junction_2	831.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGCTGGCTTTTGTT	110	False	NA	-40	True	AATAAA	-15	NA	3835488	3834472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_3834684_3834935_3835010_3835191
ENSMUST00000103010.4	chr4	+	3387	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	11.3023473471468	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCATCTTGTCTTACTT	5	True	NA	NA	False	ACTAAA	-17	NA	3678126	3791612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ENSMUST00000103013.10	chr11	+	3906	39	FSM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	67.5521189983218	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCTGCCTATCTC	NA	False	NA	33	True	ATTAAA	-15	NA	121342774	121507990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ENSMUST00000103015.4	chr11	+	3103	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	0	1292	0	-1292	multi-exon	FALSE	canonical	3	80	junction_4	11.0295058819514	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGCATTGAAGGAGTCA	NA	False	NA	NA	False	AATAAA	-20	NA	121128078	121145390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUST00000103016.8	chr11	+	1689	15	FSM	ENSMUSG00000025142.19	ENSMUST00000103016.8	1689	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	257.64954048918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563889	120600270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120563997_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000103027.10	chr11	+	4258	18	FSM	ENSMUSG00000043857.17	ENSMUST00000103027.10	4258	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	10.2666861396781	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGGATTTTTTGTCTT	1808	False	NA	NA	False	AATAAA	-32	NA	116809688	116877774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116865017_116865024_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ENSMUST00000103028.8	chr11	-	3855	19	FSM	ENSMUSG00000020806.16	ENSMUST00000103028.8	3855	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	30.3128237541575	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGCTGCCTTTTGCCTT	NA	False	NA	-19	True	ATTAAA	-15	NA	116517845	116488994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116517556
ENSMUST00000103029.10	chr11	-	3593	19	FSM	ENSMUSG00000020806.16	ENSMUST00000103029.10	3593	19	0	0	0	0	multi-exon	FALSE	canonical	2	65	junction_12	15.7409586041568	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	-15	True	ATTAAA	-19	NA	116515026	116488990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
ENSMUST00000103031.8	chr11	-	5252	30	FSM	ENSMUSG00000020776.19	ENSMUST00000103031.8	5252	30	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_29	8.33099451920079	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTTGGATTTGCAT	NA	False	NA	-9	True	ATTAAA	-18	NA	116058979	116033110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
ENSMUST00000103032.11	chr11	+	3551	26	FSM	ENSMUSG00000020782.19	ENSMUST00000103032.11	3551	26	0	0	0	0	multi-exon	TRUE	canonical	3	630	junction_7	88.2626444199357	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6800	False	NA	40	True	AATAAA	-25	NA	115714874	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
ENSMUST00000103035.10	chr11	+	1764	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	5.67097875150313	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	3736	False	NA	28	True	NA	NA	NA	115310953	115322100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
ENSMUST00000103036.5	chr11	+	749	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	353.082766501	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294582	115301745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUST00000103038.8	chr11	-	1143	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103038.8	1143	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	51.0217818409179	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078158	115073657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077661_115077944
ENSMUST00000103039.2	chr11	-	1158	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103039.2	1158	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	52.6331644498029	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078181	115073657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077955
ENSMUST00000103041.8	chr11	-	953	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103041.8	953	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	52.6331644498029	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCCTTGTTTGTTCACC	NA	False	NA	-5	True	AGTAAA	-16	NA	115078670	115073657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077661_115078646
ENSMUST00000103042.10	chr2	+	1183	10	FSM	ENSMUSG00000059540.16	ENSMUST00000103042.10	1183	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	6.17841723309237	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGGGTCCTGTCCTTCC	2292	False	NA	22	True	ATTAAA	-36	NA	181322102	181329864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
ENSMUST00000103045.4	chr2	-	1136	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGTGGCTTTTCAT	NA	False	NA	-6	True	AATAAA	-16	NA	180956293	180948251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
ENSMUST00000103045.4-0	chr2	-	921	5	FSM	ENSMUSG00000027581.13	ENSMUST00000103045.4	1136	5	215	0	215	0	multi-exon	FALSE	canonical	3	148	junction_1	19.0312243431683	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGTGTGGCTTTTCAT	NA	False	NA	-6	True	AATAAA	-16	NA	180956078	180948251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180948617_180949008_180949201_180950513_180950690_180950939_180951036_180955986
ENSMUST00000103053.10	chr2	-	950	7	FSM	ENSMUSG00000027574.16	ENSMUST00000103053.10	950	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	10.8576649832682	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATTCGCATCCCTGGT	NA	False	NA	NA	False	NA	NA	NA	180596492	180576564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180576823_180577735_180577821_180578943_180579005_180584822_180585021_180585533_180585615_180585869_180586008_180596363
ENSMUST00000103055.8	chr2	-	4613	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_5	13.3626344707921	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTATCCTTCTGTGT	NA	False	NA	-7	True	TTTAAA	-31	NA	180351792	180322850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ENSMUST00000103060.10	chr11	-	2050	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_5	23.2491039253846	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGAGTTGTTTACATTT	NA	False	NA	-6	True	AATAAA	-15	NA	109502258	109464156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUST00000103061.3	chr11	+	1832	8	FSM	ENSMUSG00000020610.18	ENSMUST00000103061.3	1832	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	12.4638252063927	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTGGCCCTAGGAAT	NA	False	NA	19	True	AATAAA	-15	NA	109317051	109327815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUST00000103064.10	chr11	-	6329	10	FSM	ENSMUSG00000040430.19	ENSMUST00000103064.10	6329	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	23.9495354216649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGAGTGTAGCATCCTCT	NA	False	NA	-1	True	AATAAA	-17	NA	107361525	107098717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107211618_107211627_107212412_107212502_107228237_107228387_107360716
ENSMUST00000103067.10	chr11	-	5290	18	FSM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_17	11.382314941417	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACTGAGTTTTTACT	NA	False	NA	-6	True	AATAAA	-39	NA	106811541	106710891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106811006
ENSMUST00000103069.10	chr11	-	3233	14	FSM	ENSMUSG00000020717.20	ENSMUST00000103069.10	3233	14	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_1	285.979785771342	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	9553	False	NA	-9	True	AATAAA	-19	NA	106606091	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844
ENSMUST00000103072.10	chr11	-	2045	11	FSM	ENSMUSG00000069631.15	ENSMUST00000103072.10	1517	11	-10	-518	0	0	multi-exon	TRUE	canonical	3	87	junction_9	16.6340013225922	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGAATGGCACCAGTG	NA	False	NA	-13	True	ATTAAA	-13	NA	106084398	106054155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
ENSMUST00000103074.2	chr2	-	3741	4	FSM	ENSMUSG00000027547.18	ENSMUST00000103074.2	3741	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	261.72037665332	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168609121	168590251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168592381_168594373_168594661_168597685_168598721_168608831
ENSMUST00000103075.11	chr11	-	3766	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_14	21.9246436687122	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844882	103712607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ENSMUST00000103077.2	chr11	-	3023	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	6.65168384389875	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTACCTTTCCACT	9409	False	NA	NA	False	AGTAAA	-2	NA	102992484	102961129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
ENSMUST00000103079.4	chr7	-	3286	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	258.149054338875	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024746	143989471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUST00000103084.4	chr2	-	5033	5	FSM	ENSMUSG00000017667.10	ENSMUST00000103084.4	8205	5	0	3172	0	-3172	multi-exon	FALSE	canonical	3	23	junction_1	3.24037034920393	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGTGAGACTTTTA	4540	False	NA	-3	True	ATTAAA	-14	NA	165230179	165219355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165223807_165224610_165224704_165225158_165225286_165228845_165228909_165229880
ENSMUST00000103094.11	chr2	-	1152	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_4	26.9250812440743	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8166	False	NA	-1	True	AATAAA	-19	NA	164646802	164634687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ENSMUST00000103098.9	chr11	+	4654	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103098.9	4654	24	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_17	38.3552196362625	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	774	False	NA	21	True	AATAAA	-24	NA	101443479	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ENSMUST00000103099.8	chr11	+	4789	24	FSM	ENSMUSG00000017119.21	ENSMUST00000103099.8	4789	24	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	55.4078195296328	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	269	False	NA	21	True	AATAAA	-24	NA	101442974	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ENSMUST00000103107.5	chr11	+	2335	7	FSM	ENSMUSG00000078653.5	ENSMUST00000103107.5	2335	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	3.09120616516523	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGTATTGTAAACATG	NA	False	NA	9	True	AATAAA	-14	NA	101169921	101179527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101170307_101174217_101174294_101174546_101174719_101175585_101175749_101176490_101176636_101177679_101177777_101178230
ENSMUST00000103114.8	chr11	-	4405	24	FSM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	-75	1712	0	0	multi-exon	FALSE	canonical	3	67	junction_2	102.13864331127	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830305	100777635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100779587_100780303_100780367_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUST00000103118.4	chr11	-	3046	18	FSM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	104.829867108865	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6779	False	NA	-1	True	AATAAA	-18	NA	100603291	100595571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUST00000103119.10	chr11	-	2766	8	FSM	ENSMUSG00000014198.16	ENSMUST00000103119.10	2766	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.03015750727543	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGGTGCCCAGACTC	4067	False	NA	NA	False	AATAAA	-17	NA	100541519	100518368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100519895_100520363_100520475_100520716_100520914_100521313_100521626_100523519_100523686_100525472_100525584_100528569_100528716_100541322
ENSMUST00000103120.5	chr11	+	2357	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	8.2192186706253	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCTATCACTCTTG	NA	False	NA	19	True	AATAAA	-15	NA	100465729	100472554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
ENSMUST00000103122.10	chr2	-	3596	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_8	19.1534374634598	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGCCTTGTCCTTT	8806	False	NA	NA	False	AATAAA	-22	NA	157988356	157958321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
ENSMUST00000103123.10	chr2	+	4504	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCCCAGCTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	157870416	157920127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
ENSMUST00000103123.10-0	chr2	+	3606	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	11	887	0	-887	multi-exon	FALSE	canonical	3	106	junction_3	28.7807806241133	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870427	157919240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
ENSMUST00000103124.11	chr11	-	2120	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCAACCCCGCAGCAGC	2048	False	NA	NA	False	NA	NA	NA	100246913	100239684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ENSMUST00000103124.11-0	chr11	-	3693	11	FSM	ENSMUSG00000006930.16	ENSMUST00000103124.11	2120	11	-41	-1532	0	0	multi-exon	FALSE	canonical	3	486	junction_1	44.9070150421958	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ENSMUST00000103129.9	chr2	-	2080	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_10	28.450131809888	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTATGTGACAGTGTGT	8134	False	NA	-6	True	AATAAA	-30	NA	156848995	156837184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ENSMUST00000103130.8	chr2	-	2636	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103130.8	2636	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	60.8885046622103	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGAAGTGTACACTAT	8055	False	NA	-18	True	AATAAA	-18	NA	156849074	156837196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
ENSMUST00000103133.4	chr11	-	2919	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	False	NA	-2	True	AATAAA	-15	NA	99121843	99099872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ENSMUST00000103133.4-1	chr11	-	1974	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	0	945	0	0	multi-exon	FALSE	canonical	3	598	junction_2	51.2922021363872	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTCTGTGTATTAA	NA	False	NA	-1	True	AATGAA	-36	NA	99121843	99100817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ENSMUST00000103140.5	chr2	-	3091	19	FSM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	88.2006865682525	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATTAAAGAACTTTATT	NA	False	NA	-30	True	AATAAA	-14	NA	155534252	155476227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ENSMUST00000103143.10	chr11	-	2448	15	FSM	ENSMUSG00000020883.19	ENSMUST00000103143.10	8601	15	6	6147	0	2388	multi-exon	TRUE	canonical	3	137	junction_5	8.14567620374923	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACCATCAGGGGACCC	3171	False	NA	-15	True	AATAAA	-17	NA	98040432	97979528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ENSMUST00000103145.11	chr2	-	2732	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGTTTGTGTCGAAT	9502	False	NA	-3	True	AGTAAA	-14	NA	154411812	154401326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ENSMUST00000103145.11-0	chr2	-	2072	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	0	660	0	-433	multi-exon	FALSE	canonical	0	0	junction_3	374.662255312108	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAATGGAGCGTTTATT	9502	False	NA	-7	True	NA	NA	NA	154411812	154401986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ENSMUST00000103146.5	chr11	-	1059	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	0	0	0	0	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGTGAGTGCTTGAGA	NA	False	NA	-9	True	AATAAA	-17	NA	97673263	97668352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
ENSMUST00000103146.5-0	chr11	-	493	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	55	511	0	0	multi-exon	FALSE	canonical	3	11120	junction_4	1307.0006455622	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTGGTCTTCTTGAC	NA	False	NA	-35	True	ATTAAA	-11	NA	97673208	97668863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
ENSMUST00000103147.5	chr11	+	766	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	0	0	0	0	multi-exon	FALSE	canonical	3	3867	junction_2	170.920566345891	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	False	NA	22	True	AATAAA	-15	NA	97594224	97604326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ENSMUST00000103148.8	chr11	-	1438	11	FSM	ENSMUSG00000018537.17	ENSMUST00000103148.8	1438	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	75.0416550990182	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	False	NA	8	True	NA	NA	NA	97590467	97580645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590031_97590127_97590361
ENSMUST00000103152.11	chr11	-	2250	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCACCTTTACTGGCT	NA	False	NA	-13	True	GATAAA	-16	NA	96807322	96798251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUST00000103152.11-0	chr11	-	1793	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	67	390	0	0	multi-exon	FALSE	canonical	3	831	junction_13	105.723262738262	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUST00000103159.10	chr11	-	3248	13	FSM	ENSMUSG00000038909.17	ENSMUST00000103159.10	3248	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	285.686052920568	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201027	95165084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95196874_95197023_95200860
ENSMUST00000103168.10	chr11	+	6840	26	FSM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	14.9277727742621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAAGTCTAGTGTGGT	NA	False	NA	9	True	TATAAA	-16	NA	93935093	94016911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ENSMUST00000103172.4	chr2	+	1911	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	0	0	0	0	multi-exon	FALSE	canonical	3	1386	junction_2	119.658774112984	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCTTTGTGTGGTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	143757239	143785244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ENSMUST00000103175.8	chr4	+	1309	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	275.8918870379	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	757	False	NA	34	True	TATAAA	-16	NA	156028287	156042168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUST00000103176.10	chr4	-	3642	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_12	57.2103817307469	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ENSMUST00000103178.11	chr4	-	4083	15	FSM	ENSMUSG00000029053.17	ENSMUST00000103178.11	4083	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	50.8262847795291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAATGCCCTTCCTGTT	NA	False	NA	-11	True	ATTAAA	-8	NA	155430229	155344585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155429906
ENSMUST00000103179.10	chr11	+	5753	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGGTCTTTTTATTT	NA	False	NA	20	True	AATAAA	-20	NA	87482987	87507128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ENSMUST00000103179.10-0	chr11	+	4566	19	FSM	ENSMUSG00000018401.18	ENSMUST00000103179.10	5753	19	57	1130	0	0	multi-exon	FALSE	canonical	3	45	junction_1	26.7350973833791	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCACTTCCCCCATGT	NA	False	NA	3	True	AATAAA	-16	NA	87483044	87505998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87483077_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ENSMUST00000103180.4	chr4	+	1688	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	7.62627038597505	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCCGGGCGTGGTGGC	NA	False	NA	NA	False	TTTAAA	-9	NA	155151472	155156890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ENSMUST00000103181.11	chr2	+	1635	13	FSM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	93	6668	0	54	multi-exon	FALSE	canonical	2	258	junction_5	60.9331942923286	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCACCGTCATTTTTTTT	5337	False	NA	9	True	AATGAA	-11	NA	132105160	132147302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ENSMUST00000103186.11	chr11	-	6519	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	0	0	0	0	multi-exon	TRUE	canonical	3	813	junction_25	122.673691341487	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGTATTTCTTTTCAA	NA	False	NA	0	True	AATAAA	-18	NA	86648391	86585176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ENSMUST00000103186.11-0	chr11	-	6151	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	64	304	0	0	multi-exon	FALSE	canonical	3	813	junction_25	122.673691341487	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTAGAATTGCAGTTT	NA	False	NA	-7	True	AATAAA	-19	NA	86648327	86585480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ENSMUST00000103188.10	chr2	-	1241	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	33.1336686770421	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCAGAGGTTAGCGGG	NA	False	NA	-15	True	AATAAA	-14	NA	131001940	130988244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ENSMUST00000103191.11	chr4	+	474	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	0	0	0	0	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTGGTTTATCCTTGCAT	NA	False	NA	16	True	AATAAA	-15	NA	152410309	152416937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000103193.5	chr2	+	1390	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_5	87.1842992792643	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCTGTCTTGAGTTT	5235	False	NA	18	True	AATAAA	-18	NA	130509529	130523534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ENSMUST00000103195.5	chr11	-	998	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_2	22.0609949911603	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTTCCCTTAGTAAAC	NA	False	NA	69	True	AATAAA	-16	NA	84807192	84801775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
ENSMUST00000103198.11	chr2	+	1877	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	0	0	0	0	multi-exon	FALSE	canonical	3	1876	junction_9	231.115011975273	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116349	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUST00000103199.9	chr2	-	1161	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	0	0	0	0	multi-exon	FALSE	canonical	3	3295	junction_4	264.518850409989	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCATTTGTCTTCTGA	NA	False	NA	-11	True	AATAAA	-28	NA	130021323	130013554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
ENSMUST00000103202.10	chr2	+	3982	8	FSM	ENSMUSG00000037902.19	ENSMUST00000103202.10	3982	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	10.6215030259663	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129435124	129474148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ENSMUST00000103205.11	chr2	+	3998	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_10	36.5564282853179	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942914	128968514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ENSMUST00000103208.2	chr4	-	3620	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_5	21.9508541975022	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCGTCTTTTTTTCTTTC	NA	False	NA	-8	True	AATAAA	-39	NA	149822501	149809320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ENSMUST00000103212.10	chr4	-	5626	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	0	0	0	0	multi-exon	TRUE	canonical	3	203	junction_22	27.7325828917206	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTGAGTCGTCTTT	NA	False	NA	-2	True	AATAAA	-23	NA	149511206	149412872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ENSMUST00000103213.10	chr11	-	1783	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	0	0	0	0	multi-exon	TRUE	canonical	3	193	junction_4	34.6180548590215	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCAGCTTCTTGTTCTA	8303	False	NA	-6	True	AATAAA	-22	NA	82799237	82791593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ENSMUST00000103216.10	chr4	+	1835	5	FSM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2.34520787991171	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	149188602	149203327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228
ENSMUST00000103217.11	chr4	-	2006	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_6	18.1757909043871	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	False	NA	-12	True	AATAAA	-20	NA	149184333	149044991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ENSMUST00000103220.4	chr2	+	6745	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_16	102.022451345341	1008	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCCTTAACAGTGATAC	NA	False	NA	15	True	AATAAA	-17	NA	127050318	127082371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ENSMUST00000103221.10	chr4	+	8564	58	FSM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	0	0	0	0	multi-exon	TRUE	canonical	2	74	junction_19	24.6853638803358	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTATGACTGGCTT	NA	False	NA	34	True	AATAAA	-23	NA	148533067	148642140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ENSMUST00000103224.10	chr2	-	7107	39	FSM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_33	52.8048791605273	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTAATGAGTTTACTC	NA	False	NA	-16	True	ATTAAA	-35	NA	126718150	126633484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ENSMUST00000103225.11	chr11	-	1384	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	19	3151	0	335	multi-exon	FALSE	canonical	2	53	junction_6	17.0105268787113	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATGTCTTCACCAGGTC	NA	False	NA	-18	True	ATTAAA	-13	NA	80268841	80254469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ENSMUST00000103226.10	chr2	-	1338	8	FSM	ENSMUSG00000027361.16	ENSMUST00000103226.10	1338	8	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_7	27.2074419591255	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTGAATGAGTGCAGA	NA	False	NA	-17	True	NA	NA	NA	126517406	126480940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUST00000103227.8	chr2	-	2751	10	FSM	ENSMUSG00000027361.16	ENSMUST00000103227.8	2751	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	168.845754725693	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTCCATGCAGACTCAT	NA	False	NA	-12	True	ATTAAA	-12	NA	126517464	126470834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
ENSMUST00000103232.2	chr4	+	2731	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	12.5	1102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTGGTCTGTGTGTGG	NA	False	NA	21	True	AATAAA	-16	NA	148025351	148031771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148026515_148029064_148029919_148031057
ENSMUST00000103233.10	chr11	-	2230	7	FSM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	206.037820152838	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTGGTTTTTTGT	4541	False	NA	-3	True	AATAAA	-20	NA	79971764	79937318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_79938564_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ENSMUST00000103242.5	chr11	-	1375	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	0	0	0	0	multi-exon	TRUE	canonical	3	1037	junction_2	9	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTGTTGTGTGGAT	NA	False	NA	-7	True	AATAAA	-23	NA	78441603	78432642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78433623_78434311_78434457_78441353
ENSMUST00000103558.3	chr13	+	924	3	FSM	ENSMUSG00000076749.3	ENSMUST00000103558.3	924	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTATTTTTGTCAGTC	2269	False	NA	NA	False	AATATA	-15	NA	19398272	19401194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_19398603_19400033_19400079_19400645
ENSMUST00000104106.3	chrX	+	83	1	FSM	ENSMUSG00000077294.3	ENSMUST00000104106.3	83	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGCCAGAAGCTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	92208507	92208590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_92208500_92208600
ENSMUST00000104203.3	chr19	-	146	1	FSM	ENSMUSG00000077391.3	ENSMUST00000104203.3	146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCTCTCATAAGTTTAA	4906	False	NA	-109	True	NA	NA	NA	44102563	44102417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44102400_44102600
ENSMUST00000104339.3	chr8	+	70	1	FSM	ENSMUSG00000077527.3	ENSMUST00000104339.3	70	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACACCCTCCCTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	85776835	85776905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85776800_85776900
ENSMUST00000104516.3	chr1	-	110	1	FSM	ENSMUSG00000077704.3	ENSMUST00000104516.3	110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCAGGGCAGAGGCTTC	NA	False	NA	36	True	NA	NA	NA	39587935	39587825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_39587800_39587900
ENSMUST00000104526.3	chr2	-	238	1	FSM	ENSMUSG00000077714.3	ENSMUST00000104526.3	238	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAGCCCTTCTAGTT	NA	False	NA	NA	False	NA	NA	NA	144108136	144107898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_144107900_144108100
ENSMUST00000104916.4	chr19	+	571	1	FSM	ENSMUSG00000044424.5	ENSMUST00000104916.4	571	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAATGACTGAATAAAG	NA	False	NA	NA	False	NA	NA	NA	23597112	23597683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_23597100_23597700
ENSMUST00000104922.2	chrX	-	1035	1	FSM	ENSMUSG00000078123.4	ENSMUST00000104922.2	1035	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCATTGGTGATAGCTA	NA	False	NA	NA	False	NA	NA	NA	90976586	90975551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_90975600_90976600
ENSMUST00000104925.5	chr14	+	468	1	FSM	ENSMUSG00000078126.5	ENSMUST00000104925.5	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGAGTCCAGATGGCT	2274	False	NA	NA	False	NA	NA	NA	33892611	33893079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_33892600_33893100
ENSMUST00000104933.2	chr11	-	1311	1	FSM	ENSMUSG00000078134.2	ENSMUST00000104933.2	1311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	794	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAGAAAGGA	NA	False	NA	NA	False	ATTAAA	-32	NA	98516487	98515176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98515200_98516500
ENSMUST00000104941.4	chr13	+	402	1	FSM	ENSMUSG00000069306.6	ENSMUST00000104941.4	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAATCCTCCAAAGGGT	NA	False	NA	NA	False	ACTAAA	-20	NA	21995915	21996317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21995900_21996300
ENSMUST00000104942.2	chr13	+	1924	1	FSM	ENSMUSG00000078139.4	ENSMUST00000104942.2	1924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAGAATTTGAAGTAG	NA	False	NA	NA	False	TTTAAA	-27	NA	21679392	21681316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21679400_21681300
ENSMUST00000104954.9	chr2	-	1702	4	FSM	ENSMUSG00000035399.13	ENSMUST00000104954.9	1702	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	178.417114276256	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACCCCTGCTGGTGCT	NA	False	NA	-35	True	NA	NA	NA	163266617	163247772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163266387
ENSMUST00000104958.2	chr11	-	837	1	FSM	ENSMUSG00000078153.4	ENSMUST00000104958.2	837	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAATAC	1535	False	NA	NA	False	AATAAA	-22	NA	48837017	48836180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_48836200_48837000
ENSMUST00000104959.2	chr11	-	1310	1	FSM	ENSMUSG00000078154.4	ENSMUST00000104959.2	1310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	802	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGTGTAAGAAGGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	48717482	48716172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_48716200_48717500
ENSMUST00000104984.4	chr1	-	6905	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGCTCAATTGATGAA	NA	False	NA	3	True	AATAAA	-17	NA	175520196	175509802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_175516247_175519735
ENSMUST00000104998.5	chr2	+	854	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCTCTGAATTGCCAG	NA	False	NA	6	True	ATTAAA	-16	NA	25145450	25146304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25145400_25146300
ENSMUST00000104999.4	chr2	+	2582	1	FSM	ENSMUSG00000078202.4	ENSMUST00000104999.4	2582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTTTTAATTTTGGCA	7951	False	NA	NA	False	AATAAA	-33	NA	25070769	25073351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25070800_25073400
ENSMUST00000105004.2	chrX	-	856	1	FSM	ENSMUSG00000078206.2	ENSMUST00000105004.2	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCAAGTTGATGTTTAAA	NA	False	NA	NA	False	AATAAA	-31	NA	8852994	8852138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8852100_8853000
ENSMUST00000105006.2	chrX	-	842	1	FSM	ENSMUSG00000078208.2	ENSMUST00000105006.2	842	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCAAGTTGATGTTTAAA	NA	False	NA	NA	False	AATAAA	-31	NA	8829214	8828372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8828400_8829200
ENSMUST00000105032.4	chr4	-	2437	1	FSM	ENSMUSG00000078235.4	ENSMUST00000105032.4	2437	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTCCTGTGTTGTGTTT	NA	False	NA	NA	False	AATAAA	-26	NA	138123839	138121402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138121400_138123800
ENSMUST00000105046.4	chr11	+	1626	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2832	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTACAAGAGTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	120653619	120655245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120653600_120655200
ENSMUST00000105106.2	chr13	-	461	1	FSM	ENSMUSG00000069268.5	ENSMUST00000105106.2	461	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACACCGAATACTGTTTA	5838	False	NA	NA	False	AAAAAG	-12	NA	23758370	23757909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_23757900_23758400
ENSMUST00000105169.6	chr12	+	614	1	FSM	ENSMUSG00000078377.6	ENSMUST00000105169.6	614	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACGTGATATTTGTAAAAT	NA	False	NA	NA	False	NA	NA	NA	12073045	12073659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_12073000_12073700
ENSMUST00000105229.9	chr10	+	1043	8	FSM	ENSMUSG00000025351.15	ENSMUST00000105229.9	1043	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1345.38160886396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	False	NA	35	True	ATTAAA	-27	NA	128744688	128748691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128744922_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000105230.4	chr10	+	918	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	0	0	0	0	multi-exon	FALSE	canonical	3	1529	junction_8	1099.33345259753	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAAATGTGTTTT	NA	False	NA	NA	False	AATAAA	-6	NA	128657762	128713486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUST00000105235.10	chr10	+	4032	28	FSM	ENSMUSG00000025369.16	ENSMUST00000105235.10	4032	28	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_27	21.277769719239	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTTTTAATTATTATT	2694	False	NA	NA	False	AAAAAG	-24	NA	128295189	128325225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128324229_128324764
ENSMUST00000105238.10	chr10	+	4397	24	FSM	ENSMUSG00000040033.17	ENSMUST00000105238.10	4397	24	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	16.4593788801125	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACTGTGAGAGTGTG	2378	False	NA	NA	False	AATAAA	-20	NA	128106444	128128718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117578_128117970_128117989_128118580_128118675_128118981_128119027_128119098_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ENSMUST00000105242.8	chr10	+	4385	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105242.8	4385	29	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_23	64.9742001387741	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTTGTTGTCTTCCTCC	6660	False	NA	20	True	AATAAA	-20	NA	128068002	128088810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ENSMUST00000105244.8	chr10	+	4341	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_28	54.1443059549842	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAAAGAGTCATATAGC	6615	False	NA	-69	True	NA	NA	NA	128067957	128088721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ENSMUST00000105249.9	chr10	+	3654	22	FSM	ENSMUSG00000025404.16	ENSMUST00000105249.9	3654	22	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_8	24.169000591029	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCTGTTTGTTTCACTGT	5190	False	NA	21	True	TATAAA	-37	NA	127280179	127335253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ENSMUST00000105251.9	chr10	+	3739	23	FSM	ENSMUSG00000025404.16	ENSMUST00000105251.9	3739	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	60.2590825087255	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACTGGCCATCAGTC	5190	False	NA	4	True	TATAAA	-20	NA	127280179	127335236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ENSMUST00000105255.3	chr10	+	4136	3	FSM	ENSMUSG00000078429.10	ENSMUST00000105255.3	4136	3	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	8	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGAGCTGCTTTTGCTT	NA	False	NA	19	True	AATAAA	-25	NA	126831481	126835844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126831817_126831894_126832081_126832229
ENSMUST00000105256.10	chr10	+	4817	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	56.6705480863575	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814585	126835838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ENSMUST00000105263.9	chr10	-	3145	12	FSM	ENSMUSG00000020184.16	ENSMUST00000105263.9	3145	12	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_9	142.979973168527	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTCAGTGATTTTG	NA	False	NA	1	True	AATAAA	-41	NA	117546663	117524779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545558_117545690_117545850_117545934_117546456
ENSMUST00000105265.8	chr10	-	2268	14	FSM	ENSMUSG00000020166.16	ENSMUST00000105265.8	2268	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	150.969411847597	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAATGTGTATATATTATA	NA	False	NA	-9	True	AATAAA	-12	NA	116417406	116321413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116384937_116385081_116417357
ENSMUST00000105267.8	chr10	-	2800	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_15	67.9643697503005	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417405	116321070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ENSMUST00000105275.9	chr10	+	7204	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	11.7407406303097	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCCAGTGACTCTT	NA	False	NA	7	True	AATAAA	-18	NA	111000612	111133110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ENSMUST00000105283.9	chr10	+	5648	10	FSM	ENSMUSG00000019966.19	ENSMUST00000105283.9	5648	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	4.46661138716484	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCTCTCATTTGATGC	NA	False	NA	NA	False	AATAAA	-23	NA	99851491	99936278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_99851898_99887707_99887822_99899945_99900009_99912596_99912768_99915835_99915993_99916718_99916803_99923208_99923319_99924014_99924083_99925057_99925134_99931879
ENSMUST00000105290.9	chr10	+	3732	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	6	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTTCTGTATCCTGTC	NA	False	NA	NA	False	ATTAAA	-15	NA	93983884	94033073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ENSMUST00000105290.9-0	chr10	+	2286	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	-84	1530	-84	0	multi-exon	FALSE	canonical	3	23	junction_4	6	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTGCGTTCTCTTCCT	NA	False	NA	0	True	AATAAA	-16	NA	93983800	94031543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ENSMUST00000105293.11	chr10	-	1842	6	FSM	ENSMUSG00000019961.18	ENSMUST00000105293.11	1842	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	321.134862635622	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTACTTCATTAAAACCAT	NA	False	NA	NA	False	NA	NA	NA	91007414	90984766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90985621_90987570_90987660_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUST00000105293.11-0	chr10	-	3202	6	FSM	ENSMUSG00000019961.18	ENSMUST00000105293.11	1842	6	-26	-1334	0	0	multi-exon	FALSE	canonical	3	37	junction_2	321.134862635622	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTGTTGAATACATG	NA	False	NA	-2	True	AATAAA	-15	NA	91007440	90983432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90985621_90987570_90987660_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUST00000105298.3	chr10	-	6305	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTTGCTTTTTTAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	89279829	89245124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ENSMUST00000105298.3-0	chr10	-	3276	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	13	3016	0	180	multi-exon	FALSE	canonical	3	41	junction_2	9.03382532485547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGGTTTTAATGATCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	89279816	89248140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ENSMUST00000105306.3	chr10	+	3945	15	FSM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.689582743498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85434264	85496156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85434442_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUST00000105307.8	chr10	+	5788	17	FSM	ENSMUSG00000020042.16	ENSMUST00000105307.8	5788	17	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	8.15379512865022	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85222677	85496156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUST00000105313.2	chr10	+	1893	2	FSM	ENSMUSG00000061371.8	ENSMUST00000105313.2	1893	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAGATGAATGGCATGG	NA	False	NA	NA	False	NA	NA	NA	81894250	81897163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81894331_81895350
ENSMUST00000105315.3	chr10	+	1497	3	FSM	ENSMUSG00000096856.8	ENSMUST00000105315.3	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGAAGTTTTGGCACAT	NA	False	NA	NA	False	NA	NA	NA	81497831	81500065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81497959_81498158_81498220_81498756
ENSMUST00000105323.8	chr10	-	1463	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_9	133.860992944542	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186314	81181881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
ENSMUST00000105324.9	chr10	-	1540	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105324.9	1540	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	161.527966465926	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	False	NA	-11	True	AATAAA	-17	NA	81186260	81181884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
ENSMUST00000105325.4	chr10	+	1765	3	FSM	ENSMUSG00000034881.9	ENSMUST00000105325.4	1765	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGGAGCACTCCCCTA	3846	False	NA	NA	False	AATAAA	-15	NA	81164564	81171006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81164752_81168225_81169090_81170292
ENSMUST00000105327.10	chr10	+	4262	18	FSM	ENSMUSG00000034902.18	ENSMUST00000105327.10	2551	18	8	-1719	0	0	multi-exon	FALSE	canonical	3	84	junction_16	35.5956725335284	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCTCCGGTGACTTA	5000	False	NA	NA	False	AATAAA	-16	NA	81128821	81155807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ENSMUST00000105331.8	chr10	+	1556	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_7	62.3128397683816	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1132	False	NA	13	True	NA	NA	NA	80941780	80959717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUST00000105336.9	chr10	+	6808	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	16.1546877685662	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1655	False	NA	16	True	AATAAA	-20	NA	80591039	80631295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ENSMUST00000105340.8	chr10	-	2826	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105340.8	2826	19	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	298.052904616978	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCTCATGTCTGTT	NA	False	NA	29	True	NA	NA	NA	80269469	80245459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80246231_80246456_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUST00000105341.8	chr10	-	2451	18	FSM	ENSMUSG00000020167.15	ENSMUST00000105341.8	2451	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	320.073661504547	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCATGTCTGTTTCTGTT	NA	False	NA	-26	True	TATAAA	-2	NA	80266846	80245453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252615_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770
ENSMUST00000105342.8	chr10	-	2928	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105342.8	2928	19	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_12	316.935193165206	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269477	80245380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUST00000105343.8	chr10	-	2920	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105343.8	2920	19	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_12	245.119472004073	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269481	80245380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUST00000105344.8	chr10	-	2946	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105344.8	2946	19	0	0	0	0	multi-exon	TRUE	canonical	3	359	junction_12	261.05737035618	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAGGCCTGGCACAAG	NA	False	NA	0	True	ATTAAA	-43	NA	80269471	80245347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUST00000105345.10	chr10	-	2950	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_5	176.383700711101	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAGGCCTGGCACAAG	NA	False	NA	0	True	ATTAAA	-43	NA	80269481	80245347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUST00000105346.10	chr10	-	2839	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105346.10	2839	19	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_2	257.439271275891	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269455	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUST00000105348.8	chr10	-	1222	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105348.8	1222	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	422.225617676406	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACTGAAAGCAGATGAGC	NA	False	NA	NA	False	NA	NA	NA	80235256	80228672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80235051
ENSMUST00000105349.8	chr10	-	1566	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_6	141.458376288653	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235384	80228372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ENSMUST00000105350.3	chr10	-	3266	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCGTTCGCGTGGTG	NA	False	NA	0	True	AATAAA	-20	NA	80223493	80216188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80218456_80222494
ENSMUST00000105351.2	chr10	+	2100	15	FSM	ENSMUSG00000035486.15	ENSMUST00000105351.2	2100	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	2.25876975726313	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTCCTTTTTGTTT	NA	False	NA	14	True	AATAAA	-20	NA	80192292	80201323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80192502_80193817_80193926_80194075_80194193_80194620_80194751_80195075_80195164_80195243_80195340_80195988_80196188_80196273_80196401_80196519_80196597_80196955_80197029_80197237_80197316_80198842_80199000_80199849_80199980_80200056_80200168_80200923
ENSMUST00000105355.8	chr10	+	2127	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7027	False	NA	18	True	AATAAA	-19	NA	80165786	80172275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ENSMUST00000105357.2	chr10	+	2127	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	47.9921868641136	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTGTGTCCGCTAAGCTG	7027	False	NA	18	True	AATAAA	-19	NA	80165786	80172275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ENSMUST00000105361.10	chr10	+	1537	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105361.10	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_11	285.507146282737	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAACAGGGTTTAAAAA	NA	False	NA	13	True	AATAAA	-15	NA	80100849	80123727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123369
ENSMUST00000105361.10-0	chr10	+	2052	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105361.10	1537	12	0	-515	0	0	multi-exon	FALSE	canonical	3	55	junction_11	285.507146282737	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	False	NA	12	True	AATAAA	-21	NA	80100849	80124242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123369
ENSMUST00000105362.8	chr10	+	2081	12	FSM	ENSMUSG00000069565.13	ENSMUST00000105362.8	2081	12	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_9	77.3423216017195	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	False	NA	12	True	AATAAA	-21	NA	80100817	80124242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ENSMUST00000105363.8	chr10	-	988	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	3.91918358845308	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGTTGGCAGTGAG	9249	False	NA	NA	False	AATAAA	-18	NA	80096846	80093984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUST00000105363.8-0	chr10	-	881	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	94	13	0	0	multi-exon	FALSE	canonical	3	22	junction_3	3.91918358845308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAAGACTAGTGGGTT	9343	False	NA	NA	False	AATAAA	-5	NA	80096752	80093997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUST00000105365.9	chr10	+	1321	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	33.736314097555	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGACCATTTCCC	6129	False	NA	NA	False	ATTAAA	-18	NA	80003611	80007489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
ENSMUST00000105369.8	chr10	-	3121	10	FSM	ENSMUSG00000035640.19	ENSMUST00000105369.8	3121	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	10.6817023658263	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9074	False	NA	-6	True	CATAAA	-13	NA	79975199	79966384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ENSMUST00000105370.8	chr10	+	1474	8	FSM	ENSMUSG00000003068.18	ENSMUST00000105370.8	1474	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	15.1131784633579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTGCCACCTGGGCTG	1019	False	NA	13	True	AATAAA	-17	NA	79961208	79966509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
ENSMUST00000105378.9	chr10	-	3197	15	FSM	ENSMUSG00000013833.16	ENSMUST00000105378.9	3197	15	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_14	45.000680266967	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTGTCACCGTGGT	1814	False	NA	-1	True	AATAAA	-18	NA	79744755	79730541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743488_79744651
ENSMUST00000105379.3	chr10	+	2519	8	FSM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_7	12.869835005206	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	79629405	79656730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79654874
ENSMUST00000105381.5	chr10	+	1240	6	FSM	ENSMUSG00000023175.16	ENSMUST00000105381.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	6175	junction_4	464.180568313668	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79545431	79547803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUST00000105384.5	chr10	+	2329	16	FSM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	41.9345521815444	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5399	False	NA	30	True	AATAAA	-39	NA	78410333	78420336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUST00000105387.8	chr10	-	1316	9	FSM	ENSMUSG00000001211.16	ENSMUST00000105387.8	1316	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	155.257044928725	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAAGAGACACTTAGAG	NA	False	NA	-18	True	ATTAAA	-20	NA	78131228	78109444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78131168
ENSMUST00000105388.8	chr10	-	3681	11	FSM	ENSMUSG00000001211.16	ENSMUST00000105388.8	3681	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	153.163605337561	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATGCTTTTTCTCTT	NA	False	NA	-13	True	AATAAA	-5	NA	78187887	78107396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187656
ENSMUST00000105389.8	chr10	-	3678	9	FSM	ENSMUSG00000001211.16	ENSMUST00000105389.8	3678	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	155.257044928725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATGCTTTTTCTCTT	NA	False	NA	-13	True	AATAAA	-5	NA	78134032	78107396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78133658
ENSMUST00000105390.8	chr10	-	3513	11	FSM	ENSMUSG00000001211.16	ENSMUST00000105390.8	3513	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	153.669417907403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATGCTTTTTCTCTT	NA	False	NA	-13	True	AATAAA	-5	NA	78187699	78107396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187636
ENSMUST00000105390.8-0	chr10	-	5534	11	FSM	ENSMUSG00000001211.16	ENSMUST00000105390.8	3513	11	-254	-1767	-66	-618	multi-exon	FALSE	canonical	0	0	junction_10	153.669417907403	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGCTGTAGTGCTCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	78187953	78105629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187636
ENSMUST00000105393.3	chr10	+	2814	7	FSM	ENSMUSG00000000732.10	ENSMUST00000105393.3	2814	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.83045891539648	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGTGTCTGGTGGCTT	NA	False	NA	5	True	AATAAA	-17	NA	77905135	77915359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77905370_77906994_77907114_77907571_77907926_77909540_77909835_77911038_77911189_77912977_77913008_77913726
ENSMUST00000105397.10	chr10	+	1818	7	FSM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1.5723301886761	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTGTGTCCCAGGCCC	NA	False	NA	12	True	AATAAA	-12	NA	77814357	77821268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77814616_77815586_77815606_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ENSMUST00000105410.10	chr10	+	2347	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.1875602643405	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGTTGTGAGACAC	NA	False	NA	16	True	ATTAAA	-18	NA	76869045	76886265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUST00000105431.8	chr10	+	2052	8	FSM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	0	624	0	0	multi-exon	FALSE	canonical	3	29	junction_7	390.63955932051	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490726	72504997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72503730
ENSMUST00000105436.9	chr10	+	3380	15	FSM	ENSMUSG00000043259.16	ENSMUST00000105436.9	3380	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	8.58332507759989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATTATGTTGAAAGC	9686	False	NA	NA	False	AATAAA	-14	NA	70276497	70394559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUST00000105437.8	chr10	+	3932	13	FSM	ENSMUSG00000037846.19	ENSMUST00000105437.8	3932	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	29.5700674481627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGCTTCTGATTCCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	67815427	67879694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841520_67849735_67849746_67853637_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUST00000105442.3	chr10	-	3740	8	FSM	ENSMUSG00000020063.17	ENSMUST00000105442.3	3740	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	79.0360289839452	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGTTTTAAAGTCTTAT	NA	False	NA	-2	True	AATACA	-22	NA	63174814	63154836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63171414_63171657_63174343
ENSMUST00000105447.11	chr10	-	2597	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_7	50.5010829091813	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	5198	False	NA	-11	True	AATAAA	-12	NA	62322584	62291055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUST00000105455.9	chr10	+	1512	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	38.6497408676411	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	8	True	AATAAA	-19	NA	61551041	61574432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
ENSMUST00000105465.8	chr10	+	2646	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_6	81.2601199887849	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATCTGGCCTTGTGTC	6989	False	NA	NA	False	AATAAA	-13	NA	60113448	60138373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUST00000105466.3	chr10	+	2918	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_7	20.6288880070682	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGGGCTCCGGCTCATT	NA	False	NA	NA	False	NA	NA	NA	59159189	59208073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUST00000105490.3	chr10	-	4025	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTGGGTGGTTCGGTCC	NA	False	NA	-105	True	NA	NA	NA	44334683	44314288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ENSMUST00000105490.3-0	chr10	-	5141	7	FSM	ENSMUSG00000038151.14	ENSMUST00000105490.3	4025	7	0	-1116	0	0	multi-exon	FALSE	canonical	3	20	junction_6	13.6218778278017	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCAATGCTTGTCTAGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	44334683	44313172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ENSMUST00000105499.2	chr10	+	1057	3	FSM	ENSMUSG00000019804.13	ENSMUST00000105499.2	1057	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGCACGGCCTCCAG	NA	False	NA	23	True	AATAAA	-24	NA	42378285	42411377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_42378489_42409144_42409270_42410648
ENSMUST00000105502.8	chr10	-	6848	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	10.6562449087639	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAGGAGTCTGTCATC	NA	False	NA	-2	True	AATAAA	-22	NA	42152748	42057836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
ENSMUST00000105505.10	chr10	-	2071	9	FSM	ENSMUSG00000019813.17	ENSMUST00000105505.10	2071	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	56.5215666803389	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGAAATATTCTGGGA	NA	False	NA	5	True	AATAAA	-26	NA	41621927	41594835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUST00000105509.2	chr10	+	2719	9	FSM	ENSMUSG00000019831.15	ENSMUST00000105509.2	2719	9	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	32.5209067370515	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTGTCGCTCTTCGAGT	NA	False	NA	18	True	AATAAA	-20	NA	40759822	40814566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641
ENSMUST00000105512.8	chr10	-	2727	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	20.4676725553911	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294535	34179604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUST00000105519.10	chr10	-	4500	21	FSM	ENSMUSG00000039089.16	ENSMUST00000105519.10	4500	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	9.67096168951154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTATATATGTATGA	NA	False	NA	-8	True	AATAAA	-15	NA	26249952	26150365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220509_26220622_26228156_26228274_26249696
ENSMUST00000105525.12	chr10	+	4851	24	FSM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	6.91700734047638	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGGTTTCTTTCTTTT	NA	False	NA	16	True	AATAAA	-21	NA	20828445	20956328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811_20893933_20917084_20917141_20930879_20931043_20934051_20934150_20948441_20948501_20950273_20950377_20954982
ENSMUST00000105534.10	chr10	-	1390	5	FSM	ENSMUSG00000019806.14	ENSMUST00000105534.10	617	5	-158	-615	0	0	multi-exon	FALSE	canonical	2	6	junction_1	50.8742321809381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTGCACTGTTCA	NA	False	NA	0	True	AATAAA	-17	NA	13744724	13522797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13523451_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ENSMUST00000105539.2	chr10	-	1961	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	40.2069029063706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATATAGCTTTGTTT	NA	False	NA	NA	False	AATAAA	-8	NA	13428864	13399885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
ENSMUST00000105543.9	chr10	-	2735	12	FSM	ENSMUSG00000062866.17	ENSMUST00000105543.9	2735	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	13.2378121085581	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTATCTCCAAAGTCAG	9902	False	NA	-6	True	AATAAA	-21	NA	13200033	13089138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13199807
ENSMUST00000105546.8	chr10	-	2808	13	FSM	ENSMUSG00000062866.17	ENSMUST00000105546.8	2808	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	20.3884158286023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTATCTCCAAAGTCAG	NA	False	NA	-6	True	AATAAA	-21	NA	13264497	13089138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13133320_13133561_13137509_13137669_13142716_13142798_13167538_13167707_13264438
ENSMUST00000105569.5	chr4	-	2723	12	FSM	ENSMUSG00002076083.1	ENSMUST00000105569.5	2723	12	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	16.0850014835956	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGGCCCCCTTTGTAC	8248	False	NA	0	True	AATAAA	-40	NA	156319314	156313791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317680_156317903_156318048_156318171_156318259_156318520_156319112
ENSMUST00000105574.9	chr4	-	7193	35	FSM	ENSMUSG00000041936.19	ENSMUST00000105574.9	7193	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_34	105.5815498457	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156270358	156249746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156270007
ENSMUST00000105578.2	chr4	+	1654	7	FSM	ENSMUSG00000029076.15	ENSMUST00000105578.2	1654	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	268.571995313485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCTTGGGATGGTTG	NA	False	NA	136	True	NA	NA	NA	156077833	156094775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156078027_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUST00000105579.8	chr4	+	1670	8	FSM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	241.738769445576	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTCTCCAGCATGTG	NA	False	NA	28	True	ATTAAA	-19	NA	156077328	156094667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156077464_156077609_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUST00000105583.9	chr4	+	1434	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	334.708584793838	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTGTGTGTGTTCT	795	False	NA	34	True	TATAAA	-16	NA	156028325	156042168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUST00000105584.10	chr4	+	4365	24	FSM	ENSMUSG00000029033.17	ENSMUST00000105584.10	4365	24	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_10	11.8275254879557	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	False	NA	10	True	AATAAA	-15	NA	155976278	155991707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155985460_155985473_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ENSMUST00000105591.2	chr4	+	773	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	1010.64072086309	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACTATAATAAATATTGG	NA	False	NA	-3	True	NA	NA	NA	155916125	155917488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
ENSMUST00000105592.8	chr4	+	1029	3	FSM	ENSMUSG00000065990.13	ENSMUST00000105592.8	1029	3	0	0	0	0	multi-exon	FALSE	canonical	3	2371	junction_1	52	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTAGGCCGACCTAGA	NA	False	NA	27	True	AATAAA	-17	NA	155916115	155917518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155916528_155916808_155917255_155917347
ENSMUST00000105595.2	chr4	+	874	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_1	40.2685430026411	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACCAAATGCTTTGGCT	NA	False	NA	NA	False	AGTAAA	-26	NA	155789591	155816646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
ENSMUST00000105598.2	chr4	+	2673	20	FSM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	84.1228490935262	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	4003	False	NA	23	True	ATTAAA	-28	NA	155709366	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUST00000105613.10	chr4	+	3152	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_7	32.1412173266612	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGTAACAGCTTTCTTC	9572	False	NA	38	True	AATAAA	-24	NA	155648156	155675458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUST00000105616.10	chr4	+	3088	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	0	0	0	0	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575820	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUST00000105616.10-0	chr4	+	1626	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	6	1456	0	160	multi-exon	FALSE	canonical	3	1867	junction_1	609.593339858631	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCCTGAGTGTGATTG	NA	False	NA	5	True	AATAAA	-15	NA	155575826	155642270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUST00000105627.8	chr4	+	1011	4	FSM	ENSMUSG00000073684.14	ENSMUST00000105627.8	710	4	0	-301	0	0	multi-exon	FALSE	canonical	2	17	junction_1	91.7617688485909	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTGTTTCCTTCATAG	NA	False	NA	5	True	NA	NA	NA	155334445	155341141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155334520_155335001_155335108_155335212_155335494_155340591
ENSMUST00000105632.8	chr4	+	1431	10	FSM	ENSMUSG00000029056.14	ENSMUST00000105632.8	1431	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	27.5228300296228	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155058989	155065395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ENSMUST00000105645.9	chr4	+	977	3	FSM	ENSMUSG00000047613.11	ENSMUST00000105645.9	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATACTGTGTTCACA	NA	False	NA	NA	False	AATAAA	-22	NA	154041693	154046375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154041780_154044987_154045450_154045946
ENSMUST00000105665.3	chr4	-	832	3	FSM	ENSMUSG00000039759.11	ENSMUST00000105665.3	832	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	59.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGAGAGCTGGTCATTCT	NA	False	NA	NA	False	NA	NA	NA	152073427	152067258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_152067810_152070125_152070319_152073339
ENSMUST00000105670.8	chr4	-	4961	12	FSM	ENSMUSG00000014592.22	ENSMUST00000105670.8	4961	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	4.69217741838689	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCTTTCTGGCTGCACG	NA	False	NA	NA	False	AATAAA	-13	NA	151193033	151144270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168319_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
ENSMUST00000105675.8	chr4	-	882	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105675.8	882	7	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_6	2038.03331806807	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	5729	False	NA	-1	True	AATAAA	-26	NA	150998894	150981589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150998776
ENSMUST00000105676.8	chr4	-	582	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105676.8	582	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	2147.49225842609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGTATGTGAAGCAGCC	NA	False	NA	-104	True	NA	NA	NA	150992870	150981692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_150981760_150981828_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774
ENSMUST00000105682.9	chr4	+	7728	23	FSM	ENSMUSG00000039852.18	ENSMUST00000105682.9	7728	23	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	25.3224249749421	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150366102	150706423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ENSMUST00000105683.9	chr4	-	1460	7	FSM	ENSMUSG00000028972.12	ENSMUST00000105683.9	1460	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.44802681092953	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTACTATTCTTTT	NA	False	NA	2	True	AATAAA	-28	NA	150282927	150271471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_150271966_150273577_150273702_150276931_150277090_150278164_150278235_150280512_150280606_150281774_150281924_150282555
ENSMUST00000105686.3	chr4	-	1887	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTTTCCTGCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	149858734	149828492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ENSMUST00000105686.3-0	chr4	-	1451	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	0	436	0	-436	multi-exon	FALSE	canonical	3	394	junction_5	32.4623713791146	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCGTGCTGGGCTGTGTTC	NA	False	NA	-3	True	ATTAAA	-19	NA	149858734	149828928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ENSMUST00000105687.9	chr4	-	3697	11	FSM	ENSMUSG00000044700.16	ENSMUST00000105687.9	3697	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	67.7469556511582	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTGTGTTTTCTTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	149822501	149799831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ENSMUST00000105691.8	chr4	+	4459	18	FSM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_9	51.7981175594149	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670924	149733356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUST00000105695.2	chr4	-	544	3	FSM	ENSMUSG00000073705.11	ENSMUST00000105695.2	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	55.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTTGATTGTTGTGGGTC	NA	False	NA	NA	False	ATTAAA	-16	NA	149222034	149215811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149216130_149216715_149216840_149221932
ENSMUST00000105699.8	chr4	-	1904	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	346.808024064547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711215	148701182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUST00000105707.2	chr4	+	949	8	FSM	ENSMUSG00000029003.12	ENSMUST00000105707.2	949	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	213.795439137317	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGATGAACATGTGTA	NA	False	NA	27	True	AATAAA	-35	NA	148225199	148230153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229582_148229654_148229828
ENSMUST00000105715.8	chr4	-	4043	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105715.8	4043	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	19.4380942011515	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAATGGAAAGACAGTGT	NA	False	NA	NA	False	NA	NA	NA	147989155	147958472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147988906
ENSMUST00000105716.9	chr4	-	4241	19	FSM	ENSMUSG00000029020.14	ENSMUST00000105716.9	4241	19	0	0	0	0	multi-exon	TRUE	canonical	2	51	junction_4	9.87139526330723	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTCTCTGCCTGCAG	NA	False	NA	-4	True	AATAAA	-19	NA	147989144	147958055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987955_147989114
ENSMUST00000105718.8	chr4	-	346	4	FSM	ENSMUSG00000059423.14	ENSMUST00000105718.8	4238	4	0	3892	0	-131	multi-exon	FALSE	canonical	3	42	junction_2	6.37704215656966	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTATCCTCAGTGGCATG	3941	False	NA	NA	False	NA	NA	NA	147932823	147911334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147911404_147912866_147912928_147913126_147913254_147932734
ENSMUST00000105720.8	chr4	-	2594	5	FSM	ENSMUSG00000066000.13	ENSMUST00000105720.8	2594	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	194.219592214586	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726970	147696393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726791
ENSMUST00000105721.9	chr4	+	1488	4	FSM	ENSMUSG00000078496.10	ENSMUST00000105721.9	1488	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	138.089343059726	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAACCTTACAAATGT	NA	False	NA	NA	False	NA	NA	NA	147576873	147597943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_147577038_147592042_147592098_147595209_147595337_147596801
ENSMUST00000105733.3	chr4	+	4550	4	FSM	ENSMUSG00000070605.5	ENSMUST00000105733.3	4550	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	316.872564641091	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGCCTGTCAGCT	NA	False	NA	NA	False	NA	NA	NA	146533479	146554749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146533533_146547961_146548020_146548860_146548988_146550437
ENSMUST00000105734.10	chr4	-	2729	6	FSM	ENSMUSG00000078495.11	ENSMUST00000105734.10	2729	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	98.3963413953995	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9523	False	NA	NA	False	NA	NA	NA	147894245	147838430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147840693_147842158_147842286_147845677_147845736_147880114_147880182_147891546_147891641_147894124
ENSMUST00000105738.9	chr4	+	4006	5	FSM	ENSMUSG00000058186.14	ENSMUST00000105738.9	4006	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	173.168992605489	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145397254	145431011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145397419_145399301_145399395_145422720_145422806_145425813_145425941_145427474
ENSMUST00000105741.2	chr4	+	3044	5	FSM	ENSMUSG00000078503.10	ENSMUST00000105741.2	3044	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	215.70972972956	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGATTGTTTCCAAT	5019	False	NA	NA	False	NA	NA	NA	145241453	145265758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145241589_145247375_145247456_145257381_145257486_145261385_145261513_145263160
ENSMUST00000105742.8	chr4	+	2996	4	FSM	ENSMUSG00000078503.10	ENSMUST00000105742.8	2996	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	195.188797492752	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGATTGTTTCCAAT	894	False	NA	NA	False	NA	NA	NA	145237328	145265758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145237496_145257381_145257486_145261385_145261513_145263160
ENSMUST00000105751.2	chr4	+	1745	3	FSM	ENSMUSG00000078508.2	ENSMUST00000105751.2	1745	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCAATGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	144056818	144060035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_144057106_144057681_144058255_144059150
ENSMUST00000105762.2	chr4	-	1753	3	FSM	ENSMUSG00000078509.2	ENSMUST00000105762.2	1753	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGGCACACGCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	143720939	143717688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_143718582_143719503_143720077_143720652
ENSMUST00000105782.2	chr4	-	1749	1	FSM	ENSMUSG00000040715.13	ENSMUST00000105782.2	1749	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGGAAGTGGGCTAGGC	9721	False	NA	NA	False	NA	NA	NA	141412910	141411161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141411200_141412900
ENSMUST00000105784.8	chr4	-	3036	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_5	205.258944689385	2321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327235	141303372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ENSMUST00000105785.9	chr4	-	3091	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105785.9	3091	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	527.600405136311	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141333363	141303372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141333231
ENSMUST00000105798.8	chr4	-	3839	22	FSM	ENSMUSG00000040964.17	ENSMUST00000105798.8	3839	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	73.4155074537654	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140311654	140241795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140296066_140296082_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140311443
ENSMUST00000105799.8	chr4	-	4508	29	FSM	ENSMUSG00000040964.17	ENSMUST00000105799.8	4508	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	63.5849905277037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376061	140241795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140296066_140296082_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ENSMUST00000105804.2	chr4	+	786	4	FSM	ENSMUSG00000028751.14	ENSMUST00000105804.2	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.79869268479038	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTTCCATTATTTCTTC	NA	False	NA	NA	False	NA	NA	NA	138606670	138610128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138606808_138607661_138607801_138607980_138608088_138609725
ENSMUST00000105811.9	chr4	-	2926	2	FSM	ENSMUSG00000043621.14	ENSMUST00000105811.9	2926	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCCTGTGTGAAGGCG	7349	False	NA	NA	False	AATAAA	-13	NA	138452576	138445848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138448690_138452491
ENSMUST00000105837.2	chr4	+	3036	3	FSM	ENSMUSG00000043411.16	ENSMUST00000105837.2	3036	3	0	0	0	0	multi-exon	FALSE	canonical	3	960	junction_2	127	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTTCCGTGCTTCCA	NA	False	NA	NA	False	AATAAA	-6	NA	137345781	137352602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_137348571_137350584_137350700_137352470
ENSMUST00000105840.8	chr4	+	5741	27	FSM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_13	294.548307788895	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	503	False	NA	17	True	ATTAAA	-27	NA	137321450	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ENSMUST00000105846.9	chr4	-	3653	16	FSM	ENSMUSG00000028664.15	ENSMUST00000105846.9	3653	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	7.94816540676736	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAAACAGGCTAGATCTT	NA	False	NA	NA	False	NA	NA	NA	136563154	136381956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399822_136400573_136400683_136402678_136402842_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ENSMUST00000105847.8	chr4	-	3028	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	0	0	0	0	multi-exon	FALSE	canonical	3	991	junction_18	209.393504887799	1994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTAATTGTGTGTG	NA	False	NA	-9	True	AATAAA	-26	NA	136329998	136277854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ENSMUST00000105849.9	chr4	+	7438	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGAGTCAGTGATGCC	4157	False	NA	15	True	AATAAA	-21	NA	136197071	136276630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
ENSMUST00000105849.9-0	chr4	+	4691	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	0	2747	0	178	multi-exon	FALSE	canonical	3	86	junction_2	34.7658836600865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTGACCACACGGGGA	4157	False	NA	NA	False	AATAAA	-18	NA	136197071	136273883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
ENSMUST00000105850.8	chr4	+	2683	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	130.381325349914	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUST00000105851.9	chr4	-	1700	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_4	31.7893063780888	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAGGTTCAGCCTCTGC	2115	False	NA	-3	True	AATAAA	-19	NA	135714575	135702770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
ENSMUST00000105852.8	chr4	-	1588	10	FSM	ENSMUSG00000028670.15	ENSMUST00000105852.8	1588	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	142.996848795462	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCCTTATGTGGTACA	NA	False	NA	-11	True	ATTAAA	-20	NA	135699240	135695534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699169
ENSMUST00000105853.10	chr4	+	3058	6	FSM	ENSMUSG00000028676.18	ENSMUST00000105853.10	3058	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	578.7306800231	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4321	False	NA	NA	False	AATAAA	-17	NA	135583057	135593126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135583603_135585615_135585721_135589084_135589189_135590350_135590514_135590833_135590888_135591039
ENSMUST00000105855.2	chr4	-	2789	16	FSM	ENSMUSG00000037188.8	ENSMUST00000105855.2	2789	16	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	62.4956531821747	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGTTTTCATGCGCTTC	NA	False	NA	-2	True	AATAAA	-20	NA	135300941	135269198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135270085_135273553_135273619_135275723_135275810_135276549_135276639_135277606_135277642_135279056_135279194_135279310_135279390_135279846_135280006_135281823_135281919_135283113_135283226_135283397_135283552_135284154_135284229_135284478_135284825_135286413_135286476_135288479_135288667_135300718
ENSMUST00000105859.8	chr4	-	1801	5	FSM	ENSMUSG00000043924.17	ENSMUST00000105859.8	1801	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	5.49431524395898	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTTGTCACCTTGCA	5729	False	NA	0	True	ATTAAA	-17	NA	135125501	135096886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135098022_135099187_135099273_135104301_135104388_135107962_135108150_135125193
ENSMUST00000105861.8	chr4	-	3797	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	249.404846271579	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCACTCACATTTATTCG	NA	False	NA	0	True	AATAAA	-19	NA	135080632	135047794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUST00000105863.2	chr4	-	1261	7	FSM	ENSMUSG00000028822.12	ENSMUST00000105863.2	719	7	0	-542	0	0	multi-exon	FALSE	canonical	3	28	junction_6	233.0748568355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTCGTTATACCTT	NA	False	NA	-20	True	ATTAAA	-19	NA	134642326	134625159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640573_134642199
ENSMUST00000105866.3	chr4	+	1275	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	7.5	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTGGTGTCGTGCTTCC	NA	False	NA	20	True	AATAAA	-20	NA	134238309	134251238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134238481_134248782_134248913_134250264
ENSMUST00000105869.9	chr4	+	3082	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	87	-921	0	0	multi-exon	FALSE	canonical	3	35	junction_4	4.79687398208458	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGGCTGGCTTTCTTCT	1866	False	NA	20	True	ATTAAA	-22	NA	134123717	134154724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ENSMUST00000105874.9	chr4	+	3153	8	FSM	ENSMUSG00000028836.15	ENSMUST00000105874.9	3153	8	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_4	12.5324069711207	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGCCTTGCAGA	2081	False	NA	16	True	AATAAA	-21	NA	134070516	134081795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134070648_134071318_134071528_134073213_134073361_134074650_134074805_134075787_134075957_134076595_134076702_134079261_134079397_134079693
ENSMUST00000105875.8	chr4	+	1886	9	FSM	ENSMUSG00000028834.14	ENSMUST00000105875.8	1886	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	6.8545149354276	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTATGAAAGAAGTGTGA	NA	False	NA	NA	False	AATAAA	-28	NA	134042430	134056940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134042694_134043697_134043871_134046942_134047112_134048493_134048590_134050314_134050549_134052355_134052379_134052894_134053020_134055015_134055094_134056215
ENSMUST00000105876.9	chr4	-	4509	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	10	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGAAAGTTCTCTTGCT	4291	False	NA	NA	False	AATAAA	-18	NA	134014564	134002313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134006428_134011556_134011859_134014471
ENSMUST00000105887.8	chr4	-	1676	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105887.8	2038	9	-19	381	0	347	multi-exon	FALSE	canonical	3	19	junction_1	18.0346887968714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATAGGCAGCCAACATTA	NA	False	NA	NA	False	NA	NA	NA	133728201	133697884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ENSMUST00000105894.11	chr4	-	3135	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_6	97.2257582771271	2451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCCGCTCTTCCTTCTGC	7964	False	NA	-5	True	AATAAA	-18	NA	133615108	133574600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ENSMUST00000105898.2	chr7	+	2299	3	FSM	ENSMUSG00000031074.15	ENSMUST00000105898.2	2299	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	3.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCATATGGTTGGTG	NA	False	NA	3	True	NA	NA	NA	144392331	144398173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_144392665_144394407_144394512_144396311
ENSMUST00000105899.2	chr4	+	996	5	FSM	ENSMUSG00000028848.14	ENSMUST00000105899.2	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	62.5154980784765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCAAAGGACTTCTAGAG	NA	False	NA	NA	False	NA	NA	NA	133311729	133318801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_133312112_133313220_133313378_133315810_133315972_133317077_133317209_133318636
ENSMUST00000105901.2	chr4	+	1699	4	FSM	ENSMUSG00000037600.17	ENSMUST00000105901.2	1699	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	34.198765409815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACACCTGCCTGGTCAT	5563	False	NA	4	True	NA	NA	NA	133246365	133258096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_133246423_133255252_133256321_133257141_133257217_133257597
ENSMUST00000105907.9	chr4	-	1484	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_4	52.562343935559	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133005103	132993355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
ENSMUST00000105909.4	chr7	-	2462	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_21	93.4109735380392	2379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153793	143111443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ENSMUST00000105910.2	chr4	+	986	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACCTATGTCTTGGG	NA	False	NA	20	True	AATAAA	-22	NA	132948120	132951866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
ENSMUST00000105910.2-0	chr4	+	895	6	FSM	ENSMUSG00000028865.15	ENSMUST00000105910.2	986	6	91	0	91	0	multi-exon	FALSE	canonical	3	29	junction_1	9.2736184954957	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGACCTATGTCTTGGG	NA	False	NA	20	True	AATAAA	-22	NA	132948211	132951866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132948379_132948753_132948916_132949015_132949088_132949479_132949525_132950913_132951059_132951562
ENSMUST00000105914.2	chr4	+	5898	6	FSM	ENSMUSG00000037692.15	ENSMUST00000105914.2	5898	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	36.5217743271052	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGCGAGAGAGCGAGC	NA	False	NA	NA	False	AAAAAG	-12	NA	132766803	132804553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132767098_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ENSMUST00000105915.8	chr4	+	6341	7	FSM	ENSMUSG00000037692.15	ENSMUST00000105915.8	6341	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	40.1472982348197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATGTGTACCAATGTTT	1189	False	NA	NA	False	TTTAAA	-15	NA	132738816	132805174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132738835_132739500_132739599_132782323_132782515_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ENSMUST00000105951.8	chr4	-	2326	11	FSM	ENSMUSG00000028896.14	ENSMUST00000105951.8	2326	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	167.562525643415	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	NA	False	NA	-14	True	AATAAA	-17	NA	132078947	132059233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132078921
ENSMUST00000105964.2	chr4	-	1925	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	18.219511993573	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1912	False	NA	-58	True	NA	NA	NA	131988913	131952981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ENSMUST00000105965.8	chr4	-	1988	11	FSM	ENSMUSG00000028901.14	ENSMUST00000105965.8	4632	11	-81	2725	0	0	multi-exon	FALSE	canonical	2	6	junction_10	24.0074988284911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	1912	False	NA	-58	True	NA	NA	NA	131988913	131952981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131979741_131979805_131988801
ENSMUST00000105974.8	chr4	-	4844	16	FSM	ENSMUSG00000028906.18	ENSMUST00000105974.8	4844	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	38.7103201858224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131734749	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131730895_131731106_131734268
ENSMUST00000105991.9	chr4	+	4614	18	FSM	ENSMUSG00000028580.16	ENSMUST00000105991.9	4614	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	156.174288231124	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390669	130508873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUST00000105992.9	chr4	+	5058	20	FSM	ENSMUSG00000028580.16	ENSMUST00000105992.9	5058	20	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	153.52394310997	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTACTGCTCTCACTT	NA	False	NA	22	True	AATACA	-16	NA	130390669	130508873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUST00000105993.4	chr4	+	1202	7	FSM	ENSMUSG00000078532.10	ENSMUST00000105993.4	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	13.2748718344933	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGGGTCTTCCTCTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	130297196	130339628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339177_130339331
ENSMUST00000105994.4	chr4	+	1584	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_7	51.5407066738946	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACCTTGTGACTTGG	NA	False	NA	22	True	ATTAAA	-23	NA	130253924	130283819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ENSMUST00000105996.8	chr4	-	1878	10	FSM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	3.01027048536535	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCCCATGTCTTGTG	7796	False	NA	-1	True	AATAAA	-17	NA	130169379	130147287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130169250
ENSMUST00000105998.8	chr4	-	1976	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105998.8	1976	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	72.1002516014454	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCATCTCCCTAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	130068915	130059511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068694
ENSMUST00000105999.9	chr4	-	1952	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_11	29.3189922368611	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTCTGGGAGTCTTCA	NA	False	NA	NA	False	AATAAA	-19	NA	130068595	130059394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ENSMUST00000106000.10	chr7	+	1865	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	68.1968938187848	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCGAATCAGCTTGCTGA	NA	False	NA	8	True	NA	NA	NA	141047305	141051386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUST00000106003.2	chr7	+	449	4	FSM	ENSMUSG00000025508.14	ENSMUST00000106003.2	449	4	0	0	0	0	multi-exon	FALSE	canonical	3	11523	junction_3	1651.02843370091	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2597	False	NA	27	True	AATAAA	-20	NA	141027762	141031263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUST00000106007.10	chr7	-	2546	10	FSM	ENSMUSG00000019082.19	ENSMUST00000106007.10	2546	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_9	39.7436228287703	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	3505	False	NA	-19	True	AATAAA	-18	NA	141014507	141009661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141014443
ENSMUST00000106008.3	chr7	-	1898	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTACACATTGGTTGTT	5437	False	NA	NA	False	NA	NA	NA	140994049	140987706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ENSMUST00000106008.3-0	chr7	-	1435	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	58	405	0	0	multi-exon	FALSE	canonical	3	140	junction_4	16.4564980032391	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGAACTCATTTT	5495	False	NA	-16	True	NA	NA	NA	140993991	140988111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ENSMUST00000106026.3	chr17	-	1744	4	FSM	ENSMUSG00000078546.9	ENSMUST00000106026.3	1744	4	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	2.62466929133727	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCTAAGAAAATACCTGGT	NA	False	NA	NA	False	NA	NA	NA	22127073	22098550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22100076_22100938_22101066_22106291_22106340_22127029
ENSMUST00000106027.9	chr7	+	5248	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	28.6346754247049	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTACCTGTCTGCACC	NA	False	NA	-40	True	AAGAAA	-33	NA	140808701	140842539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ENSMUST00000106033.5	chr7	-	1554	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	537	0	0	0	multi-exon	FALSE	canonical	3	441	junction_9	110.454616120026	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	140748602	140740240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
ENSMUST00000106041.3	chr3	+	1971	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	17.3262806164508	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTTCTTTATTTAT	NA	False	NA	NA	False	AAAACA	-43	NA	159201094	159235096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUST00000106048.10	chr7	-	1416	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	42.0135560133737	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATCCTGTCTCTTTG	NA	False	NA	-14	True	AATAAA	-14	NA	140461782	140443582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
ENSMUST00000106050.8	chr7	+	719	4	FSM	ENSMUSG00000025481.13	ENSMUST00000106050.8	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	5.43650214343336	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGATATTCTAGCTGCC	NA	False	NA	-52	True	NA	NA	NA	140414930	140417800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140415172_140415524_140415665_140416659_140416796_140417598
ENSMUST00000106051.8	chr4	-	5049	7	FSM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	86.8210164009204	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	12	True	NA	0	True	ATTAAA	-28	NA	129121704	129113370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121519
ENSMUST00000106052.2	chr7	-	3851	3	FSM	ENSMUSG00000060314.14	ENSMUST00000106052.2	3851	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	4	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACATTGGAGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140402045	140389601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140393228_140398500_140398628_140401947
ENSMUST00000106054.4	chr4	+	2909	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	0	0	0	0	multi-exon	FALSE	canonical	3	1466	junction_9	124.991221914003	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAACACAGCTTTGTCA	713	False	NA	NA	False	AAAACA	-42	NA	129083552	129113400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUST00000106057.8	chr3	+	2737	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	297.644569915193	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCTGACTGAATGTT	NA	False	NA	3	True	AATAAA	-11	NA	157240024	157254013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
ENSMUST00000106058.8	chr3	+	2924	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	0	0	0	0	multi-exon	TRUE	canonical	3	697	junction_8	81.8057017542553	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTGTCACTGT	NA	False	NA	37	True	AATAAA	-45	NA	157239796	157254047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ENSMUST00000106059.8	chr4	-	4084	9	FSM	ENSMUSG00000040928.16	ENSMUST00000106059.8	4084	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	66.0793793478722	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1003	False	NA	-5	True	AATAAA	-15	NA	129083520	129041797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083334
ENSMUST00000106061.9	chr4	-	4426	7	FSM	ENSMUSG00000040928.16	ENSMUST00000106061.9	4426	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	60.2301142840246	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1188	False	NA	-5	True	AATAAA	-15	NA	129083335	129041797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083164
ENSMUST00000106068.8	chr4	-	2049	11	FSM	ENSMUSG00000028789.17	ENSMUST00000106068.8	2049	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	8.67698104181403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	128856221	128825814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855995_128856093
ENSMUST00000106079.10	chr4	+	2535	7	FSM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	20.8865985742054	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	False	NA	20	True	AATAAA	-21	NA	128621377	128646674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUST00000106091.9	chr4	-	1623	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127222954	127219027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_127220565_127222868
ENSMUST00000106095.3	chr7	-	1299	3	FSM	ENSMUSG00000041309.18	ENSMUST00000106095.3	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	2	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGCACATCGTGTTTC	NA	False	NA	-8	True	AATAAA	-36	NA	139162706	139161135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139161605_139161796_139161970_139162049
ENSMUST00000106098.8	chr7	+	2826	16	FSM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_13	16.0850517216728	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGCTTATTCTCC	NA	False	NA	19	True	AATAAA	-20	NA	138969024	139159568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ENSMUST00000106099.8	chr4	-	2982	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106099.8	2982	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	144.172515708488	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAACTTGCAACTTTGAG	NA	False	NA	NA	False	AATGAA	-11	NA	126954917	126941434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126943406_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ENSMUST00000106100.9	chr3	+	7607	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152101639	152168463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUST00000106100.9-0	chr3	+	4229	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	29	3349	0	0	multi-exon	FALSE	canonical	3	170	junction_1	24.8676972569618	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101668	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUST00000106101.2	chr3	+	7539	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.1683202752023	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTCCATTTATTTC	NA	False	NA	13	True	AATAAA	-15	NA	152102330	152168463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUST00000106102.9	chr4	-	3325	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	28	499	0	0	multi-exon	FALSE	canonical	3	376	junction_6	26.8206438918888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCTAATGAAGTTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	126954917	126941385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ENSMUST00000106108.9	chr4	-	7102	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126861928	126755731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ENSMUST00000106108.9-1	chr4	-	6718	30	FSM	ENSMUSG00000042446.17	ENSMUST00000106108.9	7102	30	-93	477	-93	-477	multi-exon	FALSE	canonical	3	101	junction_15	43.6375461501576	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTCATCCTGCTGTA	NA	False	NA	-9	True	AATAAA	-13	NA	126862021	126756208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ENSMUST00000106112.2	chr7	-	1756	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCGCTGTACTGGCTAGT	NA	False	NA	NA	False	AGTAAA	-19	NA	138511235	138492564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ENSMUST00000106112.2-0	chr7	-	1628	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	0	128	0	-128	multi-exon	FALSE	canonical	3	289	junction_2	24.8628236529965	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTTATATTTACATAA	NA	False	NA	-24	True	AATAAA	-19	NA	138511235	138492692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ENSMUST00000106113.2	chr11	+	5029	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_8	36.2594815186318	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATACAGAGTATCATTGT	4662	False	NA	NA	False	AATAAA	-20	NA	121150815	121200722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ENSMUST00000106115.8	chr11	-	2239	7	FSM	ENSMUSG00000039294.15	ENSMUST00000106115.8	2239	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	22.8284666346404	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCTTTCTGTTTTCTGC	NA	False	NA	0	True	AATAAA	-22	NA	121120131	121113413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121120038
ENSMUST00000106117.8	chr11	+	2149	13	FSM	ENSMUSG00000039307.17	ENSMUST00000106117.8	2149	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4.64503916979059	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCACCAGCAGAAACTCT	NA	False	NA	4	True	AATAAA	-20	NA	121095260	121113473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
ENSMUST00000106132.3	chr4	-	3195	17	FSM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	60.9301598143317	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150136	126125959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUST00000106133.8	chr11	-	1762	14	FSM	ENSMUSG00000025155.16	ENSMUST00000106133.8	1762	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	320.059646807892	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687224	120680031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682787_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687135
ENSMUST00000106135.8	chr11	-	1863	14	FSM	ENSMUSG00000025155.16	ENSMUST00000106135.8	1863	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	245.913368110366	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687229	120680026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682787_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ENSMUST00000106138.8	chr3	-	3999	10	FSM	ENSMUSG00000005034.16	ENSMUST00000106138.8	3999	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.8252877664575	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAACAAT	842	False	NA	NA	False	NA	NA	NA	146476536	146435619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146476270
ENSMUST00000106139.8	chr7	-	2233	11	FSM	ENSMUSG00000030986.14	ENSMUST00000106139.8	2233	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	118.743589300644	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGAAAAAAATCAT	NA	False	NA	55	True	NA	NA	NA	133378430	133322776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133378330
ENSMUST00000106145.10	chr7	-	1644	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106145.10	1644	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	18.4477908610847	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCTGAGTATGGTAGC	NA	False	NA	NA	False	NA	NA	NA	133310798	133288084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310652
ENSMUST00000106146.8	chr7	-	1483	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106146.8	1483	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	22.221666659722	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCTGAGTATGGTAGC	NA	False	NA	NA	False	NA	NA	NA	133310687	133288084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304149_133310652
ENSMUST00000106148.10	chr11	-	830	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	29.9035486560077	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGATCTGTGCTATCTG	6916	False	NA	-4	True	AATAAA	-37	NA	120618069	120616224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ENSMUST00000106150.3	chr4	+	1144	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGCGACTCAGTCTCT	7130	False	NA	11	True	AATGAA	-6	NA	126042324	126043658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126042839_126043028
ENSMUST00000106151.8	chr3	+	3232	14	FSM	ENSMUSG00000036825.13	ENSMUST00000106151.8	3232	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	53.8853703345785	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCCTCTACTAAAGAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	146110396	146145537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_146110691_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138730_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUST00000106152.3	chr4	+	891	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	472	1	-57	0	multi-exon	FALSE	canonical	3	244	junction_1	47.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	7073	False	NA	20	True	AATGAA	-15	NA	126042267	126043667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126042425_126042743_126042839_126043028
ENSMUST00000106154.8	chr11	-	873	6	FSM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	397.451380674417	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604558	120601767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603539_120604518
ENSMUST00000106157.8	chr7	+	3648	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	0	1360	0	1035	multi-exon	TRUE	canonical	3	56	junction_1	22.7129157795708	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGGTGGTCAATGCATT	NA	False	NA	4	True	AATAAA	-15	NA	132532870	132586760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ENSMUST00000106158.9	chr11	+	1690	15	FSM	ENSMUSG00000025142.19	ENSMUST00000106158.9	1690	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	252.602010107212	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563881	120600270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUST00000106168.2	chr7	-	3630	4	FSM	ENSMUSG00000030956.16	ENSMUST00000106168.2	3630	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.1490197581754	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTCAGCTTTCAGCAG	NA	False	NA	NA	False	AGTAAA	-21	NA	132378645	132315093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132378484
ENSMUST00000106169.8	chr7	-	4536	5	FSM	ENSMUSG00000030956.16	ENSMUST00000106169.8	4536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.6373204105224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCACATTAAACAGGACAT	NA	False	NA	NA	False	AATAAA	-7	NA	132404493	132314534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132404235
ENSMUST00000106177.8	chr11	-	2212	11	FSM	ENSMUSG00000042988.11	ENSMUST00000106177.8	2212	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_10	9.96042167782067	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9796	False	NA	NA	False	ATTAAA	-21	NA	120551432	120544613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
ENSMUST00000106178.9	chr11	-	2012	12	FSM	ENSMUSG00000042988.11	ENSMUST00000106178.9	2012	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	31.1782399219087	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9573	False	NA	NA	False	ATTAAA	-21	NA	120551655	120544613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820_120551192_120551614
ENSMUST00000106188.4	chr11	-	1486	13	FSM	ENSMUSG00000025137.16	ENSMUST00000106188.4	1486	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	91.5034911295131	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCGTGTTGCTGTGT	NA	False	NA	NA	False	NA	NA	NA	120508751	120501242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ENSMUST00000106192.9	chr3	+	2425	16	FSM	ENSMUSG00000028256.17	ENSMUST00000106192.9	2425	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	23.1944437791084	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAAGTGTCTCGCTATA	NA	False	NA	NA	False	AATAAA	-43	NA	144824349	144859676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ENSMUST00000106197.10	chr11	-	1867	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	0	0	0	0	multi-exon	TRUE	canonical	3	3168	junction_5	160.793780974265	3764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGGTCTGTGCAGCTT	NA	False	NA	-10	True	AATAAA	-22	NA	120472450	120468929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ENSMUST00000106203.9	chr11	+	2903	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106203.9	2903	22	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_14	76.3896503775692	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8182	False	NA	13	True	AATAAA	-14	NA	120358460	120374805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUST00000106204.2	chr4	+	1120	7	FSM	ENSMUSG00000043333.13	ENSMUST00000106204.2	1120	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.97562014729219	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123703706	123723697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_123703970_123708035_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
ENSMUST00000106205.9	chr11	+	2900	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_14	47.8204313112466	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8182	False	NA	13	True	AATAAA	-14	NA	120358460	120374805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUST00000106206.8	chr4	-	599	3	FSM	ENSMUSG00000028648.14	ENSMUST00000106206.8	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	1021.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	1848	False	NA	-25	True	AATAAA	-17	NA	123611979	123606502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123606720_123609656_123609875_123611815
ENSMUST00000106207.8	chr4	-	680	2	FSM	ENSMUSG00000028648.14	ENSMUST00000106207.8	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	2108	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGCTTTTGGGTCA	3708	False	NA	-25	True	AATAAA	-17	NA	123610119	123606502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123606720_123609656
ENSMUST00000106215.11	chr11	-	1827	5	FSM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	0	0	0	0	multi-exon	FALSE	canonical	3	5636	junction_4	437.152933765747	7527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120238917	120236516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794
ENSMUST00000106218.8	chr3	+	1888	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	10.4835740777555	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATACCTCATCTGCAGCT	NA	False	NA	NA	False	NA	NA	NA	142406811	142450288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ENSMUST00000106223.4	chr11	+	439	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	0	342	0	0	multi-exon	FALSE	canonical	3	883	junction_2	30.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGATGATTTAATTTTG	NA	False	NA	19	True	NA	NA	NA	119989753	119991189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119989892_119989973_119990085_119990999
ENSMUST00000106226.9	chr7	-	4451	12	FSM	ENSMUSG00000030846.16	ENSMUST00000106226.9	4451	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	64.264304450031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCTCTTAGTGTTG	NA	False	NA	-6	True	AATAAA	-16	NA	128063396	128041500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
ENSMUST00000106227.8	chr11	-	3578	26	FSM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	26.0287840668749	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTCACCTGCTTGTCT	NA	False	NA	-9	True	AGTAAA	-27	NA	119977653	119955255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ENSMUST00000106228.8	chr7	-	1640	13	FSM	ENSMUSG00000030846.16	ENSMUST00000106228.8	2835	13	318	877	0	0	multi-exon	FALSE	canonical	3	12	junction_12	81.5772895275803	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063079	128044003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128060320_128060381_128062848
ENSMUST00000106229.8	chr11	-	3581	26	FSM	ENSMUSG00000039781.15	ENSMUST00000106229.8	3581	26	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	26.0287840668749	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTCACCTGCTTGTCT	NA	False	NA	-9	True	AGTAAA	-27	NA	119977653	119955255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963801_119963948_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ENSMUST00000106233.2	chr11	+	2442	15	FSM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	13.1158495799579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTGTGTGGTCTGTTGT	NA	False	NA	10	True	AATAAA	-16	NA	119833588	119897608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119893863_119893912_119897184
ENSMUST00000106241.8	chr4	+	3050	15	FSM	ENSMUSG00000011257.20	ENSMUST00000106241.8	3050	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	103.994922364272	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	NA	False	NA	8	True	AATAAA	-31	NA	123176624	123192625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUST00000106243.8	chr4	+	3111	14	FSM	ENSMUSG00000011257.20	ENSMUST00000106243.8	3111	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	102.125111806737	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACAGGGTTTCTCTGTG	NA	False	NA	9	True	AATAAA	-23	NA	123176617	123192718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUST00000106244.9	chr11	+	1356	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	42	3672	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.28010988928052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGGCTTTACCCTC	6296	False	NA	NA	False	AATACA	-8	NA	119382214	119398577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ENSMUST00000106245.9	chr11	+	3180	8	FSM	ENSMUSG00000039850.17	ENSMUST00000106245.9	5126	8	0	1946	0	-88	multi-exon	FALSE	canonical	3	37	junction_3	3.65892813567591	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGAGTGTCTGGGGAGC	6537	False	NA	7	True	ATTAAA	-18	NA	119382455	119400317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ENSMUST00000106251.10	chr7	+	1833	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	34	3669	0	0	multi-exon	FALSE	canonical	3	619	junction_3	208.17746550205	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1184	False	NA	37	True	ATTAAA	-20	NA	127566662	127581204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ENSMUST00000106252.9	chr4	+	3293	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	34.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGTGGGGGTAGCAT	3471	False	NA	NA	False	AATAAA	-18	NA	122889736	122896278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_122889944_122890306_122890812_122893697
ENSMUST00000106255.8	chr4	-	2737	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_12	193.312139642945	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGATGTTTTCAGTA	NA	False	NA	-7	True	AATAAA	-25	NA	122779837	122752839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
ENSMUST00000106257.10	chr4	-	2768	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_12	172.387322297462	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGATGTTTTCAGTA	NA	False	NA	-7	True	AATAAA	-25	NA	122779849	122752839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ENSMUST00000106258.2	chr11	+	1369	3	FSM	ENSMUSG00000025579.15	ENSMUST00000106258.2	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_2	31.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAAATACTCCCTC	NA	False	NA	NA	False	NA	NA	NA	119158853	119164278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119159049_119160913_119161505_119163695
ENSMUST00000106259.9	chr11	+	3633	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	0	0	0	0	multi-exon	TRUE	canonical	3	393	junction_7	40.3001893687597	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158712	119176280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUST00000106261.8	chr7	-	2410	3	FSM	ENSMUSG00000049728.15	ENSMUST00000106261.8	2410	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTGTATTGTGGT	NA	False	NA	2	True	ATTAAA	-20	NA	127474818	127465164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127466536_127466927_127467597_127474448
ENSMUST00000106280.8	chr4	-	2362	6	FSM	ENSMUSG00000064141.15	ENSMUST00000106280.8	2362	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	16.2898741554378	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGATTTACAGATTAG	6836	False	NA	NA	False	NA	NA	NA	120808896	120787333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120788704_120791529_120791629_120792263_120792391_120804485_120804767_120806528_120806758_120808640
ENSMUST00000106281.3	chr4	-	1764	5	FSM	ENSMUSG00000064141.15	ENSMUST00000106281.3	1764	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	16.8874953737966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGATTCTGAGCTTTA	9101	False	NA	NA	False	NA	NA	NA	120806631	120787549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120788704_120791529_120791629_120792263_120792391_120804485_120804767_120806528
ENSMUST00000106287.8	chr11	-	1476	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106287.8	1476	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	67.913547985656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTTTGCTTTTTTTCTT	8992	False	NA	NA	False	CATAAA	-17	NA	118309878	118298469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309797
ENSMUST00000106288.8	chr11	-	2873	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	37.662979170533	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	8992	False	NA	-1	True	AATAAA	-17	NA	118309878	118297114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
ENSMUST00000106291.10	chr3	+	1512	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135143994	135171819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000106291.10-0	chr3	+	3570	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	82	-2140	0	0	multi-exon	FALSE	canonical	2	536	junction_1	766.131549422427	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144076	135173959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000106296.9	chr11	-	5655	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTGTGTCTGCCTTGT	NA	False	NA	-4	True	AATAAA	-25	NA	118181057	118150476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ENSMUST00000106296.9-0	chr11	-	4351	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	101	1203	50	0	multi-exon	FALSE	canonical	3	124	junction_6	17.6138439870461	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118180956	118151679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ENSMUST00000106300.2	chr7	-	1015	3	FSM	ENSMUSG00000045251.14	ENSMUST00000106300.2	1015	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	4	True	NA	-4	True	ATTAAA	-17	NA	127021206	127018138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127018814_127020576_127020691_127020980
ENSMUST00000106302.9	chr11	-	3119	13	FSM	ENSMUSG00000017132.18	ENSMUST00000106302.9	3119	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	16.212777882481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTGCTCTGCTGTGGG	NA	False	NA	3	True	AATAAA	-25	NA	118103568	118054991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068125_118073044_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118103474
ENSMUST00000106305.9	chr11	-	3179	13	FSM	ENSMUSG00000017132.18	ENSMUST00000106305.9	3179	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	13.1368332899862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTGCTCTGCTGTGGG	8600	False	NA	3	True	AATAAA	-25	NA	118139418	118054991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068125_118073044_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
ENSMUST00000106310.9	chr4	+	4660	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	23.2197550545519	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCAGCCTGATGGTCTGT	NA	False	NA	23	True	AATAAA	-19	NA	119396884	119486316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ENSMUST00000106312.4	chr7	+	3342	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATTGTCATAGACAACT	8108	False	NA	0	True	AATAAA	-1	NA	126832232	126837351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126832659_126834435
ENSMUST00000106313.8	chr7	-	1285	10	FSM	ENSMUSG00000000486.14	ENSMUST00000106313.8	1285	10	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_7	44.4297197830461	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAACCAGATCCCTCCAA	NA	False	NA	NA	False	NA	NA	NA	126817475	126813814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312
ENSMUST00000106314.8	chr7	-	1486	11	FSM	ENSMUSG00000000486.14	ENSMUST00000106314.8	1486	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_10	48.9043965303734	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTCCCGCCTTCCCCCA	NA	False	NA	-22	True	AATAAA	-3	NA	126817670	126813633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126815980_126816072_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
ENSMUST00000106316.2	chr4	-	954	3	FSM	ENSMUSG00000028636.15	ENSMUST00000106316.2	954	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	146.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	5549	False	NA	-4	True	AATAAA	-30	NA	119279573	119275726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119276491_119278776_119278881_119279487
ENSMUST00000106321.9	chr4	-	1288	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_8	172.260640876149	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTACCTTGTCTAGCCTG	9644	False	NA	-2	True	NA	NA	NA	119177681	119164356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUST00000106334.9	chr11	+	2644	16	FSM	ENSMUSG00000050106.19	ENSMUST00000106334.9	2644	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.15708789488366	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTGGAAATACTTGAAT	7632	False	NA	NA	False	NA	NA	NA	117673140	117683936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117673235_117673875_117674097_117674220_117674370_117674596_117674747_117674935_117675022_117675630_117675768_117675945_117676094_117677212_117677384_117677554_117677695_117681041_117681166_117681508_117681607_117681733_117681918_117682053_117682185_117682268_117682428_117682914_117682994_117683363
ENSMUST00000106341.9	chr3	+	3357	10	FSM	ENSMUSG00000027985.15	ENSMUST00000106341.9	3357	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	8.71779788708135	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTGGTGAACTGAACC	NA	False	NA	NA	False	AATAAA	-17	NA	130904119	131018005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_131016724
ENSMUST00000106342.8	chr7	-	1840	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106342.8	1840	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	388.334763945863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGCTTGGATTTCT	9346	False	NA	1	True	ATTAAA	-31	NA	126460858	126450751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126452164_126456397_126456515_126456847_126456895_126457045_126457125_126460411_126460465_126460647_126460719_126460797
ENSMUST00000106343.3	chr7	-	1973	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	102.030496530313	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9194	False	NA	-4	True	ATTAAA	-26	NA	126461010	126450756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUST00000106348.8	chr7	-	1460	9	FSM	ENSMUSG00000030695.17	ENSMUST00000106348.8	1460	9	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_8	6626.46755325754	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTGTTCATGTCTTG	NA	False	NA	-4	True	AATAAA	-17	NA	126399619	126394406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399459
ENSMUST00000106349.2	chr11	+	2932	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	107.436803129406	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTCTTTGGCAAGACC	NA	False	NA	102	True	AATAAA	-27	NA	117223170	117253150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUST00000106355.5	chr4	-	1588	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACTTATTTGGGGA	NA	False	NA	2	True	AGTAAA	-19	NA	119031392	119026709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119028240_119031334
ENSMUST00000106357.8	chr7	+	1594	4	FSM	ENSMUSG00000042675.16	ENSMUST00000106357.8	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	13.6381816969859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCTCACATGGAAT	8267	False	NA	17	True	AATAAA	-18	NA	126376172	126379686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126377126_126377225_126377270_126377477_126377587_126379198
ENSMUST00000106369.2	chr7	+	642	2	FSM	ENSMUSG00000047721.9	ENSMUST00000106369.2	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTCAGTGTGCTGTT	1148	False	NA	22	True	ATTAAA	-17	NA	126295144	126295869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126295272_126295354
ENSMUST00000106370.10	chr11	+	882	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	283	111	0	0	multi-exon	FALSE	canonical	3	104	junction_1	13.3603892158874	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATGGGTATGAAGA	8951	False	NA	17	True	CATAAA	-17	NA	116734386	116740455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ENSMUST00000106378.8	chr11	+	1988	5	FSM	ENSMUSG00000020812.19	ENSMUST00000106378.8	1988	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	18.9340962287615	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562494	116566624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125
ENSMUST00000106391.8	chr11	-	1841	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_5	49.0028973696177	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381174	116361670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ENSMUST00000106403.8	chr4	-	4536	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106403.8	4536	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	18.9977919709961	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGTGCATTACCTTG	NA	False	NA	-10	True	TATAAA	-14	NA	118037175	117994202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034761_118037089
ENSMUST00000106405.2	chr7	+	2279	12	FSM	ENSMUSG00000030727.13	ENSMUST00000106405.2	2279	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	14.2272001159925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTGCCTTGTGCCTGC	NA	False	NA	12	True	AATAAA	-15	NA	126028611	126045073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
ENSMUST00000106406.9	chr4	-	4663	22	FSM	ENSMUSG00000033326.16	ENSMUST00000106406.9	4663	22	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_21	11.6270464270502	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGACTGTGGTCTGCCCC	NA	False	NA	-1	True	AATAAA	-16	NA	118037240	117994153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117995568_117995681_117995775_117996066_117996187_117999579_117999751_118001095_118001282_118001569_118001679_118003277_118003334_118003755_118003833_118004194_118004400_118005881_118006064_118010386_118010508_118017330_118017702_118018851_118019052_118019591_118019840_118021575_118021714_118022043_118022148_118023581_118023632_118025581_118025776_118027118_118027234_118032750_118032927_118034591_118034774_118037089
ENSMUST00000106407.9	chr7	+	2234	13	FSM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	15.3541525327841	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTGCCTTGTGCCTGC	NA	False	NA	12	True	AATAAA	-15	NA	126028237	126045073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
ENSMUST00000106410.8	chr4	-	2225	12	FSM	ENSMUSG00000028538.13	ENSMUST00000106410.8	2225	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	18.1899981599189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	1862	False	NA	-5	True	AATAAA	-14	NA	117992111	117789354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991930
ENSMUST00000106411.10	chr11	-	3205	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTTCCTCTGGTGGTG	8920	False	NA	NA	False	ATTAAA	-19	NA	116197560	116178826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ENSMUST00000106411.10-0	chr11	-	2090	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	7	1108	0	0	multi-exon	FALSE	canonical	3	153	junction_14	26.4175940114993	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	8927	False	NA	-6	True	CATAAA	-15	NA	116197553	116179934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ENSMUST00000106413.10	chr11	-	2183	19	FSM	ENSMUSG00000020792.16	ENSMUST00000106413.10	3298	19	7	1108	0	0	multi-exon	FALSE	canonical	2	10	junction_12	61.2926847990569	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	8927	False	NA	-6	True	CATAAA	-15	NA	116197553	116179934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ENSMUST00000106425.4	chr11	-	2330	15	FSM	ENSMUSG00000020780.16	ENSMUST00000106425.4	2330	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	170.438824383246	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCTGGTTTTTGCA	9899	False	NA	-2	True	ATTAAA	-17	NA	116164961	116135991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116162738_116162806_116164751
ENSMUST00000106429.6	chr3	+	488	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	224	448	224	-448	multi-exon	FALSE	canonical	3	1657	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTATCTTT	NA	False	NA	107	True	AATAAA	-8	NA	122718075	122719385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_122718306_122719127
ENSMUST00000106435.9	chr11	-	4651	29	FSM	ENSMUSG00000020776.19	ENSMUST00000106435.9	4651	29	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_17	7.36996109424007	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	False	NA	-10	True	ATTAAA	-17	NA	116056740	116033111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657
ENSMUST00000106439.2	chr11	-	1411	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_8	33.509093914936	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTCTTCACTTTCGGG	407	False	NA	-2	True	AATAAA	-20	NA	116029694	116022642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ENSMUST00000106441.8	chr11	-	2192	6	FSM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	39.5777715390849	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	116001063	115996577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603_115998835_115999091_115999188_116000359
ENSMUST00000106442.9	chr7	-	3336	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	53.0955862029814	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969109	122878493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUST00000106444.4	chr11	-	1668	7	FSM	ENSMUSG00000034341.18	ENSMUST00000106444.4	1012	7	23	-679	0	0	multi-exon	FALSE	canonical	3	34	junction_3	412.44046708451	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCTGACTCTTGTGTG	NA	False	NA	-11	True	AGTAAA	-16	NA	115977798	115969398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ENSMUST00000106448.9	chr4	+	1555	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	0	0	0	0	multi-exon	TRUE	canonical	3	567	junction_7	49.9305302519377	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCAGTGGTAGAG	NA	False	NA	20	True	AATAAA	-20	NA	116876598	116944049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ENSMUST00000106450.8	chr11	-	4046	32	FSM	ENSMUSG00000057948.13	ENSMUST00000106450.8	4046	32	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_15	5.60845207266718	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCTATAGTTGGCTT	NA	False	NA	-1	True	AATAAA	-26	NA	115968576	115952920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
ENSMUST00000106451.8	chr11	-	3973	33	FSM	ENSMUSG00000057948.13	ENSMUST00000106451.8	3973	33	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_32	6.68246013362594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATCTATAGTTGGCT	NA	False	NA	-2	True	AATAAA	-25	NA	115968787	115952921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273_115968488_115968770
ENSMUST00000106452.2	chr11	+	3696	16	FSM	ENSMUSG00000020770.14	ENSMUST00000106452.2	3696	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	23.4630679058719	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8822	False	NA	19	True	AATAAA	-13	NA	115921147	115952040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ENSMUST00000106464.3	chr4	+	1213	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	20.3239201040316	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	5977	False	NA	15	True	AATAAA	-19	NA	116566126	116572300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUST00000106466.10	chr3	-	1484	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTGTGTCTGAGAAGGA	NA	False	NA	NA	False	ATTAAA	-23	NA	120965344	120949046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
ENSMUST00000106466.10-0	chr3	-	1039	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	0	445	0	0	multi-exon	FALSE	canonical	3	76	junction_3	13.1244047484067	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCATGTTTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	120965344	120949491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
ENSMUST00000106468.7	chr7	-	3304	12	FSM	ENSMUSG00000044702.14	ENSMUST00000106468.7	3304	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	44.3423943183529	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTGCTTGTCGAATTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	121732140	121710794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121710994_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ENSMUST00000106469.8	chr7	-	2559	13	FSM	ENSMUSG00000044702.14	ENSMUST00000106469.8	2559	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	41.4242950721219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGCTTGTTCTATTTT	NA	False	NA	0	True	AATAAA	-20	NA	121732067	121706484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121727360_121727667_121728145_121728240_121728896_121728957_121731942
ENSMUST00000106471.9	chr7	-	552	5	FSM	ENSMUSG00000030869.12	ENSMUST00000106471.9	552	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2300.90270328843	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTTCTCAATTAGTTT	6508	False	NA	-11	True	AATAAA	-16	NA	121700959	121690053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121690213_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUST00000106478.9	chr4	-	1962	5	FSM	ENSMUSG00000055900.15	ENSMUST00000106478.9	1962	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	29.1150734156725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	False	NA	-108	True	NA	NA	NA	116413133	116408829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116409321_116409518_116409542_116409678_116410927_116411964_116412101_116413069
ENSMUST00000106479.8	chr4	+	2118	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAGCAACAGTACAA	NA	False	NA	NA	False	AATAAA	-19	NA	116364745	116395432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ENSMUST00000106479.8-1	chr4	+	4634	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	80	-2596	77	2588	multi-exon	FALSE	canonical	3	65	junction_7	9.43977621556783	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTCAGTATGTTTCT	NA	False	NA	31	True	ATTAAA	-23	NA	116364825	116398028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ENSMUST00000106484.8	chr4	-	5292	30	FSM	ENSMUSG00000003810.14	ENSMUST00000106484.8	5292	30	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_24	83.2550770091545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	8919	False	NA	-2	True	AATACA	-16	NA	116320948	116163958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116190609_116190631_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ENSMUST00000106485.8	chr4	-	5705	29	FSM	ENSMUSG00000003810.14	ENSMUST00000106485.8	5705	29	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	30.4319246978617	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8487	False	NA	-3	True	AATACA	-15	NA	116321380	116163959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ENSMUST00000106486.8	chr4	-	5723	30	FSM	ENSMUSG00000003810.14	ENSMUST00000106486.8	5723	30	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_24	83.2550770091545	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8487	False	NA	-3	True	AATACA	-15	NA	116321380	116163959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116190609_116190631_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ENSMUST00000106489.9	chr7	+	3047	18	FSM	ENSMUSG00000035064.18	ENSMUST00000106489.9	3047	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	20.5168510369059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGGCCTTTATACATGC	NA	False	NA	9	True	AATATA	-16	NA	120442822	120503224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_120443009_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ENSMUST00000106496.8	chr4	+	2613	21	FSM	ENSMUSG00000028700.15	ENSMUST00000106496.8	2613	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	95.8541991777095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007721	116017041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUST00000106497.8	chr11	-	2683	5	FSM	ENSMUSG00000059923.14	ENSMUST00000106497.8	2683	5	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_3	55.2149209906163	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTTCATTTCTCC	497	False	NA	-1	True	AATAAA	-19	NA	115590360	115534870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977
ENSMUST00000106498.8	chr4	+	2719	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	0	0	0	0	multi-exon	TRUE	canonical	3	321	junction_9	36.7984644262092	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007714	116017041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUST00000106499.8	chr11	-	2333	4	FSM	ENSMUSG00000059923.14	ENSMUST00000106499.8	2333	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	445.346556689906	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTCTTCATTTCTCC	724	False	NA	-1	True	AATAAA	-19	NA	115590133	115534870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115536781_115537535_115537705_115546183_115546282_115589977
ENSMUST00000106502.2	chr3	+	2840	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	20.597329924046	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTCATCCACTGTCAAA	52	False	NA	-34	True	AATACA	-45	NA	115801868	115822609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ENSMUST00000106507.9	chr11	-	1656	5	FSM	ENSMUSG00000020743.16	ENSMUST00000106507.9	1656	5	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	39.92101576864	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503329	115498743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728
ENSMUST00000106513.10	chr4	+	2552	14	FSM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	55.5404857930697	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696429	115736447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115696479_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUST00000106516.2	chr7	+	1069	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106516.2	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	24.9977776790036	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTTTGTTGATTTT	NA	False	NA	12	True	TATAAA	-23	NA	119499330	119515979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_119499532_119509026_119509186_119513395_119513489_119515363
ENSMUST00000106518.9	chr7	+	875	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	16.3095064303001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACAGCTTTAGATTGATC	NA	False	NA	-11	True	NA	NA	NA	119495083	119515956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_119495114_119509026_119509186_119513395_119513489_119515363
ENSMUST00000106519.8	chr7	-	1475	3	FSM	ENSMUSG00000048787.14	ENSMUST00000106519.8	1475	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTTGTGTACCTTTTT	NA	False	NA	NA	False	NA	NA	NA	119495514	119456547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_119457280_119458602_119459139_119495307
ENSMUST00000106525.9	chr4	+	2792	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_6	11.0657128102983	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAGAATATGTCTTTT	NA	False	NA	141	True	NA	NA	NA	115594940	115631632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ENSMUST00000106530.8	chr11	-	836	5	FSM	ENSMUSG00000020736.13	ENSMUST00000106530.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	83.4487117935322	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGATCTTTGATGCT	NA	False	NA	-8	True	AATAAA	-19	NA	115382641	115381245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115381596_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ENSMUST00000106533.8	chr11	+	2649	5	FSM	ENSMUSG00000016940.19	ENSMUST00000106533.8	2649	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	5.97390157267426	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTCTCCTTCAT	3758	False	NA	28	True	NA	NA	NA	115310975	115322100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105
ENSMUST00000106536.8	chr3	-	1839	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	14.9497457489813	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCTAATTTTTCATTA	NA	False	NA	-1	True	AATAAA	-16	NA	113423798	113399112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ENSMUST00000106539.10	chr11	+	776	5	FSM	ENSMUSG00000018858.16	ENSMUST00000106539.10	2522	5	3	1743	0	0	multi-exon	FALSE	canonical	3	79	junction_2	428.298377302553	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294582	115301745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115294787_115297376_115297414_115300885_115300969_115301057_115301228_115301463
ENSMUST00000106567.2	chr3	-	2450	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTGCTGGGGCTCTATT	NA	False	NA	-12	True	ATTAAA	-19	NA	110158314	110155864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_110155900_110158300
ENSMUST00000106599.8	chr11	+	457	4	FSM	ENSMUSG00000057322.13	ENSMUST00000106599.8	457	4	0	0	0	0	multi-exon	FALSE	canonical	3	12129	junction_3	3589.14031799012	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559434	114563157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000106601.8	chr4	-	3775	7	FSM	ENSMUSG00000028546.18	ENSMUST00000106601.8	3775	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	12.7899700286331	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110149919	110060933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110149831
ENSMUST00000106602.10	chr11	+	371	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	0	0	0	0	multi-exon	FALSE	canonical	3	6598	junction_1	5536.08152825625	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTCCTCAGTCTC	NA	False	NA	28	True	ATTAAA	-15	NA	114559349	114563157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUST00000106603.9	chr4	-	3761	6	FSM	ENSMUSG00000028546.18	ENSMUST00000106603.9	3761	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	6.48074069840786	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCTTCCCAAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110209106	110060933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ENSMUST00000106603.9-0	chr4	-	3190	6	FSM	ENSMUSG00000028546.18	ENSMUST00000106603.9	3761	6	0	571	0	-571	multi-exon	FALSE	canonical	3	15	junction_1	6.48074069840786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTTATTTTGTGCAT	NA	False	NA	2	True	AATAAA	-20	NA	110209106	110061504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110208993
ENSMUST00000106607.2	chr7	+	1153	3	FSM	ENSMUSG00000030663.13	ENSMUST00000106607.2	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	845.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATTGTGATGCCTT	NA	False	NA	26	True	AATAAA	-17	NA	115692575	115704442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_115692623_115702445_115702556_115703446
ENSMUST00000106609.8	chr3	+	2043	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	36.8117839559091	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6596	False	NA	6	True	AATAAA	-18	NA	108561228	108586156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ENSMUST00000106616.2	chr11	-	3405	2	FSM	ENSMUSG00000041598.8	ENSMUST00000106616.2	3405	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGTCTGACTCTTCTT	7926	False	NA	0	True	ATTAAA	-17	NA	113642144	113617675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113620492_113641555
ENSMUST00000106617.8	chr11	-	1123	7	FSM	ENSMUSG00000018727.20	ENSMUST00000106617.8	1123	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	84.0094240745247	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113599793	113588997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113589493_113590661_113590740_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629
ENSMUST00000106621.4	chr11	+	2062	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	30.335622624235	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575272	113585473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUST00000106622.3	chr3	-	2752	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	80.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	5570	False	NA	-14	True	AATAAA	-15	NA	108469486	108463740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108466277_108467502_108467635_108469402
ENSMUST00000106633.10	chr11	-	2688	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	154.822558728882	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUST00000106644.9	chr4	+	3784	33	FSM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_3	173.040085222326	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGACGTGTGTGCAT	NA	False	NA	39	True	AATAAA	-31	NA	108857966	108918358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUST00000106653.4	chr7	+	5540	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_11	29.763171284045	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622710	111710591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUST00000106656.2	chr3	+	5482	2	FSM	ENSMUSG00000050947.10	ENSMUST00000106656.2	5482	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGGTCTGTTTGTCC	559	False	NA	NA	False	CATAAA	-20	NA	108093673	108099602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108093995_108094441
ENSMUST00000106657.8	chr4	-	5008	19	FSM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	60	1391	60	402	multi-exon	FALSE	canonical	2	6	junction_1	6.31771954481311	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTACTTCCTGTACA	694	False	NA	-8	True	AATAAA	-13	NA	108637935	108496053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ENSMUST00000106685.9	chr3	-	1153	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	8.51649060616507	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCCTGTCGTATT	1790	False	NA	-1	True	AGTAAA	-16	NA	107851065	107846162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
ENSMUST00000106690.9	chr4	-	2421	14	FSM	ENSMUSG00000034645.15	ENSMUST00000106690.9	2421	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.6810662641758	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTGTTTTCTTTTAG	5543	False	NA	NA	False	TTTAAA	-19	NA	108075245	108039130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108039319_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ENSMUST00000106701.2	chr4	-	772	5	FSM	ENSMUSG00000028603.16	ENSMUST00000106701.2	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_3	53.5601297608585	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTACTGTGCTTGATG	NA	False	NA	NA	False	NA	NA	NA	107928616	107901746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453
ENSMUST00000106702.4	chr11	+	914	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_2	132.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATGTCCTCTTTTGCA	NA	False	NA	9	True	AATAAA	-18	NA	109253656	109271301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_109254083_109256361_109256589_109271040
ENSMUST00000106722.2	chr7	-	4862	22	FSM	ENSMUSG00000035901.15	ENSMUST00000106722.2	4862	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_21	36.294961951193	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTGGTCACTGGCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	109559607	109492986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109494023_109495449_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109559280
ENSMUST00000106729.8	chr7	-	3563	22	FSM	ENSMUSG00000007279.15	ENSMUST00000106729.8	3563	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_18	1.71560795568113	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTAGAAACAAAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	109464886	109397896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109398613_109399780_109399861_109403814_109403968_109405249_109405448_109407615_109407778_109408284_109408453_109423971_109424179_109424525_109424682_109428241_109428347_109430003_109430088_109430334_109430452_109430873_109430997_109432215_109432333_109436200_109436324_109437286_109437404_109442386_109442477_109443083_109443201_109446129_109446256_109451640_109451776_109456727_109456854_109463311_109463435_109464666
ENSMUST00000106733.10	chr4	+	4528	18	FSM	ENSMUSG00000028613.16	ENSMUST00000106733.10	3333	18	-113	-1082	0	0	multi-exon	FALSE	canonical	2	4	junction_5	24.7261821364517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659360	107731096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
ENSMUST00000106736.3	chr3	+	1669	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-43	NA	106629208	106643893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_106629423_106641673_106641956_106642720
ENSMUST00000106746.8	chr11	+	6276	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	-12	6883	0	0	multi-exon	FALSE	canonical	3	95	junction_1	34.694973856994	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438781	107577769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ENSMUST00000106749.8	chr4	+	607	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	69.6746725862418	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTTTTTTTATATAA	NA	False	NA	8	True	ATTAAA	-19	NA	107111099	107137135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUST00000106752.10	chr11	+	1955	11	FSM	ENSMUSG00000020720.14	ENSMUST00000106752.10	1955	11	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_10	842.895657836722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGTTCCAGACCTGAG	NA	False	NA	NA	False	ATTAAA	-16	NA	107370353	107395188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107394443
ENSMUST00000106757.8	chr11	-	3098	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGAAAATGTCTCTC	1101	False	NA	NA	False	TATAAA	-12	NA	107080207	107057488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUST00000106757.8-0	chr11	-	2751	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	79	268	50	-268	multi-exon	FALSE	canonical	3	50	junction_5	109.451004980994	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGCTGCAAAACATC	1180	False	NA	NA	False	NA	NA	NA	107080128	107057756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUST00000106768.2	chr11	-	541	3	FSM	ENSMUSG00000018362.15	ENSMUST00000106768.2	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	2432	junction_2	347.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATATAGTTCCTGGT	9838	False	NA	NA	False	NA	NA	NA	106890195	106887040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106887473_106888063_106888162_106890184
ENSMUST00000106774.8	chr3	-	3718	21	FSM	ENSMUSG00000002227.16	ENSMUST00000106774.8	3718	21	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_17	372.241249057651	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725879	104702151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711702_104711786_104712030_104712219_104712424_104725251_104725473_104725573
ENSMUST00000106775.8	chr3	-	3584	21	FSM	ENSMUSG00000002227.16	ENSMUST00000106775.8	3584	21	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_20	389.298458769104	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725879	104702151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711702_104711786_104712030_104712219_104712424_104725251_104725438_104725672
ENSMUST00000106781.2	chr4	+	3046	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106781.2	3046	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	False	NA	3	True	AATAAA	-18	NA	106508294	106512477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106508329_106509465
ENSMUST00000106782.2	chr4	+	2208	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106782.2	502	2	37	-1743	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508302	106512479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106508346_106510314
ENSMUST00000106783.8	chr7	+	3273	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	22.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTTCCTTTCTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	105289262	105292844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_105289830_105289968_105290065_105290234
ENSMUST00000106787.8	chr3	+	959	5	FSM	ENSMUSG00000002233.14	ENSMUST00000106787.8	959	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	97.4586450757448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGCTCACAGGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	104696349	104701660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_104696418_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUST00000106788.2	chr4	-	1569	10	FSM	ENSMUSG00000054362.10	ENSMUST00000106788.2	1569	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.98145281497545	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTGAAGCTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	106474435	106448506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106448885_106464485_106464620_106467596_106467723_106468609_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535_106472701_106473098_106473187_106474321
ENSMUST00000106789.8	chr7	-	2841	12	FSM	ENSMUSG00000036989.17	ENSMUST00000106789.8	2841	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	7.22140985754018	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTAGGTTCTTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	105282744	105259854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
ENSMUST00000106796.9	chr11	-	3441	16	FSM	ENSMUSG00000020717.20	ENSMUST00000106796.9	3441	16	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	373.181135643269	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	9424	False	NA	-10	True	AATAAA	-18	NA	106606220	106545043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844
ENSMUST00000106843.8	chr11	-	2548	12	FSM	ENSMUSG00000078619.11	ENSMUST00000106843.8	2548	12	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_5	34.9963398322295	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGACCTGGTCATTGA	2949	False	NA	-7	True	AATAAA	-20	NA	106158625	106154004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159
ENSMUST00000106857.8	chr4	+	4752	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	18.0662361572323	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGTGTGGTGTCTAGTT	343	False	NA	15	True	ATTAAA	-16	NA	102976482	103022949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ENSMUST00000106858.8	chr4	+	4830	15	FSM	ENSMUSG00000028522.17	ENSMUST00000106858.8	4830	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	48.3934238237775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGGTGTCTAGTTAT	2517	False	NA	17	True	ATTAAA	-18	NA	102971591	103022951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_102971717_102972756_102972858_102975438_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ENSMUST00000106860.6	chr3	+	5025	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTTGGGTTGTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	103187194	103262878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ENSMUST00000106860.6-0	chr3	+	8344	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	-106	-3213	-106	0	multi-exon	FALSE	canonical	3	12	junction_18	26.2196914974647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTCTTTTTGAGACC	NA	False	NA	NA	False	ATTAAA	-32	NA	103187088	103266091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ENSMUST00000106867.2	chr11	-	3386	2	FSM	ENSMUSG00000069631.15	ENSMUST00000106867.2	3386	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAATCTATCA	NA	False	NA	NA	False	AATAGA	-4	NA	106084398	106074727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106078007_106084291
ENSMUST00000106921.9	chr4	+	5542	19	FSM	ENSMUSG00000057722.18	ENSMUST00000106921.9	5542	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.86007433808702	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTTTTGTGCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	101574600	101670864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_101575136_101585206_101585267_101590463_101590794_101592756_101592881_101602707_101602914_101607483_101607627_101609257_101609403_101622057_101622349_101622500_101622619_101625243_101625444_101628493_101628643_101630032_101630193_101631397_101631481_101637101_101637319_101639741_101639925_101646459_101646556_101647997_101648104_101649191_101649268_101668544
ENSMUST00000106929.10	chr4	+	5128	19	FSM	ENSMUSG00000028528.18	ENSMUST00000106929.10	5128	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	26.7460046629791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTAGAAATATACATTA	9325	False	NA	6	True	ATTAAA	-14	NA	101365196	101499995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_101365380_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ENSMUST00000106930.8	chr4	+	5127	20	FSM	ENSMUSG00000028528.18	ENSMUST00000106930.8	5127	20	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	19.3392228428705	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	7	True	ATTAAA	-15	NA	101353844	101499996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_101353961_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
ENSMUST00000106941.9	chr11	+	3699	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	59.3191529336175	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072352	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ENSMUST00000106946.8	chr4	+	4360	6	FSM	ENSMUSG00000028527.19	ENSMUST00000106946.8	4360	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	102.253410701062	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101276485	101324192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_101276754_101276925_101277163_101304356_101304477_101317696_101317870_101320145_101320265_101320749
ENSMUST00000106971.2	chr11	-	5222	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106971.2	5222	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	64.3563500823219	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAAAATGAAAAAAA	8758	False	NA	-46	True	NA	NA	NA	104332528	104224370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332122
ENSMUST00000106972.8	chr11	-	5427	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106972.8	5427	15	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_14	49.1984735120752	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8169	False	NA	-2	True	NA	NA	NA	104333117	104224326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ENSMUST00000106973.8	chr7	+	650	5	FSM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	224.489420686143	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCAGGTGTGGTCCCT	7825	False	NA	-39	True	NA	NA	NA	101545622	101548687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUST00000106977.8	chr11	-	5510	14	FSM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	53.9110597824222	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATCAATGGAAGTAAGT	8169	False	NA	NA	False	NA	NA	NA	104333117	104224054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ENSMUST00000106981.8	chr7	-	960	4	FSM	ENSMUSG00000001827.13	ENSMUST00000106981.8	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	18.9267594221045	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	8098	False	NA	0	True	AATAAA	-31	NA	101513352	101507537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131
ENSMUST00000106982.8	chr7	-	1039	5	FSM	ENSMUSG00000001827.13	ENSMUST00000106982.8	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	136.80711787038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	4836	False	NA	0	True	AATAAA	-31	NA	101516614	101507537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101516484
ENSMUST00000106985.8	chr7	-	1313	7	FSM	ENSMUSG00000001827.13	ENSMUST00000106985.8	1313	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	147.824219937059	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	1536	False	NA	0	True	AATAAA	-31	NA	101519914	101507537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517762_101518363_101518512_101519815
ENSMUST00000106986.9	chr7	-	1286	7	FSM	ENSMUSG00000001827.13	ENSMUST00000106986.9	1286	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	140.150415229099	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	1560	False	NA	0	True	AATAAA	-31	NA	101519890	101507537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518363_101518512_101519815
ENSMUST00000106997.2	chr3	+	2014	13	FSM	ENSMUSG00000027865.11	ENSMUST00000106997.2	2014	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_11	11.971029845237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100069833	100109786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289
ENSMUST00000106998.8	chr7	+	2287	17	FSM	ENSMUSG00000001829.18	ENSMUST00000106998.8	2287	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	246.748226943984	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCCACCTTGCCCTCAT	NA	False	NA	18	True	AATAAA	-24	NA	101312911	101437017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101360617_101360708_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUST00000107004.9	chr4	+	766	8	FSM	ENSMUSG00000073792.12	ENSMUST00000107004.9	766	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	67.3286184110654	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCAAACCAATTTCCA	NA	False	NA	NA	False	NA	NA	NA	99603912	99641122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053
ENSMUST00000107010.9	chr7	+	5147	34	FSM	ENSMUSG00000032812.19	ENSMUST00000107010.9	5147	34	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	24.8085044217444	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATG	NA	False	NA	18	True	TATAAA	-23	NA	100997273	101061101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ENSMUST00000107013.3	chr11	-	2925	5	FSM	ENSMUSG00000020946.14	ENSMUST00000107013.3	1044	5	-4	-1877	0	0	multi-exon	TRUE	canonical	3	79	junction_1	134.545531326759	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	False	NA	2	True	AATAAA	-31	NA	103588524	103567674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_103570224_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUST00000107024.8	chr11	-	3976	16	ISM	ENSMUSG00000034255.19	ENSMUST00000107024.9	4261	18	2507	0	2507	0	3prime_fragment	TRUE	canonical	2	3	junction_6	4.91075916285411	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCGAATGTACTCTGG	NA	False	NA	0	True	NA	NA	NA	103251726	103222322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229582_103229850_103229935_103230021_103230103_103230280_103230464_103230810_103231231_103251072
ENSMUST00000107032.3	chr7	-	7860	21	FSM	ENSMUSG00000032875.9	ENSMUST00000107032.3	10190	21	-53	2383	-53	0	multi-exon	FALSE	canonical	2	6	junction_5	4.18658572108586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATGGCTCCCCCGGGC	9490	False	NA	-13	True	AATAAA	-11	NA	100581367	100521341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100577775
ENSMUST00000107037.8	chr11	+	1875	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	31	-685	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGAACTTGTGGCCTG	NA	False	NA	-10	True	NA	NA	NA	103024170	103030702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_103024249_103024860_103024968_103029012
ENSMUST00000107041.5	chr7	+	1232	1	FSM	ENSMUSG00000078636.5	ENSMUST00000107041.5	1232	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7470	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	51396394	51397626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_51396400_51397600
ENSMUST00000107044.10	chr7	-	1806	7	FSM	ENSMUSG00000030701.18	ENSMUST00000107044.10	1806	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.3365372770859	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGGCTTTGCTTGTTT	NA	False	NA	-2	True	AATAAA	-16	NA	100307663	100293106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100304455_100304609_100305941_100306018_100307499
ENSMUST00000107060.8	chr11	-	3339	28	FSM	ENSMUSG00000020929.15	ENSMUST00000107060.8	3339	28	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_26	289.083827865911	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGTTTGCTGCTTTC	8448	False	NA	-5	True	TATAAA	-22	NA	102771811	102729298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762009_102768435_102768545_102771720
ENSMUST00000107075.9	chr11	-	2314	3	FSM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTTAAAGGGTAATGT	2006	False	NA	-8	True	ATTAAA	-22	NA	102695727	102690404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102692022_102693666_102693743_102695106
ENSMUST00000107076.10	chr3	+	2858	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	28.3212760050852	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCGTCATGGAGGGGA	2588	False	NA	5	True	AATAAA	-15	NA	96603699	96613278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUST00000107077.4	chr3	+	2695	15	FSM	ENSMUSG00000028101.19	ENSMUST00000107077.4	2695	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	45.7727304969111	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGGAAGGGATGTTGT	3321	False	NA	16	True	AATAAA	-26	NA	96604432	96613289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96604512_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUST00000107086.9	chr7	-	3993	14	FSM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.29225606550021	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCCTTCTAAACTGCAT	8212	False	NA	NA	False	ATTAAA	-36	NA	99345016	99307595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99338069_99338233_99339638_99339777_99340963_99341101_99344741
ENSMUST00000107094.2	chr4	-	3189	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTCCCTTTGCTAAT	5509	False	NA	NA	False	AATAAA	-33	NA	94940459	94937270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_94937300_94940500
ENSMUST00000107098.8	chr11	-	1606	12	FSM	ENSMUSG00000018677.10	ENSMUST00000107098.8	1606	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	1380.93231173247	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAAAAAAAAACCAA	7743	False	NA	NA	False	NA	NA	NA	102298315	102293810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296629_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUST00000107100.3	chr7	+	2335	3	FSM	ENSMUSG00000055407.15	ENSMUST00000107100.3	2335	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	18	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	False	NA	13	True	AATAAA	-19	NA	98917552	98986344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_98918521_98964895_98965110_98985191
ENSMUST00000107102.8	chr11	+	1837	11	FSM	ENSMUSG00000006575.15	ENSMUST00000107102.8	1837	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_10	57.4930430573996	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGGGAGACAGAGACAT	7409	False	NA	11	True	NA	NA	NA	102284228	102292580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
ENSMUST00000107103.8	chr11	+	1822	11	FSM	ENSMUSG00000006575.15	ENSMUST00000107103.8	1822	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	76.5477628673758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGGGAGACAGAGACAT	7409	False	NA	11	True	NA	NA	NA	102284228	102292580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102284609_102288396_102288513_102288925_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292214
ENSMUST00000107107.9	chr4	-	2784	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_12	53.7532164993284	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491481	94457403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ENSMUST00000107110.8	chr4	-	3671	6	FSM	ENSMUSG00000008489.19	ENSMUST00000107110.8	3671	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	41.6461282714252	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTATCTTTAAATACAT	NA	False	NA	2	True	AATAAA	-20	NA	91260271	91138999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_91141808_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ENSMUST00000107112.2	chr7	-	2232	13	FSM	ENSMUSG00000035547.15	ENSMUST00000107112.2	2232	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	45.8223471681668	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTAATGCAGTTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	97811549	97772867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97811482
ENSMUST00000107115.8	chr11	-	3199	19	FSM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_13	159.309621666601	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCTA	9137	False	NA	60	True	NA	NA	NA	102207530	102196749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ENSMUST00000107117.9	chr11	-	3258	20	FSM	ENSMUSG00000020923.18	ENSMUST00000107117.9	3258	20	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_19	213.309601634771	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTCTA	7970	False	NA	60	True	NA	NA	NA	102208697	102196749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
ENSMUST00000107119.9	chr11	-	3013	20	FSM	ENSMUSG00000020923.18	ENSMUST00000107119.9	3013	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_19	227.252992142399	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	8554	False	NA	-9	True	NA	NA	NA	102208113	102196818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102207999
ENSMUST00000107123.10	chr11	-	3300	21	FSM	ENSMUSG00000020923.18	ENSMUST00000107123.10	2759	21	-236	-305	0	0	multi-exon	FALSE	canonical	3	90	junction_20	173.298954122637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	7970	False	NA	-9	True	NA	NA	NA	102208697	102196818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
ENSMUST00000107132.3	chr11	-	3706	13	FSM	ENSMUSG00000059995.13	ENSMUST00000107132.3	3706	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	41.9393576753653	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGGCCTGCCCACTCTC	NA	False	NA	-7	True	AATAAA	-18	NA	102187455	102180126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774_102185886_102187228
ENSMUST00000107150.8	chr11	-	3759	27	FSM	ENSMUSG00000008855.18	ENSMUST00000107150.8	3759	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.5686601715956	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACGTGTGCCGTGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	102120962	102086576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102086695_102086773_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ENSMUST00000107152.9	chr11	-	3788	27	FSM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_25	47.7576630363989	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAACGTGTGCCGTGTG	NA	False	NA	-7	True	ATTAAA	-18	NA	102120992	102086576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ENSMUST00000107153.3	chr7	+	4756	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	10	6358	0	0	multi-exon	FALSE	canonical	3	100	junction_2	14.120749114532	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGGCATAGATGATGAT	NA	False	NA	7	True	ATTAAA	-20	NA	97229113	97335627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ENSMUST00000107154.4	chr3	+	1444	16	FSM	ENSMUSG00000028109.15	ENSMUST00000107154.4	1444	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	107.711260114974	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466988	95494907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95467044_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95492845_95492901_95494691
ENSMUST00000107156.9	chr11	-	2015	4	FSM	ENSMUSG00000020922.12	ENSMUST00000107156.9	2015	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	445.4737802485	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGTCTCAGGTTTGTGC	6423	False	NA	-1	True	AATAAA	-23	NA	102076055	102053322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102075948
ENSMUST00000107170.3	chr3	-	4622	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1642	False	NA	-4	True	ATTAAA	-15	NA	95264513	95230835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ENSMUST00000107170.3-0	chr3	-	4383	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	2	237	0	-237	multi-exon	FALSE	canonical	3	141	junction_11	31.3428122874475	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGATTGTGGTTTGTCTT	1644	False	NA	-20	True	NA	NA	NA	95264511	95231072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ENSMUST00000107171.10	chr3	-	4573	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107171.10	4573	22	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	47.7030211966969	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1688	False	NA	-4	True	ATTAAA	-15	NA	95264467	95230835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ENSMUST00000107180.8	chr7	+	1406	4	FSM	ENSMUSG00000030643.15	ENSMUST00000107180.8	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.98887651569859	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTCAGCAGTCTTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	92469112	92485855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUST00000107187.9	chr3	+	2827	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	26.9118359384908	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTTCCTACCTTGGAG	NA	False	NA	15	True	AATAAA	-16	NA	95190254	95203477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUST00000107197.2	chr3	-	754	3	FSM	ENSMUSG00000068860.6	ENSMUST00000107197.2	1289	3	535	0	535	0	multi-exon	FALSE	canonical	3	16	junction_2	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGTCTCATTTTTCT	NA	False	NA	-1	True	AATATA	-21	NA	95148374	95144417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95144541_95147260_95147423_95147905
ENSMUST00000107198.9	chr4	-	3844	7	FSM	ENSMUSG00000028487.19	ENSMUST00000107198.9	3948	7	-19	123	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2.98142396999972	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAACAAAAAGGAAC	NA	False	NA	NA	False	AATAAA	-22	NA	84593323	84193588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
ENSMUST00000107208.8	chr11	+	4344	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107208.8	4344	23	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_22	52.5711049377904	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	978	False	NA	21	True	AATAAA	-24	NA	101443683	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
ENSMUST00000107209.8	chr3	-	8357	9	FSM	ENSMUSG00000038766.17	ENSMUST00000107209.8	8357	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	6.12244844812923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTATTGTTGAATTCT	8983	False	NA	-22	True	AATAAA	-18	NA	95125020	95089076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95123524_95123580_95124899
ENSMUST00000107213.8	chr11	+	4339	23	FSM	ENSMUSG00000017119.21	ENSMUST00000107213.8	4339	23	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_16	37.5030852725303	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	978	False	NA	21	True	AATAAA	-24	NA	101443683	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
ENSMUST00000107214.9	chr4	-	1973	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	501.525034270474	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404690	83380107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ENSMUST00000107215.9	chr4	-	1898	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	432.133081353418	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404695	83380107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ENSMUST00000107229.2	chr3	-	724	2	FSM	ENSMUSG00000028126.17	ENSMUST00000107229.2	724	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCTTGTAGAGGAGTTG	1305	False	NA	NA	False	AATAAA	-33	NA	95014134	95004353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95004630_95013686
ENSMUST00000107234.3	chr7	-	2067	12	FSM	ENSMUSG00000030619.11	ENSMUST00000107234.3	2067	12	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTAGAAAGCTATTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	89630191	89603861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUST00000107234.3-0	chr7	-	1566	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	143	-206	0	-71	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89629767	89603938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUST00000107237.8	chr3	-	1332	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	333.422654699207	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATAGTGATAGCTTTG	NA	False	NA	-10	True	AATAAA	-25	NA	94949925	94940004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUST00000107249.8	chr11	+	732	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	0	0	0	0	multi-exon	FALSE	canonical	3	8302	junction_3	2031.83972465022	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2389	False	NA	62	True	ATTAAA	-18	NA	101333271	101336355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUST00000107256.4	chr7	+	1577	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAAGGTATTGGGATGT	NA	False	NA	NA	False	NA	NA	NA	88079480	88140780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_88079812_88099688_88099970_88139815
ENSMUST00000107266.8	chr3	+	4100	18	FSM	ENSMUSG00000038902.15	ENSMUST00000107266.8	4100	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	17.1879494279083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGGCTATGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	94745023	94787643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94745052_94761260_94761386_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ENSMUST00000107270.9	chr3	+	6399	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTTAAGTATATC	NA	False	NA	16	True	AATAAA	-18	NA	94744877	94789637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ENSMUST00000107270.9-0	chr3	+	5106	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	-158	1451	-158	0	multi-exon	FALSE	canonical	3	43	junction_5	12.0021860148809	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAATCCCACTGAAC	NA	False	NA	68	True	TATAAA	-11	NA	94744719	94788186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ENSMUST00000107272.7	chr3	-	4963	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107272.7	4963	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	7.64509646767129	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCATTTTTCTG	NA	False	NA	NA	False	ATTAAA	-28	NA	94693774	94667375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685376_94685510_94685581_94685688_94685790_94686460_94687330_94693686
ENSMUST00000107273.9	chr3	-	5016	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107273.9	5016	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	8.61553828846463	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCATTTTTCTG	NA	False	NA	NA	False	ATTAAA	-28	NA	94693803	94667375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685400_94685510_94685581_94685688_94685790_94686460_94687330_94693686
ENSMUST00000107280.11	chr11	+	876	6	FSM	ENSMUSG00000078656.12	ENSMUST00000107280.11	876	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	474.329252734849	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACCCACCTACATGCGCC	NA	False	NA	NA	False	TATAAA	-35	NA	101144560	101150149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101144634_101144856_101145003_101145744_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUST00000107283.8	chr3	-	3531	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	30.5951975921464	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGTACAAAATATAGTA	NA	False	NA	NA	False	NA	NA	NA	94489856	94406619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ENSMUST00000107284.8	chr11	-	4207	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107284.8	4207	21	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_20	14.6399282785128	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2605	False	NA	-7	True	AATAAA	-15	NA	101117289	101081940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ENSMUST00000107285.8	chr11	-	4193	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_20	14.6399282785128	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCAAGTTGTGTCCT	2618	False	NA	-8	True	AATAAA	-14	NA	101117276	101081941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ENSMUST00000107295.10	chr11	-	3179	8	FSM	ENSMUSG00000017802.15	ENSMUST00000107295.10	3179	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	32.1222155944119	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCAATTGTTATTTTT	9845	False	NA	NA	False	CATAAA	-22	NA	101010669	100987147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100994715_100994747_100997132_100997240_101010366
ENSMUST00000107302.8	chr11	+	1826	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.1912097446562	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTTTAAGTCCTTGT	8223	False	NA	18	True	AATAAA	-22	NA	100978102	100983033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUST00000107305.8	chr7	-	5887	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTTGTGACTGTCAGAA	NA	False	NA	-2	True	AATAAA	-14	NA	81584221	81530998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ENSMUST00000107305.8-0	chr7	-	3072	6	FSM	ENSMUSG00000025104.14	ENSMUST00000107305.8	5887	6	14	2801	0	-2801	multi-exon	FALSE	canonical	3	38	junction_1	4.22374241638857	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTATTGAAGGTATAC	NA	False	NA	NA	False	AATAAA	-25	NA	81584207	81533799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ENSMUST00000107308.4	chr11	+	2386	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	20.9388992069784	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3571	False	NA	25	True	ATTAAA	-16	NA	100973450	100977445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUST00000107335.2	chr3	+	926	3	FSM	ENSMUSG00000074457.11	ENSMUST00000107335.2	926	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAACCTCTTAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	90444621	90450321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90444725_90449306_90449480_90449671
ENSMUST00000107337.8	chr4	-	2067	7	FSM	ENSMUSG00000008305.19	ENSMUST00000107337.8	2067	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	41.6959896819293	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCCTGTGTTCTAATTA	NA	False	NA	0	True	AATAAA	-20	NA	72119099	72075816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUST00000107340.2	chr3	-	577	3	FSM	ENSMUSG00000044080.10	ENSMUST00000107340.2	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	187.5	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCAATGTCTGTACCCT	NA	False	NA	-6	True	AATAAA	-17	NA	90421585	90418343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90418672_90419285_90419457_90421507
ENSMUST00000107342.2	chr3	-	2411	4	FSM	ENSMUSG00000001017.16	ENSMUST00000107342.2	2411	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	627.621435792841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416792	90407001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90407415_90410402_90410587_90413414_90414934_90416497
ENSMUST00000107343.8	chr3	-	3118	4	FSM	ENSMUSG00000001017.16	ENSMUST00000107343.8	3118	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	621.962664117032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416757	90406262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90407415_90410402_90410590_90413414_90414934_90416497
ENSMUST00000107344.8	chr3	-	2972	6	FSM	ENSMUSG00000001017.16	ENSMUST00000107344.8	2972	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	549.872130590376	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416759	90406262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414566_90414851_90414934_90416497
ENSMUST00000107346.8	chr3	-	1321	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	566.644233624591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACATCTTTCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	90416781	90406800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUST00000107353.3	chr7	+	7297	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTCATGTTCTGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	80643428	80694912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ENSMUST00000107353.3-1	chr7	+	4852	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	0	2445	0	1266	multi-exon	FALSE	canonical	3	63	junction_1	16.7715220125451	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGCTCTTGTATTCCTC	NA	False	NA	14	True	AATAAA	-19	NA	80643428	80692467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ENSMUST00000107358.9	chr11	-	5213	19	FSM	ENSMUSG00000020919.12	ENSMUST00000107358.9	5213	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	15.2857554928651	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGAGTCCTGTTTCCTTT	7963	False	NA	0	True	AATAAA	-21	NA	100713354	100671556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100712877
ENSMUST00000107362.10	chr7	-	4166	16	FSM	ENSMUSG00000030530.16	ENSMUST00000107362.10	4166	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	23.6761483354029	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	1010	False	NA	0	True	ATTAAA	-22	NA	80055179	80038941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80055066
ENSMUST00000107364.8	chr11	-	1915	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGATTGTTGGTGTCT	NA	False	NA	-10	True	ATTAAA	-17	NA	100629041	100605834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUST00000107364.8-0	chr11	-	1657	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	0	258	0	-256	multi-exon	FALSE	canonical	3	116	junction_2	14.961283367412	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTTGTCTTCCTCGTCCT	NA	False	NA	-2	True	AATATA	-22	NA	100629041	100606092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUST00000107366.2	chr4	+	3191	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTCATGTCTTAATT	NA	False	NA	20	True	AATAAA	-21	NA	65523222	65534475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_65523307_65531368
ENSMUST00000107384.10	chr7	-	1745	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_5	201.26112391617	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765140	79744593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ENSMUST00000107389.8	chr11	-	4426	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_16	642.699119466695	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGATGCTCTTTTATGTTC	NA	False	NA	-14	True	AATAAA	-18	NA	100418826	100367178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ENSMUST00000107394.3	chr7	+	1424	2	FSM	ENSMUSG00000030543.11	ENSMUST00000107394.3	1944	2	520	0	520	0	multi-exon	FALSE	canonical	3	17	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCTTCTGATTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	79460994	79463187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79461508_79462276
ENSMUST00000107397.2	chr11	-	1348	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	42.2470866040561	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGGATGCACGCGTCTTT	NA	False	NA	-8	True	ATTAAA	-13	NA	100331754	100320184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
ENSMUST00000107403.2	chr11	-	2386	13	FSM	ENSMUSG00000001552.15	ENSMUST00000107403.2	2386	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	143.1885897068	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCCCCTTCCCCACTC	NA	False	NA	NA	False	NA	NA	NA	100288575	100263121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277212_100288446
ENSMUST00000107405.6	chr3	+	3831	15	FSM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	0	2040	0	0	multi-exon	FALSE	canonical	3	12	junction_1	32.9626411909864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATATGTAGCACAGACA	NA	False	NA	20	True	ATTAAA	-20	NA	89638054	89658713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUST00000107406.2	chr11	-	1062	5	FSM	ENSMUSG00000053654.8	ENSMUST00000107406.2	1062	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3688170009021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCATCATTTGTCCTGT	NA	False	NA	-6	True	AATAAA	-23	NA	100156804	100153707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425
ENSMUST00000107409.5	chr7	-	2008	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	0	0	0	0	multi-exon	TRUE	canonical	3	790	junction_6	144.155948541848	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTGCCTCCTCATTG	NA	False	NA	-5	True	AATACA	-19	NA	78798801	78783515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
ENSMUST00000107417.9	chr3	+	3079	13	FSM	ENSMUSG00000042626.14	ENSMUST00000107417.9	3079	13	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGCCTCTCAACTCCTC	NA	False	NA	20	True	ATTAAA	-17	NA	89325920	89337322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUST00000107421.8	chr7	+	2007	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	165.023903992388	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGGTCCTTTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	78545681	78558129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
ENSMUST00000107423.2	chr7	+	2230	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	306.901721511409	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGAACTGGTCCTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	78545756	78558126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
ENSMUST00000107425.8	chr7	+	4956	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTAATCTGATGGAAT	NA	False	NA	2	True	NA	NA	NA	78545674	78560957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
ENSMUST00000107425.8-0	chr7	+	2104	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	24	2828	0	0	multi-exon	FALSE	canonical	3	272	junction_1	184.819431397844	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGGTCCTTTCTGG	NA	False	NA	NA	False	AATAAA	-18	NA	78545698	78558129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
ENSMUST00000107426.8	chr3	-	1824	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	-1	415	0	-415	multi-exon	FALSE	canonical	3	53	junction_7	99.0019583397321	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3737	False	NA	-15	True	AGTAAA	-18	NA	89319177	89310388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
ENSMUST00000107432.8	chr3	-	3639	3	FSM	ENSMUSG00000028042.16	ENSMUST00000107432.8	3639	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	17.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCCACTTTTGGTTC	NA	False	NA	-9	True	AAGAAA	-23	NA	89299376	89284950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89287302_89287650_89288823_89299260
ENSMUST00000107444.8	chr4	-	1247	12	FSM	ENSMUSG00000028393.11	ENSMUST00000107444.8	1247	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	192.970301316246	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCCCTCTTCCTGC	NA	False	NA	-1	True	AGTAAA	-18	NA	62438131	62427405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438031
ENSMUST00000107448.9	chr3	-	2893	22	FSM	ENSMUSG00000028041.18	ENSMUST00000107448.9	2893	22	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	33.3036602620203	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCTGGAAGCTGGGT	NA	False	NA	-11	True	AATAAA	-20	NA	89257296	89246946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUST00000107449.4	chr4	+	2167	6	FSM	ENSMUSG00000028392.16	ENSMUST00000107449.4	2167	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	4.63033476111609	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTTTGCTGGTAACTG	9556	False	NA	28	True	AATAAA	-39	NA	62398289	62415535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62398675_62400854_62400954_62404649_62404881_62406422_62406449_62412969_62413095_62414234
ENSMUST00000107456.4	chr7	+	2683	3	FSM	ENSMUSG00000078670.4	ENSMUST00000107456.4	2683	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	1.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGAGTCACGAGTGTGCT	NA	False	NA	NA	False	AATAAA	-32	NA	73390049	73426667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_73390577_73416234_73416367_73424643
ENSMUST00000107459.2	chr4	-	654	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTTAACTGATTTTTG	2681	False	NA	NA	False	NA	NA	NA	62326862	62312870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62313259_62320960_62321153_62326788
ENSMUST00000107459.2-0	chr4	-	1481	3	FSM	ENSMUSG00000066149.12	ENSMUST00000107459.2	654	3	0	-827	0	776	multi-exon	FALSE	canonical	3	31	junction_2	175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAGACTCTTTATTAT	2681	False	NA	NA	False	AATAAA	-20	NA	62326862	62312043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62313259_62320960_62321153_62326788
ENSMUST00000107461.2	chr4	-	2337	19	FSM	ENSMUSG00000066151.13	ENSMUST00000107461.2	2337	19	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	12.2877033786216	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAACAAAAA	6930	False	NA	NA	False	NA	NA	NA	62278771	62238878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ENSMUST00000107471.8	chr7	+	2216	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	12.2429571591181	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTGTGTTTGAAA	NA	False	NA	13	True	AATAAA	-18	NA	67297172	67376324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ENSMUST00000107473.3	chr11	+	3238	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGCCTCTCTGCCT	7438	False	NA	14	True	AATAAA	-19	NA	98851237	98865768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUST00000107473.3-0	chr11	+	2458	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	0	780	0	0	multi-exon	FALSE	canonical	3	97	junction_1	54.9043695521437	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	7438	False	NA	6	True	NA	NA	NA	98851237	98864988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUST00000107474.8	chr11	+	2380	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	8806	False	NA	6	True	NA	NA	NA	98818643	98864988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUST00000107474.8-0	chr11	+	3160	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107474.8	2380	9	0	-780	0	0	multi-exon	FALSE	canonical	3	15	junction_1	86.2060576467803	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGCCTCTCTGCCT	8806	False	NA	14	True	AATAAA	-19	NA	98818643	98865768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98818737_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUST00000107475.9	chr11	+	2469	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	NA	False	NA	6	True	NA	NA	NA	98828523	98864988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUST00000107475.9-0	chr11	+	3249	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	0	-780	0	0	multi-exon	FALSE	canonical	3	106	junction_2	61.7220331405245	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTGCCTCTCTGCCT	NA	False	NA	14	True	AATAAA	-19	NA	98828523	98865768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUST00000107476.8	chr7	-	4759	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	5.22015325445528	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAGAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67022606	66881665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ENSMUST00000107485.8	chr11	+	2091	3	FSM	ENSMUSG00000052915.15	ENSMUST00000107485.8	2091	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	7.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGACTATCTTGGGATAT	605	False	NA	NA	False	AATAAA	-28	NA	98686616	98691878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98687431_98689965_98690190_98690825
ENSMUST00000107491.11	chr3	-	1375	12	FSM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	248.490151458566	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUST00000107494.8	chr3	-	2093	15	FSM	ENSMUSG00000068922.15	ENSMUST00000107494.8	2093	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	254.728036244501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAACTCGATGCACAAG	NA	False	NA	NA	False	AATAAA	-19	NA	88821238	88812413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88812828_88817045_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820231_88820873_88821010_88821099
ENSMUST00000107495.5	chr7	+	1003	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	226.65709783724	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAACTTTTTATTTGCCTG	NA	False	NA	28	True	AATAAA	-28	NA	65343164	65351661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUST00000107510.10	chr3	+	4390	22	FSM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	68.5955314781911	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGGAAATGAAGCGCC	NA	False	NA	13	True	ATTAAA	-15	NA	88528598	88555357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000107526.8	chr4	-	1438	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTTTGTAAGGATCCT	30	True	NA	-6	True	ATTAAA	-18	NA	59783808	59771296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ENSMUST00000107526.8-0	chr4	-	3139	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	-41	-1660	0	0	multi-exon	FALSE	canonical	3	138	junction_3	91.8416511659546	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTACTGCATATGTTAA	-11	True	NA	NA	False	NA	NA	NA	59783849	59769636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ENSMUST00000107537.5	chr7	+	4911	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATTTGTGTTCTTCAG	NA	False	NA	7	True	AATAAA	-7	NA	58878498	58956475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUST00000107537.5-0	chr7	+	3077	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	51	1783	0	0	multi-exon	FALSE	canonical	3	99	junction_1	51.6876194073591	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAGAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	58878549	58954692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUST00000107538.2	chr11	+	5143	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107538.2	5143	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	22.2330315590945	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTTGACAAAAGTTAT	NA	False	NA	-1	True	AATAAA	-17	NA	98094160	98141870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ENSMUST00000107539.8	chr11	+	5912	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_13	16.8635316059493	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAGAAAACT	NA	False	NA	NA	False	NA	NA	NA	98093884	98142390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ENSMUST00000107542.2	chr3	-	2051	6	FSM	ENSMUSG00000074489.10	ENSMUST00000107542.2	2051	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	10.571660229122	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTGGGCTGGAGTCTG	7128	False	NA	NA	False	AATAAA	-13	NA	88280050	88275928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88277434_88278787_88279845
ENSMUST00000107544.2	chr4	-	3220	17	FSM	ENSMUSG00000038578.16	ENSMUST00000107544.2	3220	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	23.1313335921213	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCCATTCCTCTTTTT	31	False	NA	NA	False	NA	NA	NA	59438633	59314753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427954_59428065_59438205
ENSMUST00000107545.9	chr11	-	8024	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	32.1266414950271	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTCTGTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-41	NA	98084119	98042980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUST00000107553.8	chr3	-	2053	4	FSM	ENSMUSG00000001420.14	ENSMUST00000107553.8	2053	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.48528137423857	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGGCTCGTTCATT	NA	False	NA	NA	False	AATAAA	-11	NA	88241575	88236352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88237240_88239746_88239961_88240198_88240990_88241414
ENSMUST00000107562.2	chr11	-	1745	13	FSM	ENSMUSG00000020882.18	ENSMUST00000107562.2	1745	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	26.3358384884341	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913460	97895750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUST00000107565.3	chr11	-	2439	14	FSM	ENSMUSG00000017417.15	ENSMUST00000107565.3	2439	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	10.3877488150122	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGTGCTCA	6905	False	NA	NA	False	ATTAAA	-13	NA	97877225	97814481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97815434_97816638_97816800_97819259_97819296_97823032_97823166_97824800_97824862_97829355_97829438_97831638_97831735_97844708_97844809_97845576_97845696_97846226_97846350_97846924_97846995_97847248_97847414_97869328_97869508_97877063
ENSMUST00000107570.2	chr4	-	3244	3	FSM	ENSMUSG00000038668.15	ENSMUST00000107570.2	3244	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	125	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	0	True	NA	-5	True	AATAAA	-22	NA	58499403	58435254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_58437635_58486476_58487225_58499287
ENSMUST00000107571.8	chr4	-	3543	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107571.8	3543	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.608795275526	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	5	True	NA	-5	True	AATAAA	-22	NA	58553311	58435254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_58437635_58486476_58487225_58504621_58504859_58553133
ENSMUST00000107575.9	chr4	-	3421	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107575.9	3421	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_3	114.601725796585	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	205	False	NA	-5	True	AATAAA	-22	NA	58553553	58435254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553420
ENSMUST00000107583.3	chr11	+	737	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_1	75.5	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2452	False	NA	-1	True	AATAAA	-21	NA	97576778	97579447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97577042_97577326_97577447_97579093
ENSMUST00000107598.9	chr4	+	4705	4	FSM	ENSMUSG00000038729.25	ENSMUST00000107598.9	6830	4	0	2125	0	-2123	multi-exon	FALSE	canonical	3	16	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTGTTTTTATGTTA	-5	True	NA	18	True	ATTAAA	-18	NA	57845247	57894859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_57845307_57854561_57857038_57883023_57883203_57892868
ENSMUST00000107615.8	chr11	-	3333	9	FSM	ENSMUSG00000038517.16	ENSMUST00000107615.8	3333	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	12.8160056179763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCGCTCAGGCTGTGC	7867	False	NA	-2	True	AATAAA	-17	NA	97040538	97026998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187
ENSMUST00000107618.9	chr3	-	3556	16	FSM	ENSMUSG00000041734.16	ENSMUST00000107618.9	7278	16	47	3675	0	2352	multi-exon	FALSE	canonical	3	30	junction_15	10.3850319637875	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGTAGGGGTTTCCC	NA	False	NA	NA	False	AATAAA	-16	NA	87082007	86989582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
ENSMUST00000107619.3	chr4	-	3029	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_2	61.7267162580353	2916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	9	True	NA	-7	True	AATAAA	-21	NA	55532466	55527142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ENSMUST00000107620.3	chr3	-	1475	3	FSM	ENSMUSG00000028076.13	ENSMUST00000107620.3	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCAGAGGTTTTACTT	NA	False	NA	NA	False	AATAAA	-20	NA	86905254	86903140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86903909_86903996_86904094_86904644
ENSMUST00000107622.2	chr11	+	3621	2	FSM	ENSMUSG00000038560.8	ENSMUST00000107622.2	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACACTCTCGCTTTGT	NA	False	NA	0	True	AATAAA	-10	NA	96909558	96915557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96909854_96912231
ENSMUST00000107623.8	chr11	-	2907	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107623.8	2907	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	176.149242279255	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96859491	96844298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96859413
ENSMUST00000107624.8	chr11	-	3055	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	154.880599172395	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTCTGCGTTTGGCAGT	NA	False	NA	-17	True	AATAAA	-16	NA	96868537	96844166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
ENSMUST00000107646.9	chr4	+	1974	13	FSM	ENSMUSG00000028412.18	ENSMUST00000107646.9	1974	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_12	105.39143308005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCTAAATGTTTACAT	-33	True	NA	NA	False	NA	NA	NA	53440412	53550200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53549988
ENSMUST00000107651.9	chr4	+	4382	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_12	25.9286199658473	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTATGTGTGTAACCAT	138	False	NA	33	True	AATAAA	-33	NA	53440670	53567818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ENSMUST00000107653.8	chr7	-	4702	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107653.8	4702	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	16.3614266184748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAACATGGATATGAGAT	NA	False	NA	-4	True	AATAAA	-20	NA	46445305	46409895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427525_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ENSMUST00000107654.8	chr7	-	4422	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107654.8	4422	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_22	14.2782270816457	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGATATGAGATTTACTT	NA	False	NA	2	True	AATAAA	-26	NA	46445423	46409889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ENSMUST00000107657.8	chr11	-	3869	5	FSM	ENSMUSG00000038615.18	ENSMUST00000107657.8	3869	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	560.391994500278	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATAAACCCCAGCAACA	NA	False	NA	NA	False	NA	NA	NA	96720781	96709007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720648
ENSMUST00000107658.8	chr11	-	4219	4	FSM	ENSMUSG00000038615.18	ENSMUST00000107658.8	4219	4	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_3	297.772844071898	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96718781	96708256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023
ENSMUST00000107659.8	chr11	-	2351	5	FSM	ENSMUSG00000038615.18	ENSMUST00000107659.8	2351	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	555.783849621415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTTTCCTAACCGAGCA	NA	False	NA	-87	True	NA	NA	NA	96718545	96708424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96708757_96710220_96711343_96712076_96712236_96712929_96713146_96718023
ENSMUST00000107661.10	chr11	-	2197	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	17.839419776416	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTGTTGCAATTTG	NA	False	NA	-16	True	AATAAA	-13	NA	96668385	96658702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
ENSMUST00000107665.4	chr4	+	1332	5	FSM	ENSMUSG00000015247.11	ENSMUST00000107665.4	848	5	0	-484	0	0	multi-exon	FALSE	canonical	3	19	junction_3	242.862615484557	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATCAAGTGAGTCTT	2	True	NA	10	True	AATAAA	-21	NA	53011949	53022060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53021110_53021198_53021283
ENSMUST00000107678.8	chr3	+	4073	13	FSM	ENSMUSG00000028086.16	ENSMUST00000107678.8	4073	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	32.4585205386129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84771451	84886505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_84771508_84797401_84797560_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ENSMUST00000107679.8	chr3	+	4473	14	FSM	ENSMUSG00000028086.16	ENSMUST00000107679.8	4473	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	22.7195403737157	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84722574	84886505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_84723077_84771270_84771319_84771443_84771508_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
ENSMUST00000107684.2	chr11	-	596	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	5157	junction_4	2293.78611688187	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCATGTGCCTGTGCCT	3530	False	NA	-9	True	NA	NA	NA	95966445	95963815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
ENSMUST00000107686.8	chr11	-	691	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107686.8	691	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	4410.8346149	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGCCTGTC	3568	False	NA	-6	True	NA	NA	NA	95966407	95963812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966252
ENSMUST00000107691.8	chr3	-	7428	12	FSM	ENSMUSG00000027993.17	ENSMUST00000107691.8	7428	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	27.3305447747744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGAGTGTTTATTCAAC	NA	False	NA	-20	True	AATAAA	-20	NA	84167119	84067746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84166631
ENSMUST00000107692.8	chr3	-	7161	12	FSM	ENSMUSG00000027993.17	ENSMUST00000107692.8	7161	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	28.1116428337071	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGAGTGTTTATTCAACA	8758	False	NA	-19	True	AATAAA	-21	NA	84212116	84067745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84211896
ENSMUST00000107696.2	chr4	+	2965	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	6.5	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAAAAAATGACCT	-39	True	NA	NA	False	AAGAAA	-35	NA	49521216	49531517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_49521596_49522397_49522483_49529016
ENSMUST00000107700.4	chr11	+	849	7	FSM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	239.545866635645	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTTCCCCCAGTAT	3277	False	NA	21	True	AATAAA	-43	NA	95925790	95938256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95938020
ENSMUST00000107704.2	chr4	+	1597	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	75.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTACACTGTGTATGTT	38	True	NA	15	True	NA	NA	NA	48540498	48561919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_48540569_48552379_48552831_48560843
ENSMUST00000107720.9	chr4	+	5770	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTCCTGTTGTATATT	5	True	NA	NA	False	AATAAA	-25	NA	48124925	48186507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ENSMUST00000107720.9-0	chr4	+	2390	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	-11	3391	0	885	multi-exon	FALSE	canonical	3	28	junction_1	8.24621125123532	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTATTTATTTCTTA	-6	True	NA	15	True	ATTAAA	-12	NA	48124914	48183116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ENSMUST00000107722.8	chr11	+	3063	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	21.694853460364	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	False	NA	NA	False	AATAAA	-20	NA	95304923	95384232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUST00000107723.9	chr7	-	1898	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	34.207292919623	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCCTCTGAGCTTCTT	8634	False	NA	-4	True	AATAAA	-31	NA	45480213	45474650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
ENSMUST00000107724.9	chr11	+	2881	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	65.0422170593838	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	False	NA	NA	False	AATAAA	-20	NA	95304905	95384232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUST00000107733.10	chr11	-	3470	14	FSM	ENSMUSG00000038909.17	ENSMUST00000107733.10	3470	14	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_9	177.090656421269	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201072	95165084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ENSMUST00000107734.10	chr11	-	3560	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_10	130.748239149965	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201072	95165084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ENSMUST00000107737.11	chr7	-	3548	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAGCTGGTCTTCAA	3162	False	NA	NA	False	AATAAA	-20	NA	45367426	45358890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
ENSMUST00000107737.11-0	chr7	-	2630	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	100	818	0	0	multi-exon	FALSE	canonical	3	70	junction_6	23.5141801189552	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	3262	False	NA	-24	True	AATAAA	-17	NA	45367326	45359708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
ENSMUST00000107739.8	chr11	-	4636	25	FSM	ENSMUSG00000001507.17	ENSMUST00000107739.8	4636	25	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	7.26566793595438	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTCTGCTCCTACCT	NA	False	NA	0	True	AATAAA	-22	NA	94960024	94935299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537
ENSMUST00000107748.2	chr11	+	3095	9	FSM	ENSMUSG00000038976.13	ENSMUST00000107748.2	3095	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8.14612638006556	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCGCCTGGTTTCTTGA	NA	False	NA	20	True	CATAAA	-16	NA	94886889	94897725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ENSMUST00000107752.12	chr7	+	1400	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	205.455591308682	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGAGTGGTCGTGTCCT	NA	False	NA	10	True	NA	NA	NA	45204316	45216745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ENSMUST00000107770.2	chr4	-	2700	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107770.2	2700	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	51.5344784502162	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACTCCCCAAAACAA	-7	True	NA	NA	False	NA	NA	NA	46138438	46115731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135592_46138379
ENSMUST00000107771.12	chr7	-	1834	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	0	0	0	0	multi-exon	FALSE	canonical	3	1951	junction_14	206.139144605714	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTGCTGTGTCCTCAG	9182	False	NA	-4	True	TATAAA	-15	NA	45084047	45071321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ENSMUST00000107772.8	chr4	-	3726	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	21.9291789378647	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	223	False	NA	-3	True	AATAAA	-25	NA	46138475	46114745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ENSMUST00000107796.8	chr4	-	1932	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	1	2500	0	818	multi-exon	FALSE	canonical	3	68	junction_2	5.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGGGGTTTTAATGCA	-16	True	NA	NA	False	AATAAA	-18	NA	45408760	45398422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_45400180_45404726_45404836_45408694
ENSMUST00000107800.3	chr4	+	983	8	FSM	ENSMUSG00000035601.10	ENSMUST00000107800.3	983	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.220723388746	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGTGAAGTGCCAGAGG	3271	False	NA	NA	False	NA	NA	NA	45300433	45315142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45300628_45301235_45301345_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUST00000107801.10	chr7	+	3396	11	FSM	ENSMUSG00000030796.18	ENSMUST00000107801.10	3396	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	23.9883304963059	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCC	5529	False	NA	NA	False	AATAAA	-13	NA	44865275	44883043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUST00000107802.8	chr3	-	2939	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_2	117	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952088	68942620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_68945342_68951100_68951176_68951945
ENSMUST00000107808.3	chr4	-	679	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107808.3	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGGTTTTGTGTTTT	-10	True	NA	NA	False	AATAAA	-14	NA	45108108	45105211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_45105645_45106838_45106889_45107912
ENSMUST00000107810.3	chr4	-	639	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	2176	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTTTTGTGTTTTTAAT	-16	True	NA	NA	False	AATAAA	-18	NA	45108114	45105207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_45105645_45107912
ENSMUST00000107815.4	chr7	-	2685	16	FSM	ENSMUSG00000007833.16	ENSMUST00000107815.4	2685	16	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_14	34.1011567089577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAAGGCAGTCTTCTTC	9322	False	NA	NA	False	NA	NA	NA	44804008	44791868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ENSMUST00000107817.3	chr4	-	3867	2	FSM	ENSMUSG00000049657.10	ENSMUST00000107817.3	3867	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTGGAGGACAAGCATG	NA	False	NA	NA	False	NA	NA	NA	45012412	44992980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_44995387_45010951
ENSMUST00000107818.9	chr11	+	3487	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_3	18.6061145863396	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCCATTCTCTCTCGTT	3994	False	NA	17	True	ATTAAA	-18	NA	94218826	94232667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
ENSMUST00000107820.2	chr11	-	3478	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_9	26.1850018328748	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212814	94181964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUST00000107821.9	chr11	-	2050	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	26.33172990899	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATGAGGCATACTAG	NA	False	NA	73	True	AATAAA	-27	NA	94212814	94181886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUST00000107824.9	chr4	+	2503	9	FSM	ENSMUSG00000035649.18	ENSMUST00000107824.9	2503	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	42.9270820694815	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTAAATAAATGTGTTTA	-10	True	NA	NA	False	AATAAA	-14	NA	44756567	44932203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_44756693_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
ENSMUST00000107829.9	chr7	+	972	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCCTGGCGCCTCATTG	3058	False	NA	27	True	AATAAA	-18	NA	44711852	44726840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
ENSMUST00000107829.9-0	chr7	+	1699	9	FSM	ENSMUSG00000003421.14	ENSMUST00000107829.9	972	9	67	-794	0	0	multi-exon	FALSE	canonical	3	37	junction_6	164.802912595621	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	3125	False	NA	25	True	NA	NA	NA	44711919	44727634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44726050_44726164_44726244_44726354_44726735
ENSMUST00000107843.11	chr7	-	1508	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_9	1333.46760365597	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635992	44626181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ENSMUST00000107843.11-0	chr7	-	1290	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	212	6	0	0	multi-exon	FALSE	canonical	3	222	junction_9	1333.46760365597	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	False	NA	-36	True	AATAAA	-11	NA	44635780	44626187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ENSMUST00000107845.4	chr4	+	1031	5	FSM	ENSMUSG00000028478.19	ENSMUST00000107845.4	1031	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	565.255860208455	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	8	True	NA	21	True	AATAAA	-21	NA	44012685	44032846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_44013003_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUST00000107853.8	chr11	+	5245	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107853.8	5245	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	36.201657420621	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93776677	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_93776889_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUST00000107854.9	chr11	+	5232	16	FSM	ENSMUSG00000059474.14	ENSMUST00000107854.9	5232	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	35.1887608319601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93777044	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_93777243_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUST00000107857.11	chr7	-	3301	23	FSM	ENSMUSG00000060279.15	ENSMUST00000107857.11	3301	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	144.442358888666	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578850	44549808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551139_44552172_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ENSMUST00000107866.9	chr4	+	5102	13	FSM	ENSMUSG00000078716.11	ENSMUST00000107866.9	5102	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	2.419538523493	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTCCTTCCCTTATCT	197	False	NA	NA	False	AAGAAA	-1	NA	43669505	43692668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43670035_43673899_43674090_43674436_43674645_43680658_43680793_43681045_43681315_43681958_43682285_43685296_43685391_43685525_43685650_43685727_43685871_43686010_43686190_43689426_43689574_43689690_43689808_43690026
ENSMUST00000107868.8	chr11	-	2093	16	FSM	ENSMUSG00000020541.13	ENSMUST00000107868.8	2093	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	62.6969430408426	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTTGTTGTTTTGTC	NA	False	NA	-2	True	ATTAAA	-17	NA	90578427	90536516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_90537136_90537660_90537726_90540173_90540250_90540611_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574157_90575887_90575973_90578338
ENSMUST00000107876.8	chr7	+	1770	17	FSM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	53.8118466859297	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGCCATCTTGCTGGG	9315	False	NA	15	True	AATAAA	-17	NA	44506562	44512074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44506727_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUST00000107882.8	chr7	+	1474	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107882.8	1160	5	358	-672	-20	0	multi-exon	FALSE	canonical	3	55	junction_1	107.27622057101	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGTGAGTTCGTGTTG	2163	False	NA	6	True	ATTAAA	-11	NA	44499410	44504832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44499431_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ENSMUST00000107893.9	chr7	-	1735	3	FSM	ENSMUSG00000038539.16	ENSMUST00000107893.9	1735	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	23.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	8931	False	NA	-1	True	AATAAA	-18	NA	44465082	44461680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44462945_44464412_44464707_44464905
ENSMUST00000107896.10	chr11	+	5590	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_5	154.213123630902	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890201	88911119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ENSMUST00000107903.8	chr11	-	3721	11	FSM	ENSMUSG00000018428.16	ENSMUST00000107903.8	3721	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	272.1683302664	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88742329	88721617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88742176
ENSMUST00000107910.8	chr7	-	1948	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	233.829683717988	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGAGTACAAGCCAT	NA	False	NA	-19	True	AATAAA	-12	NA	44203347	44199058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
ENSMUST00000107911.8	chr7	-	1988	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107911.8	1988	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	219.110209599227	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGAGCCCAGTGTGGA	NA	False	NA	-1	True	AATAAA	-30	NA	44203372	44199040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUST00000107912.8	chr7	-	1839	9	FSM	ENSMUSG00000060601.14	ENSMUST00000107912.8	1839	9	0	0	0	0	multi-exon	TRUE	canonical	3	204	junction_8	169.05356954232	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	0	True	AATAAA	-31	NA	44203110	44199039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002
ENSMUST00000107914.10	chr4	-	1164	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.31503239718152	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGGCCCTTTAAGCCT	9769	False	NA	-14	True	AATAAA	-16	NA	43523595	43514710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUST00000107922.3	chr4	+	865	5	FSM	ENSMUSG00000028461.13	ENSMUST00000107922.3	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_4	11.5433963806152	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTCCTCTGTGCTT	1	True	NA	14	True	AGTAAA	-45	NA	43493388	43495921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508
ENSMUST00000107924.3	chr3	+	3157	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	12.1061967603372	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTGCTTTGTGAAAATG	NA	False	NA	15	True	AATAAA	-18	NA	58484056	58500554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ENSMUST00000107948.8	chr7	+	2908	6	FSM	ENSMUSG00000045411.17	ENSMUST00000107948.8	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	279.671664635515	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTAGGGTGTGCTGTTTG	NA	False	NA	18	True	ATTAAA	-18	NA	43896214	43901737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896248_43896674_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000107949.8	chr7	+	3610	4	FSM	ENSMUSG00000045411.17	ENSMUST00000107949.8	3610	4	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_3	48.6095555306659	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896210	43901736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732
ENSMUST00000107950.9	chr7	+	3336	5	FSM	ENSMUSG00000045411.17	ENSMUST00000107950.9	3336	5	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_3	44.6933999601731	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896212	43901736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000107956.8	chr4	-	3107	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	6.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	409	False	NA	2	True	AATAAA	-21	NA	43045797	43032413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
ENSMUST00000107958.8	chr4	-	3280	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107958.8	3280	9	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_8	13.7636296085008	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	11	True	NA	2	True	AATAAA	-21	NA	43040288	43032413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43039965
ENSMUST00000107959.8	chr4	-	3060	10	FSM	ENSMUSG00000036002.13	ENSMUST00000107959.8	3060	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	19.5226996716421	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTCTACTTTTTTTTG	8	True	NA	2	True	AATAAA	-21	NA	43040291	43032413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43039814_43039900_43040273
ENSMUST00000107971.9	chr3	+	3567	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	57.8710741604975	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGGGCCTCAGATGT	NA	False	NA	10	True	AATAAA	-11	NA	55019549	55044732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUST00000107972.8	chr7	+	3495	5	FSM	ENSMUSG00000056592.15	ENSMUST00000107972.8	3495	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTGTACATTATTTCT	NA	False	NA	NA	False	TTTAAA	-4	NA	43211679	43224885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43211846_43214037_43214268_43216691_43216819_43217068_43217168_43222012
ENSMUST00000107973.3	chr4	+	2300	3	FSM	ENSMUSG00000036052.15	ENSMUST00000107973.3	2300	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATAGCCTCTGCGCA	267	False	NA	NA	False	AATAAA	-8	NA	42953093	42958723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_42953386_42956525_42957128_42957317
ENSMUST00000107986.9	chr7	-	4184	5	FSM	ENSMUSG00000012640.17	ENSMUST00000107986.9	4184	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	14.2894191624432	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTGTTCATATTGCTTT	NA	False	NA	0	True	AATAAA	-16	NA	42962679	42945946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42949601_42950593_42950690_42951034_42951162_42960454_42960610_42962527
ENSMUST00000107992.2	chr7	-	3148	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	55.1784982277215	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCGTGTCCTGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	42342142	42309528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
ENSMUST00000107994.3	chr7	-	4868	3	FSM	ENSMUSG00000074158.10	ENSMUST00000107994.3	4868	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATAATCTCTTCT	NA	False	NA	-23	True	NA	NA	NA	42292012	42258949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42263648_42265396_42265458_42291903
ENSMUST00000108022.8	chr11	+	3038	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGGTGTCTGATTCAT	NA	False	NA	NA	False	NA	NA	NA	86574810	86583283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_86574950_86580384
ENSMUST00000108022.8-0	chr11	+	679	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	92	2267	92	-2267	multi-exon	FALSE	canonical	3	249	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTCCCATGTTCCTCT	NA	False	NA	19	True	AATAAA	-26	NA	86574902	86581016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_86574950_86580384
ENSMUST00000108023.10	chr7	-	2000	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	0	0	0	0	multi-exon	FALSE	canonical	2	563	junction_4	98.4049652714874	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	False	NA	-12	True	AATAAA	-19	NA	37806959	37797408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ENSMUST00000108035.8	chr4	-	731	3	FSM	ENSMUSG00000073888.14	ENSMUST00000108035.8	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	9.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	2623	False	NA	5	True	AATAAA	-28	NA	41771547	41769466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41769655_41769843_41769977_41771137
ENSMUST00000108037.9	chr4	-	590	6	FSM	ENSMUSG00000073888.14	ENSMUST00000108037.9	590	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	16.7020956768904	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTCTCTTTTATTTCA	28	False	NA	5	True	AATAAA	-28	NA	41774142	41769466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41769655_41769843_41769977_41771137_41771236_41773464_41773525_41773735_41773804_41774099
ENSMUST00000108046.8	chr3	-	1409	4	FSM	ENSMUSG00000037161.15	ENSMUST00000108046.8	1409	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	91.1604202613295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTAGTCTTTCTTGTT	NA	False	NA	0	True	AATAAA	-17	NA	51303947	51295832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303648
ENSMUST00000108051.8	chr3	-	2514	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	34.1987654098149	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTACCTAGCACAGTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	51184935	51163085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ENSMUST00000108053.9	chr3	-	2611	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	57.3626378596925	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTACCTAGCACAGTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	51184996	51163085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ENSMUST00000108055.9	chr4	-	5593	13	FSM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	8.49632273398321	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTCCAGGCTTTCT	14	True	NA	NA	False	NA	NA	NA	41464840	41390744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
ENSMUST00000108065.9	chr3	+	3452	6	FSM	ENSMUSG00000025766.15	ENSMUST00000108065.9	3452	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	11.0199818511647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCATATTTTGTGC	NA	False	NA	3	True	ATTAAA	-13	NA	41697048	41713365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_41697125_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ENSMUST00000108068.8	chr4	-	4380	29	FSM	ENSMUSG00000028433.15	ENSMUST00000108068.8	4380	29	0	0	0	0	multi-exon	TRUE	canonical	3	748	junction_17	84.4073804080362	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCGTGTTCTGGC	209	False	NA	-3	True	AATAAA	-15	NA	41275144	41194312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ENSMUST00000108069.8	chr7	-	2407	7	FSM	ENSMUSG00000030499.10	ENSMUST00000108069.8	2407	7	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	8.78761755097605	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGCTCCGTCCTGTGC	6799	False	NA	-11	True	TATAAA	-8	NA	34353823	34338438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34353671
ENSMUST00000108070.9	chr7	-	2409	6	FSM	ENSMUSG00000030499.10	ENSMUST00000108070.9	2409	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	6.01996677731696	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGAGGCTCCGTCCTGTG	8360	False	NA	-12	True	TATAAA	-7	NA	34352262	34338439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008
ENSMUST00000108074.8	chr7	-	6224	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_13	29.0706138861218	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTATCTTTTTTAAATT	9808	False	NA	NA	False	ATTAAA	-18	NA	34012976	33936131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ENSMUST00000108074.8-0	chr7	-	5245	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	0	979	0	-106	multi-exon	FALSE	canonical	3	49	junction_13	29.0706138861218	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGGTTTATTCTTTCTA	9808	False	NA	NA	False	ATTAAA	-27	NA	34012976	33937110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ENSMUST00000108075.9	chr11	-	7053	34	FSM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_26	11.8228429036788	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTCTCTTTGTGATCCT	7485	False	NA	-14	True	AGTAAA	-22	NA	85030864	84875267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ENSMUST00000108078.9	chr3	+	2492	13	FSM	ENSMUSG00000037818.17	ENSMUST00000108078.9	2492	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTGGGTTCTGTCAGA	622	False	NA	NA	False	AATAAA	-14	NA	40801404	40890742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40801572_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871392_40873812_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
ENSMUST00000108081.9	chr11	-	3034	14	FSM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_13	134.623999724325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761615	84723186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ENSMUST00000108089.8	chr4	-	1336	7	FSM	ENSMUSG00000028416.14	ENSMUST00000108089.8	1336	7	0	0	0	0	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTCTGTGGTGGTGC	28	False	40948309	-6	True	AAAAAG	-40	NA	40948281	40936397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUST00000108102.9	chr7	-	1830	14	FSM	ENSMUSG00000001249.15	ENSMUST00000108102.9	1830	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	2.8658363092611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGCGTCTACAAACGGA	9112	False	NA	NA	False	AATAAA	-20	NA	30814715	30798149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802185_30802352_30802578_30802620_30802725_30802849_30802924_30803055_30808389_30808432_30808515_30808618_30810138_30810199_30814102_30814170_30814560
ENSMUST00000108109.8	chr3	+	2451	3	FSM	ENSMUSG00000037211.13	ENSMUST00000108109.8	2451	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	4	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694095	37698747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37694214_37694668_37694958_37696703
ENSMUST00000108112.10	chr3	+	3295	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	47.7393850912314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474044	37633245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ENSMUST00000108116.10	chr7	-	2071	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	34.291945118351	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAAGCCTCTTGTTTTG	NA	False	NA	-5	True	AATAAA	-15	NA	30672852	30657201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
ENSMUST00000108116.10-0	chr7	-	1857	9	FSM	ENSMUSG00000001247.17	ENSMUST00000108116.10	2071	9	214	0	109	0	multi-exon	TRUE	canonical	3	93	junction_6	34.291945118351	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAAGCCTCTTGTTTTG	NA	False	NA	-5	True	AATAAA	-15	NA	30672638	30657201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30665393_30665514_30671292_30671638_30672504
ENSMUST00000108126.8	chr4	-	2644	10	FSM	ENSMUSG00000028300.15	ENSMUST00000108126.8	2644	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.3315017762062	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	-11	True	NA	-5	True	AATAAA	-16	NA	35225834	35191286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35225787
ENSMUST00000108127.4	chr4	-	3193	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	10.8355895086516	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATGTTTTAGTTCATT	NA	False	NA	-5	True	AATAAA	-16	NA	35225880	35191286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ENSMUST00000108136.8	chr4	-	1688	11	FSM	ENSMUSG00000028294.16	ENSMUST00000108136.8	1688	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.88679622641132	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTACTGTGTATTTTTT	16	True	NA	NA	False	ATTAAA	-15	NA	34730178	34711331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34711596_34714394_34714536_34716304_34716504_34719044_34719165_34719572_34719782_34721415_34721575_34722607_34722797_34724814_34724906_34727904_34727989_34728795_34728909_34730059
ENSMUST00000108140.10	chr11	+	3156	4	FSM	ENSMUSG00000020684.15	ENSMUST00000108140.10	3156	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.94392028877595	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGTGTCAGCTCTGTTG	1436	False	NA	27	True	ATTAAA	-31	NA	83300513	83311865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83300708_83303303_83303661_83308677_83308803_83309385
ENSMUST00000108141.2	chr7	-	1526	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	0	0	0	0	multi-exon	TRUE	canonical	3	345	junction_5	209.790818435889	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACTGGACTTAGAAACT	3784	False	NA	-12	True	AATAAA	-18	NA	30349569	30340423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUST00000108142.8	chr4	-	2266	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	92.190426792828	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGCTTCATTCTTGCT	-5	True	NA	-17	True	CATAAA	-21	NA	34614913	34570795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUST00000108146.8	chr11	-	2389	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	16.4991582276861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2426	False	NA	-7	True	AATAAA	-16	NA	83189768	83185900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
ENSMUST00000108151.3	chr7	-	1775	6	FSM	ENSMUSG00000006310.11	ENSMUST00000108151.3	1775	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	31.6771210813104	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30292367	30289105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30290481_30291391_30292336
ENSMUST00000108153.9	chr4	+	4157	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_12	34.6965256025569	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTTCCTGTCTCG	-36	True	NA	11	True	AATAAA	-18	NA	33310310	33502614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUST00000108153.9-0	chr4	+	2440	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	17	1700	0	0	multi-exon	FALSE	canonical	3	214	junction_12	34.6965256025569	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAAGTTCTTCTGGTTTTG	-19	True	NA	13	True	ATTAAA	-26	NA	33310327	33500914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUST00000108159.2	chr4	+	2876	5	FSM	ENSMUSG00000054679.9	ENSMUST00000108159.2	829	5	0	-2047	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTTGATGTGCTGTCC	-27	True	NA	NA	False	AATAAA	-13	NA	33209262	33233340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_33209371_33223567_33223673_33225764_33225869_33226027_33226170_33230923
ENSMUST00000108164.8	chr7	-	1120	9	FSM	ENSMUSG00000036845.13	ENSMUST00000108164.8	1312	9	192	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	74.6976196073208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGACAAATCTCAAGTGCA	4885	False	NA	-10	True	NA	NA	NA	30259071	30254869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257510_30258866
ENSMUST00000108165.8	chr7	-	2466	12	FSM	ENSMUSG00000036864.17	ENSMUST00000108165.8	2466	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	15.6395345622021	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCCAGTTTACTGTT	NA	False	NA	-6	True	AATAAA	-16	NA	30251697	30238558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30239004_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30250182_30250260_30251632
ENSMUST00000108173.10	chr11	-	3489	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	36.5942466637706	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2743	False	NA	NA	False	AATAAA	-11	NA	82762036	82694647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ENSMUST00000108176.9	chr7	+	2014	12	FSM	ENSMUSG00000036931.16	ENSMUST00000108176.9	2014	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.20965410250706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTGGTGTCATTAAA	NA	False	NA	16	True	ATTAAA	-16	NA	30121156	30128171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30121260_30122827_30122929_30123059_30123121_30123664_30123877_30124646_30124835_30124926_30125033_30125133_30125281_30125394_30125447_30125540_30125690_30126492_30126610_30126850_30127016_30127558
ENSMUST00000108182.10	chr3	-	1219	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	636	3125	0	80	multi-exon	FALSE	canonical	3	154	junction_3	19.8445346520284	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACAATTTATAAAAACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	35986985	35949378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUST00000108190.8	chr7	-	4742	33	FSM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_7	40.394139716517	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ENSMUST00000108195.10	chr3	-	659	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	0	0	0	0	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTCATTGCTGACTTA	NA	False	NA	71	True	TATAAA	-1	NA	34135470	34131427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUST00000108195.10-0	chr3	-	573	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	11	75	0	0	multi-exon	FALSE	canonical	3	3089	junction_3	262.703330774469	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGTGTCTTGGTATA	NA	False	NA	-4	True	AATAAA	-44	NA	34135459	34131502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUST00000108196.8	chr7	-	1192	10	FSM	ENSMUSG00000001794.14	ENSMUST00000108196.8	1192	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	490.288577155219	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGACTCTGAGTGCTGA	NA	False	NA	-28	True	AATAAA	-21	NA	29892531	29886414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892454
ENSMUST00000108200.2	chr7	+	3604	3	FSM	ENSMUSG00000049421.14	ENSMUST00000108200.2	3604	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	44	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGATCCTTTGTTGTT	NA	False	NA	5	True	NA	NA	NA	29794609	29807039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29794637_29798952_29799148_29803657
ENSMUST00000108205.9	chr7	-	3711	5	FSM	ENSMUSG00000059975.16	ENSMUST00000108205.9	3711	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	11.8848643240047	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGATATTGCTCGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	29651318	29632215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138
ENSMUST00000108210.9	chr3	+	2684	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTGGGGTAGAATATATG	NA	False	NA	-75	True	AAGAAA	-39	NA	33854399	33864093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ENSMUST00000108210.9-0	chr3	+	3712	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	-60	-968	0	968	multi-exon	FALSE	canonical	3	43	junction_10	47.3543002489332	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCACTTCAACATTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	33854339	33865061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ENSMUST00000108222.9	chr4	+	4478	24	FSM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_15	74.8650203134992	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-16	True	NA	NA	False	ATTAAA	-23	NA	24496450	24602950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ENSMUST00000108228.8	chr3	+	2767	21	FSM	ENSMUSG00000056900.14	ENSMUST00000108228.8	2767	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.34353457130829	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	32871719	32987435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32872022_32891984_32892111_32901961_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ENSMUST00000108229.2	chr4	+	2922	8	FSM	ENSMUSG00000028248.16	ENSMUST00000108229.2	2922	8	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_3	34.8401597971921	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATAAAGTTTCTCCTC	-1	True	NA	NA	False	NA	NA	NA	21848057	21871342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515
ENSMUST00000108231.8	chr7	+	2040	12	FSM	ENSMUSG00000030584.15	ENSMUST00000108231.8	2040	12	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_10	19.1570283587301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	1764	False	NA	NA	False	NA	NA	NA	29003375	29016689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015638_29015751_29015905
ENSMUST00000108234.8	chr3	-	2510	11	FSM	ENSMUSG00000027669.15	ENSMUST00000108234.8	2510	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	28.7130632291297	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTACTTTTCCATTTT	NA	False	NA	-2	True	TATAAA	-16	NA	32670666	32638146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32668248_32668496_32670587
ENSMUST00000108236.5	chr7	-	1211	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	469	False	NA	-16	True	AATAAA	-21	NA	28981335	28955765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
ENSMUST00000108236.5-0	chr7	-	956	6	FSM	ENSMUSG00000074227.13	ENSMUST00000108236.5	1211	6	255	0	255	0	multi-exon	FALSE	canonical	0	0	junction_2	398.697679953119	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	724	False	NA	-16	True	AATAAA	-21	NA	28981080	28955765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
ENSMUST00000108238.8	chr7	+	1126	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_1	273.775194535329	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6037	False	NA	12	True	AATAAA	-15	NA	28937753	28946954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUST00000108239.7	chr11	+	7266	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	23.2130360212169	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTATGGTTTTTTTGTT	5999	False	NA	28	True	ATTAAA	-23	NA	79980225	80026620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ENSMUST00000108240.3	chr4	+	1406	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_11	64.4238290701982	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAGTTTTCTGGATTTT	-5	True	NA	12	True	AATAAA	-14	NA	21727754	21747962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
ENSMUST00000108246.9	chr4	-	6440	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAACTATTGCTTGAAC	-30	True	NA	NA	False	NA	NA	NA	19708993	19608302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ENSMUST00000108246.9-0	chr4	-	3366	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	0	3074	0	-1704	multi-exon	FALSE	canonical	3	155	junction_17	21.4877225927324	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTGAATTTGCTTTG	-30	True	NA	-9	True	ATTAAA	-21	NA	19708993	19611376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ENSMUST00000108249.9	chr3	+	4708	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_14	67.823095759034	2277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTTCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	31049895	31107108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ENSMUST00000108258.8	chr3	+	2139	4	FSM	ENSMUSG00000037661.15	ENSMUST00000108258.8	2139	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	77.1895214535122	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910163	30951339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30910395_30931383_30931711_30944090_30944191_30949858
ENSMUST00000108259.8	chr3	+	1916	3	FSM	ENSMUSG00000037661.15	ENSMUST00000108259.8	1916	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	143	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTTGTTTTTT	NA	False	NA	32	True	AATAAA	-45	NA	30910098	30951339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30910207_30931383_30931711_30949858
ENSMUST00000108268.10	chr11	-	1520	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	3.82970843102535	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGATGGCTGGCTTATT	NA	False	NA	3	True	AATAAA	-29	NA	78875772	78853799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
ENSMUST00000108275.2	chr11	+	582	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCACCCCA	NA	False	NA	40	True	NA	NA	NA	78427268	78432315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUST00000108275.2-0	chr11	+	830	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	0	-248	0	0	multi-exon	FALSE	canonical	3	256	junction_1	91.1125677390337	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	False	NA	24	True	AATAAA	-33	NA	78427268	78432563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUST00000108277.3	chr11	-	2156	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	155	1457	94	-1457	multi-exon	FALSE	canonical	3	137	junction_6	14.2789666604026	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	NA	False	NA	NA	False	NA	NA	NA	78427003	78415132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ENSMUST00000108278.9	chr7	+	1806	8	FSM	ENSMUSG00000030598.16	ENSMUST00000108278.9	1806	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	33.4310133418242	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTTTTTTCAATT	NA	False	NA	NA	False	NA	NA	NA	28416256	28437563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763_28436972_28437089
ENSMUST00000108279.9	chr7	+	1563	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	37.5340586075574	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCAATTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	28416297	28437569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
ENSMUST00000108281.8	chr7	+	1948	5	FSM	ENSMUSG00000037463.15	ENSMUST00000108281.8	1948	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	9.31396800509858	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGTTCATATCTTTTT	9140	False	NA	NA	False	AATAAA	-16	NA	28392568	28398760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28393076_28394155_28394268_28394430_28394527_28396064_28396201_28397663
ENSMUST00000108283.8	chr7	-	2899	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	0	0	0	0	multi-exon	TRUE	canonical	3	622	junction_9	35.4843036069349	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	4596	False	NA	-3	True	ATTAAA	-21	NA	28297610	28258243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
ENSMUST00000108285.9	chr4	-	1044	9	FSM	ENSMUSG00000028218.20	ENSMUST00000108285.9	1639	9	281	314	0	0	multi-exon	FALSE	canonical	0	0	junction_4	143.668672646475	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATAGTCTTTCTTTCA	263	False	NA	-41	True	ATTAAA	-40	NA	12171734	12153722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12165765_12165772_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ENSMUST00000108288.9	chr7	+	3060	2	FSM	ENSMUSG00000030600.16	ENSMUST00000108288.9	3060	2	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTGTGAGTGTGTGTT	90	False	NA	28	True	ATTAAA	-32	NA	28158082	28167667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28159489_28166013
ENSMUST00000108292.9	chr7	+	657	7	FSM	ENSMUSG00000060791.16	ENSMUST00000108292.9	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	45.6070170039655	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACATGGTATCTGCAAAAT	1815	False	NA	NA	False	AATAAA	-26	NA	28136871	28145971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28137000_28140858_28140956_28141093_28141144_28142644_28142695_28144277_28144361_28145341_28145416_28145796
ENSMUST00000108295.8	chr11	+	1371	5	FSM	ENSMUSG00000002058.14	ENSMUST00000108295.8	1371	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	104.920207777148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTGTCTATAGGGAA	NA	False	NA	19	True	AATAAA	-26	NA	78234331	78239990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239290
ENSMUST00000108297.3	chr4	-	4201	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGAAATCTGGCTGTC	-38	True	NA	-7	True	AATAAA	-21	NA	11966452	11958183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11962234_11966301
ENSMUST00000108298.9	chr3	-	4024	24	FSM	ENSMUSG00000027699.20	ENSMUST00000108298.9	4024	24	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_21	160.816383688852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1810	False	NA	NA	False	AATAAA	-20	NA	27208027	27151370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207851
ENSMUST00000108299.2	chr4	-	2588	3	FSM	ENSMUSG00000049225.15	ENSMUST00000108299.2	2588	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	3	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	-13	True	NA	NA	False	AATAAA	-20	NA	11966427	11959806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11962234_11965613_11965649_11966301
ENSMUST00000108300.8	chr3	-	4086	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_24	111.161098998506	1604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATGTGTCCTGTCAT	1827	False	NA	NA	False	AATAAA	-20	NA	27208010	27151370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ENSMUST00000108301.8	chr4	-	2635	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108301.8	2635	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACTGCTATGTTTAATTC	593	False	NA	NA	False	AATAAA	-20	NA	11965821	11959806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11962234_11965613
ENSMUST00000108304.9	chr4	+	2006	5	FSM	ENSMUSG00000028214.14	ENSMUST00000108304.9	2006	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.17944947177034	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTGCTATCCTCCATG	10	False	NA	NA	False	AATAAA	-26	NA	11704456	11714752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11704567_11705904_11706242_11711138_11711216_11711969_11712175_11713475
ENSMUST00000108306.9	chr4	+	652	4	FSM	ENSMUSG00000078773.12	ENSMUST00000108306.9	652	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	82.7056359761668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACGTACGATACAGGTA	2	True	NA	NA	False	GATAAA	-13	NA	11558948	11578957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633
ENSMUST00000108313.8	chr4	-	3696	14	FSM	ENSMUSG00000040728.16	ENSMUST00000108313.8	3696	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.1902217466658	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCGCACTCTTCTTCTTG	7117	False	NA	2	True	AATAAA	-21	NA	11386783	11331932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11333474_11353294_11353464_11357471_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
ENSMUST00000108319.9	chr4	-	3220	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_22	31.9212464720813	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTACAATTTAGTGGT	-1	True	NA	-14	True	ATTAAA	-20	NA	11254258	11204382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ENSMUST00000108321.2	chr3	-	3385	17	FSM	ENSMUSG00000027615.15	ENSMUST00000108321.2	3385	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	13.1101106021269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTCTAATAATTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	20089466	20050330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084574_20089212
ENSMUST00000108322.9	chr11	+	1685	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	10.0443461155462	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTTCTTTAAAG	6374	False	NA	21	True	ATTAAA	-15	NA	78079604	78083014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUST00000108324.4	chr4	+	2908	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	27.8285779741998	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAAAAAATGGCATCAC	309	False	NA	NA	False	NA	NA	NA	11191729	11204682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUST00000108334.8	chr4	-	2685	14	FSM	ENSMUSG00000028207.19	ENSMUST00000108334.8	2685	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	151.499253029971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	8850	False	NA	-4	True	AATAAA	-17	NA	9643717	9575266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9643534
ENSMUST00000108335.8	chr4	-	2514	12	FSM	ENSMUSG00000028207.19	ENSMUST00000108335.8	2514	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	162.153126283881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	8850	False	NA	-4	True	AATAAA	-17	NA	9643717	9575266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9643534
ENSMUST00000108336.8	chr7	+	3840	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	43	2013	0	1228	multi-exon	FALSE	canonical	3	74	junction_1	38.9422649572415	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCTGGCTCCATTTTC	NA	False	NA	37	True	NA	NA	NA	27430856	27451114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ENSMUST00000108337.8	chr4	-	2836	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	142.503411265212	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	NA	False	NA	-4	True	AATAAA	-17	NA	9669162	9575266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUST00000108340.9	chr4	-	6646	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATGTTTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	9669162	9449078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUST00000108340.9-0	chr4	-	4365	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	76	2205	0	-2205	multi-exon	FALSE	canonical	0	0	junction_20	115.972932507461	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	4	True	NA	1	True	AATAAA	-22	NA	9669086	9451283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUST00000108341.2	chr7	-	3403	11	FSM	ENSMUSG00000040390.14	ENSMUST00000108341.2	3403	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.592681838303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCCACCACCACCCG	NA	False	NA	NA	False	AATACA	-34	NA	27374023	27356088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27356412_27357121_27357128_27357276_27357958_27358254_27358368_27358445_27358600_27360959_27361077_27362649_27362897_27363822_27363999_27364374_27364524_27367773_27367955_27372767
ENSMUST00000108344.9	chr7	+	4544	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTTGTACTTTGGTG	NA	False	NA	6	True	AATAAA	-17	NA	27290976	27340251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUST00000108344.9-0	chr7	+	2977	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	194	1373	0	0	multi-exon	FALSE	canonical	3	377	junction_6	55.340153093199	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291170	27338878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUST00000108345.9	chr3	+	5102	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	82.6211232070831	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237375	16271201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ENSMUST00000108346.5	chr3	+	4929	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	138.147167904377	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAGTTCATTTACATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	16237399	16271019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ENSMUST00000108363.8	chr7	-	4724	19	FSM	ENSMUSG00000011751.17	ENSMUST00000108363.8	4724	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_18	8.28150549920323	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27095978	27055807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061820_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27095913
ENSMUST00000108365.4	chr3	-	559	4	FSM	ENSMUSG00000078784.9	ENSMUST00000108365.4	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	2488.45909483493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	-5	True	AATAAA	-18	NA	14676281	14671348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676076
ENSMUST00000108369.9	chr7	-	5377	33	FSM	ENSMUSG00000040488.19	ENSMUST00000108369.9	5377	33	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_30	156.229286126993	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	False	NA	-8	True	ATTAAA	-14	NA	27037117	27004566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779_27032832_27032836_27033049_27035095_27035137_27036852
ENSMUST00000108370.9	chr3	+	3359	19	FSM	ENSMUSG00000027550.15	ENSMUST00000108370.9	3359	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	19.4050394371038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGTTTTCTCTCTGAAA	NA	False	NA	NA	False	AATAAA	-27	NA	14598847	14637718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14637463
ENSMUST00000108375.9	chr11	+	7513	42	FSM	ENSMUSG00000000631.21	ENSMUST00000108375.9	7513	42	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	31.5068522239413	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77654071	77756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ENSMUST00000108377.8	chr3	-	936	8	FSM	ENSMUSG00000039795.15	ENSMUST00000108377.8	936	8	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	268.235352035545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGCTGTCTTAGAATT	NA	False	NA	NA	False	TTTAAA	-7	NA	10416373	10405678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_10405966_10406053_10406206_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ENSMUST00000108378.10	chr7	+	2276	14	FSM	ENSMUSG00000003762.14	ENSMUST00000108378.10	2276	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	13.8260537867321	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCAGTTCTTTTCTCTCT	NA	False	NA	16	True	AATAAA	-16	NA	26932637	26957369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUST00000108382.2	chr7	-	1756	6	FSM	ENSMUSG00000058709.12	ENSMUST00000108382.2	1756	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	218.816452763498	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGTTTTGACCTGGG	NA	False	NA	NA	False	NA	NA	NA	26865838	26858412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26865740
ENSMUST00000108386.8	chr4	+	524	5	FSM	ENSMUSG00000042198.13	ENSMUST00000108386.8	524	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	133.401649165218	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGTTTTGGGGTTTTT	NA	False	NA	25	True	ATTAAA	-18	NA	3938887	3943523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000108401.3	chr7	-	1240	8	FSM	ENSMUSG00000040725.14	ENSMUST00000108401.3	1240	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	386.110907192559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCACATCCGATTTCTT	9598	False	NA	NA	False	AATAAA	-22	NA	25454126	25436014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25436187_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ENSMUST00000108407.10	chr11	-	4811	22	FSM	ENSMUSG00000017631.20	ENSMUST00000108407.10	4811	22	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_9	20.258980819747	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76399821	76307560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713
ENSMUST00000108410.8	chr7	-	689	5	FSM	ENSMUSG00000005447.13	ENSMUST00000108410.8	689	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	172.544740574727	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	9173	False	NA	-2	True	ATTAAA	-15	NA	24996737	24994473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996706
ENSMUST00000108411.2	chr7	-	2248	11	FSM	ENSMUSG00000057177.13	ENSMUST00000108411.2	2248	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	117.064255859763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937276	24927682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24928344_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
ENSMUST00000108425.8	chr11	+	4290	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	118.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATGTTGAATGTCGG	2123	False	NA	NA	False	AATAAA	-17	NA	75570109	75597734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75570491_75583022_75583389_75594191
ENSMUST00000108425.8-0	chr11	+	3420	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	27	843	0	0	multi-exon	FALSE	canonical	3	229	junction_2	118.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTTTGGCTTGGTGA	2150	False	NA	10	True	NA	NA	NA	75570136	75596891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75570491_75583022_75583389_75594191
ENSMUST00000108429.8	chr7	+	633	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	10447.7852504729	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584138	24589231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUST00000108430.10	chr7	+	512	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	262	0	0	0	multi-exon	FALSE	canonical	3	8873	junction_5	7497.54368843557	2473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUST00000108431.3	chr11	+	4718	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	44.4739631998939	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	False	NA	13	True	AATAAA	-17	NA	75546698	75564734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUST00000108433.8	chr11	+	3236	14	FSM	ENSMUSG00000038178.17	ENSMUST00000108433.8	3236	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.5805522935017	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGACATAGTGGCACACA	6875	False	NA	121	True	AAAAAG	-3	NA	75422523	75464709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75422605_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ENSMUST00000108448.8	chr11	-	3239	9	FSM	ENSMUSG00000001323.18	ENSMUST00000108448.8	3239	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	30.0956807532244	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTATTTGGGGGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	74816599	74797618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803959_74810262_74810489_74816444
ENSMUST00000108450.5	chr7	-	1955	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_1	167.41517255016	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGTGTTTTGTAATC	NA	False	NA	-4	True	AATAAA	-16	NA	19483458	19458085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ENSMUST00000108453.2	chr7	+	1530	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	5.5	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGACTTTCTTGGGGT	727	False	NA	26	True	AATAAA	-21	NA	19311211	19314581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19311554_19311741_19311886_19313537
ENSMUST00000108457.3	chr7	-	1632	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108457.3	1632	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.7470926301023	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTAGATCGCTCCCTGC	2470	False	NA	NA	False	NA	NA	NA	19137708	19128488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19128638_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137679
ENSMUST00000108458.10	chr7	-	1823	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108458.10	1823	13	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_12	5.99247212944893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGCGATCTGCTCAATT	2149	False	NA	NA	False	NA	NA	NA	19138029	19128361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
ENSMUST00000108476.8	chr11	-	2723	12	FSM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	20.3534877308514	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4465	False	NA	-1	True	ATTAAA	-23	NA	73089868	73074422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
ENSMUST00000108479.2	chr7	+	2388	4	FSM	ENSMUSG00000030410.17	ENSMUST00000108479.2	2388	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	77.0757203447796	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTTCTGTTCCCTGGG	NA	False	NA	14	True	ACTAAA	-14	NA	18810182	18816701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18816200
ENSMUST00000108485.9	chr11	+	4520	21	FSM	ENSMUSG00000020788.16	ENSMUST00000108485.9	4520	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_20	24.9797918325994	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTAGTCTTTTCTGAG	NA	False	NA	22	True	AATAAA	-22	NA	72851994	72883869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72882514
ENSMUST00000108492.9	chr7	-	6402	15	FSM	ENSMUSG00000004328.16	ENSMUST00000108492.9	6402	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	3.50218590632322	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCGGTGTTGACTCATC	NA	False	NA	-1	True	CATAAA	-25	NA	16796352	16765431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16769891_16771058_16771141_16773482_16773595_16774893_16775166_16776513_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16788606_16788753_16790184_16790376_16796280
ENSMUST00000108493.3	chr7	+	2989	4	FSM	ENSMUSG00000078794.5	ENSMUST00000108493.3	2989	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	6.53197264742181	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTATATCTGGACA	NA	False	NA	NA	False	NA	NA	NA	16609241	16621387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16609599_16617051_16617149_16617282_16617436_16619005
ENSMUST00000108495.9	chr7	+	3082	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_8	55.9168933502007	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATAGGTTTTCCAGGCCA	NA	False	NA	12	True	AATAAA	-12	NA	16550241	16574852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ENSMUST00000108496.9	chr7	+	2764	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_5	112.684293492927	2750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515264	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ENSMUST00000108500.8	chr11	-	3572	8	FSM	ENSMUSG00000045667.15	ENSMUST00000108500.8	3572	8	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_3	27.0237990350305	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTGGTGGTACTCAT	NA	False	NA	-6	True	ATTAAA	-15	NA	72302537	72279989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72282240_72290699_72290852_72291154_72291273_72292173_72292354_72293250_72293327_72293836_72294077_72294742_72294831_72302069
ENSMUST00000108503.9	chr11	-	1397	8	FSM	ENSMUSG00000020799.17	ENSMUST00000108503.9	1397	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	18.5681315754731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGCACAGAGCTCTCA	NA	False	NA	-1	True	ATTAAA	-17	NA	72252699	72235547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72248310_72248477_72250504_72250712_72252618
ENSMUST00000108506.10	chr11	-	4332	19	FSM	ENSMUSG00000107877.3	ENSMUST00000108506.10	4332	19	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_18	6.45712354260351	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72094197	72044922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72094019
ENSMUST00000108511.8	chr11	+	2866	9	FSM	ENSMUSG00000020811.17	ENSMUST00000108511.8	2866	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	2.29128784747792	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTCTGCCTCTCT	NA	False	NA	19	True	CATAAA	-32	NA	71641805	71680473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_71642056_71650403_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494
ENSMUST00000108513.5	chr7	-	1344	3	FSM	ENSMUSG00000041583.9	ENSMUST00000108513.5	1344	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	9.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCAGTTTTTACCCCC	NA	False	NA	20	True	AATAAA	-36	NA	15573603	15567165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_15567876_15568304_15568891_15573555
ENSMUST00000108527.8	chr11	-	5184	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	13.0123907891512	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGTATCCAGCATTTA	NA	False	NA	2	True	ATTAAA	-30	NA	70895263	70874916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ENSMUST00000108530.2	chr11	-	2389	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	121.230008016786	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGAATAAATTTTTATTC	NA	False	NA	-29	True	AATAAA	-19	NA	70860780	70833927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000108531.8	chr11	-	2453	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_6	132.716744893024	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCTTTACAATTAAAGT	NA	False	NA	1	True	AATAAA	-31	NA	70860799	70833897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUST00000108532.11	chr7	-	3346	4	FSM	ENSMUSG00000070814.18	ENSMUST00000108532.11	3346	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	5.18544972870135	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCAGGCTGAGTTCGTG	1644	False	NA	-6	True	AATAAA	-14	NA	13012647	12992894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12995567_13003260_13003574_13011071_13011355_13012569
ENSMUST00000108535.8	chr7	+	2594	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108535.8	2594	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	5.2618912949623	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGTTTCCTGACTACAC	NA	False	NA	NA	False	NA	NA	NA	12711774	12717323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772
ENSMUST00000108535.8-0	chr7	+	3538	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108535.8	2594	5	0	-944	0	0	multi-exon	FALSE	canonical	3	25	junction_1	5.2618912949623	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTCTGCAGATGGG	NA	False	NA	NA	False	NA	NA	NA	12711774	12718267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772
ENSMUST00000108539.8	chr7	+	794	6	FSM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_1	6466.78878578851	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTGTGTGCTTGTCT	NA	False	NA	37	True	AATAAA	-23	NA	12656216	12660612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUST00000108545.9	chr11	-	4377	21	FSM	ENSMUSG00000040712.17	ENSMUST00000108545.9	4377	21	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	7.40877857679658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCGGCCTCTCTCTGC	8389	False	NA	0	True	ATTAAA	-17	NA	70578769	70560288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ENSMUST00000108559.3	chr7	+	1539	4	FSM	ENSMUSG00000055150.16	ENSMUST00000108559.3	1539	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCCCCCATGGCAA	NA	False	NA	NA	False	NA	NA	NA	6374362	6382490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6374396_6376125_6376253_6378517_6378614_6381207
ENSMUST00000108562.2	chr7	+	3498	5	FSM	ENSMUSG00000054893.16	ENSMUST00000108562.2	3498	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	14.0245320777557	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTCTTTTACATGTTCT	4261	False	NA	NA	False	AATAAA	-37	NA	6290866	6310681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6290970_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ENSMUST00000108566.8	chr7	+	1648	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	66.2740522376593	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGACTCTCCGGTGTTG	2967	False	NA	15	True	AATAAA	-24	NA	6175511	6193420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
ENSMUST00000108568.10	chr11	+	1777	15	FSM	ENSMUSG00000060216.16	ENSMUST00000108568.10	1777	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	60.0347263452324	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323462	70331500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330643_70330732_70330989
ENSMUST00000108575.9	chr11	-	643	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108575.9	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	223.35671519393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128679	70126031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70126295_70126822_70127038_70128356_70128452_70128609
ENSMUST00000108577.8	chr11	-	659	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108577.8	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	221.278607692254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	False	NA	-14	True	ATTAAA	-13	NA	70128728	70126033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70126291_70126849_70127038_70128356_70128452_70128609
ENSMUST00000108578.9	chr11	-	880	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	133.830340356737	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128740	70126031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUST00000108579.8	chr11	-	667	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	177.768263634304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGCTGCCAGCTGCCG	NA	False	NA	-12	True	ATTAAA	-15	NA	70128730	70126031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70126295_70126849_70127038_70128356_70128452_70128609
ENSMUST00000108582.10	chr7	+	2774	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108582.10	2774	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	203.174647778703	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	635	False	NA	16	True	ATTAAA	-17	NA	4743165	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUST00000108583.9	chr7	+	2177	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	88.3026578025826	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	653	False	NA	16	True	ATTAAA	-17	NA	4743183	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUST00000108593.8	chr11	+	1627	8	FSM	ENSMUSG00000018559.17	ENSMUST00000108593.8	1627	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	14.8020958251299	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCTAGACCCTTCTCT	NA	False	NA	NA	False	TTTAAA	-27	NA	69871981	69881427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
ENSMUST00000108594.8	chr11	-	1454	9	FSM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	188.652085530481	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	8900	False	NA	0	True	AATAAA	-30	NA	69872078	69859049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039_69871389_69872032
ENSMUST00000108609.8	chr11	-	1181	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108609.8	849	6	-21	-311	0	0	multi-exon	FALSE	canonical	3	1864	junction_5	7741.45703081791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6572	False	NA	-15	True	AATAAA	-20	NA	69811911	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811849
ENSMUST00000108610.8	chr11	-	1409	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108610.8	1409	6	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_5	8144.23656336185	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	7027	False	NA	-15	True	AATAAA	-20	NA	69811456	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166
ENSMUST00000108611.8	chr11	-	1353	7	FSM	ENSMUSG00000078812.11	ENSMUST00000108611.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	9790.70116658319	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6717	False	NA	-15	True	AATAAA	-20	NA	69811766	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811626
ENSMUST00000108612.8	chr11	-	1259	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108612.8	1259	6	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_5	7943.03597876782	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6717	False	NA	-15	True	AATAAA	-20	NA	69811766	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811626
ENSMUST00000108613.10	chr11	-	1343	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	0	0	0	0	multi-exon	FALSE	canonical	3	20384	junction_3	507.007534460781	10657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	9941	False	NA	-15	True	AATAAA	-20	NA	69812212	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ENSMUST00000108622.8	chr11	-	2086	17	FSM	ENSMUSG00000001588.13	ENSMUST00000108622.8	2086	17	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_13	5.80813007774447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCTTAGTTCATTTA	NA	False	NA	-6	True	ATTAAA	-15	NA	69781157	69772392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69772552_69772807_69772858_69773207_69773319_69773410_69773521_69774409_69774583_69775147_69775318_69775411_69775507_69775621_69775692_69776218_69776431_69776518_69776643_69777793_69777895_69777981_69778034_69780062_69780173_69780261_69780337_69780443_69780540_69780645_69780691_69780824
ENSMUST00000108625.8	chr7	+	914	4	FSM	ENSMUSG00000006333.15	ENSMUST00000108625.8	914	4	0	0	0	0	multi-exon	FALSE	canonical	3	14286	junction_1	337.374503416538	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTTTTCCAGCTGAAAAAT	1323	False	NA	-37	True	NA	NA	NA	3707050	3709856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUST00000108627.4	chr7	+	1319	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	0	0	0	0	multi-exon	FALSE	canonical	3	1035	junction_3	83.107694522763	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2933	False	NA	-2	True	AATAAA	-8	NA	3697521	3704003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUST00000108628.8	chr11	-	2450	12	FSM	ENSMUSG00000001583.14	ENSMUST00000108628.8	2450	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	7.83191183397813	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACTTGGGAGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	69747951	69742044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69742542_69742623_69742720_69742800_69743112_69743638_69743719_69743942_69744123_69744406_69744502_69745783_69746058_69746345_69746630_69746736_69746893_69747203_69747396_69747518_69747590_69747737
ENSMUST00000108629.8	chr7	+	1238	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108629.8	1238	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	534.869610278991	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	2219	False	NA	-2	True	AATAAA	-8	NA	3696807	3704003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703613
ENSMUST00000108633.9	chr11	+	1770	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	0	1015	0	0	multi-exon	FALSE	canonical	3	60	junction_1	4.6246897303539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCGGATGTGATGGGA	NA	False	NA	22	True	TATAAA	-22	NA	69737442	69741869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUST00000108636.2	chr7	+	1798	13	FSM	ENSMUSG00000008373.17	ENSMUST00000108636.2	1798	13	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_8	240.724759262985	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGGTGTGAGTGATTAT	3505	False	NA	14	True	ATTAAA	-22	NA	3633555	3644228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641647_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUST00000108641.10	chr7	-	1166	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	47.3142684610044	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632928	3623322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUST00000108647.3	chr7	+	2442	3	FSM	ENSMUSG00000078815.9	ENSMUST00000108647.3	868	3	-1070	-504	-603	0	multi-exon	FALSE	canonical	2	4	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472107	3484183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3473509_3478953_3479029_3483217
ENSMUST00000108657.4	chr11	+	1822	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108657.4	1822	11	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUST00000108658.10	chr11	+	1771	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108658.10	1771	11	0	0	0	0	multi-exon	FALSE	canonical	3	1895	junction_3	134.752402575984	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471184	69482698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ENSMUST00000108661.8	chr11	-	7261	40	FSM	ENSMUSG00000018474.19	ENSMUST00000108661.8	7261	40	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_39	13.548558783203	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69260232	69234098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69259961
ENSMUST00000108666.8	chr11	+	1831	9	FSM	ENSMUSG00000020897.13	ENSMUST00000108666.8	1831	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	202.492592457107	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936472	68942490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68936637_68936760_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUST00000108671.2	chr11	-	3359	17	FSM	ENSMUSG00000052921.14	ENSMUST00000108671.2	4372	17	0	1013	0	357	multi-exon	FALSE	canonical	2	6	junction_4	3.00974978195863	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGGCTACTTTCTT	5985	False	NA	NA	False	ATTAAA	-16	NA	68848306	68834995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_68835656_68837191_68837297_68837386_68837470_68837809_68837963_68838061_68838223_68838401_68838495_68838591_68838667_68840796_68840927_68841825_68841979_68842157_68842319_68842444_68842657_68842736_68842796_68844312_68844368_68844637_68844989_68845243_68845900_68847671_68847804_68848186
ENSMUST00000108677.2	chr11	-	4447	15	FSM	ENSMUSG00000020905.12	ENSMUST00000108677.2	4447	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	6.60086574408453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTTCCTTTCCTTCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	67812979	67745348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770636_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ENSMUST00000108681.9	chr11	+	1941	14	FSM	ENSMUSG00000033066.18	ENSMUST00000108681.9	1941	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	3.36357093985776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTCCGGGGGGTTCCTG	1123	False	NA	NA	False	AAAACA	-43	NA	67345916	67574286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
ENSMUST00000108681.9-0	chr11	+	3218	14	FSM	ENSMUSG00000033066.18	ENSMUST00000108681.9	1941	14	237	-1514	147	0	multi-exon	FALSE	canonical	1	4	junction_8	3.36357093985776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTGGTAATTTGCTTT	1360	False	NA	5	True	ATTAAA	-14	NA	67346153	67575800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_67346601_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
ENSMUST00000108697.8	chr11	+	2612	24	FSM	ENSMUSG00000020549.15	ENSMUST00000108697.8	2612	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	73.6751414320214	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTCAGCCTGCAGTA	NA	False	NA	NA	False	NA	NA	NA	64869896	64892154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883267_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUST00000108711.8	chr11	-	4287	10	FSM	ENSMUSG00000001036.18	ENSMUST00000108711.8	4287	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	151.278257231868	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470495	61408074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424414_61424508_61426096_61426210_61436975_61437738_61438695_61438810_61470392
ENSMUST00000108712.8	chr11	-	4458	11	FSM	ENSMUSG00000001036.18	ENSMUST00000108712.8	4458	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	155.495498327122	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470495	61408074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424414_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61438695_61438810_61470392
ENSMUST00000108713.8	chr11	-	4207	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	30.1330383466387	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470511	61408074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ENSMUST00000108714.2	chr11	-	3069	7	FSM	ENSMUSG00000001034.18	ENSMUST00000108714.2	3069	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	75.7840499196382	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385122	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384422_61384781_61384905
ENSMUST00000108719.4	chr11	+	4268	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_6	33.7192452465947	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCACACATGTGGACA	NA	False	NA	39	True	AATAAA	-24	NA	60590670	60605012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ENSMUST00000108721.9	chr11	-	1813	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGGTCTAAGCAGTT	NA	False	NA	0	True	NA	NA	NA	60307877	60291451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUST00000108721.9-0	chr11	-	1394	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	0	419	0	-407	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307877	60291870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUST00000108722.5	chr11	+	1858	14	FSM	ENSMUSG00000056598.17	ENSMUST00000108722.5	1858	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	9.60892090438596	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAAGGTCTGGTGTCA	3472	False	NA	NA	False	AATATA	-14	NA	60244205	60285159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266731_60268633_60268811_60275039_60275172_60278118_60278190_60279638_60279763_60284522_60284655_60284950
ENSMUST00000108723.9	chr11	+	1917	14	FSM	ENSMUSG00000056598.17	ENSMUST00000108723.9	1917	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	9.60892090438596	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGTGTCAGTATTCTC	3421	False	NA	NA	False	AATATA	-22	NA	60244154	60285167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60244259_60244927_60245027_60249443_60249643_60254289_60254407_60255691_60255859_60261294_60261442_60265903_60266024_60266619_60266733_60268635_60268811_60275039_60275172_60278118_60278190_60279638_60279763_60284522_60284655_60284950
ENSMUST00000108751.8	chr11	+	4021	24	FSM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	102.676193716673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCCCCTCTCATTCCT	3585	False	NA	17	True	ATTAAA	-14	NA	59553332	59667049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ENSMUST00000108752.10	chr8	+	3497	13	FSM	ENSMUSG00000025812.19	ENSMUST00000108752.10	3497	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	27.9717119008949	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	128032790	128128540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ENSMUST00000108754.8	chr2	+	3499	7	FSM	ENSMUSG00000027589.15	ENSMUST00000108754.8	3499	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	27.4028587316482	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATTCTCAGTATTGCT	NA	False	NA	11	True	AATAAA	-14	NA	181479705	181499239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493374_181493503_181496730
ENSMUST00000108769.8	chr2	-	1460	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108769.8	1460	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	23.2849200127464	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAGCTGTTGTTATGGT	NA	False	NA	-3	True	AGTAAA	-10	NA	181335723	181330299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ENSMUST00000108776.8	chr2	-	1216	6	FSM	ENSMUSG00000002458.14	ENSMUST00000108776.8	1216	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	50.8660987299006	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTGGCCCTGTCCAACT	NA	False	NA	NA	False	NA	NA	NA	181335603	181330858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335155
ENSMUST00000108777.10	chr11	+	4351	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTAACCCCAGCACTTGG	9481	False	NA	7	True	NA	NA	NA	59340870	59349299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
ENSMUST00000108777.10-0	chr11	+	1908	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	76	2367	0	0	multi-exon	FALSE	canonical	3	15	junction_3	13.8506317545446	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGTTCCTTTTTTATA	9557	False	NA	15	True	NA	NA	NA	59340946	59346932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
ENSMUST00000108778.8	chr2	-	1427	6	FSM	ENSMUSG00000002458.14	ENSMUST00000108778.8	1427	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	53.6261130420619	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGTTATGGTCTT	NA	False	NA	0	True	AGTAAA	-13	NA	181333610	181330296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181333513
ENSMUST00000108785.2	chr11	+	792	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108785.2	792	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	266.007936389541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACTTTTGGGGTTGACT	NA	False	NA	12	True	ATTAAA	-26	NA	59093330	59096828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59093486_59095000_59095082_59095381_59095584_59096474
ENSMUST00000108787.9	chr11	+	718	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	235.799820940465	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093314	59096714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
ENSMUST00000108789.9	chr2	-	5714	17	FSM	ENSMUSG00000000823.17	ENSMUST00000108789.9	5714	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	14.7042457729052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTGTGTGGCTGAGTTT	7438	False	NA	-1	True	AATAAA	-26	NA	181234596	181223895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234213
ENSMUST00000108797.8	chr2	+	3664	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	79.8884221899519	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAACAAAGCAAA	7071	False	NA	NA	False	NA	NA	NA	181162343	181194025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ENSMUST00000108799.10	chr2	+	985	9	FSM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	401.298965080898	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181139023	181157180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
ENSMUST00000108799.10-0	chr2	+	1566	9	FSM	ENSMUSG00000000827.19	ENSMUST00000108799.10	985	9	-32	-549	0	-320	multi-exon	FALSE	canonical	3	48	junction_5	401.298965080898	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGCCAGTACCAGTTA	NA	False	NA	62	True	NA	NA	NA	181138991	181157729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181152296_181152324_181153366_181153409_181154831_181154881_181156872
ENSMUST00000108800.8-1	chr2	+	2259	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	12	1204	0	502	multi-exon	FALSE	canonical	3	271	junction_3	391.498454658508	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATTTGTTTGGTCTGTC	NA	False	NA	11	True	AATAAA	-25	NA	181138991	181158551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
ENSMUST00000108807.9	chr2	+	2072	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	10.1074230147946	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTCTCAGTGGAGAC	NA	False	NA	5	True	ATTAAA	-12	NA	181007197	181022575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
ENSMUST00000108809.8	chr11	+	3522	5	FSM	ENSMUSG00000020455.17	ENSMUST00000108809.8	3522	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	36.1481327318577	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTCTCTGCTTATCCT	1666	False	NA	12	True	AATAAA	-12	NA	58868918	58882281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879661
ENSMUST00000108814.8	chr2	+	4322	34	FSM	ENSMUSG00000038685.19	ENSMUST00000108814.8	4322	34	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_31	42.9439380842258	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTAGGCTGTCCAAT	NA	False	NA	-23	True	NA	NA	NA	180961577	180998371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180996801_180996919_180997120_180997346_180997443_180997606_180997716
ENSMUST00000108815.8	chr2	+	4243	33	FSM	ENSMUSG00000038685.19	ENSMUST00000108815.8	4243	33	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_30	41.94582396899	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961577	180998409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997716
ENSMUST00000108830.2	chr8	+	3191	12	FSM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	79.5842502795747	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGTTACTAGTCT	NA	False	NA	23	True	TATAAA	-12	NA	124170046	124190001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124170185_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUST00000108832.8	chr8	+	3242	14	FSM	ENSMUSG00000001482.16	ENSMUST00000108832.8	3242	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	108.849605816422	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169743	124190009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124169791_124172836_124172924_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUST00000108840.4	chr8	+	2582	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_17	99.4416940675849	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100561	124130545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ENSMUST00000108841.2	chr2	+	689	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	0	0	0	0	multi-exon	TRUE	canonical	3	258	junction_1	248.035279748668	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3425	False	NA	1	True	AATAAA	-17	NA	180829128	180830297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ENSMUST00000108846.2	chr11	+	1745	3	FSM	ENSMUSG00000020520.15	ENSMUST00000108846.2	1745	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAACGGTGTCTGCCTGG	NA	False	NA	NA	False	AGTAAA	-24	NA	57536290	57617737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57536544_57612120_57612224_57616348
ENSMUST00000108849.8	chr11	+	4827	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	35	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGAATGATGTATATTA	NA	False	NA	19	True	AATAAA	-20	NA	57409489	57424641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57409539_57418684_57419116_57420294
ENSMUST00000108850.2	chr11	-	1765	14	FSM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	166.027587356179	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	57409429	57374617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899_57405115_57409398
ENSMUST00000108857.2	chr11	-	541	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	0	0	0	0	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTGGTGTATGTT	NA	False	NA	-7	True	AATAAA	-20	NA	55352065	55337466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
ENSMUST00000108857.2-0	chr11	-	448	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	93	0	51	0	multi-exon	FALSE	canonical	3	2715	junction_3	136.123310110927	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTCTGGTGTATGTT	NA	False	NA	-7	True	AATAAA	-20	NA	55351972	55337466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
ENSMUST00000108858.8	chr11	-	2115	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_8	195.999685058956	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTCCCGGGTGATGG	3858	False	NA	-2	True	AATAAA	-22	NA	55310724	55285325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
ENSMUST00000108859.8	chr2	+	2639	12	FSM	ENSMUSG00000027575.20	ENSMUST00000108859.8	2639	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	79.8262576158915	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTATCAGTGGTTGGT	4100	False	NA	20	True	NA	NA	NA	180609092	180624104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622196_180622268_180622829
ENSMUST00000108872.9	chr11	+	5264	11	FSM	ENSMUSG00000020261.16	ENSMUST00000108872.9	5264	11	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_5	8.1516869419771	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTGCAAACTGTGTCTT	NA	False	NA	24	True	AATAAA	-24	NA	55095175	55127156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192
ENSMUST00000108883.10	chr11	-	2489	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_6	73.4786608478952	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924271	54869933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUST00000108886.8	chr11	-	2642	17	FSM	ENSMUSG00000020400.18	ENSMUST00000108886.8	2642	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_16	76.2520491527933	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	6841	False	NA	-5	True	CATAAA	-18	NA	54853742	54801612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54853658
ENSMUST00000108889.10	chr11	-	2834	18	FSM	ENSMUSG00000020400.18	ENSMUST00000108889.10	2834	18	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	53.1161161918674	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGACTGGCTAATTCT	3582	False	NA	-3	True	CATAAA	-20	NA	54846948	54801610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
ENSMUST00000108891.2	chr2	-	2975	10	FSM	ENSMUSG00000038990.15	ENSMUST00000108891.2	2975	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	39.9001841018062	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915289	179900332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ENSMUST00000108895.8	chr11	+	1829	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	14.7082743152735	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTATGCTCATTATTGT	NA	False	NA	NA	False	AATAAA	-15	NA	54413715	54525835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
ENSMUST00000108901.8	chr2	+	1444	7	FSM	ENSMUSG00000039069.20	ENSMUST00000108901.8	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.2077702677623	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	False	NA	NA	False	AATATA	-1	NA	179713585	179727695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ENSMUST00000108904.10	chr11	+	2594	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108904.10	2594	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.5876924017073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTACTTAATTATTT	NA	False	NA	9	True	ATTAAA	-23	NA	54195027	54252365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ENSMUST00000108905.10	chr11	+	2590	21	FSM	ENSMUSG00000020333.18	ENSMUST00000108905.10	5807	21	0	3217	0	0	multi-exon	FALSE	canonical	3	10	junction_1	14.4874946074192	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATTGTACTTAATT	NA	False	NA	5	True	ATTAAA	-19	NA	54195027	54252361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54195160_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227761_54227840_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ENSMUST00000108916.8	chr2	+	2656	13	FSM	ENSMUSG00000027525.19	ENSMUST00000108916.8	2656	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.70579079087156	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTTTTTTTGTTGTTT	1698	False	NA	NA	False	AATAAA	-18	NA	177760971	177978284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177761096_177897905_177898068_177901970_177902049_177911109_177911293_177920689_177920900_177924802_177924978_177925652_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ENSMUST00000108920.10	chr11	+	2136	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	9.82940913537621	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGGCTTTTTATTTA	NA	False	NA	10	True	TATAAA	-17	NA	53660840	53668149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUST00000108923.2	chr2	-	1372	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	29	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAATTTTAAAAGAATTCA	NA	False	NA	-14	True	NA	NA	NA	177720269	177710282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177711409_177711615_177711743_177720150
ENSMUST00000108924.9	chr2	-	3746	4	FSM	ENSMUSG00000078861.9	ENSMUST00000108924.9	962	4	-51	-2733	0	2733	multi-exon	FALSE	canonical	3	15	junction_1	38.724095283887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGCTTCATGGTCATAA	NA	False	NA	-3	True	NA	NA	NA	177720269	177706754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177710194_177711347_177711409_177711615_177711743_177720150
ENSMUST00000108925.10	chr2	+	923	3	FSM	ENSMUSG00000074519.12	ENSMUST00000108925.10	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	10.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGATATGCAGTATAACAT	NA	False	NA	NA	False	NA	NA	NA	177665076	177674080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177665175_177673047_177673175_177673382
ENSMUST00000108926.3	chr2	+	1413	4	FSM	ENSMUSG00000074519.12	ENSMUST00000108926.3	1413	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	11.2644968324772	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTAAACCCTTTGCAGG	NA	False	NA	NA	False	NA	NA	NA	177665171	177675815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177665175_177673047_177673175_177673382_177673444_177674593
ENSMUST00000108926.3-0	chr2	+	6262	4	FSM	ENSMUSG00000074519.12	ENSMUST00000108926.3	1413	4	-95	-4754	0	4754	multi-exon	FALSE	canonical	2	14	junction_3	11.2644968324772	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	177665076	177680569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177665175_177673047_177673175_177673382_177673444_177674593
ENSMUST00000108930.9	chr2	-	4613	5	FSM	ENSMUSG00000078862.11	ENSMUST00000108930.9	1807	5	0	-2806	0	2806	multi-exon	FALSE	canonical	3	25	junction_3	8.13557004763649	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177599090	177584523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177588804_177589962_177590024_177590229_177590357_177595474_177595530_177599000
ENSMUST00000108935.8	chr2	+	438	3	FSM	ENSMUSG00000074521.10	ENSMUST00000108935.8	1451	3	0	1013	0	88	multi-exon	FALSE	canonical	3	28	junction_2	14.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGCTTTCAGTTATGGA	NA	False	NA	NA	False	NA	NA	NA	177538888	177546564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177539047_177546077_177546205_177546411
ENSMUST00000108939.9	chr2	-	4394	4	FSM	ENSMUSG00000095362.8	ENSMUST00000108939.9	1576	4	-18	-2800	0	2800	multi-exon	FALSE	canonical	3	248	junction_1	217.946476609893	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482129	177470783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177474890_177476043_177476105_177476312_177476440_177482029
ENSMUST00000108945.8	chr2	-	1348	4	FSM	ENSMUSG00000078865.9	ENSMUST00000108945.8	1348	4	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	226.200992236747	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAAAGACCGTACAGGA	2348	False	NA	NA	False	NA	NA	NA	177269992	177260996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177262087_177263226_177263288_177263479_177263607_177269922
ENSMUST00000108947.3	chr2	+	4149	4	FSM	ENSMUSG00000094786.2	ENSMUST00000108947.3	1209	4	-100	-2840	0	2548	multi-exon	FALSE	canonical	3	122	junction_1	52.0405824546788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190007	177204104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177190111_177198701_177198829_177199035_177199097_177200246
ENSMUST00000108949.3	chr2	-	2939	4	FSM	ENSMUSG00000089756.3	ENSMUST00000108949.3	2939	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.5728487143349	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTCTTACTGTATTGC	NA	False	NA	NA	False	NA	NA	NA	175722844	175710673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_175713362_175714514_175714576_175714781_175714909_175722781
ENSMUST00000108952.4	chr2	+	4675	4	FSM	ENSMUSG00000078866.11	ENSMUST00000108952.4	1569	4	-113	-2993	0	1067	multi-exon	FALSE	canonical	3	64	junction_2	23.3666428910958	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	25	True	NA	NA	NA	177156525	177170989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177156642_177165078_177165206_177165410_177165472_177166618
ENSMUST00000108955.2	chr2	-	1415	4	FSM	ENSMUSG00000078867.10	ENSMUST00000108955.2	1415	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	139.800651723167	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTCATATAGATAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	177090112	177079877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177081015_177081219_177081347_177086489_177086545_177090016
ENSMUST00000108959.3	chr2	-	1581	4	FSM	ENSMUSG00000078868.4	ENSMUST00000108959.3	1581	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	8.04155872120988	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTAAAGCCTTTGCAGG	NA	False	NA	NA	False	NA	NA	NA	177016100	177006312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177007703_177008856_177008918_177009124_177009252_177016097
ENSMUST00000108963.2	chr2	-	1050	3	FSM	ENSMUSG00000078869.3	ENSMUST00000108963.2	1050	3	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	30.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCTGATGTTATAAAG	NA	False	NA	NA	False	NA	NA	NA	176958829	176956446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_176957402_176958542_176958604_176958795
ENSMUST00000108980.9	chr2	+	1167	4	FSM	ENSMUSG00000078878.10	ENSMUST00000108980.9	1167	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	71.7696933871734	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTGCAAACACTGTGA	NA	False	NA	NA	False	NA	NA	NA	176400147	176411996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081
ENSMUST00000108981.9	chr2	+	4044	5	FSM	ENSMUSG00000078878.10	ENSMUST00000108981.9	1646	5	0	-2398	0	2398	multi-exon	FALSE	canonical	3	21	junction_2	64.6006965906715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGATGTGTTTGCGTG	NA	False	NA	NA	False	NA	NA	NA	176400120	176416004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_176400218_176403673_176403729_176410749_176410877_176411081_176411143_176412300
ENSMUST00000108985.9	chr2	+	6593	4	FSM	ENSMUSG00000078879.11	ENSMUST00000108985.9	1295	4	18	-5316	0	5316	multi-exon	FALSE	canonical	3	5	junction_3	41.4085337420521	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	176362372	176378199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_176362453_176370328_176370456_176370661_176370723_176371874
ENSMUST00000108987.8	chr11	+	4436	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.2766184179422	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATGGTGTCATTTT	NA	False	NA	16	True	ATTAAA	-18	NA	53410572	53434922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ENSMUST00000108988.9	chr8	+	3274	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_3	231.479471146212	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8827	False	NA	39	True	AATAAA	-21	NA	120637552	120684299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUST00000109007.8	chr2	+	1621	4	FSM	ENSMUSG00000078886.13	ENSMUST00000109007.8	1621	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	114.545478595476	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	175757123	175769428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_175757228_175760682_175760738_175767761_175767889_175768093
ENSMUST00000109011.8	chr2	+	1445	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	81.1432204329001	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACATTAGATTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	175661011	175671449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ENSMUST00000109021.4	chr11	-	405	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_2	2412.5	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2947	False	NA	-8	True	AATAAA	-17	NA	53321654	53319779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_53319978_53321362_53321530_53321614
ENSMUST00000109024.9	chr15	-	4109	8	FSM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_4	113.402839830547	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	5771	False	NA	-3	True	AATAAA	-15	NA	99718024	99676350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374
ENSMUST00000109035.11	chr15	-	2067	11	FSM	ENSMUSG00000023021.16	ENSMUST00000109035.11	2775	11	-3	711	0	0	multi-exon	FALSE	canonical	2	12	junction_1	103.150569557322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670346	99633472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99634318_99635427_99635535_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUST00000109042.10	chr2	+	7803	3	FSM	ENSMUSG00000078896.12	ENSMUST00000109042.10	1271	3	0	-6532	0	3698	multi-exon	FALSE	canonical	3	12	junction_2	42.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTTTC	NA	False	NA	NA	False	NA	NA	NA	175311777	175327662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_175311916_175319791_175319919_175320124
ENSMUST00000109054.3	chr2	-	4516	4	FSM	ENSMUSG00000078902.4	ENSMUST00000109054.3	4516	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	16.3571255285137	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	175017664	175008047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_175012254_175013387_175013449_175013640_175013768_175017542
ENSMUST00000109056.8	chr2	-	4743	6	FSM	ENSMUSG00000078903.11	ENSMUST00000109056.8	1956	6	0	-2787	0	-1062	multi-exon	FALSE	canonical	3	9	junction_4	88.9246872358852	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048710	175033919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
ENSMUST00000109057.8	chr11	+	2472	3	FSM	ENSMUSG00000036275.14	ENSMUST00000109057.8	2472	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	2	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTGTTAGTGTGTT	4558	False	NA	NA	False	AATAAA	-16	NA	52287254	52299555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_52287431_52293872_52294385_52297771
ENSMUST00000109058.9	chr2	-	4641	5	FSM	ENSMUSG00000078903.11	ENSMUST00000109058.9	1854	5	0	-2787	0	-1062	multi-exon	FALSE	canonical	3	35	junction_1	82.2936814099357	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175048710	175033919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175044851_175044907_175048573
ENSMUST00000109060.8	chr2	-	4926	4	FSM	ENSMUSG00000090093.9	ENSMUST00000109060.8	1911	4	0	-3015	0	2380	multi-exon	FALSE	canonical	3	26	junction_1	19.3964487013015	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174983805	174968905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174973563_174974721_174974783_174974988_174975116_174983724
ENSMUST00000109066.2	chr2	-	564	3	FSM	ENSMUSG00000078905.9	ENSMUST00000109066.2	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	14.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGCAAAAGGAACACACAG	NA	False	NA	NA	False	NA	NA	NA	174909574	174905098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174905454_174905660_174905788_174909492
ENSMUST00000109069.8	chr2	+	919	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109069.8	919	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	395.454450249611	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACATACCTTTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	174852033	174859405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174852115_174855220_174855276_174858430_174858558_174858749
ENSMUST00000109070.3	chr2	+	1281	4	FSM	ENSMUSG00000078906.10	ENSMUST00000109070.3	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	343.521307765456	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAAGACCATACAGGA	NA	False	NA	NA	False	NA	NA	NA	174852111	174861041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174852115_174858430_174858558_174858749_174858811_174859951
ENSMUST00000109071.3	chr11	-	2059	11	FSM	ENSMUSG00000000782.17	ENSMUST00000109071.3	2059	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	94.0672631684371	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCACAAGTCTAAACAATA	NA	False	NA	NA	False	NA	NA	NA	52174158	52144062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ENSMUST00000109075.8	chr2	+	2279	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_12	51.3083913254758	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257596	174269295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUST00000109084.8	chr2	+	1695	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109084.8	1695	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	245.35078968693	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174171889	174188537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174172228_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUST00000109085.8	chr2	+	1789	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109085.8	1789	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	262.324150622851	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174171798	174188537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174172228_174176004_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUST00000109086.8	chr11	-	994	7	FSM	ENSMUSG00000020390.13	ENSMUST00000109086.8	585	7	0	-409	0	409	multi-exon	FALSE	canonical	3	81	junction_6	225.904662782039	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTTTGTCACTTATTTC	NA	False	NA	-1	True	AATACA	-15	NA	51891589	51877084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119_51891189_51891503
ENSMUST00000109087.8	chr2	+	1716	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_2	91.1435159288239	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	NA	False	NA	-17	True	NA	NA	NA	174171881	174188505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUST00000109091.2	chr11	-	6099	13	FSM	ENSMUSG00000020387.16	ENSMUST00000109091.2	6099	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	6.12145589073565	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGCTGCCATGACGT	8605	False	NA	-16	True	AATAAA	-12	NA	51748223	51704286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51745706_51745795_51748137
ENSMUST00000109097.9	chr11	-	6581	23	FSM	ENSMUSG00000036391.17	ENSMUST00000109097.9	6581	23	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_21	10.4921261307612	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATGTTAGTTATTGA	3593	False	NA	-19	True	AATAAA	-18	NA	51647445	51583090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ENSMUST00000109099.4	chr8	+	4877	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	31.5066130624456	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGTGAATCTTGT	NA	False	NA	24	True	ATTAAA	-18	NA	117670131	117687184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
ENSMUST00000109102.4	chr8	-	2411	7	FSM	ENSMUSG00000031758.11	ENSMUST00000109102.4	2411	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	26.9670580935745	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTAGGAAATTTTTTTC	1769	False	NA	65	True	NA	NA	NA	117459730	117301138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117459536
ENSMUST00000109103.4	chr11	-	1437	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	0	0	0	0	multi-exon	FALSE	canonical	3	1798	junction_2	581.731405866512	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTGTTCTAGATCAGG	NA	False	NA	92	True	GGGGCT	-16	NA	51497674	51492000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ENSMUST00000109108.9	chr8	+	1771	9	FSM	ENSMUSG00000004637.16	ENSMUST00000109108.9	1771	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	40.6294228361664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAGGAAAGTGGGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	115166434	115601978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115601340
ENSMUST00000109111.2	chr11	+	1427	9	FSM	ENSMUSG00000020385.17	ENSMUST00000109111.2	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	22.366269246345	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTTGTGATTGAGTATT	NA	False	NA	13	True	AGTAAA	-13	NA	51164277	51172591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUST00000109128.8	chr11	-	2782	7	FSM	ENSMUSG00000049321.18	ENSMUST00000109128.8	2782	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	30.6630432642003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATTGTGCTGGACAGTA	NA	False	NA	NA	False	AATACA	-13	NA	50806992	50789885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50792119_50796432_50796514_50796912_50796985_50801262_50801353_50801576_50801704_50803106_50803229_50806935
ENSMUST00000109129.8	chr11	-	2803	4	FSM	ENSMUSG00000049321.18	ENSMUST00000109129.8	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	29.9777695412228	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50801637	50789538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50792119_50796912_50796985_50801262_50801353_50801576
ENSMUST00000109134.8	chr11	-	2414	5	FSM	ENSMUSG00000044296.11	ENSMUST00000109134.8	2414	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGCTTGTTTATTTATT	NA	False	NA	NA	False	ACTAAA	-25	NA	50732379	50722857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50724799_50728736_50728833_50729236_50729364_50731352_50731420_50732196
ENSMUST00000109135.9	chr11	-	5325	5	FSM	ENSMUSG00000044807.14	ENSMUST00000109135.9	5325	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	5.87367006223537	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATAAAGTGGTGAATGT	330	False	NA	NA	False	AATAAA	-17	NA	50718517	50701912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718405
ENSMUST00000109139.8	chr2	-	1905	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	405.788969169937	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	-8	True	AATATA	-16	NA	172212426	172198115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
ENSMUST00000109140.10	chr2	-	1862	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_8	140.198965759381	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTGGGTAATCATTTGA	NA	False	NA	-2	True	AATATA	-22	NA	172212455	172198109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ENSMUST00000109150.9	chr15	+	2513	13	FSM	ENSMUSG00000003352.15	ENSMUST00000109150.9	2513	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.06879570591132	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	NA	False	NA	5	True	AATAAA	-16	NA	98530256	98542410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ENSMUST00000109155.8	chr2	-	5670	7	FSM	ENSMUSG00000052056.15	ENSMUST00000109155.8	5670	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	14.599276998841	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTGTCGTGGTTTTC	NA	False	NA	-3	True	AATATA	-17	NA	169984598	169950565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169973576_169973673_169984533
ENSMUST00000109161.3	chr2	-	1009	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	185.215982031789	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTTGTTACCATT	NA	False	NA	-1	True	TATAAA	-19	NA	168797209	168776732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUST00000109162.9	chr2	-	2848	9	FSM	ENSMUSG00000027551.16	ENSMUST00000109162.9	2848	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	271.408824469655	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGTGAGCGTCATTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	168797507	168735250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUST00000109166.8	chr1	+	2412	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	0	1867	0	0	multi-exon	FALSE	canonical	3	74	junction_8	45.1526901978029	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGGATGGTTGTTACA	NA	False	NA	NA	False	AATAAA	-13	NA	183078592	183104464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ENSMUST00000109175.9	chr2	-	3729	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_27	47.3339708993171	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	NA	False	NA	-23	True	GATAAA	-16	NA	168576259	168476357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ENSMUST00000109176.8	chr2	-	3691	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109176.8	3691	28	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_27	35.3190436202576	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6461	False	NA	-23	True	GATAAA	-16	NA	168583882	168476357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ENSMUST00000109177.8	chr2	-	3456	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109177.8	3456	28	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_27	57.8025587882503	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	6290	False	NA	-23	True	GATAAA	-16	NA	168584053	168476357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168584007
ENSMUST00000109179.9	chr11	+	2125	12	FSM	ENSMUSG00000020366.19	ENSMUST00000109179.9	4682	12	20	2537	0	574	multi-exon	FALSE	canonical	3	70	junction_7	138.247771341862	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAAATTTGTGATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	49737597	49774711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ENSMUST00000109187.3	chr13	-	630	1	FSM	ENSMUSG00000078915.3	ENSMUST00000109187.3	630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCAGCCTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	45232603	45231973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_45232000_45232600
ENSMUST00000109193.8	chr2	-	1076	9	FSM	ENSMUSG00000078919.11	ENSMUST00000109193.8	1076	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	149.583118616373	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072511	168052200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072308
ENSMUST00000109198.8	chr11	+	3872	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	17.4547032821147	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGGATGGCTTTTTATT	1166	False	NA	NA	False	AATAAA	-12	NA	49094118	49109380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
ENSMUST00000109203.9	chr13	+	1525	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTAGCTGGTTAGATG	NA	False	NA	109	True	AATAAA	-36	NA	119565136	119593927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000109203.9-0	chr13	+	2455	11	FSM	ENSMUSG00000025451.16	ENSMUST00000109203.9	1525	11	-103	-827	-103	0	multi-exon	FALSE	canonical	3	93	junction_1	94.7694043454954	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	46	True	AATAAA	-31	NA	119565033	119594754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_119565177_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000109207.10	chr2	-	1727	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	108	206	0	0	multi-exon	FALSE	canonical	3	2167	junction_3	78.0555357848927	2261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9426	False	NA	NA	False	AATAAA	-22	NA	167473907	167449763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ENSMUST00000109221.9	chr2	-	4210	9	FSM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	15.1244834622542	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTAGTCGTCTCTCTG	NA	False	NA	-1	True	AGTAAA	-23	NA	167191103	167140363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
ENSMUST00000109226.5	chr13	-	1600	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTAGTTCGAGTTAC	NA	False	NA	-1	True	AATAAA	-22	NA	115226722	115224890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_115225498_115225729
ENSMUST00000109232.4	chr11	+	2547	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCAGGAATTTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	46327800	46333548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_46328019_46330632_46330803_46331389
ENSMUST00000109232.4-1	chr11	+	1436	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	-13	1124	0	70	multi-exon	FALSE	canonical	3	262	junction_1	137	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATAAAATGTTTAGAT	NA	False	NA	8	True	AATAAA	-21	NA	46327787	46332424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_46328019_46330632_46330803_46331389
ENSMUST00000109235.8	chr2	-	2282	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	-21	1308	0	389	multi-exon	FALSE	canonical	3	104	junction_8	51.6000192196774	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTTAGTCGTGTCTAC	NA	False	NA	-8	True	NA	NA	NA	166838219	166790776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUST00000109236.9	chr2	-	2860	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109236.9	2860	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	83.3006106552479	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTGTTAATTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	166838219	166790192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795266_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUST00000109238.9	chr2	-	2976	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	58.6274129884562	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTCTTTTTCCAATT	NA	False	NA	-21	True	AATAAA	-9	NA	166838185	166790066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUST00000109241.5	chr13	-	4447	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_1	0	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTTGTCTTTTATTTCTA	NA	False	NA	0	True	AATAAA	-21	NA	113755100	113728714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_113731399_113753337
ENSMUST00000109249.9	chr2	-	4580	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTTCTCAGTGGTGT	NA	False	NA	NA	False	TATAAA	-14	NA	165997583	165915008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ENSMUST00000109249.9-0	chr2	-	3755	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	0	825	0	0	multi-exon	FALSE	canonical	0	0	junction_20	203.951336107416	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165997583	165915833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ENSMUST00000109252.8	chr2	+	5757	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_19	38.1274504699546	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCCACTCATCATTTTA	NA	False	NA	16	True	ATTAAA	-22	NA	165834555	165913390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ENSMUST00000109256.11	chr15	+	1154	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAAAGTATCTTAATTA	NA	False	NA	NA	False	AATAAA	-11	NA	93296230	93387189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUST00000109256.11-0	chr15	+	3759	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	0	-2605	0	403	multi-exon	FALSE	canonical	3	108	junction_5	28.6199587843226	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296230	93389794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUST00000109260.3	chr11	+	3398	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_6	52.2164914894813	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742790	45801452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ENSMUST00000109261.11	chr11	+	3452	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	116.535881042055	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742790	45801452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ENSMUST00000109267.9	chr13	-	6978	20	FSM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_8	9.29659038560826	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTATTTTGGCTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	111945527	111882961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
ENSMUST00000109271.3	chr13	+	4143	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109271.3	4143	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	33.2927878409457	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATAAAAAATCTGCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	111822884	111854170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848222_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUST00000109272.9	chr13	+	5279	13	FSM	ENSMUSG00000032727.15	ENSMUST00000109272.9	5279	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	13.5800098183568	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGGTCGTGTGACTAT	NA	False	NA	9	True	AATAAA	-17	NA	111822711	111855130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUST00000109278.8	chr11	-	1965	8	FSM	ENSMUSG00000041278.11	ENSMUST00000109278.8	1965	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	255.299184231732	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTTCTGTACAACTTG	NA	False	NA	NA	False	NA	NA	NA	43638835	43620338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_43621435_43627241_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ENSMUST00000109284.3	chr15	+	1929	12	FSM	ENSMUSG00000078932.9	ENSMUST00000109284.3	1929	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	6.67547627297666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTCTAACATTTCCAACT	NA	False	NA	NA	False	NA	NA	NA	91115780	91145088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
ENSMUST00000109298.8	chr2	-	1991	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109298.8	1991	10	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_9	78.2020175926143	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5774	False	NA	-34	True	AATAAA	-18	NA	165129675	165118473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129603
ENSMUST00000109299.8	chr2	-	1926	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	81.2874794847746	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5774	False	NA	-34	True	AATAAA	-18	NA	165129675	165118473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125456_165129603
ENSMUST00000109300.9	chr2	-	2008	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	47.7596864973064	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTCTGGAGACTACCA	5660	False	NA	-34	True	AATAAA	-18	NA	165129789	165118473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
ENSMUST00000109307.2	chr11	-	2461	2	FSM	ENSMUSG00000042032.14	ENSMUST00000109307.2	2461	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAGGAAAACAAGTT	NA	False	NA	NA	False	AAAAAG	-8	NA	40583455	40576312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_40578623_40583304
ENSMUST00000109308.3	chr8	+	5984	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	15.9706520967386	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106786264	106857169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ENSMUST00000109313.9	chr15	-	2895	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTCCATGGGACTAC	5216	False	NA	NA	False	AATAAA	-19	NA	89310066	89300607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
ENSMUST00000109313.9-0	chr15	-	2679	19	FSM	ENSMUSG00000078937.9	ENSMUST00000109313.9	2895	19	0	216	0	-216	multi-exon	FALSE	canonical	3	54	junction_15	11.4655953418569	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5216	False	NA	NA	False	AATAAA	-22	NA	89310066	89300823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
ENSMUST00000109315.5	chr13	-	4162	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_1	22.4276614920058	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGCTCACAGTACTT	NA	False	NA	-13	True	AATAAA	-19	NA	104246122	104159564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ENSMUST00000109315.5-0	chr13	-	2519	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	0	1643	0	-115	multi-exon	FALSE	canonical	3	279	junction_1	22.4276614920058	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTTTCATATGACTGT	NA	False	NA	-20	True	TATAAA	-32	NA	104246122	104161207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ENSMUST00000109331.9	chr15	-	6497	38	FSM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_37	73.775209877053	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9143	False	NA	-5	True	AATACA	-19	NA	89064991	89039751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ENSMUST00000109333.8	chr13	-	701	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_3	81.5693297481079	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881167	100872462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
ENSMUST00000109344.9	chr2	+	429	3	FSM	ENSMUSG00000017723.12	ENSMUST00000109344.9	429	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	240.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	233	False	NA	26	True	AATAAA	-32	NA	164404618	164410430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164404725_164407711_164407859_164410254
ENSMUST00000109353.9	chr15	-	7635	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_22	13.0596920161065	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGAGTTTGCTTAATGG	NA	False	NA	NA	False	TATAAA	-16	NA	89007290	88982559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ENSMUST00000109354.10	chr11	-	1157	10	FSM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	0	0	0	0	multi-exon	FALSE	canonical	3	2877	junction_1	5620.63509877489	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGATGTATGTGACAA	NA	False	NA	-22	True	AATAAA	-15	NA	33113077	33104926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUST00000109366.8	chr11	+	3821	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	93.3590738314529	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATTGAAACTGTTAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	32592723	32696569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUST00000109375.4	chr8	+	2406	20	FSM	ENSMUSG00000014791.11	ENSMUST00000109375.4	3189	20	0	783	0	0	multi-exon	FALSE	canonical	2	9	junction_11	6.90778195396653	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGTTAAATCAGCTC	NA	False	NA	6	True	AATAAA	-17	NA	106032240	106036609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106032462_106032598_106032640_106032746_106032820_106033009_106033061_106033227_106033398_106033485_106033586_106033670_106033823_106033919_106033999_106034094_106034146_106034226_106034350_106034433_106034566_106034665_106034768_106034863_106034973_106035080_106035218_106035303_106035468_106035553_106035667_106035745_106035851_106035956_106036040_106036124_106036212_106036296
ENSMUST00000109381.9	chr15	-	5152	13	FSM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	202.393524819568	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618436	88571236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ENSMUST00000109384.10	chr2	-	1923	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_3	35.0606617165164	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5881	False	NA	-5	True	ATTAAA	-16	NA	163913089	163895459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ENSMUST00000109392.9	chr8	+	2891	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	26.6578318698277	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTCATGACTCTT	3761	False	NA	74	True	ATTAAA	-14	NA	105897320	105944613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ENSMUST00000109399.9	chr13	-	8445	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109399.9	8445	24	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_23	103.521017838	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99027548	98975526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027422
ENSMUST00000109401.8	chr13	-	8453	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCACTCTTGATTTT	NA	False	NA	-7	True	AATAAA	-15	NA	99062892	98975526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ENSMUST00000109401.8-0	chr13	-	3571	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	0	4882	0	3157	multi-exon	FALSE	canonical	3	248	junction_23	63.8650810868555	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGGTTGTACTTCTTA	NA	False	NA	-4	True	ATTAAA	-17	NA	99062892	98980408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ENSMUST00000109408.10	chr2	+	4511	5	FSM	ENSMUSG00000017679.17	ENSMUST00000109408.10	1999	5	0	-2512	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.8405728739343	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCATTGTGGTTTTTATT	5699	False	NA	NA	False	AATAAA	-17	NA	163444241	163460932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_163444335_163449131_163449595_163453678_163453873_163455654_163455766_163457282
ENSMUST00000109415.2	chr11	-	799	3	FSM	ENSMUSG00000044502.17	ENSMUST00000109415.2	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	17	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTGAAATTGCTTACAC	NA	False	NA	NA	False	NA	NA	NA	31621727	31616486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_31616934_31619243_31619369_31621500
ENSMUST00000109418.2	chr2	-	3967	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCGGAGTTTGCTGTGT	NA	False	NA	-8	True	ATTAAA	-25	NA	163314549	163308298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_163312039_163314322
ENSMUST00000109430.2	chr11	+	2926	2	FSM	ENSMUSG00000043999.7	ENSMUST00000109430.2	2926	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTGTGTTACCTGCAC	4064	False	NA	NA	False	AATAAA	-24	NA	30835357	30843729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_30835543_30840988
ENSMUST00000109432.4	chr15	+	2273	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_14	63.5701845785187	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTACCTTGGTTT	NA	False	NA	35	True	AATAAA	-25	NA	85090205	85136086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ENSMUST00000109444.3-1	chr13	+	4009	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	11	1265	0	887	multi-exon	FALSE	canonical	3	32	junction_10	9.39081998549647	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATTTTATTTTGCAAT	NA	False	NA	13	True	AAAAAG	-19	NA	96679253	96775410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ENSMUST00000109454.8	chr2	-	3396	4	FSM	ENSMUSG00000050700.12	ENSMUST00000109454.8	3396	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.64279609239471	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTTTTCTTCACTA	NA	False	NA	NA	False	ATTAAA	-15	NA	160754237	160748356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_160751096_160751526_160751751_160752661_160752785_160753927
ENSMUST00000109462.8	chr2	+	5107	32	FSM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_13	22.7747418375012	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTAACTTGTTTGTT	NA	False	NA	16	True	AATAAA	-17	NA	160573652	160605206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ENSMUST00000109468.3	chr2	+	3856	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_7	40.333949719808	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160487807	160564684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUST00000109478.9	chr2	+	3284	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_9	12.5862106454921	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTCTCCTGTCTGTGG	NA	False	NA	28	True	AGTAAA	-19	NA	158636726	158700134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ENSMUST00000109486.9	chr2	+	8383	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGTGCTTTTGGTT	NA	False	NA	29	True	ATTAAA	-26	NA	158251767	158341173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ENSMUST00000109486.9-0	chr2	+	5990	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	28	2365	0	-758	multi-exon	FALSE	canonical	3	76	junction_9	18.0033026432432	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTGGTTTGAGGTTTC	NA	False	NA	16	True	ATTAAA	-18	NA	158251795	158338808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ENSMUST00000109504.8	chr11	-	1642	12	FSM	ENSMUSG00000064090.15	ENSMUST00000109504.8	1642	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_9	9.82407230705347	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAGAGAAAGAGAGAGAA	NA	False	NA	75	True	NA	NA	NA	26541729	26421321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUST00000109518.8	chr2	+	3716	8	FSM	ENSMUSG00000027651.17	ENSMUST00000109518.8	4399	8	-204	887	0	-887	multi-exon	FALSE	canonical	2	5	junction_6	76.3520310997764	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870416	157919240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157912480_157912577_157916849
ENSMUST00000109521.4	chr8	+	1580	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGCTTTAATTGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	95584077	95590870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUST00000109521.4-0	chr8	+	1186	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	68	326	0	175	multi-exon	FALSE	canonical	3	1933	junction_5	86.4056566435323	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATCGTGCCACTAAC	NA	False	NA	32	True	AATAAA	-23	NA	95584145	95590544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUST00000109522.2	chr2	-	3765	7	FSM	ENSMUSG00000027650.13	ENSMUST00000109522.2	3765	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	11.8977121983832	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTCTTGATGAGAGA	NA	False	NA	-17	True	NA	NA	NA	157851282	157823731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938
ENSMUST00000109523.2	chr2	+	1363	4	FSM	ENSMUSG00000037843.7	ENSMUST00000109523.2	1363	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.49443825784929	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGGCAGTGCCTTGCTGA	NA	False	NA	5	True	AATAAA	-15	NA	157756572	157786639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157756852_157777244_157777415_157779110_157779162_157785776
ENSMUST00000109528.9	chr2	-	2056	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	NA	False	NA	-12	True	AATAAA	-16	NA	157408257	157398281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_157400248_157408167
ENSMUST00000109531.8	chr2	+	3586	12	FSM	ENSMUSG00000027646.16	ENSMUST00000109531.8	3586	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.415539739926	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTCAGCAGTTTATTG	NA	False	NA	10	True	ATTAAA	-16	NA	157297590	157313758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157297688_157299000_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ENSMUST00000109532.9	chr11	-	4106	21	FSM	ENSMUSG00000042208.16	ENSMUST00000109532.9	4106	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_20	26.5082534317144	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAATTGTGGAGAAAGT	NA	False	NA	-15	True	AATAAA	-9	NA	23583639	23523787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579120_23583480
ENSMUST00000109547.2	chr8	+	2847	21	FSM	ENSMUSG00000032939.15	ENSMUST00000109547.2	2847	21	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_4	53.8961037552809	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGCAAGGAATCAAAGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	94954288	95041694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUST00000109551.8	chr11	+	4906	26	FSM	ENSMUSG00000020290.15	ENSMUST00000109551.8	4906	26	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	458.823200808329	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCACTGTGGGGTTTAG	NA	False	NA	NA	False	NA	NA	NA	23206040	23247597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_23206163_23206645_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUST00000109552.3	chr13	-	4563	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_11	23.7235232534199	446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTAGATCCATAAAGCAT	NA	False	NA	NA	False	AATAAA	-29	NA	85437148	85362898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ENSMUST00000109553.10	chr15	+	4403	4	FSM	ENSMUSG00000022389.16	ENSMUST00000109553.10	4403	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	32.8870119584549	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTGGTCTTTTCTG	NA	False	NA	17	True	ATTAAA	-17	NA	81686621	81711064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81687088_81699144_81699463_81705399_81705621_81707666
ENSMUST00000109554.3	chr15	+	5740	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_21	52.4698457282257	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTAGCCTTTGTTCT	1948	False	NA	4	True	AATAAA	-15	NA	81629257	81680461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ENSMUST00000109556.9	chr8	+	5310	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	14.2971928091574	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGGTGGTAATTTATA	NA	False	NA	7	True	AATAAA	-17	NA	94763825	94794549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ENSMUST00000109566.9	chr2	+	1595	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	73.2575365861197	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTAGAACCTTTTCCC	NA	False	NA	NA	False	NA	NA	NA	156562964	156605044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUST00000109570.8	chr2	+	2766	5	FSM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.1190299365173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCCTGTGTGAGTCTC	NA	False	NA	7	True	ATTAAA	-18	NA	156389503	156410076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156389804_156391804_156391948_156392568_156393370_156397746_156397977_156408784
ENSMUST00000109574.8	chr2	+	5904	21	FSM	ENSMUSG00000027624.21	ENSMUST00000109574.8	5904	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	32.516303602962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	7780	False	NA	13	True	AATAAA	-28	NA	156262967	156385134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ENSMUST00000109577.9	chr2	+	6251	22	FSM	ENSMUSG00000027624.21	ENSMUST00000109577.9	6251	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_14	33.5816600417023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGACTCCCTCAGCCTC	7844	False	NA	13	True	AATAAA	-28	NA	156263031	156385134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ENSMUST00000109577.9-0	chr2	+	3940	22	FSM	ENSMUSG00000027624.21	ENSMUST00000109577.9	6251	22	-60	2371	0	857	multi-exon	FALSE	canonical	3	36	junction_14	33.5816600417023	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAATTACCTGACTG	7784	False	NA	22	True	AATAAA	-32	NA	156262971	156382763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ENSMUST00000109578.8	chr11	+	4273	23	FSM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	56.2718460791631	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTAAAAGGCAACTTTTT	NA	False	NA	19	True	AATAAA	-15	NA	21189280	21271122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUST00000109579.9	chr15	-	4154	13	FSM	ENSMUSG00000042292.19	ENSMUST00000109579.9	4154	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	17.401309018449	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGCCAGTCTGTTGTA	NA	False	NA	-13	True	AATAAA	-11	NA	80989284	80896491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_80988973
ENSMUST00000109587.9	chr2	-	2810	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTTTTTCAAATGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	156022158	155989158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUST00000109587.9-0	chr2	-	2083	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	26	701	0	0	multi-exon	FALSE	canonical	3	1358	junction_5	409.933526432945	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022132	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUST00000109594.8	chr11	-	3926	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_4	11.5440593433354	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTGTCTTTGAGTCC	7761	False	NA	20	True	NA	NA	NA	20282713	20252179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ENSMUST00000109596.8	chr11	-	2171	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	18.3726850393609	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTAGCTCAGTTGACT	3055	False	NA	-8	True	AATAAA	-17	NA	20199418	20188385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
ENSMUST00000109598.4	chr2	+	362	3	FSM	ENSMUSG00000067847.14	ENSMUST00000109598.4	362	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	492.5	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCGTTATATCAGTCT	6549	False	NA	3	True	AATAAA	-8	NA	155986156	155987703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155986206_155986378_155986510_155987521
ENSMUST00000109600.2	chr2	-	709	3	FSM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	22	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCGCGGGTCAATGGGAC	3112	False	NA	0	True	TTTAAA	-6	NA	155986100	155983706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155984163_155985286_155985379_155985939
ENSMUST00000109605.5	chr15	+	1725	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_2	43	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4145	False	NA	32	True	AATAAA	-20	NA	80139384	80141742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80139887_80140407_80140723_80140834
ENSMUST00000109606.3	chr13	-	1676	5	FSM	ENSMUSG00000021589.14	ENSMUST00000109606.3	1676	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	10.5948100502085	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGGTCGTTTTATGTT	6588	False	NA	NA	False	AATAAA	-24	NA	76092044	76060860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ENSMUST00000109607.10	chr2	-	3441	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_15	28.8510350286124	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953859	155913764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
ENSMUST00000109608.9	chr2	-	3492	17	FSM	ENSMUSG00000074643.13	ENSMUST00000109608.9	3492	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_15	81.3740399328926	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGGCCGCTCTTGT	NA	False	NA	-5	True	AATAAA	-16	NA	155953863	155913766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
ENSMUST00000109609.9	chr8	-	1171	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	96.0081015100057	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGGCTATCAGTGTTG	NA	False	NA	-9	True	AGTAAA	-12	NA	91860651	91851096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
ENSMUST00000109609.9-0	chr8	-	1756	10	FSM	ENSMUSG00000031667.17	ENSMUST00000109609.9	1171	10	-4	-581	0	-319	multi-exon	FALSE	canonical	3	139	junction_9	96.0081015100057	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860655	91850515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
ENSMUST00000109615.8	chr15	-	3241	6	FSM	ENSMUSG00000053411.17	ENSMUST00000109615.8	710	6	-228	-2303	0	0	multi-exon	FALSE	canonical	3	216	junction_5	106.136892737634	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816969	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUST00000109616.9	chr15	-	2899	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816853	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUST00000109616.9-0	chr15	-	3015	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	-116	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	127.989582909444	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816969	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUST00000109620.10	chr15	+	2459	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	8251	False	NA	NA	False	NA	NA	NA	79776608	79792630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUST00000109621.10	chr8	-	3356	7	FSM	ENSMUSG00000043668.14	ENSMUST00000109621.10	3356	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.82842712474619	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGGTCCCTTGACT	NA	False	NA	NA	False	AATAAA	-16	NA	91074971	90973667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_90975646_90979279_90979361_90980902_90981131_90984502_90984773_90996856_90997112_91001259_91001323_91074490
ENSMUST00000109625.8	chr15	-	3056	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109625.8	3056	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	62.5114989421946	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79718438	79710341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79713126_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ENSMUST00000109626.4	chr8	+	7945	16	FSM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	9.78888258292142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCTTGATTTCTTCAG	4617	False	NA	NA	False	ATTAAA	-19	NA	89431849	89478573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUST00000109627.8	chr15	-	5806	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCCCCCTGGATGGGG	NA	False	NA	-4	True	AATAAA	-22	NA	79718889	79708096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ENSMUST00000109627.8-0	chr15	-	3194	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	408	2204	0	0	multi-exon	FALSE	canonical	3	119	junction_1	17.0367250374008	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	79718481	79710300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ENSMUST00000109632.8	chr2	-	2313	9	FSM	ENSMUSG00000005882.19	ENSMUST00000109632.8	2313	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.423328270862	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCCTGGAATGGATG	NA	False	NA	-33	True	AATAAA	-18	NA	155771963	155688815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155690447_155693278_155693393_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUST00000109636.11	chr2	-	2633	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACTTTACTGTGTG	NA	False	NA	-58	True	NA	NA	NA	155772230	155688840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUST00000109636.11-0	chr2	-	1357	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	250	1026	0	0	multi-exon	FALSE	canonical	3	315	junction_1	57.3294572333165	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTTTCTTTGTTCCA	NA	False	NA	-4	True	ATTAAA	-20	NA	155771980	155689866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUST00000109638.2	chr2	-	1382	2	FSM	ENSMUSG00000027613.16	ENSMUST00000109638.2	1382	2	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTCCTTATGAAATG	NA	False	NA	NA	False	AATAAA	-16	NA	155668583	155667085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155668131_155668246
ENSMUST00000109650.8	chr11	-	5271	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_8	114.138895649117	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414859	12186675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUST00000109651.9	chr11	-	5541	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_9	120.525034842014	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414960	12186677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUST00000109654.8	chr11	-	4755	16	FSM	ENSMUSG00000020176.18	ENSMUST00000109654.8	4755	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	17.5529674604229	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTCCTGTCGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	11977971	11880507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_11883610_11884198_11884293_11886717_11886806_11887000_11887068_11887806_11887924_11888409_11888485_11893881_11893981_11894815_11894927_11895494_11895633_11895963_11896033_11896686_11896803_11901502_11901660_11917531_11917686_11920422_11920643_11937595_11937675_11977902
ENSMUST00000109655.9	chr8	-	4907	8	FSM	ENSMUSG00000045333.16	ENSMUST00000109655.9	4907	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	4.95695759225642	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGCCTGGTTCTCTCCTC	NA	False	NA	NA	False	AATAAA	-22	NA	88686223	88388437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_88389136_88413056_88413173_88414583_88414716_88500194_88500280_88506826_88510042_88585911_88586113_88631116_88631177_88685823
ENSMUST00000109664.2	chr11	-	2807	3	FSM	ENSMUSG00000035455.13	ENSMUST00000109664.2	2807	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	194	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGCAAGATGTAATCTT	NA	False	NA	NA	False	AATAAA	-11	NA	11758932	11750551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_11753064_11755958_11756216_11758894
ENSMUST00000109682.9	chr2	+	684	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	1428	junction_1	142.385236438177	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGTGTCTTTACTAGA	NA	False	NA	19	True	AGTAAA	-21	NA	155078454	155092197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
ENSMUST00000109685.8	chr2	+	5309	26	FSM	ENSMUSG00000027598.17	ENSMUST00000109685.8	5309	26	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	35.1837689851443	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATTTGCCTTTTCGTCTG	NA	False	NA	55	True	AATAAA	-15	NA	154975478	155068773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154975506_154980115_154980193_154999693_154999896_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUST00000109687.9	chr15	+	2570	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_8	26.3687999246734	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCTCTGTGGATGCTG	NA	False	NA	9	True	AATAAA	-13	NA	78867240	78890064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ENSMUST00000109698.9	chr15	+	1923	18	FSM	ENSMUSG00000022436.17	ENSMUST00000109698.9	1923	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_17	114.336569876277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4398	False	NA	87	True	AATAAA	-20	NA	78783967	78796251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78796129
ENSMUST00000109699.11	chr13	+	2834	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	0	0	0	0	multi-exon	FALSE	canonical	3	1529	junction_7	132.889457914055	3476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760134	69782453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUST00000109701.10	chr2	+	1709	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	30.0557305480255	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCTGAGGTGGAATGGT	NA	False	NA	7	True	AATAAA	-17	NA	154633015	154709165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUST00000109702.2	chr2	+	3162	15	FSM	ENSMUSG00000059842.13	ENSMUST00000109702.2	3162	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.5749982160692	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAATAAATGTTTTTACCA	5795	False	NA	-18	True	NA	NA	NA	154455289	154488698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154455323_154463672_154463784_154466774_154466972_154468697_154468848_154469807_154470054_154470719_154470895_154472328_154472420_154474198_154474390_154476006_154476198_154479933_154480143_154483235_154483333_154483901_154484035_154485408_154485521_154485706_154485778_154487543
ENSMUST00000109723.8	chr12	+	2790	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109723.8	2790	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	159.513474278677	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9323	False	NA	24	True	ATTAAA	-41	NA	113061897	113100826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086860_113090399_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ENSMUST00000109725.8	chr2	+	6080	11	FSM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_9	126.860553364708	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	5303	False	NA	37	True	AATAAA	-27	NA	154278400	154381276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUST00000109726.8	chr12	+	2775	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109726.8	2775	20	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_16	163.105730200924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9323	False	NA	24	True	ATTAAA	-41	NA	113061897	113100826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUST00000109727.9	chr12	+	2789	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_4	117.588629860953	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGCCCTTCTGCGTCTT	9323	False	NA	23	True	ATTAAA	-40	NA	113061897	113100825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ENSMUST00000109728.8	chr2	-	2131	8	FSM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_7	15.9808558939138	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTGTGGTTTGTGTC	NA	False	NA	1	True	AATAAA	-30	NA	154250019	154218232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
ENSMUST00000109734.8	chr8	+	982	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	107	523	0	0	multi-exon	FALSE	canonical	3	308	junction_1	1434.62463383284	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAAGTCTGTGTTGGTGT	NA	False	NA	13	True	AATAAA	-13	NA	85696322	85700940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000109736.9	chr8	-	2981	10	FSM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	446.653979919331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTATGTTATCTATTT	4554	False	NA	-7	True	NA	NA	NA	85696369	85683238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
ENSMUST00000109736.9-0	chr8	-	1705	10	FSM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	219	1057	60	0	multi-exon	FALSE	canonical	3	62	junction_9	446.653979919331	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	4773	False	NA	-8	True	AATAAA	-14	NA	85696150	85684295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
ENSMUST00000109737.9	chr11	-	1633	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	0	0	0	0	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTCCTGGTCCTGA	NA	False	NA	-5	True	AATAAA	-24	NA	6394443	6377228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ENSMUST00000109737.9-0	chr11	-	724	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	0	909	0	0	multi-exon	FALSE	canonical	3	3133	junction_4	74.0485482639599	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTGTCTCAGTATTTC	NA	False	NA	-3	True	GATAAA	-16	NA	6394443	6378137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ENSMUST00000109738.10	chr8	-	2044	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	0	0	0	0	multi-exon	FALSE	canonical	3	1021	junction_5	82.5459674041917	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTATGTTATCTATTT	8283	False	NA	-7	True	NA	NA	NA	85692640	85683238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUST00000109742.11	chr13	-	2416	4	FSM	ENSMUSG00000058883.17	ENSMUST00000109742.11	2416	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.68331255192114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	False	NA	1	True	AATAAA	-20	NA	67229576	67217462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67229513
ENSMUST00000109745.8	chr8	-	2114	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATACTTTGGCTTCTCAA	NA	False	NA	-5	True	AATAAA	-9	NA	85620550	85613021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ENSMUST00000109745.8-1	chr8	-	1919	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	0	195	0	-195	multi-exon	FALSE	canonical	3	204	junction_11	27.3803935401452	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAGGACTGGACTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	85620550	85613216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ENSMUST00000109748.9	chr15	-	2049	3	FSM	ENSMUSG00000005354.17	ENSMUST00000109748.9	2049	3	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_2	38	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTACCTCTTGCTGTGAA	2753	False	NA	-7	True	AATAAA	-16	NA	77813168	77799409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_77800058_77808742_77808867_77811891
ENSMUST00000109754.2	chr8	+	1795	13	FSM	ENSMUSG00000003808.19	ENSMUST00000109754.2	1795	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_9	182.281585435526	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583645	85595886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594381_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUST00000109755.5	chr12	+	531	3	FSM	ENSMUSG00000064326.14	ENSMUST00000109755.5	333	3	-90	-108	-90	0	multi-exon	FALSE	canonical	3	90	junction_1	805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7053	False	NA	17	True	AATAAA	-17	NA	112611310	112615579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112611519_112614258_112614416_112615413
ENSMUST00000109761.9	chr8	-	1842	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_3	246.139156525328	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCTTCTCACAGCTGT	NA	False	NA	-14	True	AATAAA	-37	NA	85567294	85561539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUST00000109767.9	chr8	+	2138	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	116.091541869983	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTCATTTTGAATTGG	NA	False	NA	15	True	AATAAA	-15	NA	85415875	85426416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUST00000109768.9	chr8	+	2044	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	132.785409001705	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGTCATTTTGAATTG	NA	False	NA	14	True	AATAAA	-14	NA	85415892	85426415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUST00000109769.10	chr13	-	2886	14	FSM	ENSMUSG00000033102.16	ENSMUST00000109769.10	2886	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	22.3145877936915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	64396456	64343171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ENSMUST00000109771.2	chr2	+	4211	23	FSM	ENSMUSG00000027478.16	ENSMUST00000109771.2	3630	23	-167	-414	0	0	multi-exon	FALSE	canonical	3	48	junction_1	22.8903242036621	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491369	153529650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ENSMUST00000109772.8	chr2	+	4015	21	FSM	ENSMUSG00000027478.16	ENSMUST00000109772.8	4015	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	23.6207535866238	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491373	153529650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ENSMUST00000109774.9	chr2	+	4320	24	FSM	ENSMUSG00000027478.16	ENSMUST00000109774.9	4320	24	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	28.4266708280574	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491372	153529650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153525527_153525598_153526278_153526398_153528177
ENSMUST00000109782.2	chr2	-	1343	10	FSM	ENSMUSG00000056941.18	ENSMUST00000109782.2	1343	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	72.7254264636584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGCTCTGAATCCA	NA	False	NA	-19	True	ATTAAA	-17	NA	153474660	153460753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474107_153474183_153474513
ENSMUST00000109784.2	chr2	-	5610	8	FSM	ENSMUSG00000061411.13	ENSMUST00000109784.2	5610	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	27.1496232168391	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACACTGAGCTTCGACT	NA	False	NA	NA	False	AATAAA	-15	NA	153286399	153249385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153286276
ENSMUST00000109785.2	chr11	+	3542	17	FSM	ENSMUSG00000041164.16	ENSMUST00000109785.2	3542	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	86.7373009437116	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTCATTTCCACCCTGC	NA	False	NA	NA	False	NA	NA	NA	6345604	6355930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUST00000109787.8	chr11	+	4116	20	FSM	ENSMUSG00000041164.16	ENSMUST00000109787.8	4116	20	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_1	72.0482679083075	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCAGGATATCCCT	4623	False	NA	15	True	AATAAA	-18	NA	6339073	6356158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6339141_6345124_6345289_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUST00000109790.2	chr2	+	6968	13	FSM	ENSMUSG00000042548.15	ENSMUST00000109790.2	6968	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.2451812163391	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCCTTGTCATCTGT	NA	False	NA	7	True	AATAAA	-16	NA	153187764	153245927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153188311_153194108_153194192_153196569_153196573_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ENSMUST00000109793.3	chr15	+	920	2	FSM	ENSMUSG00000055041.9	ENSMUST00000109793.3	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAGTAAACAGCTGGGCT	NA	False	NA	NA	False	NA	NA	NA	76784135	76785391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76784216_76784551
ENSMUST00000109802.3	chr8	-	2867	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_15	26.9886235749276	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467802	84449992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUST00000109805.8	chr11	-	2635	3	FSM	ENSMUSG00000053838.15	ENSMUST00000109805.8	2635	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	171	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGTTCTGTCTGTGA	NA	False	NA	-6	True	AATAAA	-14	NA	6069409	6055985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6058356_6063242_6063432_6069333
ENSMUST00000109810.2	chr8	+	1794	11	FSM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	682.0140834323	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAACGTGCCATCTTTTT	NA	False	NA	99	True	NA	NA	NA	84442176	84449977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUST00000109816.8	chr2	+	3483	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTCTTGTTGTCCTAG	2708	False	NA	NA	False	NA	NA	NA	152689897	152736574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000109816.8-0	chr2	+	2755	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	104	624	0	-624	multi-exon	FALSE	canonical	3	597	junction_2	86.1429969118501	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2812	False	NA	29	True	AATAAA	-28	NA	152690001	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000109820.5	chr2	-	2568	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	91.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCACAGCCTTGGCTCT	NA	False	NA	-9	True	AATAAA	-18	NA	152672586	152622591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152624203_152671346_152672023_152672305
ENSMUST00000109830.9	chr13	-	2879	18	FSM	ENSMUSG00000021557.16	ENSMUST00000109830.9	2879	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	6.94416685335233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATTTGACTTTATGCA	1080	False	NA	NA	False	ATTAAA	-19	NA	59705100	59641213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59641685_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ENSMUST00000109831.3	chr8	+	2293	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	6.81834260787527	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGAGCCAAGAGATTCG	NA	False	NA	12	True	AATAAA	-18	NA	84116506	84153460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ENSMUST00000109831.3-0	chr8	+	4025	15	FSM	ENSMUSG00000002190.14	ENSMUST00000109831.3	2293	15	-11	-1721	0	0	multi-exon	TRUE	canonical	3	23	junction_5	6.81834260787527	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTGTCTTGCTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	84116495	84155181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84116730_84122071_84122222_84123630_84123708_84124277_84124337_84126577_84126720_84134782_84134865_84136114_84136308_84136978_84137169_84146832_84146947_84147047_84147199_84149649_84149866_84150701_84150828_84151199_84151363_84152153_84152255_84153154
ENSMUST00000109832.3	chr12	+	4108	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_12	229.453638502906	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	4921	False	NA	3	True	AATAAA	-17	NA	110452172	110549496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ENSMUST00000109837.8	chr11	-	2697	11	FSM	ENSMUSG00000020474.12	ENSMUST00000109837.8	2697	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	11.9620232402382	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTTTTACAAGTTTTA	607	False	NA	NA	False	AATAAA	-19	NA	5787789	5777859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5779116_5779310_5779394_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
ENSMUST00000109844.11	chr12	+	1703	5	FSM	ENSMUSG00000040856.18	ENSMUST00000109844.11	1703	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	4.02336923485777	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGTAACAGAACCAGGAC	NA	False	NA	NA	False	TATAAA	-24	NA	109419380	109426626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_109419653_109420910_109420975_109421418_109421550_109423999_109424142_109425532
ENSMUST00000109845.8	chr11	+	2001	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_7	40.5239126936183	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTCAGCCCATCCAT	NA	False	NA	-29	True	NA	NA	NA	5738487	5750629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUST00000109847.9	chr2	-	2384	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_6	68.3604931579153	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174332	152158253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUST00000109847.9-0	chr2	-	1884	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	0	500	0	-500	multi-exon	FALSE	canonical	3	444	junction_6	68.3604931579153	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGACGATGGTGGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	152174332	152158753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUST00000109848.10	chr12	-	2831	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	0	0	0	0	multi-exon	FALSE	canonical	3	1835	junction_9	109.614475929657	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860100	108825955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ENSMUST00000109860.8	chr12	+	4160	22	FSM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	3.09120616516523	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTATTGACCTACGTT	NA	False	NA	NA	False	AATAAA	-14	NA	108389074	108505823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_108389521_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUST00000109861.8	chr2	+	2590	5	FSM	ENSMUSG00000027463.15	ENSMUST00000109861.8	2590	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	23.0976189249022	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCAAACTACTTAAAC	NA	False	NA	-18	True	NA	NA	NA	151841784	151851142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151841859_151845971_151846599_151847451_151847940_151849400_151849525_151849865
ENSMUST00000109864.8	chr2	-	1591	2	FSM	ENSMUSG00000027459.17	ENSMUST00000109864.8	1591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGACTCTTCTCTGC	NA	False	NA	-1	True	AATAAA	-22	NA	151815886	151811317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_151812845_151815822
ENSMUST00000109867.8	chr11	-	3307	9	FSM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	0	3004	0	-726	multi-exon	FALSE	canonical	3	15	junction_1	9.67923034130297	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTACCAACTTCTGTTGA	6432	False	NA	NA	False	AATATA	-16	NA	5394847	5229327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ENSMUST00000109868.4	chr13	+	715	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	0	747	0	0	multi-exon	FALSE	canonical	3	143	junction_3	23.6220236220354	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCGGGCTGTACTGTAAA	NA	False	NA	2	True	NA	NA	NA	58305467	58311760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
ENSMUST00000109869.2	chr2	-	1384	8	FSM	ENSMUSG00000032869.16	ENSMUST00000109869.2	1384	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	118.814896338114	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCCACGCTCCTTTTT	NA	False	NA	-28	True	AATACA	-15	NA	151586106	151560184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930_151583075_151585922
ENSMUST00000109876.8	chr13	+	2371	7	FSM	ENSMUSG00000021540.17	ENSMUST00000109876.8	4570	7	364	1835	-252	-868	multi-exon	FALSE	canonical	3	10	junction_1	28.5856413062378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATTTGTTGTAAGTCC	NA	False	NA	NA	False	TTTAAA	-23	NA	56851228	56885938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_56851390_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ENSMUST00000109895.2	chr11	-	2530	6	FSM	ENSMUSG00000034201.14	ENSMUST00000109895.2	2530	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	36.2049720342386	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACAGTTTTTGCATTTGT	NA	False	NA	-9	True	AAGAAA	-16	NA	5015277	5010380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ENSMUST00000109896.8	chr2	-	5093	24	FSM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	8.5081968705865	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAAAGTTTTAAATT	7563	False	NA	2	True	ATTAAA	-18	NA	150851318	150776438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ENSMUST00000109901.9	chr12	+	4380	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	0	0	0	0	multi-exon	FALSE	canonical	3	846	junction_12	378.82265398812	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTAAGTAGTGTCTCAT	NA	False	NA	NA	False	NA	NA	NA	105750952	105805066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ENSMUST00000109905.5	chr13	+	1420	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	31.3847096529504	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCGTGGTTACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	55740981	55745510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
ENSMUST00000109908.8	chr11	-	2012	15	FSM	ENSMUSG00000009073.17	ENSMUST00000109908.8	2012	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	96.3280958018808	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGACTTATGCCCAAGG	6705	False	NA	NA	False	AATAAA	-21	NA	4783133	4731936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4782997
ENSMUST00000109910.9	chr11	-	4720	16	FSM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	67.5504749551524	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	8845	False	NA	-8	True	AATAAA	-21	NA	4799536	4715844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ENSMUST00000109914.2	chr2	-	2734	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAAGAAAAAAAATCCAC	NA	False	NA	NA	False	NA	NA	NA	150327011	150312910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
ENSMUST00000109914.2-0	chr2	-	2331	4	FSM	ENSMUSG00000074731.4	ENSMUST00000109914.2	2734	4	0	403	0	-403	multi-exon	FALSE	canonical	3	25	junction_1	6.12825877028341	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAATTGTTAGGGGC	NA	False	NA	NA	False	AATAAA	-11	NA	150327011	150313313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150315345_150316415_150316477_150316675_150316803_150326899
ENSMUST00000109916.8	chr2	-	2922	4	FSM	ENSMUSG00000068130.12	ENSMUST00000109916.8	2922	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.29983164553722	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	150293406	150249060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150251710_150252860_150252922_150253130_150253258_150293321
ENSMUST00000109921.9	chr13	-	2378	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	11.9649389180894	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTAGCTTAGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	55635874	55621756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ENSMUST00000109922.2	chr2	+	3018	4	FSM	ENSMUSG00000079008.3	ENSMUST00000109922.2	3018	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	13.8804418757713	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAAGAAAAAAATCCACA	NA	False	NA	NA	False	NA	NA	NA	150099436	150112220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_150099549_150108044_150108172_150108370_150108432_150109502
ENSMUST00000109929.3	chr2	+	1485	3	FSM	ENSMUSG00000079009.9	ENSMUST00000109929.3	1485	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	15	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTTTCAAATGTCACAA	NA	False	NA	NA	False	NA	NA	NA	150032312	150035072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_150032440_150032638_150032700_150033775
ENSMUST00000109935.8	chr2	+	2050	4	FSM	ENSMUSG00000074736.11	ENSMUST00000109935.8	2050	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	14.290634073484	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATGATTTACTTCATG	NA	False	NA	NA	False	NA	NA	NA	149672707	149846312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_149672846_149741337_149741896_149772824_149772963_149845096
ENSMUST00000109936.3	chr12	-	3226	13	FSM	ENSMUSG00000021097.16	ENSMUST00000109936.3	11866	13	0	8640	0	0	multi-exon	FALSE	canonical	3	35	junction_6	8.27143679578504	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCGGAGTCTTTCTA	NA	False	NA	-24	True	AATAAA	-15	NA	104831335	104738015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ENSMUST00000109937.9	chr12	-	3319	14	FSM	ENSMUSG00000021097.16	ENSMUST00000109937.9	3529	14	-67	277	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	16.3518994427135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGGCGGAGTCTTTCTA	NA	False	NA	-24	True	AATAAA	-15	NA	104831335	104738015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_104738223_104739440_104739534_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ENSMUST00000109940.2	chr8	+	2656	7	FSM	ENSMUSG00000034518.15	ENSMUST00000109940.2	2656	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.0489284084689	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACAGTTGTATAAAGAAA	NA	False	NA	-33	True	AATAAA	-25	NA	75742849	75758541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_75743035_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUST00000109943.10	chr11	-	5674	18	FSM	ENSMUSG00000034354.18	ENSMUST00000109943.10	5674	18	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_2	25.6297837124855	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACGAGTTCTAATTCTTT	NA	False	NA	-12	True	AATAAA	-27	NA	4544815	4430867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ENSMUST00000109946.9	chr15	-	5545	37	FSM	ENSMUSG00000022568.18	ENSMUST00000109946.9	5545	37	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	94.8852580296751	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941633	75919006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75919387_75919469_75919522_75919770_75919846_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ENSMUST00000109948.8	chr11	-	1969	11	FSM	ENSMUSG00000020419.12	ENSMUST00000109948.8	1969	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	71.4409546408781	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATAATTTATGT	NA	False	NA	-20	True	AATAAA	-11	NA	4390745	4295813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4370703_4370731_4371588_4371610_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390482
ENSMUST00000109950.5	chr8	+	1024	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	27.2197844713485	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTTATGTGCAGCAGT	NA	False	NA	24	True	AATAAA	-21	NA	73449912	73466534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ENSMUST00000109961.8	chr2	+	1116	3	FSM	ENSMUSG00000036992.11	ENSMUST00000109961.8	1116	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	28	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	False	NA	15	True	AATAAA	-19	NA	148514520	148517947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_148514756_148516383_148516519_148517201
ENSMUST00000109966.8	chr15	+	1803	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	7.71722460186015	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCCTGTTCTTCAGCC	NA	False	NA	11	True	AATAAA	-16	NA	75840971	75847598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
ENSMUST00000109989.10	chr11	-	1949	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	32.7813557369218	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882044	3867191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
ENSMUST00000109990.8	chr11	-	1914	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109990.8	1914	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	47.7330540029071	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3881960	3867191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881926
ENSMUST00000109991.8	chr11	-	1943	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109991.8	1943	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	47.4250545858319	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACGTAGAGTCCTGGT	NA	False	NA	-11	True	ATTAAA	-17	NA	3882078	3867191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3882012
ENSMUST00000109994.9	chr13	+	3827	15	FSM	ENSMUSG00000025876.16	ENSMUST00000109994.9	3827	15	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	2.26778683805536	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGAGTGTCGCTTCTCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	55097223	55153831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55097545_55138692_55138915_55143609_55143754_55143972_55144077_55144216_55144398_55145728_55145894_55147148_55147338_55147434_55147738_55150278_55150367_55150645_55150815_55150995_55151230_55151354_55151505_55151590_55151756_55152290_55152470_55152618
ENSMUST00000109997.10	chr8	+	2713	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	51.1468474101777	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704914	72724177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
ENSMUST00000110000.8	chr2	+	1142	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_2	184.608775522725	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTAATCATCCCTGTC	NA	False	NA	31	True	TATAAA	-16	NA	145745160	145758345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
ENSMUST00000110001.4	chr12	-	3063	9	FSM	ENSMUSG00000041645.15	ENSMUST00000110001.4	3063	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	279.990624843047	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGAGGGTGTTGCAGT	NA	False	NA	-13	True	ATTAAA	-19	NA	103392039	103374241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391784
ENSMUST00000110002.8	chr8	+	3152	3	FSM	ENSMUSG00000089857.10	ENSMUST00000110002.8	3152	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCTAGTGAAATTATTTA	NA	False	NA	NA	False	AATAAA	-1	NA	72662451	72670198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72662583_72666965_72667093_72667304
ENSMUST00000110009.4	chr15	-	3054	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	19	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTATGTGCCATTTCT	NA	False	NA	0	True	AATAAA	-14	NA	74544419	74540931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_74541843_74542028_74542166_74542413
ENSMUST00000110013.10	chr8	+	4009	24	FSM	ENSMUSG00000031805.18	ENSMUST00000110013.10	4009	24	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_6	28.4113052926296	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAAAGATGGTTTGTG	NA	False	NA	-4	True	AATGAA	-4	NA	72128939	72141200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72132489_72133078_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134832_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683
ENSMUST00000110020.8	chr12	-	1835	13	FSM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	47.188157648103	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGGCTTTGTGGTTTG	9960	False	NA	-3	True	AAAACA	-29	NA	102390028	102360342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843
ENSMUST00000110027.2	chr2	+	2359	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	194.922420465169	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112860	144122436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUST00000110028.8	chr2	+	2308	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	188.862383761299	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112582	144122436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUST00000110029.9	chr11	-	2939	12	FSM	ENSMUSG00000020451.18	ENSMUST00000110029.9	2939	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	64.9844227997108	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAGAGTGCCAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	3306141	3294255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3306052
ENSMUST00000110030.10	chr2	-	2512	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112826	144092042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ENSMUST00000110030.10-0	chr2	-	1980	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	122	410	0	-410	multi-exon	FALSE	canonical	3	1124	junction_13	126.932773522376	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGGAGTGCTTTTGTA	NA	False	NA	-21	True	AATAAA	-15	NA	144112704	144092452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ENSMUST00000110031.4	chr13	-	3235	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTTGGTCACAGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	53083717	53064245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
ENSMUST00000110031.4-0	chr13	-	596	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	0	2639	0	0	multi-exon	FALSE	canonical	3	117	junction_1	164.004742478855	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCGGTTCCCAGTGTGG	NA	False	NA	-10	True	AATAAA	-15	NA	53083717	53066884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
ENSMUST00000110036.11	chr15	-	4417	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1677	False	NA	-4	True	AATAAA	-44	NA	73295040	73076950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ENSMUST00000110036.11-1	chr15	-	4207	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	-21	231	0	-231	multi-exon	FALSE	canonical	3	91	junction_30	29.7827373894676	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1656	False	NA	-10	True	ATTAAA	-18	NA	73295061	73077181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ENSMUST00000110039.2	chr13	-	4415	15	FSM	ENSMUSG00000021451.17	ENSMUST00000110039.2	4415	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	47.6117911137695	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTGGGCCAGCCTTTGC	NA	False	NA	-8	True	AATAAA	-16	NA	51888799	51855285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51888542
ENSMUST00000110040.9	chr13	-	4472	17	FSM	ENSMUSG00000021451.17	ENSMUST00000110040.9	4472	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	57.0268234583516	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGCCTTTGCCTTA	NA	False	NA	-4	True	AATAAA	-20	NA	51947709	51855281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_51857568_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51888542_51888607_51917287_51917357_51947532
ENSMUST00000110043.8	chr11	+	3702	5	FSM	ENSMUSG00000020453.18	ENSMUST00000110043.8	3702	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	207.771960331513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6006	False	NA	14	True	ATTAAA	-16	NA	3239992	3259083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256222_3256361_3257647
ENSMUST00000110049.8	chr11	+	3614	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_10	64.4808326386825	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3844	False	NA	14	True	ATTAAA	-30	NA	3152662	3194588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUST00000110054.8	chr8	+	973	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110054.8	973	9	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	224.605626599157	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	False	NA	22	True	AATAAA	-23	NA	71819585	71822376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUST00000110057.3	chr2	-	3977	3	FSM	ENSMUSG00000051379.13	ENSMUST00000110057.3	3977	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGTATCCTTTTTACT	NA	False	NA	1	True	AATAAA	-36	NA	140513389	140500117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_140503672_140505180_140505380_140513165
ENSMUST00000110071.3	chr8	-	1452	11	FSM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	129.467524885587	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	696	False	NA	-9	True	NA	NA	NA	71725020	71703768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUST00000110079.9	chr2	-	2258	14	FSM	ENSMUSG00000039033.12	ENSMUST00000110079.9	2258	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	20.460092487948	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGTGTGACTGCTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	139908725	139675399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ENSMUST00000110082.11	chr12	+	4115	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	0	0	0	0	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGAACTGTGTAGGT	9165	False	NA	27	True	AATAAA	-24	NA	100165693	100176073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUST00000110082.11-0	chr12	+	1518	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	94	2503	0	816	multi-exon	FALSE	canonical	3	3420	junction_5	211.830687106472	2740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGTGTTAAATGCTT	9259	False	NA	26	True	AATAAA	-15	NA	100165787	100173570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUST00000110085.11	chr13	+	4588	8	FSM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	11.2213353638031	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCCCTCTGTGATTGC	1439	False	NA	18	True	AATAAA	-25	NA	49495071	49540502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUST00000110089.9	chr2	-	3178	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	119.159389055164	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATACAATCCTTACTA	NA	False	NA	0	True	AATAAA	-20	NA	136733309	136715699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
ENSMUST00000110093.9	chr8	+	1442	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12.8646803302686	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACCCTGCCCAGCCTTGC	NA	False	NA	88	True	ATTAAA	-19	NA	71207327	71211323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
ENSMUST00000110103.2	chr8	-	1380	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	118	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	654	False	NA	-7	True	AATAAA	-17	NA	71085106	71082043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71082825_71083982_71084275_71084799
ENSMUST00000110104.10	chr12	+	3146	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713222	98754012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUST00000110104.10-0	chr12	+	2216	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	25	905	0	0	multi-exon	FALSE	canonical	3	422	junction_10	269.986630432407	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713247	98753107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUST00000110105.10	chr12	+	3514	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713247	98754012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUST00000110105.10-0	chr12	+	2609	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	0	905	0	0	multi-exon	FALSE	canonical	3	883	junction_12	209.53098667023	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713247	98753107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUST00000110115.9	chr15	-	4535	30	FSM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_28	25.7623364351316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64254768	63960389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ENSMUST00000110115.9-0	chr15	-	6056	30	FSM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	163	-1684	0	0	multi-exon	FALSE	canonical	3	31	junction_28	25.7623364351316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCTGACATCAGGCCA	NA	False	NA	-8	True	AATAAA	-20	NA	64254605	63958705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ENSMUST00000110117.2	chr12	+	3223	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATGTTGCTGAA	NA	False	NA	NA	False	TTTAAA	-4	NA	95662130	95747881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_95662753_95745280
ENSMUST00000110117.2-0	chr12	+	7331	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	0	-4108	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTTTATCTGAGT	NA	False	NA	NA	False	AGTAAA	-20	NA	95662130	95751989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_95662753_95745280
ENSMUST00000110128.5	chr13	-	1305	10	FSM	ENSMUSG00000057531.15	ENSMUST00000110128.5	1305	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	214.112004841587	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACACTGTGCAGCTGG	NA	False	NA	NA	False	AATAAA	-9	NA	45155572	45075560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_45075931_45076624_45076769_45084471_45084640_45084722_45084734_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ENSMUST00000110141.9	chr8	+	1253	8	FSM	ENSMUSG00000079033.11	ENSMUST00000110141.9	1253	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	84.1783820229398	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATCTCCTCAAAGATC	8592	False	NA	4	True	NA	NA	NA	70605430	70620137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619468_70619557_70619715
ENSMUST00000110143.8	chr8	+	1312	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110143.8	1312	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	45.467021015237	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8589	False	NA	5	True	NA	NA	NA	70605427	70620138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619047_70619263_70619349_70619468_70619557_70619715
ENSMUST00000110146.9	chr8	+	1342	9	FSM	ENSMUSG00000079033.11	ENSMUST00000110146.9	1342	9	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	49.3303595669036	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8589	False	NA	5	True	NA	NA	NA	70605427	70620138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
ENSMUST00000110163.8	chr2	-	1551	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	223.123782287371	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	4908	False	NA	-2	True	TATAAA	-20	NA	132089689	132081411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
ENSMUST00000110164.8	chr2	-	2957	3	FSM	ENSMUSG00000027341.11	ENSMUST00000110164.8	2957	3	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_2	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGTTGTTATTGAT	5023	False	NA	-2	True	TATAAA	-20	NA	132089574	132081411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132082547_132085938_132086062_132087875
ENSMUST00000110168.8	chr15	-	5212	5	FSM	ENSMUSG00000022361.15	ENSMUST00000110168.8	5212	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.7816619020833	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTGATTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	57939885	57910398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_57912182_57915619_57918479_57927450_57927577_57932714_57932826_57939552
ENSMUST00000110171.9	chr2	+	1938	3	FSM	ENSMUSG00000027338.17	ENSMUST00000110171.9	1938	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGGTGTCTGGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	131792781	131798050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131792836_131794928_131795503_131796740
ENSMUST00000110179.9	chr2	+	1320	6	FSM	ENSMUSG00000027333.19	ENSMUST00000110179.9	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	49.3128786423993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	20	True	AATAAA	-21	NA	131333862	131367092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131363978_131364140_131366662
ENSMUST00000110186.9	chr2	+	2170	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	48.183746942177	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCTTCTCTCCTCAG	NA	False	NA	20	True	AATAAA	-21	NA	131333862	131367092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
ENSMUST00000110191.10	chr13	+	4352	3	FSM	ENSMUSG00000021360.17	ENSMUST00000110191.10	4352	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	71.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGGAATAGTGGATATT	NA	False	NA	15	True	AATAAA	-20	NA	41013229	41114363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41014750_41107051_41107148_41111627
ENSMUST00000110199.3	chr2	+	3057	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	57.107111835762	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7302	False	NA	14	True	ATTAAA	-19	NA	131076024	131089945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ENSMUST00000110208.8	chr2	+	1521	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	10	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052359	131055434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131052602_131053182_131053394_131054366
ENSMUST00000110214.9	chr7	-	1638	4	FSM	ENSMUSG00000090744.8	ENSMUST00000110214.9	1638	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	110.605404730309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATCACTGTGGTGAAG	NA	False	NA	NA	False	NA	NA	NA	41223086	41195097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_41196224_41197139_41197201_41197407_41197535_41222762
ENSMUST00000110231.2	chr15	-	1499	10	FSM	ENSMUSG00000022422.14	ENSMUST00000110231.2	1499	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	97.4314573887145	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	NA	False	NA	-8	True	AATAAA	-14	NA	54953876	54939497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54946990_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ENSMUST00000110238.10	chr13	+	4585	10	FSM	ENSMUSG00000039087.18	ENSMUST00000110238.10	7437	10	0	2852	0	0	multi-exon	FALSE	canonical	3	20	junction_1	27.5053305720281	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGTGGTCATAGGCTCC	NA	False	NA	15	True	AATAAA	-15	NA	38010013	38116669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_38010321_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533
ENSMUST00000110241.8	chr8	+	2322	16	FSM	ENSMUSG00000031864.17	ENSMUST00000110241.8	2322	16	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_4	82.2904341679855	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAGTACTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	69246586	69275163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808
ENSMUST00000110251.9	chr13	-	1395	10	FSM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	51.0630208542878	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAAGCCTTAAGAAT	NA	False	NA	NA	False	AATAAA	-8	NA	35178115	35161739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
ENSMUST00000110272.9	chr12	-	4972	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	4.47014789713072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCCTTTGGGTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	84455803	84420648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ENSMUST00000110273.9	chr13	-	1325	7	FSM	ENSMUSG00000052180.16	ENSMUST00000110273.9	1325	7	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_6	71.5830908028488	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAACCGAGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	34089153	34063798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089090
ENSMUST00000110294.2	chr12	-	7156	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATACACTAAAGAGAATC	NA	False	NA	NA	False	TATAAA	-8	NA	84240789	84196051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
ENSMUST00000110294.2-0	chr12	-	4170	13	FSM	ENSMUSG00000042507.16	ENSMUST00000110294.2	7156	13	0	2986	0	195	multi-exon	FALSE	canonical	3	72	junction_9	16.3681601491025	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGCCAAGGACAGTGTT	NA	False	NA	-20	True	AATAAA	-17	NA	84240789	84199037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84240272
ENSMUST00000110298.9	chr12	-	3435	10	FSM	ENSMUSG00000021224.16	ENSMUST00000110298.9	3435	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	38.5630796372789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83923584	83840809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858080_83878695_83878771_83888991_83889133_83923441
ENSMUST00000110299.3	chr2	+	2627	13	FSM	ENSMUSG00000027401.10	ENSMUST00000110299.3	4135	13	0	1508	0	-1508	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCACCAGTTCCAACCGG	NA	False	NA	NA	False	AATAAA	-21	NA	129854268	129890811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129854330_129865608_129865783_129866264_129866505_129867177_129867297_129868604_129868734_129871544_129871723_129871820_129871957_129879392_129879497_129880282_129880529_129883676_129883986_129886422_129886581_129889607_129889742_129890172
ENSMUST00000110301.2	chr8	-	4099	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCAGTTAATATTGCACA	NA	False	NA	NA	False	ATTAAA	-14	NA	61436273	61364956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ENSMUST00000110301.2-0	chr8	-	5694	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110301.2	4099	13	-61	-1534	0	0	multi-exon	FALSE	canonical	3	96	junction_11	50.7408995672021	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436334	61363422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765_61428942_61435809
ENSMUST00000110302.8	chr8	-	3768	13	FSM	ENSMUSG00000004319.16	ENSMUST00000110302.8	3768	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	92.1844467479315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCTTTTTAATGTGAC	NA	False	NA	NA	False	ATTAAA	-41	NA	61407782	61364929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61407576
ENSMUST00000110305.3	chr15	-	4244	6	FSM	ENSMUSG00000022305.14	ENSMUST00000110305.3	4244	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	13.6733317081098	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTACTTTTTAAATCAAAG	NA	False	NA	-16	True	ATTAAA	-22	NA	39807390	39733998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39806999
ENSMUST00000110306.9	chr15	-	2110	10	FSM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	67.0043300609265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39720866	39646092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_39646506_39647964_39648111_39656622_39656831_39687561_39687705_39690259_39690402_39691370_39691528_39705318_39705509_39707253_39707434_39710004_39710164_39720494
ENSMUST00000110315.2	chr2	+	3219	10	FSM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	145.845428069888	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAATTTCTCTTGTGCTT	NA	False	NA	15	True	AATAAA	-17	NA	129041229	129053529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ENSMUST00000110316.3	chr8	-	3413	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	28.2342620537355	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGAAAAGC	NA	False	NA	NA	False	GATAAA	-19	NA	58106037	57977733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ENSMUST00000110320.9	chr2	+	4916	12	FSM	ENSMUSG00000042851.18	ENSMUST00000110320.9	4916	12	0	0	0	0	multi-exon	FALSE	non_canonical	1	6	junction_7	5.58036700117193	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGACTGGTTCTATAACAG	6932	False	NA	4	True	AATAAA	-18	NA	128809321	128860483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128809757_128833010_128833192_128835078_128835202_128839524_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041
ENSMUST00000110325.8	chr2	+	4807	19	FSM	ENSMUSG00000014353.16	ENSMUST00000110325.8	4807	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	41.8620603741076	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	False	NA	9	True	AATAAA	-20	NA	128660037	128696181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128681067_128681140_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ENSMUST00000110329.8	chr15	-	4217	13	FSM	ENSMUSG00000037458.16	ENSMUST00000110329.8	4217	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	173.208669112015	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTACTTTGATGGCTT	NA	False	NA	-8	True	GATAAA	-16	NA	38519507	38488481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUST00000110336.4	chr15	-	9242	59	FSM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	176.45579964147	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	NA	False	NA	-5	True	AATAAA	-31	NA	38079098	37968102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ENSMUST00000110340.9	chr12	-	668	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	77.5127229699888	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	998	False	NA	-46	True	AATAAA	-19	NA	81531884	81405799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
ENSMUST00000110341.9	chr2	+	5036	4	FSM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	11.2644968324772	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTGTTCGATGTGTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	127967958	128004467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150
ENSMUST00000110346.9	chr8	-	2267	10	FSM	ENSMUSG00000031561.17	ENSMUST00000110346.9	2267	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_9	21.6800528449085	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATTTTGGTCAGCTG	NA	False	NA	NA	False	CATAAA	-39	NA	49008348	48788227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008187
ENSMUST00000110347.9	chr12	+	3496	13	FSM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	48.9003379901975	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81073581	81233188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ENSMUST00000110351.8	chr12	+	1498	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110351.8	1498	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_7	580.121838012305	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992305	80997277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUST00000110352.10	chr12	+	1491	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110352.10	1491	8	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	564.545762863691	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992305	80997277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUST00000110356.3	chr12	+	1568	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_1	476.276244656911	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992358	80997277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUST00000110357.2	chr2	-	2296	20	FSM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	13.7437973922422	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGTTATATCTAAATT	2791	False	NA	0	True	AATAAA	-16	NA	127630817	127582655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ENSMUST00000110361.8	chr15	-	2285	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110361.8	2285	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	1591.90916826306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAAAAAACCGCT	NA	False	NA	NA	False	NA	NA	NA	36794775	36771812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36794388
ENSMUST00000110361.8-0	chr15	-	2817	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110361.8	2285	6	267	-799	267	0	multi-exon	FALSE	canonical	3	223	junction_5	1591.90916826306	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCTCAGTGGTGA	13	True	NA	-39	True	NA	NA	NA	36794508	36771013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36794388
ENSMUST00000110362.4	chr15	-	2122	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	0	0	0	0	multi-exon	FALSE	canonical	3	2654	junction_5	629.488808478753	2236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAACTACTTTTCTCT	440	False	NA	-12	True	NA	NA	NA	36794081	36771947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ENSMUST00000110368.9	chr2	-	2981	6	FSM	ENSMUSG00000034800.16	ENSMUST00000110368.9	2981	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	12.1983605455815	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAAGTGTCTCTATTCA	NA	False	NA	-19	True	NA	NA	NA	127426589	127417452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127419865_127420523_127420638_127422816_127422944_127423395_127423467_127423778_127423996_127426549
ENSMUST00000110372.9	chr8	+	3429	21	FSM	ENSMUSG00000018796.14	ENSMUST00000110372.9	3429	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	90.7041344151412	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTACCTGATTTATGTG	9507	False	NA	NA	False	ATTAAA	-32	NA	46944002	46988618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUST00000110375.9	chr2	+	3116	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_5	27.592515992122	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112148	127140852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ENSMUST00000110378.9	chr8	-	3445	19	FSM	ENSMUSG00000038291.17	ENSMUST00000110378.9	3445	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	6.48288344625891	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTCAAAGGTATTATATG	NA	False	NA	NA	False	AATAAA	-19	NA	46605196	46486297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ENSMUST00000110382.9	chr13	-	963	7	FSM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	0	0	0	0	multi-exon	FALSE	canonical	3	1483	junction_6	81.6382603658086	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGTGGAGAATTAAGTGT	NA	False	NA	-8	True	AATAAA	-26	NA	24945906	24935827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ENSMUST00000110386.2	chr2	-	3671	2	FSM	ENSMUSG00000074825.5	ENSMUST00000110386.2	1898	2	-136	-1637	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAACTGGAATCTGTTC	NA	False	NA	-11	True	AATAAA	-22	NA	126985362	126980691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126984135_126985134
ENSMUST00000110387.4	chr2	-	2695	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	0	0	0	0	multi-exon	TRUE	canonical	3	394	junction_9	30.9044738701424	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCAGTATTAGCGTCACA	NA	False	NA	13	True	AATAAA	-34	NA	126975874	126945728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ENSMUST00000110388.10	chr12	+	3300	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	13.5066558431803	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGTGCGGCCT	NA	False	NA	21	True	AATAAA	-24	NA	78273426	78731541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ENSMUST00000110395.11	chr12	-	1942	5	FSM	ENSMUSG00000059436.14	ENSMUST00000110395.11	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	22.1697992773954	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTAGTGTCTTCTTAAC	NA	False	NA	0	True	AATAAA	-20	NA	77008959	76984042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008036_77008064_77008763
ENSMUST00000110398.8	chr13	-	4520	38	FSM	ENSMUSG00000021338.18	ENSMUST00000110398.8	4520	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.9752793067669	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGAGTTGTTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	24464699	24197043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_24197444_24204029_24204055_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ENSMUST00000110424.9	chr2	-	2613	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	121.804595048791	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517422	126470832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUST00000110437.4	chr2	+	1276	4	FSM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	13.6381816969859	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCCTTACCTTTCGACT	9679	False	NA	28	True	ATTAAA	-26	NA	125996460	126007199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_125996781_126000329_126000474_126001689_126001949_126006646
ENSMUST00000110452.2	chr13	+	463	1	FSM	ENSMUSG00000069300.4	ENSMUST00000110452.2	463	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCATGTCTACTGCTAAC	NA	False	NA	NA	False	TTTAAA	-8	NA	22227383	22227846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_22227400_22227800
ENSMUST00000110455.4	chr13	+	476	1	FSM	ENSMUSG00000062727.5	ENSMUST00000110455.4	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTCACCTTCGAGTACG	NA	False	NA	39	True	ACTAAA	-25	NA	22220039	22220515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_22220000_22220500
ENSMUST00000110456.3	chr17	+	891	4	FSM	ENSMUSG00000025731.17	ENSMUST00000110456.3	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	203.922098415601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGCTTGCTGGGAAT	7158	False	NA	30	True	AATAAA	-31	NA	26094437	26096134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26094701_26095193_26095254_26095468_26095537_26095634
ENSMUST00000110457.8	chr15	+	8125	41	FSM	ENSMUSG00000022272.18	ENSMUST00000110457.8	8125	41	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	332.593497192895	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	37	False	NA	16	True	AATAAA	-17	NA	25622610	25813759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725157_25725172_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ENSMUST00000110463.8	chr2	-	3392	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_9	189.484534695813	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTGTGTGCATGTGA	NA	False	NA	-4	True	AATAAA	-22	NA	125701059	125672223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUST00000110485.3	chr13	-	4366	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	4.81663783151692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCATTATTGAGGATAGT	NA	False	NA	NA	False	AATAAA	-14	NA	21637900	21626349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
ENSMUST00000110492.2	chr8	+	4780	6	FSM	ENSMUSG00000050271.13	ENSMUST00000110492.2	4780	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3.13687742827162	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTATTGCGT	NA	False	NA	10	True	AATAAA	-16	NA	36561981	36614941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_36562143_36566723_36567142_36569709_36571506_36596157_36596316_36606505_36607267_36613455
ENSMUST00000110504.2	chr15	-	675	5	FSM	ENSMUSG00000022205.16	ENSMUST00000110504.2	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3499.76144722751	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGGATTGCTTTGTG	NA	False	NA	13	True	ATTAAA	-32	NA	11997069	11984126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996956
ENSMUST00000110505.8	chr5	-	1720	4	FSM	ENSMUSG00000066551.13	ENSMUST00000110505.8	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	7993	junction_1	258.478023996023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	8504	False	NA	NA	False	AGTAAA	-18	NA	148988110	148985037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397
ENSMUST00000110527.9	chr8	+	2327	4	FSM	ENSMUSG00000046152.17	ENSMUST00000110527.9	2327	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.3964487013015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCAAGAAATGTATT	NA	False	NA	2	True	AATAAA	-15	NA	31677370	31751503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31749927
ENSMUST00000110531.9	chr2	-	1557	6	FSM	ENSMUSG00000033256.15	ENSMUST00000110531.9	1557	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	30.854497241083	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCCGAGCATCCACTCG	NA	False	NA	-11	True	TATAAA	-38	NA	122199399	122179373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122199127
ENSMUST00000110534.8	chr13	+	5864	24	FSM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_17	12.735494361632	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGATTTTGTTTGTAGA	1436	False	NA	4	True	AATAAA	-18	NA	14238376	14373947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ENSMUST00000110551.4	chr2	+	2352	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	10.5763592507063	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTATGTGGTTTGTGCCT	NA	False	NA	16	True	AATAAA	-19	NA	122065229	122095821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUST00000110557.5	chr5	+	1137	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	26.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	False	NA	16	True	AATAAA	-17	NA	147014155	147048171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147014504_147038038_147038114_147047457
ENSMUST00000110557.5-0	chr5	+	919	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	218	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	26.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCCTCTTTTGGGTGT	NA	False	NA	16	True	AATAAA	-17	NA	147014373	147048171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147014504_147038038_147038114_147047457
ENSMUST00000110564.8	chr5	-	1731	5	FSM	ENSMUSG00000016510.12	ENSMUST00000110564.8	1257	5	-36	-438	0	-409	multi-exon	FALSE	canonical	3	9	junction_4	53.0023584380922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900595	146891738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900521
ENSMUST00000110566.2	chr5	-	1560	4	FSM	ENSMUSG00000016510.12	ENSMUST00000110566.2	1134	4	12	-438	0	-409	multi-exon	FALSE	canonical	3	88	junction_3	16.996731711976	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900595	146891738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900532
ENSMUST00000110570.8	chr12	-	4498	32	FSM	ENSMUSG00000034761.16	ENSMUST00000110570.8	4498	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	34.9651231015531	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTTCTTTAAAGTGC	NA	False	NA	NA	False	AATAAA	-24	NA	69939974	69850523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69867713_69867717_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUST00000110578.8	chr2	+	3386	13	FSM	ENSMUSG00000033411.17	ENSMUST00000110578.8	3386	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	105.582774268449	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATAATCATGGCAG	NA	False	NA	NA	False	NA	NA	NA	121786891	121842869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUST00000110582.4	chr9	-	3223	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTCCTTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	13245834	13242611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_13242600_13245800
ENSMUST00000110586.10	chr2	+	3734	9	FSM	ENSMUSG00000060227.16	ENSMUST00000110586.10	4032	9	0	298	0	0	multi-exon	FALSE	canonical	3	90	junction_8	46.1246612453685	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACAGTTTTGATTATAT	NA	False	NA	8	True	AATAAA	-17	NA	121697450	121766388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958
ENSMUST00000110592.2	chr2	-	2222	14	FSM	ENSMUSG00000027238.18	ENSMUST00000110592.2	2222	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	7.44049371651923	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATGATTGCAGTAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	121637473	121378787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138_121422244_121637210
ENSMUST00000110609.8	chr8	-	2300	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110609.8	2300	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_15	868.905733283728	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGCTTGTATGGTACTTG	NA	False	NA	-22	True	AATAAA	-9	NA	26330485	26306913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330396
ENSMUST00000110610.8	chr8	-	2337	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	0	0	0	0	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTACTTGGCTTCACTGG	NA	False	NA	-12	True	AATAAA	-19	NA	26337722	26306903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ENSMUST00000110610.8-0	chr8	-	1891	16	FSM	ENSMUSG00000031575.19	ENSMUST00000110610.8	2337	16	0	446	0	-336	multi-exon	FALSE	canonical	3	3119	junction_12	186.058007680998	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337722	26307349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
ENSMUST00000110617.2	chr15	+	10469	53	FSM	ENSMUSG00000039801.8	ENSMUST00000110617.2	10469	53	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_2	13.020182330866	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGCCCACAGTCTGT	NA	False	NA	8	True	AATAAA	-15	NA	8198589	8300642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ENSMUST00000110619.2	chr12	-	1276	1	FSM	ENSMUSG00000049751.7	ENSMUST00000110619.2	1276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTGTTTTGATT	NA	False	NA	-5	True	AATAAA	-17	NA	69230787	69229511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69229500_69230800
ENSMUST00000110620.2	chr12	-	757	2	FSM	ENSMUSG00000049751.7	ENSMUST00000110620.2	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTTGATTCTCAGTA	NA	False	NA	2	True	AATAAA	-24	NA	69230760	69229504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69229940_69230438
ENSMUST00000110621.3	chr12	+	1500	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.6276108929747	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATGTCTCAGCAGTTA	NA	False	NA	9	True	ATTAAA	-23	NA	69215587	69225783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
ENSMUST00000110626.8	chr2	-	5171	30	FSM	ENSMUSG00000033526.17	ENSMUST00000110626.8	5171	30	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	18.3018682892629	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGATGCTGTAATAGAG	NA	False	NA	NA	False	GGGGCT	-9	NA	121181466	121141373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397
ENSMUST00000110633.8	chr13	-	1857	13	FSM	ENSMUSG00000021156.18	ENSMUST00000110633.8	1857	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	38.3741630382851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCGCCACCCTCACAC	NA	False	NA	NA	False	NA	NA	NA	9770964	9736897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808
ENSMUST00000110634.8	chr13	-	3824	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110634.8	3824	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_14	31.2871004259139	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGAGATTGTGGC	NA	False	NA	NA	False	NA	NA	NA	9814992	9735130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ENSMUST00000110636.9	chr13	-	4117	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_14	35.3204716033877	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCAGTAAGCTGCTT	NA	False	NA	2	True	AATAAA	-22	NA	9815350	9734868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ENSMUST00000110637.8	chr13	-	3770	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	32.3144681539246	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814459	9734871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ENSMUST00000110638.8	chr13	-	4003	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110638.8	4003	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	41.8502543239853	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814524	9734871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ENSMUST00000110647.8	chr2	-	6058	27	FSM	ENSMUSG00000043909.17	ENSMUST00000110647.8	9405	27	-66	3413	0	0	multi-exon	FALSE	canonical	3	11	junction_8	35.6224656526131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8072	False	NA	-5	True	AATAAA	-26	NA	121101888	121028731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ENSMUST00000110648.8	chr2	-	9621	28	FSM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_12	23.0142199734784	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTTGTTCTAACGTG	8072	False	NA	NA	False	NA	NA	NA	121101888	121025318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ENSMUST00000110648.8-0	chr2	-	6208	28	FSM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	0	3413	0	0	multi-exon	FALSE	canonical	3	115	junction_12	23.0142199734784	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8072	False	NA	-5	True	AATAAA	-26	NA	121101888	121028731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ENSMUST00000110658.8	chr2	+	4250	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001648	121029251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUST00000110658.8-0	chr2	+	3103	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	41	1106	0	615	multi-exon	FALSE	canonical	3	119	junction_12	41.5047418810901	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATTTAGCTATTGTCG	NA	False	NA	24	True	NA	NA	NA	121001689	121028145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUST00000110663.9	chr15	+	2754	14	FSM	ENSMUSG00000022150.17	ENSMUST00000110663.9	2754	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	3.86610211480894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGGTGATCTCTCCC	8292	False	NA	NA	False	AATAAA	-13	NA	6416256	6469109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUST00000110686.3	chr2	+	2417	13	FSM	ENSMUSG00000054484.15	ENSMUST00000110686.3	2417	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.91843931516958	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTGGAGAGATCAGTGG	NA	False	NA	NA	False	AATAAA	-25	NA	120808013	120838125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ENSMUST00000110687.8	chr12	-	7874	41	FSM	ENSMUSG00000021027.18	ENSMUST00000110687.8	7874	41	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	26.146892740821	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAACAAAATAAAAAT	9947	False	NA	-40	True	AAAAAG	-15	NA	55867952	55649713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55651057_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ENSMUST00000110690.9	chr15	+	3527	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_7	29.8008362927955	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGTGTGTGTCCTCTTA	NA	False	NA	16	True	AATAAA	-20	NA	4055864	4184826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUST00000110700.2	chr2	-	5996	28	FSM	ENSMUSG00000027284.17	ENSMUST00000110700.2	5996	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_27	22.3478547470889	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACTTTGCTTGAATAT	6114	False	NA	NA	False	NA	NA	NA	120561999	120547002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561669_120561884
ENSMUST00000110708.4	chr12	+	2147	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	266	1233	0	-1233	multi-exon	FALSE	canonical	3	704	junction_7	105.372650889856	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	2620	False	NA	NA	False	AATAAA	-20	NA	55202154	55235125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUST00000110711.9	chr2	+	2723	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAGACCAGTAATGCCC	NA	False	NA	10	True	NA	NA	NA	120398151	120431736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ENSMUST00000110711.9-0	chr2	+	2055	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	0	668	0	-668	multi-exon	FALSE	canonical	3	373	junction_4	7.72221814385119	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAAGCTGTATTAGCT	NA	False	NA	22	True	AATAAA	-27	NA	120398151	120431068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ENSMUST00000110725.2	chr12	+	5197	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	60.5276796185018	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAAATACATG	NA	False	NA	NA	False	NA	NA	NA	52562859	52614635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUST00000110731.4	chr5	+	1829	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_2	10.3531396204243	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTATGGTCTTTTCTAT	NA	False	NA	NA	False	AATAAA	-15	NA	143389592	143407656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ENSMUST00000110733.9	chr5	+	3825	22	FSM	ENSMUSG00000010825.18	ENSMUST00000110733.9	3825	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.4630753805464	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGCCACCAAGCATCTT	NA	False	NA	NA	False	NA	NA	NA	143343092	143377223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143343702_143348306_143348462_143358748_143358998_143359185_143359272_143360154_143360225_143361006_143361102_143361304_143361489_143363243_143363399_143365006_143365148_143365854_143365953_143366140_143366259_143367337_143367694_143368268_143368686_143371761_143371850_143372475_143372554_143373072_143373270_143373576_143373733_143373863_143373951_143374403_143374534_143374621_143374741_143376795_143376961_143377151
ENSMUST00000110778.2	chr5	+	4143	12	FSM	ENSMUSG00000029578.16	ENSMUST00000110778.2	1959	12	-2	-2182	0	-919	multi-exon	FALSE	canonical	2	44	junction_11	110.780253036405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTCCCAGAGTCAAGTG	NA	False	NA	11	True	AATAAA	-12	NA	142615345	142655424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142651947_142652614
ENSMUST00000110784.8	chr5	-	3106	14	FSM	ENSMUSG00000029576.18	ENSMUST00000110784.8	3106	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	14.8849632239221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAACTATCTTTTGTA	6395	False	NA	-33	True	TTTAAA	-23	NA	142495414	142470621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142495262
ENSMUST00000110798.5	chr1	+	1231	1	FSM	ENSMUSG00000079139.5	ENSMUST00000110798.5	1231	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTACCAAATGAGCA	4161	False	NA	NA	False	NA	NA	NA	135159732	135160963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135159700_135161000
ENSMUST00000110800.9	chr8	+	5336	28	FSM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	7.20558387346064	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAAGTTGCTTTTTTTCC	NA	False	NA	NA	False	AATAAA	-26	NA	14961737	15051085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ENSMUST00000110802.8	chr2	-	1308	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	88.8453712919249	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCCTTTTTCTGCTG	NA	False	NA	-1	True	AATAAA	-21	NA	119493302	119485926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
ENSMUST00000110805.3	chr2	-	1778	5	FSM	ENSMUSG00000072980.4	ENSMUST00000110805.3	1778	5	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	27.7758888246623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGAATT	7480	False	NA	NA	False	NA	NA	NA	119448950	119439992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334
ENSMUST00000110813.5	chr8	-	1557	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	39.1591624016653	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATATTTGTGATAAGATT	NA	False	NA	-6	True	AATAAA	-18	NA	14140301	14077560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
ENSMUST00000110816.8	chr2	+	1913	11	FSM	ENSMUSG00000027315.14	ENSMUST00000110816.8	1913	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	81.6752104374393	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGACCTGCTTATCCAAG	NA	False	NA	NA	False	NA	NA	NA	119067957	119079676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119068028_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ENSMUST00000110817.3	chr2	+	2323	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_4	16.649620912898	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCTCCCACCCCCAC	NA	False	NA	26	True	AATAAA	-14	NA	119068033	119080008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ENSMUST00000110825.2	chr5	+	599	3	FSM	ENSMUSG00000036639.13	ENSMUST00000110825.2	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	33.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGGGCGTCAGATC	NA	False	NA	NA	False	NA	NA	NA	140318178	140321451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140318229_140320209_140320375_140321067
ENSMUST00000110826.8	chr5	+	606	4	FSM	ENSMUSG00000036639.13	ENSMUST00000110826.8	606	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	28.5696031162882	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCAAGCTGTCGGACCAAG	NA	False	NA	-80	True	AATACA	-40	NA	140318149	140323563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140318229_140320209_140320375_140321067_140321214_140323347
ENSMUST00000110828.2	chr2	+	2849	7	FSM	ENSMUSG00000027323.11	ENSMUST00000110828.2	2849	7	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_5	99.374152686814	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAAATAAAGTAAGTTA	NA	False	NA	NA	False	NA	NA	NA	118943294	118964080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984
ENSMUST00000110831.4	chr1	+	2257	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCCTGAAATCATTTG	961	False	NA	NA	False	AATAAA	-17	NA	192855887	192858608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_192856089_192856552
ENSMUST00000110831.4-0	chr1	+	3643	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	6	-1392	0	-140	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGAGGACATGCCTCTC	967	False	NA	11	True	NA	NA	NA	192855893	192860000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_192856089_192856552
ENSMUST00000110839.10	chr8	-	2937	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110839.10	2937	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17.0105849399719	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13338126	13305962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13307977_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUST00000110840.8	chr8	-	2853	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	12.0701077045733	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	False	NA	-2	True	AATAAA	-15	NA	13338125	13305962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUST00000110851.8	chr5	-	3121	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	12.5532200384337	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATTCTAGACAGTTT	8709	False	NA	-11	True	AATAAA	-19	NA	139470272	139456970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
ENSMUST00000110853.8	chr2	+	3677	10	FSM	ENSMUSG00000074923.11	ENSMUST00000110853.8	3677	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.56347191994114	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTGGGTTTTTCATTC	NA	False	NA	NA	False	ATTAAA	-12	NA	118507709	118528499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118507783_118508203_118508310_118519277_118519487_118520214_118520872_118523707_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118525687_118525823_118526887
ENSMUST00000110855.8	chr1	+	7233	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGCCTTGTTCTTAA	NA	False	NA	9	True	AATAAA	-18	NA	191449945	191516367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ENSMUST00000110855.8-0	chr1	+	5747	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	193	1293	0	-1293	multi-exon	FALSE	canonical	3	33	junction_1	23.0757404197215	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAATGCTTTTAATTC	NA	False	NA	NA	False	AATAAA	-19	NA	191450138	191515074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ENSMUST00000110857.5	chr12	-	2544	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACAATTTATATTTATT	NA	False	NA	NA	False	AGTAAA	-18	NA	31401452	31381275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ENSMUST00000110857.5-0	chr12	-	2218	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	39	287	0	-287	multi-exon	FALSE	canonical	3	710	junction_4	70.0417457938204	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACTGGTTATTCTGAG	NA	False	NA	-12	True	AATAAA	-16	NA	31401413	31381562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ENSMUST00000110865.2	chr5	-	2557	11	FSM	ENSMUSG00000056413.17	ENSMUST00000110865.2	2557	11	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_10	23.6296424010183	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	4958	False	NA	-5	True	AATAAA	-20	NA	139311377	139257630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ENSMUST00000110870.8	chr2	+	5116	34	FSM	ENSMUSG00000005102.14	ENSMUST00000110870.8	5116	34	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_19	14.3175324528073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTTTTCCATTTGCA	NA	False	NA	9	True	AATAAA	-15	NA	118242826	118305715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ENSMUST00000110883.9	chr5	+	3714	20	FSM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	213.143404315789	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186397	139235550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUST00000110884.9	chr5	+	3955	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_8	208.642464528521	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCGATTTCAAGTGAT	NA	False	NA	-12	True	AATAAA	-21	NA	139186414	139235550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUST00000110894.9	chr14	+	1169	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGTGTGTGAACTCA	838	False	NA	NA	False	NA	NA	NA	76082532	76085855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUST00000110894.9-1	chr14	+	842	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	209	118	0	0	multi-exon	FALSE	canonical	3	5160	junction_2	168.161113221815	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGAACTCTTTGCTGT	1047	False	NA	4	True	AATAAA	-15	NA	76082741	76085737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUST00000110897.8	chr5	-	1287	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	122.688969892706	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAACAAAAAAAACAA	NA	False	NA	NA	False	AAAACA	-43	NA	138981842	138962696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
ENSMUST00000110899.7	chr1	+	3673	9	FSM	ENSMUSG00000026634.17	ENSMUST00000110899.7	3673	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	60.2136820000239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGGACAGAGAAGTT	NA	False	NA	16	True	AATAAA	-18	NA	190660688	190679159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_190660915_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUST00000110905.9	chr5	-	3775	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	0	974	0	358	multi-exon	FALSE	canonical	3	54	junction_4	14.2632394637403	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATTATTTTAAGTTG	1731	False	NA	NA	False	AATAAA	-7	NA	138618023	138602887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ENSMUST00000110906.9	chr2	-	3229	13	FSM	ENSMUSG00000027210.21	ENSMUST00000110906.9	3229	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.4825309634758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGTGACGTTATGTTA	NA	False	NA	-77	True	ATTAAA	-12	NA	115895202	115693625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_115694995_115697290_115697386_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
ENSMUST00000110908.9	chr2	-	3697	13	FSM	ENSMUSG00000027210.21	ENSMUST00000110908.9	3697	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.8535710713571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGTGTTTTTTAATG	NA	False	NA	4	True	AATAAA	-25	NA	115896320	115693544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ENSMUST00000110917.2	chr12	-	1384	12	FSM	ENSMUSG00000020636.15	ENSMUST00000110917.2	1384	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	2.63165724111457	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTTGATCTCCTGTTG	3419	False	NA	NA	False	AATAAA	-17	NA	28632514	28603753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_28604047_28605262_28605388_28607340_28607450_28609237_28609312_28609868_28610025_28613369_28613503_28614233_28614314_28615395_28615525_28618000_28618089_28620608_28620660_28623175_28623271_28632463
ENSMUST00000110918.3	chr2	+	2735	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_9	22.3015694514983	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACCCTTCTACCTGGA	NA	False	NA	7	True	AATAAA	-17	NA	115412213	115609249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ENSMUST00000110934.9	chr5	+	1855	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	26.1350339582714	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAGTGTAATACATAATA	5598	False	NA	NA	False	AAAACA	-12	NA	138185746	138192180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ENSMUST00000110936.8	chr5	-	2308	15	FSM	ENSMUSG00000036980.14	ENSMUST00000110936.8	2308	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	183.295568157341	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	9932	False	NA	-4	True	AATAAA	-18	NA	138185713	138176878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185652
ENSMUST00000110942.11	chr12	+	2351	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	25.3874148611735	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAGGGAAGCTAAGATAA	NA	False	NA	NA	False	NA	NA	NA	24881621	25009873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ENSMUST00000110943.9	chr1	+	4702	8	FSM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	24.9038969166003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTTGTTGGTGTGTTTCT	NA	False	NA	NA	False	AATAAA	-26	NA	186947718	187083901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
ENSMUST00000110948.8	chr2	-	4878	11	FSM	ENSMUSG00000041219.15	ENSMUST00000110948.8	4878	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	114.655832821536	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTGTCTGCGTGTTGTA	6012	False	NA	-4	True	ATTAAA	-17	NA	113679006	113661836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_113664808_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUST00000110949.9	chr2	-	4458	14	FSM	ENSMUSG00000041219.15	ENSMUST00000110949.9	4458	14	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	137.812367081877	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	6058	False	NA	-7	True	ATTAAA	-14	NA	113678960	113661839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_113662643_113663014_113663107_113663244_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUST00000110951.8	chr5	+	1098	10	FSM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	1439.16262518466	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGCCCTTCCAGTGGC	NA	False	NA	11	True	AATAAA	-12	NA	138159361	138162240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138159453_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUST00000110960.9	chr5	+	2204	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	50.6776303927307	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATTTTATTGGGT	NA	False	NA	55	True	TATAAA	-6	NA	138115198	138132527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
ENSMUST00000110961.9	chr5	+	2310	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	38.7774096607806	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATTTTATTGGGT	NA	False	NA	55	True	TATAAA	-6	NA	138115177	138132527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ENSMUST00000110962.2	chr5	+	4843	3	FSM	ENSMUSG00000029729.13	ENSMUST00000110962.2	4843	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTATGCACTCATTGCT	1612	False	NA	NA	False	AATAAA	-17	NA	138090901	138102753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138091695_138092253_138092402_138098851
ENSMUST00000110965.2	chr1	+	2049	8	FSM	ENSMUSG00000026617.17	ENSMUST00000110965.2	1046	8	-7	-996	0	0	multi-exon	FALSE	canonical	3	19	junction_1	90.255872102482	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064369	185089974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_185064461_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUST00000110971.3	chr12	-	1471	1	FSM	ENSMUSG00000091071.3	ENSMUST00000110971.3	1471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTAGACTA	NA	False	NA	NA	False	AAGAAA	-25	NA	20865728	20864257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_20864300_20865700
ENSMUST00000110998.9	chr8	+	3497	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_7	24.9617707705203	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	False	NA	19	True	AATAAA	-20	NA	4288739	4297896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ENSMUST00000111007.8	chr5	-	1318	5	FSM	ENSMUSG00000037221.14	ENSMUST00000111007.8	1318	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_3	14.7054411698527	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAACGTAGGATGCTTA	9968	False	NA	-10	True	ATTAAA	-21	NA	137598970	137594906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532
ENSMUST00000111018.2	chr1	+	1267	2	FSM	ENSMUSG00000026511.8	ENSMUST00000111018.2	823	2	44	-488	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTATAGGTTTCTTT	NA	False	NA	26	True	AATAAA	-34	NA	181952345	181959972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_181952541_181958900
ENSMUST00000111020.8	chr5	-	1470	9	FSM	ENSMUSG00000029713.16	ENSMUST00000111020.8	1470	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	239.131240117221	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCATAAAGGAACCACTT	1745	False	NA	20	True	NA	NA	NA	137531559	137526419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137531400
ENSMUST00000111027.8	chr5	-	1610	10	FSM	ENSMUSG00000029713.16	ENSMUST00000111027.8	1610	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	225.5974783153	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATAAAGGAACCACTTC	3284	False	NA	21	True	NA	NA	NA	137530020	137526418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137529868
ENSMUST00000111035.2	chr5	-	988	1	FSM	ENSMUSG00000029715.6	ENSMUST00000111035.2	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTCGAATGGCCTCT	1732	False	NA	-32	True	AATAAA	-20	NA	137500687	137499699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137499700_137500700
ENSMUST00000111055.9	chr5	+	4296	17	FSM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	71.8852166651809	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGAGGGTGACTGGGA	NA	False	NA	19	True	AATAAA	-22	NA	137348433	137372782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ENSMUST00000111057.2	chr1	+	562	3	FSM	ENSMUSG00000062169.14	ENSMUST00000111057.2	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	2115	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTTTACCACATAAAG	NA	False	NA	-29	True	NA	NA	NA	180983284	180993914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180983537_180989639_180989781_180993745
ENSMUST00000111063.8	chr2	+	2848	7	FSM	ENSMUSG00000016386.16	ENSMUST00000111063.8	2848	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4.49691252107735	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGTGCTGCGTGGTTGGGC	NA	False	NA	NA	False	AATAAA	-18	NA	106523613	106698701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_106524167_106529632_106529881_106575044_106575227_106613977_106614204_106691832_106691949_106694999_106695114_106697292
ENSMUST00000111067.10	chr12	-	5433	21	FSM	ENSMUSG00000020593.17	ENSMUST00000111067.10	5433	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	36.2842596727562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	NA	False	NA	-22	True	AATAAA	-27	NA	16660967	16585954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16660777
ENSMUST00000111080.8	chr5	-	1353	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_4	57.0586321252096	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGGCTTTGTTGG	NA	False	NA	1	True	AATAAA	-25	NA	137074989	137063846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
ENSMUST00000111094.8	chr5	+	948	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	181.92443486239	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	4051	False	NA	18	True	AATAAA	-19	NA	136982128	136995086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUST00000111097.8	chr5	+	601	4	FSM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	234.963827003222	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCTTAGCCCCTGC	4182	False	NA	-65	True	NA	NA	NA	136982259	136995003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136982445_136993946_136994024_136994418_136994525_136994770
ENSMUST00000111097.8-0	chr5	+	817	4	FSM	ENSMUSG00000019054.14	ENSMUST00000111097.8	601	4	-131	-85	0	0	multi-exon	FALSE	canonical	3	58	junction_1	234.963827003222	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGTGTGAGCGAGCA	4051	False	NA	20	True	AATAAA	-21	NA	136982128	136995088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136982445_136993946_136994024_136994418_136994525_136994770
ENSMUST00000111108.10	chr1	-	1997	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	6.79411510058521	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGTTTGGCCCCTTT	NA	False	NA	2	True	AATAAA	-19	NA	180083865	180054568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
ENSMUST00000111110.3	chr2	-	817	8	FSM	ENSMUSG00000027170.13	ENSMUST00000111110.3	817	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	800.081398920109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTTCTAAGTAAAACA	2677	False	NA	-49	True	NA	NA	NA	104847388	104830033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104847290
ENSMUST00000111113.3	chr12	+	4312	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	11.1856972283898	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAGTAATGCTGTAGT	NA	False	NA	7	True	AATAAA	-14	NA	9024046	9078846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ENSMUST00000111121.2	chr14	-	3365	31	FSM	ENSMUSG00000059456.14	ENSMUST00000111121.2	3365	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.70413529661817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGGGTGACATAGTTCA	NA	False	NA	NA	False	NA	NA	NA	66518431	66391292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394545_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891_66424972_66427022_66427111_66427504_66427684_66450760_66451002_66518331
ENSMUST00000111122.9	chr12	+	6311	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	34.6128227684481	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCCTCTATATCTCTGTC	NA	False	NA	18	True	AATAAA	-30	NA	8724223	8802561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUST00000111124.8	chr2	-	4125	16	FSM	ENSMUSG00000027177.15	ENSMUST00000111124.8	4125	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_15	13.0833227176178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTAGCCATGGCACAA	NA	False	NA	NA	False	AATAAA	-16	NA	104324035	104260125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265063_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104323565
ENSMUST00000111132.8	chr2	+	436	4	FSM	ENSMUSG00000068686.13	ENSMUST00000111132.8	436	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	23.6690139681023	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	103900193	103921532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_103900265_103909202_103909282_103911341_103911444_103921348
ENSMUST00000111134.2	chr1	-	1229	6	FSM	ENSMUSG00000055067.16	ENSMUST00000111134.2	1229	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	165.062412438447	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTAGATCAAGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	179345606	179222788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_179223397_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ENSMUST00000111140.3	chr2	+	1706	3	FSM	ENSMUSG00000032698.16	ENSMUST00000111140.3	1706	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGCTGTTCTTGATGT	4575	False	NA	NA	False	AATAAA	-16	NA	103800567	103812219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_103801058_103806349_103806566_103811219
ENSMUST00000111145.10	chr5	+	2493	10	FSM	ENSMUSG00000004947.16	ENSMUST00000111145.10	2493	10	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_5	18.5279235376575	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCATCTGTTGGGAAG	8470	False	NA	8	True	AATAAA	-13	NA	136023664	136061718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUST00000111147.8	chr2	-	4069	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	0	0	0	0	multi-exon	FALSE	canonical	3	1559	junction_1	126.714184008996	2594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627449	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUST00000111159.2	chr1	-	4906	14	FSM	ENSMUSG00000019699.17	ENSMUST00000111159.2	4906	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	3.68910117177901	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTCTGTTTGTTGTTG	NA	False	NA	-8	True	AATAAA	-18	NA	177085769	176849681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
ENSMUST00000111159.2-0	chr1	-	4781	14	FSM	ENSMUSG00000019699.17	ENSMUST00000111159.2	4906	14	-199	324	-199	-324	multi-exon	FALSE	canonical	3	17	junction_13	3.68910117177901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTCATCGAGTCACCT	NA	False	NA	-8	True	AATAAA	-14	NA	177085968	176850005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241_177076448_177085711
ENSMUST00000111160.9	chr1	-	4735	13	FSM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	3.523729085311	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTCTGTTTGTTGTTGT	NA	False	NA	-7	True	AATAAA	-19	NA	177076333	176849680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177076241
ENSMUST00000111171.6	chr5	-	5580	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_6	20.4224481610038	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAGTTTGCCCTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	135423400	135404994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ENSMUST00000111178.2	chr12	-	6547	23	FSM	ENSMUSG00000020658.11	ENSMUST00000111178.2	6547	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	2.26224857056896	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTCTATTTGAATTCT	NA	False	NA	1	True	AATAAA	-20	NA	4088915	4012553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4016548_4017102_4017153_4018526_4018634_4019564_4019614_4020975_4021068_4021765_4021894_4023607_4023676_4025335_4025468_4026714_4026877_4027118_4027195_4027912_4028086_4030141_4030194_4030450_4030563_4031653_4031816_4031969_4032106_4032854_4032934_4033383_4033519_4034533_4034684_4035429_4035552_4042905_4043057_4049589_4049718_4050879_4050957_4088703
ENSMUST00000111180.9	chr5	+	1456	6	FSM	ENSMUSG00000053388.11	ENSMUST00000111180.9	1456	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.31516738055805	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTGGTCTGTCTTGC	NA	False	NA	NA	False	NA	NA	NA	135382148	135396508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135382549_135387708_135387805_135392581_135392813_135392903_135392927_135395394_135395520_135395927
ENSMUST00000111187.10	chr5	+	564	3	FSM	ENSMUSG00000029681.13	ENSMUST00000111187.10	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	118	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAAGTGTCTATTTTTG	8775	False	NA	NA	False	AAAACA	-3	NA	135197242	135202302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135197453_135199940_135200017_135202024
ENSMUST00000111218.8	chr5	+	1387	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111218.8	1387	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	38.4988311510882	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAGAAAAAAAATAAAAATA	3436	False	NA	16	True	NA	NA	NA	134961245	134970056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUST00000111222.2	chr2	-	3710	6	FSM	ENSMUSG00000048058.18	ENSMUST00000111222.2	3710	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	25.560907652116	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCGTGTGAATGGTTCT	NA	False	NA	-2	True	AATAAA	-18	NA	102016703	101780547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943973_101944025_102016624
ENSMUST00000111230.8	chr1	+	1586	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_4	118.904373342615	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327613	172334947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ENSMUST00000111231.10	chr2	-	949	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	-19	1343	0	0	multi-exon	FALSE	canonical	3	119	junction_5	14.4299072146089	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCTCTGTGGAAATGTA	NA	False	NA	-20	True	AATAAA	-15	NA	101459354	101392468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
ENSMUST00000111234.10	chr14	-	4051	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111234.10	4051	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	13.3813948598441	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAGAACAGAAAAGG	NA	False	NA	NA	False	NA	NA	NA	61283918	61201484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61283563
ENSMUST00000111236.4	chr14	-	3958	10	FSM	ENSMUSG00000060548.14	ENSMUST00000111236.4	3958	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	15.475986974649	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATTGATACTTGTTA	NA	False	NA	-26	True	AATACA	-32	NA	61275399	61201323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_61203915_61208277_61208681_61209429_61209533_61210950_61211077_61212038_61212204_61234053_61234140_61242523_61242703_61261617_61261729_61262192_61262286_61275298
ENSMUST00000111237.9	chr2	-	4409	24	FSM	ENSMUSG00000027194.17	ENSMUST00000111237.9	4409	24	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_8	56.2706462844556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTGGTGTAGTTTTTC	NA	False	NA	-2	True	AATAAA	-21	NA	94237024	94131111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ENSMUST00000111238.8	chr2	-	4590	25	FSM	ENSMUSG00000027194.17	ENSMUST00000111238.8	4590	25	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	40.2833497103814	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTGGTGTAGTTTTTC	NA	False	NA	-2	True	AATAAA	-21	NA	94237034	94131111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ENSMUST00000111240.8	chr2	-	1395	10	FSM	ENSMUSG00000040174.15	ENSMUST00000111240.8	1395	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	50.3744007102177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGAACATGTTTGTTCC	8798	False	NA	80	True	AATACA	-24	NA	93841152	93810894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838472_93838768_93838938_93841027
ENSMUST00000111244.5	chr5	-	3461	30	FSM	ENSMUSG00000023079.15	ENSMUST00000111244.5	3461	30	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_29	53.0244374146404	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485110	134386509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ENSMUST00000111245.9	chr5	-	3299	29	FSM	ENSMUSG00000023079.15	ENSMUST00000111245.9	3299	29	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	59.2579431513667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCCTTTTTAAATAAGTAA	NA	False	NA	NA	False	NA	NA	NA	134485443	134386550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUST00000111261.12	chr5	-	4381	34	FSM	ENSMUSG00000060261.17	ENSMUST00000111261.12	4381	34	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_23	69.7198249746108	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	635	False	NA	-6	True	AATAAA	-28	NA	134343600	134266690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ENSMUST00000111265.9	chr2	-	3751	10	FSM	ENSMUSG00000027217.14	ENSMUST00000111265.9	3751	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	5.53774924194538	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164832	93032104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
ENSMUST00000111266.8	chr2	+	2703	8	FSM	ENSMUSG00000068735.15	ENSMUST00000111266.8	2703	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	82.3119997699148	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTGTCCTGTTTTAT	NA	False	NA	20	True	NA	NA	NA	93017892	93032104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_93018093_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
ENSMUST00000111272.3	chr2	-	3012	6	FSM	ENSMUSG00000075028.13	ENSMUST00000111272.3	3012	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.31516738055805	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGCTCCAGGATCTTT	NA	False	NA	NA	False	AATAAA	-28	NA	92876398	92815051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92817132_92819576_92819999_92823708_92823777_92842971_92843235_92843657_92843762_92876323
ENSMUST00000111285.9	chr14	-	5351	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	24.4798959581623	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTTTGGTGAAAATGA	8821	False	NA	-13	True	AATAAA	-28	NA	57049173	57028044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
ENSMUST00000111285.9-0	chr14	-	3016	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	0	2335	0	405	multi-exon	FALSE	canonical	3	22	junction_6	24.4798959581623	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTTGTTTTCTTGTG	8821	False	NA	1	True	NA	NA	NA	57049173	57030379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
ENSMUST00000111289.8	chr1	-	3041	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTGACTTGGTTCA	878	False	NA	2	True	ATTAAA	-23	NA	171173214	171168138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
ENSMUST00000111289.8-0	chr1	-	1362	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	6	1673	0	0	multi-exon	FALSE	canonical	3	17	junction_6	46.1904270986484	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	884	False	NA	-10	True	AATATA	-8	NA	171173208	171169811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
ENSMUST00000111295.8	chr1	-	1335	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_6	27.0025718939676	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	879	False	NA	-10	True	AATATA	-8	NA	171173213	171169811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ENSMUST00000111298.6	chr5	+	3570	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_4	20.4042479237372	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCCGTTTTAATTC	9017	False	NA	14	True	AATAAA	-15	NA	130251175	130272507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ENSMUST00000111300.8	chr1	+	2563	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTTTCTGAAACTGA	1192	False	NA	NA	False	AATAAA	-17	NA	171156712	171169899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUST00000111300.8-0	chr1	+	1651	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	263	649	0	0	multi-exon	FALSE	canonical	3	76	junction_1	69.9674209900579	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1455	False	NA	18	True	NA	NA	NA	171156975	171169250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUST00000111309.8	chr2	-	771	5	FSM	ENSMUSG00000027239.15	ENSMUST00000111309.8	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	1107.84859073792	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGCCCCTTCCCAGTT	NA	False	NA	NA	False	AATAAA	-42	NA	91762033	91760149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91760461_91761162_91761325_91761440_91761600_91761716_91761794_91761971
ENSMUST00000111322.2	chr2	+	1316	2	FSM	ENSMUSG00000027243.9	ENSMUST00000111322.2	1316	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGTTAAGAAATAAA	4715	False	NA	NA	False	NA	NA	NA	91542539	91549632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91543211_91548987
ENSMUST00000111325.5	chr14	-	1255	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	35.4547599061113	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137715	56134739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ENSMUST00000111327.8	chr1	-	2812	9	FSM	ENSMUSG00000005674.10	ENSMUST00000111327.8	2812	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	8.45484328654293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTGTTTCACAGATCC	9839	False	NA	NA	False	AGTAAA	-16	NA	171049753	171045370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472
ENSMUST00000111329.8	chr2	+	3201	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	49.9501526672271	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480204	91502671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUST00000111331.9	chr2	+	2883	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	81.5357368819887	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480462	91502671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUST00000111333.2	chr2	-	3740	4	FSM	ENSMUSG00000075040.10	ENSMUST00000111333.2	3740	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.54896090146283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGACAAAAG	NA	False	NA	NA	False	NA	NA	NA	91480136	91474032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495
ENSMUST00000111335.2	chr2	-	1969	14	FSM	ENSMUSG00000027249.16	ENSMUST00000111335.2	1969	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	6.38971066378313	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTAGATCTCAGTGT	NA	False	NA	NA	False	AATAAA	-6	NA	91466752	91455673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91455919_91456046_91456118_91458666_91458849_91459004_91459179_91459495_91459664_91460294_91460422_91460497_91460612_91460853_91461172_91463323_91463458_91463535_91463642_91465243_91465295_91465515_91465541_91466122_91466287_91466662
ENSMUST00000111336.10	chr1	-	1172	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	0	1999	0	243	multi-exon	TRUE	canonical	3	578	junction_5	147.434866975217	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
ENSMUST00000111338.10	chr2	+	6665	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	0	0	0	0	multi-exon	TRUE	canonical	3	508	junction_5	59.4884084586321	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATTTCCCAAAATGCTC	NA	False	NA	11	True	AATAAA	-16	NA	91357106	91451009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUST00000111343.2	chr5	+	2423	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	0	0	0	0	multi-exon	FALSE	canonical	3	14794	junction_4	293.478040064329	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAGTCATCTCTAGT	545	False	NA	21	True	AATATA	-23	NA	129097335	129101387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUST00000111350.10	chr1	-	2311	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	66.4981202741852	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATGCATAAAAACAAGTG	NA	False	NA	60	True	AATACA	-22	NA	170002526	169969506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUST00000111351.10	chr1	-	2287	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	44.8905335232274	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTTCTACCTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	170002515	169969570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUST00000111352.8	chr2	-	2228	9	FSM	ENSMUSG00000002109.15	ENSMUST00000111352.8	2228	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	15.7594217850783	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCCTTTGTATCTAACTA	3094	False	NA	-57	True	AATAAA	-4	NA	91067230	91041947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91064452_91065297_91067034
ENSMUST00000111353.4	chr1	-	1446	8	FSM	ENSMUSG00000026675.13	ENSMUST00000111353.4	1446	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	6.15115718331742	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTTCTCTGTGATCTT	NA	False	NA	NA	False	AATAAA	-24	NA	169796810	169783069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
ENSMUST00000111368.8	chr1	-	1992	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	36	377	0	0	multi-exon	FALSE	canonical	3	65	junction_13	32.5556419455247	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGTTATCCAGGATGTT	NA	False	NA	-9	True	AATAAA	-26	NA	169358997	169325879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
ENSMUST00000111372.8	chr2	-	5813	32	FSM	ENSMUSG00000040687.17	ENSMUST00000111372.8	5813	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.74084803040636	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTCCTGTGCACTCC	NA	False	NA	-1	True	AATAAA	-15	NA	91014163	90967704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973829_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988749_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91014093
ENSMUST00000111388.5	chr14	+	685	1	FSM	ENSMUSG00000044285.9	ENSMUST00000111388.5	685	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTATTCGGTCTGCATTC	NA	False	NA	NA	False	NA	NA	NA	46321584	46322269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_46321600_46322300
ENSMUST00000111390.8	chr5	-	2367	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	58.8981471316135	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGGCTTCTGTGACTG	NA	False	NA	-3	True	AATAAA	-19	NA	125418135	125354152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ENSMUST00000111393.8	chr5	-	8661	48	FSM	ENSMUSG00000029478.17	ENSMUST00000111393.8	8661	48	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_46	24.3193630042141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTCTGCTTCTCACTGG	NA	False	NA	0	True	AATATA	-17	NA	125256244	125094218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125230670_125230717_125256060
ENSMUST00000111402.9	chr5	-	8862	48	FSM	ENSMUSG00000029478.17	ENSMUST00000111402.9	8862	48	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_47	24.0857830143284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGCTTCTCACTGGGC	NA	False	NA	2	True	AATATA	-19	NA	125256278	125094216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ENSMUST00000111417.9	chr5	+	4092	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	10.2089285540757	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATGTTTCCTGTGTGGT	NA	False	NA	8	True	NA	NA	NA	124939754	124965694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
ENSMUST00000111432.10	chr1	+	2163	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTGGACTGATTTCTG	NA	False	NA	NA	False	ATTAAA	-18	NA	165591314	165602877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ENSMUST00000111432.10-0	chr1	+	914	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	0	1249	0	141	multi-exon	FALSE	canonical	3	459	junction_1	24.0554914035583	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTCAGAGAAAAATGCCA	NA	False	NA	17	True	AAAAAG	-24	NA	165591314	165601628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ENSMUST00000111435.9	chr1	-	2285	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_2	205.630737002035	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462098	165419808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ENSMUST00000111436.3	chr2	-	2389	10	FSM	ENSMUSG00000002105.16	ENSMUST00000111436.3	1291	10	-15	-1083	0	0	multi-exon	FALSE	canonical	3	19	junction_7	11.8831761976001	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4286	False	NA	0	True	AATAAA	-15	NA	90900643	90892135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896085_90896357_90896472_90898775_90899085_90900499
ENSMUST00000111448.2	chr2	+	4432	13	FSM	ENSMUSG00000005506.17	ENSMUST00000111448.2	4432	13	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_8	178.716935558876	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	NA	False	NA	15	True	ATTAAA	-15	NA	90828923	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ENSMUST00000111449.8	chr2	+	4441	13	FSM	ENSMUSG00000005506.17	ENSMUST00000111449.8	4441	13	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_6	110.098030812948	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	NA	False	NA	15	True	ATTAAA	-15	NA	90828923	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ENSMUST00000111451.10	chr2	+	4678	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111451.10	4678	14	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_7	113.564516501784	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	2317	False	NA	8	True	ATTAAA	-8	NA	90770741	90849835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ENSMUST00000111455.9	chr2	+	7579	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111455.9	7579	14	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_13	198.958233552233	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	1777	False	NA	8	True	ATTAAA	-8	NA	90818090	90849835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ENSMUST00000111461.13	chr2	-	1316	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGACTCCCCTCACA	NA	False	NA	-1	True	AATAAA	-26	NA	90748389	90741056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ENSMUST00000111461.13-0	chr2	-	786	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	249	281	-127	0	multi-exon	FALSE	canonical	3	312	junction_3	26.7332502076846	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAAGATTGTCTGGCTA	NA	False	NA	NA	False	NA	NA	NA	90748140	90741337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ENSMUST00000111464.8	chr2	+	2343	4	FSM	ENSMUSG00000005505.13	ENSMUST00000111464.8	2343	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	29.2726645334669	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTCTGTGTTGACT	2335	False	NA	NA	False	AATAAA	-42	NA	90735083	90740905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90735157_90736009_90736628_90737888_90737996_90739360
ENSMUST00000111467.4	chr2	+	2281	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCTTAGCCTGCTGC	214	False	NA	7	True	NA	NA	NA	90677616	90696984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000111467.4-1	chr2	+	1074	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111467.4	2281	12	-42	1249	0	0	multi-exon	FALSE	canonical	3	421	junction_3	644.761587047671	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	172	False	NA	51	True	NA	NA	NA	90677574	90695735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000111468.10	chr2	+	1066	12	FSM	ENSMUSG00000027282.18	ENSMUST00000111468.10	1066	12	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	628.312668913619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTGATTGGTGTCTGC	119	False	NA	48	True	NA	NA	NA	90677521	90695732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90677730_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000111474.8	chr5	-	1286	4	FSM	ENSMUSG00000029394.12	ENSMUST00000111474.8	1286	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	588.445975996664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATCTACCCAACCTC	7271	False	NA	NA	False	TTTAAA	-27	NA	124489717	124483667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124489203
ENSMUST00000111484.9	chr14	-	4048	18	FSM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_15	148.725217469731	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAAACACTAGAGAGC	2630	False	NA	NA	False	NA	NA	NA	54924388	54880184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
ENSMUST00000111490.2	chr1	+	1419	2	FSM	ENSMUSG00000041396.14	ENSMUST00000111490.2	1419	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGACTGTTCAATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	163822457	163824812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_163822547_163823482
ENSMUST00000111493.8	chr2	-	7124	22	FSM	ENSMUSG00000025314.17	ENSMUST00000111493.8	7124	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	20.1917115525034	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTTCGATTGATTCA	NA	False	NA	NA	False	TATAAA	-15	NA	90301680	90263232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90280316_90280326_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436
ENSMUST00000111497.5	chr9	+	2576	5	FSM	ENSMUSG00000032540.17	ENSMUST00000111497.5	2576	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	33.7073804974519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180794	122210589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122180905_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ENSMUST00000111529.8	chr19	-	5927	17	FSM	ENSMUSG00000025085.17	ENSMUST00000111529.8	5927	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	24.9621588609639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGCTGAGCACCTGGTA	NA	False	NA	NA	False	NA	NA	NA	57107441	57021321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_57025770_57027838_57027920_57028918_57028994_57029846_57029855_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
ENSMUST00000111535.8	chr6	-	1004	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	17	436	0	0	multi-exon	FALSE	canonical	3	74	junction_5	14.7723465374402	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTATTGTCCCATATT	NA	False	NA	-6	True	TATAAA	-24	NA	149090193	149059080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
ENSMUST00000111557.8	chr6	-	4651	21	FSM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	96	5084	0	-5084	multi-exon	FALSE	canonical	3	13	junction_11	5.03487835006964	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATGAGTAATTTTTTTA	NA	False	NA	NA	False	TATAAA	-17	NA	149003082	148894652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ENSMUST00000111560.10	chr9	-	2669	7	FSM	ENSMUSG00000061536.14	ENSMUST00000111560.10	2669	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	6.55108133567785	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGCCTAAAACTGTATTG	NA	False	NA	NA	False	ATTAAA	-9	NA	121534095	121512099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121533989
ENSMUST00000111566.9	chr5	-	4561	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111566.9	6133	24	293	1279	0	0	multi-exon	FALSE	canonical	3	15	junction_9	12.0135399352954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTCCGTCCTTGTTTT	9902	False	NA	NA	False	AATAAA	-18	NA	123822388	123717136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ENSMUST00000111569.9	chr6	-	3697	19	FSM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	9.04805415272352	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797735	148743989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ENSMUST00000111587.10	chr5	-	1576	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_3	53.1902246658162	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	8922	False	NA	-12	True	AATAAA	-25	NA	123662239	123649767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUST00000111594.3	chr1	+	1464	2	FSM	ENSMUSG00000026698.9	ENSMUST00000111594.3	3290	2	14	1812	12	-707	multi-exon	FALSE	canonical	3	13	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTGTCTAGTATTTT	NA	False	NA	10	True	ATTAAA	-13	NA	161796768	161799192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_161796849_161797808
ENSMUST00000111610.12	chr14	-	1425	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	0	1422	0	0	multi-exon	FALSE	canonical	3	714	junction_5	1135.23408929612	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000111611.8	chr1	-	4072	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	12.7525722571391	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTGGATTTTTT	NA	False	NA	3	True	AATAAA	-37	NA	160959081	160915944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ENSMUST00000111620.10	chr1	+	1910	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	18.1710621593786	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTATTTATTCTGTT	NA	False	NA	20	True	AATAAA	-26	NA	160898336	160913908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
ENSMUST00000111623.9	chr6	+	4782	28	FSM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	81.0878370126214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7641	False	NA	13	True	AATAAA	-17	NA	146790086	146933523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146901159_146901193_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ENSMUST00000111624.8	chr2	+	2556	15	FSM	ENSMUSG00000027075.17	ENSMUST00000111624.8	2556	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	20.7551321413303	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGGTGTGTATCTGT	307	False	NA	12	True	AATAAA	-14	NA	84670542	84693925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUST00000111625.2	chr2	+	2487	14	FSM	ENSMUSG00000027075.17	ENSMUST00000111625.2	2487	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	11.2969598465759	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTGACTGGAGGAGTA	733	False	NA	25	True	AATAAA	-27	NA	84670968	84693938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUST00000111632.5	chr14	-	2103	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	11.1385064766607	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATTGTTAATCCGGG	9982	False	NA	-11	True	AATAAA	-16	NA	52150945	52142739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
ENSMUST00000111663.9	chr6	+	2880	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	146.964470385041	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCAGGGTTAATTT	NA	False	NA	29	True	AATAAA	-20	NA	146479356	146500696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ENSMUST00000111664.8	chr2	-	1926	7	FSM	ENSMUSG00000050043.17	ENSMUST00000111664.8	1926	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	582.842865235181	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	5229	False	NA	-7	True	AATAAA	-17	NA	84508462	84501659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506440_84506502_84508194
ENSMUST00000111665.8	chr2	-	2282	9	FSM	ENSMUSG00000050043.17	ENSMUST00000111665.8	2282	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	552.971009637938	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTTGCTGTTTTTCCTT	4519	False	NA	-7	True	AATAAA	-17	NA	84509172	84501659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194_84508519_84508986
ENSMUST00000111670.9	chr2	-	5047	17	FSM	ENSMUSG00000034101.15	ENSMUST00000111670.9	5047	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_16	78.6638417571885	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGAGGTCTGTGTCATT	NA	False	NA	-36	True	AATAAA	-18	NA	84481084	84431124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84433245_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ENSMUST00000111691.2	chr2	-	5380	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111691.2	5380	19	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_18	37.1560356827033	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481109	84431126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ENSMUST00000111692.8	chr2	-	5480	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111692.8	6170	19	-20	710	0	0	multi-exon	FALSE	canonical	3	20	junction_17	80.2536295860094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481109	84431126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ENSMUST00000111697.9	chr2	-	5294	18	FSM	ENSMUSG00000034101.15	ENSMUST00000111697.9	5294	18	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	44.1949127323348	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGAGGTCTGTGTCATT	NA	False	NA	-36	True	AATAAA	-18	NA	84481084	84431124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ENSMUST00000111704.8	chr6	+	5446	5	FSM	ENSMUSG00000030259.13	ENSMUST00000111704.8	5446	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.44862367942584	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTGTTGCTTGCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	145692473	145766805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145692693_145754109_145754289_145760778_145761669_145762223_145762369_145762792
ENSMUST00000111710.8-1	chr6	-	4802	6	FSM	ENSMUSG00000030265.15	ENSMUST00000111710.8	1194	6	-62	-3546	0	0	multi-exon	FALSE	canonical	3	20	junction_2	471.744252747185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAATTATGTAGTTTT	NA	False	NA	-8	True	AATAAA	-22	NA	145195965	145162424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_145166451_145170799_145170924_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ENSMUST00000111717.4	chr2	-	2962	7	FSM	ENSMUSG00000027082.16	ENSMUST00000111717.4	2962	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	78.2852689420771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTATTTATGATTATT	NA	False	NA	NA	False	AATAAA	-21	NA	84304147	84271066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84273270_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042
ENSMUST00000111721.2	chr6	+	1336	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111721.2	1336	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	139.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156911	145162265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145156971_145160909_145160998_145161076
ENSMUST00000111722.8	chr2	-	1232	8	FSM	ENSMUSG00000027082.16	ENSMUST00000111722.8	1232	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	72.9078255087077	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTGACTGTCCCCCTT	NA	False	NA	-2	True	AATAAA	-19	NA	84304128	84263198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84263529_84264585_84264766_84274353_84274465_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042
ENSMUST00000111724.8	chr6	+	1618	4	FSM	ENSMUSG00000040370.14	ENSMUST00000111724.8	1618	4	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	142.199390528464	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156900	145162265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145156979_145160247_145160511_145160909_145160998_145161076
ENSMUST00000111726.10	chr6	+	1374	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	0	0	0	0	multi-exon	TRUE	canonical	3	230	junction_1	45.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156881	145162265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145156979_145160909_145160998_145161076
ENSMUST00000111729.10	chr5	+	874	4	FSM	ENSMUSG00000029462.19	ENSMUST00000111729.10	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1030.830194013	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGCATGAAGAGAAAGAATC	732	False	NA	-58	True	NA	NA	NA	122492484	122501274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122492540_122498091_122498268_122500098_122500335_122500867
ENSMUST00000111735.10	chr14	+	5485	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	6.92306932573182	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACGAATCCTAT	NA	False	NA	NA	False	AAGAAA	-27	NA	48683838	48752913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ENSMUST00000111735.10-0	chr14	+	2953	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	0	2532	0	134	multi-exon	TRUE	canonical	3	23	junction_12	6.92306932573182	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTTTTATACATATTAC	NA	False	NA	NA	False	AATAAA	-17	NA	48683838	48750381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ENSMUST00000111737.3	chr19	+	2340	6	FSM	ENSMUSG00000025025.15	ENSMUST00000111737.3	2340	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	29.7859027058103	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCTTTATGAT	4414	False	NA	NA	False	TTTAAA	-25	NA	53317843	53361585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53318152_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ENSMUST00000111738.8	chr5	-	2044	14	FSM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	0	3673	0	-234	multi-exon	FALSE	non_canonical	0	0	junction_4	9.03379584978658	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGGGCTGTGGTGTT	NA	False	NA	0	True	TTTAAA	-17	NA	122402523	122379583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ENSMUST00000111742.8	chr6	-	2556	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	0	0	0	0	multi-exon	FALSE	canonical	3	3523	junction_3	257.484057758922	6532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8485	False	NA	-24	True	AATAAA	-16	NA	145021910	144944883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ENSMUST00000111754.9	chr1	+	2491	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	87	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCAGGTTTTATTGTT	NA	False	NA	3	True	AATAAA	-15	NA	155911471	155929275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_155911667_155916820_155916881_155927039
ENSMUST00000111758.9	chr6	-	4062	24	FSM	ENSMUSG00000030279.16	ENSMUST00000111758.9	4062	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	50.5206540330977	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	143045502	142956653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143019388_143019514_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
ENSMUST00000111760.3	chr2	-	4597	32	FSM	ENSMUSG00000027002.14	ENSMUST00000111760.3	4597	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	195.930109223448	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATGATTTCTTTAAAA	NA	False	NA	-6	True	AATAAA	-19	NA	80411724	80330861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80401556_80401575_80411201
ENSMUST00000111763.8	chr9	+	2986	6	FSM	ENSMUSG00000032446.15	ENSMUST00000111763.8	2869	6	649	-766	0	0	multi-exon	FALSE	canonical	2	3	junction_5	6.66333249958307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATTTTATTTATTTA	NA	False	NA	NA	False	AATAAA	-42	NA	118307928	118315200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_118308615_118309534_118309690_118310332_118310455_118311056_118311216_118311300_118311363_118313398
ENSMUST00000111770.2	chr5	-	3626	21	FSM	ENSMUSG00000029456.13	ENSMUST00000111770.2	3626	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	12.9348366823861	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCTGTTCTGAGCTAGAT	NA	False	NA	-7	True	NA	NA	NA	121798577	121759090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ENSMUST00000111783.8	chr5	-	1513	14	FSM	ENSMUSG00000029454.16	ENSMUST00000111783.8	1513	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	58.7492918250155	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTAAAGTTGCTATATA	NA	False	NA	-6	True	AATAAA	-20	NA	121683263	121663110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ENSMUST00000111785.9	chr2	+	5168	18	FSM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_14	7.70386143235054	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTATTTTTTGAG	NA	False	NA	19	True	AATAAA	-20	NA	79465695	79503310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ENSMUST00000111792.9	chr14	-	4174	25	FSM	ENSMUSG00000037572.18	ENSMUST00000111792.9	4174	25	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_16	87.7556582537876	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514314	47478400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504520_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ENSMUST00000111803.9	chr6	-	3389	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGGAGACCTATCTTA	6180	False	NA	NA	False	AATAAA	-26	NA	142332813	142307101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ENSMUST00000111803.9-1	chr6	-	2864	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	0	525	0	220	multi-exon	FALSE	canonical	3	113	junction_14	18.9118524546197	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCCGTTTCACCAATTA	6180	False	NA	-3	True	ATTAAA	-18	NA	142332813	142307626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ENSMUST00000111808.11	chr19	+	4158	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111808.11	4158	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	24.9206741481847	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGCTGTGCGTCTGG	NA	False	NA	40	True	AATAAA	-22	NA	47167258	47247880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ENSMUST00000111816.3	chr9	-	9332	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTCCGTGTGATTTT	NA	False	NA	-3	True	AATAAA	-22	NA	114393437	114336200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
ENSMUST00000111816.3-0	chr9	-	5141	4	FSM	ENSMUSG00000079259.3	ENSMUST00000111816.3	9332	4	77	4114	77	-4114	multi-exon	FALSE	canonical	3	18	junction_1	6.79869268479038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTGTACCAAAGAATAGAAA	NA	False	NA	37	True	NA	NA	NA	114393360	114340314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114343165_114344800_114344936_114354021_114354190_114391372
ENSMUST00000111817.8	chr14	-	4171	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.21091447478	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059699	47045605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ENSMUST00000111818.8	chr2	-	3255	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	52.4085273558816	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTCTTTTTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	77776697	77726111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ENSMUST00000111819.8	chr2	-	3090	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111819.8	3090	20	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	57.3448044097962	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTCTTTTTTTCTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	77776527	77726109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
ENSMUST00000111820.4	chr9	+	2921	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGGAAAACAAAAGGAGC	NA	False	NA	NA	False	NA	NA	NA	114230172	114236344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_114230338_114233588
ENSMUST00000111828.4	chr14	-	3548	13	FSM	ENSMUSG00000037697.20	ENSMUST00000111828.4	9802	13	-1	6255	0	0	multi-exon	FALSE	canonical	3	71	junction_11	14.0049594390305	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTTCAATTATTTTTT	NA	False	NA	60	True	ATTAAA	-18	NA	45895600	45832178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45867036_45867211_45894678
ENSMUST00000111830.9	chr2	-	2642	8	FSM	ENSMUSG00000027016.18	ENSMUST00000111830.9	2642	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	1.29362644830535	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATCTGCTGG	NA	False	NA	NA	False	AATAAA	-7	NA	77349962	77240977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_77242485_77244297_77244400_77244916_77245096_77246073_77246320_77280494_77280658_77307078_77307190_77333883_77334027_77349771
ENSMUST00000111836.4	chr1	-	5696	23	FSM	ENSMUSG00000042772.16	ENSMUST00000111836.4	3928	23	0	-1768	0	-106	multi-exon	FALSE	canonical	3	60	junction_6	70.0173089579927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTTGATTTGGGGTTG	NA	False	NA	-4	True	AATAAA	-20	NA	152778397	152712852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ENSMUST00000111861.4	chr9	-	3223	18	FSM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	92.4204698786755	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537312	113483539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514507_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ENSMUST00000111867.9	chr19	+	4417	12	FSM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	86	-2756	0	0	multi-exon	FALSE	canonical	3	32	junction_6	20.0218888484042	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTGTGCTTCTTTCT	NA	False	NA	19	True	ATTAAA	-19	NA	46385442	46477243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ENSMUST00000111878.8	chr6	-	3560	21	FSM	ENSMUSG00000015766.15	ENSMUST00000111878.8	3560	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	34.6389953664941	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGCTTATTGTGTAAAA	3998	False	NA	-83	True	NA	NA	NA	137626283	137455174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137626049
ENSMUST00000111879.5	chr9	+	3005	5	FSM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.8483869768736	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	NA	False	NA	NA	False	AATAAA	-20	NA	111268148	111318186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_111268421_111296545_111298384_111311685_111311819_111313984_111314153_111317592
ENSMUST00000111881.4	chr19	+	3141	22	FSM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	7.7415743094745	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAATGTGCTGCCCAT	NA	False	NA	28	True	AATAAA	-33	NA	46294134	46300466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ENSMUST00000111887.10	chr1	+	2783	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	396.626282743927	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGTCTGTAGCCTTTTA	NA	False	NA	11	True	ATTAAA	-28	NA	151220259	151232550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
ENSMUST00000111899.8	chr19	+	5246	14	FSM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	0	0	0	0	multi-exon	TRUE	canonical	3	236	junction_7	80.0611452719015	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGCGTGTCCTTTCTG	NA	False	NA	5	True	AATAAA	-17	NA	46044977	46061350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ENSMUST00000111908.3	chr14	+	3974	7	FSM	ENSMUSG00000041445.10	ENSMUST00000111908.3	3974	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	15.3260852434302	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	4890	False	NA	6	True	AATAAA	-16	NA	34097421	34126244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_34097736_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
ENSMUST00000111913.9	chr1	-	3273	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	14.7515920312223	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGAATTTTAAAATAGGA	633	False	NA	NA	False	AATAAA	-21	NA	150268831	150237055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ENSMUST00000111915.8	chr6	+	4221	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_6	10.7558123821495	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGTCCTTTTCTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	135174974	135213240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ENSMUST00000111917.3	chr14	-	3317	11	FSM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	23.9376272842569	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032323	33958989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
ENSMUST00000111920.2	chr2	+	2534	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_7	23.0465367711259	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTATTTTGTTTATTG	6506	False	NA	6	True	ATTAAA	-19	NA	76505624	76527172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ENSMUST00000111930.9	chr2	+	3853	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	10.6640621820309	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGAGTGCTGGCGTG	NA	False	NA	NA	False	AATAAA	-35	NA	76236901	76426940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ENSMUST00000111932.8	chr6	-	1711	5	FSM	ENSMUSG00000032641.19	ENSMUST00000111932.8	1711	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42.5910788780937	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGTGAGAATTGATTTA	NA	False	NA	-23	True	ATTAAA	-12	NA	134874826	134846124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134847407_134864592_134864749_134869161_134869351_134874124_134874177_134874794
ENSMUST00000111936.4	chr19	+	2064	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	132.758623339525	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGAATCTCTCTTGCTT	NA	False	NA	13	True	TATAAA	-15	NA	45352271	45517728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUST00000111937.2	chr6	+	3272	4	FSM	ENSMUSG00000032652.14	ENSMUST00000111937.2	612	4	111	-2771	111	0	multi-exon	FALSE	canonical	0	0	junction_2	9.41629792788369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCAGTTGCCTGTTTGAC	NA	False	NA	8	True	AATAAA	-19	NA	134807328	134835894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134807408_134826065_134826264_134829240_134829278_134832936
ENSMUST00000111957.10	chr1	+	580	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	245.711664806989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615352	143622514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
ENSMUST00000111959.2	chr5	+	1526	8	FSM	ENSMUSG00000029364.16	ENSMUST00000111959.2	1526	8	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	55.7871318641912	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCTCTGGTGGCGGC	NA	False	NA	3	True	AATAAA	-15	NA	117501586	117515872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ENSMUST00000111960.2	chr6	+	1578	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	10	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTCTCTAACACTAT	NA	False	NA	5	True	GATAAA	-16	NA	134391390	134415078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
ENSMUST00000111960.2-0	chr6	+	2162	6	FSM	ENSMUSG00000030200.14	ENSMUST00000111960.2	1578	6	37	-621	0	0	multi-exon	FALSE	canonical	3	57	junction_3	10	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTTGCCTGTAACC	NA	False	NA	13	True	AATAAA	-25	NA	134391427	134415699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134391599_134400573_134401026_134404258_134404424_134407028_134407100_134409108_134409376_134414663
ENSMUST00000111962.8	chr2	+	5150	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTTTTATCATTTTG	7481	False	NA	3	True	ATTAAA	-18	NA	75489610	75499751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUST00000111962.8-1	chr2	+	2241	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	2909	0	377	multi-exon	FALSE	canonical	3	3726	junction_1	2097.55310779012	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCTGACTGGCTGGCA	7481	False	NA	13	True	AATAAA	-13	NA	75489610	75496842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUST00000111963.8	chr6	+	5707	9	FSM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	19.2418814048939	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTCCCAAGTCTCTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	134012662	134247121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ENSMUST00000111964.8	chr2	+	1654	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	0	0	0	0	multi-exon	FALSE	canonical	3	3912	junction_1	2045.95805431099	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAGTTAACACGTGAA	7475	False	NA	NA	False	NA	NA	NA	75489604	75496183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUST00000111967.8	chr5	+	4236	10	FSM	ENSMUSG00000066894.15	ENSMUST00000111967.8	4236	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	6.48264539813992	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTTCTATGGTCTTGAT	NA	False	NA	3	True	AATAAA	-19	NA	117457147	117493070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
ENSMUST00000111985.2	chr19	-	3548	25	FSM	ENSMUSG00000051984.14	ENSMUST00000111985.2	3548	25	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_17	4.98051759916131	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTCCCTTGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	44534286	44505645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520210_44520732_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44532139_44532252_44534226
ENSMUST00000111991.9	chr9	-	3829	22	FSM	ENSMUSG00000032480.18	ENSMUST00000111991.9	3829	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_20	148.964330905375	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	False	NA	-3	True	AATAAA	-19	NA	109946479	109913389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944558_109944651_109946425
ENSMUST00000111993.9	chr2	-	3321	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	86.7381968506344	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGTCTGTGTCCAACA	NA	False	NA	29	True	AAAAAG	-43	NA	74409292	74350634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ENSMUST00000111994.10	chr14	+	3343	10	FSM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	198.662813783171	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCAGTTGTGTTTGTGTT	NA	False	NA	-2	True	ATTAAA	-13	NA	31887747	31901204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31887780_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUST00000111996.8	chr2	-	723	5	FSM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_4	1495.60896878161	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741669	73738790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741585
ENSMUST00000111999.8	chr5	-	2026	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_7	27.0313499024932	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTGACTCGGCACA	NA	False	NA	-4	True	AATAAA	-21	NA	116162567	116151648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ENSMUST00000112000.2	chr14	-	486	2	FSM	ENSMUSG00000021905.15	ENSMUST00000112000.2	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGAAAGGGCAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	31807566	31806652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31806939_31807366
ENSMUST00000112007.8	chr2	-	4195	14	FSM	ENSMUSG00000027104.19	ENSMUST00000112007.8	4195	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	109.668839867438	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722975	73646852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
ENSMUST00000112010.9	chr2	-	4037	13	FSM	ENSMUSG00000027104.19	ENSMUST00000112010.9	4037	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_9	68.6093510795398	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722880	73646852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUST00000112016.9	chr2	-	3943	12	FSM	ENSMUSG00000027104.19	ENSMUST00000112016.9	3943	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	77.3989343681314	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTTTTTAATCTGT	NA	False	NA	1	True	AATAAA	-26	NA	73722983	73646852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUST00000112024.10	chr2	-	4050	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	0	0	0	0	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTGAGCTGCCTACTG	NA	False	NA	44	True	NA	NA	NA	73605690	73441003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ENSMUST00000112024.10-0	chr2	-	2374	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	0	1676	0	0	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	59	True	ATTAAA	-23	NA	73605690	73442679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ENSMUST00000112025.3	chr1	-	565	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTCCACAAGATGCACG	NA	False	NA	-1	True	ATTAAA	-16	NA	138784590	138779720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_138779912_138781308_138781411_138784318
ENSMUST00000112028.10	chr19	-	3136	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_11	27.8217466521579	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	44058224	44023382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
ENSMUST00000112046.2	chr1	+	4937	2	FSM	ENSMUSG00000041483.15	ENSMUST00000112046.2	4937	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATATCACTTAGTCTCT	NA	False	NA	16	True	AATAAA	-29	NA	136552638	136557791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_136552790_136553005
ENSMUST00000112047.10	chr19	+	1233	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	5.45435605731786	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTCTCAGGTTCTTTC	9274	False	NA	16	True	AATAAA	-19	NA	43741536	43757077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
ENSMUST00000112050.2	chr2	+	1897	4	FSM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	8.65383665716478	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTACTTTGGTTGTA	NA	False	NA	NA	False	AATAAA	-36	NA	73142997	73151140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646
ENSMUST00000112066.2	chr5	-	1432	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	359	3	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4.96865172858795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAATGTGTGGACTGTG	9379	False	NA	NA	False	AATAAA	-16	NA	115622425	115616071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622390
ENSMUST00000112067.8	chr5	-	1645	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	17.7623196683316	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGTGGACTGTGAAC	9448	False	NA	NA	False	AATAAA	-19	NA	115622356	115616068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622111
ENSMUST00000112090.2	chr5	-	729	2	FSM	ENSMUSG00000009013.6	ENSMUST00000112090.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTCTAGTCCATACT	NA	False	NA	-4	True	AGTAAA	-17	NA	115438971	115436563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115436893_115438571
ENSMUST00000112091.9	chrX	-	1447	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_2	7.5	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGCAATGCTTTTTAA	NA	False	NA	-8	True	ATTAAA	-24	NA	165262863	165240248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_165241340_165245310_165245339_165262535
ENSMUST00000112094.8	chr14	+	7800	30	FSM	ENSMUSG00000042323.18	ENSMUST00000112094.8	5154	30	-21	-2625	0	0	multi-exon	FALSE	canonical	3	61	junction_10	41.3660323524055	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8226	False	NA	14	True	AATAAA	-21	NA	30741105	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ENSMUST00000112095.8	chr14	+	7907	31	FSM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_27	38.4939244845498	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8215	False	NA	14	True	AATAAA	-21	NA	30741094	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ENSMUST00000112096.9	chr5	-	3112	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112096.9	3112	17	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_14	135.987361545108	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUST00000112097.8	chr5	-	3476	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112097.8	3476	17	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	376.541410197803	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGCTGCACCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	115410957	115379470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUST00000112098.11	chr14	+	6566	33	FSM	ENSMUSG00000042323.18	ENSMUST00000112098.11	6566	33	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_15	51.2482373934704	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTATTACAGATCCCAAT	8215	False	NA	NA	False	AAGAAA	-28	NA	30741094	30841998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30778192_30778238_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ENSMUST00000112099.2	chrX	+	1350	1	FSM	ENSMUSG00000079297.5	ENSMUST00000112099.2	1350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTTCAAGTTAAACAATG	NA	False	NA	NA	False	NA	NA	NA	32943123	32944473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_32943100_32944500
ENSMUST00000112101.8	chr2	+	4156	26	FSM	ENSMUSG00000027111.17	ENSMUST00000112101.8	4156	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.199447759772	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTTTATAAACATGCAAG	NA	False	NA	NA	False	NA	NA	NA	71617283	71687115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71617353_71617427_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
ENSMUST00000112109.8	chr5	-	1071	7	FSM	ENSMUSG00000029544.17	ENSMUST00000112109.8	1071	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	89.0561620551885	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAAACCGAGAA	7519	False	NA	-26	True	NA	NA	NA	115319481	115306772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115318850_115319031_115319458
ENSMUST00000112113.8	chr5	-	1621	6	FSM	ENSMUSG00000029544.17	ENSMUST00000112113.8	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	70.6693710174358	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGGTGGTCCTTGCTTT	8763	False	NA	-1	True	AATAAA	-20	NA	115332440	115306747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115307208_115310817_115310966_115311173_115311284_115313437_115313582_115314298_115314330_115331712
ENSMUST00000112115.2	chrX	-	2473	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_6	157.36096155725	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	168103290	168094525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
ENSMUST00000112121.6	chr5	-	5955	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_2	31.3249102153542	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4724	False	NA	-3	True	AATAAA	-16	NA	115296238	115281039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ENSMUST00000112137.2	chrX	-	2316	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_9	6.17646827325928	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAGAGGAGTTTTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	167456894	167437112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
ENSMUST00000112138.8	chr2	+	2466	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	83.3153580613376	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCTCAAATTTTCACT	NA	False	NA	12	True	AATAAA	-14	NA	71042101	71093635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUST00000112139.8	chr2	+	2483	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112139.8	2483	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	151.295501879233	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCAAATTTTCACTTTT	NA	False	NA	15	True	AATAAA	-17	NA	71042084	71093638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092994
ENSMUST00000112143.4	chr5	+	2181	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.38230690505755	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTCCTCATTTGTCAC	7858	False	NA	6	True	NA	NA	NA	115061322	115075974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
ENSMUST00000112151.2	chr6	-	1108	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	100.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	474	False	NA	-12	True	AATAAA	-36	NA	128339831	128334327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128335157_128336068_128336318_128339801
ENSMUST00000112152.8	chr6	-	2015	4	FSM	ENSMUSG00000048668.17	ENSMUST00000112152.8	2015	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	145.265274584121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTGTCTCAGTGGTC	530	False	NA	NA	False	CATAAA	-34	NA	128339775	128333962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128335157_128336068_128336318_128339020_128339148_128339330
ENSMUST00000112155.9	chr9	+	3040	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	89.886485340754	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGCGCTTTTTTTTTTTT	1170	False	NA	4	True	AGTAAA	-8	NA	108394308	108437191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUST00000112157.4	chr6	-	5462	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	340	-3893	265	0	multi-exon	TRUE	canonical	3	25	junction_7	24.4991836598692	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATCTGCGCTCGTGTGA	1697	False	NA	-4	True	NA	NA	NA	128277436	128201250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ENSMUST00000112160.4	chr5	-	1333	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGCTGTTCTGTGC	719	False	NA	0	True	ATTAAA	-23	NA	114952037	114946256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114947393_114951840
ENSMUST00000112172.4	chrX	-	768	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992311	165990088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_165990532_165990932_165991048_165992101
ENSMUST00000112172.4-0	chrX	-	602	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	166	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_1	25.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTCTGCTTGGTGA	NA	False	NA	0	True	AATAAA	-15	NA	165992145	165990088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_165990532_165990932_165991048_165992101
ENSMUST00000112173.8	chr6	-	3819	8	FSM	ENSMUSG00000030352.16	ENSMUST00000112173.8	3819	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	35.3305094494713	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGACTGTTATTTAGTGGT	6163	False	NA	-2	True	AATAAA	-26	NA	128120526	127938358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128120476
ENSMUST00000112179.9	chr2	-	2297	9	FSM	ENSMUSG00000041975.18	ENSMUST00000112179.9	2297	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	32.9393381840012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885927	70794904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ENSMUST00000112185.9	chr5	-	5032	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTGCCCCCTCTAGTT	NA	False	NA	-3	True	AATAAA	-20	NA	114911556	114865467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUST00000112185.9-0	chr5	-	2864	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	0	2168	0	0	multi-exon	FALSE	canonical	3	90	junction_6	46.75943160951	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911556	114867635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUST00000112186.9	chr2	-	2347	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	14.8332292963476	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885927	70794904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ENSMUST00000112188.8	chrX	-	4050	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	3.35410196624968	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTATTCTCCAATATTT	NA	False	NA	-2	True	AATAAA	-20	NA	165293474	165282807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
ENSMUST00000112198.3	chr1	+	5413	26	FSM	ENSMUSG00000042207.18	ENSMUST00000112198.3	5413	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	193.648853340266	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAACAACTA	6736	False	NA	-20	True	NA	NA	NA	134487929	134559260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170
ENSMUST00000112201.8	chr2	+	2417	11	FSM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	267.323493168857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGTTCTAAGTGGCG	NA	False	NA	20	True	AATAAA	-20	NA	70491919	70522069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70492105_70502908_70503106_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUST00000112205.2	chr2	+	1196	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_6	27.9463772249642	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGAGGCCTCCCGTTCAGTC	NA	False	NA	9	True	AATAAA	-18	NA	70491933	70519704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ENSMUST00000112207.8	chr14	-	2139	15	FSM	ENSMUSG00000021948.18	ENSMUST00000112207.8	2139	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	15.3483363453968	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATAATAGGCTGTATAT	423	False	NA	-7	True	NA	NA	NA	30329779	30317548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564
ENSMUST00000112210.11	chr14	-	2777	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_17	15.936508975905	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTGGGGACATTTA	5421	False	NA	-3	True	AATAAA	-17	NA	30348167	30317310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ENSMUST00000112211.9	chr14	-	2617	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112211.9	2851	18	-2	236	0	0	multi-exon	FALSE	canonical	3	7	junction_8	28.1631431086409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATAATAGGCTGTATAT	5421	False	NA	-7	True	NA	NA	NA	30348167	30317548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324615_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ENSMUST00000112220.8	chr6	-	1604	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	0	629	0	-264	multi-exon	FALSE	canonical	3	81	junction_4	57.8721651573535	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGCTCATTGATACCAT	5265	False	NA	-18	True	AATAAA	-16	NA	126916550	126900641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUST00000112221.8	chr6	-	1871	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	48.7748334184751	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5265	False	NA	-5	True	AATAAA	-21	NA	126916550	126900377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUST00000112225.8	chr5	-	3226	16	FSM	ENSMUSG00000014158.13	ENSMUST00000112225.8	3226	16	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_12	3.46153466286591	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGGGTGAGGTTGG	NA	False	NA	NA	False	AATAAA	-18	NA	114796479	114760214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114760872_114761668_114761791_114763071_114763200_114764804_114765122_114766653_114766721_114766868_114767035_114768010_114768085_114768482_114768576_114768804_114768964_114771195_114771376_114772576_114772876_114773507_114773649_114774370_114774524_114778184_114778358_114782574_114782995_114796402
ENSMUST00000112237.2	chr1	+	3446	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATGTCTTGGTTCCA	NA	False	NA	5	True	NA	NA	NA	134343193	134361086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUST00000112237.2-0	chr1	+	2156	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	277	1013	169	-1013	multi-exon	FALSE	canonical	3	124	junction_1	322.905874956825	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343470	134360073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUST00000112238.9	chr17	+	5085	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_4	10.9288608738514	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748138	88797961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ENSMUST00000112239.9	chr5	+	1602	11	FSM	ENSMUSG00000041939.15	ENSMUST00000112239.9	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	36.3257484437692	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCTTGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	114582346	114598538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588301_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUST00000112247.9	chrX	-	2479	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112247.9	2479	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	17.508598470699	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTCTGGTGCTTTTCAT	NA	False	NA	NA	False	TATAAA	-39	NA	163763293	163719313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_163720300_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ENSMUST00000112251.9	chr2	+	8081	39	FSM	ENSMUSG00000044308.18	ENSMUST00000112251.9	8081	39	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	32.385457647469	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATGTTTATGTTTTC	4326	False	NA	23	True	AATAAA	-37	NA	69727589	69854357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784708_69786310_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ENSMUST00000112257.10	chrX	+	3212	6	FSM	ENSMUSG00000031381.17	ENSMUST00000112257.10	3212	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	78.77715404862	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTTTTGTCTCAGTTT	NA	False	NA	23	True	AATAAA	-23	NA	163202782	163216907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_163202837_163205579_163205983_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ENSMUST00000112266.8	chr2	+	2194	4	FSM	ENSMUSG00000027088.11	ENSMUST00000112266.8	2194	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	37.7918274528002	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCTTCTGAAATCTTTT	NA	False	NA	26	True	AATAAA	-16	NA	69619993	69627567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69620249_69620629_69620666_69622680_69622836_69625819
ENSMUST00000112268.4-1	chr14	+	903	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	128	647	0	175	multi-exon	FALSE	canonical	3	836	junction_3	72.5443829665674	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACATGTAAATTTGCTT	NA	False	NA	32	True	AATAAA	-21	NA	29690392	29696972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUST00000112275.8	chr5	+	1733	5	FSM	ENSMUSG00000029591.15	ENSMUST00000112275.8	1733	5	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_2	36.0728429708555	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCGGTGTGCCGACTATT	NA	False	NA	18	True	AATAAA	-14	NA	114270053	114277379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUST00000112279.2	chr5	-	899	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_3	133.312498372141	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTGTATTTGGGGGGGG	7978	False	NA	-11	True	AATAAA	-13	NA	114266279	114261995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
ENSMUST00000112289.9	chrX	-	1978	11	FSM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	-72	829	0	-829	multi-exon	FALSE	canonical	3	107	junction_1	287.175643117588	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGTCTTTTTATAGC	NA	False	NA	-6	True	AATAAA	-17	NA	162741657	162719267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ENSMUST00000112294.9	chrX	+	3199	5	FSM	ENSMUSG00000031367.16	ENSMUST00000112294.9	3199	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	15.8192920195564	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	-2	True	AATAAA	-13	NA	162692140	162712542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162709898
ENSMUST00000112295.9	chr9	+	1770	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	47	885	0	0	multi-exon	FALSE	canonical	3	94	junction_7	12.9807549857472	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCAGTCCTTGTTGTTC	NA	False	NA	10	True	NA	NA	NA	107926487	107929115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUST00000112298.10	chr5	-	5584	14	FSM	ENSMUSG00000042121.17	ENSMUST00000112298.10	5584	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	101.835346858655	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114131840	114077825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ENSMUST00000112301.8	chrX	+	3099	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	44.8724185955837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATGCAGTGTCATTTAT	NA	False	NA	NA	False	NA	NA	NA	161684865	161815321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUST00000112301.8-0	chrX	+	2358	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	-265	1006	0	0	multi-exon	FALSE	canonical	2	41	junction_1	44.8724185955837	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGGGCCCGGCAGAAAGT	NA	False	NA	11	True	ATTAAA	-17	NA	161684600	161814315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUST00000112304.10	chr17	+	3323	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_5	340.544857544494	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTGGCATACTTGTGGA	NA	False	NA	19	True	AATAAA	-31	NA	85265436	85324625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ENSMUST00000112307.4	chr17	+	1499	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112307.4	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	757.421256633322	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTGGTTTTATTCCA	NA	False	NA	11	True	AATAAA	-19	NA	85301100	85331419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85330459_85330508_85331123
ENSMUST00000112308.9	chr17	-	4393	38	FSM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_25	55.1799102769645	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATGTATTTTTTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	85097986	85012674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ENSMUST00000112311.8	chr5	+	1395	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	22.86676384819	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAAGCTGTCTACCTT	3650	False	NA	NA	False	AATAAA	-21	NA	113910863	113915859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
ENSMUST00000112312.8	chr5	+	1116	5	FSM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	304.763330307306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3650	False	NA	NA	False	AATAAA	-15	NA	113910863	113916334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113915140_113915893
ENSMUST00000112315.2	chrX	-	2525	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	64.8382603097893	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTATGTCTCATCTCCA	NA	False	NA	-7	True	AATAAA	-16	NA	161612450	161571913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ENSMUST00000112316.9	chrX	-	3715	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	58.6501491899211	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTTCTGTGTATTATT	NA	False	NA	NA	False	AGTAAA	-17	NA	161612450	161561914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ENSMUST00000112320.8	chr2	-	1527	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	307.891214554751	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036479	69024238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
ENSMUST00000112324.2	chr5	-	1102	5	FSM	ENSMUSG00000042216.14	ENSMUST00000112324.2	1102	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	10.6389614154766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGAGTGGTGTCTGTCC	NA	False	NA	NA	False	ATTAAA	-18	NA	113428453	113421817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192
ENSMUST00000112326.8	chrX	+	1430	10	FSM	ENSMUSG00000031353.14	ENSMUST00000112326.8	1430	10	0	0	0	0	multi-exon	FALSE	canonical	3	2711	junction_3	178.323675750959	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	161543457	161558891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731
ENSMUST00000112327.8	chrX	+	1862	12	FSM	ENSMUSG00000031353.14	ENSMUST00000112327.8	1862	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	868.427533053443	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	NA	False	NA	-32	True	NA	NA	NA	161543416	161561752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552786_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUST00000112335.4	chr19	-	937	6	FSM	ENSMUSG00000024990.14	ENSMUST00000112335.4	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	4.31740662898458	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCCTATGAGTTGAAGA	5209	False	NA	-5	True	ATTAAA	-13	NA	38113276	38105077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_38105358_38106719_38106933_38112476_38112584_38112743_38112881_38112966_38113096_38113205
ENSMUST00000112349.9	chr17	+	1728	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112349.9	1728	14	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_11	233.064406873892	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTGTTTTTTTTTTT	NA	False	NA	12	True	AATAAA	-17	NA	84013591	84100304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
ENSMUST00000112350.8	chr17	+	1723	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_11	147.297388673592	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGCCTTTGTTTTTTTTT	NA	False	NA	10	True	AATAAA	-15	NA	84013591	84100302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ENSMUST00000112359.9	chr5	+	3345	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	19.6098031274724	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTGATCAGCTAGCA	NA	False	NA	9	True	AATAAA	-15	NA	112490948	112526280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUST00000112363.10	chr17	+	5081	22	FSM	ENSMUSG00000032624.17	ENSMUST00000112363.10	5081	22	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	90.7300948604083	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCCAAGTGTTTCACGT	NA	False	NA	66	True	AATGAA	-3	NA	83658419	83787693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUST00000112377.8	chrX	+	3947	34	FSM	ENSMUSG00000031295.14	ENSMUST00000112377.8	3947	34	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	19.1295904422098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159285161	159374137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ENSMUST00000112384.10	chr14	+	468	5	FSM	ENSMUSG00000025290.18	ENSMUST00000112384.10	468	5	0	0	0	0	multi-exon	FALSE	canonical	3	5102	junction_4	3158.6347030798	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGATTGGATACAGGTA	NA	False	NA	NA	False	NA	NA	NA	24540748	24545500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497
ENSMUST00000112386.8	chr1	+	1202	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATCTGCGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	131794961	131800477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUST00000112386.8-0	chr1	+	1063	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	287	-148	0	0	multi-exon	FALSE	canonical	3	82	junction_1	6.13901457890434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGGTTGTGATGCTGGG	NA	False	NA	15	True	ATTAAA	-17	NA	131795248	131800625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUST00000112389.9	chr17	-	4231	35	FSM	ENSMUSG00000024242.16	ENSMUST00000112389.9	4231	35	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	71.4107713856684	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTAGTTGCTGGTCAGT	NA	False	NA	1	True	AATAAA	-20	NA	81035522	80887940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80900712_80900715_80904977_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ENSMUST00000112390.8	chr6	+	6537	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	116.234542355382	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1789	False	NA	14	True	AATAAA	-18	NA	125073124	125107554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUST00000112391.8	chr19	+	1293	5	FSM	ENSMUSG00000023307.15	ENSMUST00000112391.8	1293	5	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_3	54.8475158963467	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACTGTTTCCTGTCATC	NA	False	NA	12	True	AATAAA	-20	NA	37184966	37198475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037
ENSMUST00000112392.8	chr6	+	6652	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_8	111.644804298587	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGATCTGGTTCTG	1608	False	NA	8	True	AATAAA	-12	NA	125072943	125107548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUST00000112393.9	chr1	+	3538	13	FSM	ENSMUSG00000042251.13	ENSMUST00000112393.9	6900	13	17	3345	0	1740	multi-exon	FALSE	canonical	3	56	junction_3	6.31741420378799	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTATTGTGTTCTTGGA	NA	False	NA	5	True	AATAAA	-18	NA	131725135	131745854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131725325_131726333_131726421_131728831_131729065_131729463_131729551_131730038_131730173_131730457_131730578_131731789_131731866_131732324_131732387_131732630_131732710_131734636_131734709_131739772_131739942_131741628_131741729_131743724
ENSMUST00000112414.8	chr6	+	1498	5	FSM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	12.3490890352285	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTGTCGTTGTTCTTT	NA	False	NA	17	True	ACTAAA	-24	NA	125026651	125031157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452
ENSMUST00000112426.8	chr5	-	1389	4	FSM	ENSMUSG00000029507.17	ENSMUST00000112426.8	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	242.644229731972	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGCCTATTTTCCTTT	NA	False	NA	1	True	ATTAAA	-22	NA	110927833	110921532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552
ENSMUST00000112427.8	chr6	+	3072	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	45.3595634899632	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGAATTATACAGTTGTT	NA	False	NA	129	True	GATAAA	-5	NA	124986245	125014723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ENSMUST00000112428.8	chr6	+	3132	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112428.8	3132	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	64.1467068523397	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGGCAGTGAGCTACT	NA	False	NA	3	True	AATAAA	-14	NA	124986200	125014828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ENSMUST00000112437.8	chr17	-	3371	12	FSM	ENSMUSG00000059811.14	ENSMUST00000112437.8	3371	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	103.456941975757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAAGTGTTCTGAAATTA	3751	False	NA	-4	True	AATAAA	-16	NA	80203552	80155820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
ENSMUST00000112437.8-0	chr17	-	2628	12	FSM	ENSMUSG00000059811.14	ENSMUST00000112437.8	3371	12	72	671	0	0	multi-exon	FALSE	canonical	3	19	junction_11	103.456941975757	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3823	False	NA	NA	False	ATTAAA	-21	NA	80203480	80156491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
ENSMUST00000112439.9	chr6	-	1328	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	503.213915644191	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTATGCCAGGAGAT	NA	False	NA	-16	True	ATTAAA	-13	NA	124942501	124935375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUST00000112446.9	chr1	+	2153	15	FSM	ENSMUSG00000026427.17	ENSMUST00000112446.9	2153	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	169.094301066184	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCTTTGTGTCTTATTT	NA	False	NA	NA	False	AGTAAA	-24	NA	131080917	131099976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131099657
ENSMUST00000112456.9	chrX	+	3415	18	FSM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	0	3902	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.015540744912	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGGGGGGAATTGGA	NA	False	NA	16	True	AATAAA	-21	NA	158410267	158757163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUST00000112460.3	chr19	-	2760	7	FSM	ENSMUSG00000033610.17	ENSMUST00000112460.3	2760	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	45.38232646698	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	815	False	NA	-12	True	AATAAA	-18	NA	34855317	34788293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855085
ENSMUST00000112464.8	chrX	+	3366	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_9	109.675027103931	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ENSMUST00000112479.9	chr9	-	2030	11	FSM	ENSMUSG00000023249.16	ENSMUST00000112479.9	2030	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACGTTTTGAAGCAGG	NA	False	NA	NA	False	NA	NA	NA	106353868	106348187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351735_106351878_106352068_106352221_106352348_106352997_106353182_106353691
ENSMUST00000112482.2	chr5	+	747	6	FSM	ENSMUSG00000007080.15	ENSMUST00000112482.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_5	26.0967430918113	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTGTTCTGTTTTGTGC	NA	False	NA	9	True	AATAAA	-15	NA	110434206	110439101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824
ENSMUST00000112484.10	chr6	-	2219	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_10	22.1017847444248	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGCCCCTTGTATC	8730	False	NA	0	True	AATAAA	-28	NA	124710117	124697669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ENSMUST00000112495.8	chr2	+	2039	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	9.53190132434987	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTCTGATGGGATTTA	NA	False	NA	NA	False	AATAAA	-30	NA	61423420	61484515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ENSMUST00000112498.3	chr17	+	5995	17	FSM	ENSMUSG00000024074.9	ENSMUST00000112498.3	5995	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	3.24458683810435	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTAGTTTTTGTTTTG	NA	False	NA	NA	False	AATAAA	-31	NA	78507676	78684021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ENSMUST00000112505.9	chr5	-	2098	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	153.77594090104	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTAGAAACCCTTT	NA	False	NA	5	True	AATAAA	-43	NA	110417779	110406995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ENSMUST00000112507.4	chr17	-	2817	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	28.1765570527511	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGGAGTTTTCTTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	75858941	75844080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ENSMUST00000112508.9	chr19	-	2839	11	FSM	ENSMUSG00000024766.16	ENSMUST00000112508.9	2839	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	12.3109707172099	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTTTCTTAAAAGT	NA	False	NA	-1	True	NA	NA	NA	33567708	33532559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33556761_33556899_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
ENSMUST00000112509.2	chr2	-	1806	15	FSM	ENSMUSG00000026970.17	ENSMUST00000112509.2	1806	15	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAAAAAAAATCAAAGATT	NA	False	NA	NA	False	NA	NA	NA	60711814	60583065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ENSMUST00000112512.8	chr5	+	4685	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	178	3269	0	0	multi-exon	FALSE	canonical	3	40	junction_3	20.4320997313759	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTTACTTTTTATC	NA	False	NA	80	True	AAGAAA	-11	NA	110324744	110371067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ENSMUST00000112514.2	chr17	+	4870	30	FSM	ENSMUSG00000001870.17	ENSMUST00000112514.2	4870	30	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_17	5.33313515287757	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTGAGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	75485905	75698321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ENSMUST00000112516.8	chr17	+	5140	30	FSM	ENSMUSG00000001870.17	ENSMUST00000112516.8	5140	30	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_17	5.33313515287757	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTGGAAGAAGAAG	NA	False	NA	NA	False	AATAAA	-27	NA	75485804	75698331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ENSMUST00000112519.9	chr5	+	3159	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	36.3883322871989	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	False	NA	21	True	AATAAA	-21	NA	110283714	110319837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUST00000112523.8	chr6	-	3703	18	FSM	ENSMUSG00000008153.13	ENSMUST00000112523.8	3703	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	13.1777835480309	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	NA	False	NA	NA	False	AATAAA	-15	NA	124439703	124407717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732_124426891_124427664_124427719_124428264_124428428_124433835_124433949_124434814_124435097_124435502_124435689_124436116_124436267_124436724_124436934_124438490_124438687_124439068_124439192_124439640
ENSMUST00000112528.8	chr5	+	3158	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	12.7744862910412	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTATTTGTGAAGATGT	1949	False	NA	NA	False	NA	NA	NA	110257957	110277660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ENSMUST00000112529.8	chrX	-	3717	11	FSM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	141.867156170835	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCCGTCTCCATTATGC	NA	False	NA	-4	True	AATAAA	-11	NA	156275283	156226850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243413_156244171_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUST00000112529.8-0	chrX	-	1633	11	FSM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	243	1841	0	0	multi-exon	FALSE	canonical	0	0	junction_5	141.867156170835	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTAGCAGTGCTTCA	NA	False	NA	-46	True	ATTAAA	-27	NA	156275040	156228691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243413_156244171_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUST00000112530.8	chr6	-	3051	15	FSM	ENSMUSG00000005069.13	ENSMUST00000112530.8	3051	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	37.2975487513207	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGCTGCTGACGTT	NA	False	NA	-1	True	AATAAA	-44	NA	124391392	124373775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381182_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245
ENSMUST00000112531.8	chr6	-	3075	15	FSM	ENSMUSG00000005069.13	ENSMUST00000112531.8	3075	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	32.7566787083184	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGCTGCTGACGTT	NA	False	NA	-1	True	AATAAA	-44	NA	124391822	124373775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391725
ENSMUST00000112533.8	chr2	-	6901	35	FSM	ENSMUSG00000026980.16	ENSMUST00000112533.8	6901	35	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_19	109.794243708662	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213647	60122446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163301_60164789_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ENSMUST00000112538.4	chr1	-	4741	21	FSM	ENSMUSG00000036086.17	ENSMUST00000112538.4	4741	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	44.0595903294618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATATTCACGCAAACC	NA	False	NA	NA	False	NA	NA	NA	128030738	127882406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029511
ENSMUST00000112540.8	chr5	+	2081	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	47.4856703531591	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTCATGGTATCTTT	8370	False	NA	22	True	NA	NA	NA	110144386	110158277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ENSMUST00000112543.9	chr9	-	4081	5	FSM	ENSMUSG00000020258.17	ENSMUST00000112543.9	4081	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.67340285895511	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGCTATATGCACATG	5455	False	NA	-15	True	AATAAA	-9	NA	106035337	106030067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106033307_106033607_106033784_106034343_106034496_106034687_106035104_106035239
ENSMUST00000112544.8	chr5	+	2417	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	50.6315667894601	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGCTATC	NA	False	NA	NA	False	NA	NA	NA	110071265	110091802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
ENSMUST00000112547.8	chr5	-	2001	4	FSM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	29.0631496343164	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATACAATATGGTAAAGC	7946	False	NA	NA	False	NA	NA	NA	109899463	109883855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_109885666_109886815_109886877_109887064_109887192_109899460
ENSMUST00000112551.4	chrX	-	896	6	FSM	ENSMUSG00000025283.16	ENSMUST00000112551.4	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	481.393144944961	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAGGCAGAATTCTTGAA	NA	False	NA	NA	False	TTTAAA	-21	NA	153999341	153996310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153996664_153996892_153996955_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUST00000112558.10	chr9	-	3495	28	FSM	ENSMUSG00000032570.18	ENSMUST00000112558.10	5642	28	-39	2186	0	299	multi-exon	FALSE	canonical	3	56	junction_27	76.7098107267147	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATTTGGTTTAGAAAT	NA	False	NA	-4	True	AATAAA	-18	NA	105372332	105289822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372091
ENSMUST00000112559.8	chrX	-	1302	3	FSM	ENSMUSG00000055746.10	ENSMUST00000112559.8	1302	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	11	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAATGTTAATAATCGT	NA	False	NA	NA	False	NA	NA	NA	153815496	153810479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153811648_153812583_153812673_153815451
ENSMUST00000112560.8	chr5	+	2318	6	FSM	ENSMUSG00000008090.15	ENSMUST00000112560.8	2318	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	42.3820716813135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108842133	108854790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108842399_108842760_108842985_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ENSMUST00000112563.9	chr5	+	3373	14	FSM	ENSMUSG00000033540.19	ENSMUST00000112563.9	3373	14	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_11	7.1294040681437	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCTCCCAAGTCTTC	NA	False	NA	17	True	NA	NA	NA	108816971	108832423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108817384_108817984_108818126_108827364_108827451_108827569_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829894_108829965_108830043_108830918_108831020_108831132
ENSMUST00000112568.8	chr2	+	7422	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_5	18.3464360565297	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	NA	False	NA	13	True	AATAAA	-15	NA	59442385	59676061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ENSMUST00000112570.2	chr1	+	4511	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_9	104.758039851747	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	False	NA	27	True	ATTAAA	-21	NA	127701900	127733669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUST00000112571.5	chr17	-	622	5	FSM	ENSMUSG00000024067.15	ENSMUST00000112571.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	1057.76707620345	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGAACCTTCAGGACCA	NA	False	NA	NA	False	NA	NA	NA	74623403	74606650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623214
ENSMUST00000112574.9	chrX	+	4752	7	FSM	ENSMUSG00000041649.14	ENSMUST00000112574.9	4752	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	59.2527542725981	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCATTAAAAAAAAAAAAAAC	4267	False	NA	119	True	NA	NA	NA	152020743	152179128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_152021089_152091847_152091921_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
ENSMUST00000112580.8	chr6	+	2011	5	FSM	ENSMUSG00000012396.13	ENSMUST00000112580.8	2011	5	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	1758.10842953442	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684523	122691592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122684568_122684770_122684893_122688496_122688763_122689587_122689675_122690100
ENSMUST00000112584.8	chrX	+	5900	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112584.8	5900	26	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_24	80.1180528969595	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAGAAAAAAAAAAGC	NA	False	NA	21	True	AATAAA	-31	NA	151016015	151056764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ENSMUST00000112585.8	chr6	-	2127	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112585.8	2127	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	6.10453160549186	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGTTTTTGTGTTTGT	8724	False	NA	NA	False	AGTAAA	-12	NA	122579330	122554759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
ENSMUST00000112586.8	chr6	-	2265	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112586.8	2265	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	14.3099793921613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTTGTGGTGTTTTT	8651	False	NA	NA	False	AGTAAA	-21	NA	122579403	122554750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568220_122573590_122573737_122577016_122577085_122579215
ENSMUST00000112587.11	chr6	-	2072	7	FSM	ENSMUSG00000040613.15	ENSMUST00000112587.11	2072	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	15.0185071014251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTTTGTGTTTGTGG	9984	False	NA	NA	False	AGTAAA	-14	NA	122577086	122554757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568220_122573590_122573737_122577016
ENSMUST00000112588.9	chrX	+	6449	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_24	43.2417205948144	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTTGTGTCTGCCTTC	NA	False	NA	20	True	NA	NA	NA	151016224	151057531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ENSMUST00000112598.9	chr14	+	802	3	FSM	ENSMUSG00000012405.17	ENSMUST00000112598.9	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	10327	junction_1	2922.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAATTCATATCCAA	NA	False	NA	-38	True	AATACA	-8	NA	4199069	4200696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_4199418_4199652_4199790_4200379
ENSMUST00000112599.8	chr2	-	2891	10	FSM	ENSMUSG00000026836.16	ENSMUST00000112599.8	2891	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	10.1214843004593	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTCCTTCTTTCTTTCT	NA	False	NA	2	True	AATAAA	-21	NA	58406284	58336445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58406035
ENSMUST00000112600.9	chr6	-	3127	14	FSM	ENSMUSG00000040669.15	ENSMUST00000112600.9	3127	14	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_13	317.929693392782	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACACCTACCCTAATCC	8173	False	NA	-12	True	AATAAA	-13	NA	122317520	122295262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122317503
ENSMUST00000112601.9	chr2	-	3050	12	FSM	ENSMUSG00000026836.16	ENSMUST00000112601.9	3050	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	14.1281034036818	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGATTTTCCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	58456840	58336452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58406035_58406313_58427789_58427886_58456798
ENSMUST00000112621.2	chr1	+	2338	24	FSM	ENSMUSG00000026339.19	ENSMUST00000112621.2	2338	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	17.1308761805856	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGTATTGAGCAACTGC	NA	False	NA	NA	False	AATAAA	-14	NA	121358838	121429317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389964_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ENSMUST00000112625.9	chr14	+	3434	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAATGTTGTAAGA	NA	False	NA	NA	False	TATAAA	-3	NA	6226431	6231076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_6226474_6226964_6227973_6228692
ENSMUST00000112625.9-0	chr14	+	1496	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	0	1938	0	-79	multi-exon	FALSE	canonical	3	8	junction_1	6.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATATGTCTTATATCAAT	NA	False	NA	NA	False	TATAAA	-12	NA	6226431	6229138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_6226474_6226964_6227973_6228692
ENSMUST00000112629.8	chr2	-	3422	8	FSM	ENSMUSG00000026826.14	ENSMUST00000112629.8	3422	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	1.27775312999988	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTATTTCTGGGCC	NA	False	NA	NA	False	AATAAA	-19	NA	57014015	56996841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_56998425_56998572_56998752_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57013840
ENSMUST00000112640.8	chr1	-	2752	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	6.57647321898295	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACAATAGTTAAAATTGT	NA	False	NA	-21	True	NA	NA	NA	120193014	120154152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ENSMUST00000112642.8	chr5	-	5849	18	FSM	ENSMUSG00000011831.17	ENSMUST00000112642.8	5849	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	51.109151125016	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108022973	107892660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108022854
ENSMUST00000112643.2	chr1	-	2873	6	FSM	ENSMUSG00000026389.17	ENSMUST00000112643.2	2873	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	20.5270553173123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGGGACCCTTTTCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	120200435	120154382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197854_120197990_120200166
ENSMUST00000112644.9	chr1	+	488	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	7.2773621594641	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTGATTTATCTCTA	NA	False	NA	15	True	AATAAA	-16	NA	120048924	120115919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
ENSMUST00000112674.8	chr17	+	3743	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	58	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTTGTATTTGTGTT	NA	False	NA	NA	False	AAAACA	-43	NA	69690044	69697745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_69690265_69692415_69692500_69694306
ENSMUST00000112676.4	chr17	+	4358	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	80	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATAGGCTATCTTTCCA	NA	False	NA	NA	False	AAGAAA	-13	NA	69690834	69698194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_69691221_69692415_69692500_69694306
ENSMUST00000112676.4-0	chr17	+	3352	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	0	1006	0	-557	multi-exon	FALSE	canonical	3	41	junction_1	80	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCTGTACTAACATCTG	NA	False	NA	10	True	ATTAAA	-17	NA	69690834	69697188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_69691221_69692415_69692500_69694306
ENSMUST00000112683.9	chrX	-	3796	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCATTTTCCTTGTTTCA	NA	False	NA	-1	True	AAAAAG	-18	NA	149879539	149870089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUST00000112683.9-0	chrX	-	1409	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	0	2387	0	0	multi-exon	FALSE	canonical	3	302	junction_1	26.3201443765037	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	-3	True	AATAAA	-21	NA	149879539	149872476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUST00000112686.8	chr6	+	9212	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGCTTTCGTGTATGTG	NA	False	NA	4	True	TATAAA	-17	NA	120643381	120748151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ENSMUST00000112686.8-0	chr6	+	5867	19	FSM	ENSMUSG00000071226.12	ENSMUST00000112686.8	9212	19	-52	3397	0	889	multi-exon	FALSE	canonical	3	53	junction_14	26.8930781860498	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAGTTTCAAGTCTTTG	NA	False	NA	-4	True	AATAAA	-14	NA	120643329	120744754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
ENSMUST00000112691.9	chrX	-	4869	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_8	38.4461528201024	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800318	149766136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ENSMUST00000112694.6	chr5	-	1765	3	FSM	ENSMUSG00000049606.17	ENSMUST00000112694.6	1765	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTACGGTGCAGGTGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	106772256	106764938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_106766295_106767405_106767509_106771950
ENSMUST00000112695.4	chr5	-	1915	4	FSM	ENSMUSG00000049606.17	ENSMUST00000112695.4	1915	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	43.2897216438267	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTGCCTCTAATGTGA	NA	False	NA	-19	True	AATAAA	-14	NA	106844463	106764609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_106766295_106767405_106767509_106814650_106814712_106844397
ENSMUST00000112696.8	chr5	-	5785	6	FSM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	33.3742415644161	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTCTAATGTGAAACAT	NA	False	NA	-14	True	AATAAA	-19	NA	106844696	106764604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
ENSMUST00000112697.10	chrX	-	1851	11	FSM	ENSMUSG00000025268.16	ENSMUST00000112697.10	1851	11	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_8	18.9063481402411	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACAGGTATCTGTCATGG	NA	False	NA	NA	False	NA	NA	NA	149595711	149589712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
ENSMUST00000112700.8	chrX	-	2107	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_12	38.0929965858409	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGCCATTTTTGTTT	NA	False	NA	0	True	NA	NA	NA	149596703	149589416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ENSMUST00000112703.8	chr6	-	2504	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	95	-712	0	0	multi-exon	FALSE	canonical	3	197	junction_10	38.004349468349	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334338	120301283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ENSMUST00000112707.3	chr5	+	6726	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	5.11737237261468	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTGGCCTTGTTTTTG	3368	False	NA	13	True	AATAAA	-26	NA	105563640	105637940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ENSMUST00000112712.10	chr2	+	3495	5	FSM	ENSMUSG00000050447.16	ENSMUST00000112712.10	3495	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.73205080756888	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCCTGCGAGTGTGTA	NA	False	NA	NA	False	AATAAA	-24	NA	49956440	50083581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_49956597_50055480_50055670_50063612_50063712_50078722_50078854_50080661
ENSMUST00000112721.10	chrX	-	1852	6	FSM	ENSMUSG00000025269.17	ENSMUST00000112721.10	1852	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	32.5662401882686	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGTTGAGTGGATAT	NA	False	NA	-4	True	AATAAA	-21	NA	149371092	149354503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369063_149370038_149370123_149370918
ENSMUST00000112740.2	chrX	+	2026	7	FSM	ENSMUSG00000095082.2	ENSMUST00000112740.2	2026	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	4.07226390762354	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	148724650	148767978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_148724743_148744867_148744994_148745713_148745794_148749452_148750412_148759566_148759649_148760454_148760505_148767341
ENSMUST00000112741.4	chrX	+	1953	7	FSM	ENSMUSG00000094378.8	ENSMUST00000112741.4	1953	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.27309733985213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTTGTGTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	148573186	148609690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_148573203_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
ENSMUST00000112747.2	chr5	+	1507	6	FSM	ENSMUSG00000029304.15	ENSMUST00000112747.2	1507	6	0	0	0	0	multi-exon	FALSE	canonical	3	5474	junction_2	333.11595578717	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAAGGAGTCTGGTGGT	NA	False	NA	24	True	AATAAA	-11	NA	104584057	104588909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000112748.8	chr5	+	1456	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_1	2050.93187491822	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582986	104588913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUST00000112767.9	chr14	-	998	5	FSM	ENSMUSG00000079378.9	ENSMUST00000112767.9	998	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.3923048454133	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	17338254	17329813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_17330140_17335216_17335401_17336076_17336209_17337163_17337327_17338061
ENSMUST00000112777.9	chr6	+	1868	9	FSM	ENSMUSG00000041477.15	ENSMUST00000112777.9	3313	9	35	1410	0	0	multi-exon	FALSE	canonical	3	31	junction_6	11.8684192291981	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152248	119197167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194763_119194941_119196963
ENSMUST00000112796.2	chrX	+	2028	7	FSM	ENSMUSG00000072930.4	ENSMUST00000112796.2	2028	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	7.43303437365925	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGTTTGTGTGTGTG	1209	False	NA	NA	False	AATAAA	-19	NA	146963719	147007706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_146963812_146980956_146981083_146981801_146981882_146985542_146986502_146999377_146999460_147000265_147000316_147007067
ENSMUST00000112814.8	chrX	+	2027	7	FSM	ENSMUSG00000095872.8	ENSMUST00000112814.8	2027	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	6.51707159867238	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGTTTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	146548986	146616452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_146549079_146589721_146589848_146590566_146590647_146594315_146595275_146608125_146608208_146609013_146609064_146615814
ENSMUST00000112830.3	chr6	-	6930	34	FSM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_21	12.4668891127898	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539187	118478268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ENSMUST00000112844.10	chr1	+	2046	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	7.99744857273052	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAAACTTTATCTGTGA	NA	False	NA	NA	False	AATAAA	-26	NA	97697896	97720694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ENSMUST00000112862.7	chr2	+	1339	4	FSM	ENSMUSG00000026755.15	ENSMUST00000112862.7	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	449.53704580997	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCTTCAAAAGTCATC	NA	False	NA	8	True	AATAAA	-19	NA	38898087	38905889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_38898357_38903126_38903200_38903734_38903912_38905069
ENSMUST00000112862.7-0	chr2	+	985	4	FSM	ENSMUSG00000026755.15	ENSMUST00000112862.7	1339	4	65	289	0	195	multi-exon	FALSE	canonical	0	0	junction_1	449.53704580997	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCATCGCGGTGTGTTCT	NA	False	NA	17	True	AATAAA	-19	NA	38898152	38905600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_38898357_38903126_38903200_38903734_38903912_38905069
ENSMUST00000112874.4	chr9	-	1513	3	FSM	ENSMUSG00000032475.16	ENSMUST00000112874.4	1513	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATATTGCATCTGT	NA	False	NA	-40	True	AATAAA	-18	NA	100388909	100377055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_100377725_100379310_100380024_100388778
ENSMUST00000112880.8	chr6	-	2523	2	FSM	ENSMUSG00000059878.13	ENSMUST00000112880.8	2523	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGGGAAATTGTTTGCA	NA	False	NA	13	True	AATAAA	-36	NA	116605662	116601864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_116604095_116605369
ENSMUST00000112881.8	chr1	+	3459	10	FSM	ENSMUSG00000073609.10	ENSMUST00000112881.8	3459	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	13.9761701954911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTCCACACATTTAGT	NA	False	NA	NA	False	CATAAA	-27	NA	93752995	93780070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93753303_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ENSMUST00000112890.3	chr1	-	1055	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	0	0	0	0	multi-exon	FALSE	canonical	3	2511	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCCGGCTTGTTTTGTTT	2338	False	NA	NA	False	NA	NA	NA	93729628	93727786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93728633_93729419
ENSMUST00000112893.2	chr1	-	1040	3	FSM	ENSMUSG00000026281.16	ENSMUST00000112893.2	1040	3	0	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_2	100	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCTCTCATAACCTGAG	5243	False	NA	NA	False	NA	NA	NA	93726723	93720445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93720666_93722447_93722646_93726101
ENSMUST00000112895.8	chr2	+	2264	10	FSM	ENSMUSG00000026749.12	ENSMUST00000112895.8	1513	10	66	-817	66	817	multi-exon	FALSE	canonical	1	1	junction_1	94.3328752769929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGAATTTTGTTC	NA	False	NA	28	True	TATAAA	-32	NA	38401891	38476595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_38401992_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ENSMUST00000112896.9	chrX	+	5224	7	FSM	ENSMUSG00000047045.18	ENSMUST00000112896.9	5224	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	44.5474154381848	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTAGCATTTTGAATC	NA	False	NA	8	True	AATAAA	-15	NA	141464721	141621234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_141464936_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ENSMUST00000112898.8	chr5	+	460	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	755.69086768334	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAACTAATTTGAGTGGA	NA	False	NA	41	True	AATAAA	-23	NA	100946602	100952327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100951835_100951896_100952197
ENSMUST00000112903.8	chrX	-	4956	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112903.8	4956	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	45.3617557959223	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141173500	141100988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134612_141143382_141143433_141173300
ENSMUST00000112904.8	chrX	-	4959	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	37.5140862432589	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141173500	141100988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ENSMUST00000112907.8	chrX	-	5137	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	46.2267839629317	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTTGTTTTTTCTTAT	NA	False	NA	-3	True	AATAAA	-18	NA	141173340	141100988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143481_141173300
ENSMUST00000112911.9	chr9	+	803	6	FSM	ENSMUSG00000032463.11	ENSMUST00000112911.9	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	126.927695953247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGATGGCTGTGGTAATTA	3545	False	NA	NA	False	NA	NA	NA	98868426	98883802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98868566_98872967_98873025_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ENSMUST00000112911.9-0	chr9	+	1048	6	FSM	ENSMUSG00000032463.11	ENSMUST00000112911.9	803	6	27	-272	0	0	multi-exon	FALSE	canonical	3	19	junction_1	126.927695953247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGGTTTGGTTTCATG	3572	False	NA	9	True	AATAAA	-23	NA	98868453	98884074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98868566_98872967_98873025_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ENSMUST00000112914.8	chrX	+	2484	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_3	9.93310961716756	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	11	True	AATAAA	-22	NA	141011172	141022688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
ENSMUST00000112916.9	chrX	+	2532	5	FSM	ENSMUSG00000042271.14	ENSMUST00000112916.9	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	39.4865483424419	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	11	True	AATAAA	-22	NA	141009765	141022688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_141009928_141011286_141011378_141012519_141012607_141019779_141019925_141020641
ENSMUST00000112920.2	chr2	+	4847	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	33.7498088883478	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATGTTTGCATAT	NA	False	NA	24	True	ATTAAA	-35	NA	37342278	37456466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ENSMUST00000112923.7	chr6	+	3765	30	FSM	ENSMUSG00000030323.14	ENSMUST00000112923.7	3765	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	14.4972833569763	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCTCTGGGACCACGG	NA	False	NA	NA	False	NA	NA	NA	115830595	115903291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115859607_115859785_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ENSMUST00000112925.8	chr6	+	4122	29	FSM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	9.69483346522091	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCGTTTTAGCAAATC	NA	False	NA	10	True	AATAAA	-22	NA	115830430	115903660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ENSMUST00000112934.8	chr2	-	8948	22	FSM	ENSMUSG00000075376.11	ENSMUST00000112934.8	8948	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	12.7563953992798	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTCTTAGTGTCAAT	NA	False	NA	0	True	AATAAA	-21	NA	37312915	37260080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37265441_37266672_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527_37304825_37309443_37309480_37312778
ENSMUST00000112939.10	chr5	-	1670	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	0	0	0	0	multi-exon	FALSE	canonical	3	1800	junction_7	925.260845736521	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCTTTTATCATCAGA	NA	False	NA	NA	False	AATAAA	-21	NA	100126776	100108856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ENSMUST00000112940.8	chr2	-	3056	4	FSM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	79.6366749682582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATATTTAAAAGCCA	NA	False	NA	-19	True	AATAAA	-10	NA	37249265	37240599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363
ENSMUST00000112944.8	chr1	-	1119	4	FSM	ENSMUSG00000026273.14	ENSMUST00000112944.8	3097	4	-16	1994	0	0	multi-exon	FALSE	canonical	3	13	junction_1	30.4448499567478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGAGTCTTTTTCTCT	NA	False	NA	1	True	AATAAA	-39	NA	93233601	93228926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93229307_93230439_93230625_93232329_93232829_93233546
ENSMUST00000112949.8	chr6	-	2946	17	FSM	ENSMUSG00000000441.18	ENSMUST00000112949.8	2946	17	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_16	182.118597605379	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGCAGTTTCTTGT	8815	False	NA	0	True	AATAAA	-43	NA	115652925	115595529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115652649
ENSMUST00000112969.10	chr5	-	2257	7	FSM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	65.5709962983296	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCATCCTCTTGTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	97259432	97234838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_97236024_97243770_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ENSMUST00000112971.2	chrX	+	1645	13	FSM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	38	519	0	296	multi-exon	FALSE	canonical	2	18	junction_1	12.4707992259251	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCTTGTTAAATTAT	NA	False	NA	NA	False	AATAAA	-43	NA	139857693	139946747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ENSMUST00000112974.6	chr5	+	3244	14	FSM	ENSMUSG00000034663.14	ENSMUST00000112974.6	3244	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	5.94053371578702	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTGTATGGTATTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	97145547	97217508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257
ENSMUST00000112978.2	chrX	-	1390	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	228.562218006389	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCCCAATTTCTCATTC	NA	False	NA	-8	True	AATAAA	-11	NA	139857477	139849177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
ENSMUST00000112995.3	chrX	-	1790	3	FSM	ENSMUSG00000031431.14	ENSMUST00000112995.3	1790	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	112.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGTGAGTGCATAA	NA	False	NA	NA	False	AATAAA	-26	NA	139443417	139440276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_139441857_139442853_139442906_139443259
ENSMUST00000112996.9	chrX	-	1552	4	FSM	ENSMUSG00000031431.14	ENSMUST00000112996.9	1552	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	117.12196871448	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATCGTTTTTCTATA	NA	False	NA	NA	False	TATAAA	-17	NA	139501408	139441010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_139441857_139442853_139442906_139498876_139499308_139501185
ENSMUST00000113001.9	chr2	-	3340	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113001.9	3340	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	33.733045628092	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTCTGGTCTGGTATGG	NA	False	NA	-3	True	AATAAA	-13	NA	35351261	35290194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ENSMUST00000113002.9	chr2	-	3391	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	27.2381784880513	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTCTGGTATGGATTA	NA	False	NA	1	True	AATAAA	-17	NA	35351278	35290190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ENSMUST00000113007.8	chrX	-	3691	8	FSM	ENSMUSG00000031433.16	ENSMUST00000113007.8	3691	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	13.2849462143573	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGGAAAATAATAGCAAAC	NA	False	NA	NA	False	AAGAAA	-37	NA	138899291	138844153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_138846653_138855655_138855804_138868944_138869349_138894046_138894252_138894660_138894854_138895860_138895978_138897413_138897496_138899248
ENSMUST00000113011.9	chrX	-	3728	8	FSM	ENSMUSG00000031433.16	ENSMUST00000113011.9	3728	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	12.2291054623044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAGGGGAAAACAT	NA	False	NA	NA	False	NA	NA	NA	138899306	138844121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_138846653_138855655_138855804_138868944_138869349_138892264_138892337_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ENSMUST00000113026.2	chrX	+	2750	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	9.49853789918334	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGTTCGATTTAGCTC	NA	False	NA	NA	False	AATAAA	-22	NA	138511368	138573894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUST00000113028.2	chr9	-	3950	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	1.5	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCTACTCTGTCTTCA	NA	False	NA	-1	True	AATAAA	-20	NA	94420134	94399916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_94402700_94406444_94406749_94419271
ENSMUST00000113032.8	chr2	+	7085	44	FSM	ENSMUSG00000057110.16	ENSMUST00000113032.8	7085	44	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_18	32.6476841716826	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGCCATGTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	34999630	35068434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ENSMUST00000113035.8	chr17	+	3402	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	590.514232338011	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1412	False	NA	36	True	AATAAA	-20	NA	56611312	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000113038.8	chr17	+	3483	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_6	505.023262923353	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	499	False	NA	36	True	AATAAA	-20	NA	56610399	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000113039.9	chr17	+	3391	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	450.210766613816	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUST00000113042.3	chrX	+	4182	4	FSM	ENSMUSG00000042515.14	ENSMUST00000113042.3	4182	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.29983164553722	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGTATTATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	138117914	138139084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_138117964_138132034_138132164_138134427_138134595_138135247
ENSMUST00000113051.9	chr5	+	6435	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113051.9	6435	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	24.0066863114075	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGTCAAATTGAATATGGA	NA	False	NA	7	True	AATGAA	-12	NA	93045851	93113167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_93046080_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ENSMUST00000113054.9	chr5	+	6401	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113054.9	6401	10	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	38.4967531098403	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATGGAGATTTTTGCG	2180	False	NA	17	True	AATGAA	-22	NA	92957236	93113177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_92957421_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ENSMUST00000113055.9	chr5	+	6765	11	FSM	ENSMUSG00000029381.17	ENSMUST00000113055.9	6765	11	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	46.2640249005639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAATATGGAGATTTT	5380	False	NA	13	True	AATGAA	-18	NA	92831293	93113173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_92831691_92928611_92928767_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ENSMUST00000113066.9	chrX	-	1692	4	FSM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTTGAGAGTTATA	NA	False	NA	-1	True	AATAAA	-18	NA	136020920	136016145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319
ENSMUST00000113066.9-0	chrX	-	1333	4	FSM	ENSMUSG00000023443.14	ENSMUST00000113066.9	1692	4	359	0	359	0	multi-exon	FALSE	canonical	3	42	junction_3	6.23609564462324	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGCTTTGAGAGTTATA	NA	False	NA	-1	True	AATAAA	-18	NA	136020561	136016145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_136016755_136018006_136018053_136019115_136019552_136020319
ENSMUST00000113071.2	chrX	-	439	3	FSM	ENSMUSG00000089768.3	ENSMUST00000113071.2	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	50	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135877623	135874770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135874989_135876146_135876252_135877507
ENSMUST00000113078.8	chr2	-	1872	6	FSM	ENSMUSG00000035949.16	ENSMUST00000113078.8	1872	6	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	77.1403914949879	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTTCTTTGAAATTG	NA	False	NA	-3	True	ATTAAA	-15	NA	34713193	34695349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569
ENSMUST00000113080.9	chr2	-	1923	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_7	72.0294724259395	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCTTTGTTCTTTGAAA	9201	False	NA	-6	True	ATTAAA	-12	NA	34716242	34695352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ENSMUST00000113085.2	chrX	+	2540	7	FSM	ENSMUSG00000031425.16	ENSMUST00000113085.2	2540	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	2.35702260395516	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	135723538	135738547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135723667_135731819_135732007_135732701_135732859_135734016_135734186_135734903_135734978_135735847_135735914_135736788
ENSMUST00000113097.8	chrX	-	1825	4	FSM	ENSMUSG00000031422.17	ENSMUST00000113097.8	1825	4	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	1449.75867723639	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTTCTTTTTATG	NA	False	NA	NA	False	AATAAA	-34	NA	135644439	135633690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135644341
ENSMUST00000113099.10	chr2	-	5758	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	0	0	0	0	multi-exon	FALSE	canonical	2	81	junction_18	31.5772069695849	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	5780	False	NA	NA	False	NA	NA	NA	34644573	34566996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ENSMUST00000113102.10	chr5	-	2414	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	5.44885309033011	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGTCTGAGTGTCCTAC	9198	False	NA	-1	True	NA	NA	NA	92426029	92405517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
ENSMUST00000113110.5	chr9	-	801	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_2	104	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATCAATAGAAATTATT	NA	False	NA	NA	False	AATAAA	-20	NA	88601866	88570654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88571039_88597540_88597803_88601711
ENSMUST00000113111.8	chr2	-	4543	19	FSM	ENSMUSG00000026867.20	ENSMUST00000113111.8	4543	19	0	0	0	0	multi-exon	FALSE	canonical	2	81	junction_18	35.8003724375413	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTGCAGGGCTCTTTT	NA	False	NA	-7	True	AATAAA	-15	NA	34607309	34566195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264
ENSMUST00000113112.2	chrX	+	826	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	2270	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCCACAAGAACTCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	135171053	135172713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135171151_135171558_135171632_135172057
ENSMUST00000113113.2	chrX	+	766	2	FSM	ENSMUSG00000046432.13	ENSMUST00000113113.2	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	4289	junction_1	0	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGTGTCCTTAAAGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	135171523	135172669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135171632_135172011
ENSMUST00000113115.2	chrX	+	888	2	FSM	ENSMUSG00000042712.11	ENSMUST00000113115.2	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	2732	junction_1	0	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAGCCCATCAATTTA	NA	False	NA	8	True	AATAAA	-24	NA	135146431	135147888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135146516_135147084
ENSMUST00000113117.4	chr6	+	4540	13	FSM	ENSMUSG00000001632.17	ENSMUST00000113117.4	4540	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	40.0779622181013	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTCTATTTAGAATTCT	319	False	NA	9	True	AATATA	-16	NA	113284184	113301802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ENSMUST00000113118.2	chrX	-	754	3	FSM	ENSMUSG00000050071.9	ENSMUST00000113118.2	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	2702.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACCTATTGTGAACCTA	NA	False	NA	-43	True	NA	NA	NA	135116233	135114761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135115333_135115694_135115730_135116085
ENSMUST00000113119.8	chr6	+	4826	13	FSM	ENSMUSG00000001632.17	ENSMUST00000113119.8	4826	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	46.1317557533733	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	287	False	NA	28	True	AATAAA	-16	NA	113284152	113301821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ENSMUST00000113120.2	chrX	-	718	2	FSM	ENSMUSG00000050071.9	ENSMUST00000113120.2	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCTGTACTCATCTTTT	NA	False	NA	-3	True	AATAAA	-16	NA	135116192	135114721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135115333_135116085
ENSMUST00000113121.8	chr6	+	4603	14	FSM	ENSMUSG00000001632.17	ENSMUST00000113121.8	4603	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	53.3804032920444	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAGAATGGAG	287	False	NA	NA	False	NA	NA	NA	113284152	113301682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUST00000113122.8	chr6	+	4773	14	FSM	ENSMUSG00000001632.17	ENSMUST00000113122.8	4773	14	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	28.9253272447006	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCTTCTTGCCTTCTA	232	False	NA	25	True	AATAAA	-13	NA	113284097	113301818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUST00000113126.3	chr2	+	3018	11	FSM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	17.1767284428671	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34322036	34514962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUST00000113127.7	chr5	-	4182	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1117	junction_4	208.26764030929	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231578	92200022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUST00000113132.9	chr2	-	2734	8	FSM	ENSMUSG00000038718.16	ENSMUST00000113132.9	2734	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	11.7577590534584	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATGTGTGTCTCTGT	838	False	NA	NA	False	AATAAA	-24	NA	34262050	34061468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34062986_34065876_34065967_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
ENSMUST00000113136.8	chrX	+	3736	7	FSM	ENSMUSG00000072966.12	ENSMUST00000113136.8	3736	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.6669207311169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	134739804	134745475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134739998_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ENSMUST00000113146.9	chr6	+	2676	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	0	0	0	0	multi-exon	TRUE	canonical	3	298	junction_17	28.028204489649	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCAGTCCCCATCAG	1968	False	NA	NA	False	NA	NA	NA	113214803	113258353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ENSMUST00000113158.8	chr2	-	6602	3	FSM	ENSMUSG00000068966.11	ENSMUST00000113158.8	6602	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGGTCTCTGTGTT	NA	False	NA	0	True	AATAAA	-18	NA	33321336	33296119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33302508_33318112_33318233_33321242
ENSMUST00000113161.10	chr19	+	2158	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	72	2916	0	0	multi-exon	FALSE	canonical	3	20	junction_4	9.36897954837013	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGGCAGTGGCCTTCAC	4039	False	NA	8	True	AATAAA	-23	NA	9995628	10012825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUST00000113172.8	chrX	+	3677	5	FSM	ENSMUSG00000096508.8	ENSMUST00000113172.8	3677	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	40.2336923485777	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTACTAAAATTTAAGT	NA	False	NA	NA	False	NA	NA	NA	134334583	134344579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134334711_134334908_134335036_134339279_134339580_134340880_134341466_134342041
ENSMUST00000113173.8	chrX	+	3677	5	FSM	ENSMUSG00000094004.8	ENSMUST00000113173.8	3677	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	39.7955713616478	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTACTAAAATTTAAGT	NA	False	NA	NA	False	NA	NA	NA	134274032	134283975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134274160_134274357_134274485_134278675_134278976_134280276_134280862_134281437
ENSMUST00000113176.3	chrX	+	3673	5	FSM	ENSMUSG00000067360.13	ENSMUST00000113176.3	3673	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTACTATAATTTAAGT	NA	False	NA	NA	False	NA	NA	NA	134203064	134213385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
ENSMUST00000113183.2	chrX	-	3698	5	FSM	ENSMUSG00000079432.2	ENSMUST00000113183.2	3698	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	56.4933624419719	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134078381	134068372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_134070935_134071511_134072097_134073399_134073700_134077932_134078052_134078249
ENSMUST00000113186.8	chr1	+	3004	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_8	19.4867743610891	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	7308	False	NA	17	True	AATAAA	-26	NA	87683797	87720144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUST00000113189.8	chrX	-	2375	22	FSM	ENSMUSG00000009941.11	ENSMUST00000113189.8	2375	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	7.21770310384392	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATGTCTTGAAGTGCT	NA	False	NA	-2	True	AATAAA	-18	NA	133865503	133845276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133845538_133845640_133845702_133850435_133850616_133851095_133851169_133851717_133851761_133851850_133851967_133852078_133852138_133852238_133852347_133852497_133852554_133852635_133852891_133853240_133853278_133855976_133856087_133856257_133856366_133856471_133856561_133856713_133856784_133856913_133856995_133857111_133857217_133857340_133857425_133857798_133857953_133858216_133858320_133862672_133862768_133865376
ENSMUST00000113195.8	chr17	-	2385	8	FSM	ENSMUSG00000039316.15	ENSMUST00000113195.8	2385	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	34.3261666121592	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGGTGAGAAGTATT	NA	False	NA	-28	True	AATAAA	-13	NA	50401360	50300287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50401203
ENSMUST00000113197.2	chrX	+	2179	5	FSM	ENSMUSG00000033460.15	ENSMUST00000113197.2	2179	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	75.7310207246674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTCTTTGTCCTTGGG	NA	False	NA	NA	False	AATAAA	-27	NA	133618768	133622666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133618800_133619118_133619211_133619668_133619742_133620375_133620475_133620782
ENSMUST00000113198.8	chrX	+	2085	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	26.0895892391327	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGCACTGTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	133618761	133622657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
ENSMUST00000113200.8	chr2	-	4030	26	FSM	ENSMUSG00000026792.17	ENSMUST00000113200.8	4030	26	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	3.74165738677394	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTACACAGTTTGCATAGA	NA	False	NA	-5	True	AATAAA	-21	NA	32851626	32815231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055_32851268_32851573
ENSMUST00000113201.8	chrX	+	2228	5	FSM	ENSMUSG00000033460.15	ENSMUST00000113201.8	2228	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	55.9955355363265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAAGCACTGTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	133618711	133622657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620782
ENSMUST00000113202.8	chrX	+	3988	3	FSM	ENSMUSG00000045427.14	ENSMUST00000113202.8	3988	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	354.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATATATATAGGA	NA	False	NA	NA	False	AATACA	-42	NA	133502006	133507507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133502083_133503440_133503512_133503666
ENSMUST00000113211.8	chrX	+	483	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	10431	junction_4	1336.12412877696	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAAGTTTTTCTCCTGTT	NA	False	NA	75	True	ATTAAA	-16	NA	133486402	133488805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
ENSMUST00000113215.10	chr9	+	4565	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTTATTTTTCCTTC	NA	False	NA	9	True	AATAAA	-16	NA	83430380	83483399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ENSMUST00000113215.10-0	chr9	+	3510	4	FSM	ENSMUSG00000032261.17	ENSMUST00000113215.10	4565	4	1	1054	0	-1054	multi-exon	FALSE	canonical	3	104	junction_2	12.4988888395018	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGTTGTTTCTTCCCA	NA	False	NA	NA	False	AATAAA	-24	NA	83430381	83482345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_83430557_83459488_83459675_83476710_83476792_83479277
ENSMUST00000113230.8	chr1	+	1569	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113230.8	1569	6	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_1	501.781067797501	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGACCCCACCTTTGC	NA	False	NA	NA	False	AATAAA	-16	NA	87141660	87154322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
ENSMUST00000113231.4	chr1	+	1119	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_1	458.210801802935	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCATGCTCTTGCTC	NA	False	NA	15	True	AATAAA	-15	NA	87142007	87155786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUST00000113232.8	chr1	+	1125	6	FSM	ENSMUSG00000026254.18	ENSMUST00000113232.8	1125	6	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_1	545.938677875089	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCACCTTTGCATGTCTG	NA	False	NA	NA	False	AATAAA	-23	NA	87141635	87154329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818
ENSMUST00000113233.8	chr1	+	950	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	65	792	0	0	multi-exon	FALSE	canonical	3	965	junction_1	498.771713534581	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCATGCTCTTGCTC	NA	False	NA	15	True	AATAAA	-15	NA	87141700	87155786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUST00000113234.8	chr5	-	2286	10	FSM	ENSMUSG00000044221.15	ENSMUST00000113234.8	2286	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	165.873073593064	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCAAAGTTCTGTATA	NA	False	NA	-8	True	AATAAA	-26	NA	88823525	88807316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823353
ENSMUST00000113235.8	chr1	+	3473	8	FSM	ENSMUSG00000026254.18	ENSMUST00000113235.8	3473	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	1022.13094732005	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGAGTCTCCTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	87141635	87168210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
ENSMUST00000113239.10	chr6	-	2084	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	22.0871003076456	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCCTTAATGTCATT	NA	False	NA	-33	True	AATAAA	-17	NA	106777035	106757161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ENSMUST00000113242.5	chr2	+	3107	11	FSM	ENSMUSG00000059013.13	ENSMUST00000113242.5	3107	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	3.98622628559895	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCTTTAAACTGG	1545	False	NA	NA	False	NA	NA	NA	32617717	32645524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32617819_32627530_32627571_32634762_32634892_32635846_32636302_32637033_32637159_32639164_32639698_32640963_32641080_32641525_32641698_32642625_32642738_32643000_32643208_32644407
ENSMUST00000113245.9-1	chr9	+	1698	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	460	0	194	0	multi-exon	TRUE	canonical	3	114	junction_3	13.589211407093	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCGATGTTGATCTCTG	NA	False	NA	4	True	NA	NA	NA	82712052	82729740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
ENSMUST00000113248.4	chr6	+	2218	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	0	-820	0	0	multi-exon	FALSE	canonical	3	228	junction_1	232.818296907696	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746126	106759435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_106746153_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUST00000113249.8	chr6	+	2192	9	FSM	ENSMUSG00000013736.17	ENSMUST00000113249.8	1614	9	25	-603	0	0	multi-exon	FALSE	canonical	1	13	junction_1	300.377991037959	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746126	106759435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_106746153_106746816_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUST00000113252.8	chrX	-	3128	14	FSM	ENSMUSG00000067369.13	ENSMUST00000113252.8	3128	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_12	15.8476474277441	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTCACTATCTCTAGT	NA	False	NA	-10	True	AATAAA	-18	NA	133177669	133123848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133171258_133171335_133177594
ENSMUST00000113262.2	chr17	-	3198	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113262.2	3198	17	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_11	19.4871752699051	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTTTGTTGGCTTTT	NA	False	NA	-7	True	NA	NA	NA	48235401	48178692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ENSMUST00000113263.8	chr17	-	3156	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113263.8	3156	17	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	49.0595540516829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235325	48178688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186650_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191269_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ENSMUST00000113265.8	chr17	-	3999	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_11	26.5099480148491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGTGTCACCAAGG	NA	False	NA	-2	True	ATTAAA	-18	NA	48235570	48178057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ENSMUST00000113265.8-0	chr17	-	3364	17	FSM	ENSMUSG00000023991.17	ENSMUST00000113265.8	3999	17	0	635	0	0	multi-exon	FALSE	canonical	3	59	junction_11	26.5099480148491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTTTGTTGGCTTTT	NA	False	NA	-7	True	NA	NA	NA	48235570	48178692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189420_48189531_48189680_48191187_48191275_48191694_48191818_48199049_48199146_48215220_48215460_48235130
ENSMUST00000113277.8	chr2	+	2063	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	98.788775790685	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAAGTGAGTGTATTGA	NA	False	NA	13	True	AATAAA	-17	NA	32515448	32525066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUST00000113286.8	chrX	+	2717	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_8	82.5556781814552	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAAGTTTTGCTTTTTAA	NA	False	NA	4	True	AATAAA	-19	NA	132959963	132976612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ENSMUST00000113287.8	chrX	+	3661	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	147.051615138335	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCATGATCTGCCTTTA	NA	False	NA	NA	False	AATACA	-13	NA	132959935	132986795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUST00000113290.8	chr2	+	2402	6	FSM	ENSMUSG00000026811.19	ENSMUST00000113290.8	2402	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	35.6202189774291	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCAGTGTTCTGTGTCTT	3304	False	NA	5	True	AATAAA	-14	NA	32496972	32510816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUST00000113296.8	chr17	+	2144	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	11.8988794990677	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGAGTGCTCTCGTCT	NA	False	NA	NA	False	AATATA	-19	NA	48006122	48015211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
ENSMUST00000113301.2	chr17	-	594	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	2129.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	47998993	47997664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47997988_47998112_47998214_47998823
ENSMUST00000113302.10	chr17	-	749	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	3748	junction_1	369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCAAGAGACAGGCATG	NA	False	NA	82	True	AATAAA	-16	NA	47999108	47997570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47997934_47998112_47998214_47998823
ENSMUST00000113302.10-0	chr17	-	540	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	115	94	0	0	multi-exon	FALSE	canonical	3	3748	junction_1	369	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTATTTTATTCTTTT	NA	False	NA	-12	True	AATAAA	-15	NA	47998993	47997664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47997934_47998112_47998214_47998823
ENSMUST00000113306.4	chr1	+	2582	2	FSM	ENSMUSG00000079445.4	ENSMUST00000113306.4	2582	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGCTTCCTTGGTCTT	NA	False	NA	36	True	AATAAA	-27	NA	86230955	86235027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86231277_86232766
ENSMUST00000113307.9	chr2	-	2541	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113307.9	2541	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	28.5933601892744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCATTTTCAAGTTCA	9460	False	NA	NA	False	NA	NA	NA	32314017	32305071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32313805
ENSMUST00000113308.8	chr2	-	2643	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113308.8	2643	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	28.5933601892744	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATGGGAAAGTGGCTAC	2713	False	NA	NA	False	NA	NA	NA	32320764	32304981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32320540
ENSMUST00000113310.9	chr2	-	3278	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	7.53919797941661	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAATGGAGCCAGGGTTT	8153	False	NA	-9	True	AATAAA	-14	NA	32341457	32304501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
ENSMUST00000113320.3	chrX	+	8196	27	FSM	ENSMUSG00000034480.19	ENSMUST00000113320.3	8196	27	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	24.898729798167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	AATAAA	-19	NA	128650724	129366583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_128650866_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079810_129159825_129159991_129190602_129190739_129228714_129228811_129361619
ENSMUST00000113331.8	chr2	+	2604	15	FSM	ENSMUSG00000039205.17	ENSMUST00000113331.8	2604	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	14.676789950984	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCACCAGCACTGTGTC	NA	False	NA	12	True	AATAAA	-23	NA	32253816	32268315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUST00000113332.8	chr2	+	2973	18	FSM	ENSMUSG00000039205.17	ENSMUST00000113332.8	2973	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	28.4119473870634	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCACCAGCACTGTGTC	NA	False	NA	12	True	AATAAA	-23	NA	32253209	32268315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUST00000113335.4	chr17	-	5691	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113335.4	5691	47	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_37	17.7419541657098	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCTTTTCTTCCCAGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	47321458	47241174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ENSMUST00000113337.10	chr17	-	7633	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_37	23.6319046780947	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTTTTGCCTCCATCTT	NA	False	NA	-4	True	AATAAA	-17	NA	47321446	47239220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ENSMUST00000113338.9	chr2	+	2666	16	FSM	ENSMUSG00000039205.17	ENSMUST00000113338.9	2666	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	18.8985596158955	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	False	NA	7	True	AATAAA	-18	NA	32253821	32268310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUST00000113355.9	chr6	-	4913	24	FSM	ENSMUSG00000030064.17	ENSMUST00000113355.9	4913	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	23.7882911898179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTTTGGATGCTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	97594502	97263827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97389448_97389542_97398522_97398618_97400419_97400486_97505690_97505813_97594150
ENSMUST00000113359.8	chr6	-	4311	23	FSM	ENSMUSG00000030064.17	ENSMUST00000113359.8	4311	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	23.4166360302928	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGCTCCTTTGTCATT	NA	False	NA	NA	False	CATAAA	-10	NA	97436247	97264048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97300615_97300703_97302393_97302452_97305193_97305260_97306441_97306526_97330142_97330166_97330965_97331023_97373153_97373239_97389448_97389542_97398522_97398618_97400419_97400486_97436154
ENSMUST00000113360.8	chr1	+	3805	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	34.2579826463848	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATGTCCTTTAGAC	NA	False	NA	15	True	AATAAA	-16	NA	85721161	85779297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUST00000113367.2	chr9	+	2207	17	FSM	ENSMUSG00000070291.5	ENSMUST00000113367.2	2207	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	22.7904002542737	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9042	False	NA	2	True	AATAAA	-13	NA	78303058	78330869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
ENSMUST00000113369.3	chr19	+	2013	11	FSM	ENSMUSG00000024968.15	ENSMUST00000113369.3	2013	11	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_10	67.7507195533745	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTCTTCCATGTGTGCT	NA	False	NA	21	True	AATAAA	-16	NA	7247128	7252589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ENSMUST00000113373.2	chr5	-	3504	33	FSM	ENSMUSG00000035898.14	ENSMUST00000113373.2	3504	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	24.5302547568813	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTGAATTTGTACTA	7380	False	NA	NA	False	AATAAA	-14	NA	86320370	86260200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320265
ENSMUST00000113377.8	chr2	+	4361	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	19.1852443299532	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGTGTTCGTCATTGG	NA	False	NA	30	True	AATAAA	-23	NA	32178264	32197933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUST00000113388.3	chrX	-	4749	14	FSM	ENSMUSG00000025531.15	ENSMUST00000113388.3	4749	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	49.178096822677	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCACTGTAATGGCTTA	NA	False	NA	-11	True	AATAAA	-14	NA	112095214	111950291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ENSMUST00000113397.9	chr2	-	580	4	FSM	ENSMUSG00000044627.12	ENSMUST00000113397.9	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	1606.82426612938	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178017	32168827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32169144_32170720_32170816_32177608_32177658_32177897
ENSMUST00000113400.3	chr2	-	522	5	FSM	ENSMUSG00000044627.12	ENSMUST00000113400.3	522	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	1473.86522026269	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTGGGAGGGGTGGGT	NA	False	NA	-114	True	NA	NA	NA	32178081	32168929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32178042
ENSMUST00000113421.10	chr9	-	2630	14	FSM	ENSMUSG00000032352.17	ENSMUST00000113421.10	2630	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	12.8638753857781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGGGTGTTTTTACTGT	NA	False	NA	NA	False	TTTAAA	-7	NA	77451377	77338261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451305
ENSMUST00000113423.10	chr19	+	990	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	15.9234278833282	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGCCTCTATCCTTCG	9321	False	NA	10	True	AATAAA	-15	NA	6919868	6929261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
ENSMUST00000113428.9	chrX	-	4135	23	FSM	ENSMUSG00000025665.17	ENSMUST00000113428.9	4135	23	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	54.455987232393	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	-7	True	ATTAAA	-30	NA	110372892	110297889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546
ENSMUST00000113429.8	chr17	+	998	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	389.469903273097	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	False	NA	27	True	AATAAA	-16	NA	46957175	46961057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
ENSMUST00000113430.2	chr17	+	991	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	404.985047734961	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTTTCACTTGGGAGG	NA	False	NA	35	True	AATAAA	-24	NA	46957195	46961065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46957325_46958321_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ENSMUST00000113438.8	chr6	-	8016	40	FSM	ENSMUSG00000030022.15	ENSMUST00000113438.8	8016	40	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	5.38656863230259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTTCTCTTGGCTTCTG	NA	False	NA	NA	False	AATAAA	-25	NA	92920473	92749679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92800327_92800496_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355_92878461_92880668_92880811_92882134_92882282_92885457_92885564_92885678_92885720_92886669_92886786_92886886_92886971_92889603_92889894_92914227_92914391_92919027_92919429_92920021
ENSMUST00000113444.8	chr1	+	3142	12	FSM	ENSMUSG00000026159.14	ENSMUST00000113444.8	3142	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	136.075392326071	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817217	82874102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
ENSMUST00000113444.8-0	chr1	+	2450	12	FSM	ENSMUSG00000026159.14	ENSMUST00000113444.8	3142	12	-14	706	0	0	multi-exon	FALSE	canonical	3	50	junction_9	136.075392326071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTTTGTGTTCTTG	NA	False	NA	15	True	AATAAA	-15	NA	82817203	82873396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82871144_82871304_82872196_82872289_82872719
ENSMUST00000113445.2	chr6	-	3708	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTTTGGTTGTCTTT	NA	False	NA	NA	False	AGTAAA	-36	NA	92458373	92352364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
ENSMUST00000113445.2-0	chr6	-	5221	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113445.2	3708	8	0	-1513	0	1513	multi-exon	FALSE	canonical	3	6	junction_7	6.79135104228841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATGCAGCACTGTGCC	NA	False	NA	NA	False	AATAAA	-26	NA	92458373	92350851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92457805
ENSMUST00000113446.8	chr6	-	7860	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113446.8	7860	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	6.08779307218929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTGTCATTCTTCTCAG	NA	False	NA	-18	True	AATAAA	-15	NA	92511842	92347890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92511596
ENSMUST00000113446.8-0	chr6	-	4887	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113446.8	7860	8	0	2973	0	1501	multi-exon	FALSE	canonical	2	9	junction_7	6.08779307218929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTAAGAGATAAATATG	NA	False	NA	NA	False	AATAAA	-14	NA	92511842	92350863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92511596
ENSMUST00000113447.8	chr6	-	7679	8	FSM	ENSMUSG00000030020.14	ENSMUST00000113447.8	7679	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.41766849294642	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTCATTCTTCTCAGTC	NA	False	NA	-16	True	AATAAA	-17	NA	92544347	92347888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92353802_92387737_92388614_92393716_92393904_92397123_92397328_92399311_92399450_92402560_92402675_92435455_92435640_92544284
ENSMUST00000113449.2	chr5	+	6924	4	FSM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	347.74543690592	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	4401	False	NA	14	True	AATAAA	-14	NA	77414042	77434279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549
ENSMUST00000113453.9	chr5	-	1113	3	FSM	ENSMUSG00000059325.15	ENSMUST00000113453.9	1113	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGAGTCTTTTTTTTT	3143	False	NA	-3	True	ATTAAA	-20	NA	77243124	77234834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_77235664_77242712_77242870_77242997
ENSMUST00000113460.8	chr6	+	7647	15	FSM	ENSMUSG00000005893.15	ENSMUST00000113460.8	7647	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.34732309164457	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTGCTGCTCATCT	NA	False	NA	13	True	ATTAAA	-15	NA	92068370	92150038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ENSMUST00000113471.3	chr19	+	535	4	FSM	ENSMUSG00000032946.17	ENSMUST00000113471.3	535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.70761186258	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGGGTCATGTCACT	NA	False	NA	14	True	NA	NA	NA	6451731	6453668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6451894_6452501_6452605_6453053_6453117_6453461
ENSMUST00000113482.8	chr2	+	3268	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	0	0	0	0	multi-exon	TRUE	canonical	3	465	junction_18	67.3624112131124	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	493	False	NA	36	True	AATAAA	-37	NA	31462662	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUST00000113487.8	chr19	+	2649	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_12	242.538814190407	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	834	False	NA	15	True	AATAAA	-15	NA	6413951	6427226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ENSMUST00000113488.8	chr19	+	2861	14	FSM	ENSMUSG00000024949.18	ENSMUST00000113488.8	2282	14	112	-691	0	0	multi-exon	FALSE	canonical	1	12	junction_13	335.352733135279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687_6425893_6426325
ENSMUST00000113489.8	chr19	+	2863	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_10	368.940026366828	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	631	False	NA	22	True	AATAAA	-22	NA	6413748	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUST00000113495.9	chrX	-	2512	8	FSM	ENSMUSG00000047242.15	ENSMUST00000113495.9	2512	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	5.73211504221111	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTAACCTTTCATTTC	NA	False	NA	NA	False	AATAAA	-12	NA	105264764	105250488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184_105263305_105264682
ENSMUST00000113498.9	chr6	+	4644	17	FSM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	5.3370755100523	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTCTCTTTGACTTCT	NA	False	NA	NA	False	ATTAAA	-26	NA	91189436	91249521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUST00000113502.10	chr19	+	2652	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113502.10	2652	10	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	106.997403914508	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	554	False	NA	12	True	GATAAA	-12	NA	6385008	6390910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000113504.10	chr19	+	2663	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113504.10	2663	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	106.997403914508	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTATGTATGTGTTTC	554	False	NA	23	True	GATAAA	-23	NA	6385008	6390921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUST00000113509.2	chr6	-	6893	40	FSM	ENSMUSG00000030091.18	ENSMUST00000113509.2	6893	40	0	0	0	0	multi-exon	FALSE	non_canonical	2	13	junction_25	73.2448632562406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGCGGTGGTTCTTGG	NA	False	NA	-4	True	AATAAA	-18	NA	91093801	90990051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037586_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
ENSMUST00000113512.8	chr1	-	4551	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_7	59.0382982576312	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739486	79679978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUST00000113513.8	chr1	-	4551	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113513.8	4551	12	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_7	59.9757526763184	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739486	79679978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79699930_79699986_79711516_79711591_79717778_79717847_79739280
ENSMUST00000113514.8	chr1	-	4551	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113514.8	4551	12	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_7	61.8239302140153	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739486	79679978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUST00000113515.8	chr1	-	4551	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113515.8	4551	12	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_7	60.8834410035254	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTAATTTTGTTTGCT	NA	False	NA	0	True	AATAAA	-23	NA	79739486	79679978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79694919_79695033_79696840_79696992_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUST00000113523.9	chr17	-	3284	24	FSM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_20	27.310993375713	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTGGCAGTCCCTC	NA	False	NA	-6	True	AATAAA	-20	NA	45997185	45971096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ENSMUST00000113528.2	chr19	+	1562	11	FSM	ENSMUSG00000024786.10	ENSMUST00000113528.2	1562	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3.41906419945575	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTGCCCTGAGGTTTA	8117	False	NA	10	True	AATAAA	-26	NA	6234496	6274255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6234613_6245693_6245811_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
ENSMUST00000113533.3	chr19	-	1442	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAGGAACTTTTAGAC	NA	False	NA	-9	True	AATAAA	-25	NA	6168680	6166029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6166618_6167826
ENSMUST00000113535.9	chr5	+	1969	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_11	150.805393360671	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696141	74756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUST00000113536.8	chr5	+	4769	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCATTACCCTGACTGC	NA	False	NA	23	True	AATAAA	-32	NA	74696131	74759461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUST00000113536.8-0	chr5	+	2082	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	32	2655	0	0	multi-exon	FALSE	canonical	3	259	junction_9	161.909389842069	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696163	74756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUST00000113539.8	chr6	+	4864	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACTACATGCAAGCCAAC	NA	False	NA	NA	False	AATAAA	-28	NA	90346473	90362066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
ENSMUST00000113539.8-1	chr6	+	2881	6	FSM	ENSMUSG00000034430.17	ENSMUST00000113539.8	4864	6	2	1981	0	0	multi-exon	FALSE	canonical	3	93	junction_4	6.06630035524124	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGAGAGAGTCTGACTT	NA	False	NA	NA	False	NA	NA	NA	90346475	90360085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813
ENSMUST00000113550.6	chr6	-	1042	7	FSM	ENSMUSG00000030086.17	ENSMUST00000113550.6	1042	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	87.7648373021147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCACTTCTGTTGAC	NA	False	NA	0	True	AATAAA	-37	NA	89572634	89360127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUST00000113552.9	chr2	-	1910	9	FSM	ENSMUSG00000075415.14	ENSMUST00000113552.9	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	13.559475469206	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTTTTGTGTCTTCTT	4837	False	NA	-13	True	NA	NA	NA	31031951	30943246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUST00000113553.2	chr1	+	4153	24	FSM	ENSMUSG00000026213.16	ENSMUST00000113553.2	4153	24	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	9.28136128468159	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTGACTCTGGAAGT	2763	False	NA	15	True	AATAAA	-14	NA	75498195	75513576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ENSMUST00000113557.8	chrX	+	4900	23	FSM	ENSMUSG00000033792.13	ENSMUST00000113557.8	4900	23	0	0	0	0	multi-exon	TRUE	canonical	2	41	junction_4	12.997138909572	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	105070881	105168523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ENSMUST00000113558.8	chr5	+	4023	10	FSM	ENSMUSG00000051674.16	ENSMUST00000113558.8	4023	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	47.4083911934961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	NA	False	NA	19	True	AATAAA	-30	NA	73648367	73718137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73714596_73714700_73714974
ENSMUST00000113560.8	chr2	-	4726	17	FSM	ENSMUSG00000075415.14	ENSMUST00000113560.8	4726	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	52.6539409731124	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTTCTCTGTTGTATG	4768	False	NA	-6	True	AATAAA	-17	NA	31032020	30916218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30934893_30934909_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUST00000113565.3	chr1	-	3379	9	FSM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	8.70254991367473	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATGGTAAATAAGTTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	75483005	75472979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ENSMUST00000113573.8	chrX	-	10275	35	FSM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_34	46.470253163349	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104973009	104841220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ENSMUST00000113584.8	chr1	+	1692	14	FSM	ENSMUSG00000033021.17	ENSMUST00000113584.8	1692	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	88.7478310427522	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGCTTGGACTCCTAC	NA	False	NA	12	True	AATAAA	-16	NA	75412586	75419817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75412656_75412789_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUST00000113585.9	chr6	+	3676	8	FSM	ENSMUSG00000033174.18	ENSMUST00000113585.9	3676	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	2.55550625999976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTGTCTGCGTGTCTG	NA	False	NA	5	True	AATAAA	-20	NA	88701393	88805342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_88701554_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
ENSMUST00000113595.2	chr9	-	4735	15	FSM	ENSMUSG00000032217.14	ENSMUST00000113595.2	4735	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	103.354872124331	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTTGTGTTTCATAA	2617	False	NA	-19	True	AATAAA	-15	NA	70410636	70332711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410513
ENSMUST00000113597.8	chr6	-	1859	7	FSM	ENSMUSG00000079477.10	ENSMUST00000113597.8	1859	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	826.251374179392	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCACTATCCTACTC	3756	False	NA	36	True	NA	NA	NA	87996765	87976424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_87996617
ENSMUST00000113598.8	chr6	-	2031	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113598.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	727.359718433733	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGAACAGCTGCTGTC	NA	False	NA	NA	False	AATAAA	-11	NA	88021999	87976098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88021918
ENSMUST00000113600.10	chr6	-	2159	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	1571	junction_1	157.281403859452	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTCTTTTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	88022252	87976087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ENSMUST00000113605.10	chr1	-	1571	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_14	185.094639334056	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293589	75285208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ENSMUST00000113606.2	chr6	+	1572	6	FSM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	461.093656430014	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCTCTCACCCAGTA	3335	False	NA	44	True	AATAAA	-30	NA	87891287	87913611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ENSMUST00000113607.10	chr6	+	4140	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	198.307183759023	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87864795	87890577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUST00000113607.10-0	chr6	+	2961	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	114	1065	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.307183759023	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATACTCAAAGAAACC	NA	False	NA	1	True	AATAAA	-21	NA	87864909	87889512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUST00000113612.10	chr2	+	1958	7	FSM	ENSMUSG00000026856.15	ENSMUST00000113612.10	1958	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	126.441027096957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTGAGCATACATTACT	NA	False	NA	7	True	AATAAA	-14	NA	30282427	30290539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287479_30287570_30289153
ENSMUST00000113615.9	chr19	-	7264	35	FSM	ENSMUSG00000054874.13	ENSMUST00000113615.9	7264	35	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_25	21.6322679648029	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738936	5714662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ENSMUST00000113617.3-1	chr6	-	1727	6	FSM	ENSMUSG00000030057.16	ENSMUST00000113617.3	952	6	30	-805	0	0	multi-exon	FALSE	canonical	3	59	junction_4	4719.63282470151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828012	87820063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87825996_87826092_87827885
ENSMUST00000113619.8	chr6	-	1661	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	0	0	0	0	multi-exon	FALSE	canonical	3	2802	junction_3	3497.63613030286	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828062	87820063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ENSMUST00000113620.10	chr2	-	1694	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249277	30234822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000113620.10-0	chr2	-	1347	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	-40	387	0	-57	multi-exon	FALSE	canonical	3	12	junction_5	106.475639131188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCCCCAGGCCCCTCT	NA	False	NA	-13	True	ATTAAA	-15	NA	30249317	30235209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000113621.10	chr2	-	1851	13	FSM	ENSMUSG00000026860.17	ENSMUST00000113621.10	1851	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	147.537824716993	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249344	30234822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30239237_30239250_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000113623.8	chr1	-	2339	17	FSM	ENSMUSG00000026200.14	ENSMUST00000113623.8	2339	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	4.97140259383607	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTCCACACACCTT	5234	False	NA	NA	False	ATTAAA	-13	NA	75187422	75175990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75179218_75179394_75179490_75179586_75184962_75185024_75185330_75185482_75185699_75185867_75186024_75186148_75187234
ENSMUST00000113627.4	chrX	+	489	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	0	0	0	0	multi-exon	FALSE	canonical	3	1046	junction_3	75.7495874576225	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTTTTCTATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	101163052	101171275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
ENSMUST00000113641.4	chr19	-	2154	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	96.4922046702747	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATCAGGAGTTCTTACCA	3440	False	NA	-3	True	AATAAA	-18	NA	5660265	5653041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ENSMUST00000113652.8	chr5	-	854	7	FSM	ENSMUSG00000037685.16	ENSMUST00000113652.8	854	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	8.34166250416147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATGATTCTTAATTAAG	NA	False	NA	NA	False	AATAAA	-25	NA	68004774	67938221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ENSMUST00000113658.8	chr6	+	6238	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	18.2452429112053	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9945	False	NA	14	True	AATAAA	-15	NA	87019827	87069179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ENSMUST00000113662.8	chr2	-	1850	13	FSM	ENSMUSG00000039648.15	ENSMUST00000113662.8	1850	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	43.4421710118431	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095787	30075137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084173_30095644
ENSMUST00000113663.9	chr2	-	2026	14	FSM	ENSMUSG00000039648.15	ENSMUST00000113663.9	2026	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	49.789616559678	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCAAGGCAGCTTCTCTC	NA	False	NA	-10	True	AATAAA	-18	NA	30095813	30075142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30087968_30088172_30095644
ENSMUST00000113669.9	chr17	-	742	4	FSM	ENSMUSG00000036315.14	ENSMUST00000113669.9	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	61.9157133170212	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGATGTTATGTGTGTT	NA	False	NA	-11	True	ACTAAA	-17	NA	37269374	37265247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040
ENSMUST00000113674.8	chr19	-	939	7	FSM	ENSMUSG00000024914.17	ENSMUST00000113674.8	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	385.460655147405	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5474949	5472854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5473054_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUST00000113677.3	chr2	-	4189	16	FSM	ENSMUSG00000039686.15	ENSMUST00000113677.3	4189	16	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	7.41889479639656	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGTGGTGTCTTTTCTT	NA	False	NA	-2	True	AATACA	-17	NA	30014594	29987294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ENSMUST00000113682.9	chr15	+	1480	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCTAGGAGTACATAAC	5927	False	NA	NA	False	AATAGA	-3	NA	102240143	102246574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUST00000113682.9-0	chr15	+	1181	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	11	288	0	0	multi-exon	FALSE	canonical	3	485	junction_2	12.1620995994387	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCAGTCCCTGATCCA	5938	False	NA	16	True	AATAAA	-17	NA	102240154	102246286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUST00000113684.8	chr9	-	887	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113684.8	887	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	167.222110903433	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGGGCCAGGCACAGACT	NA	False	NA	-90	True	NA	NA	NA	66951015	66935329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUST00000113695.8	chr9	-	1607	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	182.146722648058	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTCCTGTCGTC	NA	False	NA	-2	True	AATAAA	-24	NA	66951084	66929873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUST00000113696.8	chr9	-	1714	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113696.8	1714	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	100.853500541273	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGTCCTGTCGTCTG	NA	False	NA	0	True	AATAAA	-26	NA	66951189	66929871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUST00000113697.8	chr9	-	1742	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113697.8	1742	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	230.863460729497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCACATTTAGGACATTTT	NA	False	NA	-25	True	AATAAA	-1	NA	66956557	66929896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUST00000113704.10	chr17	-	1465	5	FSM	ENSMUSG00000045409.17	ENSMUST00000113704.10	1465	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	19.421315609402	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCATTGTGTTTGTCAT	NA	False	NA	0	True	ATTAAA	-20	NA	36582275	36573496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36574130_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ENSMUST00000113711.3	chr2	-	1814	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	11.9973955507018	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGCCCCAAGGAGCA	NA	False	NA	0	True	NA	NA	NA	29938893	29921557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ENSMUST00000113716.3	chrX	-	2591	25	FSM	ENSMUSG00000009670.12	ENSMUST00000113716.3	2591	25	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	14.9015286315047	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGCTAAGTTTAACAT	NA	False	NA	NA	False	NA	NA	NA	100103273	99921487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_99921832_99923582_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ENSMUST00000113717.8	chr2	+	7958	56	FSM	ENSMUSG00000057738.15	ENSMUST00000113717.8	7958	56	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_36	107.955276935321	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTGCTCCTCTTTATCT	NA	False	NA	21	True	AATAAA	-21	NA	29855571	29921463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ENSMUST00000113718.8	chrX	-	3278	30	FSM	ENSMUSG00000009670.12	ENSMUST00000113718.8	3278	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	15.4932381399703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCATTGATCAGCTGATT	NA	False	NA	-5	True	AATAAA	-16	NA	100103273	99882253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_99882667_99883306_99883472_99892654_99892776_99893874_99893984_99895431_99895582_99920141_99920217_99923584_99923700_99925849_99925921_99926528_99926616_99927967_99928009_99947363_99947421_99949724_99949811_99960131_99960257_99976993_99977097_99990261_99990400_99995170_99995257_99998305_99998458_100015699_100015779_100018785_100018868_100021229_100021326_100029298_100029354_100051308_100051395_100059149_100059231_100076103_100076224_100076306_100076388_100082652_100082733_100087046_100087132_100094064_100094187_100102961_100103024_100103118
ENSMUST00000113721.8	chr1	-	1451	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	27.6463557752974	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCCTATGTGGTATGA	NA	False	NA	NA	False	AATAAA	-25	NA	74640536	74632911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ENSMUST00000113726.8	chr5	-	4703	7	FSM	ENSMUSG00000070780.12	ENSMUST00000113726.8	4703	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.5071668019088	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTTTTCCTTTAAAA	NA	False	NA	5	True	AATAAA	-23	NA	66255534	66173891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66255501
ENSMUST00000113727.8	chr19	-	2874	16	FSM	ENSMUSG00000024862.17	ENSMUST00000113727.8	2874	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	30.00814704191	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGGCTTGTTTTGAGGA	NA	False	NA	-3	True	AATAAA	-16	NA	5168326	5157775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160287_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167498_5168211
ENSMUST00000113728.8	chr19	-	2838	16	FSM	ENSMUSG00000024862.17	ENSMUST00000113728.8	2838	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	30.00814704191	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTGTTTTGAGGAGT	NA	False	NA	-1	True	AATAAA	-18	NA	5168325	5157773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160287_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168211
ENSMUST00000113733.10	chr1	+	1488	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGCTTGTGCCTTTCCTC	1131	False	NA	4	True	CATAAA	-16	NA	74627447	74631283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUST00000113733.10-0	chr1	+	1468	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	85	-65	0	0	multi-exon	FALSE	canonical	3	89	junction_1	21.8136822818587	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGTACCTACAAGATCTA	1216	False	NA	13	True	AATAAA	-14	NA	74627532	74631348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUST00000113735.3	chrX	+	3692	14	FSM	ENSMUSG00000000881.13	ENSMUST00000113735.3	3692	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	29.3332212656995	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGCTCAGAGGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	99818346	99862014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_99818551_99819412_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ENSMUST00000113753.8	chr6	+	2222	7	FSM	ENSMUSG00000054226.14	ENSMUST00000113753.8	2222	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	87.3983536585342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTTATTATGTC	3409	False	NA	24	True	NA	NA	NA	85892719	85907266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85892773_85896898_85897007_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ENSMUST00000113755.8	chr2	+	2305	17	FSM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_4	168.994082736645	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7226	False	NA	13	True	AATAAA	-17	NA	29779829	29812551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUST00000113756.8	chr2	+	3826	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_4	191.01803579767	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7203	False	NA	13	True	AATAAA	-13	NA	29779806	29821757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUST00000113757.8	chr2	+	3082	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113757.8	3082	21	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	283.670455810964	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTTATTTTATTT	7203	False	NA	NA	False	NA	NA	NA	29779806	29821107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUST00000113759.9	chr2	+	3807	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113759.9	3807	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	298.874656001475	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTCCTTTGATTT	7225	False	NA	13	True	AATAAA	-13	NA	29779828	29821757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUST00000113767.8	chr2	+	2249	16	FSM	ENSMUSG00000026790.20	ENSMUST00000113767.8	2249	16	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	277.041625432393	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	7128	False	NA	13	True	AATAAA	-17	NA	29779731	29812551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUST00000113779.8	chrX	+	4955	8	FSM	ENSMUSG00000059327.10	ENSMUST00000113779.8	4955	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	8.05339325111737	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGACATTATCTTGAGC	NA	False	NA	5	True	AATAAA	-16	NA	99019211	99444366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_99019783_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438756_99440510
ENSMUST00000113790.8	chrX	-	2108	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	143.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTGCGCTTACACA	NA	False	NA	NA	False	NA	NA	NA	98514293	98509343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_98511189_98511728_98511921_98514222
ENSMUST00000113793.4	chr19	-	3508	2	FSM	ENSMUSG00000006456.11	ENSMUST00000113793.4	3508	2	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	7814	False	NA	0	True	AATAAA	-27	NA	4861613	4850949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4854044_4861199
ENSMUST00000113797.4	chrX	-	1676	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113797.4	1676	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	188.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTATTAAAGTTCTTCTT	NA	False	NA	-36	True	NA	NA	NA	98514278	98509751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_98511180_98511728_98511921_98514222
ENSMUST00000113803.8	chr2	-	490	4	FSM	ENSMUSG00000039826.14	ENSMUST00000113803.8	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	23.6126143312331	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGCTGTAGCTAGG	NA	False	NA	NA	False	NA	NA	NA	29677642	29673230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUST00000113805.8	chr1	+	740	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	89	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCAGGTTGAATTTGT	NA	False	NA	6	True	AATAAA	-24	NA	74324088	74326613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74324297_74325000_74325170_74326250
ENSMUST00000113814.11	chr17	+	3131	3	FSM	ENSMUSG00000034595.18	ENSMUST00000113814.11	3131	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	4	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCTCTTGCTGCCTTC	9931	False	NA	6	True	AATAAA	-13	NA	36177551	36186479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36179678_36184617_36184832_36185688
ENSMUST00000113819.2	chr1	+	1313	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113819.2	1313	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	696.999605451825	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATTCC	7881	False	NA	18	True	NA	NA	NA	74275708	74307147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74275770_74275976_74276207_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUST00000113820.9	chr1	+	1439	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	0	0	0	0	multi-exon	TRUE	canonical	3	1389	junction_1	306.215936881149	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATTTGTTGATTTT	7828	False	NA	14	True	AATAAA	-19	NA	74275655	74307368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUST00000113822.3	chr19	-	2918	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGTTTTTCGTCTCA	NA	False	NA	0	True	AATAAA	-18	NA	4665695	4661812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4662667_4663183_4664543_4664990
ENSMUST00000113824.8	chr9	+	2809	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	89.4905333292609	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATTTGTTTTTTTTGTC	6186	False	NA	NA	False	AATAAA	-32	NA	65201576	65237940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUST00000113826.8	chrX	-	2794	26	FSM	ENSMUSG00000031214.14	ENSMUST00000113826.8	2794	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	5.66307337052947	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTTGTTTCTCCTTTGT	NA	False	NA	NA	False	TATAAA	-24	NA	97934387	97601856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986_97934106_97934303
ENSMUST00000113827.4	chr16	-	2382	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_4	11.1214882097676	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	NA	False	NA	45	True	AATAAA	-17	NA	95883726	95867867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ENSMUST00000113832.2	chrX	-	4753	8	FSM	ENSMUSG00000034457.11	ENSMUST00000113832.2	1433	8	-22	-3298	0	0	multi-exon	FALSE	canonical	3	11	junction_7	44.9743691178767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTGTTTATTCCTC	NA	False	NA	-23	True	AATAAA	-14	NA	96420778	96377445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414907_96420706
ENSMUST00000113851.8	chr6	+	1323	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	71.6054001687955	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	9304	False	NA	11	True	AATAAA	-19	NA	83772009	83779536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUST00000113852.6	chr19	-	2705	14	FSM	ENSMUSG00000034616.18	ENSMUST00000113852.6	2705	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_12	2.03228381748045	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGACATTTTCCATTT	2350	False	NA	-25	True	AATAAA	-14	NA	4319208	4311723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4312661_4313574_4313846_4313935_4314137_4314341_4314489_4315130_4315178_4315319_4315449_4315637_4315732_4315837_4316027_4316134_4316201_4316402_4316475_4316549_4316666_4317774_4318007_4318572_4318611_4319042
ENSMUST00000113853.3	chr2	+	3271	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_10	16.137738156191	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGGACTCAGCAGAGAAA	NA	False	NA	18	True	AATAAA	-19	NA	28730470	28795583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ENSMUST00000113864.3	chrX	-	2581	14	FSM	ENSMUSG00000057421.13	ENSMUST00000113864.3	2581	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	331.353544718678	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991003_94991055_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ENSMUST00000113865.5	chr5	+	5440	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATGTCTTCTGTGGGA	NA	False	NA	16	True	AATAAA	-22	NA	53747812	53814704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000113865.5-1	chr5	+	4161	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	54	1225	54	0	multi-exon	FALSE	canonical	3	158	junction_1	104.823470654239	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAATCAATTTCAATA	NA	False	NA	6	True	ATTAAA	-17	NA	53747866	53813479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUST00000113867.9	chr2	+	3987	23	FSM	ENSMUSG00000026812.17	ENSMUST00000113867.9	7682	23	7	3688	0	-1069	multi-exon	FALSE	canonical	2	11	junction_16	12.8165698535106	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGTCCAATATGCCA	3465	False	NA	29	True	NA	NA	NA	28531261	28577491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
ENSMUST00000113888.3	chr6	-	1007	6	FSM	ENSMUSG00000014554.14	ENSMUST00000113888.3	1007	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	78.3019795407498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483951	83457198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUST00000113889.9	chr2	-	2667	12	FSM	ENSMUSG00000026816.15	ENSMUST00000113889.9	2667	12	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	52.8098100077803	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGTTTGATGCCCT	NA	False	NA	-49	True	AATAAA	-22	NA	28473201	28456322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_28457190_28457619_28457815_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
ENSMUST00000113890.2	chr9	-	3224	17	FSM	ENSMUSG00000032396.18	ENSMUST00000113890.2	3224	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	12.7223965902655	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTACTTTTTTTTC	5887	False	NA	-3	True	ATTAAA	-13	NA	64247739	64214292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64247570
ENSMUST00000113898.8	chrX	+	784	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113898.8	784	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	51.8975854447969	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGGGTGATGCCATA	NA	False	NA	NA	False	AGTAAA	-39	NA	93410722	93460567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_93410769_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUST00000113904.9	chr5	+	2485	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	14.4327944472148	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940395	52982007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ENSMUST00000113905.8	chr16	-	758	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113905.8	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	183.830084589003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	False	NA	NA	False	AATAAA	-28	NA	94171874	94165305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171753
ENSMUST00000113906.9	chr16	-	745	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_4	117.933243828871	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	False	NA	NA	False	AATAAA	-28	NA	94171571	94165305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
ENSMUST00000113910.8	chr16	-	966	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	False	NA	NA	False	AATAAA	-28	NA	94171553	94165305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
ENSMUST00000113910.8-0	chr16	-	776	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	185	5	0	0	multi-exon	FALSE	canonical	3	214	junction_4	95.9283586850104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94171368	94165310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
ENSMUST00000113911.9	chrX	+	1227	5	FSM	ENSMUSG00000043929.17	ENSMUST00000113911.9	1227	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	15.1224171348366	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCAGCCTGGCATGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	93278595	93297673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93297545
ENSMUST00000113914.8	chr16	-	912	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113914.8	912	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	179.103845575688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGTAGATCTATATGT	NA	False	NA	NA	False	AATAAA	-28	NA	94171874	94165305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171599
ENSMUST00000113926.8	chrX	-	6762	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113926.8	6762	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	41.1562478208823	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTGGAGTGTTGGCT	NA	False	NA	-2	True	AATAAA	-21	NA	93166506	93118237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166337
ENSMUST00000113927.8	chrX	-	6933	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTGGAGTGTTGGCT	NA	False	NA	-2	True	AATAAA	-21	NA	93167013	93118237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
ENSMUST00000113927.8-0	chrX	-	5181	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	275	1477	0	-1477	multi-exon	FALSE	canonical	3	21	junction_7	34.1317973719043	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGTTCAGTCTATTTGA	NA	False	NA	-2	True	AATAAA	-23	NA	93166738	93119714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
ENSMUST00000113936.10	chr6	-	1314	4	FSM	ENSMUSG00000030035.15	ENSMUST00000113936.10	1314	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	56.6627449623354	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATTCTGGGTAGAG	NA	False	NA	-7	True	ATTAAA	-17	NA	83098540	83096024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183
ENSMUST00000113938.5	chr6	+	695	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_2	17.5	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	7383	False	NA	NA	False	ATTAAA	-19	NA	83086020	83086920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83086185_83086294_83086408_83086502
ENSMUST00000113941.9	chr2	-	5289	13	FSM	ENSMUSG00000026918.17	ENSMUST00000113941.9	5289	13	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_5	87.0507514805779	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAAAAGGGAAAGAAG	NA	False	NA	5	True	NA	NA	NA	27365685	27335611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ENSMUST00000113952.10	chr2	+	2890	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	0	0	0	0	multi-exon	FALSE	canonical	3	1324	junction_4	114.959164347413	2344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405168	27426547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUST00000113960.3	chrX	-	4182	12	FSM	ENSMUSG00000035395.12	ENSMUST00000113960.3	4182	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.962091385841669	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTTCTTTTAATGTG	NA	False	NA	NA	False	AAGAAA	-44	NA	88453295	88447453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_88450288_88450374_88450515_88450602_88450690_88450915_88451066_88451156_88451245_88451506_88451655_88451746_88451836_88452081_88452154_88452379_88452547_88452655_88452806_88452945_88453058_88453150
ENSMUST00000113970.8	chr19	+	2975	10	FSM	ENSMUSG00000045098.20	ENSMUST00000113970.8	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_9	36.6093828625975	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTCTTGAGTCTGG	NA	False	NA	56	True	AATAAA	-15	NA	3818032	3858835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
ENSMUST00000113978.9	chrX	-	3592	21	FSM	ENSMUSG00000025059.17	ENSMUST00000113978.9	4279	21	29	658	0	-658	multi-exon	FALSE	canonical	3	8	junction_12	44.8534000940843	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820230	84746200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84782827_84782846_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUST00000113979.10	chr1	-	4461	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_5	113.959902487673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATCGGGTACTGTTGTTTG	NA	False	NA	-2	True	AATAAA	-17	NA	67078031	67039675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
ENSMUST00000113980.4	chr6	+	1945	10	FSM	ENSMUSG00000030041.10	ENSMUST00000113980.4	1945	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	176.542723818721	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTCAGAGCATTCC	NA	False	NA	12	True	ATTAAA	-17	NA	82923882	83007164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
ENSMUST00000113991.8	chrX	+	4438	18	FSM	ENSMUSG00000045103.20	ENSMUST00000113991.8	4438	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	104.727393692478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATACCTATTGGT	NA	False	NA	10	True	AATAAA	-16	NA	84092018	84248645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84241109_84241142_84246076
ENSMUST00000113995.2	chr1	+	2713	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	373.751439982362	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	False	NA	5	True	ATTAAA	-12	NA	66739989	66758964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUST00000113997.9	chr19	-	4952	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_9	67.9031613363524	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625749	3504932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ENSMUST00000114011.11	chr17	+	840	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_1	217.150869213089	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	-6	True	NA	26	True	AATAAA	-20	NA	35200855	35204867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUST00000114016.10	chrX	-	1725	3	FSM	ENSMUSG00000046942.18	ENSMUST00000114016.10	1725	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	42	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTCTCTTTTATTAC	NA	False	NA	0	True	AATAAA	-22	NA	78679188	78666836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_78668390_78671446_78671527_78679096
ENSMUST00000114018.10	chr1	+	5303	13	FSM	ENSMUSG00000015222.19	ENSMUST00000114018.10	5303	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	3.99652626942727	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACAAGTTTCAGATTTT	705	False	NA	14	True	AATAAA	-15	NA	66290805	66481740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_66290872_66361562_66361628_66401361_66401440_66419647_66419933_66438547_66438662_66440602_66440681_66459293_66459356_66460804_66460950_66464355_66464688_66470685_66470779_66472672_66472755_66477412_66477526_66477950
ENSMUST00000114020.10	chr2	-	2278	8	FSM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	23.9344342497821	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854398	26843577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUST00000114023.3	chr16	-	1154	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTTCTCTTTTTT	9102	False	NA	NA	False	AATAAA	-24	NA	91525589	91491225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000114023.3-0	chr16	-	956	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	78	120	0	-114	multi-exon	FALSE	canonical	3	81	junction_1	469.417790170329	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCTAGAGTACATTTT	9180	False	NA	2	True	AATAAA	-25	NA	91525511	91491345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUST00000114024.9	chrX	-	3900	4	FSM	ENSMUSG00000047996.17	ENSMUST00000114024.9	3900	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.64279609239471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTTTTTCTTATATA	NA	False	NA	NA	False	AATAAA	-18	NA	77627502	77493218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_77496779_77527356_77527518_77564376_77564428_77627374
ENSMUST00000114032.8	chr9	-	2586	16	FSM	ENSMUSG00000047766.16	ENSMUST00000114032.8	2586	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	7.13675930190541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCCAGTTTG	4119	False	NA	NA	False	AATAAA	-11	NA	60594817	60494521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60594421_60594479_60594693
ENSMUST00000114033.9	chr17	+	3882	28	FSM	ENSMUSG00000013787.16	ENSMUST00000114033.9	3882	28	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_1	79.9703820344975	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGGTGATTGTTTCAG	6670	False	NA	19	True	AATAAA	-20	NA	35117444	35133027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUST00000114034.9	chr9	-	2779	16	FSM	ENSMUSG00000047766.16	ENSMUST00000114034.9	2779	16	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	6.23965811029205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTTGTATGGTT	3535	False	NA	NA	False	AATAAA	-21	NA	60595401	60494511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60594421_60594479_60595094
ENSMUST00000114036.9	chr16	+	7945	5	FSM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	147.892697588488	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGCCATTGTGTGTTT	NA	False	NA	4	True	NA	NA	NA	91444767	91460921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91459379
ENSMUST00000114037.9	chr16	+	8399	12	FSM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_11	95.0516171212009	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCTTATTCTCTGG	NA	False	NA	14	True	AATAAA	-1	NA	91444766	91476083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ENSMUST00000114047.10	chr5	-	2762	11	FSM	ENSMUSG00000039753.17	ENSMUST00000114047.10	2762	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	169.180495329692	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCAATATCTTTTGTGT	2824	False	NA	-9	True	AATAAA	-20	NA	43978980	43901965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43978882
ENSMUST00000114049.2	chr6	-	690	2	FSM	ENSMUSG00000079523.9	ENSMUST00000114049.2	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	26814	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	72935285	72934335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72934636_72934895
ENSMUST00000114050.8	chr6	-	570	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGGTCTGAATTTTTTA	NA	False	NA	-11	True	AATAAA	-20	NA	72935471	72934329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72934636_72934895_72935008_72935319
ENSMUST00000114050.8-0	chr6	-	475	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	89	6	0	0	multi-exon	FALSE	canonical	3	26814	junction_1	200.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	72935382	72934335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72934636_72934895_72935008_72935319
ENSMUST00000114053.9	chr6	-	1888	13	FSM	ENSMUSG00000055799.14	ENSMUST00000114053.9	1888	13	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_8	90.8812946772999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTCAATATTTGACCACT	5125	False	NA	NA	False	NA	NA	NA	72765935	72604254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ENSMUST00000114053.9-0	chr6	-	3027	13	FSM	ENSMUSG00000055799.14	ENSMUST00000114053.9	1888	13	-245	-894	57	0	multi-exon	FALSE	canonical	3	158	junction_8	90.8812946772999	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	4880	False	NA	-8	True	AATAAA	-14	NA	72766180	72603360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ENSMUST00000114057.8	chrX	-	3160	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114057.8	3160	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	80.1414305393215	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTATTCTCTACTCTC	NA	False	NA	NA	False	AATAAA	-12	NA	74886669	74829273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74886509
ENSMUST00000114059.10	chrX	-	3149	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_13	28.3953047762008	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTTTTGTTTTAATGA	NA	False	NA	NA	False	AATAAA	-26	NA	74918788	74829259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ENSMUST00000114071.8	chr6	+	1400	10	FSM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	14.6439217576592	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	False	NA	12	True	AATAAA	-23	NA	72526255	72539966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUST00000114074.8	chrX	+	2473	10	FSM	ENSMUSG00000031201.18	ENSMUST00000114074.8	2473	10	0	0	0	0	multi-exon	FALSE	canonical	1	349	junction_4	251.832836972818	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAAAAAGGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	74460315	74495314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466505_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574
ENSMUST00000114079.9	chr1	-	2030	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCAGTGTTGTCTTCTG	NA	False	NA	0	True	ATTAAA	-20	NA	64656401	64645631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ENSMUST00000114079.9-0	chr1	-	1415	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	0	615	0	-608	multi-exon	FALSE	canonical	3	40	junction_3	6.34209919681348	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAACTTGTAGGTTAGA	NA	False	NA	0	True	AATAAA	-24	NA	64656401	64646246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ENSMUST00000114082.9	chr2	-	8797	31	FSM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	26.343373613365	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26335226	26299442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ENSMUST00000114093.2	chr2	+	1638	11	FSM	ENSMUSG00000026926.15	ENSMUST00000114093.2	1638	11	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_8	100.774054200474	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGCCTGGCTGTCTTTT	653	False	NA	NA	False	NA	NA	NA	26279359	26283953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529
ENSMUST00000114099.6	chr5	+	3141	6	FSM	ENSMUSG00000051596.16	ENSMUST00000114099.6	3141	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	1.93907194296653	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGAATTGCCTCTTGC	NA	False	NA	NA	False	NA	NA	NA	38434747	38461551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_38435169_38445240_38445378_38451832_38451892_38455200_38455332_38456966_38457875_38460066
ENSMUST00000114101.8	chr1	+	3496	22	FSM	ENSMUSG00000025964.16	ENSMUST00000114101.8	3496	22	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_12	9.21868358195068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGAGTTCAGTGTTTT	NA	False	NA	NA	False	CATAAA	-18	NA	63485068	63608253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007
ENSMUST00000114102.10	chr2	-	2193	10	FSM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	111.566621850404	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ENSMUST00000114103.8	chr1	+	2655	25	FSM	ENSMUSG00000025964.16	ENSMUST00000114103.8	2655	25	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_24	11.7541363877667	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGAATCCTTTTTTTTC	NA	False	NA	10	True	ATTAAA	-15	NA	63485369	63632071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63631766
ENSMUST00000114113.3	chr5	-	2645	3	FSM	ENSMUSG00000029127.16	ENSMUST00000114113.3	2645	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATCTGTGAGTGACAG	NA	False	NA	NA	False	ATTAAA	-14	NA	38377798	38369381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38371728_38373790_38373958_38377666
ENSMUST00000114115.9	chr2	-	4368	23	FSM	ENSMUSG00000036281.14	ENSMUST00000114115.9	4368	23	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	11.6217948571845	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGCCTTTGGTGATTT	NA	False	NA	-3	True	AATAAA	-31	NA	26270661	26252776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ENSMUST00000114117.2	chrX	+	776	3	FSM	ENSMUSG00000079532.2	ENSMUST00000114117.2	776	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATAAAAAATAGCAAAT	NA	False	NA	NA	False	TTTAAA	-11	NA	73784532	73785794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73784886_73785195_73785325_73785500
ENSMUST00000114122.8	chr16	-	4596	19	FSM	ENSMUSG00000002489.17	ENSMUST00000114122.8	4596	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	16.9246696997148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	89654705	89583998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89654679
ENSMUST00000114126.9	chr5	+	3002	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGATTGTGGACTTAGA	NA	False	NA	NA	False	CATAAA	-13	NA	38196085	38295109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ENSMUST00000114126.9-0	chr5	+	1545	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	509	948	0	0	multi-exon	FALSE	canonical	3	87	junction_9	9.96794863550169	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTATTGCAGTCAGTGAG	NA	False	NA	13	True	AATAAA	-13	NA	38196594	38294161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ENSMUST00000114127.8	chrX	+	3332	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGGGGTTTGGGCTTA	NA	False	NA	3	True	NA	NA	NA	73473276	73493892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUST00000114127.8-0	chrX	+	2548	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	33	751	0	429	multi-exon	FALSE	canonical	3	103	junction_7	10.8217887204986	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTAAATCCTTCCT	NA	False	NA	5	True	AATAAA	-17	NA	73473309	73493141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUST00000114136.9	chr9	-	3824	8	FSM	ENSMUSG00000036986.17	ENSMUST00000114136.9	4343	8	53	466	0	0	multi-exon	FALSE	canonical	3	178	junction_4	73.8752395624418	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2204	False	NA	-13	True	NA	NA	NA	58157016	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000114143.10	chrX	-	1899	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	16.2322017915007	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGAGTCAAGGGTGGTG	NA	False	NA	-6	True	AATAAA	-43	NA	73436878	73428324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
ENSMUST00000114144.9	chr9	-	3880	3	FSM	ENSMUSG00000051243.15	ENSMUST00000114144.9	3880	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGTGAGATTTTTGGGG	7223	False	NA	0	True	AATAAA	-19	NA	58111602	58103580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58107267_58108562_58108656_58111501
ENSMUST00000114146.8	chrX	-	1902	3	FSM	ENSMUSG00000032806.14	ENSMUST00000114146.8	1902	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGCTCGGGTCCCTTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	73416852	73412822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73414618_73416219_73416289_73416814
ENSMUST00000114152.2	chrX	-	746	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	662	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	4536	False	NA	-19	True	AATAAA	-29	NA	73397181	73395767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73396105_73396450_73396609_73396930
ENSMUST00000114160.2	chrX	+	1383	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_3	69.864700592566	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	199	False	NA	NA	False	AATAAA	-33	NA	73356638	73363755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUST00000114167.9	chr2	-	7981	17	FSM	ENSMUSG00000026933.18	ENSMUST00000114167.9	7981	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	28.655006107136	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGGAAGAAAGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	25873294	25816849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825574_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUST00000114167.9-0	chr2	-	6575	17	FSM	ENSMUSG00000026933.18	ENSMUST00000114167.9	7981	17	0	1406	0	287	multi-exon	FALSE	canonical	3	23	junction_4	28.655006107136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGGTTGTCACA	NA	False	NA	-2	True	AATAAA	-24	NA	25873294	25818255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825574_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUST00000114180.11	chrX	+	1786	10	FSM	ENSMUSG00000009995.18	ENSMUST00000114180.11	1786	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	91.4165611600053	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326367	73333754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUST00000114182.11	chrX	+	1748	9	FSM	ENSMUSG00000009995.18	ENSMUST00000114182.11	750	9	-332	-666	0	0	multi-exon	FALSE	canonical	3	23	junction_6	86.9927259890159	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326355	73333757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332710_73332789_73332904
ENSMUST00000114184.8	chr16	+	2202	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGATATCATTCTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	84631812	84658203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUST00000114184.8-0	chr16	+	4666	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	0	-2464	0	0	multi-exon	FALSE	canonical	3	375	junction_1	83.9617784882715	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84631812	84660667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUST00000114185.4	chr6	+	2874	2	FSM	ENSMUSG00000073018.7	ENSMUST00000114185.4	2874	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGTGATGTGATT	NA	False	NA	11	True	NA	NA	NA	71270748	71279864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71270843_71277084
ENSMUST00000114195.8	chr16	+	4370	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	0	0	0	0	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTATGGTCTATGAAT	NA	False	NA	17	True	AATAAA	-20	NA	84571010	84622816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
ENSMUST00000114195.8-0	chr16	+	1172	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	156	3042	-107	0	multi-exon	FALSE	canonical	3	3263	junction_7	414.866630361679	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571166	84619774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
ENSMUST00000114200.10	chr9	+	3017	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.8582589013249	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTACTGTGCTGCA	NA	False	NA	14	True	AATAAA	-14	NA	57444845	57450467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
ENSMUST00000114218.2	chr16	-	1271	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	107.072405408677	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3243	False	NA	-4	True	AATAAA	-13	NA	78373545	78341848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ENSMUST00000114225.8	chr6	+	4085	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	0	-2209	0	-55	multi-exon	FALSE	canonical	2	75	junction_1	120.748590974066	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873423	66998279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
ENSMUST00000114226.8	chr6	+	4161	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114226.8	1155	5	0	-3006	0	-55	multi-exon	FALSE	canonical	2	34	junction_3	135.972423674803	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873417	66998279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66873512_66891436_66891495_66920808_66920867_66992708_66992828_66994447
ENSMUST00000114227.8	chr6	+	4147	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114227.8	1125	5	0	-3022	0	-55	multi-exon	FALSE	canonical	2	75	junction_1	125.742544510599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873414	66998279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUST00000114228.8	chr6	+	748	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	0	0	0	0	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACTTCAGTCAAAAACC	NA	False	NA	3	True	ATTAAA	-9	NA	66873406	66994913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ENSMUST00000114228.8-0	chr6	+	4097	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	17	-3366	0	-55	multi-exon	FALSE	canonical	2	250	junction_2	52.550504807809	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873423	66998279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ENSMUST00000114229.4	chr16	+	1657	8	FSM	ENSMUSG00000022865.15	ENSMUST00000114229.4	1657	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	23.9965983983955	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAATGAACATTTTAGA	NA	False	NA	NA	False	AATAAA	-15	NA	78098643	78156662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_78098763_78122044_78122212_78125841_78126047_78130249_78130406_78131056_78131180_78131709_78131849_78133075_78133260_78156098
ENSMUST00000114232.4	chr17	+	1404	6	FSM	ENSMUSG00000079547.5	ENSMUST00000114232.4	1404	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	6.61513416341649	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTTTGTCCTGGGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	34372045	34379204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34372428_34374406_34374689_34376219_34376505_34378317_34378435_34378602_34378639_34378902
ENSMUST00000114234.2	chr2	-	2151	11	FSM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	38.6141165896619	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGTGGTGTTCATC	NA	False	NA	-18	True	ATTAAA	-13	NA	25436922	25408877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856_25429097_25436873
ENSMUST00000114237.8	chr5	+	4123	19	FSM	ENSMUSG00000029098.18	ENSMUST00000114237.8	2956	19	27	-1194	0	0	multi-exon	FALSE	canonical	3	8	junction_1	14.5314686197546	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740421	35771145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_35740664_35741219_35741320_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
ENSMUST00000114242.9	chr17	-	4483	13	FSM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	124.818423675709	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTTTCTTAGTGAGAT	6947	False	NA	-9	True	AATAAA	-23	NA	34340721	34330996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34340456
ENSMUST00000114246.4	chr1	+	4532	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGAATGTTTATTTAC	5354	False	NA	NA	False	AATAAA	-15	NA	59521582	59526114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_59521600_59526100
ENSMUST00000114247.2	chr9	-	2287	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114247.2	2287	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTAGTCGGAATGCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	56554944	56526388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_56528600_56554868
ENSMUST00000114256.2	chr9	-	2782	2	FSM	ENSMUSG00000049556.6	ENSMUST00000114256.2	2782	2	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTGACGTCCTGATG	6223	False	NA	NA	False	AATAAA	-37	NA	56542912	56526371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_56528600_56542358
ENSMUST00000114268.5	chr6	-	1280	6	FSM	ENSMUSG00000025889.14	ENSMUST00000114268.5	1280	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	4.2614551505325	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTTCCTGGTTCCTT	7574	False	NA	-6	True	AATAAA	-20	NA	60805988	60708562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60795307_60795350_60804464_60804612_60805707
ENSMUST00000114276.3	chr9	+	2024	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_5	26.0666879795309	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGCACCTGAGACATTT	960	False	NA	18	True	ATTAAA	-19	NA	55949140	55966361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ENSMUST00000114293.9	chr2	+	1600	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.9536323175369	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTGTATTTCTCATAA	6666	False	NA	6	True	AGTAAA	-15	NA	25262341	25266815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ENSMUST00000114294.8	chr6	+	2178	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	24.9849732617205	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACATTATCTGTCACAT	NA	False	NA	76	True	NA	NA	NA	58617548	58669496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUST00000114296.8	chr1	+	1348	7	FSM	ENSMUSG00000026027.14	ENSMUST00000114296.8	1348	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	9.28110386155057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGCTTATGTCGTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	59012680	59030671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171
ENSMUST00000114297.5	chr6	-	2919	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0.866025403784439	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTGTGATTTTTTTGG	NA	False	NA	-2	True	AATAAA	-14	NA	57802144	57729249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
ENSMUST00000114299.8	chrX	-	8456	47	FSM	ENSMUSG00000031328.17	ENSMUST00000114299.8	8456	47	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_46	120.821682727122	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73293426	73267066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669_73290158_73293334
ENSMUST00000114308.10	chr2	-	4165	20	FSM	ENSMUSG00000026959.14	ENSMUST00000114308.10	4165	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	10.2232693135349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9553	False	NA	-4	True	NA	NA	NA	25209107	25181192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25182497_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354_25201418_25203439_25203617_25206766_25206902_25208640
ENSMUST00000114310.10	chr2	-	4276	21	FSM	ENSMUSG00000026959.14	ENSMUST00000114310.10	4276	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	9.82395032560731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9553	False	NA	-4	True	NA	NA	NA	25209107	25181192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25182497_25184449_25184561_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354_25201418_25203439_25203617_25206766_25206902_25208640
ENSMUST00000114321.2	chr6	-	3868	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114321.2	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	71.2569684701472	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTGGTTTTTTGGTTT	9626	False	NA	-1	True	AATAAA	-16	NA	56774798	56754509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774467
ENSMUST00000114323.8	chr6	-	3816	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	4.02768199119819	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTGGTTTTTTGGTTTT	9703	False	NA	0	True	AATAAA	-17	NA	56774721	56754508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
ENSMUST00000114329.8	chr5	-	1906	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_12	91.0092715057098	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794536	34790992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
ENSMUST00000114331.10	chr5	-	1754	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_12	99.4937183946806	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTCCGTCTTACTATT	NA	False	NA	-4	True	AATAAA	-20	NA	34794556	34790989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
ENSMUST00000114336.4	chr2	+	2787	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	10.4986771653491	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGCCTTCTTTAC	NA	False	NA	14	True	AATAAA	-16	NA	25152629	25159897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
ENSMUST00000114338.9	chr5	+	4007	16	FSM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_14	162.471932618803	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731007	34789652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787813
ENSMUST00000114340.9	chr5	+	3761	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_14	43.2925501438664	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731216	34789652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ENSMUST00000114348.8	chr1	-	1033	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	35.853482707015	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTCCTTTTTTTTA	NA	False	NA	1	True	AATAGA	-28	NA	58484593	58470152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ENSMUST00000114349.9	chr2	-	2336	14	FSM	ENSMUSG00000006471.19	ENSMUST00000114349.9	2336	14	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	18.4333117547694	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145421	25137240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUST00000114352.8	chrX	-	3825	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_10	79.7365484565473	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	-4	True	NA	NA	NA	73067521	73057523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUST00000114352.8-1	chrX	-	3464	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	-3	364	0	-356	multi-exon	FALSE	canonical	3	90	junction_10	79.7365484565473	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGAATTTGTTGTGCT	NA	False	NA	-7	True	AATAAA	-27	NA	73067524	73057887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUST00000114354.10	chrX	-	3835	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTAATTTTCTTT	NA	False	NA	0	True	NA	NA	NA	73067524	73057519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUST00000114354.10-0	chrX	-	3380	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	87	368	0	-356	multi-exon	FALSE	canonical	3	198	junction_10	56.8590076026845	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGAATTTGTTGTGCT	NA	False	NA	-7	True	AATAAA	-27	NA	73067437	73057887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUST00000114355.2	chr2	+	1333	1	FSM	ENSMUSG00000044628.6	ENSMUST00000114355.2	1333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTGTTCACTGATTGA	NA	False	NA	16	True	ATTAAA	-17	NA	25132940	25134273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25132900_25134300
ENSMUST00000114371.5	chr16	-	1150	10	FSM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	0	0	0	0	multi-exon	TRUE	canonical	3	200	junction_5	24.152805731247	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTTTCTCTTTCCCCT	NA	False	NA	-9	True	AATAAA	-32	NA	57427209	57122362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826_57143907_57427028
ENSMUST00000114372.3	chrX	-	8262	26	FSM	ENSMUSG00000031386.15	ENSMUST00000114372.3	8262	26	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	97.9245913956244	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATCTGGTATTTACCCG	NA	False	NA	-15	True	ATTAAA	-18	NA	73009957	72986402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ENSMUST00000114379.8	chrX	-	1318	11	FSM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_8	509.144390129166	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974398	72965726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
ENSMUST00000114387.8	chrX	-	979	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114387.8	979	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	343.561063104701	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGAATGTGCATAGTGG	NA	False	NA	-15	True	AATAAA	-24	NA	72965494	72960492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72960889_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000114389.10	chrX	-	1031	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_1	110.126457923125	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGGGTATGCTTTTT	NA	False	NA	-3	True	AATAAA	-36	NA	72965530	72960480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000114390.8	chrX	-	797	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114390.8	797	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	441.154607541508	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAATAAATGTCACCCAG	NA	False	NA	-48	True	NA	NA	NA	72965438	72960525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72960802_72961448_72961534_72963107_72963147_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUST00000114399.8	chr5	+	7786	9	FSM	ENSMUSG00000057406.17	ENSMUST00000114399.8	7786	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	103.950709473288	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGACTGGTTTGTGTT	3669	False	NA	NA	False	AATAAA	-21	NA	34000455	34034626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34028750
ENSMUST00000114410.10	chr1	-	2512	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	14.3372087784044	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTGACTACTTACT	NA	False	NA	1	True	AATAAA	-25	NA	58009287	57994406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
ENSMUST00000114418.10	chr2	-	4902	26	FSM	ENSMUSG00000036893.18	ENSMUST00000114418.10	4902	26	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_25	81.9082413435913	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAGTACTTTA	NA	False	NA	-25	True	AATGAA	-4	NA	24781715	24680806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24781694
ENSMUST00000114425.3	chr6	-	1872	3	FSM	ENSMUSG00000038227.16	ENSMUST00000114425.3	851	3	0	-1021	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACGTTGTGCGGCTCTGCT	9733	False	NA	NA	False	AATAAA	-15	NA	52203169	52200079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52201463_52202507_52202598_52202770
ENSMUST00000114426.10	chr5	+	2187	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	0	0	0	0	multi-exon	FALSE	canonical	3	792	junction_7	83.9525193797308	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACCCAGGTCCTGTTGT	NA	False	NA	32	True	ACTAAA	-20	NA	33815929	33829542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUST00000114432.9	chr2	-	4539	26	FSM	ENSMUSG00000036893.18	ENSMUST00000114432.9	4539	26	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_18	57.4611660167108	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAACAAAATGATTT	9630	False	NA	NA	False	AATAAA	-25	NA	24809586	24681154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ENSMUST00000114437.9	chr9	+	3430	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_13	51.8120622627431	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATTTCACAGTTTC	-13	True	NA	NA	False	NA	NA	NA	50768236	50792731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUST00000114444.9	chr16	-	2295	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	369.138439477657	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850102	55835868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ENSMUST00000114446.8	chr6	+	1719	6	FSM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	927.333381260483	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447674	51460684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUST00000114449.7	chr5	+	2193	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_4	39.7106723690244	757	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGAGGTGTTTGTAA	NA	False	NA	20	True	AATAAA	-21	NA	33492852	33530640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUST00000114458.8	chr16	-	3627	12	FSM	ENSMUSG00000035356.18	ENSMUST00000114458.8	3627	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.64418901313618	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCTTTTCTAGTGCC	NA	False	NA	-10	True	AATAAA	-17	NA	55642501	55631737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55633147_55634312_55634481_55634603_55634715_55636002_55636173_55636430_55636495_55636679_55636827_55637193_55637300_55638091_55638898_55639110_55639215_55639354_55639386_55639929_55640070_55642130
ENSMUST00000114459.8	chr6	-	1728	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_11	2433.70552759395	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446806	51439739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUST00000114465.9	chrX	+	3314	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	45.3026857187665	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72717390	72726108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ENSMUST00000114466.8	chr6	-	2916	21	FSM	ENSMUSG00000029822.16	ENSMUST00000114466.8	2916	21	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_7	3.40404171537307	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTGTGGGTTACAA	NA	False	NA	NA	False	AATAAA	-15	NA	50347298	50273784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102
ENSMUST00000114471.3	chr16	+	6648	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_15	12.7088776425873	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTATGTTATTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	51851587	52028411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ENSMUST00000114471.3-0	chr16	+	3603	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	381	2664	0	0	multi-exon	FALSE	canonical	3	25	junction_15	12.7088776425873	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAGAGCTTCTCTTGT	NA	False	NA	NA	False	AATAAA	-29	NA	51851968	52025747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ENSMUST00000114472.8	chrX	-	1532	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114472.8	1532	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	13.5176652099123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTGGTGCTGAACTGG	NA	False	NA	-3	True	AATAAA	-14	NA	72703723	72699600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
ENSMUST00000114473.8	chrX	-	1492	12	FSM	ENSMUSG00000002012.14	ENSMUST00000114473.8	1492	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	19.8644164606543	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703330	72699599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72699993_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703272
ENSMUST00000114474.8	chr9	+	1335	4	FSM	ENSMUSG00000032068.15	ENSMUST00000114474.8	1689	4	2	352	0	-352	multi-exon	FALSE	canonical	3	38	junction_1	3.39934634239519	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAATACCGAAATGTG	NA	False	NA	NA	False	AATAAA	-11	NA	50405826	50416430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50406047_50410394_50410600_50412372_50412429_50415576
ENSMUST00000114492.8	chr1	-	3565	2	FSM	ENSMUSG00000043629.13	ENSMUST00000114492.8	3565	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCAGTCCTCATTT	174	False	NA	-5	True	AATAAA	-14	NA	52992509	52961482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52964894_52992355
ENSMUST00000114499.8	chrX	+	6284	5	FSM	ENSMUSG00000031365.14	ENSMUST00000114499.8	6284	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	9.63068014212911	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386226	72402686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826
ENSMUST00000114500.3	chr6	+	514	3	FSM	ENSMUSG00000029815.13	ENSMUST00000114500.3	2587	3	0	2073	0	0	multi-exon	FALSE	canonical	3	89	junction_1	380.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGTAAATAAACAAAGTT	348	False	NA	-21	True	NA	NA	NA	49050781	49061612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49051038_49059778_49059861_49061436
ENSMUST00000114503.9	chrX	-	1656	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	127.059963698248	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTTCAGCACATATG	NA	False	NA	NA	False	ATTAAA	-14	NA	72336582	72326501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
ENSMUST00000114503.9-0	chrX	-	1183	9	FSM	ENSMUSG00000067764.12	ENSMUST00000114503.9	1656	9	0	473	0	-473	multi-exon	FALSE	canonical	3	126	junction_7	127.059963698248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336582	72326974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
ENSMUST00000114509.8	chr1	-	3716	8	FSM	ENSMUSG00000026103.15	ENSMUST00000114509.8	3716	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	80.0693576895452	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52239641	52224438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52226954_52227843_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013
ENSMUST00000114510.8	chr1	-	4420	15	FSM	ENSMUSG00000026103.15	ENSMUST00000114510.8	5596	15	0	1176	0	0	multi-exon	FALSE	canonical	3	106	junction_8	52.7471829211992	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52272391	52224438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ENSMUST00000114513.9	chr1	-	4966	18	FSM	ENSMUSG00000026103.15	ENSMUST00000114513.9	4966	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	80.7225587298202	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGAAAAAGTGTTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	52272382	52202606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52205474_52207494_52207559_52207643_52207721_52208055_52208118_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ENSMUST00000114516.8	chr16	-	3331	31	FSM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_18	21.5464614264152	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAAACCAAAGCTGAGT	4421	False	NA	NA	False	NA	NA	NA	48814304	48746241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ENSMUST00000114518.9	chrX	+	1182	9	FSM	ENSMUSG00000072479.11	ENSMUST00000114518.9	1652	9	0	470	0	309	multi-exon	TRUE	canonical	3	121	junction_8	146.338167868127	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATGCTTTCATTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	72192401	72202008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72200075_72200175_72201393_72201499_72201594
ENSMUST00000114521.8	chrX	-	1474	8	FSM	ENSMUSG00000058328.14	ENSMUST00000114521.8	1474	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	121.461844180947	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTTCAGCACATATG	NA	False	NA	NA	False	ATTAAA	-14	NA	72161308	72151240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
ENSMUST00000114521.8-0	chrX	-	1003	8	FSM	ENSMUSG00000058328.14	ENSMUST00000114521.8	1474	8	0	471	0	303	multi-exon	FALSE	canonical	3	112	junction_7	121.461844180947	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
ENSMUST00000114523.10	chr2	+	3632	12	FSM	ENSMUSG00000026781.18	ENSMUST00000114523.10	3632	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	21.9175766290267	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGTATTGACT	NA	False	NA	NA	False	AATAAA	-17	NA	22959338	23004522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUST00000114524.9	chrX	-	1584	9	FSM	ENSMUSG00000057836.13	ENSMUST00000114524.9	1584	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	496.010190797528	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140623	72129898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138551_72138689_72140586
ENSMUST00000114526.9	chr2	+	3725	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	24.981103969912	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22959079	23004525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUST00000114529.10	chr2	+	3630	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114529.10	3630	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	26.0302975182553	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAGAAATCGACAGCT	NA	False	NA	NA	False	ATTAAA	-11	NA	22959079	23004427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUST00000114530.8	chrX	-	1220	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114530.8	1220	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	102.200477004758	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72286736	72277684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285802_72286183_72286267_72286581
ENSMUST00000114531.8	chrX	-	1104	9	FSM	ENSMUSG00000031362.18	ENSMUST00000114531.8	1104	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	121.935433734415	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTTGGCATGAGTCA	NA	False	NA	-8	True	AATAAA	-15	NA	72286633	72277684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72278057_72278174_72278271_72280979_72281079_72282267_72282368_72283213_72283332_72284921_72284991_72285673_72285789_72286183_72286267_72286581
ENSMUST00000114533.9	chr5	+	2424	13	FSM	ENSMUSG00000029141.17	ENSMUST00000114533.9	2424	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	19.394300422776	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACTGAGGTGATGATCA	NA	False	NA	6	True	AGTAAA	-16	NA	31684338	31711381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705954_31706026_31708056_31708127_31711082
ENSMUST00000114540.4	chrX	-	2287	2	FSM	ENSMUSG00000050424.10	ENSMUST00000114540.4	2287	2	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTCTGGCGATGTTC	NA	False	NA	0	True	AATAAA	-21	NA	72080709	72077586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72077934_72078769
ENSMUST00000114545.8	chr6	+	2913	3	FSM	ENSMUSG00000073096.12	ENSMUST00000114545.8	2913	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCTTGGTCATGGTAT	8279	False	NA	14	True	NA	NA	NA	48531729	48547656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48531917_48533888_48534029_48545070
ENSMUST00000114546.9	chrX	+	3533	19	FSM	ENSMUSG00000031351.16	ENSMUST00000114546.9	3533	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	16.5279411756629	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTGTGTATGTGTGCAC	NA	False	NA	45	True	AATAAA	-45	NA	72030965	72075149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72031126_72040640_72040719_72040887_72041012_72041343_72041410_72042141_72042181_72042274_72042353_72042856_72042944_72043622_72043707_72044593_72044678_72045013_72045053_72046180_72046265_72046978_72047066_72056045_72056235_72059344_72059456_72060300_72060382_72061979_72062049_72064473_72064577_72072450_72072550_72073278
ENSMUST00000114547.8	chr9	+	4444	10	FSM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_8	60.0832755431992	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCCTTTAAATCTCTT	NA	False	NA	12	True	AATAAA	-16	NA	47441554	47764678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ENSMUST00000114547.8-0	chr9	+	1998	10	FSM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	95	2351	0	0	multi-exon	FALSE	canonical	3	143	junction_8	60.0832755431992	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47441649	47762327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ENSMUST00000114551.10	chrX	-	1286	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	0	0	0	0	multi-exon	TRUE	canonical	3	590	junction_4	36.4862987983161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTGTGGATTTTTACA	NA	False	NA	-2	True	CATAAA	-17	NA	71962017	71957137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ENSMUST00000114572.9	chr6	+	4323	18	FSM	ENSMUSG00000042810.15	ENSMUST00000114572.9	4323	18	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.6595014032365	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAACATGTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	48372799	48394400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48372822_48379817_48379945_48380311_48380432_48380924_48381075_48382167_48382324_48383230_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296_48390438_48390989_48391086_48391423_48391535_48392509
ENSMUST00000114573.9	chr9	-	4012	27	FSM	ENSMUSG00000034908.17	ENSMUST00000114573.9	4012	27	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	37.8730361062501	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866275	45849172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45857803_45857867_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ENSMUST00000114576.9	chrX	+	4195	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	56.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCTGTGTCCTCATTCG	NA	False	NA	16	True	ATTAAA	-20	NA	70860363	70868312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70860547_70863673_70863784_70864410
ENSMUST00000114576.9-1	chrX	+	2431	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	32	1732	0	-1732	multi-exon	FALSE	canonical	3	286	junction_1	56.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACACTGGTATTTAGA	NA	False	NA	NA	False	AATAAA	-25	NA	70860395	70866580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70860547_70863673_70863784_70864410
ENSMUST00000114582.9	chrX	+	1743	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	303.596360320739	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599533	70604282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUST00000114583.8	chr6	-	3111	6	FSM	ENSMUSG00000071477.11	ENSMUST00000114583.8	3111	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	40.7401521843009	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTCTTGTTTGGTTTG	NA	False	NA	14	True	AATAGA	-31	NA	48025048	48001121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024919
ENSMUST00000114590.8	chr5	-	2228	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	5.79271573232759	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGTCTCTGCTGAATTG	NA	False	NA	-17	True	AATAAA	-16	NA	31359647	31356324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
ENSMUST00000114603.8	chr5	-	1966	12	FSM	ENSMUSG00000029145.13	ENSMUST00000114603.8	1966	12	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	55.8517814183514	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCATGACTCTGCTGCC	NA	False	NA	-10	True	AATAAA	-14	NA	31350358	31344911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
ENSMUST00000114617.2	chrX	+	3338	15	FSM	ENSMUSG00000031337.17	ENSMUST00000114617.2	3338	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	112.146496756225	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAATATATTAACTAAA	NA	False	NA	-14	True	AATAAA	-18	NA	70258687	70358871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70258754_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339954_70343171_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ENSMUST00000114618.8	chr6	-	2775	20	FSM	ENSMUSG00000029687.17	ENSMUST00000114618.8	2775	20	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	268.321921839443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGTTAGTATTGCATG	NA	False	NA	NA	False	AATAAA	-26	NA	47571964	47507072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ENSMUST00000114618.8-0	chr6	-	2623	20	FSM	ENSMUSG00000029687.17	ENSMUST00000114618.8	2775	20	-28	180	0	0	multi-exon	FALSE	canonical	3	48	junction_12	268.321921839443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ENSMUST00000114630.3	chrX	-	2513	7	FSM	ENSMUSG00000073139.10	ENSMUST00000114630.3	1307	7	0	-1206	0	0	multi-exon	FALSE	canonical	3	188	junction_5	21.8587638158144	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69513723_69513901_69520583
ENSMUST00000114634.3	chr16	-	4451	19	FSM	ENSMUSG00000022687.13	ENSMUST00000114634.3	4451	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	3.24132269906996	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTCACGAGTGAGTCA	NA	False	NA	-5	True	AATAAA	-26	NA	44379260	44305411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313336_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341699_44378800
ENSMUST00000114644.8	chr6	-	2148	8	FSM	ENSMUSG00000029735.18	ENSMUST00000114644.8	2148	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.0319387862467	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAGAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	43643109	43322207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_43323835_43400554_43400667_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ENSMUST00000114647.8	chrX	+	679	4	FSM	ENSMUSG00000062170.13	ENSMUST00000114647.8	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_1	201.191451110627	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATTCTTTTTGTTAAA	NA	False	NA	27	True	ATTAAA	-27	NA	67805486	67848173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67805838_67815650_67815748_67847210_67847300_67848031
ENSMUST00000114653.2	chrX	+	4058	17	FSM	ENSMUSG00000000838.18	ENSMUST00000114653.2	4058	17	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_14	173.862182759075	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722422	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
ENSMUST00000114656.8	chrX	+	4257	16	FSM	ENSMUSG00000000838.18	ENSMUST00000114656.8	4257	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	244.572188843203	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722229	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747274_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ENSMUST00000114657.9	chrX	+	4076	16	FSM	ENSMUSG00000000838.18	ENSMUST00000114657.9	4076	16	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_11	161.476190195335	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722416	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ENSMUST00000114664.8	chr9	+	3424	6	FSM	ENSMUSG00000070305.11	ENSMUST00000114664.8	3424	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3.70944739819828	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTCGTGTCTAACT	NA	False	NA	27	True	AATAAA	-20	NA	44966483	44988734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44966617_44973338_44973506_44977636_44977848_44979504_44979671_44981953_44982018_44986051
ENSMUST00000114666.9	chr16	-	4234	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43959668	43905764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ENSMUST00000114666.9-0	chr16	-	3074	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	287	873	0	-630	multi-exon	FALSE	canonical	3	337	junction_14	44.4035299203538	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGATCAATTTTTGTCT	NA	False	NA	NA	False	AAAAAG	-7	NA	43959381	43906637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ENSMUST00000114671.8	chr2	+	5063	24	FSM	ENSMUSG00000026743.17	ENSMUST00000114671.8	5063	24	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	74.1776083487481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4642	False	NA	12	True	AATAAA	-16	NA	18069446	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ENSMUST00000114672.2	chrX	+	782	8	FSM	ENSMUSG00000079577.2	ENSMUST00000114672.2	782	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	6.1842459491181	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTGTCATTCTTTTGT	NA	False	NA	NA	False	CATAAA	-44	NA	66739303	66749956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_66739413_66739880_66739951_66740099_66740135_66741912_66742031_66742916_66743017_66743790_66743890_66749598_66749704_66749810
ENSMUST00000114675.2	chrX	-	782	8	FSM	ENSMUSG00000079578.2	ENSMUST00000114675.2	782	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	5.823947745897	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTGTCATTCTTTTGT	NA	False	NA	NA	False	CATAAA	-44	NA	66737168	66726505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_66726652_66726758_66726864_66732572_66732672_66733445_66733546_66734431_66734550_66736337_66736373_66736521_66736592_66737059
ENSMUST00000114680.9	chr2	+	5062	23	FSM	ENSMUSG00000026743.17	ENSMUST00000114680.9	3543	23	-101	-1418	-50	0	multi-exon	FALSE	canonical	3	88	junction_1	48.8940497317777	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4592	False	NA	12	True	AATAAA	-16	NA	18069396	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
ENSMUST00000114709.3	chr1	+	3570	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	6.90857402520436	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTTGTGGTTCAGGC	NA	False	NA	NA	False	ATTAAA	-12	NA	44159127	44183930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUST00000114712.8	chr16	+	2168	7	FSM	ENSMUSG00000022793.18	ENSMUST00000114712.8	2168	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.60847480700888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTCTTGTTTTTT	3914	False	NA	7	True	AGTAAA	-17	NA	38562627	38589210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38562798_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
ENSMUST00000114716.4	chr5	+	2220	16	FSM	ENSMUSG00000038828.14	ENSMUST00000114716.4	2220	16	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	100.591230013136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCATCACTCAAGCAGCC	NA	False	NA	NA	False	NA	NA	NA	31026974	31034388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUST00000114725.3	chrX	+	2156	17	FSM	ENSMUSG00000079584.3	ENSMUST00000114725.3	2156	17	0	0	0	0	multi-exon	FALSE	canonical	1	199	junction_7	106.775300719548	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAACCTCCCTGTCTGGC	NA	False	NA	9	True	TATAAA	-2	NA	56454513	56534127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_56454734_56459619_56459688_56461126_56461221_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
ENSMUST00000114729.8	chr5	+	5191	13	FSM	ENSMUSG00000029168.15	ENSMUST00000114729.8	5191	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	9.12718771339538	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTGTGTTTTTTCAAG	NA	False	NA	11	True	ATTAAA	-23	NA	30868907	30956719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580
ENSMUST00000114730.8	chrX	-	2019	9	FSM	ENSMUSG00000031134.17	ENSMUST00000114730.8	2019	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	28.2264835748274	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGAAGCTGCAAACCGAT	NA	False	NA	-12	True	AATAAA	-19	NA	56438322	56431717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437043_56438211
ENSMUST00000114732.3	chr6	+	3762	18	FSM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	4.47522978861417	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTCCATGCCTCAG	328	False	NA	13	True	ATTAAA	-25	NA	41582415	41597443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ENSMUST00000114741.4	chr18	+	2267	15	FSM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.17563905992821	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGACTAAGTTGTGGCAGT	18	False	NA	NA	False	NA	NA	NA	77882244	77970579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ENSMUST00000114751.9	chrX	+	1128	6	FSM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	193.065170344109	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCACTGGCTCACTTAT	NA	False	NA	25	True	NA	NA	NA	56098942	56102566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56102250
ENSMUST00000114763.3	chr16	+	3789	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_9	10.1607086367044	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATAATAGTTGGTTTC	5151	False	NA	NA	False	NA	NA	NA	37597234	37656876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ENSMUST00000114766.8	chrX	-	2891	16	FSM	ENSMUSG00000067878.14	ENSMUST00000114766.8	2891	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	2.18682926224756	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTTGTCTCTTTTT	NA	False	NA	NA	False	AGTAAA	-27	NA	55867686	55843217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_55843463_55844649_55845030_55846362_55846553_55847120_55847203_55849725_55849831_55850759_55850905_55853203_55853331_55854977_55855151_55855397_55855526_55856222_55856912_55858674_55858768_55860884_55860994_55862635_55862800_55864035_55864114_55864203_55864297_55867596
ENSMUST00000114776.4	chr18	+	2077	13	FSM	ENSMUSG00000025423.17	ENSMUST00000114776.4	2077	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	406.688660607432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATGTAGCATTTATGCT	8381	False	NA	19	True	ATTAAA	-31	NA	77153385	77234633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ENSMUST00000114777.10	chr18	+	3060	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCATAATTCTCATCAAT	7899	False	NA	NA	False	CATAAA	-17	NA	77152903	77241496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUST00000114777.10-0	chr18	+	2340	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	37	683	0	0	multi-exon	FALSE	canonical	3	372	junction_1	299.077338556217	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTCTAATTAAAGATG	7936	False	NA	13	True	AATAAA	-26	NA	77152940	77240813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUST00000114779.9	chr6	+	630	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	63	3705	0	0	multi-exon	FALSE	canonical	3	1713	junction_1	435.133695929577	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448348	40457929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUST00000114783.6	chr5	+	2045	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114783.6	2045	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	145.866361974088	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACTGTTCGTAGTCTC	NA	False	NA	-1	True	AATAAA	-14	NA	30360269	30389580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30360385_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUST00000114786.8	chr5	+	2048	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.097988426337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCGTAGTCTCGTTATTA	NA	False	NA	6	True	AATAAA	-21	NA	30360269	30389587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUST00000114797.2	chr6	-	500	3	FSM	ENSMUSG00000029918.10	ENSMUST00000114797.2	500	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	481	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTGTTTAAGATTGGAA	NA	False	NA	-18	True	AATAAA	-12	NA	39787819	39779125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39779479_39782420_39782546_39787797
ENSMUST00000114803.9	chr17	+	2025	10	FSM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	20.9655802580218	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	306	False	NA	17	True	AATAAA	-19	NA	28532492	28545546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ENSMUST00000114810.2	chrX	-	984	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_7	54.1238187409392	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGTGGCAAATAGTCC	NA	False	NA	NA	False	AATAAA	-13	NA	52799663	52785714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ENSMUST00000114822.2	chr6	-	751	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	4055	junction_2	144.5	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTCCGAATGCTGTCCC	NA	False	NA	0	True	AATAAA	-25	NA	39397232	39382472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39382895_39387021_39387151_39397032
ENSMUST00000114823.8	chr6	-	2992	8	FSM	ENSMUSG00000029922.16	ENSMUST00000114823.8	2992	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	1191.73940789358	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39396710	39374737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396400
ENSMUST00000114838.8	chrX	-	3536	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	8.54034542626936	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCGTAAAAGTCTGCCT	NA	False	NA	-13	True	AATAAA	-24	NA	52357897	52332301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ENSMUST00000114839.8	chr5	+	1605	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_5	99.4337026590572	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTGTGTCTGTGTG	4546	False	NA	42	True	AATAAA	-42	NA	29940937	29972101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ENSMUST00000114842.9	chr17	+	5819	25	FSM	ENSMUSG00000024219.17	ENSMUST00000114842.9	5819	25	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	13.4574948139194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTCTGGGGTCTCTGA	4239	False	NA	12	True	AATAAA	-21	NA	28128279	28281749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ENSMUST00000114846.9	chr2	-	4634	15	FSM	ENSMUSG00000026773.20	ENSMUST00000114846.9	4634	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	9.41693004267163	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGACTCGCTTCTC	6308	False	NA	-5	True	AATAAA	-17	NA	11506912	11476636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11506435
ENSMUST00000114848.8	chr17	-	2207	6	FSM	ENSMUSG00000024218.14	ENSMUST00000114848.8	2207	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	61.2483469164679	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTCTCTGTGTTGCCCT	NA	False	NA	-3	True	AATAAA	-25	NA	28128216	28120095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127218_28127754
ENSMUST00000114855.3	chr6	-	1723	2	FSM	ENSMUSG00000061436.16	ENSMUST00000114855.3	1723	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGAGACTTTTTGTT	5042	False	NA	NA	False	NA	NA	NA	38814246	38794841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_38796249_38813930
ENSMUST00000114859.9	chr17	-	3573	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114859.9	3573	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	15.5463018110418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTTTATCCTGTGTG	NA	False	NA	-12	True	ATTAAA	-23	NA	28039516	27970219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27972970_27987109_27987214_28005044_28005243_28012882_28013038_28039150
ENSMUST00000114863.10	chr17	-	3892	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114863.10	3892	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	5.43139024560011	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCGTGTGATTCT	NA	False	NA	-1	True	ATTAAA	-34	NA	28039599	27970208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150
ENSMUST00000114866.2	chrX	-	1232	4	FSM	ENSMUSG00000031118.9	ENSMUST00000114866.2	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	34.0978982734518	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCATCCAACATCAGGC	NA	False	NA	NA	False	NA	NA	NA	51059924	51057768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_51058747_51059091_51059163_51059359_51059477_51059858
ENSMUST00000114876.9	chrX	-	1871	8	FSM	ENSMUSG00000036109.18	ENSMUST00000114876.9	2243	8	0	372	0	0	multi-exon	FALSE	canonical	3	6	junction_7	7.54848275064166	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCTTTCATGCTATAGT	NA	False	NA	NA	False	ATTAAA	-13	NA	50294867	50209328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294650
ENSMUST00000114878.8	chr16	+	3548	11	FSM	ENSMUSG00000022906.16	ENSMUST00000114878.8	3548	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	7.49399759807808	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTGTGAATCGTGAATG	NA	False	NA	13	True	AATAAA	-19	NA	35758839	35792975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
ENSMUST00000114882.9	chr17	-	580	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	301	6	0	0	multi-exon	FALSE	canonical	3	4719	junction_5	828.025700084243	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCACTTGTGTATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	27854218	27849397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUST00000114884.8	chr5	+	6256	18	FSM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	33.4726040951925	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	7	True	CATAAA	-21	NA	28522174	28621103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ENSMUST00000114888.11	chr17	+	1631	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_2	1373.00680533638	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	False	NA	NA	False	AATAAA	-21	NA	27775558	27782642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUST00000114891.2	chrX	-	1761	5	FSM	ENSMUSG00000031111.17	ENSMUST00000114891.2	1761	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.08972473588517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATAGCTTTTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	48886626	48881842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_48883069_48883368_48883651_48883999_48884027_48884155_48884285_48886529
ENSMUST00000114897.9	chr2	-	1166	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	0	0	0	0	multi-exon	FALSE	canonical	3	3857	junction_2	289.314942238504	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9504	False	NA	-2	True	AATAAA	-19	NA	10085321	10060840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUST00000114900.8	chr6	-	4944	13	FSM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	27.2865453210104	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTATGGTTCT	9994	False	NA	0	True	AATAAA	-32	NA	38331208	38282220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUST00000114908.5	chr6	-	3307	22	FSM	ENSMUSG00000038600.13	ENSMUST00000114908.5	3307	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	3.00188904999514	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAAGATGTCGTTATTC	NA	False	NA	NA	False	NA	NA	NA	38086484	38025417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_38026019_38027400_38027573_38028378_38028497_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680_38055894_38058965_38059060_38059854_38059938_38062903_38063031_38064864_38064960_38065547_38065674_38069335_38069431_38069694_38069774_38070872_38071007_38073782_38074002_38086422
ENSMUST00000114909.2	chr2	-	4897	5	FSM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	22.410934831015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCTTTTCCATTTTC	NA	False	NA	-2	True	AATAAA	-18	NA	9958468	9919364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924
ENSMUST00000114912.8	chrX	-	3167	15	FSM	ENSMUSG00000031109.17	ENSMUST00000114912.8	3167	15	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_13	14.647560220329	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACAGGGACTCCTCTGG	NA	False	NA	45	True	NA	NA	NA	48377119	48099334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_48100512_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ENSMUST00000114913.3	chr16	+	3900	21	FSM	ENSMUSG00000022840.10	ENSMUST00000114913.3	7008	21	1763	1345	1763	-1345	multi-exon	FALSE	canonical	1	2	junction_2	1.74570902500961	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTTTAGACTATGCTAGT	NA	False	NA	NA	False	AATAAA	-22	NA	34977009	35124763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_34977606_35069170_35069321_35073510_35073633_35087549_35087662_35089325_35089454_35091207_35091367_35092448_35092591_35094794_35094936_35098864_35098888_35099565_35099711_35100708_35100807_35103891_35103980_35109874_35109992_35110396_35110562_35111871_35112048_35113387_35113418_35114331_35114465_35118716_35118981_35119822_35120028_35122636_35122762_35123982
ENSMUST00000114918.9	chrX	-	3226	16	FSM	ENSMUSG00000031109.17	ENSMUST00000114918.9	3226	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	10.7695042700313	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACAGGGACTCCTCTGG	NA	False	NA	45	True	NA	NA	NA	48377119	48099334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_48100512_48102009_48102058_48102373_48102460_48107659_48107772_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375721_48375782_48376977
ENSMUST00000114925.10	chr1	+	1094	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	76.7739539166767	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGTGACTGTTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	37469219	37478065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUST00000114934.11	chr2	-	5470	14	FSM	ENSMUSG00000002107.19	ENSMUST00000114934.11	5470	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	9.69963093301422	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTCTCTCTCTGCGTG	5831	False	NA	0	True	ATTAAA	-15	NA	6889807	6546679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6889662
ENSMUST00000114935.9	chr17	-	662	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_5	278.895392575783	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9278	False	NA	-18	True	AATAAA	-17	NA	27158517	27156946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
ENSMUST00000114937.8	chr2	+	7484	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4654	False	NA	10	True	ATTAAA	-20	NA	6327477	6451201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ENSMUST00000114937.8-0	chr2	+	4914	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	0	2570	0	326	multi-exon	FALSE	canonical	3	91	junction_4	18.797660514445	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGACAAAGTGATTCAAA	4654	False	NA	NA	False	AATAAA	-21	NA	6327477	6448631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ENSMUST00000114939.2	chr18	-	2233	11	FSM	ENSMUSG00000024515.14	ENSMUST00000114939.2	2233	11	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	24.1669195389069	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGGAGTCGGCCAGTG	5221	False	NA	73	True	NA	NA	NA	73811302	73773071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733
ENSMUST00000114940.9	chrX	-	3863	18	FSM	ENSMUSG00000036916.14	ENSMUST00000114940.9	3863	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	21.8484873935035	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47680638	47630502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667434_47677579_47677627_47680549
ENSMUST00000114942.9	chr2	-	1915	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	65	2418	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.90668171555645	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATGCTTGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	6134957	6104835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
ENSMUST00000114945.9	chrX	-	2221	16	FSM	ENSMUSG00000036932.15	ENSMUST00000114945.9	2221	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	394.039704711199	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602436	47563820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47592459_47592591_47602112
ENSMUST00000114946.4	chr18	+	1290	3	FSM	ENSMUSG00000024513.17	ENSMUST00000114946.4	1290	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	64.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGAAGTGCCTGGTGT	NA	False	NA	13	True	AATAAA	-30	NA	70701404	70715983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_70702039_70713723_70713884_70715487
ENSMUST00000114950.2	chr5	+	2493	11	FSM	ENSMUSG00000038072.15	ENSMUST00000114950.2	2493	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	27.2288449993752	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGACTCTTCTATCTCT	NA	False	NA	13	True	AATAAA	-27	NA	25452360	25470916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ENSMUST00000114958.8	chrX	-	6088	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	6.29359793758705	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTCAGATTCCAATTGT	NA	False	NA	2	True	NA	NA	NA	47543046	47499922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
ENSMUST00000114964.8	chr16	-	2693	16	FSM	ENSMUSG00000061751.17	ENSMUST00000114964.8	2693	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	6.46701030014815	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGTTTTAATGAGGTCA	NA	False	NA	-10	True	AATAAA	-12	NA	33916398	33833515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_33834052_33834327_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
ENSMUST00000114975.8	chr5	-	2205	12	FSM	ENSMUSG00000028944.15	ENSMUST00000114975.8	2205	12	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	21.3386701313649	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTATGTATATGA	NA	False	NA	-9	True	AATAAA	-19	NA	25113467	25067745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094184_25113320
ENSMUST00000114976.9	chr17	+	4934	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	132.110877487879	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCAGGTGTTTTGT	NA	False	NA	17	True	NA	NA	NA	26471924	26504478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ENSMUST00000114977.5	chr18	+	3070	13	FSM	ENSMUSG00000053477.19	ENSMUST00000114977.5	3070	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	34.2271821802497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATGCCAA	NA	False	NA	NA	False	AAAAAG	-32	NA	69726496	69817599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ENSMUST00000114980.8	chr18	+	3497	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114980.8	2192	20	-187	-1118	0	0	multi-exon	FALSE	canonical	3	47	junction_6	22.735258229433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3644	False	NA	NA	False	AATACA	-35	NA	69479243	69817414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUST00000114981.3	chr1	-	1659	10	FSM	ENSMUSG00000046337.18	ENSMUST00000114981.3	1659	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_7	27.7328525599353	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACGCC	NA	False	NA	NA	False	AATACA	-27	NA	36722264	36639056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ENSMUST00000114987.4	chr2	-	3266	11	FSM	ENSMUSG00000039145.17	ENSMUST00000114987.4	1295	11	0	-1971	0	1971	multi-exon	FALSE	canonical	3	40	junction_3	6.22976725086901	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTAAGAGTCATCGTGG	1177	False	NA	NA	False	AATAAA	-16	NA	5680857	5301726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
ENSMUST00000114989.9	chr6	-	3279	11	FSM	ENSMUSG00000038784.14	ENSMUST00000114989.9	3279	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	65.3360543651053	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGTGAGTCTTGTT	7676	False	NA	-3	True	AATAAA	-19	NA	35110629	34999000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUST00000114991.8	chr1	-	3773	15	FSM	ENSMUSG00000026121.14	ENSMUST00000114991.8	3773	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	2.77102353446726	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTTTGACTCAAACCC	NA	False	NA	NA	False	AATAAA	-32	NA	36597430	36587722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593332_36593482_36595012_36595159_36597096
ENSMUST00000114993.9	chr6	-	3473	12	FSM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	43.8453329687493	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGACCCTCGGGTGAGTC	7681	False	NA	-8	True	AATAAA	-14	NA	35110624	34999005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUST00000114996.8	chr2	-	2614	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	32.625179951441	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068856	5025452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ENSMUST00000114999.8	chr6	+	1455	9	FSM	ENSMUSG00000029848.12	ENSMUST00000114999.8	1455	9	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_3	19.2272592950738	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGTGTCCTGGCA	NA	False	NA	11	True	TATAAA	-16	NA	34897894	34916277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_34897990_34904653_34904852_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
ENSMUST00000115013.2	chrX	+	2910	5	FSM	ENSMUSG00000001173.16	ENSMUST00000115013.2	2910	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.4163333279998	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCGGTCACTACGCAAA	NA	False	NA	-88	True	NA	NA	NA	47049165	47054640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ENSMUST00000115019.2	chr2	+	2933	9	FSM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	174.928378200908	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAAAAGCACCAAG	4773	False	NA	NA	False	NA	NA	NA	4887055	4912948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUST00000115021.8	chr6	+	4041	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	28.0630930241598	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCGTGCATTCTTTG	1257	False	NA	32	True	AATAAA	-20	NA	34686376	34752408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUST00000115028.11	chr16	+	3282	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	15.8688823983111	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAACTTTGTGTTGGCTTTG	NA	False	NA	NA	False	AAAAAG	-17	NA	33650034	33769708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ENSMUST00000115032.8	chr1	+	2177	7	FSM	ENSMUSG00000037447.17	ENSMUST00000115032.8	4640	7	0	2463	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.46572158042361	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGGTGTACAGCACT	NA	False	NA	NA	False	AATAAA	-25	NA	36346834	36359609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36346918_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
ENSMUST00000115041.2	chr5	-	1399	9	FSM	ENSMUSG00000028959.15	ENSMUST00000115041.2	1399	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	414.137186660411	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGCTAAGTCTTGTTTC	NA	False	NA	-8	True	NA	NA	NA	24650206	24646040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24650063
ENSMUST00000115056.2	chrX	-	3495	2	FSM	ENSMUSG00000045284.10	ENSMUST00000115056.2	3495	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCTCTGTTTTTCTTTA	NA	False	NA	-5	True	AATAAA	-40	NA	43879038	43875446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_43877171_43877267
ENSMUST00000115068.10	chr9	-	5943	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGACATATGCTTATTC	NA	False	NA	NA	False	AATAAA	-17	NA	37167034	37138880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ENSMUST00000115068.10-1	chr9	-	2888	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	324	2731	0	0	multi-exon	FALSE	canonical	3	62	junction_1	7.12469267230106	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTGCCTGGTTCTCACT	NA	False	NA	-3	True	AATAAA	-10	NA	37166710	37141611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ENSMUST00000115072.8	chrX	+	5955	33	FSM	ENSMUSG00000025862.15	ENSMUST00000115072.8	5955	33	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	32.1178858854377	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTGTATGCTTTATC	NA	False	NA	9	True	AATAAA	-12	NA	41238288	41366052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ENSMUST00000115073.9	chrX	+	6171	34	FSM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	38.2930798352529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTATCTCTTGTAATC	NA	False	NA	19	True	AATAAA	-22	NA	41238193	41366062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ENSMUST00000115074.6	chr5	+	1657	10	FSM	ENSMUSG00000028973.19	ENSMUST00000115074.6	1657	10	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_9	57.8772647745017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAACCACGTCAGGAGTG	NA	False	NA	NA	False	NA	NA	NA	24599393	24608975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24608625
ENSMUST00000115078.8	chr16	+	500	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	3609.33805392346	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCACATCTGTCC	NA	False	NA	10	True	AATAAA	-25	NA	32876896	32880535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000115079.8	chr16	+	510	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	0	0	0	0	multi-exon	FALSE	canonical	3	3184	junction_1	2675.04705566089	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTCCTAAATTGAGTT	NA	False	NA	21	True	AATAAA	-36	NA	32876835	32880546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUST00000115086.13	chr9	-	2220	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_2	34.4551882885582	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708689	36690454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ENSMUST00000115091.2	chr6	-	1363	6	FSM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_1	31.2089730686545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAATTATTAGTTTCTG	NA	False	NA	-12	True	AATAAA	-16	NA	33037152	32828377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUST00000115094.8	chrX	+	6542	8	FSM	ENSMUSG00000025860.16	ENSMUST00000115094.8	6542	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	28.7345344383332	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTATCTTCTTTGTAT	NA	False	NA	18	True	AATAAA	-14	NA	41156712	41198533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_41156934_41157233_41157360_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ENSMUST00000115095.9	chrX	+	6670	7	FSM	ENSMUSG00000025860.16	ENSMUST00000115095.9	6670	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	35.08283847632	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTATCTTCTTTGTAT	NA	False	NA	18	True	AATAAA	-14	NA	41157274	41198533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_41157750_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ENSMUST00000115099.9	chr2	+	4149	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_6	7.31785627135183	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTATTCTGATTCA	886	False	NA	NA	False	AATAAA	-20	NA	3119418	3228843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
ENSMUST00000115110.5	chr9	-	1973	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	23.2808934536456	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAACCTTGTTTTA	NA	False	NA	51	True	ATTAAA	-17	NA	35481694	35472115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
ENSMUST00000115118.8	chrX	-	3344	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	0	0	0	0	multi-exon	FALSE	non_canonical	3	600	junction_22	211.248653964121	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	NA	False	NA	-28	True	AATAAA	-20	NA	37665073	37622150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ENSMUST00000115123.9	chr16	+	4226	15	FSM	ENSMUSG00000022791.20	ENSMUST00000115123.9	4226	15	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	34.8270508281674	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32463643	32502311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ENSMUST00000115124.9	chr16	+	4516	16	FSM	ENSMUSG00000022791.20	ENSMUST00000115124.9	4516	16	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_11	42.4157203561761	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32463398	32502311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32497486_32497532_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ENSMUST00000115125.8	chr16	+	4313	14	FSM	ENSMUSG00000022791.20	ENSMUST00000115125.8	4313	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	42.5358880846272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCGTGCCCGCCTGTT	NA	False	NA	26	True	AATAAA	-22	NA	32463460	32502311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499969_32500098_32501502
ENSMUST00000115151.5	chr16	+	3321	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	0	6992	0	-1140	multi-exon	FALSE	canonical	3	131	junction_8	18.7480665669823	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTGAGTCAAAGTTCT	8252	False	NA	NA	False	NA	NA	NA	32151074	32205573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ENSMUST00000115154.11	chr17	-	2249	11	FSM	ENSMUSG00000035521.14	ENSMUST00000115154.11	2249	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	52.1813184961821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATGTTTTATATCTA	NA	False	NA	NA	False	ATTAAA	-22	NA	25459098	25452304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454455_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUST00000115157.8	chr6	-	2273	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	253.514963532123	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	2	True	NA	-18	True	ATTAAA	-16	NA	30509717	30482413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508842_30509683
ENSMUST00000115160.10	chr6	-	3485	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGGTGAAATCATTTGAA	NA	False	NA	-9	True	AATAAA	-19	NA	30509782	30481226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ENSMUST00000115160.10-0	chr6	-	2264	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	34	1187	0	0	multi-exon	FALSE	canonical	3	776	junction_14	62.8738614129878	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	-1	True	NA	-18	True	ATTAAA	-16	NA	30509748	30482413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ENSMUST00000115161.8	chr1	-	2231	6	FSM	ENSMUSG00000042182.17	ENSMUST00000115161.8	2231	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.9565881421081	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTTTCTTATGGTTCAC	NA	False	NA	2	True	AATAAA	-23	NA	33946849	33891132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33946646
ENSMUST00000115162.2	chrX	-	779	4	FSM	ENSMUSG00000079627.3	ENSMUST00000115162.2	779	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	11.2644968324772	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACATTTGTTTTGTGC	9229	False	NA	NA	False	AATAAA	-12	NA	36854930	36850649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36850876_36852672_36852719_36854261_36854674_36854835
ENSMUST00000115165.10	chr16	-	2389	2	FSM	ENSMUSG00000052384.15	ENSMUST00000115165.10	2389	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAAATGCATCTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	31984375	31961612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31963824_31984197
ENSMUST00000115168.9	chr16	+	1718	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	4.96655480858378	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTTTTCTTCAGTCTG	6492	False	NA	26	True	AATAAA	-26	NA	31918617	31926887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
ENSMUST00000115181.9	chr17	-	3530	21	FSM	ENSMUSG00000024170.16	ENSMUST00000115181.9	3530	21	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_18	13.9207578816672	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTTCTGTGGTTCTTA	NA	False	NA	-1	True	AATAAA	-21	NA	25334941	25318543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ENSMUST00000115190.11	chrX	+	762	4	FSM	ENSMUSG00000079637.11	ENSMUST00000115190.11	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	17.9133717900592	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36635332	36640032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36635407_36635568_36635981_36637508_36637555_36639802
ENSMUST00000115194.5	chrX	+	925	4	FSM	ENSMUSG00000079639.5	ENSMUST00000115194.5	925	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTCATGTGTCTTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	36528990	36533785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36529231_36529420_36529827_36532233_36532280_36533552
ENSMUST00000115195.8	chr5	-	1994	17	FSM	ENSMUSG00000029014.15	ENSMUST00000115195.8	1994	17	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_16	257.325297228527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTTTCACTTGGAATT	NA	False	NA	-12	True	AATAAA	-15	NA	21990214	21962279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988147_21989986
ENSMUST00000115206.8	chr6	+	1879	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115206.8	1879	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_11	119.561388499108	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGGTTTGGGCTTTGG	15	True	NA	7	True	AATAAA	-23	NA	30048029	30144859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ENSMUST00000115210.2	chrX	-	883	5	FSM	ENSMUSG00000071773.5	ENSMUST00000115210.2	883	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.9549797317545	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTGAATTCTCGACATGT	6717	False	NA	-23	True	AATAAA	-1	NA	36485911	36477456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36477701_36479202_36479249_36481305_36481649_36481811_36481923_36485772
ENSMUST00000115211.8	chr6	+	3295	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115211.8	3295	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_11	122.448774919714	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTATGTTCTTTTCT	-14	True	NA	69	True	TATAAA	-12	NA	30048000	30153179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ENSMUST00000115212.8	chr6	+	3584	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_11	130.142642658033	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGCCCCTCTCTCTA	-28	True	NA	NA	False	AATAAA	-18	NA	30047986	30153457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ENSMUST00000115217.8	chr5	-	3954	5	FSM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	48.8108594474631	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGATACCTGAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	21906392	21867898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21905972
ENSMUST00000115222.10	chr9	+	8861	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTGTTGTTGTCATTG	NA	False	NA	83	True	ATTAAA	-28	NA	30941941	30987181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ENSMUST00000115222.10-0	chr9	+	3437	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	-228	5652	-226	0	multi-exon	FALSE	canonical	3	240	junction_5	55.0694107468021	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAACTTTTGTGTAAT	NA	False	NA	32	True	ATTAAA	-35	NA	30941713	30981529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ENSMUST00000115227.10	chr16	+	3122	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCAGAGTGGCTTGGAAT	NA	False	NA	17	True	AATAAA	-17	NA	31247565	31277719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ENSMUST00000115227.10-0	chr16	+	1674	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	44	1404	0	0	multi-exon	FALSE	canonical	3	475	junction_4	18.4812217008388	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGTGCATGAAA	NA	False	NA	25	True	AGTAAA	-15	NA	31247609	31276315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ENSMUST00000115231.4	chrX	-	376	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	236	0	0	0	multi-exon	FALSE	canonical	3	12849	junction_1	35	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACCCGATAAGGCTTC	NA	False	NA	-5	True	TATAAA	-17	NA	36348819	36346172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36346403_36347637_36347742_36348777
ENSMUST00000115233.2	chr16	-	958	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_1	34.2746261832277	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGCTTTGTTTTTTG	NA	False	NA	73	True	ATTAAA	-38	NA	31093810	31076792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ENSMUST00000115239.10	chrX	-	1845	10	FSM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	15.8869462681912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGGGCAGGGGCCATT	NA	False	NA	NA	False	AATAAA	-27	NA	36253309	36178683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36179001_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUST00000115242.9	chr6	+	5152	17	FSM	ENSMUSG00000029772.18	ENSMUST00000115242.9	5152	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	29.2814334305887	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCCTGAGAATACCA	-17	True	NA	9	True	AATAAA	-17	NA	29768490	29912309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29768906_29863138_29863251_29870566_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ENSMUST00000115246.9	chr18	+	1484	10	FSM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTATTGTAACTTAT	472	False	NA	25	True	ATTAAA	-16	NA	61688388	61715187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61715106
ENSMUST00000115248.10	chrX	-	3340	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	34.0999348321306	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTGTTTTGATCATTT	NA	False	NA	NA	False	AATAAA	-28	NA	36127899	36112195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ENSMUST00000115250.4	chr6	+	1977	8	FSM	ENSMUSG00000001763.15	ENSMUST00000115250.4	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	7.38172039015075	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAGCTGTCCTACATCAA	5	True	NA	7	True	AATAAA	-16	NA	29694232	29718556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29694544_29709939_29709998_29710588_29710714_29711014_29711090_29713437_29713534_29716703_29716833_29717188_29717351_29717535
ENSMUST00000115251.8	chr6	-	3989	23	FSM	ENSMUSG00000012535.15	ENSMUST00000115251.8	3989	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	140.778774050425	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	235	False	NA	-2	True	TTTAAA	-5	NA	29609606	29540825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554980_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUST00000115259.3	chr5	+	831	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	316	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	0	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCACATGCCTCTTAC	NA	False	NA	8	True	AATAAA	-18	NA	21087504	21091868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_21087654_21091186
ENSMUST00000115262.9	chr17	+	886	5	FSM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	30.3685692781204	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTTTGTTGTCTCATG	NA	False	NA	19	True	AATAAA	-19	NA	24955615	24961752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879_24960912_24961283
ENSMUST00000115266.8	chrX	+	6047	49	FSM	ENSMUSG00000031093.15	ENSMUST00000115266.8	6047	49	0	0	0	0	multi-exon	FALSE	canonical	1	53	junction_48	23.2696209770737	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAATTCGAAGTGAAG	NA	False	NA	2	True	AATAAA	-14	NA	35211049	35340209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ENSMUST00000115313.8	chrX	-	3251	9	FSM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	0	0	0	0	multi-exon	TRUE	canonical	3	241	junction_8	283.721694623446	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGTTACTCCTCAGTTT	NA	False	NA	-8	True	AATAAA	-29	NA	23231321	23085509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732_23227824_23231194
ENSMUST00000115315.3	chr9	-	1349	5	FSM	ENSMUSG00000001348.16	ENSMUST00000115315.3	1349	5	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_4	98.7734149455206	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGGTGTGTCATCAAG	4541	False	NA	-23	True	AATAAA	-17	NA	22041894	22038026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22041818
ENSMUST00000115316.9	chrX	-	3064	7	FSM	ENSMUSG00000036782.14	ENSMUST00000115316.9	3064	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	407.106626764482	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23133041	23085524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23132923
ENSMUST00000115317.9	chrX	-	3216	7	FSM	ENSMUSG00000036782.14	ENSMUST00000115317.9	3216	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	405.30317870289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23151068	23085524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23150798
ENSMUST00000115321.9	chr6	-	2699	6	FSM	ENSMUSG00000039841.15	ENSMUST00000115321.9	2699	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	13.7927517196533	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATATCATATATTGTCT	3	True	NA	NA	False	NA	NA	NA	28261922	28241447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261478
ENSMUST00000115330.8	chr6	-	3151	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_8	16.939542404853	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATCTTCCAGATACTT	0	True	NA	NA	False	AATATA	-22	NA	25809225	25743735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ENSMUST00000115330.8-0	chr6	-	2943	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	0	208	0	-208	multi-exon	FALSE	canonical	3	94	junction_8	16.939542404853	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTGTCTGTGTGT	0	True	NA	-6	True	AATAAA	-14	NA	25809225	25743943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ENSMUST00000115331.10	chr9	+	1983	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_11	154.653737577573	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGGCTGTTTTTTA	NA	False	NA	18	True	AATAAA	-14	NA	21914361	21925516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUST00000115333.9	chrX	-	3130	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115333.9	3130	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.753164303473	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATTCCTTTAATGGT	3285	False	NA	-1	True	TTTAAA	-5	NA	20928242	20895177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926768_20928132
ENSMUST00000115334.8	chrX	-	3160	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115334.8	3160	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	3.67423461417477	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATATTGTATTCCTTTAA	3236	False	NA	-5	True	TTTAAA	-1	NA	20928291	20895181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926797_20928176
ENSMUST00000115342.10	chrX	+	883	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	90.9382207875215	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATTTCTGTATAGTGT	NA	False	NA	16	True	AATAAA	-17	NA	20736404	20740972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUST00000115345.8	chrX	-	3261	13	FSM	ENSMUSG00000037217.16	ENSMUST00000115345.8	3261	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	11.6198465279595	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCTTCTTGGTAAAG	NA	False	NA	2	True	AATAAA	-21	NA	20787243	20726749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20727811_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ENSMUST00000115351.10	chr9	-	3835	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATATTGCTTAATTT	2233	False	NA	NA	False	AATAAA	-25	NA	21829488	21818786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ENSMUST00000115351.10-0	chr9	-	2248	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	53	1534	0	-383	multi-exon	FALSE	canonical	3	21	junction_4	8.45576726264388	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATTATGTTCTTAAGAT	2286	False	NA	-7	True	ATTAAA	-14	NA	21829435	21820320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ENSMUST00000115352.10	chr1	-	960	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	0	0	0	multi-exon	TRUE	canonical	3	1066	junction_3	717.825574603995	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGTTTTGTTTATT	NA	False	NA	-2	True	TATAAA	-20	NA	16727266	16712990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ENSMUST00000115352.10-0	chr1	-	483	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	477	0	-53	multi-exon	FALSE	canonical	3	1066	junction_3	717.825574603995	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTAGTTCAGTTAGTA	NA	False	NA	-1	True	AATAAA	-40	NA	16727266	16713467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ENSMUST00000115365.3	chr5	+	1040	5	FSM	ENSMUSG00000079659.6	ENSMUST00000115365.3	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	62.4019230472908	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTTTTTTCCTCCTTT	NA	False	NA	10	True	AATAAA	-21	NA	9150746	9169045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_9150860_9151216_9151396_9166479_9166531_9167458_9167564_9168453
ENSMUST00000115366.3	chr18	+	6520	27	FSM	ENSMUSG00000024597.12	ENSMUST00000115366.3	6520	27	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_7	17.8975139591274	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCCTTTACCTGTCAT	NA	False	NA	25	True	AATAAA	-32	NA	58011749	58079893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ENSMUST00000115371.9	chr17	+	1646	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	362.779738807019	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	884	False	NA	NA	False	AATAAA	-18	NA	24633619	24644869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000115378.2	chr5	-	3772	11	FSM	ENSMUSG00000040570.15	ENSMUST00000115378.2	1891	11	52	-1933	52	0	multi-exon	FALSE	canonical	3	15	junction_2	15.6920361967464	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGTCTTTTTCCTTGA	NA	False	NA	1	True	ATTAAA	-19	NA	8672900	8540333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_8542590_8544783_8544906_8562260_8562408_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
ENSMUST00000115379.2	chr16	-	3078	15	FSM	ENSMUSG00000033581.18	ENSMUST00000115379.2	3078	15	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_2	83.5777775366107	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCACCTTGCTCTTGTGT	4122	False	NA	-5	True	AATAAA	-24	NA	21980200	21878209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995
ENSMUST00000115384.9	chrX	+	4866	13	FSM	ENSMUSG00000037315.16	ENSMUST00000115384.9	4866	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	19.6800801714717	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	9	True	ATTAAA	-17	NA	20291926	20386178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20292070_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ENSMUST00000115387.8	chrX	+	4498	6	FSM	ENSMUSG00000060090.17	ENSMUST00000115387.8	4498	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	195.012820091398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGATGTCTATACTT	NA	False	NA	3	True	AATAAA	-18	NA	20230797	20267092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20231068_20231278_20231438_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ENSMUST00000115390.5	chr17	-	3039	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	62	1032	0	-1032	multi-exon	FALSE	canonical	3	665	junction_16	77.1289504660863	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8737	False	NA	-4	True	AATAAA	-19	NA	24470321	24442203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ENSMUST00000115394.8	chr9	+	3320	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115394.8	3320	15	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_5	69.6438461468237	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458218	21500763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146
ENSMUST00000115395.10	chr9	+	3152	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115395.10	3152	15	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_14	283.604972827073	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAGGGTCCAAGAATC	NA	False	NA	40	True	AATAAA	-42	NA	21458208	21500783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499344
ENSMUST00000115404.11	chr9	+	3455	21	FSM	ENSMUSG00000033335.18	ENSMUST00000115404.11	3455	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	263.524932406784	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTACTGGTGGCTACG	5910	False	NA	4	True	AATAAA	-14	NA	21336271	21418420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21401205_21401218_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUST00000115414.3	chr9	+	3606	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_17	371.198684895057	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTGAGTCTTCATTCA	NA	False	NA	32	True	AATACA	-21	NA	21279298	21313099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ENSMUST00000115424.9	chr5	-	3285	5	FSM	ENSMUSG00000015653.14	ENSMUST00000115424.9	3285	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.5797456254091	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTATCTTTCCCACCAT	5291	False	NA	NA	False	AATAAA	-19	NA	5744060	5721729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5743957
ENSMUST00000115436.9	chrX	-	4537	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	-194	3917	0	334	multi-exon	FALSE	canonical	2	3	junction_8	34.3371508799952	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTAAATGCCTTTGGG	NA	False	NA	NA	False	AATATA	-18	NA	13712974	13387235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUST00000115437.4	chr16	-	2416	6	FSM	ENSMUSG00000022847.16	ENSMUST00000115437.4	2416	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.98999374217527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACCCGAGTCTCAGCTT	NA	False	NA	NA	False	AATGAA	-24	NA	20553261	20543203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20553011
ENSMUST00000115438.10	chrX	-	4668	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	-219	3917	-62	334	multi-exon	FALSE	canonical	3	85	junction_8	22.9097708412808	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTAAATGCCTTTGGG	NA	False	NA	NA	False	AATATA	-18	NA	13713036	13387235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUST00000115441.9	chr5	-	2972	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_5	43.7924397331066	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	GATAAA	-19	NA	5609538	5587453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ENSMUST00000115443.8	chr6	+	6809	22	FSM	ENSMUSG00000009376.16	ENSMUST00000115443.8	6809	22	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_15	4.2527835355745	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCTGTAGCTAGTCCTG	19	True	NA	NA	False	AATAAA	-27	NA	17463798	17573979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17549030_17549172_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571370_17571508_17571611
ENSMUST00000115445.8	chr5	-	3477	4	FSM	ENSMUSG00000046798.15	ENSMUST00000115445.8	3477	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	28.2842712474619	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGCTTGTACATACGCC	NA	False	NA	NA	False	AATAAA	-18	NA	5564730	5555222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564627
ENSMUST00000115446.8	chr5	-	3519	4	FSM	ENSMUSG00000046798.15	ENSMUST00000115446.8	3519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.5841028929991	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564825	5555110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5558455_5561070_5561123_5563161_5563224_5564764
ENSMUST00000115461.8	chr16	+	5507	32	FSM	ENSMUSG00000045983.17	ENSMUST00000115461.8	5507	32	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_13	284.360933460748	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCCTCTTTACTGA	NA	False	NA	16	True	ATTAAA	-16	NA	20492169	20511633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUST00000115467.11	chr6	+	2440	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	5.93717104351896	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTCTTTCTATGTC	-34	True	NA	NA	False	AATAAA	-15	NA	17065147	17105822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ENSMUST00000115468.9	chr1	-	4982	15	FSM	ENSMUSG00000025912.17	ENSMUST00000115468.9	2493	15	-367	-2122	-182	0	multi-exon	FALSE	canonical	1	5	junction_9	10.6999904634709	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTGGCTTGGCATTGC	NA	False	NA	-8	True	AATAAA	-12	NA	9770616	9737639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_9740238_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746561_9748496_9748731_9752009_9752115_9753321_9753394_9755860_9756036_9757785_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ENSMUST00000115487.3	chr9	-	3470	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	41.8140725912541	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003304	20985453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ENSMUST00000115489.8	chr17	-	1083	13	FSM	ENSMUSG00000041319.15	ENSMUST00000115489.8	1083	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	139.168063865242	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATTTCAGGAGCTAGA	1031	False	NA	NA	False	NA	NA	NA	23892579	23887770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892492
ENSMUST00000115490.9	chr17	-	1431	14	FSM	ENSMUSG00000041319.15	ENSMUST00000115490.9	1431	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	116.170706876108	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTGCATTTTATTCC	765	False	NA	-22	True	AATAAA	-13	NA	23892845	23887592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
ENSMUST00000115494.3	chr9	-	1010	5	FSM	ENSMUSG00000079681.4	ENSMUST00000115494.3	1010	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTTTAATTATGTTTT	921	False	NA	NA	False	AATAAA	-21	NA	20978389	20973688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20974014_20974189_20974284_20974609_20974693_20977319_20977674_20978235
ENSMUST00000115509.8	chr17	+	2368	4	FSM	ENSMUSG00000023902.19	ENSMUST00000115509.8	2368	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	114.030210422014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTCCTGATTTTTT	879	False	NA	28	True	AGTAAA	-12	NA	23819829	23829986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_23819934_23824478_23824939_23827081_23827140_23828240
ENSMUST00000115510.8	chr6	+	3353	17	FSM	ENSMUSG00000029629.18	ENSMUST00000115510.8	3353	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	37.0717210282986	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATTGTATGATTTA	-26	True	NA	NA	False	AATAAA	-17	NA	11925879	12008012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
ENSMUST00000115511.9	chr6	+	3336	18	FSM	ENSMUSG00000029629.18	ENSMUST00000115511.9	3336	18	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	28.335117658721	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATTCATATTTTTTT	9	True	NA	12	True	AATAAA	-23	NA	11925914	12081204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
ENSMUST00000115512.9	chrX	-	6887	14	FSM	ENSMUSG00000040363.16	ENSMUST00000115512.9	6887	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	50.3691696818388	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAGTACTTTGCATC	NA	False	NA	-6	True	AATAAA	-19	NA	11946792	11902978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ENSMUST00000115513.9	chrX	-	6941	15	FSM	ENSMUSG00000040363.16	ENSMUST00000115513.9	6941	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	42.398077064597	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAGTACTTTGCATC	NA	False	NA	-6	True	AATAAA	-19	NA	11946792	11902978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ENSMUST00000115516.11	chr17	-	2104	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	5.98665181883831	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4823	False	NA	0	True	ATTAAA	-21	NA	23805206	23794817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ENSMUST00000115520.8	chr6	-	1876	15	FSM	ENSMUSG00000062995.13	ENSMUST00000115520.8	1876	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	25.1992063367083	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTCACTCCTGTTTGGT	105	False	NA	-1	True	AATAAA	-35	NA	8778439	8630526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8775783_8775931_8778372
ENSMUST00000115522.10	chr16	+	1134	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	23	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTGCTTTATGCTTCTG	5899	False	NA	12	True	NA	NA	NA	20430342	20437761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20430571_20436375_20436660_20437139
ENSMUST00000115524.8	chrX	+	2022	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGGACAAGTGTG	1479	False	NA	NA	False	AATAAA	-15	NA	10583628	10585929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_10583944_10584222
ENSMUST00000115527.8	chr5	+	1491	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATGAGAAAGCCCCCAA	NA	False	NA	NA	False	AATGAA	-22	NA	3593837	3619740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ENSMUST00000115527.8-0	chr5	+	1994	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	-5	-498	0	0	multi-exon	FALSE	canonical	0	0	junction_10	59.9796632201282	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTCTTTGTGTATC	NA	False	NA	19	True	AGTAAA	-15	NA	3593832	3620238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ENSMUST00000115529.8	chr1	+	2336	8	FSM	ENSMUSG00000025903.15	ENSMUST00000115529.8	930	8	-19	-1387	-4	0	multi-exon	FALSE	canonical	3	36	junction_6	273.277312991617	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878114	4916962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4911178_4911356_4915185
ENSMUST00000115533.8	chrX	-	2739	17	FSM	ENSMUSG00000031174.18	ENSMUST00000115533.8	2739	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	23.3939595569027	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGTTATTGTACTTTG	NA	False	NA	NA	False	AATGAA	-20	NA	10083159	10024610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_10025089_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ENSMUST00000115534.8	chrX	-	2795	17	FSM	ENSMUSG00000031174.18	ENSMUST00000115534.8	2795	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	30.7301129797793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCTTGGAAGTATTT	NA	False	NA	0	True	AATAAA	-32	NA	10082692	10024454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082454
ENSMUST00000115535.3	chr17	-	2784	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	24.8997991959775	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580381	22556969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
ENSMUST00000115538.5	chr1	-	910	5	FSM	ENSMUSG00000033845.14	ENSMUST00000115538.5	910	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	946.266446356416	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGCTCAGGTCTTTTG	1620	False	NA	-10	True	ATTAAA	-22	NA	4855962	4846599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_4847025_4847747_4847872_4852790_4852830_4854173_4854329_4855795
ENSMUST00000115542.8	chr6	-	2016	12	FSM	ENSMUSG00000029752.13	ENSMUST00000115542.8	2016	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2480.9262599759	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	14	True	NA	-9	True	AATAAA	-17	NA	7692871	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7692710
ENSMUST00000115557.10	chr9	+	2609	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	150	10215	-50	0	multi-exon	FALSE	canonical	3	29	junction_1	3.8262252939418	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTGAGTTTCATGATAT	-8	True	NA	25	True	ATTAAA	-25	NA	20492770	20506490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
ENSMUST00000115560.4	chr16	+	6112	31	FSM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_10	25.0014444027185	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959816	20051323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ENSMUST00000115571.8	chr18	-	6327	8	FSM	ENSMUSG00000024431.16	ENSMUST00000115571.8	6327	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	7.56738436465659	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTTTTCATAGAACTT	NA	False	NA	-13	True	AATAAA	-30	NA	39620298	39543599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050
ENSMUST00000115579.8	chr6	-	1696	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	4.92848861214064	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGTAAAATTTCTTTC	9868	False	NA	NA	False	AATAAA	-36	NA	4747204	4674349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUST00000115595.8	chrX	-	1656	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	23.6231995198694	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCACGTTGCTTACTT	NA	False	NA	-14	True	AATAAA	-21	NA	8118634	8106658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUST00000115615.9	chrX	-	1183	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	305.254766092558	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGATAATGCTTTTTC	6535	False	NA	-9	True	ATTAAA	-23	NA	8011962	8008599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115616.8	chrX	-	1225	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_2	255.122192945524	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATCAATACTGATAATG	6485	False	NA	-16	True	ATTAAA	-16	NA	8012012	8008606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115617.10	chrX	-	1152	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	339.486213105759	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATCAATACTGATAATG	6562	False	NA	-16	True	ATTAAA	-16	NA	8011935	8008606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115621.9	chrX	-	1338	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATAATGCTTTTTCCT	6378	False	NA	-7	True	ATTAAA	-25	NA	8012119	8008597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115621.9-0	chrX	-	1068	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	157	113	0	0	multi-exon	FALSE	canonical	3	764	junction_2	192.247597875471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTGAATGTCATTTT	6535	False	NA	NA	False	ATTAAA	-38	NA	8011962	8008710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUST00000115628.10	chr16	-	1622	9	FSM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	57.8273291792038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTGTTGGCTTTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	18161906	18118690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ENSMUST00000115629.9	chr18	-	5416	26	FSM	ENSMUSG00000024456.17	ENSMUST00000115629.9	5416	26	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	21.7586764303346	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCTCCCTCTAGCCTCC	NA	False	NA	-24	True	AATAAA	-11	NA	38039469	37976657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986762_37987532_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993576_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440
ENSMUST00000115633.3	chr16	-	3436	12	FSM	ENSMUSG00000022718.13	ENSMUST00000115633.3	3436	12	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	19.9238218644403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATACTCTTCCGAGATTG	NA	False	NA	-14	True	AATAAA	-18	NA	18102399	18072803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987
ENSMUST00000115637.8	chrX	-	2778	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_5	15.551205741035	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	7355	False	NA	NA	False	NA	NA	NA	7940497	7927673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ENSMUST00000115638.10	chrX	-	2711	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	141	264	2	0	multi-exon	FALSE	canonical	3	87	junction_5	11.3947356265953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGAGATTTGGGAG	6994	False	NA	NA	False	NA	NA	NA	7940858	7927673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ENSMUST00000115640.8	chr16	+	2367	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	22.0168980933485	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	269	False	NA	8	True	AATAAA	-22	NA	18066746	18071366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUST00000115642.8	chrX	-	4069	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_28	46.7627942767691	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGCTTTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	7814128	7796358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ENSMUST00000115645.10	chr16	-	1085	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	0	0	0	0	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	7133	False	NA	-1	True	AATAAA	-22	NA	18066596	18057647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUST00000115645.10-0	chr16	-	890	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	0	195	0	-177	multi-exon	FALSE	canonical	3	10558	junction_4	1553.51498222579	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCAGGTTGTTTTTTT	7133	False	NA	29	True	TATAAA	-13	NA	18066596	18057842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUST00000115649.4	chr17	+	1515	1	FSM	ENSMUSG00000060417.7	ENSMUST00000115649.4	1515	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGGAAGGGTGTCAGG	NA	False	NA	NA	False	NA	NA	NA	13737016	13738531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13737000_13738500
ENSMUST00000115655.8	chrX	-	1148	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_6	78.4950458450864	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGTTGTTTGTAAACA	586	False	NA	-65	True	NA	NA	NA	7765218	7760821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
ENSMUST00000115660.12	chrX	+	3094	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGCACTCAAGCC	NA	False	NA	NA	False	NA	NA	NA	7750266	7760731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
ENSMUST00000115660.12-0	chrX	+	2324	4	FSM	ENSMUSG00000031156.19	ENSMUST00000115660.12	3094	4	305	465	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9.0921211313239	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGTGTAGCTTTCTGA	NA	False	NA	6	True	AATAAA	-18	NA	7750571	7760266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378
ENSMUST00000115665.2	chrX	+	3821	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115665.2	3821	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	179.488161169477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATCTTGTTTGTGTGT	NA	False	NA	16	True	AATAAA	-25	NA	7708354	7742859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738421_7739792_7739995_7740078_7740193_7740471
ENSMUST00000115666.8	chrX	+	2471	9	FSM	ENSMUSG00000031154.16	ENSMUST00000115666.8	2471	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	127.394073645519	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAACAAATCAAAAAGAATA	NA	False	NA	NA	False	ATTAAA	-21	NA	7708094	7741099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
ENSMUST00000115668.10	chrX	+	2543	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	125.359138399428	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708320	7741529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ENSMUST00000115675.9	chrX	+	3015	26	FSM	ENSMUSG00000031153.17	ENSMUST00000115675.9	3015	26	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	17.6906755099968	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTCTGGTCTCATTCT	3260	False	NA	7	True	NA	NA	NA	7656233	7686802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUST00000115677.8	chrX	+	2943	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115677.8	2943	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	93.7669820010234	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7630197	7641440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7630268_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000115679.8	chrX	+	3239	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115679.8	3239	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	88.3978101510788	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628914	7641440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUST00000115689.10	chrX	+	1568	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115689.10	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	58.911883351324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGGGTGGGGCGTGCTT	4038	False	NA	17	True	AATAAA	-30	NA	7588487	7594440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7588618_7590091_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUST00000115713.9	chr18	-	3056	10	FSM	ENSMUSG00000060275.15	ENSMUST00000115713.9	3056	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.45452467048606	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGAGAGATGGGCCAA	NA	False	NA	NA	False	NA	NA	NA	36330433	36150704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36165388_36165466_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ENSMUST00000115728.5	chr18	-	1855	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	92	352	0	0	multi-exon	TRUE	canonical	2	5	junction_4	3.35638289270592	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGAATGGCCTCTTCC	NA	False	NA	NA	False	AATAAA	-17	NA	35873515	35867085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
ENSMUST00000115731.10	chr16	+	1747	8	FSM	ENSMUSG00000063358.18	ENSMUST00000115731.10	1747	8	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_5	32.3728281124773	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACATTTAAAAATA	NA	False	NA	NA	False	AATATA	-5	NA	16801430	16856904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177
ENSMUST00000115733.3	chr9	+	2243	8	FSM	ENSMUSG00000041624.11	ENSMUST00000115733.3	2243	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.25642526870234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAGCACAAGCCCAGA	24	False	NA	NA	False	NA	NA	NA	3532777	3894736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395_3759882_3797237_3797382_3865357_3865513_3894503
ENSMUST00000115742.9	chrX	-	3066	4	FSM	ENSMUSG00000039556.17	ENSMUST00000115742.9	3066	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	1.4142135623731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCTGGGAGCCTGT	NA	False	NA	NA	False	AATATA	-21	NA	7440487	7425190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7427123_7430100_7430181_7430474_7430528_7439486
ENSMUST00000115744.2	chrX	-	3240	1	FSM	ENSMUSG00000046269.18	ENSMUST00000115744.2	3240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTTTATTTGGACTG	NA	False	NA	NA	False	NA	NA	NA	7242069	7238829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7238800_7242100
ENSMUST00000115749.3	chr16	-	3893	20	FSM	ENSMUSG00000022789.16	ENSMUST00000115749.3	3893	20	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_19	330.475926430562	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176397	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
ENSMUST00000115765.2	chr18	-	3869	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_20	102.255794456842	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	34757654	34734227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUST00000115776.2	chr16	-	1048	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	17	171	0	-171	multi-exon	FALSE	canonical	3	117	junction_1	698.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGTGCTATTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	15412354	15373539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_15374408_15398922_15399072_15412323
ENSMUST00000115777.10	chr16	-	4207	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTTGTGTGTGCCTGTG	NA	False	NA	-4	True	AATAAA	-17	NA	15412388	15370540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ENSMUST00000115777.10-0	chr16	-	1174	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	34	2999	0	-171	multi-exon	FALSE	canonical	3	110	junction_1	627.165050046636	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGACTGTGCTATTTCTG	NA	False	NA	NA	False	AATAAA	-17	NA	15412354	15373539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ENSMUST00000115788.8	chr17	+	3498	23	FSM	ENSMUSG00000023805.18	ENSMUST00000115788.8	3498	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	4.99586605964876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGCCTAGCAGAACTCT	NA	False	NA	NA	False	AATAAA	-15	NA	6040337	6094565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6094228
ENSMUST00000115795.9	chr16	+	2335	9	FSM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	91.5818452260054	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAAAAGTGTTTTGTG	NA	False	NA	86	True	AATAAA	-8	NA	13981208	14010782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
ENSMUST00000115804.9	chr16	-	2880	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.2457020469238	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCTTTTGTTGCTGT	9804	False	NA	-17	True	NA	NA	NA	13720885	13652023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUST00000115808.4	chr18	+	3385	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	12.315578321287	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTAAACTTCACCCCT	6921	False	NA	NA	False	TTTAAA	-26	NA	31892932	31915796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUST00000115812.10	chr18	+	3257	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_11	21.8495089571063	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCCTTGTTTTCCCTGTC	NA	False	NA	12	True	AGTAAA	-23	NA	30405799	30481179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
ENSMUST00000115817.3	chr18	-	1270	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	313	2576	0	-2576	multi-exon	FALSE	canonical	3	238	junction_5	17.5823459438406	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGTATCGACTAGT	NA	False	NA	-7	True	AATAAA	-19	NA	25301751	25271669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ENSMUST00000115829.4	chr18	-	1592	3	FSM	ENSMUSG00000024274.11	ENSMUST00000115829.4	1592	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTAAGGGTCAGTGGT	7254	False	NA	NA	False	NA	NA	NA	24104844	24097874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24098891_24103988_24104159_24104438
ENSMUST00000115844.3	chr16	-	3292	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_6	120.52477845747	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ENSMUST00000115850.2	chr18	-	3785	15	FSM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	6.38916493537525	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAAAGAGGAAAAAG	6152	False	NA	NA	False	NA	NA	NA	16803126	16722079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16803014
ENSMUST00000115854.4	chr16	+	2505	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_10	58.1896898084188	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501959	4525559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUST00000115869.4	chr18	-	4981	17	FSM	ENSMUSG00000057440.9	ENSMUST00000115869.4	4981	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_16	22.8061635035356	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCTTTCAAGATTATTG	-22	True	NA	NA	False	ATTAAA	-20	NA	7626866	7347958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626732
ENSMUST00000115869.4-0	chr18	-	4822	17	FSM	ENSMUSG00000057440.9	ENSMUST00000115869.4	4981	17	7	152	0	-147	multi-exon	FALSE	canonical	3	19	junction_16	22.8061635035356	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-15	True	NA	NA	False	AATAAA	-17	NA	7626859	7348110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626732
ENSMUST00000115870.9	chr18	-	3817	14	FSM	ENSMUSG00000024240.14	ENSMUST00000115870.9	3817	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	15.1118120655772	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCAGTGGTCTTTGCCTT	NA	False	NA	1	True	AATAAA	-29	NA	6516108	6435950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6515864
ENSMUST00000115979.9	chr8	-	3536	15	FSM	ENSMUSG00000084128.11	ENSMUST00000115979.9	3536	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	4.96929346597888	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGCTCTACATGTTAA	NA	False	NA	NA	False	TATAAA	-19	NA	106863606	106856950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106858216_106858295_106858462_106858737_106858925_106859036_106859236_106859326_106859540_106859640_106859943_106860082_106860126_106860204_106860338_106860410_106860522_106860591_106860647_106860865_106860965_106861241_106861357_106861454_106861569_106862988_106863118_106863201
ENSMUST00000115987.3	chrX	+	360	1	FSM	ENSMUSG00000079871.5	ENSMUST00000115987.3	360	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCATGACTGGGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	12518541	12518901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_12518500_12518900
ENSMUST00000116005.3	chr11	-	431	1	FSM	ENSMUSG00000079889.5	ENSMUST00000116005.3	431	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCTGTGCTCCAAGGTC	NA	False	NA	NA	False	NA	NA	NA	3583442	3583011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3583000_3583400
ENSMUST00000116058.3	chr4	-	393	1	FSM	ENSMUSG00000079942.6	ENSMUST00000116058.3	393	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCACACCCCGGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	125964052	125963659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_125963700_125964100
ENSMUST00000116115.3	chr3	+	425	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATAAAATTTGACAATGG	7664	False	NA	NA	False	AAGAAA	-12	NA	37768888	37769313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37768900_37769300
ENSMUST00000116118.3	chr5	-	459	1	FSM	ENSMUSG00000080002.3	ENSMUST00000116118.3	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAGAAACCAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	149584688	149584229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_149584200_149584700
ENSMUST00000116122.3	chr2	-	438	1	FSM	ENSMUSG00000080006.5	ENSMUST00000116122.3	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATGCTGGGTTAA	NA	False	NA	-47	True	NA	NA	NA	139915389	139914951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_139915000_139915400
ENSMUST00000116133.4	chr1	-	2895	2	FSM	ENSMUSG00000045005.10	ENSMUST00000116133.4	2895	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTTTTTGGACTGTG	NA	False	NA	-60	True	GGGGCT	-43	NA	64776908	64773627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_64776013_64776398
ENSMUST00000116174.3	chr4	-	426	1	FSM	ENSMUSG00000080059.5	ENSMUST00000116174.3	426	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATGCTGGGTTAA	4113	False	NA	NA	False	NA	NA	NA	147906659	147906233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147906200_147906700
ENSMUST00000116183.3	chrX	-	1023	1	FSM	ENSMUSG00000080069.3	ENSMUST00000116183.3	1023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATTAGGTAGCCTCC	NA	False	NA	NA	False	NA	NA	NA	85389451	85388428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_85388400_85389500
ENSMUST00000116191.3	chr1	+	3510	1	FSM	ENSMUSG00000080078.3	ENSMUST00000116191.3	3510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGAGATGGAGCCACCA	NA	False	NA	NA	False	TTTAAA	-35	NA	146601318	146604828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_146601300_146604800
ENSMUST00000116229.2	chr10	-	1994	5	FSM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	30.8332207205151	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGTCTCTGGAACTCCA	NA	False	NA	NA	False	NA	NA	NA	127031596	127026510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
ENSMUST00000116234.9	chr10	+	2080	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_1	68.5466264669531	918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATGTCTTTAGTGTCTT	NA	False	NA	14	True	AATAAA	-23	NA	88566929	88579956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ENSMUST00000116273.9	chr4	-	3008	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_17	208.707545398275	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAATTGTGTGTGTGTG	NA	False	NA	-5	True	AATAAA	-30	NA	136330034	136277850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ENSMUST00000116279.10	chr4	-	1969	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	102.782402298361	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCTTGGTTCATC	NA	False	NA	0	True	ATTAAA	-23	NA	134262698	134252867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ENSMUST00000116280.9	chr7	-	5382	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118455221	118441444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ENSMUST00000116280.9-1	chr7	-	3500	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	314	1568	0	0	multi-exon	FALSE	canonical	0	0	junction_3	263.543639650059	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTATTATTGTTGTTG	NA	False	NA	-10	True	ATTAAA	-17	NA	118454907	118443012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ENSMUST00000116305.8	chr11	+	1827	14	FSM	ENSMUSG00000025156.18	ENSMUST00000116305.8	1827	14	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_1	155.049677093711	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1424	False	NA	2	True	ATTAAA	-19	NA	120675130	120679928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUST00000116324.3	chr7	+	1824	4	FSM	ENSMUSG00000055102.16	ENSMUST00000116324.3	1824	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	15.6914697279198	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGCTGTGCGTGTTGTGT	5574	False	NA	NA	False	NA	NA	NA	43259330	43267342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43259403_43261406_43261534_43261970_43262064_43265810
ENSMUST00000116349.9	chr11	-	3442	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	13.508885964431	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2205	False	NA	-6	True	AATATA	-16	NA	94568341	94554676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ENSMUST00000116354.4	chr7	+	3523	3	FSM	ENSMUSG00000074406.6	ENSMUST00000116354.4	3523	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTTTTGTTTTCATG	2971	False	NA	8	True	AATAAA	-14	NA	4918215	4925001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4918405_4920408_4920516_4921774
ENSMUST00000116358.8	chr11	+	1159	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	67.5763272159711	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGCCTGAGTGCTGTTT	4091	False	NA	11	True	AATAAA	-21	NA	69804875	69807416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUST00000116359.3	chr11	+	3978	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_14	52.8328292942908	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	5272	False	NA	18	True	AATAAA	-18	NA	68906922	68927296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUST00000116363.2	chr11	-	1283	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	11.1579568022107	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCTGTTTGTGTACAAA	NA	False	NA	2	True	CATAAA	-28	NA	66943396	66928866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
ENSMUST00000116365.9	chr2	+	3728	6	FSM	ENSMUSG00000000826.17	ENSMUST00000116365.9	3728	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	67.7642973843897	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAG	7046	False	NA	NA	False	NA	NA	NA	181162318	181194042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
ENSMUST00000116366.9	chr2	+	3666	11	FSM	ENSMUSG00000027582.17	ENSMUST00000116366.9	3666	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	46.2520269826091	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007215	181025421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181023188_181023986_181024108_181024279_181024338_181024408_181024497_181024591_181024954_181025050
ENSMUST00000116371.8	chr11	+	4135	24	FSM	ENSMUSG00000005417.18	ENSMUST00000116371.8	8766	24	0	4631	0	0	multi-exon	FALSE	canonical	3	400	junction_2	48.3490381455828	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCCCCTCTCATTCCT	3585	False	NA	17	True	ATTAAA	-14	NA	59553332	59667049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ENSMUST00000116375.2	chr2	+	3451	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGACGTAAAGGTAGTTT	NA	False	NA	13	True	AATAAA	-20	NA	172212653	172224368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ENSMUST00000116375.2-0	chr2	+	1842	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	244	1365	244	-1365	multi-exon	FALSE	canonical	3	206	junction_1	74.6527963307471	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCCTCCTTCTTCA	NA	False	NA	17	True	AATAAA	-17	NA	172212897	172223003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ENSMUST00000116376.9	chr11	+	3016	7	FSM	ENSMUSG00000013646.18	ENSMUST00000116376.9	3016	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	38.7101049110206	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACTGTCTGTTAAAAG	443	False	NA	19	True	AATAAA	-20	NA	58221549	58238554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58221629_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUST00000116378.8	chr11	-	3069	6	FSM	ENSMUSG00000049321.18	ENSMUST00000116378.8	3069	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.1763251813542	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806969	50789538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50792119_50796912_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
ENSMUST00000116380.9	chr2	+	2756	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	194.730412606121	2768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTCTTCTGTGATAAA	NA	False	NA	20	True	AATAAA	-17	NA	157120978	157168239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUST00000116388.4	chr12	+	2720	12	FSM	ENSMUSG00000037896.18	ENSMUST00000116388.4	2720	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	9.8114455005324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGGAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111006231	111079818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ENSMUST00000116389.9	chr2	+	1759	9	FSM	ENSMUSG00000027593.16	ENSMUST00000116389.9	1759	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	53.4051437129421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGCTTGTTTATTTTG	NA	False	NA	23	True	AATAAA	-33	NA	154633029	154709181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUST00000116393.3	chr12	+	1226	4	FSM	ENSMUSG00000041449.17	ENSMUST00000116393.3	1226	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	12.3917535302941	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAGAACTTCTCAAATGG	1867	False	NA	NA	False	NA	NA	NA	104216410	104219928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_104217017_104217730_104218005_104218943_104219095_104219733
ENSMUST00000116400.4	chr15	-	2324	10	FSM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	0	0	0	0	multi-exon	FALSE	canonical	1	217	junction_2	304.537941847467	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATCTGGATCGATTGTGT	NA	False	NA	-9	True	ATTAAA	-26	NA	98432125	98416688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUST00000116409.9	chr15	-	4113	25	FSM	ENSMUSG00000022475.20	ENSMUST00000116409.9	4113	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_24	6.21699619323244	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAATATATGTTTTATT	8716	False	NA	-26	True	NA	NA	NA	97742183	97690570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97741986
ENSMUST00000116412.8	chr8	+	1652	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	66	1348	0	0	multi-exon	FALSE	canonical	3	114	junction_5	16.7624458787116	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACAGTACTTGTGG	8928	False	NA	14	True	AATAAA	-16	NA	123202947	123208483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUST00000116415.9	chr8	-	1520	9	FSM	ENSMUSG00000031816.16	ENSMUST00000116415.9	1520	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	25.939533052852	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTATGTTTGTGTAAA	NA	False	NA	-7	True	NA	NA	NA	121835066	121824291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121824665_121825446_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
ENSMUST00000116420.4	chr12	-	2066	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAATTCAAGGTATTT	NA	False	NA	-6	True	AATAAA	-21	NA	73333483	73326784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
ENSMUST00000116420.4-0	chr12	-	1680	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	-1	387	0	83	multi-exon	FALSE	canonical	3	66	junction_2	19.266226926931	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATATTGTATAGACTG	NA	False	NA	-12	True	AGTAAA	-16	NA	73333484	73327171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
ENSMUST00000116425.3	chr8	-	2471	7	FSM	ENSMUSG00000031921.18	ENSMUST00000116425.3	2471	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	4.88762609953839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTCCTTGCGTGATA	NA	False	NA	1	True	NA	NA	NA	107823179	107802148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ENSMUST00000116425.3-0	chr8	-	1667	7	FSM	ENSMUSG00000031921.18	ENSMUST00000116425.3	2471	7	2	802	0	0	multi-exon	FALSE	canonical	3	29	junction_6	4.88762609953839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTGTCTGAAGTTGGG	NA	False	NA	-12	True	NA	NA	NA	107823177	107802950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ENSMUST00000116429.9	chr8	-	3755	24	FSM	ENSMUSG00000017765.18	ENSMUST00000116429.9	3755	24	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_15	19.3746272602721	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGCTCCGGCTCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	106692676	106670221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ENSMUST00000116432.2	chr2	-	1674	11	FSM	ENSMUSG00000027246.13	ENSMUST00000116432.2	1674	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	7.95235814082842	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCGATCATTAGC	NA	False	NA	-17	True	ATTAAA	-15	NA	121273082	121269507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121270031_121270107_121270153_121270328_121270501_121270596_121270640_121270714_121270908_121271576_121271653_121271742_121271823_121271907_121272095_121272191_121272305_121272626_121272663_121272876
ENSMUST00000116434.11	chr13	-	2600	6	FSM	ENSMUSG00000021327.20	ENSMUST00000116434.11	2600	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	29.6486087363303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGGTTCTTACTTGGG	NA	False	NA	2	True	AATAAA	-23	NA	21586925	21571172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
ENSMUST00000116436.9	chr12	-	5548	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	5.59016994374947	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTTTCATGCAAGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	35585037	35547972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
ENSMUST00000116440.9	chr15	-	896	7	FSM	ENSMUSG00000055762.17	ENSMUST00000116440.9	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_6	1385.14264207297	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781146	75767336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773102_75781093
ENSMUST00000116456.10	chr5	+	3738	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	7.06468132488807	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAAGACTCAATTCTT	NA	False	NA	5	True	AATAAA	-22	NA	143608201	143696005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ENSMUST00000116457.9	chr2	-	1683	10	FSM	ENSMUSG00000027215.14	ENSMUST00000116457.9	1683	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	3.62433476228891	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATCCAGTCTGAAGAGG	NA	False	NA	NA	False	ATTAAA	-12	NA	93293291	93249460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93293254
ENSMUST00000116463.4	chr8	-	3363	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426921	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ENSMUST00000116463.4-0	chr8	-	4997	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	-54	-1580	-54	0	multi-exon	FALSE	canonical	3	580	junction_12	181.0697187703	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAACTGTATTGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	70426975	70359725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ENSMUST00000116468.2	chr14	+	2939	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_4	88.7108193370776	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1778	False	NA	32	True	ATTAAA	-18	NA	56905704	56934887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ENSMUST00000116476.9	chr14	+	1761	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	0	0	0	0	multi-exon	FALSE	canonical	3	2245	junction_1	149.688209288507	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATATTTAAAAAAA	NA	False	NA	21	True	NA	NA	NA	55131604	55135613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ENSMUST00000116495.8	chrX	+	1613	5	FSM	ENSMUSG00000079317.11	ENSMUST00000116495.8	1613	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	101.671038157383	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTCATTTGATGCC	NA	False	NA	9	True	AATAAA	-14	NA	165223569	165236136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_165223836_165229786_165229899_165232783_165232929_165233624_165233711_165235132
ENSMUST00000116514.4	chr6	-	2739	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	1089	junction_11	207.479880534104	2824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	2832	False	NA	-1	True	AATAAA	-19	NA	136805231	136790651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ENSMUST00000116517.9	chr9	-	3741	5	FSM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	188.321533553654	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242096	103230302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103241661
ENSMUST00000116522.8	chr9	-	1754	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	12	2710	0	0	multi-exon	FALSE	canonical	3	120	junction_2	6.34209919681348	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATATTGCATCTGT	NA	False	NA	-40	True	AATAAA	-18	NA	100428175	100377055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
ENSMUST00000116527.2	chrX	+	837	3	FSM	ENSMUSG00000047844.4	ENSMUST00000116527.2	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	2369	junction_2	964	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCAGTCATCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	135039744	135041192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135039916_135040271_135040349_135040603
ENSMUST00000116528.2	chr1	+	3277	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	38.3780670833987	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAAGAGAATTTGTGGG	NA	False	NA	17	True	ATTAAA	-18	NA	134383292	134418611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ENSMUST00000116535.3	chrX	+	783	1	FSM	ENSMUSG00000080254.5	ENSMUST00000116535.3	783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGGTTCAAGCAGAACAA	NA	False	NA	NA	False	NA	NA	NA	74187293	74188076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_74187300_74188100
ENSMUST00000116542.9	chr19	-	2100	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	0	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAATGTGTCTGAATGTT	2155	False	NA	NA	False	AATAAA	-14	NA	10181307	10176501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10178462_10181167
ENSMUST00000116547.3	chrX	+	7375	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGAACCGTGTGGCTT	NA	False	NA	8	True	AATAAA	-18	NA	102400081	102439698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ENSMUST00000116547.3-0	chrX	+	1210	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	115	6050	115	-6050	multi-exon	FALSE	canonical	3	35	junction_3	5.41848687365763	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTGTAAATATTGTC	NA	False	NA	NA	False	GATAAA	-15	NA	102400196	102433648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ENSMUST00000116551.10	chr19	+	985	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	0	0	0	0	multi-exon	TRUE	canonical	3	803	junction_1	23.6971634495683	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	9314	False	NA	16	True	ATTAAA	-16	NA	6887114	6888396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ENSMUST00000116556.4	chr17	+	1831	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.5182236442885	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	False	NA	24	True	AATAAA	-32	NA	66418639	66426442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUST00000116558.3	chr19	-	1189	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5779661	5778114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5778907_5779264
ENSMUST00000116560.3	chr19	+	1148	6	FSM	ENSMUSG00000056201.9	ENSMUST00000116560.3	1148	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	3070.36039578418	3211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGCTTTTGGGTTTGG	NA	False	NA	12	True	NA	NA	NA	5540512	5544057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408_5543519_5543520_5543527_5543528
ENSMUST00000116567.4	chr19	+	1388	10	FSM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	16.1528195757556	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGATGTGTGGCTG	2730	False	NA	8	True	AATAAA	-19	NA	5091381	5099945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ENSMUST00000116571.9	chr19	-	2413	13	FSM	ENSMUSG00000054611.18	ENSMUST00000116571.9	2413	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.4652602872322	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCACCTGGCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	4447108	4391377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4391483_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ENSMUST00000116578.8	chrX	-	1418	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	0	0	0	0	multi-exon	FALSE	canonical	3	1767	junction_7	141.190120050944	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974456	72965726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ENSMUST00000116584.2	chr16	-	1075	10	FSM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	512	707	0	-707	multi-exon	FALSE	canonical	3	703	junction_1	110.666443551761	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGTGTTTGTCCCTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	84532118	84515170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ENSMUST00000116605.8	chr6	+	1322	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	35	6200	0	0	multi-exon	FALSE	canonical	3	769	junction_5	83.3273064487266	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATTAAGCCTTGT	NA	False	NA	48	True	TATAAA	-25	NA	66512408	66518004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ENSMUST00000116612.3	chr17	+	2283	10	FSM	ENSMUSG00000039656.18	ENSMUST00000116612.3	2283	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	64.8690989609074	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCATTTTCTGGAC	NA	False	NA	15	True	CATAAA	-15	NA	34251374	34257367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ENSMUST00000116621.2	chrX	-	908	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	2198	junction_1	70	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	20483858	20481564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20481782_20481952_20482084_20483298
ENSMUST00000116641.9	chr17	+	1858	11	FSM	ENSMUSG00000002279.20	ENSMUST00000116641.9	1858	11	0	0	0	0	multi-exon	TRUE	canonical	1	15	junction_2	37.5467708331888	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCCTCCTGTCTCTAT	NA	False	NA	107	True	NA	NA	NA	25798150	25881800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25798354_25804516_25804827_25807649_25807661_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUST00000116652.8	chr1	-	1512	4	FSM	ENSMUSG00000025902.14	ENSMUST00000116652.8	1512	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCGACCCGACCTGAGGG	NA	False	NA	NA	False	NA	NA	NA	4566586	4561935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_4562892_4563322_4563714_4563994_4564087_4566513
ENSMUST00000116669.2	chr18	-	2019	15	FSM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	235.664107213151	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACTTGATTATACACT	14	True	NA	-65	True	AATAAA	-15	NA	10030067	9995593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10022817_10022851_10024533_10024680_10029912
ENSMUST00000116685.3	chr5	-	71	1	FSM	ENSMUSG00000118744.1	ENSMUST00000116685.3	71	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAACAGGCAGGAATTTA	6862	False	NA	NA	False	NA	NA	NA	23916059	23915988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23916000_23916100
ENSMUST00000116819.3	chr10	-	65	1	FSM	ENSMUSG00000080469.3	ENSMUST00000116819.3	65	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTGACTGACAGATATC	896	False	NA	NA	False	AATGAA	-9	NA	62601419	62601354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62601400_62601400
ENSMUST00000117060.2	chr4	+	1963	1	FSM	ENSMUSG00000081593.2	ENSMUST00000117060.2	1963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAATAAGACTCAAAAG	889	False	NA	NA	False	NA	NA	NA	12125289	12127252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_12125300_12127300
ENSMUST00000117061.8	chr11	+	4563	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.8486099428282	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATGGTGTCATTTTT	NA	False	NA	17	True	ATTAAA	-19	NA	53410626	53434923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
ENSMUST00000117066.8	chr2	+	1712	9	FSM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	35.1212186576719	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCACTGTTAATCATAAA	5127	False	NA	NA	False	ATTAAA	-24	NA	164339454	164345040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ENSMUST00000117069.8	chr1	-	1363	7	FSM	ENSMUSG00000026035.16	ENSMUST00000117069.8	1363	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	68.4505092911822	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTCCTTTTTTTTA	NA	False	NA	1	True	AATAGA	-28	NA	58484588	58470152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58483969
ENSMUST00000117082.2	chr16	-	2987	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117082.2	2987	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	162.324853379547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGACTCCTGTGCAGGT	NA	False	NA	NA	False	NA	NA	NA	17709457	17659173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677388_17690426_17690550_17709249
ENSMUST00000117083.2	chr9	-	1999	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	28.3474229673332	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTAGGTCATTTTT	NA	False	NA	-8	True	TATAAA	-12	NA	65792338	65740437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUST00000117083.2-0	chr9	-	3396	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	0	-1397	0	0	multi-exon	TRUE	canonical	3	144	junction_4	28.3474229673332	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65792338	65739040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUST00000117085.2	chr7	-	2238	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_1	80.5	2763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGGGCTTATGTGCTCC	NA	False	NA	-7	True	AATAAA	-18	NA	83801101	83758563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_83760010_83763458_83763639_83800489
ENSMUST00000117086.2	chr10	+	2246	12	FSM	ENSMUSG00000037846.19	ENSMUST00000117086.2	2246	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	13.4870614459296	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTGTAATACTTAATAG	NA	False	NA	NA	False	AATACA	-19	NA	67815544	67878128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUST00000117095.8	chr7	-	2282	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_13	66.1410542194063	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATGAGATGGTATGTT	NA	False	NA	1	True	AGTAAA	-31	NA	27252637	27231424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ENSMUST00000117096.2	chr13	-	3797	8	FSM	ENSMUSG00000021364.17	ENSMUST00000117096.2	3797	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	22.3533771360785	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTTGCAACTTTTC	7802	False	NA	NA	False	AATAAA	-15	NA	41373638	41335974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_41338884_41340328_41340464_41340904_41341030_41343421_41343594_41345363_41345442_41348122_41348311_41350610_41350675_41373512
ENSMUST00000117099.8	chr16	+	1894	14	FSM	ENSMUSG00000022945.13	ENSMUST00000117099.8	1894	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	247.655157271309	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCAAATAAACACTCATGAA	4389	False	NA	-17	True	NA	NA	NA	93680811	93702965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93680864_93681320_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUST00000117102.4	chr5	+	3250	1	FSM	ENSMUSG00000081683.6	ENSMUST00000117102.4	3250	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGTCACTGTGCATT	NA	False	NA	14	True	AATAAA	-17	NA	128677907	128681157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_128677900_128681200
ENSMUST00000117131.2	chrX	+	1214	1	FSM	ENSMUSG00000084131.2	ENSMUST00000117131.2	1214	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21625	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGGACCACTTTGTGCA	NA	False	NA	-53	True	AAGAAA	-31	NA	73214258	73215472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73214300_73215500
ENSMUST00000117136.2	chr16	-	758	4	FSM	ENSMUSG00000022671.14	ENSMUST00000117136.2	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	237.265439727089	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGTTCTATGTGGAG	NA	False	NA	-11	True	ATTAAA	-13	NA	15681233	15666313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_15666594_15680261_15680408_15680611_15680797_15681086
ENSMUST00000117143.8	chr5	-	749	6	FSM	ENSMUSG00000029352.15	ENSMUST00000117143.8	749	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.86711710683521	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCAGCTCTGTCTGTG	NA	False	NA	NA	False	AATAAA	-9	NA	113229449	113223712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113223938_113225400_113225544_113226248_113226382_113227625_113227745_113228345_113228447_113229421
ENSMUST00000117146.9	chr1	-	2181	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTTTCTATGACAATG	NA	False	NA	NA	False	TATAAA	-21	NA	16689713	16640005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUST00000117146.9-0	chr1	-	1618	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	205	358	0	-358	multi-exon	FALSE	canonical	3	378	junction_5	28.7888867447145	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689508	16640363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUST00000117148.2	chr3	+	684	1	FSM	ENSMUSG00000039617.9	ENSMUST00000117148.2	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCTGTATGCAGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	21103728	21104412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_21103700_21104400
ENSMUST00000117171.8	chr6	-	2174	5	FSM	ENSMUSG00000030170.15	ENSMUST00000117171.8	2174	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	2.73861278752583	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTCCCTCTCCTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	119426347	119409491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119426177
ENSMUST00000117179.9	chr8	+	4046	18	FSM	ENSMUSG00000031565.19	ENSMUST00000117179.9	4046	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	66.5202833494101	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTATCCTGGGCGT	NA	False	NA	11	True	AATAAA	-14	NA	26008810	26064797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ENSMUST00000117189.2	chr7	+	2995	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGCTTCTCCAACATC	NA	False	NA	30	True	AATAAA	-41	NA	12631762	12643010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12631908_12640160
ENSMUST00000117196.9	chr5	+	2864	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	74.2377262582846	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112187	107132297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUST00000117217.8	chr12	-	3549	11	FSM	ENSMUSG00000021224.16	ENSMUST00000117217.8	3549	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	36.1696004954437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATAGTTCTGTTTTTA	NA	False	NA	0	True	NA	NA	NA	83968708	83840807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ENSMUST00000117219.2	chr2	-	1545	1	FSM	ENSMUSG00000083563.2	ENSMUST00000117219.2	1545	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGGAATCGAACCC	NA	False	NA	NA	False	AGTAAA	-5	NA	22479659	22478114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22478100_22479700
ENSMUST00000117230.2	chr4	+	597	1	FSM	ENSMUSG00000082998.4	ENSMUST00000117230.2	597	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCACTCCACAGATTCTG	NA	False	NA	NA	False	NA	NA	NA	69610214	69610811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_69610200_69610800
ENSMUST00000117236.8	chr14	+	2538	15	FSM	ENSMUSG00000022214.16	ENSMUST00000117236.8	2538	15	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	36.2303430166213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTCTGTGTCACTTT	NA	False	NA	14	True	AATAAA	-19	NA	55797462	55807522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55797579_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000117237.2	chr2	-	6473	12	FSM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-234	2798	-234	-2798	multi-exon	FALSE	canonical	3	14	junction_3	32.5683007674032	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTTGATTTATAACTGA	NA	False	NA	NA	False	AATAAA	-15	NA	104647339	104587937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ENSMUST00000117242.8	chr3	-	4551	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	6.26950290427133	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGAATATTTCTTTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	75864256	75783489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ENSMUST00000117245.2	chr1	+	4361	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	10.65761582562	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCCTGGTTTTCCTT	NA	False	NA	8	True	AATAAA	-21	NA	182236736	182289997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ENSMUST00000117254.9	chr17	+	1587	5	FSM	ENSMUSG00000046711.17	ENSMUST00000117254.9	916	5	-31	-640	0	0	multi-exon	FALSE	canonical	3	289	junction_4	2003.13017550033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775605	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781414
ENSMUST00000117268.9	chr4	-	3266	7	FSM	ENSMUSG00000040550.18	ENSMUST00000117268.9	3266	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAAATTGTCATTTGT	-2	True	NA	9	True	AATAAA	-28	NA	14826587	14809497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUST00000117268.9-0	chr4	-	2526	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	192	539	0	0	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGAAGTAATGTTATC	23	True	NA	-2	True	AATAAA	-12	NA	14826395	14810045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUST00000117271.3	chr3	-	2115	1	FSM	ENSMUSG00000087119.5	ENSMUST00000117271.3	2115	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	103553384	103551269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103551300_103553400
ENSMUST00000117276.11	chr10	-	1394	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	144	2258	0	-2255	multi-exon	FALSE	canonical	3	49	junction_3	7.58653778449403	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTGTGTGGCCATGTC	NA	False	NA	-4	True	TTTAAA	-22	NA	80873116	80866629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
ENSMUST00000117280.8	chr4	+	5328	25	FSM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	79.8595990195014	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-19	True	NA	21	True	ATTAAA	-21	NA	52439242	52488260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUST00000117281.2	chrX	-	2621	1	FSM	ENSMUSG00000073060.5	ENSMUST00000117281.2	2621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGACTCTGCCTGTTCCCT	NA	False	NA	NA	False	NA	NA	NA	93841789	93839168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93839200_93841800
ENSMUST00000117288.2	chr1	+	531	1	FSM	ENSMUSG00000081051.5	ENSMUST00000117288.2	531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGAGACCCACTGAATA	NA	False	NA	NA	False	NA	NA	NA	95426345	95426876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_95426300_95426900
ENSMUST00000117291.8	chr10	+	3669	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_27	39.2310170953031	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAGCTAGTAAAGCCA	NA	False	NA	14	True	AATAAA	-19	NA	3923117	4106111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ENSMUST00000117295.2	chrX	+	882	1	FSM	ENSMUSG00000081684.5	ENSMUST00000117295.2	882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3373	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTTTTTATATGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	51987464	51988346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_51987500_51988300
ENSMUST00000117299.10	chr2	-	747	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	0	0	0	0	multi-exon	FALSE	canonical	3	1785	junction_1	271.099407761966	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTTTAAATTTTGTCTT	296	False	NA	-8	True	AATAAA	-25	NA	84501114	84499558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ENSMUST00000117355.2	chr3	-	1756	9	FSM	ENSMUSG00000005625.16	ENSMUST00000117355.2	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_2	388.88942435479	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTTTTGCTTCAAATAG	NA	False	NA	-21	True	AATAAA	-14	NA	94949854	94940015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUST00000117356.2	chr6	-	213	1	FSM	ENSMUSG00000080921.5	ENSMUST00000117356.2	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCCCTCTGCGTGTGAC	NA	False	NA	NA	False	NA	NA	NA	140692898	140692685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_140692700_140692900
ENSMUST00000117361.8	chr18	-	2687	14	FSM	ENSMUSG00000044252.19	ENSMUST00000117361.8	2687	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	98.4808875218973	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996437	12888384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996199
ENSMUST00000117363.9	chr16	-	2303	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	0	877	0	0	multi-exon	FALSE	canonical	2	298	junction_4	64.525303508774	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406410	30380188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ENSMUST00000117364.8	chr5	-	1657	10	FSM	ENSMUSG00000035234.19	ENSMUST00000117364.8	1657	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAAGTTTGTAAT	NA	False	NA	-14	True	AATAAA	-8	NA	100968806	100953068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUST00000117388.8	chr5	-	2564	11	FSM	ENSMUSG00000029228.16	ENSMUST00000117388.8	2564	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	3.95474398665704	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTAGAGGATTTCTT	NA	False	NA	1	True	AATAAA	-19	NA	74863573	74757764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_74758072_74758436_74758596_74766697_74766924_74768397_74768567_74771337_74771473_74780634_74781007_74784142_74784346_74788008_74788162_74788780_74789023_74846056_74846534_74863452
ENSMUST00000117389.8	chr9	+	1952	7	FSM	ENSMUSG00000042496.19	ENSMUST00000117389.8	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	4.53688586293873	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGAGCATTCTTGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	31191833	31241914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957
ENSMUST00000117392.9	chr11	-	6625	10	FSM	ENSMUSG00000045374.19	ENSMUST00000117392.9	6625	10	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	4.57043640026736	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGTGAGGCTGTGTTGT	3088	False	NA	-4	True	AATAAA	-21	NA	75345264	75331773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ENSMUST00000117394.2	chr7	-	4985	16	FSM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	9.03228776236797	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTTGGCCCAGGCTGCC	8433	False	NA	NA	False	NA	NA	NA	126483875	126468674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUST00000117396.3	chr5	+	3703	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_14	43.4953733171702	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACAGTTGTTCTGAGA	NA	False	NA	NA	False	ATTAAA	-18	NA	45827260	45857888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ENSMUST00000117399.2	chrX	+	3842	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_10	94.3325971702724	2549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95139647	95212158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ENSMUST00000117404.8	chr7	-	1283	5	FSM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	-21	-563	0	0	multi-exon	FALSE	canonical	3	25	junction_1	88.1373218336024	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012485	136977302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268_136989431_137012368
ENSMUST00000117405.2	chr5	-	1941	1	FSM	ENSMUSG00000100801.2	ENSMUST00000117405.2	1941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTCCAAGAAGAAGGTG	NA	False	NA	-80	True	NA	NA	NA	5833555	5831614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_5831600_5833600
ENSMUST00000117411.8	chr6	+	933	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	935.620961358462	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGGTTATATTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	40448408	40457926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUST00000117419.8	chr7	+	3214	29	FSM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	33.6220742600902	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGAGGGCG	9924	False	NA	34	True	AATATA	-16	NA	24603831	24626017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUST00000117422.2	chr10	-	2294	12	FSM	ENSMUSG00000035041.9	ENSMUST00000117422.2	2294	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.36713028478028	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGGCTCAGTGGGTAAA	7194	False	NA	NA	False	NA	NA	NA	80934708	80920157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925279_80925910_80926018_80926971_80927270_80927631_80927764_80928336_80928492_80928640_80928717_80934489
ENSMUST00000117423.9	chr13	-	2023	20	FSM	ENSMUSG00000021693.21	ENSMUST00000117423.9	2023	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	34.9608407766695	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATCCCCAGAATCCCC	NA	False	NA	NA	False	NA	NA	NA	107133264	107098630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107133254
ENSMUST00000117425.8	chr5	-	1231	7	FSM	ENSMUSG00000015806.13	ENSMUST00000117425.8	1231	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45605515	45591394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45605434
ENSMUST00000117430.2	chr2	-	392	1	FSM	ENSMUSG00000081087.2	ENSMUST00000117430.2	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1084	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTAAAGCATAAATAAAAA	NA	False	NA	NA	False	AAAACA	-35	NA	152027602	152027210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152027200_152027600
ENSMUST00000117438.8	chr1	-	1476	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	499	1276	0	-1276	multi-exon	FALSE	canonical	3	160	junction_13	218.809771208535	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGTTGGGTCTTGT	NA	False	NA	-23	True	AATGAA	-14	NA	60137305	60117302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ENSMUST00000117440.8	chr10	-	1457	9	FSM	ENSMUSG00000060002.15	ENSMUST00000117440.8	4863	9	103	3303	0	0	multi-exon	FALSE	canonical	3	79	junction_1	46.4837001001426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTCATATTTCTGCAAT	4124	False	NA	-7	True	AATAAA	-18	NA	88339832	88308678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ENSMUST00000117446.8	chr11	-	1674	4	FSM	ENSMUSG00000020415.17	ENSMUST00000117446.8	1674	4	0	0	0	0	multi-exon	FALSE	canonical	3	9157	junction_2	511.130337802622	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTGAATACTTAACCAA	NA	False	NA	-26	True	AATAAA	-20	NA	43316808	43311090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_43312093_43313719_43313814_43315545_43315725_43316409
ENSMUST00000117449.8	chr12	+	1874	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	199.890525593942	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTCTGATAATTCT	NA	False	NA	14	True	AATAAA	-20	NA	72132630	72148235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUST00000117452.8	chr7	-	5211	5	FSM	ENSMUSG00000053550.14	ENSMUST00000117452.8	5211	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	3.08220700148449	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGCCTCAAGGTTTTC	5830	False	NA	NA	False	AATAAA	-16	NA	4839173	4828550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4833275_4833757_4833908_4834671_4834723_4837228_4837384_4839042
ENSMUST00000117468.8	chr16	-	2887	11	FSM	ENSMUSG00000022604.19	ENSMUST00000117468.8	2887	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	12.5395374715338	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGGCATATGCACTTT	NA	False	NA	NA	False	ACTAAA	-12	NA	55754596	55725340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55754427
ENSMUST00000117476.2	chr11	-	393	1	FSM	ENSMUSG00000083022.2	ENSMUST00000117476.2	393	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTAAAGCATAAATAAAAA	NA	False	NA	-51	True	AAAACA	-35	NA	6123036	6122643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6122600_6123000
ENSMUST00000117481.2	chr4	+	565	1	FSM	ENSMUSG00000094417.2	ENSMUST00000117481.2	565	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTGAAAGTGACCTGT	NA	False	NA	NA	False	AAAACA	-21	NA	145501288	145501853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145501300_145501900
ENSMUST00000117485.3	chr2	-	433	1	FSM	ENSMUSG00000070271.8	ENSMUST00000117485.3	433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACATCCCATGCACGGCT	NA	False	NA	NA	False	AATACA	-32	NA	14632132	14631699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_14631700_14632100
ENSMUST00000117492.9	chr3	+	3886	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_13	62.1055263911158	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052114	152098970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUST00000117497.8	chr4	-	4097	7	FSM	ENSMUSG00000040928.16	ENSMUST00000117497.8	1053	7	-17	-3027	0	0	multi-exon	FALSE	canonical	3	49	junction_5	68.8226383943216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1104	False	NA	-5	True	AATAAA	-15	NA	129083419	129041797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129083334
ENSMUST00000117509.8	chr17	-	5418	33	FSM	ENSMUSG00000024163.18	ENSMUST00000117509.8	5418	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	18.6942661246036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155886	25116506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25127384_25127403_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUST00000117513.8	chr10	-	5240	6	FSM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	5.08330601085553	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTGGTGTCTCCATT	NA	False	NA	-5	True	AATAAA	-21	NA	60588561	60547850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_60552270_60556639_60556803_60559542_60559770_60566348_60566432_60586164_60586464_60588512
ENSMUST00000117531.2	chr2	-	447	1	FSM	ENSMUSG00000083483.4	ENSMUST00000117531.2	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCACACCGGAGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	130227249	130226802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130226800_130227200
ENSMUST00000117536.8	chr5	+	1862	10	FSM	ENSMUSG00000029247.18	ENSMUST00000117536.8	1862	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	1007.72571224074	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGGGATCTGACCCCAT	347	False	NA	9	True	NA	NA	NA	77099214	77115160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_77099249_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUST00000117544.2	chrX	-	2201	1	FSM	ENSMUSG00000073294.5	ENSMUST00000117544.2	2201	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTTGTTGTGGTACAA	NA	False	NA	1	True	AATAAA	-24	NA	5995473	5993272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_5993300_5995500
ENSMUST00000117549.8	chr9	-	4582	20	FSM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	22	-1189	0	1189	multi-exon	FALSE	canonical	2	4	junction_19	14.0720347023741	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCTCTGGGTAGTTA	5322	False	NA	NA	False	AATAAA	-1	NA	44876876	44835956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44876782
ENSMUST00000117551.4	chr8	-	4134	24	FSM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	0	270	0	-268	multi-exon	FALSE	canonical	3	46	junction_3	7.20402114134286	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGAGTGGTTTGGATT	NA	False	NA	-2	True	ATTAAA	-18	NA	13727603	13617217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ENSMUST00000117557.8	chr9	+	2019	9	FSM	ENSMUSG00000015656.18	ENSMUST00000117557.8	2019	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7062.92189779662	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2485	False	NA	10	True	AATAAA	-20	NA	40712597	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714091_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUST00000117559.2	chr4	-	472	1	FSM	ENSMUSG00000081394.2	ENSMUST00000117559.2	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATGCGTTAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	131876195	131875723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131875700_131876200
ENSMUST00000117563.2	chr9	-	472	1	FSM	ENSMUSG00000080848.4	ENSMUST00000117563.2	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1820	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTAGAGCAGAGTT	NA	False	NA	-63	True	NA	NA	NA	115870132	115869660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_115869700_115870100
ENSMUST00000117577.8	chr7	-	2384	8	FSM	ENSMUSG00000038187.15	ENSMUST00000117577.8	2384	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	72.594484526536	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACCTTGGCTAGATTC	NA	False	NA	1	True	AATAAA	-34	NA	112946492	112914832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112946238
ENSMUST00000117580.8	chr8	-	696	5	FSM	ENSMUSG00000055553.17	ENSMUST00000117580.8	696	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	353.84839620945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGATCTTTATGCCTCT	NA	False	NA	NA	False	NA	NA	NA	70980606	70967339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70967399_70968044_70968092_70971014_70971168_70972586_70972712_70980294
ENSMUST00000117583.8	chr6	+	950	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	0	0	0	0	multi-exon	FALSE	canonical	3	2373	junction_7	253.923417669218	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTGCTTCCTCTCACG	NA	False	NA	23	True	AATAAA	-29	NA	86986817	87005441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ENSMUST00000117589.8	chr11	-	987	5	FSM	ENSMUSG00000020738.17	ENSMUST00000117589.8	987	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1987.64596948249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115426643	115413927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115425895_115425972_115426604
ENSMUST00000117597.2	chr10	+	1799	9	FSM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	75.1232320923428	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85858060	85884187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85858195_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUST00000117598.8	chr16	+	4935	47	FSM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	17.1577937561462	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCTGCCAGTCTCTT	NA	False	NA	13	True	AATAAA	-19	NA	21241950	21463422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUST00000117600.9	chr17	+	1595	5	FSM	ENSMUSG00000046711.17	ENSMUST00000117600.9	1595	5	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	1949.43562345618	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGTGTAAGGAGCA	NA	False	NA	NA	False	AATAAA	-23	NA	27775626	27782644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781414
ENSMUST00000117611.8	chr7	-	2297	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117611.8	2297	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	174.958693349883	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATGAGATGGTATGTT	NA	False	NA	1	True	AGTAAA	-31	NA	27252643	27231424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27248434_27248519_27252422
ENSMUST00000117632.8	chr4	+	3123	5	FSM	ENSMUSG00000073988.14	ENSMUST00000117632.8	3123	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	30.6431068920891	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTAAAATCTATTAAA	367	False	NA	NA	False	AGTAAA	-10	NA	20008356	20030785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_20008644_20014630_20014785_20021191_20021386_20023784_20023895_20028407
ENSMUST00000117633.8	chr16	+	8731	12	FSM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_11	92.9729366114073	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGGCTTTTATGGAAC	NA	False	NA	26	True	AATAAA	-13	NA	91444393	91476095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ENSMUST00000117637.8	chrX	-	1593	6	FSM	ENSMUSG00000031310.17	ENSMUST00000117637.8	1593	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	47.004680617998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCAGCCTCTCCTT	NA	False	NA	-4	True	NA	NA	NA	100463447	100458538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100459013_100459366_100459545_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ENSMUST00000117638.2	chr4	-	2885	4	FSM	ENSMUSG00000062518.8	ENSMUST00000117638.2	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	89.2238134630486	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	147787010	147757958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147760511_147762673_147762801_147766723_147766828_147786908
ENSMUST00000117641.8	chr19	+	2004	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	8.51377560192891	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTAGGCGGCAGTGGC	3968	False	NA	2	True	AATAAA	-17	NA	9995557	10012819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUST00000117646.8	chr9	-	5719	20	FSM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	7.12181308422569	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCCACTTCTTCATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	50639367	50574055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ENSMUST00000117648.9	chr16	+	7415	46	FSM	ENSMUSG00000040785.20	ENSMUST00000117648.9	7415	46	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_37	31.7357141963995	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTTCACTGTCGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	94171476	94270079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ENSMUST00000117654.3	chr9	-	1490	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	75	419	0	0	multi-exon	FALSE	canonical	3	1493	junction_6	94.6836839165017	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568533	37560477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUST00000117655.3	chr4	+	780	1	FSM	ENSMUSG00000096233.2	ENSMUST00000117655.3	780	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGGTCTTTGCTAAGCC	NA	False	NA	NA	False	NA	NA	NA	145563788	145564568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145563800_145564600
ENSMUST00000117661.9	chr5	+	4934	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	0	0	0	0	multi-exon	TRUE	canonical	3	168	junction_8	27.7566163655824	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTGGTTTTTGCTAG	NA	False	NA	NA	False	ATTAAA	-14	NA	54155840	54278399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ENSMUST00000117661.9-0	chr5	+	3745	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	66	1123	0	0	multi-exon	FALSE	canonical	3	168	junction_8	27.7566163655824	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGAATGAGTTTG	NA	False	NA	NA	False	TATAAA	-16	NA	54155906	54277276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ENSMUST00000117672.9	chr17	+	3782	7	FSM	ENSMUSG00000005936.20	ENSMUST00000117672.9	2162	7	0	-1620	0	0	multi-exon	FALSE	canonical	3	11	junction_1	191.759760000777	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171654	29188523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29171732_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUST00000117690.2	chr2	-	278	1	FSM	ENSMUSG00000061272.9	ENSMUST00000117690.2	278	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCCTGCTGTCTGAGAC	NA	False	NA	NA	False	NA	NA	NA	156253094	156252816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156252800_156253100
ENSMUST00000117710.2	chr11	+	580	2	FSM	ENSMUSG00000020267.7	ENSMUST00000117710.2	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	4806	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCATGTCCTTGGGGGTC	NA	False	NA	NA	False	AATGAA	-36	NA	54757306	54761133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54757427_54760673
ENSMUST00000117713.8	chr16	-	1964	6	FSM	ENSMUSG00000004071.14	ENSMUST00000117713.8	1964	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	194.363988434072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCCTCTGCTGTCTTG	NA	False	NA	-19	True	ATTAAA	-21	NA	4607794	4585202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4586514_4586608_4586832_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUST00000117723.2	chr4	+	215	1	FSM	ENSMUSG00000083326.5	ENSMUST00000117723.2	215	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCCTCTGCGTGTGAC	5631	False	NA	NA	False	NA	NA	NA	138153098	138153313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_138153100_138153300
ENSMUST00000117725.2	chr15	-	4347	9	FSM	ENSMUSG00000016552.14	ENSMUST00000117725.2	4347	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	16.6203000875435	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATAACTGGGCATGG	8706	False	NA	NA	False	NA	NA	NA	77840875	77825218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840668
ENSMUST00000117726.9	chr18	-	1890	9	FSM	ENSMUSG00000002475.17	ENSMUST00000117726.9	1890	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.03112887414927	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTTTCTTTGTGAGTT	21	True	NA	NA	False	AATAAA	-13	NA	10706713	10644412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_10645224_10647725_10647892_10647969_10648019_10652187_10652362_10658779_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
ENSMUST00000117757.9	chr6	-	1273	7	FSM	ENSMUSG00000057666.19	ENSMUST00000117757.9	1273	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4049.97499649346	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125143430	125138815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125143356
ENSMUST00000117780.2	chr11	+	1113	4	FSM	ENSMUSG00000020894.17	ENSMUST00000117780.2	1113	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	8.17856276425687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGGCCTCTCCCCCAC	NA	False	NA	NA	False	NA	NA	NA	68979335	68981516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801
ENSMUST00000117784.8	chr3	-	2387	11	FSM	ENSMUSG00000048997.18	ENSMUST00000117784.8	2387	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	7.33212111192934	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAAGACTGTCTCCCTGT	3406	False	NA	NA	False	AAGAAA	-22	NA	108117778	108109543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108109690_108110563_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
ENSMUST00000117786.9	chr15	-	2695	11	FSM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_10	149.550794046705	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8156	False	NA	-4	True	AATAAA	-24	NA	79326200	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
ENSMUST00000117801.8	chr16	-	4507	11	FSM	ENSMUSG00000005580.12	ENSMUST00000117801.8	4507	11	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_5	2.72763633939717	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAAAAAGCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	4237672	4105392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716_4237453_4237639
ENSMUST00000117808.2	chr2	-	2330	3	FSM	ENSMUSG00000083170.2	ENSMUST00000117808.2	2330	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCACTTGTCAATCATATT	NA	False	NA	NA	False	NA	NA	NA	176547341	176543643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_176545786_176546938_176547000_176547214
ENSMUST00000117812.8	chr7	-	3039	6	FSM	ENSMUSG00000030452.17	ENSMUST00000117812.8	3039	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	82.412620392753	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612187	55581034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611947
ENSMUST00000117814.8	chr1	+	1268	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	7.1336448530109	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCGGACCTGCTGTGGT	2650	False	NA	18	True	CATAAA	-18	NA	92862487	92868694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
ENSMUST00000117815.2	chr7	-	1095	1	FSM	ENSMUSG00000082154.2	ENSMUST00000117815.2	1095	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCGAGGAGTAAGAAC	NA	False	NA	NA	False	NA	NA	NA	104151356	104150261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_104150300_104151400
ENSMUST00000117836.8	chr16	+	1099	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	3.19722101554181	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGGCTCTGTCTCTAAT	NA	False	NA	8	True	AATAAA	-20	NA	91169737	91190928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
ENSMUST00000117851.2	chr11	-	599	1	FSM	ENSMUSG00000083992.2	ENSMUST00000117851.2	599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATAAAGACTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	86521852	86521253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86521300_86521900
ENSMUST00000117859.8	chr11	+	3410	4	FSM	ENSMUSG00000052563.14	ENSMUST00000117859.8	3410	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.94422221866655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGTTCCTGACTACAA	NA	False	NA	12	True	AATAAA	-18	NA	51541780	51548508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51542041_51544560_51544699_51544837_51544941_51545599
ENSMUST00000117865.3	chrX	+	1210	1	FSM	ENSMUSG00000082226.5	ENSMUST00000117865.3	1210	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACCTTATTTTAAATTC	2325	False	NA	NA	False	NA	NA	NA	59591613	59592823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_59591600_59592800
ENSMUST00000117878.8	chr5	+	2931	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_8	110.241141934398	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTCATTTTGT	NA	False	NA	15	True	ATTAAA	-15	NA	149121525	149152243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ENSMUST00000117890.8	chr17	+	1641	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	37.7388688519174	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	25105616	25111123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUST00000117891.2	chr16	-	372	1	FSM	ENSMUSG00000089814.2	ENSMUST00000117891.2	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTTCCAGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	94160171	94159799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_94159800_94160200
ENSMUST00000117892.2	chr15	+	2536	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_2	1	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTTTTTTTTTCACT	NA	False	NA	17	True	AATAAA	-18	NA	97682235	97690573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_97682498_97687783_97687952_97688467
ENSMUST00000117892.2-0	chr15	+	1572	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	73	891	0	554	multi-exon	FALSE	canonical	3	145	junction_2	1	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCTCAGGGTGTTTC	NA	False	NA	7	True	AATACA	-12	NA	97682308	97689682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_97682498_97687783_97687952_97688467
ENSMUST00000117893.2	chr11	-	792	1	FSM	ENSMUSG00000084384.4	ENSMUST00000117893.2	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAAGCATGTAGATCC	NA	False	NA	NA	False	NA	NA	NA	58284386	58283594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58283600_58284400
ENSMUST00000117901.8	chrX	-	5178	24	FSM	ENSMUSG00000031310.17	ENSMUST00000117901.8	5178	24	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	34.4771368861147	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTCTCTGGGGGA	NA	False	NA	-2	True	AATAAA	-14	NA	100463404	100447989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100449410_100449510_100449626_100452082_100452198_100452759_100452912_100453238_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ENSMUST00000117919.8	chr6	-	2262	5	FSM	ENSMUSG00000030222.14	ENSMUST00000117919.8	2262	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	7.44983221287567	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTTGGAATTCTTT	NA	False	NA	-12	True	AATAAA	-14	NA	137146730	137031828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137146477
ENSMUST00000117927.2	chr8	-	456	1	FSM	ENSMUSG00000081378.2	ENSMUST00000117927.2	456	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGTTGTGTGCACAAGC	3661	False	NA	NA	False	NA	NA	NA	120329364	120328908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120328900_120329400
ENSMUST00000117941.3	chr2	-	720	1	FSM	ENSMUSG00000082163.3	ENSMUST00000117941.3	720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGTCTTTCTATACAAAA	3078	False	NA	NA	False	NA	NA	NA	156836812	156836092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156836100_156836800
ENSMUST00000117945.8	chr16	-	4003	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	0	0	0	0	multi-exon	TRUE	canonical	3	236	junction_7	73.3575717518876	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709524	17658218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ENSMUST00000117950.2	chr1	+	1581	6	FSM	ENSMUSG00000026411.18	ENSMUST00000117950.2	847	6	0	-734	0	246	multi-exon	FALSE	canonical	2	15	junction_1	164.577519728546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGCAGATCTCAAGG	NA	False	NA	20	True	ATTAAA	-15	NA	135945799	135962764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135945987_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ENSMUST00000117956.2	chr10	+	1863	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	17.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAAAACTA	NA	False	NA	NA	False	NA	NA	NA	80973786	80984292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80973905_80979795_80981052_80983803
ENSMUST00000117956.2-0	chr10	+	2995	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	0	-1132	0	1132	multi-exon	FALSE	canonical	3	48	junction_1	17.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTCCGGTAGAATCCACT	NA	False	NA	6	True	AATAAA	-15	NA	80973786	80985424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80973905_80979795_80981052_80983803
ENSMUST00000117962.3	chrX	-	451	3	FSM	ENSMUSG00000081133.3	ENSMUST00000117962.3	451	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGAAGGCAGCACCGTG	NA	False	NA	NA	False	NA	NA	NA	37034479	37029692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_37029729_37031396_37031443_37034110
ENSMUST00000117967.2	chr4	-	564	1	FSM	ENSMUSG00000083979.2	ENSMUST00000117967.2	564	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACAGGCTGAAGAGCT	NA	False	NA	NA	False	NA	NA	NA	59368866	59368302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59368300_59368900
ENSMUST00000117989.2	chr7	+	1317	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	14	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTGCTTGGTTCTCT	NA	False	NA	13	True	AATAAA	-13	NA	79910962	79915122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79911172_79911568_79911680_79914125
ENSMUST00000118001.8	chr17	+	1652	7	FSM	ENSMUSG00000014767.18	ENSMUST00000118001.8	1652	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	125.630963097832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720171	15737689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15735877_15735973_15736965
ENSMUST00000118009.2	chr8	+	2990	8	FSM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	3.64215679542342	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGAGTTTTTAATTAA	NA	False	NA	14	True	AATAAA	-22	NA	67312868	67343216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094_67336256_67338416_67338469_67340424_67340528_67341712
ENSMUST00000118010.2	chr9	-	750	1	FSM	ENSMUSG00000082465.2	ENSMUST00000118010.2	750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5785	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	8765	False	NA	NA	False	NA	NA	NA	53601583	53600833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_53600800_53601600
ENSMUST00000118012.9	chr2	+	1213	4	FSM	ENSMUSG00000078877.12	ENSMUST00000118012.9	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	11.7284080571728	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTGAGTTCTTCCTGT	NA	False	NA	NA	False	NA	NA	NA	176490404	176500411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487
ENSMUST00000118022.8	chr14	-	3374	7	FSM	ENSMUSG00000021944.16	ENSMUST00000118022.8	3374	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.67045259092421	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCGAAGTCTTTTCTAA	NA	False	NA	NA	False	AATAAA	-19	NA	63482697	63436370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442205_63477984_63479095_63482599
ENSMUST00000118048.2	chr11	-	411	1	FSM	ENSMUSG00000081604.6	ENSMUST00000118048.2	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	703	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATTTTTGTTTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	93928454	93928043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_93928000_93928500
ENSMUST00000118069.2	chr4	-	1212	1	FSM	ENSMUSG00000083011.2	ENSMUST00000118069.2	1212	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGGACCACTTTGTGCA	NA	False	NA	NA	False	AAGAAA	-31	NA	112813483	112812271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_112812300_112813500
ENSMUST00000118097.8	chr5	-	1232	7	FSM	ENSMUSG00000015806.13	ENSMUST00000118097.8	1232	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	385.068680742655	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTCTTTTTCACTCA	NA	False	NA	-19	True	AATAAA	-15	NA	45607513	45591394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607431
ENSMUST00000118108.2	chr2	-	1431	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	117.809081109381	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCCACATTTGTATTA	2821	False	NA	-42	True	NA	NA	NA	34689740	34669248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
ENSMUST00000118108.2-0	chr2	-	2802	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	-26	-1345	0	-336	multi-exon	FALSE	canonical	3	85	junction_7	117.809081109381	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCTTCCATTATTTGGT	2795	False	NA	0	True	AATAAA	-18	NA	34689766	34667903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
ENSMUST00000118110.3	chr7	-	1129	5	FSM	ENSMUSG00000042659.16	ENSMUST00000118110.3	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_4	68.2289344779764	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGCCTTCACTGTTAAA	NA	False	NA	69	True	NA	NA	NA	68398936	68391258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_68391650_68392319_68392423_68394529_68394678_68394892_68394960_68398516
ENSMUST00000118118.8	chr3	+	3981	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	69.2431178890726	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTCAGATGTATTCAC	NA	False	NA	16	True	AATAAA	-17	NA	55019586	55044738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUST00000118120.8	chr6	-	2115	5	FSM	ENSMUSG00000030170.15	ENSMUST00000118120.8	2115	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.21416340365355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCCCTCTCCTTA	5017	False	NA	NA	False	ATTAAA	-15	NA	119444172	119409493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_119410818_119417242_119417536_119423295_119423544_119425096_119425234_119444059
ENSMUST00000118121.2	chr5	+	919	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGGTGTTTTCCTAATG	NA	False	NA	9	True	AATAAA	-14	NA	143534500	143537693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143534890_143537163
ENSMUST00000118127.2	chrX	-	1416	1	FSM	ENSMUSG00000082776.4	ENSMUST00000118127.2	1416	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGTGGCTGGGGGATGA	NA	False	NA	NA	False	NA	NA	NA	93817640	93816224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93816200_93817600
ENSMUST00000118129.2	chr14	-	3100	8	FSM	ENSMUSG00000036242.16	ENSMUST00000118129.2	3100	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	11.3730795642829	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTATGCTTGCTTTCT	NA	False	NA	NA	False	CATAAA	-10	NA	50020828	49919124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_49919871_49920068_49920204_49926723_49926756_49988875_49989140_50005865_50006058_50007835_50008085_50010318_50011697_50020724
ENSMUST00000118134.3	chr8	-	3148	21	FSM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_17	74.4114238541368	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCGTGGTCAGTTTGGTC	NA	False	NA	-11	True	ATTAAA	-13	NA	125448722	125398073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUST00000118136.2	chr8	+	4492	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTACTTTAATTATTGT	NA	False	NA	13	True	ATTAAA	-19	NA	121264167	121306065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ENSMUST00000118136.2-0	chr8	+	6556	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	0	-2064	0	0	multi-exon	FALSE	canonical	3	77	junction_6	22.7797180745407	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTTTTTGTATCACCA	NA	False	NA	21	True	AATAAA	-28	NA	121264167	121308129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ENSMUST00000118139.3	chr5	+	3413	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	12.1383212585269	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATCTGGCTTGAATTGG	8701	False	NA	NA	False	NA	NA	NA	127709325	127786438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ENSMUST00000118139.3-0	chr5	+	1644	12	FSM	ENSMUSG00000049971.18	ENSMUST00000118139.3	3413	12	0	1769	0	-1769	multi-exon	TRUE	canonical	3	18	junction_6	12.1383212585269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTACCTGAGAGCCCA	8701	False	NA	31	True	NA	NA	NA	127709325	127784669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ENSMUST00000118152.8	chr15	-	8803	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_4	23.5902522241709	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGGTAGTTTGAAG	NA	False	NA	0	True	AATAAA	-22	NA	103148243	103099970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ENSMUST00000118157.8	chr7	-	2782	12	FSM	ENSMUSG00000041343.20	ENSMUST00000118157.8	2782	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	4.22702834093188	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTACTACTACTAATA	NA	False	NA	NA	False	AATAAA	-17	NA	92286350	92233390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273175_92273296_92274978_92275087_92280706_92280871_92285337
ENSMUST00000118160.8	chr10	+	3970	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTGATTCCTGGCAC	NA	False	NA	NA	False	ATTAAA	-18	NA	67815399	67879698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUST00000118160.8-0	chr10	+	2488	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	128	1354	0	216	multi-exon	FALSE	canonical	3	32	junction_2	17.4900207674628	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTAATCTGCTATTCA	NA	False	NA	24	True	ATTAAA	-21	NA	67815527	67878344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUST00000118161.3	chr17	-	4607	11	FSM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.16116872029975	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCGTGTCCACTGCGGGC	NA	False	NA	0	True	AATAAA	-26	NA	27732380	27644872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620_27722508_27731765
ENSMUST00000118162.8	chr7	-	3091	5	FSM	ENSMUSG00000048012.20	ENSMUST00000118162.8	3091	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	23.9217474278114	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCATCTAGACCCGCG	NA	False	NA	NA	False	AATAAA	-26	NA	44397730	44381432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397652
ENSMUST00000118163.8	chr9	-	10614	44	FSM	ENSMUSG00000041268.18	ENSMUST00000118163.8	10614	44	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_28	15.8606697115632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTAAACTGTTTATTCG	6932	False	NA	0	True	AATAAA	-27	NA	54408910	54272441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54287058_54287122_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ENSMUST00000118174.8	chr5	-	4840	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_9	38.2607155309617	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTTCATAGTTTG	NA	False	NA	-4	True	AATAAA	-13	NA	21087122	20963660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ENSMUST00000118193.8	chr15	+	1671	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	36.9323706252388	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTCCTTTTATTCTT	NA	False	NA	31	True	AGTAAA	-31	NA	5215005	5247817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUST00000118196.8	chr1	+	5796	14	FSM	ENSMUSG00000038866.16	ENSMUST00000118196.8	5796	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	14.3605310511487	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATGCCTTATTGCAAG	NA	False	NA	16	True	AATAAA	-20	NA	105918135	105961804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ENSMUST00000118198.8	chr9	+	893	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_3	95.7131129992124	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTGAATATACCAGAAG	NA	False	NA	NA	False	AATAAA	-34	NA	69919831	69930148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
ENSMUST00000118204.2	chr3	+	2904	6	FSM	ENSMUSG00000027660.17	ENSMUST00000118204.2	2904	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.1249347825594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATCCTTCTCATTAC	1010	False	NA	NA	False	NA	NA	NA	31150981	31173140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ENSMUST00000118218.8	chrX	+	1611	9	FSM	ENSMUSG00000067562.12	ENSMUST00000118218.8	1611	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	65.1257197656963	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101846568	101853548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_101846761_101846861_101847052_101848305_101848480_101848622_101848775_101849096_101849156_101849476_101849614_101850489_101850554_101850740_101850871_101853035
ENSMUST00000118224.2	chr5	-	399	1	FSM	ENSMUSG00000084235.3	ENSMUST00000118224.2	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCCTCTGCTTGTAATAC	NA	False	NA	-97	True	NA	NA	NA	22733717	22733318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_22733300_22733700
ENSMUST00000118229.2	chr6	+	3138	3	FSM	ENSMUSG00000052751.17	ENSMUST00000118229.2	3138	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	21	True	AATAAA	-19	NA	48570824	48576016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48570987_48571724_48571911_48573226
ENSMUST00000118230.2	chr6	-	213	1	FSM	ENSMUSG00000059159.7	ENSMUST00000118230.2	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCCTCTGCGTGTGAC	NA	False	NA	NA	False	NA	NA	NA	52323927	52323714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52323700_52323900
ENSMUST00000118248.2	chr2	+	480	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTCCTGCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	134645868	134646348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_134645900_134646300
ENSMUST00000118261.8	chr5	+	3129	12	FSM	ENSMUSG00000029283.18	ENSMUST00000118261.8	3129	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	77.2190187680738	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	False	NA	9	True	AATAAA	-14	NA	107112426	107132297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_107112700_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUST00000118269.2	chr2	+	318	1	FSM	ENSMUSG00000066068.6	ENSMUST00000118269.2	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCCTCCCCCAATAAAA	NA	False	NA	NA	False	NA	NA	NA	32161856	32162174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32161900_32162200
ENSMUST00000118271.2	chr4	-	849	1	FSM	ENSMUSG00000080916.4	ENSMUST00000118271.2	849	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTCCGTCTCTATCCC	NA	False	NA	NA	False	GGGGCT	-7	NA	44753125	44752276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_44752300_44753100
ENSMUST00000118279.2	chr8	-	2696	15	FSM	ENSMUSG00000001062.19	ENSMUST00000118279.2	2696	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.59195331268843	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCCATGTGACTTGTTC	2305	False	NA	NA	False	AATAAA	-15	NA	123980831	123969097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123969929_123970426_123970535_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
ENSMUST00000118283.8	chr17	-	1388	3	FSM	ENSMUSG00000047407.18	ENSMUST00000118283.8	1388	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	292	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71160541	71151205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71152268_71153166_71153394_71160442
ENSMUST00000118286.8	chr3	+	2789	17	FSM	ENSMUSG00000027668.14	ENSMUST00000118286.8	2789	17	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_5	43.7805250653758	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCTTTAGAAACAGTG	NA	False	NA	9	True	AGTAAA	-26	NA	32585702	32631502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ENSMUST00000118287.9	chr15	+	3129	25	FSM	ENSMUSG00000023007.16	ENSMUST00000118287.9	3129	25	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_20	24.7694578395787	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTACAACTCCTTTGT	NA	False	NA	33	True	TTTAAA	-14	NA	99201164	99214888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ENSMUST00000118307.2	chr11	-	348	1	FSM	ENSMUSG00000083061.2	ENSMUST00000118307.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAAGTTTTCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	49569884	49569536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_49569500_49569900
ENSMUST00000118310.8	chr16	+	1700	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	45.8768732587564	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGCCTTTGTGTAGC	NA	False	NA	1	True	AATAAA	-26	NA	87151114	87165630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
ENSMUST00000118313.8	chr18	-	2893	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_12	94.3352473304061	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12995770	12888384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
ENSMUST00000118316.8	chr5	-	1954	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	0	7028	0	0	multi-exon	FALSE	canonical	3	228	junction_5	18.6010752377383	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTGTTTAGATCCTAA	5437	False	NA	11	True	AATAAA	-32	NA	150589077	150566464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ENSMUST00000118317.8	chr3	-	7939	16	FSM	ENSMUSG00000008730.18	ENSMUST00000118317.8	7939	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	24.1480618039811	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCTGGTTTCAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	103698879	103647130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698708
ENSMUST00000118340.7	chr3	-	6544	24	FSM	ENSMUSG00000062232.15	ENSMUST00000118340.7	6544	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	11.8613604386502	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTAAACTTTTCAT	NA	False	NA	-18	True	AATAAA	-16	NA	79053182	78969834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79053077
ENSMUST00000118352.3	chr11	-	483	1	FSM	ENSMUSG00000083394.3	ENSMUST00000118352.3	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTACGCAAAGAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	115615634	115615151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115615200_115615600
ENSMUST00000118362.8	chr16	-	4248	8	FSM	ENSMUSG00000022498.17	ENSMUST00000118362.8	4248	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	22.088874288812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTCTGAGATTAATGA	8573	False	NA	NA	False	AATAAA	-14	NA	10952475	10903382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ENSMUST00000118366.9	chr17	-	1897	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_4	160.665917948029	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566908	29551049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ENSMUST00000118368.8	chr11	-	696	6	FSM	ENSMUSG00000020415.17	ENSMUST00000118368.8	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	3753.79296179211	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTCAGATTGTGAATA	NA	False	NA	-35	True	AATAAA	-11	NA	43317044	43311099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317015
ENSMUST00000118370.8	chr8	+	4653	13	FSM	ENSMUSG00000055994.16	ENSMUST00000118370.8	4653	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	1.42156017576933	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTACTGAAGCTCTGT	NA	False	NA	NA	False	TATAAA	-22	NA	89373942	89415102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_89374038_89379492_89379960_89387166_89387273_89390325_89392142_89397038_89397123_89397290_89397375_89399302_89399387_89401533_89401618_89402074_89402159_89408241_89408326_89411073_89411158_89413257_89413924_89414187
ENSMUST00000118374.8	chr14	-	1726	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	41.9007573844168	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTGCGTCCAAGTG	NA	False	NA	-6	True	AATAAA	-15	NA	69945033	69934755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
ENSMUST00000118375.8	chr11	-	3288	10	FSM	ENSMUSG00000038517.16	ENSMUST00000118375.8	3288	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	16.2343942158479	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGTGCGCTCAGGCT	7533	False	NA	-6	True	AATAAA	-13	NA	97040872	97027002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97028502_97029447_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97040816
ENSMUST00000118381.8	chr10	+	1323	5	FSM	ENSMUSG00000060733.14	ENSMUST00000118381.8	1323	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	39.274673773311	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTAAAGCTGCT	2289	False	NA	NA	False	AATAAA	-14	NA	71183665	71213246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534
ENSMUST00000118388.2	chr2	+	846	1	FSM	ENSMUSG00000084013.2	ENSMUST00000118388.2	846	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTTAAACAGAGGCCTT	NA	False	NA	NA	False	NA	NA	NA	170126954	170127800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_170127000_170127800
ENSMUST00000118429.8	chr7	-	2774	9	FSM	ENSMUSG00000047554.15	ENSMUST00000118429.8	2774	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	168.070483726322	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTATCTGTCTTCTGTC	NA	False	NA	-5	True	AATACA	-21	NA	109586136	109572691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168_109585453_109585573_109585800_109585924
ENSMUST00000118430.2	chr4	+	226	1	FSM	ENSMUSG00000083558.2	ENSMUST00000118430.2	226	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATATTGTCATTCTCTG	NA	False	NA	NA	False	NA	NA	NA	121956115	121956341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_121956100_121956300
ENSMUST00000118466.8	chr14	-	1567	6	FSM	ENSMUSG00000021792.16	ENSMUST00000118466.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	66.6111101844129	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACCTCTGTGCACA	NA	False	NA	-22	True	AATAAA	-11	NA	40735745	40715696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
ENSMUST00000118470.8	chr3	+	6578	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.1113135725105	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTGGTTCAAGTCAT	NA	False	NA	14	True	AATAAA	-16	NA	31149206	31176722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ENSMUST00000118487.8	chr17	-	2629	12	FSM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	57.0232662389834	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGCGTGAGCCTGC	2001	False	NA	-20	True	AATAAA	-28	NA	26463115	26431686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
ENSMUST00000118493.8	chr7	+	922	6	FSM	ENSMUSG00000038695.14	ENSMUST00000118493.8	922	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	23.6016948543955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGCCTCAATAAATCTG	4834	False	NA	-7	True	NA	NA	NA	44117495	44121045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44117615_44117729_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUST00000118498.8	chr10	-	2841	14	FSM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	76.7224306246012	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332160	81322290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUST00000118499.2	chr2	-	750	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	NA	False	NA	NA	False	NA	NA	NA	75022166	75021416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_75021400_75022200
ENSMUST00000118501.8	chr7	-	684	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_2	86.0883267348135	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGATCTGCATTTTG	NA	False	NA	NA	False	NA	NA	NA	35346946	35341406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
ENSMUST00000118504.9	chr17	-	2474	16	FSM	ENSMUSG00000024039.16	ENSMUST00000118504.9	2474	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	69.6264317626575	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGTGTCGACCTTATTT	1872	False	NA	-16	True	NA	NA	NA	31856212	31831613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
ENSMUST00000118515.9	chr7	-	1662	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	346.110162950988	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCCTTCTGTGCTTG	NA	False	NA	-1	True	ATTAAA	-31	NA	44145830	44139534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUST00000118517.2	chr4	+	552	1	FSM	ENSMUSG00000082062.2	ENSMUST00000118517.2	552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCTCTGTGCCTTCCAA	NA	False	NA	NA	False	NA	NA	NA	125398080	125398632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_125398100_125398600
ENSMUST00000118522.8	chr16	-	3973	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_10	93.8519042470415	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTGTATCTTGCTGG	NA	False	NA	0	True	ATTAAA	-18	NA	90841431	90810924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ENSMUST00000118533.2	chr5	+	438	1	FSM	ENSMUSG00000062353.7	ENSMUST00000118533.2	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1818	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATCCCATGCACGGCTT	NA	False	NA	NA	False	AATACA	-33	NA	3286430	3286868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3286400_3286900
ENSMUST00000118535.9	chr8	+	1419	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.326360361884	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTACACTGTCCTGCTC	NA	False	NA	12	True	AATAAA	-21	NA	124532723	124562026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
ENSMUST00000118539.2	chr3	-	1815	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_5	60.9754048777046	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	False	NA	-16	True	AATAAA	-18	NA	157630714	157599884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ENSMUST00000118543.8	chr5	-	1193	5	FSM	ENSMUSG00000047215.15	ENSMUST00000118543.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	9546	junction_4	1705.30515964152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTCCTTGTCTTTT	NA	False	NA	-6	True	AATAAA	-16	NA	65548348	65545706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ENSMUST00000118551.8	chr18	+	602	5	FSM	ENSMUSG00000024608.12	ENSMUST00000118551.8	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	11592.6756914657	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTTGGTTCTGGTGT	NA	False	NA	63	True	AATAAA	-13	NA	60907752	60911613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60907854_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUST00000118556.9	chr7	-	4566	25	FSM	ENSMUSG00000031075.20	ENSMUST00000118556.9	4566	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.1820329449413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	144292303	144142285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292096
ENSMUST00000118557.8	chr3	+	2424	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTCAGAAAGGGTCAAAA	NA	False	NA	3	True	AATAAA	-19	NA	96542745	96552682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
ENSMUST00000118557.8-0	chr3	+	1542	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	242	640	0	0	multi-exon	FALSE	canonical	3	279	junction_3	9.46337971105226	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542987	96552042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
ENSMUST00000118558.5	chr6	-	315	4	FSM	ENSMUSG00000023089.13	ENSMUST00000118558.5	315	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1436.47492920072	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTCCATGTTATTG	-4	True	NA	-31	True	ATTAAA	-27	NA	24527569	24518664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_24518824_24519190_24519257_24527271_24527317_24527524
ENSMUST00000118566.8	chr3	+	2190	9	FSM	ENSMUSG00000027940.19	ENSMUST00000118566.8	2190	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	1696.75041899951	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGACCGGCTTGACTT	NA	False	NA	13	True	AATAAA	-16	NA	89986960	90008203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89996354_89996431_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ENSMUST00000118570.2	chr17	+	1898	5	FSM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	2173.91908485574	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCTCTGGTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	27775641	27782637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUST00000118576.8	chr5	-	1874	3	FSM	ENSMUSG00000041609.17	ENSMUST00000118576.8	1874	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTGCCTCAGTTCCT	NA	False	NA	-3	True	AATAAA	-14	NA	115791045	115786235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115787629_115789877_115789999_115790685
ENSMUST00000118578.9	chr14	-	2144	4	FSM	ENSMUSG00000021848.17	ENSMUST00000118578.9	2144	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	16.8720676464584	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTCTAGTTTAAT	NA	False	NA	-3	True	ATTAAA	-14	NA	48902563	48895135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_48896784_48898755_48898908_48899900_48900117_48902435
ENSMUST00000118583.8	chr7	-	4726	29	FSM	ENSMUSG00000040488.19	ENSMUST00000118583.8	4726	29	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_23	117.369222706702	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAACCTCATTACAG	NA	False	NA	NA	False	AATAAA	-35	NA	27033038	27005422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ENSMUST00000118592.8	chr19	-	6445	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_2	9.58239125804317	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGTTGATGGCGTCT	5197	False	NA	-1	True	ATTAAA	-22	NA	56810622	56775912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ENSMUST00000118609.2	chr4	+	747	1	FSM	ENSMUSG00000083081.2	ENSMUST00000118609.2	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGTTCTTTGCTAAGCC	NA	False	NA	NA	False	NA	NA	NA	145182202	145182949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145182200_145182900
ENSMUST00000118612.8	chr10	+	1522	7	FSM	ENSMUSG00000040195.12	ENSMUST00000118612.8	1522	7	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_4	19.2411595862157	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGAGTTTGACTACTCT	NA	False	NA	NA	False	AATAAA	-23	NA	127512932	127531037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297
ENSMUST00000118622.2	chr8	+	2768	12	FSM	ENSMUSG00000037134.18	ENSMUST00000118622.2	2768	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	48.530130369895	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGTATGTAACATTAT	NA	False	NA	13	True	AATAAA	-18	NA	78276038	78307967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287606_78289044_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ENSMUST00000118623.2	chr19	-	2406	12	FSM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	287.667249232497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1351	False	NA	-26	True	AATAAA	-14	NA	5962820	5947414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5953758_5953801_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUST00000118627.2	chr11	-	831	5	FSM	ENSMUSG00000023764.19	ENSMUST00000118627.2	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	37.5724300518346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACACTCTGCACTTTGTT	8018	False	NA	NA	False	NA	NA	NA	3143424	3135567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3135975_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ENSMUST00000118628.8	chr7	+	864	5	FSM	ENSMUSG00000038695.14	ENSMUST00000118628.8	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	14.4460202131937	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTGCCTGGGCTCA	4807	False	NA	20	True	AATAAA	-12	NA	44117468	44121072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44117615_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUST00000118630.2	chr2	+	2308	3	FSM	ENSMUSG00000082724.4	ENSMUST00000118630.2	2308	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	4.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAACATTTCTAATTCTT	NA	False	NA	NA	False	NA	NA	NA	176830452	176834124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_176830574_176830784_176830852_176832004
ENSMUST00000118648.8	chr4	+	3818	22	FSM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	15.0256017344728	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAAAGAGTCATGCGCT	NA	False	NA	28	True	TATAAA	-17	NA	152171314	152199847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ENSMUST00000118703.8	chr16	-	2554	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	186.698259231306	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4608156	4584704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ENSMUST00000118709.2	chr2	-	624	1	FSM	ENSMUSG00000083481.5	ENSMUST00000118709.2	624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACTCGTAGTGTAATA	8779	False	NA	NA	False	NA	NA	NA	175597399	175596775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_175596800_175597400
ENSMUST00000118726.8	chr7	-	2855	12	FSM	ENSMUSG00000044465.20	ENSMUST00000118726.8	2855	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	116.98315199737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	False	NA	-11	True	TATAAA	-13	NA	105049215	105027817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ENSMUST00000118729.8	chr15	+	4241	8	FSM	ENSMUSG00000046897.18	ENSMUST00000118729.8	4241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	56.9883625785805	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCTCTTTGAGAAGACT	906	False	NA	24	True	AATAAA	-25	NA	102112082	102124040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ENSMUST00000118750.2	chr7	-	468	1	FSM	ENSMUSG00000083626.2	ENSMUST00000118750.2	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTATCAGAGCCTTCTT	NA	False	NA	NA	False	AAGAAA	-39	NA	139240071	139239603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139239600_139240100
ENSMUST00000118762.9	chr17	+	3853	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	75.1962247870345	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171395	29188523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUST00000118770.2	chr11	-	1845	1	FSM	ENSMUSG00000081965.2	ENSMUST00000118770.2	1845	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGGTTACCTGAACAGCT	NA	False	NA	NA	False	NA	NA	NA	105057446	105055601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_105055600_105057400
ENSMUST00000118784.8	chr11	+	1404	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	110.143939915004	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCTCTATTTGTGGG	NA	False	NA	19	True	AATAAA	-19	NA	88095236	88102333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUST00000118786.2	chr2	+	435	1	FSM	ENSMUSG00000083097.4	ENSMUST00000118786.2	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCCAGATACCAACAAGA	NA	False	NA	NA	False	NA	NA	NA	153668090	153668525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153668100_153668500
ENSMUST00000118788.8	chr17	+	1191	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	27.6812210713328	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTTATGGACTCTTT	NA	False	NA	11	True	AAAAAG	-24	NA	25069463	25083424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUST00000118791.2	chrX	+	801	1	FSM	ENSMUSG00000067147.8	ENSMUST00000118791.2	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1044	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACACTGAATTTTCTGT	NA	False	NA	NA	False	AAAAAG	-36	NA	165637206	165638007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_165637200_165638000
ENSMUST00000118800.8	chr19	-	3531	19	FSM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	3.34257976810918	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGGGTTTCCCTTGTA	NA	False	NA	NA	False	AATAAA	-11	NA	56996630	56900792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56996582
ENSMUST00000118808.9	chr7	-	1872	7	FSM	ENSMUSG00000008140.19	ENSMUST00000118808.9	1872	7	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATTTCTTGGTTCATTCC	NA	False	NA	28	True	NA	NA	NA	44145953	44139360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUST00000118816.6	chr5	-	1307	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	54.1833922895199	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGGTGAGATAATTTC	NA	False	NA	-4	True	AATAAA	-16	NA	90371831	90362582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
ENSMUST00000118821.8	chrX	+	3698	5	FSM	ENSMUSG00000067360.13	ENSMUST00000118821.8	3698	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	43.9964487203229	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCATGAGATTCATTTA	NA	False	NA	NA	False	AGTAAA	-16	NA	134203055	134213401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134203188_134203385_134203513_134208081_134208382_134209685_134210271_134210847
ENSMUST00000118828.8	chr17	-	3271	12	FSM	ENSMUSG00000037098.19	ENSMUST00000118828.8	3271	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	30.3584644479322	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTTCTTTCTCCACAG	3381	False	NA	0	True	ATTAAA	-19	NA	26240834	26208009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26240661
ENSMUST00000118829.2	chr5	-	483	1	FSM	ENSMUSG00000083833.5	ENSMUST00000118829.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTCCTGCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	115940218	115939735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115939700_115940200
ENSMUST00000118830.8	chr5	+	1014	5	FSM	ENSMUSG00000029462.19	ENSMUST00000118830.8	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	833.067074130289	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCTTGAAAACCTGT	695	False	NA	17	True	AATAAA	-17	NA	122492447	122501349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122492540_122494856_122494869_122498075_122498268_122500098_122500335_122500867
ENSMUST00000118835.8	chr8	-	6426	14	FSM	ENSMUSG00000045636.17	ENSMUST00000118835.8	6426	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	34.2909583197263	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATCTTGAGTCCTTGC	NA	False	NA	-6	True	TATAAA	-41	NA	41567704	41443954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41567576
ENSMUST00000118850.8	chr8	-	992	5	FSM	ENSMUSG00000055553.17	ENSMUST00000118850.8	992	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	297.008733036589	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGGAGTACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	70975929	70966253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975827
ENSMUST00000118853.8	chr3	+	3841	5	FSM	ENSMUSG00000027955.17	ENSMUST00000118853.8	6729	5	0	2888	0	-2886	multi-exon	FALSE	canonical	0	0	junction_1	2.77263412660235	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGTTTTCAGTTTTG	NA	False	NA	NA	False	AATAAA	-29	NA	79791839	79850699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_79791998_79793294_79794438_79815895_79816111_79843901_79844129_79848601
ENSMUST00000118856.8	chr8	+	2366	9	FSM	ENSMUSG00000008129.15	ENSMUST00000118856.8	2366	9	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	4.49826355386165	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGATCTGTAGCTGTG	2017	False	NA	5	True	AATAAA	-15	NA	84874787	84899219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ENSMUST00000118863.2	chr6	+	567	1	FSM	ENSMUSG00000053173.13	ENSMUST00000118863.2	567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	927	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGATCTTAACTGTTAA	NA	False	NA	NA	False	NA	NA	NA	128290319	128290886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_128290300_128290900
ENSMUST00000118869.8	chr9	+	2540	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	29.6118879054586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGGGTCTCATTATTT	NA	False	NA	3	True	TATAAA	-14	NA	78016473	78075220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ENSMUST00000118875.8	chr6	-	1420	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	0	0	0	0	multi-exon	FALSE	canonical	3	6089	junction_1	1931.60920967179	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCCTTGGTTTTAATG	NA	False	NA	-16	True	AATAAA	-14	NA	125142736	125138816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUST00000118878.8	chrX	+	7210	38	FSM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	54.4176286265063	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGAGTGATTTTAAGTAG	4090	False	NA	NA	False	AATAAA	-24	NA	100576339	100644640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ENSMUST00000118882.2	chr5	-	1984	3	FSM	ENSMUSG00000044681.20	ENSMUST00000118882.2	1984	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	2	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAAACTTGCATGAAT	NA	False	NA	-6	True	ATTAAA	-17	NA	28415020	28407446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_28408435_28412284_28412382_28414121
ENSMUST00000118886.9	chr9	+	3163	7	FSM	ENSMUSG00000038145.18	ENSMUST00000118886.9	4811	7	18	1630	0	597	multi-exon	FALSE	canonical	3	10	junction_2	9.08142181721685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8271	False	NA	NA	False	NA	NA	NA	121946383	121997138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121946474_121960958_121961009_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ENSMUST00000118898.8	chr10	-	1404	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	0	764	0	0	multi-exon	FALSE	canonical	3	179	junction_6	104.074166337115	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUST00000118902.8	chr4	-	1887	10	FSM	ENSMUSG00000032897.18	ENSMUST00000118902.8	1887	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	134.081235740792	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120688769	120614634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120688637
ENSMUST00000118924.2	chrX	+	621	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	95528464	95529085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_95528500_95529100
ENSMUST00000118927.8	chr7	+	2410	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	0	0	0	0	multi-exon	TRUE	canonical	3	240	junction_5	25.4348893009189	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	9	True	AATAAA	-20	NA	48438750	48477188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUST00000118928.2	chr2	+	1365	1	FSM	ENSMUSG00000082536.2	ENSMUST00000118928.2	1365	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTACCCCTAACACCTGC	NA	False	NA	NA	False	NA	NA	NA	40445763	40447128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_40445800_40447100
ENSMUST00000118936.8	chr10	-	2843	6	FSM	ENSMUSG00000033416.16	ENSMUST00000118936.8	2843	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	31.7616120497685	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACAGTGGTAGCACCCTTT	NA	False	NA	-13	True	AATAAA	-11	NA	75353806	75342658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75353693
ENSMUST00000118937.2	chr4	+	634	1	FSM	ENSMUSG00000082352.2	ENSMUST00000118937.2	634	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTCTGGTGCAGTTTT	NA	False	NA	-74	True	NA	NA	NA	145301097	145301731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145301100_145301700
ENSMUST00000118947.2	chr1	-	820	1	FSM	ENSMUSG00000082588.2	ENSMUST00000118947.2	820	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATGTGGTAAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	148901789	148900969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_148901000_148901800
ENSMUST00000118948.2	chrX	-	2347	1	FSM	ENSMUSG00000082319.4	ENSMUST00000118948.2	2347	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2649	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAGAGAGAGAAAG	9723	False	NA	NA	False	AATAAA	-20	NA	80866336	80863989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_80864000_80866300
ENSMUST00000118962.8	chr7	+	2494	11	FSM	ENSMUSG00000030731.14	ENSMUST00000118962.8	2494	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3.88458491991101	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCACCTGTCTCCCTGGG	NA	False	NA	16	True	AATAAA	-18	NA	44033525	44049453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44033601_44034229_44034374_44035379_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ENSMUST00000118976.9	chr7	-	2175	14	FSM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	66.2157134678708	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTTGAACTGTGCTGC	NA	False	NA	-8	True	ATTAAA	-14	NA	16020715	16007969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16008342_16009180_16009301_16009662_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
ENSMUST00000118978.2	chr4	+	1389	1	FSM	ENSMUSG00000070610.5	ENSMUST00000118978.2	1389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGTAGCAGAAACCAGGG	NA	False	NA	NA	False	NA	NA	NA	144313813	144315202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_144313800_144315200
ENSMUST00000118982.2	chr8	+	367	1	FSM	ENSMUSG00000083911.2	ENSMUST00000118982.2	367	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAGATGACAACGACAAT	4452	False	NA	NA	False	NA	NA	NA	124580567	124580934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124580600_124580900
ENSMUST00000118998.2	chr5	+	402	1	FSM	ENSMUSG00000080893.2	ENSMUST00000118998.2	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	460	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGTGAAGACTGTTCCT	3491	False	NA	NA	False	NA	NA	NA	130217235	130217637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130217200_130217600
ENSMUST00000119002.2	chr3	-	568	4	FSM	ENSMUSG00000028062.16	ENSMUST00000119002.2	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	1254.14043161929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTCACCTGCTTT	1142	False	NA	-7	True	AATAAA	-13	NA	88460166	88457126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460036
ENSMUST00000119003.2	chr8	+	2920	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	7.78888096369861	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	False	NA	29	True	AATAAA	-17	NA	72676695	72688473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
ENSMUST00000119010.8	chrX	-	3007	3	FSM	ENSMUSG00000033436.14	ENSMUST00000119010.8	3007	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGTTCTGGTGCTTTA	NA	False	NA	-1	True	AATAAA	-21	NA	133708274	133704893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133707763_133708010_133708077_133708202
ENSMUST00000119014.8	chr5	+	4573	13	FSM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_6	9.64761052742537	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTTTGTCTGTTTTCT	NA	False	NA	NA	False	AATAAA	-25	NA	108460474	108497221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
ENSMUST00000119023.8	chr16	+	1048	9	FSM	ENSMUSG00000039200.17	ENSMUST00000119023.8	1048	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	24.2474225434375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAATTACAGACTTGTT	NA	False	NA	NA	False	AGTAAA	-25	NA	10010769	10055152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029
ENSMUST00000119026.8	chr5	+	5134	9	FSM	ENSMUSG00000034324.17	ENSMUST00000119026.8	5134	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.8328597873269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTCTCGTGGGACGT	NA	False	NA	NA	False	ATTAAA	-21	NA	127318871	127642857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_127319085_127436618_127437505_127539967_127540115_127581925_127582110_127613421_127613566_127628566_127628773_127630137_127630412_127631689_127631882_127639969
ENSMUST00000119026.8-0	chr5	+	3827	9	FSM	ENSMUSG00000034324.17	ENSMUST00000119026.8	5134	9	0	1307	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.8328597873269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGTTTATATTTCTAA	NA	False	NA	NA	False	AATAAA	-17	NA	127318871	127641550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_127319085_127436618_127437505_127539967_127540115_127581925_127582110_127613421_127613566_127628566_127628773_127630137_127630412_127631689_127631882_127639969
ENSMUST00000119031.8	chr2	+	2477	11	FSM	ENSMUSG00000027259.16	ENSMUST00000119031.8	2477	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	26.5369553641709	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970978	120987159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120971091_120972573_120972785_120973004_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
ENSMUST00000119033.8	chr8	+	4624	13	FSM	ENSMUSG00000036779.13	ENSMUST00000119033.8	4624	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	34.7235110871902	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	14	True	AGTAAA	-15	NA	88925840	88986350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ENSMUST00000119035.9	chrX	-	2691	11	FSM	ENSMUSG00000045802.14	ENSMUST00000119035.9	2691	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	7.93977329651168	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTTTTCATGGCATCAT	NA	False	NA	NA	False	AATAAA	-10	NA	95499900	95349783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_95351419_95356633_95356734_95358396_95358613_95363891_95364023_95364209_95364292_95365602_95365665_95365900_95365977_95373119_95373245_95382022_95382151_95400740_95400850_95499873
ENSMUST00000119041.8	chr7	-	2979	7	FSM	ENSMUSG00000030452.17	ENSMUST00000119041.8	2979	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	81.5127801840505	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55611993	55581034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611934
ENSMUST00000119047.8	chr5	+	726	5	FSM	ENSMUSG00000067365.12	ENSMUST00000119047.8	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	95.0167748347627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTTTTTATACTATTTA	NA	False	NA	11	True	NA	NA	NA	38417727	38425251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38425041
ENSMUST00000119052.2	chr11	-	395	1	FSM	ENSMUSG00000082110.2	ENSMUST00000119052.2	395	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCACATGAAAGACTGAAA	NA	False	NA	NA	False	NA	NA	NA	78476381	78475986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78476000_78476400
ENSMUST00000119057.2	chr2	+	891	1	FSM	ENSMUSG00000082064.4	ENSMUST00000119057.2	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTTTCTATGAAGATT	9416	False	NA	NA	False	NA	NA	NA	154545728	154546619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_154545700_154546600
ENSMUST00000119064.2	chr1	-	1124	1	FSM	ENSMUSG00000082935.4	ENSMUST00000119064.2	1124	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTATGAAAATGATTTT	NA	False	NA	NA	False	NA	NA	NA	21583280	21582156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_21582200_21583300
ENSMUST00000119078.8	chr10	-	4287	13	FSM	ENSMUSG00000025409.15	ENSMUST00000119078.8	4287	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	21.7579806558932	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGACTCTGTACTCATT	NA	False	NA	-6	True	NA	NA	NA	127124887	127117824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ENSMUST00000119109.8	chr3	+	5309	5	FSM	ENSMUSG00000003382.19	ENSMUST00000119109.8	5309	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.4605906259718	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATGTTTGCTGAGTAT	NA	False	NA	NA	False	ATTAAA	-24	NA	87432713	87447463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87432967_87434567_87434624_87435176_87435415_87436530_87436647_87442817
ENSMUST00000119120.2	chr11	-	4460	22	FSM	ENSMUSG00000040712.17	ENSMUST00000119120.2	4460	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	5.19680697362221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTCCGGCCTCTCTCTG	8377	False	NA	-1	True	ATTAAA	-16	NA	70578781	70560289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561833_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ENSMUST00000119131.3	chr16	+	3781	11	FSM	ENSMUSG00000040785.20	ENSMUST00000119131.3	3781	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	14.2197046382828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCACTTTTGTAGAACT	NA	False	NA	NA	False	AGTAAA	-12	NA	94171656	94198054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94195193
ENSMUST00000119135.2	chr7	+	1371	1	FSM	ENSMUSG00000083500.2	ENSMUST00000119135.2	1371	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGATGCCATTCTTGTAG	NA	False	NA	NA	False	CATAAA	-3	NA	41139774	41141145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_41139800_41141100
ENSMUST00000119140.2	chr4	+	483	1	FSM	ENSMUSG00000081559.4	ENSMUST00000119140.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGACACAAAGAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	45550016	45550499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45550000_45550500
ENSMUST00000119149.8	chr2	-	1458	4	FSM	ENSMUSG00000078880.11	ENSMUST00000119149.8	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	105.749179140497	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	176328136	176315986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_176317159_176317363_176317491_176324514_176324570_176328032
ENSMUST00000119161.9	chr1	+	7480	51	FSM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_6	73.7537117710017	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	False	NA	25	True	AATAAA	-24	NA	150269000	150325686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ENSMUST00000119166.8	chr1	+	6368	13	FSM	ENSMUSG00000038866.16	ENSMUST00000119166.8	6368	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	12.1609575646365	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTAAGAATTATGCCTTA	NA	False	NA	9	True	AATAAA	-13	NA	105918418	105961797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481
ENSMUST00000119190.2	chrX	+	1585	2	FSM	ENSMUSG00000047797.15	ENSMUST00000119190.2	1585	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTTGAGTGTTGAA	NA	False	NA	NA	False	ATTAAA	-22	NA	100427341	100429235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100427449_100427757
ENSMUST00000119223.2	chr7	-	3499	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_12	21.1073644336126	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACATTTTCATTTGGCC	NA	False	NA	-1	True	ATTAAA	-17	NA	48531344	48516176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ENSMUST00000119227.3	chr17	-	452	4	FSM	ENSMUSG00000024208.17	ENSMUST00000119227.3	452	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1369.72560106841	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTCCTGGTTTGGAACT	1961	False	NA	-5	True	AATAAA	-17	NA	27352876	27341643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27341815_27344120_27344191_27344857_27344906_27352713
ENSMUST00000119245.8	chr9	-	4211	16	FSM	ENSMUSG00000032386.16	ENSMUST00000119245.8	4211	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	81.2253381375267	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65815958	65739040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209_65792530_65803978_65804213_65805658_65805811_65815720
ENSMUST00000119251.8	chr3	+	3488	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_9	15.3260852434302	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGAGATTCTTCTGCT	6582	False	NA	22	True	NA	NA	NA	88049722	88077237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ENSMUST00000119251.8-0	chr3	+	5688	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	-44	-2156	0	0	multi-exon	FALSE	canonical	3	119	junction_9	15.3260852434302	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTTTGGGTTTTGATT	6538	False	NA	17	True	ATTAAA	-29	NA	88049678	88079393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ENSMUST00000119261.8	chr8	+	4645	29	FSM	ENSMUSG00000036270.17	ENSMUST00000119261.8	4645	29	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_18	83.7903344847198	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTGTGTGATTTTAGTT	3326	False	NA	14	True	AATAAA	-6	NA	106607582	106619840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUST00000119273.2	chr16	-	778	4	FSM	ENSMUSG00000022706.17	ENSMUST00000119273.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	827.835061403471	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGTATCTGTCTTTTG	NA	False	NA	-24	True	AATAAA	-7	NA	18695289	18690975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18691413_18692286_18692446_18694073_18694187_18695220
ENSMUST00000119274.3	chr17	-	3354	14	FSM	ENSMUSG00000024006.18	ENSMUST00000119274.3	3354	14	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_13	173.563487011723	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226969	29189853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
ENSMUST00000119278.8	chr7	-	2394	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	50.6814500088543	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGACCAACTTTATGA	NA	False	NA	-16	True	AATAAA	-17	NA	112968599	112914849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
ENSMUST00000119284.8	chr17	-	4743	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	36.6411106225551	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAACAAAACAGG	NA	False	NA	NA	False	NA	NA	NA	79328245	79257977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ENSMUST00000119297.2	chrX	+	1386	3	FSM	ENSMUSG00000095599.2	ENSMUST00000119297.2	1386	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCACAGTCCAACACATT	NA	False	NA	NA	False	NA	NA	NA	134249769	134252772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134250060_134250503_134251086_134252258
ENSMUST00000119299.8	chrX	+	5217	23	FSM	ENSMUSG00000034160.14	ENSMUST00000119299.8	3840	23	34	-1411	0	0	multi-exon	FALSE	canonical	3	98	junction_1	138.801667470395	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683699	100727957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ENSMUST00000119306.2	chrX	-	2091	5	FSM	ENSMUSG00000031137.18	ENSMUST00000119306.2	2091	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	33.9042770163294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACTTCAATGTGTGTT	NA	False	NA	NA	False	AATAAA	-25	NA	58211524	58107504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58211372
ENSMUST00000119311.8	chr13	-	2627	4	FSM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	210.944437128727	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGCTGCTCTCTCA	NA	False	NA	-24	True	AATAAA	-17	NA	53083690	53061080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_53063352_53073036_53073125_53073234_53073303_53083490
ENSMUST00000119328.2	chrX	+	483	1	FSM	ENSMUSG00000068014.6	ENSMUST00000119328.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACACAAAGAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	46989221	46989704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_46989200_46989700
ENSMUST00000119344.8	chr3	-	1879	3	FSM	ENSMUSG00000027805.17	ENSMUST00000119344.8	1879	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCCATTGGACTCCT	NA	False	NA	-6	True	AATAAA	-13	NA	57754566	57749325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_57750736_57752594_57752788_57754290
ENSMUST00000119345.2	chrX	+	563	1	FSM	ENSMUSG00000083906.2	ENSMUST00000119345.2	563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAGCAAATATGTACAA	NA	False	NA	NA	False	CATAAA	-41	NA	158371460	158372023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158371500_158372000
ENSMUST00000119353.9	chr8	+	1720	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	528.343741682439	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980373	70987978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUST00000119368.8	chr16	+	7529	7	FSM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	146.545120090101	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTGTGCAAAATCACGC	NA	False	NA	8	True	AATAAA	-19	NA	91444766	91462596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
ENSMUST00000119379.2	chr6	+	455	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_3	851.269770532363	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATGTTTCTGATGACAA	NA	False	NA	30	True	ATTAAA	-39	NA	39569516	39576405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
ENSMUST00000119383.2	chr7	-	555	1	FSM	ENSMUSG00000081895.4	ENSMUST00000119383.2	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATAAAATAAAGGC	7688	False	NA	NA	False	AAGAAA	-34	NA	72299059	72298504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_72298500_72299100
ENSMUST00000119417.2	chr3	+	2191	1	FSM	ENSMUSG00000082896.2	ENSMUST00000119417.2	2191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGAACTATGTGTTT	8464	False	NA	NA	False	NA	NA	NA	18062969	18065160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_18063000_18065200
ENSMUST00000119438.2	chr2	-	645	1	FSM	ENSMUSG00000080859.2	ENSMUST00000119438.2	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAATAGTTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	105385190	105384545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_105384500_105385200
ENSMUST00000119468.2	chr16	+	4068	3	FSM	ENSMUSG00000022686.15	ENSMUST00000119468.2	2229	3	0	-1839	0	0	multi-exon	FALSE	canonical	3	9	junction_1	50.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTAATGTGAATTTAA	NA	False	NA	7	True	AATAAA	-15	NA	19579803	19591213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_19580045_19583857_19583965_19587493
ENSMUST00000119471.2	chr4	-	1293	1	FSM	ENSMUSG00000084133.2	ENSMUST00000119471.2	1293	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAATGGACTGCTACATC	9335	False	NA	NA	False	NA	NA	NA	118800549	118799256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_118799300_118800500
ENSMUST00000119472.8	chr9	-	1190	6	FSM	ENSMUSG00000032470.18	ENSMUST00000119472.8	1190	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	193.993195756965	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGGCGAAGCCCCAAG	NA	False	NA	28	True	ATTAAA	-15	NA	99307949	99270031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99307829
ENSMUST00000119486.9	chr17	+	1640	5	FSM	ENSMUSG00000046711.17	ENSMUST00000119486.9	1030	5	39	-649	0	0	multi-exon	FALSE	canonical	3	1035	junction_1	1821.9597964829	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775626	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ENSMUST00000119496.2	chr6	-	615	1	FSM	ENSMUSG00000080932.4	ENSMUST00000119496.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACATGATATTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	122675987	122675372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122675400_122676000
ENSMUST00000119527.8	chr6	+	2840	9	FSM	ENSMUSG00000038271.18	ENSMUST00000119527.8	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	15.028618532653	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGAGCCTGCTTCACCT	8227	False	NA	11	True	AATAAA	-18	NA	125122203	125138745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
ENSMUST00000119541.2	chr7	+	555	1	FSM	ENSMUSG00000066543.9	ENSMUST00000119541.2	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATAAAATAAAGGC	NA	False	NA	NA	False	AAGAAA	-34	NA	35817698	35818253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_35817700_35818300
ENSMUST00000119558.9	chr7	-	3110	4	FSM	ENSMUSG00000070814.18	ENSMUST00000119558.9	3110	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.17856276425687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCAGGCTGAGTTCGTGG	1682	False	NA	-5	True	AATAAA	-15	NA	13012609	12992893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12995567_13003459_13003574_13011071_13011355_13012569
ENSMUST00000119559.8	chr1	-	1385	10	FSM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	165.875529714376	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	-5	True	AATGAA	-16	NA	67077993	67042533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077930
ENSMUST00000119567.8	chr10	+	4130	18	FSM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	9.76718607764962	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62816020	62849734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ENSMUST00000119571.2	chrX	-	408	1	FSM	ENSMUSG00000083621.2	ENSMUST00000119571.2	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTATGCCATATTTTCA	NA	False	NA	NA	False	AAAACA	-19	NA	51861626	51861218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_51861200_51861600
ENSMUST00000119582.3	chr6	+	4518	3	FSM	ENSMUSG00000030031.15	ENSMUST00000119582.3	4518	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	31	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACTAGTTAGTATTAACA	NA	False	NA	90	True	ATTAAA	-23	NA	95094860	95106771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_95094956_95098719_95099829_95103457
ENSMUST00000119591.2	chr19	-	3481	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	45.2515193115104	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAATCTCTACTCATT	NA	False	NA	-2	True	ATTAAA	-14	NA	44095916	44061774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ENSMUST00000119597.8	chr10	+	2837	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	14.8148334428987	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	24	True	AATAAA	-17	NA	23672883	23703866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ENSMUST00000119599.3	chr16	-	4748	3	FSM	ENSMUSG00000039789.8	ENSMUST00000119599.3	1842	3	0	-2906	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAACTGTTATTTCTGA	4390	False	NA	-4	True	AATAAA	-37	NA	3702425	3680247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_3684595_3689013_3689141_3702151
ENSMUST00000119606.8	chr10	+	2988	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	0	-1147	0	1132	multi-exon	FALSE	canonical	3	10	junction_1	36.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTCCGGTAGAATCCACT	NA	False	NA	6	True	AATAAA	-15	NA	80972382	80985424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80972494_80979795_80981052_80983803
ENSMUST00000119608.2	chr11	-	498	1	FSM	ENSMUSG00000082419.4	ENSMUST00000119608.2	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAACAAGAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	82918823	82918325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82918300_82918800
ENSMUST00000119628.8	chr11	+	4664	19	FSM	ENSMUSG00000018401.18	ENSMUST00000119628.8	4664	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	32.1891113404656	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCACTTCCCCCATGT	NA	False	NA	3	True	AATAAA	-16	NA	87483722	87505998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87483853_87484214_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ENSMUST00000119633.8	chr19	+	2267	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	141.985771060601	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800028	60824665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUST00000119640.8	chrX	-	2075	5	FSM	ENSMUSG00000035062.14	ENSMUST00000119640.8	2075	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.0312195418814	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCTAACTGAGTGCATT	1007	False	NA	NA	False	AATAAA	-18	NA	94701989	94682801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_94684258_94685769_94685933_94686913_94687066_94688912_94689085_94701857
ENSMUST00000119661.8	chr7	+	2512	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	14.8917196323819	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTGAGAGGATAAAAACT	290	False	NA	NA	False	NA	NA	NA	4122528	4138346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
ENSMUST00000119672.8	chr13	+	3202	11	FSM	ENSMUSG00000021699.18	ENSMUST00000119672.8	2051	11	-515	-636	-515	549	multi-exon	FALSE	canonical	3	11	junction_1	6.78896162899747	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTGTTCAGAACTT	NA	False	NA	NA	False	ATTAAA	-32	NA	110039120	110088557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_110040025_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ENSMUST00000119683.2	chr7	-	411	1	FSM	ENSMUSG00000083121.4	ENSMUST00000119683.2	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATTTTTGTTTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	100804262	100803851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100803900_100804300
ENSMUST00000119685.8	chr5	+	3604	9	FSM	ENSMUSG00000041264.17	ENSMUST00000119685.8	3604	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	126.885713833355	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	False	NA	12	True	ATTAAA	-12	NA	149121476	149152240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000119694.3	chr19	+	1980	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	8.77530154238379	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTAAGTGCTTAGTC	NA	False	NA	10	True	AATAAA	-21	NA	4905157	4910946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUST00000119695.2	chr2	-	745	1	FSM	ENSMUSG00000082152.2	ENSMUST00000119695.2	745	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAAACTGTACAATCG	4092	False	NA	NA	False	NA	NA	NA	75463726	75462981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_75463000_75463700
ENSMUST00000119698.8	chr8	+	1799	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_1	286.852068800279	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTTTCTAGGCCTCTTT	NA	False	NA	26	True	AATAAA	-18	NA	70980495	70987977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUST00000119699.8	chrX	-	1750	7	FSM	ENSMUSG00000031310.17	ENSMUST00000119699.8	1750	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_6	44.6819003873182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAAAAGTGAAGGG	NA	False	NA	-29	True	NA	NA	NA	100463970	100458563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463933
ENSMUST00000119705.8	chr5	+	5372	43	FSM	ENSMUSG00000037426.19	ENSMUST00000119705.8	7929	43	-13	2570	0	0	multi-exon	FALSE	canonical	3	86	junction_1	24.5195673630974	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2013	False	NA	7	True	AATAAA	-8	NA	33021064	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUST00000119706.8	chr6	+	6739	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGGGTTTTGCTTAAC	NA	False	NA	32	True	AATAAA	-42	NA	54572095	54622824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ENSMUST00000119706.8-0	chr6	+	1852	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	81	4806	81	0	multi-exon	FALSE	canonical	1	70	junction_3	58.2353925611012	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCCTAGTTAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	54572176	54618018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ENSMUST00000119713.2	chr11	+	1722	1	FSM	ENSMUSG00000058809.9	ENSMUST00000119713.2	1722	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTAGAGTAGTGCTTTGC	8682	False	NA	NA	False	NA	NA	NA	41389563	41391285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_41389600_41391300
ENSMUST00000119718.8	chr4	+	2498	5	FSM	ENSMUSG00000078502.11	ENSMUST00000119718.8	2498	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.5111083689809	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGCTTTGGTTGTT	NA	False	NA	NA	False	NA	NA	NA	145311772	145351911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145311905_145343687_145343746_145347127_145347255_145348721_145349454_145350462
ENSMUST00000119722.8	chr9	-	3538	20	FSM	ENSMUSG00000038112.16	ENSMUST00000119722.8	4224	20	60	626	0	-626	multi-exon	TRUE	canonical	1	1	junction_2	1.49421784911351	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGTGTTGGTCTTTTGT	NA	False	NA	0	True	ATTAAA	-19	NA	39514923	39499431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_39500422_39500938_39501066_39501896_39502028_39502499_39502605_39502698_39502798_39504091_39504340_39504624_39504726_39504966_39505132_39505836_39505952_39507890_39507971_39508350_39508496_39508903_39508993_39509209_39509380_39510573_39510689_39510940_39511117_39511234_39511458_39511763_39511967_39512075_39512134_39514510_39514608_39514822
ENSMUST00000119730.8	chr15	-	3295	4	FSM	ENSMUSG00000051359.16	ENSMUST00000119730.8	3295	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.94392028877595	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCATTGTCTGGAACAT	NA	False	NA	-6	True	ATTAAA	-16	NA	37459593	37366510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37369170_37372359_37372466_37397300_37397698_37459460
ENSMUST00000119733.2	chr2	+	1308	1	FSM	ENSMUSG00000081272.2	ENSMUST00000119733.2	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTAGTTGCAGCTGGCC	NA	False	NA	NA	False	NA	NA	NA	49198166	49199474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_49198200_49199500
ENSMUST00000119736.8	chr8	+	1837	15	FSM	ENSMUSG00000031901.13	ENSMUST00000119736.8	1837	15	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_4	52.5452186216786	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTGACATAATTTTTC	NA	False	NA	33	True	AATAAA	-33	NA	106738138	106780472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ENSMUST00000119745.2	chr6	+	785	1	FSM	ENSMUSG00000082920.2	ENSMUST00000119745.2	785	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACACTAAGTTTTCTGT	7906	False	NA	NA	False	AAAAAG	-36	NA	34763613	34764398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_34763600_34764400
ENSMUST00000119746.8	chr16	+	8110	7	FSM	ENSMUSG00000068284.15	ENSMUST00000119746.8	12708	7	0	4598	0	-4596	multi-exon	FALSE	canonical	3	10	junction_6	17.7709188157381	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTCCTTCATAACA	NA	False	NA	NA	False	ATTAAA	-18	NA	43993608	44043230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44035777
ENSMUST00000119756.6	chr5	+	4760	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_12	24.8002513925928	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCGTGTTGTCTGTTTT	8516	False	NA	10	True	AATAAA	-20	NA	64387741	64508829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ENSMUST00000119767.2	chr6	+	348	1	FSM	ENSMUSG00000057696.5	ENSMUST00000119767.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAAGTTTTCCTTTAA	1214	False	NA	NA	False	NA	NA	NA	38353741	38354089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38353700_38354100
ENSMUST00000119780.2	chr6	+	471	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2027	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTATGCGTTAATAAAA	NA	False	NA	-44	True	NA	NA	NA	122433862	122434333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122433900_122434300
ENSMUST00000119783.2	chr5	-	1278	4	FSM	ENSMUSG00000007415.16	ENSMUST00000119783.2	1278	4	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	22.2910046630673	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGTTACTTTATGCAT	NA	False	NA	-8	True	NA	NA	NA	3697806	3693076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3693742_3694880_3694941_3696783_3696910_3697379
ENSMUST00000119790.2	chr2	-	793	1	FSM	ENSMUSG00000081400.2	ENSMUST00000119790.2	793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	698	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTCTCTAGGAGACATG	NA	False	NA	NA	False	NA	NA	NA	83184293	83183500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_83183500_83184300
ENSMUST00000119797.8	chr5	+	2690	9	FSM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	33.6962535009458	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGTTTTGTTTCTG	NA	False	NA	21	True	AATAAA	-43	NA	130200638	130243183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ENSMUST00000119800.8	chr15	+	3882	7	FSM	ENSMUSG00000046897.18	ENSMUST00000119800.8	3882	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.0579818161609	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	0	True	NA	25	True	AATAAA	-26	NA	102113043	102124041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102113319_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
ENSMUST00000119818.8	chr10	-	2958	12	FSM	ENSMUSG00000036099.17	ENSMUST00000119818.8	11138	12	16	8164	0	-1586	multi-exon	FALSE	canonical	3	20	junction_7	12.5467719993354	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGATGTGTGCTGGGGTTTG	3411	False	NA	0	True	AATAAA	-19	NA	93871663	93805547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ENSMUST00000119822.2	chr2	+	798	1	FSM	ENSMUSG00000081992.2	ENSMUST00000119822.2	798	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCAGATTTTTAATGG	NA	False	NA	NA	False	NA	NA	NA	34455010	34455808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34455000_34455800
ENSMUST00000119825.8	chr17	-	3769	18	FSM	ENSMUSG00000003534.18	ENSMUST00000119825.8	3769	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	10.4162502800285	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGGTGTATTTCCTGG	9047	False	NA	1	True	AATAAA	-35	NA	36011502	35992458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35997372_35997484_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
ENSMUST00000119826.7	chr8	-	4647	15	FSM	ENSMUSG00000004383.19	ENSMUST00000119826.7	4647	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	10.2152846664362	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	False	NA	-8	True	AATAAA	-17	NA	74080168	73541226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079099
ENSMUST00000119827.8	chr10	-	1253	9	FSM	ENSMUSG00000019942.14	ENSMUST00000119827.8	1253	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	961.092444825158	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTCTGTATATGTGCA	NA	False	NA	-28	True	TTTAAA	-1	NA	69188733	69174153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69187421_69187513_69188665
ENSMUST00000119830.3	chr15	+	3740	3	FSM	ENSMUSG00000046897.18	ENSMUST00000119830.3	3740	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	3.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATGTCCTCTTTGAGAA	3653	False	NA	20	True	AATAAA	-21	NA	102116696	102124036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102117312_102117589_102117709_102121030
ENSMUST00000119853.2	chr11	+	813	1	FSM	ENSMUSG00000080776.2	ENSMUST00000119853.2	813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2061	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCACCCATTGTATTTT	NA	False	NA	NA	False	GATAAA	-26	NA	46618644	46619457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_46618600_46619500
ENSMUST00000119876.2	chr6	+	378	1	FSM	ENSMUSG00000067344.8	ENSMUST00000119876.2	378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTTCAATCAGCTGTAC	891	False	NA	NA	False	NA	NA	NA	145212125	145212503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145212100_145212500
ENSMUST00000119878.8	chr16	+	5759	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTTTTAAAATGGATT	72	False	NA	20	True	AGTAAA	-22	NA	94370868	94495926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ENSMUST00000119878.8-0	chr16	+	3584	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	-325	2500	-325	366	multi-exon	FALSE	canonical	3	100	junction_3	29.752977488337	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGGCCCCATAAGGGT	NA	False	NA	12	True	AATAAA	-22	NA	94370543	94493426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ENSMUST00000119884.2	chr5	+	1194	1	FSM	ENSMUSG00000083261.5	ENSMUST00000119884.2	1194	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCAGTCACTCTTTGAC	NA	False	NA	NA	False	NA	NA	NA	39955556	39956750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_39955600_39956800
ENSMUST00000119901.9	chr17	+	1943	3	FSM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	0	-1021	0	0	multi-exon	FALSE	canonical	3	83	junction_1	538	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	1857	False	NA	24	True	NA	NA	NA	29309952	29319696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29310076_29317370_29317812_29318317
ENSMUST00000119921.8	chr4	-	2657	4	FSM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	4.98887651569859	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGGACGACTACCCTCT	1648	False	NA	-7	True	AATAAA	-17	NA	149569659	149552028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149554240_149557741_149557926_149558884_149559053_149569565
ENSMUST00000119929.8	chr7	-	2346	8	FSM	ENSMUSG00000047554.15	ENSMUST00000119929.8	2346	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	136.64029943092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAACATGCTTGTAATTC	NA	False	NA	NA	False	NA	NA	NA	109585466	109572510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168_109585232_109585416
ENSMUST00000119944.8	chr10	-	4743	13	FSM	ENSMUSG00000048661.15	ENSMUST00000119944.8	4743	13	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_12	16.3112095062125	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	-1	True	ATTAAA	-24	NA	120815237	120759317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120788122_120788161_120813688
ENSMUST00000119945.8	chr17	+	1018	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	381.394116659162	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7141	False	NA	7	True	NA	NA	NA	47679815	47689606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUST00000119946.8	chr5	-	3407	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	0	0	0	0	multi-exon	TRUE	canonical	3	301	junction_13	29.1369181623589	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCATGTAAAAATCTTGTC	NA	False	NA	-8	True	AATAAA	-24	NA	23988709	23945645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ENSMUST00000119946.8-0	chr5	-	2283	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	54	1070	54	647	multi-exon	FALSE	canonical	3	301	junction_13	29.1369181623589	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTTTTAATCAGCTTA	NA	False	NA	-10	True	AGTAAA	-18	NA	23988655	23946715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ENSMUST00000119953.2	chr16	-	1945	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	907.175424049836	2921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	954	False	NA	-3	True	ATTAAA	-25	NA	11021195	11010833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUST00000119954.9	chr7	-	5995	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAGGCTTTTTTCATG	NA	False	NA	NA	False	ATTAAA	-25	NA	92319142	92292750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ENSMUST00000119954.9-0	chr7	-	5247	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	31	717	0	0	multi-exon	FALSE	canonical	3	78	junction_15	55.0229850961295	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCCATGGAGTGTAATAT	NA	False	NA	-6	True	NA	NA	NA	92319111	92293467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ENSMUST00000119961.2	chrX	+	360	1	FSM	ENSMUSG00000082496.4	ENSMUST00000119961.2	360	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTTTCCAGTCATTGT	NA	False	NA	NA	False	NA	NA	NA	8520703	8521063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_8520700_8521100
ENSMUST00000119962.8	chr10	+	3565	24	FSM	ENSMUSG00000019823.18	ENSMUST00000119962.8	3565	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	50.7242070375094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTATGCTCTGTGCTGG	9093	False	NA	31	True	AATAAA	-20	NA	41352309	41363028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355068_41355394_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUST00000119968.8	chr3	+	1339	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACAGAAGTCTTAAAAG	NA	False	NA	16	True	AATAAA	-18	NA	87826812	87830969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000119968.8-1	chr3	+	1095	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	30	214	0	-214	multi-exon	FALSE	canonical	3	595	junction_1	165.189103756876	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	51	True	AATAAA	-29	NA	87826842	87830755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000119976.8	chr8	+	2136	9	FSM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_4	30.5366071298041	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTTTGTCTCCATGTC	NA	False	NA	18	True	NA	NA	NA	71858653	71862548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ENSMUST00000119985.2	chr5	+	859	3	FSM	ENSMUSG00000034211.15	ENSMUST00000119985.2	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	192.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTTTTGATAATGACATA	834	False	NA	-10	True	AAGAAA	-35	NA	129792640	129795511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129792828_129793790_129793931_129794979
ENSMUST00000119987.2	chrX	+	1815	1	FSM	ENSMUSG00000081137.4	ENSMUST00000119987.2	1815	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAGTACACAGGTCA	NA	False	NA	NA	False	NA	NA	NA	168151184	168152999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_168151200_168153000
ENSMUST00000119989.3-1	chr7	+	2953	2	FSM	ENSMUSG00000054715.12	ENSMUST00000119989.3	2087	2	-26	-840	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGCTTCTCCAACATC	NA	False	NA	30	True	AATAAA	-41	NA	12631767	12643010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12631871_12640160
ENSMUST00000119990.8	chr7	-	4880	19	FSM	ENSMUSG00000037552.18	ENSMUST00000119990.8	4880	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	6.29643246040129	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGCCTTTCTTG	NA	False	NA	-2	True	NA	NA	NA	28071919	28059029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28060687_28061232_28062134_28062250_28062425_28063722_28063740_28063895_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070539_28070671_28071284
ENSMUST00000120004.8	chr7	+	4612	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27388764	27405909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ENSMUST00000120004.8-0	chr7	+	4486	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	126	0	126	0	multi-exon	FALSE	canonical	2	13	junction_1	18.2362276800878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGAGTGATCTTCT	NA	False	NA	7	True	NA	NA	NA	27388890	27405909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ENSMUST00000120016.3	chr17	+	2796	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGACTGGCTTGAGTGA	NA	False	NA	16	True	AATAAA	-24	NA	27192140	27195177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27192289_27192529
ENSMUST00000120041.8	chr14	-	2164	6	FSM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	125.802384715076	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	5295	False	NA	51	True	AATAAA	-19	NA	55880708	55873421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880636
ENSMUST00000120056.8	chr16	-	1185	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	-3	1258	0	0	multi-exon	FALSE	canonical	3	167	junction_4	12.1243556529821	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTCCCAAAAGAAAAGG	4840	False	NA	-6	True	AATAAA	-18	NA	4536976	4529180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
ENSMUST00000120066.8	chr6	+	3861	5	FSM	ENSMUSG00000067825.12	ENSMUST00000120066.8	3861	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	16.7406690427832	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATTTCATCTGTTTC	NA	False	NA	NA	False	NA	NA	NA	121160847	121173144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_121161442_121162668_121162810_121164217_121164526_121167059_121167207_121170473
ENSMUST00000120068.2	chr5	-	2284	3	FSM	ENSMUSG00000044681.20	ENSMUST00000120068.2	2284	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	89.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGCCAAGTCTCTAGT	NA	False	NA	NA	False	AATAAA	-23	NA	28442871	28410457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_28412382_28414121_28414326_28442715
ENSMUST00000120074.8	chr7	-	3624	5	FSM	ENSMUSG00000048012.20	ENSMUST00000120074.8	3624	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	25.0499500997507	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAAATAAAGTGTTCGC	NA	False	NA	-40	True	GATAAA	-2	NA	44397473	44380938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44384070_44387389_44387459_44388926_44389060_44391112_44391290_44397359
ENSMUST00000120075.2	chrX	-	1386	3	FSM	ENSMUSG00000081146.2	ENSMUST00000120075.2	1386	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCACAGTCCAACACATT	NA	False	NA	NA	False	NA	NA	NA	134023733	134020709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_134021224_134022418_134023001_134023443
ENSMUST00000120076.2	chrX	-	1407	1	FSM	ENSMUSG00000083367.2	ENSMUST00000120076.2	1407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATAAAGTTGCATTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	79578757	79577350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_79577400_79578800
ENSMUST00000120087.6	chr6	-	5330	2	FSM	ENSMUSG00000047735.15	ENSMUST00000120087.6	5330	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTCTAAATTATTTC	-13	True	NA	NA	False	AATAAA	-20	NA	3399572	3372256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_3377282_3399267
ENSMUST00000120093.2	chr6	+	321	1	FSM	ENSMUSG00000071141.8	ENSMUST00000120093.2	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGTTCTCTGAGAGG	2123	False	NA	NA	False	NA	NA	NA	136465804	136466125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_136465800_136466100
ENSMUST00000120094.5	chr5	-	680	7	FSM	ENSMUSG00000047215.15	ENSMUST00000120094.5	680	7	0	0	0	0	multi-exon	FALSE	canonical	3	5084	junction_6	3284.20622914511	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCAGAAGATTTTACATG	NA	False	NA	-120	True	ATTAAA	-32	NA	65548723	65545820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ENSMUST00000120095.8	chr4	-	2549	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	54.6457683631587	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62389124	62370868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
ENSMUST00000120105.8	chr2	-	1565	7	FSM	ENSMUSG00000009555.17	ENSMUST00000120105.8	1565	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	438.056947084382	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	False	NA	NA	False	ATTAAA	-19	NA	32602279	32597455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602221
ENSMUST00000120122.8	chr9	-	5945	20	FSM	ENSMUSG00000032030.17	ENSMUST00000120122.8	5945	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	131.010434973792	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCAGTATCATGTACCTT	NA	False	NA	57	True	AGTAAA	-16	NA	53581314	53525881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53581150
ENSMUST00000120129.9	chr5	-	9959	11	FSM	ENSMUSG00000054280.15	ENSMUST00000120129.9	9959	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	39.1414102965133	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCAAGGCTATTTTGTTC	7053	False	NA	5	True	AATAAA	-26	NA	33011600	32947163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
ENSMUST00000120135.8	chr13	+	5363	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	22.2489943925403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTTTACGGATGCAGAC	NA	False	NA	NA	False	AATAAA	-22	NA	52737208	52802828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ENSMUST00000120135.8-0	chr13	+	3752	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	330	1281	0	-1271	multi-exon	FALSE	canonical	3	17	junction_6	22.2489943925403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTGCTACATTGTCA	NA	False	NA	32	True	NA	NA	NA	52737538	52801547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ENSMUST00000120143.8	chr3	-	2476	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	0	3841	0	164	multi-exon	FALSE	canonical	0	0	junction_1	1105.06589848751	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	9069783	8994493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ENSMUST00000120149.2	chr1	-	891	1	FSM	ENSMUSG00000084106.5	ENSMUST00000120149.2	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTTAACCTAATTAAACA	NA	False	NA	NA	False	NA	NA	NA	86837405	86836514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_86836500_86837400
ENSMUST00000120173.9	chr9	+	3131	6	FSM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	-3	1630	0	597	multi-exon	FALSE	canonical	2	8	junction_1	10.6695829346793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8253	False	NA	NA	False	NA	NA	NA	121946365	121997138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121946474_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ENSMUST00000120194.2	chr11	-	2619	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	0	0	0	0	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTAATTGGTTGGTT	NA	False	NA	-8	True	ATTAAA	-24	NA	113574981	113552144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUST00000120194.2-0	chr11	-	934	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	89	1596	89	-1596	multi-exon	FALSE	canonical	3	1327	junction_2	35.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATATCTAGTTTCCAT	NA	False	NA	-24	True	AATAAA	-6	NA	113574892	113553740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUST00000120201.8	chrX	-	1859	7	FSM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	20.0637871688163	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	False	NA	-1	True	NA	NA	NA	100463415	100458535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ENSMUST00000120204.8	chr4	+	5170	28	FSM	ENSMUSG00000028782.15	ENSMUST00000120204.8	5170	28	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	6.85835527200487	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	129878662	129916426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
ENSMUST00000120213.9	chr8	-	2200	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_9	146.200581394193	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTTAACTTCCAG	NA	False	NA	-3	True	AATAAA	-17	NA	91860625	91850126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
ENSMUST00000120213.9-0	chr8	-	1841	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	-30	389	0	-319	multi-exon	FALSE	canonical	3	60	junction_9	146.200581394193	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860655	91850515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
ENSMUST00000120222.8	chr17	+	2926	7	FSM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	20.6881608655772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGTTGTTTTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	22643239	22675670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432_22672560_22673404
ENSMUST00000120233.2	chrX	-	2406	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3346	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGCCAGCATGCAGC	NA	False	NA	NA	False	NA	NA	NA	103391840	103389434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_103389400_103391800
ENSMUST00000120234.2	chr4	+	636	1	FSM	ENSMUSG00000066315.10	ENSMUST00000120234.2	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	20	False	NA	NA	False	AAAAAG	-44	NA	10848419	10849055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_10848400_10849100
ENSMUST00000120272.8	chr3	+	3323	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	13.4778667659976	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTATTTTTTTCAATC	NA	False	NA	NA	False	AATAAA	-20	NA	159201069	159235592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUST00000120276.9	chr17	-	4486	13	FSM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	93.8707740578622	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATGGAACCCTTTCTA	NA	False	NA	-11	True	AATAAA	-23	NA	32503083	32423883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ENSMUST00000120281.8	chr10	-	1793	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	51.1639521538358	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5083	False	NA	-3	True	ATTAAA	-17	NA	75768309	75759055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ENSMUST00000120299.4	chr7	-	722	4	FSM	ENSMUSG00000040231.17	ENSMUST00000120299.4	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	18.0616229121921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTAAACAGCCTGT	NA	False	NA	-64	True	NA	NA	NA	45546094	45536329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45536550_45538035_45538274_45545114_45545316_45546031
ENSMUST00000120301.8	chr1	+	3937	27	FSM	ENSMUSG00000034066.14	ENSMUST00000120301.8	3937	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	3.25017068281892	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCAGGAAGTTCAATTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	93439800	93549698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93439907_93456290_93456502_93487957_93488063_93488865_93488909_93491030_93491110_93495138_93495237_93496802_93496918_93497594_93497743_93502092_93502189_93504091_93504256_93504544_93504614_93505369_93505428_93507461_93507721_93527644_93527824_93531099_93531190_93531931_93532066_93533063_93533146_93535154_93535393_93537697_93537829_93540113_93540183_93540839_93540930_93545273_93545357_93546224_93546344_93546614_93546773_93547875_93547984_93548214_93548367_93548945
ENSMUST00000120306.8	chr11	-	3972	6	FSM	ENSMUSG00000049680.18	ENSMUST00000120306.8	3972	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	21.2414688757628	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTCAAATGACAGTAGTG	NA	False	NA	10	True	NA	NA	NA	5712371	5664970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5711880
ENSMUST00000120314.8	chrX	-	1611	9	FSM	ENSMUSG00000067561.13	ENSMUST00000120314.8	1611	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	64.8072864344743	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTGCCCAGGTCTTCA	NA	False	NA	NA	False	AATAAA	-12	NA	101898222	101891244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101891758_101893920_101894051_101894237_101894302_101895177_101895315_101895635_101895695_101896016_101896169_101896311_101896486_101897739_101897930_101898030
ENSMUST00000120327.3	chr5	+	1811	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	36.4367945900843	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGTGAAGGGTTTCA	NA	False	NA	21	True	NA	NA	NA	108777874	108794537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUST00000120327.3-0	chr5	+	2580	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	-177	-592	0	0	multi-exon	FALSE	canonical	3	25	junction_1	36.4367945900843	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTTTGAACATTGAAAA	NA	False	NA	NA	False	AATAAA	-25	NA	108777697	108795129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUST00000120334.2	chr2	-	655	1	FSM	ENSMUSG00000082519.2	ENSMUST00000120334.2	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	392	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAAAAGTTACCATG	NA	False	NA	NA	False	AAGAAA	-4	NA	173889066	173888411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_173888400_173889100
ENSMUST00000120338.2	chr7	-	456	1	FSM	ENSMUSG00000081431.2	ENSMUST00000120338.2	456	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGTTGTGTGCACAAGC	NA	False	NA	NA	False	NA	NA	NA	133340663	133340207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_133340200_133340700
ENSMUST00000120339.8	chr1	-	2988	10	FSM	ENSMUSG00000041605.17	ENSMUST00000120339.8	2988	10	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_9	8.93736780097342	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGAAGGATTCTGTGTGT	NA	False	NA	-13	True	AATAAA	-20	NA	136162002	136141268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136161640
ENSMUST00000120344.8	chr10	+	1655	9	FSM	ENSMUSG00000001786.15	ENSMUST00000120344.8	1655	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	78.2747564672034	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85858052	85884187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUST00000120349.8	chr8	-	2153	10	FSM	ENSMUSG00000031667.17	ENSMUST00000120349.8	2153	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	137.062930486621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTTAACTTCCAG	NA	False	NA	-3	True	AATAAA	-17	NA	91861093	91850126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860957
ENSMUST00000120356.8	chrX	+	1520	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	64.9935381403413	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTTTCTCCAACTATCT	6308	False	NA	NA	False	AATAAA	-12	NA	20714816	20719128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ENSMUST00000120360.2	chr1	-	654	1	FSM	ENSMUSG00000084416.4	ENSMUST00000120360.2	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1435	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTCCAATAAACCTCAC	NA	False	NA	NA	False	NA	NA	NA	65033763	65033109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_65033100_65033800
ENSMUST00000120363.2	chr6	-	2043	3	FSM	ENSMUSG00000029844.10	ENSMUST00000120363.2	2043	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTATGCCTAAGCATCTT	NA	False	NA	-11	True	AATAAA	-14	NA	52135297	52132574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52134070_52134546_52134642_52134844
ENSMUST00000120364.2	chr5	+	575	3	FSM	ENSMUSG00000106943.3	ENSMUST00000120364.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	23.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTTCACTTGTTCTT	NA	False	NA	19	True	AATAAA	-21	NA	74253737	74254998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_74253801_74254018_74254081_74254548
ENSMUST00000120372.2	chr4	-	468	1	FSM	ENSMUSG00000081136.2	ENSMUST00000120372.2	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTGCAAAAGAGAAATAAAA	263	False	NA	NA	False	NA	NA	NA	135130967	135130499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135130500_135131000
ENSMUST00000120377.8	chr3	-	2021	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	22.6377811589932	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGCCCTGGCCTTTCT	NA	False	NA	-1	True	ATTAAA	-19	NA	88410614	88390511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUST00000120381.9	chr9	-	2739	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	46	3082	0	0	multi-exon	FALSE	canonical	3	1637	junction_6	106.765013773661	2419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678929	36643721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ENSMUST00000120389.8	chrX	-	2415	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	23.8094285712381	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTTTTTCTCCTTAA	NA	False	NA	-15	True	ATTAAA	-15	NA	100266155	100255564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUST00000120397.8	chr3	+	1172	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	10.4880884817015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTTTTTTCTTAA	NA	False	NA	21	True	AATAAA	-31	NA	134986981	135010187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ENSMUST00000120418.2	chr2	-	567	1	FSM	ENSMUSG00000083716.5	ENSMUST00000120418.2	567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	933	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGATCTTAACTGTTAA	NA	False	NA	NA	False	NA	NA	NA	36698404	36697837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_36697800_36698400
ENSMUST00000120428.8	chr6	+	3940	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_9	66.0549014078441	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847745	37943231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ENSMUST00000120430.2	chr8	-	1597	1	FSM	ENSMUSG00000101431.2	ENSMUST00000120430.2	1597	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACCCTGGGGTTCAG	NA	False	NA	NA	False	NA	NA	NA	76439824	76438227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_76438200_76439800
ENSMUST00000120441.8	chr7	+	3777	13	FSM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	62.5128320160482	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCTTTTATTTGGTTC	NA	False	NA	23	True	AATAAA	-25	NA	130467485	130515042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ENSMUST00000120447.8	chr1	-	2430	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	15.0738920727933	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATAAGGTGCTCATTTGT	NA	False	NA	-5	True	ATTAAA	-16	NA	164135058	164118957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
ENSMUST00000120450.2	chr16	-	1865	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	0	0	0	0	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	91443823	91430292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUST00000120450.2-0	chr16	-	1781	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	-17	101	0	-101	multi-exon	FALSE	canonical	3	1247	junction_10	242.657701299588	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGGCCCTGGTGTGTCC	NA	False	NA	1	True	ATTAAA	-17	NA	91443840	91430393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUST00000120454.3	chr7	+	742	2	FSM	ENSMUSG00000044881.8	ENSMUST00000120454.3	742	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAAGGAGTGAACTCG	7703	False	NA	-4	True	AATAAA	-5	NA	100186438	100188986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100186473_100188278
ENSMUST00000120461.9	chr18	-	1741	14	FSM	ENSMUSG00000041891.17	ENSMUST00000120461.9	1741	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	258.280362323832	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGTCTGACAACCTG	NA	False	NA	NA	False	NA	NA	NA	66135692	66115634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_66115782_66116891_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUST00000120472.2	chr18	-	3444	19	FSM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_17	8.65740245593045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCAGAGGGTAGCTGGC	NA	False	NA	1	True	AATAAA	-21	NA	61919773	61863331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910_61890006_61890722_61890807_61891670_61891800_61919646
ENSMUST00000120493.8	chr8	+	4610	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	28.9916463064027	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGTACTGCTGCTGG	NA	False	NA	NA	False	AAAAAG	-15	NA	121262595	121306219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ENSMUST00000120495.2	chr16	+	3690	2	FSM	ENSMUSG00000046516.11	ENSMUST00000120495.2	3690	2	0	0	0	0	multi-exon	FALSE	canonical	3	3811	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATATGCTGAACCG	NA	False	NA	9	True	ATTAAA	-11	NA	38167383	38173106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38167570_38169602
ENSMUST00000120498.8	chr5	+	3269	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	43.5918122329182	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952091	86984518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUST00000120512.8	chr6	+	1871	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	16.539514973407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTAGAACACTTTT	89	False	NA	NA	False	AATGAA	-36	NA	15721085	15800807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
ENSMUST00000120512.8-0	chr6	+	3232	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	0	-1361	0	0	multi-exon	FALSE	canonical	3	115	junction_1	16.539514973407	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTAAGATCTTTTTT	89	False	NA	12	True	ATTAAA	-20	NA	15721085	15802168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
ENSMUST00000120524.2	chr19	-	3895	10	FSM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	10.088497300281	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATAGCTGGTACTGCTGTG	NA	False	NA	-11	True	AATAAA	-15	NA	10847142	10835197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ENSMUST00000120537.8	chr7	-	1850	9	FSM	ENSMUSG00000053175.18	ENSMUST00000120537.8	1850	9	0	0	0	0	multi-exon	TRUE	canonical	3	615	junction_1	42.6314144733669	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5729	False	NA	-8	True	AATAAA	-17	NA	19556695	19542386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19542982_19543066_19543185_19543420_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
ENSMUST00000120539.8	chr3	-	1669	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	8.32165848854662	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTTTAAACGCTGCT	NA	False	NA	-1	True	AATAAA	-28	NA	143910981	143894290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
ENSMUST00000120544.9	chr12	+	2261	14	FSM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_12	45.9701472465536	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGTGTCTTGTGTCTGT	1071	False	NA	9	True	AATAAA	-13	NA	111738752	111761329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
ENSMUST00000120557.2	chrX	+	1210	1	FSM	ENSMUSG00000084349.4	ENSMUST00000120557.2	1210	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	511	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCAGGACCACTTTGT	NA	False	NA	NA	False	AAGAAA	-28	NA	13068809	13070019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_13068800_13070000
ENSMUST00000120564.2	chr1	+	991	4	FSM	ENSMUSG00000039323.19	ENSMUST00000120564.2	991	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1673.33041168404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGTGTGTGTCTTAC	573	False	NA	11	True	ATTAAA	-11	NA	72864480	72891626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_72864634_72888244_72888472_72888722_72888864_72891156
ENSMUST00000120573.3	chr13	-	3207	8	FSM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	0	450	0	-450	multi-exon	TRUE	canonical	3	9	junction_3	7.18558647997674	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTTAAAATGTTTATC	9776	False	NA	NA	False	AATAAA	-21	NA	76246779	76208990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76242006_76242137_76246492
ENSMUST00000120580.8	chr12	+	4069	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7507	False	NA	8	True	AATAAA	-16	NA	65083106	65110160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ENSMUST00000120580.8-0	chr12	+	2838	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	1	1230	0	0	multi-exon	FALSE	canonical	3	174	junction_3	84.525476709793	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ENSMUST00000120589.8	chr8	-	4147	19	FSM	ENSMUSG00000060212.14	ENSMUST00000120589.8	4147	19	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_9	1.76033105752832	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGTCTGTCTACTGTC	8159	False	NA	NA	False	ATTAAA	-13	NA	126566589	126478247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_126479052_126480110_126480560_126485850_126486042_126487446_126487722_126488262_126488494_126489543_126489689_126494955_126495078_126498715_126498950_126500540_126500795_126512010_126512227_126515232_126515292_126528199_126528330_126534738_126534848_126542399_126542578_126545407_126545550_126553657_126553809_126554781_126554875_126564675_126564773_126566322
ENSMUST00000120595.8	chr7	+	2255	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	24.7224719088515	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18915094	18940407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUST00000120597.2	chr4	-	404	1	FSM	ENSMUSG00000083995.2	ENSMUST00000120597.2	404	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACCCATTTCCCTTC	NA	False	NA	NA	False	AGTAAA	-32	NA	109612014	109611610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_109611600_109612000
ENSMUST00000120613.9	chr11	+	3161	18	FSM	ENSMUSG00000018395.20	ENSMUST00000120613.9	3161	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	25.820514362377	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAATAAAA	919	False	NA	NA	False	NA	NA	NA	53458205	53492794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53481543_53481553_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ENSMUST00000120658.2	chr2	-	433	1	FSM	ENSMUSG00000082345.2	ENSMUST00000120658.2	433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGTATGTGTTAATAAAA	NA	False	NA	NA	False	NA	NA	NA	69568133	69567700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_69567700_69568100
ENSMUST00000120664.8	chr13	+	4207	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	3.99382239013587	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAATATGAATAAAA	NA	False	NA	NA	False	AAGAAA	-14	NA	110039639	110089995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ENSMUST00000120689.8	chr8	+	5478	34	FSM	ENSMUSG00000031644.20	ENSMUST00000120689.8	5478	34	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_17	17.7121147315746	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAGTATATCAGTTGT	NA	False	NA	2	True	NA	NA	NA	61446228	61584373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ENSMUST00000120690.2	chr9	-	3627	6	FSM	ENSMUSG00000032328.13	ENSMUST00000120690.2	3627	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	180.204994381399	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCGTGCTGTTTATGTGTC	NA	False	NA	-9	True	AATAAA	-14	NA	79700789	79676224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79700255
ENSMUST00000120691.9	chr17	-	5249	14	FSM	ENSMUSG00000037098.19	ENSMUST00000120691.9	5249	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	17.5610515785467	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACGGAGCCGGCTTCTT	NA	False	NA	-9	True	ATTAAA	-10	NA	26288529	26208018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ENSMUST00000120697.8	chr3	+	1475	9	FSM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	249.13701049824	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89084796	89090072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUST00000120699.8	chr11	+	746	4	FSM	ENSMUSG00000020843.16	ENSMUST00000120699.8	746	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	120.856204731996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAGGTGGTATGGCAGA	NA	False	NA	-49	True	NA	NA	NA	76297777	76305155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_76297970_76300467_76300665_76301952_76302026_76304871
ENSMUST00000120705.3	chr7	-	3614	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	35.2311563108564	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGTCCAGCTCCTTC	1542	False	NA	NA	False	AGTAAA	-27	NA	126807640	126796630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ENSMUST00000120707.2	chr16	-	1414	5	FSM	ENSMUSG00000022677.16	ENSMUST00000120707.2	1414	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	160.526282894733	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	-4	True	NA	NA	NA	14135211	14117107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_14118074_14122317_14122429_14128910_14128996_14131679_14131878_14135157
ENSMUST00000120722.2	chrX	-	5842	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_6	7.21958786771044	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTGTACTCTGTAACTA	NA	False	NA	NA	False	AATAAA	-25	NA	106859940	106826356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
ENSMUST00000120722.2-0	chrX	-	1190	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	59	4593	59	493	multi-exon	FALSE	canonical	3	41	junction_6	7.21958786771044	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTTCGCATAACCCAG	NA	False	NA	NA	False	AATAAA	-22	NA	106859881	106830949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
ENSMUST00000120737.8	chr17	+	1017	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_2	314.646892034018	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTGGTTTTGTTTA	7137	False	NA	5	True	NA	NA	NA	47679811	47689604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUST00000120749.2	chrX	-	1302	1	FSM	ENSMUSG00000085711.5	ENSMUST00000120749.2	1302	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCCCTGGCTCCCACG	NA	False	NA	NA	False	AAGAAA	-28	NA	155800526	155799224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_155799200_155800500
ENSMUST00000120757.2	chr10	-	3202	15	FSM	ENSMUSG00000020226.10	ENSMUST00000120757.2	3202	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	6.8396353883009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGGATGGCCCGTTATC	NA	False	NA	NA	False	NA	NA	NA	75946795	75893327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75946635
ENSMUST00000120762.2	chrX	-	750	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	751	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	NA	False	NA	NA	False	NA	NA	NA	68649851	68649101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_68649100_68649900
ENSMUST00000120779.8	chr4	-	2006	10	FSM	ENSMUSG00000032897.18	ENSMUST00000120779.8	2006	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	134.081235740792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120672909	120614634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120672658
ENSMUST00000120784.8	chr5	-	2425	12	FSM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	10.9499235817553	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCTTGTGATTCTTTC	3630	False	NA	-4	True	AATAAA	-14	NA	121523634	121509792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121510476_121510665_121510739_121511212_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
ENSMUST00000120798.8	chr7	-	3559	5	FSM	ENSMUSG00000048012.20	ENSMUST00000120798.8	3559	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	24.8633766813762	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCGCTGTGGTTAATGT	NA	False	NA	-28	True	AATAAA	-1	NA	44397815	44380926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44384070_44387389_44387456_44388926_44389060_44391112_44391290_44397775
ENSMUST00000120826.2	chr8	+	1545	1	FSM	ENSMUSG00000071041.5	ENSMUST00000120826.2	1545	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2436	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGATCCAGTATATGCC	NA	False	NA	NA	False	NA	NA	NA	100757189	100758734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_100757200_100758700
ENSMUST00000120830.2	chr2	+	528	1	FSM	ENSMUSG00000082455.4	ENSMUST00000120830.2	528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCAACATAAAATAAATGC	NA	False	NA	NA	False	AAGAAA	-25	NA	72947091	72947619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_72947100_72947600
ENSMUST00000120831.2	chr3	+	550	1	FSM	ENSMUSG00000083538.2	ENSMUST00000120831.2	550	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGATAAGAGGAGAGATC	1865	False	NA	NA	False	AATACA	-15	NA	57435652	57436202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_57435700_57436200
ENSMUST00000120833.2	chr2	+	573	1	FSM	ENSMUSG00000083619.4	ENSMUST00000120833.2	573	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAACTCGTAGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	177152067	177152640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177152100_177152600
ENSMUST00000120834.8	chr3	+	4849	27	FSM	ENSMUSG00000027695.17	ENSMUST00000120834.8	4849	27	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	5.02258214078643	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGGTGAAATCATTTCAT	8206	False	NA	NA	False	AATAAA	-24	NA	27992843	28187388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ENSMUST00000120847.8	chr5	+	3929	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	122	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4891	False	NA	19	True	AATAAA	-30	NA	105848654	105963076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_105848952_105880095_105880241_105959589
ENSMUST00000120853.2	chr11	-	1214	1	FSM	ENSMUSG00000081208.2	ENSMUST00000120853.2	1214	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACAGTGCTCCTCTGGA	3836	False	NA	NA	False	NA	NA	NA	3100955	3099741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3099700_3101000
ENSMUST00000120859.9	chr15	-	2772	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	-70	-1310	64	0	multi-exon	FALSE	canonical	3	332	junction_10	81.5738315883225	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8083	False	NA	-4	True	AATAAA	-24	NA	79326273	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ENSMUST00000120861.8	chr13	+	2712	4	FSM	ENSMUSG00000051037.16	ENSMUST00000120861.8	2712	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGTTTATTATTATTAT	NA	False	NA	14	True	AATAAA	-19	NA	67342569	67357362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67342659_67346596_67346724_67347212_67347309_67354962
ENSMUST00000120864.10	chr7	+	1536	11	FSM	ENSMUSG00000030826.20	ENSMUST00000120864.10	1536	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	130.825991301423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGGCTATCATGCTCTAA	2475	False	NA	NA	False	AATAAA	-17	NA	45219796	45239134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234549_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ENSMUST00000120876.2	chr7	-	4069	6	FSM	ENSMUSG00000048330.15	ENSMUST00000120876.2	1633	6	11	-2447	0	-1189	multi-exon	FALSE	canonical	3	26	junction_2	14.7837748900611	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGAGGATTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	108682518	108634707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_108638091_108647157_108647301_108653571_108653666_108655950_108656024_108656989_108657217_108682369
ENSMUST00000120879.8	chr7	+	2141	7	FSM	ENSMUSG00000030990.19	ENSMUST00000120879.8	2141	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	65.7809918509054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	NA	False	NA	16	True	AATAAA	-23	NA	101859568	101887774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101859799_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUST00000120890.2	chr7	-	351	1	FSM	ENSMUSG00000083854.4	ENSMUST00000120890.2	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTGATGAATTTTAA	NA	False	NA	NA	False	AATGAA	-37	NA	103532211	103531860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_103531900_103532200
ENSMUST00000120902.8	chr5	+	5195	41	FSM	ENSMUSG00000037426.19	ENSMUST00000120902.8	5195	41	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_31	27.765085989422	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2879	False	NA	7	True	AATAAA	-8	NA	33021930	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUST00000120912.8	chr5	+	2345	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	1026.8195172413	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCGCTGTGTGGTCTATA	327	False	NA	19	True	ATTAAA	-22	NA	77099194	77115356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUST00000120925.2	chrX	+	652	1	FSM	ENSMUSG00000050900.6	ENSMUST00000120925.2	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACACCTTCTGAGTATT	NA	False	NA	NA	False	ACTAAA	-19	NA	60828986	60829638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_60829000_60829600
ENSMUST00000120928.2	chr11	+	1402	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	286.604256772296	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	14	True	AATAAA	-14	NA	117700521	117705109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
ENSMUST00000120935.2	chr7	+	2156	4	FSM	ENSMUSG00000055102.16	ENSMUST00000120935.2	2156	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.4630711207319	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTTATTTTAAATACAC	2836	False	NA	7	True	AATAAA	-15	NA	43256592	43267640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43256699_43261406_43261534_43261970_43262064_43265810
ENSMUST00000120938.2	chr15	-	390	1	FSM	ENSMUSG00000083380.2	ENSMUST00000120938.2	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	920	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGCAAGAATGACTATT	NA	False	NA	NA	False	NA	NA	NA	73681745	73681355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73681400_73681700
ENSMUST00000120942.8	chr12	-	4881	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTTTCCTTTGGGTT	NA	False	NA	NA	False	AATAAA	-16	NA	84455788	84420651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ENSMUST00000120942.8-0	chr12	-	4331	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	-15	565	0	-565	multi-exon	FALSE	canonical	2	7	junction_13	11.8983792413685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGTGTTGTTATCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	84455803	84421216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ENSMUST00000120943.8	chr17	+	1949	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	56.1921307262463	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	25105653	25111123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUST00000120952.2	chr2	-	335	1	FSM	ENSMUSG00000081056.2	ENSMUST00000120952.2	335	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTGGTGCACTCGG	NA	False	NA	NA	False	NA	NA	NA	119708884	119708549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119708500_119708900
ENSMUST00000120959.8	chr2	-	1458	4	FSM	ENSMUSG00000078881.11	ENSMUST00000120959.8	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	108.739239569818	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	176178566	176166422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_176167595_176167799_176167927_176174950_176175006_176178462
ENSMUST00000120967.8	chr17	+	2609	7	FSM	ENSMUSG00000023902.19	ENSMUST00000120967.8	2609	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	80.8484521943508	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	879	False	NA	35	True	AGTAAA	-19	NA	23819829	23829993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_23819934_23824478_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240_23828441_23828536
ENSMUST00000120977.2	chr3	-	4533	7	FSM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	83.079112229783	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGTATGTTGTACATA	NA	False	NA	NA	False	AATAAA	-24	NA	57483331	57363202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483134
ENSMUST00000120980.2	chr2	-	662	2	FSM	ENSMUSG00000081999.4	ENSMUST00000120980.2	662	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGAAGCTGGAGCCCT	NA	False	NA	NA	False	NA	NA	NA	41878841	41877484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_41878030_41878724
ENSMUST00000120990.2	chr7	+	1685	3	FSM	ENSMUSG00000051041.9	ENSMUST00000120990.2	1685	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGCCTTAAGTATCTT	NA	False	NA	NA	False	AATACA	-24	NA	107166652	107190301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_107167102_107170243_107170533_107189354
ENSMUST00000121001.2	chr5	-	555	1	FSM	ENSMUSG00000081855.5	ENSMUST00000121001.2	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATAAAATAAAGGC	NA	False	NA	NA	False	AAGAAA	-34	NA	22818180	22817625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_22817600_22818200
ENSMUST00000121004.3	chr7	+	1840	9	FSM	ENSMUSG00000030815.12	ENSMUST00000121004.3	1840	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	32.8954309137303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	24	True	AATAAA	-25	NA	127172700	127182477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUST00000121021.8	chr5	+	4777	8	FSM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	319.496925985659	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119808926	119822789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ENSMUST00000121031.2	chr4	-	2950	1	FSM	ENSMUSG00000081179.2	ENSMUST00000121031.2	2950	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTTTTGTCTTATAAT	NA	False	NA	NA	False	AAAAAG	-16	NA	147822883	147819933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147819900_147822900
ENSMUST00000121033.8	chr7	-	3971	4	FSM	ENSMUSG00000040167.17	ENSMUST00000121033.8	2231	4	-24	-1716	0	0	multi-exon	FALSE	canonical	2	3	junction_1	34.7658836600865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTTGTTTTTTTTTTA	NA	False	NA	-2	True	AATAAA	-17	NA	131012250	130990380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_130993851_130995483_130995667_130998397_130998581_131012115
ENSMUST00000121046.2	chr6	-	519	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGGATCTATCACCTG	NA	False	NA	NA	False	NA	NA	NA	99855295	99854776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_99854800_99855300
ENSMUST00000121048.2	chr3	+	1234	5	FSM	ENSMUSG00000019710.14	ENSMUST00000121048.2	1234	5	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_2	28.5744641244591	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAAGCTTTATAAAT	NA	False	NA	26	True	AATAAA	-28	NA	87828915	87830979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000121059.2	chr1	+	591	1	FSM	ENSMUSG00000064281.8	ENSMUST00000121059.2	591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCCTTGTGTCTGTAC	NA	False	NA	NA	False	AAGAAA	-4	NA	84989834	84990425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_84989800_84990400
ENSMUST00000121072.2	chr4	+	395	1	FSM	ENSMUSG00000084314.2	ENSMUST00000121072.2	395	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTAAAGCATAAATAAAAA	1836	False	NA	NA	False	AAAACA	-35	NA	150931569	150931964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_150931600_150932000
ENSMUST00000121083.8	chr6	-	3342	9	FSM	ENSMUSG00000036667.15	ENSMUST00000121083.8	3342	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	3.27633560552029	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGCTCCAAAGGATATT	NA	False	NA	NA	False	AATAAA	-36	NA	42670021	42646875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42669866
ENSMUST00000121111.9	chr4	+	3188	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	38.1110755769586	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTGTGTGGTTTGTG	NA	False	NA	1	True	NA	NA	NA	119090111	119106169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ENSMUST00000121123.8	chr7	-	3880	17	FSM	ENSMUSG00000006019.16	ENSMUST00000121123.8	3880	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.9495880954321	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTAATTGTTTTATTTA	8437	False	NA	-4	True	AAGAAA	-42	NA	15955962	15931071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_15931348_15932482_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ENSMUST00000121127.2	chr5	+	2570	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	9.62057979310787	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTCCTATTTCAGT	NA	False	NA	NA	False	AATAAA	-21	NA	93416172	93424083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ENSMUST00000121137.9	chr15	+	2285	15	FSM	ENSMUSG00000022580.14	ENSMUST00000121137.9	3360	15	0	1075	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.36578502309703	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTGAGTCGGGTACTG	NA	False	NA	NA	False	ATTAAA	-19	NA	75576128	75586259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75576324_75580019_75580136_75580837_75580967_75581085_75581162_75581862_75581941_75582303_75582429_75582514_75582682_75582836_75583031_75583402_75583560_75583639_75583748_75584105_75584301_75584850_75584928_75585067_75585215_75585298_75585461_75585900
ENSMUST00000121142.4	chr14	-	1958	7	FSM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	17.7333646616265	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGATTGCGTCCAAGT	NA	False	NA	-7	True	AATAAA	-14	NA	69944942	69934756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
ENSMUST00000121152.2	chrX	-	470	1	FSM	ENSMUSG00000081620.2	ENSMUST00000121152.2	470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	576	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATGATCA	NA	False	NA	NA	False	AATAAA	-14	NA	55493717	55493247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_55493200_55493700
ENSMUST00000121153.8	chrX	-	7439	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	53.7261575026541	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTTTTTCATCCTT	2373	False	NA	-1	True	AATAAA	-16	NA	103024890	103000768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ENSMUST00000121175.8	chr7	-	5118	30	FSM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_24	119.840530186521	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27033088	27004564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ENSMUST00000121184.2	chr7	+	2727	13	FSM	ENSMUSG00000025478.16	ENSMUST00000121184.2	2727	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.4990077958695	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	138669162	138681693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_138669515_138670074_138670260_138671777_138671943_138673521_138673584_138673676_138673758_138674309_138674379_138674772_138674894_138676083_138676241_138676582_138676725_138677737_138677909_138678385_138678566_138679655_138679822_138680817
ENSMUST00000121185.8	chr11	-	911	4	FSM	ENSMUSG00000020738.17	ENSMUST00000121185.8	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	1864.33300554261	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115426643	115413927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426604
ENSMUST00000121198.8	chr3	-	5912	21	FSM	ENSMUSG00000052539.16	ENSMUST00000121198.8	5912	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8.46404158779953	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTAGGAAGCTTGATA	NA	False	NA	NA	False	NA	NA	NA	104127419	103920940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103923385_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ENSMUST00000121200.9	chr8	-	4193	12	FSM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	23.5231554638234	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTGGCCCTCTGTGAT	NA	False	NA	-8	True	AATAAA	-17	NA	62044176	61964466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62044093
ENSMUST00000121204.8	chr9	-	1290	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_10	185.351584832717	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCTGCATTTGTGAAC	5421	False	NA	-8	True	AATAAA	-14	NA	54641803	54624447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ENSMUST00000121212.9	chr3	+	2154	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121212.9	2154	13	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	106.020045274467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072101	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ENSMUST00000121215.2	chr7	-	2564	4	FSM	ENSMUSG00000057894.11	ENSMUST00000121215.2	2564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.8878405775519	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-10	NA	12552779	12540023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12540520_12541838_12541901_12543623_12545594_12552743
ENSMUST00000121229.2	chr10	-	1194	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGCCTCTCAGCTCG	2462	False	NA	NA	False	NA	NA	NA	41931302	41930108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_41930100_41931300
ENSMUST00000121231.8	chr3	-	2121	9	FSM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.7074191137345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTTTTTTCTCAATTTT	NA	False	NA	-5	True	AATAAA	-16	NA	106454898	106410298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446913_106454738
ENSMUST00000121246.2	chr9	+	2016	3	FSM	ENSMUSG00000032103.11	ENSMUST00000121246.2	2016	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAAGAAAATACTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	35470761	35478135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_35470814_35476079_35476494_35476585
ENSMUST00000121260.2	chr2	-	447	1	FSM	ENSMUSG00000082023.4	ENSMUST00000121260.2	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCACACGGGAGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	176777595	176777148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_176777100_176777600
ENSMUST00000121270.8	chr7	+	3620	16	FSM	ENSMUSG00000035545.14	ENSMUST00000121270.8	3620	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	106.117209830556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTTTCTGCTTGGCCTG	109	False	NA	15	True	ATTAAA	-15	NA	4140064	4151171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4140155_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ENSMUST00000121285.8	chr17	-	5922	20	FSM	ENSMUSG00000024002.19	ENSMUST00000121285.8	5922	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	70.5239591122355	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503083	32415247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ENSMUST00000121287.8	chr11	-	2199	9	FSM	ENSMUSG00000020847.16	ENSMUST00000121287.8	2199	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	5.97390157267426	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGCGCAAGAGTCGTT	NA	False	NA	-10	True	AATAAA	-24	NA	75828564	75721824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75723041_75724227_75724375_75725588_75725703_75745129_75745305_75769774_75769862_75797343_75797474_75799736_75799881_75801775_75801886_75828488
ENSMUST00000121288.2	chr14	+	4231	4	FSM	ENSMUSG00000035095.12	ENSMUST00000121288.2	4231	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATCCAAATAGAGACATT	NA	False	NA	NA	False	AATAAA	-16	NA	63673842	63702947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_63674082_63679361_63679463_63689319_63690089_63699825
ENSMUST00000121291.8	chr5	+	4555	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	11.5830199691965	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	3646065	3687232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ENSMUST00000121304.2	chr10	-	1622	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_7	118.779206934547	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTCTGTGCAGTAGCA	6864	False	NA	-10	True	AATAAA	-12	NA	75757448	75732610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ENSMUST00000121309.2	chr2	+	483	1	FSM	ENSMUSG00000084383.2	ENSMUST00000121309.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	850	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACACAAAGAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	24875995	24876478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_24876000_24876500
ENSMUST00000121315.2	chr17	+	2860	4	FSM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	15.7973274814304	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTAGTCATTTATCTT	NA	False	NA	25	True	AATAAA	-25	NA	22580502	22596262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_22580689_22591016_22591070_22592623_22592751_22593768
ENSMUST00000121320.2	chr2	-	171	1	FSM	ENSMUSG00000081344.6	ENSMUST00000121320.2	171	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGACCTTGAATGGATTCGA	NA	False	NA	NA	False	NA	NA	NA	172351611	172351440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_172351400_172351600
ENSMUST00000121321.2	chr19	-	642	1	FSM	ENSMUSG00000080885.2	ENSMUST00000121321.2	642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCTTCAATAGTTCTC	NA	False	NA	NA	False	AATATA	-45	NA	37273195	37272553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_37272600_37273200
ENSMUST00000121326.8	chr3	-	3106	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	0	0	0	0	multi-exon	TRUE	canonical	3	316	junction_12	95.9239788698437	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAGTAACTTTTTAAA	NA	False	NA	0	True	ATTAAA	-38	NA	157742276	157716109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ENSMUST00000121326.8-0	chr3	-	2660	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	0	446	0	0	multi-exon	FALSE	canonical	3	316	junction_12	95.9239788698437	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157742276	157716555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ENSMUST00000121339.2	chr5	+	1764	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	23	395	0	0	multi-exon	FALSE	canonical	3	460	junction_1	221	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCAGCTTGATTTT	791	False	NA	23	True	CATAAA	-12	NA	129792597	129795544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129792614_129792747_129793931_129794979
ENSMUST00000121342.2	chr4	+	3177	1	FSM	ENSMUSG00000082195.4	ENSMUST00000121342.2	3177	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTTTTGTCTTATAAT	NA	False	NA	NA	False	AAAAAG	-16	NA	146004321	146007498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146004300_146007500
ENSMUST00000121344.8	chr16	+	4175	5	FSM	ENSMUSG00000022686.15	ENSMUST00000121344.8	4175	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	34.3829536253068	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAAATTATTGTCCCA	NA	False	NA	NA	False	NA	NA	NA	19578957	19590983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_19579228_19579390_19579578_19583857_19583965_19584250_19584372_19587493
ENSMUST00000121357.8	chr9	-	7334	20	FSM	ENSMUSG00000040111.18	ENSMUST00000121357.8	7334	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.42499907526894	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTGTGTGTGTGCTTAT	NA	False	NA	NA	False	AATAAA	-1	NA	40257586	40204528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_40209376_40210897_40211016_40211284_40211393_40211735_40211748_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40257203
ENSMUST00000121360.8	chr6	+	1188	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	0	0	0	0	multi-exon	FALSE	canonical	3	2472	junction_3	238.868666844356	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448401	40457929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUST00000121367.2	chr1	+	894	1	FSM	ENSMUSG00000082193.2	ENSMUST00000121367.2	894	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTTTCTATGAAGATT	NA	False	NA	NA	False	NA	NA	NA	14935295	14936189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_14935300_14936200
ENSMUST00000121369.8	chr5	-	4309	11	FSM	ENSMUSG00000032850.17	ENSMUST00000121369.8	4431	11	122	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	4.80520551069359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTATCTGTGAGTCAC	NA	False	NA	NA	False	AATAAA	-17	NA	118383059	118328806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375662_118380522_118380582_118380914_118381097_118383036
ENSMUST00000121377.8	chr2	-	2930	6	FSM	ENSMUSG00000039804.16	ENSMUST00000121377.8	2930	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.228129964341	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCTAATCTTTCT	3032	False	NA	-9	True	ATTAAA	-12	NA	164876737	164842279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164844092_164844558_164844880_164846008_164846217_164851242_164851370_164854755_164855083_164876602
ENSMUST00000121378.2	chr7	-	1304	11	FSM	ENSMUSG00000031027.16	ENSMUST00000121378.2	1304	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	17.7146831752645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCCCAGCACCGAGCTT	NA	False	NA	NA	False	NA	NA	NA	109038205	108878801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_109038123
ENSMUST00000121393.9	chr2	-	4402	5	FSM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	105.8828952192	617	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	175179990	175163747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415_175176471_175179925
ENSMUST00000121401.8	chr13	+	4819	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	7.33333333333333	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGACTCCAGGGCTTCT	NA	False	NA	17	True	AATAAA	-17	NA	54651591	54699103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ENSMUST00000121416.8	chr5	+	3792	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	82.9762690441658	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTTTGTTGGTTTCAT	NA	False	NA	10	True	ATTAAA	-10	NA	149121159	149152238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000121430.2	chr4	+	1128	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTGAGCAGGTGCCAG	NA	False	NA	NA	False	NA	NA	NA	103420598	103421726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_103420600_103421700
ENSMUST00000121441.2	chr2	-	1380	1	FSM	ENSMUSG00000083325.4	ENSMUST00000121441.2	1380	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTGTTAAACATTCAGT	NA	False	NA	NA	False	AATAGA	-38	NA	150342765	150341385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150341400_150342800
ENSMUST00000121442.2	chr4	-	491	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	58	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGACTTGTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	129512889	129511891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129512156_129512284_129512429_129512806
ENSMUST00000121446.2	chr10	+	3645	6	FSM	ENSMUSG00000060733.14	ENSMUST00000121446.2	1492	6	0	-2153	0	-1732	multi-exon	FALSE	canonical	3	80	junction_3	108.435049684131	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2289	False	NA	7	True	AATAAA	-21	NA	71183665	71219983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208534_71208711_71212534_71212617_71217034
ENSMUST00000121455.3	chr11	+	2255	2	FSM	ENSMUSG00000083899.3	ENSMUST00000121455.3	2255	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	1082	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGAACTATGTGTTT	NA	False	NA	NA	False	NA	NA	NA	77184269	77186724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77185700_77185899
ENSMUST00000121456.2	chr2	+	952	1	FSM	ENSMUSG00000081434.4	ENSMUST00000121456.2	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCGCCAAAGCAACCAAGT	NA	False	NA	NA	False	NA	NA	NA	152195534	152196486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152195500_152196500
ENSMUST00000121465.3	chr10	+	2251	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	83	3407	0	85	multi-exon	FALSE	canonical	3	139	junction_3	15.7418409201578	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATAATATTTTAGT	NA	False	NA	14	True	AATACA	-24	NA	13376827	13391372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ENSMUST00000121469.2	chr6	+	3924	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4.12310562561766	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTAATGTTGGGCTAAT	1275	False	NA	NA	False	AATAAA	-27	NA	71684544	71787694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
ENSMUST00000121491.8	chr4	+	2862	5	FSM	ENSMUSG00000073988.14	ENSMUST00000121491.8	2862	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	15.2212844398888	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTTTATATTTTTC	17	False	NA	21	True	AATAAA	-17	NA	20008006	20030470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_20008347_20014630_20014785_20021191_20021386_20023784_20023896_20028407
ENSMUST00000121493.9	chr8	-	5445	20	FSM	ENSMUSG00000058056.17	ENSMUST00000121493.9	5445	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	50.3924212742716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTGGCCCTCTGTGAT	NA	False	NA	-8	True	AATAAA	-17	NA	62213123	61964466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62137768_62138112_62140363_62140484_62155203_62155228_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62212844
ENSMUST00000121497.2	chr1	+	414	1	FSM	ENSMUSG00000058603.11	ENSMUST00000121497.2	414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCACACGCCCGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	127966305	127966719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_127966300_127966700
ENSMUST00000121500.2	chr2	-	807	1	FSM	ENSMUSG00000083879.5	ENSMUST00000121500.2	807	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCAAGGATTCAAGCCA	NA	False	NA	NA	False	TTTAAA	-26	NA	134605550	134604743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_134604700_134605600
ENSMUST00000121520.8	chrX	-	5564	25	FSM	ENSMUSG00000031310.17	ENSMUST00000121520.8	5564	25	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_18	23.7530334320108	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTCTCTGGGGGA	NA	False	NA	-2	True	AATAAA	-14	NA	100463520	100447989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100449410_100449510_100449626_100450810_100451066_100452082_100452198_100452759_100452912_100453217_100453387_100453662_100453767_100454818_100454966_100455137_100455313_100455450_100455564_100455743_100455901_100455983_100456082_100456717_100456884_100457094_100457268_100457509_100457661_100457780_100457868_100458027_100458144_100458353_100458505_100458793_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463303
ENSMUST00000121532.8	chr7	-	915	6	FSM	ENSMUSG00000060538.15	ENSMUST00000121532.8	915	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	16.451139778143	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTGTAAGGTACTTAC	6242	False	NA	-2	True	AATAAA	-14	NA	126497425	126485391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497395
ENSMUST00000121542.2	chr17	-	1521	8	FSM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	4.68606270481621	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGGCATTTGTGAAGGC	1864	False	NA	NA	False	GATAAA	-16	NA	25114061	25111125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ENSMUST00000121545.2	chrX	-	483	1	FSM	ENSMUSG00000083596.5	ENSMUST00000121545.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTACACAAAGAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	149998645	149998162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149998200_149998600
ENSMUST00000121555.2	chr1	+	525	1	FSM	ENSMUSG00000081382.2	ENSMUST00000121555.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTAGACACAAAGACCCAC	NA	False	NA	NA	False	NA	NA	NA	60940056	60940581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_60940100_60940600
ENSMUST00000121565.8	chrX	+	2997	3	FSM	ENSMUSG00000081044.9	ENSMUST00000121565.8	2997	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGATTCCAATTCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	93012264	93019076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_93013537_93015408_93015640_93017582
ENSMUST00000121566.8	chr4	-	3748	14	FSM	ENSMUSG00000037443.14	ENSMUST00000121566.8	3748	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	115.31464545157	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACACTCCGGTTTCCT	NA	False	NA	NA	False	AATAAA	-7	NA	133914292	133857176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881702_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ENSMUST00000121572.2	chr2	+	624	1	FSM	ENSMUSG00000084323.5	ENSMUST00000121572.2	624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCACTCGTAGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	175112348	175112972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_175112300_175113000
ENSMUST00000121573.8	chr5	-	2378	7	FSM	ENSMUSG00000015882.19	ENSMUST00000121573.8	2378	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	28.3176427141966	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGGGACTACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	46013895	45857791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46013687
ENSMUST00000121584.8	chr16	-	6194	24	FSM	ENSMUSG00000014039.19	ENSMUST00000121584.8	6194	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	11.3557360404684	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCCTCTGCTCTCC	6483	False	NA	0	True	AATAAA	-25	NA	97653050	97592719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618048_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
ENSMUST00000121585.2	chr7	+	1194	1	FSM	ENSMUSG00000083396.2	ENSMUST00000121585.2	1194	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCAGTCACTCTTTGAC	NA	False	NA	NA	False	NA	NA	NA	140470799	140471993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140470800_140472000
ENSMUST00000121618.2	chr13	+	4209	2	FSM	ENSMUSG00000045312.13	ENSMUST00000121618.2	4209	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCAAGTTTGTTGGC	9031	False	NA	9	True	ATTAAA	-18	NA	94310499	94331917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_94311147_94328355
ENSMUST00000121623.8	chr8	-	884	7	FSM	ENSMUSG00000055553.17	ENSMUST00000121623.8	884	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	10409.9140993361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTAATTGGTGTCTAG	NA	False	NA	-13	True	AATAAA	-19	NA	70975813	70960921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUST00000121646.8	chr10	+	5260	6	FSM	ENSMUSG00000019817.19	ENSMUST00000121646.8	5260	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	38.4416440855487	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3010	False	NA	18	True	AATAAA	-18	NA	12966531	13007438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_12966769_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885
ENSMUST00000121651.8	chr4	+	620	5	FSM	ENSMUSG00000042198.13	ENSMUST00000121651.8	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	167.916645988419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACATGTTTTGGGGTTT	-5	True	NA	23	True	ATTAAA	-16	NA	3938913	3943521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000121652.8	chr5	+	1875	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACCGAGTTGTTTCTT	4874	False	NA	NA	False	ATTAAA	-2	NA	123153136	123168519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123153630_123167137
ENSMUST00000121652.8-0	chr5	+	1234	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	0	641	0	325	multi-exon	FALSE	canonical	3	186	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCACTGT	4874	False	NA	NA	False	NA	NA	NA	123153136	123167878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123153630_123167137
ENSMUST00000121661.8	chr5	-	1056	5	FSM	ENSMUSG00000037822.13	ENSMUST00000121661.8	1056	5	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	163.329421721869	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGGTTTAGAATCCATT	NA	False	NA	NA	False	AATAAA	-19	NA	65650403	65607145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650283
ENSMUST00000121674.9	chr18	-	2778	10	FSM	ENSMUSG00000038425.19	ENSMUST00000121674.9	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	76.3322820564839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGCTCTCACTGTAAGTT	NA	False	NA	-15	True	AATAAA	-20	NA	70663691	70641753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUST00000121677.8	chr9	+	2810	12	FSM	ENSMUSG00000032307.17	ENSMUST00000121677.8	1680	12	0	-1130	0	0	multi-exon	FALSE	canonical	3	92	junction_2	214.811583786642	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	10	True	AATAAA	-18	NA	55056678	55114813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_55057111_55070251_55070354_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ENSMUST00000121685.8	chr10	-	1475	7	FSM	ENSMUSG00000003923.15	ENSMUST00000121685.8	899	7	0	-576	0	510	multi-exon	FALSE	canonical	1	9	junction_6	143.827056641726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCTGAAATTATGTA	NA	False	NA	-10	True	AATAAA	-18	NA	71073508	71063765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073287
ENSMUST00000121705.8	chr7	+	1316	10	FSM	ENSMUSG00000030805.15	ENSMUST00000121705.8	1316	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	22.9965107390847	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAGAAGAAGCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	127441139	127448172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
ENSMUST00000121720.2	chrX	-	2465	1	FSM	ENSMUSG00000082229.2	ENSMUST00000121720.2	2465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGTTAAATGTTTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	102230246	102227781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_102227800_102230200
ENSMUST00000121722.2	chr4	-	873	1	FSM	ENSMUSG00000082762.2	ENSMUST00000121722.2	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGTTTTTATATGAGAAAA	8313	False	NA	NA	False	NA	NA	NA	35202975	35202102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_35202100_35203000
ENSMUST00000121723.8	chr17	-	5410	32	FSM	ENSMUSG00000024163.18	ENSMUST00000121723.8	5410	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	20.8680508506648	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTCTTGAAACTTCA	NA	False	NA	-26	True	AATAAA	-13	NA	25155903	25116507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25127384_25127403_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUST00000121738.8	chr11	-	3183	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTCATTTATTTGG	NA	False	NA	NA	False	AATAAA	-10	NA	74816774	74797624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
ENSMUST00000121738.8-0	chr11	-	1180	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	245	1758	0	1184	multi-exon	FALSE	canonical	3	39	junction_7	16.4527771987291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAGAAAGTGTAAGTAA	NA	False	NA	NA	False	TTTAAA	-19	NA	74816529	74799382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
ENSMUST00000121743.2	chr7	-	2204	14	FSM	ENSMUSG00000019734.17	ENSMUST00000121743.2	2204	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	10.0954029024756	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCGTTTTGAAACCCC	6158	False	NA	-13	True	AATAAA	-15	NA	3679792	3668789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3669008_3669100_3669180_3669817_3669974_3670046_3670178_3670439_3670624_3672572_3672671_3672913_3673041_3673936_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562
ENSMUST00000121746.8	chr5	-	1568	3	FSM	ENSMUSG00000041609.17	ENSMUST00000121746.8	1568	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACCTTGTGCCTCAGTT	NA	False	NA	-6	True	AATAAA	-11	NA	115791040	115786238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115787629_115789877_115789999_115790983
ENSMUST00000121750.2	chr16	-	2614	4	FSM	ENSMUSG00000065979.13	ENSMUST00000121750.2	2614	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.2625358386483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAAATAAA	NA	False	NA	-46	True	NA	NA	NA	11727286	11621590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_11623448_11646038_11646462_11705441_11705619_11727129
ENSMUST00000121752.2	chr2	+	1428	1	FSM	ENSMUSG00000063684.10	ENSMUST00000121752.2	1428	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTCTAGAAGGAGGCGAC	8179	False	NA	NA	False	NA	NA	NA	108779150	108780578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_108779200_108780600
ENSMUST00000121755.2	chr2	-	1958	3	FSM	ENSMUSG00000083111.2	ENSMUST00000121755.2	1958	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	7.5	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGAAGCCATGTGGTAC	NA	False	NA	NA	False	NA	NA	NA	176748631	176745308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_176747091_176748242_176748304_176748516
ENSMUST00000121756.2	chr4	+	718	1	FSM	ENSMUSG00000082758.2	ENSMUST00000121756.2	718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGTTCTACCATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	145117512	145118230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145117500_145118200
ENSMUST00000121758.8	chr7	-	4552	26	FSM	ENSMUSG00000031075.20	ENSMUST00000121758.8	4552	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.88984157001901	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	144292280	144142285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144173211_144173224_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292099
ENSMUST00000121771.2	chr4	+	632	1	FSM	ENSMUSG00000081460.2	ENSMUST00000121771.2	632	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTTTGAAAGTGACCT	NA	False	NA	NA	False	AAAACA	-19	NA	146200128	146200760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146200100_146200800
ENSMUST00000121783.7	chr8	-	1945	5	FSM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	0	0	0	0	multi-exon	FALSE	canonical	3	1223	junction_2	41.2946727799119	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTCTCTTGTCT	NA	False	NA	-26	True	AGTAAA	-10	NA	23747037	23731368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
ENSMUST00000121787.8	chr17	-	5431	31	FSM	ENSMUSG00000024163.18	ENSMUST00000121787.8	5431	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	19.5379971679119	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTCTTGAAACTTCAC	NA	False	NA	-25	True	AATAAA	-14	NA	25155941	25116506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUST00000121788.2	chr6	+	438	1	FSM	ENSMUSG00000071419.8	ENSMUST00000121788.2	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	652	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAGGCCAATAAAGACTGG	NA	False	NA	-20	True	NA	NA	NA	57994490	57994928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_57994500_57994900
ENSMUST00000121791.8	chr14	-	2148	6	FSM	ENSMUSG00000002320.16	ENSMUST00000121791.8	2148	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	136.928594530142	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTTTTTACAATTAT	5192	False	NA	4	True	NA	NA	NA	55880811	55873468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880708
ENSMUST00000121799.8	chr11	+	5816	24	FSM	ENSMUSG00000049807.17	ENSMUST00000121799.8	5816	24	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	11.2785659172316	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	14	True	AATAAA	-21	NA	97306358	97393228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97306494_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ENSMUST00000121805.9	chr18	-	5479	14	FSM	ENSMUSG00000024501.21	ENSMUST00000121805.9	5479	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	2.36593176911226	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCTCCAGTCGTTTGTG	NA	False	NA	NA	False	ATTAAA	-22	NA	43571351	43454048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43570894
ENSMUST00000121808.8	chr18	-	3030	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGTTGATATTGT	NA	False	NA	-8	True	AATAAA	-39	NA	12995730	12888370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ENSMUST00000121808.8-0	chr18	-	1719	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	433	878	0	0	multi-exon	FALSE	canonical	3	56	junction_13	88.7068171466208	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGTTTGCTAATCTAA	NA	False	NA	-11	True	ATTAAA	-13	NA	12995297	12889248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ENSMUST00000121813.8	chr5	+	868	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121813.8	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	376	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTCTCTGAACTGAA	815	False	NA	39	True	AGTAAA	-34	NA	129792621	129795354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129792975_129793790_129793931_129794979
ENSMUST00000121821.2	chr5	-	636	1	FSM	ENSMUSG00000084111.5	ENSMUST00000121821.2	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGGAGAGTTGCA	NA	False	NA	NA	False	AAAAAG	-44	NA	92288788	92288152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92288200_92288800
ENSMUST00000121822.2	chr7	-	348	1	FSM	ENSMUSG00000083669.6	ENSMUST00000121822.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCCCCACTTACCTG	NA	False	NA	NA	False	NA	NA	NA	29664990	29664642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29664600_29665000
ENSMUST00000121827.2	chr2	+	2055	3	FSM	ENSMUSG00000080888.4	ENSMUST00000121827.2	2055	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	4.5	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAACATTTCTAATTCT	NA	False	NA	NA	False	NA	NA	NA	174928293	174931711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174928422_174928631_174928693_174929845
ENSMUST00000121838.2	chr8	-	1864	3	FSM	ENSMUSG00000031489.16	ENSMUST00000121838.2	1864	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	27.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAAAAAAAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	27718611	27716028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27716498_27716753_27716822_27717284
ENSMUST00000121848.2	chr7	-	572	4	FSM	ENSMUSG00000089661.10	ENSMUST00000121848.2	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	9.2736184954957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTGTCTCTTTGGTTTT	NA	False	NA	-2	True	AATACA	-16	NA	26880582	26879168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26879260_26879593_26879705_26880124_26880259_26880346
ENSMUST00000121852.2	chrX	+	702	1	FSM	ENSMUSG00000082560.2	ENSMUST00000121852.2	702	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAATTGTTCAGCACCC	NA	False	NA	NA	False	NA	NA	NA	153968674	153969376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_153968700_153969400
ENSMUST00000121853.2	chr4	+	749	1	FSM	ENSMUSG00000083496.2	ENSMUST00000121853.2	749	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTAAGAGCAACAAATA	NA	False	NA	NA	False	NA	NA	NA	79245944	79246693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_79245900_79246700
ENSMUST00000121863.5	chr5	+	3715	4	FSM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	9.8770215933527	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTTTTAGGTCTAGG	NA	False	NA	3	True	ATTAAA	-14	NA	24791747	24797482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24793299_24794094_24794660_24795306_24795490_24796066
ENSMUST00000121864.2	chr2	+	1268	1	FSM	ENSMUSG00000080989.2	ENSMUST00000121864.2	1268	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGATCTGTAGCGATCC	NA	False	NA	NA	False	AGTAAA	-43	NA	130722785	130724053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130722800_130724100
ENSMUST00000121869.8	chr16	-	5820	32	FSM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_19	19.7691147506127	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4197	False	NA	-7	True	AATAAA	-18	NA	48814528	48744594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ENSMUST00000121886.8	chr8	-	2259	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	33.7083075813663	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTATTACTTAGTACTC	NA	False	NA	-6	True	AATAAA	-23	NA	70078199	70063507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
ENSMUST00000121888.8	chr18	-	2674	15	FSM	ENSMUSG00000044252.19	ENSMUST00000121888.8	2674	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	113.316357772281	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12995480	12888384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ENSMUST00000121903.2	chr6	+	1304	6	FSM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	14.4360659460949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49344756	49366214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
ENSMUST00000121906.2	chr16	+	319	1	FSM	ENSMUSG00000081824.6	ENSMUST00000121906.2	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGGGCAGCTGGAGGCC	NA	False	NA	NA	False	AATACA	-43	NA	42775993	42776312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_42776000_42776300
ENSMUST00000121920.8	chr3	+	1115	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTAAAAGCTTTATAAAT	NA	False	NA	26	True	AATAAA	-28	NA	87826869	87830979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000121920.8-0	chr3	+	918	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	-27	224	0	-214	multi-exon	FALSE	canonical	3	127	junction_1	351.330841230883	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	51	True	AATAAA	-29	NA	87826842	87830755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUST00000121924.2	chrX	+	1257	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTAGACTGTGGTGTATT	NA	False	NA	NA	False	AAAAAG	-34	NA	12803110	12804367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_12803100_12804400
ENSMUST00000121925.8	chr16	+	2656	14	FSM	ENSMUSG00000035506.17	ENSMUST00000121925.8	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	11.5650974613248	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33337697	33483778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
ENSMUST00000121927.8	chr16	-	7868	4	FSM	ENSMUSG00000048490.15	ENSMUST00000121927.8	7868	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.1058061754523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCCTAAGATTTTTATC	NA	False	NA	NA	False	AATAAA	-20	NA	76170715	76084287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_76091904_76127633_76127753_76149359_76149435_76170657
ENSMUST00000121931.8	chr3	+	2112	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	89.4627094877463	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072146	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ENSMUST00000121942.2	chr1	+	1102	1	FSM	ENSMUSG00000081441.4	ENSMUST00000121942.2	1102	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACAGAAACGGCTAC	NA	False	NA	NA	False	NA	NA	NA	9644772	9645874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9644800_9645900
ENSMUST00000121956.8	chr2	+	1271	3	FSM	ENSMUSG00000078879.11	ENSMUST00000121956.8	1271	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	40	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTTCCCATTTCATT	NA	False	NA	NA	False	NA	NA	NA	176362314	176371667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_176362453_176370328_176370456_176370661
ENSMUST00000121959.3	chr17	-	1029	6	FSM	ENSMUSG00000073433.12	ENSMUST00000121959.3	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	34.8906864363543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTGTGTGCTGCTT	NA	False	NA	-8	True	ATTAAA	-13	NA	26420343	26418160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26418504_26418586_26418651_26418743_26418803_26418988_26419073_26419164_26419345_26420044
ENSMUST00000121979.8	chr5	+	5537	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_14	5.86433286913354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGAAGGTCTTGTAGTAA	NA	False	NA	NA	False	AATAAA	-21	NA	76736547	76794313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ENSMUST00000121979.8-0	chr5	+	3979	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	0	1558	0	0	multi-exon	FALSE	canonical	3	24	junction_14	5.86433286913354	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACTGTGAATTGCTTT	NA	False	NA	NA	False	ACTAAA	-19	NA	76736547	76792755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ENSMUST00000121984.2	chr16	-	283	1	FSM	ENSMUSG00000081404.2	ENSMUST00000121984.2	283	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGACCCTACCCTAGGT	NA	False	NA	NA	False	NA	NA	NA	31806278	31805995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31806000_31806300
ENSMUST00000121992.2	chr8	-	2452	10	FSM	ENSMUSG00000031549.17	ENSMUST00000121992.2	2452	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	2.00616334280753	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGTCTCTTCCCTTTTT	1579	False	NA	NA	False	NA	NA	NA	25066349	25022469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_25023969_25025157_25025307_25030609_25030662_25036522_25036641_25037155_25037256_25038835_25038851_25040784_25040904_25043736_25043857_25048163_25048260_25066165
ENSMUST00000121998.2	chr6	+	354	1	FSM	ENSMUSG00000068396.10	ENSMUST00000121998.2	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1026	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCACATTTTTTAAGTA	NA	False	NA	NA	False	NA	NA	NA	71101593	71101947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71101600_71101900
ENSMUST00000122014.8	chr16	+	1822	8	FSM	ENSMUSG00000022701.19	ENSMUST00000122014.8	1822	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	9.64682458064808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTGGTGGCCCACACC	NA	False	NA	NA	False	AATAAA	-15	NA	43710261	43759930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276
ENSMUST00000122026.6	chr5	+	1668	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_10	33.1264244976726	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCGTGTGTGTATGTGT	6886	False	NA	48	True	AAAAAG	-11	NA	65548839	65566550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUST00000122038.8	chr1	-	2850	14	FSM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	257.719103084491	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAACTGTCTAGGCTGATA	NA	False	NA	NA	False	AATAAA	-23	NA	60137305	60116026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137203
ENSMUST00000122044.8	chr15	-	3174	9	FSM	ENSMUSG00000022433.22	ENSMUST00000122044.8	3174	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	252.865051707428	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTGCGTTTCTTAAG	8338	False	NA	0	True	AATAAA	-15	NA	79326018	79306680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79325420
ENSMUST00000122051.2	chr4	+	2413	3	FSM	ENSMUSG00000084350.2	ENSMUST00000122051.2	2413	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	36.5	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAATGAGCCAAT	NA	False	NA	NA	False	AATAAA	-20	NA	145551806	145556512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145551837_145552678_145552806_145554256
ENSMUST00000122054.8	chr7	-	4653	18	FSM	ENSMUSG00000030849.19	ENSMUST00000122054.8	3323	18	-72	-1258	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	5.16643412059917	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	NA	False	NA	NA	False	AATAAA	-24	NA	129867993	129764180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797901_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478_129863797_129867523
ENSMUST00000122062.2	chr11	+	346	1	FSM	ENSMUSG00000081766.4	ENSMUST00000122062.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	869	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGAGGGCCCCACAGCC	NA	False	NA	NA	False	NA	NA	NA	88863482	88863828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_88863500_88863800
ENSMUST00000122063.8	chr14	+	3088	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_12	10.0195009855781	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGAGGCTAATGACTTC	NA	False	NA	13	True	AATAAA	-15	NA	57661518	57755393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ENSMUST00000122070.2	chr2	-	3117	8	FSM	ENSMUSG00000039804.16	ENSMUST00000122070.2	3117	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	35.3784207259344	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGACCTGTGCTAATCTT	3061	False	NA	-12	True	ATTAAA	-9	NA	164876708	164842282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ENSMUST00000122091.8	chr9	-	2957	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_16	368.954800838434	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	0	True	ACTAAA	-20	NA	64080386	64044425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ENSMUST00000122096.3	chr6	+	1362	1	FSM	ENSMUSG00000107906.2	ENSMUST00000122096.3	1362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCGCCATCTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	116528101	116529463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_116528100_116529500
ENSMUST00000122103.9	chr17	-	5383	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	23.7715530559927	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTTCTTTCTCCACAG	NA	False	NA	0	True	ATTAAA	-19	NA	26288519	26208009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ENSMUST00000122110.8	chr6	-	3076	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_16	54.5472424788812	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	7905	False	NA	-27	True	AATACA	-9	NA	124806398	124792000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ENSMUST00000122116.8	chr7	-	2083	17	FSM	ENSMUSG00000047767.18	ENSMUST00000122116.8	2083	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	7.54750579661917	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCCTCTTTGAAGCA	8394	False	NA	-2	True	NA	NA	NA	100951278	100938823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ENSMUST00000122127.2	chr7	-	652	2	FSM	ENSMUSG00000044709.7	ENSMUST00000122127.2	652	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGATCATAAACTCAAGG	3319	False	NA	NA	False	NA	NA	NA	19306893	19299011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19299602_19306831
ENSMUST00000122129.8	chr4	-	3249	18	FSM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_13	57.8802606030247	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150070	126125959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUST00000122143.8	chr7	+	4864	13	FSM	ENSMUSG00000038611.18	ENSMUST00000122143.8	4864	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_9	28.7289778214726	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCGCCAGCACTCCTGC	NA	False	NA	-71	True	AAGAAA	-2	NA	140823411	140842508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ENSMUST00000122154.3	chrX	-	337	3	FSM	ENSMUSG00000081443.3	ENSMUST00000122154.3	337	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	7	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTCTTTGACTGTGTG	3627	False	NA	NA	False	AATAAA	-16	NA	101730578	101729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101730044_101730198_101730354_101730542
ENSMUST00000122160.8	chr5	+	3827	10	FSM	ENSMUSG00000041264.17	ENSMUST00000122160.8	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	142.108287696738	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	False	NA	12	True	ATTAAA	-12	NA	149121472	149152240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000122162.2	chr4	-	1009	1	FSM	ENSMUSG00000100863.2	ENSMUST00000122162.2	1009	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATAAGCATGGTGTCC	NA	False	NA	NA	False	NA	NA	NA	91694792	91693783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_91693800_91694800
ENSMUST00000122164.2	chrX	+	1100	1	FSM	ENSMUSG00000083576.2	ENSMUST00000122164.2	1100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCTTCCAGCTTGTAC	NA	False	NA	NA	False	NA	NA	NA	61298653	61299753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_61298700_61299800
ENSMUST00000122180.2	chr11	-	951	1	FSM	ENSMUSG00000082087.5	ENSMUST00000122180.2	951	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGGCGAGCGGATCCC	5856	False	NA	NA	False	NA	NA	NA	40564683	40563732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_40563700_40564700
ENSMUST00000122182.2	chr15	-	1146	6	FSM	ENSMUSG00000009575.15	ENSMUST00000122182.2	1146	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	207.473757376686	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGGCCTTTGTTTTG	NA	False	NA	-10	True	NA	NA	NA	103123732	103107681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103123694
ENSMUST00000122188.10	chr8	+	2371	13	FSM	ENSMUSG00000047866.21	ENSMUST00000122188.10	2371	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	73.1522385166715	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATTCTGGTCTCCAGTG	NA	False	NA	NA	False	AATAAA	-12	NA	87350733	87443259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_87351045_87358013_87358249_87360496_87360560_87364600_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUST00000122194.8	chr12	-	2145	15	FSM	ENSMUSG00000021236.17	ENSMUST00000122194.8	2145	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	13.6099078555564	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTGTCCTCAGTATTTT	3273	False	NA	NA	False	AATAGA	-23	NA	84447708	84423450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84447603
ENSMUST00000122202.8	chr7	-	1336	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_6	627.600567417065	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895670	26886431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
ENSMUST00000122204.3	chr5	+	774	1	FSM	ENSMUSG00000033036.10	ENSMUST00000122204.3	774	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAACAACAAAAAA	NA	False	NA	NA	False	AATAAA	-36	NA	44070485	44071259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_44070500_44071300
ENSMUST00000122214.2	chr4	+	226	1	FSM	ENSMUSG00000083365.2	ENSMUST00000122214.2	226	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAATATTGTCATTCTC	NA	False	NA	NA	False	NA	NA	NA	122349002	122349228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_122349000_122349200
ENSMUST00000122226.2	chr1	+	1218	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5462	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGGCTGTCCTGCGACC	NA	False	NA	NA	False	NA	NA	NA	60743090	60744308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_60743100_60744300
ENSMUST00000122232.8	chr7	-	4286	16	FSM	ENSMUSG00000030530.16	ENSMUST00000122232.8	4286	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_15	14.0469055508876	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTCTCCAGTGTCTAT	3679	False	NA	0	True	ATTAAA	-22	NA	80052510	80038941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
ENSMUST00000122255.8	chr7	-	5115	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	5.85757838102026	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGTGTTTCTCTTCAGC	1597	False	NA	NA	False	ATTAAA	-26	NA	80338625	80236374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
ENSMUST00000122255.8-0	chr7	-	3574	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	0	1541	0	-1541	multi-exon	FALSE	canonical	0	0	junction_3	5.85757838102026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAGGCCTGGTTCATG	1597	False	NA	NA	False	NA	NA	NA	80338625	80237915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
ENSMUST00000122259.8	chr10	-	4102	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_14	78.4471744785844	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGGATGGTTGATTTTT	NA	False	NA	-2	True	AATAAA	-16	NA	60983423	60934420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ENSMUST00000122265.2	chrX	-	345	1	FSM	ENSMUSG00000085791.5	ENSMUST00000122265.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAAGTTTTCCTTTAA	NA	False	NA	NA	False	NA	NA	NA	104322587	104322242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_104322200_104322600
ENSMUST00000122290.2	chr3	+	625	5	FSM	ENSMUSG00000027673.13	ENSMUST00000122290.2	625	5	0	0	0	0	multi-exon	FALSE	canonical	3	2854	junction_2	53.4836423591363	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATTCTGTGGCTGG	NA	False	NA	23	True	AATAAA	-25	NA	32798904	32805379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUST00000122300.8	chr12	+	2268	16	FSM	ENSMUSG00000021288.20	ENSMUST00000122300.8	2268	16	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_13	39.7419453754119	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTCATAACTATTTTT	NA	False	NA	NA	False	ATTAAA	-34	NA	111725446	111773161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111761981_111762113_111772441_111772509_111772748
ENSMUST00000122303.2	chr3	-	3827	21	FSM	ENSMUSG00000052539.16	ENSMUST00000122303.2	3827	21	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.00152764812729	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGGTTACCACAGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	104127554	103923784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963924_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ENSMUST00000122305.2	chrX	+	2403	1	FSM	ENSMUSG00000082629.4	ENSMUST00000122305.2	2403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	72341198	72343601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72341200_72343600
ENSMUST00000122309.2	chr4	-	2405	4	FSM	ENSMUSG00000078495.11	ENSMUST00000122309.2	2405	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.377733676847	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGTATCTGGCAAACT	8373	False	NA	NA	False	NA	NA	NA	147860290	147838655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147840693_147842158_147842286_147845677_147845783_147860154
ENSMUST00000122312.8	chrX	+	2854	5	FSM	ENSMUSG00000001127.13	ENSMUST00000122312.8	2854	5	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_3	33.6600653594137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTCCTTCATTGTT	6296	False	NA	NA	False	AATAAA	-27	NA	20714804	20719143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ENSMUST00000122327.7	chr7	-	3521	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	109.388038905337	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGCTCATTCTTCT	NA	False	NA	-12	True	TATAAA	-12	NA	105049239	105027818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ENSMUST00000122328.8	chr12	+	6614	23	FSM	ENSMUSG00000020674.18	ENSMUST00000122328.8	6614	23	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	5.1578392554561	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGTCCTTTGTACTTT	5887	False	NA	NA	False	AATAAA	-22	NA	29988034	30067657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_29988324_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
ENSMUST00000122334.8	chr3	+	1368	12	FSM	ENSMUSG00000028013.17	ENSMUST00000122334.8	1368	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	149.418321201731	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTATATTCATAACTTC	NA	False	NA	NA	False	AATAAA	-14	NA	133015882	133083996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083610
ENSMUST00000122342.2	chr11	+	1791	4	FSM	ENSMUSG00000020834.18	ENSMUST00000122342.2	1791	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	4.08248290463863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTCTGGCTCCCGCCTC	NA	False	NA	3	True	AATAAA	-15	NA	77923177	77928690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_77923530_77924838_77924963_77925100_77925413_77927687
ENSMUST00000122358.8	chr14	-	2517	6	FSM	ENSMUSG00000002320.16	ENSMUST00000122358.8	2517	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	133.851260733696	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	4740	False	NA	51	True	AATAAA	-19	NA	55881263	55873421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880838
ENSMUST00000122384.9	chr9	-	1167	6	FSM	ENSMUSG00000032470.18	ENSMUST00000122384.9	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	190.404411713594	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCTGTTGTCTTCTTAA	3694	False	NA	21	True	GATAAA	-10	NA	99318979	99269980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318933
ENSMUST00000122404.2	chr2	+	1354	1	FSM	ENSMUSG00000082809.4	ENSMUST00000122404.2	1354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTCCTTGAGCCCCTG	NA	False	NA	NA	False	AAAAAG	-15	NA	151300875	151302229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151300900_151302200
ENSMUST00000122407.2	chr11	-	1177	3	FSM	ENSMUSG00000082831.2	ENSMUST00000122407.2	1177	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGTTATTGAAATACCAT	NA	False	NA	NA	False	NA	NA	NA	121861511	121859036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_121860026_121861143_121861205_121861384
ENSMUST00000122409.8	chr7	-	4147	8	FSM	ENSMUSG00000001802.17	ENSMUST00000122409.8	4147	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	4.69041575982343	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTGTTCCAGTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	34914923	34900302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34910923_34912564_34912613_34914280
ENSMUST00000122410.8	chr9	-	3293	12	FSM	ENSMUSG00000032386.16	ENSMUST00000122410.8	3915	12	-1	623	0	0	multi-exon	FALSE	canonical	3	24	junction_1	56.3782972135042	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGGTTGGAAGTTCTCT	NA	False	NA	-11	True	AATAAA	-28	NA	65792338	65739040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUST00000122412.2	chr18	-	2667	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	140.12890271104	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATTGTCCCTTACCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	67857665	67804281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUST00000122422.3	chr8	+	591	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1791	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCCTCGTGTCTGTAC	7117	False	NA	NA	False	AAGAAA	-4	NA	19542951	19543542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_19543000_19543500
ENSMUST00000122424.8	chr1	-	4532	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_8	37.6710681425414	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTGGTTAATCTCCC	NA	False	NA	NA	False	AATAAA	-27	NA	156546642	156506101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
ENSMUST00000122441.2	chr9	+	2081	13	FSM	ENSMUSG00000032307.17	ENSMUST00000122441.2	2081	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	238.508371038745	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTATGAAAGATACCTA	NA	False	NA	NA	False	AATAAA	-39	NA	55057366	55114092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_55057686_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ENSMUST00000122450.8	chr16	+	1298	3	FSM	ENSMUSG00000080717.11	ENSMUST00000122450.8	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	8.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACTTGAGTCCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	97798522	97811200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_97798637_97809828_97809956_97810143
ENSMUST00000122667.3	chrX	+	104	1	FSM	ENSMUSG00000119926.1	ENSMUST00000122667.3	104	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTAAAAGATGAAATTGTA	NA	False	NA	NA	False	NA	NA	NA	35627551	35627655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_35627600_35627700
ENSMUST00000122816.3	chr6	-	2415	3	FSM	ENSMUSG00000030322.13	ENSMUST00000122816.3	2415	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGCTTGTCCTATTCTG	7964	False	NA	NA	False	ATTAAA	-28	NA	115830249	115824652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115826694_115827578_115827801_115830097
ENSMUST00000122817.8	chr11	-	2662	11	FSM	ENSMUSG00000035086.14	ENSMUST00000122817.8	2662	11	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	42.6812605249658	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193086	101179087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ENSMUST00000122832.2	chr4	-	2338	10	FSM	ENSMUSG00000038598.10	ENSMUST00000122832.2	2338	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	4.47489568124495	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTAAGACCTATTGTAAG	6725	False	NA	NA	False	AATAAA	-12	NA	59111113	59081131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59082492_59084250_59084346_59085233_59085343_59086879_59086982_59092350_59092502_59093848_59093934_59094129_59094284_59099251_59099431_59109585_59109668_59111092
ENSMUST00000122859.8	chr2	-	4181	4	FSM	ENSMUSG00000068134.14	ENSMUST00000122859.8	4181	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	24.3903441732356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCCTGAGACTCTTCA	NA	False	NA	1	True	NA	NA	NA	149978598	149956325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_149960121_149961400_149961549_149961744_149961872_149978487
ENSMUST00000122865.2	chr9	+	2330	13	FSM	ENSMUSG00000034135.16	ENSMUST00000122865.2	2330	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	9.83898142876363	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGGGGAAACTGTGGG	NA	False	NA	6	True	AATAAA	-14	NA	46034534	46114183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297
ENSMUST00000122884.2	chr1	+	1865	6	FSM	ENSMUSG00000026240.13	ENSMUST00000122884.2	2578	6	0	713	0	-61	multi-exon	FALSE	canonical	3	42	junction_3	130.042147013959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTCAATATTTGTTA	NA	False	NA	32	True	AATACA	-22	NA	86514863	86533987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86526724_86526928_86528804_86528911_86532779
ENSMUST00000122893.2	chr5	-	631	4	FSM	ENSMUSG00000034826.15	ENSMUST00000122893.2	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	53.8908361618395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTTGTTTTTTTAGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	92582950	92575879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUST00000122899.8	chr17	+	2743	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	29.4089933334837	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9327	False	NA	15	True	AATAAA	-22	NA	36176947	36186488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ENSMUST00000122900.2	chr2	+	2589	3	FSM	ENSMUSG00000027176.9	ENSMUST00000122900.2	2589	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	20.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCGGTATTTCATGGTGT	6909	False	NA	NA	False	AATAAA	-22	NA	104420876	104441751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_104421048_104439215_104439318_104439435
ENSMUST00000122909.2	chr6	-	740	2	FSM	ENSMUSG00000030309.17	ENSMUST00000122909.2	740	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAGGCAAGCCACCAC	NA	False	NA	NA	False	NA	NA	NA	148797107	148795667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148795735_148796434
ENSMUST00000122912.8	chr2	+	2532	7	FSM	ENSMUSG00000044647.17	ENSMUST00000122912.8	10672	7	78	8062	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.6696419087073	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTATTTTATTTATG	5681	False	NA	13	True	AAAAAG	-12	NA	65676188	65853828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_65676229_65690874_65691037_65708308_65708397_65779302_65779474_65832646_65832907_65849783_65850081_65852314
ENSMUST00000122924.2	chr19	+	1082	3	FSM	ENSMUSG00000110949.2	ENSMUST00000122924.2	1082	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTCTGGCATCTTCCGT	3564	False	NA	7	True	ATTAAA	-16	NA	4050630	4052101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4051329_4051627_4051706_4051795
ENSMUST00000122941.8	chr15	+	4850	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	0	0	0	0	multi-exon	FALSE	canonical	1	184	junction_8	102.146464828737	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGTCTATATTATCTG	40	False	NA	NA	False	AATACA	-17	NA	12117916	12185769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUST00000122956.2	chr1	+	3688	2	FSM	ENSMUSG00000046062.6	ENSMUST00000122956.2	3688	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGTGACTTTATGTAT	5768	False	NA	15	True	AATAAA	-20	NA	133059081	133067521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_133059649_133064400
ENSMUST00000122965.8	chr2	-	3048	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCTTTCTCTTACCCTG	NA	False	NA	-4	True	AATAAA	-30	NA	105734909	105531371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ENSMUST00000122965.8-0	chr2	-	1555	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	81	1412	0	-1412	multi-exon	FALSE	canonical	3	175	junction_4	20.3548762623191	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTGCCTTAGAGTTG	NA	False	NA	NA	False	AATAAA	-21	NA	105734828	105532783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ENSMUST00000122981.2	chr6	+	676	3	FSM	ENSMUSG00000029804.18	ENSMUST00000122981.2	676	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	8	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCTTTGTATCGGACAGA	NA	False	NA	NA	False	NA	NA	NA	58808487	58820699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_58808918_58809386_58809522_58820588
ENSMUST00000122989.2	chr11	-	2083	12	FSM	ENSMUSG00000069631.15	ENSMUST00000122989.2	2083	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	62.0455710954616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGAATGGCACCAGTG	5253	False	NA	-13	True	ATTAAA	-13	NA	106092994	106054155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061981_106062091_106064078_106064201_106064504_106064608_106071780_106071810_106075387_106075446_106077926_106078007_106092836
ENSMUST00000122993.8	chr10	-	1502	9	FSM	ENSMUSG00000020232.18	ENSMUST00000122993.8	1502	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	193.736572115334	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	False	NA	-11	True	AATAAA	-17	NA	81186025	81181884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185437_81185967
ENSMUST00000122996.8	chr6	-	1485	5	FSM	ENSMUSG00000029922.16	ENSMUST00000122996.8	1485	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	1508.75983841034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGAAATGTCTTCT	NA	False	NA	1	True	AATAAA	-22	NA	39397001	39377687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
ENSMUST00000123001.2	chr11	+	733	3	FSM	ENSMUSG00000038845.12	ENSMUST00000123001.2	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	4384	junction_1	802.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGTCCTGGGAGCCTC	NA	False	NA	NA	False	NA	NA	NA	95562275	95566886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95562375_95565967_95566111_95566395
ENSMUST00000123013.2	chr15	+	681	3	FSM	ENSMUSG00000033099.11	ENSMUST00000123013.2	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGTGGTTGAGGGTGGG	NA	False	NA	NA	False	GATAAA	-38	NA	78819407	78820781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78819895_78820008_78820100_78820678
ENSMUST00000123029.8	chr19	-	735	6	FSM	ENSMUSG00000024826.16	ENSMUST00000123029.8	735	6	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	69.5775825966956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACAAGCCTGGGTTTT	1366	False	NA	NA	False	NA	NA	NA	5962805	5954174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUST00000123039.2	chr2	+	787	2	FSM	ENSMUSG00000027509.12	ENSMUST00000123039.2	787	2	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACTTTCAAGCCAGT	NA	False	NA	NA	False	NA	NA	NA	172853456	172854614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172854049_172854419
ENSMUST00000123054.8	chrX	-	1388	6	FSM	ENSMUSG00000036985.13	ENSMUST00000123054.8	1388	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	9.45304183847718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTTTTTCATTTATA	NA	False	NA	NA	False	GATAAA	-21	NA	47297542	47270570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
ENSMUST00000123082.9	chr1	-	3658	8	FSM	ENSMUSG00000060771.16	ENSMUST00000123082.9	3953	8	0	295	0	-295	multi-exon	FALSE	canonical	2	7	junction_7	8.03309481114831	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTCTTTGTGTGGACATA	NA	False	NA	-2	True	NA	NA	NA	37903917	37871778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37903806
ENSMUST00000123084.8	chr11	-	1164	4	FSM	ENSMUSG00000005204.13	ENSMUST00000123084.8	1164	4	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_2	50.2946871503895	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	NA	False	NA	-6	True	AATAAA	-16	NA	69565802	69563941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294
ENSMUST00000123087.8	chr2	+	583	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	97	junction_1	49.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCCCTGTAAATAGCACA	NA	False	NA	90	True	AATAAA	-4	NA	72809767	72819021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_72809940_72817871_72817977_72818715
ENSMUST00000123087.8-0	chr2	+	452	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	0	131	0	0	multi-exon	FALSE	canonical	1	97	junction_1	49.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGGTTCTTGGAAAATA	NA	False	NA	-41	True	AATGAA	-9	NA	72809767	72818890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_72809940_72817871_72817977_72818715
ENSMUST00000123093.2	chr6	+	2976	6	FSM	ENSMUSG00000007458.15	ENSMUST00000123093.2	2976	6	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_4	60.7466871524695	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGTTGCCTCAAGTT	2943	False	NA	11	True	ATTAAA	-18	NA	122285957	122293748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_122286126_122289192_122289373_122290217_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUST00000123104.2	chr2	+	1477	10	FSM	ENSMUSG00000027331.16	ENSMUST00000123104.2	839	10	-64	-574	0	0	multi-exon	FALSE	canonical	2	5	junction_7	167.506403046953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATTCTGACTAACAC	NA	False	NA	21	True	AATAAA	-14	NA	118644712	118665123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118661292_118661451_118662033_118662109_118664480
ENSMUST00000123109.8	chr7	-	2237	7	FSM	ENSMUSG00000038930.12	ENSMUST00000123109.8	2237	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	12.8192563486863	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	79973873	79966388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79966799_79967200_79967231_79968606_79968775_79968993_79969090_79969839_79970930_79971024_79971092_79973497
ENSMUST00000123132.2	chr17	+	506	2	FSM	ENSMUSG00000024181.10	ENSMUST00000123132.2	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTCGAGAC	NA	False	NA	NA	False	NA	NA	NA	26342696	26343908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26342824_26343529
ENSMUST00000123151.8	chr7	+	2158	3	FSM	ENSMUSG00000030795.19	ENSMUST00000123151.8	2158	3	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_2	18	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAAACCAACCC	5480	False	NA	NA	False	NA	NA	NA	127570958	127573499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127571155_127571288_127571477_127571725
ENSMUST00000123172.3	chrX	+	2487	6	FSM	ENSMUSG00000031145.16	ENSMUST00000123172.3	2487	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	4.22374241638858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTTTATTGTTTATT	NA	False	NA	92	True	AAAAAG	-26	NA	7529001	7534192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ENSMUST00000123183.8	chr5	+	854	5	FSM	ENSMUSG00000058558.13	ENSMUST00000123183.8	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	7026	junction_3	103.495168969378	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTTAGAGGCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	108048437	108051989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531
ENSMUST00000123190.8	chr7	-	2412	17	FSM	ENSMUSG00000089832.9	ENSMUST00000123190.8	2412	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	84.1649932795696	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055379	27041561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27041970_27042070_27042183_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27055052_27055295
ENSMUST00000123229.8	chr4	-	639	4	FSM	ENSMUSG00000028495.15	ENSMUST00000123229.8	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	18159	junction_1	2678.8979077225	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGATTACGAAGGCATT	NA	False	NA	NA	False	NA	NA	NA	86775591	86773988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86774251_86774382_86774594_86774964_86775097_86775557
ENSMUST00000123240.2	chr8	+	2688	3	FSM	ENSMUSG00000031807.11	ENSMUST00000123240.2	2688	3	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_1	62.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	72044854	72048309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72046836_72047312_72047415_72047704
ENSMUST00000123243.8	chr15	-	849	4	FSM	ENSMUSG00000042292.19	ENSMUST00000123243.8	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	7.40870359029762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTCACCAGAGCTCCC	NA	False	NA	NA	False	AATATA	-41	NA	81074929	80910619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_80910919_80929489_80929556_81001591_81001854_81074707
ENSMUST00000123244.8	chr10	+	927	8	FSM	ENSMUSG00000020059.10	ENSMUST00000123244.8	927	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	38.7767024521326	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88303144_88303245_88305407_88305507_88308537_88308643_88308766
ENSMUST00000123255.2	chr11	-	490	2	FSM	ENSMUSG00000053113.4	ENSMUST00000123255.2	490	2	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAAGGAGGGGCGCGGT	NA	False	NA	NA	False	NA	NA	NA	117860873	117859700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_117859929_117860611
ENSMUST00000123256.3	chr5	-	1277	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	16.4738506458581	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCCAGGGAGTCACCAA	NA	False	NA	NA	False	NA	NA	NA	114582053	114572688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ENSMUST00000123265.2	chr2	-	1572	2	FSM	ENSMUSG00000078861.9	ENSMUST00000123265.2	1572	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTCATACAGATAAAAAGA	NA	False	NA	0	True	NA	NA	NA	177720248	177710268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177711743_177720150
ENSMUST00000123273.2	chr11	-	2467	6	FSM	ENSMUSG00000025158.8	ENSMUST00000123273.2	2467	6	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	12.2081939696255	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675011	120671571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120672730_120672804_120672891_120673208_120673987_120674093_120674197_120674560_120674610_120674718
ENSMUST00000123296.8	chr7	-	639	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	0	777	0	0	multi-exon	FALSE	canonical	3	4604	junction_1	400.950978923858	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTTTCTCAATTAGT	6393	False	NA	-13	True	AATAAA	-14	NA	121701074	121690055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUST00000123355.8	chr7	+	1298	3	FSM	ENSMUSG00000036854.15	ENSMUST00000123355.8	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTGCCTTATGTCTGGG	NA	False	NA	8	True	AATAAA	-16	NA	30251948	30254864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30252153_30253686_30253810_30253893
ENSMUST00000123358.9	chr7	-	1853	9	FSM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	201.405336014218	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGCCACAAGTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	44203335	44199408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUST00000123371.8	chr11	+	4002	12	FSM	ENSMUSG00000007850.17	ENSMUST00000123371.8	4002	12	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	114.133747843021	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAATTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	50268595	50276748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUST00000123399.2	chr1	-	7775	7	FSM	ENSMUSG00000026667.15	ENSMUST00000123399.2	7775	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	39.1237353363232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTCTTATTTCTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	170042966	170020988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170027583_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
ENSMUST00000123402.2	chr6	-	1435	6	FSM	ENSMUSG00000085794.6	ENSMUST00000123402.2	1435	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.293538352357	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	8909	False	NA	-11	True	NA	NA	NA	83689183	83669787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83670449_83671333_83671456_83672566_83672939_83673961_83674051_83687715_83687808_83689084
ENSMUST00000123413.8	chr16	+	1965	12	FSM	ENSMUSG00000022884.17	ENSMUST00000123413.8	1965	12	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_11	605.093586095477	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATATTCACTTTATAT	6072	False	NA	NA	False	AATAAA	-1	NA	22926526	22932680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
ENSMUST00000123434.3	chr11	+	4200	2	FSM	ENSMUSG00000048070.5	ENSMUST00000123434.3	4200	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGTTCAGAAGTGTGTT	NA	False	NA	3	True	AATAAA	-13	NA	66802806	66820702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_66802969_66816664
ENSMUST00000123440.2	chr11	-	5120	11	FSM	ENSMUSG00000038807.20	ENSMUST00000123440.2	5120	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	6.94550214167414	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGAGTTCACATTTCTTG	NA	False	NA	-3	True	AATAAA	-18	NA	74298851	74274309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74278338_74279144_74279184_74279608_74279686_74283045_74283173_74283870_74283989_74284194_74284309_74286604_74286724_74288182_74288321_74296548_74296684_74298136_74298224_74298713
ENSMUST00000123481.2	chr4	+	4465	5	FSM	ENSMUSG00000028246.14	ENSMUST00000123481.2	4465	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.56195171219375	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCACTCTGTCTTTTAT	28	True	NA	NA	False	NA	NA	NA	21931356	21996839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21982385_21982503_21993297
ENSMUST00000123488.8	chr4	-	375	4	FSM	ENSMUSG00000050608.12	ENSMUST00000123488.8	375	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1252.05573180891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGTCTTAAATAAATTA	NA	False	NA	-52	True	NA	NA	NA	138838554	138831133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138838527
ENSMUST00000123489.2	chr11	-	745	2	FSM	ENSMUSG00000038268.5	ENSMUST00000123489.2	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACACACATAAGCCCAGA	1685	False	NA	-105	True	NA	NA	NA	75069613	75068626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_75069214_75069455
ENSMUST00000123498.8	chr12	+	2117	11	FSM	ENSMUSG00000047022.19	ENSMUST00000123498.8	2117	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	14.6659469520382	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTGGTATTTTTTAAT	NA	False	NA	NA	False	AATAAA	-31	NA	57277231	57543985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
ENSMUST00000123506.8	chr11	-	5466	17	FSM	ENSMUSG00000034354.18	ENSMUST00000123506.8	5466	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	52.2236401809564	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCCGCACGGTGGCATC	NA	False	NA	-34	True	AATAAA	-5	NA	4478406	4430889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316
ENSMUST00000123544.2	chr11	-	1291	2	FSM	ENSMUSG00000042549.11	ENSMUST00000123544.2	1291	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATGGGTATAAAATTC	NA	False	NA	NA	False	NA	NA	NA	60822693	60811742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60812732_60822391
ENSMUST00000123545.8	chr7	-	1359	7	FSM	ENSMUSG00000030590.16	ENSMUST00000123545.8	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	25.8698666405531	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855628	28851936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309
ENSMUST00000123558.8	chr11	+	4392	23	FSM	ENSMUSG00000017119.21	ENSMUST00000123558.8	4392	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_21	57.5707434020768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	978	False	NA	21	True	AATAAA	-24	NA	101443683	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
ENSMUST00000123580.8	chr1	-	2102	7	FSM	ENSMUSG00000026034.18	ENSMUST00000123580.8	2102	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	80.0867585115598	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58455924	58451158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58454817_58455615
ENSMUST00000123589.8	chr7	+	3509	4	FSM	ENSMUSG00000030386.20	ENSMUST00000123589.8	3509	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	4.98887651569859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTGTAATGTCTGAAG	NA	False	NA	NA	False	NA	NA	NA	12212231	12217828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861
ENSMUST00000123591.2	chr7	+	1674	5	FSM	ENSMUSG00000030759.17	ENSMUST00000123591.2	1674	5	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_2	33.6405633127628	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAGATACCAAGTT	NA	False	NA	NA	False	ATTAAA	-6	NA	113146665	113152350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141
ENSMUST00000123594.8	chr19	-	1728	7	FSM	ENSMUSG00000024767.12	ENSMUST00000123594.8	1728	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	430.781234761012	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGCTGTCTGGCC	NA	False	NA	-6	True	AATAAA	-18	NA	7183599	7175574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183461
ENSMUST00000123602.2	chr7	+	2506	5	FSM	ENSMUSG00000030868.7	ENSMUST00000123602.2	2506	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_4	38.4740172064213	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	14	True	AATAAA	-15	NA	121732276	121748267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ENSMUST00000123605.9	chr8	-	2039	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	0	0	0	0	multi-exon	FALSE	canonical	1	150	junction_2	108.396191699709	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	110335255	110320108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ENSMUST00000123614.8	chr12	+	3168	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	23.1948270094864	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGACCACTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	84332005	84362606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUST00000123626.8	chr15	-	2130	4	FSM	ENSMUSG00000048175.14	ENSMUST00000123626.8	1100	4	47	-1077	0	0	multi-exon	FALSE	canonical	3	84	junction_3	16.7531091641721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98043540	98032517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98043481
ENSMUST00000123646.2	chr17	+	621	5	FSM	ENSMUSG00000023967.10	ENSMUST00000123646.2	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_2	42.9905512874632	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCATGGCTGTACTGT	NA	False	NA	NA	False	NA	NA	NA	46421921	46436791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568
ENSMUST00000123657.8	chr13	+	2395	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATAGAAAATAAAACT	NA	False	NA	NA	False	NA	NA	NA	108295264	108331898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUST00000123657.8-0	chr13	+	1541	11	FSM	ENSMUSG00000021694.19	ENSMUST00000123657.8	2395	11	7	847	0	-460	multi-exon	FALSE	canonical	3	37	junction_2	15.1489273547667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTCTCCTTGAGCGCA	NA	False	NA	16	True	AATATA	-25	NA	108295271	108331051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108295405_108297168_108297265_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUST00000123680.2	chr9	+	695	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTCTAAGATTTGTT	NA	False	NA	44	True	AATAAA	-44	NA	22068141	22069654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22068210_22069027
ENSMUST00000123701.9	chr11	-	1259	7	FSM	ENSMUSG00000018565.18	ENSMUST00000123701.9	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	38.6393581727233	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTGGTAATGCTTA	9889	False	NA	-4	True	AATAAA	-26	NA	69871089	69859053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824
ENSMUST00000123773.2	chr19	+	1392	3	FSM	ENSMUSG00000024817.14	ENSMUST00000123773.2	1392	3	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	15.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	6073	False	NA	25	True	AATAAA	-15	NA	30066455	30071122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_30066744_30069440_30069540_30070117
ENSMUST00000123774.2	chr16	-	1308	8	FSM	ENSMUSG00000033809.16	ENSMUST00000123774.2	1308	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.842975705734	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429497	20424222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20429292
ENSMUST00000123809.2	chr2	-	647	4	FSM	ENSMUSG00000026761.13	ENSMUST00000123809.2	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_3	31.4572019664107	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTCCCAACTCAGGACTT	NA	False	NA	NA	False	NA	NA	NA	48839244	48826488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000123818.2	chr2	-	1082	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTGCTTATGTAAAATA	7480	False	NA	NA	False	NA	NA	NA	119448950	119440451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUST00000123818.2-0	chr2	-	1541	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	0	-459	0	0	multi-exon	FALSE	canonical	3	618	junction_4	35.3870032639103	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGAATT	7480	False	NA	NA	False	NA	NA	NA	119448950	119439992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUST00000123825.8	chr1	+	636	3	FSM	ENSMUSG00000026201.13	ENSMUST00000123825.8	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	98.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCCCTGGTTTGGCCTT	NA	False	NA	NA	False	CATAAA	-13	NA	75187517	75188878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75187669_75187883_75188059_75188568
ENSMUST00000123826.2	chr18	-	2921	3	FSM	ENSMUSG00000056153.16	ENSMUST00000123826.2	2921	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	105.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATCTTTACAGTGTGCT	NA	False	NA	NA	False	AATAGA	-35	NA	88912340	88886297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_88889043_88905336_88905458_88912285
ENSMUST00000123836.2	chrX	-	875	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGATTCAATTGGTAGC	NA	False	NA	NA	False	CATAAA	-22	NA	20828256	20817900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUST00000123836.2-0	chrX	-	588	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	26	261	0	0	multi-exon	FALSE	canonical	3	501	junction_1	60.2699943771544	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828230	20818161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUST00000123853.9	chr14	-	6656	12	FSM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	0	2708	0	-129	multi-exon	FALSE	canonical	3	18	junction_4	17.0725239604508	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTGTCTTTTTTATTT	NA	False	NA	-1	True	AATAAA	-23	NA	78774248	78732393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ENSMUST00000123879.8	chr14	-	4069	24	FSM	ENSMUSG00000021830.15	ENSMUST00000123879.8	4069	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	12.8795495935055	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45457785	45372363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455320_45455410_45455500_45456452_45456507_45456673_45457009_45457626
ENSMUST00000123924.8	chr13	+	2328	8	FSM	ENSMUSG00000021661.17	ENSMUST00000123924.8	2328	8	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_1	24.7839645327212	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	14	True	AATAAA	-24	NA	98399701	98410426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
ENSMUST00000123925.8	chr7	+	2272	8	FSM	ENSMUSG00000025485.14	ENSMUST00000123925.8	2272	8	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	21.6954805789367	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCAAGCCTCACTAGTTG	NA	False	NA	NA	False	NA	NA	NA	140437611	140442872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUST00000123927.9	chr8	-	844	4	FSM	ENSMUSG00000043687.17	ENSMUST00000123927.9	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	5.09901951359278	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCGGGTCCTGGTTTTTG	NA	False	NA	-1	True	AATAAA	-13	NA	121361231	121335340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121361006
ENSMUST00000123928.2	chr7	-	749	2	FSM	ENSMUSG00000008140.19	ENSMUST00000123928.2	749	2	0	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTTGTATAGGTATC	NA	False	NA	NA	False	NA	NA	NA	44145821	44143697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44144305_44145679
ENSMUST00000123948.8	chr2	-	3067	11	FSM	ENSMUSG00000058835.15	ENSMUST00000123948.8	3067	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	119.179906024464	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACCTTTAATCCTAT	NA	False	NA	54	True	TTTAAA	-19	NA	22930134	22830319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ENSMUST00000123952.9	chr4	+	2365	5	FSM	ENSMUSG00000078490.11	ENSMUST00000123952.9	2365	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTCTGTTGCGT	2332	False	NA	NA	False	NA	NA	NA	155493714	155506449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
ENSMUST00000123968.2	chr4	-	662	2	FSM	ENSMUSG00000028741.14	ENSMUST00000123968.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGTGGGTCCCTGCTCA	5962	False	NA	NA	False	AAAACA	-36	NA	139079621	139077185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_139077806_139079579
ENSMUST00000123976.2	chr8	+	756	4	FSM	ENSMUSG00000002345.19	ENSMUST00000123976.2	756	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	5.79271573232759	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCGAGCCTCAGCCAGC	8821	False	NA	11	True	AATAAA	-11	NA	70592356	70598185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673
ENSMUST00000123985.2	chr4	-	488	2	FSM	ENSMUSG00000028465.17	ENSMUST00000123985.2	937	2	449	0	-85	0	multi-exon	FALSE	canonical	3	68	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTTCATATTTTTAAAA	-9	True	NA	-30	True	NA	NA	NA	43562242	43559342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43559718_43562129
ENSMUST00000124008.2	chr9	+	2877	8	FSM	ENSMUSG00000034563.17	ENSMUST00000124008.2	2877	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	63.542368960098	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGAGACTGCTTTC	NA	False	NA	NA	False	NA	NA	NA	72892900	72921213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912936_72913175_72917578_72917695_72919211
ENSMUST00000124023.8	chr17	+	945	5	FSM	ENSMUSG00000023861.18	ENSMUST00000124023.8	555	5	0	-390	0	0	multi-exon	FALSE	canonical	3	18	junction_2	407.512576493045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGTGTGACTATATAT	2211	False	NA	4	True	AATAAA	-18	NA	8502683	8516493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8502794_8512246_8512328_8515366_8515464_8515655_8515789_8515969
ENSMUST00000124033.8	chrX	-	6785	14	FSM	ENSMUSG00000040363.16	ENSMUST00000124033.8	6785	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	49.0641410892762	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAGTACTTTGCATC	NA	False	NA	-6	True	AATAAA	-19	NA	11946792	11902978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914785_11915233_11915492_11921207_11921395_11922582_11925430_11926368_11926448_11927760_11927886_11946056
ENSMUST00000124052.3	chr13	+	1750	1	FSM	ENSMUSG00000021326.14	ENSMUST00000124052.3	1750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATCTGAGAAATAGCTT	956	False	NA	18	True	AATAAA	-19	NA	21364127	21365877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21364100_21365900
ENSMUST00000124054.2	chr10	-	475	4	FSM	ENSMUSG00000019942.14	ENSMUST00000124054.2	475	4	0	0	0	0	multi-exon	FALSE	canonical	3	2236	junction_1	59.4362403476756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGGCTGCATCTTAG	NA	False	NA	NA	False	NA	NA	NA	69188740	69180834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_69181015_69181904_69182062_69185925_69185989_69188665
ENSMUST00000124073.8	chr9	+	1371	8	FSM	ENSMUSG00000032076.21	ENSMUST00000124073.8	1371	8	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_7	23.8729631036229	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACACTAGAAAAATGGC	NA	False	NA	NA	False	NA	NA	NA	47441649	47730378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031
ENSMUST00000124077.8	chr11	-	3872	28	FSM	ENSMUSG00000008855.18	ENSMUST00000124077.8	3872	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_25	66.6396241448948	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAACGTGTGCCGTGTGGG	NA	False	NA	-5	True	ATTAAA	-20	NA	102120965	102086574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102104750_102104863_102109241_102109314_102115559_102115782_102120830
ENSMUST00000124084.8	chr7	-	2773	5	FSM	ENSMUSG00000041375.20	ENSMUST00000124084.8	2773	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	45.3176290200624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGACACCCACCCCACT	3622	False	NA	-14	True	AATAAA	-14	NA	16014622	16009401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16012464_16014522
ENSMUST00000124092.2	chr4	+	847	2	FSM	ENSMUSG00000023286.17	ENSMUST00000124092.2	847	2	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCTTAAAGAGAAAGCAA	9494	False	NA	NA	False	NA	NA	NA	156040461	156041940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156040906_156041537
ENSMUST00000124099.8	chr17	+	1177	10	FSM	ENSMUSG00000004864.14	ENSMUST00000124099.8	1177	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	9.38083151964686	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATGAGAAACTCAGCGT	NA	False	NA	NA	False	NA	NA	NA	28988309	28997193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050
ENSMUST00000124142.2	chr5	+	1850	2	FSM	ENSMUSG00000036599.11	ENSMUST00000124142.2	766	2	0	-1084	0	-487	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCATTCCTGTGGTT	NA	False	NA	18	True	AGTAAA	-14	NA	140491329	140510992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_140491483_140509295
ENSMUST00000124152.8	chr11	+	3644	23	FSM	ENSMUSG00000020527.15	ENSMUST00000124152.8	3644	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	38.7069942640691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGTTTTAAGTA	NA	False	NA	25	True	AATAAA	-33	NA	84771178	84801957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ENSMUST00000124187.8	chr2	+	3154	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	54.4147038951789	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGCTCCAATATGAATCC	NA	False	NA	NA	False	AATAAA	-16	NA	120439863	120452041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ENSMUST00000124200.8	chrX	+	1742	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	66.075241202738	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCTGTCTTCTGTGTA	NA	False	NA	7	True	AATAAA	-20	NA	73326355	73333754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
ENSMUST00000124220.2	chr2	-	879	2	FSM	ENSMUSG00000027472.15	ENSMUST00000124220.2	879	2	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCACATGTTTGTGGG	8689	False	NA	NA	False	NA	NA	NA	152857297	152855270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152856006_152857153
ENSMUST00000124226.3	chrX	+	7996	6	FSM	ENSMUSG00000049804.10	ENSMUST00000124226.3	7996	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.44948974278318	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGATATTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-24	NA	133587267	133597506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133587387_133587896_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133589965
ENSMUST00000124226.3-0	chrX	+	2587	6	FSM	ENSMUSG00000049804.10	ENSMUST00000124226.3	7996	6	0	5409	0	-5409	multi-exon	FALSE	canonical	2	4	junction_2	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTGTGCCTAAGGCAGA	NA	False	NA	NA	False	AATAAA	-16	NA	133587267	133592097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133587387_133587896_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133589965
ENSMUST00000124229.8	chr17	-	3201	7	FSM	ENSMUSG00000024070.16	ENSMUST00000124229.8	3201	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	48.6578188304134	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAGGAAATAAAATTA	NA	False	NA	NA	False	NA	NA	NA	79292877	79277047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643
ENSMUST00000124246.4	chr6	-	1181	2	FSM	ENSMUSG00000086429.10	ENSMUST00000124246.4	1181	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGAATGACTTTTTAAT	NA	False	NA	0	True	NA	NA	NA	113054171	113047358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113048397_113054028
ENSMUST00000124248.8	chr7	-	2667	22	FSM	ENSMUSG00000019254.17	ENSMUST00000124248.8	2667	22	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	53.3921869151542	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	8480	False	NA	-3	True	AATAAA	-17	NA	4504360	4484518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ENSMUST00000124256.8-1	chr4	+	3237	4	FSM	ENSMUSG00000049119.15	ENSMUST00000124256.8	618	4	100	-2719	0	0	multi-exon	FALSE	canonical	3	14	junction_1	25.9272486435067	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTGATTTCTTTGTC	17	True	NA	12	True	AATAAA	-21	NA	5644189	5801101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_5644411_5678902_5678999_5729570_5729658_5798268
ENSMUST00000124266.8	chr7	-	2568	10	FSM	ENSMUSG00000019082.19	ENSMUST00000124266.8	2568	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	41.7904827017402	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTTGCTTTAAGAGTC	461	False	NA	-22	True	AATAAA	-15	NA	141017551	141009664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012072_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ENSMUST00000124308.8	chr15	-	5106	8	FSM	ENSMUSG00000036046.15	ENSMUST00000124308.8	5106	8	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_3	16.5701969985703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGCCTCAGTTTGCC	9997	False	NA	-12	True	ATTAAA	-17	NA	84845184	84832200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_84833480_84833751_84833911_84834812_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670
ENSMUST00000124314.3	chr7	-	1073	5	FSM	ENSMUSG00000025499.19	ENSMUST00000124314.3	1073	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	269.37183872855	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	328	False	NA	-3	True	AGTAAA	-17	NA	140772853	140770839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742
ENSMUST00000124315.8	chr2	-	1196	5	FSM	ENSMUSG00000089917.8	ENSMUST00000124315.8	1196	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	15.1224171348366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATCCTGATGGACTGC	NA	False	NA	NA	False	NA	NA	NA	181213168	181211556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292
ENSMUST00000124330.2	chr5	+	947	2	FSM	ENSMUSG00000029614.14	ENSMUST00000124330.2	947	2	0	0	0	0	multi-exon	FALSE	canonical	3	17353	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCCACCCAGGGCTACA	NA	False	NA	NA	False	NA	NA	NA	121343471	121344508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121343727_121343816
ENSMUST00000124331.8	chr2	-	4314	5	FSM	ENSMUSG00000051396.16	ENSMUST00000124331.8	4314	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	532.771702983557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGGTTTGTCTACTTC	3999	False	NA	NA	False	AATAAA	-19	NA	3513794	3505563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_3508787_3509329_3510133_3512051_3512135_3512210_3512292_3513670
ENSMUST00000124334.8	chr19	-	2067	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_15	11.5573930163049	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGGTCCTTCTGAAAT	NA	False	NA	2	True	AATAAA	-39	NA	5538430	5532859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ENSMUST00000124381.8	chrX	+	715	6	FSM	ENSMUSG00000025271.14	ENSMUST00000124381.8	715	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_5	33.3202641045956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGATGTCCATAAGTAT	NA	False	NA	NA	False	NA	NA	NA	149371251	149395928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_149371339_149371940_149372041_149372791_149373081_149391581_149391708_149394001_149394096_149395909
ENSMUST00000124403.2	chr2	+	1049	4	FSM	ENSMUSG00000068205.15	ENSMUST00000124403.2	1049	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.6495285928003	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGATTCCTGTTTATGCT	NA	False	NA	NA	False	AATAAA	-17	NA	140237379	140262415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_140237623_140242781_140242899_140260736_140260835_140261824
ENSMUST00000124407.8	chr11	-	1142	6	FSM	ENSMUSG00000020743.16	ENSMUST00000124407.8	1142	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.038373403655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503713	115498743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115499440_115499886_115499923_115500196_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUST00000124443.8	chr2	+	1630	11	FSM	ENSMUSG00000038696.15	ENSMUST00000124443.8	1630	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	60.6699266523374	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAACAAAGAAAACTGA	NA	False	NA	NA	False	NA	NA	NA	34296873	34513487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34297267_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUST00000124443.8-0	chr2	+	3105	11	FSM	ENSMUSG00000038696.15	ENSMUST00000124443.8	1630	11	0	-1475	0	0	multi-exon	FALSE	canonical	3	20	junction_1	60.6699266523374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296873	34514962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34297267_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUST00000124454.2	chr16	-	764	6	FSM	ENSMUSG00000005846.13	ENSMUST00000124454.2	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1127.73284070297	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGCAGAGTGTGT	1021	False	NA	NA	False	NA	NA	NA	11021128	11014307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUST00000124458.8	chrX	-	3506	9	FSM	ENSMUSG00000037475.16	ENSMUST00000124458.8	3506	9	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_7	57.0723225390381	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTATATTGTTACTT	NA	False	NA	1	True	AATAAA	-26	NA	40903123	40883867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074
ENSMUST00000124466.8	chr4	-	4975	35	FSM	ENSMUSG00000028556.16	ENSMUST00000124466.8	4975	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	38.355963431986	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAATGAGTGGGATTT	NA	False	NA	-6	True	ATTAAA	-19	NA	98911627	98825093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98834992_98842102_98842118_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861341_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578
ENSMUST00000124475.2	chr11	+	416	2	FSM	ENSMUSG00000020527.15	ENSMUST00000124475.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCTTATAGCCCTCCT	NA	False	NA	NA	False	NA	NA	NA	84771135	84771829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_84771338_84771615
ENSMUST00000124482.3	chr7	-	726	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	100	6474	0	0	multi-exon	FALSE	canonical	3	2255	junction_2	27.5	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGACTTTCTTGTCCT	NA	False	NA	-28	True	GATAAA	-20	NA	105460206	105458886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105459352_105459656_105459726_105460014
ENSMUST00000124487.8	chr9	+	536	4	FSM	ENSMUSG00000037286.16	ENSMUST00000124487.8	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	152.993100788529	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCTCCAGGAGAAAAG	NA	False	NA	NA	False	AAGAAA	-5	NA	100479850	100620049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030
ENSMUST00000124488.7	chr2	-	2641	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	0	1147	0	-1147	multi-exon	FALSE	canonical	3	23	junction_8	5.37028863283902	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTACTCTTTTTGTTAA	9029	False	NA	NA	False	ATTAAA	-21	NA	13549479	13514971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ENSMUST00000124505.8	chr12	+	4962	22	FSM	ENSMUSG00000020654.16	ENSMUST00000124505.8	4962	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	15.5787808476277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183103	4263525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4183720_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ENSMUST00000124518.2	chr2	-	2383	13	FSM	ENSMUSG00000027641.14	ENSMUST00000124518.2	2383	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	21.3559450478992	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGACTTGTATACATGT	NA	False	NA	-6	True	NA	NA	NA	157046446	157016905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ENSMUST00000124520.8	chr8	+	1935	8	FSM	ENSMUSG00000046295.14	ENSMUST00000124520.8	1935	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_7	7.9256751466744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGAGGACAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	71858665	71862120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ENSMUST00000124533.3	chr7	+	1792	10	FSM	ENSMUSG00000030802.15	ENSMUST00000124533.3	1792	10	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	37.2562033943077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGCCCCAAATGTTG	NA	False	NA	28	True	ATTAAA	-20	NA	127503933	127507780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092
ENSMUST00000124536.2	chr10	-	1767	10	FSM	ENSMUSG00000013858.15	ENSMUST00000124536.2	1767	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	17.0257611638915	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGAGAGGGGCTGGTGG	NA	False	NA	NA	False	NA	NA	NA	79819874	79813191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ENSMUST00000124538.2	chrX	+	690	1	FSM	ENSMUSG00000084842.4	ENSMUST00000124538.2	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCCCAGGACCCAGCC	6458	False	NA	NA	False	NA	NA	NA	102057303	102057993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_102057300_102058000
ENSMUST00000124549.9	chr14	-	907	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	83	1324	0	0	multi-exon	FALSE	canonical	3	244	junction_3	15.9661099415815	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGAGCATCCTCTTCC	NA	False	NA	-10	True	AATAAA	-17	NA	21898962	21897246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUST00000124557.3	chr17	-	1569	9	FSM	ENSMUSG00000024118.15	ENSMUST00000124557.3	1569	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	69.7603038984206	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTGGTTTCTTGTTTC	3512	False	NA	-7	True	TTTAAA	-28	NA	24439589	24434519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439495
ENSMUST00000124563.8	chr7	+	891	4	FSM	ENSMUSG00000006024.14	ENSMUST00000124563.8	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	1229	junction_2	49.3153120237518	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCACATCTCCATCGCTG	NA	False	NA	NA	False	NA	NA	NA	15832556	15847059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508
ENSMUST00000124565.3	chr9	-	711	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTGTTTTTTTTTTT	NA	False	NA	1	True	AATAAA	-29	NA	72892658	72887003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_72887479_72892422
ENSMUST00000124576.8	chr15	-	6113	40	FSM	ENSMUSG00000036529.18	ENSMUST00000124576.8	6113	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	110.137717866217	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAATTGTACGCCTGCAT	NA	False	NA	-18	True	TATAAA	-14	NA	89199474	89172488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89172946_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189672_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ENSMUST00000124577.8	chrX	-	2055	7	FSM	ENSMUSG00000045010.15	ENSMUST00000124577.8	1190	7	-1160	295	0	0	multi-exon	FALSE	canonical	3	11	junction_2	111.484926734016	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838029	100833953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100834130_100834212_100834255_100834440_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ENSMUST00000124593.2	chr9	-	939	3	FSM	ENSMUSG00000032306.15	ENSMUST00000124593.2	939	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	44	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCACAGAGCTATAGCT	8998	False	NA	NA	False	NA	NA	NA	57459999	57457258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57458057_57459429_57459558_57459986
ENSMUST00000124599.2	chr2	-	548	2	FSM	ENSMUSG00000027551.16	ENSMUST00000124599.2	548	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAGGGTCAAACATGG	NA	False	NA	NA	False	NA	NA	NA	168754553	168748761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168748910_168754153
ENSMUST00000124610.6	chr5	-	2306	10	FSM	ENSMUSG00000039753.17	ENSMUST00000124610.6	2306	10	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_2	33.8234340562579	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTAAAATGACAAGTTGT	8876	False	NA	NA	False	TTTAAA	-2	NA	43939444	43907947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUST00000124621.2	chr15	+	513	3	FSM	ENSMUSG00000022201.17	ENSMUST00000124621.2	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	305.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTCCTAGCTGTAA	75	False	NA	NA	False	ACTAAA	-25	NA	12117951	12122423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_12118034_12118324_12118425_12122092
ENSMUST00000124638.8	chr3	-	5652	21	FSM	ENSMUSG00000015697.15	ENSMUST00000124638.8	5652	21	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	48.5557411641507	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTCTGAAATGGTC	1689	False	NA	-4	True	ATTAAA	-15	NA	95264466	95230835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95246344_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ENSMUST00000124641.2	chr5	-	294	1	FSM	ENSMUSG00000072692.8	ENSMUST00000124641.2	294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTCAATCAGTCATAAA	NA	False	NA	-52	True	NA	NA	NA	115241580	115241286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115241300_115241600
ENSMUST00000124665.3	chr6	+	2665	13	FSM	ENSMUSG00000051855.16	ENSMUST00000124665.3	2665	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	120.876888701779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCGGCTTCCCCTCCCCC	0	True	NA	16	True	AATAAA	-22	NA	30738051	30748464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30738335_30740238_30740343_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUST00000124699.2	chr11	-	516	2	FSM	ENSMUSG00000020390.13	ENSMUST00000124699.2	516	2	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGTGTGTTGCAGTGT	NA	False	NA	NA	False	NA	NA	NA	51891306	51888396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51888726_51891119
ENSMUST00000124745.8	chr8	+	1933	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	0	0	0	0	multi-exon	FALSE	canonical	2	515	junction_4	131.476946648452	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	False	NA	13	True	NA	NA	NA	71921842	71928742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ENSMUST00000124764.8	chr8	+	1419	7	FSM	ENSMUSG00000031570.18	ENSMUST00000124764.8	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	20.3141986469235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	17	True	AATAAA	-29	NA	26210087	26214914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26210179_26210293_26210363_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUST00000124778.8	chr11	-	907	3	FSM	ENSMUSG00000020736.13	ENSMUST00000124778.8	907	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	15.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGGGGATCATTGAGAG	NA	False	NA	NA	False	NA	NA	NA	115382677	115381463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115382025_115382096_115382198_115382432
ENSMUST00000124779.8	chr6	+	1122	3	FSM	ENSMUSG00000004264.18	ENSMUST00000124779.8	1122	3	0	0	0	0	multi-exon	FALSE	canonical	3	2675	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCTAGGCTGTACAGTAA	NA	False	NA	NA	False	NA	NA	NA	124689298	124690833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124689527_124689666_124689752_124690024
ENSMUST00000124783.8	chr3	-	354	3	FSM	ENSMUSG00000028042.16	ENSMUST00000124783.8	354	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCATCTGTGCGACCTC	NA	False	NA	NA	False	NA	NA	NA	89300942	89288728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89288823_89300341_89300443_89300783
ENSMUST00000124788.2	chr2	+	1079	3	FSM	ENSMUSG00000083674.4	ENSMUST00000124788.2	1079	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAAGTGTACGTTTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	144301199	144309714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144301321_144306398_144306495_144308852
ENSMUST00000124790.8	chr8	-	945	3	FSM	ENSMUSG00000079042.11	ENSMUST00000124790.8	945	3	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	5	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATGAGTTTATTGTG	NA	False	NA	-24	True	ATTAAA	-18	NA	65489824	65481071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_65481644_65488316_65488407_65489541
ENSMUST00000124830.3	chr13	+	9592	24	FSM	ENSMUSG00000054889.11	ENSMUST00000124830.3	9592	24	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	5.11863048791702	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGTGTTTTGATTTCT	6496	False	NA	35	True	AATAAA	-17	NA	38335269	38382553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_38335771_38348739_38348843_38351491_38351641_38352581_38352757_38356754_38356884_38357793_38357845_38359043_38359206_38360371_38360477_38361162_38361259_38362409_38362536_38363023_38363177_38365073_38365229_38366177_38366305_38367090_38367293_38367921_38368149_38369071_38369239_38369548_38369688_38370570_38370765_38371716_38371880_38372425_38372510_38373521_38373630_38374370_38374470_38375336_38377632_38378671
ENSMUST00000124834.8	chr2	+	1772	6	FSM	ENSMUSG00000027357.17	ENSMUST00000124834.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	279.759611094954	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	1644	False	NA	13	True	AATAAA	-28	NA	132688607	132708705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_132689046_132691785_132691924_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ENSMUST00000124838.2	chr10	-	1525	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_3	35.482102415679	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	7489	False	NA	-10	True	AATAAA	-8	NA	7656655	7643719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUST00000124843.2	chr2	-	678	3	FSM	ENSMUSG00000036281.14	ENSMUST00000124843.2	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCCCGTTCTAGATGGT	NA	False	NA	NA	False	NA	NA	NA	26270665	26267649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26268080_26268505_26268649_26270560
ENSMUST00000124869.8	chr11	-	2259	4	FSM	ENSMUSG00000020925.17	ENSMUST00000124869.8	407	4	-198	-1654	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	267.304237818175	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTCTGTCTTGTTCTTT	NA	False	NA	-4	True	AATAAA	-16	NA	102588560	102575511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102577323_102581026_102581163_102582936_102583025_102588336
ENSMUST00000124899.8	chr7	-	4928	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	20.3273215156351	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-32	NA	66339344	66294312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ENSMUST00000124932.2	chr11	+	404	2	FSM	ENSMUSG00000059278.10	ENSMUST00000124932.2	404	2	0	0	0	0	multi-exon	FALSE	canonical	3	1280	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286943	69287506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69287187_69287345
ENSMUST00000124937.2	chr7	-	335	2	FSM	ENSMUSG00000025586.18	ENSMUST00000124937.2	335	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCATGATCAGTTGCCA	NA	False	NA	NA	False	AGTAAA	-26	NA	81105140	81085971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81086126_81104959
ENSMUST00000124949.2	chr2	-	1589	5	FSM	ENSMUSG00000039033.12	ENSMUST00000124949.2	1589	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	8.8423695919137	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTCTCAGTGTTTGCC	NA	False	NA	NA	False	NA	NA	NA	139884134	139818451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013
ENSMUST00000124967.2	chr8	-	611	3	FSM	ENSMUSG00000090137.9	ENSMUST00000124967.2	611	3	0	0	0	0	multi-exon	FALSE	canonical	3	22365	junction_1	190	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGCTACGCACGCCTG	NA	False	NA	NA	False	NA	NA	NA	70962595	70961079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70961179_70961945_70962033_70962170
ENSMUST00000124968.8	chr13	+	546	4	FSM	ENSMUSG00000021496.13	ENSMUST00000124968.8	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_3	31.7210060089875	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGTTATTTGTCATTA	NA	False	NA	15	True	AATACA	-18	NA	55875180	55924643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
ENSMUST00000124973.9	chr1	+	7430	52	FSM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	100.054291298415	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTGACGAATCTGTTT	NA	False	NA	-95	True	AATAGA	-44	NA	150268588	150325566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ENSMUST00000124975.2	chr4	+	282	3	FSM	ENSMUSG00000085525.8	ENSMUST00000124975.2	282	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	186	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGCTGTTCACATT	NA	False	NA	33	True	NA	NA	NA	146206941	146215004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146207052_146209452_146209546_146214925
ENSMUST00000124992.8	chr4	+	3530	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTACTGGTGTTACTA	-32	True	NA	28	True	AATAAA	-38	NA	33031415	33052363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
ENSMUST00000124992.8-0	chr4	+	1194	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	0	2336	0	-2336	multi-exon	FALSE	canonical	3	77	junction_6	15.4813910675932	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGATTGTTTACAAAAAGA	-32	True	NA	23	True	ATTAAA	-23	NA	33031415	33050027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
ENSMUST00000124996.8	chr13	+	474	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTTCATTTTACTTT	NA	False	NA	17	True	AATAAA	-17	NA	34346946	34362151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34347233_34361963
ENSMUST00000124996.8-0	chr13	+	416	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	58	0	58	0	multi-exon	FALSE	canonical	3	173	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTTCATTTTACTTT	NA	False	NA	17	True	AATAAA	-17	NA	34347004	34362151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34347233_34361963
ENSMUST00000125024.8	chr2	+	3688	6	FSM	ENSMUSG00000047909.12	ENSMUST00000125024.8	3688	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	23.3871759731696	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTATTCAAGCTCTAA	4804	False	NA	11	True	AATAAA	-13	NA	11783337	11795114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_11783714_11784487_11784709_11786287_11788568_11789101_11789264_11791034_11791114_11794544
ENSMUST00000125028.2	chr3	-	681	3	FSM	ENSMUSG00000028179.13	ENSMUST00000125028.2	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_2	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAATTTCTGAGAGGCA	NA	False	NA	NA	False	NA	NA	NA	157630688	157625336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157625750_157626591_157626674_157630502
ENSMUST00000125037.3	chr13	-	1867	5	FSM	ENSMUSG00000021411.17	ENSMUST00000125037.3	1867	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.20156211871642	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGAGAGGATGTTTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	34836664	34811823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34812872_34814333_34814446_34822147_34822266_34822994_34823082_34836162
ENSMUST00000125040.8	chr16	-	2200	5	FSM	ENSMUSG00000071533.12	ENSMUST00000125040.8	2200	5	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_4	790.763357459107	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTCTTATTTTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	55850059	55835868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844750_55849965
ENSMUST00000125053.8	chr5	-	5672	27	FSM	ENSMUSG00000029478.17	ENSMUST00000125053.8	5672	27	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_23	20.605372138031	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGCTTCTCACTGGGC	8191	False	NA	2	True	AATATA	-19	NA	125119876	125094216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808
ENSMUST00000125058.8	chr2	-	3565	5	FSM	ENSMUSG00000009555.17	ENSMUST00000125058.8	3565	5	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_2	100.143646827944	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	32601059	32595795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488
ENSMUST00000125064.8	chr11	-	4577	24	FSM	ENSMUSG00000017210.15	ENSMUST00000125064.8	4577	24	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_19	24.352173524914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTGTGGGGACAGTT	NA	False	NA	-2	True	AATAAA	-23	NA	98619660	98595416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610
ENSMUST00000125065.8	chr8	-	4646	29	FSM	ENSMUSG00000038102.16	ENSMUST00000125065.8	4646	29	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_17	20.7100980988818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCGTAAATACCTT	4051	False	NA	-11	True	AATAAA	-15	NA	47986505	47943163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ENSMUST00000125107.8	chr4	+	1551	7	FSM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_4	47.0558179187229	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTGTGTGTATTTATGT	NA	False	NA	23	True	NA	NA	NA	107747095	107754999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ENSMUST00000125127.8	chr18	+	1683	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	0	0	0	0	multi-exon	FALSE	canonical	3	1096	junction_3	900.996608699993	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACACGTTTGTTGTGGG	NA	False	NA	NA	False	AATAAA	-12	NA	80250012	80255947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
ENSMUST00000125148.2	chr11	+	831	4	FSM	ENSMUSG00000024414.14	ENSMUST00000125148.2	439	4	-20	-372	0	0	multi-exon	FALSE	canonical	3	93	junction_1	344.111416065592	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGAAAGGGACAGGACAG	NA	False	NA	19	True	NA	NA	NA	94544836	94550915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94544987_94547312_94547445_94547808_94547877_94550434
ENSMUST00000125165.2	chr4	+	1119	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACAGAAACGGCTAC	28	False	NA	NA	False	NA	NA	NA	12232832	12233951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_12232800_12234000
ENSMUST00000125172.8	chr11	+	1799	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	0	0	0	0	multi-exon	FALSE	canonical	3	4384	junction_3	774.980806213935	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557782	95571599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUST00000125183.2	chr3	-	923	3	FSM	ENSMUSG00000028099.9	ENSMUST00000125183.2	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGGTGTGTGCCAGT	NA	False	NA	-4	True	AATGAA	-19	NA	96634791	96630738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96631369_96633149_96633316_96634664
ENSMUST00000125184.8	chr8	-	508	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	202	1	0	0	multi-exon	FALSE	canonical	3	14257	junction_3	3914.7897346686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963029	70960913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
ENSMUST00000125208.2	chr3	-	977	2	FSM	ENSMUSG00000027881.15	ENSMUST00000125208.2	977	2	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGGAAACACAGGAG	5474	False	NA	84	True	AAAAAG	-33	NA	108812901	108811576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108812079_108812426
ENSMUST00000125245.8	chr7	+	2453	15	FSM	ENSMUSG00000038563.15	ENSMUST00000125245.8	2453	15	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	27.9482028190781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCTACTGGTTTGCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	82297836	82347892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086
ENSMUST00000125257.3	chr8	-	2079	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCTGTTAAATAATTTT	NA	False	NA	-73	True	AATAAA	-18	NA	91860655	91850196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ENSMUST00000125257.3-0	chr8	-	1760	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	0	319	0	-319	multi-exon	FALSE	canonical	3	258	junction_9	63.7020456287233	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860655	91850515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ENSMUST00000125260.8	chr16	-	3875	10	FSM	ENSMUSG00000022537.19	ENSMUST00000125260.8	3875	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.32814653397489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTATGCCTTACTTC	NA	False	NA	NA	False	AATACA	-13	NA	30369357	30336547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30336664_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ENSMUST00000125268.2	chr8	+	709	3	FSM	ENSMUSG00000031960.15	ENSMUST00000125268.2	709	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	437.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGATCCGAGAGCGGTT	NA	False	NA	NA	False	NA	NA	NA	111759775	111763582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111760174_111760271_111760541_111763540
ENSMUST00000125270.8	chr2	+	744	3	FSM	ENSMUSG00000027455.17	ENSMUST00000125270.8	744	3	0	0	0	0	multi-exon	FALSE	canonical	3	1340	junction_1	49	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAATCTTGTAATAGAAT	NA	False	NA	NA	False	NA	NA	NA	151336209	151343157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151336333_151338503_151338602_151342634
ENSMUST00000125276.2	chr2	-	2668	3	FSM	ENSMUSG00000049922.9	ENSMUST00000125276.2	2668	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	25.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAGATACAGCATGTTT	NA	False	NA	NA	False	AATAAA	-21	NA	92290883	92283111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92285120_92289011_92289536_92290747
ENSMUST00000125290.8	chr8	+	2410	7	FSM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	8.31998931623246	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAACAACAAAGCCA	NA	False	NA	-18	True	NA	NA	NA	71858659	71862512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ENSMUST00000125304.8	chr1	-	3378	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTCTTGTCAGAAGTG	NA	False	NA	NA	False	AATAGA	-13	NA	36484352	36461145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ENSMUST00000125304.8-0	chr1	-	2257	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	0	1121	0	0	multi-exon	FALSE	canonical	3	121	junction_1	29.2707278728098	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCTGGCTCAGTGGCC	NA	False	NA	-3	True	CATAAA	-21	NA	36484352	36462266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ENSMUST00000125314.8	chr8	-	3536	22	FSM	ENSMUSG00000031537.16	ENSMUST00000125314.8	3536	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	24.8396216299904	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196556	23149228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159742_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ENSMUST00000125316.2	chr5	-	986	2	FSM	ENSMUSG00000029730.17	ENSMUST00000125316.2	986	2	0	0	0	0	multi-exon	FALSE	canonical	3	2180	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	8422	False	NA	-25	True	AATAAA	-15	NA	138163978	138162861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138163183_138163313
ENSMUST00000125322.8	chr2	+	3601	6	FSM	ENSMUSG00000036202.17	ENSMUST00000125322.8	3601	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	293.049210884452	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGAGTTTATTTTCT	NA	False	NA	49	True	AATAAA	-26	NA	52000995	52012068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_52003013_52006259_52006407_52006853_52006963_52009028_52009183_52010271_52010381_52011003
ENSMUST00000125328.2-1	chr13	-	4905	5	FSM	ENSMUSG00000046351.12	ENSMUST00000125328.2	815	5	0	-4090	0	0	multi-exon	FALSE	canonical	3	71	junction_1	23.1124966197942	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTCCACTATACTA	9020	False	NA	0	True	AATAAA	-22	NA	23553364	23537272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553304
ENSMUST00000125340.8	chr5	-	2394	7	FSM	ENSMUSG00000049550.18	ENSMUST00000125340.8	2394	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	5.8022983951764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAATGTTTTGGGTCTCT	7532	False	NA	-28	True	ATTAAA	-23	NA	123741873	123715880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661
ENSMUST00000125341.2	chr6	-	3610	20	FSM	ENSMUSG00000041372.11	ENSMUST00000125341.2	3610	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	18.2012449727912	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGACTCTCCTGCCAG	7577	False	NA	NA	False	AAGAAA	-10	NA	120219604	120180033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192465_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120219523
ENSMUST00000125349.8	chr2	-	1343	6	FSM	ENSMUSG00000026669.15	ENSMUST00000125349.8	1343	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_5	93.7285442114621	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	870	False	NA	0	True	AATAAA	-38	NA	5000705	4995534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531
ENSMUST00000125362.8	chr18	-	2814	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	64.5652125115891	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAATTGTTGCCTTTT	NA	False	NA	-5	True	ATTAAA	-25	NA	88912476	88886618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ENSMUST00000125366.8	chr2	+	1543	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	27	3634	0	0	multi-exon	FALSE	canonical	3	117	junction_7	14.82905345753	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGCTCTCAGCAGCTC	NA	False	NA	21	True	ATTAAA	-35	NA	152511407	152546956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUST00000125374.8	chr6	+	391	3	FSM	ENSMUSG00000085412.8	ENSMUST00000125374.8	391	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	38	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	778	False	NA	NA	False	NA	NA	NA	52079928	52089508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_52080017_52083750_52083877_52089331
ENSMUST00000125376.8	chr2	+	3885	6	FSM	ENSMUSG00000036202.17	ENSMUST00000125376.8	3885	6	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	98.0864924441689	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATGTTACATACCACT	NA	False	NA	1	True	ATTAAA	-13	NA	52001472	52012121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271
ENSMUST00000125389.2	chr11	-	1180	6	FSM	ENSMUSG00000018761.15	ENSMUST00000125389.2	646	6	-69	-465	0	0	multi-exon	FALSE	canonical	3	53	junction_3	239.282761602252	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	6816	False	NA	-4	True	AATAAA	-33	NA	69553413	69547522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69549391_69549525_69549636_69549703_69553294
ENSMUST00000125390.8	chr2	+	1960	3	FSM	ENSMUSG00000037761.17	ENSMUST00000125390.8	1960	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	158466807	158471077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158467437_158468246_158468477_158469976
ENSMUST00000125407.8	chr2	-	2376	15	FSM	ENSMUSG00000027198.17	ENSMUST00000125407.8	2376	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	156.855467724597	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCACCTCCCGGGGCTCCG	NA	False	NA	NA	False	NA	NA	NA	93652890	93526471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93592967_93606339_93606427_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ENSMUST00000125430.2	chr6	+	1680	5	FSM	ENSMUSG00000029910.15	ENSMUST00000125430.2	1680	5	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_4	89.7646227642048	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATTAAGCCTTGT	NA	False	NA	48	True	TATAAA	-25	NA	66512408	66518004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ENSMUST00000125430.2-0	chr6	+	3524	5	FSM	ENSMUSG00000029910.15	ENSMUST00000125430.2	1680	5	0	-1844	0	1844	multi-exon	FALSE	canonical	3	769	junction_4	89.7646227642048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAAAGACCACTACTAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	66512408	66519848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ENSMUST00000125436.8	chr6	-	2491	10	FSM	ENSMUSG00000004267.17	ENSMUST00000125436.8	2491	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.26565107262102	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	8715	False	NA	-6	True	ATTAAA	-17	NA	124745300	124737327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124738326_124738610_124738670_124739615_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200
ENSMUST00000125522.2	chr5	+	3357	2	FSM	ENSMUSG00000029364.16	ENSMUST00000125522.2	3357	2	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-13	NA	117495369	117504843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_117495539_117501655
ENSMUST00000125541.2	chr4	-	1654	2	FSM	ENSMUSG00000056596.9	ENSMUST00000125541.2	1654	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACGTGTGGTTTTAAGG	NA	False	NA	-4	True	AATAAA	-18	NA	133225861	133218410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133219142_133224938
ENSMUST00000125554.8	chr6	-	1100	5	FSM	ENSMUSG00000055850.13	ENSMUST00000125554.8	1100	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	461.587681269767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTCTTAGTTTCTGGC	8480	False	NA	NA	False	NA	NA	NA	72339343	72336854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338294_72338354_72339258
ENSMUST00000125567.8	chr19	-	5588	20	FSM	ENSMUSG00000035735.11	ENSMUST00000125567.8	5588	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_17	2.47200390859313	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTCTGCCTCCTGTGGT	NA	False	NA	NA	False	TATAAA	-15	NA	10282221	10222631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10225989_10227732_10227921_10228430_10228561_10229402_10229603_10230693_10230767_10231080_10231150_10232170_10232314_10233024_10233106_10233487_10233566_10233660_10233745_10234181_10234336_10238014_10238140_10239857_10239936_10240457_10240593_10242371_10242460_10246550_10246690_10247080_10247183_10248374_10248564_10248857_10248996_10282184
ENSMUST00000125581.2	chr6	-	2565	2	FSM	ENSMUSG00000000938.12	ENSMUST00000125581.2	2565	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTAATTTCACCTCTT	9663	False	NA	-13	True	AATAAA	-15	NA	52211919	52208176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52209761_52210938
ENSMUST00000125612.2	chr10	+	1169	8	FSM	ENSMUSG00000020059.10	ENSMUST00000125612.2	1169	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	7.98212288268514	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTTCAGTATATC	NA	False	NA	4	True	AATAAA	-16	NA	88295525	88309098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_88295575_88298322_88298466_88299224_88299289_88299697_88299733_88302300_88302419_88303144_88303245_88305407_88305507_88308537
ENSMUST00000125625.2	chr5	-	915	3	FSM	ENSMUSG00000025337.11	ENSMUST00000125625.2	915	3	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_2	31.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCACCTCCAGCCAGACT	NA	False	NA	NA	False	NA	NA	NA	130282926	130276724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_130277292_130279654_130279856_130282779
ENSMUST00000125627.8	chr4	+	2336	16	FSM	ENSMUSG00000028572.14	ENSMUST00000125627.8	2336	16	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	15.7160922482516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGTAG	4837	False	NA	NA	False	AAGAAA	-27	NA	95855599	95903717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_95855794_95862622_95862709_95877874_95877948_95880385_95880437_95881302_95881436_95884000_95884069_95884995_95885059_95886931_95887016_95889406_95889574_95890680_95890822_95891718_95891921_95892533_95892645_95897538_95897627_95897705_95897767_95901434_95901576_95903044
ENSMUST00000125630.8	chr9	+	1611	14	FSM	ENSMUSG00000041506.16	ENSMUST00000125630.8	1611	14	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_10	77.2574272104087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGTTCTCCCTTGTTCC	NA	False	NA	15	True	ATTAAA	-15	NA	106354516	106362615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUST00000125682.2	chr10	+	1182	6	FSM	ENSMUSG00000006728.13	ENSMUST00000125682.2	1182	6	0	0	0	0	multi-exon	FALSE	canonical	3	4641	junction_2	425.007011706866	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTACTGGACCTGGGC	NA	False	NA	NA	False	NA	NA	NA	126899736	126902100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969
ENSMUST00000125705.9	chr7	+	657	3	FSM	ENSMUSG00000002205.17	ENSMUST00000125705.9	657	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	69	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGCCAGGAAGTCCCG	NA	False	NA	NA	False	NA	NA	NA	44398366	44403379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44398822_44401538_44401601_44403239
ENSMUST00000125707.2	chr4	-	646	2	FSM	ENSMUSG00000028568.17	ENSMUST00000125707.2	646	2	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTAATGAAATGTGTCA	NA	False	NA	NA	False	CATAAA	-18	NA	108683377	108675969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108676535_108683296
ENSMUST00000125726.8	chr4	-	807	5	FSM	ENSMUSG00000059291.16	ENSMUST00000125726.8	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	4361.44284469027	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACTTGATCCAAAAAGCT	NA	False	NA	-47	True	NA	NA	NA	135780307	135777300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877
ENSMUST00000125733.8	chr12	-	2526	6	FSM	ENSMUSG00000050671.13	ENSMUST00000125733.8	2526	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	6.95701085237043	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATAAAGGATTTGGGG	7669	False	NA	1	True	AATAAA	-21	NA	87346479	87325411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87326977_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
ENSMUST00000125747.8	chrX	-	1737	7	FSM	ENSMUSG00000044348.15	ENSMUST00000125747.8	1737	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	13.5359603361646	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAGATTATCCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	135938781	135903530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135938678
ENSMUST00000125747.8-0	chrX	-	3197	7	FSM	ENSMUSG00000044348.15	ENSMUST00000125747.8	1737	7	0	-1460	0	-267	multi-exon	FALSE	canonical	0	0	junction_6	13.5359603361646	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGTTGTACTAAGTATC	NA	False	NA	NA	False	NA	NA	NA	135938781	135902070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135904559_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135938678
ENSMUST00000125760.8	chr1	+	665	4	FSM	ENSMUSG00000026349.15	ENSMUST00000125760.8	665	4	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	16.8193010820572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCATGGCTTCAGTGT	NA	False	NA	NA	False	NA	NA	NA	127701900	127721326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094
ENSMUST00000125763.3	chr18	-	7909	9	FSM	ENSMUSG00000048410.18	ENSMUST00000125763.3	7909	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	5.699506557589	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGGTGTACTAAGTGC	NA	False	NA	NA	False	AATAAA	-20	NA	84607629	84225825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_84228207_84333930_84334110_84361070_84361192_84369024_84369109_84372649_84372817_84450484_84450560_84570994_84571110_84576451_84581172_84607562
ENSMUST00000125774.2	chr1	+	1495	7	FSM	ENSMUSG00000026426.11	ENSMUST00000125774.2	1495	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	183.490235889179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135075406	135084007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135075466_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ENSMUST00000125776.8	chr4	-	761	3	FSM	ENSMUSG00000078570.11	ENSMUST00000125776.8	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	71	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGACCTTTCTTTTCT	7724	False	NA	-3	True	ATTAAA	-20	NA	124744454	124743278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124743756_124744024_124744227_124744372
ENSMUST00000125780.2	chr4	+	1065	5	FSM	ENSMUSG00000009863.15	ENSMUST00000125780.2	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	2820	junction_2	248.862788500009	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACCACCACTTCAGACA	NA	False	NA	NA	False	NA	NA	NA	140688713	140701608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974
ENSMUST00000125784.8	chr10	+	3392	13	FSM	ENSMUSG00000020156.17	ENSMUST00000125784.8	3392	13	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	107.02790394202	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTCATAGTCATTGC	8439	False	NA	16	True	TATAAA	-14	NA	80062488	80079734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80062539_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUST00000125786.8	chr4	+	2937	8	FSM	ENSMUSG00000059939.14	ENSMUST00000125786.8	2937	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	44.3313129302804	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208580_156209873
ENSMUST00000125801.8	chr4	-	645	5	FSM	ENSMUSG00000028873.17	ENSMUST00000125801.8	645	5	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_1	172.905140178076	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGGCTTCTCTGGCA	NA	False	NA	NA	False	AATACA	-42	NA	124830574	124817416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUST00000125821.2	chr3	+	882	2	FSM	ENSMUSG00000037894.14	ENSMUST00000125821.2	882	2	0	0	0	0	multi-exon	FALSE	canonical	3	14469	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATCCCACACATCCACA	NA	False	NA	NA	False	TTTAAA	-44	NA	137570888	137572147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137571395_137571771
ENSMUST00000125826.8	chr2	-	1566	6	FSM	ENSMUSG00000033256.15	ENSMUST00000125826.8	1566	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	30.854497241083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCCCGCCCCAGTCAG	NA	False	NA	21	True	NA	NA	NA	122199643	122179608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122199127
ENSMUST00000125831.8	chr11	+	4067	20	FSM	ENSMUSG00000000976.14	ENSMUST00000125831.8	4067	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	14.4999761199536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAATTGTGTTTTCAAG	4035	False	NA	4	True	AATAAA	-23	NA	83644539	83672847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83644972_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUST00000125840.8	chr11	-	3134	7	FSM	ENSMUSG00000001034.18	ENSMUST00000125840.8	3134	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	86.2491545852286	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385122	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383888_61384349_61384781_61384905
ENSMUST00000125848.2	chr2	-	2766	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCGGGGCGGCCACCAT	NA	False	NA	NA	False	AATAAA	-18	NA	26242112	26238132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26240571_26241784
ENSMUST00000125848.2-0	chr2	-	592	2	FSM	ENSMUSG00000075467.5	ENSMUST00000125848.2	2766	2	0	2174	0	-2174	multi-exon	FALSE	canonical	3	60	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCGGGCCTGGGCTCCT	NA	False	NA	-23	True	AGTAAA	-16	NA	26242112	26240306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26240571_26241784
ENSMUST00000125866.4	chr5	+	4512	34	FSM	ENSMUSG00000039765.16	ENSMUST00000125866.4	4512	34	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	5.67306396307227	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCATGGACTGGAGG	NA	False	NA	NA	False	ACTAAA	-3	NA	43829630	43896659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_43829747_43831033_43831158_43838630_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639
ENSMUST00000125871.8	chr13	-	4292	11	FSM	ENSMUSG00000034928.17	ENSMUST00000125871.8	4292	11	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_9	222.59883198256	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54835907	54827213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54835306
ENSMUST00000125893.8	chr8	+	825	4	FSM	ENSMUSG00000005161.16	ENSMUST00000125893.8	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_2	288.076764460833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGACGCTCTGTAGACG	NA	False	NA	NA	False	NA	NA	NA	85696485	85698250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85696974_85697064_85697219_85697915_85698039_85698190
ENSMUST00000125894.9	chr6	-	1216	11	FSM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	9.65453261426984	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGTCTGAGCACTCAG	9882	False	NA	0	True	TATAAA	-18	NA	83133379	83129690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156_83133228_83133296
ENSMUST00000125923.2	chr5	+	1889	3	FSM	ENSMUSG00000039754.11	ENSMUST00000125923.2	1040	3	-12	-837	0	0	multi-exon	FALSE	canonical	2	7	junction_1	27.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCTCCTTTTCCCAT	NA	False	NA	NA	False	AATAAA	-26	NA	136164999	136170469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136165254_136168191_136168390_136169032
ENSMUST00000125929.2	chr11	+	779	2	FSM	ENSMUSG00000020456.18	ENSMUST00000125929.2	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTGTTTCTATTTTT	NA	False	NA	NA	False	TATAAA	-12	NA	6241640	6247677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6241694_6246951
ENSMUST00000125964.8	chr7	-	801	6	FSM	ENSMUSG00000005575.17	ENSMUST00000125964.8	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	904.553503116317	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCAATGGGCCTGGGTC	9089	False	NA	-94	True	NA	NA	NA	12771554	12769255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771481
ENSMUST00000125971.2	chr16	+	3445	13	FSM	ENSMUSG00000022842.19	ENSMUST00000125971.2	3445	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_12	6.66406199117492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTCACTTTTTTAAAA	NA	False	NA	NA	False	GATAAA	-27	NA	20451619	20465235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090
ENSMUST00000125978.2	chr4	+	760	2	FSM	ENSMUSG00000029009.18	ENSMUST00000125978.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCATAGAGTGAGTGCT	NA	False	NA	NA	False	NA	NA	NA	148126058	148128413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148126287_148127881
ENSMUST00000125981.8	chr4	-	2363	12	FSM	ENSMUSG00000028849.18	ENSMUST00000125981.8	2363	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_11	53.7355016002587	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126133904	126125959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815
ENSMUST00000125995.8	chr9	-	4849	8	FSM	ENSMUSG00000037287.16	ENSMUST00000125995.8	4849	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	17.1607049947946	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	NA	False	NA	-1	True	ATTAAA	-17	NA	42368895	42323611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42368853
ENSMUST00000125997.2	chr15	-	4435	6	FSM	ENSMUSG00000005360.15	ENSMUST00000125997.2	4435	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	7.28285658241325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGATGAATCAGCATGAG	2624	False	NA	NA	False	NA	NA	NA	8680990	8664209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026
ENSMUST00000126008.8	chr1	-	2074	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	0	2546	0	0	multi-exon	FALSE	canonical	3	170	junction_12	17.2527726254451	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATTGACATCTGCTT	NA	False	NA	-2	True	AATAAA	-34	NA	43866960	43788671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ENSMUST00000126009.2	chr4	-	810	4	FSM	ENSMUSG00000087381.9	ENSMUST00000126009.2	810	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGGCTTCAGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	156116079	156110753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_156111344_156112931_156113012_156114878_156114974_156116034
ENSMUST00000126019.2	chrX	+	1364	5	FSM	ENSMUSG00000031311.18	ENSMUST00000126019.2	1364	5	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	1520.69496859166	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	100473340	100486037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483287_100485121
ENSMUST00000126040.8	chr10	+	1131	5	FSM	ENSMUSG00000025393.13	ENSMUST00000126040.8	1131	5	0	0	0	0	multi-exon	FALSE	canonical	3	10302	junction_3	531.371103843632	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGCGAGAGCTCAGGTT	NA	False	NA	-91	True	NA	NA	NA	127921614	127926029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUST00000126062.2	chr9	-	823	3	FSM	ENSMUSG00000011114.19	ENSMUST00000126062.2	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	1703	junction_2	71.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCATATTAAACTGGTT	NA	False	NA	NA	False	NA	NA	NA	37568464	37565151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_37565733_37566317_37566389_37568293
ENSMUST00000126071.9	chr13	+	4322	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	132.701770900015	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCAGCTGTGGGTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	54769596	54811876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUST00000126080.2	chr2	-	2070	3	FSM	ENSMUSG00000087528.2	ENSMUST00000126080.2	2070	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATTGTTAAGTGTAACAA	NA	False	NA	NA	False	AATAAA	-14	NA	129072499	129066111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_129067831_129071441_129071672_129072378
ENSMUST00000126093.8	chr7	+	1991	10	FSM	ENSMUSG00000030555.17	ENSMUST00000126093.8	1991	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	24.6671671620895	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTGTGTTTGAAA	NA	False	NA	13	True	AATAAA	-18	NA	67297197	67376324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_67297594_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ENSMUST00000126112.8	chr2	-	3360	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCTTAAAATGATTTT	NA	False	NA	-9	True	AATAAA	-25	NA	22930207	22830084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUST00000126112.8-0	chr2	-	2922	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	-35	473	0	-177	multi-exon	FALSE	canonical	3	161	junction_4	54.5400521080666	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATGATTCCATATAT	NA	False	NA	-14	True	ATTAAA	-17	NA	22930242	22830557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUST00000126116.3	chr7	-	1429	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_10	279.009032111866	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	-9	True	NA	NA	NA	29894473	29886367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
ENSMUST00000126117.2	chrX	-	2220	3	FSM	ENSMUSG00000015290.16	ENSMUST00000126117.2	2220	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	782.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	False	NA	-7	True	AATAAA	-19	NA	73412164	73409324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73411193_73411306_73411516_73412021
ENSMUST00000126118.9	chr8	+	3332	11	FSM	ENSMUSG00000031565.19	ENSMUST00000126118.9	3332	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	76.3363609297692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26053420	26064801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ENSMUST00000126120.8	chr9	+	1613	3	FSM	ENSMUSG00000033543.18	ENSMUST00000126120.8	1613	3	0	0	0	0	multi-exon	FALSE	canonical	3	899	junction_2	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGAAAAAAAAAATC	NA	False	NA	NA	False	NA	NA	NA	69919852	69925503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_69919944_69922573_69922693_69924100
ENSMUST00000126135.2	chr4	-	2512	14	FSM	ENSMUSG00000028680.15	ENSMUST00000126135.2	2512	14	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_9	17.6963206151338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGGCCTTATCATTCC	3238	False	NA	2	True	AATAAA	-15	NA	116991141	116985851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116986376_116986482_116986597_116987156_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ENSMUST00000126136.8	chr1	-	1573	3	FSM	ENSMUSG00000067071.9	ENSMUST00000126136.8	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	9	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATGTGTCCAATGTGTG	NA	False	NA	-1	True	AATAAA	-35	NA	91340944	91339204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_91340525_91340614_91340702_91340778
ENSMUST00000126148.2	chr11	-	513	3	FSM	ENSMUSG00000025137.16	ENSMUST00000126148.2	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_2	25	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCCCAGAGCAGTGGCA	NA	False	NA	NA	False	NA	NA	NA	120508736	120506001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120506279_120506674_120506764_120508589
ENSMUST00000126166.8	chr14	-	2369	12	FSM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_11	105.5899600787	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3823	False	NA	0	True	AATAAA	-25	NA	54891073	54879617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890991
ENSMUST00000126168.8	chr5	+	3577	9	FSM	ENSMUSG00000041264.17	ENSMUST00000126168.8	3577	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	123.51492824756	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	False	NA	12	True	ATTAAA	-12	NA	149121487	149152240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130707_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUST00000126174.2	chr8	-	473	2	FSM	ENSMUSG00000031683.17	ENSMUST00000126174.2	473	2	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTATGTCTCAGTCTTT	NA	False	NA	-7	True	NA	NA	NA	79536839	79534665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79534875_79536575
ENSMUST00000126177.8	chr18	+	679	2	FSM	ENSMUSG00000024571.16	ENSMUST00000126177.8	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	3077	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTCAGGACTGTATA	NA	False	NA	NA	False	NA	NA	NA	80250060	80250991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80250117_80250368
ENSMUST00000126184.2	chr15	-	580	2	FSM	ENSMUSG00000022285.18	ENSMUST00000126184.2	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTGACATCTGCAACG	1863	False	NA	NA	False	AATACA	-20	NA	36792658	36790955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36791233_36792355
ENSMUST00000126189.3	chr11	+	1462	6	FSM	ENSMUSG00000061469.4	ENSMUST00000126189.3	1462	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	4.24264068711928	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCCCCCGTGCCTCATC	NA	False	NA	NA	False	AAGAAA	-30	NA	51111299	51125880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51111470_51122618_51122914_51123233_51123435_51124291_51124380_51124877_51125184_51125478
ENSMUST00000126245.2	chr3	-	1875	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_13	37.3331396162909	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACGCATTTGTACATTTA	NA	False	NA	-7	True	AATAAA	-44	NA	88821306	88816921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ENSMUST00000126248.8	chr2	+	1944	17	FSM	ENSMUSG00000027642.16	ENSMUST00000126248.8	1944	17	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_15	739.834966288935	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGACCCTGAAGGCTG	NA	False	NA	NA	False	NA	NA	NA	157125502	157167655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
ENSMUST00000126267.8	chr5	-	2721	7	FSM	ENSMUSG00000029127.16	ENSMUST00000126267.8	2721	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	14.1391890385081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATATTTTGTAAATT	NA	False	NA	NA	False	AATAAA	-22	NA	38377757	38357589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38370651_38371728_38373790_38373958_38377666
ENSMUST00000126280.2	chr17	-	2943	3	FSM	ENSMUSG00000024163.18	ENSMUST00000126280.2	2943	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGAGTGCCTTTTTTC	NA	False	NA	-2	True	AATAAA	-26	NA	25143185	25134327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25137114_25142789_25142882_25143120
ENSMUST00000126283.8	chrX	-	2153	7	FSM	ENSMUSG00000034457.11	ENSMUST00000126283.8	2153	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	9.18331820930394	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCACAAGTGTAAAAAGC	NA	False	NA	NA	False	ATTAAA	-17	NA	96420822	96381396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ENSMUST00000126286.8	chrX	+	1449	4	FSM	ENSMUSG00000087193.8	ENSMUST00000126286.8	1449	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	38.6091526281874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	7727	False	NA	29	True	TATAAA	-19	NA	7915486	7939198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7915823_7926454_7926526_7936874_7937304_7938585
ENSMUST00000126299.2	chr11	-	3269	16	FSM	ENSMUSG00000020918.15	ENSMUST00000126299.2	3269	16	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_8	109.540170206591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6795	False	NA	-1	True	AATAAA	-18	NA	100603275	100595571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUST00000126306.2	chr17	-	1976	3	FSM	ENSMUSG00000037098.19	ENSMUST00000126306.2	1976	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAATTAAAACTGAAA	NA	False	NA	NA	False	NA	NA	NA	26288209	26255244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26255473_26255562_26255657_26286555
ENSMUST00000126319.8	chr17	-	2492	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	29	2705	0	-196	multi-exon	FALSE	canonical	3	500	junction_14	40.675587289682	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTTTCTCATGTGA	NA	False	NA	-27	True	NA	NA	NA	24926605	24919627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ENSMUST00000126343.2	chr5	+	916	4	FSM	ENSMUSG00000029622.17	ENSMUST00000126343.2	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	1775	junction_1	116.219141663019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAACCTGCTGCTCAAT	8118	False	NA	NA	False	NA	NA	NA	145051110	145061065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378
ENSMUST00000126346.2	chr4	+	1894	10	FSM	ENSMUSG00000029068.17	ENSMUST00000126346.2	1894	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	298.536802123662	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAAATTTTACGTGGT	5633	False	NA	-32	True	NA	NA	NA	155897953	155908760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155898026_155899699_155899821_155902379_155902445_155902995_155903122_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ENSMUST00000126356.8	chr7	+	3818	6	FSM	ENSMUSG00000030753.16	ENSMUST00000126356.8	1123	6	0	-2695	0	0	multi-exon	FALSE	canonical	3	28	junction_2	87.2958189147682	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352309	98367269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362103_98364188
ENSMUST00000126386.8	chr11	-	1030	7	FSM	ENSMUSG00000019303.15	ENSMUST00000126386.8	1030	7	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_2	24.7571538482651	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAGATATCAAACCTGG	NA	False	NA	4	True	TATAAA	-30	NA	100986226	100982957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
ENSMUST00000126390.8	chr10	+	2595	20	FSM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_9	41.6677266716506	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTCTGGAGAATACAT	NA	False	NA	2	True	AATAAA	-13	NA	17931687	18000880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ENSMUST00000126402.2	chr6	-	1710	2	FSM	ENSMUSG00000000938.12	ENSMUST00000126402.2	1710	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTAATTTCACCTC	8397	False	NA	-15	True	AATAAA	-13	NA	52210304	52208178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52209761_52210176
ENSMUST00000126419.2	chr16	+	452	3	FSM	ENSMUSG00000098274.8	ENSMUST00000126419.2	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	12575	junction_2	818.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACAATTTATTGTGTTT	NA	False	NA	NA	False	AATACA	-36	NA	55786909	55790137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_55786986_55787422_55787534_55789872
ENSMUST00000126435.8	chr8	-	1239	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	-2	1582	0	-466	multi-exon	FALSE	canonical	3	192	junction_2	18.1159460144923	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAAAGTTCATCTTCAC	6964	False	NA	-8	True	AATAAA	-14	NA	84983955	84978116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ENSMUST00000126468.8	chr4	-	863	9	FSM	ENSMUSG00000050323.15	ENSMUST00000126468.8	863	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	109.001146782958	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTTAAAGAAAATCCAG	36	False	NA	NA	False	NA	NA	NA	11076149	11051212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073139_11073244_11075979
ENSMUST00000126485.2	chr17	-	2481	3	FSM	ENSMUSG00000071267.12	ENSMUST00000126485.2	2481	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	18	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22181445	22158725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22160832_22172868_22173035_22181236
ENSMUST00000126486.8	chr10	+	2495	13	FSM	ENSMUSG00000019843.15	ENSMUST00000126486.8	2495	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	42.9213589667843	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGGACAGGTGTTTGG	NA	False	NA	NA	False	AATAAA	-27	NA	39245798	39440419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39246187_39271000_39271041_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUST00000126519.2	chr4	+	441	3	FSM	ENSMUSG00000028936.16	ENSMUST00000126519.2	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	2854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTCGGCGGAGGAGTC	NA	False	NA	NA	False	NA	NA	NA	152411523	152414503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152411817_152411937_152412043_152414460
ENSMUST00000126523.9	chr18	+	1282	9	FSM	ENSMUSG00000024410.16	ENSMUST00000126523.9	1282	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	11.1740491765519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTGATTTGATGTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	12301773	12314177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722
ENSMUST00000126529.2	chr17	-	1335	3	FSM	ENSMUSG00000024048.16	ENSMUST00000126529.2	1335	3	0	0	0	0	multi-exon	FALSE	canonical	3	3116	junction_2	53	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTGTTTAGCGTTA	2316	False	NA	-19	True	ATTAAA	-14	NA	71309160	71301288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71301780_71303104_71303891_71309102
ENSMUST00000126534.8	chr7	+	1578	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	17	2393	0	325	multi-exon	TRUE	canonical	3	366	junction_1	56.4938140012529	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTTTCTCATATGTT	NA	False	NA	15	True	CATAAA	-17	NA	100142560	100148834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUST00000126561.8	chr8	-	2154	9	FSM	ENSMUSG00000031591.15	ENSMUST00000126561.8	2154	9	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_6	118.080944165433	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGTCATGCATGCTG	NA	False	NA	-21	True	AATAAA	-18	NA	41803074	41793697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586
ENSMUST00000126591.2	chrX	-	712	4	FSM	ENSMUSG00000086807.9	ENSMUST00000126591.2	712	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	6.59966329107444	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCCAGTTTGAGCTG	NA	False	NA	NA	False	AATAAA	-12	NA	138258487	138248239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_138248639_138255751_138255851_138257038_138257123_138258357
ENSMUST00000126608.2	chrX	+	989	2	FSM	ENSMUSG00000016319.4	ENSMUST00000126608.2	989	2	0	0	0	0	multi-exon	FALSE	canonical	3	12606	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAGCTTGTGGTAGATA	NA	False	NA	NA	False	NA	NA	NA	36059306	36061296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36059495_36060495
ENSMUST00000126613.2	chr8	+	1029	3	FSM	ENSMUSG00000019428.17	ENSMUST00000126613.2	1029	3	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_2	20	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCGTGGAAATGGCTG	NA	False	NA	NA	False	NA	NA	NA	70984833	70987517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70985400_70986766_70986845_70987132
ENSMUST00000126634.8	chr1	+	2534	10	FSM	ENSMUSG00000026553.18	ENSMUST00000126634.8	2534	10	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_8	105.686118083481	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAGAATAATAAAAAAATAA	3066	False	NA	NA	False	NA	NA	NA	171910397	171932201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675
ENSMUST00000126641.2	chr4	+	3754	6	FSM	ENSMUSG00000028676.18	ENSMUST00000126641.2	3754	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	623.730198082472	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4321	False	NA	23	True	AATAAA	-28	NA	135583057	135597219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135583603_135585615_135585721_135589084_135589189_135590350_135590514_135590833_135590888_135594436
ENSMUST00000126658.8	chr3	-	1586	9	FSM	ENSMUSG00000074653.11	ENSMUST00000126658.8	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	9.37333318515884	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGCTGCTTTGTAAAC	NA	False	NA	NA	False	NA	NA	NA	30753979	30733206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_30733533_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305_30745450_30749635_30749780_30753847
ENSMUST00000126664.8	chr5	+	6052	23	FSM	ENSMUSG00000046808.18	ENSMUST00000126664.8	6052	23	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_3	13.360930461982	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATTACTCCTGTAACT	NA	False	NA	24	True	AATAAA	-29	NA	72360671	72456118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270
ENSMUST00000126690.8	chr9	-	4206	8	FSM	ENSMUSG00000036986.17	ENSMUST00000126690.8	4206	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	129.417848814747	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACCCTAACATTCTGAT	2272	False	NA	-12	True	AGTAAA	-12	NA	58156948	58125369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000126690.8-0	chr9	-	3872	8	FSM	ENSMUSG00000036986.17	ENSMUST00000126690.8	4206	8	-121	455	0	0	multi-exon	FALSE	canonical	3	33	junction_1	129.417848814747	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000126705.9	chr8	+	895	5	FSM	ENSMUSG00000014856.13	ENSMUST00000126705.9	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_2	13.1909059582729	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACGGCCGTGTGGGTGA	1	True	NA	13	True	AATAAA	-15	NA	106053019	106055684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055325_106055403
ENSMUST00000126725.2	chr4	-	836	2	FSM	ENSMUSG00000029036.19	ENSMUST00000126725.2	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTCCTGGACATTACT	NA	False	NA	NA	False	NA	NA	NA	155830802	155825290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155825810_155830485
ENSMUST00000126757.2	chr11	+	2568	7	FSM	ENSMUSG00000043857.17	ENSMUST00000126757.2	2568	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8.89600409672168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAATTGGTGGGATTT	NA	False	NA	NA	False	AATAAA	-24	NA	116863898	116877766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116864258_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
ENSMUST00000126805.8	chr6	-	953	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGCTCCCAGCAGCC	NA	False	NA	NA	False	NA	NA	NA	85428952	85423919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
ENSMUST00000126805.8-0	chr6	-	1002	5	FSM	ENSMUSG00000030008.10	ENSMUST00000126805.8	953	5	79	-128	54	0	multi-exon	FALSE	canonical	3	68	junction_4	38.4991883031318	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTTTGTGCCTGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	85428873	85423791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428738
ENSMUST00000126810.8	chr7	-	3251	10	FSM	ENSMUSG00000030741.16	ENSMUST00000126810.8	3251	10	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_6	44.3045019031801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976583	125969238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125974376_125975845_125975912_125976008
ENSMUST00000126839.8	chr2	+	1817	10	FSM	ENSMUSG00000027540.14	ENSMUST00000126839.8	4292	10	0	2475	0	2173	multi-exon	FALSE	canonical	1	2	junction_2	47.9021636666927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATT	1105	False	NA	NA	False	NA	NA	NA	167774291	167818830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167774477_167793875_167794000_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUST00000126846.2	chr5	+	2705	10	FSM	ENSMUSG00000040584.9	ENSMUST00000126846.2	2705	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	64.6271356836017	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGATAATGGTTATGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	8769818	8798570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ENSMUST00000126865.8	chr9	+	6287	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_17	28.1424945589406	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTTTGCCTTACGGT	NA	False	NA	23	True	AATAAA	-25	NA	45924117	46135492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ENSMUST00000126879.8	chr13	+	2909	8	FSM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	11.5564276663752	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATACCCTCCCCCCACCC	NA	False	NA	NA	False	NA	NA	NA	65426627	65445609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ENSMUST00000126882.2	chr5	-	466	2	FSM	ENSMUSG00000029499.12	ENSMUST00000126882.2	466	2	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGATTCCCAGCTCCC	NA	False	NA	NA	False	NA	NA	NA	110433985	110431389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110431620_110433749
ENSMUST00000126887.8	chr7	+	3749	18	FSM	ENSMUSG00000030562.18	ENSMUST00000126887.8	3749	18	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	3.42896273924463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCTGTGGAATTTCTA	NA	False	NA	NA	False	AATAAA	-15	NA	86895856	87047918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_86896111_86896695_86896792_86944995_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ENSMUST00000126893.8	chr17	-	1663	8	FSM	ENSMUSG00000024006.18	ENSMUST00000126893.8	1663	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	269.646177841426	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAAGAAATGTAATGT	NA	False	NA	NA	False	NA	NA	NA	29226919	29198739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29199497_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ENSMUST00000126947.8	chr2	+	2519	5	FSM	ENSMUSG00000014873.16	ENSMUST00000126947.8	2519	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	33.741665637606	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGCCAAACCAATATGT	NA	False	NA	26	True	CATAAA	-21	NA	26806392	26810184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26806516_26806716_26806872_26807439_26809068_26809203_26809371_26809738
ENSMUST00000126957.9	chr13	+	1731	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGATTTTGAAATAAATGAA	NA	False	NA	75	True	AATAAA	-2	NA	119565668	119593893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000126957.9-0	chr13	+	2803	11	FSM	ENSMUSG00000025451.16	ENSMUST00000126957.9	1731	11	-211	-861	0	0	multi-exon	FALSE	canonical	3	84	junction_1	97.4055953218294	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	46	True	AATAAA	-31	NA	119565457	119594754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUST00000126959.5	chr5	+	3360	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTGTCCTTCACAACCA	NA	False	NA	NA	False	NA	NA	NA	116576778	116603546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
ENSMUST00000126959.5-0	chr5	+	451	4	FSM	ENSMUSG00000086219.8	ENSMUST00000126959.5	3360	4	0	2909	0	480	multi-exon	FALSE	canonical	3	257	junction_3	60.4281023659982	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTGTTGTTGTTGTTTT	NA	False	NA	10	True	NA	NA	NA	116576778	116600637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_116576898_116577427_116577496_116599782_116599863_116600453
ENSMUST00000126961.2	chrX	-	640	1	FSM	ENSMUSG00000086580.2	ENSMUST00000126961.2	640	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGACTATGAAGTTAGAGT	NA	False	NA	NA	False	NA	NA	NA	30998758	30998118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_30998100_30998800
ENSMUST00000126967.2	chr2	+	854	2	FSM	ENSMUSG00000075514.5	ENSMUST00000126967.2	854	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTGCTACAATTGCCT	3609	False	NA	NA	False	NA	NA	NA	20973864	20974808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_20974195_20974284
ENSMUST00000126980.8	chr10	-	2449	9	FSM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_4	58.371118714652	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTATGTTGTCTGAGTG	NA	False	NA	1	True	AATAAA	-26	NA	80492328	80478450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ENSMUST00000126986.2	chr2	+	3346	2	FSM	ENSMUSG00000026977.18	ENSMUST00000126986.2	3346	2	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAGAAAAAAAAAAAAAGG	1383	False	NA	NA	False	NA	NA	NA	60073412	60078299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_60074015_60075555
ENSMUST00000126993.8	chr17	-	2332	12	FSM	ENSMUSG00000024008.17	ENSMUST00000126993.8	2332	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_8	10.8025096563731	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	8124	False	NA	-9	True	AGTAAA	-14	NA	29403077	29376889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896
ENSMUST00000127001.2	chr12	-	1033	3	FSM	ENSMUSG00000073164.12	ENSMUST00000127001.2	1033	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATGTGTATAGACTTAC	NA	False	NA	NA	False	NA	NA	NA	23060226	23042324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_23042850_23043051_23043179_23059845
ENSMUST00000127002.2	chr16	-	1415	8	FSM	ENSMUSG00000022974.13	ENSMUST00000127002.2	1415	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.0500442097061	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCTGCCAATTTTCT	NA	False	NA	NA	False	NA	NA	NA	90841242	90828451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90828478_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ENSMUST00000127010.2	chr7	+	4175	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	33933801	33939632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_33933921_33935576
ENSMUST00000127010.2-0	chr7	+	1666	2	FSM	ENSMUSG00000085105.3	ENSMUST00000127010.2	4175	2	0	2509	0	2146	multi-exon	FALSE	canonical	3	45	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTAAAATGGTTTAATG	NA	False	NA	NA	False	AATAAA	-21	NA	33933801	33937123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_33933921_33935576
ENSMUST00000127012.9	chrX	-	685	4	FSM	ENSMUSG00000031325.16	ENSMUST00000127012.9	685	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATCTAAGAAGCTACTAAA	NA	False	NA	NA	False	GATAAA	-14	NA	102355388	102273633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_102273781_102276407_102276548_102277627_102277876_102355238
ENSMUST00000127024.2	chrX	-	750	3	FSM	ENSMUSG00000032750.14	ENSMUST00000127024.2	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTTCAATGTTTTTG	2179	False	NA	NA	False	NA	NA	NA	74012731	74011387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74011592_74011767_74011897_74012314
ENSMUST00000127027.2	chr17	+	2667	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	31.9826341768293	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGGATGCAACATAGTTT	NA	False	NA	NA	False	NA	NA	NA	17284374	17309890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
ENSMUST00000127079.2	chr4	-	3345	7	FSM	ENSMUSG00000028833.14	ENSMUST00000127079.2	2375	7	11	-981	0	0	multi-exon	FALSE	canonical	3	56	junction_6	61.3969326052477	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTCTGCCTTGCAC	NA	False	NA	-1	True	NA	NA	NA	126647220	126637542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126647117
ENSMUST00000127082.8	chr7	-	4589	22	FSM	ENSMUSG00000039176.18	ENSMUST00000127082.8	4589	22	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_19	46.6152778280268	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115935	79099129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ENSMUST00000127084.8	chr2	-	1758	10	FSM	ENSMUSG00000027195.11	ENSMUST00000127084.8	1758	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	235.021879727436	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAATGAAAGTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	93988254	93863046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93947774_93947822_93988054
ENSMUST00000127106.8	chr7	-	1964	6	FSM	ENSMUSG00000035596.15	ENSMUST00000127106.8	1964	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.4218417653961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTTGTGAGTATA	8798	False	NA	-6	True	AATAAA	-11	NA	3695117	3680791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694804_3694935_3695038
ENSMUST00000127112.8	chr3	-	1983	5	FSM	ENSMUSG00000027752.16	ENSMUST00000127112.8	1983	5	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_4	239.481732079923	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGGAGATCTTAGGCT	NA	False	NA	NA	False	TATAAA	-12	NA	54642788	54638718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUST00000127208.8	chr15	+	2236	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	5	2608	0	0	multi-exon	FALSE	canonical	3	39	junction_1	34.1792659696229	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	76594842	76599291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
ENSMUST00000127210.8	chr7	-	1594	13	FSM	ENSMUSG00000054808.16	ENSMUST00000127210.8	1594	13	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_6	372.864614616798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGGGTGGCTCACC	NA	False	NA	NA	False	NA	NA	NA	28661648	28598044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUST00000127213.8	chr7	-	832	3	FSM	ENSMUSG00000030417.16	ENSMUST00000127213.8	832	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	889.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGACATAGCTTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	35346929	35343246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35343838_35345568_35345607_35346726
ENSMUST00000127228.2	chr14	+	810	3	FSM	ENSMUSG00000021737.5	ENSMUST00000127228.2	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	31.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCTCTATGAATGCC	NA	False	NA	NA	False	NA	NA	NA	8352410	8353568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_8352939_8353159_8353380_8353506
ENSMUST00000127234.8	chr18	+	1755	4	FSM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	451.424658411813	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGGGAATTCATTG	NA	False	NA	NA	False	AATAAA	-21	NA	80250109	80255956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80250277_80250368_80250559_80253276_80253346_80254627
ENSMUST00000127237.2	chr2	+	707	2	FSM	ENSMUSG00000086454.8	ENSMUST00000127237.2	707	2	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCGAAGTGAACCTGTTCA	NA	False	NA	NA	False	NA	NA	NA	104389803	104398395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_104390321_104398205
ENSMUST00000127239.8	chr16	+	2805	11	FSM	ENSMUSG00000022721.20	ENSMUST00000127239.8	2805	11	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_9	16.6400120192264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	65	False	NA	8	True	AATAAA	-22	NA	18066542	18071366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUST00000127243.8	chr2	-	1162	6	FSM	ENSMUSG00000005233.17	ENSMUST00000127243.8	1162	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	347.700215703125	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTAACTCTCTCTTC	NA	False	NA	-10	True	NA	NA	NA	69036501	69024238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69036407
ENSMUST00000127252.8	chr2	+	2314	17	FSM	ENSMUSG00000027642.16	ENSMUST00000127252.8	2314	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	580.610235953303	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121345	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157121444_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUST00000127263.8	chr11	-	1861	3	FSM	ENSMUSG00000087259.8	ENSMUST00000127263.8	1861	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGTCTTTTCTAAA	NA	False	NA	NA	False	TATAAA	-23	NA	113092664	112934720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_112935987_112958167_112958213_113092114
ENSMUST00000127270.2	chr11	-	588	4	FSM	ENSMUSG00000058546.9	ENSMUST00000127270.2	588	4	0	0	0	0	multi-exon	FALSE	canonical	3	10927	junction_1	3582.37128170713	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTCATTTGTCGC	6470	False	NA	-11	True	CATAAA	-4	NA	78073903	78071757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628
ENSMUST00000127288.8	chr5	-	3892	16	FSM	ENSMUSG00000036553.17	ENSMUST00000127288.8	3892	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	24.8118251377577	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35881290	35854524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35878873_35878949_35881257
ENSMUST00000127290.8	chr19	-	2753	5	FSM	ENSMUSG00000074733.15	ENSMUST00000127290.8	2753	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5051015096857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTTTGGTCATGGTG	NA	False	NA	-4	True	NA	NA	NA	61129278	61103421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_61105727_61106664_61106789_61115444_61115506_61115875_61116003_61129142
ENSMUST00000127309.8	chr2	-	2123	10	FSM	ENSMUSG00000039660.17	ENSMUST00000127309.8	2123	10	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_5	42.729409885181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTCACCTATGCTCACGT	NA	False	NA	-10	True	AATAAA	-33	NA	30068454	30063464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067978_30068401
ENSMUST00000127324.2	chr4	+	363	2	FSM	ENSMUSG00000028461.13	ENSMUST00000127324.2	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCTACAGTACCAAGAACAA	-11	True	NA	NA	False	NA	NA	NA	43493376	43493810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43493537_43493607
ENSMUST00000127348.8	chr3	+	1997	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	8	1464	0	0	multi-exon	FALSE	canonical	3	140	junction_6	19.0283049399806	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGATGCCGTGGGTGC	NA	False	NA	9	True	AATAAA	-13	NA	85481433	85561465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUST00000127350.2	chr2	+	536	3	FSM	ENSMUSG00000086454.8	ENSMUST00000127350.2	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	238	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAGCATGAAGAATTAG	NA	False	NA	NA	False	NA	NA	NA	104389536	104398474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_104389552_104390068_104390321_104398205
ENSMUST00000127369.2	chr11	+	681	2	FSM	ENSMUSG00000020808.4	ENSMUST00000127369.2	681	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGATCACTCAGGAAAGGG	NA	False	NA	NA	False	GATAAA	-26	NA	71933327	71934490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_71933361_71933842
ENSMUST00000127382.2	chr11	+	1502	4	FSM	ENSMUSG00000020328.11	ENSMUST00000127382.2	727	4	-279	-496	0	0	multi-exon	FALSE	canonical	3	70	junction_2	523.696052644619	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624493	40630873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_40624982_40626844_40626894_40627394_40627472_40629985
ENSMUST00000127401.8	chr7	+	2807	8	FSM	ENSMUSG00000001918.18	ENSMUST00000127401.8	2807	8	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_5	120.463052172753	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515292	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
ENSMUST00000127404.8	chrX	-	539	4	FSM	ENSMUSG00000072955.15	ENSMUST00000127404.8	816	4	0	277	0	-277	multi-exon	FALSE	canonical	3	70	junction_2	61.5918465022405	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTAACTTCCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	135877618	135856013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135856232_135857483_135857589_135876146_135876252_135877507
ENSMUST00000127405.2	chr11	+	1042	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCAGTTCTAACGGGT	NA	False	NA	NA	False	TATAAA	-3	NA	51510561	51514541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ENSMUST00000127405.2-0	chr11	+	721	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	36	285	0	0	multi-exon	FALSE	canonical	3	5273	junction_1	70.8723421998235	1455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGGCAAGTGTGTGG	NA	False	NA	16	True	AGTAAA	-11	NA	51510597	51514256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ENSMUST00000127417.3	chr4	-	6796	50	FSM	ENSMUSG00000028556.16	ENSMUST00000127417.3	6796	50	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	35.7692172306178	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATGAGTGGGATTTTA	NA	False	NA	-4	True	ATTAAA	-21	NA	99008999	98825091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98834992_98842102_98842118_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98881883_98881974_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ENSMUST00000127423.3	chr17	-	1267	9	FSM	ENSMUSG00000024012.19	ENSMUST00000127423.3	1267	9	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_4	172.979767603035	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGACTTCTGTGCAAG	NA	False	NA	-17	True	AATAAA	-13	NA	29559510	29551057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394
ENSMUST00000127430.2	chr17	-	7052	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_42	32.1184571856639	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71782338	71651483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ENSMUST00000127477.8	chr3	+	1079	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTGCTTTACTTTTGG	NA	False	NA	10	True	AATAAA	-24	NA	32791138	32805715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUST00000127477.8-0	chr3	+	662	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	81	336	0	0	multi-exon	FALSE	canonical	3	2813	junction_1	66.9226419084005	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATTCTGTGGCTGG	NA	False	NA	23	True	AATAAA	-25	NA	32791219	32805379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUST00000127492.2	chr7	+	4920	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	24	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTCTTGATCGTATTT	NA	False	NA	6	True	AATAAA	-16	NA	98916695	98969559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_98918521_98964895_98965110_98966678
ENSMUST00000127503.2	chr6	-	2277	7	FSM	ENSMUSG00000000441.18	ENSMUST00000127503.2	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_3	87.1080108575299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCAAATAAAAAAGACT	8144	False	NA	NA	False	AAAAAG	-5	NA	115653596	115607158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ENSMUST00000127505.8	chr8	+	1927	11	FSM	ENSMUSG00000005481.19	ENSMUST00000127505.8	1927	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	947.235852362019	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCATGGCTCCAGCCCC	NA	False	NA	25	True	AATAAA	-11	NA	84441896	84449903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUST00000127540.2	chr2	-	2331	5	FSM	ENSMUSG00000026646.17	ENSMUST00000127540.2	2331	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	64.4995155020563	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGAAAAAACTTACTT	NA	False	NA	-33	True	AGTAAA	-5	NA	3476006	3458639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3475739
ENSMUST00000127545.2	chr2	-	916	3	FSM	ENSMUSG00000039804.16	ENSMUST00000127545.2	916	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	63.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGTAGCTAAAGGTAAGA	3046	False	NA	NA	False	NA	NA	NA	164876723	164852039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164852508_164854755_164855083_164876602
ENSMUST00000127569.8-1	chr9	-	3904	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	106	1597	0	0	multi-exon	FALSE	canonical	3	110	junction_11	15.624418356521	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGGTTGAGTGTCGT	NA	False	NA	NA	False	ATTAAA	-15	NA	66500318	66423515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ENSMUST00000127587.8	chr11	+	1412	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTCTTAATTGCTCAGA	NA	False	NA	52	True	NA	NA	NA	78069510	78071646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ENSMUST00000127587.8-0	chr11	+	1026	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	46	340	0	0	multi-exon	FALSE	canonical	3	157	junction_1	14.2672897060218	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCTGAAGTCCTGTTC	NA	False	NA	NA	False	AATGAA	-1	NA	78069556	78071306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ENSMUST00000127608.8	chr5	+	1608	7	FSM	ENSMUSG00000029464.11	ENSMUST00000127608.8	2198	7	651	-61	0	0	multi-exon	FALSE	canonical	3	424	junction_4	30.9861079984061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8115	False	NA	NA	False	AATAAA	-42	NA	122510589	122520965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519558_122520110_122520240_122520323
ENSMUST00000127617.2	chrX	-	1166	3	FSM	ENSMUSG00000039231.19	ENSMUST00000127617.2	1166	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	20	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGACCTCTGGTTTCA	7300	False	NA	NA	False	NA	NA	NA	7940552	7936667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7937490_7938561_7938708_7940354
ENSMUST00000127625.3	chr1	+	1167	5	FSM	ENSMUSG00000026199.18	ENSMUST00000127625.3	1167	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	48.7307654362211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTTGGTTTCTTGTT	76	False	NA	NA	False	NA	NA	NA	75168835	75172178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171937_75171937
ENSMUST00000127628.6	chr5	-	1481	7	FSM	ENSMUSG00000033434.16	ENSMUST00000127628.6	1481	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	14.1234635349203	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCGGCCTGGTTTTGTAT	NA	False	NA	-8	True	ATTAAA	-24	NA	110255068	110251844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518
ENSMUST00000127638.8	chr11	-	4516	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	54.0525544164325	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830366	100777635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUST00000127645.2	chr4	-	657	4	FSM	ENSMUSG00000028455.16	ENSMUST00000127645.2	657	4	0	0	0	0	multi-exon	FALSE	canonical	3	2899	junction_1	49.1008033426021	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGGCTGGAGTAAGGGC	8941	False	NA	NA	False	NA	NA	NA	43031358	43030040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43030151_43030239_43030299_43030435_43030536_43030970
ENSMUST00000127647.3	chr17	+	1002	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	671.536670629386	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342517	26345587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
ENSMUST00000127659.2	chr4	+	732	2	FSM	ENSMUSG00000028936.16	ENSMUST00000127659.2	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	5802	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGAGTAGTGTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	152411582	152414732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152412043_152414460
ENSMUST00000127687.8	chr2	+	1127	3	FSM	ENSMUSG00000089951.9	ENSMUST00000127687.8	1127	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	45	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTCTTCCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	176115453	176124879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_176115528_176123621_176123749_176123953
ENSMUST00000127689.8	chr2	+	1183	10	FSM	ENSMUSG00000079484.13	ENSMUST00000127689.8	1183	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.1837690233655	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGATGTTACTGTGTA	NA	False	NA	NA	False	NA	NA	NA	30156874	30172110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUST00000127698.8	chr10	-	2873	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	20.3367483471014	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGTATTCCCCCT	NA	False	NA	-7	True	AATAAA	-21	NA	22607346	22579777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ENSMUST00000127728.4	chr6	-	894	8	FSM	ENSMUSG00000059900.15	ENSMUST00000127728.4	894	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	23.8772370466013	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGTCGACTA	NA	False	NA	NA	False	AATAAA	-18	NA	115711912	115706103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115706646_115707396_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115710989_115711770_115711807_115711887
ENSMUST00000127737.2	chr4	-	1054	5	FSM	ENSMUSG00000028639.15	ENSMUST00000127737.2	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	4449.11772152637	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	False	NA	NA	False	AATAAA	-7	NA	119139989	119135186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342_119139646_119139977
ENSMUST00000127741.2	chr8	+	2392	9	FSM	ENSMUSG00000007610.16	ENSMUST00000127741.2	2392	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.9892554073694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTTTCCCTCGAACT	NA	False	NA	139	True	NA	NA	NA	71941394	71946044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943298_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ENSMUST00000127833.3	chr4	+	3882	29	FSM	ENSMUSG00000036622.16	ENSMUST00000127833.3	3882	29	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_19	21.6883068279021	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1402	False	NA	12	True	AATAAA	-17	NA	140714183	140734641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
ENSMUST00000127864.2	chr3	-	522	2	FSM	ENSMUSG00000028010.17	ENSMUST00000127864.2	522	2	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGTGAGTGTGACCAGAG	NA	False	NA	NA	False	NA	NA	NA	129620929	129619200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_129619266_129620472
ENSMUST00000127878.2	chr19	+	1026	3	FSM	ENSMUSG00000036372.15	ENSMUST00000127878.2	1026	3	0	0	0	0	multi-exon	FALSE	canonical	3	2797	junction_1	181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4181	False	NA	27	True	AATAAA	-16	NA	10181581	10185182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10181629_10183787_10184665_10185080
ENSMUST00000127884.2	chr1	+	3400	4	FSM	ENSMUSG00000026289.16	ENSMUST00000127884.2	3400	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	7.78888096369861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAGACATAACAACGAAAT	3831	False	NA	NA	False	NA	NA	NA	87706179	87716284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87706750_87707846_87707918_87709392_87709465_87713597
ENSMUST00000127896.8	chr9	+	575	5	FSM	ENSMUSG00000036781.14	ENSMUST00000127896.8	575	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	5596.89320069626	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCCTCCCTCTGCTTCT	NA	False	NA	32	True	AATAAA	-16	NA	66853372	66856796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66856000_66856610
ENSMUST00000127904.8	chr8	-	2355	24	FSM	ENSMUSG00000032815.17	ENSMUST00000127904.8	2355	24	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	12.8286659161093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCACACGTGTGGATGA	NA	False	NA	NA	False	NA	NA	NA	124040101	124013142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978
ENSMUST00000127921.2	chr1	-	5020	8	FSM	ENSMUSG00000026135.18	ENSMUST00000127921.2	5020	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	18.5999780557255	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTCTGGTGTAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	74624822	74606027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74618566_74624542
ENSMUST00000127929.8	chr17	+	1891	19	FSM	ENSMUSG00000041119.13	ENSMUST00000127929.8	1891	19	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_18	14.1770114735436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGTATTTTTTTTCT	NA	False	NA	NA	False	AATATA	-15	NA	31605227	31695133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692254_31694901
ENSMUST00000127939.2	chr2	+	1985	5	FSM	ENSMUSG00000006418.18	ENSMUST00000127939.2	1985	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	262.348051260153	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345365	167358084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167345522_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUST00000127944.9	chr2	+	4083	5	FSM	ENSMUSG00000061689.16	ENSMUST00000127944.9	4083	5	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	85.3591676388658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGCGTTTCTCACCC	NA	False	NA	11	True	ATTAAA	-14	NA	156562965	156604875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156563008_156587754_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUST00000127962.2	chr4	-	468	3	FSM	ENSMUSG00000058579.6	ENSMUST00000127962.2	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	12.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGAATGAGTCTGTCTT	535	False	NA	-2	True	AATAAA	-18	NA	141546513	141542272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141542367_141545175_141545329_141546292
ENSMUST00000127974.8	chr12	-	4423	19	FSM	ENSMUSG00000052593.17	ENSMUST00000127974.8	4423	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	36.8288081684856	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATGATACGAGCCA	NA	False	NA	NA	False	AATAAA	-36	NA	21423594	21373517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397451_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUST00000127974.8-0	chr12	-	4168	19	FSM	ENSMUSG00000052593.17	ENSMUST00000127974.8	4423	19	-39	294	0	0	multi-exon	FALSE	canonical	2	4	junction_14	36.8288081684856	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATTGTCTTAATTGTAT	NA	False	NA	-7	True	TATAAA	-18	NA	21423633	21373811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397451_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUST00000127988.8	chr2	-	2447	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGTTAGCCAGTCACA	6076	False	NA	30	True	AATAAA	-14	NA	181007197	180999625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUST00000127988.8-0	chr2	-	1737	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	43	667	0	600	multi-exon	FALSE	canonical	3	258	junction_2	23.8627025172878	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTTCAATCAGTTAGAT	6119	False	NA	-16	True	AATAAA	-17	NA	181007154	181000292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUST00000127993.2	chrX	+	646	2	FSM	ENSMUSG00000000838.18	ENSMUST00000127993.2	646	2	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACCTAGTTTCCATCT	NA	False	NA	NA	False	NA	NA	NA	67755456	67756929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67756020_67756846
ENSMUST00000127999.2	chr15	-	3038	2	FSM	ENSMUSG00000014313.16	ENSMUST00000127999.2	3038	2	0	0	0	0	multi-exon	FALSE	canonical	3	8821	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTAAGTCTTTGCTTGGT	NA	False	NA	-8	True	AATAAA	-15	NA	35938353	35932128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_35932244_35935430
ENSMUST00000128003.8	chr8	+	837	7	FSM	ENSMUSG00000055681.15	ENSMUST00000128003.8	837	7	0	0	0	0	multi-exon	FALSE	canonical	3	1246	junction_1	49.614066105849	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCCTGATACCCACCA	86	False	NA	26	True	AATAAA	-15	NA	70758347	70765640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
ENSMUST00000128025.2	chr5	+	827	3	FSM	ENSMUSG00000067365.12	ENSMUST00000128025.2	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACAAGACTGTAGAGA	NA	False	NA	NA	False	CATAAA	-24	NA	38417730	38422734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_38417837_38419340_38419483_38422155
ENSMUST00000128028.2	chr8	-	854	3	FSM	ENSMUSG00000003814.9	ENSMUST00000128028.2	854	3	0	0	0	0	multi-exon	FALSE	canonical	3	1106	junction_2	108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGTAATCGTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	85573459	85572065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85572695_85572878_85572981_85573336
ENSMUST00000128035.2	chr8	-	1068	9	FSM	ENSMUSG00000003813.16	ENSMUST00000128035.2	1068	9	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	454.887279993627	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAGAATTTGGCT	NA	False	NA	NA	False	NA	NA	NA	85567294	85562248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85562304_85562448_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUST00000128039.2	chr2	+	655	3	FSM	ENSMUSG00000026810.13	ENSMUST00000128039.2	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGCTTACAAGATGGTC	4782	False	NA	NA	False	NA	NA	NA	32460878	32463093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32461308_32462308_32462412_32462970
ENSMUST00000128052.8	chr8	-	2415	8	FSM	ENSMUSG00000031816.16	ENSMUST00000128052.8	2415	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	31.0733168555943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTATGTTTGTGTA	NA	False	NA	-9	True	NA	NA	NA	121835034	121824293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831298_121832312_121832427_121833608_121833713_121834932
ENSMUST00000128078.2	chr11	-	581	2	FSM	ENSMUSG00000085152.2	ENSMUST00000128078.2	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCCAGAGTTCAAATCCC	9039	False	NA	NA	False	NA	NA	NA	88887370	88883865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_88884304_88887227
ENSMUST00000128081.8	chr8	+	4707	8	FSM	ENSMUSG00000055932.16	ENSMUST00000128081.8	4707	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_7	44.6025532352358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	NA	False	NA	NA	False	AATGAA	-11	NA	92040185	92252858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399
ENSMUST00000128119.2	chr7	+	10040	41	FSM	ENSMUSG00000045039.10	ENSMUST00000128119.2	10040	41	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_9	8.91613705592282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATCGTAACTTCATCTG	NA	False	NA	11	True	AATAAA	-16	NA	25016588	25065342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_25017119_25025804_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ENSMUST00000128122.9	chr4	-	1330	11	FSM	ENSMUSG00000028677.20	ENSMUST00000128122.9	1330	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	401.226232940968	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAAATGGGACACTTT	9186	False	NA	-38	True	AATATA	-23	NA	117147027	117129150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146920
ENSMUST00000128127.8	chr3	+	3050	21	FSM	ENSMUSG00000002428.13	ENSMUST00000128127.8	3050	21	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	29.2172466190776	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6947	False	NA	NA	False	NA	NA	NA	20111983	20162685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161
ENSMUST00000128136.8	chrX	-	3480	10	FSM	ENSMUSG00000031386.15	ENSMUST00000128136.8	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	130.872287194637	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	72992859	72986400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72991893_72992507_72992672_72992803
ENSMUST00000128140.2	chr2	+	372	2	FSM	ENSMUSG00000027243.9	ENSMUST00000128140.2	372	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATACTTCTTAGTGGA	3372	False	NA	NA	False	NA	NA	NA	91541196	91542672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91541321_91542424
ENSMUST00000128157.2	chr7	+	3823	3	FSM	ENSMUSG00000041769.14	ENSMUST00000128157.2	3823	3	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGATGTAATAAAAAG	NA	False	NA	NA	False	NA	NA	NA	138447807	138473431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_138448245_138448340_138448434_138470138
ENSMUST00000128187.8	chr5	-	2752	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100187081	100181435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUST00000128187.8-0	chr5	-	1281	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	327	1144	0	0	multi-exon	FALSE	canonical	3	572	junction_1	185.830183616271	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186754	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUST00000128188.8	chr4	-	1826	4	FSM	ENSMUSG00000042558.17	ENSMUST00000128188.8	1826	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	27.3901847788988	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCATGTCCTGTTCCT	7312	False	NA	NA	False	AATAAA	-15	NA	126215260	126209844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126210659_126211095_126211985_126212191_126212289_126215234
ENSMUST00000128201.2	chr8	+	1535	7	FSM	ENSMUSG00000060098.12	ENSMUST00000128201.2	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	1023	junction_6	42.8501912351496	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAATACTATATTTTAC	3409	False	NA	NA	False	AATAAA	-19	NA	106939157	106964691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853
ENSMUST00000128243.2	chr2	-	1008	2	FSM	ENSMUSG00000027620.17	ENSMUST00000128243.2	1008	2	0	0	0	0	multi-exon	FALSE	canonical	3	2349	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAGGAAAAAAAACC	NA	False	NA	-32	True	AATAGA	-8	NA	156022132	156020478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156021161_156021806
ENSMUST00000128253.2	chr1	-	349	2	FSM	ENSMUSG00000026274.12	ENSMUST00000128253.2	349	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTACCTTTGAGCCCA	NA	False	NA	NA	False	NA	NA	NA	93271204	93265170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93265303_93270987
ENSMUST00000128275.2	chr1	+	3158	12	FSM	ENSMUSG00000026604.18	ENSMUST00000128275.2	3158	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.42415777824593	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATTGTTGGATTGTAG	NA	False	NA	2	True	AATAAA	-15	NA	189518832	189584173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220
ENSMUST00000128278.8	chr10	-	1855	11	FSM	ENSMUSG00000034758.13	ENSMUST00000128278.8	1855	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	22.2937210891318	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81433424	81426737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433293
ENSMUST00000128279.2	chr13	-	751	2	FSM	ENSMUSG00000041431.17	ENSMUST00000128279.2	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGCTAAAGGACGGTGG	NA	False	NA	NA	False	NA	NA	NA	100922111	100919551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100920156_100921964
ENSMUST00000128285.2	chr16	+	3527	5	FSM	ENSMUSG00000022797.17	ENSMUST00000128285.2	3527	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	13.3111795119741	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	NA	False	NA	14	True	AATAAA	-15	NA	32443259	32451608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ENSMUST00000128287.2	chr4	+	647	3	FSM	ENSMUSG00000028811.13	ENSMUST00000128287.2	647	3	0	0	0	0	multi-exon	FALSE	canonical	3	1802	junction_1	30	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAAATATACTGGCTC	855	False	NA	NA	False	ATTAAA	-32	NA	129083694	129091234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129083866_129090622_129090770_129090905
ENSMUST00000128302.8	chr1	-	1588	12	FSM	ENSMUSG00000055067.16	ENSMUST00000128302.8	6871	12	-7	5290	0	0	multi-exon	FALSE	canonical	3	343	junction_1	34.6080772113168	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCGACTTGGCTTTGCCT	NA	False	NA	-5	True	AATAAA	-26	NA	179345606	178784814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ENSMUST00000128309.8	chr5	+	2492	6	FSM	ENSMUSG00000004455.17	ENSMUST00000128309.8	2492	6	0	0	0	0	multi-exon	FALSE	canonical	3	2504	junction_1	193.218425622403	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296418	122313332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117
ENSMUST00000128318.8	chr3	+	1885	12	FSM	ENSMUSG00000068917.13	ENSMUST00000128318.8	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	144.088987655672	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072285	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ENSMUST00000128372.8	chr11	-	2802	9	FSM	ENSMUSG00000020288.14	ENSMUST00000128372.8	2802	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	87.0171498901222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGCACTGAAATCCTAT	NA	False	NA	NA	False	AATAAA	-13	NA	23447538	23438548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447501
ENSMUST00000128381.8	chr4	-	2302	15	FSM	ENSMUSG00000038047.19	ENSMUST00000128381.8	2302	15	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_12	19.1012340663409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTAAAAAAAAAATTCTGG	NA	False	NA	NA	False	NA	NA	NA	86530292	86503263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ENSMUST00000128383.8	chr8	-	6317	40	FSM	ENSMUSG00000014444.18	ENSMUST00000128383.8	6317	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	28.2295698294318	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGGCCCTGGGCACC	9593	False	NA	NA	False	NA	NA	NA	123226624	123208720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216356_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366
ENSMUST00000128402.3	chr12	+	6918	16	FSM	ENSMUSG00000021294.8	ENSMUST00000128402.3	6918	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	3.04776785350999	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTTCTGACTTTCCGGG	2026	False	NA	10	True	AATAAA	-19	NA	112112641	112148181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112112841_112113147_112113391_112123681_112124108_112129784_112129976_112135201_112135392_112139004_112139218_112139774_112139869_112140171_112140435_112140534_112140719_112140868_112141032_112141207_112141371_112141919_112144834_112145576_112145783_112145913_112145935_112146228_112146380_112146884
ENSMUST00000128406.8	chr2	+	2724	7	FSM	ENSMUSG00000028640.12	ENSMUST00000128406.8	2724	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	241.022589997056	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAATCTCTGAAAGTCTG	NA	False	NA	10	True	AATAAA	-12	NA	172392572	172400527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172392764_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ENSMUST00000128457.2	chr4	+	630	2	FSM	ENSMUSG00000047613.11	ENSMUST00000128457.2	630	2	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGAACATAATTGATCAT	NA	False	NA	NA	False	NA	NA	NA	154044248	154045546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154044320_154044987
ENSMUST00000128467.4	chr2	-	772	6	FSM	ENSMUSG00000039128.14	ENSMUST00000128467.4	772	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	388.054326093654	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCATCATTGCTTTTTA	6462	False	NA	2	True	AATACA	-18	NA	5838489	5814365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466
ENSMUST00000128486.8	chr7	+	1419	5	FSM	ENSMUSG00000053091.17	ENSMUST00000128486.8	1419	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	17.682972035266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAATGAAAACTTA	NA	False	NA	NA	False	NA	NA	NA	66339696	66359650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041
ENSMUST00000128490.9	chr14	+	2660	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	16.6800735031656	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTCTGTGTCACTT	NA	False	NA	13	True	AATAAA	-18	NA	55798427	55807521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000128519.8	chr11	-	1845	10	FSM	ENSMUSG00000059796.17	ENSMUST00000128519.8	1845	10	0	0	0	0	multi-exon	TRUE	canonical	3	9657	junction_9	1461.90417007037	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGCTTCTTGTTTCTT	NA	False	NA	64	True	AATAAA	-19	NA	69563143	69557761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUST00000128526.2	chr6	+	890	2	FSM	ENSMUSG00000044155.12	ENSMUST00000128526.2	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	968	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAAAGACTAAATGCA	6	True	NA	NA	False	NA	NA	NA	18848654	18850406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_18848763_18849624
ENSMUST00000128543.2	chr11	-	758	3	FSM	ENSMUSG00000025144.18	ENSMUST00000128543.2	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	441.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120602809	120601767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120602133_120602215_120602328_120602528
ENSMUST00000128548.2	chr4	-	1654	3	FSM	ENSMUSG00000038544.15	ENSMUST00000128548.2	1654	3	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	17	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTTATATAATTATTTT	0	True	NA	NA	False	AATAAA	-20	NA	59783838	59774087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59775550_59782253_59782335_59783727
ENSMUST00000128553.8	chr2	-	5357	15	FSM	ENSMUSG00000000823.17	ENSMUST00000128553.8	5357	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	11.5053226369186	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTTTGTGTGGCTGAGT	9321	False	NA	-3	True	AATAAA	-24	NA	181232713	181223897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652
ENSMUST00000128557.3	chr8	+	3977	2	FSM	ENSMUSG00000047710.9	ENSMUST00000128557.3	3977	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTACTTAATTT	NA	False	NA	17	True	ATTAAA	-19	NA	13919703	13931639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13919839_13927797
ENSMUST00000128559.2	chr11	-	638	4	FSM	ENSMUSG00000020288.14	ENSMUST00000128559.2	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	31.2089730686545	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGTTAAAAGCTAGTTG	NA	False	NA	NA	False	NA	NA	NA	23447895	23443153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUST00000128571.2	chrX	-	540	2	FSM	ENSMUSG00000063018.7	ENSMUST00000128571.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTGTGGCTTATTAT	NA	False	NA	-28	True	NA	NA	NA	7289227	7278341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7278772_7289117
ENSMUST00000128580.8	chr16	-	1495	8	FSM	ENSMUSG00000013539.15	ENSMUST00000128580.8	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	80.7568787744286	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTGGCTTTTTCTAA	NA	False	NA	-4	True	AATAAA	-16	NA	18142314	18118688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18119417_18120549_18120655_18121546_18121720_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220
ENSMUST00000128585.9	chr13	-	2580	9	FSM	ENSMUSG00000069170.15	ENSMUST00000128585.9	2580	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.4172259381876	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAACCCCACACAA	2372	False	NA	NA	False	NA	NA	NA	81781258	81725554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_81726512_81726838_81727116_81727403_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
ENSMUST00000128597.3	chr17	+	2433	12	FSM	ENSMUSG00000024180.15	ENSMUST00000128597.3	2433	12	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_6	43.3616351739493	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGGCTTCTTTCTCCAG	NA	False	NA	12	True	AATAAA	-13	NA	26335604	26341321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ENSMUST00000128616.6	chr6	+	2819	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATTTTGCTTTTAACT	295	False	NA	NA	False	TATAAA	-23	NA	49050728	49063685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ENSMUST00000128616.6-0	chr6	+	693	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	53	2073	0	0	multi-exon	FALSE	canonical	3	781	junction_1	29.2232783924049	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGTAAATAAACAAAGTT	348	False	NA	-21	True	NA	NA	NA	49050781	49061612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ENSMUST00000128620.2	chr8	-	781	2	FSM	ENSMUSG00000058833.12	ENSMUST00000128620.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGAAGCAGAGTTGGCA	NA	False	NA	NA	False	NA	NA	NA	70959363	70958500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70959230_70959311
ENSMUST00000128645.2	chr2	-	1595	2	FSM	ENSMUSG00000027466.16	ENSMUST00000128645.2	1595	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAGAAAGACTAGGC	NA	False	NA	NA	False	NA	NA	NA	152166536	152164857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152166361_152166444
ENSMUST00000128650.8	chr11	-	1952	11	FSM	ENSMUSG00000020937.15	ENSMUST00000128650.8	1952	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	9.49947366963033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTACCTTTCCACT	NA	False	NA	NA	False	AGTAAA	-2	NA	102969120	102961129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968691_102969064
ENSMUST00000128667.8	chr4	+	6080	10	FSM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	6.81501610008696	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTGTTTGTTTTTGA	1326	False	NA	5	True	AATAAA	-18	NA	53713997	53765785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ENSMUST00000128679.2	chr18	+	335	2	FSM	ENSMUSG00000090000.3	ENSMUST00000128679.2	335	2	0	0	0	0	multi-exon	FALSE	canonical	3	1797	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTCTTTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	77017758	77027444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77017913_77027263
ENSMUST00000128682.9	chr2	+	6896	6	FSM	ENSMUSG00000017418.15	ENSMUST00000128682.9	1035	6	0	-5861	0	0	multi-exon	FALSE	canonical	3	15	junction_2	39.1989795785554	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTAGCCTGTGTTTTCTTT	4705	False	NA	16	True	AATAAA	-18	NA	15060097	15087267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_15060386_15072949_15073011_15074668_15074779_15077934_15078019_15079772_15079925_15081066
ENSMUST00000128694.8	chr19	+	2683	13	FSM	ENSMUSG00000024843.16	ENSMUST00000128694.8	2683	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	76.2468123195251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCAGACTGTTACCCT	5720	False	NA	2	True	AATAAA	-13	NA	3901772	3944365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ENSMUST00000128715.8	chr8	-	3463	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	42.7701912106826	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAACTTTTGTGTGTTT	9833	False	NA	20	True	NA	NA	NA	25592001	25530855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ENSMUST00000128727.8	chr5	+	2031	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	35.2080956599473	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	10	True	AATAAA	-18	NA	25964994	26055686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ENSMUST00000128758.9	chr17	+	936	3	FSM	ENSMUSG00000037805.16	ENSMUST00000128758.9	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	5715	junction_1	1608.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCACTGTGAGCTAGGCA	NA	False	NA	NA	False	NA	NA	NA	28547556	28548765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28547593_28547784_28547860_28547940
ENSMUST00000128762.9	chr7	+	793	3	FSM	ENSMUSG00000037706.18	ENSMUST00000128762.9	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	6345	junction_1	159	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATGTAGGATAAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	142606530	142619350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_142606804_142616229_142616345_142618945
ENSMUST00000128787.8	chr19	-	1436	10	FSM	ENSMUSG00000037916.15	ENSMUST00000128787.8	1436	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	454.671065472367	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTCTCATCCCTTTGG	6559	False	NA	-62	True	NA	NA	NA	4062673	4057561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062577
ENSMUST00000128788.8	chr11	+	1141	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	100.921751867474	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGTGTGCATTATTT	NA	False	NA	24	True	AATAAA	-33	NA	78427186	78432563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUST00000128789.2	chr3	+	531	2	FSM	ENSMUSG00000038298.15	ENSMUST00000128789.2	531	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGTGACAGGGTGCTCAG	NA	False	NA	NA	False	GGGGCT	-5	NA	96740541	96757695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96740921_96757543
ENSMUST00000128795.2	chr9	-	514	2	FSM	ENSMUSG00000032498.10	ENSMUST00000128795.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGAGTCGACCCTCTC	2808	False	NA	NA	False	AGTAAA	-40	NA	111060016	111058937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_111059404_111059968
ENSMUST00000128822.2	chr8	+	2429	2	FSM	ENSMUSG00000055681.15	ENSMUST00000128822.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	3	1353	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCAAG	727	False	NA	NA	False	TTTAAA	-8	NA	70755442	70759572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70755583_70757283
ENSMUST00000128847.2	chrX	+	2329	2	FSM	ENSMUSG00000072969.3	ENSMUST00000128847.2	2329	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGATAAGA	NA	False	NA	NA	False	NA	NA	NA	134643483	134646155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134645325_134645667
ENSMUST00000128880.8	chr9	-	4776	19	FSM	ENSMUSG00000036737.13	ENSMUST00000128880.8	2433	19	-105	-2238	0	0	multi-exon	FALSE	canonical	3	9	junction_15	88.2525136913363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTTATTTATTTA	5572	False	NA	47	True	AATAAA	-29	NA	119151493	119067497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119119802_119119932_119123480_119123590_119133870_119133984_119151070
ENSMUST00000128901.9	chr7	+	4380	24	FSM	ENSMUSG00000039990.17	ENSMUST00000128901.9	4380	24	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	37.3605535837356	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGGTAGTTCCCACTT	NA	False	NA	6	True	AATAAA	-19	NA	133239421	133273908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ENSMUST00000128920.2	chr5	-	624	4	FSM	ENSMUSG00000029388.15	ENSMUST00000128920.2	624	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	338.792955456082	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGACGGGGCGGTGAGTA	NA	False	NA	NA	False	NA	NA	NA	124717055	124714873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124714978_124715078_124715216_124716499_124716602_124716774
ENSMUST00000128940.2	chr11	+	1196	2	FSM	ENSMUSG00000020397.16	ENSMUST00000128940.2	702	2	-17	-477	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATTGTCATTCTTGGA	NA	False	NA	12	True	AATAAA	-14	NA	46327787	46332354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_46328019_46331389
ENSMUST00000128955.2	chr9	-	325	2	FSM	ENSMUSG00000051234.7	ENSMUST00000128955.2	325	2	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGCTGTGGTAACCCAGG	3800	False	NA	NA	False	ATTAAA	-15	NA	96360641	96355914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_96356059_96360460
ENSMUST00000128957.9	chr1	-	3162	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	-60	805	0	0	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGATTCATATAGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	16589531	16414514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
ENSMUST00000128957.9-1	chr1	-	3176	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	19	712	0	0	multi-exon	FALSE	canonical	3	38	junction_10	22.8368268627019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACTGCTCATTTATAAA	NA	False	NA	NA	False	AATAAA	-16	NA	16589452	16414421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
ENSMUST00000128960.2	chr11	+	4423	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGCATGATACGATGTA	NA	False	NA	NA	False	AATAAA	-17	NA	86092195	86102018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_86092379_86097778
ENSMUST00000128960.2-0	chr11	+	2765	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	13	1645	0	-1645	multi-exon	FALSE	canonical	3	24	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCGTCTCTGTTTCTGTG	NA	False	NA	9	True	NA	NA	NA	86092208	86100373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_86092379_86097778
ENSMUST00000128967.2	chr5	-	494	2	FSM	ENSMUSG00000047881.15	ENSMUST00000128967.2	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCACGGCGACAAGGCGAG	5422	False	NA	NA	False	CATAAA	-27	NA	64088120	64084374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_64084569_64087820
ENSMUST00000128968.8	chrX	-	3233	8	FSM	ENSMUSG00000031229.17	ENSMUST00000128968.8	3233	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	94.231802768817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAGGAAGAATTATCT	NA	False	NA	NA	False	GATAAA	-8	NA	104972972	104918735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ENSMUST00000128972.9	chr8	-	1141	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	0	0	0	0	multi-exon	FALSE	canonical	3	1021	junction_4	88.9793983646402	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8230	False	NA	-8	True	AATAAA	-14	NA	85692693	85684295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUST00000129002.8	chr3	-	2229	12	FSM	ENSMUSG00000027829.16	ENSMUST00000129002.8	2229	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	57.4382888393569	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865583	65853571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
ENSMUST00000129013.2	chr5	-	251	2	FSM	ENSMUSG00000005378.18	ENSMUST00000129013.2	251	2	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTACATGCAGTTCTGC	NA	False	NA	NA	False	NA	NA	NA	135092933	135092590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135092776_135092867
ENSMUST00000129021.9	chr4	-	1378	8	FSM	ENSMUSG00000028411.16	ENSMUST00000129021.9	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	41.4453168128111	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTGGATTGTGTAGTAT	21	False	NA	-8	True	AATATA	-17	NA	40703187	40686241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216_40697354_40703136
ENSMUST00000129032.8	chr4	-	3323	7	FSM	ENSMUSG00000040606.15	ENSMUST00000129032.8	3323	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.6232479868549	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAATTCTATGTGATT	NA	False	NA	-6	True	AATAAA	-16	NA	141937419	141866553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141869108_141870604_141870656_141874333_141874460_141878156_141878347_141881740_141881912_141886354_141886492_141937325
ENSMUST00000129043.8	chr18	+	1864	5	FSM	ENSMUSG00000034006.18	ENSMUST00000129043.8	1864	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	11.0989864402116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTCATGTGGTGTAAG	NA	False	NA	6	True	AATAAA	-39	NA	80299498	80335931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80299534_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUST00000129054.8	chr11	-	1398	4	FSM	ENSMUSG00000041231.16	ENSMUST00000129054.8	1398	4	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	11.8602979164381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTATCTGTTTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	44351657	44345399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547
ENSMUST00000129078.2	chr6	-	536	2	FSM	ENSMUSG00000030216.13	ENSMUST00000129078.2	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGTTAGAATGACTTG	4970	False	NA	NA	False	NA	NA	NA	136803093	136802104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_136802546_136802998
ENSMUST00000129091.9	chr17	-	4599	5	FSM	ENSMUSG00000024018.19	ENSMUST00000129091.9	7117	5	1	2517	0	1598	multi-exon	FALSE	canonical	3	16	junction_1	115.181107391794	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTAATTGTGACTGAAC	NA	False	NA	NA	False	AATAAA	-17	NA	29935982	29914950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29919227_29923343_29923444_29924244_29924298_29924462_29924558_29935907
ENSMUST00000129100.8	chr19	-	4415	9	FSM	ENSMUSG00000025089.16	ENSMUST00000129100.8	4415	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.63391343821318	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAAAGATGGCATAGGT	561	False	NA	NA	False	AATAAA	-11	NA	58443024	58224043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58440400_58440485_58441595_58441890_58442740
ENSMUST00000129113.8	chr3	+	5603	39	FSM	ENSMUSG00000041977.19	ENSMUST00000129113.8	5603	39	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_20	19.7761013049965	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTACTCCCTCTCTCCTC	6178	False	NA	NA	False	NA	NA	NA	87524891	87643216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112
ENSMUST00000129116.8-1	chr1	+	2231	5	FSM	ENSMUSG00000013973.13	ENSMUST00000129116.8	849	5	0	-1382	0	0	multi-exon	FALSE	canonical	3	47	junction_1	84.8038177206663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCACTTTTCTGAAACTGA	1657	False	NA	NA	False	AATAAA	-17	NA	171157177	171169899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171157261_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUST00000129145.8	chr7	-	3074	3	FSM	ENSMUSG00000037552.18	ENSMUST00000129145.8	3074	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGCCTTTCTTG	NA	False	NA	-2	True	NA	NA	NA	28062766	28059029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28060687_28061232_28062134_28062250
ENSMUST00000129181.8	chr4	+	1232	6	FSM	ENSMUSG00000009863.15	ENSMUST00000129181.8	1232	6	0	0	0	0	multi-exon	FALSE	canonical	3	2820	junction_2	227.940694041235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGAGTTTGCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	140688711	140704107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425
ENSMUST00000129197.2	chr11	+	578	2	FSM	ENSMUSG00000069744.8	ENSMUST00000129197.2	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	3872	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	4374	False	NA	22	True	AATAAA	-15	NA	97602887	97604326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97603358_97604218
ENSMUST00000129200.2	chr17	-	1619	4	FSM	ENSMUSG00000023973.14	ENSMUST00000129200.2	1619	4	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_3	233.055072175369	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063123	47046681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47062898
ENSMUST00000129213.2	chr1	+	2074	7	FSM	ENSMUSG00000070644.14	ENSMUST00000129213.2	2074	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	9.46484724300046	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACGGTCTTGGAAGGACA	NA	False	NA	5	True	ATTAAA	-15	NA	133293069	133308054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
ENSMUST00000129218.7	chr1	+	1364	2	FSM	ENSMUSG00000026404.13	ENSMUST00000129218.7	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCACGGTATATTCTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	136343008	136345530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_136343162_136344319
ENSMUST00000129223.9	chr15	-	3750	28	FSM	ENSMUSG00000022469.18	ENSMUST00000129223.9	3750	28	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_8	10.6521248612827	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTTCTACCGCCTG	227	False	NA	-18	True	CATAAA	-13	NA	97665679	97642833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648036_97648140_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ENSMUST00000129229.2	chr11	+	1506	2	FSM	ENSMUSG00000044950.8	ENSMUST00000129229.2	1506	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAAGCCAAA	1513	False	NA	95	True	NA	NA	NA	43596069	43612318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_43596305_43611047
ENSMUST00000129231.2	chr13	-	694	6	FSM	ENSMUSG00000006191.18	ENSMUST00000129231.2	694	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	95.4136258612993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTCTAGAGAAGACCTG	NA	False	NA	NA	False	NA	NA	NA	30039648	30020977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_30021054_30022497_30022686_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ENSMUST00000129239.2	chrX	+	747	4	FSM	ENSMUSG00000002014.13	ENSMUST00000129239.2	747	4	0	0	0	0	multi-exon	FALSE	canonical	3	1491	junction_3	71.4438396380137	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGCTCCTGTGTCTATGG	7248	False	NA	52	True	AATAAA	-34	NA	72832449	72834436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72832560_72833405_72833481_72833636_72833727_72833964
ENSMUST00000129245.8	chr12	+	1498	3	FSM	ENSMUSG00000021268.18	ENSMUST00000129245.8	1498	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	159.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109506883	109511202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_109506983_109509582_109509689_109509909
ENSMUST00000129256.2	chr11	-	650	2	FSM	ENSMUSG00000017288.16	ENSMUST00000129256.2	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTATGTGTGTATG	NA	False	NA	-9	True	AATAAA	-16	NA	76070464	76067784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76068209_76070238
ENSMUST00000129269.8	chr9	+	6186	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTTATCCTGTTGC	NA	False	NA	15	True	AATAAA	-15	NA	100525500	100840598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUST00000129269.8-0	chr9	+	4879	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	168	1139	0	0	multi-exon	FALSE	canonical	3	316	junction_9	35.0771941586826	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100525668	100839459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUST00000129273.8	chr3	-	3050	7	FSM	ENSMUSG00000027881.15	ENSMUST00000129273.8	3050	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	171.074707527313	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGTGTTGGTTTCCCC	6881	False	NA	-7	True	AATAAA	-20	NA	108819012	108810120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
ENSMUST00000129280.8	chr16	+	679	6	FSM	ENSMUSG00000022503.11	ENSMUST00000129280.8	679	6	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	72.6151499344317	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTTCAGTGTAGACA	NA	False	NA	NA	False	GATAAA	-17	NA	10229817	10238415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119
ENSMUST00000129285.8	chr3	+	2818	7	FSM	ENSMUSG00000028019.10	ENSMUST00000129285.8	2818	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.8705372974374	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTGTTCGTCTAAGT	NA	False	NA	40	True	AATAAA	-25	NA	80944478	81121341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_80944862_81038324_81038384_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUST00000129308.9	chr3	-	2892	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAATGAGGGCATGTGTG	3744	False	NA	0	True	AATAAA	-35	NA	89319170	89309275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ENSMUST00000129308.9-0	chr3	-	1786	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	-7	1113	0	-415	multi-exon	FALSE	canonical	3	214	junction_7	45.7504321380282	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3737	False	NA	-15	True	AGTAAA	-18	NA	89319177	89310388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ENSMUST00000129314.2	chr4	-	4521	7	FSM	ENSMUSG00000029050.16	ENSMUST00000129314.2	4521	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	91.4872486561196	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGGTGCCTGCAGCCCC	NA	False	NA	-21	True	AATAAA	-15	NA	155272753	155238531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155272713
ENSMUST00000129321.2	chr11	+	2081	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGAAAGACTGTTATTG	NA	False	NA	10	True	AATAAA	-19	NA	69231286	69233467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69231885_69231984
ENSMUST00000129339.8	chr1	+	805	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	304	830	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	199.182730175083	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGCTCTTCATTTTGC	NA	False	NA	30	True	AATAAA	-15	NA	63216287	63218815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUST00000129398.8	chr15	-	2376	20	FSM	ENSMUSG00000062906.13	ENSMUST00000129398.8	2376	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	9.07555237820426	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGTCTCCGTTAC	NA	False	NA	-3	True	AATAAA	-17	NA	89012856	89007509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010832_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
ENSMUST00000129406.2	chr15	-	1107	3	FSM	ENSMUSG00000022474.16	ENSMUST00000129406.2	1107	3	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_2	95	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCAACACGTAGCATCC	6047	False	NA	NA	False	NA	NA	NA	81837705	81835602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81835814_81836124_81836241_81836925
ENSMUST00000129414.9	chr9	+	2114	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	0	0	0	0	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTGTACCACAATGACC	9984	False	NA	NA	False	NA	NA	NA	20554613	20558260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
ENSMUST00000129414.9-0	chr9	+	424	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	1503	187	0	0	multi-exon	FALSE	canonical	3	1046	junction_4	63.2114507031756	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556116	20558073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
ENSMUST00000129421.8	chr10	+	2305	20	FSM	ENSMUSG00000020017.15	ENSMUST00000129421.8	5319	20	302	2712	267	-74	multi-exon	FALSE	canonical	1	3	junction_2	3.06530942706548	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCACAATTCCATAGGTT	NA	False	NA	NA	False	TATAAA	-22	NA	93324931	93352454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_93325240_93325735_93325797_93325901_93325930_93326608_93326684_93326776_93326850_93326960_93327028_93327671_93327710_93328314_93328441_93330472_93330613_93332444_93332493_93333336_93333485_93334620_93334717_93334817_93334877_93336478_93336560_93339123_93339190_93339265_93339432_93343276_93343412_93349895_93350005_93350120_93350191_93352043
ENSMUST00000129423.8	chr7	+	1863	14	FSM	ENSMUSG00000030428.17	ENSMUST00000129423.8	4355	14	23	2469	0	0	multi-exon	FALSE	canonical	3	27	junction_13	14.7692307692308	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCAGCTAGGTCCTTCT	316	False	NA	3	True	AATAAA	-18	NA	4122554	4137238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4136864
ENSMUST00000129428.8	chr3	-	2520	13	FSM	ENSMUSG00000028163.18	ENSMUST00000129428.8	2520	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	12.1275054685161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGTTTATCTGTGATT	NA	False	NA	0	True	AATAAA	-21	NA	135314244	135290642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912
ENSMUST00000129449.3	chr13	+	7168	3	FSM	ENSMUSG00000087370.4	ENSMUST00000129449.3	7168	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCTGAACTCCTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	41759691	41794831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41759789_41781453_41781625_41787931
ENSMUST00000129456.8	chr10	+	5060	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_2	70.5	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAATTTTTGTTTTGTTTT	7592	False	NA	NA	False	AATAAA	-25	NA	11157073	11173796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_11157245_11165263_11167317_11170960
ENSMUST00000129456.8-0	chr10	+	3971	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	0	1089	0	-1089	multi-exon	FALSE	canonical	3	746	junction_2	70.5	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGCCTCACCTGTCA	7592	False	NA	8	True	AGTAAA	-11	NA	11157073	11172707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_11157245_11165263_11167317_11170960
ENSMUST00000129469.8	chr2	-	1782	14	FSM	ENSMUSG00000089917.8	ENSMUST00000129469.8	1782	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	28.5913877876066	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAGAAAATGATCGTGT	4583	False	NA	-13	True	AATAAA	-40	NA	181223765	181210955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUST00000129471.2	chr7	-	518	3	FSM	ENSMUSG00000040488.19	ENSMUST00000129471.2	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	13	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGCGACGCTGCGTCTC	NA	False	NA	NA	False	NA	NA	NA	27009887	27008385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27008493_27008710_27008840_27009605
ENSMUST00000129487.8	chrX	+	4556	20	FSM	ENSMUSG00000031314.19	ENSMUST00000129487.8	4556	20	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_3	29.7115402372327	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGAGTGATTTTAAGTAG	NA	False	NA	NA	False	AATAAA	-24	NA	100599915	100644640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ENSMUST00000129489.8	chr2	-	2316	15	FSM	ENSMUSG00000026767.13	ENSMUST00000129489.8	2316	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	43.9893887946924	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCACTTTTACATTTG	NA	False	NA	-22	True	AATAAA	-19	NA	12424255	12352073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408978_12410670_12410732_12414811_12414892_12423969
ENSMUST00000129492.8	chr10	+	1602	4	FSM	ENSMUSG00000020265.17	ENSMUST00000129492.8	487	4	0	-1115	0	0	multi-exon	FALSE	canonical	3	43	junction_1	597.315661940987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	25	True	AGTAAA	-18	NA	77442058	77453256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77442185_77445645_77445775_77449813_77449886_77451981
ENSMUST00000129523.3	chr17	-	1526	12	FSM	ENSMUSG00000036820.13	ENSMUST00000129523.3	1526	12	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_9	128.890369200834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382638	24374806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24380555_24380688_24381949_24382090_24382169_24382307_24382555
ENSMUST00000129531.8	chr11	+	745	3	FSM	ENSMUSG00000018449.13	ENSMUST00000129531.8	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_2	32	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTTTTTGTTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	70861316	70864317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70861414_70862589_70862761_70863840
ENSMUST00000129532.2	chr11	-	958	2	FSM	ENSMUSG00000034341.18	ENSMUST00000129532.2	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	1218	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGAAATTAAGAAAATAG	NA	False	NA	NA	False	AATACA	-9	NA	115977798	115973921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115974774_115977692
ENSMUST00000129549.2	chr10	-	1178	2	FSM	ENSMUSG00000004934.15	ENSMUST00000129549.2	1178	2	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	81003548	80998876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81000025_81003518
ENSMUST00000129552.2	chr7	+	2827	9	FSM	ENSMUSG00000030965.20	ENSMUST00000129552.2	2827	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	67.4532245337464	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACGATATTTTAGTGTC	NA	False	NA	13	True	AATAAA	-15	NA	132460977	132486837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478364_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUST00000129557.2	chr11	-	1372	10	FSM	ENSMUSG00000018160.16	ENSMUST00000129557.2	1372	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	68.4675285747617	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGACTTTGCATATTT	NA	False	NA	NA	False	AATAAA	-15	NA	98084102	98060736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_98061267_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUST00000129564.8	chr3	+	5647	28	FSM	ENSMUSG00000042404.17	ENSMUST00000129564.8	5647	28	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	11.4060845793856	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGTTCTCTGGATT	NA	False	NA	32	True	AGTAAA	-26	NA	90172491	90187976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90172869_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ENSMUST00000129570.3	chr11	-	1631	2	FSM	ENSMUSG00000085156.9	ENSMUST00000129570.3	1631	2	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGTTGATCGGGTTTG	NA	False	NA	-2	True	NA	NA	NA	6477759	6475591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6475818_6476354
ENSMUST00000129574.3	chr2	-	1091	4	FSM	ENSMUSG00000079497.5	ENSMUST00000129574.3	1091	4	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	6.12825877028341	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATCTGGCTACAGTCAG	NA	False	NA	NA	False	NA	NA	NA	29641697	29634930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_29635352_29636461_29636606_29637219_29637663_29641614
ENSMUST00000129589.8	chr15	-	4109	12	FSM	ENSMUSG00000037458.16	ENSMUST00000129589.8	4109	12	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_7	170.115711713824	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTTTACTTTGATGG	NA	False	NA	-11	True	GATAAA	-13	NA	38519413	38488484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUST00000129599.8	chr14	-	2802	12	FSM	ENSMUSG00000037697.20	ENSMUST00000129599.8	2802	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	23.0350074939848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTTCAATTATTTTTT	NA	False	NA	60	True	ATTAAA	-18	NA	45860647	45832178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297
ENSMUST00000129615.2	chr11	-	1793	2	FSM	ENSMUSG00000040667.12	ENSMUST00000129615.2	1793	2	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGGAAAGGTAGGTATCA	NA	False	NA	NA	False	NA	NA	NA	70839641	70835508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70836188_70838527
ENSMUST00000129632.8	chr17	+	3419	10	FSM	ENSMUSG00000068039.14	ENSMUST00000129632.8	3419	10	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_6	171.650232942271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCCTGTCCTCAGTTT	NA	False	NA	5	True	ATTAAA	-20	NA	13135335	13143449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13135517_13136684_13136771_13136929_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUST00000129637.8	chr4	-	598	3	FSM	ENSMUSG00000051557.16	ENSMUST00000129637.8	598	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	4	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGTAAGAAGGTGAGCCA	9652	False	NA	NA	False	NA	NA	NA	155975666	155974836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155975127_155975209_155975360_155975508
ENSMUST00000129662.3	chrX	+	2376	8	FSM	ENSMUSG00000031145.16	ENSMUST00000129662.3	2376	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	5.91435472699556	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGATGTAGCTCAGTGG	NA	False	NA	NA	False	AATAAA	-10	NA	7524771	7534425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ENSMUST00000129713.2	chr2	-	1309	2	FSM	ENSMUSG00000087648.2	ENSMUST00000129713.2	1309	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTAGCTACTTTATT	7129	False	NA	-4	True	NA	NA	NA	167996433	167994522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167995672_167996273
ENSMUST00000129718.2	chr4	+	717	3	FSM	ENSMUSG00000028676.18	ENSMUST00000129718.2	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_2	671.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTTTTATTTTATTTT	4706	False	NA	NA	False	NA	NA	NA	135583442	135586542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135583603_135585615_135585783_135586152
ENSMUST00000129758.3	chr4	+	330	2	FSM	ENSMUSG00000028407.5	ENSMUST00000129758.3	1044	2	0	714	0	0	multi-exon	FALSE	canonical	3	97	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGGCCTTTTGTGAT	-1	True	NA	7	True	AGTAAA	-17	NA	40269578	40270226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40269720_40270037
ENSMUST00000129760.8	chr4	+	1448	6	FSM	ENSMUSG00000028545.14	ENSMUST00000129760.8	1448	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	5.19230199429887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATAAGGCCTTTGCATTT	NA	False	NA	1	True	AATAAA	-13	NA	111272284	111317117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_111272598_111288213_111288348_111290283_111290751_111305702_111305852_111311281_111311496_111316946
ENSMUST00000129761.8	chr7	-	1157	10	FSM	ENSMUSG00000001794.14	ENSMUST00000129761.8	1157	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	497.427331996628	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCTCACTATGGAGCCA	NA	False	NA	NA	False	NA	NA	NA	29893206	29886907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892671
ENSMUST00000129808.2	chr7	+	955	4	FSM	ENSMUSG00000002043.18	ENSMUST00000129808.2	955	4	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	59.4025813131607	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCCCTTAAATGTGGT	525	False	NA	NA	False	NA	NA	NA	19242654	19249243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19242758_19248125_19248194_19248346_19249016_19249128
ENSMUST00000129817.9	chr3	-	3019	15	FSM	ENSMUSG00000037652.16	ENSMUST00000129817.9	3019	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.2919196062294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATTCCTCTCACAAGGT	NA	False	NA	NA	False	NA	NA	NA	31023548	30961459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990433_30991306_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921_31020085_31023522
ENSMUST00000129820.8	chr11	-	6453	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTGCTGCTTGGTCTC	NA	False	NA	-5	True	AATAAA	-15	NA	45835762	45819095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ENSMUST00000129820.8-0	chr11	-	1162	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	0	5291	0	-2480	multi-exon	FALSE	canonical	3	99	junction_3	23.3666428910958	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTATATCCTAGTCTC	NA	False	NA	-9	True	AATAAA	-15	NA	45835762	45824386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ENSMUST00000129822.8	chr2	-	860	8	FSM	ENSMUSG00000015790.17	ENSMUST00000129822.8	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	122.602393691051	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTCCTGCTGCCTGCTA	NA	False	NA	NA	False	NA	NA	NA	26806332	26803588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805762_26805966_26806019_26806268
ENSMUST00000129826.2	chr8	+	659	2	FSM	ENSMUSG00000060038.15	ENSMUST00000129826.2	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGTCTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	85798434	85799491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85798683_85799080
ENSMUST00000129847.8	chr7	+	593	7	FSM	ENSMUSG00000040952.17	ENSMUST00000129847.8	593	7	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_3	8759.20174096298	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24585531_24585613_24587706_24587891_24588331_24588387_24589165
ENSMUST00000129850.8	chr4	+	3411	8	FSM	ENSMUSG00000029068.17	ENSMUST00000129850.8	3411	8	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_7	256.098434519357	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGGAAGGCCCAAAGA	4655	False	NA	NA	False	NA	NA	NA	155896975	155906329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155904886_155905240_155905346_155905429_155905572_155906268
ENSMUST00000129857.8	chr2	-	4055	26	FSM	ENSMUSG00000027291.16	ENSMUST00000129857.8	4055	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	82.3630402547162	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAACAGTGCTGC	NA	False	NA	NA	False	NA	NA	NA	120183602	120147291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120179566_120179637_120180644_120180711_120183395
ENSMUST00000129871.2	chr6	+	837	2	FSM	ENSMUSG00000030271.15	ENSMUST00000129871.2	837	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTACTAAAGTGCTTC	2321	False	NA	NA	False	NA	NA	NA	113303945	113305784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113304324_113305325
ENSMUST00000129895.8	chr11	-	2635	13	FSM	ENSMUSG00000035172.16	ENSMUST00000129895.8	2635	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	20.3856907876306	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	1087	False	NA	3	True	AAGAAA	-22	NA	101061781	101053504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ENSMUST00000129900.2	chr16	-	1993	6	FSM	ENSMUSG00000022772.13	ENSMUST00000129900.2	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	18.1284307097995	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTAAAGGTTTTTAATT	NA	False	NA	NA	False	ATTAAA	-15	NA	31809171	31794639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31794848_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757
ENSMUST00000129909.8	chr8	-	705	4	FSM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10633.6606532694	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963005	70960912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962767
ENSMUST00000129935.8	chr17	+	949	6	FSM	ENSMUSG00000037805.16	ENSMUST00000129935.8	949	6	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_3	2914.49848859113	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547557	28550006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28547593_28547784_28547860_28547940_28548255_28548347_28548497_28549498_28549672_28549803
ENSMUST00000129966.8	chr4	+	851	6	FSM	ENSMUSG00000028911.17	ENSMUST00000129966.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	139.996571386588	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATTGTGGAGAATTTGT	NA	False	NA	NA	False	GATAAA	-30	NA	131601126	131619455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_131601182_131611586_131611794_131612619_131612804_131613417_131613616_131618517_131618661_131619391
ENSMUST00000129973.2	chr7	+	852	4	FSM	ENSMUSG00000035632.17	ENSMUST00000129973.2	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_1	32.8734948958377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCTGAGGCCTC	3433	False	NA	NA	False	AATAAA	-14	NA	3661170	3664099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3661391_3661607_3661741_3662379_3662506_3663726
ENSMUST00000129976.8	chr6	-	1886	7	FSM	ENSMUSG00000030127.16	ENSMUST00000129976.8	795	7	0	-1091	0	0	multi-exon	FALSE	canonical	3	167	junction_6	612.067443633098	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942253	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
ENSMUST00000129977.2	chr8	+	2087	4	FSM	ENSMUSG00000031979.18	ENSMUST00000129977.2	2087	4	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	23.2139804619735	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAATAAAAGTAAAAAAAT	NA	False	NA	NA	False	AATAAA	-25	NA	125261947	125271132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_125262263_125264521_125264649_125267711_125267852_125269627
ENSMUST00000129984.2	chr17	+	965	2	FSM	ENSMUSG00000044533.16	ENSMUST00000129984.2	965	2	0	0	0	0	multi-exon	FALSE	canonical	3	8303	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTCACAATTAACTGTGG	6389	False	NA	NA	False	NA	NA	NA	24939235	24940281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24939427_24939507
ENSMUST00000130027.2	chr11	-	1024	7	FSM	ENSMUSG00000019373.12	ENSMUST00000130027.2	1024	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	252.104916431411	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTTATGGTGACT	NA	False	NA	NA	False	TATAAA	-25	NA	59730664	59717035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUST00000130048.8	chr19	-	1158	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	60.459352736639	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4780	False	NA	-1	True	GATAAA	-17	NA	6964997	6959840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ENSMUST00000130098.8	chr8	+	1881	4	FSM	ENSMUSG00000074247.11	ENSMUST00000130098.8	1881	4	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	319.275568888208	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	False	NA	13	True	NA	NA	NA	71921842	71928742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71921970_71924680_71924762_71926418_71926481_71927131
ENSMUST00000130134.3	chr5	-	217	2	FSM	ENSMUSG00000054280.15	ENSMUST00000130134.3	217	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATGCTACTTTTTTCTT	7071	False	NA	NA	False	AAAACA	-5	NA	33011582	32992961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_32993033_33011436
ENSMUST00000130135.8	chr11	+	1601	9	FSM	ENSMUSG00000034121.13	ENSMUST00000130135.8	1601	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	26.4430401996442	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAAAAAAAAGCGC	6468	False	NA	NA	False	NA	NA	NA	87744052	87750139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428
ENSMUST00000130137.8	chr2	+	1934	6	FSM	ENSMUSG00000027115.15	ENSMUST00000130137.8	1934	6	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	30.596731851621	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAGAGAAAAGGC	1464	False	NA	NA	False	NA	NA	NA	109111170	109126405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283
ENSMUST00000130149.3	chr7	-	3216	4	FSM	ENSMUSG00000044702.14	ENSMUST00000130149.3	3216	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	6.34209919681348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGCTGCTTCTGGTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	121732142	121724804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121727667_121728145_121728240_121728896_121728957_121731942
ENSMUST00000130161.9	chr7	+	5088	8	FSM	ENSMUSG00000053091.17	ENSMUST00000130161.9	5088	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	19.3454102556442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAAGTGTCCTTGTGAT	NA	False	NA	NA	False	NA	NA	NA	66339705	66367004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359977_66360495_66361620_66361793_66363548
ENSMUST00000130165.8	chr2	-	1842	5	FSM	ENSMUSG00000027466.16	ENSMUST00000130165.8	1842	5	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	67.5092586242806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152164917	152158253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079
ENSMUST00000130173.9	chr8	+	923	8	FSM	ENSMUSG00000038416.16	ENSMUST00000130173.9	923	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	238.80219805504	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGAGCGCTTACATCC	NA	False	NA	NA	False	AATAAA	-8	NA	13807675	13816497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417
ENSMUST00000130174.2	chr11	-	583	5	FSM	ENSMUSG00000020419.12	ENSMUST00000130174.2	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	8.69985632065266	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAATTAAAGACTCATCT	NA	False	NA	NA	False	NA	NA	NA	4391105	4374247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
ENSMUST00000130178.2	chr2	-	3078	2	FSM	ENSMUSG00000050592.9	ENSMUST00000130178.2	525	2	0	-2553	0	0	multi-exon	TRUE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGCTCTGGTGGCAAT	NA	False	NA	NA	False	AATAAA	-35	NA	31969364	31956878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_31959786_31969193
ENSMUST00000130179.2	chrX	+	3355	7	FSM	ENSMUSG00000015214.15	ENSMUST00000130179.2	3355	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	30.4995446231943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAATAACATGAAC	NA	False	NA	NA	False	NA	NA	NA	70437596	70462270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_70438073_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ENSMUST00000130195.2	chr2	+	462	2	FSM	ENSMUSG00000076441.10	ENSMUST00000130195.2	462	2	0	0	0	0	multi-exon	FALSE	canonical	3	3437	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCCCCCCCCGCCCCCC	NA	False	NA	NA	False	GATAAA	-43	NA	31408501	31410543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31408804_31410383
ENSMUST00000130198.3	chr10	+	1463	3	FSM	ENSMUSG00000020224.16	ENSMUST00000130198.3	1463	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	477.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGAGTTTGACATTT	NA	False	NA	8	True	AATAAA	-17	NA	120063090	120067976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_120063455_120063878_120064109_120067107
ENSMUST00000130198.3-0	chr10	+	1167	3	FSM	ENSMUSG00000020224.16	ENSMUST00000130198.3	1463	3	-116	412	0	95	multi-exon	FALSE	canonical	3	35	junction_1	477.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGTTATGCTGAAGT	NA	False	NA	4	True	AATAAA	-16	NA	120062974	120067564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_120063455_120063878_120064109_120067107
ENSMUST00000130201.8-1	chr1	-	797	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	0	1097	0	133	multi-exon	FALSE	canonical	3	144	junction_1	911.97762445139	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCTGAGTCCCTGGTCT	1649	False	NA	-8	True	NA	NA	NA	4855933	4844525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUST00000130216.3	chr17	+	2618	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGAGTATATTTTTATC	NA	False	NA	18	True	ATTAAA	-20	NA	29251601	29262347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUST00000130216.3-0	chr17	+	2097	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	45	476	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	257.831728070849	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTGTGTCTAGAAGGT	NA	False	NA	15	True	AATAAA	-17	NA	29251646	29261871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUST00000130219.2	chr4	+	805	3	FSM	ENSMUSG00000028729.16	ENSMUST00000130219.2	805	3	0	0	0	0	multi-exon	FALSE	canonical	3	2481	junction_2	26.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTTGGTGTGTCTGTC	NA	False	NA	NA	False	AATAAA	-40	NA	118478044	118479128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118478195_118478278_118478363_118478557
ENSMUST00000130235.9	chr13	-	3730	9	FSM	ENSMUSG00000021464.16	ENSMUST00000130235.9	3730	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	41.0561734091233	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTATCTCTGGGATACC	NA	False	NA	-23	True	NA	NA	NA	53439585	53263347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_53265705_53267083_53267287_53271170_53271417_53272726_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439501
ENSMUST00000130243.8	chrX	+	5010	25	FSM	ENSMUSG00000025261.19	ENSMUST00000130243.8	5010	25	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	19.9095175453573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAAAGATTGGGGG	NA	False	NA	NA	False	AATGAA	-34	NA	150586342	150656544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475
ENSMUST00000130261.2	chr2	+	764	2	FSM	ENSMUSG00000000827.19	ENSMUST00000130261.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAACAGTCTTGTACATA	NA	False	NA	-18	True	NA	NA	NA	181154370	181157126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181154881_181156872
ENSMUST00000130269.2	chr11	+	2096	11	FSM	ENSMUSG00000018932.10	ENSMUST00000130269.2	2096	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	128.562980674843	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTGTGAGACTGACTGT	NA	False	NA	NA	False	NA	NA	NA	60822891	60843620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUST00000130289.2	chr2	-	765	3	FSM	ENSMUSG00000040174.15	ENSMUST00000130289.2	765	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTTGTTTCTTCCTCA	8853	False	NA	NA	False	NA	NA	NA	93841097	93838381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93838488_93838768_93838938_93840607
ENSMUST00000130290.2	chr10	-	2658	11	FSM	ENSMUSG00000039480.15	ENSMUST00000130290.2	1978	11	-24	-656	0	0	multi-exon	FALSE	canonical	2	9	junction_6	26.4469279879535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGTATTATTGAATA	NA	False	NA	-1	True	AATAAA	-17	NA	34294548	34179604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUST00000130300.3	chr18	-	6572	11	FSM	ENSMUSG00000046318.17	ENSMUST00000130300.3	6572	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	3.55527776692624	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	66425738	66189925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_66194592_66198939_66198976_66199653_66199690_66199799_66199940_66204271_66204393_66209378_66209483_66216165_66216319_66217808_66217944_66227068_66227122_66424202_66424284_66424691
ENSMUST00000130310.8	chr7	-	2969	11	FSM	ENSMUSG00000025586.18	ENSMUST00000130310.8	2969	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	10.7256701422335	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81086125	80996775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950
ENSMUST00000130320.8	chr10	+	5388	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAATGGCCCTACCCTG	NA	False	NA	3	True	AATAAA	-20	NA	85857835	85887737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUST00000130320.8-0	chr10	+	1890	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	-52	3550	-52	0	multi-exon	FALSE	canonical	3	208	junction_3	24.7878498462452	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85857783	85884187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUST00000130325.8	chr8	-	3792	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATCTTTCCCATCTATG	NA	False	NA	NA	False	GATAAA	-24	NA	79547769	79531493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ENSMUST00000130325.8-0	chr8	-	2089	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	0	1703	0	-117	multi-exon	FALSE	canonical	3	636	junction_4	242.43865203387	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTAGTCTCCTCGTGGT	NA	False	NA	-7	True	NA	NA	NA	79547769	79533196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ENSMUST00000130340.2	chr7	-	675	2	FSM	ENSMUSG00000030417.16	ENSMUST00000130340.2	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCAGGTTGTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	35346891	35345092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35345607_35346730
ENSMUST00000130348.2	chr3	-	4885	6	FSM	ENSMUSG00000042997.14	ENSMUST00000130348.2	4885	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	7.03135833249878	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTATTGGCTTTATT	NA	False	NA	NA	False	AATAAA	-12	NA	53370744	53356008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369732_53369886_53370480
ENSMUST00000130350.2	chr16	-	3798	2	FSM	ENSMUSG00000022828.11	ENSMUST00000130350.2	3798	2	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37360138	37352881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_37356556_37360014
ENSMUST00000130361.8	chr12	-	628	5	FSM	ENSMUSG00000073164.12	ENSMUST00000130361.8	628	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGAAAGGTTGATGGC	NA	False	NA	NA	False	NA	NA	NA	23059999	23032386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_23032548_23033061_23033187_23042788_23042850_23043051_23043179_23059845
ENSMUST00000130367.8	chr17	+	3187	10	FSM	ENSMUSG00000024457.17	ENSMUST00000130367.8	3187	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	52.5084355362939	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148034	37170290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ENSMUST00000130368.8	chr9	-	1162	11	FSM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	343.30050975785	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5443	False	NA	-3	True	AATAAA	-19	NA	54641781	54624442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641758
ENSMUST00000130379.9	chr17	-	3753	23	FSM	ENSMUSG00000005371.16	ENSMUST00000130379.9	3753	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_20	22.0632542949277	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGAATTTACCACC	NA	False	NA	0	True	AATAAA	-17	NA	88372456	88298286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436
ENSMUST00000130392.8	chr11	-	1540	3	FSM	ENSMUSG00000087060.8	ENSMUST00000130392.8	1540	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGTATCGTTTATTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16901099	16885153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_16886565_16900881_16900931_16901019
ENSMUST00000130411.7	chr2	+	3527	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	0	0	0	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTCTTCATTTATTG	NA	False	NA	17	True	AATAAA	-18	NA	162773447	162779041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ENSMUST00000130411.7-1	chr2	+	1751	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	0	1776	0	137	multi-exon	FALSE	canonical	3	865	junction_2	49.2097551304617	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTTATTTTGTGCTGTT	NA	False	NA	2	True	AATAAA	-15	NA	162773447	162777265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ENSMUST00000130412.8	chr8	+	1613	11	FSM	ENSMUSG00000031634.14	ENSMUST00000130412.8	1613	11	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_5	20.5873747719324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGCTGTGATTTAA	8866	False	NA	3	True	AATAAA	-16	NA	46428570	46449894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_46428626_46432245_46432333_46433351_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUST00000130418.8	chr6	+	3125	23	FSM	ENSMUSG00000030088.16	ENSMUST00000130418.8	4175	23	16	1034	0	0	multi-exon	FALSE	canonical	3	47	junction_1	39.2549675753126	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGTCACTGCTCTG	NA	False	NA	13	True	AATAAA	-23	NA	90527786	90576151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_90527953_90534183_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90553609_90553761_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ENSMUST00000130420.8	chr11	-	3391	18	FSM	ENSMUSG00000033389.17	ENSMUST00000130420.8	3391	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.58116405592879	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGGCACATGGTCTTG	NA	False	NA	-2	True	ATTAAA	-18	NA	64950660	64892866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64903732_64903751_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649
ENSMUST00000130430.2	chr2	+	1527	2	FSM	ENSMUSG00000027510.18	ENSMUST00000130430.2	1527	2	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAATAAAACTTGTTT	NA	False	NA	NA	False	NA	NA	NA	172864842	172876493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172865175_172875298
ENSMUST00000130439.3	chr7	-	3805	7	FSM	ENSMUSG00000025139.15	ENSMUST00000130439.3	1892	7	-107	-1806	0	0	multi-exon	FALSE	canonical	3	12	junction_6	128.120602905578	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTTGTTCTTGAGTAT	2769	False	NA	-5	True	AATAAA	-21	NA	141456152	141435319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141452431_141452521_141456012
ENSMUST00000130451.2	chr5	-	1253	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	19	3932	0	0	multi-exon	FALSE	canonical	3	820	junction_1	20.5	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	3231	False	NA	-41	True	AATAAA	-14	NA	121590550	121582818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121583636_121585203_121585343_121590253
ENSMUST00000130458.8	chr8	-	2291	4	FSM	ENSMUSG00000092260.8	ENSMUST00000130458.8	2291	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATTTGGAAAAGGTATCA	9672	False	NA	NA	False	AATAAA	-16	NA	70202612	70194288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70196261_70196841_70196903_70197110_70197238_70202481
ENSMUST00000130458.8-0	chr8	-	2018	4	FSM	ENSMUSG00000092260.8	ENSMUST00000130458.8	2291	4	0	273	0	-273	multi-exon	FALSE	canonical	3	15	junction_3	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCACTCTGTCGTCTCT	9672	False	NA	NA	False	NA	NA	NA	70202612	70194561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70196261_70196841_70196903_70197110_70197238_70202481
ENSMUST00000130469.8	chr19	-	1979	15	FSM	ENSMUSG00000024830.18	ENSMUST00000130469.8	1979	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	32.5877935079116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2803	False	NA	-2	True	AGTAAA	-14	NA	4213299	4206793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4209564_4209705_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ENSMUST00000130487.8	chr7	-	405	3	FSM	ENSMUSG00000061787.16	ENSMUST00000130487.8	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	12924	junction_1	227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTATTGTTCTTGC	NA	False	NA	-9	True	AATAAA	-13	NA	80994279	80992479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80992598_80993482_80993549_80994058
ENSMUST00000130491.3	chr7	-	4709	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTTATCACGTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34755998	34745846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34750358_34755800
ENSMUST00000130491.3-0	chr7	-	3683	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	0	1026	0	-1026	multi-exon	FALSE	canonical	3	425	junction_1	0	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTTTTTCTTCGTGGGTT	NA	False	NA	-4	True	AATAAA	-19	NA	34755998	34746872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34750358_34755800
ENSMUST00000130498.2	chr7	+	371	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	530	365	0	0	multi-exon	FALSE	canonical	3	2284	junction_2	148	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1141	False	NA	18	True	ATTAAA	-13	NA	126295137	126295865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126295272_126295354_126295453_126295726
ENSMUST00000130531.2	chr10	+	1390	3	FSM	ENSMUSG00000020072.16	ENSMUST00000130531.2	847	3	142	-685	142	0	multi-exon	FALSE	canonical	2	8	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATTTGGTGAAATT	4471	False	NA	NA	False	AATAAA	-16	NA	62890130	62894592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_62890285_62892557_62892621_62893419
ENSMUST00000130590.8	chr10	+	3220	7	FSM	ENSMUSG00000019796.13	ENSMUST00000130590.8	3220	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	91.3947482079797	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7427	False	NA	23	True	AATAAA	-30	NA	7465742	7501247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484311_7484404_7499393
ENSMUST00000130597.8	chr2	+	2959	8	FSM	ENSMUSG00000037523.14	ENSMUST00000130597.8	2959	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	83.1212539435183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	7260	False	NA	11	True	ATTAAA	-16	NA	131075982	131089942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131076048_131080655_131080831_131081371_131081463_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ENSMUST00000130606.8	chr6	+	2282	10	FSM	ENSMUSG00000015733.14	ENSMUST00000130606.8	1046	10	-68	-1168	0	-216	multi-exon	FALSE	canonical	3	30	junction_6	571.076371619613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTAATTTCTTTTTA	3	True	NA	14	True	TTTAAA	-16	NA	17637040	17666755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660727_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUST00000130619.11	chr19	+	1042	6	FSM	ENSMUSG00000024845.20	ENSMUST00000130619.11	1615	6	15	558	0	0	multi-exon	FALSE	canonical	3	568	junction_2	76.3952878127964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4386	False	NA	NA	False	AATAAA	-16	NA	4175974	4181726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUST00000130632.8	chr4	+	1878	3	FSM	ENSMUSG00000063524.14	ENSMUST00000130632.8	1878	3	0	0	0	0	multi-exon	FALSE	canonical	3	15633	junction_2	329.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCATTT	NA	False	NA	NA	False	NA	NA	NA	150321696	150327184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_150321798_150323929_150324024_150325501
ENSMUST00000130643.9	chr17	-	4653	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCCACAAGTTTGGT	NA	False	NA	-11	True	AATAAA	-20	NA	28841683	28806621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUST00000130643.9-0	chr17	-	2489	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	222	1942	0	0	multi-exon	FALSE	canonical	3	554	junction_1	86.150875406657	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841461	28808563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUST00000130645.8	chr3	+	2953	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	130.277568667669	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGTATATTTATCTC	NA	False	NA	50	True	AATAAA	-36	NA	19242273	19274981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ENSMUST00000130658.2	chr4	+	4395	3	FSM	ENSMUSG00000051351.15	ENSMUST00000130658.2	791	3	0	-3604	0	-90	multi-exon	FALSE	canonical	3	10	junction_1	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTATCTTGGTAA	NA	False	NA	17	True	ATTAAA	-23	NA	136013414	136021163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136013793_136014499_136014627_136017273
ENSMUST00000130659.8	chr4	+	574	3	FSM	ENSMUSG00000085334.8	ENSMUST00000130659.8	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	16	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126929242	126930806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126929648_126930355_126930443_126930724
ENSMUST00000130663.10	chr15	+	1660	8	FSM	ENSMUSG00000033088.20	ENSMUST00000130663.10	1660	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	63.6226118191786	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATACAGAAATGGATTC	NA	False	NA	NA	False	AATAAA	-25	NA	78867276	78879059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78878497
ENSMUST00000130697.8	chr14	+	2459	9	FSM	ENSMUSG00000002325.16	ENSMUST00000130697.8	2459	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	14.5086181285469	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTCATGTGGTGTCTA	NA	False	NA	9	True	NA	NA	NA	55841441	55847487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55841701_55842508_55842690_55843177_55843362_55843549_55843624_55843774_55843896_55843993_55844066_55844970_55845313_55846141_55846258_55846377
ENSMUST00000130716.8	chr11	-	4040	18	FSM	ENSMUSG00000034354.18	ENSMUST00000130716.8	4040	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.1868797405845	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCAGTTGTCTTAATTT	NA	False	NA	-9	True	AAAAAG	-6	NA	4544863	4432558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4432940_4435362_4435452_4437224_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ENSMUST00000130731.2	chr3	-	705	2	FSM	ENSMUSG00000074653.11	ENSMUST00000130731.2	705	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAACTGCCTTCAGTTTG	NA	False	NA	-7	True	AGTAAA	-20	NA	30753959	30752270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_30752864_30753847
ENSMUST00000130765.2	chr15	-	753	2	FSM	ENSMUSG00000079020.10	ENSMUST00000130765.2	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCGGAGACCCAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	73517611	73477441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73477926_73517342
ENSMUST00000130767.2	chr11	-	820	4	FSM	ENSMUSG00000018669.15	ENSMUST00000130767.2	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	1091	junction_1	59.9054811070462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTTGATTATAGTTTG	NA	False	NA	NA	False	NA	NA	NA	96807193	96803510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96803881_96804207_96804309_96804490_96804623_96806976
ENSMUST00000130772.2	chr2	+	1594	4	FSM	ENSMUSG00000038685.19	ENSMUST00000130772.2	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	19.2930615046504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAATCCTTGGGTGTA	8823	False	NA	NA	False	NA	NA	NA	180993874	180997345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180993974_180994545_180994642_180995769_180995969_180996145
ENSMUST00000130778.2	chr3	+	1355	5	FSM	ENSMUSG00000027879.10	ENSMUST00000130778.2	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	133.810500335362	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCCTTGAAATTATAT	NA	False	NA	-25	True	ATTAAA	-11	NA	97808531	97829167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97808737_97814540_97814647_97819894_97820056_97821815_97821963_97828431
ENSMUST00000130795.2	chr5	+	725	3	FSM	ENSMUSG00000019179.11	ENSMUST00000130795.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	4848	junction_2	313	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCCTGCTACCCTTGA	650	False	NA	NA	False	NA	NA	NA	135807530	135813468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135807656_135812158_135812328_135813037
ENSMUST00000130804.8	chr1	-	1077	6	FSM	ENSMUSG00000026603.14	ENSMUST00000130804.8	1077	6	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_3	26.2343286554087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGGTTTCTGAATGT	NA	False	NA	-8	True	AATAAA	-15	NA	189621199	189612690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011
ENSMUST00000130817.3	chr6	-	437	2	FSM	ENSMUSG00000030246.13	ENSMUST00000130817.3	437	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142441374	142435974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142436331_142441293
ENSMUST00000130818.8	chr16	-	938	5	FSM	ENSMUSG00000071533.12	ENSMUST00000130818.8	938	5	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	876.141113063415	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTATATACAGAT	NA	False	NA	NA	False	AATAAA	-24	NA	55850039	55837361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55845001_55849965
ENSMUST00000130820.8	chr11	+	1417	9	FSM	ENSMUSG00000020888.17	ENSMUST00000130820.8	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_4	29.6637404923924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAACAAATACGT	7361	False	NA	NA	False	NA	NA	NA	69891646	69897787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339
ENSMUST00000130832.8	chrX	-	4374	9	FSM	ENSMUSG00000031166.14	ENSMUST00000130832.8	4374	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	12.8980376414399	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGTTGCTGGTT	6959	False	NA	-22	True	AATAAA	-23	NA	7999009	7989562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7998117_7998525
ENSMUST00000130835.8	chr11	-	884	5	FSM	ENSMUSG00000015869.17	ENSMUST00000130835.8	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_1	44.4936793263942	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGATGTTTCTGGTA	NA	False	NA	NA	False	AAAAAG	-45	NA	116381115	116369117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ENSMUST00000130857.2	chr7	-	1653	2	FSM	ENSMUSG00000030869.12	ENSMUST00000130857.2	1653	2	0	0	0	0	multi-exon	FALSE	canonical	3	4604	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTTCTTTTTCTGTG	NA	False	NA	2	True	AATAAA	-29	NA	121692315	121690040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121690187_121690808
ENSMUST00000130859.2	chr2	+	727	3	FSM	ENSMUSG00000085317.2	ENSMUST00000130859.2	727	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGCCGGGAAGGGGCATT	NA	False	NA	NA	False	NA	NA	NA	155433050	155434771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155433232_155433942_155434089_155434371
ENSMUST00000130881.8	chr2	-	1724	12	FSM	ENSMUSG00000027610.18	ENSMUST00000130881.8	1724	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_11	301.306960254025	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	8446	False	NA	-10	True	AATAAA	-11	NA	155434634	155405108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155434613
ENSMUST00000130891.3	chr13	-	3559	4	FSM	ENSMUSG00000071281.13	ENSMUST00000130891.3	1103	4	32	-2488	0	-392	multi-exon	TRUE	canonical	3	31	junction_1	3.85861230093008	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTCAAACTGGAGTGAAA	NA	False	NA	NA	False	ATTAAA	-21	NA	67872413	67853819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67872306
ENSMUST00000130911.8	chr10	-	2554	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_4	63.4932103071032	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCCTTGCGTGTGGGT	NA	False	NA	-4	True	AATAAA	-43	NA	82599978	82584534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ENSMUST00000130916.8	chr11	-	2055	12	FSM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	0	2310	0	0	multi-exon	FALSE	canonical	3	365	junction_8	49.9747043451001	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193112	101179087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ENSMUST00000130918.8	chr6	-	935	5	FSM	ENSMUSG00000030082.15	ENSMUST00000130918.8	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	50.4548065103811	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAACTCGGTGGGAAAG	9227	False	NA	NA	False	NA	NA	NA	88495755	88490792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUST00000130942.8	chr4	+	1319	10	FSM	ENSMUSG00000028601.19	ENSMUST00000130942.8	1319	10	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	222.335582197522	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCACCTTGGCTAGTGA	NA	False	NA	NA	False	NA	NA	NA	108022662	108036268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108022859_108026911_108026980_108027057_108027424_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUST00000130954.8	chr2	-	1221	3	FSM	ENSMUSG00000026927.18	ENSMUST00000130954.8	1221	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	61	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTCTCTATGGAGAGC	NA	False	NA	NA	False	NA	NA	NA	26279295	26276666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26277684_26278503_26278573_26279160
ENSMUST00000130973.8	chr11	+	497	4	FSM	ENSMUSG00000020430.13	ENSMUST00000130973.8	497	4	0	0	0	0	multi-exon	FALSE	canonical	3	1202	junction_2	27.5358352374178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAGAGGAGTTAGACCA	NA	False	NA	NA	False	NA	NA	NA	3914008	3920835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624
ENSMUST00000130976.8	chrX	-	3123	22	FSM	ENSMUSG00000031389.18	ENSMUST00000130976.8	3123	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	11.1118820594215	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954877	72938137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72938570_72939553_72939654_72939990_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72943790_72943883_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ENSMUST00000130990.2	chr12	-	2522	2	FSM	ENSMUSG00000037169.16	ENSMUST00000130990.2	2522	2	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGCGATGTTTTCCTTCC	NA	False	NA	-21	True	AATAAA	-17	NA	12990617	12986096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_12987612_12989610
ENSMUST00000131002.2	chr7	-	6345	35	FSM	ENSMUSG00000006307.17	ENSMUST00000131002.2	6345	35	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	36.750962136971	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGGTGGTCTTTCCGTGC	NA	False	NA	-25	True	AATAAA	-16	NA	30284765	30268284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270267_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275503_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418
ENSMUST00000131004.3	chr7	+	1987	2	FSM	ENSMUSG00000006649.18	ENSMUST00000131004.3	1987	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACTTTTCAAAAGTAAAA	125	False	NA	NA	False	AATGAA	-19	NA	30184339	30186415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30186175_30186263
ENSMUST00000131011.2	chr13	-	540	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	10515	junction_1	2196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGCCTCGTCTCTGCA	NA	False	NA	-14	True	AATAAA	-16	NA	86195023	86192934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_86193028_86193845_86193989_86194719
ENSMUST00000131011.2-0	chr13	-	405	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	130	5	0	0	multi-exon	FALSE	canonical	3	10515	junction_1	2196	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTCAATGCCTCGTCT	NA	False	NA	-19	True	AATAAA	-11	NA	86194893	86192939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_86193028_86193845_86193989_86194719
ENSMUST00000131042.2	chr11	+	182	2	FSM	ENSMUSG00000086617.2	ENSMUST00000131042.2	182	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGGTGCTGTTGGTATG	NA	False	NA	NA	False	NA	NA	NA	101501439	101502001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101501538_101501917
ENSMUST00000131052.8	chr4	-	835	6	FSM	ENSMUSG00000028741.14	ENSMUST00000131052.8	835	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	422.625318692574	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTGTTGTTT	8669	False	NA	-2	True	AATAAA	-44	NA	139076914	139074745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076829
ENSMUST00000131070.3	chr19	-	5059	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	0	0	0	0	multi-exon	TRUE	canonical	3	707	junction_13	63.1947496940125	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340010	37246141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ENSMUST00000131083.8	chr19	+	489	2	FSM	ENSMUSG00000024949.18	ENSMUST00000131083.8	489	2	0	0	0	0	multi-exon	FALSE	canonical	3	1212	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGCTTCTTGTTTGGG	834	False	NA	NA	False	NA	NA	NA	6413951	6415985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6414149_6415693
ENSMUST00000131103.9	chr11	-	1943	7	FSM	ENSMUSG00000062825.16	ENSMUST00000131103.9	1189	7	0	-754	0	0	multi-exon	FALSE	canonical	3	13	junction_4	2986.4483365139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239315	120236516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238317_120238363_120238461_120238702_120238794_120238924_120239250
ENSMUST00000131108.9	chr7	+	3220	4	FSM	ENSMUSG00000030560.18	ENSMUST00000131108.9	3220	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	178.66417908716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCACTGTGGCATTGTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	87927341	87940605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_87927583_87930594_87930741_87936101_87936187_87937857
ENSMUST00000131143.2	chr7	-	2584	18	FSM	ENSMUSG00000063808.15	ENSMUST00000131143.2	2584	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_15	38.6016834529004	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGACACAAGAGCAA	NA	False	NA	9	True	AAAAAG	-18	NA	35017865	34983043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007757_35008725_35008812_35009864_35010000_35017765
ENSMUST00000131186.8	chr10	+	10789	33	FSM	ENSMUSG00000019841.16	ENSMUST00000131186.8	10789	33	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	18.85944619912	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATGGAAACCAAATTAAAA	NA	False	NA	-25	True	TTTAAA	-29	NA	39608122	39751164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39608610_39618686_39618815_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ENSMUST00000131193.3	chr11	+	1299	9	FSM	ENSMUSG00000020873.16	ENSMUST00000131193.3	1299	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	72.2789734293453	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGACCCTGCTGCTGC	NA	False	NA	21	True	AATAAA	-22	NA	95275716	95282602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95275940_95276626_95276731_95277336_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUST00000131208.2	chr7	-	575	2	FSM	ENSMUSG00000000486.14	ENSMUST00000131208.2	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	126814297	126813618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126814017_126814120
ENSMUST00000131213.8	chr7	-	2991	21	FSM	ENSMUSG00000063808.15	ENSMUST00000131213.8	2991	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.8067662816676	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	False	NA	NA	False	ATTAAA	-10	NA	35017846	34975968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_34976237_34976633_34976705_34980874_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ENSMUST00000131231.2	chr4	-	1807	5	FSM	ENSMUSG00000038816.15	ENSMUST00000131231.2	654	5	52	-1205	52	0	multi-exon	FALSE	canonical	3	19	junction_4	112.62548557054	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACCGACTGGCTTAAT	NA	False	NA	-6	True	AATAAA	-21	NA	56814267	56810934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56814169
ENSMUST00000131252.8	chr19	+	4353	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCATCCTCTGGTCT	602	False	NA	22	True	AATAAA	-14	NA	6413719	6428060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ENSMUST00000131252.8-0	chr19	+	3294	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	232	827	0	0	multi-exon	FALSE	canonical	3	714	junction_12	157.964724437663	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ENSMUST00000131298.7	chr2	-	6035	18	FSM	ENSMUSG00000038831.17	ENSMUST00000131298.7	6035	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	7.39259893617541	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTCTATTTATTAGTGTC	NA	False	NA	NA	False	ATTAAA	-19	NA	33261441	33023428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ENSMUST00000131303.8	chr16	+	532	4	FSM	ENSMUSG00000075704.18	ENSMUST00000131303.8	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	7.03957069398096	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCCCTGACTGTCTCT	NA	False	NA	12	True	NA	NA	NA	18245211	18256562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251
ENSMUST00000131307.8	chr4	-	665	3	FSM	ENSMUSG00000028896.14	ENSMUST00000131307.8	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	155.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCTGGCTATCCCAGAA	5485	False	NA	NA	False	NA	NA	NA	132073012	132066025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132066553_132067235_132067318_132072956
ENSMUST00000131309.3	chr14	-	2848	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	0	9886	0	7384	multi-exon	FALSE	canonical	2	2	junction_3	9.80504405338848	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTTCTATGCAAGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	65499912	65439783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
ENSMUST00000131320.8	chr7	-	4484	6	FSM	ENSMUSG00000030509.18	ENSMUST00000131320.8	4484	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	17.8594512793647	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-32	NA	66338632	66294312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66338570
ENSMUST00000131332.8	chrX	+	1740	16	FSM	ENSMUSG00000025287.16	ENSMUST00000131332.8	1740	16	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	338.793873747577	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTACGATTGTGAGTCTCC	NA	False	NA	18	True	AATAAA	-12	NA	154045500	154080642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_154045671_154047031_154047090_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUST00000131343.8	chr9	-	1773	4	FSM	ENSMUSG00000066892.15	ENSMUST00000131343.8	761	4	3	-1015	0	0	multi-exon	FALSE	canonical	3	9	junction_3	34.3446583263767	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556051	20549081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20550495_20553319_20553393_20555490_20555595_20555868
ENSMUST00000131351.8	chr9	-	3316	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	32.2800247831379	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTCTGTTACTTTTTAA	NA	False	NA	-3	True	AATAAA	-17	NA	50528764	50516539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
ENSMUST00000131354.8	chr3	+	2374	4	FSM	ENSMUSG00000027940.19	ENSMUST00000131354.8	2374	4	0	0	0	0	multi-exon	FALSE	canonical	3	3249	junction_3	165.811807648175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAGAAAAAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	89986971	89996903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980
ENSMUST00000131365.2	chr2	-	629	2	FSM	ENSMUSG00000087547.2	ENSMUST00000131365.2	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATCTGGCCAAATATG	8707	False	NA	-13	True	NA	NA	NA	157439240	157437502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_157437906_157439014
ENSMUST00000131374.8	chr7	-	487	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	0	4692	0	0	multi-exon	FALSE	canonical	3	7367	junction_4	1521.10568337641	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGTCAGTCCTTTTGA	NA	False	NA	-33	True	AATAAA	-19	NA	117715411	117708286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
ENSMUST00000131379.4	chr7	+	2276	4	FSM	ENSMUSG00000054272.7	ENSMUST00000131379.4	2276	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	11.2644968324772	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAGTAGTTTGGAGGA	NA	False	NA	NA	False	NA	NA	NA	10739671	10744474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_10739779_10740385_10740858_10742693_10742854_10742937
ENSMUST00000131384.3	chr7	-	1974	8	FSM	ENSMUSG00000053801.19	ENSMUST00000131384.3	1974	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	174.077744770806	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTCTGAGCTTCTTTGCT	8479	False	NA	0	True	AATAAA	-35	NA	45480368	45474646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018_45480214_45480296
ENSMUST00000131412.8	chr1	+	2160	21	FSM	ENSMUSG00000062590.14	ENSMUST00000131412.8	2160	21	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_14	12.2982722363753	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATTCTCTTTATTGT	NA	False	NA	8	True	AATAAA	-13	NA	86082536	86180211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998
ENSMUST00000131422.8	chr10	+	4122	21	FSM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	65.9729300546823	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGAGTCATTTTTCAT	NA	False	NA	59	True	AATAAA	-20	NA	62782804	62809964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ENSMUST00000131428.8	chr1	-	1557	6	FSM	ENSMUSG00000026304.14	ENSMUST00000131428.8	1557	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.49666295470958	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTCATGAGGTTATAT	NA	False	NA	NA	False	ATTAAA	-16	NA	90895389	90885856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_90886722_90886889_90886984_90887723_90887850_90888832_90888985_90891865_90892026_90895229
ENSMUST00000131446.8	chr7	-	3275	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTTATTGTATTGTAC	NA	False	NA	NA	False	NA	NA	NA	105289623	105283409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ENSMUST00000131446.8-0	chr7	-	1792	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	65	1418	0	0	multi-exon	FALSE	canonical	3	112	junction_3	9.16515138991168	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGTGAGGTCAATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	105289558	105284827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ENSMUST00000131455.2	chr14	+	453	2	FSM	ENSMUSG00000021963.18	ENSMUST00000131455.2	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	2836	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAAGCCTCGAGCCACG	NA	False	NA	NA	False	NA	NA	NA	58035720	58036306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_58035812_58035944
ENSMUST00000131457.2	chr2	+	566	3	FSM	ENSMUSG00000087283.2	ENSMUST00000131457.2	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGGTATACCCTTAT	9346	False	NA	NA	False	NA	NA	NA	60241868	60242923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_60242062_60242190_60242353_60242712
ENSMUST00000131475.2	chr6	-	892	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	0	3068	0	0	multi-exon	FALSE	canonical	3	101	junction_2	27.1947707391615	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGCCGTGGGTTCTCCT	2700	False	NA	-2	True	ATTAAA	-32	NA	54969935	54962632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
ENSMUST00000131489.8	chr8	+	4609	11	FSM	ENSMUSG00000036054.16	ENSMUST00000131489.8	4609	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	9.88989383158384	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1092	False	NA	26	True	AATAAA	-17	NA	70686875	70715755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713968_70715520
ENSMUST00000131520.8	chr4	+	4360	6	FSM	ENSMUSG00000038827.12	ENSMUST00000131520.8	4360	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	52.8189359983709	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTTTCTGTGTACGTT	3	True	NA	13	True	AATAAA	-22	NA	56802351	56809601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_56802727_56803507_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ENSMUST00000131532.2	chr4	-	1151	2	FSM	ENSMUSG00000028438.17	ENSMUST00000131532.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGAAAAATCTCTGTT	-33	True	NA	NA	False	AAGAAA	-16	NA	41464887	41454389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41455363_41464709
ENSMUST00000131534.8	chr2	-	1930	4	FSM	ENSMUSG00000035949.16	ENSMUST00000131534.8	1930	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	100.641277151409	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCAGCTCCAATATGTT	9120	False	NA	NA	False	NA	NA	NA	34716323	34701850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34703022_34712569_34713080_34715973_34716083_34716183
ENSMUST00000131556.2	chr1	-	3424	20	FSM	ENSMUSG00000067851.12	ENSMUST00000131556.2	3424	20	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_17	20.9399616632847	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATGTAATGTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	10302895	10243299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ENSMUST00000131569.2	chr11	-	758	2	FSM	ENSMUSG00000025377.15	ENSMUST00000131569.2	758	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGCCACGTGAAGCTCAA	NA	False	NA	NA	False	NA	NA	NA	119989526	119987724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119988408_119989451
ENSMUST00000131656.2	chr4	+	3714	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_2	33.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACTGTTGGTTGGAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	108185336	108198741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108185488_108189407_108189549_108195319
ENSMUST00000131657.8	chr7	-	1350	9	FSM	ENSMUSG00000044702.14	ENSMUST00000131657.8	1350	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	49.3653471576976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGCTTGGCTTGTTCT	NA	False	NA	-5	True	AATAAA	-15	NA	121723668	121706489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723616
ENSMUST00000131668.3	chr4	+	5093	10	FSM	ENSMUSG00000035969.16	ENSMUST00000131668.3	5093	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	4.94413232473044	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTCTTTGTGCCCCT	8143	False	NA	17	True	AATAAA	-19	NA	43414695	43427088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227
ENSMUST00000131671.8	chr4	+	2543	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	97.5394823509124	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038252	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUST00000131676.8	chr2	+	1272	3	FSM	ENSMUSG00000078898.10	ENSMUST00000131676.8	1272	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	13	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGTTCCCATTTCATG	NA	False	NA	NA	False	NA	NA	NA	175214228	175223579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_175214367_175222239_175222367_175222572
ENSMUST00000131683.8	chr7	-	601	4	FSM	ENSMUSG00000043866.12	ENSMUST00000131683.8	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	1257	junction_1	50.2084543567006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGCTGATCCCTCCCAT	6718	False	NA	-30	True	AATAAA	-15	NA	105393289	105392102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036
ENSMUST00000131687.2	chr11	+	612	4	FSM	ENSMUSG00000085860.2	ENSMUST00000131687.2	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3917535302941	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	29	True	AATATA	-14	NA	97489336	97513719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97489494_97505749_97505855_97509262_97509326_97513432
ENSMUST00000131688.8	chr7	-	3379	6	FSM	ENSMUSG00000035596.15	ENSMUST00000131688.8	3379	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	84.5614569410911	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTTCCTGTCTGACC	7964	False	NA	NA	False	NA	NA	NA	3695951	3686356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695745
ENSMUST00000131696.3	chr4	+	3616	11	FSM	ENSMUSG00000028948.17	ENSMUST00000131696.3	3616	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	202.328841246126	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7381	False	NA	NA	False	NA	NA	NA	152123819	152144499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ENSMUST00000131728.4	chr10	-	2483	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	0	0	0	0	multi-exon	FALSE	canonical	3	1853	junction_11	115.182428067554	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGTGTGTTCTCTT	8692	False	NA	-7	True	AATAAA	-12	NA	128401856	128393636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUST00000131764.2	chr11	+	2135	2	FSM	ENSMUSG00000058755.4	ENSMUST00000131764.2	773	2	0	-1362	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTCAGTCTTTTAT	8293	False	NA	5	True	TTTAAA	-18	NA	4186419	4191026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4186914_4189385
ENSMUST00000131787.2	chr11	+	462	5	FSM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	3662	junction_1	404.852056311932	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
ENSMUST00000131800.2	chr11	+	3851	14	FSM	ENSMUSG00000020716.17	ENSMUST00000131800.2	3851	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.72181630968525	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGCTGTAATTGTATT	NA	False	NA	NA	False	AATAAA	-31	NA	79230712	79321614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403
ENSMUST00000131805.2	chr6	-	1112	5	FSM	ENSMUSG00000038429.11	ENSMUST00000131805.2	1112	5	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_4	42.1329740227295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAACAAAGAGGAGGGGT	NA	False	NA	NA	False	NA	NA	NA	124795600	124792382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506
ENSMUST00000131814.8	chr3	+	1294	4	FSM	ENSMUSG00000048100.14	ENSMUST00000131814.8	596	4	1	-699	0	0	multi-exon	FALSE	canonical	3	6	junction_1	77.7988860245869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	14	True	AATAAA	-23	NA	108479014	108489385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108479069_108480195_108480275_108485431_108485530_108488322
ENSMUST00000131815.8	chr11	-	853	4	FSM	ENSMUSG00000000384.16	ENSMUST00000131815.8	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	235.927013195936	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGAGATAAGGCCTATTT	NA	False	NA	-12	True	AATAAA	-6	NA	6576022	6573199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6573462_6573815_6574284_6575148_6575214_6575964
ENSMUST00000131820.2	chr17	-	369	2	FSM	ENSMUSG00000034868.10	ENSMUST00000131820.2	369	2	0	0	0	0	multi-exon	FALSE	canonical	3	1981	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCGGTGGGGCCCCAA	3404	False	NA	NA	False	NA	NA	NA	71297525	71283930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71284242_71297467
ENSMUST00000131834.2	chr15	+	463	2	FSM	ENSMUSG00000022272.18	ENSMUST00000131834.2	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGCAGGGTATGCCGTC	64	False	NA	NA	False	NA	NA	NA	25758850	25776182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_25759238_25776106
ENSMUST00000131837.8	chr7	-	851	6	FSM	ENSMUSG00000005575.17	ENSMUST00000131837.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	920.064432526331	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGGGAATGTTACTGC	9069	False	NA	-24	True	NA	NA	NA	12771574	12769185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771521
ENSMUST00000131849.8	chr7	-	891	4	FSM	ENSMUSG00000003438.18	ENSMUST00000131849.8	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	2125	junction_2	175.307349151901	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGATGGGTAAGTCTGTT	2691	False	NA	NA	False	NA	NA	NA	28011462	28008930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28009526_28009720_28009753_28010293_28010445_28011349
ENSMUST00000131871.8	chr16	+	1737	10	FSM	ENSMUSG00000022884.17	ENSMUST00000131871.8	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	631.938131836603	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6073	False	NA	NA	False	AATAAA	-18	NA	22926527	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000131909.8	chr8	-	1406	8	FSM	ENSMUSG00000005150.17	ENSMUST00000131909.8	1406	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	7.90763000177031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTAGTCTTCATTCTT	NA	False	NA	-2	True	AATAAA	-35	NA	85807261	85801663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806855_85806941_85807063_85807141
ENSMUST00000131939.6	chr6	-	1902	4	FSM	ENSMUSG00000030035.15	ENSMUST00000131939.6	1902	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	19.1369334592098	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098540	83096025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83096702_83096848_83097026_83097165_83097858_83098183
ENSMUST00000131940.8	chr2	-	1273	6	FSM	ENSMUSG00000026922.14	ENSMUST00000131940.8	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	210.357219985433	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGAGTTCTTTCTCC	9602	False	NA	1	True	TATAAA	-45	NA	26494223	26483068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494135
ENSMUST00000131943.2	chr17	+	571	3	FSM	ENSMUSG00000023967.10	ENSMUST00000131943.2	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_2	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGGACTCCACAGGT	NA	False	NA	NA	False	NA	NA	NA	46421920	46434053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46422056_46428865_46428898_46433649
ENSMUST00000131990.2	chr16	-	3283	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAACATCCTCTGTAG	8675	False	NA	NA	False	NA	NA	NA	33787373	33775163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
ENSMUST00000131990.2-0	chr16	-	1481	5	FSM	ENSMUSG00000022814.7	ENSMUST00000131990.2	3283	5	0	1802	0	-1802	multi-exon	FALSE	canonical	3	47	junction_4	482.354123025812	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGACTGGTATTTGTTT	8675	False	NA	NA	False	NA	NA	NA	33787373	33776965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33787195
ENSMUST00000131992.8	chr5	-	3645	16	FSM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	96.401244805241	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	False	NA	-16	True	AATAAA	-16	NA	23984556	23945653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23984110
ENSMUST00000132004.8	chr14	-	2534	5	FSM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	61.6050931336038	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTTTTGGTTATATT	9946	False	NA	NA	False	AATAAA	-32	NA	103336411	103319119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336204
ENSMUST00000132004.8-0	chr14	-	3208	5	FSM	ENSMUSG00000022124.16	ENSMUST00000132004.8	2534	5	-24	-650	0	0	multi-exon	FALSE	canonical	3	39	junction_3	61.6050931336038	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9922	False	NA	-4	True	AATAAA	-13	NA	103336435	103318469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336204
ENSMUST00000132010.8	chr4	+	5432	5	FSM	ENSMUSG00000028211.12	ENSMUST00000132010.8	5432	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	77.6997425993163	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	8	True	NA	16	True	AATAAA	-17	NA	11156440	11174379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11167896_11167935_11169709
ENSMUST00000132032.8	chr8	-	2542	7	FSM	ENSMUSG00000031601.17	ENSMUST00000132032.8	2542	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	195.288177374418	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	False	NA	-3	True	AATAAA	-21	NA	40968888	40945582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40968744
ENSMUST00000132034.5	chr5	-	576	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTGTGGTCCCAAA	NA	False	NA	-5	True	NA	NA	NA	31065069	31063861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31064111_31064742
ENSMUST00000132035.2	chr3	+	904	4	FSM	ENSMUSG00000027601.14	ENSMUST00000132035.2	904	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	553.676801031071	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAGAAGGAGAGTGCTC	NA	False	NA	NA	False	NA	NA	NA	19242477	19265715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_19243057_19254189_19254332_19260615_19260715_19265631
ENSMUST00000132041.2	chr3	-	2016	10	FSM	ENSMUSG00000027932.15	ENSMUST00000132041.2	2016	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	39.8803766838334	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGCCCATCTTCGAGA	NA	False	NA	-19	True	AATAAA	-12	NA	90296971	90292547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296229_90296478
ENSMUST00000132049.2	chr16	-	932	3	FSM	ENSMUSG00000022956.12	ENSMUST00000132049.2	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	5653	junction_2	412	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGCAGCACGGATGCTG	947	False	NA	NA	False	NA	NA	NA	91728439	91725048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91725898_91727241_91727293_91728407
ENSMUST00000132066.4	chr1	+	1764	2	FSM	ENSMUSG00000004768.15	ENSMUST00000132066.4	1764	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTGTCTTTTTTTTC	NA	False	NA	69	True	TATAAA	-12	NA	33777217	33779853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_33777462_33778333
ENSMUST00000132073.2	chr4	-	872	6	FSM	ENSMUSG00000033379.14	ENSMUST00000132073.2	872	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	1048.97264025331	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGGTAAGTGGGTAACA	NA	False	NA	NA	False	NA	NA	NA	117744484	117742831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117743939
ENSMUST00000132077.4	chr11	-	6719	2	FSM	ENSMUSG00000056579.19	ENSMUST00000132077.4	6719	2	0	0	0	0	multi-exon	FALSE	canonical	3	2652	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTCTATTACTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	3597536	3589784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3595524_3596556
ENSMUST00000132102.2	chr5	+	1426	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_2	50.1141553997328	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCGACTCTTTGCTGTT	NA	False	NA	15	True	ATTAAA	-15	NA	146885514	146892416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
ENSMUST00000132108.2	chr4	+	354	2	FSM	ENSMUSG00000087332.2	ENSMUST00000132108.2	354	2	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACTACAATGAAATTCAAG	NA	False	NA	NA	False	NA	NA	NA	99457736	99461248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99457876_99461033
ENSMUST00000132109.8	chr5	-	828	5	FSM	ENSMUSG00000028959.15	ENSMUST00000132109.8	828	5	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	149.855763986575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24647213	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179
ENSMUST00000132158.8	chr1	+	2752	8	FSM	ENSMUSG00000026696.16	ENSMUST00000132158.8	2752	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	107.103040220574	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACTGTGGCTTGTTCAG	NA	False	NA	73	True	AATAAA	-24	NA	162398083	162426653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162424617
ENSMUST00000132169.8	chr5	+	1752	11	FSM	ENSMUSG00000029208.17	ENSMUST00000132169.8	1752	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	34.8122105014893	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	69714295	69724212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69721866_69721991_69722772_69722906_69723703
ENSMUST00000132171.2	chrX	-	843	2	FSM	ENSMUSG00000044348.15	ENSMUST00000132171.2	843	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGTAAAAAGT	NA	False	NA	NA	False	AGTAAA	-7	NA	135939051	135932543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135933250_135938914
ENSMUST00000132181.2	chr7	+	4227	3	FSM	ENSMUSG00000053091.17	ENSMUST00000132181.2	4227	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCAAGTGTCCTTGTG	NA	False	NA	NA	False	NA	NA	NA	66359893	66367002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_66360495_66361620_66361793_66363548
ENSMUST00000132193.8	chr7	+	1112	6	FSM	ENSMUSG00000042831.14	ENSMUST00000132193.8	1112	6	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_1	28.3125413906982	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGTTTTGGATTTTTTTT	NA	False	NA	8	True	AATAAA	-15	NA	30008212	30013728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30012133_30013343
ENSMUST00000132230.2	chr4	+	781	2	FSM	ENSMUSG00000028291.8	ENSMUST00000132230.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACCAAAAGAGGATGTCA	12	False	NA	NA	False	NA	NA	NA	34550950	34562769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_34551274_34562311
ENSMUST00000132233.2	chr13	-	709	2	FSM	ENSMUSG00000017778.15	ENSMUST00000132233.2	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	10515	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTCAATGCCTCGTCT	NA	False	NA	-19	True	AATAAA	-11	NA	86194466	86192939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_86193028_86193845
ENSMUST00000132241.2	chr16	-	687	2	FSM	ENSMUSG00000003526.13	ENSMUST00000132241.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTCTTTTCAATTTG	8213	False	NA	NA	False	NA	NA	NA	17906886	17902067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17902620_17906751
ENSMUST00000132253.5	chr5	-	448	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	63	633	0	0	multi-exon	FALSE	canonical	3	823	junction_2	132.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTTGTGGTCCCAAA	NA	False	NA	-5	True	NA	NA	NA	31065069	31063861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31064111_31064742_31064881_31065008
ENSMUST00000132303.2	chr7	+	943	3	FSM	ENSMUSG00000037706.18	ENSMUST00000132303.2	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	6204	junction_1	94.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGAGCTGGCCCTGGCTT	NA	False	NA	NA	False	NA	NA	NA	142619937	142621342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_142620500_142620883_142620971_142621048
ENSMUST00000132313.2	chr10	-	2501	7	FSM	ENSMUSG00000020232.18	ENSMUST00000132313.2	2501	7	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_2	31.1202863454407	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTAATATTTGTGGC	NA	False	NA	-11	True	AATAAA	-17	NA	81186203	81181884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719
ENSMUST00000132320.8	chr16	+	5004	26	FSM	ENSMUSG00000045983.17	ENSMUST00000132320.8	5004	26	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_7	293.732547736883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTATTGCCTCTTTACT	NA	False	NA	14	True	ATTAAA	-14	NA	20497025	20511631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUST00000132329.8	chr9	+	5398	26	FSM	ENSMUSG00000042185.15	ENSMUST00000132329.8	5398	26	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	14.7460638815923	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297492	31332629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308089_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ENSMUST00000132374.9	chr14	-	4598	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAGTCCCAATAAGATT	NA	False	NA	NA	False	AATAAA	-22	NA	4198560	4185692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
ENSMUST00000132374.9-0	chr14	-	930	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	102	3566	0	0	multi-exon	FALSE	canonical	3	85	junction_3	10.6144555520604	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACCATGGGAACTCTT	NA	False	NA	-39	True	AATAAA	-14	NA	4198458	4189258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
ENSMUST00000132413.2	chr6	-	713	4	FSM	ENSMUSG00000030304.12	ENSMUST00000132413.2	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	425.360500699766	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAAATGTTCTTATT	NA	False	NA	NA	False	AAGAAA	-1	NA	148113503	148104198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148104624_148106273_148106383_148108030_148108174_148113467
ENSMUST00000132416.8	chrX	+	2608	14	FSM	ENSMUSG00000041718.17	ENSMUST00000132416.8	2608	14	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_9	302.491097233167	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143129730	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ENSMUST00000132417.8	chr4	+	2795	6	FSM	ENSMUSG00000028608.16	ENSMUST00000132417.8	2795	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	262.709725743072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747094	107754315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107747400_107748661_107748719_107749156_107749234_107749418_107749451_107750530_107750609_107752069
ENSMUST00000132431.2	chr2	-	1037	3	FSM	ENSMUSG00000027566.16	ENSMUST00000132431.2	1037	3	0	0	0	0	multi-exon	FALSE	canonical	3	4468	junction_2	41.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTAAGTCGTTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	179681938	179679861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_179679981_179680517_179680643_179681145
ENSMUST00000132433.2	chr11	-	1054	2	FSM	ENSMUSG00000051232.14	ENSMUST00000132433.2	1054	2	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTCCAGAGCTTATAT	4985	False	NA	NA	False	NA	NA	NA	78399644	78398077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78398632_78399144
ENSMUST00000132445.8	chr3	-	1086	5	FSM	ENSMUSG00000027953.14	ENSMUST00000132445.8	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	12.4373429638327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	False	NA	-31	True	AATAAA	-17	NA	89177830	89175552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177447_89177692
ENSMUST00000132446.2	chr11	-	602	2	FSM	ENSMUSG00000000384.16	ENSMUST00000132446.2	602	2	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCCTTTGTTTGAAGC	NA	False	NA	NA	False	NA	NA	NA	6570445	6569585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6569714_6569971
ENSMUST00000132458.2	chr10	+	829	5	FSM	ENSMUSG00000054708.18	ENSMUST00000132458.2	829	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	34.9070193514141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGGCAGGAATACCCAGT	NA	False	NA	NA	False	NA	NA	NA	81479636	81483308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81479728_81480809_81480978_81482138_81482268_81482626_81482693_81482933
ENSMUST00000132460.2	chr2	-	877	1	FSM	ENSMUSG00000085513.2	ENSMUST00000132460.2	877	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATATTTCTAGAGTCT	NA	False	NA	NA	False	NA	NA	NA	177234350	177233473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177233500_177234400
ENSMUST00000132484.7	chr2	-	6595	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTCTTGCTTGGATT	NA	False	NA	-2	True	AATAAA	-22	NA	23462116	23396231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ENSMUST00000132484.7-0	chr2	-	2761	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	-2	3836	0	616	multi-exon	FALSE	canonical	3	29	junction_6	7.44580418759451	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATTAGTTGATCACT	NA	False	NA	NA	False	AATAAA	-13	NA	23462118	23400067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ENSMUST00000132534.4	chr2	+	2342	1	FSM	ENSMUSG00000026843.16	ENSMUST00000132534.4	2342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTAGTCTGTTTTGTTTG	NA	False	NA	30	True	AATAAA	-31	NA	31505190	31507532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31505200_31507500
ENSMUST00000132551.2	chr1	-	1405	2	FSM	ENSMUSG00000038633.6	ENSMUST00000132551.2	1405	2	0	0	0	0	multi-exon	FALSE	canonical	3	1179	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	182110369	182106061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182107284_182110186
ENSMUST00000132555.8	chr5	+	1632	7	FSM	ENSMUSG00000004455.17	ENSMUST00000132555.8	1632	7	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_6	895.497518453042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTTTCTGTCAGCA	NA	False	NA	3	True	ATTAAA	-19	NA	122296418	122313336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311344_122312117_122312179_122313042
ENSMUST00000132574.8	chr2	-	2095	6	FSM	ENSMUSG00000026927.18	ENSMUST00000132574.8	2095	6	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_4	36.635501907303	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGACTGTCTTGTCATT	NA	False	NA	-4	True	AATAAA	-12	NA	26277593	26272814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26276076_26276915_26277324_26277567
ENSMUST00000132583.8	chr8	+	4182	15	FSM	ENSMUSG00000031825.17	ENSMUST00000132583.8	4182	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.49318178288335	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTAGCACATCTTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	120719176	120779532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120719340_120737172_120737491_120740748_120740868_120742012_120742146_120742404_120742521_120745591_120745693_120750306_120750442_120752800_120752862_120755535_120755603_120756004_120756136_120757123_120757168_120757806_120757880_120760298_120760375_120766764_120766899_120777021
ENSMUST00000132586.2	chr5	-	393	1	FSM	ENSMUSG00000067058.8	ENSMUST00000132586.2	393	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGTAAAGCATAAATAAAAG	NA	False	NA	NA	False	AAAACA	-35	NA	105945579	105945186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_105945200_105945600
ENSMUST00000132590.8	chr6	-	3535	12	FSM	ENSMUSG00000030254.17	ENSMUST00000132590.8	3535	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	71.295566841422	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673609	112603375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673563
ENSMUST00000132600.2	chr2	-	630	3	FSM	ENSMUSG00000027175.11	ENSMUST00000132600.2	630	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	0.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTTTAAAATAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	104542511	104535294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_104535547_104536700_104536888_104542320
ENSMUST00000132618.2	chr11	+	383	2	FSM	ENSMUSG00000035530.14	ENSMUST00000132618.2	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	12768	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGTGTAGTCTTGAAGT	4956	False	NA	-1	True	AATAAA	-13	NA	100211709	100212359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100211876_100212142
ENSMUST00000132650.2	chr4	-	851	2	FSM	ENSMUSG00000025413.14	ENSMUST00000132650.2	851	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCTGAGCAAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	106524744	106519629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106520429_106524692
ENSMUST00000132661.2	chr13	+	2361	2	FSM	ENSMUSG00000050423.12	ENSMUST00000132661.2	2361	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCGGTCCCTTGCCATAG	NA	False	NA	NA	False	AATAAA	-26	NA	36151835	36154371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_36151966_36152140
ENSMUST00000132676.8	chr11	+	2863	10	FSM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	0	0	0	0	multi-exon	TRUE	canonical	1	116	junction_9	67.5268579397108	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877117	117914837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
ENSMUST00000132676.8-0	chr11	+	2270	10	FSM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	593	0	0	0	multi-exon	FALSE	canonical	1	116	junction_9	67.5268579397108	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877710	117914837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
ENSMUST00000132699.8	chr1	-	4013	18	FSM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	3.69512912342104	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTCCCAGTGTCTC	5027	False	NA	NA	False	AAGAAA	-43	NA	157239504	156968103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ENSMUST00000132719.2	chr3	+	3633	3	FSM	ENSMUSG00000038205.13	ENSMUST00000132719.2	3633	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAGGGAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	97573845	97580421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97574032_97574674_97574744_97577043
ENSMUST00000132764.2	chr4	-	297	2	FSM	ENSMUSG00000038816.15	ENSMUST00000132764.2	297	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTGACATCGAGAAACAAG	-16	True	NA	NA	False	NA	NA	NA	56846092	56844466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_56844635_56845963
ENSMUST00000132813.8	chr11	+	655	4	FSM	ENSMUSG00000024414.14	ENSMUST00000132813.8	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	381.100453365718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGATGGCTCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	94544601	94550744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94544668_94547233_94547445_94547808_94547877_94550434
ENSMUST00000132815.3	chr4	-	1824	2	FSM	ENSMUSG00000045973.19	ENSMUST00000132815.3	1005	2	0	-819	0	819	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGGTTTTAATGCAA	-16	True	NA	NA	False	AATAAA	-19	NA	45408760	45398421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_45400180_45408694
ENSMUST00000132821.8	chr15	-	528	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGACACCCACGCTCC	NA	False	NA	NA	False	NA	NA	NA	79855319	79802649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ENSMUST00000132821.8-0	chr15	-	3171	6	FSM	ENSMUSG00000053411.17	ENSMUST00000132821.8	528	6	-1	-2642	0	0	multi-exon	FALSE	canonical	3	258	junction_5	93.730251253264	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
ENSMUST00000132827.8	chr2	-	2858	12	FSM	ENSMUSG00000026771.15	ENSMUST00000132827.8	1516	12	-128	-1214	0	616	multi-exon	FALSE	canonical	3	30	junction_7	7.08391263228297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATTAGTTGATCACT	NA	False	NA	NA	False	AATAAA	-13	NA	23462118	23400067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23431530_23431628_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ENSMUST00000132846.2	chr11	+	745	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	425	0	0	0	multi-exon	FALSE	canonical	3	36680	junction_4	732.852474922477	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGTTTGTATTGGAG	NA	False	NA	2	True	AATAAA	-19	NA	6365867	6369817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUST00000132854.2	chr11	-	494	2	FSM	ENSMUSG00000001054.10	ENSMUST00000132854.2	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCACTAACATTGCCAG	NA	False	NA	NA	False	NA	NA	NA	51526580	51520158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_51520489_51526416
ENSMUST00000132859.8	chr16	+	3779	17	FSM	ENSMUSG00000022701.19	ENSMUST00000132859.8	3779	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	29.3489245969933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCGATCCAGCATAGT	NA	False	NA	NA	False	AATAAA	-14	NA	43710162	43784677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43710402_43712515_43712555_43718452_43718595_43725713_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ENSMUST00000132860.2	chr5	+	2355	2	FSM	ENSMUSG00000036323.15	ENSMUST00000132860.2	2355	2	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGGTATTGGCATTTT	NA	False	NA	28	True	AATAAA	-36	NA	77144820	77147784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_77145430_77146038
ENSMUST00000132862.8	chr7	-	2070	19	FSM	ENSMUSG00000078762.11	ENSMUST00000132862.8	2070	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	57.7150567683839	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364358	30353135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30353481_30353594_30353728_30356373_30356443_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ENSMUST00000132866.2	chr6	+	1253	5	FSM	ENSMUSG00000058440.15	ENSMUST00000132866.2	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	120.692791831161	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	NA	False	NA	NA	False	NA	NA	NA	30116113	30140903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
ENSMUST00000132874.2	chr11	-	729	3	FSM	ENSMUSG00000020477.11	ENSMUST00000132874.2	503	3	3	-229	0	0	multi-exon	FALSE	canonical	3	1753	junction_2	547.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGGGTCTCTCTCTC	NA	False	NA	-25	True	AATAAA	-18	NA	5657687	5654325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5654733_5657297_5657556_5657623
ENSMUST00000132895.8	chr4	+	2099	4	FSM	ENSMUSG00000032890.18	ENSMUST00000132895.8	2099	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	1.24721912892465	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAACAACTTTTTCCTCC	NA	False	NA	NA	False	NA	NA	NA	120712012	120741641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_120712320_120729673_120729848_120735034_120735283_120740271
ENSMUST00000132906.8	chr4	-	1874	8	FSM	ENSMUSG00000028923.15	ENSMUST00000132906.8	1874	8	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_6	160.29029787182	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8500	False	NA	-10	True	AATAAA	-22	NA	140805653	140793822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801074_140802270_140802372_140805523
ENSMUST00000132918.8	chr4	-	1750	14	FSM	ENSMUSG00000040044.12	ENSMUST00000132918.8	1750	14	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	106.750885145229	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	34598751	34571564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607
ENSMUST00000132922.2	chr7	+	792	3	FSM	ENSMUSG00000030611.11	ENSMUST00000132922.2	792	3	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	48	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCTGGCCTAGAATGC	NA	False	NA	NA	False	NA	NA	NA	78433118	78439053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78433172_78433320_78433429_78438422
ENSMUST00000132929.8	chr2	-	672	4	FSM	ENSMUSG00000027620.17	ENSMUST00000132929.8	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	893.526844712694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAACTGCTCAAAACAC	NA	False	NA	NA	False	NA	NA	NA	156022116	156019080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156019306_156020799_156020873_156021096_156021161_156021806
ENSMUST00000132947.2	chr5	+	3152	2	FSM	ENSMUSG00000034021.16	ENSMUST00000132947.2	3152	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGACTTTTAAAGGTT	NA	False	NA	22	True	ATTAAA	-36	NA	150728693	150733945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_150729178_150731277
ENSMUST00000132948.2	chr6	+	1761	17	FSM	ENSMUSG00000030263.14	ENSMUST00000132948.2	1761	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	14.1684894660652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTGTGGCTGGAACG	NA	False	NA	11	True	AATAAA	-16	NA	145091202	145120654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145091249_145093361_145093409_145093505_145093571_145093704_145093804_145095012_145095084_145104369_145104428_145106099_145106164_145106258_145106287_145106602_145106744_145110922_145111058_145113694_145113843_145115472_145115517_145117229_145117293_145117380_145117431_145117709_145117812_145119429_145119538_145120162
ENSMUST00000132955.8	chr13	-	482	4	FSM	ENSMUSG00000061474.12	ENSMUST00000132955.8	482	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	571.611950734257	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCAGGTGGTCACTT	NA	False	NA	NA	False	AATAAA	-26	NA	100880639	100872636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100880548
ENSMUST00000132962.8	chr5	-	3758	16	FSM	ENSMUSG00000029014.15	ENSMUST00000132962.8	3758	16	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_10	94.8326244847556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTTTCACTTGGAATTA	NA	False	NA	-11	True	AATAAA	-16	NA	21990168	21962278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ENSMUST00000132983.3	chr11	+	759	2	FSM	ENSMUSG00000018379.18	ENSMUST00000132983.3	759	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGGGAGGATGAATTACC	8289	False	NA	NA	False	NA	NA	NA	87940237	87941877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87940922_87941802
ENSMUST00000133006.2	chr4	-	574	5	FSM	ENSMUSG00000066000.13	ENSMUST00000133006.2	574	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	194.56666595283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAGTACACCTCATAAA	NA	False	NA	NA	False	AATATA	-14	NA	147726953	147698367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147698506_147699736_147699864_147702873_147702956_147725368_147725463_147726820
ENSMUST00000133032.8	chr17	+	2670	9	FSM	ENSMUSG00000024188.17	ENSMUST00000133032.8	2670	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	146.829354609356	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471957	26499694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUST00000133037.8	chr8	-	1060	10	FSM	ENSMUSG00000031816.16	ENSMUST00000133037.8	1060	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	18.6494629717802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACGCAGGCTCAGGCTGT	NA	False	NA	NA	False	NA	NA	NA	121835131	121824589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121835026
ENSMUST00000133054.8	chr11	+	605	3	FSM	ENSMUSG00000020877.12	ENSMUST00000133054.8	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTAATTTTTTTT	NA	False	NA	NA	False	GATAAA	-17	NA	96920777	96922032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96920882_96921241_96921416_96921705
ENSMUST00000133057.2	chr1	-	721	3	FSM	ENSMUSG00000026399.13	ENSMUST00000133057.2	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	29	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGTAAAAGTGAGTATG	NA	False	NA	NA	False	NA	NA	NA	130390188	130387329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_130387511_130389558_130389745_130389834
ENSMUST00000133090.2	chr3	-	2415	3	FSM	ENSMUSG00000055436.19	ENSMUST00000133090.2	2415	3	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	185	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAAAAAAAAATACTCTT	NA	False	NA	NA	False	NA	NA	NA	157742248	157730373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157732496_157737088_157737286_157742152
ENSMUST00000133093.2	chrX	-	2560	5	FSM	ENSMUSG00000039201.11	ENSMUST00000133093.2	2560	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	12.051970793194	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGTGGTATGTGTAT	NA	False	NA	-18	True	NA	NA	NA	8042197	8020721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8022306_8022554_8023018_8038976_8039132_8040439_8040550_8041949
ENSMUST00000133103.2	chr11	-	1007	3	FSM	ENSMUSG00000032673.6	ENSMUST00000133103.2	2126	3	0	1119	0	0	multi-exon	FALSE	canonical	3	43	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTGTCTTTAATTTG	NA	False	NA	-1	True	AATAAA	-23	NA	29465031	29462875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29463677_29464431_29464523_29464916
ENSMUST00000133117.8	chr8	+	2099	6	FSM	ENSMUSG00000031570.18	ENSMUST00000133117.8	2099	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	15.0545674132471	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGTGTGTGTGAGT	NA	False	NA	17	True	AATAAA	-29	NA	26210090	26214914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26212628_26214106
ENSMUST00000133131.2	chr11	+	1394	10	FSM	ENSMUSG00000020708.13	ENSMUST00000133131.2	1394	10	0	0	0	0	multi-exon	FALSE	canonical	3	2261	junction_6	179.113523556954	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACAACTCCAGTTTGTT	4536	False	NA	15	True	AATAAA	-19	NA	106146979	106153946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153518_106153622_106153710_106153834
ENSMUST00000133154.7	chr3	-	7299	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_17	18.4325197807334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTGAGCGTTTGTAGTT	8092	False	NA	-1	True	AATAAA	-17	NA	79475103	79363280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ENSMUST00000133154.7-0	chr3	-	7015	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	0	284	0	-284	multi-exon	FALSE	canonical	3	55	junction_17	18.4325197807334	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTATTCTCCTAGTG	8092	False	NA	-16	True	AATAAA	-14	NA	79475103	79363564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ENSMUST00000133157.8	chr4	+	2986	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGCTGACGACAATAT	5049	False	NA	33	True	ATTAAA	-15	NA	45018582	45033692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUST00000133157.8-0	chr4	+	1580	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	79	1327	0	0	multi-exon	FALSE	canonical	3	141	junction_4	16.5753974809925	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCCTTTCATGTTGC	14	True	NA	19	True	ATTAAA	-24	NA	45018661	45032365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUST00000133165.2	chr4	-	947	2	FSM	ENSMUSG00000029030.15	ENSMUST00000133165.2	947	2	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTGTTACGCTTTGGA	NA	False	NA	NA	False	NA	NA	NA	154245063	154244023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154244719_154244811
ENSMUST00000133181.2	chr18	-	4133	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAACGCCTTATT	NA	False	NA	NA	False	AATAAA	-41	NA	34784788	34764735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUST00000133181.2-0	chr18	-	3027	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	0	1106	0	889	multi-exon	FALSE	canonical	3	906	junction_9	78.8679909722569	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784788	34765841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUST00000133200.2	chr11	+	442	2	FSM	ENSMUSG00000020385.17	ENSMUST00000133200.2	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGGGATTGATAGGAGA	NA	False	NA	NA	False	ACTAAA	-30	NA	51153988	51158331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51154097_51157997
ENSMUST00000133218.2	chr1	-	936	3	FSM	ENSMUSG00000026526.15	ENSMUST00000133218.2	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_2	99	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTTTTTAAAATTTAATT	NA	False	NA	-16	True	AATAAA	-37	NA	175434213	175428943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_175429133_175431503_175431658_175433620
ENSMUST00000133266.2	chr2	+	4804	16	FSM	ENSMUSG00000027007.17	ENSMUST00000133266.2	4804	16	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	8.18290901819151	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAATTTATTTTTTGAG	NA	False	NA	19	True	AATAAA	-20	NA	79469525	79503310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ENSMUST00000133280.2	chr13	-	1609	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGATTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	104314947	104310229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104311513_104314621
ENSMUST00000133308.3	chr17	-	1479	7	FSM	ENSMUSG00000002076.13	ENSMUST00000133308.3	1479	7	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	334.770941590415	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253511	32165055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32165786_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ENSMUST00000133316.8	chr5	+	1031	6	FSM	ENSMUSG00000029177.10	ENSMUST00000133316.8	1031	6	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_2	579.285905231605	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGCGCTTGAATCT	9186	False	NA	9	True	AATATA	-14	NA	30824240	30831722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30824458_30827035_30827173_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUST00000133350.8	chrX	-	594	3	FSM	ENSMUSG00000085757.8	ENSMUST00000133350.8	594	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	27.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATGAGTTGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	61559675	61554144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_61554605_61558040_61558144_61559644
ENSMUST00000133396.2	chr2	-	717	2	FSM	ENSMUSG00000026972.16	ENSMUST00000133396.2	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGGTAGTGTGGACTG	9381	False	NA	NA	False	NA	NA	NA	24825200	24817295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24817852_24825039
ENSMUST00000133413.8	chr11	+	2537	3	FSM	ENSMUSG00000040599.14	ENSMUST00000133413.8	344	3	0	-2193	0	0	multi-exon	FALSE	canonical	3	36	junction_1	44	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910436	70918197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70910550_70915375_70915538_70915935
ENSMUST00000133425.2	chr4	-	2098	4	FSM	ENSMUSG00000039137.19	ENSMUST00000133425.2	797	4	-1301	0	-69	0	multi-exon	FALSE	canonical	3	16	junction_1	15.1070255914995	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGTAATGAAACTCACT	4409	False	NA	NA	False	AATAAA	-15	NA	63414297	63378399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_63378705_63379518_63379645_63390886_63391106_63412849
ENSMUST00000133426.8	chr11	-	3593	12	FSM	ENSMUSG00000020719.15	ENSMUST00000133426.8	3593	12	0	0	0	0	multi-exon	FALSE	canonical	3	3830	junction_7	165.368159266449	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9654	False	NA	-9	True	AATAAA	-45	NA	106679320	106672373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106673083_106673294_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUST00000133449.8	chr2	-	933	6	FSM	ENSMUSG00000085385.8	ENSMUST00000133449.8	933	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	32.8048776861003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCAACCCATGAATT	8289	False	NA	3	True	AATAAA	-32	NA	158203500	158197684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_158197962_158199117_158199184_158201101_158201252_158202383_158202520_158202862_158202991_158203324
ENSMUST00000133461.2	chr13	-	839	2	FSM	ENSMUSG00000021660.15	ENSMUST00000133461.2	839	2	0	0	0	0	multi-exon	FALSE	canonical	3	7051	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTATCATTTTACT	NA	False	NA	-18	True	AATAAA	-35	NA	98448023	98446405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98446710_98447488
ENSMUST00000133472.2	chrX	-	2199	2	FSM	ENSMUSG00000048949.9	ENSMUST00000133472.2	2199	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTTCCTGAAGTCAAAC	NA	False	NA	NA	False	NA	NA	NA	102209013	102206715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_102208081_102208179
ENSMUST00000133481.2	chrX	-	2553	8	FSM	ENSMUSG00000036572.17	ENSMUST00000133481.2	2553	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	43.5576090496534	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAACAAAGTAACA	NA	False	NA	NA	False	NA	NA	NA	36373975	36361102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ENSMUST00000133515.2	chr7	+	3477	3	FSM	ENSMUSG00000030386.20	ENSMUST00000133515.2	3477	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	3.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATGGAAACCTGGTTA	NA	False	NA	12	True	AATAAA	-16	NA	12223439	12229480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12223624_12223875_12223972_12226283
ENSMUST00000133530.8	chr4	-	646	4	FSM	ENSMUSG00000033379.14	ENSMUST00000133530.8	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	2536	junction_3	23.6690139681023	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGAGGCTTCTGTTGG	NA	False	NA	-5	True	AATAAA	-17	NA	117743091	117741526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000
ENSMUST00000133533.8	chr4	-	4752	12	FSM	ENSMUSG00000029026.18	ENSMUST00000133533.8	4752	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	6.38697020736374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTGACTATTGTAACTAA	NA	False	NA	NA	False	AATAAA	-16	NA	154181630	154140709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154181350
ENSMUST00000133533.8-0	chr4	-	2717	12	FSM	ENSMUSG00000029026.18	ENSMUST00000133533.8	4752	12	6	2029	0	230	multi-exon	FALSE	canonical	1	1	junction_11	6.38697020736374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTGGGGTCAGCTTGC	NA	False	NA	-2	True	GATAAA	-15	NA	154181624	154142738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154181350
ENSMUST00000133538.2	chr10	+	4314	3	FSM	ENSMUSG00000019897.9	ENSMUST00000133538.2	4314	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	58.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTGTAATAGAAGCGTT	NA	False	NA	NA	False	AATAAA	-18	NA	105676927	105683694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_105677517_105678402_105681311_105682877
ENSMUST00000133541.8	chr15	-	2582	7	FSM	ENSMUSG00000033055.13	ENSMUST00000133541.8	2582	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	6.51707159867238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTGGTTGTTGTTTTT	NA	False	NA	-10	True	NA	NA	NA	78947085	78937303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78938285_78938695_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
ENSMUST00000133544.8	chr2	+	4775	4	FSM	ENSMUSG00000026848.15	ENSMUST00000133544.8	4775	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACTTTCCTGAGCTTTTC	NA	False	NA	9	True	AATAAA	-14	NA	30842990	30849023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30843236_30843763_30845966_30846459_30846588_30846823
ENSMUST00000133547.2	chr14	+	2733	14	FSM	ENSMUSG00000021866.16	ENSMUST00000133547.2	2733	14	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_4	23.1322413898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	2	True	NA	26	True	AATAAA	-34	NA	25842606	25887228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ENSMUST00000133553.8	chr7	+	825	6	FSM	ENSMUSG00000030611.11	ENSMUST00000133553.8	825	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	143.488814895099	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTGAGTTTTTGTTC	NA	False	NA	3	True	AATAAA	-16	NA	78433103	78442737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78433172_78433320_78433435_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUST00000133574.8	chr17	-	3461	11	FSM	ENSMUSG00000023927.16	ENSMUST00000133574.8	3461	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	19.2429207762231	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTTGCAATGTGTCT	NA	False	NA	NA	False	AATAGA	-37	NA	52140318	52045921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52140190
ENSMUST00000133584.8	chr16	-	795	5	FSM	ENSMUSG00000023791.19	ENSMUST00000133584.8	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	143.179083667972	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGAGGGTTGAAAACGAG	NA	False	NA	NA	False	NA	NA	NA	31918514	31906113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31906326_31911161_31911304_31914370_31914527_31915817_31915882_31918293
ENSMUST00000133605.8	chr17	-	874	4	FSM	ENSMUSG00000023951.19	ENSMUST00000133605.8	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	71.0602248487546	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATCTGCTGCTAAATC	NA	False	NA	NA	False	NA	NA	NA	46335807	46329531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369
ENSMUST00000133615.2	chr2	-	3870	5	FSM	ENSMUSG00000027109.17	ENSMUST00000133615.2	3870	5	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	47.8924576525365	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGTTTGTTGTAGTCC	4045	False	NA	-6	True	AATAAA	-18	NA	72809630	72766995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241
ENSMUST00000133628.2	chr8	+	749	3	FSM	ENSMUSG00000031950.8	ENSMUST00000133628.2	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	2741	junction_2	84.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTGTTAGATGGCTAA	NA	False	NA	NA	False	GGGGCT	-23	NA	112667699	112679374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112667848_112669133_112669307_112678946
ENSMUST00000133667.2	chr5	-	654	3	FSM	ENSMUSG00000066551.13	ENSMUST00000133667.2	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	5649	junction_2	1488.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTAGAAATTGCTCAAAA	6788	False	NA	NA	False	NA	NA	NA	148989826	148986877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148987251_148987397_148987562_148989709
ENSMUST00000133673.8	chr2	-	1489	4	FSM	ENSMUSG00000013523.14	ENSMUST00000133673.8	688	4	0	-801	0	0	multi-exon	FALSE	canonical	3	7	junction_2	32.9983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGGTGGTTTTTTTTTT	NA	False	NA	1	True	AATAAA	-22	NA	170199033	170189063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_170190069_170191101_170191384_170198167_170198234_170198897
ENSMUST00000133677.8	chr1	-	935	7	FSM	ENSMUSG00000026049.12	ENSMUST00000133677.8	935	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	163.292596960861	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTTGGTTAATTTGAT	NA	False	NA	NA	False	AATAAA	-2	NA	44141583	44126019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139096_44141059_44141118_44141487
ENSMUST00000133683.8	chr8	-	632	4	FSM	ENSMUSG00000058833.12	ENSMUST00000133683.8	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	338.518340222013	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959076	70956944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70958941
ENSMUST00000133686.8	chr1	+	2341	5	FSM	ENSMUSG00000026456.19	ENSMUST00000133686.8	2341	5	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	47.3253367658382	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAATAAAAATAAGAAAA	8218	False	NA	NA	False	NA	NA	NA	134333765	134337737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141
ENSMUST00000133697.2	chr2	-	845	3	FSM	ENSMUSG00000026966.7	ENSMUST00000133697.2	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	398.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGCTAGCTACCA	NA	False	NA	-6	True	AATAAA	-16	NA	25162422	25161050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25161594_25161940_25162141_25162320
ENSMUST00000133736.2	chr15	-	1870	5	FSM	ENSMUSG00000022634.10	ENSMUST00000133736.2	1870	5	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_2	48.2875501552937	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGCATTTTGTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	93234816	93182161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_93183504_93184290_93184444_93215419_93215490_93234220_93234347_93234637
ENSMUST00000133737.8	chr2	-	1150	5	FSM	ENSMUSG00000026927.18	ENSMUST00000133737.8	1150	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	120.051030816066	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTTCTCTATGGAGAGC	NA	False	NA	NA	False	NA	NA	NA	26279318	26276666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ENSMUST00000133808.2	chr2	-	2483	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGAGTGATTGCTTACG	NA	False	NA	-6	True	ATTAAA	-19	NA	26030533	26026825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26028926_26030150
ENSMUST00000133826.2	chr13	-	569	4	FSM	ENSMUSG00000021660.15	ENSMUST00000133826.2	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	6398	junction_3	146.166571645731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAGGTTCAGAATTG	NA	False	NA	NA	False	NA	NA	NA	98453504	98449546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUST00000133852.2	chrX	+	6410	5	FSM	ENSMUSG00000041245.14	ENSMUST00000133852.2	6410	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	2.12132034355964	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATGTCACCTTATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	150077515	150103148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
ENSMUST00000133861.8	chr11	+	4153	21	FSM	ENSMUSG00000005417.18	ENSMUST00000133861.8	4153	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	114.923931363315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGTCTGCAGCATTTT	NA	False	NA	NA	False	NA	NA	NA	59618506	59667428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ENSMUST00000133895.8	chr4	+	363	3	FSM	ENSMUSG00000060206.12	ENSMUST00000133895.8	363	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGCATATTACCCCTAA	-13	True	NA	NA	False	NA	NA	NA	54945047	55008314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_54945102_55007532_55007783_55008255
ENSMUST00000133901.2	chr16	-	523	2	FSM	ENSMUSG00000022889.8	ENSMUST00000133901.2	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCTCATTAAAGTATTTT	NA	False	NA	NA	False	NA	NA	NA	84532118	84531055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84531502_84532041
ENSMUST00000133908.2	chr11	-	372	3	FSM	ENSMUSG00000025140.16	ENSMUST00000133908.2	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_2	113	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGGTAGGAGAGAGTGC	NA	False	NA	NA	False	NA	NA	NA	120534530	120533570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120533789_120533984_120534114_120534505
ENSMUST00000133925.8	chr8	-	2666	10	FSM	ENSMUSG00000031921.18	ENSMUST00000133925.8	2666	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	8.85688683705762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTCTAGCTGGTTCTTG	NA	False	NA	0	True	ATTAAA	-17	NA	107823177	107796031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803629_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ENSMUST00000133943.2	chr2	-	1137	6	FSM	ENSMUSG00000027379.15	ENSMUST00000133943.2	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	30.0759039764393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAATATTATTTCT	NA	False	NA	NA	False	GATAAA	-31	NA	127673724	127665367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ENSMUST00000133959.8	chr4	+	688	4	FSM	ENSMUSG00000039768.17	ENSMUST00000133959.8	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	865	junction_1	56.0079359456219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCCTTCATCATCCCAG	9113	False	NA	NA	False	NA	NA	NA	152018190	152041952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559
ENSMUST00000133965.8	chr3	+	1033	4	FSM	ENSMUSG00000028093.16	ENSMUST00000133965.8	1033	4	0	0	0	0	multi-exon	FALSE	canonical	3	1030	junction_1	86.140711758275	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGGTGTCAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	97066418	97074365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855
ENSMUST00000133967.8	chr11	+	421	4	FSM	ENSMUSG00000070394.11	ENSMUST00000133967.8	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	597.808404832927	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTGGTGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	69729339	69730439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69729400_69729745_69729778_69730013_69730095_69730191
ENSMUST00000133980.2	chrX	-	5362	6	FSM	ENSMUSG00000059708.13	ENSMUST00000133980.2	1370	6	-299	-3693	0	128	multi-exon	FALSE	canonical	3	34	junction_4	11.6687617166519	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAATAGTGACTATTGA	NA	False	NA	NA	False	AATAAA	-11	NA	35909048	35871838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35900125_35900228_35908702
ENSMUST00000134003.2	chr11	-	811	5	FSM	ENSMUSG00000018537.17	ENSMUST00000134003.2	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	91.4890703854838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACACTCTTTCTTCACT	NA	False	NA	NA	False	NA	NA	NA	97583235	97581353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97581868_97582509_97582602_97582683_97582739_97582852_97582962_97583194
ENSMUST00000134005.2	chrX	-	517	5	FSM	ENSMUSG00000031310.17	ENSMUST00000134005.2	517	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	48.2208461145177	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTCGCATGTCCCTGC	NA	False	NA	NA	False	NA	NA	NA	100463466	100459988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100460068_100460514_100460588_100460892_100460937_100462400_100462559_100463303
ENSMUST00000134041.8	chr12	+	787	4	FSM	ENSMUSG00000005078.17	ENSMUST00000134041.8	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_2	87.7812938817579	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTTCATGACGAAAAG	NA	False	NA	NA	False	NA	NA	NA	72135937	72141641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_72136181_72136729_72136885_72140710_72140918_72141459
ENSMUST00000134049.2	chr19	-	692	2	FSM	ENSMUSG00000037916.15	ENSMUST00000134049.2	692	2	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTGTTATGGATCGCT	9960	False	NA	NA	False	NA	NA	NA	4059140	4058364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4058510_4058593
ENSMUST00000134053.8	chr9	-	1905	10	FSM	ENSMUSG00000032786.17	ENSMUST00000134053.8	1905	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	56.0801894996886	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATCTATAGTAAAATCATA	6258	False	NA	-29	True	AATAAA	-16	NA	106120833	106111140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106120753
ENSMUST00000134070.2	chr7	-	891	2	FSM	ENSMUSG00000030541.17	ENSMUST00000134070.2	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	2265	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACATCTTCCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	79748887	79747913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79748663_79748745
ENSMUST00000134080.2	chr13	-	1075	5	FSM	ENSMUSG00000041431.17	ENSMUST00000134080.2	1075	5	0	0	0	0	multi-exon	FALSE	canonical	3	3352	junction_4	271.501726513847	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTTGCTCTTCAATA	NA	False	NA	-50	True	NA	NA	NA	100918541	100916116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132
ENSMUST00000134086.2	chr2	+	1380	2	FSM	ENSMUSG00000068264.12	ENSMUST00000134086.2	868	2	0	-512	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052289	131055434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131052602_131054366
ENSMUST00000134101.8	chr2	+	812	5	FSM	ENSMUSG00000027374.13	ENSMUST00000134101.8	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	81.6160982894919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTGCATCATAGAAAAC	4164	False	NA	NA	False	AATAAA	-15	NA	127429338	127437977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583
ENSMUST00000134102.2	chr11	-	3550	9	FSM	ENSMUSG00000020802.9	ENSMUST00000134102.2	3550	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	61.6699886492612	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGGGGGAGTTGGC	NA	False	NA	1	True	ATTAAA	-19	NA	116434843	116428565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434554_116434691
ENSMUST00000134109.2	chr14	+	801	2	FSM	ENSMUSG00000022010.20	ENSMUST00000134109.2	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGGAGGGGAATGGGA	6591	False	NA	NA	False	NA	NA	NA	76741969	76743177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76742282_76742688
ENSMUST00000134115.8	chr1	+	3268	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	0	0	0	0	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTGTTCTATTGCTTG	NA	False	NA	NA	False	NA	NA	NA	180978495	180996559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ENSMUST00000134115.8-0	chr1	+	655	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	0	2613	0	0	multi-exon	FALSE	canonical	3	1843	junction_1	136.918543302213	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTGAGTTTTTGTAGA	NA	False	NA	3	True	CATAAA	-14	NA	180978495	180993946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ENSMUST00000134132.2	chr6	-	636	2	FSM	ENSMUSG00000014551.9	ENSMUST00000134132.2	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGCTCTCCTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	92160952	92155293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92155798_92160820
ENSMUST00000134159.3	chr4	-	2113	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCCAGGCTGATGC	NA	False	NA	NA	False	AATAAA	-17	NA	130253736	130209175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ENSMUST00000134159.3-1	chr4	-	1594	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	0	519	0	377	multi-exon	FALSE	canonical	3	221	junction_6	38.5094740529747	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGCTTTCCCTTGTATT	NA	False	NA	-1	True	CATAAA	-19	NA	130253736	130209694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ENSMUST00000134176.8	chr7	-	1189	7	FSM	ENSMUSG00000030590.16	ENSMUST00000134176.8	1189	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	138.986410206978	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855608	28851936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28852273_28852746_28852915_28853843_28853957_28854040_28854119_28854576_28854783_28855099_28855235_28855455
ENSMUST00000134184.2	chr1	+	730	4	FSM	ENSMUSG00000026111.16	ENSMUST00000134184.2	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_2	19.4307888557196	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGGAACAGGTGGTGTG	NA	False	NA	NA	False	NA	NA	NA	37470424	37476693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_37470658_37471631_37471753_37476242_37476383_37476457
ENSMUST00000134188.8	chr16	-	3267	14	FSM	ENSMUSG00000033581.18	ENSMUST00000134188.8	3267	14	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_2	86.6332813864682	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21907868	21877823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811
ENSMUST00000134218.2	chr2	+	991	3	FSM	ENSMUSG00000038375.16	ENSMUST00000134218.2	991	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	37	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTACCCCTCCCGCCT	4429	False	NA	NA	False	NA	NA	NA	155224121	155227888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155224850_155227209_155227385_155227800
ENSMUST00000134261.2	chr4	-	1141	6	FSM	ENSMUSG00000055401.15	ENSMUST00000134261.2	811	6	0	-330	0	0	multi-exon	FALSE	canonical	3	174	junction_5	248.50786707869	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGTTTGAGGGCTTAC	NA	False	NA	-18	True	AATAAA	-16	NA	148236382	148230244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
ENSMUST00000134272.2	chrX	-	803	4	FSM	ENSMUSG00000040749.12	ENSMUST00000134272.2	803	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	219.75794765049	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAACTTACATGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	162859489	162854880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859182
ENSMUST00000134293.2	chr11	-	1207	8	FSM	ENSMUSG00000042302.15	ENSMUST00000134293.2	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	7.43406390357582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGACCTGTAGACATGA	NA	False	NA	NA	False	GATAAA	-34	NA	22235872	22096531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ENSMUST00000134299.8	chr8	+	944	4	FSM	ENSMUSG00000019428.17	ENSMUST00000134299.8	944	4	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_2	26.0298973404728	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCCAACCTGTGCTCCC	NA	False	NA	NA	False	NA	NA	NA	70984770	70987621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUST00000134309.6	chr5	+	3975	14	FSM	ENSMUSG00000015880.14	ENSMUST00000134309.6	3975	14	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_1	45.7117285844401	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATACTCAGTATTTAT	NA	False	NA	18	True	ATTAAA	-25	NA	45833354	45857469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853887_45856182_45856253_45857189
ENSMUST00000134327.2	chr1	+	726	6	FSM	ENSMUSG00000026127.14	ENSMUST00000134327.2	726	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_5	51.9746091856399	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCAAAAGACGACAGCCAT	5699	False	NA	NA	False	NA	NA	NA	34479017	34483108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077
ENSMUST00000134335.2	chr11	-	1320	2	FSM	ENSMUSG00000020935.9	ENSMUST00000134335.2	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGAATTCCACTTGGC	8777	False	NA	-7	True	NA	NA	NA	102888374	102884874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102885999_102888178
ENSMUST00000134345.2	chr11	+	449	2	FSM	ENSMUSG00000085148.2	ENSMUST00000134345.2	449	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGGCAGTGGGAAG	3943	False	NA	NA	False	TATAAA	-41	NA	75352469	75354855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75352582_75354518
ENSMUST00000134351.2	chr2	-	793	4	FSM	ENSMUSG00000002550.17	ENSMUST00000134351.2	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	14.0791413879619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCGGTATTGCCTTTATG	NA	False	NA	NA	False	NA	NA	NA	32150073	32148107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32148197_32148288_32148680_32149591_32149752_32149920
ENSMUST00000134362.8	chr2	+	1060	6	FSM	ENSMUSG00000006494.12	ENSMUST00000134362.8	1060	6	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_5	17.7426040929735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAATACTAAGAA	NA	False	NA	NA	False	NA	NA	NA	71703669	71716656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325
ENSMUST00000134412.2	chr2	+	3105	2	FSM	ENSMUSG00000074884.13	ENSMUST00000134412.2	3105	2	0	0	0	0	multi-exon	FALSE	canonical	3	5931	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGAGCATTCTGGGT	NA	False	NA	3	True	NA	NA	NA	121279848	121283486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121279923_121280455
ENSMUST00000134416.2	chr4	+	2834	2	FSM	ENSMUSG00000086788.3	ENSMUST00000134416.2	1002	2	-119	-1713	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGCAATCATTAAGA	NA	False	NA	NA	False	NA	NA	NA	135353965	135357509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135354357_135355066
ENSMUST00000134425.8	chr7	-	660	4	FSM	ENSMUSG00000061787.16	ENSMUST00000134425.8	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	12924	junction_1	185.347121789241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAGTTTGTCTGTATT	NA	False	NA	-17	True	AATAAA	-5	NA	80994982	80992487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604
ENSMUST00000134433.8	chr9	+	2499	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_5	18.3734409769464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGTGTTCTTTTTAAC	9665	False	NA	NA	False	AATAAA	-17	NA	117869646	117889552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
ENSMUST00000134462.8	chr7	-	1372	7	FSM	ENSMUSG00000053291.16	ENSMUST00000134462.8	1372	7	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	25.5451669705946	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCGGCCTCTGTCATT	NA	False	NA	-4	True	CATAAA	-16	NA	26878240	26867851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26878151
ENSMUST00000134465.8	chr9	-	5244	20	FSM	ENSMUSG00000048537.17	ENSMUST00000134465.8	5244	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	12.3759215779289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGAGTGTGGAAGTCTG	9464	False	NA	-2	True	AATAAA	-16	NA	44639397	44597606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316
ENSMUST00000134473.2	chr5	+	3884	2	FSM	ENSMUSG00000079215.9	ENSMUST00000134473.2	3884	2	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATGTTTCCTGTGTGGT	NA	False	NA	8	True	NA	NA	NA	124961632	124965694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124961837_124962014
ENSMUST00000134479.8	chr19	-	1438	9	FSM	ENSMUSG00000037916.15	ENSMUST00000134479.8	1438	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	478.184326384711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAACTTTGCTTTTC	6566	False	NA	3	True	AATAAA	-30	NA	4062666	4057496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4062550
ENSMUST00000134480.8	chr2	-	1302	8	FSM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-30	-469	0	0	multi-exon	FALSE	canonical	3	69	junction_6	199.415574689068	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186729	50169892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263_50186322_50186654
ENSMUST00000134492.2	chr4	-	1570	3	FSM	ENSMUSG00000029030.15	ENSMUST00000134492.2	915	3	0	-655	0	0	multi-exon	FALSE	canonical	3	8	junction_1	369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	-3	True	AGTAAA	-16	NA	154245123	154241941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154243023_154244541_154244719_154244811
ENSMUST00000134503.8	chr10	+	2140	14	FSM	ENSMUSG00000006345.11	ENSMUST00000134503.8	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	59.3897965057474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTCTTGTGTATGA	NA	False	NA	36	True	NA	NA	NA	75404489	75422034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75404605_75409444_75409583_75410062_75410231_75411783_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUST00000134518.8	chr19	+	3231	3	FSM	ENSMUSG00000024817.14	ENSMUST00000134518.8	3231	3	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	21.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAACAACAG	4085	False	NA	NA	False	AATAAA	-15	NA	30007912	30036212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_30008332_30016463_30016698_30033634
ENSMUST00000134527.3	chr11	-	1540	2	FSM	ENSMUSG00000085156.9	ENSMUST00000134527.3	1540	2	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCACTGTCTCCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	6478763	6477050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6478375_6478547
ENSMUST00000134542.2	chr13	-	780	5	FSM	ENSMUSG00000021660.15	ENSMUST00000134542.2	780	5	0	0	0	0	multi-exon	FALSE	canonical	3	5972	junction_2	394.186821190156	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAATAAAGTTTGGAAAG	NA	False	NA	-62	True	AATAAA	-13	NA	98452884	98446449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737
ENSMUST00000134575.8	chr3	+	1644	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAACTTAGCATCTTGT	NA	False	NA	3	True	ATTAAA	-17	NA	145643796	145650582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
ENSMUST00000134575.8-0	chr3	+	1059	4	FSM	ENSMUSG00000036873.14	ENSMUST00000134575.8	1644	4	0	585	0	0	multi-exon	FALSE	canonical	3	101	junction_2	61.937244225282	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGATGATCATGGAAATAA	NA	False	NA	-10	True	NA	NA	NA	145643796	145649997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649551
ENSMUST00000134585.8	chr11	+	2377	5	FSM	ENSMUSG00000018666.14	ENSMUST00000134585.8	2377	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	281.892155797213	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441
ENSMUST00000134611.4	chr2	-	1017	5	FSM	ENSMUSG00000017307.17	ENSMUST00000134611.4	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	121.847240428333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACCTTTAATAGAACTA	8167	False	NA	2	True	AATAAA	-22	NA	164646801	164634684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164646609
ENSMUST00000134614.8	chr2	+	3515	4	FSM	ENSMUSG00000078872.10	ENSMUST00000134614.8	973	4	0	-2542	0	2229	multi-exon	FALSE	canonical	3	47	junction_1	50.9313263129874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	176772048	176781369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_176772113_176776035_176776163_176776368_176776430_176778106
ENSMUST00000134617.2	chr11	-	471	1	FSM	ENSMUSG00000085342.2	ENSMUST00000134617.2	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTAGAGCAGAGTTGGA	NA	False	NA	NA	False	NA	NA	NA	58400087	58399616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58399600_58400100
ENSMUST00000134628.2	chr1	+	964	2	FSM	ENSMUSG00000073676.5	ENSMUST00000134628.2	964	2	0	0	0	0	multi-exon	FALSE	canonical	3	8585	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAATAAGGCACAGAACT	NA	False	NA	NA	False	GATAAA	-35	NA	55127472	55129074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_55127572_55128209
ENSMUST00000134631.8	chr15	-	786	5	FSM	ENSMUSG00000064284.13	ENSMUST00000134631.8	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	144.324937207677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCTCCTTTGATTGAC	8128	False	NA	NA	False	NA	NA	NA	85695855	85691400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695043_85695250_85695839
ENSMUST00000134637.8	chr6	+	1917	5	FSM	ENSMUSG00000023505.14	ENSMUST00000134637.8	1917	5	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_1	91.4969261778777	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTCATGATCTTTCCC	1362	False	NA	NA	False	CATAAA	-25	NA	124807197	124810495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124807237_124807465_124807614_124808324_124809403_124809528_124809633_124809947
ENSMUST00000134641.8	chr2	-	3136	12	FSM	ENSMUSG00000009207.16	ENSMUST00000134641.8	2120	12	-17	-999	0	0	multi-exon	FALSE	canonical	2	13	junction_8	78.2650719516906	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTTATTTTTATTTT	NA	False	NA	-14	True	ATTAAA	-43	NA	74409292	74350677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ENSMUST00000134644.8	chr2	-	3438	26	FSM	ENSMUSG00000033526.17	ENSMUST00000134644.8	3438	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_25	24.9560894372496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCATGAGTCCAGGAA	NA	False	NA	NA	False	NA	NA	NA	121185558	121162553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185516
ENSMUST00000134657.3	chr6	+	649	3	FSM	ENSMUSG00000030264.15	ENSMUST00000134657.3	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	355.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTGTTGTTGTTTT	NA	False	NA	28	True	ATTAAA	-22	NA	113024375	113027998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113024666_113026299_113026378_113027717
ENSMUST00000134660.8	chr11	-	4063	18	FSM	ENSMUSG00000020538.16	ENSMUST00000134660.8	4063	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	106.245065018713	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACACAATCTTCAGTGT	8520	False	NA	NA	False	AATAAA	-21	NA	60098014	60089914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663
ENSMUST00000134661.8	chr2	+	4602	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTCACCCTCA	NA	False	NA	NA	False	AATAAA	-7	NA	118644483	118668177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUST00000134661.8-0	chr2	+	1319	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	229	3054	0	0	multi-exon	FALSE	canonical	3	391	junction_3	12.8038080273019	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATATTCTGACTAACAC	NA	False	NA	21	True	AATAAA	-14	NA	118644712	118665123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUST00000134674.8	chr9	+	3106	16	FSM	ENSMUSG00000031918.17	ENSMUST00000134674.8	3106	16	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	100.823057327622	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13660492	13717777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_13660697_13693572_13693679_13694901_13695007_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUST00000134732.8	chr11	-	1744	13	FSM	ENSMUSG00000018669.15	ENSMUST00000134732.8	2201	13	67	390	0	0	multi-exon	FALSE	canonical	3	10	junction_9	315.392733570209	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUST00000134745.8	chr11	+	1522	5	FSM	ENSMUSG00000020849.14	ENSMUST00000134745.8	599	5	0	-923	0	-299	multi-exon	FALSE	canonical	0	0	junction_3	4641.68485035337	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3035	False	NA	-16	True	NA	NA	NA	75623738	75656372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75623918_75642706_75642907_75646399_75646479_75650117_75650255_75655445
ENSMUST00000134751.8	chr4	-	478	4	FSM	ENSMUSG00000028964.15	ENSMUST00000134751.8	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	5627	junction_3	104.487107125978	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGGCAGTGAGTGTCTC	NA	False	NA	NA	False	NA	NA	NA	150994325	150989582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUST00000134759.3	chr2	+	1883	2	FSM	ENSMUSG00000002728.15	ENSMUST00000134759.3	1883	2	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTCTGCTCACTTCAGT	NA	False	NA	NA	False	NA	NA	NA	145745213	145752324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_145745283_145750510
ENSMUST00000134775.3	chr2	-	1971	9	FSM	ENSMUSG00000036893.18	ENSMUST00000134775.3	1971	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	89.061425432114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAACAAAATGATTT	NA	False	NA	NA	False	AATAAA	-25	NA	24696367	24681154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695093_24695254_24696225
ENSMUST00000134781.8	chr4	-	1607	7	FSM	ENSMUSG00000028857.17	ENSMUST00000134781.8	613	7	-152	-842	0	0	multi-exon	FALSE	canonical	3	22	junction_5	347.535609686259	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133005081	132993355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132997980_132998126_132998273_132998359_133004841
ENSMUST00000134789.2	chr2	+	1407	5	FSM	ENSMUSG00000027091.15	ENSMUST00000134789.2	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_1	80.8223360216716	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	False	NA	28	True	AATAAA	-36	NA	83490353	83494966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUST00000134793.2	chr6	-	719	4	FSM	ENSMUSG00000030002.16	ENSMUST00000134793.2	719	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.397635111517	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATACTTGGGGCTTCTC	7380	False	NA	NA	False	NA	NA	NA	85938589	85932045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85932387_85935565_85935698_85936197_85936274_85938419
ENSMUST00000134794.8	chr2	+	1781	5	FSM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	-51	1841	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.3490462967425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTGTTTTCCACTTAT	4712	False	NA	NA	False	AATAAA	-39	NA	12928851	13006425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ENSMUST00000134816.2	chr16	+	776	2	FSM	ENSMUSG00000022884.17	ENSMUST00000134816.2	776	2	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTCAGGTTTCACAACT	6053	False	NA	NA	False	NA	NA	NA	22926507	22928050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22926571_22927337
ENSMUST00000134821.2	chr19	-	2305	4	FSM	ENSMUSG00000024944.7	ENSMUST00000134821.2	2305	4	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	55.8091987638836	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTGTGAGTCACTGAC	NA	False	NA	1	True	AATAAA	-27	NA	6191170	6184403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6184832_6186008_6187671_6187759_6187871_6191066
ENSMUST00000134822.8	chr8	+	2753	8	FSM	ENSMUSG00000055681.15	ENSMUST00000134822.8	2753	8	0	0	0	0	multi-exon	FALSE	canonical	3	1283	junction_7	34.9203174588744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATACCCACCAGGC	703	False	NA	29	True	AATAAA	-18	NA	70755418	70765643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70755583_70757283_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUST00000134824.9	chr11	+	896	4	FSM	ENSMUSG00000018379.18	ENSMUST00000134824.9	896	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	671.045453005979	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACATTTTTTAAAAAACG	7444	False	NA	3	True	NA	NA	NA	87939392	87942298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87939501_87939868_87940042_87940802_87940922_87941802
ENSMUST00000134840.8	chr1	-	1120	8	FSM	ENSMUSG00000026189.14	ENSMUST00000134840.8	1120	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	115.181666625078	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTTAAGGATTATTTA	NA	False	NA	-1	True	AATAAA	-24	NA	72323418	72298325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72314811_72314962_72316445_72316580_72323251
ENSMUST00000134844.2	chr4	+	2917	23	FSM	ENSMUSG00000028582.15	ENSMUST00000134844.2	2917	23	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	47.2028329448194	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATGTAGCCATTTTTA	1542	False	NA	13	True	NA	NA	NA	108480759	108491320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483234_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ENSMUST00000134851.3	chr6	-	1795	3	FSM	ENSMUSG00000030057.16	ENSMUST00000134851.3	985	3	29	-839	0	-79	multi-exon	FALSE	canonical	3	10734	junction_2	536.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTTTGTTTGTTTTAA	NA	False	NA	-25	True	AATAAA	-31	NA	87828012	87820142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87821139_87822103_87822776_87827885
ENSMUST00000134854.8	chr4	-	2847	4	FSM	ENSMUSG00000028809.17	ENSMUST00000134854.8	2847	4	0	0	0	0	multi-exon	FALSE	canonical	3	1232	junction_3	55.3955473541571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGACAAAG	NA	False	NA	NA	False	NA	NA	NA	135080462	135070947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135071291_135071809_135074169_135074425_135074516_135080407
ENSMUST00000134862.8	chr13	-	3797	11	FSM	ENSMUSG00000034928.17	ENSMUST00000134862.8	3797	11	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_7	149.659480154115	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54841720	54827222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ENSMUST00000134881.2	chr5	+	1039	5	FSM	ENSMUSG00000025825.13	ENSMUST00000134881.2	489	5	-222	-328	0	0	multi-exon	FALSE	canonical	3	53	junction_1	300.515390620847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGTACTGAACCTGA	3650	False	NA	NA	False	AATAAA	-15	NA	113910863	113916334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_113911158_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ENSMUST00000134892.8	chr3	-	985	8	FSM	ENSMUSG00000027752.16	ENSMUST00000134892.8	985	8	0	0	0	0	multi-exon	FALSE	canonical	3	1829	junction_4	137.209805087847	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTCAATTTAAAGAAGAAA	NA	False	NA	NA	False	TATAAA	-21	NA	54642223	54637261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716
ENSMUST00000134905.2	chr2	+	2233	2	FSM	ENSMUSG00000026977.18	ENSMUST00000134905.2	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGATGCTAA	NA	False	NA	NA	False	NA	NA	NA	60067231	60073480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_60067271_60071286
ENSMUST00000134908.2	chr2	-	406	2	FSM	ENSMUSG00000026987.17	ENSMUST00000134908.2	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTTAATTGACTTCTG	9203	False	NA	NA	False	AATAAA	-16	NA	60040092	60036937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60037308_60040056
ENSMUST00000134949.8	chr9	+	3394	9	FSM	ENSMUSG00000038145.18	ENSMUST00000134949.8	1664	9	-47	-1683	0	597	multi-exon	FALSE	canonical	2	2	junction_3	11.6833214455479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8253	False	NA	NA	False	NA	NA	NA	121946365	121997138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121946474_121960958_121961009_121961693_121961817_121963052_121963143_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ENSMUST00000134951.2	chr11	-	597	3	FSM	ENSMUSG00000038615.18	ENSMUST00000134951.2	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	666.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGCCTTCTATCTCCT	NA	False	NA	NA	False	NA	NA	NA	96713551	96712171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96712236_96712929_96713146_96713234
ENSMUST00000134962.2	chr16	-	4526	5	FSM	ENSMUSG00000022822.17	ENSMUST00000134962.2	4526	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	11.3578166916005	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGTATTTACTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	20245074	20219509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUST00000134964.8	chr2	+	4668	24	FSM	ENSMUSG00000027312.15	ENSMUST00000134964.8	4668	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_19	8.8774474779639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAAGGAGGGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	130748420	130847335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367
ENSMUST00000134991.8	chr5	+	4115	21	FSM	ENSMUSG00000056004.17	ENSMUST00000134991.8	4115	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.3685438564654	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACCTTTGTGTTTATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	9316131	9513983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_9316457_9430277_9430399_9449180_9449377_9460583_9460732_9467984_9468072_9470616_9470723_9471504_9471658_9472301_9472391_9477689_9477871_9478404_9478534_9484620_9484712_9485326_9485430_9487705_9487844_9490719_9490984_9491633_9491808_9495363_9495554_9496893_9496991_9497719_9497822_9509179_9509307_9511321_9511501_9512868
ENSMUST00000135003.2	chr4	-	5799	24	FSM	ENSMUSG00000042446.17	ENSMUST00000135003.2	5799	24	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	69.4449231657518	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126816941	126755731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794542_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856
ENSMUST00000135012.2	chrX	+	332	2	FSM	ENSMUSG00000009995.18	ENSMUST00000135012.2	332	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGATCCTTCTCCTGAG	NA	False	NA	NA	False	NA	NA	NA	73325517	73326521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73325652_73326323
ENSMUST00000135017.2	chr3	+	1089	7	FSM	ENSMUSG00000005687.15	ENSMUST00000135017.2	1405	7	-23	339	0	0	multi-exon	FALSE	canonical	3	101	junction_2	1366.36225268249	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5023	False	NA	48	True	AATAAA	-16	NA	103079064	103086143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103079182_103079263_103079357_103080549_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUST00000135024.2	chr4	-	3835	2	FSM	ENSMUSG00000008575.18	ENSMUST00000135024.2	3835	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAAAAAAATATTTATA	NA	False	NA	NA	False	AAGAAA	-28	NA	82424016	82414220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_82417007_82422967
ENSMUST00000135037.8	chr11	+	901	2	FSM	ENSMUSG00000087497.8	ENSMUST00000135037.8	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTTCATGTTTCTTA	4234	False	NA	NA	False	AATAAA	-22	NA	63970309	63974085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_63970604_63973478
ENSMUST00000135043.8	chr3	-	2979	10	FSM	ENSMUSG00000028020.17	ENSMUST00000135043.8	2979	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	12.952906151817	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTCTTTACTGCTATG	NA	False	NA	-11	True	ATTAAA	-22	NA	80820921	80750905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787036_80819274_80819426_80820823
ENSMUST00000135049.2	chr2	+	4167	3	FSM	ENSMUSG00000026755.15	ENSMUST00000135049.2	4167	3	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_2	32	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGGCTTCAAAAGTCATC	NA	False	NA	8	True	AATAAA	-19	NA	38900029	38905889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_38903200_38903734_38903912_38905069
ENSMUST00000135052.8	chr8	+	1929	5	FSM	ENSMUSG00000074247.11	ENSMUST00000135052.8	1929	5	0	0	0	0	multi-exon	FALSE	canonical	2	81	junction_1	303.826739277503	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	False	NA	13	True	NA	NA	NA	71921842	71928742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71921970_71924684_71924762_71924838_71924891_71926418_71926481_71927131
ENSMUST00000135074.2	chr2	+	4780	24	FSM	ENSMUSG00000062646.13	ENSMUST00000135074.2	4780	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	3.61680597271051	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCATGGTCTTTGCT	NA	False	NA	10	True	NA	NA	NA	120235248	120292181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ENSMUST00000135088.9	chr12	-	2197	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_5	274.352328220484	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCTGGTATTAGAAT	NA	False	NA	-12	True	AATAAA	-18	NA	21467638	21440071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ENSMUST00000135091.2	chr2	-	800	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACCAAAGCCTTGGTT	NA	False	NA	-5	True	GATAAA	-14	NA	127634408	127633307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127633753_127634053
ENSMUST00000135091.2-0	chr2	-	442	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	0	358	0	-358	multi-exon	FALSE	canonical	3	537	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATCTTTTTCCTCCTC	NA	False	NA	-11	True	AATAAA	-13	NA	127634408	127633665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_127633753_127634053
ENSMUST00000135107.4	chrX	-	2065	1	FSM	ENSMUSG00000045179.10	ENSMUST00000135107.4	2065	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGAGTCCTGATAATTT	NA	False	NA	0	True	AATAAA	-15	NA	59937036	59934971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_59935000_59937000
ENSMUST00000135123.3	chr17	-	1476	4	FSM	ENSMUSG00000024007.16	ENSMUST00000135123.3	1476	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	716.343182808042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGTGGTCTAGTAT	9927	False	NA	-28	True	AATAAA	-19	NA	29482922	29469805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29470700_29471223_29471293_29480710_29481147_29482845
ENSMUST00000135124.8	chr11	+	621	3	FSM	ENSMUSG00000020456.18	ENSMUST00000135124.8	621	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	320.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGCCCCACCGGGCACT	NA	False	NA	NA	False	NA	NA	NA	6242171	6263818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6242514_6246951_6247200_6263787
ENSMUST00000135131.2	chr12	-	1563	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.784519460427	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGGGATCTGCCTGGT	NA	False	NA	-9	True	NA	NA	NA	110945429	110942862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
ENSMUST00000135136.8	chr17	-	943	4	FSM	ENSMUSG00000034647.16	ENSMUST00000135136.8	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.5734237050888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTTTTTAGGAAATTA	NA	False	NA	NA	False	AATAAA	-30	NA	66384034	66344133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66344635_66356780_66356929_66359948_66360087_66383878
ENSMUST00000135148.2	chr11	-	562	4	FSM	ENSMUSG00000018921.12	ENSMUST00000135148.2	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	310.061284264901	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCAGATCTTTTAAGTG	NA	False	NA	NA	False	NA	NA	NA	70300857	70293456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70293580_70296452_70296559_70297082_70297148_70300589
ENSMUST00000135151.3	chr6	+	3057	3	FSM	ENSMUSG00000052751.17	ENSMUST00000135151.3	3057	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	9.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570833	48576015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48570987_48571795_48571911_48573226
ENSMUST00000135155.2	chr2	+	439	2	FSM	ENSMUSG00000026926.15	ENSMUST00000135155.2	439	2	0	0	0	0	multi-exon	FALSE	canonical	3	1702	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGGCATTTTCGGTCAG	659	False	NA	NA	False	NA	NA	NA	26279365	26280307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26279445_26279947
ENSMUST00000135158.9	chr10	-	6108	4	FSM	ENSMUSG00000057337.14	ENSMUST00000135158.9	6108	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCTGTAGTGGTTAT	NA	False	NA	NA	False	AATGAA	-7	NA	60055082	60017353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_60022706_60023894_60024141_60029914_60030068_60054725
ENSMUST00000135166.8	chr13	-	2416	9	FSM	ENSMUSG00000057554.14	ENSMUST00000135166.8	2416	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	24.8391701753501	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAATACTCTCTGGAAT	NA	False	NA	-14	True	ATTAAA	-17	NA	12476387	12454298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12476307
ENSMUST00000135192.8	chr1	+	4622	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	0	0	0	0	multi-exon	FALSE	canonical	1	295	junction_11	137.915678495956	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTTGCCGTTTCC	2764	False	NA	10	True	AATAAA	-15	NA	171910095	171949892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUST00000135222.9	chr1	+	2297	8	FSM	ENSMUSG00000070644.14	ENSMUST00000135222.9	2297	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	9.79379228628721	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTTGGGATCTGATTAG	NA	False	NA	25	True	ATTAAA	-35	NA	133291309	133308074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_133291757_133293313_133293574_133296487_133296611_133300872_133301016_133302264_133302349_133304643_133304790_133306186_133306261_133307054
ENSMUST00000135225.8	chr5	-	4310	27	FSM	ENSMUSG00000062234.15	ENSMUST00000135225.8	4310	27	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_23	73.3495017589351	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777605	108717279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ENSMUST00000135241.8	chr1	+	1461	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_7	26.2336440784092	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAAGGCTGCAGGT	NA	False	NA	116	True	AATAAA	-21	NA	162398158	162422934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ENSMUST00000135243.3	chr7	-	3195	9	FSM	ENSMUSG00000036427.6	ENSMUST00000135243.3	3195	9	0	0	0	0	multi-exon	FALSE	canonical	3	1605	junction_5	199.218433823279	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33909802	33901583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674
ENSMUST00000135269.8	chr8	-	2461	6	FSM	ENSMUSG00000031601.17	ENSMUST00000135269.8	2461	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	206.645203186524	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATATGGTTGTGACTG	NA	False	NA	-8	True	AATAAA	-16	NA	40964759	40945587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_40947157_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ENSMUST00000135275.8	chr13	+	2123	15	FSM	ENSMUSG00000021699.18	ENSMUST00000135275.8	2123	15	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	7.84544583871199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTTTTTTTGGTTT	NA	False	NA	NA	False	CATAAA	-12	NA	109769313	110087898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ENSMUST00000135298.8	chr9	+	12198	43	FSM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	14.12370436335	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGGTTTGTTTTCTG	555	False	NA	12	True	ATTAAA	-24	NA	59658178	59836149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ENSMUST00000135310.8	chr9	-	4413	9	FSM	ENSMUSG00000036986.17	ENSMUST00000135310.8	4413	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	114.3314807916	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCTAACATTCTGATT	2204	False	NA	-11	True	AGTAAA	-13	NA	58157016	58125368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUST00000135338.3	chr9	+	4083	5	FSM	ENSMUSG00000086596.3	ENSMUST00000135338.3	4083	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAAATGTATTGAATTTC	NA	False	NA	NA	False	AATAAA	-19	NA	113886207	113927796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_113886713_113893023_113893202_113897824_113897944_113911488_113911678_113924704
ENSMUST00000135344.8	chr5	+	3057	20	FSM	ENSMUSG00000004952.14	ENSMUST00000135344.8	3057	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	10.66669552166	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATGCTGAGGTGTTGGG	2234	False	NA	NA	False	AATAAA	-15	NA	136112851	136140709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ENSMUST00000135345.2	chr5	+	632	2	FSM	ENSMUSG00000041453.13	ENSMUST00000135345.2	632	2	0	0	0	0	multi-exon	FALSE	canonical	3	8667	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146772015	146772796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146772525_146772673
ENSMUST00000135383.9	chr11	+	2511	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	117	1436	0	0	multi-exon	FALSE	canonical	3	81	junction_11	10.2772224737595	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAAAAGGTGCTTCT	NA	False	NA	6	True	CATAAA	-13	NA	118367771	118378599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ENSMUST00000135387.2	chr6	+	1151	3	FSM	ENSMUSG00000029833.18	ENSMUST00000135387.2	1151	3	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	33	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCCACCTTTTGGATTT	NA	False	NA	NA	False	NA	NA	NA	37925493	37930565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_37926334_37928386_37928561_37930428
ENSMUST00000135388.3	chr15	+	2827	12	FSM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	32.5360575565374	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCATGTGTCTCACT	NA	False	NA	22	True	GATAAA	-17	NA	76555846	76579119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ENSMUST00000135389.8	chrX	+	898	5	FSM	ENSMUSG00000031403.15	ENSMUST00000135389.8	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	722.092921652054	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTCCCATGAGGTGGTA	NA	False	NA	NA	False	NA	NA	NA	74139704	74142403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368
ENSMUST00000135402.4	chr19	-	2043	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAATCAACAGTGTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	53933058	53918291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
ENSMUST00000135402.4-0	chr19	-	745	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	149	1149	0	0	multi-exon	FALSE	canonical	3	76	junction_3	53.0806514236172	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	AATAAA	-17	NA	53932909	53919440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
ENSMUST00000135417.2	chr15	-	2412	2	FSM	ENSMUSG00000058600.14	ENSMUST00000135417.2	2412	2	0	0	0	0	multi-exon	FALSE	canonical	3	5662	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	423	False	NA	-20	True	AATAAA	-27	NA	34443306	34440650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34442927_34443170
ENSMUST00000135421.8	chr12	-	1407	4	FSM	ENSMUSG00000073164.12	ENSMUST00000135421.8	1407	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.35702260395516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGTGAGTTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	23060244	23003997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_23004839_23008352_23008459_23042788_23042850_23059845
ENSMUST00000135432.8	chr8	+	3010	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGATACTATTTTAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	47005089	47033042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUST00000135432.8-0	chr8	+	1628	14	FSM	ENSMUSG00000031629.15	ENSMUST00000135432.8	3010	14	14	1368	0	261	multi-exon	FALSE	canonical	3	36	junction_3	96.1013395100261	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAATGATCCTGGTTA	NA	False	NA	11	True	AATAAA	-27	NA	47005103	47031674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_47005163_47007049_47007099_47008489_47008596_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUST00000135446.8	chr8	-	520	4	FSM	ENSMUSG00000090137.9	ENSMUST00000135446.8	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_3	10349.9061616787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCATACCTGGCATGTG	NA	False	NA	-69	True	AATAAA	-4	NA	70963451	70960977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70963333
ENSMUST00000135454.8	chr4	+	695	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	36	2266	0	0	multi-exon	FALSE	canonical	3	475	junction_1	98.5130261769001	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCGTGAAGGTGGTCT	NA	False	NA	14	True	AATAAA	-19	NA	107747045	107754315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ENSMUST00000135467.8	chr7	-	1961	14	FSM	ENSMUSG00000074358.10	ENSMUST00000135467.8	1961	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	61.8715026505473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	2777	False	NA	-2	True	AATAAA	-17	NA	18644323	18624808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859_18628071_18633482_18633608_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ENSMUST00000135469.8	chr2	+	6663	12	FSM	ENSMUSG00000004085.15	ENSMUST00000135469.8	6663	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	6.87671841784634	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTTATGTGTCGCT	3325	False	NA	NA	False	AATAAA	-16	NA	72116071	72237846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72232332
ENSMUST00000135491.2	chrX	+	636	6	FSM	ENSMUSG00000086685.2	ENSMUST00000135491.2	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	12.0266371026983	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATTGTTTATTGCTG	NA	False	NA	NA	False	NA	NA	NA	134420339	134450065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134420483_134421903_134421994_134423420_134423510_134425261_134425360_134428618_134428718_134449948
ENSMUST00000135515.2	chr11	-	1256	4	FSM	ENSMUSG00000061111.9	ENSMUST00000135515.2	1256	4	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_3	32.7244387100664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCCATGGCAGTCTGT	NA	False	NA	-24	True	AATAAA	-17	NA	120440527	120433713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120434575_120434729_120434832_120435506_120435755_120440482
ENSMUST00000135523.5	chr14	-	4773	2	FSM	ENSMUSG00000049532.12	ENSMUST00000135523.5	4773	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTCCTTATTTTATG	NA	False	NA	NA	False	ATTAAA	-24	NA	52553780	52548628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52553121_52553499
ENSMUST00000135570.8	chr7	-	960	10	FSM	ENSMUSG00000030751.19	ENSMUST00000135570.8	960	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	875.758056108824	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCCAGATGTAAGTTTT	NA	False	NA	NA	False	TTTAAA	-39	NA	113875261	113864029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875195
ENSMUST00000135573.8	chr4	+	2294	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	0	0	0	0	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGTTCATTGGGTATC	NA	False	NA	NA	False	AATAAA	-15	NA	116542740	116558019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUST00000135573.8-0	chr4	+	932	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	55	1307	0	243	multi-exon	FALSE	canonical	3	22651	junction_3	699.316637868713	7839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUST00000135582.8	chr4	-	1771	10	FSM	ENSMUSG00000009640.12	ENSMUST00000135582.8	1771	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	54.4190416928251	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTTTCCTCACTTCC	NA	False	NA	-35	True	AATAGA	-20	NA	117539450	117531877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539191_117539410
ENSMUST00000135625.8	chr2	-	641	4	FSM	ENSMUSG00000027288.17	ENSMUST00000135625.8	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	353.197143564642	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGGTTGGAAACATTCC	9785	False	NA	NA	False	NA	NA	NA	120394324	120362366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120362704_120376323_120376386_120385711_120385797_120394167
ENSMUST00000135655.2	chr10	+	1057	2	FSM	ENSMUSG00000006732.15	ENSMUST00000135655.2	1057	2	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	126877825	126879871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126877940_126878928
ENSMUST00000135671.8	chr6	+	397	4	FSM	ENSMUSG00000002416.14	ENSMUST00000135671.8	4371	4	14	3960	0	0	multi-exon	FALSE	canonical	3	748	junction_3	834.773555456142	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCATTAAAGGTGTAAAT	NA	False	NA	-19	True	AAGAAA	-7	NA	39569521	39576356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_39569647_39573384_39573530_39575199_39575296_39576325
ENSMUST00000135680.8	chr1	+	2999	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	0	0	0	0	multi-exon	FALSE	canonical	3	2655	junction_1	51	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTAGGGTTGATCTGGCT	NA	False	NA	NA	False	AATAAA	-24	NA	160022784	160029740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160022882_160024515_160024675_160026997
ENSMUST00000135685.2	chr2	+	735	3	FSM	ENSMUSG00000027353.15	ENSMUST00000135685.2	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	25.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGGAGAACCAACCAAGAAA	NA	False	NA	NA	False	NA	NA	NA	132658143	132659945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_132658386_132658993_132659166_132659624
ENSMUST00000135719.8	chr3	-	1981	12	FSM	ENSMUSG00000027829.16	ENSMUST00000135719.8	1981	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_8	51.1618724254952	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATTTTTACAAGGAAATA	NA	False	NA	NA	False	TTTAAA	-44	NA	65865453	65853615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
ENSMUST00000135724.2	chr3	-	437	2	FSM	ENSMUSG00000062908.13	ENSMUST00000135724.2	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATTAACTGTAACATAC	161	False	NA	NA	False	AATAAA	-28	NA	153650100	153647238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153647608_153650032
ENSMUST00000135743.2	chr6	+	1861	2	FSM	ENSMUSG00000038871.6	ENSMUST00000135743.2	1861	2	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATTGACAGACTATAAT	NA	False	NA	NA	False	ATTAAA	-14	NA	34453290	34466018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_34453358_34464224
ENSMUST00000135752.2	chr2	-	737	4	FSM	ENSMUSG00000052406.15	ENSMUST00000135752.2	737	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	97.40978732482	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGGACACTCAGAAATTC	NA	False	NA	NA	False	AAAAAG	-5	NA	26854290	26846344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26846376_26850614_26850753_26852394_26852736_26854063
ENSMUST00000135780.2	chr4	-	506	3	FSM	ENSMUSG00000014592.22	ENSMUST00000135780.2	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	493.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTCATCTTTTTAAAA	NA	False	NA	-23	True	AATAAA	-10	NA	151946195	151876686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_151876960_151914874_151914994_151946081
ENSMUST00000135795.8	chr19	-	1686	12	FSM	ENSMUSG00000025008.16	ENSMUST00000135795.8	1686	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	4.71501908359634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAGTTCTCAACCCATG	NA	False	NA	NA	False	AATAAA	-15	NA	40600647	40593541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_40593904_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094_40600219_40600368
ENSMUST00000135808.8	chr19	-	1309	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	6.9961950774782	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATCAAAAGGTATACCTTA	NA	False	NA	NA	False	AATAAA	-30	NA	60849917	60827185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
ENSMUST00000135847.2	chr2	-	1813	6	FSM	ENSMUSG00000033396.14	ENSMUST00000135847.2	1813	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	7.08237248385031	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTGTGTCTTAATTT	6990	False	NA	NA	False	NA	NA	NA	121948856	121938146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ENSMUST00000135853.2	chr11	-	349	3	FSM	ENSMUSG00000020268.15	ENSMUST00000135853.2	349	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCCCCCAAAGATAACAA	NA	False	NA	NA	False	NA	NA	NA	54751411	54740999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54741242_54744052_54744126_54751377
ENSMUST00000135874.2	chr4	+	741	2	FSM	ENSMUSG00000038007.15	ENSMUST00000135874.2	2943	2	0	2202	0	129	multi-exon	FALSE	canonical	3	467	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTGGTGTGGTTCAAGA	4120	False	NA	22	True	NA	NA	NA	86848927	86850857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_86849080_86850268
ENSMUST00000135877.8	chr1	+	691	6	FSM	ENSMUSG00000025967.17	ENSMUST00000135877.8	691	6	0	0	0	0	multi-exon	FALSE	canonical	1	59	junction_1	1289.84206785172	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACGTACAGTCCATGGAT	NA	False	NA	-58	True	NA	NA	NA	63216303	63218727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_63216410_63216881_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUST00000135884.8	chr11	-	3181	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	0	0	0	0	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTATGTGTAGGTGTG	385	False	NA	NA	False	NA	NA	NA	93859347	93847804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUST00000135884.8-0	chr11	-	679	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	249	2253	0	240	multi-exon	FALSE	canonical	3	3315	junction_4	669.623401622136	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATTGCTGTACAGCT	634	False	NA	-16	True	ATTAAA	-15	NA	93859098	93850057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUST00000135886.2	chr7	-	2732	2	FSM	ENSMUSG00000045251.14	ENSMUST00000135886.2	2732	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	6884	False	NA	-6	True	ATTAAA	-15	NA	127021240	127018140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127018814_127019181
ENSMUST00000135905.8	chr7	-	3080	6	FSM	ENSMUSG00000025722.17	ENSMUST00000135905.8	3080	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	8.49941174435031	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCAATTAGCAATTTA	NA	False	NA	-7	True	AATAAA	-20	NA	80550982	80541008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
ENSMUST00000135906.8	chr5	-	2117	13	FSM	ENSMUSG00000029012.12	ENSMUST00000135906.8	2117	13	0	0	0	0	multi-exon	TRUE	canonical	3	527	junction_9	41.555434863164	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTTCTTTGGTTCTG	NA	False	NA	-3	True	AATAAA	-18	NA	22755302	22691482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ENSMUST00000135907.8	chr10	+	2692	3	FSM	ENSMUSG00000019796.13	ENSMUST00000135907.8	976	3	-255	-1461	55	0	multi-exon	FALSE	canonical	3	11	junction_1	106	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTCTTATAAATTATAG	7320	False	NA	23	True	AATAAA	-30	NA	7465635	7501247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7466378_7484307_7484404_7499393
ENSMUST00000135914.8	chrX	+	1128	4	FSM	ENSMUSG00000019087.14	ENSMUST00000135914.8	1128	4	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	13.1233464566864	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACGGTGAGTGTGTTACT	NA	False	NA	NA	False	NA	NA	NA	73340782	73344964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183
ENSMUST00000135923.2	chr7	-	391	4	FSM	ENSMUSG00000030602.14	ENSMUST00000135923.2	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	239.96712737836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACCATGTTTGGAAAGA	4626	False	NA	NA	False	NA	NA	NA	28297580	28267669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28267724_28269217_28269292_28269596_28269739_28297459
ENSMUST00000135924.2	chr4	+	3190	6	FSM	ENSMUSG00000028277.14	ENSMUST00000135924.2	3190	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	31.212817879839	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTACTGGTGTTACTA	4971	False	NA	28	True	AATAAA	-38	NA	33036727	33052363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33049681
ENSMUST00000135930.8	chr5	-	8069	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	10.9452813428194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGGCTGAAGTTTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	68004713	67775482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ENSMUST00000135930.8-0	chr5	-	7112	36	FSM	ENSMUSG00000037685.16	ENSMUST00000135930.8	8069	36	-64	1021	0	0	multi-exon	FALSE	canonical	3	27	junction_2	10.9452813428194	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATACTTTGCTGTGTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	68004777	67776503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_67780040_67781352_67781445_67788033_67788127_67788829_67788919_67805035_67805144_67805867_67805925_67808930_67808993_67813248_67813328_67817212_67817336_67817436_67817512_67824663_67824775_67824866_67825051_67840100_67840274_67860322_67860388_67863248_67863388_67887134_67887275_67889511_67889597_67895755_67895826_67902922_67902973_67904620_67904704_67906393_67906500_67908355_67908429_67918456_67918546_67919858_67919937_67922206_67922335_67924362_67924529_67926394_67926507_67932065_67932194_67933471_67933542_67938330_67938405_67943968_67944010_67962999_67963046_67969430_67969530_67970434_67970535_67971951_67972067_68004504
ENSMUST00000135941.8	chr1	+	1735	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	0	0	0	0	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCTCTATTTTTTGT	NA	False	NA	5	True	NA	NA	NA	171173237	171186822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
ENSMUST00000135941.8-0	chr1	+	642	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	0	1093	0	191	multi-exon	FALSE	canonical	3	1860	junction_3	112.860779527503	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACTTAGCTATAGCCTG	NA	False	NA	20	True	NA	NA	NA	171173237	171185729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
ENSMUST00000135973.8	chr1	+	4696	22	FSM	ENSMUSG00000062590.14	ENSMUST00000135973.8	4696	22	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_21	14.7732675162462	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAAGGCTAAAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	86082505	86187549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86082566_86084639_86084728_86087716_86087846_86090386_86090558_86092417_86092574_86097631_86097725_86099845_86099871_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179998_86180115_86184947
ENSMUST00000136008.8	chr6	-	4174	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	148113872	148080576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUST00000136008.8-1	chr6	-	2858	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	352	964	0	-964	multi-exon	FALSE	canonical	3	798	junction_5	68.0164442351299	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113520	148081540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUST00000136026.8	chr8	+	1686	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTGTGCTGTTCTCTTC	NA	False	NA	NA	False	CATAAA	-14	NA	85598739	85614850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
ENSMUST00000136026.8-0	chr8	+	779	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	82	825	0	-50	multi-exon	FALSE	canonical	3	1047	junction_2	374.154045815357	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTCATACTTTATTCC	NA	False	NA	31	True	ATTAAA	-14	NA	85598821	85614025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
ENSMUST00000136075.8	chr12	-	1970	6	FSM	ENSMUSG00000021098.15	ENSMUST00000136075.8	1970	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.1049660707994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGTATTTTGCCT	NA	False	NA	NA	False	AATAAA	-21	NA	72987548	72958432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_72960049_72963447_72963505_72963596_72963654_72986096_72986191_72986483_72986554_72987472
ENSMUST00000136107.9	chr8	+	3818	8	FSM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	11.0435131943358	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTACATATTTACAAAAT	9685	False	NA	NA	False	AATAAA	-26	NA	26092299	26164932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
ENSMUST00000136113.2	chr4	-	1011	2	FSM	ENSMUSG00000028826.15	ENSMUST00000136113.2	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAATAAAACAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	134580628	134564570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_134565302_134580348
ENSMUST00000136145.8	chr2	+	1118	7	FSM	ENSMUSG00000059540.16	ENSMUST00000136145.8	1118	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	2.21108319357027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACACTGTCCTTCCTGC	5557	False	NA	NA	False	NA	NA	NA	181325367	181329704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181325447_181326235_181326327_181327584_181327716_181327982_181328546_181328620_181328768_181329406_181329479_181329669
ENSMUST00000136155.2	chrX	-	1212	4	FSM	ENSMUSG00000031146.7	ENSMUST00000136155.2	1212	4	0	0	0	0	multi-exon	FALSE	canonical	3	2052	junction_3	118.4229707447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGTTTAAGTCTATAAT	NA	False	NA	NA	False	AATAAA	-9	NA	7537611	7534198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7534746_7535165_7535257_7535653_7535998_7537381
ENSMUST00000136165.8	chr3	+	721	4	FSM	ENSMUSG00000028049.16	ENSMUST00000136165.8	721	4	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	347.04978829493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCACAGATGCCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	89084802	89086972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623
ENSMUST00000136174.8	chr4	-	1128	4	FSM	ENSMUSG00000028495.15	ENSMUST00000136174.8	1128	4	0	0	0	0	multi-exon	FALSE	canonical	3	14010	junction_1	4247.77282820068	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAGGAAGCCAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	86775582	86773040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964
ENSMUST00000136175.3	chr12	-	4337	7	FSM	ENSMUSG00000084883.3	ENSMUST00000136175.3	1302	7	-292	-2743	0	0	multi-exon	TRUE	canonical	2	6	junction_4	32.190405748021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGTGTGTAGTGCT	NA	False	NA	-7	True	AATAAA	-19	NA	108241684	108169860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108183045_108183085_108187967_108188042_108240596
ENSMUST00000136207.2	chr2	-	1201	7	FSM	ENSMUSG00000026779.7	ENSMUST00000136207.2	1201	7	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_4	13.2759180473518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAGTTGTGATACTGG	NA	False	NA	NA	False	TATAAA	-16	NA	23045909	23026695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUST00000136214.8	chr11	+	2556	8	FSM	ENSMUSG00000020691.14	ENSMUST00000136214.8	2556	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	88.9260183225015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105017304	105031220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105018268_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ENSMUST00000136251.8	chrX	+	1337	5	FSM	ENSMUSG00000031311.18	ENSMUST00000136251.8	1337	5	0	0	0	0	multi-exon	FALSE	canonical	3	3435	junction_2	145.837238042963	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAAGTCAAAGTCTGTGG	NA	False	NA	NA	False	NA	NA	NA	100486911	100491508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
ENSMUST00000136252.8	chr16	-	1362	10	FSM	ENSMUSG00000033918.17	ENSMUST00000136252.8	1362	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	534.615126360388	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121095	20098569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112047_20112153_20116342_20116484_20116880_20117077_20120958
ENSMUST00000136263.4	chr6	+	1601	7	FSM	ENSMUSG00000030271.15	ENSMUST00000136263.4	1601	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	81.0445693567572	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGCAGTGAAGAGTGAG	2335	False	NA	10	True	AATAAA	-19	NA	113303959	113311145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113304324_113305325_113305574_113306106_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ENSMUST00000136274.3	chr9	+	2909	11	FSM	ENSMUSG00000046603.17	ENSMUST00000136274.3	2909	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	5.03984126734166	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACAGCTGCGTTCCAGG	NA	False	NA	15	True	AATAAA	-15	NA	122634660	122665392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647914_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUST00000136312.2	chr5	-	2618	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	0	0	0	0	multi-exon	FALSE	canonical	3	916	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTGGTTGGTTC	NA	False	NA	0	True	AATAAA	-26	NA	125467078	125463028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125465329_125466760
ENSMUST00000136330.2	chr2	+	417	3	FSM	ENSMUSG00000002728.15	ENSMUST00000136330.2	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_2	9.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAAGAGGCAGTGGT	NA	False	NA	NA	False	NA	NA	NA	145745216	145753918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_145745283_145750510_145750536_145753592
ENSMUST00000136331.8	chr1	-	1655	11	FSM	ENSMUSG00000026466.17	ENSMUST00000136331.8	2723	11	521	547	91	0	multi-exon	FALSE	canonical	2	47	junction_4	24.0865107477194	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCCTAATTATCTGTGAT	NA	False	NA	NA	False	AGTAAA	-36	NA	155911705	155882526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155895713_155895770_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ENSMUST00000136342.9	chr4	-	3152	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_5	197.323579826916	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTTGACTATTGTTGG	NA	False	NA	-16	True	TTTAAA	-4	NA	135080555	135048404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUST00000136364.8	chr2	+	677	3	FSM	ENSMUSG00000086454.8	ENSMUST00000136364.8	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	266	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGTGAACCTGTTCAGAC	NA	False	NA	NA	False	NA	NA	NA	104389523	104398398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_104389756_104390068_104390321_104398205
ENSMUST00000136390.8	chr15	-	3071	22	FSM	ENSMUSG00000022568.18	ENSMUST00000136390.8	3071	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	122.601025027805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75934568	75919006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75934518
ENSMUST00000136432.2	chr10	+	2968	3	FSM	ENSMUSG00000053684.9	ENSMUST00000136432.2	2968	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	61	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTTTCTGGTCAAGCA	NA	False	NA	NA	False	AATAAA	-38	NA	121575842	121588783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_121576116_121581402_121581522_121586207
ENSMUST00000136438.8	chr11	-	1436	3	FSM	ENSMUSG00000087259.8	ENSMUST00000136438.8	1436	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGTCTTTTCTAAA	NA	False	NA	NA	False	TATAAA	-23	NA	113063903	112934720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_112935987_112958167_112958213_113063778
ENSMUST00000136459.2	chr5	+	2340	4	FSM	ENSMUSG00000028973.19	ENSMUST00000136459.2	2340	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGGCTGTAGCTTAGT	NA	False	NA	30	True	AATAAA	-20	NA	24610812	24614944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24611253_24611397_24612454_24613565_24613817_24614351
ENSMUST00000136477.2	chr11	+	1025	2	FSM	ENSMUSG00000042298.19	ENSMUST00000136477.2	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	62172298	62173414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62172520_62172610
ENSMUST00000136481.8	chr2	+	3048	21	FSM	ENSMUSG00000002455.15	ENSMUST00000136481.8	3048	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_20	98.1260796118952	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTTATGTTGGGGCT	2491	False	NA	19	True	ATTAAA	-7	NA	181243108	181297444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296755_181297213
ENSMUST00000136490.8	chr5	-	784	4	FSM	ENSMUSG00000029192.18	ENSMUST00000136490.8	784	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTTCCCTGCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	36750595	36729132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36729382_36742125_36742181_36749302_36749689_36750501
ENSMUST00000136501.2	chr6	+	2312	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGACTTCCATTCATGAC	349	False	NA	NA	False	AATATA	-32	NA	83326427	83337118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
ENSMUST00000136501.2-0	chr6	+	527	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	45	1740	0	0	multi-exon	FALSE	canonical	3	755	junction_1	124.478467571259	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGTGCCATGCTTCAGG	394	False	NA	26	True	ATTAAA	-26	NA	83326472	83335378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
ENSMUST00000136508.3	chr7	-	2856	3	FSM	ENSMUSG00000037029.9	ENSMUST00000136508.3	585	3	-36	-2235	0	780	multi-exon	FALSE	canonical	1	5	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTAAATCCTTCTTTA	NA	False	NA	-1	True	ATTAAA	-17	NA	29869152	29859913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29862654_29862751_29862799_29869083
ENSMUST00000136512.3	chr3	-	3142	3	FSM	ENSMUSG00000034317.15	ENSMUST00000136512.3	1553	3	-40	-1549	0	0	multi-exon	FALSE	canonical	3	60	junction_2	267.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952088	68942620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_68945342_68951100_68951176_68951742
ENSMUST00000136513.2	chr2	-	4311	10	FSM	ENSMUSG00000027438.15	ENSMUST00000136513.2	4311	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	1.6629588385662	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGACTGTTTTTTTGG	NA	False	NA	0	True	AATAAA	-18	NA	148574333	148535904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
ENSMUST00000136516.9	chr8	+	2646	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	10	-2055	0	0	multi-exon	FALSE	canonical	3	96	junction_2	182.5	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704920	72724177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72705005_72719637_72719765_72721742
ENSMUST00000136525.2	chr4	-	701	2	FSM	ENSMUSG00000086096.2	ENSMUST00000136525.2	701	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCATTAATTACGGTGCG	NA	False	NA	-10	True	AATAAA	-19	NA	99543220	99541843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_99542477_99543152
ENSMUST00000136532.2	chr16	+	760	2	FSM	ENSMUSG00000054604.8	ENSMUST00000136532.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATACCTAAGTCAGACCA	NA	False	NA	NA	False	NA	NA	NA	64673064	64676349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_64673389_64675913
ENSMUST00000136552.8	chr11	+	1566	11	FSM	ENSMUSG00000034285.16	ENSMUST00000136552.8	1566	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	513.053808094239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAATAAAAAT	NA	False	NA	NA	False	AAAAAG	-16	NA	4823998	4843617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4824104_4832900_4833172_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUST00000136573.8	chr3	+	2759	3	FSM	ENSMUSG00000047824.14	ENSMUST00000136573.8	584	3	210	-2385	0	0	multi-exon	FALSE	canonical	3	4	junction_1	130	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337730	89342435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89337761_89338433_89338484_89339756
ENSMUST00000136576.8	chr13	+	3829	5	FSM	ENSMUSG00000054728.18	ENSMUST00000136576.8	716	5	0	-3113	0	0	multi-exon	FALSE	canonical	3	6	junction_4	2.29128784747792	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTGACTCCTGTGTTG	NA	False	NA	22	True	NA	NA	NA	43276332	43292000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_43276531_43281613_43281676_43286395_43286537_43287402_43287480_43288649
ENSMUST00000136579.3	chr19	-	734	6	FSM	ENSMUSG00000024914.17	ENSMUST00000136579.3	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_1	82.8700187039921	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTCTTAAATTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	5474542	5472870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388
ENSMUST00000136582.2	chr2	-	4959	2	FSM	ENSMUSG00000078919.11	ENSMUST00000136582.2	4959	2	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTGCTTTCATTTAG	NA	False	NA	-20	True	AATAAA	-22	NA	168057889	168052201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168052557_168053285
ENSMUST00000136587.8	chr11	+	832	3	FSM	ENSMUSG00000020385.17	ENSMUST00000136587.8	832	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	33	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGTTGGAAATAACTCAG	NA	False	NA	NA	False	AAGAAA	-11	NA	51153990	51163191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51154097_51157997_51158159_51162626
ENSMUST00000136591.8	chr15	-	2060	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	0	0	0	0	multi-exon	TRUE	canonical	3	660	junction_1	60.8163473021321	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTGCTTCAGTGATTTA	-35	True	NA	-15	True	ATTAAA	-23	NA	10470602	10446841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ENSMUST00000136618.8	chr16	+	1014	9	FSM	ENSMUSG00000022681.16	ENSMUST00000136618.8	1014	9	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	197.353743313878	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTAGATGACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	13637169	13653312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13637301_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUST00000136628.2	chr2	+	471	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCAGTGTCTTCTTGAAG	NA	False	NA	NA	False	NA	NA	NA	144435973	144437286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144436126_144436967
ENSMUST00000136630.8	chr2	-	1606	9	FSM	ENSMUSG00000039660.17	ENSMUST00000136630.8	1606	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	125.421290058746	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTAGACCCTGATGCT	NA	False	NA	-25	True	AATAAA	-18	NA	30067517	30063479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066739_30066841_30067334
ENSMUST00000136634.8	chr5	+	1660	3	FSM	ENSMUSG00000039754.11	ENSMUST00000136634.8	557	3	0	-1103	0	0	multi-exon	FALSE	canonical	3	9	junction_1	26.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTTCTCCTTTTCCCAT	NA	False	NA	NA	False	AATAAA	-26	NA	136164999	136170469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136165149_136168315_136168390_136169032
ENSMUST00000136652.8	chr7	-	756	5	FSM	ENSMUSG00000030615.13	ENSMUST00000136652.8	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	308.308591349641	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	1666	False	NA	NA	False	AATAAA	-19	NA	90106416	90099907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_90100144_90100750_90100866_90101936_90102109_90104631_90104728_90106279
ENSMUST00000136665.2	chr11	+	688	2	FSM	ENSMUSG00000018449.13	ENSMUST00000136665.2	688	2	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGGAATTCTAAGTTTAG	NA	False	NA	NA	False	NA	NA	NA	70861311	70863175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70861414_70862589
ENSMUST00000136669.2	chr4	-	1514	6	FSM	ENSMUSG00000028577.14	ENSMUST00000136669.2	1514	6	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_4	59.2398514515356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAACAGGAAAAGGACA	NA	False	NA	NA	False	GATAAA	-17	NA	94491372	94473996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ENSMUST00000136706.8	chr2	-	4561	7	FSM	ENSMUSG00000038990.15	ENSMUST00000136706.8	4561	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_5	11.9826263120125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATACTTCCTTGCTTGTCTC	NA	False	NA	-4	True	AGTAAA	-15	NA	179915256	179900335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904949_179906006_179906100_179906195_179906268_179914892
ENSMUST00000136710.2	chr2	-	1121	7	FSM	ENSMUSG00000052406.15	ENSMUST00000136710.2	1121	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	74.3611681816076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGTACTGCAAACCGGC	NA	False	NA	NA	False	NA	NA	NA	26854291	26844552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26844609_26845506_26845582_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUST00000136748.6	chr5	+	4363	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGCATGGCC	NA	False	NA	NA	False	NA	NA	NA	135661507	135675302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
ENSMUST00000136748.6-0	chr5	+	1992	5	FSM	ENSMUSG00000039917.11	ENSMUST00000136748.6	4363	5	69	2302	0	-381	multi-exon	FALSE	canonical	3	43	junction_1	101.030626544628	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGTGGCATACTG	NA	False	NA	15	True	TATAAA	-19	NA	135661576	135673000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135661773_135663957_135664078_135664848_135665257_135667943_135668095_135671883
ENSMUST00000136755.10	chr13	+	8274	10	FSM	ENSMUSG00000021763.18	ENSMUST00000136755.10	8274	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	5.32870169256969	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCTCTGTCATTTGTT	NA	False	NA	NA	False	NA	NA	NA	113429692	113507049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_113429869_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
ENSMUST00000136756.2	chr19	+	1005	5	FSM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	-26	922	0	-922	multi-exon	FALSE	canonical	3	44	junction_1	71.8135606971274	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGAGGATACTGCAG	NA	False	NA	13	True	AATAAA	-15	NA	7534823	7563154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7535168_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ENSMUST00000136757.8	chr7	-	789	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	30.4740326617051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCATTAGCGATCTCAC	NA	False	NA	NA	False	AATAAA	-31	NA	97228704	97199537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
ENSMUST00000136758.2	chr8	+	3517	6	FSM	ENSMUSG00000036054.16	ENSMUST00000136758.2	3517	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	8.51821577561874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTATTATGTACACAGCG	1489	False	NA	NA	False	AATAAA	-18	NA	70687272	70707413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228
ENSMUST00000136776.8	chr16	-	2041	14	FSM	ENSMUSG00000003526.13	ENSMUST00000136776.8	2041	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	36.2063448622479	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	7032	False	NA	-1	True	AATAAA	-19	NA	17908067	17889589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17908006
ENSMUST00000136799.2	chr11	-	828	2	FSM	ENSMUSG00000020876.15	ENSMUST00000136799.2	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAAGGAGAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	96668346	96667125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96667888_96668280
ENSMUST00000136800.2	chr18	+	1503	4	FSM	ENSMUSG00000090000.3	ENSMUST00000136800.2	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	763.929461548789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTAAGCGTCTGATTT	NA	False	NA	8	True	AATAAA	-10	NA	77017740	77029301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77017913_77018319_77018456_77027263_77027366_77028208
ENSMUST00000136800.2-0	chr18	+	587	4	FSM	ENSMUSG00000090000.3	ENSMUST00000136800.2	1503	4	0	916	0	0	multi-exon	FALSE	canonical	3	14	junction_2	763.929461548789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAAAGTTGACAATAAA	NA	False	NA	-16	True	NA	NA	NA	77017740	77028385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77017913_77018319_77018456_77027263_77027366_77028208
ENSMUST00000136803.2	chr2	+	1009	2	FSM	ENSMUSG00000039069.20	ENSMUST00000136803.2	1009	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	179720412	179724683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179720617_179723878
ENSMUST00000136804.2	chr6	+	855	3	FSM	ENSMUSG00000030335.7	ENSMUST00000136804.2	855	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	333	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCTGCCTCGTTCCTAAG	NA	False	NA	49	True	NA	NA	NA	125168763	125170521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125169172_125169478_125169590_125170185
ENSMUST00000136810.8	chr11	-	964	5	FSM	ENSMUSG00000020182.17	ENSMUST00000136810.8	964	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.0271658914602	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTGAGTAAGCGTC	NA	False	NA	-3	True	AATAAA	-19	NA	11772921	11764102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11772791
ENSMUST00000136828.3	chr1	-	2771	4	FSM	ENSMUSG00000042066.17	ENSMUST00000136828.3	2771	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.490737563232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGAGGTCTGCTG	NA	False	NA	-1	True	AATAAA	-22	NA	132294810	132284053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132294618
ENSMUST00000136839.2	chr2	+	452	4	FSM	ENSMUSG00000052033.14	ENSMUST00000136839.2	452	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	373.855884295302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTTCCCTTCTCCAAA	4052	False	NA	10	True	AATAAA	-20	NA	170353364	170360782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_170353390_170357658_170357767_170358481_170358611_170360592
ENSMUST00000136871.2	chr9	+	1919	5	FSM	ENSMUSG00000034593.17	ENSMUST00000136871.2	1919	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	5.33853912601566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAATGAGAAAAATAGA	2351	False	NA	NA	False	NA	NA	NA	74978487	75038290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253
ENSMUST00000136872.8	chr2	+	2596	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	0	0	0	0	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGGTGTGACTTAGTGGT	96	False	NA	NA	False	ATTAAA	-12	NA	90677498	90697154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000136872.8-0	chr2	+	1101	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	76	1419	0	0	multi-exon	FALSE	canonical	3	2037	junction_4	251.273534000079	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGGTGTCTGCCTT	172	False	NA	51	True	NA	NA	NA	90677574	90695735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUST00000136874.4	chr4	+	2121	14	FSM	ENSMUSG00000073791.14	ENSMUST00000136874.4	2121	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.10481846862679	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGTCTTGTTAATTG	2075	False	NA	NA	False	AATACA	-19	NA	99717736	99769985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99717792_99719629_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ENSMUST00000136889.8	chr6	+	1224	3	FSM	ENSMUSG00000059689.16	ENSMUST00000136889.8	659	3	-22	-543	0	0	multi-exon	FALSE	canonical	3	25	junction_1	15.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGTATTTTTCATAATTT	NA	False	NA	11	True	AATAAA	-18	NA	117818206	117822917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117818359_117820213_117820354_117821985
ENSMUST00000136893.3	chr11	+	311	1	FSM	ENSMUSG00000024205.8	ENSMUST00000136893.3	311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTCCCCCAATAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	76492144	76492455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_76492100_76492500
ENSMUST00000136902.2	chr9	-	780	3	FSM	ENSMUSG00000036737.13	ENSMUST00000136902.2	780	3	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCACAGACCTGGAAGA	NA	False	NA	NA	False	NA	NA	NA	119072428	119070210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_119070283_119070776_119070842_119071785
ENSMUST00000136913.2	chr8	-	671	5	FSM	ENSMUSG00000058833.12	ENSMUST00000136913.2	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	340.250918441082	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTTCCCATCAGCTC	NA	False	NA	-12	True	AATAAA	-13	NA	70959387	70956948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70957179_70957633_70957711_70958405_70958611_70959146_70959230_70959311
ENSMUST00000136915.2	chrX	+	761	5	FSM	ENSMUSG00000001924.16	ENSMUST00000136915.2	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	3123	junction_1	299.537560249128	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGTGAGTAGGCTATTGC	NA	False	NA	NA	False	NA	NA	NA	20546833	20548444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347
ENSMUST00000136933.8	chr2	-	2413	10	FSM	ENSMUSG00000005882.19	ENSMUST00000136933.8	2413	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	134.914879429061	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	NA	False	NA	-31	True	AATAAA	-20	NA	155771980	155688813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752388_155753660_155753757_155763554_155763648_155771932
ENSMUST00000136935.2	chr11	+	351	2	FSM	ENSMUSG00000017774.20	ENSMUST00000136935.2	351	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCCATGAGCACGGCT	NA	False	NA	NA	False	NA	NA	NA	75547023	75548474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75547218_75548317
ENSMUST00000136936.2	chr11	-	953	3	FSM	ENSMUSG00000015837.16	ENSMUST00000136936.2	953	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCACTTTAACCAGCCCT	NA	False	NA	-29	True	AATAAA	-7	NA	50093781	50090993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50091775_50093225_50093257_50093640
ENSMUST00000136937.8	chr3	+	3878	5	FSM	ENSMUSG00000005687.15	ENSMUST00000136937.8	3878	5	0	0	0	0	multi-exon	FALSE	canonical	3	3803	junction_1	91.1564589044572	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTTATGTGTGGCTAT	4977	False	NA	46	True	AATAAA	-14	NA	103079018	103086141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103084736_103085670
ENSMUST00000136938.2	chr11	+	890	2	FSM	ENSMUSG00000019505.8	ENSMUST00000136938.2	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGGCAAGACCATCACCTT	NA	False	NA	NA	False	NA	NA	NA	62442501	62443679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62442678_62442965
ENSMUST00000136938.2-0	chr11	+	1197	2	FSM	ENSMUSG00000019505.8	ENSMUST00000136938.2	890	2	53	-360	53	0	multi-exon	FALSE	canonical	3	711	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTGTCACTTGTGAAAT	NA	False	NA	25	True	AATAAA	-24	NA	62442554	62444039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62442678_62442965
ENSMUST00000136960.8	chr5	-	4313	7	FSM	ENSMUSG00000042594.17	ENSMUST00000136960.8	4313	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	11.6535640709422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAACCATGATCTCTGC	NA	False	NA	-20	True	ATTAAA	-13	NA	121974888	121953550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121956157_121956278_121956451_121956527_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ENSMUST00000136965.8	chr9	-	5045	24	FSM	ENSMUSG00000032462.15	ENSMUST00000136965.8	5045	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	66.5032654086918	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTGTCTTCTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	99021978	98920453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947616_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99021563
ENSMUST00000136970.8	chr3	+	2214	10	FSM	ENSMUSG00000027936.19	ENSMUST00000136970.8	2214	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	29.0814097846327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGTGCTTGGCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	90161647	90171427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90161866_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ENSMUST00000136976.7	chr1	-	1845	12	FSM	ENSMUSG00000013593.13	ENSMUST00000136976.7	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_11	112.190068946623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	False	NA	-1	True	ATTAAA	-28	NA	171074691	171062421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUST00000136983.8	chr19	-	3314	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATGAGTGCTCTGTCT	1272	False	NA	NA	False	NA	NA	NA	5962899	5946543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUST00000136983.8-0	chr19	-	2379	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	64	871	0	0	multi-exon	FALSE	canonical	3	642	junction_2	68.1739686390634	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	1336	False	NA	-26	True	AATAAA	-14	NA	5962835	5947414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUST00000136985.8	chr11	+	1009	3	FSM	ENSMUSG00000057219.12	ENSMUST00000136985.8	1009	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAGATGCAAAGACCACA	NA	False	NA	NA	False	AAAACA	-30	NA	115366523	115374603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115366854_115366947_115367092_115374068
ENSMUST00000136992.8	chr4	+	876	6	FSM	ENSMUSG00000086587.8	ENSMUST00000136992.8	876	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	12.687001221723	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGGTACAGAATTTTT	0	True	NA	6	True	TATAAA	-17	NA	14930660	14953030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_14930771_14936440_14936540_14938483_14938558_14942199_14942276_14947438_14947546_14952620
ENSMUST00000136996.2	chr11	-	810	3	FSM	ENSMUSG00000046909.10	ENSMUST00000136996.2	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	133.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80030735	80027503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_80028106_80028743_80028908_80030691
ENSMUST00000137088.8	chr3	+	4333	10	FSM	ENSMUSG00000005774.13	ENSMUST00000137088.8	4333	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	4.21637021355784	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGAGTCGTTT	NA	False	NA	NA	False	NA	NA	NA	94861418	94868872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ENSMUST00000137116.3	chr15	+	2921	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	13	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTTTAATAATAGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51740824	51748010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_51741107_51744411_51744587_51745546
ENSMUST00000137116.3-0	chr15	+	941	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	49	1931	0	0	multi-exon	FALSE	canonical	3	321	junction_1	13	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCATCTTCAGTTGTT	NA	False	NA	21	True	AGTAAA	-18	NA	51740873	51746079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_51741107_51744411_51744587_51745546
ENSMUST00000137120.8	chr11	+	1167	5	FSM	ENSMUSG00000001105.16	ENSMUST00000137120.8	1167	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	109.732344821388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAC	NA	False	NA	36	True	AATGAA	-43	NA	78427270	78432311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720
ENSMUST00000137147.9	chr17	+	3822	23	FSM	ENSMUSG00000038677.15	ENSMUST00000137147.9	3822	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	8.92716163604273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAGCCTAGACCTTGC	NA	False	NA	NA	False	NA	NA	NA	28361499	28391111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375735_28375862_28376046_28376164_28377854_28377903_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ENSMUST00000137158.8	chr7	-	3414	12	FSM	ENSMUSG00000044465.20	ENSMUST00000137158.8	3414	12	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_9	116.481616326993	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049192	105027816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038132_105038460_105039100_105039227_105039560_105049090
ENSMUST00000137170.3	chr12	+	2270	6	FSM	ENSMUSG00000085793.4	ENSMUST00000137170.4	2270	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	15.7810012356631	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCCAGGTTTTCCTTG	NA	False	NA	5	True	AATAAA	-16	NA	84498195	84578347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
ENSMUST00000137217.8	chrX	-	4338	6	FSM	ENSMUSG00000045180.14	ENSMUST00000137217.8	4338	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.2747419477029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151427539	151392987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402636_151406121_151406332_151427389
ENSMUST00000137245.8	chr9	+	3022	6	FSM	ENSMUSG00000038957.14	ENSMUST00000137245.8	4277	6	12	1243	0	-1243	multi-exon	FALSE	canonical	3	26	junction_2	95.7613700820952	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCTTCCTAGAGTGAA	NA	False	NA	13	True	AATAAA	-23	NA	57615849	57657443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57615983_57620663_57620845_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ENSMUST00000137307.2	chr7	+	465	3	FSM	ENSMUSG00000025508.14	ENSMUST00000137307.2	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	11307	junction_1	1844.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTCTCTCTCTTTCCT	2416	False	NA	NA	False	NA	NA	NA	141027581	141028940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141027621_141027820_141027945_141028638
ENSMUST00000137318.2	chr6	-	424	2	FSM	ENSMUSG00000072772.4	ENSMUST00000137318.2	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTGTGTCAGTCAT	9602	False	NA	NA	False	AATAAA	-13	NA	124717678	124716149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124716377_124717481
ENSMUST00000137325.2	chr6	+	3200	4	FSM	ENSMUSG00000038346.19	ENSMUST00000137325.2	3200	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	45.6386775541195	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGGTGTTTTTAGACCA	4499	False	NA	-45	True	TATAAA	-33	NA	125007366	125014780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125008817_125010202_125010282_125012675_125012835_125013268
ENSMUST00000137340.2	chr2	-	715	3	FSM	ENSMUSG00000027620.17	ENSMUST00000137340.2	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	908	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCAAAAAAGAGGAAAAAAAA	NA	False	NA	-34	True	AATAGA	-6	NA	156022065	156020480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156020873_156021096_156021161_156021806
ENSMUST00000137378.2	chr10	+	2085	6	FSM	ENSMUSG00000036875.16	ENSMUST00000137378.2	2085	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	108.538656708106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTCACTGAGTCATT	NA	False	NA	53	True	AATAAA	-14	NA	62801754	62809958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ENSMUST00000137381.8	chr2	-	3551	30	FSM	ENSMUSG00000038860.16	ENSMUST00000137381.8	3551	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	24.7888586841601	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGCAACCCTTCTC	NA	False	NA	-10	True	AATAAA	-18	NA	33021448	32876385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33021324
ENSMUST00000137385.2	chr7	-	683	2	FSM	ENSMUSG00000048330.15	ENSMUST00000137385.2	683	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAACAAAAGA	NA	False	NA	NA	False	NA	NA	NA	108682529	108656693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_108657217_108682369
ENSMUST00000137387.8	chr11	-	3408	12	FSM	ENSMUSG00000059995.13	ENSMUST00000137387.8	3408	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	41.9931123829052	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	102185813	102180125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183922_102184101_102184169_102184471_102184495_102184669_102184768_102184959_102185132_102185335_102185469_102185774
ENSMUST00000137423.2	chr4	-	353	2	FSM	ENSMUSG00000047675.16	ENSMUST00000137423.2	353	2	0	0	0	0	multi-exon	FALSE	canonical	3	13045	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTAGGTGTTTGGAG	NA	False	NA	-20	True	AATAAA	-23	NA	117011694	117011030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117011185_117011495
ENSMUST00000137446.8	chr2	+	2274	17	FSM	ENSMUSG00000068040.11	ENSMUST00000137446.8	2274	17	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	54.9846214295415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTCAGCATTGTAATCT	NA	False	NA	NA	False	CATAAA	-15	NA	153003222	153046782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454
ENSMUST00000137463.8	chr2	-	874	4	FSM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	57.393379409127	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGAGGGGGACACTGT	NA	False	NA	NA	False	NA	NA	NA	156681740	156674968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156675347_156679742_156679834_156680337_156680457_156681454
ENSMUST00000137473.8	chr4	+	3607	3	FSM	ENSMUSG00000073792.12	ENSMUST00000137473.8	3607	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	28.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATACCACAAAAACAGTT	NA	False	NA	NA	False	NA	NA	NA	99603900	99618460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99603944_99607267_99607471_99615099
ENSMUST00000137486.3	chr4	-	2296	21	FSM	ENSMUSG00000003644.18	ENSMUST00000137486.3	2296	21	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_20	252.994486105923	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCAGACGAACTCCTCAG	1548	False	NA	NA	False	NA	NA	NA	133600350	133575362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133600154
ENSMUST00000137498.8	chr18	-	1824	15	FSM	ENSMUSG00000025420.14	ENSMUST00000137498.8	1824	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	6.13662474535523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCTGTGTTTCTCCTCA	NA	False	NA	NA	False	TATAAA	-12	NA	77134966	77064846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77103697_77103741_77105156_77105324_77134869
ENSMUST00000137537.2	chr17	-	734	2	FSM	ENSMUSG00000034868.10	ENSMUST00000137537.2	734	2	0	0	0	0	multi-exon	FALSE	canonical	3	2366	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACACACACCCCATAGG	NA	False	NA	NA	False	NA	NA	NA	71282961	71281265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71281492_71282453
ENSMUST00000137563.8	chr11	-	510	4	FSM	ENSMUSG00000034566.11	ENSMUST00000137563.8	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	2984	junction_1	272.998575494859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGTCTCTGAGTAGATAAAT	NA	False	NA	-3	True	AATAAA	-22	NA	115308848	115306514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664
ENSMUST00000137566.8	chr2	-	743	5	FSM	ENSMUSG00000027620.17	ENSMUST00000137566.8	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	903.556307044558	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCTTATCTGGGCTTTT	NA	False	NA	NA	False	NA	NA	NA	156022076	156016608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156016895_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ENSMUST00000137573.2	chr8	-	3245	4	FSM	ENSMUSG00000043090.19	ENSMUST00000137573.2	3245	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.44948974278318	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAAAACAAC	6869	False	NA	NA	False	NA	NA	NA	70227561	70216492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70219428_70220282_70220344_70221770_70221898_70227439
ENSMUST00000137638.8	chr1	+	1594	12	FSM	ENSMUSG00000026289.16	ENSMUST00000137638.8	1594	12	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_8	22.6449417846404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTTGCCTTTGATTGA	7308	False	NA	NA	False	GGGGCT	-44	NA	87683797	87713921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597
ENSMUST00000137641.8	chrX	+	3780	7	FSM	ENSMUSG00000073125.11	ENSMUST00000137641.8	3780	7	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_3	266.969203384127	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72246536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUST00000137648.8	chr17	-	2160	9	FSM	ENSMUSG00000024118.15	ENSMUST00000137648.8	2160	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_8	21.2485293608758	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGCTTGACGGTTAA	3276	False	NA	0	True	AATAAA	-21	NA	24439825	24434212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439285_24439490_24439590_24439664
ENSMUST00000137649.8	chr15	+	2832	4	FSM	ENSMUSG00000033728.15	ENSMUST00000137649.8	2832	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	33.8066397160216	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCATTTCTAGTGTTGC	NA	False	NA	NA	False	NA	NA	NA	76594842	76599284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76595731_76597066_76597421_76597600_76598186_76598279
ENSMUST00000137653.2	chr12	+	399	2	FSM	ENSMUSG00000021177.17	ENSMUST00000137653.2	399	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTTGCACACAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	99852742	99857597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_99852980_99857435
ENSMUST00000137695.2	chr11	+	1387	5	FSM	ENSMUSG00000032615.15	ENSMUST00000137695.2	1387	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	25.8976350271603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGCTGTGGCCTTCTC	1750	False	NA	6	True	AATAAA	-16	NA	59738929	59767359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59739311_59743616_59743718_59751575_59751637_59765378_59765494_59766630
ENSMUST00000137699.3	chr5	+	838	6	FSM	ENSMUSG00000039682.13	ENSMUST00000137699.3	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_5	195.982039993465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCACTGTGGGCAGTGCC	NA	False	NA	NA	False	NA	NA	NA	45650845	45658087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744
ENSMUST00000137702.8	chr7	+	1902	6	FSM	ENSMUSG00000045411.17	ENSMUST00000137702.8	784	6	59	-1177	0	0	multi-exon	FALSE	canonical	3	108	junction_1	258.311904487579	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896233_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000137724.8	chr4	-	5198	23	FSM	ENSMUSG00000029016.14	ENSMUST00000137724.8	5198	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	28.3066151775502	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7414	False	NA	-1	True	AATAAA	-22	NA	148123278	148088715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108682_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ENSMUST00000137739.2	chr11	+	455	2	FSM	ENSMUSG00000018932.10	ENSMUST00000137739.2	455	2	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCATGCCTTCCCAGTCC	NA	False	NA	NA	False	NA	NA	NA	60822879	60832942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60823098_60832705
ENSMUST00000137751.2-1	chr2	+	2543	2	FSM	ENSMUSG00000032802.9	ENSMUST00000137751.2	446	2	68	-2165	60	0	multi-exon	FALSE	canonical	3	20	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAACAGTTTTGGTTGTG	NA	False	NA	31	True	NA	NA	NA	151947503	151953296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151947659_151950908
ENSMUST00000137766.2	chr5	-	620	2	FSM	ENSMUSG00000041697.10	ENSMUST00000137766.2	620	2	0	0	0	0	multi-exon	FALSE	canonical	3	7302	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGGTCCGTGAGCTGG	4921	False	NA	-41	True	AATAAA	-11	NA	115486973	115483715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115483986_115486623
ENSMUST00000137769.3	chr4	-	659	2	FSM	ENSMUSG00000078570.11	ENSMUST00000137769.3	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCAGCCCCACAAAACAC	7912	False	NA	-63	True	NA	NA	NA	124744266	124743338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124743756_124744024
ENSMUST00000137771.2	chr19	-	2014	10	FSM	ENSMUSG00000025223.16	ENSMUST00000137771.2	2014	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	235.530344562811	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGGGCTCCGGGGATAT	8228	False	NA	NA	False	TTTAAA	-25	NA	46027920	46021863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
ENSMUST00000137778.2	chr4	-	669	4	FSM	ENSMUSG00000028651.13	ENSMUST00000137778.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_3	123.023936243679	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAACTTTGCTGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	123033723	123030194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUST00000137789.8	chr5	-	2071	11	FSM	ENSMUSG00000029456.13	ENSMUST00000137789.8	2071	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	15.4129815415448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCTGTTCTGAGCTAGA	NA	False	NA	-8	True	NA	NA	NA	121772960	121759091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739
ENSMUST00000137811.8	chr16	+	639	5	FSM	ENSMUSG00000098274.8	ENSMUST00000137811.8	639	5	0	0	0	0	multi-exon	FALSE	canonical	3	12575	junction_2	609.402371180159	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTGCTGATTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	55786783	55791798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ENSMUST00000137829.8	chr11	+	677	4	FSM	ENSMUSG00000071866.13	ENSMUST00000137829.8	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	36680	junction_3	786.740674484858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGCGTCCCTACCCCAT	NA	False	NA	NA	False	NA	NA	NA	6365875	6369663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6365980_6368100_6368315_6369112_6369286_6369477
ENSMUST00000137832.8	chr11	+	2165	3	FSM	ENSMUSG00000010142.13	ENSMUST00000137832.8	764	3	38	-1439	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGTATGCTTTGGTGGT	NA	False	NA	NA	False	AATAAA	-31	NA	61033324	61040198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_61033356_61037666_61037844_61038241
ENSMUST00000137840.2	chrX	-	998	3	FSM	ENSMUSG00000056679.14	ENSMUST00000137840.2	998	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTGTTTATAGGATG	NA	False	NA	NA	False	NA	NA	NA	151151700	151150011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151150266_151150416_151150507_151151046
ENSMUST00000137841.9	chr10	+	1701	5	FSM	ENSMUSG00000020265.17	ENSMUST00000137841.9	1005	5	16	-712	0	0	multi-exon	FALSE	canonical	3	61	junction_3	668.550858200033	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGCCTATGTTAAAC	NA	False	NA	25	True	AGTAAA	-18	NA	77442058	77453256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451760_77451869_77451981
ENSMUST00000137846.8	chr4	-	4531	17	FSM	ENSMUSG00000028906.18	ENSMUST00000137846.8	4531	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	32.7182575177836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131731105	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895
ENSMUST00000137859.2	chr2	+	1529	6	FSM	ENSMUSG00000038840.8	ENSMUST00000137859.2	1529	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.81575680566778	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGCTCAGCTAGGCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	180570815	180575800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180571307_180572597_180573131_180573211_180573258_180574711_180574784_180574929_180575129_180575612
ENSMUST00000137890.2	chr11	-	901	4	FSM	ENSMUSG00000017677.12	ENSMUST00000137890.2	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_3	34.7403064017704	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTGCTGGTTTTGTTTT	4622	False	NA	NA	False	NA	NA	NA	79141850	79134933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_79135390_79136995_79137128_79139216_79139486_79141806
ENSMUST00000137896.2	chr2	+	4464	4	FSM	ENSMUSG00000027130.16	ENSMUST00000137896.2	4464	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGCTGTAGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	112186539	112193508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112187937_112188112_112188298_112188850_112188985_112190760
ENSMUST00000137903.8	chr4	-	3533	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATATGGGTGTTTTTT	-9	True	NA	NA	False	NA	NA	NA	40220600	40203776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
ENSMUST00000137903.8-0	chr4	-	2461	9	FSM	ENSMUSG00000040296.16	ENSMUST00000137903.8	3533	9	0	1072	0	0	multi-exon	FALSE	canonical	3	61	junction_4	6.68487097856047	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCCAATTCATTCCCT	-9	True	NA	-10	True	AATAAA	-22	NA	40220600	40204848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398
ENSMUST00000137946.2	chr7	-	973	4	FSM	ENSMUSG00000008028.16	ENSMUST00000137946.2	973	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	6.79869268479038	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTCGAGGGGGTGGATAC	NA	False	NA	NA	False	NA	NA	NA	44023938	44009522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44009806_44010473_44010608_44012075_44012440_44023746
ENSMUST00000137953.8	chr8	+	3647	15	FSM	ENSMUSG00000001909.17	ENSMUST00000137953.8	3647	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	120.800814296485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415911	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUST00000137961.2	chr2	+	644	2	FSM	ENSMUSG00000027176.9	ENSMUST00000137961.2	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	6995	False	NA	4	True	ATTAAA	-16	NA	104420962	104439774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_104421048_104439215
ENSMUST00000137982.2	chr4	-	687	2	FSM	ENSMUSG00000028961.16	ENSMUST00000137982.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACTCTGAGGCCACACC	1210	False	NA	NA	False	NA	NA	NA	149246111	149244749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149245411_149246085
ENSMUST00000137986.2	chr2	+	765	3	FSM	ENSMUSG00000016253.13	ENSMUST00000137986.2	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	40.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGTTTCCAAGAGTAAT	NA	False	NA	-65	True	NA	NA	NA	174268154	174269190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174268423_174268609_174268740_174268823
ENSMUST00000137990.2	chr12	-	1008	7	FSM	ENSMUSG00000021087.19	ENSMUST00000137990.2	1008	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	4.27200187265877	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	False	NA	NA	False	ACTAAA	-42	NA	72283498	72259062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_72259352_72263544_72263604_72263688_72263736_72264192_72264263_72266030_72266170_72270105_72270314_72283302
ENSMUST00000138005.2	chr7	+	1709	2	FSM	ENSMUSG00000047084.9	ENSMUST00000138005.2	1709	2	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTGCTTGGTTCTCT	NA	False	NA	13	True	AATAAA	-13	NA	79910967	79915122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79911680_79914125
ENSMUST00000138010.3	chr3	+	870	3	FSM	ENSMUSG00000037894.14	ENSMUST00000138010.3	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	14469	junction_2	647	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACACAATTTTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	137570740	137572296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137570972_137571280_137571395_137571771
ENSMUST00000138068.2	chr2	-	3602	3	FSM	ENSMUSG00000089824.11	ENSMUST00000138068.2	560	3	26	-3068	-19	2603	multi-exon	FALSE	canonical	0	0	junction_2	146.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTATGTACCTTTAT	NA	False	NA	-12	True	AATAAA	-16	NA	155953855	155936801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155940293_155945268_155945350_155953825
ENSMUST00000138077.2	chr4	-	3414	2	FSM	ENSMUSG00000086810.2	ENSMUST00000138077.2	3414	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACTCAAATGC	NA	False	NA	-22	True	NA	NA	NA	154739775	154730210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154733095_154739245
ENSMUST00000138089.2	chr2	-	509	2	FSM	ENSMUSG00000026987.17	ENSMUST00000138089.2	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTAATTGACTTCTGC	9792	False	NA	NA	False	AATAAA	-17	NA	60039503	60036936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60037308_60039365
ENSMUST00000138091.8	chr3	-	3291	15	FSM	ENSMUSG00000027893.15	ENSMUST00000138091.8	3291	15	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_10	200.331778379196	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTAGTCGTGTGTCTTTTT	NA	False	NA	-2	True	ATTAAA	-25	NA	107585083	107570433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035
ENSMUST00000138116.2	chr3	-	2580	4	FSM	ENSMUSG00000027893.15	ENSMUST00000138116.2	2580	4	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_3	35.9845645921816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAACAGAAGGAAATG	NA	False	NA	NA	False	NA	NA	NA	107603821	107579051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107579453_107580751_107582471_107585035_107585148_107603473
ENSMUST00000138127.8	chr17	+	3936	8	FSM	ENSMUSG00000015597.18	ENSMUST00000138127.8	3936	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.5948764648688	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCTTCTATTCTTTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	46694676	46731846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46731340
ENSMUST00000138138.2	chr5	+	494	2	FSM	ENSMUSG00000040584.9	ENSMUST00000138138.2	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGTTCATTCGCTCCTG	NA	False	NA	NA	False	NA	NA	NA	8783287	8787656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8783740_8787614
ENSMUST00000138141.8	chr7	-	2152	13	FSM	ENSMUSG00000030741.16	ENSMUST00000138141.8	2152	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	168.693735476125	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976583	125969238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973146_125973372_125973452_125974238_125974376_125975845_125975912_125976008
ENSMUST00000138142.8	chr1	+	1851	7	FSM	ENSMUSG00000026333.15	ENSMUST00000138142.8	1851	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	19.919978804094	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATTTGTGTGTGTCTG	NA	False	NA	NA	False	CATAAA	-40	NA	97697934	97720731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_97697981_97703171_97703318_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ENSMUST00000138149.2	chrX	+	2384	8	FSM	ENSMUSG00000073125.11	ENSMUST00000138149.2	2384	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	448.163508791429	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTGGCATGAGTCATT	NA	False	NA	NA	False	AATAAA	-17	NA	72235816	72246535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72235856_72237775_72237898_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
ENSMUST00000138160.8	chr14	-	789	4	FSM	ENSMUSG00000022051.16	ENSMUST00000138160.8	789	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	323.508200136497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTTCCCTAAGCTTGA	NA	False	NA	NA	False	AAAAAG	-37	NA	67227290	67224721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67227258
ENSMUST00000138162.2	chrX	-	2717	11	FSM	ENSMUSG00000031297.15	ENSMUST00000138162.2	2717	11	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_10	85.0282306060758	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100129011	100122815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100123199_100123305_100123415_100123706_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ENSMUST00000138163.3	chr2	+	350	2	FSM	ENSMUSG00000027405.17	ENSMUST00000138163.3	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	2667	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATACCTGCCATCTAAAA	NA	False	NA	NA	False	NA	NA	NA	130116750	130117616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130117067_130117582
ENSMUST00000138166.8	chr16	-	8743	17	FSM	ENSMUSG00000022641.16	ENSMUST00000138166.8	8743	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	4.24079886342184	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCAAATACATTTCTTT	9714	False	NA	-1	True	AATAAA	-35	NA	50252753	50012206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ENSMUST00000138193.8	chr17	-	1485	5	FSM	ENSMUSG00000024054.15	ENSMUST00000138193.8	1485	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	104.868965857397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTTTCCTTGATTGA	NA	False	NA	NA	False	AATAAA	-29	NA	71663491	71651483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71663329
ENSMUST00000138202.8	chr5	-	3914	7	FSM	ENSMUSG00000029640.18	ENSMUST00000138202.8	3914	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	103.428585131105	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTTATTTGTGCTTGT	NA	False	NA	NA	False	NA	NA	NA	146695258	146671648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146694954
ENSMUST00000138235.2	chr5	+	850	2	FSM	ENSMUSG00000029622.17	ENSMUST00000138235.2	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	1736	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCCAGTGGGAGCCGAG	NA	False	NA	NA	False	NA	NA	NA	145060783	145062516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145061505_145062387
ENSMUST00000138243.2	chr7	-	1621	2	FSM	ENSMUSG00000040390.14	ENSMUST00000138243.2	1621	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACTGCGTAGTCATTGA	NA	False	NA	0	True	ACTAAA	-17	NA	27374006	27367572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27367955_27372767
ENSMUST00000138247.8	chr11	+	3931	7	FSM	ENSMUSG00000020794.14	ENSMUST00000138247.8	3931	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	366.180017963236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	False	NA	11	True	AATAAA	-20	NA	72498108	72577307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72498462_72536362_72536479_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUST00000138257.8	chr5	-	1792	11	FSM	ENSMUSG00000041313.15	ENSMUST00000138257.8	1792	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	138.018440796873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGCAAGACCAAGCTCT	490	False	NA	NA	False	NA	NA	NA	148329625	148271329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148329565
ENSMUST00000138265.2	chr11	+	1509	3	FSM	ENSMUSG00000069744.8	ENSMUST00000138265.2	1509	3	0	0	0	0	multi-exon	FALSE	canonical	3	3867	junction_2	98	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAATAAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	97594259	97598890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97594317_97594613_97594799_97597623
ENSMUST00000138283.2	chr14	+	1695	8	FSM	ENSMUSG00000053253.17	ENSMUST00000138283.2	1695	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	99.9552961302691	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCTCGTTTAGTGATT	NA	False	NA	6	True	AATAAA	-16	NA	105496187	105546305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545549
ENSMUST00000138299.2	chr11	+	6612	18	FSM	ENSMUSG00000025571.14	ENSMUST00000138299.2	6612	18	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	17.8043966421889	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGAATAAAAAAAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	117611843	117653090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ENSMUST00000138302.9	chr19	+	3900	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	42.0898509804389	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGCCGCTCCTTGTTC	NA	False	NA	24	True	AATAAA	-25	NA	46587522	46645828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
ENSMUST00000138304.8	chr8	+	2307	4	FSM	ENSMUSG00000052446.18	ENSMUST00000138304.8	2307	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	188.733203814862	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACCTGGTTCCACTTT	NA	False	NA	NA	False	NA	NA	NA	72704909	72723770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72705005_72719637_72719761_72719943_72720005_72721742
ENSMUST00000138318.2	chrX	+	3191	2	FSM	ENSMUSG00000041229.16	ENSMUST00000138318.2	3191	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150412812	150416855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150413483_150414334
ENSMUST00000138334.8	chr4	+	1279	8	FSM	ENSMUSG00000054405.15	ENSMUST00000138334.8	613	8	-63	-603	0	0	multi-exon	FALSE	canonical	3	13	junction_4	1070.81689206256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2358	False	NA	19	True	AATAAA	-19	NA	132262887	132281053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUST00000138343.2	chr10	-	2780	11	FSM	ENSMUSG00000020235.17	ENSMUST00000138343.2	2780	11	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_6	55.7831515782319	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTGGAGCCAGTGTC	NA	False	NA	-10	True	ATTAAA	-11	NA	81214297	81203205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ENSMUST00000138357.9	chr7	-	1338	4	FSM	ENSMUSG00000005575.17	ENSMUST00000138357.9	1338	4	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_3	201.644902406847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGCCTCTTCCTTC	8970	False	NA	-3	True	ATTAAA	-17	NA	12771673	12769164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12770243_12770360_12770400_12770492_12770588_12771547
ENSMUST00000138401.2	chr13	-	1946	5	FSM	ENSMUSG00000021377.16	ENSMUST00000138401.2	1946	5	0	0	0	0	multi-exon	FALSE	canonical	3	1428	junction_1	73.852894323784	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTAATCTTTGTCTGCT	NA	False	NA	-8	True	AATAAA	-27	NA	47251914	47238250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630
ENSMUST00000138436.2	chr7	+	3583	2	FSM	ENSMUSG00000030965.20	ENSMUST00000138436.2	3583	2	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGATATTTTAGTGTCTG	NA	False	NA	15	True	AATAAA	-17	NA	132481103	132486839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_132482611_132484763
ENSMUST00000138478.2	chr14	+	2157	3	FSM	ENSMUSG00000036282.16	ENSMUST00000138478.2	2157	3	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGTTCCTTATTTTTA	NA	False	NA	26	True	NA	NA	NA	49415355	49426830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_49415633_49418162_49418219_49425006
ENSMUST00000138484.3	chr11	-	1814	2	FSM	ENSMUSG00000034120.19	ENSMUST00000138484.3	1814	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGTCCTGGTCTTTTG	6878	False	NA	-8	True	ATTAAA	-28	NA	116743045	116740729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116741180_116741681
ENSMUST00000138495.2	chr16	+	1483	4	FSM	ENSMUSG00000004069.18	ENSMUST00000138495.2	1483	4	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_2	42.166337284616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGTACATGTACACAT	NA	False	NA	NA	False	AATAAA	-20	NA	4501977	4512109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075
ENSMUST00000138502.2	chr4	-	506	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	64	3136	64	0	multi-exon	FALSE	canonical	3	6653	junction_2	782.301021914767	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTTTGTTCAG	-3	True	NA	-37	True	AATAAA	-18	NA	3835601	3834469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
ENSMUST00000138521.8	chr1	+	341	3	FSM	ENSMUSG00000041684.12	ENSMUST00000138521.8	341	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAAGAGAGGGT	NA	False	NA	NA	False	NA	NA	NA	44158159	44165489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_44158336_44159333_44159435_44165425
ENSMUST00000138532.8	chr19	+	3464	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_11	13.9593059362642	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGAACGTGTCACCTA	739	False	NA	13	True	AATAAA	-16	NA	6096605	6103742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ENSMUST00000138556.2	chr10	-	641	2	FSM	ENSMUSG00000040521.12	ENSMUST00000138556.2	641	2	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACCCTCAAATTTGTTT	NA	False	NA	-24	True	TATAAA	-20	NA	126860966	126858316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_126858796_126860804
ENSMUST00000138567.9	chr4	+	1350	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	29.9457843443781	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTCATTCTCGTTGAT	-5	True	NA	9	True	AATAAA	-18	NA	24496461	24503413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ENSMUST00000138598.8	chr17	+	3250	3	FSM	ENSMUSG00000000579.15	ENSMUST00000138598.8	3250	3	0	0	0	0	multi-exon	FALSE	canonical	3	5304	junction_1	1594.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGTGTGTGTCAAACAC	NA	False	NA	NA	False	NA	NA	NA	6869190	6877173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6869236_6870885_6870928_6874010
ENSMUST00000138601.8	chr2	+	2915	19	FSM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_18	57.833947056195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001689	121029250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ENSMUST00000138603.9	chr11	-	3316	12	FSM	ENSMUSG00000006930.16	ENSMUST00000138603.9	3316	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	156.163931667075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100239686_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ENSMUST00000138604.2	chr5	-	1497	5	FSM	ENSMUSG00000029722.16	ENSMUST00000138604.2	1497	5	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	10.3289641300568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGCTGGAGAGATGGCT	1797	False	NA	NA	False	NA	NA	NA	137682955	137661071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ENSMUST00000138621.2	chr5	+	565	2	FSM	ENSMUSG00000029614.14	ENSMUST00000138621.2	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	16758	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTCCTTTTTGTG	NA	False	NA	1	True	ATTAAA	-15	NA	121346258	121347029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121346639_121346844
ENSMUST00000138635.8	chrX	-	1395	3	FSM	ENSMUSG00000031433.16	ENSMUST00000138635.8	1395	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTCCCCATACCCTCC	NA	False	NA	NA	False	NA	NA	NA	138894831	138868329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_138869349_138894046_138894252_138894660
ENSMUST00000138638.2	chr17	+	5680	3	FSM	ENSMUSG00000092558.4	ENSMUST00000138638.2	5680	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	38	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCGTTTTGGCCTTCTGG	NA	False	NA	8	True	AATAAA	-13	NA	47922532	47935173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47922618_47923887_47924043_47929733
ENSMUST00000138648.2	chr17	+	899	2	FSM	ENSMUSG00000038880.14	ENSMUST00000138648.2	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGACGAGTGCCTTTGAC	NA	False	NA	NA	False	NA	NA	NA	25114108	25115090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25114679_25114761
ENSMUST00000138662.2	chr7	+	2657	2	FSM	ENSMUSG00000040952.17	ENSMUST00000138662.2	2657	2	0	0	0	0	multi-exon	FALSE	canonical	3	12982	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAACAGAGACAAGCT	NA	False	NA	NA	False	ATTAAA	-3	NA	24584059	24587184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24584093_24584560
ENSMUST00000138666.8	chr2	+	534	7	FSM	ENSMUSG00000052533.15	ENSMUST00000138666.8	534	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	552.74607390937	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGTTTCTTGTGTATA	4875	False	NA	NA	False	TTTAAA	-1	NA	30176435	30193822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192016_30192058_30193671
ENSMUST00000138667.2	chr2	-	5288	12	FSM	ENSMUSG00000093752.2	ENSMUST00000138667.2	5288	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	157.884464505636	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	NA	False	NA	-1	True	AATAAA	-25	NA	168072284	168022905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168052350_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUST00000138677.8	chr13	+	1398	5	FSM	ENSMUSG00000021540.17	ENSMUST00000138677.8	1398	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	17.4696164811939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAACTAGTCTTCTCTTT	NA	False	NA	NA	False	AATAAA	-2	NA	56850851	56881027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662
ENSMUST00000138679.2	chr2	+	1302	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATGGACCGGAGATC	NA	False	NA	NA	False	NA	NA	NA	80667484	80668786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_80667500_80668800
ENSMUST00000138683.2	chr1	-	2455	4	FSM	ENSMUSG00000032997.17	ENSMUST00000138683.2	2455	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	53.0722777603022	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455763	75451219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75452871_75453203_75453384_75453888_75454185_75455435
ENSMUST00000138693.8	chr2	-	2221	12	FSM	ENSMUSG00000026918.17	ENSMUST00000138693.8	2221	12	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	87.7148837224691	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGCTGGAGAAGCGGC	NA	False	NA	NA	False	NA	NA	NA	27365666	27339280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ENSMUST00000138725.3	chr13	-	4845	4	FSM	ENSMUSG00000058093.14	ENSMUST00000138725.3	855	4	0	-3990	0	0	multi-exon	FALSE	canonical	3	11	junction_3	22.5437845585479	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTTGGTGTCTCTTC	NA	False	NA	-4	True	NA	NA	NA	67757806	67737557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757661
ENSMUST00000138734.2	chr10	-	1264	6	FSM	ENSMUSG00000004359.17	ENSMUST00000138734.2	646	6	0	-618	0	0	multi-exon	FALSE	canonical	3	380	junction_4	47.5815090134813	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520877	88511133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88516340_88516437_88520827
ENSMUST00000138739.8	chr4	+	1037	5	FSM	ENSMUSG00000028861.14	ENSMUST00000138739.8	1037	5	0	0	0	0	multi-exon	FALSE	canonical	3	1302	junction_3	49.8566695638608	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTACCTCCTGTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	125940769	125945758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117
ENSMUST00000138759.8	chr17	-	1074	8	FSM	ENSMUSG00000061046.10	ENSMUST00000138759.8	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	17.2496672549984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTGGTACCAGACACAC	4359	False	NA	-35	True	AATAAA	-14	NA	26004541	26001796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004401
ENSMUST00000138779.2	chr11	-	857	3	FSM	ENSMUSG00000034566.11	ENSMUST00000138779.2	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	2962	junction_2	342.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTAGTGCGTGGGCATT	NA	False	NA	NA	False	GATAAA	-37	NA	115309899	115307678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115307751_115308664_115308762_115309211
ENSMUST00000138782.2	chr11	+	856	4	FSM	ENSMUSG00000020869.9	ENSMUST00000138782.2	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	2572	junction_2	105.28163288163	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGGCATTGGATTCCCT	NA	False	NA	NA	False	NA	NA	NA	94520639	94526078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737
ENSMUST00000138800.8	chr2	+	771	3	FSM	ENSMUSG00000016344.15	ENSMUST00000138800.8	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3625	False	NA	1	True	AATAAA	-17	NA	180829328	180830297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180829680_180829796_180829894_180829974
ENSMUST00000138806.2	chr1	-	989	3	FSM	ENSMUSG00000026088.16	ENSMUST00000138806.2	989	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	23	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGGTAACGATGGGA	NA	False	NA	NA	False	NA	NA	NA	37929357	37921009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_37921780_37924295_37924398_37929240
ENSMUST00000138822.8	chr3	+	3168	11	FSM	ENSMUSG00000068917.13	ENSMUST00000138822.8	3168	11	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_2	65.9302661908778	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCCCCCAATCCCTGGA	NA	False	NA	16	True	AATAAA	-17	NA	89072125	89084226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89072414_89074341_89074512_89076001_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ENSMUST00000138843.8	chr15	-	4415	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	0	0	0	0	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGGACACACTTTAAGT	NA	False	NA	80	True	AATAAA	-19	NA	100320883	100290443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUST00000138843.8-0	chr15	-	4320	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	0	95	0	-95	multi-exon	FALSE	canonical	1	68	junction_8	31.7016648704063	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTTTGGTTTTCTTTCC	NA	False	NA	-15	True	ATTAAA	-17	NA	100320883	100290538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUST00000138861.2	chr4	+	431	2	FSM	ENSMUSG00000087307.2	ENSMUST00000138861.2	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACCATTGTGGTTCAC	NA	False	NA	9	True	NA	NA	NA	123561408	123565010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_123561541_123564711
ENSMUST00000138880.9	chr15	+	885	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	62	2774	0	0	multi-exon	FALSE	canonical	3	420	junction_1	39.9929993873928	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTGCTTGTGCT	NA	False	NA	10	True	NA	NA	NA	78819194	78825064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ENSMUST00000138885.2	chr5	+	2238	6	FSM	ENSMUSG00000029518.16	ENSMUST00000138885.2	966	6	-233	-1039	0	-578	multi-exon	FALSE	canonical	2	12	junction_2	85.478418328839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCTCCACTTGTCCA	NA	False	NA	17	True	AATAAA	-19	NA	115769966	115785217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115770258_115775774_115775826_115778142_115778263_115781426_115781552_115781633_115781759_115783691
ENSMUST00000138889.8	chr2	+	1192	4	FSM	ENSMUSG00000026857.10	ENSMUST00000138889.8	1192	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	216.499422632025	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCCCCAGGCAGTCT	NA	False	NA	11	True	AATAAA	-17	NA	30697952	30713029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30698096_30709640_30709781_30710460_30710714_30712373
ENSMUST00000138895.2	chr9	+	920	2	FSM	ENSMUSG00000015656.18	ENSMUST00000138895.2	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	16906	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGCAGGCAGGCCCAAG	2472	False	NA	NA	False	NA	NA	NA	40712584	40713794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_40713424_40713713
ENSMUST00000138936.2	chr7	-	328	2	FSM	ENSMUSG00000061787.16	ENSMUST00000138936.2	328	2	0	0	0	0	multi-exon	FALSE	canonical	3	8882	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCGGCCTCAAAACCTT	NA	False	NA	NA	False	NA	NA	NA	80994972	80994451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80994757_80994949
ENSMUST00000138939.2	chr17	+	3075	14	FSM	ENSMUSG00000024019.19	ENSMUST00000138939.2	3075	14	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_6	32.0801511011802	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29906029	29922333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ENSMUST00000138944.8	chrX	-	1275	3	FSM	ENSMUSG00000025283.16	ENSMUST00000138944.8	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	1003	junction_1	88	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTTGAACATCTTTTG	NA	False	NA	NA	False	TTTAAA	-30	NA	153997900	153996301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153996664_153996892_153996934_153997028
ENSMUST00000138950.8	chr3	+	4998	27	FSM	ENSMUSG00000037270.19	ENSMUST00000138950.8	4998	27	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	9.87106224387655	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCATAGTTGTTTCATA	2147	False	NA	3	True	AATAAA	-17	NA	37065856	37107163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084793_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ENSMUST00000138978.8	chr7	+	754	4	FSM	ENSMUSG00000045411.17	ENSMUST00000138978.8	754	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	266.241744785949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTAAGCAGAGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	43896223	43899479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896841_43897675_43897720_43898965_43899024_43899444
ENSMUST00000138998.2	chr11	+	760	5	FSM	ENSMUSG00000020739.12	ENSMUST00000138998.2	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_2	128.668177884044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	4168	False	NA	12	True	AATAAA	-18	NA	115472466	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ENSMUST00000139014.2	chr11	-	1588	2	FSM	ENSMUSG00000043993.7	ENSMUST00000139014.2	1588	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGCAGTATTGCTACCG	NA	False	NA	1	True	NA	NA	NA	120122411	120120627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120122125_120122320
ENSMUST00000139028.2	chr1	-	5641	12	FSM	ENSMUSG00000026274.12	ENSMUST00000139028.2	5641	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	41.6474776750551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATATCTCTTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	93271187	93245549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270979
ENSMUST00000139030.2	chr4	-	1377	5	FSM	ENSMUSG00000028857.17	ENSMUST00000139030.2	546	5	0	-831	0	0	multi-exon	FALSE	canonical	3	79	junction_4	309.884151740614	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTCTGTCATTTTCTT	NA	False	NA	-12	True	AATAAA	-14	NA	133005081	132993355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_133004841
ENSMUST00000139037.2	chr11	+	795	4	FSM	ENSMUSG00000010362.10	ENSMUST00000139037.2	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	159.858965619351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCAGAAGCTTGCCTTCC	NA	False	NA	NA	False	NA	NA	NA	101518797	101524658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627
ENSMUST00000139045.8	chr2	+	2770	9	FSM	ENSMUSG00000041921.17	ENSMUST00000139045.8	2770	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	11.7147076361299	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTGTGTCCAGTCTGTA	NA	False	NA	NA	False	NA	NA	NA	71283694	71355538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_71283743_71337128_71337287_71340084_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ENSMUST00000139049.2	chr12	+	1720	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	0	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAATCCATTACTGTCTT	NA	False	NA	NA	False	NA	NA	NA	57277197	57286668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_57277398_57285148
ENSMUST00000139056.3	chr1	+	548	2	FSM	ENSMUSG00000073478.7	ENSMUST00000139056.3	716	2	20	148	0	-148	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTTCAGTTTCTTCT	NA	False	NA	11	True	GATAAA	-17	NA	190956670	190957884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_190956740_190957405
ENSMUST00000139059.2	chr11	+	1811	2	FSM	ENSMUSG00000020900.16	ENSMUST00000139059.2	1811	2	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGCCTGCTCTGTTTAC	681	False	NA	-77	True	AATAAA	-18	NA	68705187	68707370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68705381_68705752
ENSMUST00000139066.8	chr4	+	4220	11	FSM	ENSMUSG00000029068.17	ENSMUST00000139066.8	4220	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_8	224.905068862398	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTCTGTGCCATCCT	4637	False	NA	NA	False	ATTAAA	-15	NA	155896957	155909000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ENSMUST00000139082.3	chr7	+	2026	6	FSM	ENSMUSG00000030512.14	ENSMUST00000139082.3	2026	6	0	0	0	0	multi-exon	FALSE	canonical	3	2772	junction_5	101.577556576244	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCCAGGACAGCCAAGG	NA	False	NA	NA	False	NA	NA	NA	65710311	65721360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65720414_65720979
ENSMUST00000139091.2	chr10	+	822	3	FSM	ENSMUSG00000025408.16	ENSMUST00000139091.2	600	3	1	-223	0	0	multi-exon	FALSE	canonical	0	0	junction_1	357	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	False	NA	29	True	AGTAAA	-18	NA	127126662	127132157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127126761_127131189_127131348_127131591
ENSMUST00000139109.8	chr10	-	1447	9	FSM	ENSMUSG00000060002.15	ENSMUST00000139109.8	1447	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.1847918123912	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACATTTCAGTGCCTC	4205	False	NA	-29	True	TATAAA	-12	NA	88339751	88308700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88308847_88311194_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ENSMUST00000139114.2	chr2	+	686	3	FSM	ENSMUSG00000008333.13	ENSMUST00000139114.2	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_1	168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTAGTAAGTCGTAG	2010	False	NA	NA	False	NA	NA	NA	142904980	142907654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_142905019_142906461_142906551_142907095
ENSMUST00000139118.2	chr7	-	2405	3	FSM	ENSMUSG00000045757.7	ENSMUST00000139118.2	2405	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGAAAGAAACAA	8640	False	NA	NA	False	TATAAA	-19	NA	127005955	127002866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127004832_127005337_127005452_127005629
ENSMUST00000139120.9	chr8	+	2115	4	FSM	ENSMUSG00000031570.18	ENSMUST00000139120.9	2115	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	12.7540843131393	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACATACTGTGTGTGTGT	NA	False	NA	13	True	AATAAA	-25	NA	26210364	26214910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26210673_26211200_26211265_26211688_26212628_26214106
ENSMUST00000139122.8	chr5	-	4560	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTTTTCTGTTTGACTT	NA	False	NA	-3	True	AATAAA	-19	NA	65650743	65604186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ENSMUST00000139122.8-0	chr5	-	1148	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	452	2960	-67	0	multi-exon	FALSE	canonical	3	378	junction_4	15.1410039297267	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTGGTTTAGAATCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	65650291	65607146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ENSMUST00000139129.9	chr11	+	5362	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	0	0	0	0	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGATTTAAGTTCTCC	6250	False	NA	20	True	AATAAA	-22	NA	87938198	87944581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ENSMUST00000139129.9-0	chr11	+	2745	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	352	2265	0	0	multi-exon	FALSE	canonical	3	1111	junction_3	192.19839287107	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCATGGTTGTCCTTTT	6602	False	NA	21	True	AATAAA	-15	NA	87938550	87942316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ENSMUST00000139143.8	chr1	-	3578	13	FSM	ENSMUSG00000042197.14	ENSMUST00000139143.8	3578	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	88.4246383462588	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853466	33800625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33844419_33844501_33852807_33852892_33853418
ENSMUST00000139156.8	chr6	+	1280	10	FSM	ENSMUSG00000061758.14	ENSMUST00000139156.8	1280	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	7.01497516340649	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACATTTTCAACTGTCAG	3069	False	NA	1	True	AATAAA	-15	NA	34361215	34373882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_34361343_34364606_34364775_34365710_34365828_34367014_34367068_34368951_34369075_34369323_34369431_34369849_34369932_34370992_34371077_34371661_34371745_34373546
ENSMUST00000139167.3	chr5	-	1797	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	3.5	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGCTGATTTTTTAC	9709	False	NA	-1	True	NA	NA	NA	115479237	115471297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115472654_115473525_115473630_115478900
ENSMUST00000139173.3	chr17	+	4517	14	FSM	ENSMUSG00000024219.17	ENSMUST00000139173.3	4517	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	9.06061115798559	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	4103	False	NA	14	True	CATAAA	-15	NA	28226318	28281573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ENSMUST00000139178.8	chr7	-	1085	5	FSM	ENSMUSG00000030541.17	ENSMUST00000139178.8	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	1616	junction_4	143.58338169858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTTACATATATATA	NA	False	NA	NA	False	NA	NA	NA	79748157	79744776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551
ENSMUST00000139200.8	chr11	-	1410	6	FSM	ENSMUSG00000035172.16	ENSMUST00000139200.8	1410	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	29.8891284583542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCCTGTGGGAGTGTTG	6422	False	NA	3	True	AAGAAA	-22	NA	101056446	101053504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101053891_101054331_101054524_101054863_101055298_101055484_101055618_101055885_101056014_101056309
ENSMUST00000139203.2	chr5	-	984	2	FSM	ENSMUSG00000035266.17	ENSMUST00000139203.2	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGCGCTCTGGGTGATTA	3242	False	NA	-1	True	ATTAAA	-20	NA	100913304	100910016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100910503_100912806
ENSMUST00000139231.2	chr6	-	944	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	53	2180	0	-55	multi-exon	FALSE	canonical	3	64	junction_2	22	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATATCTAATACTAAAA	1	True	NA	NA	False	AATAAA	-9	NA	13871464	13869913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_13870740_13871054_13871146_13871437
ENSMUST00000139253.8	chr2	+	3056	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	0	0	0	0	multi-exon	FALSE	canonical	3	5931	junction_1	722	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTTCAGTGAGTCCTGG	NA	False	NA	NA	False	AATAAA	-14	NA	121279675	121283901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121279923_121280455_121280565_121281201
ENSMUST00000139253.8-0	chr2	+	517	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	173	2366	0	0	multi-exon	FALSE	canonical	3	5931	junction_1	722	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGAGCGCCTGGTTTG	NA	False	NA	-3	True	ATTAAA	-14	NA	121279848	121281535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121279923_121280455_121280565_121281201
ENSMUST00000139263.8	chr2	-	2036	17	FSM	ENSMUSG00000027639.17	ENSMUST00000139263.8	2036	17	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	54.3495630157226	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAATATCTGCGGTTAG	NA	False	NA	-5	True	AGTAAA	-18	NA	156977040	156941320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156941424_156943240_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUST00000139295.3	chr10	+	1288	2	FSM	ENSMUSG00000025393.13	ENSMUST00000139295.3	1288	2	0	0	0	0	multi-exon	FALSE	canonical	3	9425	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTCTCTGATTGG	NA	False	NA	NA	False	NA	NA	NA	127920301	127921818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127921082_127921310
ENSMUST00000139305.2	chr4	-	754	3	FSM	ENSMUSG00000028800.16	ENSMUST00000139305.2	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	2050	junction_2	55.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGTAATCTTTGAGAT	8830	False	NA	NA	False	NA	NA	NA	129436484	129422307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129422838_129428406_129428520_129436373
ENSMUST00000139325.8	chr5	-	2044	9	FSM	ENSMUSG00000039987.16	ENSMUST00000139325.8	2044	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	42.4352447854375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGTTGTATTTATG	NA	False	NA	NA	False	AATATA	-21	NA	21087075	20993744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ENSMUST00000139337.3	chr11	+	4100	5	FSM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	6.04152298679729	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCCGAGTGGGCCTCT	NA	False	NA	NA	False	AATAAA	-22	NA	58737983	58752782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58738086_58739471_58739529_58745085_58745213_58746886_58746980_58749061
ENSMUST00000139378.2	chr11	-	773	3	FSM	ENSMUSG00000016559.15	ENSMUST00000139378.2	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	13934	junction_1	171	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGAAGATACCAATCT	NA	False	NA	NA	False	NA	NA	NA	115915299	115914334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115914362_115914450_115914605_115914707
ENSMUST00000139398.8	chr5	-	1663	5	FSM	ENSMUSG00000029433.17	ENSMUST00000139398.8	1663	5	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_2	57.6649807075317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGTTTTCAGAATTGTT	8956	False	NA	-12	True	AATAAA	-25	NA	123662205	123649767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123650771_123655799_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUST00000139413.2	chr10	-	992	4	FSM	ENSMUSG00000001783.4	ENSMUST00000139413.2	992	4	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_1	68.975035741604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAGCCAAGCGAGTGA	NA	False	NA	NA	False	CATAAA	-44	NA	85791643	85784723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_85785487_85787218_85787319_85789300_85789369_85791582
ENSMUST00000139430.2	chr11	-	608	3	FSM	ENSMUSG00000020457.14	ENSMUST00000139430.2	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	1911	junction_1	72.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGCTGGCTTTGAAC	487	False	NA	NA	False	NA	NA	NA	3202859	3200096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3200366_3202159_3202283_3202643
ENSMUST00000139485.2	chr2	-	845	2	FSM	ENSMUSG00000109865.2	ENSMUST00000139485.2	845	2	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAACAATCTTTATG	NA	False	NA	NA	False	NA	NA	NA	3499155	3497008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_3497757_3499058
ENSMUST00000139489.8	chr3	+	2717	6	FSM	ENSMUSG00000005687.15	ENSMUST00000139489.8	2717	6	0	0	0	0	multi-exon	FALSE	canonical	3	3472	junction_4	182.433111029769	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5023	False	NA	48	True	AATAAA	-16	NA	103079064	103086143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103084736_103085670
ENSMUST00000139496.8	chrX	+	3424	28	FSM	ENSMUSG00000031295.14	ENSMUST00000139496.8	3424	28	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_26	25.5172552501378	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCATTTGTAGACTCAT	NA	False	NA	7	True	CATAAA	-18	NA	159313889	159374137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369951_159371960_159372015_159373161_159373365_159373934
ENSMUST00000139511.8	chr13	-	889	6	FSM	ENSMUSG00000015937.16	ENSMUST00000139511.8	889	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	455.76511494409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGACCTGGAAATGAG	6006	False	NA	-13	True	AATAAA	-15	NA	56283343	56243368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_56243455_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ENSMUST00000139517.9	chr15	+	2997	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_4	14.7956603308487	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTGTTTTATTTTAA	NA	False	NA	7	True	AATACA	-17	NA	80861965	80896491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ENSMUST00000139518.8	chr5	-	1191	6	FSM	ENSMUSG00000004642.14	ENSMUST00000139518.8	1191	6	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_2	48.586417855199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTGTCCTCTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	33809644	33800565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUST00000139526.9	chr14	-	3603	21	FSM	ENSMUSG00000021830.15	ENSMUST00000139526.9	5045	21	0	1442	0	0	multi-exon	TRUE	canonical	3	25	junction_19	5.21152568831815	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45456882	45372363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ENSMUST00000139538.9	chr18	+	2829	5	FSM	ENSMUSG00000024516.14	ENSMUST00000139538.9	2829	5	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	12.6565200588471	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTGTGGCCTCTGA	NA	False	NA	NA	False	AATAAA	-21	NA	65933620	65950736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_65933783_65942515_65942626_65945735_65948029_65949891_65949950_65950530
ENSMUST00000139547.8	chr9	-	3662	13	FSM	ENSMUSG00000032376.13	ENSMUST00000139547.8	3662	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.5625987157394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTGGTTGAGTGTCGT	NA	False	NA	NA	False	ATTAAA	-15	NA	66500282	66423515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449896_66451227_66451311_66453025_66453108_66455153_66455238_66500065
ENSMUST00000139557.2	chr6	-	3982	4	FSM	ENSMUSG00000000416.17	ENSMUST00000139557.2	3982	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	33	False	NA	NA	False	ACTAAA	-15	NA	18514798	18431938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_18435446_18448246_18448469_18501947_18502056_18514653
ENSMUST00000139558.2	chr8	-	406	2	FSM	ENSMUSG00000031601.17	ENSMUST00000139558.2	406	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTGTGAAGTTTGGG	NA	False	NA	NA	False	NA	NA	NA	40964345	40963143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_40963259_40964054
ENSMUST00000139560.8	chr4	+	4584	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_11	46.6085071760132	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107224980	107273543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ENSMUST00000139578.8	chr1	-	2204	5	FSM	ENSMUSG00000025917.10	ENSMUST00000139578.8	2204	5	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_4	120.517633564554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10108163	10101144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ENSMUST00000139582.9	chr7	-	4262	11	FSM	ENSMUSG00000035713.16	ENSMUST00000139582.9	4262	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.83303027798234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTGTGGCGTCTGCT	NA	False	NA	26	True	AATAAA	-42	NA	96981227	96958586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96981043
ENSMUST00000139584.2	chr16	-	987	7	FSM	ENSMUSG00000022544.15	ENSMUST00000139584.2	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	22.2517165380311	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTTCTCTTTCTGTGG	NA	False	NA	-2	True	NA	NA	NA	5073820	5065238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUST00000139610.8	chr17	-	670	4	FSM	ENSMUSG00000014771.14	ENSMUST00000139610.8	670	4	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_1	13.8884444373331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAATATTAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-8	NA	15747346	15742964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_15743169_15745530_15745663_15746634_15746875_15747252
ENSMUST00000139612.2	chr6	+	899	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTGAGGATTCTGACT	NA	False	NA	6	True	NA	NA	NA	145196254	145197575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_145196516_145196937
ENSMUST00000139613.2	chr7	+	285	2	FSM	ENSMUSG00000030672.13	ENSMUST00000139613.2	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	1768	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	391	False	NA	31	True	AATAAA	-23	NA	126813067	126813459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126813156_126813262
ENSMUST00000139623.2	chr11	-	874	3	FSM	ENSMUSG00000016559.15	ENSMUST00000139623.2	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	12160	junction_2	887	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGATGGGTGATACTTC	NA	False	NA	NA	False	NA	NA	NA	115915340	115914018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115914362_115914450_115914846_115915204
ENSMUST00000139657.8	chr7	-	1352	6	FSM	ENSMUSG00000030695.17	ENSMUST00000139657.8	1352	6	0	0	0	0	multi-exon	FALSE	canonical	3	19253	junction_2	469.440773687161	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCCACTCCCTCATCT	NA	False	NA	NA	False	NA	NA	NA	126397479	126395120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815
ENSMUST00000139660.2	chr3	-	440	2	FSM	ENSMUSG00000027663.13	ENSMUST00000139660.2	440	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCAGCTCCCGCCACAG	NA	False	NA	NA	False	NA	NA	NA	32419609	32415220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32415366_32419314
ENSMUST00000139675.8	chr8	-	1746	3	FSM	ENSMUSG00000031660.14	ENSMUST00000139675.8	1746	3	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_2	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTCTTGTCTGGTTTGA	NA	False	NA	0	True	AATAAA	-35	NA	89062115	89059433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_89059653_89060365_89060510_89060732
ENSMUST00000139685.8	chr4	+	2051	4	FSM	ENSMUSG00000028936.16	ENSMUST00000139685.8	2051	4	0	0	0	0	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTGCAAGGCTTT	NA	False	NA	29	True	ATTAAA	-19	NA	152410323	152418528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000139718.10	chr19	+	1012	5	FSM	ENSMUSG00000024845.20	ENSMUST00000139718.10	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	207.505421615918	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAAGGACAGTTGCACTT	4370	False	NA	NA	False	AATAAA	-15	NA	4175958	4181725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4176200_4177055_4177121_4177548_4177836_4181227_4181282_4181360
ENSMUST00000139721.8	chr8	+	1993	9	FSM	ENSMUSG00000008167.15	ENSMUST00000139721.8	1993	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	8.18535277187245	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGCTTTCTGTGAC	NA	False	NA	25	True	AATAAA	-25	NA	85786684	85793753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUST00000139765.2	chr8	-	1090	3	FSM	ENSMUSG00000002343.12	ENSMUST00000139765.2	1090	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAGTGAGTGTAAT	NA	False	NA	-26	True	NA	NA	NA	70675439	70672847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70673528_70674755_70674894_70675167
ENSMUST00000139780.3	chr7	+	3371	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCTGTTGGAGTTTAT	NA	False	NA	33	True	AGTAAA	-30	NA	73040974	73069647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_73041245_73058979_73059498_73067064
ENSMUST00000139781.8	chr8	+	2580	3	FSM	ENSMUSG00000052446.18	ENSMUST00000139781.8	416	3	0	-2164	0	0	multi-exon	FALSE	canonical	3	50	junction_1	148.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704920	72724177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72705005_72719943_72720005_72721742
ENSMUST00000139782.8	chr8	-	1366	10	FSM	ENSMUSG00000031816.16	ENSMUST00000139782.8	1366	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	24.8282992660481	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTGTATGTTTGTG	NA	False	NA	-11	True	NA	NA	NA	121835049	121824295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121834932
ENSMUST00000139784.8	chr4	+	2700	4	FSM	ENSMUSG00000065999.14	ENSMUST00000139784.8	628	4	0	-2072	0	0	multi-exon	FALSE	canonical	3	55	junction_1	19.7540431867054	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_147637884_147661528_147661587_147665698_147665826_147667290
ENSMUST00000139793.8	chr8	+	5191	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGAGTCTTATTCTAAT	NA	False	NA	19	True	AATAAA	-20	NA	10027706	10042155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_10028020_10032863_10032971_10037384
ENSMUST00000139793.8-0	chr8	+	3028	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	10	2153	0	-2153	multi-exon	FALSE	canonical	3	35	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTTTGCTATGTAGAA	NA	False	NA	8	True	ATTAAA	-18	NA	10027716	10040002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_10028020_10032863_10032971_10037384
ENSMUST00000139806.2	chr4	+	3014	6	FSM	ENSMUSG00000028977.18	ENSMUST00000139806.2	3014	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.87054001888146	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTCTGTAAGCTGTAGT	NA	False	NA	NA	False	AATAAA	-23	NA	149017570	149024968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931
ENSMUST00000139820.8	chr8	-	2762	9	FSM	ENSMUSG00000031949.18	ENSMUST00000139820.8	2762	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	9.81070843517429	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAGGGTGACTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	112718934	112697496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ENSMUST00000139844.8	chr19	+	674	6	FSM	ENSMUSG00000024829.13	ENSMUST00000139844.8	674	6	0	0	0	0	multi-exon	FALSE	canonical	3	1812	junction_5	40.5935955539787	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTGCCAGCATTGTG	7366	False	NA	NA	False	NA	NA	NA	3333054	3339179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983
ENSMUST00000139846.2	chr11	+	447	3	FSM	ENSMUSG00000035530.14	ENSMUST00000139846.2	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	12221	junction_1	273.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGGTTTTAAGTGCTTGT	4590	False	NA	NA	False	NA	NA	NA	100211343	100212175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100211656_100211773_100211876_100212142
ENSMUST00000139852.2	chr18	-	1911	8	FSM	ENSMUSG00000024505.17	ENSMUST00000139852.2	1911	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	95.7076756779386	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTATAAGTAGCTCTA	NA	False	NA	-8	True	AATAAA	-19	NA	49867173	49830539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49862236_49862394_49866137_49866229_49867046
ENSMUST00000139863.3	chr2	+	7246	26	FSM	ENSMUSG00000035168.17	ENSMUST00000139863.3	7246	26	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	33.4578899514001	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTGGCATTCATTGCT	5949	False	NA	13	True	AATAAA	-15	NA	59477154	59676061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ENSMUST00000139875.8	chr6	-	1000	4	FSM	ENSMUSG00000030008.10	ENSMUST00000139875.8	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	61.5593661074865	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGCAACCTCCGTGGA	NA	False	NA	NA	False	NA	NA	NA	85428927	85424189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85424790_85424917_85425028_85425472_85425574_85428738
ENSMUST00000139898.2	chr3	+	689	2	FSM	ENSMUSG00000028093.16	ENSMUST00000139898.2	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	1183	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCAGCACAGTGAATGC	NA	False	NA	NA	False	NA	NA	NA	97078465	97081214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97079059_97081118
ENSMUST00000139902.8	chr2	+	3002	13	FSM	ENSMUSG00000038963.16	ENSMUST00000139902.8	3002	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	23.5743504682526	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAATGATCCTTGTGTG	NA	False	NA	3	True	AATATA	-12	NA	180098126	180116638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180107997_180108101_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ENSMUST00000139934.8	chr11	+	865	6	FSM	ENSMUSG00000020812.19	ENSMUST00000139934.8	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	27.7632851082144	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAGCATTGTGGGTAT	NA	False	NA	3	True	AATAAA	-16	NA	116562485	116566624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUST00000139959.8	chr11	+	1542	7	FSM	ENSMUSG00000020372.16	ENSMUST00000139959.8	1542	7	0	0	0	0	multi-exon	FALSE	canonical	3	5433	junction_6	484.72730019626	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTATATGTGAGTC	NA	False	NA	23	True	AATAAA	-15	NA	48691183	48696915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_48691400_48692489_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUST00000139963.2	chr2	-	1189	5	FSM	ENSMUSG00000026860.17	ENSMUST00000139963.2	1189	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	143.880158465301	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGACCCAGGGTCTGTTAG	NA	False	NA	NA	False	NA	NA	NA	30249272	30239751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30240393_30240595_30240730_30244864_30244994_30245247_30245415_30249154
ENSMUST00000139966.8	chr8	+	5261	23	FSM	ENSMUSG00000054823.18	ENSMUST00000139966.8	5261	23	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_14	32.1331488683936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGCCTCTTGAAAACAAA	9685	False	NA	NA	False	NA	NA	NA	26092299	26204997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ENSMUST00000139979.8	chr6	-	1005	5	FSM	ENSMUSG00000040250.15	ENSMUST00000139979.8	1005	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	33.7083075813663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	4009	False	NA	-2	True	AATAAA	-26	NA	146456133	146451129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989
ENSMUST00000139984.8	chr2	-	4819	3	FSM	ENSMUSG00000051149.16	ENSMUST00000139984.8	434	3	-403	-3982	0	0	multi-exon	FALSE	canonical	3	12	junction_2	76.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCTTTTATTACACAC	2917	False	NA	-1	True	AATAAA	-25	NA	168049032	168022905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168027093_168029486_168029580_168048493
ENSMUST00000139997.9	chr11	-	3476	10	FSM	ENSMUSG00000035086.14	ENSMUST00000139997.9	3476	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_6	43.6603048800878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193078	101179087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101185991_101186120_101186258_101186359_101187143_101189834_101189903_101192553_101192683_101192957
ENSMUST00000140012.8	chr8	-	3222	7	FSM	ENSMUSG00000050751.15	ENSMUST00000140012.8	3222	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	10.4083299973307	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGCTGTTAGTATGTGAT	NA	False	NA	-6	True	AATAAA	-21	NA	125161077	125095791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125097426_125098590_125098697_125100984_125101183_125102848_125103030_125106922_125107058_125110933_125111362_125160537
ENSMUST00000140024.2	chr6	-	786	2	FSM	ENSMUSG00000030342.9	ENSMUST00000140024.2	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	5253	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAAACTGAGAAGCAACC	NA	False	NA	NA	False	AAGAAA	-26	NA	125439987	125439078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125439167_125439289
ENSMUST00000140025.8	chr7	+	3341	20	FSM	ENSMUSG00000025504.15	ENSMUST00000140025.8	3341	20	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	10.3329610036278	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATATCTGTTTCTTGG	NA	False	NA	7	True	AATAAA	-19	NA	140918868	140942933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ENSMUST00000140037.8	chr17	-	970	5	FSM	ENSMUSG00000042625.17	ENSMUST00000140037.8	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	22.0949654899029	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGGACATTGGGAAGGA	NA	False	NA	NA	False	AGTAAA	-23	NA	56890046	56883330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983
ENSMUST00000140061.8	chr18	+	2235	8	FSM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	28.281384950067	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTCCATTGTTGTCC	NA	False	NA	33	True	AGTAAA	-15	NA	36780912	36798970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ENSMUST00000140076.2	chr5	-	3981	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_6	47.121226639382	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGTGTGCATTTTAA	NA	False	NA	49	True	AATAAA	-3	NA	77099425	77061122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ENSMUST00000140096.2	chr15	-	3177	2	FSM	ENSMUSG00000016552.14	ENSMUST00000140096.2	3177	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTCTGCTCTGGCATT	8486	False	NA	-2	True	AATAAA	-19	NA	77830088	77824725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_77827593_77829778
ENSMUST00000140099.2	chr7	+	786	2	FSM	ENSMUSG00000025508.14	ENSMUST00000140099.2	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	11307	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCACTATCTCATAGGTAG	2378	False	NA	NA	False	NA	NA	NA	141027543	141028529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141027621_141027820
ENSMUST00000140147.2	chr5	-	2000	8	FSM	ENSMUSG00000039987.16	ENSMUST00000140147.2	2000	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	38.2152870362805	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAGAAATTAGAATAT	NA	False	NA	NA	False	NA	NA	NA	21087076	20998299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ENSMUST00000140155.2	chr5	-	441	1	FSM	ENSMUSG00000060419.9	ENSMUST00000140155.2	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1540	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCTCAAGGATCGGGG	NA	False	NA	NA	False	NA	NA	NA	129205581	129205140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129205100_129205600
ENSMUST00000140164.8	chr2	-	2919	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	11	473	0	-177	multi-exon	FALSE	canonical	3	130	junction_4	62.0443887296789	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATGATTCCATATAT	NA	False	NA	-14	True	ATTAAA	-17	NA	22930242	22830557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUST00000140188.8	chr2	-	2484	14	FSM	ENSMUSG00000027546.16	ENSMUST00000140188.8	2484	14	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_13	32.0469330382763	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGTGTTTATTATTA	6623	False	NA	NA	False	AAGAAA	-18	NA	168583720	168508998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ENSMUST00000140226.2	chr4	-	1120	3	FSM	ENSMUSG00000047675.16	ENSMUST00000140226.2	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	8358	junction_2	2777.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAATTCAAAAGAAAT	NA	False	NA	NA	False	TTTAAA	-13	NA	117013281	117011587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117012011_117012204_117012875_117013254
ENSMUST00000140229.2	chr16	-	2982	2	FSM	ENSMUSG00000035629.20	ENSMUST00000140229.2	2982	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACGACTGTGGAATGGT	NA	False	NA	-14	True	AATAAA	-36	NA	32645290	32642076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_32644517_32644748
ENSMUST00000140236.2	chr8	+	895	5	FSM	ENSMUSG00000002395.15	ENSMUST00000140236.2	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	802	junction_3	40.4042077016738	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	False	NA	22	True	AATAAA	-23	NA	71820423	71822376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71820493_71820602_71820756_71821193_71821207_71821493_71821948_71822170
ENSMUST00000140239.4	chr8	+	2711	8	FSM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	3.65892813567591	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGTTGGCGCAGGTGTG	2370	False	NA	NA	False	AAAAAG	-33	NA	70768436	70784237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782927_70783348
ENSMUST00000140254.8	chr10	+	2038	7	FSM	ENSMUSG00000006728.13	ENSMUST00000140254.8	2038	7	0	0	0	0	multi-exon	FALSE	canonical	3	4641	junction_3	424.742274797318	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899482	126903166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
ENSMUST00000140267.10	chr19	+	938	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_2	70.8411760364142	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4370	False	NA	NA	False	AATAAA	-16	NA	4175958	4181726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUST00000140291.2	chr4	-	722	4	FSM	ENSMUSG00000057236.11	ENSMUST00000140291.2	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	460.816666365269	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	3218	False	NA	-29	True	AATAAA	-14	NA	129228437	129203309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289
ENSMUST00000140299.3	chr10	-	1402	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	245	3146	0	0	multi-exon	FALSE	canonical	3	258	junction_5	21.4513402844671	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933031	121917164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ENSMUST00000140304.2	chr17	-	1835	4	FSM	ENSMUSG00000025728.17	ENSMUST00000140304.2	1835	4	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	24.9844396019247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGCTTTTATCCTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	26160909	26152969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUST00000140322.2	chr4	+	1555	2	FSM	ENSMUSG00000029038.10	ENSMUST00000140322.2	1555	2	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTGTGGGGAAAGACAG	NA	False	NA	NA	False	AGTAAA	-22	NA	155789580	155801135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155789919_155799918
ENSMUST00000140338.2	chr2	-	931	2	FSM	ENSMUSG00000027342.15	ENSMUST00000140338.2	931	2	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGTTGTGCAAAGTTTTC	2507	False	NA	-10	True	AATAAA	-27	NA	132092090	132091081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132091616_132091693
ENSMUST00000140343.3	chr6	+	655	2	FSM	ENSMUSG00000029993.17	ENSMUST00000140343.3	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	2768	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGTATTGCTTTCTCTG	NA	False	NA	NA	False	AAGAAA	-43	NA	86986870	86990472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86986942_86989888
ENSMUST00000140364.8	chr6	+	2525	8	FSM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	0	1017	0	0	multi-exon	FALSE	canonical	3	19	junction_2	10.7437689582647	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTCTTCTTCTTAAA	NA	False	NA	18	True	AATACA	-18	NA	39550806	39564686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560744_39560997_39562660_39562790_39563774_39563829_39564302
ENSMUST00000140378.8	chr5	+	3679	11	FSM	ENSMUSG00000029283.18	ENSMUST00000140378.8	3679	11	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_7	28.5629130167075	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112257	107132298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUST00000140384.8	chrX	-	2139	10	FSM	ENSMUSG00000031134.17	ENSMUST00000140384.8	2139	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	6.66296193358442	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAAATTAGCCTT	NA	False	NA	NA	False	AATATA	-28	NA	56438341	56428889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_56429922_56430492_56430582_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437059_56438211
ENSMUST00000140391.8	chr12	-	5016	13	FSM	ENSMUSG00000047534.18	ENSMUST00000140391.8	5016	13	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_11	56.3414072123395	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219378	65179507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ENSMUST00000140400.2	chr1	-	1240	4	FSM	ENSMUSG00000026399.13	ENSMUST00000140400.2	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	12.2565175405668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCTGATTGATTTGCC	NA	False	NA	NA	False	AATAAA	-24	NA	130380153	130374397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_130375377_130376064_130376146_130377153_130377301_130380120
ENSMUST00000140402.8	chr16	-	2118	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	8	279	0	0	multi-exon	FALSE	canonical	3	16	junction_1	4.30618275001691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGTCTCACGGTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	30369388	30332787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ENSMUST00000140405.10	chr19	+	874	6	FSM	ENSMUSG00000024845.20	ENSMUST00000140405.10	874	6	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	248.896283620306	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4400	False	NA	NA	False	AATAAA	-16	NA	4175988	4181726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUST00000140420.8	chr3	-	727	4	FSM	ENSMUSG00000040562.13	ENSMUST00000140420.8	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	26.59991645768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGACTTTGTGAGTTG	2074	False	NA	NA	False	NA	NA	NA	107893737	107892376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107892466_107892562_107892645_107892933_107893426_107893673
ENSMUST00000140438.2	chr6	-	698	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	62	5313	0	0	multi-exon	FALSE	canonical	3	811	junction_2	13.9124245031395	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATAGTAAGTGTGGCCT	NA	False	NA	-9	True	AATAAA	-16	NA	92160952	92151818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
ENSMUST00000140439.8	chr9	-	1765	13	FSM	ENSMUSG00000032422.19	ENSMUST00000140439.8	1765	13	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_6	19.7924999824569	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCCTTTTGTATTTACTGT	NA	False	NA	-4	True	AATAAA	-38	NA	88280674	88258804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291
ENSMUST00000140482.2	chr2	+	3496	7	FSM	ENSMUSG00000027465.14	ENSMUST00000140482.2	3496	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	23.7323033484368	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTTTGTATCATCGC	NA	False	NA	28	True	AATAAA	-23	NA	152135791	152155916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150352_152152305_152152448_152153236_152153425_152153629
ENSMUST00000140494.2	chr2	-	4272	5	FSM	ENSMUSG00000051396.16	ENSMUST00000140494.2	2390	5	0	-1882	0	0	multi-exon	FALSE	canonical	3	6	junction_1	525.594425389007	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGGGTTTGTCTACTTC	3966	False	NA	NA	False	AATAAA	-19	NA	3513827	3505563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_3508787_3509329_3510058_3512051_3512135_3512210_3512292_3513670
ENSMUST00000140497.8	chr9	-	4795	7	FSM	ENSMUSG00000025786.18	ENSMUST00000140497.8	5380	7	-57	642	0	-642	multi-exon	FALSE	canonical	3	15	junction_5	121.464329468916	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8714	False	NA	NA	False	AATAAA	-13	NA	122942269	122895866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929323_122929658_122942060
ENSMUST00000140507.2	chr2	+	579	1	FSM	ENSMUSG00000047965.10	ENSMUST00000140507.2	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCTCAGATTTTACAT	NA	False	NA	NA	False	NA	NA	NA	70289325	70289904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70289300_70289900
ENSMUST00000140521.8	chr8	+	1551	12	FSM	ENSMUSG00000005481.19	ENSMUST00000140521.8	1551	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	911.296107223839	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441896	84449904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448094_84448154_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUST00000140523.8	chr12	+	3032	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	3.76769897358528	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGCTGGTTTTTTTTTA	NA	False	NA	8	True	NA	NA	NA	73333552	73400823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ENSMUST00000140570.8	chr2	+	3543	13	FSM	ENSMUSG00000033411.17	ENSMUST00000140570.8	3543	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	109.645134664314	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	11	True	AATAAA	-21	NA	121786960	121843096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121787099_121799550_121799761_121807815_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUST00000140575.8	chrX	+	788	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	8.37987005998436	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGTCCAAATAAATTT	NA	False	NA	9	True	ATTAAA	-14	NA	152506585	152524260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
ENSMUST00000140579.2	chr7	+	722	6	FSM	ENSMUSG00000039018.16	ENSMUST00000140579.2	722	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	23.249946236497	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTCTGCCTTCAACTAG	776	False	NA	NA	False	NA	NA	NA	139720133	139727074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723
ENSMUST00000140593.9	chr7	-	2998	12	FSM	ENSMUSG00000030986.14	ENSMUST00000140593.9	2998	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	95.5958261822716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTCTTCAATGGGTTT	NA	False	NA	-13	True	AATAAA	-15	NA	133361998	133322674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133361749
ENSMUST00000140607.8	chr5	-	4649	14	FSM	ENSMUSG00000029192.18	ENSMUST00000140607.8	4649	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	26.7829319490414	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACTGTGTACTT	9530	False	NA	-4	True	AATAAA	-18	NA	36739136	36647951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739030
ENSMUST00000140641.2	chr4	-	1543	2	FSM	ENSMUSG00000028636.15	ENSMUST00000140641.2	1543	2	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGTTTCTGGTTTTTT	5567	False	NA	-4	True	AATAAA	-30	NA	119279555	119275726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119276491_119278776
ENSMUST00000140643.8	chr1	-	3016	18	FSM	ENSMUSG00000003458.13	ENSMUST00000140643.8	3016	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	166.01196438311	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	8996	False	NA	50	True	ATTAAA	-21	NA	171910362	171893579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171903192_171903308_171908778_171908884_171910167
ENSMUST00000140659.2	chr5	+	1024	3	FSM	ENSMUSG00000058558.13	ENSMUST00000140659.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	7486	junction_1	330	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTGTGTTAAGCTG	NA	False	NA	-2	True	AATAAA	-16	NA	108051979	108055916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108052761_108055054_108055144_108055762
ENSMUST00000140663.8	chr2	-	1223	5	FSM	ENSMUSG00000070953.14	ENSMUST00000140663.8	1223	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	143.219019337517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAGAAAAAAAAAAGA	2648	False	NA	NA	False	NA	NA	NA	34689913	34675042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34675741_34680514_34680668_34685183_34685342_34687382_34687446_34689762
ENSMUST00000140675.8	chr9	+	2839	10	FSM	ENSMUSG00000034563.17	ENSMUST00000140675.8	2839	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	64.8245495335079	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAGAGTTGCCAATTA	NA	False	NA	5	True	AATAAA	-29	NA	72892886	72923620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613_72922712_72923179
ENSMUST00000140679.8	chr8	-	697	4	FSM	ENSMUSG00000090137.9	ENSMUST00000140679.8	697	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10633.6606532694	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTAGAGTGACTGT	NA	False	NA	-4	True	AATAAA	-28	NA	70963000	70960912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962767
ENSMUST00000140687.2	chr7	-	625	1	FSM	ENSMUSG00000087412.5	ENSMUST00000140687.2	625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCATGTGTAGTGTAA	NA	False	NA	-60	True	NA	NA	NA	92828852	92828227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92828200_92828900
ENSMUST00000140693.2	chr7	-	730	2	FSM	ENSMUSG00000014402.16	ENSMUST00000140693.2	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	1116	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGTGAGAGCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	46558793	46556336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46556926_46558652
ENSMUST00000140700.2	chr11	-	3093	3	FSM	ENSMUSG00000053838.15	ENSMUST00000140700.2	3093	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	6143476	6072924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6075562_6100494_6100628_6143153
ENSMUST00000140701.2	chr14	-	1289	4	FSM	ENSMUSG00000021948.18	ENSMUST00000140701.2	1289	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	11.0855260988773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCCTGTGTTTCATTAC	8038	False	NA	-68	True	NA	NA	NA	30322164	30317609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566
ENSMUST00000140702.3	chr9	-	1555	1	FSM	ENSMUSG00000066892.15	ENSMUST00000140702.3	1555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20550636	20549081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20549100_20550600
ENSMUST00000140743.8	chr10	-	1310	9	FSM	ENSMUSG00000020069.17	ENSMUST00000140743.8	1633	9	323	0	0	0	multi-exon	FALSE	canonical	3	177	junction_7	118.49762655851	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62855171_62855307_62859498
ENSMUST00000140761.9	chr9	-	1846	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_7	13.9682178931713	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	3843	False	NA	-4	True	NA	NA	NA	106076474	106072149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ENSMUST00000140765.8	chr11	+	702	3	FSM	ENSMUSG00000020456.18	ENSMUST00000140765.8	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	298.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGACCACTTGGCGGT	NA	False	NA	NA	False	NA	NA	NA	6241984	6263934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6242292_6246951_6247200_6263787
ENSMUST00000140770.2	chr12	+	3535	13	FSM	ENSMUSG00000066438.7	ENSMUST00000140770.2	3535	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.32812092461931	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTACTGGTTTCCTTTGTT	NA	False	NA	4	True	CATAAA	-5	NA	80739364	80770988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80739802_80752317_80752412_80752778_80752869_80753126_80753204_80753945_80754038_80754955_80755009_80763994_80764090_80765686_80765781_80767357_80767537_80767986_80768120_80768222_80768368_80768719_80768870_80769092
ENSMUST00000140776.2	chr2	-	2414	5	FSM	ENSMUSG00000027086.17	ENSMUST00000140776.2	2414	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	83.1519693092112	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACATTCAAGTTGC	7073	False	NA	NA	False	NA	NA	NA	69543842	69535428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ENSMUST00000140801.8	chr2	-	1023	6	FSM	ENSMUSG00000026860.17	ENSMUST00000140801.8	1023	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	143.989721855416	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGGAGGTCAGCCTGAG	NA	False	NA	NA	False	NA	NA	NA	30245377	30238079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30238630_30239237_30239250_30240299_30240393_30240595_30240730_30244864_30244994_30245272
ENSMUST00000140821.2	chr11	+	826	2	FSM	ENSMUSG00000000142.16	ENSMUST00000140821.2	826	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGGGAGAAATGTGTGG	NA	False	NA	NA	False	NA	NA	NA	108811625	108814409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_108812020_108813977
ENSMUST00000140829.2	chr17	+	6405	4	FSM	ENSMUSG00000067424.14	ENSMUST00000140829.2	758	4	0	-5647	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGTGTGAGTCACTGAT	NA	False	NA	NA	False	AATAAA	-18	NA	33311431	33329679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33311567_33321204_33321332_33321516_33321578_33323597
ENSMUST00000140832.2	chr16	+	869	4	FSM	ENSMUSG00000005982.15	ENSMUST00000140832.2	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	7.25718035235908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGTTGGCAAATGTCCA	NA	False	NA	NA	False	NA	NA	NA	3702576	3718264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735
ENSMUST00000140860.2	chr2	-	3258	5	FSM	ENSMUSG00000027610.18	ENSMUST00000140860.2	3258	5	0	0	0	0	multi-exon	FALSE	canonical	3	960	junction_4	32.2374006396297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	155416303	155406130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155406870_155408722_155409808_155413438_155413506_155414843_155414922_155415014
ENSMUST00000140877.8	chr7	+	2191	11	FSM	ENSMUSG00000042055.14	ENSMUST00000140877.8	2191	11	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	19.5611860581101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTGTTGTTTGAGTC	NA	False	NA	2	True	AATAAA	-15	NA	129226779	129237458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235454_129236541
ENSMUST00000140879.2	chr5	-	2651	2	FSM	ENSMUSG00000047215.15	ENSMUST00000140879.2	2651	2	0	0	0	0	multi-exon	FALSE	canonical	3	5084	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTCCTTGTCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	65548741	65545707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65548336_65548718
ENSMUST00000140881.3	chr7	-	483	2	FSM	ENSMUSG00000086526.3	ENSMUST00000140881.3	483	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCCCCAGATCTACAGC	NA	False	NA	NA	False	NA	NA	NA	33933527	33929844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33930112_33933311
ENSMUST00000140901.8	chr10	-	2352	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	53	652	0	224	multi-exon	FALSE	canonical	3	644	junction_9	52.0083061185946	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCGGTCTCCTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	81214297	81202707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ENSMUST00000140907.8	chr2	+	1628	4	FSM	ENSMUSG00000027397.15	ENSMUST00000140907.8	1628	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	11.8977121983832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTCGACA	NA	False	NA	NA	False	NA	NA	NA	129040720	129043098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419
ENSMUST00000140911.4	chr7	-	2101	7	FSM	ENSMUSG00000036459.16	ENSMUST00000140911.4	968	7	-450	-683	0	0	multi-exon	FALSE	canonical	3	259	junction_4	28.1286725997197	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGGTGGTTATTTCTC	NA	False	NA	-2	True	AATATA	-20	NA	33832693	33808967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818632_33824909_33825012_33831913
ENSMUST00000140920.2	chr16	-	7344	39	FSM	ENSMUSG00000039929.15	ENSMUST00000140920.2	7344	39	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_16	15.3989422955836	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTTGTACTTTGTTT	8679	False	NA	-10	True	AATAAA	-16	NA	90607280	90548414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90549067_90550210_90550811_90551698_90551941_90552961_90553160_90554630_90554741_90556686_90556831_90557278_90557386_90558510_90558623_90559154_90559316_90563542_90563652_90563904_90564077_90564918_90564983_90565089_90565201_90566275_90566470_90568356_90568416_90569467_90569655_90570151_90570351_90570936_90571790_90573012_90573193_90574241_90574461_90575935_90576130_90577090_90577262_90578398_90578538_90578944_90579062_90580163_90580284_90582989_90583103_90584215_90584333_90584971_90585102_90585822_90585997_90587962_90588101_90589573_90589770_90592248_90592374_90593245_90593381_90594780_90594867_90596907_90597005_90600214_90600348_90601335_90601488_90602285_90602426_90607086
ENSMUST00000140931.2	chr5	-	2369	4	FSM	ENSMUSG00000019295.9	ENSMUST00000140931.2	2369	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	31.3793987620328	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTACTTCATTTTGTTT	NA	False	NA	-2	True	AATAAA	-16	NA	33815243	33810562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814905
ENSMUST00000140950.8	chr2	+	648	5	FSM	ENSMUSG00000027454.11	ENSMUST00000140950.8	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	29.583568074186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAGAGGAAGACAGTTT	2445	False	NA	NA	False	NA	NA	NA	150751536	150768017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801
ENSMUST00000140975.8	chr12	-	2204	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	329	1815	0	0	multi-exon	FALSE	canonical	3	46	junction_6	17.0953209972788	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4283965	4263481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
ENSMUST00000140979.8	chr17	-	3748	12	FSM	ENSMUSG00000023927.16	ENSMUST00000140979.8	3748	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	26.0470013819583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAGAGAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52119708	52046503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_52047439_52049074_52049171_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116307_52118795
ENSMUST00000140991.2	chr11	+	3654	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGGTTTTGTGGAGT	44	False	NA	7	True	NA	NA	NA	115824107	115857551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUST00000140991.2-0	chr11	+	1223	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	355	2076	0	-886	multi-exon	FALSE	canonical	3	284	junction_4	19.7585424563656	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCATGTCAGGTGGAC	399	False	NA	16	True	ATTAAA	-17	NA	115824462	115855475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUST00000141002.8	chr11	-	1033	5	FSM	ENSMUSG00000009079.17	ENSMUST00000141002.8	1033	5	0	0	0	0	multi-exon	FALSE	canonical	3	3872	junction_4	288.767207279497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGAGACAGAGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	5029528	5021106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919
ENSMUST00000141049.2	chr17	+	1618	2	FSM	ENSMUSG00000037805.16	ENSMUST00000141049.2	1618	2	0	0	0	0	multi-exon	FALSE	canonical	3	8416	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCCTTGGTGTGCCTG	NA	False	NA	-5	True	AATAAA	-14	NA	28548251	28550001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28549672_28549803
ENSMUST00000141055.2	chr12	+	3055	5	FSM	ENSMUSG00000021203.16	ENSMUST00000141055.2	3055	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9.35414346693485	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTCTGGCTTCTTAA	8244	False	NA	NA	False	ATTAAA	-16	NA	103355024	103372604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369688_103370484
ENSMUST00000141062.8	chr10	+	429	4	FSM	ENSMUSG00000006345.11	ENSMUST00000141062.8	429	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	86.7998975933856	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGCCCGACCACGTGTAC	NA	False	NA	NA	False	NA	NA	NA	75399981	75410160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75400093_75400654_75400740_75409444_75409583_75410065
ENSMUST00000141070.8	chr7	+	890	9	FSM	ENSMUSG00000039018.16	ENSMUST00000141070.8	890	9	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	28.4074704083275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACATCATATTGTCACCC	NA	False	NA	NA	False	NA	NA	NA	139717575	139727386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139717687_139718231_139718297_139720108_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165
ENSMUST00000141079.8	chr7	-	2231	11	FSM	ENSMUSG00000030846.16	ENSMUST00000141079.8	4266	11	-20	2055	0	0	multi-exon	FALSE	canonical	3	163	junction_6	28.929051142407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063396	128044003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ENSMUST00000141112.2	chr4	-	7151	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	34.1869858279434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCTTGTTCCCCGACT	NA	False	NA	NA	False	NA	NA	NA	119089909	119077038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ENSMUST00000141116.2	chr7	-	4281	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATCCCCTAAGGACAT	6439	False	NA	-12	True	AATAAA	-20	NA	105393568	105388599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
ENSMUST00000141116.2-0	chr7	-	759	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	19	3503	0	0	multi-exon	FALSE	canonical	3	1140	junction_4	81.1861287413065	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGGGCTGATCCCTCCCAT	6458	False	NA	-30	True	AATAAA	-15	NA	105393549	105392102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
ENSMUST00000141125.8	chr1	-	2085	9	FSM	ENSMUSG00000026047.14	ENSMUST00000141125.8	2085	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_5	36.3145976158349	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	False	NA	-5	True	AATAAA	-17	NA	44157913	44146044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ENSMUST00000141138.8	chr6	-	890	4	FSM	ENSMUSG00000030042.16	ENSMUST00000141138.8	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	458.476462500167	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATGTGATATAAAATTT	NA	False	NA	-36	True	NA	NA	NA	82629501	82624296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629459
ENSMUST00000141150.2	chr4	-	2799	2	FSM	ENSMUSG00000028622.12	ENSMUST00000141150.2	2799	2	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGGTGTGAGATTGTCT	NA	False	NA	-19	True	AATAAA	-12	NA	106917147	106913081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106913302_106914568
ENSMUST00000141158.8	chr8	+	6238	23	FSM	ENSMUSG00000013033.17	ENSMUST00000141158.8	8181	23	0	1943	0	0	multi-exon	FALSE	canonical	3	37	junction_4	11.1024530086786	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATCACTTGAAGCCACC	3072	False	NA	NA	False	NA	NA	NA	84626733	84666640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ENSMUST00000141191.8	chr3	+	1449	10	FSM	ENSMUSG00000036632.10	ENSMUST00000141191.8	2972	10	0	1523	0	0	multi-exon	FALSE	canonical	3	42	junction_2	150.752270011367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTGTCCTCTTCCTTG	NA	False	NA	18	True	AATAAA	-22	NA	54642979	54657216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_54643071_54646202_54646373_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUST00000141212.2	chr6	-	1711	4	FSM	ENSMUSG00000030346.17	ENSMUST00000141212.2	1711	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	21.4631467093403	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAGGGAGGAAAAAGAGC	5265	False	NA	NA	False	NA	NA	NA	126916550	126905640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUST00000141235.8	chr4	+	3833	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACTTCGTAAAAAATACAG	NA	False	NA	NA	False	ATTAAA	-19	NA	129229487	129243664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUST00000141235.8-0	chr4	+	678	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	317	2838	0	0	multi-exon	FALSE	canonical	3	561	junction_4	57.3866031598162	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGTAGCAGTGGTCT	NA	False	NA	17	True	TTTAAA	-24	NA	129229804	129240826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUST00000141240.3	chr17	-	2696	12	FSM	ENSMUSG00000024187.16	ENSMUST00000141240.3	2696	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	77.1171696267418	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	1919	False	NA	-17	True	AATAAA	-31	NA	26463197	26431683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26432692_26432777_26432881_26433319_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
ENSMUST00000141251.2	chr6	-	1074	3	FSM	ENSMUSG00000004268.12	ENSMUST00000141251.2	1074	3	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_2	29.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGGCAAGGTACAGTC	NA	False	NA	NA	False	NA	NA	NA	124689104	124681913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124682620_124682703_124682806_124688838
ENSMUST00000141266.8	chr15	+	1033	3	FSM	ENSMUSG00000023051.12	ENSMUST00000141266.8	1033	3	0	0	0	0	multi-exon	TRUE	canonical	3	367	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGAAGAGCTGTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	102426680	102429415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102427038_102427556_102427727_102428909
ENSMUST00000141274.2	chr6	-	453	5	FSM	ENSMUSG00000023089.13	ENSMUST00000141274.2	453	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	1535.46725380257	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGTGTCCATGTTATT	504	False	NA	-32	True	ATTAAA	-26	NA	24527525	24518665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527458
ENSMUST00000141284.2	chr11	+	719	2	FSM	ENSMUSG00000020873.16	ENSMUST00000141284.2	719	2	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGATGAATAATTTTCAGAGA	NA	False	NA	NA	False	NA	NA	NA	95275731	95277137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95275940_95276626
ENSMUST00000141285.2	chr2	+	1989	6	FSM	ENSMUSG00000027397.15	ENSMUST00000141285.2	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	89.1753329121905	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATTGTCGTTCTTGAAA	NA	False	NA	NA	False	AAAACA	-18	NA	129040722	129047024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165
ENSMUST00000141308.8	chr3	-	1987	8	FSM	ENSMUSG00000027615.15	ENSMUST00000141308.8	1987	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	14.2198481578621	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTAATAATTTCCTAT	NA	False	NA	NA	False	AATAAA	-21	NA	20068288	20050327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_20051194_20056486_20056582_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186
ENSMUST00000141349.2	chr7	+	890	2	FSM	ENSMUSG00000001918.18	ENSMUST00000141349.2	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	1781	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCCTGTGAGTGCCAG	NA	False	NA	NA	False	ACTAAA	-31	NA	16527101	16529868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16527806_16529682
ENSMUST00000141357.2	chr1	-	2017	5	FSM	ENSMUSG00000013997.11	ENSMUST00000141357.2	2932	5	0	915	0	0	multi-exon	FALSE	canonical	3	137	junction_3	5.87367006223537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	884	False	NA	-10	True	AATATA	-8	NA	171173208	171169811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171172108_171172481
ENSMUST00000141364.8	chr15	-	700	10	FSM	ENSMUSG00000022487.15	ENSMUST00000141364.8	700	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	37.8499310957182	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTTTTCTCTTTATC	8453	False	NA	-55	True	NA	NA	NA	103338806	103310940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103338603_103338685_103338782
ENSMUST00000141429.8	chr12	-	4807	26	FSM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	9.02405673741029	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	6152	False	NA	-5	True	AATAAA	-19	NA	91351183	90965265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ENSMUST00000141441.8	chr2	-	2133	10	FSM	ENSMUSG00000026761.13	ENSMUST00000141441.8	2133	10	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	49.1515670473473	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTACTGCAG	NA	False	NA	NA	False	AATAAA	-15	NA	48839246	48801415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000141453.8	chr14	-	2381	12	FSM	ENSMUSG00000022185.20	ENSMUST00000141453.8	2381	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_11	154.04743285835	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGCCTTTCCTTGGG	3772	False	NA	0	True	AATAAA	-25	NA	54891124	54879617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884291_54885544_54885588_54889173_54889316_54890991
ENSMUST00000141470.2	chr2	-	1006	2	FSM	ENSMUSG00000026966.7	ENSMUST00000141470.2	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	843	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCCCCATGGCCTCTGG	NA	False	NA	-53	True	AAGAAA	-32	NA	25162450	25161097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25161594_25161940
ENSMUST00000141489.2	chr18	-	2207	2	FSM	ENSMUSG00000047989.12	ENSMUST00000141489.2	2207	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGGGTGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	24255010	24237813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24239716_24254705
ENSMUST00000141507.2	chr17	+	2775	12	FSM	ENSMUSG00000024201.13	ENSMUST00000141507.2	2775	12	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	47.9627954988668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4181	False	NA	18	True	ATTAAA	-34	NA	56700919	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56701107_56701789_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ENSMUST00000141516.8	chr11	-	3130	10	FSM	ENSMUSG00000059995.13	ENSMUST00000141516.8	3130	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	49.5759798468752	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	288	False	NA	-6	True	AATAAA	-19	NA	102184989	102180125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183979_102184101_102184148_102184471_102184495_102184669_102184768_102184959
ENSMUST00000141528.2	chrX	-	1106	4	FSM	ENSMUSG00000031328.17	ENSMUST00000141528.2	1106	4	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_2	30.6847772609735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAGTAGCCAAAGGCCT	NA	False	NA	NA	False	NA	NA	NA	73270395	73268439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73268562_73268645_73268865_73269003_73269181_73269807
ENSMUST00000141531.8	chr11	-	1503	4	FSM	ENSMUSG00000020773.12	ENSMUST00000141531.8	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	17.6131264181639	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCCCCCTTTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	115998945	115996577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603
ENSMUST00000141557.8	chr13	-	3502	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	206.169209766045	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAGGATCTGAGTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	104314933	104278663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUST00000141560.2	chr1	-	664	3	FSM	ENSMUSG00000006301.18	ENSMUST00000141560.2	664	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	69	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCCTTCATCCAAAAGG	NA	False	NA	NA	False	NA	NA	NA	74343279	74333085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74333162_74334356_74334599_74342933
ENSMUST00000141600.8	chr6	+	438	3	FSM	ENSMUSG00000029804.18	ENSMUST00000141600.8	438	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAAGCATCAAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	58808449	58820713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_58808628_58809386_58809522_58820588
ENSMUST00000141601.9	chr5	-	3018	4	FSM	ENSMUSG00000044681.20	ENSMUST00000141601.9	3018	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	83.4545784643759	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCAGTGTGGTTTTGTT	8146	False	NA	NA	False	ATTAAA	-27	NA	28450804	28405816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_28408435_28412284_28412382_28414121_28414326_28450705
ENSMUST00000141651.2	chr18	-	681	4	FSM	ENSMUSG00000044252.19	ENSMUST00000141651.2	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	8.64098759787715	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCCCCTAAAAGTGAAGTC	NA	False	NA	NA	False	NA	NA	NA	13074849	13061081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_13061393_13062064_13062151_13066636_13066760_13074688
ENSMUST00000141662.8	chr17	-	2034	11	FSM	ENSMUSG00000024426.18	ENSMUST00000141662.8	2034	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	41.2200194080498	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTCGTTTGTGCTTCA	NA	False	NA	NA	False	AAAACA	-11	NA	36220937	36210708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36211765_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUST00000141675.8	chr4	-	1009	5	FSM	ENSMUSG00000028678.14	ENSMUST00000141675.8	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_2	14.142135623731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAACAGCAGA	NA	False	NA	NA	False	NA	NA	NA	117039789	117031604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ENSMUST00000141704.8	chr7	+	2825	20	FSM	ENSMUSG00000023072.15	ENSMUST00000141704.8	2825	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_17	42.1773724634719	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCATGTTTATTTC	NA	False	NA	8	True	AATAAA	-18	NA	35096459	35138112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35129339_35129537_35131942_35132033_35134898_35135069_35137752
ENSMUST00000141721.2	chrX	+	2568	3	FSM	ENSMUSG00000002014.13	ENSMUST00000141721.2	2568	3	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_2	168.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5588	False	NA	48	True	AATAAA	-30	NA	72830789	72834432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72832560_72833405_72834031_72834259
ENSMUST00000141722.8	chr10	-	4702	26	FSM	ENSMUSG00000019790.18	ENSMUST00000141722.8	4702	26	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	7.03408842708137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTTTTATCATTTC	6006	False	NA	-4	True	ATTAAA	-11	NA	9776823	9635701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ENSMUST00000141722.8-0	chr10	-	7069	26	FSM	ENSMUSG00000019790.18	ENSMUST00000141722.8	4702	26	-164	-2203	-164	2203	multi-exon	FALSE	canonical	2	2	junction_7	7.03408842708137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAATTTTTCTGCACTTT	5842	False	NA	NA	False	AATAAA	-18	NA	9776987	9633498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ENSMUST00000141742.8	chr7	-	1226	5	FSM	ENSMUSG00000038644.15	ENSMUST00000141742.8	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	1280	junction_4	40.1022131558845	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCTGCGTAAGTGGA	NA	False	NA	NA	False	NA	NA	NA	44185382	44183319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354
ENSMUST00000141755.8	chr11	+	2745	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	0	9839	0	792	multi-exon	FALSE	canonical	3	325	junction_5	30.3892443611141	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTATTGATCCTGTTT	8494	False	NA	96	True	AATATA	-14	NA	74661655	74709512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ENSMUST00000141764.2	chr7	+	742	3	FSM	ENSMUSG00000030727.13	ENSMUST00000141764.2	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCCCAGCTGTTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	126028270	126035305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126028329_126028747_126028958_126034831
ENSMUST00000141792.8	chr7	+	493	4	FSM	ENSMUSG00000040811.16	ENSMUST00000141792.8	493	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	73.4589832642831	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTACCTGGGGCACAACG	NA	False	NA	NA	False	NA	NA	NA	18915256	18918847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18915474_18915633_18915663_18916194_18916325_18918730
ENSMUST00000141834.9	chr4	+	872	4	FSM	ENSMUSG00000028919.12	ENSMUST00000141834.9	872	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.3571255285137	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTGTTATGGCCGACGT	297	False	NA	NA	False	NA	NA	NA	140966809	140973723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485
ENSMUST00000141839.2	chr11	+	1233	4	FSM	ENSMUSG00000020328.11	ENSMUST00000141839.2	577	4	-93	-563	-93	0	multi-exon	FALSE	canonical	3	90	junction_1	492.487788906712	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624938	40630873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_40625083_40626844_40626894_40627319_40627472_40629985
ENSMUST00000141874.8	chr2	-	4375	10	FSM	ENSMUSG00000027288.17	ENSMUST00000141874.8	4375	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	347.938372576396	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTTTCATTGTTCCCT	9814	False	NA	-3	True	AATAAA	-43	NA	120394295	120356743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376383_120385711_120385797_120394167
ENSMUST00000141881.2	chr11	-	822	2	FSM	ENSMUSG00000057113.14	ENSMUST00000141881.2	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	19753	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTTTCTATTTGCTT	NA	False	NA	-33	True	AATAAA	-20	NA	33104465	33102510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_33102853_33103985
ENSMUST00000141882.2	chr4	+	573	3	FSM	ENSMUSG00000059939.14	ENSMUST00000141882.2	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	11	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGTTCAGAGGAAACTGA	NA	False	NA	NA	False	NA	NA	NA	156198352	156203993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156198459_156201466_156201561_156203620
ENSMUST00000141899.8	chr2	-	1969	13	FSM	ENSMUSG00000032046.16	ENSMUST00000141899.8	1969	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	81.835709402029	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTATTGTTTTCTCTA	NA	False	NA	-29	True	AATAAA	-14	NA	150746651	150674436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680230_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ENSMUST00000141902.8	chr5	-	2517	9	FSM	ENSMUSG00000039753.17	ENSMUST00000141902.8	2517	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	180.90536199903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	NA	False	NA	-1	True	AATAAA	-28	NA	43930942	43901957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43930785
ENSMUST00000141939.2	chr11	-	724	2	FSM	ENSMUSG00000025574.14	ENSMUST00000141939.2	724	2	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCATTTATGCCTAAACAT	NA	False	NA	-115	True	NA	NA	NA	117707480	117706449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_117706966_117707272
ENSMUST00000141948.8	chrX	-	1250	3	FSM	ENSMUSG00000041353.13	ENSMUST00000141948.8	1250	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACTTGAGAGGTATT	NA	False	NA	NA	False	GATAAA	-21	NA	149224102	149191573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149192597_149203337_149203438_149223975
ENSMUST00000141957.8	chr8	+	2460	15	FSM	ENSMUSG00000031889.10	ENSMUST00000141957.8	2460	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	68.2304019854935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGCCTCATCTTGTA	NA	False	NA	NA	False	NA	NA	NA	105951837	105979388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ENSMUST00000141961.4	chr6	-	1664	4	FSM	ENSMUSG00000030057.16	ENSMUST00000141961.4	915	4	-3	-746	0	-91	multi-exon	FALSE	canonical	3	2802	junction_2	4016.05082415826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828012	87820154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87821139_87822103_87822540_87822658_87822776_87827885
ENSMUST00000141967.2	chr13	+	838	2	FSM	ENSMUSG00000033781.8	ENSMUST00000141967.2	838	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCAGGTTATC	NA	False	NA	NA	False	NA	NA	NA	3684098	3692825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_3684176_3692064
ENSMUST00000141981.8	chr8	+	1153	5	FSM	ENSMUSG00000034656.19	ENSMUST00000141981.8	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	8.95474734428616	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGCCAACATAATCTACAC	NA	False	NA	NA	False	NA	NA	NA	85328072	85339671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85328135_85328384_85328451_85328552_85328669_85338226_85338378_85338913
ENSMUST00000142010.2	chr18	+	956	6	FSM	ENSMUSG00000014504.17	ENSMUST00000142010.2	956	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	757.224141189384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTCATCTTTAAG	NA	False	NA	-42	True	AATAAA	-12	NA	34464228	34469606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34464313_34464802_34464879_34465958_34466116_34467345_34467418_34467509_34467622_34469151
ENSMUST00000142029.2	chr4	+	1022	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	0	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGGAGTCCTGCTCTCT	NA	False	NA	29	True	ATTAAA	-18	NA	127137576	127141602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_127137692_127140695
ENSMUST00000142042.2	chr2	-	651	2	FSM	ENSMUSG00000027566.16	ENSMUST00000142042.2	651	2	0	0	0	0	multi-exon	FALSE	canonical	3	4551	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	179680614	179679426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_179679981_179680517
ENSMUST00000142045.8	chr4	+	1843	20	FSM	ENSMUSG00000028292.15	ENSMUST00000142045.8	1843	20	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	142.027152021567	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	5	True	NA	8	True	AATAGA	-23	NA	34614973	34660163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630476_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUST00000142064.8	chr9	-	3489	23	FSM	ENSMUSG00000043067.16	ENSMUST00000142064.8	3489	23	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_1	49.1071732317176	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414436	24323073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ENSMUST00000142075.8	chr7	+	2939	8	FSM	ENSMUSG00000042105.19	ENSMUST00000142075.8	2939	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	6.5121550400237	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGCGTATGAGAATTTC	NA	False	NA	15	True	ATTAAA	-21	NA	128281409	128297998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ENSMUST00000142087.2	chr2	-	795	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	9.85837207656518	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTCTGTGGGTGAAGC	NA	False	NA	31	True	ATTAAA	-14	NA	25512017	25510078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
ENSMUST00000142105.8	chr7	-	536	6	FSM	ENSMUSG00000025466.20	ENSMUST00000142105.8	536	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	173.251262621662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTGTGGTGAGTTCC	1536	False	NA	0	True	NA	NA	NA	139682289	139679382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139679536_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
ENSMUST00000142125.2	chr4	-	673	2	FSM	ENSMUSG00000043962.17	ENSMUST00000142125.2	673	2	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTCGGTCCCGAAGC	7058	False	NA	NA	False	NA	NA	NA	126096169	126080282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126080382_126095595
ENSMUST00000142127.8	chr2	-	851	6	FSM	ENSMUSG00000051730.16	ENSMUST00000142127.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	209.013492387453	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTTGTCTCTAGCAC	6824	False	NA	-21	True	AATAAA	-18	NA	69715941	69701557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69711110_69711293_69711640_69711756_69715592
ENSMUST00000142131.2	chr2	-	2740	5	FSM	ENSMUSG00000036160.14	ENSMUST00000142131.2	748	5	-89	-1903	0	0	multi-exon	FALSE	canonical	3	14	junction_4	123.331615979034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGTTCGTATTTG	NA	False	NA	-6	True	NA	NA	NA	26792891	26780783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792599
ENSMUST00000142141.3	chr17	+	451	2	FSM	ENSMUSG00000048731.16	ENSMUST00000142141.3	451	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTAGCGCCGGTTAATA	NA	False	NA	22	True	AGTAAA	-14	NA	27236960	27241491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27237145_27241224
ENSMUST00000142142.8	chrX	+	916	3	FSM	ENSMUSG00000008682.14	ENSMUST00000142142.8	916	3	0	0	0	0	multi-exon	FALSE	canonical	3	9221	junction_2	191	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGCAAGGATGGCTTT	NA	False	NA	NA	False	AATACA	-10	NA	73314561	73315829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73315325_73315405_73315514_73315784
ENSMUST00000142145.2	chr1	+	615	4	FSM	ENSMUSG00000025995.17	ENSMUST00000142145.2	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	68.9025076144225	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCCAGGCAAGGATTT	NA	False	NA	NA	False	NA	NA	NA	45834662	45841515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198
ENSMUST00000142187.8	chr6	-	917	5	FSM	ENSMUSG00000004268.12	ENSMUST00000142187.8	917	5	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_4	110.261904119238	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGACTGCAGAGTGGGG	NA	False	NA	-91	True	NA	NA	NA	124689032	124681420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124681622_124681901_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUST00000142231.8	chr2	-	3109	28	FSM	ENSMUSG00000040479.13	ENSMUST00000142231.8	3109	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	57.6209409807422	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91795945	91763171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91795764
ENSMUST00000142240.2	chrX	-	1245	1	FSM	ENSMUSG00000087522.4	ENSMUST00000142240.2	1245	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCGCTGGACCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	94042289	94041044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_94041000_94042300
ENSMUST00000142241.2	chr19	-	2152	2	FSM	ENSMUSG00000024742.16	ENSMUST00000142241.2	2152	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACCAGAATGTGTCTGAA	2204	False	NA	NA	False	AATAAA	-10	NA	10181258	10176505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10178462_10181062
ENSMUST00000142271.2	chr2	+	1588	4	FSM	ENSMUSG00000032966.15	ENSMUST00000142271.2	1588	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	1089.25550517569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151385818	151403610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151386061_151399305_151399419_151401377_151401541_151402540
ENSMUST00000142281.8	chr4	+	1837	8	FSM	ENSMUSG00000054405.15	ENSMUST00000142281.8	1837	8	0	0	0	0	multi-exon	FALSE	canonical	3	2684	junction_7	240.501516818162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCGTTGTGTCCTTGCT	2348	False	NA	1	True	NA	NA	NA	132262877	132280972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUST00000142316.2	chr16	+	719	2	FSM	ENSMUSG00000022945.13	ENSMUST00000142316.2	719	2	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCATCTGGAGGAGATG	4481	False	NA	NA	False	NA	NA	NA	93680903	93682359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93681510_93682246
ENSMUST00000142337.7	chr7	-	1851	5	FSM	ENSMUSG00000059772.13	ENSMUST00000142337.7	1390	5	-21	-440	0	0	multi-exon	FALSE	canonical	3	27	junction_4	31.8276609256791	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGTTCTAGCCG	5026	False	NA	NA	False	NA	NA	NA	126294917	126289849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126294596
ENSMUST00000142342.8	chr4	-	2118	10	FSM	ENSMUSG00000025413.14	ENSMUST00000142342.8	2118	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	94.503380304034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATCTTGTGTTGTTTGTG	NA	False	NA	-3	True	ATTAAA	-37	NA	106535883	106519456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535690
ENSMUST00000142351.9	chr17	-	1973	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACCCACCCACATACACA	NA	False	NA	NA	False	NA	NA	NA	46343295	46329468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ENSMUST00000142351.9-0	chr17	-	3523	8	FSM	ENSMUSG00000023951.19	ENSMUST00000142351.9	1973	8	0	-1550	0	0	multi-exon	FALSE	canonical	3	122	junction_2	174.18943476478	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343295	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ENSMUST00000142376.2	chr2	+	1688	13	FSM	ENSMUSG00000039050.9	ENSMUST00000142376.2	1688	13	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_6	20.4306074853936	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACATATGTTGCTTAAAA	NA	False	NA	NA	False	AATGAA	-18	NA	179761196	179801085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821
ENSMUST00000142395.8	chr8	+	5130	24	FSM	ENSMUSG00000054823.18	ENSMUST00000142395.8	10105	24	0	4975	0	0	multi-exon	FALSE	canonical	3	27	junction_15	30.6634885068579	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGATCAGTGTAAAGCCTAA	9685	False	NA	NA	False	ATTAAA	-17	NA	26092299	26204719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26168731_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ENSMUST00000142407.8	chr5	+	4893	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTTTTATATCTCATT	NA	False	NA	12	True	AATAAA	-20	NA	65694575	65756331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUST00000142407.8-0	chr5	+	992	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	58	3843	0	0	multi-exon	FALSE	canonical	0	0	junction_2	503.727025944277	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694633	65752488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUST00000142422.8	chr8	+	1097	7	FSM	ENSMUSG00000060038.15	ENSMUST00000142422.8	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	32.4704994315353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGTCAGTCTGCATC	NA	False	NA	12	True	AATAAA	-18	NA	85799686	85801780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUST00000142438.8	chr4	+	2773	15	FSM	ENSMUSG00000006215.13	ENSMUST00000142438.8	3478	15	0	705	0	0	multi-exon	FALSE	canonical	3	129	junction_3	19.043987749097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCCTGTGGTCCCTGTG	NA	False	NA	5	True	AATAAA	-15	NA	141171994	141194536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ENSMUST00000142440.2	chr4	-	917	3	FSM	ENSMUSG00000059291.16	ENSMUST00000142440.2	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	10574	junction_1	310	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGGAATCACATACTGGA	NA	False	NA	NA	False	NA	NA	NA	135780017	135777943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135778614_135778924_135779032_135779877
ENSMUST00000142473.8	chr5	+	2168	6	FSM	ENSMUSG00000036817.15	ENSMUST00000142473.8	2168	6	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_1	167.541039748475	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAAATATTCTTCT	NA	False	NA	NA	False	NA	NA	NA	139186421	139214094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460
ENSMUST00000142481.8	chr2	-	3573	7	FSM	ENSMUSG00000039536.17	ENSMUST00000142481.8	3573	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	29.0138855645974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGTCTTTTTCCAATT	NA	False	NA	-21	True	AATAAA	-9	NA	166797304	166790066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166794393_166795127_166795272_166796819
ENSMUST00000142494.8	chr9	-	2173	10	FSM	ENSMUSG00000031922.13	ENSMUST00000142494.8	2173	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	82.7754660378169	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAACAAAGGCTTTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	13738287	13719087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_13720137_13721155_13721301_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUST00000142506.2	chr15	+	2416	3	FSM	ENSMUSG00000033728.15	ENSMUST00000142506.2	3943	3	-30	1557	0	0	multi-exon	FALSE	canonical	3	39	junction_1	41.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	76594842	76599291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76595128_76597066_76598186_76598279
ENSMUST00000142519.3	chr7	+	1153	8	FSM	ENSMUSG00000030588.13	ENSMUST00000142519.3	1153	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	530.605237787328	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGGCCTTCTTCTCCTT	6235	False	NA	28	True	NA	NA	NA	28937951	28947022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28938019_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUST00000142526.9	chr17	-	1175	7	FSM	ENSMUSG00000023795.17	ENSMUST00000142526.9	1175	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	5.63964143856288	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTCTTGGTTGTGGCTGC	NA	False	NA	NA	False	NA	NA	NA	3134357	3126852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_3127058_3127567_3127722_3127962_3128110_3129274_3129414_3129629_3129867_3131143_3131310_3134230
ENSMUST00000142531.8	chr2	+	2970	8	FSM	ENSMUSG00000037761.17	ENSMUST00000142531.8	2970	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	38.2691861978394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGTGTTTATTCTG	NA	False	NA	NA	False	TTTAAA	-13	NA	158466807	158481118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158478068_158478587_158478721_158480552
ENSMUST00000142554.8	chr2	+	6485	12	FSM	ENSMUSG00000026842.17	ENSMUST00000142554.8	3268	12	-15	-3202	0	0	multi-exon	FALSE	canonical	0	0	junction_2	72.0707870576383	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGGTCTGTGATTC	5740	False	NA	20	True	AATAAA	-21	NA	31578548	31693553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31579955_31585760_31585905_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUST00000142557.8	chr7	-	405	4	FSM	ENSMUSG00000025102.15	ENSMUST00000142557.8	405	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	121.858752478251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCACTTCCTTGTGGGG	NA	False	NA	NA	False	AATAAA	-12	NA	81439217	81432778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81432887_81435824_81435953_81438197_81438325_81439175
ENSMUST00000142572.8	chr7	+	2519	5	FSM	ENSMUSG00000038611.18	ENSMUST00000142572.8	2519	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	95.4865828271177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	3522	False	NA	84	True	NA	NA	NA	140839102	140842663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
ENSMUST00000142577.2	chr4	-	4918	9	FSM	ENSMUSG00000053841.16	ENSMUST00000142577.2	4918	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	26.4007575648882	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	8285	False	NA	-10	True	ATTAAA	-17	NA	129534433	129519875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
ENSMUST00000142585.2	chr4	-	630	3	FSM	ENSMUSG00000028675.13	ENSMUST00000142585.2	630	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	185.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGCTCATAAGAAAAAGG	NA	False	NA	NA	False	AATAGA	-36	NA	135600881	135599634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135599766_135600205_135600411_135600587
ENSMUST00000142609.8	chr1	-	2769	4	FSM	ENSMUSG00000042066.17	ENSMUST00000142609.8	2769	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.490737563232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGAGGTCTGCTG	NA	False	NA	-1	True	AATAAA	-22	NA	132295625	132284053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132295435
ENSMUST00000142643.2	chr15	-	505	3	FSM	ENSMUSG00000058600.14	ENSMUST00000142643.2	505	3	0	0	0	0	multi-exon	FALSE	canonical	3	4307	junction_1	417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	675	False	NA	-20	True	AATAAA	-27	NA	34443054	34440650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34440751_34441377_34441509_34442780
ENSMUST00000142654.8	chr13	+	1213	3	FSM	ENSMUSG00000021504.15	ENSMUST00000142654.8	1213	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	36.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAATGCAATTAAGAG	NA	False	NA	NA	False	NA	NA	NA	55747877	55755831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55748006_55751932_55752196_55755009
ENSMUST00000142660.8	chr4	-	3043	8	FSM	ENSMUSG00000012117.14	ENSMUST00000142660.8	3043	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	24.9995918334027	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAGATACAAGGTTTG	NA	False	NA	NA	False	AAAAAG	-15	NA	133727704	133696373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721641_133724132_133724250_133727579
ENSMUST00000142683.8	chr14	+	1561	3	FSM	ENSMUSG00000022010.20	ENSMUST00000142683.8	797	3	0	-764	0	0	multi-exon	FALSE	canonical	3	75	junction_1	1130	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	3103	False	NA	28	True	AATAAA	-18	NA	76725198	76745202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76725365_76742688_76742738_76743856
ENSMUST00000142685.8	chr8	+	754	3	FSM	ENSMUSG00000002395.15	ENSMUST00000142685.8	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGATGGTTCCCAGCAC	NA	False	NA	NA	False	NA	NA	NA	71820027	71821329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71820493_71820602_71820756_71821193
ENSMUST00000142690.2	chr18	-	1256	5	FSM	ENSMUSG00000063889.17	ENSMUST00000142690.2	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	27.3072792493137	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTAGTCTTGTGCATTT	-5	True	NA	-6	True	AATAAA	-12	NA	3337574	3294481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_3295183_3295321_3295417_3299161_3299309_3325360_3325479_3337379
ENSMUST00000142701.3	chr5	+	851	3	FSM	ENSMUSG00000029458.15	ENSMUST00000142701.3	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACATTGGCCTTTTTTTTT	2394	False	NA	NA	False	NA	NA	NA	121800112	121803704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121800225_121801358_121801555_121803161
ENSMUST00000142704.8	chr1	+	2976	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	36.8929090028677	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTTAAGAAATTTCGAA	NA	False	NA	3	True	AATAAA	-14	NA	78635599	78684684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUST00000142712.2	chr19	+	414	2	FSM	ENSMUSG00000044387.6	ENSMUST00000142712.2	414	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGAAACATCGCTAG	NA	False	NA	NA	False	NA	NA	NA	23112263	23113081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_23112319_23112722
ENSMUST00000142718.8	chr2	-	2942	16	FSM	ENSMUSG00000027201.17	ENSMUST00000142718.8	2942	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	238.581306895574	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965543	124929660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124955971_124957357_124957411_124958584_124958794_124965304
ENSMUST00000142724.8	chr4	-	883	4	FSM	ENSMUSG00000051557.16	ENSMUST00000142724.8	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	42.5519290592879	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACTAGCCTTTCACTATG	9135	False	NA	NA	False	NA	NA	NA	155976183	155974950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155975127_155975209_155975360_155975508_155975697_155975814
ENSMUST00000142734.8	chr14	+	950	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	103	366	0	0	multi-exon	TRUE	canonical	3	33	junction_1	23.7941169199447	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACCCATCGCTTTGGGG	NA	False	NA	1	True	AATAAA	-14	NA	47611372	47623251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUST00000142735.8	chr4	+	581	4	FSM	ENSMUSG00000028936.16	ENSMUST00000142735.8	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCGGTGGTTTATCCTT	NA	False	NA	12	True	AATAAA	-11	NA	152410198	152416933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000142736.9	chr9	-	1761	8	FSM	ENSMUSG00000011114.19	ENSMUST00000142736.9	1761	8	0	0	0	0	multi-exon	FALSE	canonical	3	1493	junction_5	98.6130346974724	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTATTTGTTTCTTCTTGT	NA	False	NA	-20	True	AATAAA	-18	NA	37568533	37560477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUST00000142739.8	chr11	-	4444	11	FSM	ENSMUSG00000017376.16	ENSMUST00000142739.8	4444	11	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_6	8.57962703152066	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTCGCTGTCTTATTTCC	NA	False	NA	-1	True	ATTAAA	-19	NA	78588199	78457993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
ENSMUST00000142746.2	chr5	+	1531	6	FSM	ENSMUSG00000029387.11	ENSMUST00000142746.2	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_4	45.3148982123981	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCAACTGTAACCTGAG	3313	False	NA	NA	False	AATAAA	-16	NA	124728441	124734650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ENSMUST00000142761.2	chr6	-	554	2	FSM	ENSMUSG00000001642.19	ENSMUST00000142761.2	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGGTGGTCCGTTTTG	6287	False	NA	-5	True	AATAAA	-16	NA	34283622	34280868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_34281275_34283474
ENSMUST00000142768.8	chr2	-	862	4	FSM	ENSMUSG00000018770.10	ENSMUST00000142768.8	862	4	0	0	0	0	multi-exon	FALSE	canonical	3	2058	junction_3	1115.93219626762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTGTTGTGTCTCTTT	NA	False	NA	-121	True	NA	NA	NA	73741626	73739074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73739722_73740207_73740286_73741298_73741405_73741595
ENSMUST00000142775.2	chr9	-	4001	2	FSM	ENSMUSG00000037287.16	ENSMUST00000142775.2	2327	2	0	-1674	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	4354	False	NA	-1	True	ATTAAA	-17	NA	42339534	42323611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_42327446_42339367
ENSMUST00000142788.8	chr11	-	899	7	FSM	ENSMUSG00000018565.18	ENSMUST00000142788.8	899	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	199.487468278085	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGTAATGCTTAAACAAG	9880	False	NA	2	True	AATAAA	-32	NA	69871098	69859047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69870655_69870737_69870824_69870886_69871039
ENSMUST00000142797.2	chr2	-	632	4	FSM	ENSMUSG00000002550.17	ENSMUST00000142797.2	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	8.2192186706253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAACGGGACCCAAATC	NA	False	NA	NA	False	NA	NA	NA	32149645	32147858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32148197_32148288_32148432_32148582_32148680_32149591
ENSMUST00000142819.8	chr10	+	1495	8	FSM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_6	22.8937207325413	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAAGCCTGGCTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	59715439	59732597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171
ENSMUST00000142820.8	chr2	+	1820	6	FSM	ENSMUSG00000027519.11	ENSMUST00000142820.8	7045	6	96	5129	0	1032	multi-exon	FALSE	canonical	3	18	junction_2	72.9191332916128	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTAGTCCTTCCTGC	NA	False	NA	8	True	AATAAA	-21	NA	173501648	173543979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_173501935_173503224_173503305_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ENSMUST00000142821.8	chr10	-	1283	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142821.8	1283	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGGTGAATGACTGAC	NA	False	NA	-10	True	AATAAA	-21	NA	61946724	61943988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_61944903_61945662_61945792_61946484
ENSMUST00000142861.2	chr2	+	1460	5	FSM	ENSMUSG00000001999.16	ENSMUST00000142861.2	1460	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	50.701947694344	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAAAAAGAGG	2209	False	NA	NA	False	AAAAAG	-43	NA	126912584	126929790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764
ENSMUST00000142867.8	chr12	-	2146	7	FSM	ENSMUSG00000020634.13	ENSMUST00000142867.8	2146	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	462.20356866741	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAAAAGCAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	4957264	4929348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957140
ENSMUST00000142884.2	chr4	-	482	3	FSM	ENSMUSG00000028639.15	ENSMUST00000142884.2	482	3	0	0	0	0	multi-exon	FALSE	canonical	3	10083	junction_2	12	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAAAGTGTAGTAGAGT	NA	False	NA	NA	False	NA	NA	NA	119151677	119142198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119142340_119150938_119151003_119151400
ENSMUST00000142890.8	chr3	+	3000	8	FSM	ENSMUSG00000028152.11	ENSMUST00000142890.8	3000	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	43.0926860596637	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4935	False	NA	19	True	AATAAA	-32	NA	138448065	138610187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602613_138602676_138603873_138603922_138604027_138604145_138608139
ENSMUST00000142920.8	chr1	+	2724	7	FSM	ENSMUSG00000026005.16	ENSMUST00000142920.8	2724	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	377.976373453274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	False	NA	5	True	ATTAAA	-12	NA	66739989	66758964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_66740188_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUST00000142948.8	chr10	-	1961	14	FSM	ENSMUSG00000034758.13	ENSMUST00000142948.8	1961	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	19.8357158000858	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTCCTTTACCCAG	NA	False	NA	-14	True	NA	NA	NA	81436709	81426737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ENSMUST00000142957.6	chr5	-	2084	7	FSM	ENSMUSG00000023452.20	ENSMUST00000142957.6	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	252.221904062452	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32942983	32893665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32942892
ENSMUST00000142975.8	chr2	-	3466	15	FSM	ENSMUSG00000074643.13	ENSMUST00000142975.8	3466	15	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_14	29.7565804761342	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953808	155913764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920895_155920982_155921163_155921258_155921385_155953705
ENSMUST00000142980.2	chr18	+	662	3	FSM	ENSMUSG00000024608.12	ENSMUST00000142980.2	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	20921	junction_1	3556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGACTTAAATGGGGGC	NA	False	NA	NA	False	NA	NA	NA	60907737	60910491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60907759_60909472_60909624_60910001
ENSMUST00000142994.8	chr19	+	2051	8	FSM	ENSMUSG00000025227.15	ENSMUST00000142994.8	2051	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	80.873294701764	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4253	False	NA	13	True	AGTAAA	-13	NA	46345373	46363691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46345424_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
ENSMUST00000142995.8	chr19	-	725	4	FSM	ENSMUSG00000024826.16	ENSMUST00000142995.8	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_3	29.4882274061286	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTTTTGTTAGAGACTT	1374	False	NA	NA	False	NA	NA	NA	5962797	5955153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUST00000142997.8	chr10	-	1118	4	FSM	ENSMUSG00000035478.15	ENSMUST00000142997.8	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_3	65.3214274866134	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80231004	80228372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897
ENSMUST00000143024.2	chr9	+	943	4	FSM	ENSMUSG00000039285.13	ENSMUST00000143024.2	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	11.5181016954473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGCCATAAACCTCATT	9773	False	NA	NA	False	NA	NA	NA	117869754	117879288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964
ENSMUST00000143039.8	chr9	-	3260	9	FSM	ENSMUSG00000039048.16	ENSMUST00000143039.8	3260	9	0	0	0	0	multi-exon	TRUE	canonical	3	185	junction_7	18.9917745353087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122266	35115503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711
ENSMUST00000143051.8	chr2	-	3093	15	FSM	ENSMUSG00000090100.8	ENSMUST00000143051.8	3093	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	10.0369216355597	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATAAGCTATTTAAA	NA	False	NA	NA	False	NA	NA	NA	120680871	120576151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120655722_120655797_120680536
ENSMUST00000143052.2	chr11	+	3915	5	FSM	ENSMUSG00000018377.11	ENSMUST00000143052.2	3915	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	48.295962564173	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGGACTGTTAATGCCGC	NA	False	NA	17	True	ATTAAA	-22	NA	87964413	87975555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_87964578_87965487_87965552_87966998_87967201_87969228_87969382_87972223
ENSMUST00000143054.2	chr3	+	1290	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	0	1153	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.4986771653491	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	14	True	AATAAA	-23	NA	108479014	108489385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
ENSMUST00000143082.4	chr7	-	1513	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	19	3196	0	0	multi-exon	FALSE	canonical	3	340	junction_6	40.4362573576105	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATCGGGATGATGGT	NA	False	NA	-12	True	AATAAA	-24	NA	46360085	46338727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ENSMUST00000143104.2	chr4	-	2948	2	FSM	ENSMUSG00000039740.7	ENSMUST00000143104.2	531	2	-356	-2061	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCAGTTTATGGTTGCG	-17	True	NA	-2	True	AATAAA	-15	NA	47474333	47469832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_47472386_47473938
ENSMUST00000143107.2	chr7	+	1158	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	0	0	0	0	multi-exon	FALSE	canonical	3	7451	junction_1	3855.66202972978	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCTTTAAATCTGGAAG	NA	False	NA	20	True	AATAAA	-24	NA	109118353	109121574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ENSMUST00000143127.8	chr4	+	375	3	FSM	ENSMUSG00000085101.8	ENSMUST00000143127.8	375	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	48	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCACCTTCCAGGTCA	NA	False	NA	NA	False	NA	NA	NA	145136814	145159135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145136997_145138756_145138851_145159036
ENSMUST00000143137.2	chr17	-	4445	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	11.5854314646552	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATATCAGCCTTC	NA	False	NA	NA	False	AATAAA	-9	NA	44416655	44407206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
ENSMUST00000143142.8	chrX	+	2766	12	FSM	ENSMUSG00000035967.16	ENSMUST00000143142.8	2766	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	17.6625859417233	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATTTCTAGGTGTATGT	NA	False	NA	14	True	AATAAA	-25	NA	55529177	55553198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUST00000143171.2	chr11	-	305	2	FSM	ENSMUSG00000038909.17	ENSMUST00000143171.2	305	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCCTCAGCCAGGCTAA	NA	False	NA	NA	False	NA	NA	NA	95200395	95196909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_95197023_95200203
ENSMUST00000143174.2	chr16	+	2370	2	FSM	ENSMUSG00000022711.17	ENSMUST00000143174.2	2370	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	8455601	8462880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_8455693_8460601
ENSMUST00000143180.8	chr9	-	2257	16	FSM	ENSMUSG00000032507.16	ENSMUST00000143180.8	2257	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	14.1254695103876	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCATGTAGAATGGATG	NA	False	NA	-12	True	AGTAAA	-11	NA	113855794	113807104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113833104_113833263_113847056_113847119_113855760
ENSMUST00000143199.2	chr2	-	660	2	FSM	ENSMUSG00000026849.19	ENSMUST00000143199.2	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGGCTACCGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	30857900	30856922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30857368_30857685
ENSMUST00000143203.8	chr11	-	5985	18	FSM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_15	2.25532817796245	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTGCTAGATTTTCTTT	NA	False	NA	NA	False	AGTAAA	-32	NA	90528910	90367317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_90371541_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
ENSMUST00000143219.8	chr11	+	3761	12	FSM	ENSMUSG00000017781.18	ENSMUST00000143219.8	3761	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	251.085083205404	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACAGTATGGATTCGGGC	NA	False	NA	NA	False	AATAAA	-24	NA	75478922	75519630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75498932_75498941_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ENSMUST00000143231.2	chr7	+	827	3	FSM	ENSMUSG00000008373.17	ENSMUST00000143231.2	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	159.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAAATAAACATG	2940	False	NA	NA	False	AAAAAG	-2	NA	3632990	3634420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3633056_3633556_3633742_3633843
ENSMUST00000143260.2	chr13	-	2509	5	FSM	ENSMUSG00000074863.6	ENSMUST00000143260.2	2509	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	116.358014335068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTATGGGTGCATATTT	5491	False	NA	-4	True	ATTAAA	-17	NA	62874503	62847219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62849306_62853514_62853576_62853943_62854071_62871911_62872032_62874388
ENSMUST00000143308.2	chr14	+	1680	5	FSM	ENSMUSG00000021775.12	ENSMUST00000143308.2	1680	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	13.5462171841441	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGATCTTTTAGC	NA	False	NA	NA	False	NA	NA	NA	4230664	4255160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202
ENSMUST00000143314.8	chr16	-	3565	6	FSM	ENSMUSG00000050312.13	ENSMUST00000143314.8	3565	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	5.49181208709839	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	False	NA	NA	False	ATTAAA	-18	NA	62607140	62552806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596747_62606150_62606261_62607033
ENSMUST00000143349.8	chr2	-	1923	5	FSM	ENSMUSG00000027184.15	ENSMUST00000143349.8	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	1726	junction_3	119.813135757312	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	2740	False	NA	-9	True	NA	NA	NA	103603126	103597451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013
ENSMUST00000143398.3	chr2	+	2100	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAACCAGAGAGAGCTACA	NA	False	NA	NA	False	NA	NA	NA	128660222	128693659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ENSMUST00000143398.3-0	chr2	+	4622	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	0	-2522	0	0	multi-exon	FALSE	canonical	1	36	junction_11	26.3253621315648	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	False	NA	9	True	AATAAA	-20	NA	128660222	128696181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ENSMUST00000143400.8	chr15	-	2226	4	FSM	ENSMUSG00000048175.14	ENSMUST00000143400.8	2226	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.485472069779	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCACTTCCAGTTTCT	NA	False	NA	0	True	AATAAA	-21	NA	98063506	98032517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98063351
ENSMUST00000143408.3	chr7	+	1380	2	FSM	ENSMUSG00000051451.7	ENSMUST00000143408.3	1380	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	NA	False	NA	NA	False	AATAAA	-22	NA	90092885	90095312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_90093586_90094632
ENSMUST00000143412.8	chr5	+	3330	15	FSM	ENSMUSG00000029267.18	ENSMUST00000143412.8	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	498.553709263514	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTAGCTCTTCATTTT	NA	False	NA	104	True	AGTAAA	-14	NA	108213607	108256136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108213832_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUST00000143418.2	chr11	-	681	2	FSM	ENSMUSG00000020460.16	ENSMUST00000143418.2	681	2	0	0	0	0	multi-exon	FALSE	canonical	3	7569	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTGAAAGTAAAATAT	NA	False	NA	NA	False	AATAAA	-7	NA	29497891	29497115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29497746_29497840
ENSMUST00000143438.8	chr10	-	2403	4	FSM	ENSMUSG00000004667.19	ENSMUST00000143438.8	2403	4	0	0	0	0	multi-exon	FALSE	canonical	3	2552	junction_2	187.276978474843	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5600	False	NA	-19	True	ATTAAA	-19	NA	79875544	79871782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79872136_79872360_79872433_79872597_79874448_79875416
ENSMUST00000143441.2	chr8	+	1062	5	FSM	ENSMUSG00000031807.11	ENSMUST00000143441.2	1062	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	254.639941878724	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTCTGTGGTTCTT	NA	False	NA	15	True	ATTAAA	-15	NA	72044934	72048913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72045433_72046727_72046836_72047312_72047415_72047704_72047846_72048700
ENSMUST00000143445.2	chr8	+	2416	6	FSM	ENSMUSG00000054823.18	ENSMUST00000143445.2	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	11.4960862905599	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTGCCTGCTGATT	9720	False	NA	NA	False	ATTAAA	-13	NA	26092334	26153615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756
ENSMUST00000143467.8	chr19	-	817	6	FSM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	97	106	0	0	multi-exon	FALSE	canonical	3	35	junction_3	10.1390334845093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCATGGCAGTATTC	NA	False	NA	-105	True	AATAAA	-15	NA	29339273	29326104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29339196
ENSMUST00000143472.8	chr14	+	4613	21	FSM	ENSMUSG00000021893.15	ENSMUST00000143472.8	4613	21	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_12	56.4505092979683	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTTTAATGTCCAGAA	NA	False	NA	17	True	AATAAA	-22	NA	31058631	31093943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31083203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ENSMUST00000143495.8	chr5	-	1285	7	FSM	ENSMUSG00000029713.16	ENSMUST00000143495.8	1285	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	274.103032128837	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTAGTCTCCTTGCTT	1811	False	NA	-9	True	CATAAA	-18	NA	137531493	137526392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137531400
ENSMUST00000143496.8	chr1	-	3333	3	FSM	ENSMUSG00000032997.17	ENSMUST00000143496.8	3333	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGTGGAAACTG	NA	False	NA	NA	False	AATAAA	-13	NA	75455390	75451219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75452871_75453203_75453384_75453888
ENSMUST00000143503.2	chr4	+	579	3	FSM	ENSMUSG00000029066.13	ENSMUST00000143503.2	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_2	81	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAGATTGTATAAATAAA	NA	False	NA	-15	True	NA	NA	NA	155888215	155893251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155888401_155891364_155891443_155892935
ENSMUST00000143505.2	chr5	+	1557	3	FSM	ENSMUSG00000033209.18	ENSMUST00000143505.2	1557	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTCTGTGGATTTCT	NA	False	NA	NA	False	NA	NA	NA	111027687	111062182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_111027855_111040697_111040977_111061071
ENSMUST00000143513.2	chr1	+	1118	6	FSM	ENSMUSG00000026349.15	ENSMUST00000143513.2	1118	6	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_5	41.2863173460651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTCCTGCTTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	127701900	127726138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577
ENSMUST00000143514.3	chr3	-	2986	9	FSM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	0	-1643	0	0	multi-exon	FALSE	canonical	3	20	junction_5	63.3733974156349	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489932	84403399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489720
ENSMUST00000143517.8	chr10	+	2405	11	FSM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_7	154.06131896099	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGACTTTTTGTGTGTG	1100	False	NA	NA	False	NA	NA	NA	80941748	80960531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUST00000143517.8-0	chr10	+	1534	11	FSM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	57	814	0	0	multi-exon	FALSE	canonical	3	212	junction_7	154.06131896099	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1157	False	NA	13	True	NA	NA	NA	80941805	80959717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUST00000143528.8	chr8	+	852	6	FSM	ENSMUSG00000003573.16	ENSMUST00000143528.8	852	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	15.4324333790883	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTCCCAGGGAAACTTC	NA	False	NA	NA	False	NA	NA	NA	70738580	70744388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166
ENSMUST00000143537.9	chr16	+	2335	7	FSM	ENSMUSG00000005982.15	ENSMUST00000143537.9	1279	7	-35	-1021	-11	0	multi-exon	FALSE	canonical	1	15	junction_4	55.52677032047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702511	3722634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718556_3718742_3719646_3719990_3721329
ENSMUST00000143581.2	chr7	+	645	4	FSM	ENSMUSG00000031023.6	ENSMUST00000143581.2	645	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	189.467675343315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCATCTACCAAACATC	NA	False	NA	NA	False	NA	NA	NA	109302958	109308180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109303378_109304159_109304239_109306604_109306719_109308147
ENSMUST00000143600.2	chr14	+	521	3	FSM	ENSMUSG00000021963.18	ENSMUST00000143600.2	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	2870	junction_1	123.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGACTTTGCCATTAAGC	NA	False	NA	NA	False	AATAAA	-21	NA	58035882	58039604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_58036055_58038950_58039074_58039378
ENSMUST00000143632.8	chr4	+	2417	7	FSM	ENSMUSG00000028796.18	ENSMUST00000143632.8	2417	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.4542268101065	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	False	NA	20	True	AATAAA	-21	NA	128621373	128646674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_128621664_128637148_128637255_128638794_128638925_128639582_128639698_128640893_128641036_128641825_128642078_128645292
ENSMUST00000143648.2	chr16	-	659	3	FSM	ENSMUSG00000033918.17	ENSMUST00000143648.2	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_1	115.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTCAGCAGAAGCACT	NA	False	NA	NA	False	NA	NA	NA	20116915	20111669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20112153_20116342_20116484_20116880
ENSMUST00000143659.2	chr8	+	484	2	FSM	ENSMUSG00000031700.12	ENSMUST00000143659.2	484	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCATTTTTGGCTAAAGC	NA	False	NA	NA	False	NA	NA	NA	86219237	86219936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_86219319_86219533
ENSMUST00000143689.3	chr10	-	802	3	FSM	ENSMUSG00000020069.17	ENSMUST00000143689.3	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACATGCGTAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	62853863	62852196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62852322_62853000_62853117_62853302
ENSMUST00000143697.8	chr16	+	2226	4	FSM	ENSMUSG00000022679.14	ENSMUST00000143697.8	580	4	0	-1646	0	-57	multi-exon	FALSE	canonical	3	17	junction_2	74.5311269798659	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGTATATCCCTGTATT	528	False	NA	-48	True	AATAGA	-17	NA	13758565	13766389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13758888_13762529_13762601_13764392_13764452_13764615
ENSMUST00000143698.8	chr6	-	3996	13	FSM	ENSMUSG00000030064.17	ENSMUST00000143698.8	3996	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	16.9377946878833	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTTTGTCATTTGTATC	NA	False	NA	NA	False	CATAAA	-16	NA	97289341	97264042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97265442_97269323_97269457_97272536_97273349_97274995_97275116_97277169_97277318_97279249_97279307_97282107_97282337_97283439_97283560_97283639_97283774_97284987_97285130_97285574_97285714_97287623_97287701_97288855
ENSMUST00000143699.8	chr8	-	3156	27	FSM	ENSMUSG00000070000.14	ENSMUST00000143699.8	3351	27	-38	233	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	36.8870216588966	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178348	72161296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
ENSMUST00000143729.8	chr11	-	677	5	FSM	ENSMUSG00000020706.14	ENSMUST00000143729.8	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_4	59.6049494589166	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTATTTACAATCAA	NA	False	NA	NA	False	AAAAAG	-24	NA	106146622	106145117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ENSMUST00000143791.8	chr10	-	3303	21	FSM	ENSMUSG00000014329.15	ENSMUST00000143791.8	5431	21	-142	2270	-142	0	multi-exon	FALSE	canonical	1	4	junction_1	4.36205226928793	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70995672	70760931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_70761209_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ENSMUST00000143828.2	chr17	-	1283	3	FSM	ENSMUSG00000085492.8	ENSMUST00000143828.2	781	3	-502	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	30	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905750	71895551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71895980_71897482_71897518_71904930
ENSMUST00000143829.5	chr5	+	4828	9	FSM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	103.604717556683	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATTATTAAATCTATA	NA	False	NA	-4	True	AATAAA	-15	NA	73071711	73136154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73123146_73123225_73131873_73132190_73133339
ENSMUST00000143835.8	chr7	+	818	5	FSM	ENSMUSG00000030649.19	ENSMUST00000143835.8	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	227.058775430504	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTAGGGGAGTGCCT	8370	False	NA	NA	False	NA	NA	NA	101546167	101548249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101546568_101546939_101547025_101547148_101547279_101547760_101547821_101548106
ENSMUST00000143836.8	chr12	+	1896	10	FSM	ENSMUSG00000021268.18	ENSMUST00000143836.8	1896	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	140.228473183437	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGCAGTGATGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	109506887	109538155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
ENSMUST00000143842.2	chr11	-	6871	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	22.9658131018384	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGGAGTCTGTTGTGA	637	False	NA	-3	True	AATAAA	-18	NA	102447025	102366740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ENSMUST00000143850.8	chr11	-	3666	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATCTTGTATTTTTAA	NA	False	NA	-3	True	NA	NA	NA	70910129	70898267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ENSMUST00000143850.8-0	chr11	-	1141	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	34	2491	0	0	multi-exon	FALSE	canonical	3	526	junction_4	25.493463214453	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	False	NA	-9	True	AATAAA	-20	NA	70910095	70900758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ENSMUST00000143874.8	chr2	+	3266	12	FSM	ENSMUSG00000027253.16	ENSMUST00000143874.8	3266	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	4.85151420513685	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGAACTGCCTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	91287855	91309632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865
ENSMUST00000143885.8	chr4	+	2871	6	FSM	ENSMUSG00000065999.14	ENSMUST00000143885.8	552	6	-62	-2257	0	0	multi-exon	FALSE	canonical	2	6	junction_3	37.9420610931984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_147637884_147646898_147646979_147647371_147647416_147661481_147661587_147665698_147665826_147667290
ENSMUST00000143887.2	chr11	+	757	3	FSM	ENSMUSG00000078706.5	ENSMUST00000143887.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTTGAAGTTAGGAATC	NA	False	NA	NA	False	NA	NA	NA	96152435	96155694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96152836_96154999_96155212_96155549
ENSMUST00000143933.2	chr13	-	596	4	FSM	ENSMUSG00000021377.16	ENSMUST00000143933.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_3	176.083944627429	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAGACACACATTTG	NA	False	NA	NA	False	NA	NA	NA	47259630	47254962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_47255209_47255448_47255551_47259047_47259214_47259548
ENSMUST00000143961.2	chr17	+	614	3	FSM	ENSMUSG00000068039.14	ENSMUST00000143961.2	614	3	0	0	0	0	multi-exon	FALSE	canonical	3	3521	junction_2	31.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGTGAATTTGGAGCCT	NA	False	NA	NA	False	AATAAA	-25	NA	13135325	13137266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13135517_13136684_13136771_13136929
ENSMUST00000143963.2	chr6	-	745	2	FSM	ENSMUSG00000039985.15	ENSMUST00000143963.2	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	2284	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGATGGTAGTAGTATA	NA	False	NA	NA	False	AAAACA	-20	NA	148847888	148834000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148834647_148847789
ENSMUST00000143965.8	chr17	-	890	5	FSM	ENSMUSG00000036438.15	ENSMUST00000143965.8	890	5	0	0	0	0	multi-exon	FALSE	canonical	3	6557	junction_1	362.950668135492	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGCTTTTAGGAACTG	NA	False	NA	NA	False	NA	NA	NA	87754276	87741147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87741484_87742503_87742640_87743031_87743363_87750123_87750155_87754220
ENSMUST00000143971.2	chr4	-	2549	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTCTGCCTTCCTCGG	5179	False	NA	NA	False	AATAAA	-38	NA	138858424	138829124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
ENSMUST00000143971.2-0	chr4	-	453	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	119	1977	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	67.4553350167518	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCAAGCAATGCCTTT	5298	False	NA	-20	True	AATAAA	-16	NA	138858305	138831101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
ENSMUST00000143972.2	chr8	-	3150	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAAAGATAATTAT	NA	False	NA	NA	False	NA	NA	NA	66939149	66926981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ENSMUST00000143972.2-0	chr8	-	1052	7	FSM	ENSMUSG00000025591.7	ENSMUST00000143972.2	3150	7	-24	2122	0	-2122	multi-exon	FALSE	canonical	3	118	junction_5	270.629153804406	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATGTAAGAATTTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	66939173	66929103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
ENSMUST00000143977.8	chr2	-	5464	15	FSM	ENSMUSG00000026933.18	ENSMUST00000143977.8	5464	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.6477576141347	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGGGAACTCAGACATCT	NA	False	NA	NA	False	NA	NA	NA	25856779	25818542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697
ENSMUST00000143984.2	chrX	-	2184	5	FSM	ENSMUSG00000039201.11	ENSMUST00000143984.2	2184	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	59.3738157776641	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAAAGGTCACTGTGGT	NA	False	NA	-26	True	NA	NA	NA	8042130	8020729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8040439_8040550_8041949
ENSMUST00000143987.9	chr17	-	830	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	64	803	0	0	multi-exon	FALSE	canonical	3	4006	junction_3	144.496027768297	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5516	False	NA	-11	True	AATAAA	-15	NA	66408490	66386435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ENSMUST00000143998.8	chr6	+	2180	3	FSM	ENSMUSG00000034269.13	ENSMUST00000143998.8	2180	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	21	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTGTGTGGTTTTT	7843	False	NA	NA	False	AATAAA	-16	NA	113054325	113084522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113054674_113081895_113082083_113082877
ENSMUST00000144003.8	chr7	+	2536	3	FSM	ENSMUSG00000062542.12	ENSMUST00000144003.8	2536	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTCGTTGTCTCATTA	NA	False	NA	NA	False	AGTAAA	-16	NA	107103268	107147860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_107103541_107105695_107105826_107145726
ENSMUST00000144059.2	chr4	+	1022	3	FSM	ENSMUSG00000041351.17	ENSMUST00000144059.2	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	10	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGCTGCTGTGAGCCAT	740	False	NA	NA	False	GGGGCT	-6	NA	137455521	137457013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_137455675_137455838_137455880_137456185
ENSMUST00000144060.8	chr13	-	3538	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	0	0	0	0	multi-exon	TRUE	canonical	3	331	junction_5	157.730704704606	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTGAGTCAACTATTAT	NA	False	NA	NA	False	AATAAA	-25	NA	104314977	104278656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUST00000144061.2	chr14	+	1613	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCCCAGGCTCCTG	2631	False	NA	NA	False	AATATA	-25	NA	21800615	21843370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ENSMUST00000144061.2-1	chr14	+	7037	6	FSM	ENSMUSG00000021770.12	ENSMUST00000144061.2	1613	6	0	-5424	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6.01331855134916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTTGTTATAACCCTT	2631	False	NA	14	True	AATAAA	-18	NA	21800615	21848794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21800905_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ENSMUST00000144067.8	chr15	-	761	5	FSM	ENSMUSG00000064284.13	ENSMUST00000144067.8	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	131.723906334424	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGCTCTAGGTCTGGC	8138	False	NA	NA	False	NA	NA	NA	85695845	85691444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695751
ENSMUST00000144067.8-0	chr15	-	1085	5	FSM	ENSMUSG00000064284.13	ENSMUST00000144067.8	761	5	-52	-272	0	0	multi-exon	FALSE	canonical	3	18	junction_4	131.723906334424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8086	False	NA	0	True	ATTAAA	-15	NA	85695897	85691172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695751
ENSMUST00000144076.8	chr2	+	2887	19	FSM	ENSMUSG00000027263.13	ENSMUST00000144076.8	2887	19	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_18	58.617614173199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001720	121029250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ENSMUST00000144093.8	chr2	-	2010	11	FSM	ENSMUSG00000039660.17	ENSMUST00000144093.8	2010	11	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_5	40.8044115262063	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTCTAGACCCTG	NA	False	NA	-30	True	AATAAA	-13	NA	30068471	30063484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067978_30068401
ENSMUST00000144099.8	chr4	-	5680	37	FSM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	0	6167	0	0	multi-exon	TRUE	canonical	3	146	junction_29	30.4796025702355	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ENSMUST00000144106.2	chr1	-	677	2	FSM	ENSMUSG00000026281.16	ENSMUST00000144106.2	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTGTGTAGCATCC	4883	False	NA	NA	False	NA	NA	NA	93727083	93726101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93726193_93726497
ENSMUST00000144116.2	chr16	+	3266	4	FSM	ENSMUSG00000022750.19	ENSMUST00000144116.2	3266	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	142.007824510561	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAGAGAAAAAA	NA	False	NA	NA	False	TTTAAA	-14	NA	17577526	17597070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265
ENSMUST00000144120.2	chr2	+	1238	4	FSM	ENSMUSG00000027394.14	ENSMUST00000144120.2	1238	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	11.7756811551038	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCACTGTTCAGTCCTCC	NA	False	NA	NA	False	ATTAAA	-14	NA	128917964	128931701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_128918009_128923129_128923266_128923893_128924164_128930913
ENSMUST00000144143.8	chr2	-	1079	6	FSM	ENSMUSG00000026766.17	ENSMUST00000144143.8	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_5	62.3730711124601	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGCTGACTTCATTGAC	NA	False	NA	NA	False	NA	NA	NA	50186693	50171152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
ENSMUST00000144164.9	chr11	-	3431	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGGAGACATTTGAGAGT	NA	False	NA	NA	False	NA	NA	NA	54751738	54729184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ENSMUST00000144164.9-0	chr11	-	1674	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	303	1454	0	0	multi-exon	FALSE	canonical	3	120	junction_4	23.1557228347551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGAAGTGATTTCCTGT	NA	False	NA	-2	True	AATAAA	-27	NA	54751435	54730638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ENSMUST00000144165.2	chr19	-	710	3	FSM	ENSMUSG00000056209.8	ENSMUST00000144165.2	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGTGGGCCCTCTCCA	4929	False	NA	NA	False	NA	NA	NA	45737988	45736981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45737079_45737188_45737309_45737495
ENSMUST00000144166.8	chr4	+	326	3	FSM	ENSMUSG00000085525.8	ENSMUST00000144166.8	326	3	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	93	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGCTGTTCACATT	NA	False	NA	33	True	NA	NA	NA	146206900	146215004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146207052_146209452_146209546_146214922
ENSMUST00000144177.8	chr1	+	1900	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	107	1232	0	-163	multi-exon	FALSE	canonical	0	0	junction_4	25.1132346823944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	AATAAA	-23	NA	9618279	9646963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ENSMUST00000144183.3	chr13	-	2312	4	FSM	ENSMUSG00000058331.16	ENSMUST00000144183.3	2312	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCAGTATTGTGATTAAT	NA	False	NA	NA	False	AATAAA	-21	NA	67903347	67895918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67897842_67899728_67899825_67900506_67900634_67903181
ENSMUST00000144195.3	chr9	-	1156	12	FSM	ENSMUSG00000032557.14	ENSMUST00000144195.3	1156	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	177.315239657724	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGCGAAAGCTTGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	103940197	103924848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103924886_103926488_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937421_103937507_103937592_103937639_103939990
ENSMUST00000144207.9	chr7	+	807	6	FSM	ENSMUSG00000030649.19	ENSMUST00000144207.9	3103	6	-9	2305	0	0	multi-exon	FALSE	canonical	3	304	junction_1	109.312396369305	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	7817	False	NA	25	True	AATAAA	-25	NA	101545614	101548751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101545658_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUST00000144213.2	chr5	-	801	3	FSM	ENSMUSG00000032850.17	ENSMUST00000144213.2	801	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTCCTCTGTCCAGTG	NA	False	NA	NA	False	NA	NA	NA	118380986	118374991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_118375662_118380522_118380582_118380914
ENSMUST00000144234.8	chr10	+	2309	6	FSM	ENSMUSG00000001436.16	ENSMUST00000144234.8	2309	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.968170305347	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTTGTGAGACACT	NA	False	NA	17	True	ATTAAA	-19	NA	76868517	76886266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_76868615_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUST00000144236.9	chr17	-	2017	5	FSM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	147.031246679065	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573332	87562085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568_87571794_87573262
ENSMUST00000144239.2	chr19	+	785	2	FSM	ENSMUSG00000024949.18	ENSMUST00000144239.2	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	1194	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGACCCAGGTGAGTA	1970	False	NA	NA	False	GGGGCT	-3	NA	6420741	6421724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6421450_6421647
ENSMUST00000144251.8	chr9	-	3589	17	FSM	ENSMUSG00000048537.17	ENSMUST00000144251.8	3589	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	11.9085053638146	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44624537	44597604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690_44619820_44622219_44622358_44622444_44622586_44622937_44623220_44624469
ENSMUST00000144258.8	chr8	-	2995	22	FSM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_21	57.6705790816251	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGCCTCTGTGTGCA	NA	False	NA	-18	True	TTTAAA	-33	NA	84420689	84396719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
ENSMUST00000144265.6	chr5	+	531	3	FSM	ENSMUSG00000003161.16	ENSMUST00000144265.6	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_2	21	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGCTAAGTGCTAACA	NA	False	NA	NA	False	NA	NA	NA	8106561	8109721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8106640_8107537_8107622_8109352
ENSMUST00000144270.8	chr5	+	5241	21	FSM	ENSMUSG00000005672.13	ENSMUST00000144270.8	5241	21	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_9	132.566766197264	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	727	False	NA	14	True	NA	NA	NA	75735575	75817382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ENSMUST00000144285.2	chr17	-	553	3	FSM	ENSMUSG00000040048.15	ENSMUST00000144285.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	2001	junction_1	144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTCTGGTGACTAAA	1360	False	NA	NA	False	AATAAA	-22	NA	24941880	24941033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24941195_24941354_24941495_24941628
ENSMUST00000144286.2	chr19	-	545	2	FSM	ENSMUSG00000025199.17	ENSMUST00000144286.2	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATTATTAGTGAAGGTA	2040	False	NA	NA	False	AAGAAA	-30	NA	44067721	44066728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44066880_44067327
ENSMUST00000144295.2	chr7	-	1150	2	FSM	ENSMUSG00000030538.16	ENSMUST00000144295.2	1150	2	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGCAGTCCTGGGCAAG	2133	False	NA	NA	False	NA	NA	NA	79882479	79881198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79882127_79882257
ENSMUST00000144306.9	chr11	+	985	5	FSM	ENSMUSG00000078656.12	ENSMUST00000144306.9	361	5	5	-629	0	0	multi-exon	FALSE	canonical	3	19	junction_3	527.253733983933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTGTTACTACT	NA	False	NA	16	True	ATTAAA	-13	NA	101144560	101150371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101147703_101147780_101149735
ENSMUST00000144326.4	chr13	-	3371	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_12	22.7983182188833	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTCAGTTGAATTT	NA	False	NA	-1	True	ATTAAA	-17	NA	43634758	43556150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUST00000144337.2	chr6	-	433	2	FSM	ENSMUSG00000079523.9	ENSMUST00000144337.2	433	2	0	0	0	0	multi-exon	FALSE	canonical	3	27215	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCATTGAACAGGAAAAGA	NA	False	NA	NA	False	GGGGCT	-37	NA	72935382	72934637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72935008_72935319
ENSMUST00000144338.2	chr10	-	2290	3	FSM	ENSMUSG00000004359.17	ENSMUST00000144338.2	2290	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAGAAAGAACAATC	NA	False	NA	NA	False	NA	NA	NA	88518885	88513672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88515818_88516340_88516437_88518836
ENSMUST00000144347.2	chr4	+	387	2	FSM	ENSMUSG00000084987.2	ENSMUST00000144347.2	387	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAAGATTTATCCCCTGG	2926	False	NA	NA	False	NA	NA	NA	154685653	154688659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154685865_154688483
ENSMUST00000144347.2-0	chr4	+	2239	2	FSM	ENSMUSG00000084987.2	ENSMUST00000144347.2	387	2	118	-1970	0	1970	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTTCCTGTGTGTCT	3044	False	NA	NA	False	NA	NA	NA	154685771	154690629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154685865_154688483
ENSMUST00000144349.2	chr4	-	1003	2	FSM	ENSMUSG00000028484.17	ENSMUST00000144349.2	1003	2	0	0	0	0	multi-exon	FALSE	canonical	3	1822	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCTGGATTATGGCC	6721	False	NA	NA	False	TTTAAA	-7	NA	83383280	83381066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_83381951_83383161
ENSMUST00000144356.8	chrX	+	1753	2	FSM	ENSMUSG00000008035.13	ENSMUST00000144356.8	447	2	0	-1306	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGGACAAGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	10581257	10585929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_10581307_10584225
ENSMUST00000144366.8	chrX	-	709	6	FSM	ENSMUSG00000087174.8	ENSMUST00000144366.8	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	33.8904116233486	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTGGATTTACATGTA	NA	False	NA	-3	True	AATAAA	-17	NA	104113661	104087408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112176_104112235_104113216_104113282_104113605
ENSMUST00000144378.2	chr5	-	3842	3	FSM	ENSMUSG00000029655.18	ENSMUST00000144378.2	3842	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAAAATTTATTTTT	5472	False	NA	NA	False	NA	NA	NA	150589042	150571674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_150574205_150584743_150585979_150588965
ENSMUST00000144386.8	chr1	-	3179	13	FSM	ENSMUSG00000070643.12	ENSMUST00000144386.8	3179	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	29.0271663944121	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133320956	133310040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133311663_133312150_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810
ENSMUST00000144428.2	chrX	-	1551	1	FSM	ENSMUSG00000052157.5	ENSMUST00000144428.2	1551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTGTAGAATGGTTTA	NA	False	NA	NA	False	AAGAAA	-5	NA	154088745	154087194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_154087200_154088700
ENSMUST00000144429.8	chrX	-	8233	47	FSM	ENSMUSG00000031328.17	ENSMUST00000144429.8	8233	47	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_38	150.050968026438	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTTTCATGGAAGGAG	NA	False	NA	-3	True	AATAAA	-25	NA	73290004	73267066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276572_73276597_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283933_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUST00000144441.8	chr11	-	913	4	FSM	ENSMUSG00000042363.15	ENSMUST00000144441.8	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	21.6384431561566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGATCGATCAGGTGCC	NA	False	NA	NA	False	TTTAAA	-15	NA	20780755	20776349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275
ENSMUST00000144445.2	chr6	-	531	2	FSM	ENSMUSG00000030316.14	ENSMUST00000144445.2	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGAGAAGCAGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	115009226	115008238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115008724_115009180
ENSMUST00000144458.8	chr8	+	3726	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_3	215.032734538435	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAAGCTGTGTTTCTTGGT	8373	False	NA	34	True	AATAAA	-16	NA	120637098	120684294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUST00000144466.2	chr8	+	463	2	FSM	ENSMUSG00000003824.13	ENSMUST00000144466.2	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGGAAAGACTACAAGAAT	NA	False	NA	NA	False	NA	NA	NA	85599066	85612631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85599462_85612563
ENSMUST00000144471.8	chr18	-	1811	6	FSM	ENSMUSG00000024454.17	ENSMUST00000144471.8	1811	6	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_2	48.6514131346665	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38077128	38070024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_38070737_38074005_38074164_38074431_38074820_38074930_38075021_38076508_38076574_38076730
ENSMUST00000144489.8	chr4	+	2911	10	FSM	ENSMUSG00000059810.19	ENSMUST00000144489.8	2911	10	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_5	9.18936583472681	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTATTCCTGGT	9287	False	NA	1	True	AATAAA	-21	NA	62552614	62621255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ENSMUST00000144511.2	chr11	+	692	2	FSM	ENSMUSG00000000142.16	ENSMUST00000144511.2	692	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGATTCCCCTTTGAC	NA	False	NA	NA	False	AATGAA	-31	NA	108812473	108814320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_108812823_108813977
ENSMUST00000144516.9	chr17	-	1186	6	FSM	ENSMUSG00000024006.18	ENSMUST00000144516.9	1186	6	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_3	57.6090270704167	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTACAAAGCAAATGTAA	NA	False	NA	NA	False	AATAGA	-24	NA	29226827	29202523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ENSMUST00000144525.2	chr8	-	416	2	FSM	ENSMUSG00000050914.17	ENSMUST00000144525.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATATTTTGGATGTGCAT	NA	False	NA	NA	False	AATACA	-16	NA	46450905	46450001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_46450163_46450650
ENSMUST00000144531.2	chr11	+	671	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_1	166	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286472	69287506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69286799_69287002_69287187_69287345
ENSMUST00000144531.2-0	chr11	+	504	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	167	0	0	0	multi-exon	FALSE	canonical	3	948	junction_1	166	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTCTGTGTGTAGGT	NA	False	NA	17	True	ATTAAA	-17	NA	69286639	69287506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69286799_69287002_69287187_69287345
ENSMUST00000144538.2	chr7	+	1490	3	FSM	ENSMUSG00000072244.12	ENSMUST00000144538.2	1490	3	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_1	31	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103867999	103876940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_103868091_103874713_103875188_103876015
ENSMUST00000144576.8	chr1	-	822	7	FSM	ENSMUSG00000062963.11	ENSMUST00000144576.8	822	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	228.930423685645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGGCGGTTTGTATCC	7366	False	NA	NA	False	AATGAA	-32	NA	171122514	171116266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117427_171117521_171117721_171117790_171122206_171122401_171122493
ENSMUST00000144578.2	chr7	+	2253	4	FSM	ENSMUSG00000060397.7	ENSMUST00000144578.2	3834	4	0	1581	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.55902608401044	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTGTTGTGTGTAATTT	NA	False	NA	NA	False	AATAAA	-36	NA	12615103	12625768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922
ENSMUST00000144585.9	chr15	-	6165	41	FSM	ENSMUSG00000036529.18	ENSMUST00000144585.9	6165	41	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_22	71.0688002923927	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199458	89172485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ENSMUST00000144588.2	chr6	-	769	2	FSM	ENSMUSG00000057666.19	ENSMUST00000144588.2	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	8124	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTCTCTGAAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	125142568	125141559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_125142275_125142514
ENSMUST00000144590.9	chr2	-	3497	27	FSM	ENSMUSG00000027185.16	ENSMUST00000144590.9	3497	27	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_23	29.3101149816354	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGAGGGCCTGGTGTCC	NA	False	NA	NA	False	NA	NA	NA	103591549	103554536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ENSMUST00000144599.2	chr13	-	1885	4	FSM	ENSMUSG00000025453.19	ENSMUST00000144599.2	1885	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	27.3536509852382	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATTCGTTGAGACTTT	NA	False	NA	NA	False	AATAAA	-14	NA	119545533	119530007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_119531365_119533282_119533513_119541087_119541291_119545438
ENSMUST00000144647.8	chr10	+	1758	6	FSM	ENSMUSG00000113262.2	ENSMUST00000144647.8	1758	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	364.148541120241	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCATGACCTTTTTGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	81220299	81227394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81226192_81226419_81226622
ENSMUST00000144668.8	chr4	-	1502	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	0	1717	0	176	multi-exon	FALSE	canonical	3	54	junction_8	7.46554586081956	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCATTAGCTATATGCC	NA	False	NA	-24	True	AATACA	-20	NA	133728201	133698055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ENSMUST00000144683.2	chr2	-	783	2	FSM	ENSMUSG00000005510.10	ENSMUST00000144683.2	783	2	0	0	0	0	multi-exon	FALSE	canonical	3	1877	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACATCTATTACACAAAG	NA	False	NA	NA	False	AATAGA	-18	NA	90735046	90734168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90734833_90734927
ENSMUST00000144684.8	chr2	+	636	3	FSM	ENSMUSG00000086598.10	ENSMUST00000144684.8	636	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	4	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATACAACATGTGCTCTC	NA	False	NA	NA	False	NA	NA	NA	84489422	84491810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84489938_84490440_84490526_84491774
ENSMUST00000144736.8	chr9	-	2958	16	FSM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	17.8940089291236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCTTTAGATTGGT	6987	False	NA	NA	False	AATAAA	-12	NA	54408855	54330456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ENSMUST00000144742.6	chr5	+	1466	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	0	0	0	0	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAGTAAAGTTACTGTAA	9066	False	NA	NA	False	AATGAA	-5	NA	30824120	30832174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUST00000144742.6-0	chr5	+	887	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	158	421	0	0	multi-exon	FALSE	canonical	3	1270	junction_1	201.219407612685	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9224	False	NA	40	True	AATAAA	-24	NA	30824278	30831753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUST00000144748.8	chr7	+	2286	5	FSM	ENSMUSG00000042289.12	ENSMUST00000144748.8	2286	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	5.22015325445528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1884	False	NA	14	True	AATAAA	-15	NA	127399775	127402974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401286_127401407
ENSMUST00000144766.2	chr8	+	1551	5	FSM	ENSMUSG00000019428.17	ENSMUST00000144766.2	1551	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	508.381008693283	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTATCCATAGCTGCTCC	NA	False	NA	NA	False	NA	NA	NA	70980411	70985103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171
ENSMUST00000144777.8	chr3	-	1332	4	FSM	ENSMUSG00000027953.14	ENSMUST00000144777.8	1332	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	10.1434160364686	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCAGAGTGATGTGTT	NA	False	NA	-33	True	AATAAA	-15	NA	89177832	89175554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133
ENSMUST00000144779.2	chr7	-	2351	10	FSM	ENSMUSG00000030872.15	ENSMUST00000144779.2	2351	10	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_7	23.1362043260619	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	-5	True	AATAAA	-14	NA	121601714	121587987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297
ENSMUST00000144796.2	chr7	+	1778	2	FSM	ENSMUSG00000086502.2	ENSMUST00000144796.2	1778	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGGGTGCCAAGTA	903	False	NA	NA	False	NA	NA	NA	127047811	127059532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127048744_127058686
ENSMUST00000144799.2	chr16	-	514	2	FSM	ENSMUSG00000022890.14	ENSMUST00000144799.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	6096	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84625701	84624758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84624884_84625312
ENSMUST00000144807.2	chr8	+	2519	2	FSM	ENSMUSG00000052446.18	ENSMUST00000144807.2	701	2	-3	-1815	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704920	72724177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72705005_72721742
ENSMUST00000144813.2	chr4	-	742	5	FSM	ENSMUSG00000028923.15	ENSMUST00000144813.2	742	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	22.9891278651453	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAAGTTGAGCGGAG	8485	False	NA	NA	False	NA	NA	NA	140805668	140799639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUST00000144843.8	chr5	+	4833	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	22.378925946761	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATCTTCCAAGTGTTT	NA	False	NA	14	True	AATAAA	-33	NA	73071646	73136172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ENSMUST00000144852.2	chr11	-	4720	4	FSM	ENSMUSG00000056579.19	ENSMUST00000144852.2	4720	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1146.47556547108	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTTGGGTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	3598812	3589793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3593180_3594771_3595524_3596556_3597079_3598752
ENSMUST00000144877.3	chr16	-	1128	2	FSM	ENSMUSG00000058240.15	ENSMUST00000144877.3	1128	2	0	0	0	0	multi-exon	FALSE	canonical	3	1721	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAATTCTCTTTTTTCTC	NA	False	NA	NA	False	AATAAA	-18	NA	91496176	91491231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91492248_91496064
ENSMUST00000144897.2	chr7	-	1903	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	39	1210	0	0	multi-exon	FALSE	canonical	3	82	junction_4	7.98498591107085	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAAAGTTCTAGCCG	5026	False	NA	NA	False	NA	NA	NA	126294917	126289849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
ENSMUST00000144903.2	chr11	+	834	2	FSM	ENSMUSG00000020287.16	ENSMUST00000144903.2	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTCAGTACAGGCCCAA	NA	False	NA	NA	False	NA	NA	NA	32176529	32178397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_32176718_32177751
ENSMUST00000144905.3	chr7	+	1966	1	FSM	ENSMUSG00000045411.17	ENSMUST00000144905.3	1966	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATACTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	43896210	43898176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896200_43898200
ENSMUST00000144909.8	chr7	-	2581	14	FSM	ENSMUSG00000054808.16	ENSMUST00000144909.8	2581	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	384.584798783859	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGGAAAAA	NA	False	NA	NA	False	AAAACA	-37	NA	28606810	28593077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28606722
ENSMUST00000144918.2	chr10	+	948	2	FSM	ENSMUSG00000025393.13	ENSMUST00000144918.2	948	2	0	0	0	0	multi-exon	FALSE	canonical	3	10302	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTCTTGTCTCAGCCAT	NA	False	NA	NA	False	GATAAA	-30	NA	127923549	127924920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127924403_127924825
ENSMUST00000144924.8	chr2	+	1965	12	FSM	ENSMUSG00000027115.15	ENSMUST00000144924.8	1965	12	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_6	27.0380815007217	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAGACAATGTGAGGGA	1490	False	NA	NA	False	AATACA	-13	NA	109111196	109141179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891
ENSMUST00000144936.8	chr15	-	3639	7	FSM	ENSMUSG00000079020.10	ENSMUST00000144936.8	3639	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	109.922700112397	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACGCTGTGTTTATGTCC	9997	False	NA	-3	True	AATAAA	-27	NA	73477316	73452138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459369_73459574_73461234_73461424_73477290
ENSMUST00000144942.2	chr11	-	3177	18	FSM	ENSMUSG00000020538.16	ENSMUST00000144942.2	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_17	64.3975541670564	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGAGGAGGAGGGCAGG	5243	False	NA	NA	False	NA	NA	NA	60101291	60091288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
ENSMUST00000144950.8	chr3	-	2459	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	4.18993502999218	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTATAGTCTTTTTAATA	NA	False	NA	NA	False	NA	NA	NA	151915720	151889618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
ENSMUST00000144962.8	chr3	+	1497	4	FSM	ENSMUSG00000028102.16	ENSMUST00000144962.8	2235	4	98	640	-26	0	multi-exon	FALSE	canonical	3	9	junction_1	127.753234357839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542789	96552042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96542817_96543989_96544106_96544446_96544649_96550890
ENSMUST00000144964.8	chr17	+	3383	16	FSM	ENSMUSG00000002763.17	ENSMUST00000144964.8	3383	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	12.537942414926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTGAGAGGTTGC	NA	False	NA	11	True	AATAAA	-18	NA	47022388	47036467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ENSMUST00000144992.2	chr4	-	551	2	FSM	ENSMUSG00000028639.15	ENSMUST00000144992.2	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	10469	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGGAAGGAAAGCTACAT	NA	False	NA	NA	False	TATAAA	-43	NA	119139383	119138339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119138850_119139342
ENSMUST00000145003.8	chr12	+	1424	10	FSM	ENSMUSG00000047022.19	ENSMUST00000145003.8	1424	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	13.9602610609146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGGAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57277231	57504018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738
ENSMUST00000145054.8	chr6	+	558	3	FSM	ENSMUSG00000030264.15	ENSMUST00000145054.8	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	91.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCATGTGATTACAGTA	NA	False	NA	NA	False	AATATA	-8	NA	113023287	113026503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113023352_113024375_113024666_113026299
ENSMUST00000145065.2	chrX	+	5407	6	FSM	ENSMUSG00000025860.16	ENSMUST00000145065.2	5407	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	43.8880393729317	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTATCTTCTTTGTAT	NA	False	NA	18	True	AATAAA	-14	NA	41157631	41198533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_41157750_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ENSMUST00000145098.2	chr7	-	3054	4	FSM	ENSMUSG00000050855.17	ENSMUST00000145098.2	3712	4	-28	686	0	0	multi-exon	FALSE	canonical	3	25	junction_3	12.2836838484589	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3423	False	NA	-4	True	AATAAA	-21	NA	29553094	29543360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29545674_29545893_29546386_29550366_29550443_29552921
ENSMUST00000145114.8	chr7	+	1116	6	FSM	ENSMUSG00000063179.14	ENSMUST00000145114.8	1116	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	77.0516709747427	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCTGATTTGGATAAA	NA	False	NA	19	True	ATTAAA	-19	NA	130972874	130989565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986239_130986323_130989346
ENSMUST00000145116.8	chr18	+	968	3	FSM	ENSMUSG00000024571.16	ENSMUST00000145116.8	968	3	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_2	916.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTCCTGTACGAGACT	NA	False	NA	NA	False	TTTAAA	-12	NA	80250044	80253982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80250117_80250368_80250559_80253276
ENSMUST00000145118.8	chr12	-	4427	19	FSM	ENSMUSG00000052593.17	ENSMUST00000145118.8	4427	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	37.6614630951738	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATGATACGAGCCA	NA	False	NA	NA	False	AATAAA	-36	NA	21423594	21373517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379157_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUST00000145152.8	chr5	-	2588	4	FSM	ENSMUSG00000029433.17	ENSMUST00000145152.8	2588	4	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_1	60.8659729788875	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACAGACTAAAGGTTT	8962	False	NA	NA	False	NA	NA	NA	123662199	123653865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUST00000145157.2	chr15	+	681	4	FSM	ENSMUSG00000033099.11	ENSMUST00000145157.2	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	225.473329292451	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGGCTAGTGACAGCGAA	NA	False	NA	NA	False	NA	NA	NA	78819385	78822024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78819895_78820678_78820785_78821333_78821383_78822007
ENSMUST00000145159.8	chrX	-	3208	21	FSM	ENSMUSG00000031389.18	ENSMUST00000145159.8	3208	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	9.50513019374274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTTGTAATAGCCTGTG	NA	False	NA	NA	False	CATAAA	-17	NA	72954877	72938137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72938570_72939553_72939654_72939999_72940093_72940419_72940604_72940686_72940761_72940834_72941069_72941158_72941265_72941359_72941495_72941574_72941653_72941737_72941799_72943146_72943250_72943450_72943479_72943704_72944076_72944240_72944343_72947853_72948076_72948185_72948315_72949256_72949470_72949762_72949826_72950034_72950198_72950274_72950483_72954768
ENSMUST00000145164.8	chr11	+	789	3	FSM	ENSMUSG00000082286.12	ENSMUST00000145164.8	789	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	25.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGATCCTCACCTTTGG	NA	False	NA	NA	False	NA	NA	NA	3075903	3079396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_3076059_3077478_3077645_3078928
ENSMUST00000145167.9	chr5	+	6803	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGTTTTCAAGTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	30437578	30477425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ENSMUST00000145167.9-0	chr5	+	3283	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	66	3454	0	0	multi-exon	FALSE	canonical	3	44	junction_3	10.5725010181025	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTTGTCACTGTTGA	NA	False	NA	3	True	AGTAAA	-14	NA	30437644	30473971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ENSMUST00000145173.2	chr11	-	423	4	FSM	ENSMUSG00000003585.14	ENSMUST00000145173.2	423	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	8.25967446224258	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCGGCCCTCTGGATGC	NA	False	NA	NA	False	NA	NA	NA	4073415	4061156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4061226_4061442_4061503_4061893_4061938_4073165
ENSMUST00000145174.8	chr5	-	2961	8	FSM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	31.3453443472057	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120833468	120818267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474
ENSMUST00000145206.2	chr11	-	1802	2	FSM	ENSMUSG00000087259.8	ENSMUST00000145206.2	1802	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGTCTTTTCTAAA	NA	False	NA	NA	False	TATAAA	-23	NA	113092648	112934720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_112935989_113092114
ENSMUST00000145209.2	chr5	+	414	1	FSM	ENSMUSG00000058905.6	ENSMUST00000145209.2	414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	857	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCACACGCCCGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	133503961	133504375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_133504000_133504400
ENSMUST00000145216.8	chr8	-	1329	4	FSM	ENSMUSG00000031604.11	ENSMUST00000145216.8	1329	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	331.816214190928	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTAGCTGCCATGTTTT	NA	False	NA	-23	True	AATAAA	-34	NA	65186615	65171242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65186541
ENSMUST00000145237.8	chr7	+	1829	4	FSM	ENSMUSG00000070828.11	ENSMUST00000145237.8	1829	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4.49691252107735	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	11131841	11136245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_11131924_11132578_11133051_11134886_11135047_11135130
ENSMUST00000145256.8	chr8	+	2777	4	FSM	ENSMUSG00000052446.18	ENSMUST00000145256.8	504	4	7	-2280	0	0	multi-exon	FALSE	canonical	3	61	junction_2	168.256418071413	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704920	72724177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72705005_72719637_72719835_72719943_72720005_72721742
ENSMUST00000145259.8	chr15	+	3255	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTGATCCTCTGGCT	NA	False	NA	6	True	AATAAA	-16	NA	89239965	89257029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000145259.8-0	chr15	+	1992	20	FSM	ENSMUSG00000008690.16	ENSMUST00000145259.8	3255	20	0	1263	0	0	multi-exon	FALSE	canonical	0	0	junction_1	269.960005245468	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGCTACCCCACCT	NA	False	NA	-2	True	NA	NA	NA	89239965	89255766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUST00000145260.2	chr17	-	2459	4	FSM	ENSMUSG00000024459.19	ENSMUST00000145260.2	2459	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	46.3680924774785	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGAGTTTTTAATACG	NA	False	NA	NA	False	CATAAA	-14	NA	37300429	37294952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396
ENSMUST00000145262.2	chr11	+	642	2	FSM	ENSMUSG00000085860.2	ENSMUST00000145262.2	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTTTGGCTACATATA	NA	False	NA	NA	False	NA	NA	NA	97505807	97509857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97505855_97509262
ENSMUST00000145265.2	chr11	-	3001	5	FSM	ENSMUSG00000020946.14	ENSMUST00000145265.2	917	5	0	-2084	0	0	multi-exon	FALSE	canonical	3	13	junction_4	142.958910180513	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	False	NA	2	True	AATAAA	-31	NA	103588524	103567674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103588455
ENSMUST00000145275.8	chr10	-	3065	20	FSM	ENSMUSG00000040354.15	ENSMUST00000145275.8	3065	20	0	0	0	0	multi-exon	FALSE	canonical	3	1393	junction_14	176.876657025606	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGAGCCCTCTCCTGGTCT	NA	False	NA	-11	True	AATAAA	-22	NA	127147547	127132094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127132310_127132409_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUST00000145276.8	chr17	+	810	6	FSM	ENSMUSG00000073468.13	ENSMUST00000145276.8	810	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	242.374586126516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTCTGGATCAACTG	2990	False	NA	NA	False	AATAAA	-17	NA	8530000	8546272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8530118_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ENSMUST00000145289.2	chr11	-	453	3	FSM	ENSMUSG00000059796.17	ENSMUST00000145289.2	453	3	0	0	0	0	multi-exon	FALSE	canonical	3	13166	junction_2	691	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGGACTGGGAAAACAG	NA	False	NA	NA	False	NA	NA	NA	69562048	69561073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69561099_69561440_69561574_69561753
ENSMUST00000145327.2	chr2	+	611	2	FSM	ENSMUSG00000039849.7	ENSMUST00000145327.2	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCACGCAAAGAAAATCT	5896	False	NA	44	True	NA	NA	NA	164721223	164725119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164721410_164724694
ENSMUST00000145331.8	chr11	-	1843	10	FSM	ENSMUSG00000018362.15	ENSMUST00000145331.8	1843	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1279.26507644134	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9767	False	NA	NA	False	AATAAA	-27	NA	106890266	106879454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106887334_106887473_106888063_106888141_106890184
ENSMUST00000145347.8	chr17	-	5463	12	FSM	ENSMUSG00000052105.18	ENSMUST00000145347.8	5463	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	72.8864167871224	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAGGGTCTTGGTGTCA	1159	False	NA	-19	True	AATAAA	-15	NA	66692905	66643982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66691294_66691370_66692854
ENSMUST00000145350.2	chr4	-	1659	9	FSM	ENSMUSG00000028670.15	ENSMUST00000145350.2	1119	9	0	-540	0	0	multi-exon	FALSE	canonical	3	407	junction_1	24.7474746186353	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCCCTTATGTGGTACA	NA	False	NA	-11	True	ATTAAA	-20	NA	135699899	135695534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135696379_135696454_135696629_135696738_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ENSMUST00000145353.8	chr11	-	5736	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_7	45.9026998251701	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603550	49562329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ENSMUST00000145353.8-0	chr11	-	3736	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	0	2000	0	1195	multi-exon	FALSE	canonical	3	61	junction_7	45.9026998251701	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGAATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	49603550	49564329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ENSMUST00000145364.8	chr4	+	2151	6	FSM	ENSMUSG00000037266.19	ENSMUST00000145364.8	2151	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	379.006385170488	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650955	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134653336_134654130_134654241
ENSMUST00000145417.2	chr18	+	875	1	FSM	ENSMUSG00000085939.4	ENSMUST00000145417.2	875	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1024	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACCAAAGCAAACGAAAAT	NA	False	NA	NA	False	ATTAAA	-34	NA	50267792	50268667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_50267800_50268700
ENSMUST00000145451.8	chr13	-	4989	5	FSM	ENSMUSG00000046351.12	ENSMUST00000145451.8	1261	5	201	-3929	0	0	multi-exon	FALSE	canonical	3	23	junction_4	37.5499667110372	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTCCACTATACTA	9214	False	NA	0	True	AATAAA	-22	NA	23553170	23537272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_23541884_23546749_23546825_23546972_23547046_23552289_23552376_23553026
ENSMUST00000145452.2	chr10	-	530	2	FSM	ENSMUSG00000034932.5	ENSMUST00000145452.2	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGGGTTGGTCAACAG	3104	False	NA	NA	False	NA	NA	NA	81102758	81101263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81101642_81102606
ENSMUST00000145457.2	chr16	-	2272	4	FSM	ENSMUSG00000037965.16	ENSMUST00000145457.2	2272	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	8.28653526310404	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7071	False	NA	NA	False	NA	NA	NA	10976627	10972046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10974165_10974391_10974426_10976417_10976457_10976546
ENSMUST00000145484.2	chr11	-	3102	7	FSM	ENSMUSG00000059995.13	ENSMUST00000145484.2	3102	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	60.3103086821261	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGCCTGCCCACTCTCA	1007	False	NA	-6	True	AATAAA	-19	NA	102184270	102180125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102182630_102182723_102182882_102182961_102183034_102183267_102183312_102183530_102183600_102183892_102183979_102184101
ENSMUST00000145532.9	chr11	-	1415	8	FSM	ENSMUSG00000042709.16	ENSMUST00000145532.9	949	8	-33	-433	0	-407	multi-exon	FALSE	canonical	3	57	junction_4	104.174892192242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATCAAGCCTCATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	60307877	60291870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296704_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUST00000145588.2	chr11	+	987	3	FSM	ENSMUSG00000020484.20	ENSMUST00000145588.2	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_2	32	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGGTGGACAGCAAGCC	NA	False	NA	NA	False	NA	NA	NA	5471004	5474026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_5471201_5471922_5472020_5473332
ENSMUST00000145600.2	chr19	+	5613	36	FSM	ENSMUSG00000024773.16	ENSMUST00000145600.2	5613	36	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_22	23.3502174092925	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCCACGTCCAGGTC	1058	False	NA	15	True	AATAAA	-15	NA	6295494	6312325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305302_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ENSMUST00000145607.2	chr2	-	831	2	FSM	ENSMUSG00000036752.5	ENSMUST00000145607.2	831	2	0	0	0	0	multi-exon	FALSE	canonical	3	1369	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAAAGCTTGTGCCATT	NA	False	NA	NA	False	NA	NA	NA	25114666	25113534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25114245_25114545
ENSMUST00000145614.2	chr2	+	977	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	0	3301	0	0	multi-exon	FALSE	canonical	3	506	junction_2	32.273139846559	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCCCATTTACTGGCT	385	False	NA	14	True	NA	NA	NA	130405661	130407314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
ENSMUST00000145664.9	chr4	-	8187	20	FSM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_19	32.8919156684966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGAAGCTTTTTTT	NA	False	NA	-5	True	AATAAA	-21	NA	133480922	133406318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ENSMUST00000145665.8	chr10	-	2869	12	FSM	ENSMUSG00000020227.11	ENSMUST00000145665.8	2869	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	6.09565622336008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTACAGCACTGTTGTT	NA	False	NA	NA	False	TATAAA	-14	NA	120038035	119977569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037913
ENSMUST00000145670.2	chr10	+	468	2	FSM	ENSMUSG00000006728.13	ENSMUST00000145670.2	468	2	0	0	0	0	multi-exon	FALSE	canonical	3	5878	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATACTGGGATCTTT	NA	False	NA	23	True	ACTAAA	-30	NA	126901944	126903104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126902106_126902797
ENSMUST00000145682.2	chr4	+	560	3	FSM	ENSMUSG00000037692.15	ENSMUST00000145682.2	560	3	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCCAGGTGACCGGGGGA	1248	False	NA	NA	False	NA	NA	NA	132738875	132782394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132739270_132739503_132739599_132782323
ENSMUST00000145692.8	chr2	+	3249	22	FSM	ENSMUSG00000027655.15	ENSMUST00000145692.8	3249	22	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	22.9958095364314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTCTCCTGTCTGTGG	NA	False	NA	28	True	AGTAAA	-19	NA	158636781	158700134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657329_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ENSMUST00000145693.8	chr14	-	3352	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	32.5451609306207	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9922	False	NA	-4	True	AATAAA	-13	NA	103336435	103318469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ENSMUST00000145695.2	chr8	-	2000	4	FSM	ENSMUSG00000050052.13	ENSMUST00000145695.2	373	4	0	-1627	0	-356	multi-exon	FALSE	canonical	3	28	junction_3	120.875509880575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAAATTATGGAGATT	4525	False	NA	-6	True	AATAAA	-20	NA	14025032	14002485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_14004136_14005719_14005818_14024540_14024730_14024969
ENSMUST00000145696.4	chr6	-	420	3	FSM	ENSMUSG00000032757.7	ENSMUST00000145696.4	420	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	197.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAATGAGAGTTCTCT	7	True	NA	NA	False	NA	NA	NA	4086930	4081494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_4081636_4082457_4082583_4086776
ENSMUST00000145698.8	chr2	+	6649	16	FSM	ENSMUSG00000026883.18	ENSMUST00000145698.8	6649	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	77.7277299295432	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGACTTGCCTTTCTT	8466	False	NA	9	True	ATTAAA	-19	NA	35511992	35621004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_35512296_35533899_35534137_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ENSMUST00000145701.8	chr2	-	4147	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCATGGTGACTCTTACT	986	False	NA	NA	False	ATTAAA	-31	NA	26299212	26286260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ENSMUST00000145701.8-0	chr2	-	3345	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	-3	805	0	0	multi-exon	FALSE	canonical	3	30	junction_1	7.99228022593531	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	983	False	NA	3	True	AATAAA	-23	NA	26299215	26287065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ENSMUST00000145707.2	chr5	-	454	3	FSM	ENSMUSG00000035234.19	ENSMUST00000145707.2	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	27	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGCTTCTACTGCCT	NA	False	NA	NA	False	NA	NA	NA	100968813	100965618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100965865_100966382_100966474_100968696
ENSMUST00000145719.2	chr15	-	1441	8	FSM	ENSMUSG00000044224.17	ENSMUST00000145719.2	1441	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	295.324864361611	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGTGCCTTTCTGCTTC	9074	False	NA	-24	True	ATTAAA	-14	NA	10461493	10446850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454939_10460035_10460193_10461205
ENSMUST00000145720.2	chr3	-	2108	5	FSM	ENSMUSG00000027881.15	ENSMUST00000145720.2	2108	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	118.495516792831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTCACT	6867	False	NA	NA	False	AATAAA	-30	NA	108819026	108813876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108815164_108815247_108815400_108815651_108815721_108817658_108817712_108818479
ENSMUST00000145795.2	chr4	-	1014	2	FSM	ENSMUSG00000054428.13	ENSMUST00000145795.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	7869	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAACAAAAAA	9305	False	NA	NA	False	NA	NA	NA	132260906	132259798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132260699_132260792
ENSMUST00000145854.8	chr5	+	657	4	FSM	ENSMUSG00000064267.14	ENSMUST00000145854.8	657	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	20.8859335970941	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGGAGGAGGAGCCA	NA	False	NA	NA	False	NA	NA	NA	122344866	122371603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122345220_122348404_122348456_122354294_122354427_122371482
ENSMUST00000145859.4	chr2	+	560	2	FSM	ENSMUSG00000074578.15	ENSMUST00000145859.4	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTTGCAGGCTAGTG	NA	False	NA	NA	False	AATGAA	-12	NA	166905152	166906050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166905218_166905555
ENSMUST00000145881.8	chr7	-	895	2	FSM	ENSMUSG00000040139.15	ENSMUST00000145881.8	895	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGTCTGGCTTGGTGT	NA	False	NA	-7	True	ATTAAA	-14	NA	137012485	136977302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_136978081_137012368
ENSMUST00000145903.8	chr2	-	1149	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	158	1661	0	0	multi-exon	FALSE	canonical	3	258	junction_7	62.9123134503371	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2795	False	NA	-22	True	AATAAA	-17	NA	34689766	34669228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ENSMUST00000145904.2-1	chr2	+	3716	4	FSM	ENSMUSG00000037514.19_ENSMUSG00000086329.2	ENSMUST00000145904.2	558	4	-301	-2857	0	0	multi-exon	FALSE	canonical	3	31	junction_2	262.90725022757	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	864	False	NA	5	True	AATAAA	-19	NA	131104414	131141108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131104736_131115830_131116184_131135318_131135445_131138192
ENSMUST00000145910.9	chr17	-	5468	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	620	2541	620	2142	multi-exon	FALSE	canonical	3	23	junction_11	6.14755134531242	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCTATTCAAATGTGAA	NA	False	NA	NA	False	ATTAAA	-18	NA	79044005	78959882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ENSMUST00000145919.2	chr8	+	3989	12	FSM	ENSMUSG00000034518.15	ENSMUST00000145919.2	3989	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	21.8858798209528	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720306	75758606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUST00000145934.8	chr11	-	2824	9	FSM	ENSMUSG00000037907.17	ENSMUST00000145934.8	2824	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	1.58113883008419	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTCTACTTAACTTTA	NA	False	NA	1	True	AATAAA	-18	NA	77367262	77361310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_77363205_77363274_77363439_77363550_77363704_77363836_77363995_77364106_77364238_77364405_77364471_77365348_77365431_77367008_77367076_77367152
ENSMUST00000145959.8	chr7	-	2362	17	FSM	ENSMUSG00000038520.16	ENSMUST00000145959.8	2362	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	59.8690954813082	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCTGGCTGGCATCAGG	7699	False	NA	-10	True	AATAAA	-15	NA	44498503	44490455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491609_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ENSMUST00000145963.9	chr18	+	698	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	51	3329	-17	188	multi-exon	FALSE	canonical	3	2407	junction_2	310.116465577406	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGATCTGCTGTGCTTA	NA	False	NA	8	True	AATAAA	-16	NA	80250060	80265741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ENSMUST00000145967.8	chr2	-	1330	6	FSM	ENSMUSG00000027195.11	ENSMUST00000145967.8	1330	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	299.829684987994	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATTTTTGATAGTGGAA	NA	False	NA	NA	False	AATAAA	-31	NA	93896814	93863033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93882598_93882634_93895898_93895944_93896753
ENSMUST00000145976.2	chr4	-	718	2	FSM	ENSMUSG00000028639.15	ENSMUST00000145976.2	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	10943	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAAGGC	NA	False	NA	9	True	NA	NA	NA	119136647	119135363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119135565_119136130
ENSMUST00000146008.2	chr11	-	3062	12	FSM	ENSMUSG00000025155.16	ENSMUST00000146008.2	3062	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	259.15737584438	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGCAGAGATCTCT	NA	False	NA	-21	True	AATAAA	-12	NA	120687215	120680031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682787_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302
ENSMUST00000146010.3	chr18	+	430	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	24	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACGTGTATGTTGTGTG	NA	False	NA	15	True	AATAAA	-19	NA	33927944	33929039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_33928178_33928435_33928499_33928905
ENSMUST00000146013.8	chrX	+	3696	9	FSM	ENSMUSG00000015291.11	ENSMUST00000146013.8	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_5	44.1572120383522	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGGCTCTTTAGGTTC	5962	False	NA	13	True	AATAAA	-14	NA	73348617	73355466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUST00000146021.8	chr4	-	5074	18	FSM	ENSMUSG00000028906.18	ENSMUST00000146021.8	5074	18	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	24.1593613426437	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5309	False	NA	NA	False	AATAAA	-21	NA	131802632	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
ENSMUST00000146044.8	chr5	-	3707	6	FSM	ENSMUSG00000041890.18	ENSMUST00000146044.8	3707	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	77.0049349067967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTGCCCCCTCT	2305	False	NA	-7	True	AATAAA	-16	NA	114881929	114865471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791
ENSMUST00000146074.8	chr7	+	6867	9	FSM	ENSMUSG00000074221.13	ENSMUST00000146074.8	6867	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	59.6980684360893	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29684723	29727707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
ENSMUST00000146086.8	chr6	-	955	4	FSM	ENSMUSG00000030008.10	ENSMUST00000146086.8	955	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	20.8219969156552	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCCTCAAGGACATCTC	NA	False	NA	NA	False	NA	NA	NA	85428183	85424015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85424671_85424917_85425028_85425472_85425574_85428094
ENSMUST00000146088.8	chr15	+	3749	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAATGTAAATAGCAGT	NA	False	NA	NA	False	TTTAAA	-6	NA	85716506	85743023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ENSMUST00000146088.8-0	chr15	+	2622	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	38	1089	0	0	multi-exon	FALSE	canonical	2	10	junction_3	3.06729262113491	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	85716544	85741934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ENSMUST00000146089.8	chr2	+	750	4	FSM	ENSMUSG00000016344.15	ENSMUST00000146089.8	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	285.921123544395	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGTATGTTTGAAAC	3436	False	NA	1	True	AATAAA	-17	NA	180829139	180830297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180829248_180829457_180829680_180829796_180829894_180829974
ENSMUST00000146103.2	chr16	-	526	3	FSM	ENSMUSG00000022890.14	ENSMUST00000146103.2	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	6096	junction_1	588.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAAATGTCCTTTAAAT	NA	False	NA	-5	True	AATAAA	-15	NA	84628495	84624761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84624884_84625312_84625438_84628216
ENSMUST00000146117.8	chr6	+	1049	10	FSM	ENSMUSG00000034744.14	ENSMUST00000146117.8	1049	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	70.680816193489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAGTTGCGGCATTCTT	9484	False	NA	NA	False	NA	NA	NA	83772189	83779316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83772357_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUST00000146125.8	chr3	-	2292	21	FSM	ENSMUSG00000059834.13	ENSMUST00000146125.8	2292	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_19	11.4169829639883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGCCTTCATCAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	41696463	41581376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685350_41688602_41688671_41696429
ENSMUST00000146137.8	chr1	-	2777	16	FSM	ENSMUSG00000003458.13	ENSMUST00000146137.8	2777	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	134.272790327088	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTTGGTATTCTTC	8996	False	NA	50	True	ATTAAA	-21	NA	171910362	171893579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171908778_171908884_171910167
ENSMUST00000146149.2	chr17	-	463	3	FSM	ENSMUSG00000023951.19	ENSMUST00000146149.2	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_2	64.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCTTCTTTGCTACCTT	NA	False	NA	NA	False	NA	NA	NA	46342282	46336121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46336470_46339276_46339326_46342216
ENSMUST00000146155.8	chr7	+	2233	8	FSM	ENSMUSG00000045411.17	ENSMUST00000146155.8	988	8	0	-1245	0	0	multi-exon	FALSE	canonical	0	0	junction_3	335.825391948779	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896248_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000146165.8	chr3	+	3574	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	8.72576007513895	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTGCTGTGTTTCA	NA	False	NA	12	True	ATTAAA	-22	NA	41697052	41713374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ENSMUST00000146177.8	chrX	+	2870	11	FSM	ENSMUSG00000000838.18	ENSMUST00000146177.8	2870	11	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_8	82.2352722376475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAGAAAATCTTTAC	NA	False	NA	NA	False	NA	NA	NA	67722187	67750499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854
ENSMUST00000146181.8	chr13	-	1742	4	FSM	ENSMUSG00000021485.15	ENSMUST00000146181.8	1742	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	6.23609564462324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTCCTGTCCATGGTTT	6180	False	NA	-3	True	ATTAAA	-12	NA	55477546	55473294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55473712_55473825_55474010_55476182_55477188_55477410
ENSMUST00000146200.8	chr6	+	2385	20	FSM	ENSMUSG00000029686.16	ENSMUST00000146200.8	2385	20	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	99.9423379460748	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAATATAGAGGAAGAC	NA	False	NA	NA	False	AAGAAA	-7	NA	47430837	47500700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632
ENSMUST00000146201.8	chr9	+	2009	6	FSM	ENSMUSG00000032309.16	ENSMUST00000146201.8	2009	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	392.751626349274	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTGTTGTAATTATTG	NA	False	NA	9	True	AATAAA	-16	NA	55116473	55131715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUST00000146243.2	chr2	-	2894	2	FSM	ENSMUSG00000050619.15	ENSMUST00000146243.2	2894	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAACAAAATAACA	NA	False	NA	NA	False	TTTAAA	-41	NA	121001606	120995621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120997200_121000290
ENSMUST00000146258.2	chr4	-	750	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	52	2004	0	-75	multi-exon	FALSE	canonical	3	74	junction_5	47.6377935572167	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGCCTTTGTGTGCAAAA	NA	False	NA	-17	True	AATAAA	-14	NA	99717371	99655642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
ENSMUST00000146280.2	chr8	-	726	3	FSM	ENSMUSG00000031601.17	ENSMUST00000146280.2	726	3	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	66.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTTTAGTTATAGAGA	NA	False	NA	-4	True	AATAAA	-15	NA	40964763	40960358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_40960690_40963055_40963268_40964580
ENSMUST00000146285.8	chr4	+	925	10	FSM	ENSMUSG00000028820.14	ENSMUST00000146285.8	925	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	318.457392928962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126917319	126930806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
ENSMUST00000146297.8	chr2	-	2580	17	FSM	ENSMUSG00000027620.17	ENSMUST00000146297.8	2580	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	722.964372825522	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156021500	155989165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021353
ENSMUST00000146324.8	chr3	-	1264	5	FSM	ENSMUSG00000050174.16	ENSMUST00000146324.8	1264	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	11.0792599030802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTTTTTCTCTACTGA	NA	False	NA	62	True	TATAAA	-29	NA	37474335	37459058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473971
ENSMUST00000146328.4	chr6	-	981	5	FSM	ENSMUSG00000030035.15	ENSMUST00000146328.4	981	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	48.7769156466458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCCTCCCATGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	83098368	83096287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097855_83098183
ENSMUST00000146330.8	chr11	+	1878	8	FSM	ENSMUSG00000006575.15	ENSMUST00000146330.8	1878	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	28.1294384252948	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCATCTGTTGGAGA	3483	False	NA	14	True	AATAAA	-16	NA	102288689	102293381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290872_102291486_102291625_102291719_102291827_102292806
ENSMUST00000146332.2	chr2	+	2504	3	FSM	ENSMUSG00000035772.12	ENSMUST00000146332.2	2504	3	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_2	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGTGTCAGACTCTC	NA	False	NA	15	True	NA	NA	NA	28358101	28361177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28358155_28358254_28358963_28359434
ENSMUST00000146367.2	chr2	-	536	2	FSM	ENSMUSG00000027597.16	ENSMUST00000146367.2	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCGTGCTGCTA	NA	False	NA	NA	False	NA	NA	NA	154916367	154910485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154910939_154916284
ENSMUST00000146384.8	chr4	+	1336	8	FSM	ENSMUSG00000033423.17	ENSMUST00000146384.8	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	303.228680459255	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117421954	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_117422096_117439796_117439914_117444981_117445178_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ENSMUST00000146390.3	chr11	+	2143	2	FSM	ENSMUSG00000047904.7	ENSMUST00000146390.3	2143	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAAGTAAGGTGGTTTTG	NA	False	NA	NA	False	NA	NA	NA	113510167	113516854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_113510449_113514992
ENSMUST00000146392.8	chr2	+	2241	3	FSM	ENSMUSG00000027282.18	ENSMUST00000146392.8	2241	3	0	0	0	0	multi-exon	FALSE	canonical	3	2537	junction_1	192.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAAAAAAGTGATGCC	194	False	NA	NA	False	NA	NA	NA	90677596	90681964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90677730_90679714_90679800_90679941
ENSMUST00000146400.8	chr2	-	836	5	FSM	ENSMUSG00000026860.17	ENSMUST00000146400.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	166.511260880458	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCACCTACCACCACTG	NA	False	NA	NA	False	NA	NA	NA	30237668	30235897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092
ENSMUST00000146409.8	chr18	-	3265	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	0	4549	0	-246	multi-exon	FALSE	canonical	3	28	junction_2	1.4142135623731	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCAGTGGAAGTCTTT	8715	False	NA	NA	False	AAGAAA	-14	NA	61344684	61330539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
ENSMUST00000146429.2	chr7	+	2080	4	FSM	ENSMUSG00000030410.17	ENSMUST00000146429.2	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	52.8288641642889	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	False	NA	13	True	ACTAAA	-13	NA	18811917	18816700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18812163_18813966_18815227_18815843_18815919_18816200
ENSMUST00000146430.8	chr5	-	4582	14	FSM	ENSMUSG00000029192.18	ENSMUST00000146430.8	4582	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	29.1273474052119	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGTGTACTTTGGT	NA	False	NA	0	True	AATAAA	-22	NA	36731669	36647947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36731634
ENSMUST00000146443.8	chr4	-	3278	9	FSM	ENSMUSG00000028906.18	ENSMUST00000146443.8	3278	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	59.7175644178495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131695156	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131691239_131691282_131695098
ENSMUST00000146444.8	chr10	-	4380	7	FSM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	9.12262145560267	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATTTTGTGGCTTGTC	1288	False	NA	-6	True	ATTAAA	-17	NA	7831994	7781416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796379_7800448_7800637_7831564
ENSMUST00000146451.8	chr17	-	2081	5	FSM	ENSMUSG00000050705.16	ENSMUST00000146451.8	2081	5	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	46.1756158594555	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACATAAGGCAGGTTTT	NA	False	NA	-13	True	AATAAA	-9	NA	36208003	36203578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562
ENSMUST00000146454.9	chr2	+	1490	6	FSM	ENSMUSG00000027405.17	ENSMUST00000146454.9	1490	6	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_5	721.25030329283	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTGCCCAT	NA	False	NA	-29	True	NA	NA	NA	130118636	130121173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
ENSMUST00000146458.9	chr5	-	2273	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	0	1400	0	-1002	multi-exon	FALSE	canonical	3	52	junction_3	2.77263412660235	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTATTATTGTTGC	NA	False	NA	NA	False	ATTAAA	-8	NA	110918451	110886937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ENSMUST00000146466.8	chr2	-	2396	9	FSM	ENSMUSG00000039660.17	ENSMUST00000146466.8	2396	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	128.936939528593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTCTCTAGACCCTGAT	NA	False	NA	-28	True	AATAAA	-15	NA	30067996	30063482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30064198_30064933_30065082_30065198_30065825_30065930_30066015_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604
ENSMUST00000146474.8	chr17	-	764	5	FSM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	54.3570372628973	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971_79202099_79202464
ENSMUST00000146490.2	chr11	-	2584	5	FSM	ENSMUSG00000020899.17	ENSMUST00000146490.2	2584	5	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	51.9103795015987	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAACAGACTAGCATGT	NA	False	NA	NA	False	ATTAAA	-12	NA	68881432	68877285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193
ENSMUST00000146497.9	chr2	-	3808	22	FSM	ENSMUSG00000006800.15	ENSMUST00000146497.9	3808	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	257.404161765755	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165997583	165915833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165997422
ENSMUST00000146507.2	chr11	-	375	3	FSM	ENSMUSG00000075611.6	ENSMUST00000146507.2	375	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATACACTGTTGCC	5343	False	NA	NA	False	NA	NA	NA	94648589	94647801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94647979_94648184_94648350_94648556
ENSMUST00000146508.2	chr6	+	2547	3	FSM	ENSMUSG00000030245.11	ENSMUST00000146508.2	367	3	-32	-2148	0	0	multi-exon	FALSE	canonical	3	32	junction_1	306	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGTCAAGTTTATCTT	NA	False	NA	25	True	AATAAA	-19	NA	142332946	142349584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_142333096_142341913_142341996_142347268
ENSMUST00000146510.8	chr5	-	1064	7	FSM	ENSMUSG00000029346.13	ENSMUST00000146510.8	1064	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	14.8884742894182	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112490886	112485257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_112485608_112485867_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ENSMUST00000146511.8	chr5	+	1298	9	FSM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_8	56.9906790624572	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGCTGTTTCCGTCGT	NA	False	NA	23	True	ATTAAA	-23	NA	146885466	146892424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
ENSMUST00000146514.8	chr6	-	2320	5	FSM	ENSMUSG00000018999.15	ENSMUST00000146514.8	2320	5	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	12.49749974995	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCATTGACAGCTTCCC	NA	False	NA	NA	False	NA	NA	NA	34140417	34133657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263
ENSMUST00000146526.8	chr8	-	3662	4	FSM	ENSMUSG00000031821.12	ENSMUST00000146526.8	3662	4	0	0	0	0	multi-exon	FALSE	canonical	3	1091	junction_3	35.3647658929996	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTTCAGCCTAGTGCAA	NA	False	NA	NA	False	AATAAA	-21	NA	121315719	121305371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463
ENSMUST00000146538.2	chr10	+	3847	7	FSM	ENSMUSG00000020156.17	ENSMUST00000146538.2	3847	7	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	43.6603048800878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATAGTCATTGCA	NA	False	NA	17	True	TATAAA	-15	NA	80070093	80079735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80070162_80071944_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUST00000146553.8	chr2	+	770	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	196.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAACCTGTTCAGACATG	NA	False	NA	NA	False	NA	NA	NA	104389507	104398401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_104389830_104390068_104390321_104398205
ENSMUST00000146590.8	chr10	+	3070	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGGTGGGTCTGCA	NA	False	NA	31	True	NA	NA	NA	59715396	59735118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ENSMUST00000146590.8-0	chr10	+	1745	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	43	1282	0	0	multi-exon	FALSE	canonical	3	91	junction_8	64.4659551623956	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGGGATTCAATTAAG	NA	False	NA	20	True	TTTAAA	-3	NA	59715439	59733836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ENSMUST00000146598.8-1	chr3	-	1675	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	0	3215	0	1231	multi-exon	FALSE	canonical	3	324	junction_3	16.7737890770094	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTTCAGGAACAGTT	NA	False	NA	NA	False	AATAAA	-20	NA	53771251	53764011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ENSMUST00000146623.8	chr9	-	4391	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGATTGTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	114763055	114728408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ENSMUST00000146623.8-0	chr9	-	3849	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	108	434	0	-434	multi-exon	FALSE	canonical	3	102	junction_4	10.5540397527222	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114762947	114728842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ENSMUST00000146628.8	chr15	-	2854	5	FSM	ENSMUSG00000022472.17	ENSMUST00000146628.8	2854	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	75.5016556109864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900354	81876723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81887958_81887981_81900078
ENSMUST00000146631.2	chr15	+	819	1	FSM	ENSMUSG00000067547.7	ENSMUST00000146631.2	819	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1561	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGCCGGGCCACGGCCT	NA	False	NA	NA	False	NA	NA	NA	6683403	6684222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_6683400_6684200
ENSMUST00000146638.2	chr19	-	3159	13	FSM	ENSMUSG00000054874.13	ENSMUST00000146638.2	3159	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	8.32666399786453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGCAGTTTTATTTT	7740	False	NA	-5	True	NA	NA	NA	5723975	5714665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507
ENSMUST00000146665.3	chr1	-	2960	4	FSM	ENSMUSG00000033845.14	ENSMUST00000146665.3	1569	4	29	-1420	0	166	multi-exon	FALSE	canonical	3	20	junction_1	1077.56031024821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTTGTCCATTGTCTT	1649	False	NA	NA	False	AATAAA	-17	NA	4855933	4850023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_4852525_4852790_4852957_4854173_4854329_4855795
ENSMUST00000146667.2	chr6	-	574	3	FSM	ENSMUSG00000030177.15	ENSMUST00000146667.2	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	53	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAGAGAGAGAGAGAATT	NA	False	NA	NA	False	NA	NA	NA	120341317	120327168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120327406_120330961_120331016_120341034
ENSMUST00000146673.2	chr16	+	865	3	FSM	ENSMUSG00000086965.2	ENSMUST00000146673.2	865	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	96	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTGAGTACCATGCC	NA	False	NA	NA	False	AAAACA	-1	NA	18317650	18320408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18317702_18317795_18317891_18319689
ENSMUST00000146692.8	chr7	-	4208	7	FSM	ENSMUSG00000010751.16	ENSMUST00000146692.8	2298	7	9	-1919	0	0	multi-exon	FALSE	canonical	3	15	junction_2	62.0232931154811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGGCTTGAATTGGCT	NA	False	NA	NA	False	NA	NA	NA	143203389	143188542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143192174_143192981_143193027_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ENSMUST00000146696.2	chr11	+	813	4	FSM	ENSMUSG00000020407.14	ENSMUST00000146696.2	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	2674	junction_3	158.865421732428	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGGACGGGCCTGAGC	NA	False	NA	-62	True	NA	NA	NA	9083014	9086082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUST00000146719.9	chr15	-	2986	6	FSM	ENSMUSG00000053411.17	ENSMUST00000146719.9	714	6	69	-2341	0	0	multi-exon	FALSE	canonical	3	28	junction_5	171.122646075848	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79818031	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79817965
ENSMUST00000146721.2	chr4	+	2358	2	FSM	ENSMUSG00000028261.14	ENSMUST00000146721.2	2358	2	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGGTTTTTTCTTTC	11	True	NA	14	True	AATAAA	-27	NA	24898130	24903505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_24898677_24901693
ENSMUST00000146736.8	chr15	-	698	9	FSM	ENSMUSG00000022487.15	ENSMUST00000146736.8	698	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	40.4303026825177	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGCAAGTACTTTTTT	9270	False	NA	-2	True	AGTAAA	-16	NA	103337989	103310887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103310986_103313235_103313270_103318050_103318146_103328384_103328449_103328899_103328984_103329616_103329744_103333857_103333959_103336766_103336812_103337939
ENSMUST00000146749.2	chr13	-	1592	7	FSM	ENSMUSG00000069170.15	ENSMUST00000146749.2	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	8.51958527942137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAAAGTGTATATGA	2370	False	NA	NA	False	AATAAA	-18	NA	81781260	81727159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_81727970_81729810_81729925_81732159_81732265_81740676_81740773_81741108_81741259_81743295_81743478_81781125
ENSMUST00000146752.8	chrX	+	1644	4	FSM	ENSMUSG00000031295.14	ENSMUST00000146752.8	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	2.49443825784929	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTTAAAAAAAAAAAGACT	NA	False	NA	NA	False	AGTAAA	-6	NA	159285429	159312808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842
ENSMUST00000146756.8	chr15	+	1081	6	FSM	ENSMUSG00000023051.12	ENSMUST00000146756.8	1081	6	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	33.0248391366256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGCTTGTGTGGGCT	NA	False	NA	NA	False	NA	NA	NA	102427160	102430986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858
ENSMUST00000146819.8	chr8	+	2067	8	FSM	ENSMUSG00000039842.16	ENSMUST00000146819.8	2067	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	14.4391757354209	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTTGACCTGTATACC	NA	False	NA	NA	False	ATTAAA	-22	NA	18645597	18682917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531
ENSMUST00000146824.2	chr8	-	541	3	FSM	ENSMUSG00000031683.17	ENSMUST00000146824.2	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_2	44	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGACTCTTAAGTTTTT	NA	False	NA	15	True	NA	NA	NA	79539843	79534686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79534875_79536575_79536690_79539604
ENSMUST00000146840.3	chr11	-	1828	14	FSM	ENSMUSG00000014195.17	ENSMUST00000146840.3	1828	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	727.332216972515	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAATAAAATGTTTT	NA	False	NA	22	True	ATTAAA	-4	NA	100504183	100473670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100504017
ENSMUST00000146852.2	chr7	-	587	2	FSM	ENSMUSG00000001794.14	ENSMUST00000146852.2	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGAGAGATCAGAGTCCC	NA	False	NA	NA	False	NA	NA	NA	29894461	29892970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29893527_29894430
ENSMUST00000146868.2	chr11	+	355	2	FSM	ENSMUSG00000086015.2	ENSMUST00000146868.2	1269	2	0	914	0	-914	multi-exon	TRUE	canonical	3	111	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGCTATTGTATAAGTC	1026	False	NA	9	True	AATATA	-20	NA	95749690	95750956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95749909_95750819
ENSMUST00000146892.2	chr2	-	520	3	FSM	ENSMUSG00000038740.10	ENSMUST00000146892.2	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	8	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGCTGAAGTGTGTTTT	4213	False	NA	-5	True	AATAAA	-15	NA	33777494	33763625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_33763860_33764349_33764473_33777331
ENSMUST00000146905.2	chr12	-	3710	2	FSM	ENSMUSG00000047446.19	ENSMUST00000146905.2	3710	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGTTAGACTATCAT	NA	False	NA	0	True	AATAAA	-16	NA	40087428	40083289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_40086833_40087261
ENSMUST00000146919.8	chr8	+	3652	10	FSM	ENSMUSG00000054823.18	ENSMUST00000146919.8	3652	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	30.118285328204	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTTTTTTTTCCCA	9685	False	NA	15	True	TTTAAA	-20	NA	26092299	26167988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26166718
ENSMUST00000146919.8-0	chr8	+	2894	10	FSM	ENSMUSG00000054823.18	ENSMUST00000146919.8	3652	10	0	758	0	0	multi-exon	FALSE	canonical	3	19	junction_9	30.118285328204	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTAGTGCCGTTGTCAT	9685	False	NA	NA	False	ATTAAA	-20	NA	26092299	26167230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26166718
ENSMUST00000146924.2	chr16	-	499	2	FSM	ENSMUSG00000022940.18	ENSMUST00000146924.2	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCTTGAGTAGATCTA	NA	False	NA	NA	False	AATAAA	-23	NA	94166376	94165310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_94165647_94166213
ENSMUST00000146927.2	chr7	+	813	5	FSM	ENSMUSG00000006333.15	ENSMUST00000146927.2	813	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	7209.4740229437	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTATTGGTGTGCCTCT	1635	False	NA	0	True	AATAAA	-15	NA	3707362	3709893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709006_3709181_3709649
ENSMUST00000146939.2	chr8	-	432	1	FSM	ENSMUSG00000066902.8	ENSMUST00000146939.2	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	410	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGACAATGGAAACACA	NA	False	NA	NA	False	AAGAAA	-19	NA	3634230	3633798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_3633800_3634200
ENSMUST00000146953.8	chr5	-	3088	9	FSM	ENSMUSG00000070733.14	ENSMUST00000146953.8	3088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	14.5768437941826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTACTGTAAATGGTG	8298	False	NA	-15	True	GATAAA	-16	NA	73204344	73177679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204293
ENSMUST00000146961.2	chr2	-	790	3	FSM	ENSMUSG00000027122.16	ENSMUST00000146961.2	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	19	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATGGGTTGTTTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	106799622	106795535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_106795992_106797444_106797573_106799416
ENSMUST00000146966.2	chr4	+	3057	2	FSM	ENSMUSG00000043572.8	ENSMUST00000146966.2	644	2	3	-2416	0	0	multi-exon	TRUE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508302	106512479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_106508346_106509465
ENSMUST00000146980.2	chr2	+	412	4	FSM	ENSMUSG00000084762.2	ENSMUST00000146980.2	412	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	289.483831826389	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135490826	135493983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_135490892_135491052_135491123_135493417_135493478_135493766
ENSMUST00000147015.2	chr15	-	1038	8	FSM	ENSMUSG00000023755.11	ENSMUST00000147015.2	1038	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	64.8753907620649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGTAGCCTGGATGTT	NA	False	NA	NA	False	NA	NA	NA	98778971	98775926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98778595
ENSMUST00000147044.4	chr7	-	2972	12	FSM	ENSMUSG00000036989.17	ENSMUST00000147044.4	2972	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	16.03560088889	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282692	105259856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282398
ENSMUST00000147061.2	chr13	+	2182	2	FSM	ENSMUSG00000021716.15	ENSMUST00000147061.2	2182	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATAAAAGTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	104970553	104975779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_104970829_104973872
ENSMUST00000147074.2	chr4	-	3358	4	FSM	ENSMUSG00000028873.17	ENSMUST00000147074.2	3358	4	0	0	0	0	multi-exon	FALSE	canonical	3	1608	junction_2	138.468608556436	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGGAAGAAGAAGAAGA	NA	False	NA	-13	True	NA	NA	NA	124830635	124817596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUST00000147076.8	chr17	+	4487	13	FSM	ENSMUSG00000058392.14	ENSMUST00000147076.8	4487	13	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_9	78.6747877164103	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCGGATTGGTCTTTGA	NA	False	NA	13	True	ATTAAA	-15	NA	32267258	32281830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUST00000147105.8	chr2	-	2928	15	FSM	ENSMUSG00000027201.17	ENSMUST00000147105.8	2928	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	219.217253156846	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965581	124929661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124955971_124957357_124957411_124958584_124958794_124965304
ENSMUST00000147110.8	chr2	-	853	7	FSM	ENSMUSG00000015790.17	ENSMUST00000147110.8	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	135.198208403645	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTCCTGCTGCCTGCTA	NA	False	NA	NA	False	NA	NA	NA	26806357	26803588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805782_26806268
ENSMUST00000147114.2	chr7	+	719	5	FSM	ENSMUSG00000002043.18	ENSMUST00000147114.2	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	197.958802532244	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	505	False	NA	21	True	AGTAAA	-22	NA	19242634	19250070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19242758_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ENSMUST00000147115.8	chr9	-	2262	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	63.5314639653475	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCAGTTTTTAAACT	NA	False	NA	NA	False	TATAAA	-17	NA	13738251	13719120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUST00000147117.8	chr16	+	1947	10	FSM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_3	486.088189935799	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACCAAAAAAAGTTTGT	6049	False	NA	NA	False	AATAAA	-13	NA	22926503	22932886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUST00000147125.2	chr7	+	2264	3	FSM	ENSMUSG00000038797.14	ENSMUST00000147125.2	1582	3	-33	-649	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATACCCTGTTTGTCGT	2888	False	NA	NA	False	TTTAAA	-42	NA	80510667	80526285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_80510826_80512915_80513420_80524683
ENSMUST00000147137.2	chr1	-	746	2	FSM	ENSMUSG00000026491.14	ENSMUST00000147137.2	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTCCTTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	179631171	179626411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_179626904_179630917
ENSMUST00000147142.2	chrX	-	636	6	FSM	ENSMUSG00000085556.2	ENSMUST00000147142.2	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	8.86791971095815	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATTGTTTATTGCTG	1134	False	NA	NA	False	NA	NA	NA	134053345	134023626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_134023744_134044969_134045069_134048327_134048426_134050176_134050266_134051692_134051783_134053202
ENSMUST00000147147.8	chr2	-	5953	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_23	50.1601134592868	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCATTGTCTTTTTT	9590	False	NA	NA	False	AATAAA	-17	NA	24809626	24679939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ENSMUST00000147148.5	chr5	+	922	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	5	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTGGTGTGTACTGTT	3407	False	NA	13	True	ATTAAA	-14	NA	53424479	53435882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53424701_53434484_53434542_53435238
ENSMUST00000147163.8	chr11	+	4359	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTATGTGGTTTTAACG	9481	False	NA	101	True	NA	NA	NA	59340870	59349393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
ENSMUST00000147163.8-0	chr11	+	1822	6	FSM	ENSMUSG00000036819.15	ENSMUST00000147163.8	4359	6	76	2461	0	0	multi-exon	FALSE	canonical	3	27	junction_3	10.3614670775909	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGTTCCTTTTTTATA	9557	False	NA	15	True	NA	NA	NA	59340946	59346932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344703_59344886_59345758_59345906_59346132
ENSMUST00000147196.3	chr10	-	860	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	0	0	0	0	multi-exon	TRUE	canonical	3	617	junction_3	154.165135127528	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTCACCGGAGCACTCT	NA	False	NA	-12	True	AATAAA	-17	NA	43416964	43401128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
ENSMUST00000147196.3-0	chr10	-	807	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	-26	79	0	-53	multi-exon	FALSE	canonical	3	617	junction_3	154.165135127528	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCTCCTAATTGTCAG	NA	False	NA	0	True	AATAAA	-17	NA	43416990	43401207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
ENSMUST00000147205.2	chrX	-	411	2	FSM	ENSMUSG00000001134.10	ENSMUST00000147205.2	411	2	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTATTCATCTGTGAAA	NA	False	NA	NA	False	NA	NA	NA	20828213	20827655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20828026_20828172
ENSMUST00000147224.2	chr15	-	2753	4	FSM	ENSMUSG00000044224.17	ENSMUST00000147224.2	2753	4	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_3	16.4991582276861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAATAAATAAATAAA	8553	False	NA	NA	False	NA	NA	NA	10462014	10452700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_10454944_10460040_10460193_10461205_10461511_10461961
ENSMUST00000147232.8	chrX	+	477	4	FSM	ENSMUSG00000031153.17	ENSMUST00000147232.8	477	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	10.3708994574027	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCCCCACCTGTTTCT	3271	False	NA	NA	False	NA	NA	NA	7656244	7660783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498
ENSMUST00000147250.8	chr9	+	4833	25	FSM	ENSMUSG00000032363.16	ENSMUST00000147250.8	4833	25	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_18	7.86065713255295	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCACGGTGGCAGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	90045254	90082043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_90045368_90053526_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90075077_90075919_90076095_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ENSMUST00000147265.9	chr17	+	4010	4	FSM	ENSMUSG00000071172.14	ENSMUST00000147265.9	4010	4	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	325.271510519374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGTAGTCAGTCGAGCG	NA	False	NA	15	True	AATAAA	-15	NA	29251622	29261217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29251761_29255214_29255423_29257463_29260268_29260357
ENSMUST00000147272.8	chr4	+	4251	3	FSM	ENSMUSG00000035649.18	ENSMUST00000147272.8	4251	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	44923117	44932215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_44926071_44929117_44929236_44931035
ENSMUST00000147307.2	chr6	-	2614	2	FSM	ENSMUSG00000004267.17	ENSMUST00000147307.2	2614	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCTGAACTAAGGATTC	8937	False	NA	-1	True	NA	NA	NA	124740575	124737015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124738670_124739615
ENSMUST00000147325.2	chr2	+	1290	6	FSM	ENSMUSG00000069020.10	ENSMUST00000147325.2	681	6	34	-643	0	0	multi-exon	FALSE	canonical	3	23	junction_3	146.238708965855	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTTACTAGCCTTGCT	NA	False	NA	14	True	AATAAA	-16	NA	29717406	29734076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732473_29732559_29732732_29732782_29733114
ENSMUST00000147336.8	chr2	-	2948	11	FSM	ENSMUSG00000037376.15	ENSMUST00000147336.8	2948	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	111.30929880293	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	-12	True	AATAAA	-23	NA	132657975	132646126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ENSMUST00000147337.8	chr2	+	3111	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGTATATTGCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	34297194	34514961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUST00000147337.8-0	chr2	+	2402	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	-321	1030	0	0	multi-exon	FALSE	canonical	3	190	junction_6	16.5988150527989	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGTATGATGGACCATT	NA	False	NA	26	True	AATAAA	-20	NA	34296873	34513931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUST00000147358.8	chr16	-	3021	10	FSM	ENSMUSG00000064061.14	ENSMUST00000147358.8	3021	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	23.3380947522857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	NA	False	NA	-7	True	AATAAA	-18	NA	48759037	48744594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796
ENSMUST00000147383.2	chr2	+	4131	1	FSM	ENSMUSG00000039041.16	ENSMUST00000147383.2	4131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTATGGTCTGGGCCTGTG	NA	False	NA	0	True	AATAAA	-20	NA	179813946	179818077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179813900_179818100
ENSMUST00000147391.3	chr4	-	1011	2	FSM	ENSMUSG00000041459.16	ENSMUST00000147391.3	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTTTCTTTGGTTTGTT	NA	False	NA	78	True	NA	NA	NA	148702824	148701092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148701302_148702022
ENSMUST00000147392.2	chr5	+	644	2	FSM	ENSMUSG00000048439.16	ENSMUST00000147392.2	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTCATAAAGCCTGTCG	7691	False	NA	NA	False	NA	NA	NA	24372505	24374879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24372564_24374293
ENSMUST00000147394.8	chr9	+	452	5	FSM	ENSMUSG00000036781.14	ENSMUST00000147394.8	452	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	5638.10178051975	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTATTTTGGTGTCAGT	NA	False	NA	-14	True	TATAAA	-15	NA	66853447	66856750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855922_66856000_66856610
ENSMUST00000147397.2	chr7	-	3222	8	FSM	ENSMUSG00000030871.12	ENSMUST00000147397.2	3222	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	8.41281820819169	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGTGTTTTGCCTCCAT	NA	False	NA	-1	True	TTTAAA	-18	NA	121666293	121638043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121647798_121654781_121654972_121662151_121662308_121666127
ENSMUST00000147407.2	chr13	-	534	4	FSM	ENSMUSG00000021606.9	ENSMUST00000147407.2	534	4	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_3	967.204333231723	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATAGTGAGTTGTTTCT	NA	False	NA	-8	True	AATAAA	-14	NA	73476571	73467997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476396
ENSMUST00000147413.2	chr1	-	808	2	FSM	ENSMUSG00000026019.16	ENSMUST00000147413.2	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGAGATGTGG	NA	False	NA	NA	False	TTTAAA	-25	NA	60124921	60122243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_60123000_60124869
ENSMUST00000147425.2	chr2	+	1381	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	178.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTACTTGGACAGATTTT	NA	False	NA	NA	False	TATAAA	-29	NA	119424777	119431227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119424916_119426739_119426824_119430068
ENSMUST00000147425.2-0	chr2	+	2074	3	FSM	ENSMUSG00000085438.2	ENSMUST00000147425.2	1381	3	6	-699	0	699	multi-exon	FALSE	canonical	3	71	junction_2	178.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTTTAAGGTAA	NA	False	NA	13	True	AATAAA	-10	NA	119424783	119431926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119424916_119426739_119426824_119430068
ENSMUST00000147427.2	chr17	+	383	2	FSM	ENSMUSG00000023861.18	ENSMUST00000147427.2	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACTGAGGTGGTTCTG	2155	False	NA	NA	False	NA	NA	NA	8502627	8512463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8502794_8512246
ENSMUST00000147442.2	chr15	-	620	2	FSM	ENSMUSG00000022474.16	ENSMUST00000147442.2	620	2	0	0	0	0	multi-exon	FALSE	canonical	3	1141	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTGTTTATTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	81844965	81841541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81842112_81844915
ENSMUST00000147452.2	chr4	+	781	2	FSM	ENSMUSG00000028890.14	ENSMUST00000147452.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATTCATGTTTATA	352	False	NA	4	True	AATAAA	-15	NA	124696374	124699171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124696437_124698452
ENSMUST00000147467.2	chrX	-	1047	5	FSM	ENSMUSG00000031171.12	ENSMUST00000147467.2	1047	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	13.7386316640341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGAAGTCAATGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	8118602	8114760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUST00000147545.8	chr10	+	5511	9	FSM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	4.1514304763539	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGGAACTGTCAAATTT	6969	False	NA	9	True	AATAAA	-20	NA	69932950	70029030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUST00000147561.8	chr7	-	2169	7	FSM	ENSMUSG00000030590.16	ENSMUST00000147561.8	2169	7	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	24.4386988196999	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855608	28851936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28852273_28852746_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
ENSMUST00000147563.9	chr9	-	2464	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	1	4522	0	0	multi-exon	FALSE	canonical	3	232	junction_1	22.8454955443445	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8714	False	NA	-1	True	AATAAA	-16	NA	122942269	122905896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ENSMUST00000147570.3	chr2	-	1133	8	FSM	ENSMUSG00000027404.17	ENSMUST00000147570.3	1133	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	1649.031750539	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCCTCCAAGGCCC	NA	False	NA	NA	False	NA	NA	NA	130021323	130013706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018548_130018673_130018934_130019087_130021153
ENSMUST00000147571.8	chr1	-	1360	6	FSM	ENSMUSG00000026049.12	ENSMUST00000147571.8	1360	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	107.444125013888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTCAGACTAATGTTC	NA	False	NA	NA	False	GATAAA	-28	NA	44141522	44125969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059
ENSMUST00000147582.8	chr10	-	3377	14	FSM	ENSMUSG00000020263.15	ENSMUST00000147582.8	3377	14	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	10.447954982369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTGGGTTGGGTGTGGT	NA	False	NA	NA	False	AATAAA	-17	NA	83484534	83441508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_83441799_83444563_83444617_83444800_83444960_83446841_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ENSMUST00000147590.2	chr2	+	844	3	FSM	ENSMUSG00000054766.14	ENSMUST00000147590.2	844	3	0	0	0	0	multi-exon	FALSE	canonical	3	15823	junction_2	947	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGGTATAGACGGTGAG	NA	False	NA	NA	False	NA	NA	NA	29960181	29961441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29960368_29960452_29960600_29960930
ENSMUST00000147630.2	chr17	+	2684	4	FSM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	43.3615292883245	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCACCTTCTAAGGGAT	NA	False	NA	NA	False	NA	NA	NA	17341676	17367093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720
ENSMUST00000147631.8	chr5	+	3139	5	FSM	ENSMUSG00000023284.16	ENSMUST00000147631.8	748	5	-15	-2376	0	0	multi-exon	FALSE	canonical	3	14	junction_1	18.0052075800308	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTATTTGTGAAGATGT	2193	False	NA	NA	False	NA	NA	NA	110258201	110277660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110258409_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ENSMUST00000147632.3	chr13	+	555	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	1035	junction_1	31.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTTTACTTTGTTTT	NA	False	NA	22	True	AATAAA	-22	NA	34346946	34362156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_34347233_34350043_34350120_34361963
ENSMUST00000147642.2	chr8	+	1865	4	FSM	ENSMUSG00000074247.11	ENSMUST00000147642.2	1865	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	377.602966090045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCCTGTGTATTTTTCTG	NA	False	NA	13	True	NA	NA	NA	71921848	71928742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71927131
ENSMUST00000147650.2	chr2	+	3392	2	FSM	ENSMUSG00000035168.17	ENSMUST00000147650.2	3392	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59672083	59676059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_59672455_59673038
ENSMUST00000147652.8	chr4	-	1017	10	FSM	ENSMUSG00000028898.16	ENSMUST00000147652.8	1017	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	205.952229868128	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAAGGCAGAGGCCTAG	2465	False	NA	-102	True	NA	NA	NA	132056700	132039175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132052662_132052801_132053256_132053357_132055779_132055878_132056663
ENSMUST00000147671.2	chr9	-	1225	6	FSM	ENSMUSG00000059820.15	ENSMUST00000147671.2	1225	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	31.9023510105447	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAGCAAGAAAAAGTCC	106	False	NA	NA	False	NA	NA	NA	50528564	50519000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957
ENSMUST00000147688.8	chr16	-	713	5	FSM	ENSMUSG00000023791.19	ENSMUST00000147688.8	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	176.233332545237	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAACCTAATAAATGAGAC	NA	False	NA	-43	True	NA	NA	NA	31918525	31903276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31903445_31904054_31904156_31911161_31911304_31915817_31915882_31918287
ENSMUST00000147712.8	chr9	+	3495	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	15.2048745018425	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387026	22799570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUST00000147713.8	chr7	-	452	4	FSM	ENSMUSG00000025466.20	ENSMUST00000147713.8	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	198.521759232808	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACTGTAAAGTGAGTG	1606	False	NA	NA	False	NA	NA	NA	139682219	139681015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139681102_139681244_139681316_139681513_139681583_139681993
ENSMUST00000147714.8	chr14	-	4383	19	FSM	ENSMUSG00000022185.20	ENSMUST00000147714.8	4383	19	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_16	159.32330861072	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2945	False	NA	-1	True	AATAAA	-24	NA	54924073	54879618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
ENSMUST00000147718.2	chr11	+	852	3	FSM	ENSMUSG00000017776.16	ENSMUST00000147718.2	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	225.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGGTGTTTCTGAAG	2381	False	NA	NA	False	NA	NA	NA	75570367	75591563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75570491_75583022_75583559_75591370
ENSMUST00000147722.2	chr4	-	1620	2	FSM	ENSMUSG00000086130.2	ENSMUST00000147722.2	1620	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGTTGCAATTGAAGGC	NA	False	NA	NA	False	NA	NA	NA	147755311	147752974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147754501_147755217
ENSMUST00000147729.8	chr5	+	2389	4	FSM	ENSMUSG00000035297.15	ENSMUST00000147729.8	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	1291	junction_2	34.9380403953437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAAAACTG	5407	False	NA	NA	False	AATGAA	-12	NA	100666308	100679961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912
ENSMUST00000147737.8	chr5	-	7691	23	FSM	ENSMUSG00000038126.18	ENSMUST00000147737.8	5959	23	-21	-1711	0	0	multi-exon	FALSE	canonical	3	31	junction_21	7.18368790391303	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465933	124389021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459018_124462936_124463201_124465848
ENSMUST00000147742.9	chrX	-	1991	6	FSM	ENSMUSG00000045010.15	ENSMUST00000147742.9	1991	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	73.271003814606	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838029	100833953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100834130_100834212_100834255_100834844_100834891_100835166_100835250_100835786_100835944_100836542
ENSMUST00000147744.2	chr2	+	2307	9	FSM	ENSMUSG00000039943.17	ENSMUST00000147744.2	2307	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	13.6930639376292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135829795	135856513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
ENSMUST00000147747.8	chr2	+	3299	11	FSM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	0	0	0	0	multi-exon	FALSE	canonical	1	81	junction_2	109.46638753517	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210918	144249596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ENSMUST00000147758.8	chr1	-	3716	7	FSM	ENSMUSG00000041439.16	ENSMUST00000147758.8	3716	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.76095228569523	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACGTGACCAAACAAGAGAA	NA	False	NA	NA	False	AATAAA	-39	NA	52748354	52695685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52697705_52697857_52697883_52699965_52700247_52701548_52701648_52702443_52702606_52715636_52715735_52747322
ENSMUST00000147762.9	chr11	-	611	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	5.24933858267454	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTGATCGGGTTTGA	NA	False	NA	-1	True	NA	NA	NA	6478779	6475590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
ENSMUST00000147778.9	chr10	-	3175	11	FSM	ENSMUSG00000035640.19	ENSMUST00000147778.9	3175	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	10.1788997440784	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9074	False	NA	-6	True	CATAAA	-13	NA	79975199	79966384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972523_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
ENSMUST00000147780.2	chr9	+	1834	9	FSM	ENSMUSG00000004100.13	ENSMUST00000147780.2	1834	9	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_7	71.605582010064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799580	20803474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20799614_20799702_20799874_20800633_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
ENSMUST00000147789.2	chr12	+	730	2	FSM	ENSMUSG00000020649.12	ENSMUST00000147789.2	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	6189	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTTCTGTTATGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	24758554	24759588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_24758634_24758937
ENSMUST00000147790.2	chr13	-	2471	2	FSM	ENSMUSG00000041431.17	ENSMUST00000147790.2	2471	2	0	0	0	0	multi-exon	FALSE	canonical	3	4063	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTTCACAATTCTCAT	NA	False	NA	-21	True	AATAAA	-13	NA	100917961	100915254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100916294_100916529
ENSMUST00000147797.8	chr4	+	2419	6	FSM	ENSMUSG00000028948.17	ENSMUST00000147797.8	2419	6	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_2	28.4857859291261	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAATACTCCTGTTA	7339	False	NA	NA	False	NA	NA	NA	152123777	152136686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152131102_152134991_152135154_152136214
ENSMUST00000147799.8	chr1	+	855	5	FSM	ENSMUSG00000003464.14	ENSMUST00000147799.8	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	19.600701518058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTTGACTGATTCATT	NA	False	NA	NA	False	TATAAA	-14	NA	171954322	171958578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178
ENSMUST00000147820.2	chr2	+	599	6	FSM	ENSMUSG00000078887.11	ENSMUST00000147820.2	599	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	84.5846321739357	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTAACCAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	175661037	175671684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_175661175_175664841_175664897_175666200_175666303_175670021_175670149_175670349_175670411_175671567
ENSMUST00000147823.2	chr10	-	499	3	FSM	ENSMUSG00000020184.16	ENSMUST00000147823.2	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	237.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATCTCCTAGGAGATG	NA	False	NA	NA	False	NA	NA	NA	117546197	117538163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117538241_117541059_117541135_117545850
ENSMUST00000147826.2	chr4	+	940	4	FSM	ENSMUSG00000047613.11	ENSMUST00000147826.2	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	332.870345129551	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGATGAATTCTGCTGGAA	NA	False	NA	NA	False	NA	NA	NA	154041722	154046260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_154041780_154044212_154044320_154044987_154045450_154045946
ENSMUST00000147830.2	chrX	-	3071	2	FSM	ENSMUSG00000031200.17	ENSMUST00000147830.2	3071	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTCAAGATAACTCA	NA	False	NA	NA	False	CATAAA	-18	NA	74460174	74456779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74459820_74460143
ENSMUST00000147839.8	chr5	-	2223	2	FSM	ENSMUSG00000036555.15	ENSMUST00000147839.8	2223	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	NA	False	NA	NA	False	AGTAAA	-18	NA	140651996	140649259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_140651249_140651762
ENSMUST00000147845.2	chr4	-	776	2	FSM	ENSMUSG00000033379.14	ENSMUST00000147845.2	776	2	0	0	0	0	multi-exon	FALSE	canonical	3	2659	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTGGCCTAGCAATT	NA	False	NA	NA	False	NA	NA	NA	117744524	117743518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117743557_117743786
ENSMUST00000147862.2	chr6	+	1894	2	FSM	ENSMUSG00000040242.15	ENSMUST00000147862.2	1894	2	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAGGAAGAAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	146479439	146488806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146479707_146487179
ENSMUST00000147867.3	chr16	-	1078	7	FSM	ENSMUSG00000033809.16	ENSMUST00000147867.3	1078	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	158.953260076316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAACGGACTCTGTG	NA	False	NA	-55	True	NA	NA	NA	20429511	20424268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427491_20427640_20429329
ENSMUST00000147873.8	chr2	+	1939	4	FSM	ENSMUSG00000026930.16	ENSMUST00000147873.8	977	4	0	-962	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.25718035235908	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTGTTGGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	26232300	26238249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26232443_26234613_26234771_26235162_26235372_26236818
ENSMUST00000147875.9	chr11	+	512	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	20	7503	0	92	multi-exon	FALSE	canonical	3	164	junction_1	44.0782133132559	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTTTTTGCTTCT	NA	False	NA	14	True	NA	NA	NA	78717429	78730193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ENSMUST00000147884.2	chr16	-	1145	5	FSM	ENSMUSG00000022498.17	ENSMUST00000147884.2	1145	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	53.399438199292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGAACTCTTTATCTC	8534	False	NA	NA	False	TTTAAA	-6	NA	10952514	10923820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_10924136_10934658_10934789_10940533_10940632_10946350_10946570_10952131
ENSMUST00000147908.2	chr10	-	1046	2	FSM	ENSMUSG00000034792.9	ENSMUST00000147908.2	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACTGAGGAAGAGAGAAA	6420	False	NA	NA	False	AATAAA	-25	NA	81344007	81338139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81338940_81343761
ENSMUST00000147914.8	chr10	+	3041	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGGTCTGCATTGAAC	NA	False	NA	37	True	NA	NA	NA	59715377	59735124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUST00000147914.8-0	chr10	+	1691	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	62	1288	0	0	multi-exon	FALSE	canonical	3	150	junction_8	46.5154544210846	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAGGGATTCAATTAAG	NA	False	NA	20	True	TTTAAA	-3	NA	59715439	59733836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUST00000147928.8-1	chrX	-	1596	6	FSM	ENSMUSG00000031370.13	ENSMUST00000147928.8	460	6	-109	-1027	0	978	multi-exon	FALSE	canonical	3	79	junction_5	268.200372855818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741657	162735608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
ENSMUST00000147960.2	chr3	-	903	2	FSM	ENSMUSG00000005625.16	ENSMUST00000147960.2	903	2	0	0	0	0	multi-exon	FALSE	canonical	3	2127	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTCCAGGTGTGGATCC	NA	False	NA	NA	False	NA	NA	NA	94941227	94940238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94940858_94940943
ENSMUST00000147969.8	chr5	+	2112	8	FSM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	287.390653562537	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCACAGAAAACAACTT	4408	False	NA	NA	False	AAAAAG	-16	NA	124583567	124599606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124583792_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUST00000147969.8-0	chr5	+	2877	8	FSM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	0	-765	0	0	multi-exon	FALSE	canonical	3	31	junction_1	287.390653562537	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	4408	False	NA	29	True	AATAAA	-38	NA	124583567	124600371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124583792_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUST00000148011.8	chr5	+	2895	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	61	2526	0	0	multi-exon	FALSE	canonical	3	72	junction_4	18.4303708977484	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCATGTCTGCAGTTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	143846842	143868260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ENSMUST00000148036.7	chr2	-	2792	5	FSM	ENSMUSG00000039483.11	ENSMUST00000148036.7	2792	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	10.6858551365813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1761	False	NA	-19	True	ATTAAA	-19	NA	30718266	30713108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30714517_30714652_30715573_30715666_30715774_30716934_30717111_30718085
ENSMUST00000148086.8	chr9	-	2467	11	FSM	ENSMUSG00000031922.13	ENSMUST00000148086.8	2467	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	79.3466445415306	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGCTAACAAAGGCTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	13738348	13719090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732970_13738141
ENSMUST00000148088.2	chr9	+	676	2	FSM	ENSMUSG00000010607.9	ENSMUST00000148088.2	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGGAACACGACCAGCC	NA	False	NA	11	True	AATAAA	-11	NA	22068241	22069621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22068324_22069027
ENSMUST00000148093.2	chr16	-	787	2	FSM	ENSMUSG00000034064.15	ENSMUST00000148093.2	787	2	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACTCAGTATGTAGAACA	NA	False	NA	NA	False	NA	NA	NA	38358329	38354460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_38355187_38358268
ENSMUST00000148098.3	chr11	-	1322	3	FSM	ENSMUSG00000014195.17	ENSMUST00000148098.3	1322	3	0	0	0	0	multi-exon	FALSE	canonical	3	2298	junction_1	71.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAGCTGAGAATGACCA	7216	False	NA	NA	False	NA	NA	NA	100487005	100481202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100482392_100483680_100483800_100486991
ENSMUST00000148102.2	chr15	-	466	1	FSM	ENSMUSG00000085442.2	ENSMUST00000148102.2	466	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAACTGAGTCCAGATGG	NA	False	NA	NA	False	NA	NA	NA	37944036	37943570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37943600_37944000
ENSMUST00000148105.2	chr19	+	991	3	FSM	ENSMUSG00000023307.15	ENSMUST00000148105.2	991	3	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAAAAAAAAATAGTGGA	NA	False	NA	NA	False	AGTAAA	-24	NA	37184974	37195040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_37185304_37188069_37188273_37194581
ENSMUST00000148130.2	chr11	-	388	3	FSM	ENSMUSG00000020415.17	ENSMUST00000148130.2	388	3	0	0	0	0	multi-exon	FALSE	canonical	3	2427	junction_2	3676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGTGTGCAGTTACATA	NA	False	NA	NA	False	AAGAAA	-45	NA	43317040	43315448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_43315725_43316409_43316509_43317027
ENSMUST00000148150.8	chr7	-	859	5	FSM	ENSMUSG00000005447.13	ENSMUST00000148150.8	859	5	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_2	17.4570902500961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACCCCAACCCACTTCG	8603	False	NA	NA	False	NA	NA	NA	24997307	24994783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796
ENSMUST00000148204.8	chr4	-	923	4	FSM	ENSMUSG00000040842.18	ENSMUST00000148204.8	3202	4	-39	2318	0	1248	multi-exon	FALSE	canonical	3	37	junction_2	172.554017307303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGCCTTTCTTTTTTT	NA	False	NA	-25	True	NA	NA	NA	140867077	140842629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_140843176_140845837_140846090_140847634_140847685_140867002
ENSMUST00000148208.2	chr5	-	1865	7	FSM	ENSMUSG00000029513.15	ENSMUST00000148208.2	794	7	-11	-1060	0	0	multi-exon	FALSE	canonical	2	5	junction_3	82.0135490161365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTGACTCGGCACA	NA	False	NA	-4	True	AATAAA	-21	NA	116162521	116151648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ENSMUST00000148219.9	chr19	-	727	7	FSM	ENSMUSG00000024914.17	ENSMUST00000148219.9	727	7	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	395.234705235031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGGTTTCTTTTCATCC	NA	False	NA	NA	False	NA	NA	NA	5474787	5472833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5473004_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUST00000148235.8	chr8	-	1459	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTTGCAGAGTGGCTT	NA	False	NA	NA	False	AATAAA	-32	NA	117648194	117615423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ENSMUST00000148235.8-0	chr8	-	610	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	16	833	0	0	multi-exon	FALSE	canonical	3	303	junction_2	17.3076733143296	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTCCCTTTCTTTAAC	NA	False	NA	-5	True	AATAAA	-15	NA	117648178	117616256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ENSMUST00000148242.8	chr11	-	1301	7	FSM	ENSMUSG00000018761.15	ENSMUST00000148242.8	971	7	0	-330	0	0	multi-exon	FALSE	canonical	3	35	junction_4	228.446018423026	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	6816	False	NA	-4	True	AATAAA	-33	NA	69553413	69547522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548883_69549391_69549525_69549636_69549703_69553294
ENSMUST00000148262.2	chr2	-	1837	6	FSM	ENSMUSG00000090213.2	ENSMUST00000148262.2	1837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	97.6409750053736	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCTGGTTGCCGTGTGG	NA	False	NA	-8	True	AATATA	-25	NA	167531742	167485147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167531430
ENSMUST00000148270.8	chr5	-	1155	9	FSM	ENSMUSG00000001082.13	ENSMUST00000148270.8	1155	9	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_6	35.7805813256297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTCTGCTTCACTGTGTG	NA	False	NA	NA	False	NA	NA	NA	34793468	34791338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364
ENSMUST00000148274.8	chr11	+	1245	6	FSM	ENSMUSG00000020366.19	ENSMUST00000148274.8	1245	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	26.8029849084015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCATGTGATTATTTA	NA	False	NA	NA	False	AATAAA	-21	NA	49737719	49764224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560
ENSMUST00000148295.8	chr2	+	662	4	FSM	ENSMUSG00000032966.15	ENSMUST00000148295.8	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	221.63232816737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTACATGTAGCT	NA	False	NA	NA	False	NA	NA	NA	151384534	151401748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377
ENSMUST00000148313.8	chr7	-	1406	7	FSM	ENSMUSG00000019734.17	ENSMUST00000148313.8	1406	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	4.86483983977547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGCACTATGGCACAC	6324	False	NA	NA	False	NA	NA	NA	3679626	3673575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3674101_3674272_3674441_3674961_3675110_3677585_3677708_3677848_3678082_3678424_3678571_3679562
ENSMUST00000148314.3	chr2	-	1240	1	FSM	ENSMUSG00000087006.4	ENSMUST00000148314.3	1240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGGGCTTTGGACTT	NA	False	NA	-3	True	AATAAA	-23	NA	93787394	93786154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93786200_93787400
ENSMUST00000148323.2	chr12	-	401	2	FSM	ENSMUSG00000021252.12	ENSMUST00000148323.2	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGCCTAACATCCATAG	NA	False	NA	NA	False	AATACA	-1	NA	85869024	85866105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85866344_85868861
ENSMUST00000148326.8	chrX	-	4231	3	FSM	ENSMUSG00000087403.10	ENSMUST00000148326.8	584	3	25	-3672	0	0	multi-exon	FALSE	canonical	3	54	junction_1	13.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACTGTGTGACTTCC	NA	False	NA	NA	False	NA	NA	NA	151110466	151077823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151081871_151110156_151110236_151110361
ENSMUST00000148330.8	chr1	-	1705	12	FSM	ENSMUSG00000026034.18	ENSMUST00000148330.8	1705	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	47.751422461613	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463225	58451158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ENSMUST00000148331.9	chr4	-	3405	14	FSM	ENSMUSG00000028382.16	ENSMUST00000148331.9	2016	14	0	-1389	0	0	multi-exon	FALSE	canonical	3	25	junction_12	40.1538461538462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTTGTTAATTATTTC	5	True	NA	-18	True	NA	NA	NA	59549314	59475258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59549147
ENSMUST00000148338.8	chr3	-	381	5	FSM	ENSMUSG00000027746.14	ENSMUST00000148338.8	381	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	16.1012421881046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAACAGGGAAAGCGGCC	NA	False	NA	40	True	AATGAA	-15	NA	53771110	53765242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034
ENSMUST00000148381.3	chr7	-	959	6	FSM	ENSMUSG00000002635.12	ENSMUST00000148381.3	959	6	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_1	296.710903068964	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTTTACCTTAT	5785	False	NA	NA	False	ATTAAA	-20	NA	33896033	33884057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33884237_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ENSMUST00000148385.8	chr3	+	4057	24	FSM	ENSMUSG00000034349.15	ENSMUST00000148385.8	4057	24	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	205.937434292797	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912340	68941956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_68912424_68913408_68913558_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ENSMUST00000148387.2	chr11	-	671	2	FSM	ENSMUSG00000069910.3	ENSMUST00000148387.2	671	2	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCTTGAGCCTGAAGTC	NA	False	NA	NA	False	NA	NA	NA	34724419	34721160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_34721727_34724314
ENSMUST00000148388.2	chr2	+	4059	6	FSM	ENSMUSG00000078864.11	ENSMUST00000148388.2	744	6	0	-3315	0	2805	multi-exon	FALSE	canonical	3	97	junction_4	86.0497530501977	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	177401080	177415070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_177401169_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
ENSMUST00000148393.2	chr11	-	562	3	FSM	ENSMUSG00000051232.14	ENSMUST00000148393.2	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	29	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTAAGGCCTATGTTCC	1720	False	NA	NA	False	NA	NA	NA	78402909	78400339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78400641_78401173_78401248_78402722
ENSMUST00000148403.2	chr7	+	343	4	FSM	ENSMUSG00000035674.14	ENSMUST00000148403.2	343	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1620.57650921585	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTCTTTCGTGGGTT	273	False	NA	22	True	AATAAA	-24	NA	3620389	3623162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3620417_3620615_3620691_3622428_3622507_3622999
ENSMUST00000148406.8	chr4	+	1071	4	FSM	ENSMUSG00000073684.14	ENSMUST00000148406.8	1071	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	99.7697348898953	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTGTTTCCTTCATA	NA	False	NA	4	True	NA	NA	NA	155334422	155341140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155334520_155334963_155335108_155335212_155335494_155340591
ENSMUST00000148428.2	chr9	-	942	6	FSM	ENSMUSG00000032400.19	ENSMUST00000148428.2	942	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	405.831196435168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCAGTATCGACACAGG	NA	False	NA	NA	False	NA	NA	NA	64063032	64054674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64054689_64056680_64056710_64057437_64057595_64060166_64060218_64060828_64060933_64062445
ENSMUST00000148434.2	chr11	-	1992	9	FSM	ENSMUSG00000018697.15	ENSMUST00000148434.2	1992	9	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_4	26.8348537353942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84404348	84357730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ENSMUST00000148437.8	chr6	-	817	6	FSM	ENSMUSG00000030304.12	ENSMUST00000148437.8	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	910	junction_4	66.0593672388708	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAGCATAAAGGAAAAGC	NA	False	NA	NA	False	NA	NA	NA	148113475	148100455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUST00000148442.8	chr7	+	4005	10	FSM	ENSMUSG00000074221.13	ENSMUST00000148442.8	4005	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	68.6080296204101	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATTTGTACACT	NA	False	NA	NA	False	NA	NA	NA	29683379	29724536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29683654_29684684_29684752_29687013_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ENSMUST00000148454.2	chr2	+	3733	8	FSM	ENSMUSG00000039463.15	ENSMUST00000148454.2	3733	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	38.6665493781942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGTTGTGTCACGTGT	NA	False	NA	6	True	AATAAA	-19	NA	167293074	167318919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167293271_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUST00000148460.8	chr2	+	2088	5	FSM	ENSMUSG00000005804.15	ENSMUST00000148460.8	2088	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	54.4443523241851	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGGCTGGCGATTCTTTT	8285	False	NA	4	True	AATAAA	-16	NA	122580438	122590019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122580625_122584508_122584651_122586049_122586134_122587974_122588062_122588430
ENSMUST00000148482.8	chr17	-	1193	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	123.227269709265	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	-3	True	AATAAA	-19	NA	36208012	36203568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
ENSMUST00000148500.2	chr2	+	1468	3	FSM	ENSMUSG00000027425.19	ENSMUST00000148500.2	1468	3	0	0	0	0	multi-exon	FALSE	canonical	1	121	junction_2	118	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCACTCAGCTTGTCTT	NA	False	NA	39	True	AATAAA	-45	NA	144244266	144249595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144244491_144245918_144246110_144248542
ENSMUST00000148520.2	chr11	-	1779	3	FSM	ENSMUSG00000025384.16	ENSMUST00000148520.2	1779	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	20.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-29	NA	120269535	120266995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120268488_120269153_120269273_120269367
ENSMUST00000148525.2	chr18	-	737	2	FSM	ENSMUSG00000051469.15	ENSMUST00000148525.2	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTGGAACCATCTCCC	NA	False	NA	NA	False	NA	NA	NA	24153427	24151027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24151226_24152888
ENSMUST00000148535.2	chr11	+	966	2	FSM	ENSMUSG00000018286.7	ENSMUST00000148535.2	966	2	0	0	0	0	multi-exon	FALSE	canonical	3	6021	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGGGTATGATGGTAAG	NA	False	NA	NA	False	NA	NA	NA	70416935	70418019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70417252_70417369
ENSMUST00000148537.2	chr17	+	510	2	FSM	ENSMUSG00000023939.8	ENSMUST00000148537.2	510	2	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTTGTGTGAGCAGAG	NA	False	NA	-58	True	NA	NA	NA	46006341	46009326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46006499_46008973
ENSMUST00000148555.8	chr2	-	2038	13	FSM	ENSMUSG00000039648.15	ENSMUST00000148555.8	2038	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	50.7807788439681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095828	30075137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065_30084125_30095644
ENSMUST00000148561.2	chr4	+	851	2	FSM	ENSMUSG00000028248.16	ENSMUST00000148561.2	851	2	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCCAGCTCAGGCAGC	-1	True	NA	NA	False	NA	NA	NA	21871033	21873864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21871609_21873588
ENSMUST00000148573.2	chr8	+	1118	3	FSM	ENSMUSG00000003812.14	ENSMUST00000148573.2	1118	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	1.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATATAGAGTGGGGGTG	NA	False	NA	4	True	AATAAA	-16	NA	85640019	85649544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85640158_85647022_85647134_85648675
ENSMUST00000148592.2	chr8	+	798	3	FSM	ENSMUSG00000059355.14	ENSMUST00000148592.2	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	13.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGCTTCTCTTTTGTTC	NA	False	NA	36	True	TATAAA	-25	NA	85807601	85808968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85807908_85808405_85808504_85808574
ENSMUST00000148600.3	chr1	+	1651	2	FSM	ENSMUSG00000018196.19	ENSMUST00000148600.3	1651	2	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGATGAACGTCGCAGCC	NA	False	NA	NA	False	NA	NA	NA	143615303	143618843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143615497_143617385
ENSMUST00000148601.2	chr11	-	3538	13	FSM	ENSMUSG00000020777.17	ENSMUST00000148601.2	3538	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_12	27.5116137092845	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGTTACGTGTAGA	6553	False	NA	1	True	AATAAA	-15	NA	116080401	116062713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116080240
ENSMUST00000148618.8	chr5	-	3266	17	FSM	ENSMUSG00000057541.15	ENSMUST00000148618.8	3266	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	125.308556671123	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGTAAAAATCTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	23988551	23945646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23968331_23968350_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ENSMUST00000148631.8	chr9	-	3756	4	FSM	ENSMUSG00000066892.15	ENSMUST00000148631.8	3756	4	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	35.3270434653114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556043	20549081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20550495_20553319_20553393_20553499_20555595_20555868
ENSMUST00000148633.4	chr5	+	2251	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACATTCCATAAGCA	NA	False	NA	-16	True	AGTAAA	-21	NA	8106526	8119151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ENSMUST00000148633.4-1	chr5	+	925	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	35	1291	0	134	multi-exon	FALSE	canonical	3	434	junction_5	36.6795277382635	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATATTTTCTTGTGA	NA	False	NA	5	True	TATAAA	-22	NA	8106561	8117860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ENSMUST00000148643.8	chr2	-	2078	7	FSM	ENSMUSG00000017670.17	ENSMUST00000148643.8	2078	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	122.481858067044	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165138897	165131074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_165132482_165134024_165134103_165136160_165136232_165136933_165137042_165137163_165137277_165137382_165137547_165138760
ENSMUST00000148650.8	chr2	+	3460	21	FSM	ENSMUSG00000026785.15	ENSMUST00000148650.8	3460	21	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_6	20.1955440629858	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	1377	False	NA	15	True	AATAAA	-17	NA	29967754	29981025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29967812_29969545_29969775_29969937_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ENSMUST00000148661.2	chr14	-	2719	18	FSM	ENSMUSG00000041594.19	ENSMUST00000148661.2	2719	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_17	41.7946868363775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGAAACCTTTTT	NA	False	NA	NA	False	NA	NA	NA	123220554	123157171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220350
ENSMUST00000148665.8	chr10	+	2213	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	0	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4352	False	NA	29	True	ATTAAA	-17	NA	80634031	80640758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ENSMUST00000148665.8-0	chr10	+	1679	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	534	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_7	118.037004261376	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4886	False	NA	29	True	ATTAAA	-17	NA	80634565	80640758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ENSMUST00000148717.8	chr2	-	1483	4	FSM	ENSMUSG00000015335.17	ENSMUST00000148717.8	1483	4	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	33.2966464777861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983031	29980955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416
ENSMUST00000148721.8	chr17	-	1293	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	90.4765162901402	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	-3	True	AATAAA	-19	NA	36208323	36203568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
ENSMUST00000148754.10	chr14	-	2373	13	FSM	ENSMUSG00000022185.20	ENSMUST00000148754.10	2373	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	140.751628172939	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3738	False	NA	-1	True	AATAAA	-24	NA	54891158	54879618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54891136
ENSMUST00000148765.2	chr12	-	1431	2	FSM	ENSMUSG00000037904.15	ENSMUST00000148765.2	1431	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGATCTGCCTGGTCTG	NA	False	NA	-6	True	NA	NA	NA	110944689	110942859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110943983_110944381
ENSMUST00000148769.8	chr3	-	2769	21	FSM	ENSMUSG00000059834.13	ENSMUST00000148769.8	2769	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	11.6252956951641	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGCCTTCATCAATGT	NA	False	NA	NA	False	AATAAA	-16	NA	41696916	41581376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625938_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ENSMUST00000148787.2	chr16	-	817	2	FSM	ENSMUSG00000022890.14	ENSMUST00000148787.2	817	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTTGATTACCCCACC	NA	False	NA	NA	False	TATAAA	-42	NA	84632417	84631163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84631872_84632308
ENSMUST00000148801.2	chr5	-	372	1	FSM	ENSMUSG00000086167.4	ENSMUST00000148801.2	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGGGAAAAAAAAAAAAACA	2406	False	NA	NA	False	NA	NA	NA	115191899	115191527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115191500_115191900
ENSMUST00000148807.11	chr19	+	937	7	FSM	ENSMUSG00000024845.20	ENSMUST00000148807.11	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	194.337907321815	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCACTTTCCTGGGCC	4390	False	NA	NA	False	AATAAA	-24	NA	4175978	4181734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4176200_4177055_4177132_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUST00000148810.8	chr1	+	6531	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_12	16.2156327524439	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGTTGCTCATTTATC	NA	False	NA	11	True	AATAAA	-19	NA	151447123	151597690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ENSMUST00000148843.10	chr4	+	2686	11	FSM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	0	18766	0	0	multi-exon	FALSE	canonical	3	130	junction_1	138.01771625411	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUST00000148861.8	chr7	+	1099	5	FSM	ENSMUSG00000023118.16	ENSMUST00000148861.8	1099	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	20.6276513447363	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCCTGAGGATGTGCC	NA	False	NA	10	True	AATAAA	-24	NA	18786261	18788537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ENSMUST00000148880.2	chr7	+	478	4	FSM	ENSMUSG00000030779.17	ENSMUST00000148880.2	478	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.9827560572969	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCTACAAGCAAGACAT	2688	False	NA	NA	False	NA	NA	NA	122564908	122575231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_122565043_122568615_122568706_122570169_122570351_122575158
ENSMUST00000148881.8	chr3	+	676	4	FSM	ENSMUSG00000028049.16	ENSMUST00000148881.8	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	179.651514512588	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCACAGATGCCCTGGG	NA	False	NA	NA	False	NA	NA	NA	89084843	89086971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623
ENSMUST00000148894.2	chr17	+	1672	10	FSM	ENSMUSG00000024188.17	ENSMUST00000148894.2	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	196.74976273379	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTACATTAGTGTATT	NA	False	NA	17	True	ATTAAA	-29	NA	26471972	26499697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUST00000148900.8	chr4	+	3051	4	FSM	ENSMUSG00000037266.19	ENSMUST00000148900.8	3051	4	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_2	40.8493165997507	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTAGTTGTGAATGGTAG	NA	False	NA	9	True	NA	NA	NA	134650902	134654982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_134651079_134651185_134651794_134652603_134654130_134654241
ENSMUST00000148914.2	chr6	+	882	2	FSM	ENSMUSG00000030060.15	ENSMUST00000148914.2	882	2	0	0	0	0	multi-exon	FALSE	canonical	3	1023	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGCTCTTCTCAGTCTC	NA	False	NA	-56	True	NA	NA	NA	87909974	87913511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_87910417_87913071
ENSMUST00000148933.8	chr7	-	1140	6	FSM	ENSMUSG00000089832.9	ENSMUST00000148933.8	1140	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	134.483604948707	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACTGTTTATAGTCTTG	NA	False	NA	-33	True	AATAAA	-12	NA	27045027	27041562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27044841
ENSMUST00000148934.8	chr4	+	2042	16	FSM	ENSMUSG00000029056.14	ENSMUST00000148934.8	2042	16	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	33.9585368092063	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACACATATACATATAT	NA	False	NA	NA	False	NA	NA	NA	155054455	155065346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
ENSMUST00000148955.3	chr18	+	1572	7	FSM	ENSMUSG00000025421.16	ENSMUST00000148955.3	3069	7	0	1497	0	0	multi-exon	FALSE	canonical	0	0	junction_2	159.414292542001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	False	NA	19	True	NA	NA	NA	77032132	77059101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77032224_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUST00000148960.8	chr17	-	1299	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	0	638	0	0	multi-exon	FALSE	canonical	3	2551	junction_2	294.524475496803	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTGTTTAGCGTTA	1927	False	NA	-19	True	ATTAAA	-14	NA	71309549	71301288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ENSMUST00000148966.2	chr16	+	2315	5	FSM	ENSMUSG00000022679.14	ENSMUST00000148966.2	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	78.6431815226215	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGATTTGGGTATTGTCA	521	False	NA	9	True	NA	NA	NA	13758558	13766446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_13758888_13759983_13760038_13762529_13762601_13764421_13764452_13764615
ENSMUST00000148968.8	chrX	-	1316	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	83.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGACTTGAGAGGTATT	NA	False	NA	NA	False	GATAAA	-21	NA	149242150	149191573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149192597_149203337_149203438_149241957
ENSMUST00000148968.8-0	chrX	-	577	3	FSM	ENSMUSG00000041353.13	ENSMUST00000148968.8	1316	3	4	735	0	-142	multi-exon	FALSE	canonical	3	95	junction_2	83.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTCTTGGCTTTTGTTTG	NA	False	NA	NA	False	TATAAA	-22	NA	149242146	149192308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149192597_149203337_149203438_149241957
ENSMUST00000148976.2	chr4	+	1130	5	FSM	ENSMUSG00000028410.14	ENSMUST00000148976.2	1130	5	0	0	0	0	multi-exon	FALSE	canonical	3	2624	junction_1	118.611498177875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCCAGTTAAAATTGAAA	6	False	NA	NA	False	ATTAAA	-40	NA	40724048	40732263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683
ENSMUST00000148989.3-1	chr18	+	3166	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148989.3	1002	2	64	-2228	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAGAAAAAATTGTGTT	NA	False	NA	NA	False	NA	NA	NA	50112557	50226296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_50112694_50223266
ENSMUST00000149004.2	chr16	+	1779	4	FSM	ENSMUSG00000033031.14	ENSMUST00000149004.2	1779	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	19.94993734326	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAGATCAGTACTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	48836199	48840072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_48836421_48836641_48836725_48837714_48837855_48838737
ENSMUST00000149026.5	chr6	+	818	5	FSM	ENSMUSG00000054226.14	ENSMUST00000149026.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.3901035998916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGTCTTCCAGAAATA	3469	False	NA	NA	False	NA	NA	NA	85892779	85904922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85893090_85898404_85898494_85901341_85901505_85904222_85904346_85904789
ENSMUST00000149027.8	chr17	+	493	2	FSM	ENSMUSG00000000579.15	ENSMUST00000149027.8	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	5304	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAACAACCACATGGTGG	NA	False	NA	NA	False	NA	NA	NA	6869190	6871333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6869236_6870885
ENSMUST00000149033.2	chr11	-	1207	2	FSM	ENSMUSG00000018669.15	ENSMUST00000149033.2	1207	2	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGAGCGAGGCTCGG	NA	False	NA	NA	False	NA	NA	NA	96803695	96802281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96802836_96803042
ENSMUST00000149054.8	chrX	+	898	4	FSM	ENSMUSG00000044150.13	ENSMUST00000149054.8	898	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	176.99905837791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCTTTATTTTTCAG	NA	False	NA	NA	False	NA	NA	NA	158349844	158375198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158350362_158350914_158351011_158357940_158358094_158375066
ENSMUST00000149085.8	chr5	-	2552	9	FSM	ENSMUSG00000028959.15	ENSMUST00000149085.8	2552	9	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	118.721049102508	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	False	NA	-5	True	NA	NA	NA	24650185	24646037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892
ENSMUST00000149094.8	chr2	+	2076	8	FSM	ENSMUSG00000039356.16	ENSMUST00000149094.8	2076	8	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_5	49.3699073839727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAGAAAACCAAAGA	NA	False	NA	-20	True	NA	NA	NA	31560730	31570992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31566749_31568462_31568640_31569862_31569992_31570501
ENSMUST00000149123.3	chr6	-	2674	4	FSM	ENSMUSG00000029569.10	ENSMUST00000149123.3	3337	4	56	607	0	-607	multi-exon	FALSE	canonical	3	13	junction_3	103.721850264167	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-13	True	NA	NA	False	ATTAAA	-19	NA	13608043	13581292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13607828
ENSMUST00000149160.8	chr3	-	3222	4	FSM	ENSMUSG00000027829.16	ENSMUST00000149160.8	3222	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	34.7658836600865	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAAAAAGAATGAAGT	NA	False	NA	NA	False	AATATA	-4	NA	65865602	65856312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_65858976_65864273_65864384_65864921_65864997_65865228
ENSMUST00000149163.8	chr2	+	3603	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGTAAGGTTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	181138957	181159759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUST00000149163.8-0	chr2	+	990	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	34	2579	0	0	multi-exon	FALSE	canonical	3	669	junction_5	184.043805788132	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGCCATCCTTTCAA	NA	False	NA	36	True	CATAAA	-33	NA	181138991	181157180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUST00000149183.8	chr16	+	634	4	FSM	ENSMUSG00000022800.15	ENSMUST00000149183.8	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_2	35.0460015154685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTGCTGTGCCAGAGT	NA	False	NA	65	True	NA	NA	NA	32698182	32715626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454
ENSMUST00000149187.8	chr1	-	2091	12	FSM	ENSMUSG00000053483.16	ENSMUST00000149187.8	2091	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	157.150083551777	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	False	NA	NA	False	AATAAA	-7	NA	171115528	171109531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171109877_171110070_171110186_171110447_171110556_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ENSMUST00000149191.2	chr2	-	1697	2	FSM	ENSMUSG00000016252.8	ENSMUST00000149191.2	1697	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGGTTTTGTTTCTGTT	NA	False	NA	-7	True	AATAAA	-19	NA	174305842	174302867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174303015_174304292
ENSMUST00000149205.2	chr19	+	919	7	FSM	ENSMUSG00000032946.17	ENSMUST00000149205.2	919	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	53.7297765572209	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATCAGCCTAAAACCCT	NA	False	NA	20	True	AATAAA	-22	NA	6458434	6465241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
ENSMUST00000149243.8	chr9	+	2309	9	FSM	ENSMUSG00000032563.17	ENSMUST00000149243.8	2309	9	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	31.1879383736726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATGTCCTTTTTTGTG	NA	False	NA	NA	False	AATAAA	-2	NA	104930437	104953671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360
ENSMUST00000149246.8	chr12	-	3370	5	FSM	ENSMUSG00000073164.12	ENSMUST00000149246.8	3370	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.87082869338697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCC	NA	False	NA	NA	False	NA	NA	NA	23060285	23003999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_23004839_23008352_23010256_23042788_23042850_23043051_23043179_23059845
ENSMUST00000149248.9	chr8	+	2896	17	FSM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_8	27.3615120881504	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCATGTGTATTGCTT	NA	False	NA	20	True	AGTAAA	-20	NA	123791917	123824499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUST00000149267.8	chr8	+	1000	7	FSM	ENSMUSG00000038005.16	ENSMUST00000149267.8	1000	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	318.3514829032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGGCTCTTCTAGTGTT	NA	False	NA	15	True	AATAAA	-28	NA	61343478	61360607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_61343571_61346734_61346895_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUST00000149275.3	chr2	-	388	3	FSM	ENSMUSG00000087179.9	ENSMUST00000149275.3	388	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	59	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTATTATTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	156681812	156679741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156679834_156680337_156680457_156681635
ENSMUST00000149277.8	chr17	-	1388	12	FSM	ENSMUSG00000024426.18	ENSMUST00000149277.8	1388	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	38.3140567174602	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTACCGACAAAAAGTG	NA	False	NA	-15	True	AATAAA	-21	NA	36220949	36208503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUST00000149301.8	chr4	-	4615	42	FSM	ENSMUSG00000050812.19	ENSMUST00000149301.8	4615	42	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_41	32.1885433042191	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATCTGAAAAAGAAGAG	-1	True	NA	NA	False	NA	NA	NA	58911930	58811430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58911868
ENSMUST00000149313.8	chr2	-	1375	7	FSM	ENSMUSG00000027639.17	ENSMUST00000149313.8	1375	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	78.9887474405198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTTGTGTTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	156976857	156961483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156962312_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUST00000149328.8	chr16	+	545	3	FSM	ENSMUSG00000022884.17	ENSMUST00000149328.8	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_1	276.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCCATCCTGCAACAG	6072	False	NA	NA	False	NA	NA	NA	22926526	22927923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22926571_22927337_22927384_22927468
ENSMUST00000149330.8	chrX	+	479	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCAAAATAAATTCAT	NA	False	NA	40	True	TTTAAA	-31	NA	143100998	143107173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
ENSMUST00000149330.8-0	chrX	+	1479	4	FSM	ENSMUSG00000041718.17	ENSMUST00000149330.8	479	4	20	-1020	0	0	multi-exon	FALSE	canonical	3	125	junction_3	280.483313031077	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGCTGTTACTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	143101018	143108193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_143101118_143102998_143103058_143105007_143105147_143107011
ENSMUST00000149346.2	chr6	-	486	2	FSM	ENSMUSG00000030127.16	ENSMUST00000149346.2	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	1332	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGGTCTGTAAACTTA	NA	False	NA	NA	False	AATAAA	-33	NA	124942475	124941516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124941892_124942364
ENSMUST00000149384.8	chr5	-	1477	8	FSM	ENSMUSG00000029328.16	ENSMUST00000149384.8	1477	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_7	409.537668646996	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGTTCATTCTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	100186754	100183284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ENSMUST00000149384.8-0	chr5	-	2182	8	FSM	ENSMUSG00000029328.16	ENSMUST00000149384.8	1477	8	0	-705	0	0	multi-exon	FALSE	canonical	3	110	junction_7	409.537668646996	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186754	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
ENSMUST00000149389.8	chr11	+	1030	7	FSM	ENSMUSG00000025142.19	ENSMUST00000149389.8	1030	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	356.373711463433	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATGCTCAAACAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	120564217	120579953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120564628_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737
ENSMUST00000149390.2	chr2	+	2338	4	FSM	ENSMUSG00000068040.11	ENSMUST00000149390.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	29.0631496343164	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153044053	153052386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUST00000149415.2	chr6	-	3768	6	FSM	ENSMUSG00000002222.15	ENSMUST00000149415.2	3768	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	59.0748677527085	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGATACTCTCTGCT	NA	False	NA	NA	False	AATAAA	-27	NA	71376277	71365870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110
ENSMUST00000149427.8	chrX	+	2996	19	FSM	ENSMUSG00000041718.17	ENSMUST00000149427.8	2996	19	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	269.959970740977	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143122000	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ENSMUST00000149441.8	chr17	+	1701	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_1	98.0428973573416	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAGTACAGTTCATTTC	NA	False	NA	146	True	TTTAAA	-7	NA	56316200	56323790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ENSMUST00000149475.8	chr3	-	3629	3	FSM	ENSMUSG00000061175.13	ENSMUST00000149475.8	3629	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTCTGAAGTTTTCCTT	NA	False	NA	NA	False	TATAAA	-20	NA	79373512	79364193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_79367049_79369435_79369552_79372854
ENSMUST00000149485.2	chr10	-	1227	7	FSM	ENSMUSG00000019868.17	ENSMUST00000149485.2	753	7	-41	-433	0	0	multi-exon	FALSE	canonical	3	56	junction_1	226.315168637799	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTACCAGAATAG	NA	False	NA	-32	True	ATTAAA	-6	NA	14581244	14531098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUST00000149489.8	chr11	+	2894	5	FSM	ENSMUSG00000017221.15	ENSMUST00000149489.8	2894	5	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_3	42.2869660770314	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGAAATGATAAAA	NA	False	NA	NA	False	GATAAA	-8	NA	98573390	98583343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288
ENSMUST00000149498.2	chr4	+	383	3	FSM	ENSMUSG00000029062.15	ENSMUST00000149498.2	383	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	9	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTCTTTGCCCTCATT	3973	False	NA	NA	False	NA	NA	NA	155709336	155710153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155709399_155709641_155709797_155709987
ENSMUST00000149514.8	chrX	+	775	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTGACCCCTTTCTT	NA	False	NA	NA	False	AGTAAA	-20	NA	152506622	152512184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_152506934_152508700_152508838_152511857
ENSMUST00000149544.8	chr4	+	426	5	FSM	ENSMUSG00000042198.13	ENSMUST00000149544.8	426	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	158.419537936455	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAAGATGCCCTACTGA	NA	False	NA	-26	True	NA	NA	NA	3938889	3943472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_3938963_3939423_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUST00000149553.2	chr5	+	770	3	FSM	ENSMUSG00000029131.15	ENSMUST00000149553.2	770	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	23.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCACCACCATGTTGTAT	NA	False	NA	4	True	AATAAA	-12	NA	29959337	29962958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_29959590_29961231_29961337_29962545
ENSMUST00000149564.8	chr12	+	5763	30	FSM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_27	23.3199327353747	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTGTTTCTTAGAAG	NA	False	NA	22	True	AATAAA	-20	NA	71183621	71290077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ENSMUST00000149565.8	chr8	+	2837	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	2	7940	0	0	multi-exon	FALSE	canonical	3	636	junction_4	34.1778063804509	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTTGTTTTTTCAA	NA	False	NA	15	True	AATAAA	-25	NA	18896294	18933437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ENSMUST00000149566.2	chr1	-	838	6	FSM	ENSMUSG00000043716.14	ENSMUST00000149566.2	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	2771.11529893651	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGCAACAGGGAAGACC	NA	False	NA	NA	False	AAAAAG	-27	NA	16174451	16172003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174360
ENSMUST00000149582.8	chr15	-	4366	14	FSM	ENSMUSG00000042292.19	ENSMUST00000239114.2	4366	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	7.74138192332869	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTGTATTTGATCCAT	NA	False	NA	-3	True	AATAAA	-21	NA	81074958	80896481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
ENSMUST00000149595.8	chrX	+	837	6	FSM	ENSMUSG00000043384.16	ENSMUST00000149595.8	837	6	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	28.5629130167075	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATAGATTCTTCTCTC	NA	False	NA	NA	False	TTTAAA	-17	NA	134643481	134662739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134662477
ENSMUST00000149667.8	chr2	-	3896	4	FSM	ENSMUSG00000085385.8	ENSMUST00000149667.8	3896	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	13.8884444373331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8356	False	NA	-17	True	AATAAA	-12	NA	158203433	158197704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_158197962_158199117_158202520_158202862_158202991_158203324
ENSMUST00000149685.8	chrX	-	2804	6	FSM	ENSMUSG00000041096.14	ENSMUST00000149685.8	2804	6	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	17.9844377170931	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGGAGTCTTTTGTCC	NA	False	NA	-1	True	AATAAA	-20	NA	151125421	151119847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123377_151124535
ENSMUST00000149689.2	chr2	-	588	7	FSM	ENSMUSG00000078867.10	ENSMUST00000149689.2	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	128.500324253806	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCATGACTGTAACCA	NA	False	NA	NA	False	NA	NA	NA	177090113	177079693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177085086_177085189_177086489_177086545_177090016
ENSMUST00000149689.2-0	chr2	-	4167	7	FSM	ENSMUSG00000078867.10	ENSMUST00000149689.2	588	7	0	-3579	0	2802	multi-exon	FALSE	canonical	3	26	junction_4	128.500324253806	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090113	177076114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177085086_177085189_177086489_177086545_177090016
ENSMUST00000149697.3	chr2	+	694	4	FSM	ENSMUSG00000027429.17	ENSMUST00000149697.3	694	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	278.696968049529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTGTCATGTGTTTA	NA	False	NA	NA	False	NA	NA	NA	144398253	144406572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144398568_144401126_144401362_144404051_144404110_144406485
ENSMUST00000149699.8	chr17	+	2876	3	FSM	ENSMUSG00000044501.18	ENSMUST00000149699.8	2876	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	16	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTAGTCATTTATCTT	NA	False	NA	25	True	AATAAA	-25	NA	22580433	22596262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_22580689_22592623_22592751_22593768
ENSMUST00000149719.8	chr2	-	2145	9	FSM	ENSMUSG00000058835.15	ENSMUST00000149719.8	3303	9	11	1147	0	0	multi-exon	FALSE	canonical	3	21	junction_2	106.193220122567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGCCTCTCCT	NA	False	NA	-5	True	TATAAA	-31	NA	22930242	22831244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUST00000149720.3	chr2	+	2712	4	FSM	ENSMUSG00000009563.17	ENSMUST00000149720.3	2712	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	10.6562449087639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGACCAAAGTTTCTT	631	False	NA	7	True	AATAAA	-18	NA	32647287	32652254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUST00000149723.2	chr14	-	421	2	FSM	ENSMUSG00000037712.18	ENSMUST00000149723.2	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGACACACTGGACCTT	NA	False	NA	NA	False	NA	NA	NA	45767243	45742128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45742188_45766881
ENSMUST00000149730.2	chr2	+	931	3	FSM	ENSMUSG00000019715.15	ENSMUST00000149730.2	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5351	False	NA	NA	False	NA	NA	NA	29832736	29834776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29832779_29833736_29833850_29834000
ENSMUST00000149734.2	chr3	+	512	3	FSM	ENSMUSG00000027940.19	ENSMUST00000149734.2	512	3	0	0	0	0	multi-exon	FALSE	canonical	3	3261	junction_1	54.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCCAAGCTGGAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	89995367	89997349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89995784_89997103_89997167_89997316
ENSMUST00000149760.8	chr1	+	1040	5	FSM	ENSMUSG00000026349.15	ENSMUST00000149760.8	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_4	23.7539470404394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127701900	127723537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991
ENSMUST00000149764.8	chr11	-	867	3	FSM	ENSMUSG00000018761.15	ENSMUST00000149764.8	867	3	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_2	24	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGTAAGCACCCTCCA	6885	False	NA	NA	False	NA	NA	NA	69549106	69547954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69548155_69548245_69548357_69548550
ENSMUST00000149778.2	chr5	+	1475	3	FSM	ENSMUSG00000040532.15	ENSMUST00000149778.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_1	28.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038559	135041024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135038972_135039740_135040520_135040740
ENSMUST00000149780.2	chr11	+	676	2	FSM	ENSMUSG00000020894.17	ENSMUST00000149780.2	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGAGGCATGCCTT	NA	False	NA	NA	False	NA	NA	NA	68979347	68980501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68979454_68979931
ENSMUST00000149796.2	chr4	-	1803	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	False	NA	-13	True	ATTAAA	-22	NA	155170828	155158566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ENSMUST00000149796.2-0	chr4	-	1530	8	FSM	ENSMUSG00000029048.4	ENSMUST00000149796.2	1803	8	0	273	0	-273	multi-exon	FALSE	canonical	3	234	junction_7	582.015218259552	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGACTATTTTGAC	NA	False	NA	-33	True	TATAAA	-18	NA	155170828	155158839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167775_155170661
ENSMUST00000149802.2	chr15	-	2393	3	FSM	ENSMUSG00000041815.15	ENSMUST00000149802.2	2393	3	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_1	85	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAATTTCTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	83033530	83019888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83021756_83022332_83022724_83033395
ENSMUST00000149816.8	chr6	+	4903	15	FSM	ENSMUSG00000029772.18	ENSMUST00000149816.8	4903	15	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	11.049286614704	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGTCCTGAGAATACC	21	False	NA	8	True	AATAAA	-16	NA	29870287	29912308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_29870711_29871184_29871286_29878527_29878631_29880547_29880643_29883621_29883729_29886116_29886234_29890679_29890744_29891199_29891289_29894817_29894889_29896320_29896416_29903187_29903287_29906506_29906576_29906679_29906759_29908345_29908467_29909038
ENSMUST00000149822.3	chr11	+	600	2	FSM	ENSMUSG00000086859.5	ENSMUST00000149822.3	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCATTGTTCAAT	875	False	NA	20	True	AATAAA	-16	NA	116967608	116969781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116968029_116969601
ENSMUST00000149827.8	chr8	-	3041	12	FSM	ENSMUSG00000002949.16	ENSMUST00000149827.8	3041	12	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	34.7196564708602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325885	4309730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ENSMUST00000149837.2	chr4	+	729	2	FSM	ENSMUSG00000028729.16	ENSMUST00000149837.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	2534	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTCTTGGTCGCCGTT	NA	False	NA	NA	False	NA	NA	NA	118478046	118478859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118478195_118478278
ENSMUST00000149850.8	chr2	-	4459	24	FSM	ENSMUSG00000036281.14	ENSMUST00000149850.8	4459	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	20.3013218115665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGCAATGTATAGCC	NA	False	NA	-14	True	AATAAA	-20	NA	26270644	26252787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268172_26268292_26268505_26268649_26270560
ENSMUST00000149854.8	chr2	-	3612	19	FSM	ENSMUSG00000027346.16	ENSMUST00000149854.8	3612	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_15	20.2402239776804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTCCTGATTTGTT	NA	False	NA	0	True	NA	NA	NA	132420155	132371001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ENSMUST00000149857.3	chrX	+	770	4	FSM	ENSMUSG00000079435.10	ENSMUST00000149857.3	770	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	5569.45900025806	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTAAAAGCTTTCAGAAA	NA	False	NA	52	True	NA	NA	NA	133486449	133488782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133486933_133487260_133487328_133488199_133488323_133488685
ENSMUST00000149863.3	chrX	-	687	4	FSM	ENSMUSG00000090110.9	ENSMUST00000149863.3	507	4	0	-180	0	0	multi-exon	FALSE	canonical	3	61	junction_2	9.20144916122817	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460190	74448451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_74448825_74453151_74453220_74459620_74459820_74460143
ENSMUST00000149884.2	chr3	-	1552	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	40	336	0	0	multi-exon	FALSE	canonical	3	599	junction_3	50.1663898109747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTATTTTATTAT	NA	False	NA	-26	True	AATAAA	-23	NA	90398300	90395676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ENSMUST00000149911.2	chr2	-	1801	10	FSM	ENSMUSG00000027201.17	ENSMUST00000149911.2	1801	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	239.764236050519	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAGAATGAGAAGAGTGA	NA	False	NA	NA	False	NA	NA	NA	124965495	124941554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124955971_124957357_124957411_124958584_124958794_124965304
ENSMUST00000149916.2	chr17	-	687	3	FSM	ENSMUSG00000024118.15	ENSMUST00000149916.2	687	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	83	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCATCTGCTCATCACAC	3374	False	NA	NA	False	NA	NA	NA	24439727	24438754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24439285_24439495_24439590_24439664
ENSMUST00000149927.2	chr1	-	2703	2	FSM	ENSMUSG00000044768.17	ENSMUST00000149927.2	2703	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCGTGGTGTTTTA	NA	False	NA	-1	True	AATAAA	-18	NA	97589799	97571627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_97574087_97589555
ENSMUST00000149940.2	chr11	+	1752	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAAAATTTTTACTCT	3838	False	NA	8	True	AATAAA	-19	NA	75352364	75357502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75352582_75354518_75354684_75356132
ENSMUST00000149960.2	chrX	+	3976	19	FSM	ENSMUSG00000031066.11	ENSMUST00000149960.2	3976	19	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_8	33.2123731220017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTAGCTGTTTTGAGTG	NA	False	NA	1	True	NA	NA	NA	20578063	20586776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ENSMUST00000149978.2	chr2	+	3053	1	FSM	ENSMUSG00000074918.5	ENSMUST00000149978.2	3053	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGTAAGTTGGTCATT	NA	False	NA	4	True	AATACA	-20	NA	118576238	118579291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118576200_118579300
ENSMUST00000149985.8	chrX	+	1883	4	FSM	ENSMUSG00000031207.17	ENSMUST00000149985.8	1883	4	0	0	0	0	multi-exon	FALSE	canonical	3	1220	junction_3	48.6095555306659	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95139662	95197645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129
ENSMUST00000149992.2	chr8	-	2982	6	FSM	ENSMUSG00000031601.17	ENSMUST00000149992.2	2982	6	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	73.8495768437437	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGTGATTTCATA	NA	False	NA	NA	False	AATAAA	-6	NA	40964345	40946076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055
ENSMUST00000150004.2	chr15	-	721	2	FSM	ENSMUSG00000022387.18	ENSMUST00000150004.2	721	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTGAGCAGGTGAAATG	NA	False	NA	NA	False	AATGAA	-15	NA	88585067	88580248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_88580878_88584975
ENSMUST00000150006.9	chr14	-	3568	15	FSM	ENSMUSG00000048922.19	ENSMUST00000150006.9	3568	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	140.480734389787	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGGTAATCTGAGTTTC	NA	False	NA	-10	True	ATTAAA	-40	NA	67953290	67913779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67953200
ENSMUST00000150027.2	chr11	-	903	2	FSM	ENSMUSG00000025574.14	ENSMUST00000150027.2	903	2	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCAGCCCGCCTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	117716643	117715659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_117716459_117716539
ENSMUST00000150029.8	chr10	+	2462	19	FSM	ENSMUSG00000019854.18	ENSMUST00000150029.8	2462	19	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_9	47.5026964796685	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATTGTATTTGTTGG	NA	False	NA	14	True	AATAAA	-25	NA	17931751	18000892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ENSMUST00000150033.8	chr5	-	2112	7	FSM	ENSMUSG00000037339.18	ENSMUST00000150033.8	2112	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	74.8793473974411	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCTGCCTAGATTCT	NA	False	NA	-12	True	ATTAAA	-14	NA	33786932	33757699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33758225_33764807_33765572_33765674_33765834_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ENSMUST00000150042.8	chr7	-	923	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	-8	3370	0	116	multi-exon	FALSE	canonical	3	320	junction_4	76.5855530682877	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTTTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	100232317	100198327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ENSMUST00000150050.3	chr7	+	2090	3	FSM	ENSMUSG00000074365.14	ENSMUST00000150050.3	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	3	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATCTGTGCCTGCTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	15630095	15634223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_15630183_15631328_15631478_15632369
ENSMUST00000150091.8	chr2	-	2356	12	FSM	ENSMUSG00000026669.15	ENSMUST00000150091.8	2356	12	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_5	75.7261268056919	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	6372	False	NA	0	True	AATAAA	-38	NA	5006369	4995534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074
ENSMUST00000150095.8	chrX	-	2807	5	FSM	ENSMUSG00000039231.19	ENSMUST00000150095.8	2807	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	11.6054943884352	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGGAGATTGAGGTC	6992	False	NA	NA	False	NA	NA	NA	7940860	7927664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7929223_7929934_7930297_7936826_7937490_7938561_7938708_7940782
ENSMUST00000150103.3	chr17	+	1022	5	FSM	ENSMUSG00000037805.16	ENSMUST00000150103.3	1022	5	0	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_3	1550.72344004339	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGCCTTGGTGTGCCTGT	NA	False	NA	-4	True	AATAAA	-15	NA	28547573	28550002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28547593_28547784_28547860_28547940_28548497_28549498_28549672_28549803
ENSMUST00000150104.2	chr4	-	1582	3	FSM	ENSMUSG00000037752.5	ENSMUST00000150104.2	376	3	0	-1206	0	1206	multi-exon	FALSE	canonical	3	5	junction_2	21.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATGTACCACTAAGTG	4062	False	NA	-9	True	ATTAAA	-21	NA	132459839	132454610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132455882_132458186_132458384_132459725
ENSMUST00000150108.8	chr1	-	662	6	FSM	ENSMUSG00000013593.13	ENSMUST00000150108.8	662	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	600.927150326893	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTAATGTGTCTTTCTT	NA	False	NA	-1	True	ATTAAA	-28	NA	171065097	171062421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065038
ENSMUST00000150134.2	chr11	+	2029	3	FSM	ENSMUSG00000050860.7	ENSMUST00000150134.2	590	3	0	-1439	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGGACTTGTTCTCTTG	2197	False	NA	20	True	AATAAA	-16	NA	95715324	95722966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95715536_95719491_95719602_95721258
ENSMUST00000150137.2	chr17	-	657	5	FSM	ENSMUSG00000036438.15	ENSMUST00000150137.2	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	7049	junction_1	180.22954114129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGACTCTCAGGTCTACG	NA	False	NA	NA	False	TTTAAA	-37	NA	87754277	87742321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUST00000150152.2	chr16	-	520	2	FSM	ENSMUSG00000013539.15	ENSMUST00000150152.2	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCACTTTAGTCTCCCTG	NA	False	NA	NA	False	NA	NA	NA	18142315	18134173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18134599_18142220
ENSMUST00000150157.3	chr17	+	2110	3	FSM	ENSMUSG00000071172.14	ENSMUST00000150157.3	2110	3	0	0	0	0	multi-exon	FALSE	canonical	3	1932	junction_1	120.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGCCTGTTTTTCCTTG	NA	False	NA	37	True	ATTAAA	-28	NA	29258491	29261084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29259788_29260180_29260268_29260357
ENSMUST00000150161.8	chrX	+	3087	4	FSM	ENSMUSG00000034160.14	ENSMUST00000150161.8	3087	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	65.0743164901996	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTCTCTATGGGCCTG	NA	False	NA	NA	False	GATAAA	-44	NA	100683713	100698192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745
ENSMUST00000150204.8	chr4	-	935	7	FSM	ENSMUSG00000033379.14	ENSMUST00000150204.8	935	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	972.524449849748	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCAGTGAGGCTTCTGT	NA	False	NA	-8	True	AATAAA	-14	NA	117744517	117741529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117744366
ENSMUST00000150213.8	chr2	+	3643	6	FSM	ENSMUSG00000047909.12	ENSMUST00000150213.8	3643	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	23.5168025037419	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCTATTCAATTTTTT	4801	False	NA	37	True	AATAAA	-39	NA	11783334	11795140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_11783714_11784487_11784635_11786287_11788568_11789101_11789264_11791034_11791114_11794544
ENSMUST00000150226.8	chr5	+	995	6	FSM	ENSMUSG00000029310.14	ENSMUST00000150226.8	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	111.090953727115	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGAGCTCCCCCGGCAG	NA	False	NA	NA	False	NA	NA	NA	104194391	104207648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501
ENSMUST00000150267.2	chr18	+	3647	13	FSM	ENSMUSG00000024581.14	ENSMUST00000150267.2	1129	13	0	-2518	0	0	multi-exon	FALSE	canonical	2	11	junction_10	86.248671487353	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63110971	63132521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63125411_63125562_63127382_63127463_63128033_63128164_63129887
ENSMUST00000150268.8	chr3	+	1851	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	0	0	0	0	multi-exon	TRUE	canonical	3	670	junction_6	49.0312790627637	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGCATGTTGAGGATTG	NA	False	NA	7	True	AATAAA	-40	NA	82962828	82979662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUST00000150280.3	chr17	-	995	2	FSM	ENSMUSG00000024177.10	ENSMUST00000150280.3	995	2	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGAGAAGTGGGAATCT	NA	False	NA	NA	False	NA	NA	NA	26314459	26312370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26313245_26314338
ENSMUST00000150290.9	chr14	+	977	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	27	294	0	0	multi-exon	FALSE	canonical	3	42	junction_1	20.2286924935845	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACCCATCGCTTTGGGG	NA	False	NA	1	True	AATAAA	-14	NA	47611372	47623251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUST00000150319.2	chr6	-	2461	2	FSM	ENSMUSG00000032757.7	ENSMUST00000150319.2	2461	2	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAGAGAGAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	4086972	4080317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_4082583_4086776
ENSMUST00000150320.3	chr2	+	1919	2	FSM	ENSMUSG00000047909.12	ENSMUST00000150320.3	1919	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAGGATTAAAAAAA	4849	False	NA	NA	False	NA	NA	NA	11783382	11786075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_11783714_11784487
ENSMUST00000150324.8	chr17	-	1267	8	FSM	ENSMUSG00000061046.10	ENSMUST00000150324.8	1267	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	7.57277616039918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTGTGGTACCAGACAC	4588	False	NA	-37	True	AATAAA	-12	NA	26004312	26001798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977
ENSMUST00000150342.2	chr7	-	992	6	FSM	ENSMUSG00000008140.19	ENSMUST00000150342.2	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_1	39.9579779268171	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCCAGGAGGTCCAGGAG	NA	False	NA	NA	False	NA	NA	NA	44145887	44141158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUST00000150350.9	chr7	-	1047	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	0	0	0	0	multi-exon	FALSE	canonical	3	11064	junction_7	2170.0381732747	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGATGTGTGCTGTGCAGA	NA	False	NA	-1	True	AATAAA	-19	NA	44778185	44774981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000150371.8	chr14	-	2494	13	FSM	ENSMUSG00000022185.20	ENSMUST00000150371.8	2494	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	131.761437412047	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCATTTGAGTGCCTTTC	3757	False	NA	-6	True	AATAAA	-19	NA	54891139	54879623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
ENSMUST00000150372.2	chr4	+	708	5	FSM	ENSMUSG00000028837.9	ENSMUST00000150372.2	708	5	0	0	0	0	multi-exon	FALSE	canonical	3	3349	junction_3	124.252515065088	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTTATTCTCTCATGGG	5454	False	NA	NA	False	NA	NA	NA	126571496	126601555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346
ENSMUST00000150395.8	chr9	+	3425	23	FSM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	19.2294217582595	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACTGGACTGAAT	NA	False	NA	-3	True	AATAAA	-14	NA	22387017	22799570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUST00000150416.8	chr11	-	2338	4	FSM	ENSMUSG00000017677.12	ENSMUST00000150416.8	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	11.8977121983832	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	6239	False	NA	-24	True	ATTAAA	-12	NA	79133850	79130213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809
ENSMUST00000150419.2	chr2	+	851	2	FSM	ENSMUSG00000026810.13	ENSMUST00000150419.2	851	2	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCTGGGGAAAGACTGA	5962	False	NA	NA	False	NA	NA	NA	32462058	32463468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32462412_32462970
ENSMUST00000150431.8	chr7	-	1632	6	FSM	ENSMUSG00000030590.16	ENSMUST00000150431.8	1632	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	26.3210942021794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGATCTTGTTTCTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	28855608	28851936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28855456_28855554
ENSMUST00000150434.8	chrX	-	6419	41	FSM	ENSMUSG00000063663.12	ENSMUST00000150434.8	11619	41	8	5192	0	360	multi-exon	TRUE	canonical	2	5	junction_33	5.32822672190289	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGGTGCCAAATGCAAA	NA	False	NA	-17	True	ATTAAA	-26	NA	107877946	107785813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_107787377_107792888_107793048_107793836_107793935_107794294_107794459_107796423_107796577_107797845_107797918_107799021_107799163_107799951_107800009_107801125_107801205_107801289_107801416_107802454_107802576_107803211_107803368_107803476_107803539_107803904_107804017_107804841_107804925_107805678_107805804_107808735_107808844_107811554_107811669_107812491_107812658_107813344_107813422_107815126_107815277_107816916_107817011_107818432_107818617_107821852_107822021_107823501_107823728_107827717_107827847_107829252_107829388_107833338_107833493_107834750_107834856_107837907_107837949_107840351_107840453_107841634_107841706_107842360_107842462_107847587_107847810_107849042_107849204_107868411_107868511_107868950_107869102_107876819_107876880_107877282_107877313_107877513_107877573_107877704
ENSMUST00000150448.8	chr7	+	340	2	FSM	ENSMUSG00000040734.15	ENSMUST00000150448.8	340	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTCCACCCCCACCCA	697	False	NA	NA	False	NA	NA	NA	19093673	19095241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19093724_19094951
ENSMUST00000150459.3	chr10	+	1194	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTCTTAATTATTT	NA	False	NA	6	True	ATTAAA	-19	NA	83558728	83598626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ENSMUST00000150459.3-0	chr10	+	664	6	FSM	ENSMUSG00000087651.4	ENSMUST00000150459.3	1194	6	61	469	0	130	multi-exon	FALSE	canonical	3	89	junction_4	8.16333265278342	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGCCTCTTGTCTTCA	NA	False	NA	8	True	CATAAA	-18	NA	83558789	83598157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_83558899_83573772_83573798_83593308_83593345_83593997_83594078_83595456_83595495_83597781
ENSMUST00000150485.2	chr4	+	576	4	FSM	ENSMUSG00000028936.16	ENSMUST00000150485.2	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2633.7473092324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAACCGGTGGTTTATC	NA	False	NA	9	True	AATAAA	-8	NA	152411936	152416930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152412043_152413716_152413871_152414463_152414586_152416736
ENSMUST00000150490.3	chr11	+	1265	2	FSM	ENSMUSG00000078706.5	ENSMUST00000150490.3	3257	2	-474	2466	65	539	multi-exon	FALSE	canonical	3	27	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTGTGTGTGTGTGTGT	8340	False	NA	NA	False	NA	NA	NA	96141995	96153058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96142640_96152437
ENSMUST00000150504.3	chr11	-	749	3	FSM	ENSMUSG00000020831.19	ENSMUST00000150504.3	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	64	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTGGCCACTCAGT	NA	False	NA	NA	False	NA	NA	NA	70128738	70127279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70127805_70128356_70128452_70128609
ENSMUST00000150525.8	chr3	+	2701	15	FSM	ENSMUSG00000063052.10	ENSMUST00000150525.8	2701	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	284.951275820686	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_157742514_157746077_157746260_157747499_157747571_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUST00000150529.2	chr4	+	545	3	FSM	ENSMUSG00000085101.8	ENSMUST00000150529.2	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCATACAGGAGAGAA	NA	False	NA	67	True	NA	NA	NA	145136835	145176326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145136997_145138756_145138851_145176036
ENSMUST00000150545.8	chr2	-	1299	5	FSM	ENSMUSG00000027472.15	ENSMUST00000150545.8	1299	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	103.576964137785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGTTGTCACCCACC	8639	False	NA	NA	False	AATAAA	-21	NA	152857347	152850809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857127
ENSMUST00000150571.2	chr2	+	2151	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_7	28.1497453499193	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGTATTATTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	166857229	166867733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
ENSMUST00000150576.8	chr9	+	733	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	2142	junction_1	1217.38161642108	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306652	106308767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
ENSMUST00000150585.8	chr7	+	2554	23	FSM	ENSMUSG00000030534.14	ENSMUST00000150585.8	2554	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	27.6695375058045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTTTGTTTTTT	NA	False	NA	11	True	AATAAA	-15	NA	79919426	79941321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ENSMUST00000150593.8	chr1	+	1966	4	FSM	ENSMUSG00000004768.15	ENSMUST00000150593.8	1966	4	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_2	15.5777619273972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCTTTTCCTTTCTTT	NA	False	NA	8	True	TATAAA	-18	NA	33773608	33779792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUST00000150619.9	chr4	-	4542	16	FSM	ENSMUSG00000028809.17	ENSMUST00000150619.9	4542	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_10	331.446660699559	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAGAAGAAGAA	NA	False	NA	-69	True	NA	NA	NA	135080445	135049786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
ENSMUST00000150627.11	chr19	+	1472	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATCTGAGCTCACAGCA	4371	False	NA	NA	False	AATAAA	-30	NA	4175959	4182306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUST00000150627.11-0	chr19	+	892	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	0	580	0	0	multi-exon	FALSE	canonical	3	226	junction_4	186.716255318063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4371	False	NA	NA	False	AATAAA	-16	NA	4175959	4181726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUST00000150639.2	chr12	+	3761	4	FSM	ENSMUSG00000044548.12	ENSMUST00000150639.2	2448	4	-100	-1213	0	0	multi-exon	FALSE	canonical	2	11	junction_3	8.28653526310404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGTGTTATTTTTGAGA	1213	False	NA	NA	False	TATAAA	-36	NA	71356657	71366881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71357082_71359459_71359593_71360558_71360715_71363833
ENSMUST00000150650.2	chr2	-	310	3	FSM	ENSMUSG00000095362.8	ENSMUST00000150650.2	310	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	213.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAATTCCTATGAAGA	NA	False	NA	NA	False	NA	NA	NA	177482129	177476021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_177476105_177476312_177476440_177482029
ENSMUST00000150709.8	chr5	-	5185	11	FSM	ENSMUSG00000029173.13	ENSMUST00000150709.8	5185	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	24.1412510032103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAAGTCTTCTTGCACT	NA	False	NA	24	True	AATAAA	-41	NA	52827050	52797428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826307_52826396_52826916
ENSMUST00000150722.2	chr5	-	2815	3	FSM	ENSMUSG00000036285.11	ENSMUST00000150722.2	2815	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	77457906	77452826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_77454324_77455399_77455565_77456753
ENSMUST00000150727.8	chr14	+	1523	6	FSM	ENSMUSG00000058317.13	ENSMUST00000150727.8	1523	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	30.1569229199532	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTCTGTACCAGCCTTT	NA	False	NA	7	True	AATAAA	-19	NA	3575919	3896119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_3576112_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
ENSMUST00000150728.8	chr17	+	2490	7	FSM	ENSMUSG00000073468.13	ENSMUST00000150728.8	2490	7	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_6	38.5947607267561	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2923	False	NA	NA	False	AATAAA	-19	NA	8529933	8546274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8542168_8543265_8543296_8545786
ENSMUST00000150739.2	chr11	-	928	5	FSM	ENSMUSG00000020460.16	ENSMUST00000150739.2	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	7569	junction_4	3562.36217277244	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACCAGAAGACAAGTAGT	NA	False	NA	-84	True	NA	NA	NA	29497882	29495898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_29496030_29496290_29496423_29496702_29497261_29497680_29497746_29497840
ENSMUST00000150749.2	chr1	-	711	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAACAGTGCTACCTATGT	7927	False	NA	-16	True	AATAAA	-21	NA	64729818	64719029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_64719545_64729622
ENSMUST00000150757.8	chr2	+	1825	4	FSM	ENSMUSG00000027569.16	ENSMUST00000150757.8	1825	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	3.55902608401044	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATCTTGGAAGTTGTATG	NA	False	NA	NA	False	ATTAAA	-20	NA	180224515	180228097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_180224749_180225193_180225316_180226198_180226665_180227093
ENSMUST00000150767.8	chr15	-	3896	10	FSM	ENSMUSG00000035891.17	ENSMUST00000150767.8	3896	10	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	3.68178700572909	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCTCCCCTCATCCTCA	7623	False	NA	-13	True	AATAAA	-18	NA	86043669	86023328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294
ENSMUST00000150768.8	chr14	+	2994	12	FSM	ENSMUSG00000034327.18	ENSMUST00000150768.8	1302	12	0	-1692	0	0	multi-exon	FALSE	canonical	3	52	junction_9	22.4881970879051	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTTCTGCTCTTGCT	NA	False	NA	10	True	AATAAA	-22	NA	67953710	67979610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
ENSMUST00000150779.8	chr5	+	3133	15	FSM	ENSMUSG00000054256.12	ENSMUST00000150779.8	3133	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	14.3358050392173	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	2389	False	NA	15	True	AATAAA	-15	NA	115567657	115593757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588845_115589034_115589515_115589580_115591884
ENSMUST00000150806.8	chr13	-	3772	11	FSM	ENSMUSG00000034928.17	ENSMUST00000150806.8	3772	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_10	208.151603404826	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGCTGCCCAAGCTGC	NA	False	NA	-20	True	AATAAA	-13	NA	54836001	54827226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54835843
ENSMUST00000150810.8	chr5	+	1120	4	FSM	ENSMUSG00000029177.10	ENSMUST00000150810.8	1120	4	0	0	0	0	multi-exon	FALSE	canonical	3	1270	junction_1	232.020592955788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGGCAGTCCCGCCATA	9224	False	NA	40	True	AATAAA	-24	NA	30824278	30831753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30824458_30829807_30829915_30830325_30830788_30831381
ENSMUST00000150821.8	chr1	-	7676	8	FSM	ENSMUSG00000026667.15	ENSMUST00000150821.8	7676	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	38.1126150843973	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTCTTATTTCTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	170042303	170020988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042066
ENSMUST00000150826.9	chr9	+	2939	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	12.4638252063927	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACTGCTTTCTGATGTC	NA	False	NA	NA	False	NA	NA	NA	72892859	72921220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUST00000150835.2	chr2	-	416	2	FSM	ENSMUSG00000027404.17	ENSMUST00000150835.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	3	3369	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGTGGAAGAGGTGAGG	NA	False	NA	NA	False	NA	NA	NA	130021254	130018771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130019087_130021153
ENSMUST00000150838.2	chr5	+	2167	10	FSM	ENSMUSG00000007207.11	ENSMUST00000150838.2	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	7.53428378140653	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCTCTGTTTGGAACA	NA	False	NA	15	True	AATAAA	-15	NA	135052413	135079954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450_135074589_135077764_135077959_135078680
ENSMUST00000150843.9	chr2	+	4266	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	869	False	NA	5	True	AATAAA	-19	NA	131104419	131141108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ENSMUST00000150843.9-0	chr2	+	1774	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	-5	2497	0	0	multi-exon	FALSE	canonical	3	323	junction_2	97.0093065409477	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	864	False	NA	13	True	NA	NA	NA	131104414	131138611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ENSMUST00000150848.8	chr17	+	5418	32	FSM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	0	0	0	0	multi-exon	FALSE	canonical	1	133	junction_20	64.7559574638129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGAGAGGTCTGCCCTT	NA	False	NA	NA	False	AATGAA	-16	NA	13980935	14124269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ENSMUST00000150848.8-0	chr17	+	7341	32	FSM	ENSMUSG00000068036.17	ENSMUST00000150848.8	5418	32	-135	-1788	0	0	multi-exon	FALSE	canonical	1	133	junction_20	64.7559574638129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ENSMUST00000150863.9	chr11	+	3453	27	FSM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_14	12.2793543958426	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTTCTTTTTACATT	NA	False	NA	NA	False	ATTAAA	-18	NA	108316017	108751441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ENSMUST00000150876.2	chr2	-	562	5	FSM	ENSMUSG00000039128.14	ENSMUST00000150876.2	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_1	96.4507646418627	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTCTCAGTTGAGCAAG	NA	False	NA	NA	False	TTTAAA	-5	NA	5849662	5827626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUST00000150911.8	chr1	-	960	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	82.045353311446	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACGGTTGGTTAATTTGA	NA	False	NA	NA	False	AATAAA	-1	NA	44141601	44126020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
ENSMUST00000150923.8	chr3	-	2316	8	FSM	ENSMUSG00000027752.16	ENSMUST00000150923.8	2316	8	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_7	192.173603487969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642458	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUST00000150925.8	chr16	-	941	5	FSM	ENSMUSG00000003528.16	ENSMUST00000150925.8	941	5	0	0	0	0	multi-exon	FALSE	canonical	3	1746	junction_1	103.183089699815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTTTGGAGCTACTGCG	NA	False	NA	NA	False	NA	NA	NA	17745751	17744129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408
ENSMUST00000150955.2	chr11	-	480	2	FSM	ENSMUSG00000071415.7	ENSMUST00000150955.2	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	13439	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAAAGTCTCTGCTCTG	NA	False	NA	-53	True	AATATA	-2	NA	97669461	97668881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97668991_97669090
ENSMUST00000150975.8	chr14	+	1775	5	FSM	ENSMUSG00000022194.16	ENSMUST00000150975.8	1775	5	0	0	0	0	multi-exon	FALSE	canonical	3	2245	junction_1	156.472641378613	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGGAAAAAAAAAAGA	NA	False	NA	37	True	AAAAAG	-35	NA	55131611	55135553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408
ENSMUST00000150990.9	chr18	+	1576	7	FSM	ENSMUSG00000025421.16	ENSMUST00000150990.9	3126	7	53	1497	0	0	multi-exon	FALSE	canonical	0	0	junction_2	156.505235979148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAATTAGACATTGTT	NA	False	NA	19	True	NA	NA	NA	77032132	77059101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77032228_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUST00000150995.8	chr15	-	850	4	FSM	ENSMUSG00000064284.13	ENSMUST00000150995.8	566	4	1	-285	0	0	multi-exon	FALSE	canonical	3	9	junction_3	150.534602888062	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8086	False	NA	0	True	ATTAAA	-15	NA	85695897	85691172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695839
ENSMUST00000151012.3	chr4	-	2647	8	FSM	ENSMUSG00000040550.18	ENSMUST00000151012.3	2647	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	152.637492385169	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGAAGTAATGTTATC	23	True	NA	-2	True	AATAAA	-12	NA	14826395	14810045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14819094_14819216_14822691_14822773_14825498_14825654_14826290
ENSMUST00000151017.2	chr1	-	1229	2	FSM	ENSMUSG00000043716.14	ENSMUST00000151017.2	1229	2	0	0	0	0	multi-exon	FALSE	canonical	3	6432	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCAAGTGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	16173072	16171751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16172824_16172915
ENSMUST00000151020.8	chrX	+	3316	12	FSM	ENSMUSG00000000881.13	ENSMUST00000151020.8	3316	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	11.5078126534158	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGGCTCAGAGGTCTT	699	False	NA	NA	False	AATAAA	-15	NA	99820890	99862014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_99820979_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ENSMUST00000151067.8	chrX	-	461	3	FSM	ENSMUSG00000041353.13	ENSMUST00000151067.8	864	3	4	399	0	-148	multi-exon	FALSE	canonical	0	0	junction_2	131	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAAAGCAGTCTTGGCTTT	NA	False	NA	NA	False	TATAAA	-16	NA	149242146	149192314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149192597_149203337_149203438_149242067
ENSMUST00000151068.8	chr1	-	2821	11	FSM	ENSMUSG00000026277.15	ENSMUST00000151068.8	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	14.8354305633507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGTACAGAGCCTGGC	NA	False	NA	-36	True	AATAAA	-19	NA	93563351	93549623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ENSMUST00000151075.2	chr9	-	785	2	FSM	ENSMUSG00000031969.17	ENSMUST00000151075.2	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCCTGATTAAACAGGTA	7744	False	NA	NA	False	AATGAA	-3	NA	26889251	26886671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_26887057_26888851
ENSMUST00000151078.8	chr2	-	2107	7	FSM	ENSMUSG00000005882.19	ENSMUST00000151078.8	2107	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	152.646286849333	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTCCTGGAATGGATG	NA	False	NA	-33	True	AATAAA	-18	NA	155771956	155688815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155763554_155763648_155771932
ENSMUST00000151118.2	chr11	-	728	5	FSM	ENSMUSG00000071415.7	ENSMUST00000151118.2	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	6071.74712809254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTGGTCTTCTTGAC	NA	False	NA	-35	True	ATTAAA	-11	NA	97673102	97668863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97672828
ENSMUST00000151119.9	chr7	+	2397	11	FSM	ENSMUSG00000040268.18	ENSMUST00000151119.9	2397	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	25.6961086548139	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAACCATA	NA	False	NA	NA	False	NA	NA	NA	130467632	130511551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ENSMUST00000151120.9	chr7	-	2127	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	0	0	0	0	multi-exon	FALSE	canonical	3	1941	junction_4	107.727593377927	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGCTCTGTACTGT	8684	False	NA	-2	True	AATAAA	-23	NA	141941775	141929647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUST00000151130.8	chr2	-	1539	6	FSM	ENSMUSG00000033256.15	ENSMUST00000151130.8	1539	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	39.8216021777125	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCCCGCCCCAGTCAG	NA	False	NA	21	True	NA	NA	NA	122199618	122179608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_122180021_122184245_122184366_122184511_122184679_122187563_122187771_122189928_122190071_122199127
ENSMUST00000151131.8	chr2	-	1353	3	FSM	ENSMUSG00000026956.16	ENSMUST00000151131.8	1353	3	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTCTGTCTATTT	1662	False	NA	-16	True	NA	NA	NA	25253710	25251501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25251752_25252082_25252150_25252674
ENSMUST00000151145.8	chr2	-	723	6	FSM	ENSMUSG00000026860.17	ENSMUST00000151145.8	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	125.735595596474	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCCCACTCCCTGTCA	NA	False	NA	NA	False	NA	NA	NA	30249257	30239494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30239617_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUST00000151155.8	chr17	-	1924	5	FSM	ENSMUSG00000024150.13	ENSMUST00000151155.8	603	5	-9	-1312	0	0	multi-exon	FALSE	canonical	3	42	junction_4	129.331695651143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGACGTTGACTC	NA	False	NA	-2	True	AATAAA	-17	NA	87573332	87562085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87566177_87566310_87573262
ENSMUST00000151163.2	chr2	+	746	4	FSM	ENSMUSG00000027162.8	ENSMUST00000151163.2	746	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	18.4932420089069	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTGAGAGAATCCCAGG	NA	False	NA	NA	False	NA	NA	NA	109721214	109727083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580
ENSMUST00000151168.2	chr8	+	2855	4	FSM	ENSMUSG00000052446.18	ENSMUST00000151168.2	698	4	0	-2157	0	0	multi-exon	FALSE	canonical	3	39	junction_1	148.102066907327	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72707290	72724177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72707523_72719637_72719765_72719943_72720005_72721742
ENSMUST00000151177.2	chr7	-	4731	13	FSM	ENSMUSG00000041328.17	ENSMUST00000151177.2	4731	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	60.3081784577257	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCCATGGAGTGTAATAT	NA	False	NA	-6	True	NA	NA	NA	92312745	92293467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92308612_92309097_92309207_92309389_92310166_92311285_92312669
ENSMUST00000151189.2	chr18	-	1348	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	23	1267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGATTAACTGTAGCC	NA	False	NA	NA	False	AATAAA	-21	NA	46730602	46721098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46721756_46726315_46726562_46730157
ENSMUST00000151191.8	chr4	-	1710	6	FSM	ENSMUSG00000042558.17	ENSMUST00000151191.8	1710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	135.766858989961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTCCTGTTCCTGTCTC	7410	False	NA	NA	False	AATAAA	-20	NA	126215162	126209839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126214862
ENSMUST00000151200.8	chrX	+	1001	5	FSM	ENSMUSG00000025260.11	ENSMUST00000151200.8	1001	5	0	0	0	0	multi-exon	FALSE	canonical	3	1649	junction_4	99.7180399927716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGCAGTCTTGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	150785144	150787438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ENSMUST00000151230.2	chr2	+	677	3	FSM	ENSMUSG00000051154.12	ENSMUST00000151230.2	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_2	14	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATTTGAATGAAATTAA	2286	False	NA	NA	False	AATAAA	-16	NA	18679459	18680312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_18679528_18679619_18679677_18679760
ENSMUST00000151231.10	chrX	+	1940	6	FSM	ENSMUSG00000046774.18	ENSMUST00000151231.10	1940	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	112.716280989039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841947_100841990_100842072
ENSMUST00000151238.8	chr4	-	600	5	FSM	ENSMUSG00000028470.11	ENSMUST00000151238.8	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	305.186316043167	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATCCCTGTCTTAAA	11	True	NA	-5	True	AATAAA	-16	NA	43656443	43654226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_43654423_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ENSMUST00000151240.2	chr2	-	5536	2	FSM	ENSMUSG00000078903.11	ENSMUST00000151240.2	5536	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATGGAGTTAATAAATAC	NA	False	NA	NA	False	NA	NA	NA	175048669	175039466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_175044907_175048573
ENSMUST00000151242.8	chr10	+	1657	12	FSM	ENSMUSG00000000730.14	ENSMUST00000151242.8	1657	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	3.67029622512479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTAGTGTTCTGGTGTGG	5708	False	NA	23	True	AATATA	-15	NA	77885792	77899450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77886038_77886431_77886519_77886749_77886795_77887664_77887745_77887825_77887939_77888545_77888718_77889762_77889851_77890805_77890901_77892678_77892755_77893101_77893242_77895480_77895567_77899020
ENSMUST00000151257.2	chr2	+	1734	4	FSM	ENSMUSG00000027132.4	ENSMUST00000151257.2	1734	4	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	36.4264860903284	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	112209570	112237863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418
ENSMUST00000151266.8	chr16	+	1086	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	38.8546972707291	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTCCTAGTGACTCT	NA	False	NA	30	True	AATAAA	-36	NA	17884266	17889227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
ENSMUST00000151273.8	chr10	+	5297	20	FSM	ENSMUSG00000035311.17	ENSMUST00000151273.8	5297	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.8253838534801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGAGTTTATTGTT	NA	False	NA	13	True	CATAAA	-15	NA	88215085	88283182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_88215398_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ENSMUST00000151280.8	chr4	-	4680	7	FSM	ENSMUSG00000028497.13	ENSMUST00000151280.8	4680	7	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	2.26691175145591	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGCTGAGCTTTTATG	NA	False	NA	NA	False	ATTAAA	-20	NA	88357165	88328577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696_88355801_88357069
ENSMUST00000151287.8	chr17	+	2446	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCAAGTGCTGGAATT	NA	False	NA	20	True	NA	NA	NA	13135268	13143954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUST00000151287.8-0	chr17	+	1881	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	60	505	0	0	multi-exon	FALSE	canonical	3	3235	junction_8	179.622239047203	3568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCCTGTCCTCAGTTT	NA	False	NA	5	True	ATTAAA	-20	NA	13135328	13143449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUST00000151288.8	chr15	-	7509	8	FSM	ENSMUSG00000079020.10	ENSMUST00000151288.8	7509	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	102.455166899917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGACAGTGTGGTCTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	73496593	73449272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73496174
ENSMUST00000151289.9	chr19	-	3262	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	43.4069118920017	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTATTATATTGTGT	8019	False	NA	-2	True	AATAAA	-17	NA	32188413	32100127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ENSMUST00000151304.8	chr7	+	2782	12	FSM	ENSMUSG00000030727.13	ENSMUST00000151304.8	2782	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	15.3730471446749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTGCCTTGTGCCTGC	NA	False	NA	12	True	AATAAA	-15	NA	126027930	126045073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126044109_126044468
ENSMUST00000151338.8	chr1	-	1538	11	FSM	ENSMUSG00000026034.18	ENSMUST00000151338.8	1538	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	69.2961759406679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463225	58451158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456425_58456543_58458825_58458893_58460241_58460468_58460932_58461094_58463078
ENSMUST00000151361.2	chr5	-	1453	9	FSM	ENSMUSG00000029598.13	ENSMUST00000151361.2	1453	9	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_4	35.3685948264841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGTCTTGTGACCTTCA	NA	False	NA	NA	False	NA	NA	NA	120641677	120625363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ENSMUST00000151365.8	chr2	-	1846	5	FSM	ENSMUSG00000078923.11	ENSMUST00000151365.8	924	5	0	-922	0	0	multi-exon	FALSE	canonical	3	48	junction_4	1117.10764924424	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGTGGTTTTATTTTAA	9426	False	NA	NA	False	AATAAA	-22	NA	167473907	167449763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167471089_167471209_167473859
ENSMUST00000151372.8	chr4	+	4950	6	FSM	ENSMUSG00000039662.17	ENSMUST00000151372.8	4950	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	50.2274825170444	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGAGGAGTCCTGTATCA	4612	False	NA	2	True	AATAAA	-17	NA	152381760	152391577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152382026_152383141_152383231_152383593_152383703_152384127_152384298_152384993_152385212_152387478
ENSMUST00000151390.8	chr10	+	1690	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	0	1812	0	108	multi-exon	FALSE	canonical	0	0	junction_9	366.010456573289	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTTTTCTCTGAGGAGTC	NA	False	NA	NA	False	AAGAAA	-1	NA	82465692	82484821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUST00000151396.2	chr11	-	997	4	FSM	ENSMUSG00000018727.20	ENSMUST00000151396.2	997	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	55.7195357721748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATCGAACCACATGTCCA	NA	False	NA	NA	False	NA	NA	NA	113600350	113593537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113594193_113597242_113597396_113599629_113599681_113600212
ENSMUST00000151450.8	chr5	-	2155	11	FSM	ENSMUSG00000056413.17	ENSMUST00000151450.8	2155	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	87.7886666945113	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTTATGGCT	NA	False	NA	-5	True	AATAAA	-20	NA	139292074	139257630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260568_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139288783_139288816_139292035
ENSMUST00000151453.2	chr11	-	510	2	FSM	ENSMUSG00000032633.13	ENSMUST00000151453.2	510	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGACTTCCGTGGAGATC	NA	False	NA	NA	False	NA	NA	NA	59700537	59699853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59700312_59700485
ENSMUST00000151477.8	chr5	-	6487	16	FSM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	42.8710728684143	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	142803417	142740543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ENSMUST00000151481.8	chr4	-	1716	4	FSM	ENSMUSG00000028492.14	ENSMUST00000151481.8	1716	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAAGGAAAATGACACA	NA	False	NA	NA	False	NA	NA	NA	86457354	86362877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86364055_86397109_86397316_86405976_86406157_86457201
ENSMUST00000151513.2	chr11	+	503	3	FSM	ENSMUSG00000035530.14	ENSMUST00000151513.2	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	6060.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGTAATTCAGCTACA	4281	False	NA	NA	False	NA	NA	NA	100211034	100211815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100211332_100211491_100211656_100211773
ENSMUST00000151524.9	chr13	-	3747	21	FSM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_14	27.7961777947976	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	-2	True	AATAAA	-22	NA	77283592	77191206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ENSMUST00000151559.2	chr11	-	510	3	FSM	ENSMUSG00000059534.9	ENSMUST00000151559.2	510	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	31	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGGCTTTTGCACGAGTC	NA	False	NA	-8	True	AATAAA	-17	NA	4654334	4651974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4652221_4653903_4653990_4654156
ENSMUST00000151563.2	chr1	+	1940	11	FSM	ENSMUSG00000006005.19	ENSMUST00000151563.2	1940	11	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_5	47.5032630458161	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGTTTGGCTTGC	NA	False	NA	18	True	AATAAA	-19	NA	150305114	150316066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817
ENSMUST00000151608.2	chr11	+	764	5	FSM	ENSMUSG00000018449.13	ENSMUST00000151608.2	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	58.7047698232435	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAGCCTGGATGTAAGA	NA	False	NA	NA	False	NA	NA	NA	70861354	70865255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894
ENSMUST00000151609.2	chr17	+	1853	10	FSM	ENSMUSG00000023873.14	ENSMUST00000151609.2	1853	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	3.01027048536535	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTGCGTGCTCACTGC	NA	False	NA	NA	False	AATAAA	-18	NA	9207188	9227150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_9207254_9210877_9211585_9212427_9212551_9214029_9214090_9215810_9215936_9219959_9220019_9220601_9220778_9224023_9224078_9224524_9224587_9226728
ENSMUST00000151612.2	chr11	+	2752	12	FSM	ENSMUSG00000039908.15	ENSMUST00000151612.2	2752	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	12.5289746831722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATACAATATTCTG	NA	False	NA	NA	False	ATTAAA	-45	NA	119253474	119271875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ENSMUST00000151620.9	chr17	+	2539	13	FSM	ENSMUSG00000042345.16	ENSMUST00000151620.9	2539	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6.05300659911163	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACCTTATGATTCTATT	NA	False	NA	NA	False	NA	NA	NA	31431086	31461064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31431206_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
ENSMUST00000151624.2	chr9	+	1112	7	FSM	ENSMUSG00000032076.21	ENSMUST00000151624.2	1112	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	18.6904610251682	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCAGTTGGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	47441670	47725352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070
ENSMUST00000151644.8	chr7	+	1391	11	FSM	ENSMUSG00000025487.16	ENSMUST00000151644.8	1391	11	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_10	119.9970416302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTGAAATTGCTGCTCC	NA	False	NA	NA	False	NA	NA	NA	140462326	140477825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329
ENSMUST00000151658.8	chr9	-	2240	11	FSM	ENSMUSG00000039048.16	ENSMUST00000151658.8	2240	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	63.8767563359318	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122297	35115503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121235_35121462_35122102
ENSMUST00000151702.8	chrX	+	648	7	FSM	ENSMUSG00000008682.14	ENSMUST00000151702.8	648	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	3469.80780767786	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTGGTCCTCTGGACAA	NA	False	NA	-98	True	AATATA	-6	NA	73314462	73316631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73314485_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUST00000151715.2	chr17	+	578	4	FSM	ENSMUSG00000068039.14	ENSMUST00000151715.2	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	3521	junction_2	113.03785010144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACTAAGCTCCG	NA	False	NA	NA	False	NA	NA	NA	13135361	13138445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237
ENSMUST00000151728.2	chr4	-	2238	3	FSM	ENSMUSG00000043962.17	ENSMUST00000151728.2	2238	3	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_2	228	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTATCCTAAATAACTT	6822	False	NA	NA	False	AGTAAA	-12	NA	126096405	126072566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126074608_126080227_126080382_126096362
ENSMUST00000151747.8	chr10	-	1952	11	FSM	ENSMUSG00000038302.15	ENSMUST00000151747.8	1952	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.3914197642047	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCTTGTCTGATTCATT	NA	False	NA	1	True	AATAAA	-18	NA	42354276	42188580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42354258
ENSMUST00000151786.8	chr5	-	3893	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTTTTGGTTAGTGTTT	NA	False	NA	-3	True	NA	NA	NA	136227817	136206980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ENSMUST00000151786.8-0	chr5	-	883	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	53	2957	0	0	multi-exon	FALSE	canonical	3	446	junction_2	42.6164287569946	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTTGTCCACACGTGCG	NA	False	NA	-13	True	AGTAAA	-16	NA	136227764	136209937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ENSMUST00000151797.3	chr17	-	1799	5	FSM	ENSMUSG00000024114.16	ENSMUST00000151797.3	1799	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4.71036092035419	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGGATGCCTTTAA	NA	False	NA	-6	True	NA	NA	NA	24063146	24060025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24061500_24062415_24062585_24062812_24062846_24062930_24062958_24063050
ENSMUST00000151799.8	chr2	-	1303	3	FSM	ENSMUSG00000050896.13	ENSMUST00000151799.8	1303	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCCTTGGCCCCGCTC	NA	False	NA	NA	False	NA	NA	NA	84717054	84702267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84703040_84710731_84711214_84717005
ENSMUST00000151801.2	chr2	+	3328	2	FSM	ENSMUSG00000027654.3	ENSMUST00000151801.2	3328	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	8943	False	NA	8	True	AATAAA	-16	NA	158623327	158628557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_158625178_158627079
ENSMUST00000151826.2	chr2	+	1600	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	0	2826	0	764	multi-exon	FALSE	canonical	3	131	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGCTAAGACATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	166635686	166638599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166635989_166637301
ENSMUST00000151838.8	chr4	-	744	6	FSM	ENSMUSG00000028795.16	ENSMUST00000151838.8	744	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	33.5535393066067	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTACTCGGTGCTCTCCTT	NA	False	NA	-4	True	ATTAAA	-14	NA	129517630	129513068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129513240_129514249_129514273_129514475_129514647_129514776_129514944_129516392_129516581_129517606
ENSMUST00000151861.9	chr9	-	1668	3	FSM	ENSMUSG00000066892.15	ENSMUST00000151861.9	1668	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTTGCACTTATTTAA	NA	False	NA	-2	True	ATTAAA	-20	NA	20556051	20549082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20550495_20553319_20553393_20555868
ENSMUST00000151880.8	chr11	+	1662	16	FSM	ENSMUSG00000020409.11	ENSMUST00000151880.8	1662	16	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	64.5679659136187	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAGAAGAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	43324570	43336212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185
ENSMUST00000151887.9	chr1	+	2259	3	FSM	ENSMUSG00000026199.18	ENSMUST00000151887.9	2259	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	5.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGATGACACAGACTCCA	35	False	NA	NA	False	NA	NA	NA	75168794	75171728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75170929_75171484_75171588_75171706
ENSMUST00000151890.3	chr7	-	1753	6	FSM	ENSMUSG00000025139.15	ENSMUST00000151890.3	1753	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	117.621426619473	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGCAGTATACTCT	4013	False	NA	NA	False	ACTAAA	-20	NA	141472244	141437215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141472171
ENSMUST00000151908.8	chr7	+	1918	3	FSM	ENSMUSG00000030815.12	ENSMUST00000151908.8	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	14	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127172575	127178458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127172629_127173025_127173139_127176706
ENSMUST00000151928.8	chr10	+	1698	9	FSM	ENSMUSG00000020211.16	ENSMUST00000151928.8	781	9	0	-917	0	0	multi-exon	FALSE	canonical	3	55	junction_7	448.68263770175	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4886	False	NA	29	True	ATTAAA	-17	NA	80634565	80640758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639634_80639723_80639805
ENSMUST00000151933.2	chr7	+	4069	8	FSM	ENSMUSG00000030386.20	ENSMUST00000151933.2	4069	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	49.3550237295753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGTTACCTAATTCC	NA	False	NA	21	True	AATAAA	-25	NA	12212289	12229489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12215044_12215109_12223496_12223624_12223875_12223972_12226283
ENSMUST00000151937.8-1	chr2	-	2928	18	FSM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	216	3207	0	420	multi-exon	TRUE	canonical	3	27	junction_16	36.6501273382513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGAGTTGGTTTCCTT	NA	False	NA	-3	True	AATAAA	-17	NA	71197877	71104613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ENSMUST00000151966.8	chr11	-	1734	11	FSM	ENSMUSG00000020528.15	ENSMUST00000151966.8	1734	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	65.5872701063248	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	292	False	NA	-7	True	AATAAA	-22	NA	61652838	61620479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61647020_61647172_61647407_61647504_61652779
ENSMUST00000152016.2	chr11	+	909	4	FSM	ENSMUSG00000001105.16	ENSMUST00000152016.2	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	104.521130240094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	NA	False	NA	35	True	AATGAA	-42	NA	78427298	78432310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720
ENSMUST00000152026.2	chr2	+	673	2	FSM	ENSMUSG00000026790.20	ENSMUST00000152026.2	673	2	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGAGCAAAATCCTGGA	NA	False	NA	NA	False	NA	NA	NA	29815483	29816757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29816115_29816715
ENSMUST00000152065.8	chr12	+	4728	22	FSM	ENSMUSG00000020654.16	ENSMUST00000152065.8	4728	22	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	15.9929122623238	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGACTGTTGTGGCAATTC	NA	False	NA	8	True	ATTAAA	-18	NA	4183396	4263525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4183779_4184152_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ENSMUST00000152080.8	chr8	-	4383	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGAGTTTGGTTCTGGT	NA	False	NA	-6	True	AATAAA	-15	NA	73246458	73234484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ENSMUST00000152080.8-0	chr8	-	3445	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	0	938	0	-938	multi-exon	FALSE	canonical	3	222	junction_3	20.3901937214927	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGCTCACAGCAAGTAT	NA	False	NA	-11	True	AATAAA	-20	NA	73246458	73235422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ENSMUST00000152081.2	chr4	-	680	2	FSM	ENSMUSG00000040761.17	ENSMUST00000152081.2	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGACGTGTCCTCCCTT	NA	False	NA	NA	False	NA	NA	NA	141265564	141249113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141249704_141265474
ENSMUST00000152098.8	chr4	-	952	6	FSM	ENSMUSG00000055401.15	ENSMUST00000152098.8	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTAGTAATCGGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	148236597	148230465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
ENSMUST00000152101.2	chr6	-	2908	2	FSM	ENSMUSG00000039130.19	ENSMUST00000152101.2	2908	2	0	0	0	0	multi-exon	FALSE	canonical	3	1089	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	4	True	NA	NA	False	NA	NA	NA	30391009	30384777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30387532_30390855
ENSMUST00000152105.8	chr5	+	3181	4	FSM	ENSMUSG00000029651.17	ENSMUST00000152105.8	585	4	9	-2605	0	0	multi-exon	FALSE	canonical	3	51	junction_1	27.4752413799932	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGGTCTGTGTTAAC	NA	False	NA	13	True	ATTAAA	-26	NA	148239983	148252875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_148240187_148240292_148240413_148243439_148243538_148250115
ENSMUST00000152119.2	chr11	+	1014	2	FSM	ENSMUSG00000020397.16	ENSMUST00000152119.2	381	2	36	-669	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAATTGTCATTCTTGGA	NA	False	NA	12	True	AATAAA	-14	NA	46327787	46332354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_46327837_46331389
ENSMUST00000152126.8	chr4	+	1519	5	FSM	ENSMUSG00000028797.21	ENSMUST00000152126.8	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	194.785779768442	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAGCTTAGCAAATGT	3196	False	NA	9	True	AATAAA	-9	NA	129494492	129502314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129494525_129494775_129495037_129495987_129496055_129500879_129500973_129501248
ENSMUST00000152147.8	chr6	+	600	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	62	1859	0	0	multi-exon	FALSE	canonical	3	978	junction_2	33.5	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCTGGTGAATTAATC	NA	False	NA	13	True	ATTAAA	-17	NA	35229650	35238572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_35229718_35237344_35237399_35238093
ENSMUST00000152162.2	chr11	+	548	2	FSM	ENSMUSG00000063316.14	ENSMUST00000152162.2	548	2	0	0	0	0	multi-exon	FALSE	canonical	3	8302	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	4817	False	NA	62	True	ATTAAA	-18	NA	101335699	101336355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101336157_101336264
ENSMUST00000152178.2	chr2	+	2784	6	FSM	ENSMUSG00000036202.17	ENSMUST00000152178.2	2784	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	215.141441846986	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTTAGTGCCTGCC	NA	False	NA	22	True	ATTAAA	-17	NA	52002144	52012393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ENSMUST00000152183.2	chr11	+	849	3	FSM	ENSMUSG00000020843.16	ENSMUST00000152183.2	362	3	0	-487	0	240	multi-exon	FALSE	canonical	3	21	junction_1	125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCAGTTAGTATCTTT	NA	False	NA	14	True	AGTAAA	-24	NA	76298016	76305395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_76298269_76301952_76302026_76304871
ENSMUST00000152209.2	chrX	-	1280	2	FSM	ENSMUSG00000050424.10	ENSMUST00000152209.2	1280	2	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTATGTTCTTTCTGGC	NA	False	NA	-7	True	AATAAA	-14	NA	72079709	72077593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72077934_72078769
ENSMUST00000152225.2	chr1	+	2994	17	FSM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	25.2319706671913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTATTCCGTTTGTCAC	NA	False	NA	9	True	AATAAA	-16	NA	72622773	72672293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_72622897_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ENSMUST00000152227.8	chr15	-	2934	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	False	NA	-9	True	AATAAA	-16	NA	81900364	81876723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ENSMUST00000152227.8-0	chr15	-	1459	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	0	1475	0	-151	multi-exon	FALSE	canonical	3	162	junction_5	9.30806102257608	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTCTGAGAATTAGTT	NA	False	NA	-2	True	AATAAA	-31	NA	81900364	81878198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ENSMUST00000152233.9	chr1	+	2739	13	FSM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	0	0	0	0	multi-exon	TRUE	canonical	2	42	junction_4	25.5582124222768	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	44	False	NA	19	True	AATAAA	-15	NA	75168803	75176031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ENSMUST00000152266.2	chrX	+	553	2	FSM	ENSMUSG00000079435.10	ENSMUST00000152266.2	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	10431	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTTTGATTGCAGTTG	NA	False	NA	15	True	AATAAA	-14	NA	133487829	133488745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133488323_133488685
ENSMUST00000152274.9	chr3	-	2952	10	FSM	ENSMUSG00000055436.19	ENSMUST00000152274.9	2952	10	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_1	36.9744656636321	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGCATGTCGTTGGTC	NA	False	NA	-4	True	NA	NA	NA	157729059	157716280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477
ENSMUST00000152277.8	chr2	-	2297	7	FSM	ENSMUSG00000002109.15	ENSMUST00000152277.8	2297	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	33.2214789957742	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAACAGGGTTTCTGAGT	4648	False	NA	-26	True	AATAAA	-35	NA	91065676	91041916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91042358_91042624_91042671_91042794_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91064452
ENSMUST00000152313.2	chr2	+	1436	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	604	0	604	0	multi-exon	FALSE	canonical	3	34	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGAATCCTAAGTTATA	NA	False	NA	NA	False	AATAAA	-16	NA	94237099	94242027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_94237312_94240803
ENSMUST00000152327.8	chr2	+	1664	9	FSM	ENSMUSG00000027323.11	ENSMUST00000152327.8	2975	9	0	1311	0	518	multi-exon	FALSE	canonical	2	25	junction_7	266.546870878275	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGTTATTTGCTGGAG	NA	False	NA	20	True	AATAAA	-16	NA	118943297	118966207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964867_118964990_118965529
ENSMUST00000152362.7	chr2	-	1579	10	FSM	ENSMUSG00000039449.15	ENSMUST00000152362.7	1579	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	16.2305914484172	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATGGGTCATTGAAT	NA	False	NA	NA	False	NA	NA	NA	4656924	4628838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUST00000152367.8	chr2	-	2071	19	FSM	ENSMUSG00000027201.17	ENSMUST00000152367.8	2071	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	259.220031423804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGAAGTCAGACCAGCC	NA	False	NA	NA	False	AATAAA	-11	NA	124965546	124928487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_124928637_124929596_124929624_124930782_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124955962_124955971_124957357_124957411_124958584_124958794_124965304
ENSMUST00000152371.2	chr2	-	1296	2	FSM	ENSMUSG00000015839.7	ENSMUST00000152371.2	1447	2	0	151	0	-151	multi-exon	FALSE	canonical	3	19	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTGTTGTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	75534833	75521546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_75522717_75534707
ENSMUST00000152410.8	chr7	-	627	5	FSM	ENSMUSG00000030960.17	ENSMUST00000152410.8	627	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	126.610623566903	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCGTTTTGAATGTGTG	NA	False	NA	NA	False	NA	NA	NA	132454344	132433088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132433306_132438828_132438937_132452319_132452439_132453154_132453221_132454227
ENSMUST00000152417.8	chr17	-	2157	16	FSM	ENSMUSG00000024371.15	ENSMUST00000152417.8	2157	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	4.40403855064366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTCTTATGTCTTG	NA	False	NA	1	True	AATAAA	-19	NA	35101002	35081579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35082008_35082154_35082205_35082320_35082451_35082599_35082692_35082838_35082916_35083020_35083187_35083283_35083402_35083487_35083583_35083704_35083846_35085493_35085584_35091342_35091484_35092437_35092577_35094863_35094998_35095129_35095232_35095309_35095487_35100925
ENSMUST00000152441.2	chr2	-	541	3	FSM	ENSMUSG00000062997.7	ENSMUST00000152441.2	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	39700	junction_1	236.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATGACAACGACAATAA	NA	False	NA	-48	True	NA	NA	NA	38895055	38891630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_38891778_38894118_38894201_38894743
ENSMUST00000152460.2	chr17	-	841	5	FSM	ENSMUSG00000024170.16	ENSMUST00000152460.2	841	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	40.4992283877113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACACTTGTGTTCCTGTGA	NA	False	NA	-48	True	NA	NA	NA	25322617	25318590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25321610_25321703_25322553
ENSMUST00000152461.2	chr2	-	1316	3	FSM	ENSMUSG00000013523.14	ENSMUST00000152461.2	371	3	0	-945	0	0	multi-exon	FALSE	canonical	3	30	junction_2	23.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGGTGGTTTTTTTTTT	4146	False	NA	1	True	AATAAA	-22	NA	170191715	170189063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_170190069_170191101_170191384_170191686
ENSMUST00000152463.8	chrX	-	1272	7	FSM	ENSMUSG00000025283.16	ENSMUST00000152463.8	1272	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	540.496993516153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGAGCATTTTTACTAGT	NA	False	NA	-7	True	AATAAA	-24	NA	153999445	153996127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998116_153998227_153998596_153998681_153998780_153998833_153999098
ENSMUST00000152493.2	chr14	+	2997	5	FSM	ENSMUSG00000016831.13	ENSMUST00000152493.2	2997	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_3	28.3934411440389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTAAGAATTCATTC	NA	False	NA	NA	False	TATAAA	-15	NA	52517021	52529814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52517114_52517277_52517347_52523116_52524989_52528217_52528299_52528931
ENSMUST00000152495.8	chr5	+	1766	10	FSM	ENSMUSG00000007080.15	ENSMUST00000152495.8	1766	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_5	29.0151088781324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTTATGCTTCCACAC	8237	False	NA	25	True	AGTAAA	-16	NA	110475484	110485317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ENSMUST00000152518.8	chr7	-	3142	7	FSM	ENSMUSG00000025722.17	ENSMUST00000152518.8	3142	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	17.3365381652611	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTGTGTGTATGAG	NA	False	NA	-4	True	AATAAA	-15	NA	80550980	80540471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ENSMUST00000152521.2	chr11	+	924	2	FSM	ENSMUSG00000035530.14	ENSMUST00000152521.2	924	2	0	0	0	0	multi-exon	FALSE	canonical	3	12221	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTATGTCACTAGAGGGA	4780	False	NA	NA	False	NA	NA	NA	100211533	100212575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_100211656_100211773
ENSMUST00000152524.2	chr2	-	801	2	FSM	ENSMUSG00000086657.3	ENSMUST00000152524.2	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGGCATATTATAAT	NA	False	NA	NA	False	AATAAA	-16	NA	14078745	14075142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_14075592_14078393
ENSMUST00000152551.2	chr2	+	765	3	FSM	ENSMUSG00000027637.4	ENSMUST00000152551.2	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	636.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTGGTTCTCCGTCAG	4653	False	NA	NA	False	NA	NA	NA	156705058	156715318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156705338_156714257_156714388_156714962
ENSMUST00000152555.8	chr13	-	1877	9	FSM	ENSMUSG00000021687.15	ENSMUST00000152555.8	1877	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	33.8258407138684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTTTGGGTTCTGTACT	NA	False	NA	NA	False	AATGAA	-3	NA	94422365	94339881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94422073
ENSMUST00000152580.8	chr2	-	1822	5	FSM	ENSMUSG00000038671.16	ENSMUST00000152580.8	1822	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	29.3715423496962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6146	False	NA	NA	False	NA	NA	NA	181007127	181001107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806
ENSMUST00000152607.8	chr4	-	2354	5	FSM	ENSMUSG00000043872.15	ENSMUST00000152607.8	2354	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	205.736481937453	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAACTTGCAACTTTGAG	NA	False	NA	NA	False	AATGAA	-11	NA	126954853	126941434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_126943406_126944356_126944395_126944536_126944666_126945067_126945219_126954788
ENSMUST00000152608.8	chr2	-	1654	10	FSM	ENSMUSG00000027108.16	ENSMUST00000152608.8	1654	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	135.509008401747	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	NA	False	NA	-3	True	AATAAA	-16	NA	73044770	72923543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73044629
ENSMUST00000152611.8	chr11	-	2882	14	FSM	ENSMUSG00000017405.15	ENSMUST00000152611.8	2882	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	9.26148734971841	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCTTATGATCTCTT	6312	False	NA	0	True	AATAAA	-14	NA	78067437	78056931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ENSMUST00000152612.8	chr18	-	4335	20	FSM	ENSMUSG00000003778.15	ENSMUST00000152612.8	4335	20	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	140.778976490123	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757606	34732882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUST00000152620.2	chr7	-	504	4	FSM	ENSMUSG00000025102.15	ENSMUST00000152620.2	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	92.1604880388312	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTCTACAACTCCAGAGG	NA	False	NA	NA	False	NA	NA	NA	81439213	81432851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81432887_81435824_81435953_81438197_81438325_81438999
ENSMUST00000152665.3	chr17	+	901	5	FSM	ENSMUSG00000037805.16	ENSMUST00000152665.3	901	5	0	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_3	1346.05653205948	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCCTTGGTGTGCCTG	NA	False	NA	-5	True	AATAAA	-14	NA	28547559	28550001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUST00000152666.8	chr4	+	3470	3	FSM	ENSMUSG00000028248.16	ENSMUST00000152666.8	3470	3	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	48	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAGAAAGAAAAGACT	-1	True	NA	NA	False	NA	NA	NA	21848057	21860468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_21848140_21854346_21854446_21857179
ENSMUST00000152672.2	chr17	+	1718	2	FSM	ENSMUSG00000034377.11	ENSMUST00000152672.2	1718	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACTAAAGGAGAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	6157132	6189064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6157272_6187485
ENSMUST00000152681.8	chr14	+	2624	15	FSM	ENSMUSG00000022214.16	ENSMUST00000152681.8	2624	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	36.5692661191033	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTGTGTCTGTGTCA	NA	False	NA	10	True	AATAAA	-15	NA	55797990	55807518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55798085_55798531_55798877_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUST00000152689.8	chr1	-	3043	11	FSM	ENSMUSG00000062729.13	ENSMUST00000152689.8	3043	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	29.1204395571221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5189	False	NA	-15	True	AGTAAA	-16	NA	171108760	171104564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ENSMUST00000152704.8	chr13	-	888	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	5972	junction_2	361.40138350593	2125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453514	98446404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUST00000152706.2	chr1	-	565	5	FSM	ENSMUSG00000062580.10	ENSMUST00000152706.2	565	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	1180.82111261613	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGCGGGCCATAAAGAG	NA	False	NA	-90	True	TTTAAA	-22	NA	135237577	135229553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237504
ENSMUST00000152717.8	chr4	+	581	6	FSM	ENSMUSG00000063172.14	ENSMUST00000152717.8	581	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	155.089135660755	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATTACAACAAAATGCTC	NA	False	NA	-93	True	NA	NA	NA	107110789	107137034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107110925_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUST00000152724.2	chr17	+	1443	5	FSM	ENSMUSG00000090115.8	ENSMUST00000152724.2	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	46.8794997840207	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTTCTATGAAGATCC	NA	False	NA	6	True	TATAAA	-3	NA	47983644	47991981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ENSMUST00000152730.4	chrX	+	876	3	FSM	ENSMUSG00000050197.6	ENSMUST00000152730.4	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	2	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTAATTTTATGTGC	NA	False	NA	2	True	AATAAA	-15	NA	37210095	37218844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_37210700_37211950_37211997_37218618
ENSMUST00000152731.2	chr3	+	3442	2	FSM	ENSMUSG00000038205.13	ENSMUST00000152731.2	3442	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATTGTTTTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	97574655	97580397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97574744_97577043
ENSMUST00000152739.2	chrX	-	784	2	FSM	ENSMUSG00000031320.10	ENSMUST00000152739.2	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	11043	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGAATCTCTGTTGGGCT	NA	False	NA	NA	False	TTTAAA	-40	NA	101232942	101231232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_101231978_101232903
ENSMUST00000152749.2	chr11	-	547	4	FSM	ENSMUSG00000020330.17	ENSMUST00000152749.2	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_2	38.0292285252044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGAGACTACGACTGATTA	NA	False	NA	NA	False	NA	NA	NA	40624218	40615457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_40615748_40619253_40619334_40619948_40620048_40624140
ENSMUST00000152755.8	chr11	-	3255	6	FSM	ENSMUSG00000001034.18	ENSMUST00000152755.8	3255	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	83.0093970584054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385092	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384331
ENSMUST00000152778.2	chr1	+	696	5	FSM	ENSMUSG00000026276.21	ENSMUST00000152778.2	696	5	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_1	103.714451741307	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAACATAAACAAAGCACTG	NA	False	NA	NA	False	NA	NA	NA	93406742	93425471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062
ENSMUST00000152783.2	chr3	+	1094	4	FSM	ENSMUSG00000036873.14	ENSMUST00000152783.2	514	4	-148	-432	0	0	multi-exon	FALSE	canonical	3	74	junction_3	20.0388511535855	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGATGATCATGGAAATAA	NA	False	NA	-10	True	NA	NA	NA	145643796	145649997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145644084_145644297_145644425_145644652_145644852_145649516
ENSMUST00000152790.8	chr11	-	714	4	FSM	ENSMUSG00000087165.8	ENSMUST00000152790.8	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	7.84573486395988	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTTGTCTCAGTGATT	NA	False	NA	-3	True	NA	NA	NA	57692243	57686324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_57686621_57686851_57687000_57687137_57687224_57692059
ENSMUST00000152796.8	chr4	-	4129	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	0	0	0	0	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGGCCTGCATGTATA	NA	False	NA	NA	False	ATTAAA	-19	NA	131939614	131912222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ENSMUST00000152796.8-0	chr4	-	2762	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	212	1155	0	223	multi-exon	FALSE	canonical	3	863	junction_4	54.1589097009901	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTCCAGTACCACTTAGT	NA	False	NA	-17	True	AATAAA	-20	NA	131939402	131913377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ENSMUST00000152807.8	chr2	+	2705	5	FSM	ENSMUSG00000068040.11	ENSMUST00000152807.8	2705	5	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_2	25.6161570107618	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153042167	153052386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUST00000152818.8	chr2	-	1997	6	FSM	ENSMUSG00000005882.19	ENSMUST00000152818.8	1997	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	208.429940267707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	NA	False	NA	-31	True	AATAAA	-20	NA	155771980	155688813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155690447_155693278_155693393_155700031_155700052_155753665_155753757_155763554_155763646_155771932
ENSMUST00000152830.9	chr17	-	5130	11	FSM	ENSMUSG00000023927.16	ENSMUST00000152830.9	5993	11	1674	-811	-650	234	multi-exon	FALSE	canonical	3	34	junction_1	11.1821285987955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATGGCAGGGTTTGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	52120358	52045687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_52047442_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116316_52118795
ENSMUST00000152843.2	chr10	-	900	6	FSM	ENSMUSG00000004667.19	ENSMUST00000152843.2	900	6	0	0	0	0	multi-exon	FALSE	canonical	3	2552	junction_2	164.012926319848	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCACTGCTCTGCACA	5609	False	NA	NA	False	AATGAA	-37	NA	79875535	79872008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79872136_79872360_79872433_79872597_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUST00000152868.2	chr16	+	416	2	FSM	ENSMUSG00000046516.11	ENSMUST00000152868.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAGAAAATATGCTGAA	NA	False	NA	6	True	ATTAAA	-8	NA	38167357	38173103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38167658_38172987
ENSMUST00000152874.8	chr11	-	1691	9	FSM	ENSMUSG00000015869.17	ENSMUST00000152874.8	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	291.250321888234	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381140	116361670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ENSMUST00000152885.8	chr9	+	2450	4	FSM	ENSMUSG00000041064.15	ENSMUST00000152885.8	2450	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	7.34846922834953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65494486	65497774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65495677_65496286_65496887_65496994_65497110_65497229
ENSMUST00000152887.3	chr16	-	1355	10	FSM	ENSMUSG00000033918.17	ENSMUST00000152887.3	1355	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	546.988929402496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCGTTCCTTCAGAGGC	NA	False	NA	-14	True	AATAAA	-26	NA	20120563	20098567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120379
ENSMUST00000152919.3	chr2	-	699	5	FSM	ENSMUSG00000027620.17	ENSMUST00000152919.3	699	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	947.747988655212	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGCCATGAAGAACGTAGC	NA	False	NA	-26	True	NA	NA	NA	156022069	156019280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156019306_156019552_156019827_156020799_156020873_156021096_156021161_156021806
ENSMUST00000152938.9	chr8	-	785	6	FSM	ENSMUSG00000048967.17	ENSMUST00000152938.9	785	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	7.28285658241325	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGCCTCTTTTGTGTA	6664	False	NA	0	True	AATAAA	-16	NA	70346625	70340437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70340673_70341636_70341788_70341858_70341973_70342092_70342204_70343515_70343625_70346560
ENSMUST00000152939.8	chr10	+	420	3	FSM	ENSMUSG00000020153.15	ENSMUST00000152939.8	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	1255	junction_1	451	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTGATTCTTGATTGT	9689	False	NA	NA	False	NA	NA	NA	80085282	80089247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80085326_80088230_80088268_80088907
ENSMUST00000152941.2	chr2	-	1198	4	FSM	ENSMUSG00000078897.11	ENSMUST00000152941.2	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	107.953693776545	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTCTTCCTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	175277575	175265685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_175266617_175266821_175266949_175273972_175274028_175277490
ENSMUST00000152943.8	chr4	-	437	3	FSM	ENSMUSG00000085241.8	ENSMUST00000152943.8	437	3	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_1	21	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTGATTTAATGTGT	NA	False	NA	-9	True	ATTAAA	-15	NA	132080997	132079243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132079555_132079973_132080010_132080907
ENSMUST00000152946.8	chr19	-	2108	11	FSM	ENSMUSG00000025223.16	ENSMUST00000152946.8	2108	11	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	177.433255056655	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	6718	False	NA	-30	True	ATTAAA	-21	NA	46033653	46021031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46021781_46022476_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ENSMUST00000152954.8	chr18	+	3336	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGACCCTTTGCCTGAC	NA	False	NA	NA	False	NA	NA	NA	36916060	36925615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUST00000152954.8-0	chr18	+	2384	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	261	691	0	177	multi-exon	FALSE	canonical	3	88	junction_10	16.7752711519731	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGACCTGAGTTCATTT	NA	False	NA	11	True	NA	NA	NA	36916321	36924924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUST00000152974.8	chr8	-	3116	7	FSM	ENSMUSG00000039814.16	ENSMUST00000152974.8	3116	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	13.3998341614945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCATTAGTGTTAGTAT	NA	False	NA	-6	True	NA	NA	NA	19000932	18982747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000551
ENSMUST00000152976.2	chr5	+	694	3	FSM	ENSMUSG00000067274.11	ENSMUST00000152976.2	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	7201	junction_2	8997.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCCAGAGGCACCATTG	NA	False	NA	NA	False	NA	NA	NA	115697636	115699276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115697948_115698799_115699064_115699157
ENSMUST00000152979.8	chr11	+	3976	23	FSM	ENSMUSG00000020898.19	ENSMUST00000152979.8	3976	23	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	94.2205957376466	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5261	False	NA	21	True	AATAAA	-21	NA	68906911	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUST00000152982.3	chr17	-	822	3	FSM	ENSMUSG00000052146.17	ENSMUST00000152982.3	822	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTGATTCTGATTGCCC	NA	False	NA	NA	False	NA	NA	NA	27854218	27853046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27853218_27853299_27853450_27853717
ENSMUST00000153008.8	chr2	+	765	4	FSM	ENSMUSG00000015092.10	ENSMUST00000153008.8	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	2578	junction_3	170.755836080515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTTCTCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	25447882	25451373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980
ENSMUST00000153033.2	chr2	-	1296	7	FSM	ENSMUSG00000027423.16	ENSMUST00000153033.2	1296	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	478.377814424262	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCAGATGAAGACTTAAAA	NA	False	NA	NA	False	TTTAAA	-24	NA	144102682	144096713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_144096734_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644
ENSMUST00000153038.8	chr11	+	738	4	FSM	ENSMUSG00000020849.14	ENSMUST00000153038.8	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	10099	junction_3	548.665249086869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATAAATTTTGGGGTT	3083	False	NA	NA	False	NA	NA	NA	75623786	75647942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642
ENSMUST00000153056.8	chr12	+	2720	7	FSM	ENSMUSG00000021134.18	ENSMUST00000153056.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	608.09467921442	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTTGGTCTGTTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	80992305	80997277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
ENSMUST00000153059.2	chr4	-	373	2	FSM	ENSMUSG00000028857.17	ENSMUST00000153059.2	373	2	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTCACACATAACTCTCA	NA	False	NA	NA	False	NA	NA	NA	133005062	132998206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132998359_133004841
ENSMUST00000153065.8	chr13	-	2502	8	FSM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	177.014469603419	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713116	54699035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
ENSMUST00000153073.8	chr11	-	2061	10	FSM	ENSMUSG00000007646.14	ENSMUST00000153073.8	2061	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	58.9867112048589	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAGAAATAAAA	NA	False	NA	-38	True	NA	NA	NA	87295332	87269416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_87270314_87271657_87271719_87279073_87279154_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ENSMUST00000153075.8	chr16	-	3511	22	FSM	ENSMUSG00000022843.18	ENSMUST00000153075.8	3511	22	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_8	38.9931676089723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACACCTAATTAGCCAC	NA	False	NA	-33	True	AATAAA	-13	NA	20534914	20521747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ENSMUST00000153077.2	chr7	+	5669	18	FSM	ENSMUSG00000045039.10	ENSMUST00000153077.2	5669	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_12	6.55242367795027	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGCATCGTAACTTCAT	NA	False	NA	8	True	AATAAA	-13	NA	25045405	25065339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ENSMUST00000153102.9	chr12	+	4462	12	FSM	ENSMUSG00000037486.19	ENSMUST00000153102.9	4462	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.9023096981211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGAGACATTAATCAGGA	NA	False	NA	14	True	AATAAA	-13	NA	3476900	3552466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3477213_3492473_3492557_3495451_3495455_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ENSMUST00000153110.8	chr7	-	1016	5	FSM	ENSMUSG00000070371.12	ENSMUST00000153110.8	1016	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	32.1820990614348	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534651	127531809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533681_127533800_127534618
ENSMUST00000153115.8	chr1	-	3495	3	FSM	ENSMUSG00000044768.17	ENSMUST00000153115.8	3495	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCGTGGTGTTTTA	NA	False	NA	-1	True	AATAAA	-18	NA	97589401	97571627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_97574087_97582324_97582415_97588455
ENSMUST00000153146.9	chr8	+	801	6	FSM	ENSMUSG00000014856.13	ENSMUST00000153146.9	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	152.856010676715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	259	False	NA	16	True	AATAAA	-18	NA	106052993	106055687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055117_106055239_106055325_106055403
ENSMUST00000153157.8	chr11	-	989	4	FSM	ENSMUSG00000020925.17	ENSMUST00000153157.8	989	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	267.304237818175	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCTTCTTGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	102588560	102579144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102579686_102581026_102581163_102582936_102583025_102588336
ENSMUST00000153164.2	chr1	-	2706	2	FSM	ENSMUSG00000053483.16	ENSMUST00000153164.2	2706	2	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	171115532	171112035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_171114544_171115334
ENSMUST00000153167.2	chr10	+	848	4	FSM	ENSMUSG00000035504.17	ENSMUST00000153167.2	848	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	38.0029238641216	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTGTATAGCTGAGGCT	7272	False	NA	NA	False	NA	NA	NA	80166031	80170266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799
ENSMUST00000153173.8	chr7	-	755	3	FSM	ENSMUSG00000030869.12	ENSMUST00000153173.8	755	3	0	0	0	0	multi-exon	FALSE	canonical	3	5329	junction_1	167.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTCTCACTTGTAGAG	6538	False	NA	NA	False	ATTAAA	-27	NA	121700929	121692347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121692928_121695831_121695955_121700877
ENSMUST00000153183.8	chr5	+	4361	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	29	3098	0	2841	multi-exon	FALSE	canonical	3	208	junction_3	17.4610678049451	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCGCATGGTGATTCTTTG	9519	False	NA	3	True	NA	NA	NA	135178539	135191516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ENSMUST00000153185.8	chr11	+	1578	6	FSM	ENSMUSG00000001313.13	ENSMUST00000153185.8	1578	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	71.7568115233669	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	7809	False	NA	21	True	AATAAA	-21	NA	101355824	101362679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_101355971_101356456_101356760_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ENSMUST00000153187.8	chr16	-	2922	11	FSM	ENSMUSG00000034064.15	ENSMUST00000153187.8	2922	11	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_10	237.918389369128	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6266	False	NA	-4	True	NA	NA	NA	38370584	38345501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
ENSMUST00000153191.8	chr7	-	4182	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTGGTGTCTGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	141119729	141073048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ENSMUST00000153191.8-1	chr7	-	1985	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-16	2213	0	0	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGACCTACTTATTTCT	NA	False	NA	-22	True	NA	NA	NA	141119745	141075261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ENSMUST00000153271.2	chr2	-	404	2	FSM	ENSMUSG00000068290.12	ENSMUST00000153271.2	404	2	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130496697	130495954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130496243_130496581
ENSMUST00000153309.8	chr7	-	931	5	FSM	ENSMUSG00000002983.18	ENSMUST00000153309.8	931	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.4741199377221	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGGCACAGGTACCAGAC	NA	False	NA	NA	False	NA	NA	NA	19362398	19351697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19351845_19353438_19353768_19356850_19356860_19361847_19361896_19362000
ENSMUST00000153313.9	chr11	-	5112	3	FSM	ENSMUSG00000056579.19	ENSMUST00000153313.9	5112	3	0	0	0	0	multi-exon	FALSE	canonical	3	2126	junction_1	263	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTTGGGTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	3597530	3589793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3593180_3594771_3595524_3596556
ENSMUST00000153337.2	chr18	-	1513	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTGTGAAGTTTATA	NA	False	NA	NA	False	TTTAAA	-24	NA	24153377	24146981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
ENSMUST00000153337.2-0	chr18	-	3215	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	-50	-1652	0	1652	multi-exon	FALSE	canonical	3	66	junction_3	83.8212383587835	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCTTGGAATTGC	NA	False	NA	NA	False	AATAAA	-23	NA	24153427	24145329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
ENSMUST00000153360.8	chr18	-	2498	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_3	55.0789206502814	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGGGTGTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	24255010	24237813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ENSMUST00000153386.8	chrX	-	2884	12	FSM	ENSMUSG00000025151.17	ENSMUST00000153386.8	2884	12	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_9	165.668493041908	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGTGCTTCTCATC	NA	False	NA	-4	True	AATAAA	-19	NA	93585596	93579081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ENSMUST00000153395.8	chr11	-	1564	11	FSM	ENSMUSG00000018677.10	ENSMUST00000153395.8	1564	11	0	0	0	0	multi-exon	FALSE	canonical	3	4398	junction_2	183.250211459632	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7726	False	NA	95	True	NA	NA	NA	102298332	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102294362_102294458_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUST00000153442.8	chr5	-	2374	7	FSM	ENSMUSG00000029328.16	ENSMUST00000153442.8	2374	7	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_3	92.4764234218046	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186728	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUST00000153451.9	chr7	+	604	5	FSM	ENSMUSG00000040952.17	ENSMUST00000153451.9	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	11081.527678416	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCTGGACAGGTGAGAGGT	NA	False	NA	NA	False	NA	NA	NA	24584075	24588375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24584280_24584560_24584632_24584876_24584978_24587706_24587891_24588331
ENSMUST00000153455.8	chr15	-	1252	5	FSM	ENSMUSG00000005360.15	ENSMUST00000153455.8	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	23.8156986040721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATGCATAACAT	NA	False	NA	NA	False	NA	NA	NA	8739900	8710004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_8710661_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ENSMUST00000153467.3	chr4	+	1658	5	FSM	ENSMUSG00000070972.14	ENSMUST00000153467.3	2393	5	-21	756	0	301	multi-exon	FALSE	canonical	2	4	junction_1	45.2189119727576	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGTGTGAAGTGT	3	True	NA	5	True	NA	NA	NA	59003171	59022984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_59003558_59013631_59013856_59017669_59017823_59020058_59020530_59022560
ENSMUST00000153470.9	chr7	-	2224	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTACCTTGACAGTGG	NA	False	NA	-14	True	AATAAA	-17	NA	89590412	89566736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ENSMUST00000153470.9-0	chr7	-	1065	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	0	1159	0	0	multi-exon	FALSE	canonical	3	695	junction_3	227.142026054185	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATGTGTAACCTTTTCG	NA	False	NA	14	True	AATAAA	-33	NA	89590412	89567895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ENSMUST00000153472.2	chr4	-	763	3	FSM	ENSMUSG00000023075.10	ENSMUST00000153472.2	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGATAAGCAGAGCCC	NA	False	NA	NA	False	NA	NA	NA	123644024	123632732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123633071_123637225_123637367_123643740
ENSMUST00000153474.9	chr4	+	606	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	27.427176303805	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTTTTATTTATTTA	NA	False	NA	27	True	AATAAA	-16	NA	132035988	132038335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ENSMUST00000153482.2	chr11	+	826	3	FSM	ENSMUSG00000020877.12	ENSMUST00000153482.2	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGATCCAGGGTAGGAGT	NA	False	NA	NA	False	NA	NA	NA	96920959	96923102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_96921416_96921705_96921888_96922914
ENSMUST00000153488.9	chr14	+	4446	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	37.2458051329274	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACAGCTGTGTGCATTCT	NA	False	NA	37	True	AATAAA	-34	NA	49409682	49428342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ENSMUST00000153510.9	chr11	+	1887	12	FSM	ENSMUSG00000037243.18	ENSMUST00000153510.9	1887	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	49.3946830209872	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTGGTGCTACAGATAT	7673	False	NA	14	True	AATAAA	-21	NA	58197894	58205439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ENSMUST00000153514.8	chr2	-	2127	18	FSM	ENSMUSG00000027620.17	ENSMUST00000153514.8	2127	18	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_15	799.195928097666	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022104	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156021096_156021161_156021806
ENSMUST00000153514.8-0	chr2	-	2846	18	FSM	ENSMUSG00000027620.17	ENSMUST00000153514.8	2127	18	-28	-691	0	0	multi-exon	FALSE	canonical	3	117	junction_15	799.195928097666	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022132	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156021096_156021161_156021806
ENSMUST00000153520.3	chr11	+	503	2	FSM	ENSMUSG00000038366.16	ENSMUST00000153520.3	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAACCCGGCGCTCTGG	NA	False	NA	NA	False	NA	NA	NA	97697327	97706608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97697746_97706523
ENSMUST00000153524.2	chr12	+	582	3	FSM	ENSMUSG00000001175.17	ENSMUST00000153524.2	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	3923	junction_2	23	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTTCTGCTTACTGAG	9259	False	NA	NA	False	NA	NA	NA	100165787	100170196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_100165976_100168651_100168683_100169833
ENSMUST00000153526.8	chr11	-	2946	18	FSM	ENSMUSG00000020918.15	ENSMUST00000153526.8	2946	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	124.621058832359	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	7071	False	NA	-1	True	AATAAA	-18	NA	100602999	100595571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601075_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUST00000153534.2	chr11	-	2497	4	FSM	ENSMUSG00000050132.14	ENSMUST00000153534.2	2497	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	7.78888096369861	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGCACAAGTCACTACTA	4413	False	NA	76	True	AAGAAA	-19	NA	78374624	78364038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259
ENSMUST00000153537.2	chr8	-	501	4	FSM	ENSMUSG00000031516.12	ENSMUST00000153537.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	45.4386032649185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGAGTACTAGCTGCTC	NA	False	NA	NA	False	AAGAAA	-33	NA	34575631	34561855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34562127_34564342_34564449_34573495_34573561_34575572
ENSMUST00000153566.2	chr7	+	3781	5	FSM	ENSMUSG00000030753.16	ENSMUST00000153566.2	607	5	-225	-2949	0	0	multi-exon	FALSE	canonical	3	19	junction_4	84.5192285814299	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352309	98367269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362161_98364188
ENSMUST00000153573.2	chr10	+	447	3	FSM	ENSMUSG00000054708.18	ENSMUST00000153573.2	447	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTCTTCAGGCTTGGA	2846	False	NA	NA	False	AAGAAA	-6	NA	81464412	81465581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81464475_81464573_81464760_81465382
ENSMUST00000153581.2	chr2	+	2243	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	0	6057	0	699	multi-exon	FALSE	canonical	3	345	junction_2	41.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTTTAAGGTAA	NA	False	NA	13	True	AATAAA	-10	NA	119424783	119431926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_119424916_119426739_119426993_119430068
ENSMUST00000153609.8	chr7	+	1248	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGTGTATCTGCA	NA	False	NA	23	True	AATAAA	-23	NA	65710085	65724335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ENSMUST00000153609.8-0	chr7	+	1022	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	226	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_6	274.913622798144	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGTGTATCTGCA	NA	False	NA	23	True	AATAAA	-23	NA	65710311	65724335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ENSMUST00000153627.8	chr12	+	2036	16	FSM	ENSMUSG00000021177.17	ENSMUST00000153627.8	2036	16	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	45.8998910674089	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	False	NA	19	True	ATTAAA	-19	NA	99850795	99921478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUST00000153656.2	chr16	-	793	5	FSM	ENSMUSG00000022533.15	ENSMUST00000153656.2	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	17.9791545963652	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTTTTTATTCTTTT	NA	False	NA	NA	False	AATAAA	-30	NA	30207303	30180468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
ENSMUST00000153658.3	chr17	-	1093	13	FSM	ENSMUSG00000024012.19	ENSMUST00000153658.3	1093	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	333.56966622015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566526	29551049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29551213_29551634_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ENSMUST00000153666.2	chr3	-	2527	3	FSM	ENSMUSG00000000563.18	ENSMUST00000153666.2	2527	3	0	0	0	0	multi-exon	FALSE	canonical	3	4727	junction_2	168.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAAAGAAAAAAACCTA	NA	False	NA	NA	False	GATAAA	-23	NA	105866580	105860984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_105863358_105866177_105866215_105866463
ENSMUST00000153689.2	chr8	+	5297	2	FSM	ENSMUSG00000031848.16	ENSMUST00000153689.2	375	2	-4286	-636	0	0	multi-exon	FALSE	canonical	3	3671	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71130527_71130603
ENSMUST00000153696.8	chr5	-	720	5	FSM	ENSMUSG00000037339.18	ENSMUST00000153696.8	720	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.2856530261965	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACATAACGAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	33786943	33765731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33765777_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ENSMUST00000153700.9	chr9	+	1843	6	FSM	ENSMUSG00000040652.17	ENSMUST00000153700.9	1843	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	155.7934530075	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	4604	False	NA	23	True	AATAAA	-17	NA	65583829	65597582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65584048_65593477_65593554_65593554_65593636_65595079_65595256_65596102_65596189_65596376
ENSMUST00000153708.2	chr13	-	2142	5	FSM	ENSMUSG00000025871.19	ENSMUST00000153708.2	946	5	-23	-1173	0	0	multi-exon	FALSE	canonical	3	31	junction_4	214.957408572024	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713169	54699035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712994
ENSMUST00000153748.2	chr8	+	4659	5	FSM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	481.210452920549	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAGTAGATGTCTT	7188	False	NA	NA	False	AATAAA	-5	NA	20143847	20172994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_20143957_20157802_20158000_20163109_20163409_20167037_20167158_20169060
ENSMUST00000153764.8	chr7	-	1953	7	FSM	ENSMUSG00000030689.16	ENSMUST00000153764.8	719	7	-137	-1097	0	0	multi-exon	FALSE	canonical	3	53	junction_2	323.952156961487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9163	False	NA	-4	True	ATTAAA	-26	NA	126461041	126450756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126452164_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUST00000153766.8	chr4	+	1377	9	FSM	ENSMUSG00000028708.17	ENSMUST00000153766.8	1377	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	26.830195209875	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGCTTATAGCGTGTC	NA	False	NA	NA	False	TTTAAA	-12	NA	115696419	115731067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407
ENSMUST00000153799.8	chr1	-	3693	14	FSM	ENSMUSG00000070643.12	ENSMUST00000153799.8	3693	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	19.9582404271205	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352115	133310040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133311663_133312194_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316302_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
ENSMUST00000153832.8	chr5	-	2673	8	FSM	ENSMUSG00000029416.18	ENSMUST00000153832.8	2673	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	28.9418840620514	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAAGAGCTTCCTGATG	NA	False	NA	-8	True	TATAAA	-15	NA	127694482	127672730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681713_127685835_127686126_127693878
ENSMUST00000153838.8	chr9	+	8350	21	FSM	ENSMUSG00000044791.17	ENSMUST00000153838.8	8350	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	28.3608885615384	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCAGGTTTGTTTGTGTTG	NA	False	NA	39	True	AATAAA	-40	NA	110361664	110447701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110361821_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ENSMUST00000153871.2	chr14	-	1983	7	FSM	ENSMUSG00000044551.14	ENSMUST00000153871.2	1983	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.91070819942883	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGACTGTTAAATGACC	NA	False	NA	NA	False	NA	NA	NA	70396951	70391853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70392726_70393298_70393403_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
ENSMUST00000153892.2	chr11	-	1051	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	0	0	0	0	multi-exon	FALSE	canonical	3	3819	junction_1	149.312498546579	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTCTTTATTCTGAA	NA	False	NA	-51	True	AATAAA	-18	NA	115427102	115413927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ENSMUST00000153920.2	chr11	-	3791	4	FSM	ENSMUSG00000000538.19	ENSMUST00000153920.2	3791	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.8384948679264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTGTGATGTCTGA	NA	False	NA	-1	True	AATAAA	-14	NA	60130002	60117540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60129835
ENSMUST00000153924.8	chr4	-	1956	4	FSM	ENSMUSG00000073771.12	ENSMUST00000153924.8	1956	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	4.96655480858378	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAATGTCAGCATTCAA	NA	False	NA	-14	True	NA	NA	NA	116979527	116976415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116978059_116978394_116978527_116978610_116978680_116979415
ENSMUST00000153938.3	chr4	-	2178	6	FSM	ENSMUSG00000014592.22	ENSMUST00000153938.3	2178	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	486.741574143816	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTGGGCCACTAGTGT	NA	False	NA	NA	False	NA	NA	NA	151946161	151864909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_151866589_151874864_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
ENSMUST00000153939.2	chr1	+	4005	2	FSM	ENSMUSG00000026096.15	ENSMUST00000153939.2	4005	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAACAAAAAACCCT	NA	False	NA	NA	False	NA	NA	NA	53352815	53357817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_53353018_53354014
ENSMUST00000153957.8	chr2	+	2052	10	FSM	ENSMUSG00000039263.17	ENSMUST00000153957.8	2052	10	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_7	15.3389683687425	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952972	173964495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
ENSMUST00000153983.8	chr11	+	836	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	5	1755	0	0	multi-exon	FALSE	canonical	3	944	junction_3	61.9825781974258	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTCCAGTGAGAGCT	NA	False	NA	16	True	AATAAA	-16	NA	115294582	115301745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUST00000154030.8	chr2	-	2007	5	FSM	ENSMUSG00000085385.8	ENSMUST00000154030.8	2007	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	13.2193040664023	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGTCAACCCATGAATT	8347	False	NA	3	True	AATAAA	-32	NA	158203442	158197684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_158197962_158199117_158199184_158201101_158202520_158202862_158202991_158203324
ENSMUST00000154032.2	chr15	-	2456	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	18.3913022921162	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGGAAGGGGAATCCTT	NA	False	NA	-5	True	AATAAA	-26	NA	102044669	102024962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ENSMUST00000154049.8	chr9	+	3585	14	FSM	ENSMUSG00000032185.16	ENSMUST00000154049.8	3585	14	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_5	70.328224573052	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCAAAACAGCAGGGTA	NA	False	NA	20	True	AATAAA	-22	NA	21458218	21500763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803
ENSMUST00000154051.8	chrX	-	6039	30	FSM	ENSMUSG00000062949.14	ENSMUST00000154051.8	6039	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_29	20.4860673050402	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGTATTCGAGTGTCT	NA	False	NA	-7	True	AATAAA	-14	NA	59636304	59268649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59636135
ENSMUST00000154111.8	chr2	-	2293	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATGTTATCGAATTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	168072299	168050967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUST00000154111.8-0	chr2	-	1060	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	0	1233	0	0	multi-exon	FALSE	canonical	3	450	junction_3	8.66656650583148	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTGCTTTCATTTAGA	NA	False	NA	-19	True	AATAAA	-23	NA	168072299	168052200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUST00000154124.2	chr11	-	612	5	FSM	ENSMUSG00000018774.14	ENSMUST00000154124.2	612	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	48.9540600971972	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACAGTTACCTTCCTTCT	3341	False	NA	-94	True	NA	NA	NA	69556888	69555131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556845
ENSMUST00000154132.8	chr10	-	1974	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTGGAAATCCAGTACT	NA	False	NA	NA	False	AATAAA	-22	NA	14581304	14530498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUST00000154132.8-0	chr10	-	1314	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	60	600	0	0	multi-exon	FALSE	canonical	3	590	junction_6	66.3663302881692	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATTACCAGAATAG	NA	False	NA	-32	True	ATTAAA	-6	NA	14581244	14531098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUST00000154143.8	chr7	-	1158	4	FSM	ENSMUSG00000002608.9	ENSMUST00000154143.8	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	5.43650214343336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACGCAGTGTTGACGAA	NA	False	NA	NA	False	NA	NA	NA	25418428	25413558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25413908_25414175_25414446_25415159_25415613_25418342
ENSMUST00000154150.8	chr16	-	3178	23	FSM	ENSMUSG00000022680.15	ENSMUST00000154150.8	3178	23	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_15	13.5268328374224	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTAACTTTTGAATAA	9843	False	NA	NA	False	NA	NA	NA	13720846	13653455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUST00000154156.2	chr11	-	784	2	FSM	ENSMUSG00000069899.4	ENSMUST00000154156.2	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGAGAC	1787	False	NA	NA	False	AATAAA	-16	NA	45943148	45942194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_45942889_45943058
ENSMUST00000154169.4	chr5	-	3241	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_5	64.4360147743481	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTCAGTCTGCTAATCT	NA	False	NA	NA	False	NA	NA	NA	64126240	64066239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ENSMUST00000154179.2	chr2	-	599	2	FSM	ENSMUSG00000076437.12	ENSMUST00000154179.2	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	2216	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAACGTCTCCTTACCA	390	False	NA	NA	False	NA	NA	NA	84501020	84500293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_84500461_84500588
ENSMUST00000154184.5	chr9	+	1470	4	FSM	ENSMUSG00000025647.17	ENSMUST00000154184.5	1038	4	85	-517	0	0	multi-exon	FALSE	canonical	3	51	junction_1	98.8005847935909	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTCTTCAGCGCCT	NA	False	NA	18	True	AATAAA	-18	NA	108884015	108886792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108884076_108885045_108885162_108885354_108885574_108885717
ENSMUST00000154219.8	chr3	+	1945	13	FSM	ENSMUSG00000027810.15	ENSMUST00000154219.8	1945	13	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	220.750408958977	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTCAAGTTTGTC	NA	False	NA	5	True	AATAAA	-16	NA	58433476	58464922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUST00000154232.9	chr17	-	4520	14	FSM	ENSMUSG00000024335.21	ENSMUST00000154232.9	4520	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	158.425425309877	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGAGTTAGTTTTCTTA	8283	False	NA	-16	True	AATAAA	-16	NA	34339385	34331003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34335881_34336186_34337579_34338875_34339168
ENSMUST00000154233.2	chr3	+	641	3	FSM	ENSMUSG00000002428.13	ENSMUST00000154233.2	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	21.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAATTTTCTTCTCTGC	6980	False	NA	NA	False	NA	NA	NA	20112016	20118259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_20112172_20113062_20113271_20117981
ENSMUST00000154237.8	chr1	+	2420	9	FSM	ENSMUSG00000026456.19	ENSMUST00000154237.8	2420	9	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_5	130.869925880624	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCATTGTCGTCGTGTC	7971	False	NA	39	True	AATAAA	-27	NA	134333518	134339474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134335554_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUST00000154241.8	chr5	-	1724	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_7	57.209960599853	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTTTAGCAGTTTTG	NA	False	NA	NA	False	TTTAAA	-13	NA	31311595	31297997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUST00000154256.3	chr8	+	3152	2	FSM	ENSMUSG00000085795.9	ENSMUST00000154256.3	3152	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCGTGGTGTGTTTCTCT	NA	False	NA	5	True	AATAAA	-21	NA	27467381	27471489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_27467640_27468595
ENSMUST00000154269.7	chr2	+	1815	6	FSM	ENSMUSG00000026730.13	ENSMUST00000154269.7	1232	6	51	-634	0	0	multi-exon	FALSE	canonical	3	36	junction_1	7.33212111192934	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTGTTTTCCACTTAT	4763	False	NA	NA	False	AATAAA	-39	NA	12928902	13006425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_12929010_12979179_12979265_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ENSMUST00000154276.8	chr16	-	3501	8	FSM	ENSMUSG00000022973.19	ENSMUST00000154276.8	3501	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.4242156229621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCACCAGCTGACTTCTT	2356	False	NA	-25	True	AATAAA	-8	NA	90747307	90732993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90735923_90737360_90737385_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90746586_90746626_90747238
ENSMUST00000154288.3	chr14	+	935	4	FSM	ENSMUSG00000035960.15	ENSMUST00000154288.3	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_2	68.6310587286997	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTGACCTCCGTAAC	189	False	NA	NA	False	NA	NA	NA	51162434	51164119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUST00000154330.2	chr11	-	652	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	0	343	0	0	multi-exon	FALSE	canonical	3	1753	junction_3	448.803099612984	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGGGTCTCTCTCTC	NA	False	NA	-25	True	AATAAA	-18	NA	5657687	5654325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
ENSMUST00000154340.8	chr2	+	1417	4	FSM	ENSMUSG00000038900.18	ENSMUST00000154340.8	1417	4	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_3	1756.95310757636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5811	False	NA	24	True	AATAAA	-23	NA	32851740	32854057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32852135_32852585_32852685_32852996_32853866_32854002
ENSMUST00000154349.9	chr4	+	3603	19	FSM	ENSMUSG00000045751.17	ENSMUST00000154349.9	3603	19	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	38.2571303771122	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCTCTGTGAATATTT	8695	False	NA	NA	False	ATTAAA	-22	NA	24505161	24602949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ENSMUST00000154356.8	chr9	+	3548	15	FSM	ENSMUSG00000006932.18	ENSMUST00000154356.8	3548	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_10	170.570232108749	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTCATTTTGTTTGT	NA	False	NA	26	True	ATTAAA	-15	NA	120762540	120789572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785043_120786175_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUST00000154396.8	chr11	+	2789	15	FSM	ENSMUSG00000059439.16	ENSMUST00000154396.8	2789	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_14	18.1017532130939	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3797	False	NA	14	True	AATAAA	-22	NA	85356984	85716884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
ENSMUST00000154429.9	chr9	+	570	4	FSM	ENSMUSG00000084786.10	ENSMUST00000154429.9	2511	4	1943	-2	0	0	multi-exon	FALSE	canonical	3	1046	junction_3	4.78423336480244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	False	NA	18	True	AATAAA	-15	NA	20556116	20558073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20556190_20556488_20556786_20556917_20556956_20557911
ENSMUST00000154447.2	chr4	+	677	2	FSM	ENSMUSG00000028676.18	ENSMUST00000154447.2	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	1724	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTCCCCTAATTTGCT	4686	False	NA	NA	False	AAAACA	-31	NA	135583422	135586112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135583603_135585615
ENSMUST00000154460.8	chr14	-	3131	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	228	3373	0	1199	multi-exon	FALSE	canonical	3	207	junction_8	42.1092329543059	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATGATTTTTAAAG	NA	False	NA	-16	True	AATAAA	-9	NA	21102290	21084882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ENSMUST00000154467.8	chr19	+	3605	2	FSM	ENSMUSG00000024843.16	ENSMUST00000154467.8	3605	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	5779	False	NA	NA	False	NA	NA	NA	3901831	3917670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3902414_3914647
ENSMUST00000154469.8	chr5	+	1473	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_3	34.8926926447358	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038309	135041024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUST00000154473.9	chr17	-	616	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	48	198	0	0	multi-exon	FALSE	canonical	3	219	junction_4	17.0934929139717	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784682	27782744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
ENSMUST00000154478.3	chr7	+	395	1	FSM	ENSMUSG00000056836.9	ENSMUST00000154478.3	395	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCACATGAAAGACTAAAAA	NA	False	NA	NA	False	AATAAA	-1	NA	39840360	39840755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_39840400_39840800
ENSMUST00000154490.8	chr2	+	860	3	FSM	ENSMUSG00000019715.15	ENSMUST00000154490.8	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_2	57.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGATAGGAAGACAAAAAA	NA	False	NA	NA	False	AATAAA	-41	NA	29825439	29828967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29825611_29826021_29826250_29828506
ENSMUST00000154494.8	chr4	-	2071	5	FSM	ENSMUSG00000041936.19	ENSMUST00000154494.8	2071	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	246.491379159597	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	2116	False	NA	-21	True	AATAAA	-18	NA	156253543	156249746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253002_156253027_156253189
ENSMUST00000154508.8	chr7	-	709	3	FSM	ENSMUSG00000044702.14	ENSMUST00000154508.8	709	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	22.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121711263	121706487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121706952_121709904_121710054_121711167
ENSMUST00000154516.3	chr7	-	905	7	FSM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	22.056115302161	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTATGAAGATGGGGAG	NA	False	NA	-69	True	NA	NA	NA	100164003	100152287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956_100161061_100163899
ENSMUST00000154553.2	chr17	+	1049	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_5	48.6457414710199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2923	False	NA	NA	False	AATAAA	-19	NA	8529933	8546274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ENSMUST00000154584.9	chr15	-	971	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	58	1283	0	0	multi-exon	FALSE	canonical	3	2715	junction_5	241.1927842695	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781146	75767336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ENSMUST00000154596.2	chr2	+	826	3	FSM	ENSMUSG00000027602.10	ENSMUST00000154596.2	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_2	23	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCTTTGCCTCCAGCTG	NA	False	NA	6	True	AATAAA	-18	NA	155118808	155119988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155118934_155119017_155119125_155119394
ENSMUST00000154597.2	chr7	-	1350	5	FSM	ENSMUSG00000030493.14	ENSMUST00000154597.2	831	5	-128	-391	0	0	multi-exon	FALSE	canonical	3	12	junction_4	59.3316947339278	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAGAAAAATTA	NA	False	NA	NA	False	AATAAA	-4	NA	35096261	35091729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637_35095757_35096110
ENSMUST00000154617.8	chr11	-	5531	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACAGTTATAAAACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86435631	86389696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ENSMUST00000154617.8-0	chr11	-	2369	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	0	3162	0	0	multi-exon	FALSE	canonical	3	211	junction_9	22.8179351227342	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGTGGCTTGTCTG	NA	False	NA	-4	True	AATAAA	-21	NA	86435631	86392858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ENSMUST00000154649.8	chr2	-	1048	6	FSM	ENSMUSG00000027422.16	ENSMUST00000154649.8	1048	6	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_3	27.1558465159899	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	NA	False	NA	-1	True	ATTAAA	-20	NA	143794201	143789314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111
ENSMUST00000154665.2	chr18	-	1515	6	FSM	ENSMUSG00000025420.14	ENSMUST00000154665.2	1515	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	10.4192130221049	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTGCTTTTTTTCT	NA	False	NA	NA	False	NA	NA	NA	77134983	77097736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_77098742_77099685_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77134869
ENSMUST00000154672.2	chr5	-	3544	12	FSM	ENSMUSG00000049550.18	ENSMUST00000154672.2	3544	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	10.1297369288612	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTGCTTTGACCTCCA	NA	False	NA	NA	False	AAGAAA	-22	NA	123755885	123717513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123751130_123753399_123755398_123755615_123755719
ENSMUST00000154673.2	chr6	+	1747	2	FSM	ENSMUSG00000085355.3	ENSMUST00000154673.2	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCAGTAATTCCGTCTTG	NA	False	NA	NA	False	AATAAA	-20	NA	148846364	148848627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_148847919_148848434
ENSMUST00000154679.8	chr3	-	2406	15	FSM	ENSMUSG00000028099.9	ENSMUST00000154679.8	2406	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	52.4860039652944	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTATCTGTTCTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	96634757	96618838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634428
ENSMUST00000154689.8	chr4	+	4550	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_5	63.7427555796648	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTGCTGATACTGAAAT	NA	False	NA	NA	False	NA	NA	NA	124978926	125007031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ENSMUST00000154689.8-0	chr4	+	1171	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	30	3349	0	0	multi-exon	FALSE	canonical	3	173	junction_5	63.7427555796648	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCAGCTGCCTCTTT	NA	False	NA	40	True	ACTAAA	-16	NA	124978956	125003682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ENSMUST00000154694.2	chrX	+	630	2	FSM	ENSMUSG00000044150.13	ENSMUST00000154694.2	630	2	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATACTTTTAAAAATGCT	NA	False	NA	NA	False	AATAAA	-31	NA	158350533	158358093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_158351011_158357940
ENSMUST00000154704.8	chr2	+	7739	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTGTGTATACATATGT	NA	False	NA	5	True	NA	NA	NA	70886087	70926202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ENSMUST00000154704.8-0	chr2	+	2479	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	40	5220	0	360	multi-exon	FALSE	canonical	3	168	junction_11	23.2697075602773	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCTTATGCGGTCTTA	NA	False	NA	31	True	NA	NA	NA	70886127	70920982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ENSMUST00000154706.8	chr2	-	4096	5	FSM	ENSMUSG00000009207.16	ENSMUST00000154706.8	4096	5	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	34.6914975174033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGAAAAAGTATT	NA	False	NA	NA	False	AATGAA	-6	NA	74409260	74381711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ENSMUST00000154781.8	chr5	+	955	4	FSM	ENSMUSG00000079109.12	ENSMUST00000154781.8	955	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	13.490737563232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAACAAAGCA	NA	False	NA	NA	False	AATGAA	-5	NA	143846842	143851109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436
ENSMUST00000154784.8	chr2	-	1477	14	FSM	ENSMUSG00000026761.13	ENSMUST00000154784.8	1477	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	114.388107132055	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGCACTTAGTATGTT	NA	False	NA	NA	False	TATAAA	-12	NA	48839243	48795327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800255_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUST00000154785.2	chr19	+	604	4	FSM	ENSMUSG00000024829.13	ENSMUST00000154785.2	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	1715	junction_3	65.0589476295664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGAGCCTGTGACTTGCT	NA	False	NA	7	True	NA	NA	NA	3336810	3341195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3337039_3337702_3337756_3338983_3339088_3340976
ENSMUST00000154811.8	chr4	-	1017	5	FSM	ENSMUSG00000028693.16	ENSMUST00000154811.8	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	71.8487995724355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGGAATGTATTTCT	NA	False	NA	NA	False	GATAAA	-8	NA	116484690	116468663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ENSMUST00000154814.2	chr15	-	421	4	FSM	ENSMUSG00000064284.13	ENSMUST00000154814.2	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	119.678272417715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGCCCTCCCCCCAA	8123	False	NA	NA	False	NA	NA	NA	85695860	85692428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85692569_85693412_85693526_85695102_85695250_85695839
ENSMUST00000154824.8	chr4	-	2808	13	FSM	ENSMUSG00000028649.22	ENSMUST00000154824.8	2808	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	98.1957724254065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAATTCTTGGCTT	NA	False	NA	-8	True	ATTAAA	-18	NA	123266160	123243508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123262613_123262629_123263597_123263762_123264378_123264500_123265564_123265754_123266142
ENSMUST00000154827.8	chrX	+	4168	27	FSM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	235.310423828037	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
ENSMUST00000154853.8	chr7	-	883	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	23.5902522241709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGTTGAGAGCATTAG	NA	False	NA	NA	False	AATAAA	-22	NA	97228703	97199546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
ENSMUST00000154858.2	chr4	-	771	5	FSM	ENSMUSG00000040044.12	ENSMUST00000154858.2	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	24.963723680573	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGATTGCAAATGA	4	True	NA	NA	False	NA	NA	NA	34614904	34599375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUST00000154870.2	chr6	-	783	2	FSM	ENSMUSG00000030243.17	ENSMUST00000154870.2	783	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGCAGGCGCTAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	142309943	142308483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142308596_142309272
ENSMUST00000154890.2	chr11	+	2716	3	FSM	ENSMUSG00000018599.6	ENSMUST00000154890.2	716	3	-45	-1955	0	0	multi-exon	FALSE	canonical	3	114	junction_2	20.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619223	60623777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_60619394_60621108_60621619_60621741
ENSMUST00000154891.8	chr7	+	1722	9	FSM	ENSMUSG00000030815.12	ENSMUST00000154891.8	1722	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	40.5768945953236	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCATGTCTGCTGTCTA	NA	False	NA	24	True	AATAAA	-25	NA	127172754	127182477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127173139_127176706_127176819_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUST00000154902.2	chr16	+	2009	7	FSM	ENSMUSG00000022793.18	ENSMUST00000154902.2	2009	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	9.26312882106017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTGGTCTTGTTTTTT	3944	False	NA	7	True	AGTAAA	-17	NA	38562657	38589210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583492_38586276_38586382_38588259
ENSMUST00000154909.2	chr7	-	959	5	FSM	ENSMUSG00000030751.19	ENSMUST00000154909.2	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	2548	junction_1	245.338923736125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	113875289	113869723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUST00000154914.2	chr7	-	811	3	FSM	ENSMUSG00000030960.17	ENSMUST00000154914.2	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	20.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAGTCTTGAAAGAGTAA	NA	False	NA	NA	False	CATAAA	-11	NA	132454368	132451834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132452439_132453154_132453221_132454227
ENSMUST00000154915.9	chr11	-	2528	13	FSM	ENSMUSG00000020530.15	ENSMUST00000154915.9	2528	13	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_7	87.5523256242929	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTGCCTATGATTTAAG	NA	False	NA	NA	False	NA	NA	NA	84761028	84723631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUST00000154924.8	chr11	+	3368	27	FSM	ENSMUSG00000020464.16	ENSMUST00000154924.8	3368	27	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_10	52.7864403424181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080743	29111680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUST00000154927.2	chr11	+	390	2	FSM	ENSMUSG00000034394.15	ENSMUST00000154927.2	390	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGTAAATGCCACCTGT	NA	False	NA	NA	False	NA	NA	NA	4216795	4218249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4217120_4218183
ENSMUST00000154948.8	chr15	+	1538	9	FSM	ENSMUSG00000023051.12	ENSMUST00000154948.8	951	9	-130	-457	0	0	multi-exon	FALSE	canonical	3	32	junction_3	117.676463237132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426861	102432111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429572_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUST00000154972.9	chr11	-	1049	5	FSM	ENSMUSG00000014195.17	ENSMUST00000154972.9	1049	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	1222.31570696772	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTCCTTTTGTTTTG	5930	False	NA	NA	False	NA	NA	NA	100510446	100488252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100488881_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUST00000154977.2	chrX	-	372	2	FSM	ENSMUSG00000031150.14	ENSMUST00000154977.2	372	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGTGTTAGCACTCAA	NA	False	NA	NA	False	NA	NA	NA	7617144	7604698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7604763_7616836
ENSMUST00000154992.2	chr18	+	717	1	FSM	ENSMUSG00000085939.4	ENSMUST00000154992.2	717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGGGGGGCGTTTGGTCT	NA	False	NA	NA	False	NA	NA	NA	50267861	50268578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_50267900_50268600
ENSMUST00000155008.2	chr9	+	481	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	779	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTACACAAAGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	88272889	88273370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_88272900_88273400
ENSMUST00000155014.2	chr9	+	5150	27	FSM	ENSMUSG00000044037.16	ENSMUST00000155014.2	5150	27	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	6.10945527743532	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGCATGTGTGT	NA	False	NA	1	True	AATAAA	-14	NA	110709404	110729595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110709526_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ENSMUST00000155023.9	chr4	-	4898	15	FSM	ENSMUSG00000040606.15	ENSMUST00000155023.9	4898	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	101.671866154541	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTTTCTTGTTGGCTT	5108	False	NA	NA	False	AATAAA	-19	NA	142205043	141829700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_142204644
ENSMUST00000155037.4	chr6	+	478	3	FSM	ENSMUSG00000029629.18	ENSMUST00000155037.4	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	44	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGACAAACAGTTAATTAA	35	False	NA	NA	False	AGTAAA	-41	NA	11907807	11933409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_11908017_11926725_11926837_11933251
ENSMUST00000155079.2	chr6	-	369	2	FSM	ENSMUSG00000030082.15	ENSMUST00000155079.2	369	2	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCATCTTTAGTGGAT	9207	False	NA	NA	False	NA	NA	NA	88495775	88495159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88495421_88495667
ENSMUST00000155084.8	chr1	-	4131	12	FSM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	17.2564516621159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGTATTTATTTTTTG	NA	False	NA	NA	False	CATAAA	-19	NA	75482285	75467177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ENSMUST00000155086.2	chr5	-	902	2	FSM	ENSMUSG00000066551.13	ENSMUST00000155086.2	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	8298	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTCCTCATAAACT	9357	False	NA	NA	False	NA	NA	NA	148987257	148985962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148986712_148987104
ENSMUST00000155089.2	chr11	-	3413	2	FSM	ENSMUSG00000034520.15	ENSMUST00000155089.2	3413	2	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAATAAAGAGCAG	1119	False	NA	3	True	NA	NA	NA	102696614	102691556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102692022_102693666
ENSMUST00000155108.8	chr9	+	1793	9	FSM	ENSMUSG00000037286.16	ENSMUST00000155108.8	1793	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	140.94009143959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATGGTTCTCAAGTT	NA	False	NA	0	True	AATAAA	-15	NA	100525688	100839452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100835545_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUST00000155110.2	chr2	+	986	2	FSM	ENSMUSG00000027160.17	ENSMUST00000155110.2	986	2	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTACTCTGTTATT	NA	False	NA	33	True	AATAAA	-19	NA	109871239	109875009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_109871748_109874531
ENSMUST00000155133.2	chr4	+	683	3	FSM	ENSMUSG00000028292.15	ENSMUST00000155133.2	683	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATTCCTTACTAGAAGA	9	True	NA	NA	False	NA	NA	NA	34614977	34623435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_34615562_34618553_34618628_34623410
ENSMUST00000155203.2	chr3	+	7414	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTCTGGCTTTGTGAAT	NA	False	NA	NA	False	TATAAA	-16	NA	9315661	9350393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ENSMUST00000155203.2-0	chr3	+	5455	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	-63	2022	-63	-2022	multi-exon	FALSE	canonical	3	53	junction_5	6.07947366142827	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAATTGTTGTGCTTTTGT	NA	False	NA	NA	False	AGTAAA	-25	NA	9315598	9348371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ENSMUST00000155213.8	chr2	+	1324	4	FSM	ENSMUSG00000026848.15	ENSMUST00000155213.8	1324	4	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	37.4788829431544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGGATGAGAAGATCTAC	NA	False	NA	NA	False	NA	NA	NA	30843183	30846997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30844030_30845789_30845966_30846459_30846588_30846823
ENSMUST00000155248.2	chr7	+	684	11	FSM	ENSMUSG00000053367.16	ENSMUST00000155248.2	684	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.3304963254654	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGATTCAGTGCGTA	3212	False	NA	6	True	AATAAA	-21	NA	6263534	6284858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6263544_6266905_6266933_6269828_6269847_6271800_6271807_6272881_6272891_6274395_6274405_6275974_6276002_6277345_6277373_6280418_6280541_6282412_6282451_6284466
ENSMUST00000155266.2	chr5	-	700	4	FSM	ENSMUSG00000029499.12	ENSMUST00000155266.2	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	226.6686274425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTAATGGGTGTGGTT	NA	False	NA	-9	True	AATAAA	-15	NA	110433887	110422160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110422495_110425520_110425641_110431511_110431620_110433749
ENSMUST00000155277.8	chr6	+	4006	10	FSM	ENSMUSG00000030204.11	ENSMUST00000155277.8	4006	10	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_5	26.0389072612125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGTGTGTG	6594	False	NA	16	True	ATTAAA	-16	NA	134988594	135000735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134998542_135000241
ENSMUST00000155278.2	chr11	+	5281	9	FSM	ENSMUSG00000020300.15	ENSMUST00000155278.2	5281	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	10.3802697460133	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTACTATACTTAT	537	False	NA	3	True	AATAAA	-14	NA	31823274	31885634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_31823413_31839857_31839940_31858824_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ENSMUST00000155285.8	chr10	-	2769	10	FSM	ENSMUSG00000020184.16	ENSMUST00000155285.8	2769	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	165.020836694067	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117545927	117524799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850
ENSMUST00000155295.8	chr3	-	1034	6	FSM	ENSMUSG00000028041.18	ENSMUST00000155295.8	1034	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	16.0549057923116	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGGTTTTGATTTGCT	NA	False	NA	NA	False	ATTAAA	-24	NA	89257267	89253834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUST00000155296.8	chr8	-	769	4	FSM	ENSMUSG00000031516.12	ENSMUST00000155296.8	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_2	17.326921891156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCCTCAATTTCCATT	NA	False	NA	0	True	AATAAA	-31	NA	34562192	34557573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037
ENSMUST00000155310.2	chr2	+	932	3	FSM	ENSMUSG00000026955.14	ENSMUST00000155310.2	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGAATCCCTGTAGGAG	6696	False	NA	NA	False	NA	NA	NA	25262371	25265154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_25263011_25263427_25263530_25264963
ENSMUST00000155312.2	chr14	-	2419	8	FSM	ENSMUSG00000048922.19	ENSMUST00000155312.2	2419	8	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_7	40.1842694372323	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAATGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	67952824	67936384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ENSMUST00000155320.8	chr7	+	1449	4	FSM	ENSMUSG00000031074.15	ENSMUST00000155320.8	599	4	-225	-625	-225	625	multi-exon	FALSE	canonical	3	7	junction_1	23.9768406778059	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCTGGGATACAGACTT	NA	False	NA	9	True	ATTAAA	-24	NA	144391594	144397081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_144391847_144392341_144392665_144394407_144394512_144396311
ENSMUST00000155325.2	chr11	-	648	4	FSM	ENSMUSG00000025134.3	ENSMUST00000155325.2	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	2034.47459774972	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	7014	False	NA	-7	True	AATAAA	-19	NA	120486483	120485334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433
ENSMUST00000155338.2	chr7	-	1287	1	FSM	ENSMUSG00000048574.10	ENSMUST00000155338.2	1287	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	987	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATACCTCCAATGGACTGC	NA	False	NA	NA	False	NA	NA	NA	41756609	41755322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_41755300_41756600
ENSMUST00000155346.8	chr4	+	1483	14	FSM	ENSMUSG00000028687.18	ENSMUST00000155346.8	1483	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	50.6509110766964	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTCCCTACCCAAAAT	3020	False	NA	-22	True	NA	NA	NA	116671515	116676580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116671634_116672760_116672910_116672995_116673036_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUST00000155371.2	chr11	-	703	3	FSM	ENSMUSG00000018446.9	ENSMUST00000155371.2	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	5159	junction_2	90	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAAGTTGAGGTTCTTT	NA	False	NA	-38	True	AATAAA	-20	NA	70869697	70868673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70869071_70869253_70869377_70869514
ENSMUST00000155377.2	chrX	+	526	2	FSM	ENSMUSG00000031231.5	ENSMUST00000155377.2	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	9427	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105062996	105065564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_105063310_105065351
ENSMUST00000155381.2	chr11	+	677	3	FSM	ENSMUSG00000017639.14	ENSMUST00000155381.2	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTACTCAGATCTGGGA	NA	False	NA	NA	False	NA	NA	NA	79551387	79574324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_79551683_79571613_79571838_79574166
ENSMUST00000155384.2	chr11	+	625	2	FSM	ENSMUSG00000054418.7	ENSMUST00000155384.2	1784	2	99	1060	99	-1060	multi-exon	FALSE	canonical	3	27	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCGGTCTCAGAGCTTTC	NA	False	NA	NA	False	NA	NA	NA	117502171	117503623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117502261_117503087
ENSMUST00000155398.8	chr4	-	1216	7	FSM	ENSMUSG00000028693.16	ENSMUST00000155398.8	1216	7	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_5	157.395114988434	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTTATATGAACTTTT	767	False	NA	NA	False	NA	NA	NA	116463445	116459922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880
ENSMUST00000155399.2	chr11	-	696	4	FSM	ENSMUSG00000020737.13	ENSMUST00000155399.2	696	4	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_1	143.613679323694	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGGTGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	115405197	115391207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115391511_115392830_115392929_115393857_115394001_115405045
ENSMUST00000155460.2	chr11	+	1056	2	FSM	ENSMUSG00000020691.14	ENSMUST00000155460.2	1056	2	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	105028388	105031220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_105028611_105030386
ENSMUST00000155474.2	chr2	-	770	3	FSM	ENSMUSG00000018770.10	ENSMUST00000155474.2	770	3	0	0	0	0	multi-exon	FALSE	canonical	3	2058	junction_2	1124.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAGTGTAATCAGCAG	NA	False	NA	NA	False	NA	NA	NA	73741635	73739661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73740286_73741298_73741405_73741595
ENSMUST00000155480.9	chr12	-	1544	7	FSM	ENSMUSG00000076432.14	ENSMUST00000155480.9	1970	7	82	344	-70	-344	multi-exon	FALSE	canonical	2	21	junction_1	1514.35583114846	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467507	21440676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21441417_21441717_21441801_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ENSMUST00000155487.8	chr13	-	3832	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTCTGAAGACTTCTAC	NA	False	NA	NA	False	TATAAA	-15	NA	65260789	65212476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ENSMUST00000155487.8-0	chr13	-	3349	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	0	483	0	0	multi-exon	FALSE	canonical	3	418	junction_6	41.7491525128019	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGCTTAAAAACAATTT	NA	False	NA	-15	True	AATAAA	-17	NA	65260789	65212959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ENSMUST00000155490.3	chr11	-	729	4	FSM	ENSMUSG00000020935.9	ENSMUST00000155490.3	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	518.074211758208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTCCAGATGACCCC	5978	False	NA	NA	False	NA	NA	NA	102919130	102890469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102890674_102890975_102891183_102918085_102918248_102918974
ENSMUST00000155507.2	chr11	+	3113	3	FSM	ENSMUSG00000017715.12	ENSMUST00000155507.2	3113	3	0	0	0	0	multi-exon	FALSE	canonical	1	116	junction_2	125.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117903168	117914837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117905549_117910432_117910559_117914230
ENSMUST00000155512.8	chr2	+	2281	3	FSM	ENSMUSG00000027510.18	ENSMUST00000155512.8	2281	3	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_2	26	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGGTGGTTTGAGGTT	NA	False	NA	NA	False	AATAAA	-17	NA	172863705	172876521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172864709_172865119_172865175_172875298
ENSMUST00000155517.2	chr2	+	1490	4	FSM	ENSMUSG00000026960.7	ENSMUST00000155517.2	582	4	0	-908	0	-778	multi-exon	FALSE	canonical	3	23	junction_1	228.30583776057	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATCAAGGGTTCTTGTT	NA	False	NA	7	True	AATATA	-19	NA	53081737	53108454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_53081893_53084295_53084350_53092930_53093064_53107306
ENSMUST00000155551.8	chr4	+	7250	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGAATGTAGTGGAAAAT	2	True	NA	50	True	NA	NA	NA	45342100	45379759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ENSMUST00000155551.8-0	chr4	+	2202	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	0	5048	0	-245	multi-exon	FALSE	canonical	3	56	junction_4	12.6315302143309	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGGTGATTGAAAAAGTT	2	True	NA	10	True	AATAAA	-23	NA	45342100	45374711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ENSMUST00000155571.2	chr11	+	3358	3	FSM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	36	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAATGCCTGCGTGTGT	NA	False	NA	2	True	TTTAAA	-17	NA	78006431	78047526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78006664_78033918_78034041_78044522
ENSMUST00000155573.3	chr6	-	3697	2	FSM	ENSMUSG00000048668.17	ENSMUST00000155573.3	3697	2	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCCAGAGCTGTGGA	763	False	NA	NA	False	NA	NA	NA	128339542	128334933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128335157_128336068
ENSMUST00000155576.8	chr18	+	3960	23	FSM	ENSMUSG00000036452.19	ENSMUST00000155576.8	2280	23	-331	-1349	0	0	multi-exon	FALSE	canonical	2	6	junction_21	7.92227219263608	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTATATGGTAAAGTT	NA	False	NA	NA	False	GATAAA	-21	NA	39126197	39505564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39490605_39490717_39496169_39496262_39504126
ENSMUST00000155579.8	chr1	-	3350	4	FSM	ENSMUSG00000016262.15	ENSMUST00000155579.8	3350	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.69967317119759	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTTTTTTAAAATTTC	NA	False	NA	NA	False	ATTAAA	-15	NA	192538064	192526795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_192529524_192532058_192532175_192533259_192533452_192537750
ENSMUST00000155587.8	chr1	-	3252	10	FSM	ENSMUSG00000026103.15	ENSMUST00000155587.8	3252	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	70.6053192834018	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52251368	52224438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361
ENSMUST00000155592.8	chr7	-	1091	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	68.2800117164606	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTCTAGGTCACCGTT	NA	False	NA	-1	True	AATAAA	-16	NA	3632883	3623322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUST00000155597.2	chrX	-	1310	11	FSM	ENSMUSG00000031387.15	ENSMUST00000155597.2	1310	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	617.352095647208	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACCCTGTTCCACATG	NA	False	NA	-20	True	NA	NA	NA	72974362	72965744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974315
ENSMUST00000155599.2	chrX	-	2326	2	FSM	ENSMUSG00000031167.17	ENSMUST00000155599.2	2326	2	0	0	0	0	multi-exon	FALSE	canonical	2	63	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTTACACGTATGT	9340	False	NA	0	True	ATTAAA	-19	NA	8009157	8005213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8007448_8009065
ENSMUST00000155611.8	chr16	-	1468	7	FSM	ENSMUSG00000003166.21	ENSMUST00000155611.8	1468	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	165.862392763801	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTACGTGTGCATTTG	NA	False	NA	69	True	NA	NA	NA	17709513	17667174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ENSMUST00000155633.8	chr16	+	6213	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_9	19.0952376045325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTGTGGCCTGCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	10363227	10562742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ENSMUST00000155633.8-0	chr16	+	3755	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	45	2413	0	0	multi-exon	FALSE	canonical	3	10	junction_9	19.0952376045325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCGGAGTCTCATTAG	NA	False	NA	NA	False	AAAAAG	-18	NA	10363272	10560329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ENSMUST00000155634.8	chr5	-	3164	14	FSM	ENSMUSG00000005107.14	ENSMUST00000155634.8	3164	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	4.2090350831706	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATTATTCTGCCTTGGC	NA	False	NA	NA	False	NA	NA	NA	38660486	38506981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38508681_38520185_38520314_38537260_38537337_38539385_38539488_38549056_38549168_38556044_38556233_38574517_38574651_38593882_38594029_38597992_38598118_38610444_38610606_38634737_38634837_38640659_38640729_38659301_38659364_38660421
ENSMUST00000155635.2	chr3	+	2573	4	FSM	ENSMUSG00000002428.13	ENSMUST00000155635.2	2573	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	12.8322510366134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	NA	False	NA	16	True	AATAAA	-20	NA	20162639	20172654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUST00000155671.8	chr5	+	2716	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTGTATGGGTGTTT	679	False	NA	11	True	AATAAA	-24	NA	122492431	122503047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ENSMUST00000155671.8-0	chr5	+	965	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	53	1698	0	0	multi-exon	FALSE	canonical	3	1453	junction_1	367.656844837078	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCTTGAAAACCTGT	732	False	NA	17	True	AATAAA	-17	NA	122492484	122501349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ENSMUST00000155672.8	chr7	+	1938	8	FSM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_3	92.005767343628	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACTGCAGTCTTTA	NA	False	NA	17	True	AATAAA	-31	NA	138448323	138484783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUST00000155674.2	chr2	-	464	2	FSM	ENSMUSG00000087445.2	ENSMUST00000155674.2	464	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTGCTGGTCCCTTT	NA	False	NA	NA	False	NA	NA	NA	157387389	157386185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_157386353_157387092
ENSMUST00000155676.8	chrX	-	2442	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	0	0	0	0	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	-6	True	AATAAA	-20	NA	73412279	73409323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ENSMUST00000155676.8-0	chrX	-	644	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	115	1683	0	64	multi-exon	FALSE	canonical	3	1598	junction_1	83.5636816379513	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGCTCATAGTGATAAT	NA	False	NA	-1	True	ATTAAA	-18	NA	73412164	73411006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ENSMUST00000155679.8	chr9	+	3088	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	100.813138473559	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCCACAGTTGTCTA	NA	False	NA	27	True	ATTAAA	-16	NA	13660476	13717777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUST00000155711.2	chr8	+	678	4	FSM	ENSMUSG00000003573.16	ENSMUST00000155711.2	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	13.6707311029399	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGCGTTTGTGTGCATT	NA	False	NA	NA	False	NA	NA	NA	70735683	70738952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580
ENSMUST00000155735.2	chr15	+	2286	6	FSM	ENSMUSG00000033728.15	ENSMUST00000155735.2	2286	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.9886942628294	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGTGTTGCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	76594930	76599291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76595037_76595163_76595284_76595621_76595731_76597066_76597421_76597600_76598186_76598279
ENSMUST00000155737.8	chr3	-	5997	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_8	7.61253028131584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTGTACCTTGTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	32670734	32634480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ENSMUST00000155737.8-0	chr3	-	1287	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	68	4642	0	81	multi-exon	FALSE	canonical	3	60	junction_8	7.61253028131584	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGCTGTAGTTTATTGA	NA	False	NA	NA	False	TATAAA	-12	NA	32670666	32639122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ENSMUST00000155756.8	chr5	-	871	5	FSM	ENSMUSG00000029346.13	ENSMUST00000155756.8	871	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	40.1154583670684	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGTTTACAGTGCTGT	NA	False	NA	-7	True	AATAGA	-14	NA	112487888	112485257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_112485608_112485867_112485914_112486183_112486434_112487584_112487684_112487762
ENSMUST00000155757.8	chr4	+	2950	7	FSM	ENSMUSG00000028646.17	ENSMUST00000155757.8	2950	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	186.947779399014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	16	True	AATAAA	-16	NA	123811266	123830786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_123811561_123813641_123814235_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ENSMUST00000155758.2	chr6	+	408	3	FSM	ENSMUSG00000085412.8	ENSMUST00000155758.2	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	88.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCCAGAGAAGTTGCCAA	832	False	NA	NA	False	CATAAA	-25	NA	52079982	52089168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_52080017_52083750_52083877_52088920
ENSMUST00000155759.3	chr11	+	589	2	FSM	ENSMUSG00000048497.12	ENSMUST00000155759.3	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAACAGGACAGACGC	NA	False	NA	NA	False	NA	NA	NA	62539660	62556062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_62539683_62555495
ENSMUST00000155778.8	chr9	-	2339	6	FSM	ENSMUSG00000025786.18	ENSMUST00000155778.8	1633	6	-38	-668	0	0	multi-exon	FALSE	canonical	3	7	junction_4	109.405667129267	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8714	False	NA	-1	True	AATAAA	-16	NA	122942269	122905896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122929327_122929658_122942060
ENSMUST00000155805.2	chr7	+	518	4	FSM	ENSMUSG00000037563.16	ENSMUST00000155805.2	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	19383	junction_2	895.518844022838	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050348	28052121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28050519_28051601_28051699_28051787_28051836_28051918
ENSMUST00000155816.8	chr4	-	332	4	FSM	ENSMUSG00000085241.8	ENSMUST00000155816.8	332	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	450.988790203137	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAACCTGAAAAGGTAAGA	NA	False	NA	NA	False	NA	NA	NA	132080974	132075324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132075432_132079432_132079555_132079973_132080010_132080907
ENSMUST00000155824.2	chr11	+	2853	4	FSM	ENSMUSG00000071866.13	ENSMUST00000155824.2	2853	4	0	0	0	0	multi-exon	FALSE	canonical	3	36680	junction_3	513.872444181325	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTTGTTTGTAT	NA	False	NA	-3	True	AATAAA	-14	NA	6365875	6369812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUST00000155837.8	chr2	-	2120	18	FSM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_15	717.627699835322	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022096	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ENSMUST00000155837.8-0	chr2	-	2847	18	FSM	ENSMUSG00000027620.17	ENSMUST00000155837.8	2120	18	-36	-691	0	0	multi-exon	FALSE	canonical	3	383	junction_15	717.627699835322	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022132	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
ENSMUST00000155844.2	chr2	+	954	6	FSM	ENSMUSG00000027099.10	ENSMUST00000155844.2	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	792	junction_1	50.8527285403645	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATAACTTTGACCCT	NA	False	NA	NA	False	NA	NA	NA	74656173	74699158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663
ENSMUST00000155849.2	chrX	+	3321	4	FSM	ENSMUSG00000031381.17	ENSMUST00000155849.2	3321	4	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	22.7596133534821	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGGGAACTCCTTGCAC	NA	False	NA	11	True	GATAAA	-18	NA	163208505	163215051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_163211061_163211535_163211669_163211806_163212014_163214625
ENSMUST00000155852.7	chr1	-	2861	8	FSM	ENSMUSG00000060771.16	ENSMUST00000155852.7	2861	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	6.49960752347276	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAACCACAAAGC	NA	False	NA	NA	False	AATACA	-15	NA	37904154	37872515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325_37894455_37904103
ENSMUST00000155856.2	chr6	-	1077	3	FSM	ENSMUSG00000052419.8	ENSMUST00000155856.2	1077	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	53.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATTGTTTTGGTCTGCT	0	True	NA	NA	False	AATACA	-22	NA	13871465	13869798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_13870740_13871054_13871163_13871437
ENSMUST00000155869.8	chr8	-	2728	15	FSM	ENSMUSG00000001062.19	ENSMUST00000155869.8	2728	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.75682714432511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCATGTGACTTGTTCG	2288	False	NA	NA	False	AATAAA	-16	NA	123980848	123969096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974811_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
ENSMUST00000155870.2	chr19	+	678	2	FSM	ENSMUSG00000024829.13	ENSMUST00000155870.2	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1903	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGCTCACCACCCTG	7371	False	NA	NA	False	NA	NA	NA	3333059	3335325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3333172_3334759
ENSMUST00000155873.3	chr4	-	622	5	FSM	ENSMUSG00000059291.16	ENSMUST00000155873.3	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	4504.49472749164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCCGATTGTCCCACG	NA	False	NA	NA	False	NA	NA	NA	135780401	135777590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780280
ENSMUST00000155874.2	chr11	-	621	2	FSM	ENSMUSG00000004393.11	ENSMUST00000155874.2	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGCAGTACATGGTTCT	4515	False	NA	NA	False	NA	NA	NA	6217746	6217045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6217580_6217659
ENSMUST00000155894.2	chr11	-	985	7	FSM	ENSMUSG00000041346.12	ENSMUST00000155894.2	985	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	61.2880267443995	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTCATTGTGTCTGTTC	NA	False	NA	-3	True	TATAAA	-16	NA	69454748	69452583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454145_69454263_69454372_69454464_69454684
ENSMUST00000155901.8	chr5	-	6206	12	FSM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	-603	2961	-603	2282	multi-exon	TRUE	canonical	3	19	junction_9	8.72253659368072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGCTGTTTAAAAATTCT	NA	False	NA	-13	True	ATTAAA	-19	NA	96310452	96221152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
ENSMUST00000155953.8	chr2	-	1590	7	FSM	ENSMUSG00000026972.16	ENSMUST00000155953.8	1590	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.4940795711051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	9424	False	NA	-34	True	AATAAA	-14	NA	24825157	24815366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_24815689_24815767_24816461_24816599_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ENSMUST00000155965.2	chr11	+	473	4	FSM	ENSMUSG00000086003.8	ENSMUST00000155965.2	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	38.4967531098403	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTTTACCTGCTTGTA	NA	False	NA	15	True	AATAAA	-22	NA	94024327	94046602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_94024382_94029312_94029490_94046281_94046324_94046402
ENSMUST00000155966.8	chr16	-	963	6	FSM	ENSMUSG00000023791.19	ENSMUST00000155966.8	963	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	129.408500493592	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTCTTTTCAGAACT	NA	False	NA	-22	True	AATAAA	-8	NA	31918546	31903255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
ENSMUST00000155990.8	chr4	-	3120	6	FSM	ENSMUSG00000028906.18	ENSMUST00000155990.8	3120	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	56.7746422269661	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	7617	False	NA	NA	False	AATAAA	-21	NA	131664522	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663164_131664325
ENSMUST00000155998.2	chr11	+	8030	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.0138659320415	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACTTGGACTAATGTG	NA	False	NA	NA	False	AATAAA	-25	NA	72580831	72662972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUST00000156015.2	chr3	+	1538	4	FSM	ENSMUSG00000028102.16	ENSMUST00000156015.2	1017	4	172	-693	0	0	multi-exon	FALSE	canonical	3	31	junction_1	117.382565428886	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542987	96552042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96543056_96543989_96544106_96544446_96544649_96550890
ENSMUST00000156038.2	chr3	-	7031	4	FSM	ENSMUSG00000044864.17	ENSMUST00000156038.2	7031	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	1.63299316185545	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGTTTAATTTCGT	NA	False	NA	NA	False	AATAAA	-20	NA	38537240	38503799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839
ENSMUST00000156108.8	chr3	-	2108	5	FSM	ENSMUSG00000028064.18	ENSMUST00000156108.8	2108	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	4.71036092035419	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTTATGGCGTGCTGTG	NA	False	NA	NA	False	ATTAAA	-20	NA	88348446	88343268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88344560_88345109_88345208_88345489_88345648_88345749_88345869_88348004
ENSMUST00000156110.8	chr5	-	2269	11	FSM	ENSMUSG00000062234.15	ENSMUST00000156110.8	2269	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	110.523707863969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTGTAAAGCACTTC	NA	False	NA	-25	True	ATTAAA	-26	NA	108739537	108717276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108739010_108739091_108739515
ENSMUST00000156123.2	chr10	+	2806	5	FSM	ENSMUSG00000020042.16	ENSMUST00000156123.2	2806	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3.96074487943871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCATCCTCTTTATGGT	NA	False	NA	13	True	ATTAAA	-18	NA	85481066	85496156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUST00000156145.7	chr4	+	553	2	FSM	ENSMUSG00000028691.13	ENSMUST00000156145.7	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	23986	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTAAAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	116542795	116545094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_116542858_116544603
ENSMUST00000156161.8	chr3	-	1991	9	FSM	ENSMUSG00000033439.13	ENSMUST00000156161.8	1991	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	12.4993749843742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGACAGAGACAC	NA	False	NA	NA	False	NA	NA	NA	116388536	116377772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUST00000156164.2	chr17	+	534	3	FSM	ENSMUSG00000058392.14	ENSMUST00000156164.2	534	3	0	0	0	0	multi-exon	TRUE	canonical	3	669	junction_2	33	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACTCTCACACTGAGGAG	NA	False	NA	NA	False	NA	NA	NA	32255376	32266896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_32255579_32264902_32264986_32266647
ENSMUST00000156173.8	chr11	-	3751	17	FSM	ENSMUSG00000020740.14	ENSMUST00000156173.8	3751	17	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	101.135564188618	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3381	False	NA	-2	True	AATAAA	-15	NA	115494877	115475080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115476667_115476911_115477023_115477141_115477247_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ENSMUST00000156196.2	chr11	-	2730	5	FSM	ENSMUSG00000034201.14	ENSMUST00000156196.2	2730	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	64.4801325991192	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGATTCTAGAGTTAA	NA	False	NA	17	True	NA	NA	NA	5014851	5010469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836
ENSMUST00000156203.8	chr14	-	5302	39	FSM	ENSMUSG00000042104.19	ENSMUST00000156203.8	6456	39	0	1154	0	0	multi-exon	TRUE	canonical	0	0	junction_5	1.51355829942615	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATACTCTATATTTAT	NA	False	NA	NA	False	AATAAA	-27	NA	119336842	119223604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_119224326_119232357_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUST00000156218.2	chr10	-	2124	4	FSM	ENSMUSG00000062931.16	ENSMUST00000156218.2	2124	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	59.275252471462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTATTTATGTTGTC	NA	False	NA	NA	False	NA	NA	NA	82077114	82060687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82062428_82063278_82063426_82063632_82063760_82077004
ENSMUST00000156246.2	chr4	-	2478	5	FSM	ENSMUSG00000043085.15	ENSMUST00000156246.2	2478	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	19.536824204563	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCTGCGTTGAGGATCA	NA	False	NA	-8	True	AATAAA	-12	NA	141345292	141341547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141342018_141342255_141343933_141344605_141344781_141344950_141345024_141345209
ENSMUST00000156249.2	chr5	-	2581	2	FSM	ENSMUSG00000008348.10	ENSMUST00000156249.2	2581	2	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_1	0	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTCATTTGTGTT	NA	False	NA	-12	True	AATAAA	-14	NA	125467266	125463040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125465329_125466973
ENSMUST00000156261.2	chr7	+	2827	7	FSM	ENSMUSG00000030861.16	ENSMUST00000156261.2	2827	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	9.3704618645804	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATTCTCCCTTTTTATG	NA	False	NA	21	True	AATAAA	-25	NA	131031539	131047938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUST00000156290.9	chr5	+	8067	23	FSM	ENSMUSG00000033209.18	ENSMUST00000156290.9	10688	23	0	2621	0	-2620	multi-exon	TRUE	canonical	1	3	junction_2	5.32128891364483	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCATTTTAGAACTATG	NA	False	NA	NA	False	NA	NA	NA	111027668	111435025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_111027855_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111429745_111429770_111430636_111430767_111431810_111431919_111432857
ENSMUST00000156294.8	chr11	-	2158	4	FSM	ENSMUSG00000057778.15	ENSMUST00000156294.8	2158	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACTGTAACTCCCACAT	NA	False	NA	-17	True	AATAAA	-19	NA	72686968	72668074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686842
ENSMUST00000156299.8	chrX	-	2080	10	FSM	ENSMUSG00000002010.18	ENSMUST00000156299.8	2080	10	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_7	119.009596044257	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
ENSMUST00000156326.2	chr11	+	2249	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	18.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	16	True	AATAAA	-18	NA	102176021	102180063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102176545_102178133_102178698_102178901
ENSMUST00000156333.9	chr8	-	8219	51	FSM	ENSMUSG00000014444.18	ENSMUST00000156333.9	8219	51	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_46	25.1307699842245	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTCCTCGCCTTCC	6111	False	NA	2	True	AGTAAA	-38	NA	123278068	123208436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ENSMUST00000156374.9	chr4	-	1909	9	FSM	ENSMUSG00000029022.19	ENSMUST00000156374.9	1909	9	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_8	23.8995292840675	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952956	147945247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUST00000156380.4	chr8	+	1193	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_1	68.3715340376876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTACTCTTCATTGATTT	5587	False	NA	NA	False	AAAACA	-14	NA	3671550	3674235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
ENSMUST00000156382.8	chr2	+	747	6	FSM	ENSMUSG00000074797.12	ENSMUST00000156382.8	747	6	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_5	71.8888030224457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACCACCTTGTTCCT	5430	False	NA	NA	False	NA	NA	NA	130509724	130517935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548
ENSMUST00000156390.8	chrX	-	3574	20	FSM	ENSMUSG00000025059.17	ENSMUST00000156390.8	4245	20	13	658	0	-658	multi-exon	FALSE	canonical	3	125	junction_19	13.2977827073068	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820230	84746200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUST00000156392.8	chr1	-	1122	6	FSM	ENSMUSG00000026049.12	ENSMUST00000156392.8	1122	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	166.814148081031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTGCCTTTGTTTTAC	NA	False	NA	-3	True	ATTAAA	-17	NA	44141598	44125775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139082_44141487
ENSMUST00000156440.8	chr9	+	2984	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGGTACAGCGTCCATT	NA	False	NA	NA	False	AATAAA	-18	NA	46184361	46193941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUST00000156440.8-0	chr9	+	1813	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	129	1042	0	117	multi-exon	FALSE	canonical	3	619	junction_8	51.2505159448701	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184490	46192899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUST00000156442.8	chr2	-	4176	23	FSM	ENSMUSG00000026924.18	ENSMUST00000156442.8	4176	23	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	23.115412911077	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGGCTTCCTTTGTGTT	NA	False	NA	0	True	AATAAA	-27	NA	26319524	26299442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385
ENSMUST00000156473.8	chrX	-	1114	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	126.702170462861	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTCAGCTAGTTTCT	NA	False	NA	-11	True	NA	NA	NA	100266159	100141391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUST00000156481.8	chr5	+	808	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	74	3678	0	0	multi-exon	FALSE	canonical	3	1736	junction_3	82.366390124991	531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTTGTTGTTTGTA	7406	False	NA	22	True	AGTAAA	-11	NA	45677644	45682940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
ENSMUST00000156486.2-1	chr6	-	4499	4	FSM	ENSMUSG00000030265.15	ENSMUST00000156486.2	832	4	-69	-3598	0	0	multi-exon	FALSE	canonical	3	11	junction_2	433.641172706959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAATTATGTAGTTTT	NA	False	NA	-8	True	AATAAA	-22	NA	145195965	145162424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_145166451_145177820_145177981_145192420_145192543_145195774
ENSMUST00000156503.2	chr11	-	375	2	FSM	ENSMUSG00000044894.15	ENSMUST00000156503.2	375	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGACTTTGTGTGCTT	2943	False	NA	-8	True	AATAAA	-17	NA	53321658	53319779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_53319978_53321481
ENSMUST00000156506.8	chr2	-	1385	6	FSM	ENSMUSG00000034032.16	ENSMUST00000156506.8	1385	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	119.666870937616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAAAATCCTCAAA	487	False	NA	NA	False	NA	NA	NA	119617995	119608131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ENSMUST00000156513.3	chr15	-	1180	3	FSM	ENSMUSG00000022433.22	ENSMUST00000156513.3	1180	3	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	59	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCCACTTACTGGTAAGG	NA	False	NA	NA	False	NA	NA	NA	79310644	79308365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79309189_79309699_79309871_79310458
ENSMUST00000156520.8	chr9	+	3157	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	12.9925192151313	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180672	122210589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ENSMUST00000156524.2	chr11	+	665	5	FSM	ENSMUSG00000006058.11	ENSMUST00000156524.2	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_3	18.8994047525312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAACCAAACCAAACAA	3268	False	NA	NA	False	NA	NA	NA	95925781	95934487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229
ENSMUST00000156529.8	chr7	+	2034	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	43.1689188601655	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	594	False	NA	16	True	AATAAA	-23	NA	101872234	101887774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUST00000156561.8	chr8	+	2937	14	FSM	ENSMUSG00000031889.10	ENSMUST00000156561.8	2937	14	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_8	14.5728124912566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAATAGG	NA	False	NA	NA	False	NA	NA	NA	105951837	105977757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350
ENSMUST00000156568.8	chr16	-	3856	9	FSM	ENSMUSG00000022704.17	ENSMUST00000156568.8	3856	9	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_3	36.5299534628776	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710011	43681769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_43683665_43687772_43687891_43689308_43689461_43691141_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ENSMUST00000156585.9	chr19	-	3133	11	FSM	ENSMUSG00000025223.16	ENSMUST00000156585.9	3133	11	0	0	0	0	multi-exon	TRUE	canonical	3	350	junction_1	132.738992010637	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGTCATGTATGGTAC	6722	False	NA	NA	False	NA	NA	NA	46033649	46020008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ENSMUST00000156587.2	chr2	+	2386	2	FSM	ENSMUSG00000036617.18	ENSMUST00000156587.2	2386	2	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTGGACTTCCTTT	NA	False	NA	22	True	AATAAA	-14	NA	20812264	20815335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_20812836_20813520
ENSMUST00000156597.8	chr3	+	2450	13	FSM	ENSMUSG00000063052.10	ENSMUST00000156597.8	2450	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	215.046296694973	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742336	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_157742514_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUST00000156617.8	chr2	+	1408	5	FSM	ENSMUSG00000009563.17	ENSMUST00000156617.8	915	5	21	-514	0	0	multi-exon	FALSE	canonical	3	24	junction_1	95.4214336509361	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGACCAAAGTTTCTTAC	631	False	NA	9	True	AATAAA	-20	NA	32647287	32652256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32647463_32648768_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUST00000156635.2	chr4	-	724	4	FSM	ENSMUSG00000059713.13	ENSMUST00000156635.2	724	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	5.43650214343336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGATGCGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	135161134	135145753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_135145863_135147556_135147731_135152524_135152754_135160922
ENSMUST00000156641.8	chr2	-	1292	9	FSM	ENSMUSG00000032046.16	ENSMUST00000156641.8	1292	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	95.3060038769856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGAATCAGAGTTTCTTC	4527	False	NA	-5	True	AATAAA	-38	NA	150684490	150674412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150684430
ENSMUST00000156653.8	chr3	+	2825	18	FSM	ENSMUSG00000015522.19	ENSMUST00000156653.8	2825	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	90.8133947408633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTTAGGATCCTCTGA	NA	False	NA	-2	True	ATTAAA	-11	NA	95373598	95402878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
ENSMUST00000156657.8	chr2	-	1436	3	FSM	ENSMUSG00000013523.14	ENSMUST00000156657.8	594	3	-55	-787	0	0	multi-exon	FALSE	canonical	3	10	junction_2	33.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGGTGGTTTTTTTTTT	4146	False	NA	1	True	AATAAA	-22	NA	170191715	170189063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_170190069_170191101_170191384_170191566
ENSMUST00000156661.9	chr5	-	5056	22	FSM	ENSMUSG00000070733.14	ENSMUST00000156661.9	5056	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	6.09039986548847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAATATATCTGTTAAC	NA	False	NA	NA	False	AAGAAA	-8	NA	73228920	73178540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447
ENSMUST00000156680.2	chr9	+	3760	11	FSM	ENSMUSG00000037808.14	ENSMUST00000156680.2	3760	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	54.6652540467892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACTGTGATTTGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	13739011	13757837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748132_13748269_13750935_13751038_13755324
ENSMUST00000156685.2	chr11	-	711	3	FSM	ENSMUSG00000025134.3	ENSMUST00000156685.2	711	3	0	0	0	0	multi-exon	FALSE	canonical	3	3672	junction_2	102.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGGTACCTGTTCTT	4440	False	NA	NA	False	GGGGCT	-11	NA	120489057	120486441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120486894_120488460_120488593_120488930
ENSMUST00000156686.2	chr4	-	2570	3	FSM	ENSMUSG00000047719.3	ENSMUST00000156686.2	576	3	0	-1994	0	0	multi-exon	FALSE	canonical	2	6	junction_2	43.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529218	148518951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148521100_148528384_148528587_148528998
ENSMUST00000156700.2	chr14	+	3098	12	FSM	ENSMUSG00000034327.18	ENSMUST00000156700.2	3098	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	31.9689932422906	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTTCTGCTCTTGCT	NA	False	NA	10	True	AATAAA	-22	NA	67953733	67979610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966672_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
ENSMUST00000156710.2	chr4	-	563	2	FSM	ENSMUSG00000028896.14	ENSMUST00000156710.2	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCACAGGCAGGTCACT	5494	False	NA	NA	False	NA	NA	NA	132073003	132066801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132067318_132072956
ENSMUST00000156711.8	chr2	+	2809	5	FSM	ENSMUSG00000026848.15	ENSMUST00000156711.8	2809	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.5918570377542	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTTCCTGAGCTTTTCC	NA	False	NA	10	True	AATAAA	-15	NA	30843198	30849024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30843236_30843763_30844021_30845779_30845966_30846459_30846588_30846823
ENSMUST00000156713.8	chr16	-	3246	21	FSM	ENSMUSG00000022962.16	ENSMUST00000156713.8	3246	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	429.171000301745	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAGCATTTATTTAAGA	1507	False	NA	NA	False	AATAAA	-23	NA	91440034	91418280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433390_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844
ENSMUST00000156722.2	chr5	+	3251	21	FSM	ENSMUSG00000029602.12	ENSMUST00000156722.2	3251	21	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_7	7.30479294709987	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	NA	False	NA	11	True	TATAAA	-21	NA	120787252	120817662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_120787600_120790878_120790936_120792870_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
ENSMUST00000156729.2	chr5	+	1558	6	FSM	ENSMUSG00000025532.14	ENSMUST00000156729.2	669	6	-32	-857	0	0	multi-exon	FALSE	canonical	3	25	junction_1	131.765549367048	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCCACCATACCTGG	NA	False	NA	5	True	AAAACA	-1	NA	130058151	130089630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130058336_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ENSMUST00000156741.8	chrX	-	1038	7	FSM	ENSMUSG00000031157.11	ENSMUST00000156741.8	763	7	0	-275	0	0	multi-exon	FALSE	canonical	3	64	junction_6	182.287014226345	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGGCTTGAGTGCTTC	565	False	NA	-1	True	AATAAA	-22	NA	7765239	7760757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765204
ENSMUST00000156763.8	chr2	-	965	4	FSM	ENSMUSG00000040174.15	ENSMUST00000156763.8	965	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.239566933689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTAGATTGGCTTGTA	8853	False	NA	NA	False	NA	NA	NA	93841097	93836588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_93837227_93838383_93838472_93838768_93838938_93841027
ENSMUST00000156784.2	chr11	+	684	5	FSM	ENSMUSG00000000581.9	ENSMUST00000156784.2	684	5	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	280.161895160637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGCACTCTGGGAACCC	7425	False	NA	NA	False	NA	NA	NA	17207687	17216624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_17208008_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUST00000156795.2	chrX	-	1025	6	FSM	ENSMUSG00000036932.15	ENSMUST00000156795.2	1025	6	0	0	0	0	multi-exon	FALSE	canonical	3	1158	junction_4	71.0903650293062	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	False	NA	-2	True	ATTAAA	-15	NA	47571773	47563821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598
ENSMUST00000156806.8	chr5	+	714	5	FSM	ENSMUSG00000051674.16	ENSMUST00000156806.8	714	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	58.8833592791716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGGTTTTATGAATA	NA	False	NA	NA	False	AATAAA	-35	NA	73649998	73680062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_73650420_73668228_73668300_73668469_73668510_73677458_73677574_73679995
ENSMUST00000156816.7	chr1	-	1008	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	29	3166	0	0	multi-exon	FALSE	canonical	3	2059	junction_1	113.670576667843	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGCTCAGGTCTTTTG	1649	False	NA	-10	True	ATTAAA	-22	NA	4855933	4846599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUST00000156829.8	chr6	+	3519	12	FSM	ENSMUSG00000029863.14	ENSMUST00000156829.8	1439	12	-64	-2016	0	0	multi-exon	FALSE	canonical	3	27	junction_8	34.7888554397801	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241989	42259442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42253803_42253865_42256710_42256861_42257017_42257128_42257279
ENSMUST00000156838.8	chr1	+	2968	12	FSM	ENSMUSG00000026213.16	ENSMUST00000156838.8	2968	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	11.0378761880989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGACTCTGGAAGTCAC	9851	False	NA	18	True	AATAAA	-17	NA	75505283	75513579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ENSMUST00000156847.9	chr3	-	915	6	FSM	ENSMUSG00000064068.16	ENSMUST00000156847.9	915	6	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_3	35.3870032639103	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACTTTTTCCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	89121169	89117051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ENSMUST00000156851.2	chr5	-	555	2	FSM	ENSMUSG00000049606.17	ENSMUST00000156851.2	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCCTGTTGTGTGCACAA	NA	False	NA	NA	False	GATAAA	-45	NA	106843878	106843225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_106843566_106843663
ENSMUST00000156859.3	chr5	-	2723	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	172	1122	0	0	multi-exon	FALSE	canonical	3	340	junction_11	40.0253382350609	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGGCCTGTTTTCTTCT	NA	False	NA	-3	True	AATAAA	-23	NA	30359988	30324423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ENSMUST00000156862.3	chr17	-	2585	13	FSM	ENSMUSG00000002249.22	ENSMUST00000156862.3	2585	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	2.49861072509416	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCCATATGCAA	NA	False	NA	NA	False	ATTAAA	-19	NA	28569791	28550687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28554458_28554471_28555484_28555548_28559127_28559193_28560322_28560575_28569582
ENSMUST00000156876.8	chr1	-	4932	7	FSM	ENSMUSG00000041439.16	ENSMUST00000156876.8	4932	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	2.05480466765633	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTCTCTTGAGATCCTT	NA	False	NA	1	True	NA	NA	NA	52766621	52695444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52697705_52699965_52700247_52701548_52701648_52702443_52702606_52715636_52715735_52747322_52748915_52766181
ENSMUST00000156898.5	chr6	+	1396	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	78	796	0	0	multi-exon	FALSE	canonical	3	688	junction_1	248.294985853521	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGTGCTCTGTGTGGG	NA	False	NA	38	True	ATTAAA	-30	NA	113355153	113366613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUST00000156899.2	chr9	-	1274	3	FSM	ENSMUSG00000032366.16	ENSMUST00000156899.2	1274	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	301.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAACAAATCGCACGC	NA	False	NA	NA	False	NA	NA	NA	66940107	66937201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66938381_66938733_66938797_66940075
ENSMUST00000156910.2	chr4	+	3621	2	FSM	ENSMUSG00000028572.14	ENSMUST00000156910.2	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTCTGCTTCTGATTC	NA	False	NA	10	True	AATAAA	-37	NA	95909477	95913628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_95909874_95910403
ENSMUST00000156918.8	chr9	-	3485	16	FSM	ENSMUSG00000048537.17	ENSMUST00000156918.8	3485	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	12.2945335639688	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44624562	44597604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44624469
ENSMUST00000156931.8	chr1	-	3054	11	FSM	ENSMUSG00000026034.18	ENSMUST00000156931.8	4865	11	0	1811	0	0	multi-exon	FALSE	canonical	3	126	junction_10	34.9097407609968	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTCTATAGCTTGGTG	NA	False	NA	-12	True	AATAAA	-20	NA	58463225	58451158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58460468_58460932_58461094_58463078
ENSMUST00000156940.8	chr10	-	1772	3	FSM	ENSMUSG00000019763.12	ENSMUST00000156940.8	1772	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	8	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACTGAGTTCAAGTCC	5706	False	NA	NA	False	NA	NA	NA	4382344	4376093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_4377692_4379076_4379172_4382265
ENSMUST00000156963.8	chr5	-	1208	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGTCAGGGTTGACTG	NA	False	NA	32	True	NA	NA	NA	137016875	137011017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
ENSMUST00000156963.8-0	chr5	-	936	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	242	30	-236	0	multi-exon	FALSE	canonical	0	0	junction_4	134.024251536802	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGCTCATTCTGGG	NA	False	NA	2	True	AATAAA	-18	NA	137016633	137011047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
ENSMUST00000156966.2	chr11	-	522	3	FSM	ENSMUSG00000042709.16	ENSMUST00000156966.2	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_2	53.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGCTCCCCAAGCCTTC	NA	False	NA	NA	False	NA	NA	NA	60307862	60300040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60300232_60300411_60300457_60307576
ENSMUST00000156969.8	chr11	-	2324	13	FSM	ENSMUSG00000000384.16	ENSMUST00000156969.8	2324	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	134.990406037697	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGCCACTGGCTTTTCT	NA	False	NA	-5	True	AATAAA	-19	NA	6576043	6565597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUST00000156970.8	chr8	+	1708	13	FSM	ENSMUSG00000003808.19	ENSMUST00000156970.8	1708	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	180.621996322584	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTGTCATTCATTTC	NA	False	NA	37	True	AATAAA	-37	NA	85583648	85595885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUST00000157045.8	chr3	+	840	4	FSM	ENSMUSG00000027937.16	ENSMUST00000157045.8	840	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	162.68852312181	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGAAGGCGTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	90138940	90142726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90139348_90139501_90139819_90141229_90141310_90142690
ENSMUST00000157047.2	chr9	+	656	2	FSM	ENSMUSG00000004100.13	ENSMUST00000157047.2	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGAGAAGGGTAGATATG	NA	False	NA	NA	False	NA	NA	NA	20799562	20800978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20799874_20800633
ENSMUST00000157063.2	chr10	+	722	8	FSM	ENSMUSG00000020153.15	ENSMUST00000157063.2	722	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	732.821330230511	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTCTGTGTGGACT	9725	False	NA	25	True	AATAAA	-16	NA	80085318	80092628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80085326_80088230_80088268_80088912_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUST00000157067.9	chr4	-	2637	20	FSM	ENSMUSG00000003644.18	ENSMUST00000157067.9	2637	20	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_6	77.3310686776375	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTTTTTACAAGATCC	2274	False	NA	NA	False	NA	NA	NA	133599624	133575135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197
ENSMUST00000157074.6	chr5	+	4194	5	FSM	ENSMUSG00000029179.15	ENSMUST00000157074.6	4194	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	7.15454401062709	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	TTTAAA	-5	NA	52940427	52957510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923
ENSMUST00000157077.2	chr7	+	804	3	FSM	ENSMUSG00000030983.5	ENSMUST00000157077.2	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	1578	junction_1	6.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATAAAAGCAAGGAAGGG	1322	False	NA	NA	False	NA	NA	NA	133311076	133317175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_133311258_133315916_133315992_133316627
ENSMUST00000157627.3	chr8	-	104	1	FSM	ENSMUSG00000088252.3	ENSMUST00000157627.3	104	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTAGGAGGATCCTCC	NA	False	NA	-12	True	NA	NA	NA	31639995	31639891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_31639900_31640000
ENSMUST00000157629.3	chr9	+	135	1	FSM	ENSMUSG00000088254.3	ENSMUST00000157629.3	135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTTTAAAAACTTTTTAA	NA	False	NA	26	True	NA	NA	NA	64203212	64203347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64203200_64203300
ENSMUST00000158218.4	chr10	-	115	1	FSM	ENSMUSG00000088843.4	ENSMUST00000158218.4	115	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATGGAGGAGATAAAGGT	NA	False	NA	NA	False	NA	NA	NA	88000935	88000820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88000800_88000900
ENSMUST00000158333.3	chr4	-	131	1	FSM	ENSMUSG00000088958.3	ENSMUST00000158333.3	131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATTCAGATCCATGAAG	NA	False	NA	NA	False	NA	NA	NA	86504820	86504689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_86504700_86504800
ENSMUST00000158630.3	chr17	-	128	1	FSM	ENSMUSG00000089255.3	ENSMUST00000158630.3	128	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCGACTCTGCTGCCCC	4463	False	NA	NA	False	NA	NA	NA	24938777	24938649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24938600_24938800
ENSMUST00000158640.2	chr4	-	77	1	FSM	ENSMUSG00000089265.2	ENSMUST00000158640.2	77	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCATTAATTGTGTCCAT	8746	False	NA	NA	False	NA	NA	NA	41203133	41203056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_41203100_41203100
ENSMUST00000159008.2	chr19	-	610	3	FSM	ENSMUSG00000079478.10	ENSMUST00000159008.2	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTGTAAATCAGTGGGGC	NA	False	NA	NA	False	NA	NA	NA	5781727	5780919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5781354_5781471_5781624_5781703
ENSMUST00000159018.8	chr5	+	741	6	FSM	ENSMUSG00000038722.18	ENSMUST00000159018.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	311.754133894003	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	False	NA	16	True	AATAAA	-17	NA	145077217	145084884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145077253_145078114_145078171_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUST00000159027.8	chr14	-	3165	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	0	666	0	0	multi-exon	FALSE	canonical	3	82	junction_1	50.211858850582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	NA	False	NA	-1	True	AATAAA	-25	NA	20596641	20550097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ENSMUST00000159036.8	chr16	+	2288	17	FSM	ENSMUSG00000038084.17	ENSMUST00000159036.8	2288	17	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	64.3648960517299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGGAAGAACTAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	29398195	29433442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943
ENSMUST00000159042.2	chr10	-	890	2	FSM	ENSMUSG00000020079.16	ENSMUST00000159042.2	890	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGACCCCGACTCCGAT	NA	False	NA	-87	True	NA	NA	NA	62266747	62265221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62265614_62266249
ENSMUST00000159050.8-1	chr9	+	5140	20	FSM	ENSMUSG00000032280.17	ENSMUST00000159050.8	2304	20	-1055	-1781	0	0	multi-exon	FALSE	canonical	3	64	junction_12	47.5364854771947	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTGTTTTAATTGCCT	NA	False	NA	46	True	AAAAAG	-11	NA	61279664	61325779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUST00000159059.2	chr1	+	1024	4	FSM	ENSMUSG00000037509.22	ENSMUST00000159059.2	1024	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	6.64997911442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTACTGAAGCAAGTCGAG	NA	False	NA	NA	False	NA	NA	NA	34840802	34845779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395
ENSMUST00000159073.8	chr14	-	766	5	FSM	ENSMUSG00000043004.14	ENSMUST00000159073.8	960	5	378	-184	0	184	multi-exon	FALSE	canonical	1	3	junction_4	48.2312139594267	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGCTGACATTCTGGT	NA	False	NA	-22	True	AATAAA	-26	NA	20027317	19925538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025_20027066_20027213
ENSMUST00000159081.8	chr11	-	755	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	130	3623	0	0	multi-exon	FALSE	canonical	3	2089	junction_1	53.5	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGGTAAAAAAGAGAAACC	NA	False	NA	-31	True	AATATA	-10	NA	22932252	22849758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_22850058_22906410_22906693_22932078
ENSMUST00000159086.10	chr17	-	10851	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTTTGGTGCTGTCAT	NA	False	NA	-5	True	NA	NA	NA	33007261	32984469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
ENSMUST00000159091.9	chr3	-	3197	7	FSM	ENSMUSG00000004896.17	ENSMUST00000159091.9	3197	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	23.5849528301415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACCTCTGAGTTCC	9460	False	NA	-2	True	NA	NA	NA	87837434	87829907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ENSMUST00000159091.9-0	chr3	-	2157	7	FSM	ENSMUSG00000004896.17	ENSMUST00000159091.9	3197	7	-17	1057	0	0	multi-exon	FALSE	canonical	3	63	junction_5	23.5849528301415	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9443	False	NA	-22	True	TATAAA	-27	NA	87837451	87830964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ENSMUST00000159099.8	chr9	-	1201	6	FSM	ENSMUSG00000001366.15	ENSMUST00000159099.8	1201	6	0	0	0	0	multi-exon	FALSE	non_canonical	2	34	junction_4	15.3961034031342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTCATATTGATTT	NA	False	NA	NA	False	AATAAA	-15	NA	78015886	78002794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ENSMUST00000159102.2	chr5	-	584	2	FSM	ENSMUSG00000059866.14	ENSMUST00000159102.2	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGAAGAGCTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	34671004	34660629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_34661172_34670962
ENSMUST00000159109.2	chr9	-	7777	10	FSM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.80058475033046	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGGGCTGCTGGTTA	NA	False	NA	0	True	AATAAA	-24	NA	65734846	65599672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
ENSMUST00000159110.8	chr10	-	6433	27	FSM	ENSMUSG00000019979.13	ENSMUST00000159110.8	6433	27	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_15	13.5705476423617	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTTCGGGATCCTTT	NA	False	NA	NA	False	AATAAA	-25	NA	90918524	90825172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90859581_90859711_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748_90915951_90918044
ENSMUST00000159117.2	chr1	-	2640	2	FSM	ENSMUSG00000039630.11	ENSMUST00000159117.2	2640	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGCTTCTCTTGTTTT	NA	False	NA	-1	True	ATTAAA	-22	NA	178151736	178148672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_178150761_178151184
ENSMUST00000159121.2	chr15	-	769	4	FSM	ENSMUSG00000022234.16	ENSMUST00000159121.2	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	5907	junction_1	275.901351130355	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATCATTTTGGGGAAG	NA	False	NA	NA	False	NA	NA	NA	31601886	31595586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_31595990_31597556_31597722_31598145_31598207_31601746
ENSMUST00000159124.8	chr6	-	2600	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_14	59.8544152123146	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	29216363	29200435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
ENSMUST00000159136.8	chr9	-	3789	35	FSM	ENSMUSG00000041528.16	ENSMUST00000159136.8	3789	35	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_34	19.1404389025979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGGTGATGTGTAAAC	NA	False	NA	NA	False	AATGAA	-35	NA	107956927	107933097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956888
ENSMUST00000159166.8	chr1	-	2977	13	FSM	ENSMUSG00000026024.15	ENSMUST00000159166.8	2977	13	0	0	0	0	multi-exon	FALSE	canonical	2	94	junction_2	9.94847838728226	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGGGCCCCATTAAGC	NA	False	NA	NA	False	NA	NA	NA	59276390	59230767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ENSMUST00000159168.3	chr6	+	1975	3	FSM	ENSMUSG00000089862.9	ENSMUST00000159168.3	1975	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTTCATTGCATTAGTA	NA	False	NA	NA	False	AATAAA	-29	NA	8270465	8428767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_8270582_8373905_8373968_8426970
ENSMUST00000159188.2	chr3	-	747	5	FSM	ENSMUSG00000036834.17	ENSMUST00000159188.2	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.9180788932265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCTGATGGCTGGCAT	NA	False	NA	NA	False	NA	NA	NA	63806863	63688797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_63688977_63691411_63691559_63778076_63778196_63793348_63793435_63806647
ENSMUST00000159200.2	chr6	-	3411	5	FSM	ENSMUSG00000079654.4	ENSMUST00000159200.2	3411	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.4790199457749	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATGTTCTGACCTTCTT	70	False	NA	NA	False	AATAAA	-14	NA	29179583	29169230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179455
ENSMUST00000159209.8	chr15	+	944	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCACCCCCCCACCCCTG	NA	False	NA	-68	True	NA	NA	NA	99291099	99306416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000159209.8-0	chr15	+	2458	10	FSM	ENSMUSG00000023010.16	ENSMUST00000159209.8	944	10	0	-1514	0	0	multi-exon	FALSE	canonical	3	114	junction_1	555.512064964378	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99291099	99307930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99291265_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000159216.10	chr15	+	2085	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.78535710713571	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTCTTTATTGT	9277	False	NA	14	True	AATAAA	-19	NA	3300402	3309989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
ENSMUST00000159230.8	chr1	+	3432	6	FSM	ENSMUSG00000040918.13	ENSMUST00000159230.8	3432	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	97.8296478578963	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076623	164092938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUST00000159252.8	chr6	-	3744	14	FSM	ENSMUSG00000040669.15	ENSMUST00000159252.8	3744	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	370.911239960444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9078	False	NA	-31	True	ATTAAA	-22	NA	122316615	122294708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309613_122310249_122310400_122311028_122311110_122313816_122313975_122316556
ENSMUST00000159283.8	chr9	-	847	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	62	1338	0	0	multi-exon	FALSE	canonical	3	771	junction_3	24.1660919471891	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCACAGTATTCTGTCC	NA	False	NA	-11	True	ATTAAA	-24	NA	106769116	106765951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
ENSMUST00000159292.8	chr14	-	1279	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	21	2088	0	0	multi-exon	TRUE	canonical	3	62	junction_9	170.895289578151	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTTGTGTTTTTCAGTT	NA	False	NA	-1	True	AATAAA	-24	NA	51162329	51153138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ENSMUST00000159313.2	chr19	+	2327	2	FSM	ENSMUSG00000090235.2	ENSMUST00000159313.2	2327	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTTTATTATTATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	42767470	42769893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42767783_42767878
ENSMUST00000159337.8	chr13	-	2273	6	FSM	ENSMUSG00000021614.17	ENSMUST00000159337.8	2273	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6.6932802122726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTGTTATTTATTAGT	2797	False	NA	NA	False	ATTAAA	-17	NA	89890437	89859344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ENSMUST00000159342.8	chr4	+	5456	42	FSM	ENSMUSG00000038368.17	ENSMUST00000159342.8	5456	42	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_33	32.2118766455104	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCAATGTGACTTTTATT	NA	False	NA	8	True	AGTAAA	-17	NA	88039535	88329241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUST00000159345.8	chr5	-	1629	11	FSM	ENSMUSG00000029413.15	ENSMUST00000159345.8	1629	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	12.5892811550144	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAACTCTGACTTTTGAT	9203	False	NA	NA	False	AGTAAA	-14	NA	92426024	92406291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424937_92425770
ENSMUST00000159348.3	chr19	+	4989	5	FSM	ENSMUSG00000053080.11	ENSMUST00000159348.3	4989	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	19.3713706278105	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	7394989	7403269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7395283_7397431_7397927_7398619_7399010_7399278_7399828_7400007
ENSMUST00000159364.3	chr8	-	392	2	FSM	ENSMUSG00000089665.3	ENSMUST00000159364.3	392	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGATGTCTTTCTAT	NA	False	NA	-4	True	AATACA	-15	NA	3722362	3721187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_3721397_3722179
ENSMUST00000159376.2	chr9	+	711	3	FSM	ENSMUSG00000025785.6	ENSMUST00000159376.2	711	3	0	0	0	0	multi-exon	FALSE	canonical	3	1248	junction_2	85	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACAGGTGGCTCAGAAT	NA	False	NA	NA	False	NA	NA	NA	122942322	122948849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122942388_122947955_122948058_122948305
ENSMUST00000159424.8	chr8	+	726	5	FSM	ENSMUSG00000031782.16	ENSMUST00000159424.8	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	12.5797456254091	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCATAGTGCACTTGGCA	NA	False	NA	NA	False	NA	NA	NA	95565032	95577345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142
ENSMUST00000159433.8	chr6	+	2025	4	FSM	ENSMUSG00000089862.9	ENSMUST00000159433.8	2025	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	5.43650214343336	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAATGGCTTTCATTGC	10	True	NA	NA	False	AATAAA	-22	NA	8259429	8428760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970
ENSMUST00000159459.8	chr13	-	1950	7	FSM	ENSMUSG00000021638.13	ENSMUST00000159459.8	1950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	29.1032644217105	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTGCTCATTTGATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	100689131	100634274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100689071
ENSMUST00000159481.8	chr3	+	549	4	FSM	ENSMUSG00000004127.13	ENSMUST00000159481.8	549	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.2519602705479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGCCTGGTCATCGACT	NA	False	NA	NA	False	NA	NA	NA	137849621	137854225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137849757_137852047_137852155_137853135_137853332_137854114
ENSMUST00000159498.2	chr6	+	2166	9	FSM	ENSMUSG00000090256.2	ENSMUST00000159498.2	2166	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	20.2407386228863	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATAAGACTACTTTCTT	NA	False	NA	NA	False	NA	NA	NA	85698906	85733508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85698997_85703505_85704659_85725732_85725851_85726991_85727196_85727474_85727717_85728211_85728366_85729034_85729099_85732543_85732643_85733466
ENSMUST00000159500.2	chr12	-	2700	6	FSM	ENSMUSG00000066441.15	ENSMUST00000159500.2	815	6	-57	-1828	-57	0	multi-exon	FALSE	canonical	0	0	junction_5	48.318112545918	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTATGGGGATATTGGA	NA	False	NA	-18	True	AATAAA	-40	NA	79238624	79221110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79238499
ENSMUST00000159514.8	chr16	+	3756	6	FSM	ENSMUSG00000022698.18	ENSMUST00000159514.8	3756	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	773.749675282646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCTGTCTGTAACTGT	NA	False	NA	19	True	AATAAA	-19	NA	43960192	43982837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43960475_43965143_43965282_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUST00000159545.8	chr4	-	2754	23	FSM	ENSMUSG00000028559.18	ENSMUST00000159545.8	2754	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	125.503712368128	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	False	NA	-6	True	CATAAA	-20	NA	109059431	108918851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109029470_109029522_109059301
ENSMUST00000159551.8	chr17	-	2060	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_7	218.990354833733	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTTTTCCTTTTG	NA	False	NA	-2	True	AATAAA	-18	NA	13211384	13185682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ENSMUST00000159569.9	chr9	-	6589	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	171	4516	0	2065	multi-exon	FALSE	canonical	3	28	junction_9	14.1499901845274	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371285	20344260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ENSMUST00000159592.8	chr5	-	8436	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTATGCTATGCTTTG	NA	False	NA	-11	True	AATAAA	-19	NA	114131955	114075154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ENSMUST00000159592.8-0	chr5	-	5638	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	127	2671	0	0	multi-exon	FALSE	canonical	3	321	junction_13	43.65589003438	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114131828	114077825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ENSMUST00000159594.2	chr6	-	682	2	FSM	ENSMUSG00000012483.5	ENSMUST00000159594.2	682	2	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAAAACATCTTTGATA	-15	True	NA	NA	False	TTTAAA	-16	NA	8259140	8257220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_8257762_8258999
ENSMUST00000159615.2	chr5	+	1976	6	FSM	ENSMUSG00000029635.16	ENSMUST00000159615.2	1976	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	17.7831380807775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAACATTGTTAAAAACAA	160	False	NA	NA	False	AATAAA	-7	NA	146231719	146239629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ENSMUST00000159634.8	chr19	+	1684	12	FSM	ENSMUSG00000071657.13	ENSMUST00000159634.8	1684	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	50.3060057535483	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTGTGTGGACATCCG	NA	False	NA	14	True	AATAAA	-14	NA	8815092	8826031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8815229_8816939_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUST00000159649.8	chr5	-	2093	10	FSM	ENSMUSG00000036948.18	ENSMUST00000159649.8	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	5.95248677154617	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTCTGTGTGTT	9909	False	NA	-2	True	ATTAAA	-18	NA	138261602	138257919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138258657_138258775_138258970_138259096_138259252_138259814_138259979_138260063_138260147_138260431_138260580_138260675_138260797_138260919_138261007_138261108_138261239_138261328
ENSMUST00000159663.8	chr1	+	346	8	FSM	ENSMUSG00000053332.14	ENSMUST00000159663.8	346	8	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	1912.24889508	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865794_160865843_160866026
ENSMUST00000159680.9	chr3	+	7029	32	FSM	ENSMUSG00000027692.17	ENSMUST00000159680.9	4380	32	-287	-2362	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.51754367825169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTTTTATATTTTT	4117	False	NA	11	True	AATAAA	-21	NA	28317424	28724734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_28317849_28413139_28413206_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
ENSMUST00000159683.2	chr16	+	1528	5	FSM	ENSMUSG00000022792.17	ENSMUST00000159683.2	1528	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	137.095769446034	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTTTACACAAGAACAA	9522	False	NA	16	True	AATAAA	-21	NA	16120844	16127496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073_16125245_16127195
ENSMUST00000159690.8	chr13	+	4132	8	FSM	ENSMUSG00000074794.11	ENSMUST00000159690.8	4132	8	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_6	68.2094613103263	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAATTGTTTGGCAGTT	NA	False	NA	23	True	AATAAA	-23	NA	81031528	81044154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039568_81039762_81041488
ENSMUST00000159692.8	chr19	-	5070	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	0	1988	0	0	multi-exon	FALSE	canonical	3	290	junction_6	30.8387014999672	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTGGAAAAAATGGATC	NA	False	NA	-17	True	AATAAA	-13	NA	29625815	29587601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ENSMUST00000159693.2	chr19	-	705	4	FSM	ENSMUSG00000079478.10	ENSMUST00000159693.2	705	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	231.015631986717	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGTTTGTTCTTTCTTGG	NA	False	NA	-1	True	AAAACA	-13	NA	5781760	5780334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5780741_5781268_5781354_5781466_5781624_5781703
ENSMUST00000159697.2	chr17	-	1800	8	FSM	ENSMUSG00000023832.15	ENSMUST00000159697.2	1800	8	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_2	94.6542580734146	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGCAGGGCCCCCAAAA	NA	False	NA	NA	False	NA	NA	NA	13179258	13162329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881
ENSMUST00000159706.8	chr1	+	557	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	0	0	0	0	multi-exon	TRUE	canonical	3	3085	junction_7	1053.46856146731	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862636	160866107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000159706.8-0	chr1	+	460	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	99	-2	0	0	multi-exon	FALSE	canonical	3	3085	junction_7	1053.46856146731	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000159715.8	chr15	-	3796	12	FSM	ENSMUSG00000037280.13	ENSMUST00000159715.8	3796	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	26.9471475360673	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTTGGATTTGAGTT	9875	False	NA	-7	True	AATAAA	-19	NA	100627257	100589693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100591348_100592450_100592604_100594427_100594530_100594999_100595132_100595658_100595860_100596997_100597116_100601228_100601464_100601991_100602142_100611976_100612150_100613808_100614396_100617895_100618117_100627187
ENSMUST00000159730.2	chr15	+	2077	3	FSM	ENSMUSG00000022386.13	ENSMUST00000159730.2	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGTCTGGGGCTTGCC	1982	False	NA	NA	False	AATAAA	-16	NA	85779081	85781595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85780706_85781035_85781119_85781225
ENSMUST00000159739.8	chr3	-	1939	5	FSM	ENSMUSG00000038550.11	ENSMUST00000159739.8	1939	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	14.8723737177358	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTTTTTTTTTTTTTT	NA	False	NA	-1	True	ATTAAA	-15	NA	95789517	95785814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492
ENSMUST00000159759.3	chr19	+	1528	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACACTGTCCTGATGGTT	247	False	NA	34	True	AATAAA	-35	NA	5475171	5477341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5475337_5475978
ENSMUST00000159771.8	chr15	+	1446	6	FSM	ENSMUSG00000033287.18	ENSMUST00000159771.8	986	6	0	-460	0	0	multi-exon	FALSE	canonical	3	32	junction_5	37.5819105421744	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	24	True	AATAAA	-31	NA	78312861	78323503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78322686
ENSMUST00000159774.7	chr3	+	4455	13	FSM	ENSMUSG00000037818.17	ENSMUST00000159774.7	4455	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7.57554545157567	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTTGTGGTTTGTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	40848579	40892573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306_40871394_40873814_40873841_40877847_40877987_40884571_40884662_40885315_40885418_40887958_40888338_40889301_40889465_40889776
ENSMUST00000159786.8	chr5	-	6333	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_15	15.1314242555022	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGACTCCTTGATCTGA	NA	False	NA	-70	True	AATAAA	-16	NA	66776006	66456182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ENSMUST00000159810.8	chr10	+	4171	21	FSM	ENSMUSG00000090112.9	ENSMUST00000159810.8	4171	21	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_14	19.7809883474006	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGGAATATAAGGTACA	NA	False	NA	NA	False	NA	NA	NA	11025170	11063894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047746_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683
ENSMUST00000159813.8	chr5	-	1341	8	FSM	ENSMUSG00000001844.11	ENSMUST00000159813.8	1341	8	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_2	78.3753397284568	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTTTTCTCATCATT	5305	False	NA	-14	True	AATACA	-25	NA	143314975	143302244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143302588_143305985_143306231_143307509_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUST00000159814.2	chr1	-	3997	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGGAGGCGTTTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	88629943	88625946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_88625900_88629900
ENSMUST00000159817.9	chr1	-	2482	8	FSM	ENSMUSG00000026694.20	ENSMUST00000159817.9	2482	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	33.4651814181089	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAAAGTTGGTTTATCT	NA	False	NA	-11	True	NA	NA	NA	162376091	162361247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373814_162374097_162375672
ENSMUST00000159837.2	chr18	+	623	2	FSM	ENSMUSG00000024646.15	ENSMUST00000159837.2	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATATGTGTCTGTCTGT	NA	False	NA	12	True	AATATA	-17	NA	84895725	84897989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_84895987_84897627
ENSMUST00000159840.8	chr4	-	3574	15	FSM	ENSMUSG00000028931.13	ENSMUST00000159840.8	3574	15	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_13	3.78773530958939	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATCTCTCCTTTCCT	NA	False	NA	-2	True	AATAAA	-24	NA	152533297	152475198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152520261_152520395_152533134
ENSMUST00000159846.2	chr18	+	773	3	FSM	ENSMUSG00000024646.15	ENSMUST00000159846.2	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_1	30	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTAAGCCGTATCTTGA	NA	False	NA	NA	False	AGTAAA	-25	NA	84869531	84891707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_84869733_84889629_84889759_84891264
ENSMUST00000159879.2	chr1	-	3956	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	0	4782	0	276	multi-exon	FALSE	canonical	3	15	junction_2	6.34428877022476	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCAACAGATAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	143652806	143631309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
ENSMUST00000159883.2	chr12	-	879	9	FSM	ENSMUSG00000021189.12	ENSMUST00000159883.2	879	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	92.3612980365694	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTTGCATATTTAATA	NA	False	NA	-25	True	AGTAAA	-15	NA	101924407	101899207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914305_101914533_101914699_101924392
ENSMUST00000159899.8	chr3	+	1553	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	6	3178	0	0	multi-exon	FALSE	canonical	3	317	junction_8	39.6252444787411	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTGTGTGTGCTGTC	3963	False	NA	33	True	AGTAAA	-37	NA	152419742	152491485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ENSMUST00000159907.3	chr5	+	1037	3	FSM	ENSMUSG00000029221.16	ENSMUST00000159907.3	383	3	-219	-435	0	435	multi-exon	FALSE	canonical	3	16	junction_2	210.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTTTTTTTTTAATT	396	False	NA	NA	False	AATAAA	-12	NA	67464307	67476693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_67464541_67473020_67473189_67476057
ENSMUST00000159910.8	chr13	-	8332	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_8	8.56786344567119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACATTTTGT	2793	False	NA	NA	False	AAAACA	-14	NA	89890441	89804458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ENSMUST00000159910.8-0	chr13	-	7896	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	-241	677	-54	0	multi-exon	FALSE	canonical	3	34	junction_8	8.56786344567119	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTTCAGCCTATCTAA	2552	False	NA	-3	True	AATAAA	-27	NA	89890682	89805135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ENSMUST00000159917.8	chr10	-	2491	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	203.876012741638	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACCAGTCTGGATCCTT	NA	False	NA	-8	True	AATAAA	-12	NA	7539067	7505144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUST00000159918.2	chr1	-	1404	3	FSM	ENSMUSG00000041889.8	ENSMUST00000159918.2	1404	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATGAGTCCGTCCTTC	NA	False	NA	0	True	NA	NA	NA	135301188	135298797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135299735_135299934_135300103_135300889
ENSMUST00000159920.2	chr7	-	3381	5	FSM	ENSMUSG00000062040.15	ENSMUST00000159920.2	3381	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	18.9802528961023	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTTCTCTTCTGTCAC	NA	False	NA	0	True	AATATA	-16	NA	29605957	29593140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605675
ENSMUST00000159939.8	chr15	-	3639	13	FSM	ENSMUSG00000016624.16	ENSMUST00000159939.8	3639	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.72677996249965	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCGGTGGTCCTGTGT	NA	False	NA	-7	True	ATTAAA	-10	NA	84740250	84669584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_84671651_84675265_84675370_84675554_84675631_84675983_84676143_84678096_84678120_84679280_84679336_84681523_84681601_84682843_84682896_84687654_84687787_84688960_84689312_84692266_84692360_84738939_84739006_84739865
ENSMUST00000159940.2	chr8	+	2184	4	FSM	ENSMUSG00000025812.19	ENSMUST00000159940.2	746	4	0	-1438	0	0	multi-exon	FALSE	canonical	3	17	junction_1	28.2410261066335	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128306204	128338767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_128306285_128319541_128319663_128329539_128329668_128336912
ENSMUST00000159951.8	chr14	-	5043	19	FSM	ENSMUSG00000033083.17	ENSMUST00000159951.8	5043	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.78691507545224	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGAGCTTTTTTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	101744762	101679803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101698134_101698138_101700310_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523
ENSMUST00000159962.8	chr16	+	2805	4	FSM	ENSMUSG00000022792.17	ENSMUST00000159962.8	2805	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	149.404001136367	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGATATATTTCTGTT	9506	False	NA	NA	False	GATAAA	-20	NA	16120828	16126806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16121612_16122399_16122568_16124361_16124483_16125073
ENSMUST00000159970.2	chr9	+	3146	8	FSM	ENSMUSG00000032086.13	ENSMUST00000159970.2	3146	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.94110977696417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	45764020	45773517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_45764275_45765924_45765954_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUST00000159976.8	chr3	-	7236	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	12.9144191593049	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTCTGTGTTATTTTA	NA	False	NA	NA	False	AAAAAG	-3	NA	87082007	86985899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
ENSMUST00000159983.8	chr19	-	2470	10	FSM	ENSMUSG00000024972.17	ENSMUST00000159983.8	2470	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	5.03322295684717	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCATATGTTAGTGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	7584558	7574024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7575537_7576124_7576276_7578012_7578102_7578610_7578638_7579407_7579447_7580373_7580494_7581333_7581548_7581668_7581758_7584026_7584189_7584491
ENSMUST00000159986.8	chr17	-	3187	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	176.193756983612	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGTGATTCCTTCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	13211079	13191571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ENSMUST00000159990.2	chr10	+	3449	11	FSM	ENSMUSG00000019952.16	ENSMUST00000159990.2	3449	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	9.48946784598589	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTCTTCTCTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	98942964	99033936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ENSMUST00000160004.2	chr5	+	405	2	FSM	ENSMUSG00000038722.18	ENSMUST00000160004.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTTGGAGAATGCGTGT	NA	False	NA	NA	False	NA	NA	NA	145077205	145078472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145077253_145078114
ENSMUST00000160005.2	chr8	+	3781	5	FSM	ENSMUSG00000004637.16	ENSMUST00000160005.2	3781	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	47.8663503935698	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTAGGTGGCTTTTGGG	NA	False	NA	6	True	AATAAA	-6	NA	115166441	115180558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115177256
ENSMUST00000160008.2	chr4	-	1547	6	FSM	ENSMUSG00000035495.16	ENSMUST00000160008.2	1547	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_5	18.8722017793367	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGAGTAACATTTA	18	True	NA	NA	False	NA	NA	NA	46138413	46123404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ENSMUST00000160009.2	chr15	+	1765	2	FSM	ENSMUSG00000022346.18	ENSMUST00000160009.2	1765	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTAAGACATGTACCAT	NA	False	NA	NA	False	AATAAA	-22	NA	61859270	61862102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_61860128_61861194
ENSMUST00000160013.8	chr14	-	3826	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	22.3755819291179	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACGGGGTCACTTTC	NA	False	NA	-4	True	AATAAA	-18	NA	20027317	19922626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
ENSMUST00000160027.8	chr12	+	2846	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	0	0	0	0	multi-exon	FALSE	canonical	3	3391	junction_8	417.753084967664	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTAAACTTAGAACCTT	4720	False	NA	NA	False	ATTAAA	-29	NA	71021394	71043121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000160047.8	chr3	+	1196	4	FSM	ENSMUSG00000050150.17	ENSMUST00000160047.8	1196	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	29.6348143611905	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGGTCTTCAAATTTAA	NA	False	NA	14	True	AATAAA	-25	NA	135053806	135063828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217
ENSMUST00000160052.2	chr9	+	444	1	FSM	ENSMUSG00000090136.5	ENSMUST00000160052.2	444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	532	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATGGGGCAAGCTCA	NA	False	NA	NA	False	AATAAA	-43	NA	37164217	37164661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37164200_37164700
ENSMUST00000160061.2	chr5	-	442	3	FSM	ENSMUSG00000001844.11	ENSMUST00000160061.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	85	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGCTAGTCTGGAAGGC	5333	False	NA	NA	False	NA	NA	NA	143314947	143311810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143311979_143314145_143314326_143314853
ENSMUST00000160074.8	chr3	-	1620	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160074.8	1620	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	36.9357550349252	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	NA	False	NA	-22	True	TATAAA	-27	NA	87835565	87830964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230
ENSMUST00000160075.2	chr5	+	928	6	FSM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	298.93035978301	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTACATTCTTTCTTTT	NA	False	NA	13	True	AATAAA	-14	NA	145077224	145084881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUST00000160085.2	chr12	-	676	4	FSM	ENSMUSG00000054302.16	ENSMUST00000160085.2	676	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	197.249982396845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAATAACCTTATCTAAT	NA	False	NA	NA	False	NA	NA	NA	54742647	54736895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54737142_54738784_54738881_54739559_54739742_54742495
ENSMUST00000160113.8	chr12	-	2019	7	FSM	ENSMUSG00000079036.11	ENSMUST00000160113.8	2019	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	112.096312755297	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490596	87474846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
ENSMUST00000160114.2	chr17	+	3315	8	FSM	ENSMUSG00000042203.9	ENSMUST00000160114.2	3315	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	15.914311361867	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCGGGGCTTTGGTTTCCT	NA	False	NA	10	True	AATAAA	-16	NA	29791396	29825868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ENSMUST00000160144.9	chr10	-	4323	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	74.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGTTTCAACTTTTC	NA	False	NA	2	True	AATAAA	-20	NA	29238438	29220171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29223880_29230287_29230444_29237979
ENSMUST00000160144.9-0	chr10	-	2514	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	416	1393	0	607	multi-exon	FALSE	canonical	3	77	junction_2	74.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTTGGGTTATGTGTT	NA	False	NA	NA	False	AGTAAA	-15	NA	29238022	29221564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29223880_29230287_29230444_29237979
ENSMUST00000160147.8	chr9	+	3820	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	0	0	0	0	multi-exon	FALSE	canonical	2	160	junction_17	33.744593641056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGCAGCCAGCCTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	57037973	57050006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ENSMUST00000160157.2	chr5	+	980	3	FSM	ENSMUSG00000050552.9	ENSMUST00000160157.2	980	3	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	14	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACAGAATGGTTTG	NA	False	NA	38	True	AATAAA	-30	NA	138254092	138257660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138254596_138256916_138257035_138257301
ENSMUST00000160163.8	chr6	-	3289	15	FSM	ENSMUSG00000040669.15	ENSMUST00000160163.8	3289	15	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_12	285.154952506134	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACACCTACCCTAATCCA	9122	False	NA	-11	True	AATAAA	-14	NA	122316571	122295261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ENSMUST00000160180.9	chr18	+	833	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_4	54.2425110038243	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTCTGTTTGGTGT	NA	False	NA	19	True	AATATA	-24	NA	84869462	84897996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
ENSMUST00000160196.2	chr3	-	697	3	FSM	ENSMUSG00000027835.12	ENSMUST00000160196.2	697	3	0	0	0	0	multi-exon	FALSE	canonical	3	1269	junction_1	63	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCTGAAAGTTGTATATG	NA	False	NA	NA	False	NA	NA	NA	75428877	75424834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_75424909_75428008_75428092_75428337
ENSMUST00000160197.6	chr6	-	5439	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_13	26.9684454901315	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046495	84595468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ENSMUST00000160226.8	chr3	-	617	3	FSM	ENSMUSG00000027860.16	ENSMUST00000160226.8	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	64	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTATGTACTTGTGTG	NA	False	NA	-11	True	NA	NA	NA	102074289	102070501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_102070850_102072670_102072804_102074153
ENSMUST00000160245.2	chr8	-	814	2	FSM	ENSMUSG00000031781.15	ENSMUST00000160245.2	814	2	0	0	0	0	multi-exon	FALSE	canonical	3	1537	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTGTCTTGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	95550821	95549562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95549836_95550280
ENSMUST00000160260.9	chr1	-	2639	17	FSM	ENSMUSG00000026565.19	ENSMUST00000160260.9	13022	17	49	10334	0	0	multi-exon	FALSE	canonical	2	8	junction_3	5.36153837531729	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAAAATTTTAAAAGAAA	9694	False	NA	-9	True	AATAAA	-45	NA	165830198	165703056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
ENSMUST00000160269.2	chr17	+	1162	5	FSM	ENSMUSG00000024146.10	ENSMUST00000160269.2	763	5	-61	-338	0	0	multi-exon	FALSE	canonical	2	8	junction_1	278.799210902757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	False	NA	4	True	AATAAA	-14	NA	87332977	87343238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87333082_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUST00000160271.8	chr4	-	2604	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_17	99.0531349615264	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	108975233	108918846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ENSMUST00000160272.8	chr8	+	5815	25	FSM	ENSMUSG00000025812.19	ENSMUST00000160272.8	5815	25	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_17	33.9451917311814	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	127790805	128338767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
ENSMUST00000160276.2	chr2	+	2971	6	FSM	ENSMUSG00000037902.19	ENSMUST00000160276.2	876	6	-51	-2044	0	0	multi-exon	FALSE	canonical	3	15	junction_2	39.9729908813439	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGGGGTGTTCCATT	NA	False	NA	NA	False	AATAAA	-20	NA	129435481	129474148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129435615_129450823_129451181_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ENSMUST00000160289.9	chr7	-	1435	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_1	62.2636330453018	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130149111	130134255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ENSMUST00000160326.8	chr16	-	4488	31	FSM	ENSMUSG00000022710.18	ENSMUST00000160326.8	4488	31	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_28	198.142330998031	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	6532	False	NA	NA	False	AATAAA	-21	NA	8556284	8507463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529996_8530057_8534378_8534484_8556067
ENSMUST00000160337.2	chr10	+	1138	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_7	327.562862014955	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	False	NA	13	True	ATTAAA	-14	NA	72490727	72504997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUST00000160349.2	chr17	+	3139	8	FSM	ENSMUSG00000025737.6	ENSMUST00000160349.2	3139	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	15.8449116277055	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTGGCCACTTGTCA	NA	False	NA	9	True	AATAAA	-11	NA	26042622	26047695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
ENSMUST00000160352.8	chr5	+	5322	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTTTAGAAATGCTATG	NA	False	NA	NA	False	AATAAA	-18	NA	67418039	67448804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ENSMUST00000160352.8-0	chr5	+	1874	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	-1	3449	0	1353	multi-exon	FALSE	canonical	3	67	junction_8	122.604483502847	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTACAAGATGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	67418038	67445355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ENSMUST00000160359.2	chr9	+	3663	20	FSM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	23.4907891420283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAACATTGTGCCTCT	NA	False	NA	NA	False	NA	NA	NA	92424316	92490473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ENSMUST00000160360.2	chr6	-	3907	15	FSM	ENSMUSG00000061436.16	ENSMUST00000160360.2	3907	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.33785195053803	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAATGTTAGTA	NA	False	NA	NA	False	AAAAAG	-15	NA	38852905	38674823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_38675532_38676186_38676351_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698530_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ENSMUST00000160372.9	chr10	-	1948	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	66.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	29238043	29222171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29223880_29230287_29230444_29237959
ENSMUST00000160403.8	chr7	+	1425	7	FSM	ENSMUSG00000054065.13	ENSMUST00000160403.8	1425	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	7.83156008298049	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCCAGCTCCGTGTGT	614	False	NA	16	True	ATTAAA	-14	NA	140668058	140670420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ENSMUST00000160405.8	chr16	-	4745	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	0	0	0	0	multi-exon	FALSE	canonical	2	419	junction_31	128.599831855963	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGCTGTGGAAGCCGAG	NA	False	NA	NA	False	AATAAA	-26	NA	8610172	8507458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ENSMUST00000160422.8	chr5	+	1756	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	266.097419631784	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	False	NA	22	True	ATTAAA	-14	NA	145104056	145118850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
ENSMUST00000160429.8	chr1	+	759	10	FSM	ENSMUSG00000053332.14	ENSMUST00000160429.8	759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_6	1099.1542202985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGTGAAGTGTGCAT	NA	False	NA	17	True	ATTAAA	-13	NA	160862735	160866104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000160430.3	chr6	+	3906	8	FSM	ENSMUSG00000029823.17	ENSMUST00000160430.3	3906	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	16.4267079688499	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTATATAACTTCAAGTA	NA	False	NA	NA	False	NA	NA	NA	38547036	38582961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211
ENSMUST00000160437.2	chr5	+	2971	6	FSM	ENSMUSG00000029625.17	ENSMUST00000160437.2	2971	6	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_5	66.0502838752416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	2699	False	NA	23	True	ATTAAA	-15	NA	145107352	145118851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145115739_145117945
ENSMUST00000160439.8	chr1	+	1206	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	30.0361921605614	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGCTGTTTCTTTTTC	2032	False	NA	16	True	AGTAAA	-22	NA	75145289	75148273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ENSMUST00000160444.8	chr19	-	793	5	FSM	ENSMUSG00000024792.10	ENSMUST00000160444.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_4	111.24522461661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGGCACACGGTGAGC	6489	False	NA	NA	False	NA	NA	NA	6134924	6132224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134824
ENSMUST00000160455.8	chr19	-	2952	20	FSM	ENSMUSG00000025188.16	ENSMUST00000160455.8	2952	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	35.0087444557164	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAAGCCTGTCCCTGGC	NA	False	NA	-5	True	AATAAA	-17	NA	42768415	42743636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755124_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
ENSMUST00000160477.8	chr12	-	2878	11	FSM	ENSMUSG00000021266.17	ENSMUST00000160477.8	2878	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	772.921237902026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108860063	108825955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108850190_108850275_108854301_108854475_108859994
ENSMUST00000160480.2	chr7	+	3580	7	FSM	ENSMUSG00000059851.16	ENSMUST00000160480.2	1270	7	-1694	-616	0	0	multi-exon	FALSE	canonical	3	6	junction_1	247.867852337132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_4744981_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUST00000160483.9	chr17	+	1504	9	FSM	ENSMUSG00000041831.18	ENSMUST00000160483.9	1504	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	5.52268050859363	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAACTCCCAGCATTTAT	NA	False	NA	6	True	AATAAA	-15	NA	6973228	7005443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
ENSMUST00000160507.8	chr14	+	2229	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGAGTTATGGGTTTT	NA	False	NA	11	True	AATAAA	-14	NA	73790104	73833582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUST00000160507.8-0	chr14	+	1633	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	101	495	0	-136	multi-exon	FALSE	canonical	3	1524	junction_2	74.4957045741565	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGGTCTCTTTTCT	NA	False	NA	14	True	TATAAA	-17	NA	73790205	73833087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUST00000160556.8	chr19	+	1795	11	FSM	ENSMUSG00000071657.13	ENSMUST00000160556.8	1795	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	47.8256207487158	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	False	NA	13	True	AATAAA	-13	NA	8816691	8826030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8817149_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUST00000160561.3	chr19	+	4064	3	FSM	ENSMUSG00000053080.11	ENSMUST00000160561.3	4064	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	13.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCACAGCCAACTTAGT	NA	False	NA	NA	False	AATAAA	-18	NA	7398392	7402905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7399010_7399278_7399828_7400007
ENSMUST00000160570.2	chr1	+	3704	9	FSM	ENSMUSG00000039210.17	ENSMUST00000160570.2	3704	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	10.974402033824	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	186958376	187083624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ENSMUST00000160576.2	chr12	-	1852	2	FSM	ENSMUSG00000049792.7	ENSMUST00000160576.2	1852	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGATGTTGCAAACGA	NA	False	NA	-67	True	NA	NA	NA	111679361	111676337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111677847_111679018
ENSMUST00000160579.2	chr16	-	1376	2	FSM	ENSMUSG00000022858.17	ENSMUST00000160579.2	1376	2	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCTATGGCAAATTTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	22084668	22076813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22078012_22084490
ENSMUST00000160583.8	chr6	+	4460	17	FSM	ENSMUSG00000038538.18	ENSMUST00000160583.8	14644	17	0	10184	0	0	multi-exon	FALSE	canonical	3	23	junction_13	12.8900094550004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	18	True	NA	NA	NA	38410884	38479514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ENSMUST00000160590.2	chr19	-	840	2	FSM	ENSMUSG00000024797.15	ENSMUST00000160590.2	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGGTAACTTTTGTTTC	1018	False	NA	1	True	ATTAAA	-20	NA	6127230	6125932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6126523_6126980
ENSMUST00000160591.8	chr1	-	2126	14	FSM	ENSMUSG00000026709.11	ENSMUST00000160591.8	2126	14	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	32.3146512651852	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAAAAATTGAGCCTA	NA	False	NA	NA	False	NA	NA	NA	160898177	160872752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUST00000160597.8	chr16	+	6230	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_5	76.2263931339013	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCTTTCTCCCTACACT	NA	False	NA	NA	False	NA	NA	NA	29398151	29473702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUST00000160597.8-0	chr16	+	3181	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	44	3005	0	0	multi-exon	FALSE	canonical	3	145	junction_5	76.2263931339013	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACGTGTGTTCCAGGCAC	NA	False	NA	9	True	AATAAA	-19	NA	29398195	29470697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUST00000160601.2	chr18	-	426	2	FSM	ENSMUSG00000024558.13	ENSMUST00000160601.2	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTCTGAAGCCTCTGAAG	9388	False	NA	NA	False	NA	NA	NA	74198430	74104240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_74104348_74198111
ENSMUST00000160629.8	chr5	+	1713	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	186.36939400129	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTTTCATTACTTAA	NA	False	NA	23	True	ATTAAA	-15	NA	145104022	145118851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUST00000160635.8	chr15	+	2384	11	FSM	ENSMUSG00000023010.16	ENSMUST00000160635.8	871	11	0	-1513	0	0	multi-exon	FALSE	canonical	3	18	junction_1	734.518481727996	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290866	99307930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99290922_99291575_99291612_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000160640.8	chr3	+	2510	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGGAAAACACAGAGCA	NA	False	NA	NA	False	NA	NA	NA	89960120	89970648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
ENSMUST00000160640.8-0	chr3	+	1614	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	0	896	0	0	multi-exon	FALSE	canonical	3	422	junction_3	33.2549077413979	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCATTTCTTTAGAGTG	NA	False	NA	10	True	AATAAA	-20	NA	89960120	89969752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
ENSMUST00000160648.8	chr3	-	3157	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	31.4046174948844	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGACCTCTGAGTTCC	9460	False	NA	-2	True	NA	NA	NA	87837434	87829907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
ENSMUST00000160648.8-0	chr3	-	2117	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160648.8	3157	7	-17	1057	0	0	multi-exon	FALSE	canonical	3	33	junction_5	31.4046174948844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9443	False	NA	-22	True	TATAAA	-27	NA	87837451	87830964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_87831220_87831650_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230_87835356_87837162
ENSMUST00000160653.2	chr13	-	2586	10	FSM	ENSMUSG00000038991.18	ENSMUST00000160653.2	2586	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	335.794947718962	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTCTGGTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	38711890	38684248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38711650
ENSMUST00000160664.8	chr17	+	3784	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	42.2814078706415	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATGGGAGAAAGGCGT	NA	False	NA	31	True	AATAAA	-28	NA	66090360	66148917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUST00000160681.2	chr10	+	2887	5	FSM	ENSMUSG00000020246.14	ENSMUST00000160681.2	2887	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	8.1967981553775	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCCAAATTGTATTTTTT	NA	False	NA	10	True	AATAAA	-18	NA	82564182	82577229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
ENSMUST00000160683.8	chr12	+	1027	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160683.8	1027	10	0	0	0	0	multi-exon	FALSE	canonical	3	3391	junction_7	435.06460425613	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGTTGGGTAATTGA	4770	False	NA	1	True	ATTAAA	-12	NA	71021444	71041275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000160696.8	chr6	-	4213	15	FSM	ENSMUSG00000040669.15	ENSMUST00000160696.8	4213	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	298.331037881185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9870	False	NA	-31	True	ATTAAA	-22	NA	122315823	122294708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122315430
ENSMUST00000160708.8	chr8	+	2908	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCGGCTTCCTAGTAAC	4387	False	NA	NA	False	NA	NA	NA	3680954	3693644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUST00000160708.8-0	chr8	+	1861	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	198	849	0	0	multi-exon	FALSE	canonical	3	307	junction_10	31.5352536413174	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUST00000160722.8	chr2	-	931	7	FSM	ENSMUSG00000027165.17	ENSMUST00000160722.8	931	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	53.9475053485639	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCTCTGTGGAAATGTA	NA	False	NA	-20	True	AATAAA	-15	NA	101479877	101392468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101479766
ENSMUST00000160734.8	chr17	-	1569	14	FSM	ENSMUSG00000001524.15	ENSMUST00000160734.8	1569	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	50.3611806921766	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAATCTACGCGGCT	NA	False	NA	-12	True	AATAAA	-6	NA	35984510	35978632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984425
ENSMUST00000160772.2	chr6	+	6067	2	FSM	ENSMUSG00000030232.19	ENSMUST00000160772.2	480	2	-182	-5405	-182	-623	multi-exon	FALSE	canonical	3	325	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTCACATGTGTCTAT	707	False	NA	NA	False	AATAAA	-23	NA	140592360	140599521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_140592604_140593697
ENSMUST00000160776.2	chr13	-	909	4	FSM	ENSMUSG00000039233.13	ENSMUST00000160776.2	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	12.4988888395018	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCAGGGCTACACAGAG	NA	False	NA	NA	False	NA	NA	NA	14214202	14193859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUST00000160781.8	chr17	-	2442	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	236.32384560175	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATTGGATCTTTTGTA	NA	False	NA	NA	False	AGTAAA	-29	NA	13211433	13192438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ENSMUST00000160784.8	chr15	+	1998	15	FSM	ENSMUSG00000022550.19	ENSMUST00000160784.8	1998	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	36.6848826118457	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3133	False	NA	NA	False	AAGAAA	-1	NA	76460588	76480016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479643_76479738
ENSMUST00000160786.8	chr1	+	1645	8	FSM	ENSMUSG00000026150.15	ENSMUST00000160786.8	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	134.32947615198	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTATAAATGTAGTGTAT	NA	False	NA	-27	True	TTTAAA	-13	NA	82702660	82730071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUST00000160801.8	chr13	+	3062	14	FSM	ENSMUSG00000042015.18	ENSMUST00000160801.8	3062	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.9884094300195	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGGGTTTGTTTTTT	NA	False	NA	15	True	AATATA	-16	NA	95112855	95159821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136019_95136023_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ENSMUST00000160805.8	chr14	+	3013	8	FSM	ENSMUSG00000055717.14	ENSMUST00000160805.8	1998	8	-418	-597	0	0	multi-exon	FALSE	canonical	3	18	junction_2	16.4812818998167	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGCTCACGCATGAATG	NA	False	NA	27	True	AATAAA	-17	NA	103887663	103942343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_103888345_103894368_103894509_103921669_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ENSMUST00000160826.2	chr11	-	2746	3	FSM	ENSMUSG00000098650.2	ENSMUST00000160826.2	2746	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1098	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTATAATAAGTGATACTCT	NA	False	NA	-25	True	AATAAA	-24	NA	22932090	22784743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_22787196_22906410_22906693_22932078
ENSMUST00000160834.8	chr1	+	8869	55	FSM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	0	6862	0	0	multi-exon	TRUE	canonical	1	1	junction_10	5.85232065632702	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGAGAGATGTGGCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	60219757	60370625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ENSMUST00000160835.9	chr14	-	2755	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGTGTCCGTTAGTCAC	NA	False	NA	NA	False	TATAAA	-16	NA	51168306	51163524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ENSMUST00000160835.9-1	chr14	-	2407	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	-7	355	0	-355	multi-exon	FALSE	canonical	3	698	junction_6	55.5447767321305	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGTCTAAGAAAAAGTA	NA	False	NA	NA	False	AATAAA	-21	NA	51168313	51163879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ENSMUST00000160850.2	chr12	-	1423	4	FSM	ENSMUSG00000079036.11	ENSMUST00000160850.2	1423	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	44.3195467285285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCATAAAAACTAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	87490609	87480026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUST00000160852.8	chr19	-	2532	5	FSM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	171.430744033852	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGATTGCCTGGTTAAT	NA	False	NA	-2	True	AATAAA	-16	NA	5781741	5778115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471_5781624_5781703
ENSMUST00000160853.8	chr15	+	1651	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	163.413086179455	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235493	76238573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUST00000160859.8	chr13	-	2443	9	FSM	ENSMUSG00000021638.13	ENSMUST00000160859.8	2443	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	25.6706909723911	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACCACTGTTTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	100688989	100634621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688879
ENSMUST00000160864.8	chr12	+	859	10	FSM	ENSMUSG00000060073.10	ENSMUST00000160864.8	859	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1213.70727855801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4782	False	NA	5	True	ATTAAA	-16	NA	71021456	71041279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71021542_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000160870.8	chr5	-	6526	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	31.1528489868904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTTAGTAATGGGAGGT	NA	False	NA	-2	True	ATTAAA	-13	NA	66776024	66456070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ENSMUST00000160874.8	chr9	+	412	5	FSM	ENSMUSG00000084786.10	ENSMUST00000160874.8	412	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	478.321740567999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGCTGCTGTCATACTT	NA	False	NA	16	True	AATAAA	-13	NA	20556130	20558071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20556190_20556488_20556556_20556701_20556790_20556917_20556956_20557911
ENSMUST00000160877.8	chr6	+	948	3	FSM	ENSMUSG00000030166.15	ENSMUST00000160877.8	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAAGTTTCCTGTGGAT	NA	False	NA	NA	False	NA	NA	NA	119879665	119890685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_119879797_119888008_119888103_119889962
ENSMUST00000160878.8	chr6	-	2314	13	FSM	ENSMUSG00000003500.14	ENSMUST00000160878.8	2314	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	66.32762747654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGATCCTGTTTCTGT	17	True	NA	-1	True	AATAAA	-19	NA	29212248	29200435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29207093_29207196_29209218_29209268_29212067
ENSMUST00000160884.9	chr4	-	3961	16	FSM	ENSMUSG00000028931.13	ENSMUST00000160884.9	3961	16	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_13	3.63684845252956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTGATCTCTCCTTTC	NA	False	NA	-4	True	AATAAA	-22	NA	152562367	152475200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152519238_152519281_152520261_152520395_152561857
ENSMUST00000160885.2	chr17	-	1732	4	FSM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	32.9983164553722	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTGCGTTGAATCTAAG	9372	False	NA	-8	True	AATAAA	-17	NA	35827682	35823633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35824082_35825370_35825918_35826774_35827437_35827607
ENSMUST00000160889.8	chr1	-	2694	6	FSM	ENSMUSG00000089872.11	ENSMUST00000160889.8	2694	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	16.963490206912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCCTCATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	190566233	190505075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190566202
ENSMUST00000160898.2	chr8	-	774	2	FSM	ENSMUSG00000031781.15	ENSMUST00000160898.2	774	2	0	0	0	0	multi-exon	FALSE	canonical	3	1713	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTCCAATTGTGTACT	NA	False	NA	NA	False	NA	NA	NA	95553340	95551263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95551960_95553262
ENSMUST00000160902.8	chr9	+	3374	26	FSM	ENSMUSG00000032115.15	ENSMUST00000160902.8	3374	26	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	146.389890361322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATACATCAGGGTTG	NA	False	NA	NA	False	NA	NA	NA	44290919	44302399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUST00000160902.8-0	chr9	+	4685	26	FSM	ENSMUSG00000032115.15	ENSMUST00000160902.8	3374	26	-50	-1261	0	0	multi-exon	FALSE	canonical	3	130	junction_1	146.389890361322	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290869	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUST00000160916.8	chr15	+	1146	4	FSM	ENSMUSG00000033287.18	ENSMUST00000160916.8	1146	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	32.7515902921777	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTCGAGCCGACTTTTT	133	False	NA	NA	False	NA	NA	NA	78317186	78321934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78317277_78318114_78318211_78319784_78319911_78321100
ENSMUST00000160918.8	chr6	-	1753	9	FSM	ENSMUSG00000054474.16	ENSMUST00000160918.8	2077	9	92	232	0	0	multi-exon	TRUE	canonical	1	2	junction_8	2.47171499166065	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGGTGTTTTGTTTTGTT	NA	False	NA	0	True	NA	NA	NA	71121331	71105381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71105837_71106195_71106348_71108631_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203_71118439_71121274
ENSMUST00000160959.8	chr3	-	975	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	7	2010	0	0	multi-exon	FALSE	canonical	3	518	junction_3	10.5593560409714	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATTTCTAGACAGTTC	NA	False	NA	-11	True	AATAAA	-19	NA	57559129	57553779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ENSMUST00000160972.8	chr1	+	1358	5	FSM	ENSMUSG00000026150.15	ENSMUST00000160972.8	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_3	77.3090389281874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82706949	82730111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
ENSMUST00000160974.2	chr12	-	652	3	FSM	ENSMUSG00000021266.17	ENSMUST00000160974.2	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	1889	junction_1	115.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATCAAGAGACATTTACA	NA	False	NA	NA	False	NA	NA	NA	108854343	108846681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108847078_108848620_108848835_108854301
ENSMUST00000160989.8	chr13	+	2976	10	FSM	ENSMUSG00000021666.17	ENSMUST00000160989.8	2976	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_9	25.0973413574003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	2651	False	NA	NA	False	AATAAA	-25	NA	97296674	97312959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUST00000161008.8	chr14	-	5099	28	FSM	ENSMUSG00000033004.17	ENSMUST00000161008.8	5099	28	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_23	9.27154740163962	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTGTAAAGTATTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	103392699	103350846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384466_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559
ENSMUST00000161011.8	chr12	-	1000	9	FSM	ENSMUSG00000021189.12	ENSMUST00000161011.8	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	19.5380238253514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTTTGTCTGTTTATA	NA	False	NA	-2	True	ATTAAA	-19	NA	101924502	101899184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914699_101924392
ENSMUST00000161012.8	chr17	-	1665	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	21.6846079563875	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCGTTGAATCTAAGTCT	9333	False	NA	-5	True	AATAAA	-20	NA	35827721	35823630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
ENSMUST00000161016.8	chr15	+	750	5	FSM	ENSMUSG00000033287.18	ENSMUST00000161016.8	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	15.305227865014	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCAGGCTGGGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	78312890	78320060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784
ENSMUST00000161023.8	chr12	+	399	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	16	2286	0	0	multi-exon	FALSE	canonical	3	3495	junction_2	126.36015546401	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACGTTTTTATTTGAAAT	NA	False	NA	32	True	AATAAA	-19	NA	87490681	87496690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
ENSMUST00000161031.2	chr14	-	1130	10	FSM	ENSMUSG00000068245.15	ENSMUST00000161031.2	1130	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	116.590557184925	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGCTGTTCCTCAGGA	NA	False	NA	NA	False	NA	NA	NA	59602859	59586501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59602815
ENSMUST00000161046.9	chr16	-	4003	31	FSM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	0	0	0	0	multi-exon	FALSE	canonical	2	328	junction_30	128.088897081502	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATACACTGAGAACATTG	6610	False	NA	NA	False	NA	NA	NA	8556206	8508009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ENSMUST00000161051.8	chr7	-	3548	22	FSM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	1631.97883445214	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682224	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991_110682031_110682168
ENSMUST00000161054.8	chr6	-	3612	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_9	201.373802377627	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTTCACAAAACAGGAG	9089	False	NA	-131	True	NA	NA	NA	122316604	122294808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ENSMUST00000161064.8	chr5	+	3294	19	FSM	ENSMUSG00000042605.17	ENSMUST00000161064.8	3294	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	62.3418492895383	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCAGTTAGTGTGTGTT	NA	False	NA	3	True	TTTAAA	-6	NA	121887258	121953012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
ENSMUST00000161074.8	chr10	-	875	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	42.7492689995981	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTGTCTTCAGACACAC	NA	False	NA	NA	False	NA	NA	NA	30494475	30484136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ENSMUST00000161075.8	chr1	+	4018	6	FSM	ENSMUSG00000026502.14	ENSMUST00000161075.8	2590	6	269	-1697	154	1697	multi-exon	FALSE	canonical	3	14	junction_1	77.2321176713419	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015251	178080164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_178015524_178025783_178025857_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ENSMUST00000161086.3	chr13	-	647	2	FSM	ENSMUSG00000021577.15	ENSMUST00000161086.3	647	2	0	0	0	0	multi-exon	FALSE	canonical	3	1612	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGGTATGGTACCACAC	6092	False	NA	NA	False	NA	NA	NA	74487875	74486868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74487331_74487690
ENSMUST00000161094.8	chr5	-	1824	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	0	0	0	0	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGAGATGTGTCAGT	NA	False	NA	NA	False	CATAAA	-21	NA	130053222	130040098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ENSMUST00000161094.8-0	chr5	-	1542	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	36	246	0	0	multi-exon	FALSE	canonical	1	102	junction_3	46.3975686324187	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053186	130040344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ENSMUST00000161108.9	chr5	-	3620	5	FSM	ENSMUSG00000029673.20	ENSMUST00000161108.9	3620	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.1967981553775	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGCCAGAAAAATGAAC	NA	False	NA	NA	False	NA	NA	NA	132571243	131797249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_131799629_132059828_132059865_132079146_132079249_132287762_132287976_132570353
ENSMUST00000161132.9	chr9	-	7605	28	FSM	ENSMUSG00000046111.19	ENSMUST00000161132.10	7605	28	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	25.4723282440542	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATTCCTTTGCTGTCC	9707	False	NA	-5	True	AATAAA	-12	NA	15269084	15228215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ENSMUST00000161137.8	chr3	-	1927	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	0	0	0	0	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTGCTATAAGACAATT	NA	False	NA	-11	True	ATTAAA	-13	NA	75464163	75423796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ENSMUST00000161137.8-1	chr3	-	1397	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	45	485	0	301	multi-exon	FALSE	canonical	3	1188	junction_3	125.646735098117	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGTCCTTAATCAC	NA	False	NA	-16	True	AATAAA	-15	NA	75464118	75424281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ENSMUST00000161154.2	chr12	-	1824	11	FSM	ENSMUSG00000021266.17	ENSMUST00000161154.2	1824	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	739.608714118486	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108859123	108825959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859085
ENSMUST00000161166.8	chr14	-	1445	6	FSM	ENSMUSG00000035953.15	ENSMUST00000161166.8	1445	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	330.807859640608	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168270	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168090
ENSMUST00000161172.3	chr2	-	1041	4	FSM	ENSMUSG00000074656.13	ENSMUST00000161172.3	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	5764.94448272391	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAGAAGAA	3772	False	NA	-51	True	NA	NA	NA	154734715	154726294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154726367_154729623_154729728_154730102_154730281_154734028
ENSMUST00000161186.8	chr16	+	3153	29	FSM	ENSMUSG00000038084.17	ENSMUST00000161186.8	3153	29	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	68.8867378604999	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTGTCAAGTGAGTGAT	NA	False	NA	NA	False	AAGAAA	-41	NA	29398197	29467818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754
ENSMUST00000161187.8	chr9	-	2847	14	FSM	ENSMUSG00000042790.17	ENSMUST00000161187.8	2847	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	14.9741394434206	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAATGCATCTGGGGG	9590	False	NA	NA	False	ATTAAA	-14	NA	45817705	45774988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45817649
ENSMUST00000161189.8	chr1	-	4189	25	FSM	ENSMUSG00000041879.14	ENSMUST00000161189.8	4189	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	161.892405756622	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358229	135312210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135354668_135354780_135358005
ENSMUST00000161191.8	chr16	+	1412	4	FSM	ENSMUSG00000022792.17	ENSMUST00000161191.8	1412	4	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	36.8088153692684	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGTAGAAAATACCTTG	9515	False	NA	NA	False	AATAAA	-17	NA	16120837	16125387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073
ENSMUST00000161202.8	chr15	-	2344	14	FSM	ENSMUSG00000013611.15	ENSMUST00000161202.8	2344	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	9.09385643454255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGATGAATACAGAGTTTG	NA	False	NA	NA	False	AATAAA	-8	NA	36555713	36504557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36505620_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36555592
ENSMUST00000161203.8	chr9	-	3294	15	FSM	ENSMUSG00000042790.17	ENSMUST00000161203.8	3294	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	20.976176963403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCCTGAGTCTTCCTT	9128	False	NA	NA	False	NA	NA	NA	45818167	45774722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45818035
ENSMUST00000161204.8	chr12	-	3262	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	13.7113092008021	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTATGGGGATATTGGA	NA	False	NA	-18	True	AATAAA	-40	NA	79239067	79221110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
ENSMUST00000161211.8	chr12	-	1059	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_7	64.9976451692753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTCCCTTGTCTCTGA	NA	False	NA	1	True	AATAAA	-25	NA	81641780	81620330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ENSMUST00000161218.2	chr11	-	793	2	FSM	ENSMUSG00000044066.15	ENSMUST00000161218.2	793	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTCCATGACTGGAGGA	3090	False	NA	NA	False	NA	NA	NA	20199383	20191522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20192239_20199306
ENSMUST00000161229.8	chr1	+	2556	4	FSM	ENSMUSG00000053332.14	ENSMUST00000161229.8	2556	4	0	0	0	0	multi-exon	FALSE	canonical	3	4541	junction_3	423.601489872524	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000161240.4	chr10	+	5089	1	FSM	ENSMUSG00000090035.4	ENSMUST00000161240.4	5089	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATGATTTTAGTCTAT	NA	False	NA	16	True	AATAAA	-30	NA	98944020	98949109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_98944000_98949100
ENSMUST00000161241.8	chr1	+	2167	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCCCCTGGATGTGAGG	6737	False	NA	NA	False	NA	NA	NA	171238880	171246710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUST00000161241.8-0	chr1	+	1711	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	71	385	0	0	multi-exon	FALSE	canonical	3	185	junction_1	10.3363197596069	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTCTTCCTCCT	6808	False	NA	63	True	GATAAA	-15	NA	171238951	171246325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUST00000161250.8	chr15	+	1148	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAAATTTTTTGATC	NA	False	NA	-27	True	AATGAA	-37	NA	99290866	99306515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000161250.8-0	chr15	+	2563	11	FSM	ENSMUSG00000023010.16	ENSMUST00000161250.8	1148	11	0	-1415	0	0	multi-exon	FALSE	canonical	3	52	junction_1	709.276455269735	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99290866	99307930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99290922_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUST00000161286.8	chr16	-	3403	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	0	0	0	0	multi-exon	TRUE	canonical	3	1235	junction_5	313.549014310363	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATAATGAATACGTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	22084755	22063298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUST00000161286.8-0	chr16	-	2007	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	79	1317	0	582	multi-exon	FALSE	canonical	3	1235	junction_5	313.549014310363	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGTTGGTTTTCTT	NA	False	NA	-23	True	AATAAA	-35	NA	22084676	22064615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUST00000161304.2	chr14	-	3823	8	FSM	ENSMUSG00000033083.17	ENSMUST00000161304.2	3823	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	3.22616851161035	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGAGCTTTTTTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	101700659	101679803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310
ENSMUST00000161308.8	chr1	-	813	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	85	1943	0	-78	multi-exon	FALSE	canonical	3	2337	junction_3	156.5907617539	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGCCAGCATTTGGATT	NA	False	NA	NA	False	AATAAA	-19	NA	180641112	180630339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
ENSMUST00000161309.8	chr6	-	457	4	FSM	ENSMUSG00000030042.16	ENSMUST00000161309.8	457	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	435.143909784134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAATCATACCCCTGCT	6109	False	NA	NA	False	NA	NA	NA	82682346	82595972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_82596120_82628417_82628460_82629063_82629149_82682163
ENSMUST00000161318.8	chr9	+	4489	26	FSM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	153.155429547894	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290869	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUST00000161326.8	chr16	+	4487	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAAGTATTTGTTTTTGT	NA	False	NA	4	True	ATTAAA	-16	NA	43960215	43983729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUST00000161326.8-0	chr16	+	3618	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	-23	892	0	0	multi-exon	FALSE	canonical	3	958	junction_1	274.815733719887	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCTGTCTGTAACTGT	NA	False	NA	19	True	AATAAA	-19	NA	43960192	43982837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUST00000161368.2	chr19	-	1160	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTGCCTGGTTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	5779681	5778114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5778858_5779264
ENSMUST00000161369.3	chr5	+	6164	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_4	35.264476932649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGTTTAGAAATGCTATG	NA	False	NA	NA	False	AATAAA	-18	NA	67418147	67448804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUST00000161374.8	chr5	-	4217	14	FSM	ENSMUSG00000029673.20	ENSMUST00000161374.8	4217	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	11.7397821618248	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGACACTCTGTTTGGA	NA	False	NA	NA	False	NA	NA	NA	131567526	131468135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131566498
ENSMUST00000161380.8	chr1	+	600	8	FSM	ENSMUSG00000053332.14	ENSMUST00000161380.8	600	8	0	0	0	0	multi-exon	FALSE	canonical	3	1206	junction_6	1658.79128603096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTCTTTGAAATGTGC	NA	False	NA	NA	False	NA	NA	NA	160862732	160865116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864735_160864857_160864886_160865074
ENSMUST00000161401.2	chr6	-	530	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	66	2527	66	147	multi-exon	FALSE	canonical	3	4909	junction_2	335	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTACGGTCTTTATTAA	NA	False	NA	NA	False	AGTAAA	-17	NA	50543452	50542069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_50542366_50542471_50542649_50543395
ENSMUST00000161410.8	chr12	-	2764	10	FSM	ENSMUSG00000021266.17	ENSMUST00000161410.8	2764	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	620.186073232944	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	False	NA	-31	True	AATAAA	-19	NA	108859124	108825955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859085
ENSMUST00000161445.8	chr14	-	3298	14	FSM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	49.8631262652749	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTCAACTTTTGTTATA	NA	False	NA	NA	False	CATAAA	-10	NA	20596615	20549935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ENSMUST00000161448.8	chr5	-	4861	7	FSM	ENSMUSG00000046658.17	ENSMUST00000161448.8	6891	7	0	2030	0	-1438	multi-exon	TRUE	canonical	0	0	junction_2	2.98607881119482	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCTTGGGGACTGGA	NA	False	NA	NA	False	AATAAA	-8	NA	143255777	143237481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143241321_143248547_143248662_143249050_143249178_143249805_143249898_143250047_143250437_143250760_143250889_143255605
ENSMUST00000161459.8	chr14	-	2995	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_12	10.965249034588	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTGATTATTAT	NA	False	NA	NA	False	TATAAA	-13	NA	59678333	59639457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ENSMUST00000161460.8	chr3	+	3777	9	FSM	ENSMUSG00000027804.14	ENSMUST00000161460.8	3777	9	0	0	0	0	multi-exon	FALSE	canonical	3	2177	junction_4	229.457478359281	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATCTCATTTTAAAAT	NA	False	NA	16	True	AATAAA	-15	NA	79498648	79510583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_79498865_79500916_79501058_79502508_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUST00000161461.8	chr1	+	793	11	FSM	ENSMUSG00000053332.14	ENSMUST00000161461.8	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1206	junction_6	1709.07735342787	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862747	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000161470.8	chr7	-	707	4	FSM	ENSMUSG00000040331.17	ENSMUST00000161470.8	707	4	0	0	0	0	multi-exon	FALSE	canonical	3	1499	junction_2	15.369522511198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAGACCGACTGCCAAT	NA	False	NA	NA	False	NA	NA	NA	130141237	130137278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_130137303_130138712_130138808_130139891_130139983_130140740
ENSMUST00000161490.8	chr5	-	4968	19	FSM	ENSMUSG00000029334.15	ENSMUST00000161490.8	4968	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	5.01386965216377	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTCAATGGTGTC	NA	False	NA	2	True	ATTAAA	-29	NA	99185210	99077631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272_99091396_99095229_99095394_99114370_99114513_99115585_99115676_99117795_99117933_99119710_99119865_99120966_99121066_99124294_99124364_99127624_99127720_99128944_99129023_99136145_99136210_99140175_99140282_99142390_99142505_99145204_99145372_99172252_99172727_99184781
ENSMUST00000161527.8	chr15	+	1743	9	FSM	ENSMUSG00000022553.17	ENSMUST00000161527.8	1743	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	277.590075471008	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAACCTGGGAGTTTG	NA	False	NA	23	True	AATAAA	-15	NA	76235493	76238572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76235860_76236195_76236242_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUST00000161538.8	chr6	+	4253	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTTGTGAGAAGGAAGGT	NA	False	NA	NA	False	AAAAAG	-5	NA	38528399	38583302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ENSMUST00000161538.8-0	chr6	+	1764	8	FSM	ENSMUSG00000029823.17	ENSMUST00000161538.8	4253	8	0	2489	0	-1162	multi-exon	FALSE	canonical	3	61	junction_7	31.7644391078567	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTTTTCCACATTTTG	NA	False	NA	8	True	NA	NA	NA	38528399	38580813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211
ENSMUST00000161542.8	chr18	-	2736	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	94.1501296524877	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCACTGTAAGTTGTG	NA	False	NA	-12	True	AATAAA	-23	NA	70663209	70641750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
ENSMUST00000161543.2	chr2	+	2960	7	FSM	ENSMUSG00000027405.17	ENSMUST00000161543.2	2960	7	0	0	0	0	multi-exon	FALSE	canonical	3	1993	junction_1	225.275695291101	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAAAGCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	130116365	130120903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075
ENSMUST00000161548.8	chr19	-	784	7	FSM	ENSMUSG00000024792.10	ENSMUST00000161548.8	784	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	215.340815143499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCCCAGCTGCTCAGGT	6690	False	NA	NA	False	NA	NA	NA	6134723	6131894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134675
ENSMUST00000161567.8	chr1	-	3630	24	FSM	ENSMUSG00000026335.17	ENSMUST00000161567.8	3630	24	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	5.01867966278542	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTAGCAGTCAGAGTGTA	5780	False	NA	-12	True	AATAAA	-12	NA	97904980	97748824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581
ENSMUST00000161568.8	chr13	+	3702	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	611	4376	0	3220	multi-exon	FALSE	canonical	3	1033	junction_1	130.199846390078	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCGTCTAGTTTTGATA	NA	False	NA	NA	False	AATAAA	-14	NA	90237852	90256000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ENSMUST00000161600.8	chr1	-	8685	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGTTGATTGTAT	NA	False	NA	1	True	TATAAA	-30	NA	58625482	58561964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ENSMUST00000161600.8-0	chr1	-	4259	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	0	4426	0	-211	multi-exon	FALSE	canonical	3	17	junction_1	5.70486235990445	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTTTCATCTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	58625482	58566390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ENSMUST00000161608.8	chr1	-	2495	7	FSM	ENSMUSG00000054770.17	ENSMUST00000161608.8	2495	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	29.1228241914978	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTTTCTGTGACTAC	NA	False	NA	-4	True	AATAAA	-20	NA	58008683	57994411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004509_58004700_58006655_58006883_58008565
ENSMUST00000161609.8	chr1	+	4076	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	0	6930	0	231	multi-exon	FALSE	canonical	3	12	junction_16	4.23610650691766	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAACTTTATTTTAATAA	NA	False	NA	NA	False	ATTAAA	-18	NA	160733987	160795618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ENSMUST00000161630.8	chr16	+	3856	6	FSM	ENSMUSG00000022529.12	ENSMUST00000161630.8	3856	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	76.2532622252976	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATAAATCTTTATTGG	NA	False	NA	12	True	AATAAA	-21	NA	3562095	3568654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3563377_3563640_3563822_3564285_3564360_3564634_3564759_3566012_3566130_3566575
ENSMUST00000161639.8	chr13	+	3157	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	31.6045487232455	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274485	97312959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUST00000161663.8	chr9	+	2620	22	FSM	ENSMUSG00000032295.16	ENSMUST00000161663.8	2620	22	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	64.4669754968016	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCAGTTTGGGCACCTC	NA	False	NA	NA	False	NA	NA	NA	57038051	57047994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043486_57043610_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918
ENSMUST00000161696.2	chr9	+	1977	4	FSM	ENSMUSG00000032295.16	ENSMUST00000161696.2	1977	4	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	25.4950975679639	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCGGGAAGGGAAGCATGA	NA	False	NA	NA	False	NA	NA	NA	57038053	57042415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805
ENSMUST00000161705.3	chr8	+	2110	2	FSM	ENSMUSG00000004567.17	ENSMUST00000161705.3	2110	2	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGGTGGTCTAATTTGTAA	NA	False	NA	12	True	AATAAA	-13	NA	3563022	3565232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3564914_3565013
ENSMUST00000161706.2	chr17	-	183	2	FSM	ENSMUSG00000090101.2	ENSMUST00000161706.2	183	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATCGTATGTTGGTGTTT	4301	False	NA	-8	True	AATAAA	-15	NA	24938939	24938504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24938582_24938833
ENSMUST00000161707.2	chr19	-	1572	3	FSM	ENSMUSG00000024640.10	ENSMUST00000161707.2	1572	3	0	0	0	0	multi-exon	FALSE	canonical	3	2829	junction_2	366	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	15887076	15882493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_15883516_15884293_15884432_15886664
ENSMUST00000161712.8	chr12	-	2154	8	FSM	ENSMUSG00000079036.11	ENSMUST00000161712.8	2154	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	99.4164606745846	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTGTATCTGTCTTT	NA	False	NA	-56	True	AATAAA	-19	NA	87490606	87474849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
ENSMUST00000161732.8	chr15	+	2026	15	FSM	ENSMUSG00000022550.19	ENSMUST00000161732.8	2026	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	36.3298381892508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAATCGTTTTCTTTG	3103	False	NA	NA	False	NA	NA	NA	76460558	76480008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477635_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUST00000161739.8	chr6	-	3893	15	FSM	ENSMUSG00000040669.15	ENSMUST00000161739.8	3893	15	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_10	176.752392241987	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCTTACTGCA	9076	False	NA	-19	True	ATTAAA	-34	NA	122316617	122294696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ENSMUST00000161741.8	chr5	-	413	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	534	8	0	0	multi-exon	FALSE	canonical	3	4948	junction_3	568.415341101909	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTGCCTGGTGTAGT	8631	False	NA	-10	True	AATAAA	-17	NA	145128338	145120515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
ENSMUST00000161744.2	chr1	-	1447	3	FSM	ENSMUSG00000026478.15	ENSMUST00000161744.2	1447	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	466.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTGTGGCCTAAATG	NA	False	NA	-1	True	AATAAA	-24	NA	153104890	153094667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153095897_153104480_153104596_153104787
ENSMUST00000161760.2	chr1	-	3317	2	FSM	ENSMUSG00000026694.20	ENSMUST00000161760.2	3317	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTATTTATG	NA	False	NA	NA	False	NA	NA	NA	162376097	162371204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_162374097_162375672
ENSMUST00000161764.8	chr1	-	2867	21	FSM	ENSMUSG00000042349.14	ENSMUST00000161764.8	2867	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	6.85036495378166	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCTATGGTACCT	NA	False	NA	NA	False	AATAAA	-19	NA	131204688	131182338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131197537_131197625_131197754_131197847_131197922_131197988_131198623_131198821_131199499_131199680_131199844_131199956_131201107_131201269_131201377_131201560_131202886_131203017_131203515_131203585_131204204_131204316_131204630
ENSMUST00000161769.8	chr1	-	2844	17	FSM	ENSMUSG00000039630.11	ENSMUST00000161769.8	2844	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2477.87245481759	4047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCGATATGGCTAAGACC	NA	False	NA	NA	False	ATTAAA	-15	NA	178165293	178150638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_178150761_178151184_178151279_178151530_178151582_178152807_178152879_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ENSMUST00000161785.8	chr15	+	3540	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGCTCTGTTGGGTT	NA	False	NA	17	True	AGTAAA	-17	NA	75488527	75497149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75488670_75489892_75491541_75495399
ENSMUST00000161788.8	chr8	+	2962	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	13.29995822884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGTCGCAGACTCTC	NA	False	NA	6	True	AATAAA	-16	NA	31677359	31727822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
ENSMUST00000161796.9	chr9	-	862	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	6.24179461373089	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	83028658	82992000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUST00000161804.9	chr5	-	5393	15	FSM	ENSMUSG00000029673.20	ENSMUST00000161804.9	5393	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	19.9085921354657	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGTAA	NA	False	NA	15	True	NA	NA	NA	131645444	131466625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131499251_131499297_131501096_131501318_131503760_131504012_131505390_131505863_131562659_131562712_131644795
ENSMUST00000161807.8	chr14	-	842	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	114	6	0	0	multi-exon	FALSE	canonical	3	915	junction_9	61.4455856835949	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATATTACCTGTGTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	55828430	55824903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ENSMUST00000161809.2	chr5	-	769	4	FSM	ENSMUSG00000066861.15	ENSMUST00000161809.2	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	120.052766176655	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCAGGCCCATGACCCAG	NA	False	NA	NA	False	NA	NA	NA	121017666	121015006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162
ENSMUST00000161816.8	chr6	+	1603	11	FSM	ENSMUSG00000030166.15	ENSMUST00000161816.8	1603	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	12.9769025580067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAAAGAAAGGGTGGGGG	NA	False	NA	NA	False	NA	NA	NA	119879688	119898276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767
ENSMUST00000161839.2	chr16	+	1041	2	FSM	ENSMUSG00000022528.9	ENSMUST00000161839.2	653	2	89	-477	89	0	multi-exon	FALSE	canonical	3	25	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	False	NA	16	True	AATAAA	-17	NA	29885244	29886614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_29885361_29885689
ENSMUST00000161854.8	chr10	+	4258	18	FSM	ENSMUSG00000034902.18	ENSMUST00000161854.8	4258	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	55.0099078839251	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	5016	False	NA	NA	False	AATAAA	-15	NA	81128837	81155806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81128987_81140517_81140550_81141019_81141126_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153159_81153238_81153599
ENSMUST00000161859.8	chr5	-	3452	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	27.6348964173923	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGCAAACTTATTTC	2181	False	NA	NA	False	ATTAAA	-28	NA	146158365	146146001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
ENSMUST00000161861.8	chr16	-	8342	17	FSM	ENSMUSG00000022788.17	ENSMUST00000161861.8	8342	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	5.00585594578989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGAGCCTTGGCTGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	16378083	16234780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16377900
ENSMUST00000161877.8	chr6	-	3530	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161877.8	3530	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_11	292.50572239383	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACACCTACCCTAATCCA	9122	False	NA	-11	True	AATAAA	-14	NA	122316571	122295261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
ENSMUST00000161892.2	chr15	+	597	3	FSM	ENSMUSG00000022452.17	ENSMUST00000161892.2	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	632.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCTTGGTTGCACTTTA	NA	False	NA	62	True	AATAAA	-44	NA	82230214	82233292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82230422_82232100_82232242_82233043
ENSMUST00000161892.2-0	chr15	+	502	3	FSM	ENSMUSG00000022452.17	ENSMUST00000161892.2	597	3	63	32	0	0	multi-exon	FALSE	canonical	3	88	junction_1	632.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGAGGTCGTCCCCAT	NA	False	NA	30	True	AATAAA	-12	NA	82230277	82233260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82230422_82232100_82232242_82233043
ENSMUST00000161915.8	chr5	-	1216	6	FSM	ENSMUSG00000001844.11	ENSMUST00000161915.8	1216	6	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	19.2935222289762	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGGATATTTGTTTTCT	8171	False	NA	-21	True	AATACA	-18	NA	143312109	143302251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853
ENSMUST00000161929.8	chr13	+	696	5	FSM	ENSMUSG00000021666.17	ENSMUST00000161929.8	696	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	100.14614321081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATACACAAGATCATTGGG	NA	False	NA	NA	False	NA	NA	NA	97274515	97282803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97274909_97278434_97278519_97279515_97279601_97282154_97282213_97282727
ENSMUST00000161938.8	chr5	-	5866	25	FSM	ENSMUSG00000029406.16	ENSMUST00000161938.8	5866	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	9.53356643071673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAAAAAAACTGTCTG	4705	False	NA	NA	False	AAGAAA	-19	NA	124325245	124257809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124325001
ENSMUST00000161976.8	chr15	+	2338	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	2	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAATACAATTGGGCC	NA	False	NA	NA	False	AATAAA	-7	NA	61857239	61862199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_61857801_61859355_61860128_61861194
ENSMUST00000161977.8	chr13	-	3111	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_14	18.8014599954148	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGTTGCTGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	63579538	63459352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ENSMUST00000161977.8-0	chr13	-	2516	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	-1	596	0	0	multi-exon	FALSE	canonical	3	59	junction_14	18.8014599954148	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579539	63459948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ENSMUST00000161984.8	chr5	-	2583	10	FSM	ENSMUSG00000029510.16	ENSMUST00000161984.8	2583	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.20267947790745	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1744	False	NA	-2	True	AATAAA	-18	NA	138278244	138271918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274447_138274601_138274845_138275009_138275668_138275750_138276476_138276800_138277100_138277260_138277910
ENSMUST00000161989.2	chr14	-	2322	12	FSM	ENSMUSG00000021816.12	ENSMUST00000161989.2	2322	12	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	32.8535442821749	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTAATCTGGCTCGTT	NA	False	NA	-7	True	AATAAA	-19	NA	20596508	20557738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ENSMUST00000161991.8	chr14	-	6483	19	FSM	ENSMUSG00000033083.17	ENSMUST00000161991.8	6483	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	4.49553962758753	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGCTGTTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	101846469	101679795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
ENSMUST00000162004.8	chr19	-	2847	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATTTGTGTGTGTACA	NA	False	NA	88	True	NA	NA	NA	42768417	42743543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ENSMUST00000162004.8-0	chr19	-	2743	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	13	91	0	0	multi-exon	FALSE	canonical	3	80	junction_19	17.2102848848348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTGTCCCTGGCCT	NA	False	NA	-3	True	AATAAA	-19	NA	42768404	42743634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ENSMUST00000162007.8	chr1	-	2964	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	11.3207773584679	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGATTCATATAGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	16589464	16414514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
ENSMUST00000162022.8	chr19	-	7514	11	FSM	ENSMUSG00000052942.14	ENSMUST00000162022.8	7514	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5.0950956811428	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTATTCTATTAATCCA	NA	False	NA	NA	False	ATTAAA	-19	NA	28657477	28236250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_28240516_28241261_28241445_28261051_28261228_28276177_28276347_28294653_28294814_28331605_28331717_28335190_28335353_28508272_28509387_28517600_28517809_28643152_28643637_28656995
ENSMUST00000162023.2	chr10	-	2519	15	FSM	ENSMUSG00000020079.16	ENSMUST00000162023.2	2519	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	90.2367916729566	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACTTATTATAGCCTT	NA	False	NA	49	True	AGTAAA	-16	NA	62285462	62265033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279157_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ENSMUST00000162031.8	chr1	-	3381	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTTCTCTGTTTGATGG	NA	False	NA	NA	False	TATAAA	-17	NA	38036396	38024269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ENSMUST00000162031.8-0	chr1	-	1102	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	72	2207	0	0	multi-exon	FALSE	canonical	3	675	junction_1	112.632976965008	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACATGTCTGTTTTT	NA	False	NA	-5	True	NA	NA	NA	38036324	38026476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ENSMUST00000162047.8	chr8	+	654	3	FSM	ENSMUSG00000004626.15	ENSMUST00000162047.8	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_2	17	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCACTGAGGGCAAGTGG	NA	False	NA	NA	False	NA	NA	NA	3690763	3692022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3691207_3691734_3691821_3691897
ENSMUST00000162049.2	chr15	+	3532	24	FSM	ENSMUSG00000023032.13	ENSMUST00000162049.2	3532	24	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.00556433744809	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTCTCTGATACTC	4515	False	NA	11	True	ATTAAA	-19	NA	100679134	100713816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ENSMUST00000162053.8	chr19	-	2291	9	FSM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	1098.17038181696	3878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGCCTGTGAATTAT	NA	False	NA	-14	True	ATTAAA	-20	NA	15901986	15882490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15901667
ENSMUST00000162054.9	chr15	-	4388	16	FSM	ENSMUSG00000022335.18	ENSMUST00000162054.9	4388	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	6.94742158406028	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTCACCCCCCCCCC	NA	False	NA	NA	False	AATAAA	-3	NA	68130705	67955612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084462_68084694_68096615_68096793_68130516
ENSMUST00000162057.8	chr16	+	2085	6	FSM	ENSMUSG00000022744.13	ENSMUST00000162057.8	1540	6	98	-643	0	0	multi-exon	FALSE	canonical	3	12	junction_1	183.824916700648	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGAGATCACAACATG	NA	False	NA	24	True	AATAAA	-31	NA	58548385	58554614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_58548448_58549535_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUST00000162073.8	chr9	+	2530	14	FSM	ENSMUSG00000032059.14	ENSMUST00000162073.8	2530	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	42.7472273227982	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTTTCAGTCTGCT	NA	False	NA	38	True	TTTAAA	-45	NA	50686604	50754842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ENSMUST00000162075.8	chr13	-	2619	10	FSM	ENSMUSG00000038991.18	ENSMUST00000162075.8	2619	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	335.794947718962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTCTGGTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	38712800	38684248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712527
ENSMUST00000162088.8	chr19	+	2269	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162088.8	2269	3	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	79	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTTTTTGTTTGTTT	NA	False	NA	22	True	NA	NA	NA	4928695	4935425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4928765_4930148_4930427_4933503
ENSMUST00000162096.8	chr5	-	1489	7	FSM	ENSMUSG00000066861.15	ENSMUST00000162096.8	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	130.842674825745	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025676	121014784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019886_121020133_121023835_121024125_121025442
ENSMUST00000162099.8	chr6	-	2580	15	FSM	ENSMUSG00000003500.14	ENSMUST00000162099.8	2580	15	0	0	0	0	multi-exon	FALSE	canonical	1	42	junction_14	63.7043554080817	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGATCCTGTTTCTG	7	False	NA	-2	True	AATAAA	-18	NA	29216341	29200436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
ENSMUST00000162114.8	chr3	+	1411	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	165.248718267008	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTGTTTGGGCTTTG	NA	False	NA	NA	False	ATTAAA	-43	NA	89960148	89968301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
ENSMUST00000162117.3	chr17	-	1591	7	FSM	ENSMUSG00000037577.14	ENSMUST00000162117.3	1591	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	2.21108319357027	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCGGTCTGATGTTTAA	994	False	NA	NA	False	CATAAA	-26	NA	32408523	32403633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32404096_32404189_32404327_32404419_32404524_32407149_32407279_32407384_32407543_32407759_32407846_32408008
ENSMUST00000162134.2	chr19	+	2314	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162134.2	2314	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	74.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATGTCTTTTTGTTTGT	NA	False	NA	20	True	NA	NA	NA	4928717	4935423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4928834_4930148_4930427_4933503
ENSMUST00000162160.8	chr15	-	850	8	FSM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	229.028917165408	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGACTGGTTTTAGTCTT	NA	False	NA	2	True	AATAAA	-30	NA	93296182	93283977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_93284165_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ENSMUST00000162163.8	chr1	+	1614	7	FSM	ENSMUSG00000053332.14	ENSMUST00000162163.8	1614	7	0	0	0	0	multi-exon	FALSE	canonical	3	3085	junction_3	1089.57866474462	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862753	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862765_160863321_160863375_160863552_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000162164.2	chr14	-	609	3	FSM	ENSMUSG00000041625.16	ENSMUST00000162164.2	609	3	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_2	16.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGACAGTGTGCAGTGC	NA	False	NA	NA	False	NA	NA	NA	123150497	123128897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_123129229_123137887_123137945_123150276
ENSMUST00000162175.9	chr14	-	4389	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	257	8053	0	1612	multi-exon	FALSE	canonical	3	137	junction_14	16.0953043938104	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTTTTTTATTTTTTA	NA	False	NA	-4	True	AATAAA	-14	NA	49303853	49249599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ENSMUST00000162177.8	chr14	-	1219	11	FSM	ENSMUSG00000006289.15	ENSMUST00000162177.8	1219	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	239.350287236093	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTAGGTTGTGTTTTTC	NA	False	NA	-5	True	AATAAA	-20	NA	51162145	51153142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51161992
ENSMUST00000162183.8	chr15	-	2130	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.1691718917785	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTGTCTTGTTGTTGGTC	9244	False	NA	0	True	AATAAA	-17	NA	88703521	88689446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
ENSMUST00000162189.2	chr19	+	2161	8	FSM	ENSMUSG00000024935.12	ENSMUST00000162189.2	2161	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	6.3342283649701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGCAGCTTCCCTTGTACT	NA	False	NA	4	True	AATGAA	-15	NA	28873192	28890038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053
ENSMUST00000162207.2	chr16	+	2452	2	FSM	ENSMUSG00000022529.12	ENSMUST00000162207.2	2452	2	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATATGTATAAATCTT	1922	False	NA	6	True	AATAAA	-15	NA	3565750	3568648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3566130_3566575
ENSMUST00000162209.2	chr9	-	1589	1	FSM	ENSMUSG00000089810.2	ENSMUST00000162209.2	1589	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGGCATATACTTGG	9967	False	NA	-1	True	AATAAA	-15	NA	45769655	45768066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45768100_45769700
ENSMUST00000162244.8	chr5	+	1387	8	FSM	ENSMUSG00000029625.17	ENSMUST00000162244.8	1387	8	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_6	148.975001327096	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGGGCGCCAGGCTCCCC	NA	False	NA	NA	False	NA	NA	NA	145104063	145118563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115642_145115739_145117945
ENSMUST00000162245.8	chr5	+	4123	34	FSM	ENSMUSG00000036928.15	ENSMUST00000162245.8	4123	34	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	28.1737362148663	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGACTTGAGATTGTCA	NA	False	NA	20	True	AATAAA	-20	NA	138278805	138310655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_138278847_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
ENSMUST00000162247.8	chr12	-	1883	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162247.8	1883	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	71.1983145867934	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490598	87474846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUST00000162284.8	chr5	-	435	3	FSM	ENSMUSG00000001844.11	ENSMUST00000162284.8	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	12.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGAGGCTGAGGCTTCGG	5336	False	NA	NA	False	NA	NA	NA	143314944	143311747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143311979_143314145_143314326_143314920
ENSMUST00000162301.8	chr18	+	3828	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATTGTCAAGAAATGT	-12	True	NA	5	True	ATTAAA	-17	NA	3383231	3436377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUST00000162301.8-0	chr18	+	2811	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	25	992	0	0	multi-exon	FALSE	canonical	3	782	junction_1	80.8420682565705	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	13	True	NA	72	True	ATTAAA	-28	NA	3383256	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUST00000162320.2	chr13	-	1241	6	FSM	ENSMUSG00000021597.17	ENSMUST00000162320.2	1241	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	13.9283882771841	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	GAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-45	NA	77283579	77253684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ENSMUST00000162326.2	chr13	-	1853	17	FSM	ENSMUSG00000039233.13	ENSMUST00000162326.2	1853	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	33.754571449657	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGATTTCTCTGCCCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	14214223	14172537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178117_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUST00000162335.8	chr10	-	1434	3	FSM	ENSMUSG00000038876.13	ENSMUST00000162335.8	1434	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	113	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGCTGAAATTTATTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	29233709	29222653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29223880_29230287_29230444_29233657
ENSMUST00000162336.2	chr1	-	3092	4	FSM	ENSMUSG00000001305.6	ENSMUST00000162336.2	3092	4	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_3	20.6774165590278	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATCTCTGCTTCCCTG	NA	False	NA	-16	True	ATTAAA	-12	NA	186481522	186453288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_186453744_186468312_186468512_186469784_186472061_186481360
ENSMUST00000162349.8	chr5	-	3362	18	FSM	ENSMUSG00000029207.17	ENSMUST00000162349.8	3362	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	40.4423636189393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCC	NA	False	NA	NA	False	ATTAAA	-8	NA	66776014	66459230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66480944_66480951_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ENSMUST00000162355.8	chr9	-	4727	39	FSM	ENSMUSG00000041528.16	ENSMUST00000162355.8	4727	39	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_38	17.254651305945	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGCCCGCTCTTCTT	NA	False	NA	-2	True	ATTAAA	-16	NA	107956500	107928870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ENSMUST00000162361.2	chr3	-	472	3	FSM	ENSMUSG00000027860.16	ENSMUST00000162361.2	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	87.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCATGGAGAGTATCC	NA	False	NA	NA	False	NA	NA	NA	102073256	102070678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_102070850_102072670_102072804_102073088
ENSMUST00000162363.8	chr9	+	780	4	FSM	ENSMUSG00000032059.14	ENSMUST00000162363.8	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	89.1154058261284	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATCGAAACTCTCCA	NA	False	NA	NA	False	NA	NA	NA	50686845	50694628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50687284_50687843_50687980_50690269_50690405_50694557
ENSMUST00000162364.8	chr1	+	2840	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGTATTCTTGCTTT	NA	False	NA	13	True	CATAAA	-13	NA	55170389	55194058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUST00000162364.8-0	chr1	+	1990	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	56	794	0	167	multi-exon	FALSE	canonical	3	402	junction_7	40.5985824624356	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55170445	55193264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUST00000162372.8	chr5	+	3044	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	10	2657	0	0	multi-exon	FALSE	canonical	3	203	junction_11	79.5528159088737	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGGTAGTTTTCAATC	396	False	NA	15	True	AATAAA	-18	NA	67464307	67513129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUST00000162376.2	chr13	+	1397	3	FSM	ENSMUSG00000021578.18	ENSMUST00000162376.2	762	3	-14	-621	0	621	multi-exon	FALSE	canonical	1	3	junction_1	206.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTAATGGTGTTGCTTT	4392	False	NA	23	True	NA	NA	NA	74498469	74505788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_74498528_74500980_74501106_74504574
ENSMUST00000162394.2	chr7	-	716	3	FSM	ENSMUSG00000005610.18	ENSMUST00000162394.2	716	3	0	0	0	0	multi-exon	FALSE	canonical	3	5111	junction_2	225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTTTAGGGTTTTATGG	NA	False	NA	NA	False	AGTAAA	-37	NA	110682034	110679625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_110680172_110680713_110680841_110681991
ENSMUST00000162405.8	chr10	-	1135	3	FSM	ENSMUSG00000071324.12	ENSMUST00000162405.8	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAATCCTGAGTCTCATC	NA	False	NA	NA	False	AATAAA	-33	NA	41894376	41875803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_41876495_41887763_41888020_41894188
ENSMUST00000162409.8	chr3	-	5198	14	FSM	ENSMUSG00000039735.17	ENSMUST00000162409.8	5198	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	9.36820759854666	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	False	NA	-5	True	AATAAA	-18	NA	122413364	122332373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ENSMUST00000162410.8	chr1	-	2261	3	FSM	ENSMUSG00000054770.17	ENSMUST00000162410.8	2261	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	11	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAGAAGAGATAAAAGA	NA	False	NA	NA	False	ATTAAA	-16	NA	58009238	58002724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_58004700_58006655_58006883_58009179
ENSMUST00000162413.9	chr16	-	1687	10	FSM	ENSMUSG00000022858.17	ENSMUST00000162413.9	1687	10	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	660.884723143114	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAAATATC	NA	False	NA	-20	True	AATAAA	-14	NA	22084676	22065211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
ENSMUST00000162443.8	chr6	-	2906	12	FSM	ENSMUSG00000038521.18	ENSMUST00000162443.8	2906	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.09797369803078	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTGGTCTGCTTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	124519318	124507306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291_124518448_124519226
ENSMUST00000162445.9	chr16	-	3447	32	FSM	ENSMUSG00000022710.18	ENSMUST00000162445.9	3447	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_31	257.735592800152	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTCCCGTGTCCAAGG	NA	False	NA	NA	False	ATTAAA	-13	NA	8539520	8508643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8539478
ENSMUST00000162460.8	chr17	-	3706	9	FSM	ENSMUSG00000023994.14	ENSMUST00000162460.8	3706	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	12.5492778676703	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGATTTTTGGTGTT	NA	False	NA	-8	True	AATAAA	-22	NA	48716934	48693916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_48696371_48698276_48698379_48698903_48699078_48699367_48699535_48700207_48700314_48700448_48700581_48702677_48702825_48707465_48707609_48716653
ENSMUST00000162466.8	chr8	-	1735	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_15	163.229558869982	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3334	False	NA	NA	False	AATAAA	-19	NA	105261268	105237659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUST00000162476.8	chr13	+	3188	6	FSM	ENSMUSG00000021481.12	ENSMUST00000162476.8	1112	6	-6	-2070	0	0	multi-exon	FALSE	canonical	2	4	junction_3	25.663982543635	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCGATGTGTGCGCT	19	False	NA	11	True	NA	NA	NA	55253139	55282638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55270142_55270329_55278346_55278441_55280119
ENSMUST00000162505.8	chr17	+	1802	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	40	10952	0	0	multi-exon	FALSE	canonical	3	150	junction_1	66.6565978791022	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720189	15737689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ENSMUST00000162512.8	chr16	-	3415	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	44566726	44557130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUST00000162512.8-0	chr16	-	1037	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	4	2374	0	0	multi-exon	FALSE	canonical	3	89	junction_4	12.4739729036101	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAAGGGTTACAAATAAT	NA	False	NA	-72	True	NA	NA	NA	44566722	44559504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUST00000162527.8	chr10	+	1735	6	FSM	ENSMUSG00000040034.16	ENSMUST00000162527.8	1735	6	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_2	90.1798203591025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAACAACAAAA	NA	False	NA	NA	False	NA	NA	NA	7543303	7551844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769
ENSMUST00000162535.2	chr13	-	2630	4	FSM	ENSMUSG00000035834.12	ENSMUST00000162535.2	2630	4	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	16.0485374896143	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAATTTAAAAAAATAAA	NA	False	NA	-43	True	NA	NA	NA	81835404	81821998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244
ENSMUST00000162538.9	chr8	-	1505	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	97	2757	0	0	multi-exon	FALSE	canonical	3	1341	junction_8	171.134997881789	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564889	95549188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ENSMUST00000162543.8	chr5	+	664	4	FSM	ENSMUSG00000037720.17	ENSMUST00000162543.8	664	4	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	54.4691553898983	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATCTCTCAATGTTCTT	NA	False	NA	NA	False	TATAAA	-29	NA	67417993	67421955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612
ENSMUST00000162554.8	chr6	+	4195	18	FSM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	3.0576920984393	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTCATGTTTATGCA	3485	False	NA	NA	False	ATTAAA	-23	NA	38358403	38404582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ENSMUST00000162558.8	chr1	+	502	12	FSM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	0	0	0	0	multi-exon	FALSE	canonical	3	1206	junction_7	1656.43137771865	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGAAGTGTGCATTTT	NA	False	NA	20	True	ATTAAA	-16	NA	160862732	160866107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUST00000162583.8	chr9	+	4299	20	FSM	ENSMUSG00000032280.17	ENSMUST00000162583.8	4299	20	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	39.4816132387409	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGTTTGATTGTTGTGT	NA	False	NA	35	True	AATGAA	-35	NA	61280500	61325768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUST00000162594.8	chr5	+	867	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	67.372397908936	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTCTTTTAAGAGTG	NA	False	NA	20	True	AATAAA	-21	NA	145077171	145084888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUST00000162602.8	chr8	+	3083	20	FSM	ENSMUSG00000025812.19	ENSMUST00000162602.8	3083	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_15	35.6917396186892	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATTCAGATACAAAG	NA	False	NA	NA	False	NA	NA	NA	127791094	128153234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002
ENSMUST00000162606.8	chr10	-	2757	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATCCTTGGTAGTCA	NA	False	NA	0	True	AATAAA	-20	NA	7539372	7505136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUST00000162606.8-0	chr10	-	1135	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	305	1317	0	-1309	multi-exon	FALSE	canonical	3	339	junction_1	146.985630284746	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAGTTTTGAAGAGT	NA	False	NA	-14	True	ATTAAA	-21	NA	7539067	7506453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUST00000162610.8	chr10	-	1554	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	15.3179633110933	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTGTCTGCACTGTTCA	NA	False	NA	0	True	AATAAA	-17	NA	13744724	13522797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ENSMUST00000162626.8	chr12	+	960	11	FSM	ENSMUSG00000060073.10	ENSMUST00000162626.8	1394	11	18	416	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1218.25789141708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_71021542_71025506_71025614_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUST00000162645.8	chr14	+	7482	24	FSM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	25.4924281726925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGGTGAGTTAGCTGT	321	False	NA	NA	False	AATAAA	-16	NA	25459647	25667167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ENSMUST00000162654.8	chr1	-	4015	15	FSM	ENSMUSG00000026709.11	ENSMUST00000162654.8	4015	15	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_4	42.9292845198677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGCTGTCTCACAGATC	NA	False	NA	NA	False	NA	NA	NA	160898212	160868759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160869501_160871182_160871259_160872528_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649
ENSMUST00000162655.9	chr9	-	2081	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	0	2099	0	0	multi-exon	FALSE	canonical	3	75	junction_12	13.3260396717604	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCACATGAATGTTTATTA	NA	False	NA	-10	True	AATAAA	-17	NA	102503733	102463885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ENSMUST00000162671.8	chr16	-	2714	17	FSM	ENSMUSG00000022788.17	ENSMUST00000162671.8	2714	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	4.09219913371771	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGCAGCTGCTAGTGT	NA	False	NA	NA	False	AAAAAG	-13	NA	16417842	16240426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302462_16308286_16308471_16321960_16322081_16417641
ENSMUST00000162689.2	chr9	-	2999	2	FSM	ENSMUSG00000046111.19	ENSMUST00000162689.2	2999	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATGGAG	NA	False	NA	NA	False	NA	NA	NA	15262730	15255957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_15258333_15262106
ENSMUST00000162698.2	chr1	-	489	1	FSM	ENSMUSG00000089782.2	ENSMUST00000162698.2	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGCAACTTCTGAAGA	8543	False	NA	NA	False	NA	NA	NA	97877114	97876625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_97876600_97877100
ENSMUST00000162708.7	chr19	+	2266	11	FSM	ENSMUSG00000036908.18	ENSMUST00000162708.7	2266	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	6.90579466824782	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGTAGGTTGTGTTCT	5185	False	NA	NA	False	AATAAA	-20	NA	3985185	3999340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3985353_3985761_3985904_3986268_3986423_3991519_3991682_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
ENSMUST00000162720.8	chr19	+	2523	3	FSM	ENSMUSG00000006463.14	ENSMUST00000162720.8	2523	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGTCTTTTTGTTTGTT	NA	False	NA	21	True	NA	NA	NA	4928731	4935424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4929056_4930148_4930427_4933503
ENSMUST00000162726.5	chr19	+	1281	1	FSM	ENSMUSG00000075227.7	ENSMUST00000162726.5	1281	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGCAGTGCCTTTTCCG	2533	False	NA	11	True	AATAAA	-22	NA	6111221	6112502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6111200_6112500
ENSMUST00000162730.10	chr12	+	3605	11	FSM	ENSMUSG00000004151.18	ENSMUST00000162730.10	3605	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	6.25219961293624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTGCTGTTCGTTT	1356	False	NA	NA	False	NA	NA	NA	38831111	38917298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ENSMUST00000162737.8	chr8	+	701	7	FSM	ENSMUSG00000004626.15	ENSMUST00000162737.8	701	7	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_6	23.5613855468835	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAGGTCAGAGGTCA	4589	False	NA	NA	False	NA	NA	NA	3681156	3684735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474
ENSMUST00000162739.8	chr6	-	2471	14	FSM	ENSMUSG00000003500.14	ENSMUST00000162739.8	2471	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_13	73.8672245580225	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATCCTGTTTCTGTCCT	-12	True	NA	2	True	AATAAA	-22	NA	29216330	29200432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29216070
ENSMUST00000162744.2	chr15	+	374	2	FSM	ENSMUSG00000023032.13	ENSMUST00000162744.2	374	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGACATCCAGCTACCCA	NA	False	NA	NA	False	NA	NA	NA	100712234	100713681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100712427_100713499
ENSMUST00000162767.2	chr3	+	1545	6	FSM	ENSMUSG00000050150.17	ENSMUST00000162767.2	1545	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	32.6521055982612	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCAAAAATCAATTGATC	NA	False	NA	NA	False	AAAAAG	-3	NA	135054090	135080462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034
ENSMUST00000162787.9	chr4	-	2408	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTTACAATTTTGACT	NA	False	NA	2	True	ATTAAA	-29	NA	109059469	108919275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000162787.9-0	chr4	-	2799	23	FSM	ENSMUSG00000028559.18	ENSMUST00000162787.9	2408	23	38	-429	0	0	multi-exon	FALSE	canonical	1	25	junction_17	111.643220473462	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCTTTCATTGTTTT	NA	False	NA	-1	True	CATAAA	-25	NA	109059431	108918846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000162789.9	chr12	-	1059	5	FSM	ENSMUSG00000021124.14	ENSMUST00000162789.9	1059	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	311.173183291877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTTTTACAGTTGTGAG	NA	False	NA	84	True	AATACA	-36	NA	79219222	79202943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79218993
ENSMUST00000162811.2	chr11	-	2788	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	11	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTAGCTCAGTTGAC	3044	False	NA	-9	True	AATAAA	-16	NA	20199429	20188386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20190699_20191885_20192239_20199306
ENSMUST00000162812.8	chr5	-	5348	25	FSM	ENSMUSG00000029406.16	ENSMUST00000162812.8	6952	25	0	1604	0	0	multi-exon	FALSE	canonical	3	6	junction_8	7.71857427825171	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCGGCTGCTTCCTTT	8218	False	NA	NA	False	TTTAAA	-6	NA	124387823	124258356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ENSMUST00000162819.9	chr1	-	4399	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	0	2646	0	1223	multi-exon	FALSE	canonical	3	48	junction_11	31.9711408328487	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTAAGTGGCAACTCC	NA	False	NA	-2	True	AATAAA	-21	NA	181039543	181003438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ENSMUST00000162827.8	chr9	+	3472	6	FSM	ENSMUSG00000032425.16	ENSMUST00000162827.8	3472	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.88557558782486	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTTTGAGTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	88430072	88453114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ENSMUST00000162834.3	chr15	-	1982	9	FSM	ENSMUSG00000018042.19	ENSMUST00000162834.3	1982	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	535.950499113491	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCAGCGTTTCTCTGGG	NA	False	NA	0	True	AGTAAA	-18	NA	83054378	83037694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83054337
ENSMUST00000162875.8	chr1	-	4634	10	FSM	ENSMUSG00000026090.17	ENSMUST00000162875.8	4634	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.83278861866266	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTCTGTGCGTCAAT	NA	False	NA	-1	True	AATAAA	-15	NA	37759166	37650757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_37651478_37652417_37652563_37653561_37653750_37662841_37665150_37667297_37667508_37670401_37670564_37670896_37671033_37676941_37677111_37683641_37683722_37758650
ENSMUST00000162903.7	chr6	+	1198	7	FSM	ENSMUSG00000030232.19	ENSMUST00000162903.7	1198	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	116.765315436087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACATAAACATATGTGGT	NA	False	NA	NA	False	NA	NA	NA	140583477	140600144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140599483
ENSMUST00000162907.8	chr8	+	4682	16	FSM	ENSMUSG00000025812.19	ENSMUST00000162907.8	4682	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_15	26.9315180906437	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTTGTATGTATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	127790819	128129058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128126878
ENSMUST00000162936.8	chr12	+	1986	11	FSM	ENSMUSG00000020571.14	ENSMUST00000162936.8	1986	11	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_6	177.381199680237	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTAGAGTTTTGTGT	NA	False	NA	NA	False	AATAAA	-14	NA	17316545	17331811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911
ENSMUST00000162955.8	chr5	-	4889	6	FSM	ENSMUSG00000029207.17	ENSMUST00000162955.8	4889	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	7.88923316932641	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTTAGTGTTTGTGTCT	NA	False	NA	23	True	ATTAAA	-38	NA	66471071	66456045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657
ENSMUST00000162957.8	chr14	-	1465	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	295.870647412007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168269	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
ENSMUST00000162961.8	chr12	-	3857	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTGCCTTCTT	NA	False	NA	-2	True	ATTAAA	-15	NA	87490609	87472938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUST00000162961.8-0	chr12	-	1949	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	0	1908	0	0	multi-exon	FALSE	canonical	3	174	junction_2	59.8431282604778	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490609	87474846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUST00000162963.8	chr1	-	6452	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAATTCTCGTTGCGTTC	NA	False	NA	-7	True	AATAAA	-15	NA	181039002	181000796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ENSMUST00000162963.8-1	chr1	-	4349	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162963.8	6452	14	-541	2644	0	1221	multi-exon	FALSE	canonical	3	114	junction_11	18.0616957141628	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAATTAAGTGGCAACT	NA	False	NA	-4	True	AATAAA	-19	NA	181039543	181003440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
ENSMUST00000162965.2	chr10	+	1952	2	FSM	ENSMUSG00000038039.14	ENSMUST00000162965.2	1952	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGCATTTTCATGAC	NA	False	NA	2	True	ATTAAA	-12	NA	58134231	58141411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_58134688_58139915
ENSMUST00000162973.8	chr9	+	4114	20	FSM	ENSMUSG00000032280.17	ENSMUST00000162973.8	4114	20	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	44.235268765659	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGATTGTTGTGTTTTA	NA	False	NA	39	True	AAAAAG	-4	NA	61280698	61325772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUST00000162973.8-0	chr9	+	5155	20	FSM	ENSMUSG00000032280.17	ENSMUST00000162973.8	4114	20	-1034	-7	0	0	multi-exon	FALSE	canonical	3	64	junction_12	44.235268765659	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTGTTTTAATTGCCT	NA	False	NA	46	True	AAAAAG	-11	NA	61279664	61325779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUST00000162978.2	chr17	-	446	2	FSM	ENSMUSG00000057388.10	ENSMUST00000162978.2	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAACTAGTTAGTTGCC	NA	False	NA	NA	False	NA	NA	NA	13134956	13134388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13134712_13134833
ENSMUST00000162986.2	chr12	-	1319	3	FSM	ENSMUSG00000079036.11	ENSMUST00000162986.2	1319	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAACAACC	NA	False	NA	NA	False	NA	NA	NA	87490603	87480015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87480980_87485166_87485330_87490411
ENSMUST00000163038.8	chr8	-	2754	18	FSM	ENSMUSG00000019470.13	ENSMUST00000163038.8	4409	18	-11	1666	0	0	multi-exon	FALSE	canonical	3	374	junction_11	45.4063544476041	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1011	False	NA	-4	True	AATACA	-16	NA	3671316	3660086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ENSMUST00000163048.8	chr10	+	5023	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTCTTGTAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	111808568	111824337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ENSMUST00000163048.8-0	chr10	+	2560	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	129	2334	0	-796	multi-exon	FALSE	canonical	3	311	junction_6	38.1443004172444	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGTATTTCTTTTAA	NA	False	NA	-17	True	ATTAAA	-21	NA	111808697	111822003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ENSMUST00000163058.2	chr1	-	5379	34	FSM	ENSMUSG00000026024.15	ENSMUST00000163058.2	5379	34	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_33	24.7049067000806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTTGTAATTTCTGA	NA	False	NA	NA	False	AATACA	-18	NA	59276252	59203216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276006
ENSMUST00000163075.8	chr10	+	4208	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_16	27.8766815636295	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCCTCTCCGGTGACTT	4975	False	NA	NA	False	AATAAA	-15	NA	81128796	81155806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ENSMUST00000163085.8	chr10	-	1132	7	FSM	ENSMUSG00000019795.18	ENSMUST00000163085.8	1132	7	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_3	37.7491721763537	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCATTCTTGCTTTATT	NA	False	NA	1	True	AATAAA	-21	NA	7539025	7513493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUST00000163095.9	chr12	-	4083	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_8	127.060085416792	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGCCTAACGTGCTGG	8777	False	NA	NA	False	ATTAAA	-14	NA	101049956	101006173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ENSMUST00000163100.8	chr14	-	3841	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTCCAGATTGTTCAAA	NA	False	NA	-34	True	ATTAAA	-16	NA	67953059	67913803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ENSMUST00000163100.8-0	chr14	-	3233	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	235	373	0	-373	multi-exon	FALSE	canonical	0	0	junction_2	110.056131318597	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGACTTTAAGTAGAAAT	NA	False	NA	-25	True	AATAAA	-15	NA	67952824	67914176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ENSMUST00000163107.9	chr17	-	4316	11	FSM	ENSMUSG00000024050.19	ENSMUST00000163107.9	4316	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	93.3230946765054	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGGCAAACAGCCAGT	NA	False	NA	-16	True	ATTAAA	-18	NA	32608413	32573034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32586797_32587122_32600057_32600131_32606546_32606792_32608233
ENSMUST00000163119.8	chr1	-	4709	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCTTTATGTCAGTGAA	NA	False	NA	NA	False	AATAAA	-21	NA	80318197	80242639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ENSMUST00000163119.8-0	chr1	-	4257	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	-236	688	-236	-688	multi-exon	FALSE	canonical	3	483	junction_14	55.1621448297854	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATGCGTCTTGGATTA	NA	False	NA	-8	True	ATTAAA	-19	NA	80318433	80243327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ENSMUST00000163139.8	chr6	-	9034	32	FSM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_30	20.9222334925891	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCGTGGCTCTGAGTCTT	8990	False	NA	-2	True	AATAAA	-35	NA	89339602	89293295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ENSMUST00000163140.2	chr8	-	807	4	FSM	ENSMUSG00000031879.15	ENSMUST00000163140.2	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	52.8288641642889	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCCTTAGCGTCTCTCA	NA	False	NA	-3	True	AATAAA	-25	NA	105368331	105366472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942
ENSMUST00000163192.11	chr9	-	2309	11	FSM	ENSMUSG00000062762.18	ENSMUST00000163192.11	2309	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	155.462664328127	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708569	36690454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
ENSMUST00000163205.8	chr18	+	3204	9	FSM	ENSMUSG00000024576.15	ENSMUST00000163205.8	3204	9	0	0	0	0	multi-exon	FALSE	canonical	3	1742	junction_4	121.033053336682	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACTGCTTTTAAAGGTA	482	False	NA	NA	False	AATAAA	-13	NA	61688398	61715333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409
ENSMUST00000163230.8	chr16	-	2347	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.98498591107085	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGAATTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-7	NA	45229416	45202497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
ENSMUST00000163238.9	chr10	+	2461	15	FSM	ENSMUSG00000020212.15	ENSMUST00000163238.9	2461	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	33.0859270903593	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCACACACTCTTGAC	NA	False	NA	NA	False	NA	NA	NA	117977763	118004286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ENSMUST00000163242.3	chr15	+	1937	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_3	91.244743989915	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGACCCTTGATTGGA	NA	False	NA	25	True	AATAAA	-33	NA	85220445	85347413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUST00000163246.8	chr10	-	1395	8	FSM	ENSMUSG00000061904.13	ENSMUST00000163246.8	1395	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1829.96665521087	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959819	90952652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957969_90958194_90959419_90959569_90959777
ENSMUST00000163257.9	chr13	+	3987	11	FSM	ENSMUSG00000064138.15	ENSMUST00000163257.9	1436	11	29	-2580	0	0	multi-exon	FALSE	canonical	2	7	junction_2	38.9	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAACTGTGTCTTCTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	77856837	78314354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_77856973_77890881_77891006_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ENSMUST00000163265.9	chr19	-	5024	11	FSM	ENSMUSG00000025154.16	ENSMUST00000163265.9	1812	11	0	-3212	0	0	multi-exon	FALSE	canonical	3	6	junction_1	113.148398132718	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4527	False	NA	NA	False	ATTAAA	-17	NA	41790486	41755026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41758636_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ENSMUST00000163272.2	chr11	+	4303	15	FSM	ENSMUSG00000017548.16	ENSMUST00000163272.2	4303	15	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	508.713027037397	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	False	NA	36	True	TATAAA	-21	NA	79883931	79924948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ENSMUST00000163279.6	chr3	-	3961	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATT	NA	False	NA	NA	False	AAAACA	-20	NA	144426096	144394604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ENSMUST00000163279.6-0	chr3	-	1738	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	0	2223	0	279	multi-exon	FALSE	canonical	3	282	junction_5	25.8444868395563	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGTGACTCATTTATTA	NA	False	NA	-3	True	AATAAA	-15	NA	144426096	144396827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ENSMUST00000163299.8	chr11	-	1923	15	FSM	ENSMUSG00000034164.18	ENSMUST00000163299.8	1923	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	6.0995148686312	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGCTTGGTCTCTATGT	7879	False	NA	NA	False	AATAAA	-18	NA	5102240	5056265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_5056970_5060689_5060775_5066879_5066925_5078869_5078915_5079008_5079072_5079427_5079481_5079621_5079721_5080631_5080779_5081481_5081572_5081919_5082041_5084348_5084411_5085353_5085432_5093826_5093925_5094294_5094409_5102121
ENSMUST00000163300.8	chr11	-	1991	5	FSM	ENSMUSG00000048076.15	ENSMUST00000163300.8	1991	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	968.523876835259	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGCTTGTGTGTCAGTGC	1955	False	NA	-2	True	AATAAA	-17	NA	59118988	59102237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118701
ENSMUST00000163301.8	chr11	-	2090	6	FSM	ENSMUSG00000048728.16	ENSMUST00000163301.8	2090	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3.42928563989645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTTGTTTCTTTTTTT	NA	False	NA	-1	True	ATTAAA	-26	NA	50778328	50763546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50765115_50768869_50768933_50774010_50774104_50774511_50774639_50777195_50777326_50778219
ENSMUST00000163311.9	chr7	-	1288	6	FSM	ENSMUSG00000061479.16	ENSMUST00000163311.9	1288	6	0	0	0	0	multi-exon	FALSE	canonical	3	2141	junction_5	100.882902416614	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895185	26886431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868
ENSMUST00000163320.8	chr7	+	6096	20	FSM	ENSMUSG00000005442.14	ENSMUST00000163320.8	6096	20	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_13	27.4875947844843	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGGGCTGCTGGCTTGT	3251	False	NA	12	True	ATTAAA	-14	NA	24981603	24993570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985322_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990479_24990768_24990874_24991195_24991488_24991740_24991838_24991994_24992074_24992207_24992380_24992513_24992592
ENSMUST00000163324.8	chr14	+	3132	4	FSM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	28.4526897771644	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47710017	47769419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47710175_47738250_47738328_47763661_47763772_47766631
ENSMUST00000163326.8	chr11	+	4606	22	FSM	ENSMUSG00000020788.16	ENSMUST00000163326.8	4606	22	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_21	23.72461048905	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTAGTCTTTTCTGAG	NA	False	NA	22	True	AATAAA	-22	NA	72851994	72883869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_72852298_72861421_72861440_72861673_72861757_72862970_72863076_72863228_72863368_72863647_72863729_72863819_72863906_72866011_72866477_72867963_72868053_72868170_72868274_72869041_72869174_72869505_72869632_72870952_72871172_72871264_72871601_72872553_72872775_72873449_72873653_72874285_72874372_72878799_72878934_72879288_72879407_72879795_72879914_72880300_72880387_72882514
ENSMUST00000163329.2	chr9	+	1364	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	59.3140792729686	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818268	57837251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUST00000163333.9	chr15	+	4601	10	FSM	ENSMUSG00000022255.17	ENSMUST00000163333.9	1593	10	-614	-2394	0	-2087	multi-exon	FALSE	canonical	3	69	junction_9	216.816757131084	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	27	False	NA	25	True	AATAAA	-26	NA	34082839	34143683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34140837
ENSMUST00000163336.8	chr14	+	4065	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	0	0	0	0	multi-exon	TRUE	canonical	3	533	junction_6	51.0289194210886	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGCTATCACTTT	NA	False	NA	NA	False	NA	NA	NA	31881821	31901812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUST00000163338.2	chrX	+	2025	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	4.85626742811116	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTTGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	147665571	147707135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
ENSMUST00000163354.8	chr3	-	4894	17	FSM	ENSMUSG00000060671.13	ENSMUST00000163354.8	4894	17	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_14	19.3728829488541	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	9564	False	NA	-7	True	TATAAA	-35	NA	89860672	89846795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981
ENSMUST00000163370.8	chr16	-	7255	28	FSM	ENSMUSG00000002489.17	ENSMUST00000163370.8	7255	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	15.0582772812045	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	89771587	89583998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89705434_89705604_89752823_89752996_89771471
ENSMUST00000163377.10	chr10	+	1158	3	FSM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	26	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTCAGGCTTTGGCTC	NA	False	NA	NA	False	AATAAA	-15	NA	128583757	128602432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128583868_128601015_128601110_128601478
ENSMUST00000163394.3	chr17	-	1808	19	FSM	ENSMUSG00000073460.6	ENSMUST00000163394.3	2092	19	284	0	0	0	multi-exon	TRUE	canonical	3	109	junction_10	13.5984067694222	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTACATGGCCAGTGC	2974	False	NA	-8	True	GATAAA	-20	NA	13128833	13107615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13107857_13108962_13109062_13109165_13109342_13109607_13109708_13111022_13111066_13111206_13111261_13111645_13111711_13113246_13113303_13114398_13114485_13116147_13116218_13118419_13118564_13118727_13118805_13122094_13122196_13124392_13124482_13124648_13124773_13125384_13125425_13127939_13128014_13128348_13128407_13128722
ENSMUST00000163398.8	chr19	-	3378	30	FSM	ENSMUSG00000025159.9	ENSMUST00000163398.8	3378	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	66.8449143044629	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGGCACACTCACGTG	NA	False	NA	-14	True	AATAAA	-10	NA	41969556	41932649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951898_41952301_41952377_41952756_41952843_41954652_41954754_41969437
ENSMUST00000163399.8	chrX	+	1991	7	FSM	ENSMUSG00000046774.18	ENSMUST00000163399.8	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	79.7050116924205	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGCTGTACTTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	100838261	100842244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841763_100841947_100841990_100842072
ENSMUST00000163401.9	chr9	+	7880	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_7	49.9699909945959	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGATGTTAAGATAATTTA	677	False	NA	NA	False	ATTAAA	-21	NA	72439521	72530111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ENSMUST00000163402.8	chr12	-	4655	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATAATGGTACATGTCT	NA	False	NA	NA	False	NA	NA	NA	81579685	81544714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ENSMUST00000163402.8-0	chr12	-	3420	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	34	1201	3	0	multi-exon	FALSE	canonical	3	147	junction_1	30.6920185064456	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTTTTTGTTTCCTT	NA	False	NA	-6	True	AATAGA	-12	NA	81579651	81545915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ENSMUST00000163419.9	chr16	-	4175	20	FSM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_9	44.050650776067	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTAATGTGTGCTATTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	90081196	90025838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ENSMUST00000163421.8	chr17	+	2890	10	FSM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_8	47.4952889151735	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTCAAGAGGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	26357923	26414268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ENSMUST00000163421.8-0	chr17	+	3669	10	FSM	ENSMUSG00000024182.18	ENSMUST00020183805.1	2890	10	-262	-517	0	0	multi-exon	FALSE	canonical	3	227	junction_8	47.4952889151735	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATATGTGATATACTAT	NA	False	NA	11	True	AATAAA	-19	NA	26357661	26414785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
ENSMUST00000163433.8	chr12	-	2658	7	FSM	ENSMUSG00000054302.16	ENSMUST00000163433.8	2658	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	149.586559853781	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	54742669	54718439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54718648_54718863_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ENSMUST00000163441.8	chr9	-	1896	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	161.744242555956	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	7972	False	NA	0	True	AATAAA	-28	NA	106563022	106535944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
ENSMUST00000163446.9	chr18	-	4064	23	FSM	ENSMUSG00000024613.17	ENSMUST00000163446.9	4064	23	0	0	0	0	multi-exon	FALSE	canonical	2	104	junction_4	297.096601286295	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGCTTTCCAGTACGC	NA	False	NA	4	True	AAAAAG	-21	NA	60982031	60949068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954704_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUST00000163452.7	chr6	+	2959	2	FSM	ENSMUSG00000052751.17	ENSMUST00000163452.7	2959	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTGGTGGTGTTCTTT	NA	False	NA	20	True	AATAAA	-18	NA	48570816	48576015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48570987_48573226
ENSMUST00000163475.3	chr7	+	4004	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	46.5403051128804	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248684	41277957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ENSMUST00000163476.10	chr16	+	4532	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCATCTCCCTGTTTTG	NA	False	NA	14	True	NA	NA	NA	17437220	17462691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUST00000163476.10-0	chr16	+	3203	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	3	1326	0	154	multi-exon	FALSE	canonical	3	223	junction_5	25.2948660188897	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGGCTGAATCTTTA	NA	False	NA	6	True	AATAAA	-19	NA	17437223	17461365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUST00000163483.2	chr11	+	2657	6	FSM	ENSMUSG00000020149.18	ENSMUST00000163483.2	2657	6	0	0	0	0	multi-exon	FALSE	canonical	3	1848	junction_1	130.08397287906	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151601	20176856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUST00000163492.8	chr17	-	2216	12	FSM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	0	0	0	0	multi-exon	FALSE	canonical	3	1453	junction_5	300.974423009307	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45903501	45896125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104
ENSMUST00000163504.8	chr7	-	1913	3	FSM	ENSMUSG00000051314.12	ENSMUST00000163504.8	1913	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCAAATGTTCACGGGT	5897	False	NA	NA	False	AATAAA	-14	NA	30520564	30517781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30519540_30520101_30520164_30520471
ENSMUST00000163506.3	chr15	-	1771	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_13	210.299476515005	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAAGTAGCTTCTTTTAT	NA	False	NA	-8	True	AATAAA	-12	NA	99149826	99140706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
ENSMUST00000163528.8	chr1	-	3413	14	FSM	ENSMUSG00000046836.14	ENSMUST00000163528.8	3413	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	29.2690033348083	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCGCTGGATTTATGT	NA	False	NA	NA	False	AATAAA	-15	NA	183078800	183057917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
ENSMUST00000163530.8	chr3	-	2157	16	FSM	ENSMUSG00000028107.15	ENSMUST00000163530.8	2157	16	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_13	151.691997884602	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662183	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95660318_95660443_95661630_95661828_95662069
ENSMUST00000163545.8	chr14	-	3270	22	FSM	ENSMUSG00000022119.16	ENSMUST00000163545.8	3270	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	64.8996085016964	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATTACATACTTCTA	NA	False	NA	NA	False	AGTAAA	-37	NA	105414296	105352400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ENSMUST00000163558.3	chr13	-	678	4	FSM	ENSMUSG00000068184.8	ENSMUST00000163558.3	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	39.4151691047439	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCGTATTTCCTGACT	NA	False	NA	-1	True	AATAAA	-15	NA	108295157	108189122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUST00000163586.9	chr9	-	3570	3	FSM	ENSMUSG00000051705.14	ENSMUST00000163586.9	3570	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATTGAGACAGTCTCTC	6429	False	NA	NA	False	NA	NA	NA	59657921	59641735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_59645152_59647222_59647316_59657860
ENSMUST00000163590.9	chr18	-	3145	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	49888668	49829211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ENSMUST00000163590.9-0	chr18	-	2444	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	34	667	0	661	multi-exon	FALSE	canonical	3	168	junction_3	20.6145579627602	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTATGATTGCTCT	NA	False	NA	-1	True	AATAAA	-15	NA	49888634	49829878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ENSMUST00000163595.3	chr13	+	3575	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	71.2031522398334	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGGGAGTGTTTCT	NA	False	NA	13	True	AATAAA	-43	NA	35925295	36058041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ENSMUST00000163600.8	chr13	+	1055	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	292.63455772516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337595	85361029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUST00000163623.3	chr13	-	4626	7	FSM	ENSMUSG00000021365.16	ENSMUST00000163623.3	4626	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.46249406456535	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGTGAAATTATGAT	NA	False	NA	NA	False	ATTAAA	-18	NA	41512723	41463395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_41465647_41467841_41467932_41469249_41470492_41471337_41471440_41471919_41472022_41492052_41492497_41512328
ENSMUST00000163643.3	chr8	-	3129	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	82.9540606689901	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175304	73094842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUST00000163654.8	chr7	+	781	7	FSM	ENSMUSG00000078765.12	ENSMUST00000163654.8	781	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	203.636454387606	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGGTTTCCTTCC	NA	False	NA	33	True	AATAAA	-21	NA	30262749	30264787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ENSMUST00000163666.3	chr11	-	1774	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	0	0	0	0	multi-exon	FALSE	canonical	3	9657	junction_10	1402.57834362292	7315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGCTTCTTGTTTCTT	NA	False	NA	64	True	AATAAA	-19	NA	69563143	69557761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUST00000163691.3	chr15	+	1902	3	FSM	ENSMUSG00000042622.15	ENSMUST00000163691.3	1902	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAGAAGTGTATGTCTT	2809	False	NA	18	True	AATAAA	-19	NA	79232263	79243272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79232447_79241166_79241234_79241620
ENSMUST00000163694.4	chr9	+	2041	11	FSM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	0	0	0	0	multi-exon	FALSE	canonical	3	941	junction_8	6644.99062151332	27381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGATGACGACTTCTGGC	1869	False	NA	NA	False	GGGGCT	-26	NA	59563855	59586472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59582479_59585326_59585509_59586010
ENSMUST00000163717.2	chr17	+	1920	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	446.592917963328	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	913	False	NA	NA	False	AATAAA	-18	NA	24633648	24644869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000163748.8	chr3	-	2656	9	FSM	ENSMUSG00000037174.19	ENSMUST00000163748.8	2656	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	82.3403758796376	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATTTTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	51233408	51163105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368
ENSMUST00000163754.9	chr15	+	6058	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	9.02397355744309	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGTCTGTCTTATTTT	NA	False	NA	24	True	TATAAA	-17	NA	81284338	81341683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ENSMUST00000163763.2	chr17	+	868	3	FSM	ENSMUSG00000044279.16	ENSMUST00000163763.2	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCATCTAGCTGGTG	1594	False	NA	NA	False	NA	NA	NA	57369298	57372427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57369767_57370636_57370699_57372089
ENSMUST00000163764.8	chr3	+	5584	11	FSM	ENSMUSG00000025764.15	ENSMUST00000163764.8	5584	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	237.242260147723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41517803	41571293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_41518002_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ENSMUST00000163765.3	chr15	+	7832	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	0	0	0	0	multi-exon	TRUE	canonical	3	205	junction_4	36.1069753346922	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGGTGTTTGTATACTA	NA	False	NA	NA	False	ATTAAA	-13	NA	8138756	8190731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUST00000163796.8	chr13	+	1300	6	FSM	ENSMUSG00000025875.15	ENSMUST00000163796.8	712	6	0	-588	0	0	multi-exon	FALSE	canonical	2	9	junction_1	159.188441791482	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54937275	54944588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_54937495_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ENSMUST00000163805.2	chr12	+	1170	9	FSM	ENSMUSG00000021111.16	ENSMUST00000163805.2	1170	9	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_8	273.366512213914	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTATATTTTTTTATT	4491	False	NA	NA	False	AATAAA	-14	NA	105765943	105777671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295
ENSMUST00000163812.9	chr7	+	3026	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_13	239.092317096712	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944197	79966007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
ENSMUST00000163837.2	chr8	-	1272	13	FSM	ENSMUSG00000031708.18	ENSMUST00000163837.2	1272	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	1132.45025644985	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321058	84298328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300337_84300552_84301106_84301158_84320968
ENSMUST00000163858.8	chr19	-	2131	15	FSM	ENSMUSG00000005986.17	ENSMUST00000163858.8	2131	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	5.64240504518043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGCTTGCTGTCCTGCGTG	858	False	NA	-7	True	AATAAA	-15	NA	4333165	4320209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332063_4332196_4332333_4332908
ENSMUST00000163869.2	chr8	+	1467	7	FSM	ENSMUSG00000091490.4	ENSMUST00000163869.2	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	46.4351399504968	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43636155	43646918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUST00000163884.8	chr16	+	1645	9	FSM	ENSMUSG00000002845.15	ENSMUST00000163884.8	1645	9	0	0	0	0	multi-exon	FALSE	canonical	1	310	junction_8	142.984210229661	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATCTATTTTTTCTTGCG	7070	False	NA	0	True	GATAAA	-12	NA	38379059	38411552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUST00000163889.3	chr14	-	1886	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_16	115.082697847027	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959720	55953781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ENSMUST00000163946.2	chr4	-	762	3	FSM	ENSMUSG00000078570.11	ENSMUST00000163946.2	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	68	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGACCTTTCTTTTCTG	7655	False	NA	-2	True	ATTAAA	-21	NA	124744523	124743277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124743756_124744024_124744227_124744441
ENSMUST00000163949.9	chr6	+	2561	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_7	40.2939611577855	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTCCGGCTTCCCCTCC	-3	True	NA	13	True	AATAAA	-19	NA	30738048	30748461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUST00000163968.8	chr7	-	3801	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_16	13.8562655051785	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCCTCCCTCACCCT	8442	False	NA	-1	True	AATAAA	-19	NA	15955957	15931145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ENSMUST00000163972.2	chr9	-	2138	4	FSM	ENSMUSG00000032199.14	ENSMUST00000163972.2	2138	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	1098.58130736368	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCCGAGCTCATGGCG	3447	False	NA	-33	True	AATAAA	-15	NA	71392240	71385752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392016
ENSMUST00000163979.7	chr9	+	3320	11	FSM	ENSMUSG00000032479.16	ENSMUST00000163979.7	3320	11	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_5	21.1435569382259	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTTGTATTGAAATGGC	NA	False	NA	20	True	AATAAA	-12	NA	109891658	109912238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ENSMUST00000164016.8	chr7	+	1985	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	0	640	0	0	multi-exon	FALSE	canonical	3	56	junction_3	8.3132048573339	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATGTTACCCTTGC	9945	False	NA	28	True	AATAAA	-29	NA	141035110	141040016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
ENSMUST00000164056.9	chr7	+	4427	5	FSM	ENSMUSG00000048897.16	ENSMUST00000164056.9	5871	5	20	1424	0	0	multi-exon	FALSE	canonical	3	72	junction_4	112.192635676322	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79674581	79742497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ENSMUST00000164077.9	chr10	+	2922	13	FSM	ENSMUSG00000020212.15	ENSMUST00000164077.9	2922	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_12	29.3295452099452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977828	118004902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
ENSMUST00000164079.9	chr9	+	1005	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	106.167791726116	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTGCTTGATTTCAGA	9122	False	NA	NA	False	AATAAA	-17	NA	15217559	15223094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUST00000164083.4	chr10	+	1473	11	FSM	ENSMUSG00000044475.15	ENSMUST00000164083.4	1473	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	64.3808201252516	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGGTCTGTGCACG	NA	False	NA	28	True	AATAAA	-18	NA	59839148	59935810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59839239_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUST00000164088.8	chr10	-	2618	14	FSM	ENSMUSG00000020166.16	ENSMUST00000164088.8	2618	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	135.006640204874	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116385068	116321069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937
ENSMUST00000164096.2	chr1	-	669	4	FSM	ENSMUSG00000090553.9	ENSMUST00000164096.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_2	133.057214093119	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCAACTCTGGCTGTT	NA	False	NA	NA	False	NA	NA	NA	133537987	133533824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133534318_133536634_133536698_133537455_133537483_133537901
ENSMUST00000164099.3	chr9	+	5762	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_9	7.52927619363243	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATAGTAGCCCGTGATTT	NA	False	NA	NA	False	NA	NA	NA	30338403	30378022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ENSMUST00000164107.3	chr10	+	6839	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGGTTTGTGGTGGTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	74896423	75020753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ENSMUST00000164107.3-0	chr10	+	4700	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	0	2139	0	0	multi-exon	FALSE	canonical	3	29	junction_3	6.08751601555753	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGGGGCCACAGCCAT	NA	False	NA	9	True	AATAAA	-18	NA	74896423	75018614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ENSMUST00000164108.8	chr1	-	2442	15	FSM	ENSMUSG00000004364.15	ENSMUST00000164108.8	2442	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_14	163.524322599522	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCCAGGTCTTCAGTG	NA	False	NA	-27	True	AATAAA	-14	NA	80318028	80244539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80317962
ENSMUST00000164114.9	chr2	-	6222	24	FSM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_12	5.82219207901242	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCCTGTGTATACAAT	NA	False	NA	NA	False	AGTAAA	-17	NA	77000961	76840338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ENSMUST00000164120.8	chr2	+	3043	18	FSM	ENSMUSG00000027469.17	ENSMUST00000164120.8	4365	18	31	1291	0	-624	multi-exon	FALSE	canonical	3	159	junction_1	220.211647171926	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2725	False	NA	29	True	AATAAA	-28	NA	152689914	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152690218_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000164122.2	chr3	+	472	2	FSM	ENSMUSG00000001416.14	ENSMUST00000164122.2	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	2565	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACCGTTGTCATGTGTT	865	False	NA	20	True	ATTAAA	-12	NA	88228301	88229071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88228453_88228750
ENSMUST00000164137.8	chr14	+	3013	9	FSM	ENSMUSG00000021911.17	ENSMUST00000164137.8	3013	9	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	64.7586866759974	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCATGTTTCCCCCTT	NA	False	NA	NA	False	TATAAA	-18	NA	31923905	31965052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145
ENSMUST00000164147.8	chr2	-	2543	15	FSM	ENSMUSG00000026970.17	ENSMUST00000164147.8	2543	15	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	64.9034211858871	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTAGTGTAGGTAGCT	NA	False	NA	NA	False	AATAAA	-15	NA	60711782	60582296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ENSMUST00000164181.2	chr10	-	665	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	2189	junction_3	223.361948415571	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTCTTTCTTTCTTTC	8224	False	NA	-4	True	AATAAA	-21	NA	128329744	128326728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000164199.8	chr10	-	1371	6	FSM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	33.0732520324204	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGAGTCTGTGTTTCTC	NA	False	NA	-7	True	AATAAA	-13	NA	128245597	128237263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
ENSMUST00000164202.9	chr19	+	4892	14	FSM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.75805141359757	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCATCAGCTTAACCC	4741	False	NA	NA	False	NA	NA	NA	53665736	53853811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ENSMUST00000164213.5	chr9	+	2571	7	FSM	ENSMUSG00000042787.16	ENSMUST00000164213.5	2571	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	23.8706002345051	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACGCCTGACTGCATATT	NA	False	NA	NA	False	AAAAAG	-3	NA	119274025	119293304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119274217_119274352_119274388_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ENSMUST00000164233.8	chr4	+	1560	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	8	4054	0	-805	multi-exon	FALSE	canonical	3	76	junction_1	940.162278213182	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAGCTCTGACTTTGC	-27	True	NA	1	True	AATAAA	-7	NA	40722929	40733095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUST00000164242.9	chr17	+	2656	18	FSM	ENSMUSG00000040312.15	ENSMUST00000164242.9	2656	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.5503507751598	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTGGAGATGTTTGAG	4432	False	NA	11	True	AATAAA	-13	NA	35827996	35841893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ENSMUST00000164243.2	chr12	+	2317	15	FSM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_10	278.282643353546	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGGTTGGTTCATTGA	NA	False	NA	NA	False	ATTAAA	-15	NA	55286110	55309805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
ENSMUST00000164248.2	chr9	+	1269	1	FSM	ENSMUSG00000092125.2	ENSMUST00000164248.2	1269	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTCTAAAATATTCAGT	NA	False	NA	NA	False	NA	NA	NA	107069991	107071260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107070000_107071300
ENSMUST00000164259.9	chr10	-	2627	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	48.7011398265807	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCAGGCTCTGTGGG	NA	False	NA	-4	True	AATAAA	-14	NA	126957000	126931520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUST00000164260.8	chr13	+	3789	33	FSM	ENSMUSG00000037851.14	ENSMUST00000164260.8	3789	33	0	0	0	0	multi-exon	FALSE	canonical	1	598	junction_16	240.046406646194	3770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTATCAGTATGCCTTCA	NA	False	NA	NA	False	NA	NA	NA	49840868	49887217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ENSMUST00000164273.9	chr9	-	2075	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	0	3657	0	0	multi-exon	FALSE	canonical	3	51	junction_1	8.13557004763649	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACCCTCTGTGCCCTTA	NA	False	NA	-4	True	AATAAA	-21	NA	14956774	14917080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
ENSMUST00000164304.9	chr19	-	3584	17	FSM	ENSMUSG00000056917.14	ENSMUST00000164304.9	3584	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	17.2005632175228	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTATTTGTGTTTGTGTGT	8124	False	NA	-3	True	AAAAAG	-24	NA	5713708	5701215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
ENSMUST00000164309.3	chr8	+	3381	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_1	234.54782794507	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCTGGCTGAAGTGTTTG	NA	False	NA	1	True	NA	NA	NA	75836196	75855067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUST00000164319.2	chr14	-	795	3	FSM	ENSMUSG00000091509.8	ENSMUST00000164319.2	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	0.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAATTAAAAAGTTAAACA	NA	False	NA	NA	False	TATAAA	-40	NA	105351897	105346844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_105347239_105350904_105350964_105351555
ENSMUST00000164342.10	chr17	-	2559	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_7	88.074059745194	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5819	False	NA	-30	True	AATAAA	-18	NA	46593939	46568799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ENSMUST00000164359.8	chr11	-	1281	7	FSM	ENSMUSG00000078812.11	ENSMUST00000164359.8	1281	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	9789.73126404511	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTTGTTTATTTGTT	6572	False	NA	-9	True	AATAAA	-26	NA	69811911	69807539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811849
ENSMUST00000164366.8	chr14	+	1817	6	FSM	ENSMUSG00000091617.9	ENSMUST00000164366.8	1817	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.4	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	14986010	15003411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_14986068_14995798_14995933_14996664_14996828_14997777_14997910_14998585_14998769_15002263
ENSMUST00000164386.8	chr12	-	849	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	28	166	0	-166	multi-exon	FALSE	canonical	3	129	junction_3	83.1899032335054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTCTCAGTGTTCC	NA	False	NA	-46	True	AATAAA	-19	NA	81579651	81405799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUST00000164399.8	chr2	+	983	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	157.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGATCTTTTCTTTTAAC	8590	False	NA	14	True	AATAAA	-24	NA	163500305	163568078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_163500413_163563047_163563222_163567376
ENSMUST00000164403.8	chr8	+	4099	10	FSM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	8.36660026534075	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACAACTTGTGAGTCA	1092	False	NA	NA	False	NA	NA	NA	70686875	70713692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118
ENSMUST00000164408.8	chr14	+	1745	5	FSM	ENSMUSG00000096904.8	ENSMUST00000164408.8	1745	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.4318633651737	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGTGTATGCTTCAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	16057290	16063946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_16057426_16058159_16058323_16059272_16059405_16060080_16060263_16062813
ENSMUST00000164416.8	chr8	-	2860	14	FSM	ENSMUSG00000038542.15	ENSMUST00000164416.8	2860	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	84.1979915149282	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTTGTGTTTTGTCC	NA	False	NA	-6	True	AATAAA	-17	NA	13155459	13127188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145873_13147602_13147669_13148562_13148637_13150324_13150415_13154774
ENSMUST00000164416.8-0	chr8	-	2232	14	FSM	ENSMUSG00000038542.15	ENSMUST00000164416.8	2860	14	628	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	84.1979915149282	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCATTTGTGTTTTGTCC	NA	False	NA	-6	True	AATAAA	-17	NA	13154831	13127188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145873_13147602_13147669_13148562_13148637_13150324_13150415_13154774
ENSMUST00000164420.2	chr5	+	3846	1	FSM	ENSMUSG00000085328.3	ENSMUST00000164420.2	3846	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAACCTAAGATACCCA	NA	False	NA	NA	False	NA	NA	NA	127955594	127959440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_127955600_127959400
ENSMUST00000164431.2	chr12	-	3305	3	FSM	ENSMUSG00000090935.11	ENSMUST00000164431.2	3305	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	56.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTTTTTGTTTCCTT	NA	False	NA	-6	True	AATAGA	-12	NA	81579673	81545915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81548941_81551317_81551414_81579489
ENSMUST00000164458.10	chr16	-	2115	21	FSM	ENSMUSG00000022771.18	ENSMUST00000164458.10	2190	21	-44	119	0	-119	multi-exon	FALSE	canonical	2	8	junction_1	166.780814244325	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTTCTGATCTCTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	16929121	16904538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16904980_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUST00000164470.3	chr8	-	2189	16	FSM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	556.875793053432	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737898	112720074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
ENSMUST00000164472.8	chr6	+	1098	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	15	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTATTTTTCATAATT	NA	False	NA	10	True	AATAAA	-17	NA	117818202	117822916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117818230_117820213_117820354_117821985
ENSMUST00000164474.8	chr11	-	3010	13	FSM	ENSMUSG00000035172.16	ENSMUST00000164474.8	3010	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	14.3843568581366	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTCCTGTGGGAGTG	725	False	NA	0	True	AAGAAA	-19	NA	101062143	101053507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ENSMUST00000164476.8	chr8	-	1247	5	FSM	ENSMUSG00000004994.13	ENSMUST00000164476.8	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	16.6508258053467	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCCTTGTTTCTAAAC	2384	False	NA	-23	True	ATTAAA	-14	NA	84988535	84984930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368
ENSMUST00000164504.2	chr8	+	4521	4	FSM	ENSMUSG00000031631.16	ENSMUST00000164504.2	4521	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3.55902608401044	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTGATTCTGTTTTGT	5156	False	NA	16	True	AATAAA	-17	NA	46622592	46648625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_46623690_46634754_46635024_46644616_46644768_46645621
ENSMUST00000164505.2	chr10	-	1483	7	FSM	ENSMUSG00000061904.13	ENSMUST00000164505.2	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	3785	junction_3	269.875073979713	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATCTATTCCTGATGT	NA	False	NA	-21	True	NA	NA	NA	90959817	90952669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419
ENSMUST00000164506.3	chr11	-	2316	5	FSM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	239.593405585379	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCTTCTGTCTTGTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	102588560	102575513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102577323_102579626_102579688_102581028_102581163_102582936_102583025_102588336
ENSMUST00000164512.8	chr14	-	1990	7	FSM	ENSMUSG00000079391.11	ENSMUST00000164512.8	1990	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.80183061767393	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	18287197	18264877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_18266022_18269520_18269704_18270378_18270511_18271460_18271624_18272355_18272488_18282237_18282389_18287112
ENSMUST00000164532.3	chr15	-	1770	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_11	247.062410558028	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAG	8739	False	NA	-4	True	AATAAA	-22	NA	63869818	63802790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
ENSMUST00000164542.8	chr15	-	730	6	FSM	ENSMUSG00000022370.14	ENSMUST00000164542.8	730	6	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	366.126754007407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420745	55397489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55418715_55418840_55420653
ENSMUST00000164553.8	chr7	+	2798	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	0	0	0	0	multi-exon	FALSE	canonical	3	952	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAACCCTCAATATA	2790	False	NA	-13	True	TTTAAA	-10	NA	3341618	3347838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3341816_3345237
ENSMUST00000164574.2	chr1	-	597	2	FSM	ENSMUSG00000090553.9	ENSMUST00000164574.2	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACATCTCAGAAGA	NA	False	NA	NA	False	NA	NA	NA	133537953	133536598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133536698_133537455
ENSMUST00000164580.3	chr7	+	3001	14	FSM	ENSMUSG00000062031.14	ENSMUST00000164580.3	3001	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	17.6205904299655	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCAGAGTGTGTGATG	NA	False	NA	7	True	ATTAAA	-19	NA	140521460	140527569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526706
ENSMUST00000164589.9	chr7	-	1293	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	23.9565934002925	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATCTTGTTTCTGTTAG	NA	False	NA	-1	True	AATAAA	-21	NA	28855659	28851934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
ENSMUST00000164607.9	chr12	+	2390	20	FSM	ENSMUSG00000071454.14	ENSMUST00000164607.9	2390	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	90.3998198218487	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622432	3831398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
ENSMUST00000164609.8	chrX	-	1811	4	FSM	ENSMUSG00000031422.17	ENSMUST00000164609.8	1811	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1452.09664508485	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135643667	135633701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135643572
ENSMUST00000164614.3	chr15	-	1974	3	FSM	ENSMUSG00000047878.14	ENSMUST00000164614.3	1974	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	34	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTTTTTTTTTT	2266	False	NA	NA	False	NA	NA	NA	83135932	83111080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83112796_83114714_83114859_83135817
ENSMUST00000164643.8	chr11	+	2125	12	FSM	ENSMUSG00000020366.19	ENSMUST00000164643.8	4682	12	20	2537	0	574	multi-exon	FALSE	canonical	3	84	junction_11	90.1850256027862	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAAATTTGTGATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	49737597	49774711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ENSMUST00000164647.8	chr17	-	2754	18	FSM	ENSMUSG00000024043.14	ENSMUST00000164647.8	2754	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	10.076867201425	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGGATTTCCTTT	NA	False	NA	NA	False	AATAAA	-13	NA	68257935	68152104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68257880
ENSMUST00000164655.2	chr14	-	2843	8	FSM	ENSMUSG00000060373.16	ENSMUST00000164655.2	2843	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	1536.09765314579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATAGTTGGTATATACA	8725	False	NA	-34	True	AATAAA	-19	NA	52341485	52310836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321874_52341345
ENSMUST00000164659.8	chr10	+	2602	12	FSM	ENSMUSG00000019970.16	ENSMUST00000164659.8	2602	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	208.20654874943	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTGTCATGTGTTA	NA	False	NA	13	True	AATAAA	-19	NA	21854570	21875797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUST00000164666.6	chr18	-	3606	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGAGCAATGCCTGGGC	NA	False	NA	NA	False	NA	NA	NA	44795333	44562346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
ENSMUST00000164666.6-0	chr18	-	5169	17	FSM	ENSMUSG00000071856.11	ENSMUST00000164666.6	3606	17	0	-1563	0	1563	multi-exon	FALSE	canonical	1	3	junction_7	2.40361056537868	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGTAATTTTCCTTTTTG	NA	False	NA	NA	False	ATTAAA	-18	NA	44795333	44560783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44794764
ENSMUST00000164688.2	chr15	+	1020	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_2	60	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCTACTCACCTGTGCC	3286	False	NA	10	True	AATAAA	-13	NA	102368517	102371211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102368582_102368804_102369155_102370605
ENSMUST00000164726.8	chr7	-	2620	3	FSM	ENSMUSG00000049580.13	ENSMUST00000164726.8	2620	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTTGCTGACAAATC	NA	False	NA	2	True	AATAAA	-30	NA	98010495	97999874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98002338_98008564_98008675_98010448
ENSMUST00000164744.8	chr6	-	2465	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTGCAATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	97182521	97160630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ENSMUST00000164744.8-0	chr6	-	2136	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	-8	337	0	0	multi-exon	FALSE	canonical	3	82	junction_16	154.413292315623	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182529	97160967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ENSMUST00000164745.8	chr7	+	3972	13	FSM	ENSMUSG00000030759.17	ENSMUST00000164745.8	3972	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	119.775136540658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGGCAAAACTGTATT	NA	False	NA	2	True	AATAAA	-16	NA	113113068	113169665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_113113236_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUST00000164750.8	chr11	-	2336	13	FSM	ENSMUSG00000017724.15	ENSMUST00000164750.8	2336	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	6.30420935213573	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCTTTGCTTCCAT	NA	False	NA	-1	True	AATAAA	-24	NA	101676136	101660567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666268_101667918_101667973_101674792_101674841_101675055_101675150_101675342_101675454_101675933
ENSMUST00000164756.4	chr2	+	1691	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTTTGTCTAATAGCT	NA	False	NA	18	True	AATAAA	-18	NA	125515014	125516705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_125515000_125516700
ENSMUST00000164759.8	chr7	-	7090	40	FSM	ENSMUSG00000038371.16	ENSMUST00000164759.8	7090	40	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_32	14.3447273642903	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGAGTGCTGTGATG	NA	False	NA	NA	False	ATTAAA	-20	NA	110214129	109907219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ENSMUST00000164773.2	chr10	+	1949	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTAAAGGTCTCTTTTT	NA	False	NA	18	True	ATTAAA	-18	NA	111342146	111344506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111343510_111343920
ENSMUST00000164773.2-0	chr10	+	1475	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	289	185	289	-185	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTTATTTTCAGAAAC	NA	False	NA	NA	False	NA	NA	NA	111342435	111344321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111343510_111343920
ENSMUST00000164791.8	chr11	+	1252	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	0	0	0	0	multi-exon	FALSE	canonical	3	2502	junction_1	159.654656602932	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTCTGCGGT	NA	False	NA	23	True	AATAAA	-17	NA	9068506	9086167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUST00000164807.2	chr8	+	1175	5	FSM	ENSMUSG00000005161.16	ENSMUST00000164807.2	1175	5	0	0	0	0	multi-exon	FALSE	canonical	3	3496	junction_2	252.757171015977	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATAGGGGT	NA	False	NA	NA	False	NA	NA	NA	85696867	85701289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUST00000164812.8	chr9	-	3614	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	9.14808723176599	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCGTCTATTGTCTCTG	NA	False	NA	-9	True	AATACA	-28	NA	21150109	21141362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
ENSMUST00000164826.8	chr15	-	4726	21	FSM	ENSMUSG00000033170.15	ENSMUST00000164826.8	4726	21	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_20	6.10634915477325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGTGACCTTATGCTT	NA	False	NA	-15	True	ATTAAA	-12	NA	78687242	78659337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ENSMUST00000164837.3	chr17	+	2523	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGGTGCTGTTACTT	NA	False	NA	7	True	AATAAA	-15	NA	15163491	15166196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15163582_15163763
ENSMUST00000164837.3-0	chr17	+	1536	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	39	948	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTTTAAGGTCATCG	NA	False	NA	8	True	AATAAA	-13	NA	15163530	15165248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15163582_15163763
ENSMUST00000164843.10	chr19	-	3122	22	FSM	ENSMUSG00000024942.20	ENSMUST00000164843.10	3122	22	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_21	51.1945734794372	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	1903	False	NA	-7	True	AATAAA	-13	NA	6065927	6038573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065765
ENSMUST00000164866.2	chr4	-	3203	16	FSM	ENSMUSG00000028345.16	ENSMUST00000164866.2	3203	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	267.714640781727	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCTGTTTGAAGTTAAT	8	True	NA	-17	True	ATTAAA	-14	NA	48473422	48430955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48472103_48472340_48473265
ENSMUST00000164890.8	chr8	+	2666	4	FSM	ENSMUSG00000031861.17	ENSMUST00000164890.8	5800	4	155	2979	0	-2979	multi-exon	FALSE	non_canonical	0	0	junction_3	8.48528137423857	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACGGAAAACGTCTCTT	489	False	NA	NA	False	ATTAAA	-14	NA	70275233	70280772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70275362_70276203_70276946_70278940_70280541_70280576
ENSMUST00000164891.8	chr11	-	1454	3	FSM	ENSMUSG00000018648.16	ENSMUST00000164891.8	1454	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	42	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCCCTTTATTAATCAT	NA	False	NA	-18	True	AATAAA	-11	NA	83959405	83938870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_83940137_83941657_83941747_83959306
ENSMUST00000164895.8	chr10	-	729	5	FSM	ENSMUSG00000042570.15	ENSMUST00000164895.8	729	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	104.389894146895	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGAAACACAGTCCTC	NA	False	NA	NA	False	NA	NA	NA	79390718	79384707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390379
ENSMUST00000164902.8	chr14	+	1461	13	FSM	ENSMUSG00000004561.15	ENSMUST00000164902.8	1461	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	49.8556248916141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGATGTAGAACAAGTGT	NA	False	NA	NA	False	NA	NA	NA	52122402	52129192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823
ENSMUST00000164904.2	chr5	-	2001	7	FSM	ENSMUSG00000001687.16	ENSMUST00000164904.2	2001	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	168.720100231781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATTTTATA	NA	False	NA	NA	False	ACTAAA	-28	NA	148489599	148441951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966_148489398_148489447
ENSMUST00000164907.3	chr17	-	1965	2	FSM	ENSMUSG00000054723.7	ENSMUST00000164907.3	1965	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTCTACCTTTTTTC	6865	False	NA	-6	True	AATAAA	-16	NA	57024680	57020935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57022818_57024597
ENSMUST00000164916.9	chr16	+	1073	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGGTGACTTT	NA	False	NA	25	True	ATTAAA	-22	NA	35892054	35912490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ENSMUST00000164916.9-0	chr16	+	678	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	395	0	0	0	multi-exon	FALSE	canonical	3	859	junction_1	27.9284800875379	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGGTGACTTT	NA	False	NA	25	True	ATTAAA	-22	NA	35892449	35912490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ENSMUST00000164936.10	chr13	+	3258	4	FSM	ENSMUSG00000090659.10	ENSMUST00000164936.10	3258	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	3.39934634239519	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGATTTTGGTCAGTG	NA	False	NA	5	True	NA	NA	NA	67927823	67937197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67927939_67931908_67932036_67932512_67932609_67934277
ENSMUST00000164950.11	chr16	+	1631	10	FSM	ENSMUSG00000055692.22	ENSMUST00000164950.11	1631	10	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_4	58.6725586266908	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17093940	17096525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ENSMUST00000164957.8	chr15	+	1055	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	130.244215056008	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCACCTGTGCCATTACC	2405	False	NA	16	True	AATAAA	-19	NA	102367636	102371217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
ENSMUST00000164971.8	chr8	-	2977	15	FSM	ENSMUSG00000000759.15	ENSMUST00000164971.8	2977	15	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_9	13.5111443041721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTTTTTAACTCCTGTT	NA	False	NA	NA	False	AAAAAG	-19	NA	12707620	12671798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445
ENSMUST00000164980.8	chr5	-	3136	9	FSM	ENSMUSG00000004530.13	ENSMUST00000164980.8	3136	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	320.074112511462	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046766	113980496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ENSMUST00000165007.9	chr17	-	1954	11	FSM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	118.520082686438	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46991840	46985478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
ENSMUST00000165015.9	chr14	+	1619	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	100	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	18	True	AATAAA	-16	NA	61835695	61843395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_61835796_61837242_61837345_61841978
ENSMUST00000165027.9	chr12	-	1293	11	FSM	ENSMUSG00000001627.13	ENSMUST00000165027.9	1293	11	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_4	41.528303601279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGAATTTGATGGCTG	NA	False	NA	NA	False	NA	NA	NA	40267512	40253360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376
ENSMUST00000165028.8	chr10	-	2676	14	FSM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_13	38.1023225308973	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79391033	79376078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ENSMUST00000165032.9	chr18	+	1977	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_3	2.70801280154532	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATTTGAGTTTGTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	53378733	53523992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
ENSMUST00000165052.8	chr7	-	4730	29	FSM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_28	22.1558429663829	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCATTTTGTTCCGTTC	NA	False	NA	-8	True	AATAAA	-36	NA	101487010	101471845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ENSMUST00000165095.9	chr15	-	3186	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	172.10531659423	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGCATCCACCCTCAT	NA	False	NA	4	True	AATAAA	-31	NA	83317016	83260318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
ENSMUST00000165096.9	chr7	-	2837	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	19.4401226165613	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTTTCCCTCTTAT	NA	False	NA	0	True	AATAAA	-21	NA	126613793	126586031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
ENSMUST00000165100.8	chr14	+	1430	13	FSM	ENSMUSG00000004561.15	ENSMUST00000165100.8	1430	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	37.728102552636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGGAAGAGAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	52122345	52129250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ENSMUST00000165105.2	chr9	+	2256	11	FSM	ENSMUSG00000025899.15	ENSMUST00000165105.2	2256	11	0	0	0	0	multi-exon	FALSE	canonical	2	45	junction_5	9.88989383158384	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTTTTGTGTTAAAAT	2925	False	NA	NA	False	NA	NA	NA	3338444	3385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ENSMUST00000165111.8	chr11	-	4162	27	FSM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	0	0	0	0	multi-exon	FALSE	canonical	3	2198	junction_15	361.710304905122	5588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTGATGCTCTTTTA	772	False	NA	-19	True	AATAAA	-13	NA	100414424	100367183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265
ENSMUST00000165113.8	chr4	-	6495	7	FSM	ENSMUSG00000041459.16	ENSMUST00000165113.8	6495	7	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	333.080404040159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGTAGTAGTCATTTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	148711453	148696838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUST00000165117.8	chr5	+	1582	8	FSM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	0	9943	0	-1160	multi-exon	FALSE	canonical	3	9	junction_1	33.2627143099493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTGTGCTGCCATTTCG	NA	False	NA	15	True	NA	NA	NA	3393892	3571065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3393972_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ENSMUST00000165123.8	chr18	+	4083	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	613.012254927549	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGAGGCTGGTTGTCT	428	False	NA	13	True	AATAAA	-16	NA	61688344	61723132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUST00000165123.8-0	chr18	+	2272	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	54	1757	0	0	multi-exon	FALSE	canonical	0	0	junction_9	613.012254927549	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	482	False	NA	27	True	ATTAAA	-20	NA	61688398	61721375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUST00000165126.9	chr8	-	387	3	FSM	ENSMUSG00000090137.9	ENSMUST00000165126.9	387	3	0	0	0	0	multi-exon	FALSE	canonical	3	22365	junction_1	190	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGGTCATACCTGGCA	NA	False	NA	-73	True	NA	NA	NA	70962273	70960981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70961179_70961945_70962033_70962170
ENSMUST00000165133.3	chr13	+	4287	4	FSM	ENSMUSG00000091311.4	ENSMUST00000165133.3	4287	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTCTTGTGCACTTTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	59860097	59867109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_59860315_59861449_59861490_59861948_59862010_59863140
ENSMUST00000165143.3	chr19	-	2391	18	FSM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	92.2413338358681	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1626	False	NA	NA	False	NA	NA	NA	6014230	5991134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ENSMUST00000165149.3	chr17	+	3389	20	FSM	ENSMUSG00000024036.17	ENSMUST00000165149.3	3389	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	17.4641698891444	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGATTTCCATCCAAGTC	NA	False	NA	NA	False	AATAAA	-45	NA	31515188	31569701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31515890_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
ENSMUST00000165183.10	chr17	-	2506	2	FSM	ENSMUSG00000050824.13	ENSMUST00000165183.10	2506	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACGTTCTTTTCCAAAGC	NA	False	NA	NA	False	AATAAA	-16	NA	25716189	25708850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25711263_25716095
ENSMUST00000165198.2	chr7	-	789	1	FSM	ENSMUSG00000044609.7	ENSMUST00000165198.2	789	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCTAGGAAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	42603812	42603023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42603000_42603800
ENSMUST00000165199.8	chr15	-	3492	9	FSM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	23.5358768691545	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTTTAGAAGCATCTAT	NA	False	NA	NA	False	NA	NA	NA	89361628	89356678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710_89360859_89361352
ENSMUST00000165210.8	chr15	-	4937	14	FSM	ENSMUSG00000022565.16	ENSMUST00000165210.8	4937	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	15.3703780275587	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGCCACCGCCTGCCTGT	8695	False	NA	NA	False	NA	NA	NA	76072243	76059579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76062586_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069686_76069804_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178
ENSMUST00000165223.8	chr1	+	7207	37	FSM	ENSMUSG00000064302.14	ENSMUST00000165223.8	7207	37	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_24	56.7641046811003	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCAGTTTTGTGTGTGTG	NA	False	NA	37	True	AATATA	-5	NA	118317184	118537221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118449556_118449665_118453026_118453186_118466995_118467100_118470831_118471077_118473122_118473187_118475385_118475389_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ENSMUST00000165229.4	chr18	-	370	1	FSM	ENSMUSG00000091449.4	ENSMUST00000165229.4	370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGATGACAACGACAACAAA	NA	False	NA	NA	False	NA	NA	NA	20816020	20815650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_20815600_20816000
ENSMUST00000165230.8	chr17	+	2832	5	FSM	ENSMUSG00000023882.16	ENSMUST00000165230.8	2832	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.7340317027013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCATGTTCCTTGAC	NA	False	NA	NA	False	NA	NA	NA	21643488	21655902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21643824_21647593_21647634_21647998_21648091_21650456_21650584_21653664
ENSMUST00000165234.2	chr2	-	1626	12	FSM	ENSMUSG00000038383.17	ENSMUST00000165234.2	1626	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	54.6966087455563	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGTTCTGATGACATG	NA	False	NA	-1	True	AATAAA	-22	NA	155199344	155120163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173071_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ENSMUST00000165241.8	chr7	-	1668	4	FSM	ENSMUSG00000050605.18	ENSMUST00000165241.8	1668	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	5.31245915016974	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAAAAGACTCGTATC	NA	False	NA	-11	True	TATAAA	-5	NA	23995406	23990481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403
ENSMUST00000165242.4	chr6	-	2679	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	0	0	0	0	multi-exon	TRUE	canonical	3	371	junction_3	47.1643108952333	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGATCAAATGACTT	NA	False	NA	-8	True	ATTAAA	-16	NA	88423521	88234315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUST00000165242.4-0	chr6	-	2128	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	12	539	0	0	multi-exon	FALSE	canonical	3	371	junction_3	47.1643108952333	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAGTGTGCCCATAGT	NA	False	NA	-17	True	AATAAA	-12	NA	88423509	88234854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUST00000165257.8	chr7	-	2514	2	FSM	ENSMUSG00000049580.13	ENSMUST00000165257.8	2514	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTTGCTGACAAATC	NA	False	NA	2	True	AATAAA	-30	NA	98010535	97999874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98002338_98010484
ENSMUST00000165266.2	chr8	-	476	5	FSM	ENSMUSG00000003848.15	ENSMUST00000165266.2	476	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	207.969949752362	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAACATTGACCGTGA	NA	False	NA	NA	False	NA	NA	NA	108151658	108144981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_108145075_108145331_108145404_108148113_108148245_108151383_108151503_108151597
ENSMUST00000165306.3	chr17	+	1518	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	21.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTTTACTTTCTTGAA	4589	False	NA	14	True	AATAAA	-14	NA	35340458	35343790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35340775_35342028_35342636_35343195
ENSMUST00000165307.8	chr3	+	3274	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_5	106.857641540301	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	False	NA	105	True	AATAAA	-22	NA	95836557	95854702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUST00000165311.3	chr19	+	5037	11	FSM	ENSMUSG00000025189.10	ENSMUST00000165311.3	5037	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	3.04795013082563	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGCTTTGCTTGCCCA	NA	False	NA	NA	False	AATAAA	-44	NA	43428874	43485649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_43430457_43453559_43453704_43456679_43456821_43458047_43458218_43460287_43460388_43460815_43460864_43473283_43473448_43479859_43480044_43480202_43480353_43482148_43482251_43483397
ENSMUST00000165313.2	chr2	-	1975	5	FSM	ENSMUSG00000036249.17	ENSMUST00000165313.2	1975	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.0455931256497	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGAGCTGCATCATT	NA	False	NA	NA	False	NA	NA	NA	51824656	51814462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824559
ENSMUST00000165315.9	chr9	-	3109	28	FSM	ENSMUSG00000032422.19	ENSMUST00000165315.9	3109	28	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_13	28.9754164757839	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTATTTACTGTCT	NA	False	NA	-2	True	AATAAA	-40	NA	88321004	88258802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUST00000165335.8	chr4	+	3143	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_11	1088.68406424249	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575817	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUST00000165335.8-0	chr4	+	1678	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	9	1456	0	160	multi-exon	FALSE	canonical	3	731	junction_11	1088.68406424249	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCCTGAGTGTGATTG	NA	False	NA	5	True	AATAAA	-15	NA	155575826	155642270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUST00000165363.10	chr16	+	3046	19	FSM	ENSMUSG00000005899.15	ENSMUST00000165363.10	3046	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	65.2123075939534	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATACCAAC	NA	False	NA	NA	False	NA	NA	NA	17437223	17461211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457707_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUST00000165386.2	chr15	-	798	9	FSM	ENSMUSG00000091119.3	ENSMUST00000165386.2	798	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	8.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGCACTTAATGCATTA	8096	False	NA	NA	False	NA	NA	NA	3333008	3310108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_3310232_3310504_3310589_3312299_3312428_3319606_3319710_3321861_3321927_3323334_3323404_3327582_3327689_3330586_3330676_3332977
ENSMUST00000165392.8	chr6	-	1643	4	FSM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.0636362518253	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTCCTGTGGATTTTGT	NA	False	NA	-3	True	ACTAAA	-34	NA	134874778	134846055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134847407_134864592_134864749_134874124_134874177_134874694
ENSMUST00000165394.9	chr7	-	1228	7	FSM	ENSMUSG00000005575.17	ENSMUST00000165394.9	1228	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	840.033679880357	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGAAGAATCGGCTAAT	8441	False	NA	NA	False	NA	NA	NA	12772202	12769046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547_12771633_12771996
ENSMUST00000165413.9	chr2	+	2882	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	11.4406682011537	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGGCCCATGTAGCAGC	6231	False	NA	NA	False	NA	NA	NA	129642436	129670894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
ENSMUST00000165416.8	chr2	-	1427	6	FSM	ENSMUSG00000002458.14	ENSMUST00000108778.8	1427	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	53.6261130420619	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTTGTTATGGTCTT	NA	False	NA	0	True	AGTAAA	-13	NA	181333610	181330296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181333513
ENSMUST00000165418.9	chr16	+	9830	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAGCTGAAACAGCTG	NA	False	NA	NA	False	TTTAAA	-33	NA	33201205	33324733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUST00000165418.9-0	chr16	+	4083	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	27	5720	0	0	multi-exon	FALSE	canonical	3	136	junction_3	9.03811374126261	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCACGAATGTTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	33201232	33319013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUST00000165443.4	chr15	+	4766	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGGTACTGTTCTGTT	NA	False	NA	19	True	AATAAA	-19	NA	84807611	84827164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ENSMUST00000165443.4-0	chr15	+	1810	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	0	2956	0	0	multi-exon	FALSE	canonical	3	399	junction_4	38.703477668983	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTTCTCCCTTCCTAA	NA	False	NA	23	True	AATAAA	-17	NA	84807611	84824208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ENSMUST00000165445.3	chr7	+	1407	4	FSM	ENSMUSG00000058028.15	ENSMUST00000165445.3	1407	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGATCCAGTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	6233177	6242189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6233538_6234335_6234537_6236813_6236968_6241497
ENSMUST00000165460.2	chr7	+	3069	10	FSM	ENSMUSG00000045795.11	ENSMUST00000165460.2	3069	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	9.86576572463249	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCGTTTCCAGAGGCC	6984	False	NA	NA	False	ATTAAA	-15	NA	81221039	81246584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_81221658_81224293_81224468_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
ENSMUST00000165485.8	chr19	+	1557	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	7.8873316146844	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGCTGAGGTGGGTGA	NA	False	NA	10	True	AATAAA	-15	NA	5524715	5531881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUST00000165488.4	chr7	-	276	1	FSM	ENSMUSG00000090467.4	ENSMUST00000165488.4	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGCCCTGCTGTCTGAG	8776	False	NA	NA	False	NA	NA	NA	25528302	25528026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25528000_25528300
ENSMUST00000165492.8	chr6	-	2299	5	FSM	ENSMUSG00000029687.17	ENSMUST00000165492.8	2299	5	0	0	0	0	multi-exon	FALSE	canonical	3	802	junction_4	36.5880786595853	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACATACTCGTGCATT	NA	False	NA	NA	False	AATGAA	-25	NA	47522817	47510675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47510772_47517610_47519341_47520879_47520975_47521373_47521544_47522609
ENSMUST00000165519.2	chr9	-	6133	6	FSM	ENSMUSG00000035164.9	ENSMUST00000165519.2	6133	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	4.57820925690384	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTATGTTGTATTTTTT	NA	False	NA	NA	False	TATAAA	-7	NA	52079411	52023284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974_52055727_52079330
ENSMUST00000165532.3	chr9	+	1009	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	0	0	0	0	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCATAGTCGAGTATAA	NA	False	NA	26	True	AATAAA	-35	NA	120400509	120403720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUST00000165532.3-0	chr9	+	720	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	70	219	0	0	multi-exon	FALSE	canonical	3	10044	junction_1	2651.61525112525	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	NA	False	NA	19	True	AATAAA	-23	NA	120400579	120403501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUST00000165536.8	chr5	+	5221	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_4	186.681547025945	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	8	True	AATAAA	-16	NA	64960730	64990244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ENSMUST00000165561.4	chr13	+	4483	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGCCTCATTGGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	41403319	41430053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41403791_41426041
ENSMUST00000165563.8	chr10	+	2442	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	0	0	0	0	multi-exon	FALSE	canonical	2	105	junction_7	32.1836157690049	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTGTGTCCTTTCTTT	NA	False	NA	27	True	NA	NA	NA	59538298	59699954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
ENSMUST00000165576.8	chr6	-	2826	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	18	False	22356183	0	True	ATTAAA	-22	NA	22356165	22306518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ENSMUST00000165576.8-0	chr6	-	1464	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	0	1362	0	0	multi-exon	FALSE	canonical	3	400	junction_3	15.4416464292006	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGATTTGTGAAAAGCA	18	False	22356183	-21	True	AATAAA	-21	NA	22356165	22307880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ENSMUST00000165594.4	chr9	+	2516	14	FSM	ENSMUSG00000001833.18	ENSMUST00000165594.4	2516	14	0	0	0	0	multi-exon	FALSE	canonical	1	89	junction_1	420.498140769412	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163746	25219862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_25163996_25175498_25175504_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUST00000165596.8	chr9	-	3726	21	FSM	ENSMUSG00000032480.18	ENSMUST00000165596.8	3726	21	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_20	126.75089743272	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109944145	109913388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103
ENSMUST00000165602.9	chr1	-	8101	20	FSM	ENSMUSG00000026463.18	ENSMUST00000165602.9	8101	20	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_19	4.16554924998092	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCGTCTGGGTCTGCATG	8622	False	NA	-1	True	AATAAA	-24	NA	133681485	133630411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ENSMUST00000165607.9	chr9	+	3495	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.822246885334	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCATTTACTCTTGGGGG	NA	False	NA	NA	False	NA	NA	NA	79974774	80051188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUST00000165619.8	chr14	-	1949	7	FSM	ENSMUSG00000094628.8	ENSMUST00000165619.8	1949	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.60874597374975	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	17742998	17722279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_17723423_17725968_17726152_17726826_17726959_17727908_17728072_17728803_17728939_17741428_17741543_17742919
ENSMUST00000165628.9	chr8	-	2973	5	FSM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_4	173.639713199487	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGCATCT	3705	False	NA	36	True	ATTAAA	-15	NA	124748136	124723056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747927
ENSMUST00000165630.3	chr8	+	2267	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	29.4884965464743	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTCTGGCGGAAGCAA	NA	False	NA	12	True	AATAAA	-25	NA	75760332	75796749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ENSMUST00000165649.4	chr14	-	3188	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	0	0	0	0	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTAGTTGGGTAGTGG	NA	False	NA	NA	False	AATAAA	-25	NA	36857209	36842048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUST00000165649.4-0	chr14	-	1349	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	-20	1859	0	-1127	multi-exon	FALSE	canonical	3	4955	junction_4	366.305861780835	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857229	36843907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUST00000165684.8	chr10	-	2950	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	18.1911617921159	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAAGA	1837	False	NA	NA	False	NA	NA	NA	79744732	79730768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ENSMUST00000165686.2	chr17	+	608	2	FSM	ENSMUSG00000023952.14	ENSMUST00000165686.2	608	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATCACTTGGGAGTCAG	NA	False	NA	NA	False	NA	NA	NA	46472086	46473084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46472253_46472642
ENSMUST00000165704.8	chr10	+	3169	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_7	276.779833782898	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGACCACGTAATAGCATAA	1585	False	NA	NA	False	ATTAAA	-16	NA	79690462	79700605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUST00000165721.8	chr18	+	2323	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	467	False	NA	27	True	ATTAAA	-20	NA	61688383	61721375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUST00000165721.8-0	chr18	+	4065	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	15	-1757	0	0	multi-exon	FALSE	canonical	3	816	junction_9	364.192494210831	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGAGGCTGGTTGTCT	482	False	NA	13	True	AATAAA	-16	NA	61688398	61723132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUST00000165735.9	chr9	-	1376	5	FSM	ENSMUSG00000001348.16	ENSMUST00000165735.9	1376	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	107.395006867172	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	5016	False	NA	-19	True	AATAAA	-21	NA	22047007	22038022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22046908
ENSMUST00000165740.9	chr8	-	1120	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_9	1051.54616581631	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321113	84298328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ENSMUST00000165766.9	chr9	+	3063	21	FSM	ENSMUSG00000033335.18	ENSMUST00000165766.9	3063	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	219.759049870534	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	5842	False	NA	15	True	AATAAA	-16	NA	21336203	21419050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ENSMUST00000165790.9	chr16	+	2544	7	FSM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	179.822520527572	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTGTTACATCTAATG	NA	False	NA	1	True	AATAAA	-10	NA	17577540	17611228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUST00000165806.8	chr10	+	1775	11	FSM	ENSMUSG00000019794.14	ENSMUST00000165806.8	1775	11	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_4	21.6323831327018	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTCAATTTAGCACC	NA	False	NA	10	True	AATAAA	-19	NA	7601763	7638914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ENSMUST00000165839.3	chr9	+	2086	8	FSM	ENSMUSG00000032114.10	ENSMUST00000165839.3	2086	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.22044030202207	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCAGTGGCTCATCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	44309472	44314263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUST00000165853.2	chr4	+	3382	6	FSM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1089.03101884198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACAGTTCATGTTTGCTC	NA	False	NA	40	True	AATAAA	-41	NA	129714500	129743796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ENSMUST00000165859.8	chr1	+	3396	9	FSM	ENSMUSG00000043015.16	ENSMUST00000165859.8	3396	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	7.49061913328932	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669861	52691078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682280_52682396_52684419_52684646_52687908_52688086_52688864
ENSMUST00000165861.8	chr4	+	3361	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.2752524039045	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCAGTACCTGTCCT	5069	False	NA	42	True	AATAAA	-40	NA	137944441	137970481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUST00000165876.8	chr9	+	5573	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_18	61.7868698345418	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109760931	109913015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ENSMUST00000165952.9	chr10	+	7209	8	FSM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	35.692564823412	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACTGGAAAGCTGAAT	NA	False	NA	23	True	AATAAA	-26	NA	7556977	7592224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ENSMUST00000165953.3	chr17	+	1381	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	101.735146335964	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATTGTAACTGCTTT	4	True	NA	NA	False	AAAAAG	-13	NA	35069383	35075348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUST00000165956.3	chr3	+	6503	3	FSM	ENSMUSG00000033883.12	ENSMUST00000165956.3	6503	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATATACTACTATTA	5526	False	NA	21	True	AATAAA	-12	NA	36213670	36224484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_36213798_36216780_36216877_36218204
ENSMUST00000165964.10	chr7	+	3166	28	FSM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	177.886980349259	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	3059	False	NA	30	True	AATAAA	-18	NA	13013190	13045350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_13013400_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUST00000165965.8	chr19	-	2874	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	4287	False	NA	NA	False	AAGAAA	-13	NA	7318798	7254123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUST00000165965.8-1	chr19	-	4664	18	FSM	ENSMUSG00000024969.16	ENSMUST00000165965.8	2874	18	-427	-1363	0	0	multi-exon	FALSE	canonical	0	0	junction_3	87.3120720397554	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3860	False	NA	-1	True	AATAAA	-20	NA	7319225	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUST00000165971.3	chr10	-	2532	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	10.8639169436269	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTATGTATTTCCTAA	NA	False	NA	-29	True	AATAAA	-15	NA	59057669	58999941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ENSMUST00000165978.3	chr12	+	7778	20	FSM	ENSMUSG00000021275.17	ENSMUST00000165978.3	7778	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.72278616298412	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAATTTTGCAGTAT	5383	False	NA	15	True	NA	NA	NA	110855697	110938828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ENSMUST00000165981.8	chr14	-	2415	11	FSM	ENSMUSG00000021910.16	ENSMUST00000165981.8	2415	11	0	0	0	0	multi-exon	FALSE	canonical	3	935	junction_6	81.5207948930824	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAGAAAGAAAA	9422	False	NA	NA	False	AATGAA	-35	NA	30928657	30907646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUST00000165999.2	chr17	+	2942	13	FSM	ENSMUSG00000091586.3	ENSMUST00000165999.2	1693	13	0	-1249	0	0	multi-exon	FALSE	canonical	2	14	junction_12	8.54725426997206	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAGAAAAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	32725435	32749117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ENSMUST00000166004.3	chr8	-	5305	27	FSM	ENSMUSG00000031833.11	ENSMUST00000166004.3	5305	27	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_26	15.3892300771307	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGGTGTGTGCATTTGTG	NA	False	NA	0	True	AATAAA	-20	NA	71249632	71230760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71249356_71249447_71249543
ENSMUST00000166010.2	chrX	-	1318	4	FSM	ENSMUSG00000025264.13	ENSMUST00000166010.2	1318	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	140.42158745087	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATCCATTGTCCTCCCC	NA	False	NA	-3	True	AATAAA	-21	NA	149879539	149872476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879424
ENSMUST00000166021.8	chr3	+	1768	9	FSM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	81.6783898898601	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGTTTTGTTTTTGA	1719	False	NA	39	True	TTTAAA	-28	NA	87950414	87963300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87950487_87950773_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUST00000166033.6	chr3	+	2504	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	0	0	0	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATGTAATTTGGACAT	NA	False	NA	NA	False	AATAAA	-29	NA	135144240	135172711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000166033.6-0	chr3	+	1559	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	53	892	0	0	multi-exon	FALSE	canonical	2	723	junction_1	704.867942473291	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144293	135171819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000166044.3	chr18	+	3107	19	FSM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	232.455445087047	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGATTCCAAATTTAGAA	6275	False	NA	23	True	AATAAA	-20	NA	34758085	34765858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34758317_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUST00000166078.9	chr8	-	2234	15	FSM	ENSMUSG00000031575.19	ENSMUST00000166078.9	2234	15	0	0	0	0	multi-exon	FALSE	canonical	3	3119	junction_12	186.608342443171	2006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTCACTGGAAGTGA	NA	False	NA	-6	True	AATAAA	-25	NA	26330110	26306897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039
ENSMUST00000166082.8	chr7	-	4222	13	FSM	ENSMUSG00000025512.16	ENSMUST00000166082.8	4222	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	22.800310670398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCTGGTGTCTGCTGCC	NA	False	NA	NA	False	NA	NA	NA	141119770	141073049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ENSMUST00000166096.2	chr7	+	468	1	FSM	ENSMUSG00000091989.2	ENSMUST00000166096.2	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCAGAGCCTTCTTCCT	4287	False	NA	NA	False	AAGAAA	-42	NA	80157534	80158002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_80157500_80158000
ENSMUST00000166099.3	chr5	+	1101	5	FSM	ENSMUSG00000079165.11	ENSMUST00000166099.3	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	13.4976849866931	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTGCAGTGGGACAT	1204	False	NA	26	True	AATAAA	-18	NA	137639698	137641164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ENSMUST00000166104.9	chr13	+	1193	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_2	16.9844700306551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATAGATCCTGTCTCC	NA	False	NA	NA	False	AATAAA	-18	NA	114954771	114965259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUST00000166109.8	chr13	-	943	5	FSM	ENSMUSG00000021417.16	ENSMUST00000166109.8	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	12.3161479367536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACAGAAGTCTGGACCA	NA	False	NA	NA	False	NA	NA	NA	35172805	35162684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265
ENSMUST00000166115.9	chr19	-	1858	7	FSM	ENSMUSG00000024958.14	ENSMUST00000166115.9	1858	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	2.47767812455308	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTGTTCCTTCTCACC	6813	False	NA	1	True	AATAAA	-32	NA	6918561	6915424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
ENSMUST00000166117.4	chr12	-	3290	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	-35	2013	0	637	multi-exon	FALSE	canonical	3	36	junction_2	6.04323672043149	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTCTTGAAATGTCTT	NA	False	NA	NA	False	AATATA	-15	NA	11315802	11290933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ENSMUST00000166120.9	chr12	-	990	6	FSM	ENSMUSG00000021079.17	ENSMUST00000166120.9	990	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	130.329735670721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTTGTCTTTACTGTA	NA	False	NA	-19	True	AATAAA	-12	NA	71183422	71169947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71179280_71179417_71183328
ENSMUST00000166123.9	chr12	+	4050	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	0	0	0	0	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCACTTGGGGTTTTTTTT	NA	False	NA	12	True	AAAACA	-18	NA	111504449	111513186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUST00000166123.9-0	chr12	+	3686	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	200	164	0	0	multi-exon	FALSE	canonical	3	1736	junction_1	190.905151474506	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504649	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUST00000166135.8	chr6	-	3558	9	FSM	ENSMUSG00000003153.11	ENSMUST00000166135.8	1321	9	-132	-2105	0	0	multi-exon	FALSE	canonical	2	11	junction_7	3124.24898975738	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8913	False	NA	-21	True	AATAAA	-12	NA	122719481	122704784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122717346_122717440_122719334
ENSMUST00000166137.3	chr1	+	2079	5	FSM	ENSMUSG00000037860.16	ENSMUST00000166137.3	2079	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	17.7341478509682	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAAGTTTGTGACTGT	NA	False	NA	15	True	AATAAA	-33	NA	173282919	173293598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ENSMUST00000166139.7	chr1	-	3897	8	FSM	ENSMUSG00000037568.13	ENSMUST00000166139.7	3897	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.82946406783796	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCCTCTTAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	190711493	190679842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600_190702690_190710377_190710785_190711333
ENSMUST00000166155.2	chr15	+	1699	12	FSM	ENSMUSG00000068206.14	ENSMUST00000166155.2	1699	12	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_8	27.1253594255807	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCTGGGGCCAGTGTA	4703	False	NA	NA	False	NA	NA	NA	79113901	79133529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUST00000166168.8	chr9	-	2784	17	FSM	ENSMUSG00000047766.16	ENSMUST00000166168.8	2784	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	7.03312475006664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCCAGTTTG	4119	False	NA	NA	False	AATAAA	-11	NA	60594817	60494521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60594693
ENSMUST00000166169.4	chr14	-	3017	6	FSM	ENSMUSG00000049295.18	ENSMUST00000166169.4	3017	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	162.277540035582	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGCCCTGTGTGTGTCT	5739	False	NA	-11	True	AATAAA	-16	NA	52257145	52243542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52256951
ENSMUST00000166171.8	chr2	-	2312	10	FSM	ENSMUSG00000074656.13	ENSMUST00000166171.8	2312	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	4169.46393510879	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	3785	False	NA	-16	True	AATAAA	-24	NA	154734702	154713337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_154714091_154714159_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUST00000166176.9	chr13	+	1042	6	FSM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	12	801	0	0	multi-exon	FALSE	canonical	3	20	junction_1	59.3450924677011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	114954806	114965265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_114954860_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUST00000166192.7	chr6	-	3155	24	FSM	ENSMUSG00000025607.16	ENSMUST00000166192.7	3155	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	47.3145369461355	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCAAAGTTGCTATACT	NA	False	NA	-14	True	AATAAA	-15	NA	30873729	30748410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30748987_30749404_30749501_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUST00000166214.9	chr18	+	2906	24	FSM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_23	153.127237455201	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTGGGTTCTTTTTTTCT	9050	False	NA	14	True	ATTAAA	-7	NA	32970363	32999453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32998972_32999240
ENSMUST00000166223.2	chr15	-	1908	16	FSM	ENSMUSG00000022464.15	ENSMUST00000166223.2	1908	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	409.635849125646	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGTGCAGTGCAGTGTG	NA	False	NA	-9	True	ATTAAA	-26	NA	96918203	96894645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96918183
ENSMUST00000166232.4	chr8	-	3142	7	FSM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	42.5597619040959	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCTACAGAAATGCTTG	NA	False	NA	-2	True	AATAAA	-17	NA	112470441	112437105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
ENSMUST00000166250.8	chr7	+	3606	6	FSM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	149.360503480673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTACCCGGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	79674581	79741578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181_79736357_79738282_79738381_79740082
ENSMUST00000166278.7	chr3	+	1689	3	FSM	ENSMUSG00000037661.15	ENSMUST00000166278.7	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910098	30951341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30910207_30931383_30931482_30949858
ENSMUST00000166282.3	chr2	+	5445	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	55	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGTGATTTTTA	6231	False	NA	34	True	AATAAA	-41	NA	129642436	129674207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129642767_129643323_129643925_129669693
ENSMUST00000166298.8	chr5	-	1755	7	FSM	ENSMUSG00000029209.16	ENSMUST00000166298.8	1755	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	51.3517283058711	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGATTATTGTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	69748171	69732512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_69733297_69735320_69735496_69736850_69737030_69742316_69742500_69743807_69743910_69747003_69747167_69748002
ENSMUST00000166312.8	chr11	-	2025	12	FSM	ENSMUSG00000020863.16	ENSMUST00000166312.8	5244	12	-30	3249	0	0	multi-exon	FALSE	canonical	3	40	junction_1	82.4268270539502	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212814	94181964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_94182405_94183752_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUST00000166318.8	chr6	+	2222	14	FSM	ENSMUSG00000038388.15	ENSMUST00000166318.8	2222	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	409.736760637548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTAAGTTTTGATTTA	NA	False	NA	19	True	CATAAA	-16	NA	50087220	50175578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50153856_50153899_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ENSMUST00000166341.2	chr3	-	4652	7	FSM	ENSMUSG00000038256.16	ENSMUST00000166341.2	4652	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	9.51168871558685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACATGGGGATCCCGTGA	NA	False	NA	NA	False	TTTAAA	-12	NA	97123823	97111943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628
ENSMUST00000166360.8	chr10	-	3439	10	FSM	ENSMUSG00000001211.16	ENSMUST00000166360.8	3439	10	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_9	86.9833246400257	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATGCTTTTTCTCTT	NA	False	NA	-13	True	AATAAA	-5	NA	78187534	78107396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460
ENSMUST00000166364.8	chr5	-	2509	10	FSM	ENSMUSG00000002297.17	ENSMUST00000166364.8	2509	10	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	51.6858984517579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTTGTCTAGTTGTATTG	NA	False	NA	NA	False	TATAAA	-4	NA	8472681	8451660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ENSMUST00000166382.5	chr5	-	3238	3	FSM	ENSMUSG00000061898.11	ENSMUST00000166382.5	3238	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGTTTATGTGTTGTG	3263	False	NA	NA	False	GATAAA	-2	NA	143162489	143157941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143160814_143161790_143161887_143162219
ENSMUST00000166384.8	chr1	+	3706	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	31.0518090254014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	9868331	9971068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUST00000166384.8-0	chr1	+	2878	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	-162	990	-162	0	multi-exon	TRUE	canonical	3	15	junction_1	31.0518090254014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGTGTGAATGTGTG	NA	False	NA	NA	False	AATAAA	-11	NA	9868169	9970078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUST00000166388.2	chr2	+	4181	17	FSM	ENSMUSG00000026979.17	ENSMUST00000166388.2	4181	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.49857936198069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCCCTTGCACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	24276628	24298212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_24276722_24284033_24285053_24286316_24286446_24286688_24286798_24287222_24287578_24290432_24290613_24291025_24291107_24291232_24291346_24291535_24291595_24291743_24291834_24292882_24292927_24293211_24293373_24294393_24294465_24294748_24294913_24295318_24295464_24295698_24295843_24296988
ENSMUST00000166397.3	chr5	-	1694	13	FSM	ENSMUSG00000066900.12	ENSMUST00000166397.3	1694	13	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	144.428375174533	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254178	117230501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ENSMUST00000166397.3-0	chr5	-	2275	13	FSM	ENSMUSG00000066900.12	ENSMUST00000166397.3	1694	13	171	-752	56	0	multi-exon	FALSE	canonical	3	113	junction_1	144.428375174533	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTGCCACGTGGTCT	NA	False	NA	-9	True	GATAAA	-13	NA	117254007	117229749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_117230922_117231010_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ENSMUST00000166407.9	chr19	+	1033	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	323.787653323045	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTATATGCCTGGCTC	5912	False	NA	25	True	AATAAA	-13	NA	8848922	8853020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUST00000166411.8	chr2	+	2088	12	FSM	ENSMUSG00000068882.14	ENSMUST00000166411.8	2088	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	503.342431457735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTCACTTTGGACATA	NA	False	NA	22	True	ATTAAA	-23	NA	69691905	69702190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69692084_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUST00000166411.8-0	chr2	+	1691	12	FSM	ENSMUSG00000068882.14	ENSMUST00000166411.8	2088	12	61	336	0	0	multi-exon	FALSE	canonical	3	62	junction_1	503.342431457735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691966	69701854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_69692084_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUST00000166412.2	chr19	+	447	4	FSM	ENSMUSG00000036372.15	ENSMUST00000166412.2	447	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1710.34778789448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTCCATTCTTAGGG	245	False	NA	33	True	AATAAA	-22	NA	10183396	10185188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10183489_10183787_10183898_10184527_10184665_10185080
ENSMUST00000166439.8	chr7	-	1997	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAGAACAAAAGAAAAA	NA	False	NA	43	True	NA	NA	NA	132724895	132589312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
ENSMUST00000166439.8-0	chr7	-	2161	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	-201	37	0	0	multi-exon	FALSE	canonical	3	156	junction_8	235.790763073148	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725096	132589349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
ENSMUST00000166478.8	chrX	-	1720	3	FSM	ENSMUSG00000031422.17	ENSMUST00000166478.8	1720	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1436	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135644435	135633701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135635251_135636294_135636372_135644341
ENSMUST00000166489.8	chr4	+	1419	7	FSM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	30	1890	0	0	multi-exon	FALSE	canonical	3	339	junction_1	277.674519696873	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	787	False	NA	37	True	TATAAA	-19	NA	156028317	156042171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUST00000166494.2	chr14	-	1980	7	FSM	ENSMUSG00000079410.5	ENSMUST00000166494.2	1980	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.77491721763537	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGTGTATGCTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	19420488	19392932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_19394066_19397574_19397758_19398432_19398565_19399514_19399678_19403544_19403708_19414572_19414724_19420433
ENSMUST00000166495.8	chr2	-	5497	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGTATGTATAATATT	NA	False	NA	NA	False	AATAAA	-21	NA	18397641	18218559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ENSMUST00000166495.8-0	chr2	-	2558	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	6	2933	0	453	multi-exon	FALSE	canonical	3	39	junction_5	8.9016666653772	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACGCTTTGGGCTTGT	NA	False	NA	-6	True	AATACA	-45	NA	18397635	18221492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ENSMUST00000166497.9	chr14	-	2226	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGGCAACACCCAGGTA	NA	False	NA	NA	False	AATAAA	-13	NA	14466871	14413009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ENSMUST00000166497.9-0	chr14	-	1491	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	0	735	0	-637	multi-exon	FALSE	canonical	3	60	junction_8	7.63216876123687	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGTTGTTGCTTCCG	NA	False	NA	-4	True	ATTAAA	-14	NA	14466871	14413744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ENSMUST00000166498.8	chr12	+	2076	12	FSM	ENSMUSG00000021111.16	ENSMUST00000166498.8	2076	12	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_9	335.398664968735	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTGTCTCTGTGTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	105750991	105780328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456
ENSMUST00000166505.7	chr3	-	4399	2	FSM	ENSMUSG00000090919.7	ENSMUST00000166505.7	5218	2	0	819	0	-819	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATGCCTTCAGCCAG	NA	False	NA	NA	False	AATAAA	-16	NA	46402376	46397450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_46401725_46402251
ENSMUST00000166518.8	chrX	+	800	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_1	165.944569058466	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACACGGGGCTCCTGTGT	5432	False	NA	46	True	AATAAA	-28	NA	72830633	72834430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUST00000166526.9	chr17	-	923	8	FSM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_5	2353.82216310201	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGACTTCTTGTAAC	NA	False	NA	-17	True	AATAAA	-19	NA	31877743	31866054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
ENSMUST00000166527.2	chr14	+	1239	4	FSM	ENSMUSG00000093948.8	ENSMUST00000166527.2	1239	4	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	22.1710521977545	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42477895	42485562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_42478059_42479014_42479147_42479826_42480008_42484799
ENSMUST00000166543.10	chr17	-	3799	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	0	0	0	0	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTGATTTTTGTACGG	NA	False	NA	NA	False	NA	NA	NA	66192793	66155760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ENSMUST00000166543.10-0	chr17	-	2373	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	484	942	-360	122	multi-exon	FALSE	canonical	1	126	junction_9	189.388163682976	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGAGTGGCTTCTTTTT	NA	False	NA	-28	True	NA	NA	NA	66192309	66156702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ENSMUST00000166549.2	chr9	+	1747	2	FSM	ENSMUSG00000007656.14	ENSMUST00000166549.2	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	5814	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTTTTTTGTTATGCTGA	5764	False	NA	4	True	AATAAA	-13	NA	74959332	74965358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_74959638_74963916
ENSMUST00000166554.2	chrX	+	4993	5	FSM	ENSMUSG00000043384.16	ENSMUST00000166554.2	4993	5	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_2	19.765816451642	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	NA	False	NA	10	True	AATAAA	-17	NA	134698336	134704215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ENSMUST00000166557.2	chr19	-	450	2	FSM	ENSMUSG00000025204.11	ENSMUST00000166557.2	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	4735	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCGAGGTTATCATAGC	1991	False	NA	NA	False	NA	NA	NA	44543862	44543153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44543497_44543755
ENSMUST00000166592.2	chr8	+	4884	25	FSM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	94.0795227306252	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763796	85784212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUST00000166603.2	chr10	+	1078	6	FSM	ENSMUSG00000020307.16	ENSMUST00000166603.2	1078	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	763.990157004657	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGAGAGAATCACCT	NA	False	NA	17	True	AATAAA	-17	NA	79518137	79524228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79518159_79518233_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ENSMUST00000166605.2	chr12	+	915	3	FSM	ENSMUSG00000021244.16	ENSMUST00000166605.2	915	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTTTTACTGTATG	284	False	NA	5	True	NA	NA	NA	85111452	85117189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85111876_85116392_85116574_85116878
ENSMUST00000166608.8	chr10	-	979	7	FSM	ENSMUSG00000025374.14	ENSMUST00000166608.8	979	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	121.06942452806	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAAAGACAGTGTGGTTT	NA	False	NA	-86	True	NA	NA	NA	128245591	128237342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245524
ENSMUST00000166610.8	chr15	-	6573	13	FSM	ENSMUSG00000033565.19	ENSMUST00000166610.8	6573	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	66.7536931978715	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCTGGCGTTTTGGCTCC	NA	False	NA	-8	True	AATAAA	-14	NA	77038012	76963190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ENSMUST00000166615.3	chr8	+	4314	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTGTCAGTGTAGCT	NA	False	NA	11	True	AATAAA	-14	NA	108162996	108285227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUST00000166615.3-0	chr8	+	2881	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	51	1382	0	0	multi-exon	FALSE	canonical	3	576	junction_9	55.7196601685668	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163047	108283845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUST00000166619.8	chr17	-	2238	6	FSM	ENSMUSG00000025730.15	ENSMUST00000166619.8	2238	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	88.3932124090985	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTTGTGTCTGGCTTCA	NA	False	NA	-4	True	AGTAAA	-14	NA	26132606	26101090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26132583
ENSMUST00000166627.8	chr17	+	1211	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	162.952702749397	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	4917	False	NA	29	True	AATACA	-19	NA	33848063	33850690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUST00000166646.2	chr14	-	5504	30	FSM	ENSMUSG00000032849.15	ENSMUST00000166646.2	5504	30	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_27	53.1124264689735	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAGATCTGTTTGTTC	NA	False	NA	-8	True	AATAAA	-18	NA	118943631	118720103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118905758_118905880_118906408_118906520_118943447
ENSMUST00000166664.2	chr12	-	789	6	FSM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	5	1490	0	-1490	multi-exon	FALSE	canonical	3	129	junction_3	88.6715286887511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	NA	False	NA	-6	True	ATTAAA	-14	NA	81579651	81518866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUST00000166687.6	chr3	-	1922	9	FSM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_8	11.2354072022335	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATGTGTCCCTGTG	NA	False	NA	-5	True	AATAAA	-13	NA	88997352	88991287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997277
ENSMUST00000166693.3	chr17	-	271	4	FSM	ENSMUSG00000067288.14	ENSMUST00000166693.3	271	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9429.71906026662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043450	34042025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34042068_34042166_34042305_34043272_34043321_34043407
ENSMUST00000166712.9	chr19	-	3000	8	FSM	ENSMUSG00000033417.17	ENSMUST00000166712.9	1305	8	18	-1713	0	0	multi-exon	FALSE	canonical	2	21	junction_3	70.8312164549628	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATAGGTTAGTGGTTCCG	6416	False	NA	NA	False	AGTAAA	-21	NA	60569393	60515765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ENSMUST00000166735.8	chr12	+	1033	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_3	94.8235202890085	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTTATTTCTGTGA	NA	False	NA	17	True	AATAAA	-20	NA	105751015	105775968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ENSMUST00000166743.9	chr14	+	4542	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTCTTTGTGTATTT	9630	False	NA	7	True	AAGAAA	-18	NA	47535725	47560552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ENSMUST00000166743.9-0	chr14	+	1058	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	0	3484	0	-3484	multi-exon	FALSE	canonical	3	218	junction_2	12.2836838484589	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCATTCAAGTGTGCTTA	9630	False	NA	10	True	GATAAA	-10	NA	47535725	47557068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ENSMUST00000166750.9	chr8	+	2408	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_12	7.20052081449669	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAACAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	117983802	118186169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ENSMUST00000166769.8	chr5	-	1878	13	FSM	ENSMUSG00000029145.13	ENSMUST00000166769.8	1878	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_12	174.191864205983	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTGCCTTTGTATCT	NA	False	NA	-1	True	AATAAA	-23	NA	31350483	31344902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31350115_31350336
ENSMUST00000166772.9	chr12	+	3098	2	FSM	ENSMUSG00000071235.13	ENSMUST00000166772.9	3098	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGCCTCCGGGATTT	NA	False	NA	NA	False	AATAAA	-22	NA	84687792	84698229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84687912_84695250
ENSMUST00000166791.8	chr7	-	1286	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	0	1998	0	0	multi-exon	FALSE	canonical	3	356	junction_6	93.763295353542	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCCTTTTGGCTTCAC	5458	False	NA	-4	True	AATAAA	-40	NA	126795172	126792829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ENSMUST00000166793.10	chr18	+	3787	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	59	2416	0	0	multi-exon	FALSE	canonical	3	826	junction_2	183.6430655108	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695269	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000166804.2	chr10	-	1566	6	FSM	ENSMUSG00000052151.13	ENSMUST00000166804.2	1566	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	24.2602555633695	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCATGCATGTTGATTT	NA	False	NA	-5	True	TATAAA	-17	NA	79369594	79362268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366816_79369457
ENSMUST00000166811.9	chr9	-	3088	18	FSM	ENSMUSG00000039542.17	ENSMUST00000166811.9	3088	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	47.8331876507352	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	8570	False	NA	NA	False	NA	NA	NA	49710172	49416347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431516_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
ENSMUST00000166821.8	chr12	-	5420	12	FSM	ENSMUSG00000021245.16	ENSMUST00000166821.8	5420	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	26.9149256573466	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATGGGTTTGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	85317365	85281302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317338
ENSMUST00000166823.5	chr5	+	3354	7	FSM	ENSMUSG00000029152.14	ENSMUST00000166823.5	3354	7	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	115.10683443364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGTTGCTTGAAAGATT	NA	False	NA	16	True	AATAAA	-27	NA	73450135	73466708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920
ENSMUST00000166837.2	chr7	-	3673	4	FSM	ENSMUSG00000091594.3	ENSMUST00000166837.2	3673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.1455023315337	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAGCTCAGCTATCAC	NA	False	NA	NA	False	NA	NA	NA	42376441	42354892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42358310_42359840_42359902_42360100_42360228_42376373
ENSMUST00000166852.3	chr17	-	520	1	FSM	ENSMUSG00000091742.3	ENSMUST00000166852.3	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTTTTTCCAAAAAGCC	1177	False	NA	NA	False	NA	NA	NA	46751023	46750503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46750500_46751000
ENSMUST00000166860.2	chr1	+	2227	8	FSM	ENSMUSG00000000544.15	ENSMUST00000166860.2	2227	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_7	70.4990953770301	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTTTGTTCACCCAT	NA	False	NA	9	True	AATAAA	-18	NA	165958035	165994078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_165958174_165974207_165974363_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715_165992866_165992923
ENSMUST00000166897.3	chr16	+	5964	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	0	0	0	0	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGATGGGATATTAG	NA	False	NA	13	True	AATAAA	-15	NA	56942065	56977068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ENSMUST00000166897.3-1	chr16	+	3791	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	0	2173	0	-1353	multi-exon	FALSE	canonical	3	1304	junction_5	122.457278770872	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56942065	56974895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ENSMUST00000166905.8	chr9	-	4244	3	FSM	ENSMUSG00000039952.16	ENSMUST00000166905.8	4244	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	218.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGATTAAAAA	NA	False	NA	12	True	ACTAAA	-30	NA	108141117	108083153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108086861_108095211_108095610_108140978
ENSMUST00000166905.8-0	chr9	-	5373	3	FSM	ENSMUSG00000039952.16	ENSMUST00000166905.8	4244	3	-40	-1089	0	-232	multi-exon	FALSE	canonical	3	32	junction_2	218.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141157	108082064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108086861_108095211_108095610_108140978
ENSMUST00000166915.8	chr1	-	503	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_3	447.106461035848	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTTCATTCTGGTGGC	NA	False	NA	-9	True	AATAAA	-30	NA	133538029	133531608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
ENSMUST00000166930.8	chrX	-	1926	4	FSM	ENSMUSG00000031422.17	ENSMUST00000166930.8	1926	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1454.90228766975	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135641904	135633701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641694
ENSMUST00000166931.2	chr12	-	506	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATGATAGCGATCCTG	NA	False	NA	NA	False	NA	NA	NA	80690606	80681130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
ENSMUST00000166931.2-0	chr12	-	857	5	FSM	ENSMUSG00000021131.15	ENSMUST00000166931.2	506	5	-16	-335	0	0	multi-exon	FALSE	canonical	3	979	junction_4	3763.79924411491	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTTCTTATTTATTT	NA	False	NA	-1	True	AATAAA	-31	NA	80690622	80680795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80689562_80689620_80690537
ENSMUST00000166938.8	chr6	+	2413	13	FSM	ENSMUSG00000052337.16	ENSMUST00000166938.8	2413	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	399.840558500788	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGAGTACTCTATCCC	NA	False	NA	5	True	AATAAA	-12	NA	71808401	71852234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUST00000166940.3	chr12	+	2199	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	20.9752234791432	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGACTGTTCCTTCTCA	NA	False	NA	9	True	AATAAA	-22	NA	88327658	88428488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUST00000166976.3	chr8	-	2734	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGGTGTCCCTTGCTGC	NA	False	NA	NA	False	NA	NA	NA	70929618	70903054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70905670_70929499
ENSMUST00000166977.9	chr15	-	3365	16	FSM	ENSMUSG00000042632.18	ENSMUST00000166977.9	3365	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	51.9652020319581	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212376	79170427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ENSMUST00000166979.8	chr3	-	3584	21	FSM	ENSMUSG00000002227.16	ENSMUST00000166979.8	3584	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_20	290.136325716033	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725879	104702151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725438_104725672
ENSMUST00000166984.8	chr3	+	6523	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	0	0	0	0	multi-exon	FALSE	canonical	1	416	junction_13	269.035426927065	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGAGTGTTTGTGTCTT	NA	False	NA	11	True	AATAAA	-16	NA	151916058	151942463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUST00000167004.3	chr8	-	3049	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	1	2468	0	-2468	multi-exon	FALSE	canonical	3	189	junction_11	21.3085793884894	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGGACTTTGCCTTCAT	NA	False	NA	-18	True	AATAAA	-18	NA	23698361	23663748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ENSMUST00000167011.8	chr12	-	1681	3	FSM	ENSMUSG00000056459.15	ENSMUST00000167011.8	1681	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGTAGAAACTTTA	NA	False	NA	-12	True	ATTAAA	-19	NA	76416238	76395673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_76397048_76402662_76402843_76416111
ENSMUST00000167020.8	chr18	+	5208	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGCAGTTATTTCAGAAT	12	True	NA	NA	False	AATAAA	-17	NA	7869196	7929028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUST00000167020.8-1	chr18	+	3699	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	0	1509	0	0	multi-exon	FALSE	canonical	3	380	junction_6	70.7547644077099	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	12	True	NA	NA	False	AATAAA	-22	NA	7869196	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUST00000167023.8	chr11	-	1909	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_13	260.320262471546	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687221	120680027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ENSMUST00000167032.2	chr1	+	4125	22	FSM	ENSMUSG00000026288.15	ENSMUST00000167032.2	4125	22	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	52.3837661581916	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9370	False	NA	14	True	AATAAA	-15	NA	87603960	87648224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
ENSMUST00000167085.8	chr1	+	3929	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	12.6939392890685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCTGTAGAACCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	57814019	57987553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ENSMUST00000167085.8-0	chr1	+	2500	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	0	1429	0	0	multi-exon	FALSE	canonical	3	22	junction_13	12.6939392890685	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57814019	57986124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ENSMUST00000167107.10	chr17	-	2659	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	5.79271573232759	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGACTGATTTTTGCTTTT	NA	False	NA	NA	False	AATAAA	-35	NA	33613615	33599228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
ENSMUST00000167110.8	chr11	-	3547	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_3	463.171914327955	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCCCCCCTCTCCCT	NA	False	NA	-6	True	AATAAA	-33	NA	96714839	96708239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
ENSMUST00000167111.6	chr3	-	1418	8	FSM	ENSMUSG00000038975.15	ENSMUST00000167111.6	1418	8	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_5	235.209329261041	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6964	False	NA	-2	True	AATAAA	-15	NA	153617782	153612925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
ENSMUST00000167143.2	chr11	-	1195	6	FSM	ENSMUSG00000040592.12	ENSMUST00000167143.2	1195	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	7.4027022093287	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCTTCGTGATATCAT	5089	False	NA	-3	True	AATAAA	-17	NA	106205355	106202169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106202732_106202832_106202875_106203147_106203267_106203458_106203768_106204486_106204538_106205243
ENSMUST00000167159.9	chr9	+	2157	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGCCTGGAATCCAT	6862	False	NA	2	True	ACTAAA	-13	NA	107879841	107923308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
ENSMUST00000167159.9-0	chr9	+	4839	6	FSM	ENSMUSG00000032594.12	ENSMUST00000167159.9	2157	6	-9	-2673	0	0	multi-exon	FALSE	canonical	3	91	junction_5	93.84540478894	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6853	False	NA	17	True	AATAAA	-17	NA	107879832	107925981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922513_107922661
ENSMUST00000167160.8	chr4	-	1572	6	FSM	ENSMUSG00000029001.16	ENSMUST00000167160.8	1572	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.7556339129849	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCCTGCGGCTTTTGG	NA	False	NA	-3	True	AATAAA	-16	NA	148244052	148237256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241036_148241164_148242993_148243281_148243971
ENSMUST00000167161.9	chr18	+	3146	19	FSM	ENSMUSG00000003779.17	ENSMUST00000167161.9	3146	19	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	232.664995218447	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGGACAGAAAATTGATA	5855	False	NA	53	True	TATAAA	-2	NA	34757665	34765888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34757906_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUST00000167163.8	chr13	-	1654	8	FSM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	180.800939134278	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGTCTGCCTCACTGG	8372	False	NA	2	True	AATAAA	-28	NA	34120066	34101900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555_34119778_34119904
ENSMUST00000167180.8	chr17	+	1324	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	371.627232586634	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGTTTGCACACATGA	NA	False	NA	9	True	AATAAA	-17	NA	48717041	48724282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUST00000167182.8	chr6	+	2271	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_1	2299.04709728956	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	117877300	117902582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
ENSMUST00000167187.8	chr18	+	2356	11	FSM	ENSMUSG00000024576.15	ENSMUST00000167187.8	1222	11	-361	-773	0	0	multi-exon	FALSE	canonical	0	0	junction_10	819.69914602859	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	482	False	NA	27	True	ATTAAA	-20	NA	61688398	61721375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUST00000167197.8	chr7	-	1944	10	FSM	ENSMUSG00000060601.14	ENSMUST00000167197.8	1944	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	223.571073020098	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAACAAAAATAAA	NA	False	NA	-36	True	NA	NA	NA	44203347	44199075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203228
ENSMUST00000167199.3	chr19	+	1162	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	22.4499443206436	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTTATCTCCGGACCT	161	False	NA	NA	False	NA	NA	NA	11747754	11752324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ENSMUST00000167220.4	chr6	-	4853	26	FSM	ENSMUSG00000053470.14	ENSMUST00000167220.4	4853	26	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_18	109.170809285266	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGATAATCATTTCTTA	NA	False	NA	-6	True	AATAAA	-16	NA	71609670	71565957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
ENSMUST00000167246.2	chrX	-	2666	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAATAAAT	NA	False	NA	NA	False	AAAACA	-20	NA	98514341	98509373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_98511921_98514222
ENSMUST00000167256.8	chr13	+	1230	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	554	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGTACTTTGGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	100788114	100792567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_100788226_100790698_100790792_100791541
ENSMUST00000167264.8	chr8	+	1566	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_1	195.585463338633	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	5234	False	NA	9	True	AATAAA	-13	NA	34222069	34267192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUST00000167273.2	chr7	-	2809	2	FSM	ENSMUSG00000040435.13	ENSMUST00000167273.2	2809	2	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTCTTACGTGTGTTC	3983	False	NA	39	True	AATAAA	-19	NA	45175570	45172345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45172747_45173162
ENSMUST00000167288.8	chr4	-	2074	13	FSM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_12	60.4484973620795	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTGCATACTTTATTT	NA	False	NA	5	True	NA	NA	NA	129452165	129442136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873_129451984_129452080
ENSMUST00000167290.8	chr8	-	2892	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTCTATCTACTCCTAT	NA	False	NA	1	True	AATAAA	-27	NA	73324932	73319031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ENSMUST00000167290.8-1	chr8	-	2131	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	26	735	0	-735	multi-exon	FALSE	canonical	3	388	junction_4	37.7582772382427	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACTGTGTGTGTGAAAA	NA	False	NA	-40	True	GATAAA	-14	NA	73324906	73319766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ENSMUST00000167299.9	chr7	+	2022	15	FSM	ENSMUSG00000030769.16	ENSMUST00000167299.9	2022	15	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	7.1332077679838	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGTGAGCCAGGAAAC	NA	False	NA	-35	True	NA	NA	NA	122834842	122872426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869233_122872223
ENSMUST00000167303.8	chr7	+	1792	5	FSM	ENSMUSG00000015957.13	ENSMUST00000167303.8	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.21416340365355	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTTCAATCCCTCTTT	1154	False	NA	NA	False	TATAAA	-24	NA	98488051	98502958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_98488398_98495580_98495817_98496380_98496659_98499433_98499727_98502319
ENSMUST00000167309.8	chr7	-	3372	21	FSM	ENSMUSG00000030766.16	ENSMUST00000167309.8	3372	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	68.2154491299442	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122969101	122878497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_122879340_122884642_122884691_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUST00000167316.8	chr5	+	4104	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	68.241401574769	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGACTCTTTGTTTTGAG	1299	False	NA	16	True	NA	NA	NA	145168532	145184112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
ENSMUST00000167327.2	chr12	-	2664	21	FSM	ENSMUSG00000015143.16	ENSMUST00000167327.2	2664	21	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	39.4366263770115	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCCCCTGCCTCCCTCCA	NA	False	NA	NA	False	NA	NA	NA	80306865	80215095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUST00000167352.2	chr17	+	2812	3	FSM	ENSMUSG00000015575.16	ENSMUST00000167352.2	2812	3	0	0	0	0	multi-exon	FALSE	canonical	3	1484	junction_2	17.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	NA	False	NA	NA	False	ATTAAA	-45	NA	26895385	26916925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26895553_26901651_26901700_26914328
ENSMUST00000167360.8	chr17	-	4866	21	FSM	ENSMUSG00000032842.14	ENSMUST00000167360.8	4866	21	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_18	9.45832966226067	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATACTATTTCTG	7112	False	NA	6	True	GATAAA	-24	NA	46638949	46614146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ENSMUST00000167361.8	chr7	+	860	8	FSM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	185.966751472034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGTGGTTTCCTTC	NA	False	NA	32	True	AATAAA	-20	NA	30262774	30264786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUST00000167377.3	chr7	-	7444	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_37	55.7931586507513	737	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTCTTGGTT	NA	False	NA	-9	True	AATAAA	-19	NA	80453164	80361330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ENSMUST00000167379.2	chr7	+	4732	15	FSM	ENSMUSG00000005442.14	ENSMUST00000167379.2	4732	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	28.1480234561824	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGTGGGCTGCTGGCT	3503	False	NA	9	True	ATTAAA	-11	NA	24985247	24993567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24988727_24988812_24989001_24989995_24990118_24990223_24990391_24990476_24990768_24990874_24991195_24991488_24991740_24991841_24991994_24992074_24992207_24992380_24992513_24992592
ENSMUST00000167391.2	chr6	-	6033	30	FSM	ENSMUSG00000030022.15	ENSMUST00000167391.2	6033	30	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	5.68557847680721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATGCTTCTCTTGGCTT	NA	False	NA	NA	False	AATAAA	-22	NA	92878422	92749682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_92751558_92754373_92754469_92763826_92763932_92770463_92770556_92772904_92773039_92773130_92773226_92773331_92773427_92773969_92774103_92774959_92775155_92783995_92784167_92793450_92793625_92800327_92800496_92826272_92826450_92831184_92831347_92834866_92835125_92836746_92836915_92837080_92837186_92840307_92840428_92846915_92847081_92849268_92849434_92849770_92849982_92856824_92856952_92857600_92857731_92857816_92857984_92864321_92864418_92864666_92864785_92866862_92867000_92867089_92867272_92871221_92871368_92878355
ENSMUST00000167400.8	chr11	+	3151	4	FSM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	35.4432253360529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	49135017	49153849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49135167_49136019_49136445_49142376_49142502_49151397
ENSMUST00000167405.3	chr7	-	2597	2	FSM	ENSMUSG00000049580.13	ENSMUST00000167405.3	2597	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCATTTGCTGACAAATC	NA	False	NA	2	True	AATAAA	-30	NA	98010499	97999874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98002338_98010365
ENSMUST00000167430.8	chr14	-	1933	7	FSM	ENSMUSG00000079402.10	ENSMUST00000167430.8	1933	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.4535599249993	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGCTCTCATTAAATCA	NA	False	NA	NA	False	AATACA	-13	NA	18817743	18796557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_18797643_18800183_18800367_18801042_18801175_18802127_18802291_18812822_18812974_18816150_18816265_18817638
ENSMUST00000167446.8	chrX	+	2953	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_5	7.72981241687015	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	False	NA	NA	False	ATTAAA	-17	NA	163763587	163780265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ENSMUST00000167455.8	chr10	-	891	5	FSM	ENSMUSG00000061904.13	ENSMUST00000167455.8	891	5	0	0	0	0	multi-exon	FALSE	canonical	3	3785	junction_3	317.741246929007	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGATGCCAGAGTCTCTG	NA	False	NA	NA	False	NA	NA	NA	90955699	90952872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388
ENSMUST00000167466.2	chr12	-	5544	21	FSM	ENSMUSG00000020964.15	ENSMUST00000167466.2	5544	21	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_17	69.9646339231472	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91815903	91773394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799978_91799997_91808411_91808629_91809999_91810038_91815732
ENSMUST00000167466.2-0	chr12	-	3856	21	FSM	ENSMUSG00000020964.15	ENSMUST00000167466.2	5544	21	-28	1716	0	306	multi-exon	FALSE	canonical	3	89	junction_17	69.9646339231472	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTACATTTGTGTGTG	NA	False	NA	-8	True	NA	NA	NA	91815931	91775110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799978_91799997_91808411_91808629_91809999_91810038_91815732
ENSMUST00000167488.9	chr10	+	6337	4	FSM	ENSMUSG00000038214.16	ENSMUST00000167488.9	6337	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1.24721912892465	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATAGAAAAACTGGT	NA	False	NA	NA	False	TATAAA	-3	NA	43354826	43391392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_43355369_43369637_43369686_43370141_43370339_43385842
ENSMUST00000167493.9	chr7	-	1656	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_9	147.871899850621	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAAGGTCCTTGTCGTTC	7992	False	NA	NA	False	ATTAAA	-14	NA	140752770	140740240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
ENSMUST00000167496.8	chr4	+	4312	20	FSM	ENSMUSG00000028309.15	ENSMUST00000167496.8	4312	20	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	16.450883834839	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTTTGTGGTGTTC	-19	True	NA	4	True	ATTAAA	-16	NA	49632059	49656886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ENSMUST00000167498.2	chr17	-	1165	1	FSM	ENSMUSG00000091549.2	ENSMUST00000167498.2	1165	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATATTACCCCTAACACC	NA	False	NA	NA	False	NA	NA	NA	79159385	79158220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79158200_79159400
ENSMUST00000167504.3	chr9	-	634	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	209	101	0	-101	multi-exon	FALSE	canonical	3	4656	junction_3	487.196743284134	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTGTGTGTGCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	108911446	108907055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ENSMUST00000167513.3	chr13	-	1778	10	FSM	ENSMUSG00000021432.16	ENSMUST00000167513.3	1778	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	18.3127830951868	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTTTTAATAGAATTTG	NA	False	NA	NA	False	AATAAA	-24	NA	39144505	39116280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144385
ENSMUST00000167518.8	chr1	-	5058	8	FSM	ENSMUSG00000037503.13	ENSMUST00000167518.8	5058	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.281990952415	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTCGTGGGAGTGTTT	NA	False	NA	0	True	AATAAA	-25	NA	34882131	34852299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34863100_34863137_34867847_34867929_34875813_34875895_34881908
ENSMUST00000167525.3	chr8	-	1764	4	FSM	ENSMUSG00000063253.12	ENSMUST00000167525.3	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	125.913550590166	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAGCTGTTTCAGAG	7417	False	NA	-23	True	TTTAAA	-29	NA	84169136	84161144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84162670_84164181_84164263_84164613_84164686_84169050
ENSMUST00000167528.9	chr1	-	3210	18	FSM	ENSMUSG00000060985.16	ENSMUST00000167528.9	3210	18	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_17	3.94424814452711	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTGTGATCTATATT	NA	False	NA	NA	False	GATAAA	-17	NA	156130918	156082867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128361_156129314_156129477_156129936_156130173_156130880
ENSMUST00000167546.2	chr1	+	1822	10	FSM	ENSMUSG00000026641.14	ENSMUST00000167546.2	1822	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	58.785863758031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTAGAGCCACAGTTG	7105	False	NA	49	True	GATAAA	-1	NA	171239248	171246311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171239431_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUST00000167549.2	chr9	-	4470	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGGAGTCACTGCTGAC	NA	False	NA	0	True	NA	NA	NA	14292538	14265285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_14269184_14291966
ENSMUST00000167565.3	chr13	-	2970	4	FSM	ENSMUSG00000090641.3	ENSMUST00000167565.3	3968	4	0	998	0	-998	multi-exon	FALSE	canonical	1	1	junction_3	4.10960933531265	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTTTATTGGATAG	NA	False	NA	NA	False	AATAAA	-14	NA	67209234	67187657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67190297_67192821_67192918_67200350_67200478_67209126
ENSMUST00000167571.8	chr16	-	3716	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_12	261.982473319363	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTCTGCAAATATCTG	NA	False	NA	NA	False	ATTAAA	-21	NA	11072134	11037155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ENSMUST00000167619.9	chrX	+	8439	27	FSM	ENSMUSG00000034480.19	ENSMUST00000167619.9	8439	27	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_23	27.9511672650587	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTCAGTCTCTGATTC	NA	False	NA	NA	False	AATAAA	-16	NA	128650490	129366580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
ENSMUST00000167624.2	chr17	-	895	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_1	947.318613537998	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30831633	30811839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUST00000167626.8	chr17	-	2506	6	FSM	ENSMUSG00000025730.15	ENSMUST00000167626.8	2506	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	13.251415018782	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138626	26101087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338
ENSMUST00000167643.4	chr15	-	1145	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	1.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCATGTGCTCTGTAC	NA	False	NA	-7	True	ATTAAA	-14	NA	89258021	89255839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89256669_89257625_89257806_89257885
ENSMUST00000167662.8	chr17	+	2754	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGCTGTGACTCTGC	NA	False	NA	11	True	ATTAAA	-15	NA	26780462	26875905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUST00000167662.8-0	chr17	+	1146	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	29	1579	0	0	multi-exon	FALSE	canonical	3	380	junction_9	34.0783411176855	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACGTGTCTCTTTCCCTG	NA	False	NA	14	True	GATAAA	-16	NA	26780491	26874326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUST00000167671.2	chr10	-	2606	3	FSM	ENSMUSG00000046841.6	ENSMUST00000167671.2	2606	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	135.5	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTGGGCCAGGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	84369900	84362499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_84364642_84369310_84369736_84369861
ENSMUST00000167688.2	chr8	+	4087	17	FSM	ENSMUSG00000000303.13	ENSMUST00000167688.2	3203	17	0	-884	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	254.482563253359	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGGCTCACTTGATTTG	5077	False	NA	26	True	ATTAAA	-18	NA	107330010	107396878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107330175_107330918_107331040_107375632_107375857_107380138_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107392818_107392963_107395037_107395517_107395831
ENSMUST00000167692.8	chr17	-	2092	14	FSM	ENSMUSG00000023942.16	ENSMUST00000167692.8	2092	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	708.687252108979	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTCTGTGCATCCTTCCA	NA	False	NA	-3	True	AATAAA	-16	NA	45904566	45896127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45904481
ENSMUST00000167715.8	chr9	+	4961	22	FSM	ENSMUSG00000042557.15	ENSMUST00000167715.8	4961	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.9193294663047	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56982621	57035650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56982630_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUST00000167717.4	chr17	-	1413	17	FSM	ENSMUSG00000096780.8	ENSMUST00000167717.4	1413	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	321.335974633638	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCGGGCAGCAGATGG	9421	False	NA	NA	False	NA	NA	NA	6734421	6708800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716919_6717857_6717874_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317
ENSMUST00000167718.2	chr3	+	2056	12	FSM	ENSMUSG00000001416.14	ENSMUST00000167718.2	2056	12	0	0	0	0	multi-exon	FALSE	canonical	3	2432	junction_7	97.6323005756931	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGGCAAACTGGTGCT	3841	False	NA	NA	False	NA	NA	NA	88204459	88228814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88204574_88206648_88206711_88208106_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320
ENSMUST00000167731.8	chr15	+	1821	3	FSM	ENSMUSG00000022346.18	ENSMUST00000167731.8	1821	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCCTCAAACTTAAATAGT	NA	False	NA	NA	False	GGGGCT	-32	NA	61857470	61861916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_61857801_61859358_61860128_61861194
ENSMUST00000167749.2	chr17	+	2031	4	FSM	ENSMUSG00000023882.16	ENSMUST00000167749.2	822	4	0	-1209	0	0	multi-exon	FALSE	canonical	3	11	junction_1	10.1980390271856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	21643519	21655416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21643580_21647998_21648091_21650456_21650584_21653664
ENSMUST00000167759.8	chr7	-	4023	22	FSM	ENSMUSG00000032637.16	ENSMUST00000167759.8	4023	22	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	243.863600773697	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	6928	False	NA	-7	True	NA	NA	NA	126101586	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
ENSMUST00000167797.8	chr11	+	1849	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	32	1235	0	0	multi-exon	FALSE	canonical	3	19	junction_6	4.87054639873415	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATTTACTTCTAAGAC	NA	False	NA	NA	False	ATTAAA	-15	NA	51475615	51494081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUST00000167804.9	chr7	-	2637	3	FSM	ENSMUSG00000061374.15	ENSMUST00000167804.9	2637	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	221	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTTGTTTTTTGAT	3257	False	NA	-4	True	AATAAA	-14	NA	5017252	5010057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_5012205_5015676_5016022_5017107
ENSMUST00000167841.8	chr2	+	3403	15	FSM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	47.9038684475993	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTTCCAGCAACACAG	582	False	NA	NA	False	AATAAA	-24	NA	32536633	32572681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ENSMUST00000167866.2	chr9	+	2403	11	FSM	ENSMUSG00000032279.12	ENSMUST00000167866.2	2403	11	0	0	0	0	multi-exon	FALSE	canonical	3	1656	junction_1	98.4146330583008	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGCGTTTGCATTCTC	NA	False	NA	35	True	AATAAA	-15	NA	54493794	54511945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUST00000167891.2	chr12	+	3904	6	FSM	ENSMUSG00000021255.18	ENSMUST00000167891.2	1344	6	0	-2560	0	0	multi-exon	FALSE	canonical	3	623	junction_2	30.0905300717684	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCGTTCATGCGTTGTC	NA	False	NA	16	True	AATAAA	-16	NA	86516890	86568399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_86517330_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
ENSMUST00000167918.8	chr5	-	4232	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_10	456.056180749697	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAATCTGAAGTTATA	NA	False	NA	0	True	AATAAA	-33	NA	92231416	92200004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUST00000167921.2	chr18	+	3846	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	0	-1699	0	-419	multi-exon	FALSE	canonical	0	0	junction_1	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTAGTTCTTTTTG	NA	False	NA	NA	False	TATAAA	-15	NA	76192528	76281213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_76192689_76269897_76271122_76278751
ENSMUST00000167930.8	chr7	-	3376	23	FSM	ENSMUSG00000060279.15	ENSMUST00000167930.8	3376	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	144.442358888666	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578914	44549797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551140_44552173_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ENSMUST00000167943.8	chr10	-	3098	28	FSM	ENSMUSG00000052798.14	ENSMUST00000167943.8	3098	28	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_26	174.04731866881	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGAGAGTTTTCTCTT	NA	False	NA	-7	True	AATAAA	-26	NA	117628603	117586528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625960_117626371_117626464_117628508
ENSMUST00000167944.8	chrX	-	4195	5	FSM	ENSMUSG00000051323.17	ENSMUST00000167944.8	8407	5	-502	4714	-502	-4709	multi-exon	FALSE	canonical	3	12	junction_2	5.78791845139511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAAAGCTCTGGACA	NA	False	NA	NA	False	NA	NA	NA	132588515	132488337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132585866
ENSMUST00000167951.3	chr9	+	1817	1	FSM	ENSMUSG00000090470.3	ENSMUST00000167951.3	1817	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAGTCAAAAATCATAGC	NA	False	NA	6	True	AATAAA	-19	NA	98746819	98748636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98746800_98748600
ENSMUST00000167962.2	chr17	-	2010	6	FSM	ENSMUSG00000023460.14	ENSMUST00000167962.2	2010	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	22.1720544830649	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTTGCCGTGTGTTT	NA	False	NA	-4	True	AATAAA	-22	NA	66826665	66801506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
ENSMUST00000167998.2	chr3	+	1938	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	111.217603696091	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	False	NA	3	True	ATTAAA	-13	NA	89110246	89115988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUST00000168005.8	chr7	-	3004	19	FSM	ENSMUSG00000031024.14	ENSMUST00000168005.8	3004	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_17	53.6950982888281	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTGTGTTCCTTTCAC	NA	False	NA	2	True	AATAAA	-26	NA	109216354	109123117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109169213_109169319_109216264
ENSMUST00000168012.3	chr12	-	3569	3	FSM	ENSMUSG00000071456.7	ENSMUST00000168012.3	3569	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	29.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCCTGGGTTTGTTTCT	NA	False	NA	NA	False	AGTAAA	-19	NA	3477011	3453877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_3456712_3457700_3457925_3476500
ENSMUST00000168015.8	chr3	-	3460	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_20	265.434944948852	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTCTTGCGTGTGTC	NA	False	NA	-25	True	AAGAAA	-21	NA	104725621	104702151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
ENSMUST00000168019.2	chr9	-	960	1	FSM	ENSMUSG00000058922.8	ENSMUST00000168019.2	960	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTACATACAGCCAGGAA	NA	False	NA	NA	False	NA	NA	NA	123519257	123518297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_123518300_123519300
ENSMUST00000168036.8	chr10	-	2693	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGGCTTTGATTTGAA	NA	False	NA	-1	True	AATAAA	-23	NA	116417416	116321065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ENSMUST00000168036.8-0	chr10	-	2056	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	11	626	0	0	multi-exon	FALSE	canonical	3	50	junction_13	136.561565692876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTGAAGATCCTTC	NA	False	NA	-12	True	AATAAA	-19	NA	116417405	116321691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ENSMUST00000168058.7	chr5	-	9311	34	FSM	ENSMUSG00000055204.16	ENSMUST00000168058.7	9311	34	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_19	38.5954031243672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGATTCTTAACATTGG	NA	False	NA	NA	False	TTTAAA	-27	NA	90514423	90376155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ENSMUST00000168060.2	chr17	-	537	2	FSM	ENSMUSG00000019214.15	ENSMUST00000168060.2	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCTCTCCTTAGCCCC	5054	False	NA	NA	False	NA	NA	NA	25939872	25939242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25939705_25939797
ENSMUST00000168062.8	chr3	+	1943	13	FSM	ENSMUSG00000001416.14	ENSMUST00000168062.8	1943	13	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_3	126.158630303281	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCGGCAAACTGGTGCT	3876	False	NA	NA	False	NA	NA	NA	88204494	88228814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320
ENSMUST00000168076.2	chr10	-	3461	2	FSM	ENSMUSG00000046822.15	ENSMUST00000168076.2	3461	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTATTTGTTTTTTT	NA	False	NA	NA	False	TTTAAA	-3	NA	80869746	80864374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80867535_80869445
ENSMUST00000168081.9	chr1	-	4366	18	FSM	ENSMUSG00000025932.15	ENSMUST00000168081.9	4366	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	12.3526610612498	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGCTCCTTGGATGTC	NA	False	NA	-15	True	AATAAA	-17	NA	14380459	14239181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ENSMUST00000168083.2	chr19	-	603	5	FSM	ENSMUSG00000025204.11	ENSMUST00000168083.2	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	2211.89753096747	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGCTCTGGTTTCTGTGT	1995	False	NA	-20	True	AATAAA	-16	NA	44543858	44538691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543454_44543755
ENSMUST00000168086.7	chr3	+	4790	11	FSM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	235.78218762239	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	41519288	41570547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_41519439_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ENSMUST00000168093.9	chr7	+	3251	19	FSM	ENSMUSG00000041187.17	ENSMUST00000168093.9	3251	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2.9465401347058	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGGCCATGGTGATAA	NA	False	NA	NA	False	AATAAA	-33	NA	16576826	16604297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16576959_16577406_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
ENSMUST00000168098.8	chr2	-	5877	9	FSM	ENSMUSG00000063972.14	ENSMUST00000168098.8	5877	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	37.8745874564991	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATCTGTCTGTGAAG	NA	False	NA	-6	True	AATAAA	-16	NA	38674527	38613385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630620_38632818_38632974_38638847_38638904_38650198_38650442_38674404
ENSMUST00000168099.9	chr1	-	2590	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_18	163.056757519704	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAAAGTTATACTAT	NA	False	NA	NA	False	NA	NA	NA	63215891	63182893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
ENSMUST00000168106.8	chr3	+	2890	6	FSM	ENSMUSG00000015749.13	ENSMUST00000168106.8	2890	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	657.373987924682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGAGGACGGGCAGCGCTG	NA	False	NA	-16	True	NA	NA	NA	95836697	95854581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95836963_95841220_95841371_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUST00000168115.8	chr11	-	1771	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_10	57.9565354382058	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGGATAGTTGTTCT	216	False	NA	-3	True	AATAAA	-26	NA	61652914	61620475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
ENSMUST00000168120.3	chr12	+	1565	3	FSM	ENSMUSG00000072949.7	ENSMUST00000168120.3	2272	3	0	707	0	0	multi-exon	FALSE	canonical	3	130	junction_1	2	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACACAGTTGTGTAAC	2819	False	NA	1	True	AATAAA	-12	NA	84056263	84064438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84056741_84061152_84061356_84063553
ENSMUST00000168126.7	chr1	-	3446	7	FSM	ENSMUSG00000026398.15	ENSMUST00000168126.7	3446	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	7.84042232422605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAAAAAATACTGG	NA	False	NA	NA	False	NA	NA	NA	136877300	136772013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459
ENSMUST00000168129.10	chr12	-	3230	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGAGGAGACATGAGC	8230	False	NA	-29	True	AATAAA	-20	NA	28800471	28740626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ENSMUST00000168129.10-0	chr12	-	2846	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	0	384	0	-383	multi-exon	FALSE	canonical	3	62	junction_11	21.4240924087157	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTTCATTGTCTTCCT	8230	False	NA	-4	True	NA	NA	NA	28800471	28741010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ENSMUST00000168158.3	chr7	-	1754	4	FSM	ENSMUSG00000095339.3	ENSMUST00000168158.3	1754	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	2.62466929133727	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTAATTAGGT	NA	False	NA	NA	False	NA	NA	NA	10638977	10634666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_10635707_10635790_10635951_10637767_10638240_10638895
ENSMUST00000168166.8	chr9	+	3944	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	0	0	0	0	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTATTGATTTTAAT	NA	False	NA	1	True	AATAAA	-11	NA	74944895	74967576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ENSMUST00000168177.8	chr9	+	5086	21	FSM	ENSMUSG00000042557.15	ENSMUST00000168177.8	5086	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_18	80.3800970390059	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56983682	57035650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ENSMUST00000168185.8	chr15	-	4235	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_21	25.6881606970994	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524158	76510437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ENSMUST00000168186.8	chr12	+	2436	21	FSM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	0	0	0	0	multi-exon	FALSE	canonical	3	846	junction_12	380.482125072913	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGTTAAAGTCTGTAA	NA	False	NA	NA	False	ATTAAA	-13	NA	105750962	105801152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ENSMUST00000168189.8	chr7	-	4552	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	0	0	0	0	multi-exon	TRUE	canonical	3	436	junction_21	38.8223134638356	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGATGGGGCATCTTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	125799673	125700886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ENSMUST00000168194.3	chr7	+	1076	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	28.032837887021	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	19	True	AATAAA	-16	NA	139616324	139620515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUST00000168206.8	chr14	-	4990	17	FSM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_8	44.8093182273509	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	8497	False	NA	-4	True	AATAAA	-17	NA	30913487	30892886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341
ENSMUST00000168218.8	chr11	-	1511	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTCTCTTTTCTGCC	7583	False	NA	-5	True	ATTAAA	-17	NA	60769864	60755277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60756175_60766585_60766874_60769538
ENSMUST00000168223.2	chr3	+	1812	9	FSM	ENSMUSG00000038712.17	ENSMUST00000168223.2	1812	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	55.5067563455117	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	False	NA	12	True	AATAAA	-13	NA	95195258	95203474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
ENSMUST00000168237.8	chr1	+	3154	22	FSM	ENSMUSG00000053333.16	ENSMUST00000168237.8	3154	22	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	26.8303649010897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTGTAGATGCCATG	NA	False	NA	15	True	AATAAA	-16	NA	86631540	86977817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86719137_86719180_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ENSMUST00000168247.2	chr7	+	2499	7	FSM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_5	14.5764269360575	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTGCCTTTCAAAGCA	NA	False	NA	NA	False	GATAAA	-26	NA	12569409	12583852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUST00000168266.8	chr2	+	2721	17	FSM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	374.603436149483	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	False	NA	20	True	AATAAA	-16	NA	84867794	84877450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUST00000168275.9	chr14	+	2657	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_12	16.6232175269033	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCTGGTTCACTTGTC	NA	False	NA	7	True	AATAAA	-21	NA	87654074	87782940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
ENSMUST00000168276.8	chr3	-	4265	28	FSM	ENSMUSG00000060671.13	ENSMUST00000168276.8	4265	28	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_27	29.2541017489138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGAGGGGCCCTTGCG	933	False	NA	NA	False	NA	NA	NA	89870815	89848155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ENSMUST00000168288.9	chr5	-	4697	21	FSM	ENSMUSG00000042589.19	ENSMUST00000168288.9	4697	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	3.31058907144937	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAAACTCCAAA	NA	False	NA	NA	False	AAAAAG	-18	NA	122062984	121998370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_121999445_122002709_122002984_122003914_122004104_122005153_122005424_122006507_122006680_122007070_122007844_122011112_122011215_122011719_122012365_122013141_122013242_122013349_122013399_122014892_122014952_122015030_122015223_122017877_122017983_122020835_122020885_122022069_122022137_122022809_122022887_122023900_122024022_122025416_122025552_122036339_122036419_122059376_122059425_122062867
ENSMUST00000168292.2	chr2	-	1484	13	FSM	ENSMUSG00000090625.2	ENSMUST00000168292.2	1484	13	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTGCCGAGGCAGCC	NA	False	NA	NA	False	NA	NA	NA	174188505	174172111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_174172228_174176004_174176080_174176083_174176091_174178550_174178581_174183441_174183501_174183602_174183721_174184990_174185091_174186867_174186920_174187017_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUST00000168321.8	chr3	+	3553	18	FSM	ENSMUSG00000038777.20	ENSMUST00000168321.8	3553	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	22.4605767657582	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGGGGCCCAGGAGAGCA	NA	False	NA	NA	False	NA	NA	NA	95071616	95081173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ENSMUST00000168345.6	chr3	+	1295	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	73.5090697351921	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	80	False	NA	2	True	AATAAA	-22	NA	137624286	137634526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ENSMUST00000168386.9	chr8	-	4616	7	FSM	ENSMUSG00000064125.15	ENSMUST00000168386.9	4616	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTTGTCAAGGTATT	8588	False	NA	0	True	NA	NA	NA	4267312	4259542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4261037_4262885_4265082_4265165_4265279_4265968_4266072_4266181_4266556_4266867_4266980_4267088
ENSMUST00000168409.2	chr14	+	582	2	FSM	ENSMUSG00000004561.15	ENSMUST00000168409.2	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAAGGTAGGTTGGGCCA	NA	False	NA	NA	False	NA	NA	NA	52122410	52123119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52122481_52122607
ENSMUST00000168419.3	chr18	-	2152	11	FSM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_9	38.6638073655454	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTGCCGTGGTCTGACT	NA	False	NA	-2	True	AATAAA	-21	NA	84700184	84685593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962
ENSMUST00000168423.9	chr18	+	8089	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGAGTTGAGTATGGAA	NA	False	NA	10	True	AATAAA	-13	NA	76374650	76444034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUST00000168423.9-0	chr18	+	2533	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	320	5236	-146	433	multi-exon	FALSE	canonical	3	248	junction_5	13.3850663054017	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGACCTTTTGCCTCATTT	NA	False	NA	15	True	AATAAA	-20	NA	76374970	76438798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUST00000168428.8	chr8	+	1625	5	FSM	ENSMUSG00000033545.15	ENSMUST00000168428.8	4451	5	-131	2957	-131	100	multi-exon	FALSE	canonical	3	40	junction_4	33.169074451965	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	False	NA	13	True	TATAAA	-4	NA	112263140	112349705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349430
ENSMUST00000168434.8	chr11	-	2807	14	FSM	ENSMUSG00000020530.15	ENSMUST00000168434.8	3056	14	28	221	0	-221	multi-exon	FALSE	canonical	3	67	junction_13	138.817874810357	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	-6	True	AATAAA	-20	NA	84761615	84723407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ENSMUST00000168435.7	chr7	-	3982	10	FSM	ENSMUSG00000035713.16	ENSMUST00000168435.7	3982	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.91162783712058	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTGTGGCGTCTGCT	NA	False	NA	26	True	AATAAA	-42	NA	96975171	96958586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498
ENSMUST00000168445.2	chr19	+	2755	7	FSM	ENSMUSG00000034445.9	ENSMUST00000168445.2	1474	7	0	-1281	0	0	multi-exon	FALSE	canonical	3	16	junction_1	29.6516816086748	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554817	10567193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUST00000168457.3	chr7	+	1227	2	FSM	ENSMUSG00000047751.10	ENSMUST00000168457.3	1227	2	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_1	0	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGAATGAATTCGGAC	NA	False	NA	NA	False	AATAAA	-20	NA	139523701	139525025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139524343_139524439
ENSMUST00000168460.8	chr5	+	1107	8	FSM	ENSMUSG00000029130.13	ENSMUST00000168460.8	1107	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	7.15997947779524	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGTCCAGGAAGTTAA	NA	False	NA	NA	False	AAGAAA	-16	NA	29403003	29430289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ENSMUST00000168461.8	chr4	+	2532	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	17.2005632175228	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTCACTGTCCTTGG	NA	False	NA	16	True	AATAAA	-19	NA	128952063	128978319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ENSMUST00000168463.8	chr12	-	431	4	FSM	ENSMUSG00000091803.8	ENSMUST00000168463.8	431	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	143.25501736414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGCTTTTCAGTCT	995	False	NA	-6	True	ATTAAA	-14	NA	81531887	81518866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81518946_81521360_81521424_81527704_81527777_81531670
ENSMUST00000168465.9	chr10	-	1748	14	FSM	ENSMUSG00000001120.16	ENSMUST00000168465.9	1748	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	17.9674261475277	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTCTGACTTCTCTCT	NA	False	NA	-4	True	AATAAA	-17	NA	76661703	76597691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693
ENSMUST00000168472.3	chr14	+	438	1	FSM	ENSMUSG00000096681.2	ENSMUST00000168472.3	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATGCTGGGTTAA	7934	False	NA	NA	False	NA	NA	NA	53451186	53451624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_53451200_53451600
ENSMUST00000168479.3	chr14	+	7511	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	7.49965985623239	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAATGTTTAATTTTTTTT	NA	False	NA	15	True	AATAAA	-15	NA	56091473	56112193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ENSMUST00000168483.9	chr4	+	4244	5	FSM	ENSMUSG00000066007.16	ENSMUST00000168483.9	4244	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	207.21064161862	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGACTTGGCTGT	NA	False	NA	NA	False	AATAAA	-13	NA	146093393	146135319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_146093548_146094927_146095022_146126781_146126867_146129876_146130004_146131535
ENSMUST00000168501.8	chrX	+	6359	22	FSM	ENSMUSG00000041229.16	ENSMUST00000168501.8	6359	22	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_1	20.027645292538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTTGCTTGACATTA	NA	False	NA	4	True	GATAAA	-17	NA	150303667	150416853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_150304434_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ENSMUST00000168502.8	chr9	+	4899	21	FSM	ENSMUSG00000042557.15	ENSMUST00000168502.8	4899	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_18	83.2564712199598	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAAGTCCCTTGTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	56988441	57035650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ENSMUST00000168503.8	chr4	-	1240	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	226.118552976088	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTCATCCTGTTTG	NA	False	NA	54	True	NA	NA	NA	148236592	148230172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
ENSMUST00000168520.3	chr10	-	1043	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	12.3515181253156	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTATTTTTTGGCTCTT	NA	False	NA	0	True	AATAAA	-25	NA	126737217	126723117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ENSMUST00000168527.8	chr1	+	8206	22	FSM	ENSMUSG00000056268.16	ENSMUST00000168527.8	8206	22	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_7	13.1823079402048	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891446	139103781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ENSMUST00000168529.9	chr9	+	2644	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	173.734612428139	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGGACTAGGTGTGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	86904066	86959827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUST00000168536.9	chr19	-	1895	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	0	1833	0	346	multi-exon	FALSE	canonical	3	118	junction_5	15.8666589126981	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTTCAGTTTTGTGTAT	7192	False	NA	-25	True	TTTAAA	-15	NA	46950747	46877100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ENSMUST00000168574.9	chr1	-	2664	3	FSM	ENSMUSG00000045658.17	ENSMUST00000168574.9	2664	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTATTTATTTTTTT	440	False	NA	NA	False	AATAAA	-19	NA	84262366	84014016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84016229_84136952_84137100_84262061
ENSMUST00000168578.3	chr7	-	666	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	94	615	94	0	multi-exon	FALSE	canonical	3	322	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGCTTGCCTGTCTGGT	256	False	NA	-6	True	GATAAA	-16	NA	4792561	4788170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4788279_4792003
ENSMUST00000168579.8	chr11	+	2242	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	0	2093	0	0	multi-exon	FALSE	canonical	3	280	junction_1	37.4197808652055	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTCTGGCCCTCATTAG	NA	False	NA	22	True	NA	NA	NA	120839906	120849601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ENSMUST00000168584.9	chr14	+	1498	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	28.2055944017416	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3526	False	NA	8	True	AATAAA	-19	NA	30723356	30733947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUST00000168587.3	chr14	-	519	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	193.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAATAAAAATAATTAAAAG	NA	False	NA	-23	True	NA	NA	NA	101877893	101871531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_101871829_101874389_101874543_101877824
ENSMUST00000168587.3-0	chr14	-	1634	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	0	-1115	0	0	multi-exon	FALSE	canonical	3	50	junction_2	193.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTGTGGTGAGCTGACA	NA	False	NA	0	True	NA	NA	NA	101877893	101870416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_101871829_101874389_101874543_101877824
ENSMUST00000168621.3	chr2	-	7634	24	FSM	ENSMUSG00000025314.17	ENSMUST00000168621.3	7634	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.3387863591537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCTTCGATTGATTCA	NA	False	NA	NA	False	TATAAA	-15	NA	90410991	90263232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90280316_90280326_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90305314_90305334_90410499
ENSMUST00000168631.8	chr2	+	4484	21	FSM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	23.7412615503052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTTCTTGCAGTTC	NA	False	NA	20	True	AATAAA	-20	NA	58991193	59185548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_58991473_59045021_59045159_59096731_59096845_59119561_59119597_59135409_59135542_59135648_59135837_59138351_59138902_59140445_59140635_59142037_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ENSMUST00000168651.6	chr5	-	4170	31	FSM	ENSMUSG00000038095.16	ENSMUST00000168651.6	4170	31	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_29	113.71524377438	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGCAGCGGCGTGCAC	4500	False	NA	NA	False	NA	NA	NA	124552590	124512594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461
ENSMUST00000168657.8	chr8	-	2018	8	FSM	ENSMUSG00000000759.15	ENSMUST00000168657.8	2018	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_7	6.31809839642742	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12687982	12664278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666
ENSMUST00000168665.3	chr9	-	595	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTCTAGAGTGTGT	NA	False	NA	-11	True	AATAAA	-15	NA	63306523	63301728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_63301958_63306157
ENSMUST00000168678.8	chr9	+	5206	22	FSM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	78.0412705515297	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACATAAGTCCCTTGTCC	NA	False	NA	NA	False	AATAAA	-22	NA	56983659	57035648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56983915_56988378_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUST00000168697.4	chr10	-	495	1	FSM	ENSMUSG00000069682.7	ENSMUST00000168697.4	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	216	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAGCAACAAGAAAATA	NA	False	NA	-58	True	NA	NA	NA	29575286	29574791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29574800_29575300
ENSMUST00000168704.8	chr6	-	6253	9	FSM	ENSMUSG00000003153.11	ENSMUST00000168704.8	6253	9	0	0	0	0	multi-exon	FALSE	canonical	3	8407	junction_1	741.479591340854	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8913	False	NA	-21	True	AATAAA	-12	NA	122719481	122704784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122716953_122717346_122717440_122719334
ENSMUST00000168729.8	chr14	-	2852	15	FSM	ENSMUSG00000022218.17	ENSMUST00000168729.8	2852	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	53.0521499304684	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGGCCAAGAAGTATGGA	398	False	NA	2	True	AATAAA	-25	NA	55950949	55937465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950744
ENSMUST00000168747.3	chr7	+	5419	21	FSM	ENSMUSG00000025324.9	ENSMUST00000168747.3	5419	21	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.04474968323134	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGAGTGTCTGGTGCCA	NA	False	NA	NA	False	AATAAA	-16	NA	58307993	58479168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474047_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
ENSMUST00000168769.3	chr10	+	927	1	FSM	ENSMUSG00000091101.3	ENSMUST00000168769.3	927	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGGGACCCAGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	100176697	100177624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_100176700_100177600
ENSMUST00000168774.8	chr16	-	3773	13	FSM	ENSMUSG00000013089.16	ENSMUST00000168774.8	3773	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	460.814677138941	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	6495	False	NA	-20	True	AATAAA	-15	NA	22255264	22200065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22240568_22240623_22254626_22254678_22254769_22254818_22254950_22255039_22255187
ENSMUST00000168776.8	chr1	+	3267	13	FSM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	258.994798317564	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406782	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000168779.3	chr13	+	5051	20	FSM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	16.3230883504439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTTTGATCTTTATGA	NA	False	NA	NA	False	AATAAA	-15	NA	77283658	77761903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672_77341343_77393319_77393482_77402241_77402337_77407959_77408188_77410007_77410274_77411650_77411802_77415780_77415972_77417880_77418064_77429160_77429272_77446585_77446726_77451414_77451580_77464466_77464692_77471483_77471890_77475985_77476143_77480421_77480578_77482387_77482483_77760645
ENSMUST00000168785.2	chr11	+	1915	9	FSM	ENSMUSG00000033857.13	ENSMUST00000168785.2	1915	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	12.1082358335143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAAAAGGTGCTTCT	NA	False	NA	6	True	CATAAA	-13	NA	118373214	118378599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ENSMUST00000168787.8	chr17	-	7058	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGTTTGTGCCTTCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	30795462	30434497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ENSMUST00000168787.8-0	chr17	-	4815	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	226	2017	0	0	multi-exon	FALSE	canonical	3	53	junction_4	22.2551117723547	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATACAAGTGTTTCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	30795236	30436514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ENSMUST00000168793.8	chr6	-	3407	5	FSM	ENSMUSG00000055003.15	ENSMUST00000168793.8	3407	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTGCTTCATTGGGTG	7974	False	NA	0	True	AATAAA	-18	NA	119306165	119292093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_119294472_119297381_119297973_119300609_119300739_119301161_119301370_119306064
ENSMUST00000168811.2	chr15	+	1464	11	FSM	ENSMUSG00000078954.10	ENSMUST00000168811.2	1464	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	23.8748821986623	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGGGGGTTTTGTGCTT	1022	False	NA	9	True	ATTAAA	-16	NA	84617092	84656405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_84617231_84624908_84624997_84626093_84626226_84629969_84630057_84640538_84640638_84641220_84641332_84649873_84649948_84650511_84650590_84651301_84651431_84654197_84654302_84655981
ENSMUST00000168815.8	chr15	-	612	3	FSM	ENSMUSG00000044678.12	ENSMUST00000168815.8	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	7.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTGGTTTGACTTCTG	1229	False	NA	-2	True	ATTAAA	-18	NA	74671382	74668722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_74669121_74670383_74670483_74671267
ENSMUST00000168817.2	chr1	-	1298	3	FSM	ENSMUSG00000059498.14	ENSMUST00000168817.2	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	7.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATCTCCTTTTGGTGAC	NA	False	NA	-7	True	AATAAA	-24	NA	170885623	170878742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170879422_170881507_170881763_170885259
ENSMUST00000168828.3	chr15	-	2298	8	FSM	ENSMUSG00000000552.11	ENSMUST00000168828.3	2298	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	68.2405708519799	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	6919	False	NA	-12	True	AATAAA	-24	NA	103248520	103222321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103241491_103241629_103248473
ENSMUST00000168833.9	chr14	+	2993	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	10.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTGGTCTTAAAATA	NA	False	NA	10	True	AATAAA	-18	NA	47710075	47769415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47710175_47763661_47763772_47766631
ENSMUST00000168844.9	chr9	-	3575	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	6.60699203495812	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCTCAAATTGATTCT	5087	False	NA	NA	False	NA	NA	NA	64248539	64214037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ENSMUST00000168846.3	chr15	-	1652	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_11	39.9075377622816	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9349	False	NA	-4	True	ATTAAA	-22	NA	98729402	98710677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ENSMUST00000168866.2	chr14	-	1945	7	FSM	ENSMUSG00000091418.3	ENSMUST00000168866.2	1945	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.89296944860009	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	18054325	18025933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_18027067_18029618_18029802_18037571_18037704_18038653_18038817_18039548_18039684_18052747_18052862_18054240
ENSMUST00000168882.9	chr18	+	2254	14	FSM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	369.279756365738	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTCTAATTAAAGATG	8510	False	NA	13	True	AATAAA	-26	NA	77153514	77240813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUST00000168884.8	chr7	-	1762	13	FSM	ENSMUSG00000001249.15	ENSMUST00000168884.8	1762	13	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_11	3.2945662334618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGCGTCTACAAACGGA	9120	False	NA	NA	False	AATAAA	-20	NA	30814707	30798149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802185_30802352_30802578_30802620_30802725_30802849_30802924_30803055_30808389_30808432_30808515_30808618_30814102_30814170_30814560
ENSMUST00000168887.8	chr17	-	5884	19	FSM	ENSMUSG00000024070.16	ENSMUST00000168887.8	5884	19	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_8	47.0699505726698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTATGTGAAAACCTT	NA	False	NA	1	True	AATAAA	-22	NA	79328245	79256833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270006_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ENSMUST00000168889.3	chr14	-	4582	28	FSM	ENSMUSG00000022021.15	ENSMUST00000168889.3	4582	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	42.6759570646689	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGTATGTCTCTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	87378660	86892802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066593_87072412_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ENSMUST00000168890.2	chr18	-	2185	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	6.79613860953409	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTGGCTCATTATT	NA	False	NA	-4	True	AATAAA	-20	NA	33597082	33570071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
ENSMUST00000168892.9	chr13	-	4040	4	FSM	ENSMUSG00000057842.15	ENSMUST00000168892.9	4040	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.05480466765633	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAATGTGATGTTTAAT	3613	False	NA	NA	False	NA	NA	NA	67480634	67462328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67466042_67468335_67468432_67468891_67469019_67480530
ENSMUST00000168916.8	chr2	+	1859	11	FSM	ENSMUSG00000027257.14	ENSMUST00000168916.8	1859	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	24.287651183266	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	4750	False	NA	20	True	AATAAA	-17	NA	91087157	91095024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91087272_91090212_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUST00000168937.8	chr9	-	4089	6	FSM	ENSMUSG00000042688.17	ENSMUST00000168937.8	4089	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	119.229862031288	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCACTGCTCAGTCTTTT	NA	False	NA	-46	True	AATAAA	-18	NA	75316641	75294183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75316483
ENSMUST00000168972.2	chr14	+	1573	6	FSM	ENSMUSG00000052334.12	ENSMUST00000168972.2	1573	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	33.7911230946827	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	41765951	41825776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_41766287_41818127_41818291_41819245_41819378_41820058_41820192_41820192_41820240_41825013
ENSMUST00000168974.9	chr4	-	2982	21	FSM	ENSMUSG00000003644.18	ENSMUST00000168974.9	2982	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	260.286087795718	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGCGCCCGCTCTTCCTT	NA	False	NA	-9	True	AATAAA	-14	NA	133602042	133574604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133601918
ENSMUST00000168977.8	chr12	+	4893	20	FSM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	30.3797753105983	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATTCATAGGCTGTACA	NA	False	NA	9	True	AATAAA	-19	NA	85043094	85117266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ENSMUST00000168989.9	chr18	-	2777	5	FSM	ENSMUSG00000036225.16	ENSMUST00000168989.9	2777	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	2.1650635094611	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACACCTGTATTCATATG	NA	False	NA	-3	True	AATAAA	-22	NA	15196675	15102456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15194824
ENSMUST00000169008.8	chr9	+	562	6	FSM	ENSMUSG00000032301.14	ENSMUST00000169008.8	562	6	0	0	0	0	multi-exon	FALSE	canonical	3	1724	junction_4	75.8957179292745	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTGTTCTGCTTTA	NA	False	NA	NA	False	AATAAA	-8	NA	54858088	54862316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164
ENSMUST00000169017.8	chr1	-	1324	5	FSM	ENSMUSG00000059498.14	ENSMUST00000169017.8	1324	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	75.7528877337359	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCAACGGTGGGC	NA	False	NA	-28	True	AATAAA	-3	NA	170886972	170878763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_170879422_170881507_170881763_170885259_170885515_170886154_170886176_170886837
ENSMUST00000169020.8	chr8	-	7021	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_22	36.1425178978997	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAACAAGCTTTTTC	6428	False	NA	NA	False	AAGAAA	-30	NA	111985848	111881052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ENSMUST00000169020.8-0	chr8	-	4740	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	0	2281	0	823	multi-exon	FALSE	canonical	3	407	junction_22	36.1425178978997	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCTCCTTTCTGT	6428	False	NA	-22	True	ATTAAA	-22	NA	111985848	111883333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ENSMUST00000169023.2	chr14	+	1314	4	FSM	ENSMUSG00000091477.2	ENSMUST00000169023.2	1314	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	5.8878405775519	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTGGTATCACCCTA	NA	False	NA	NA	False	AATAAA	-42	NA	43781032	43788670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_43781231_43781959_43782123_43783111_43783244_43787849
ENSMUST00000169032.8	chr1	-	2283	9	FSM	ENSMUSG00000025950.17	ENSMUST00000169032.8	2283	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	288.761904516506	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTATTATGTGTTTT	NA	False	NA	-8	True	ATTAAA	-26	NA	65225638	65197776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65225463
ENSMUST00000169036.9	chr19	+	3842	21	FSM	ENSMUSG00000041180.14	ENSMUST00000169036.9	3842	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	5.91840350094516	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGCACCCAACCAGCA	NA	False	NA	NA	False	NA	NA	NA	36532067	36597642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ENSMUST00000169061.8	chr15	+	4570	35	FSM	ENSMUSG00000022191.17	ENSMUST00000169061.8	4570	35	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	145.136545301337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTTTGCTACAGAGTA	5	True	NA	29	True	ATTAAA	-19	NA	12824900	12935376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_12825029_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ENSMUST00000169064.8	chr3	-	4064	20	FSM	ENSMUSG00000027778.16	ENSMUST00000169064.8	4064	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	27	junction_10	3.97847393451879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAATAAAAAGGTTAAAAAA	NA	False	NA	NA	False	AAGAAA	-35	NA	68911903	68799857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ENSMUST00000169064.8-0	chr3	-	2899	20	FSM	ENSMUSG00000027778.16	ENSMUST00000169064.8	4064	20	45	1120	0	0	multi-exon	FALSE	non_canonical	3	27	junction_10	3.97847393451879	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATGTTATTCTGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	68911858	68800977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ENSMUST00000169068.8	chr9	-	1364	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_5	120.179865202121	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTGGTTTTTGTCTG	8113	False	NA	0	True	AATAAA	-28	NA	106562881	106535944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
ENSMUST00000169074.2	chr12	-	6636	29	FSM	ENSMUSG00000021068.18	ENSMUST00000169074.2	6636	29	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_28	9.55188569907342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATAAAATTTAAATGT	NA	False	NA	NA	False	AAAAAG	-19	NA	70158694	70065533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
ENSMUST00000169079.8	chr3	+	5638	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATCATTTCTATGT	NA	False	NA	20	True	AATAAA	-20	NA	14598882	14633361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ENSMUST00000169079.8-0	chr3	+	3330	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	56	2252	0	-54	multi-exon	FALSE	canonical	3	53	junction_7	12.3057750168542	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAGCTATCATAATAACT	NA	False	NA	NA	False	AATAAA	-21	NA	14598938	14631109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ENSMUST00000169083.8	chr13	-	5435	26	FSM	ENSMUSG00000021709.15	ENSMUST00000169083.8	5435	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.4124965142217	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGCCCAGGGGGTCCC	NA	False	NA	NA	False	NA	NA	NA	104056803	103956114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103966695_103966840_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ENSMUST00000169088.8	chr12	+	5557	34	FSM	ENSMUSG00000002900.18	ENSMUST00000169088.8	5557	34	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	26.2601941375773	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGGGGCTGTAGAGGG	NA	False	NA	NA	False	NA	NA	NA	31315232	31379492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_31315344_31315478_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ENSMUST00000169089.8	chr12	+	5959	20	FSM	ENSMUSG00000020594.15	ENSMUST00000169089.8	3295	20	-111	-2553	-62	0	multi-exon	FALSE	canonical	3	62	junction_12	35.415538790362	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGCCTGATTACATCA	NA	False	NA	38	True	GATAAA	-22	NA	8724358	8802581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUST00000169094.8	chr5	-	2716	12	FSM	ENSMUSG00000029405.17	ENSMUST00000169094.8	2716	12	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_11	559.822935407495	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTCAGTTAAC	NA	False	NA	-9	True	AGTAAA	-17	NA	92231372	92201575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUST00000169114.3	chr13	+	2977	19	FSM	ENSMUSG00000021583.8	ENSMUST00000169114.3	5644	19	287	2380	0	-2380	multi-exon	TRUE	canonical	1	4	junction_16	2.26077666104176	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAAGATATTTTCTTAT	NA	False	NA	NA	False	ACTAAA	-19	NA	74787973	74838940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_74788013_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
ENSMUST00000169137.3	chr17	-	616	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCCTAGCAGGCTACAG	NA	False	NA	NA	False	NA	NA	NA	45912892	45912179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45912612_45912708
ENSMUST00000169137.3-0	chr17	-	846	2	FSM	ENSMUSG00000079471.5	ENSMUST00000169137.3	616	2	53	-283	53	0	multi-exon	FALSE	canonical	3	164	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912839	45911896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45912612_45912708
ENSMUST00000169172.5	chr3	+	6578	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTAGTCTCGTCTATC	NA	False	NA	83	True	ATTAAA	-12	NA	132389904	132547449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ENSMUST00000169172.5-0	chr3	+	4156	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	0	2422	0	760	multi-exon	FALSE	canonical	1	21	junction_1	16.5633812973076	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTTTTTTTTTTT	NA	False	NA	14	True	ATTAAA	-18	NA	132389904	132545027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ENSMUST00000169182.3	chr9	-	1355	1	FSM	ENSMUSG00000091639.3	ENSMUST00000169182.3	1355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7443	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTCCTTGAGCCCCTG	NA	False	NA	NA	False	NA	NA	NA	31848096	31846741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_31846700_31848100
ENSMUST00000169186.3	chr16	+	1320	2	FSM	ENSMUSG00000035790.16	ENSMUST00000169186.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATAAGTCTTACTGGC	NA	False	NA	12	True	AATAAA	-12	NA	31922695	31926873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_31922866_31925723
ENSMUST00000169214.8	chr6	-	1923	12	FSM	ENSMUSG00000029701.16	ENSMUST00000169214.8	1923	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_7	23.5017143739004	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGAGAGTACTGAATT	9923	False	NA	-79	True	NA	NA	NA	29155090	29125140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752
ENSMUST00000169237.8	chr14	-	2547	16	FSM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_12	87.1219834484959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959633	55953333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
ENSMUST00000169241.8	chr1	-	3716	10	FSM	ENSMUSG00000026466.17	ENSMUST00000169241.8	3716	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	37.0794941832934	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAATGATTTACAAGCC	NA	False	NA	NA	False	AATAAA	-34	NA	155910563	155880344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155910426
ENSMUST00000169273.2	chr18	-	6070	14	FSM	ENSMUSG00000054008.10	ENSMUST00000169273.2	6070	14	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	8.57200617946746	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTG	2526	False	NA	NA	False	AAAAAG	-43	NA	60846461	60819049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794
ENSMUST00000169282.8	chr9	-	1279	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	0	3926	0	364	multi-exon	FALSE	canonical	2	9	junction_1	3.03315017762062	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGTAGCCCTTGTCTTT	NA	False	NA	-1	True	AGTAAA	-17	NA	66742008	66726201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
ENSMUST00000169308.8	chr17	+	1026	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	48.8287824955732	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGGAATACCTGGGAG	7195	False	NA	39	True	AATAAA	-40	NA	26094474	26096143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
ENSMUST00000169309.3	chr10	+	1277	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	172.048514547568	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTCCTATTGTG	NA	False	NA	10	True	AATAAA	-18	NA	87982938	88014250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUST00000169312.2	chr8	-	2730	2	FSM	ENSMUSG00000117748.2	ENSMUST00000169312.2	2730	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCTCCATTTTGTT	NA	False	NA	-27	True	AATAAA	-17	NA	107620225	107610521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107613159_107620132
ENSMUST00000169314.9	chr13	+	3027	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	0	0	0	0	multi-exon	TRUE	canonical	3	487	junction_1	56.3576747213722	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGGTAAAATACTTGT	NA	False	NA	75	True	TATAAA	-6	NA	8935536	8942487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ENSMUST00000169353.3	chr8	-	2898	16	FSM	ENSMUSG00000031788.15	ENSMUST00000169353.3	2898	16	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_2	22.7240450233277	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATCTGAATCGTCAGT	NA	False	NA	-4	True	ATTAAA	-21	NA	95837052	95826455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757
ENSMUST00000169357.2	chr7	-	1691	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTCTTTGTACAAGTC	NA	False	NA	4	True	ATTAAA	-19	NA	51512015	51510324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_51510300_51512000
ENSMUST00000169371.9	chr4	+	5365	26	FSM	ENSMUSG00000038070.16	ENSMUST00000169371.9	5365	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.77301280198992	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGTGATGCTCATTCCT	NA	False	NA	NA	False	NA	NA	NA	84802701	85050154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_84803062_84806879_84806969_84865794_84865880_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981417_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
ENSMUST00000169385.3	chr15	-	4759	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	29.2639816641101	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGTGGTGTTTGTGA	8897	False	NA	-3	True	AATAAA	-26	NA	10714653	10569054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ENSMUST00000169390.8	chr5	+	1833	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	20.2918702932973	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	False	NA	15	True	AATAAA	-15	NA	100187843	100216619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUST00000169397.9	chr17	-	1550	8	FSM	ENSMUSG00000024327.17	ENSMUST00000169397.9	1550	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	197.419371296905	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGAGGTGACCTGTCCT	NA	False	NA	-73	True	NA	NA	NA	34250636	34247769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797_34250237_34250521
ENSMUST00000169407.9	chr5	-	3276	5	FSM	ENSMUSG00000029634.16	ENSMUST00000169407.9	3276	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	52.1488254901297	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTGTGTGCAAACTTA	2835	False	NA	NA	False	ATTAAA	-24	NA	146157711	146146005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157547
ENSMUST00000169415.3	chr17	-	3321	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	0	0	0	0	multi-exon	TRUE	canonical	3	2579	junction_4	2048.76394138027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6367775	6358268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUST00000169415.3-0	chr17	-	689	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	82	2550	0	-2550	multi-exon	FALSE	canonical	3	2579	junction_4	2048.76394138027	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367693	6360818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUST00000169418.8	chrX	-	1782	3	FSM	ENSMUSG00000031422.17	ENSMUST00000169418.8	1782	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1462	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATGTGTGGTG	NA	False	NA	NA	False	AATAAA	-23	NA	135642101	135633701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_135635251_135640553_135640644_135641958
ENSMUST00000169437.9	chr7	-	2274	5	FSM	ENSMUSG00000070436.13	ENSMUST00000169437.9	2274	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	667.492462504259	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAGCCTGTGATTTATG	NA	False	NA	NA	False	ATTAAA	-30	NA	99002321	98994582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088
ENSMUST00000169454.8	chr17	-	1300	6	FSM	ENSMUSG00000024037.14	ENSMUST00000169454.8	1300	6	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	11.534296684237	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTTTCTGGAATGTTCA	9284	False	NA	-21	True	AATAAA	-13	NA	31720267	31715099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188
ENSMUST00000169459.4	chr19	-	3265	16	FSM	ENSMUSG00000074818.14	ENSMUST00000169459.4	3265	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	4.99955553580071	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAAGCTGGATGTCCAA	NA	False	NA	NA	False	NA	NA	NA	45034156	45015928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856
ENSMUST00000169464.9	chr2	+	4851	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCCTCATGGTGTTATT	NA	False	NA	7	True	NA	NA	NA	156455624	156606283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUST00000169464.9-0	chr2	+	3443	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	0	1408	0	0	multi-exon	FALSE	canonical	2	10	junction_1	158.364996833967	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGCGTTTCTCACCC	NA	False	NA	11	True	ATTAAA	-14	NA	156455624	156604875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUST00000169465.8	chr14	-	984	5	FSM	ENSMUSG00000091700.8	ENSMUST00000169465.8	984	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.92678553567856	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGTCAGAAAACACAGCAG	NA	False	NA	NA	False	AATAAA	-3	NA	17760535	17752108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_17752421_17757500_17757685_17758360_17758493_17759447_17759611_17760342
ENSMUST00000169485.6	chr5	-	4760	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_21	17.4191708985502	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGACTATGCTCTTGATC	NA	False	NA	NA	False	AGTAAA	-16	NA	125511185	125490921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ENSMUST00000169485.6-0	chr5	-	4213	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	0	547	0	383	multi-exon	FALSE	canonical	3	122	junction_21	17.4191708985502	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	125511185	125491468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ENSMUST00000169488.10	chr17	-	3578	9	FSM	ENSMUSG00000024050.19	ENSMUST00000169488.10	3578	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	52.6413276333339	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGCCCCATCAATATC	NA	False	NA	NA	False	NA	NA	NA	32583437	32573622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
ENSMUST00000169492.8	chr9	+	3963	4	FSM	ENSMUSG00000007656.14	ENSMUST00000169492.8	3963	4	0	0	0	0	multi-exon	FALSE	canonical	3	3551	junction_1	1114.80232428096	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGTTTTGTCTTATTT	NA	False	NA	20	True	AATAAA	-30	NA	74944895	74967595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ENSMUST00000169503.4	chr12	-	2791	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	54.1091078798713	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	TTTAAA	-14	NA	51738680	51656427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ENSMUST00000169504.8	chr14	+	5280	12	FSM	ENSMUSG00000022019.17	ENSMUST00000169504.8	5280	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	9.05812269605902	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTGTTTTTATTACAA	NA	False	NA	NA	False	ATTAAA	-22	NA	87654074	87752202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ENSMUST00000169540.8	chrX	-	1563	3	FSM	ENSMUSG00000079349.10	ENSMUST00000169540.8	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	8.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTTTAGTTTCTTTTT	NA	False	NA	0	True	AATAAA	-18	NA	153844549	153836056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_153837456_153838390_153838480_153844474
ENSMUST00000169543.8	chr17	+	778	5	FSM	ENSMUSG00000044279.16	ENSMUST00000169543.8	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	66.6520817379322	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTTAGCTGTAAGCTCT	1578	False	NA	NA	False	AATAAA	-30	NA	57369282	57372917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57369374_57369594_57369767_57370636_57370699_57372089_57372234_57372608
ENSMUST00000169547.9	chr11	+	3330	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	26	3789	0	-102	multi-exon	FALSE	canonical	3	23	junction_1	7.15095061334898	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCCCTCCTCACGTATC	7315	False	NA	19	True	AATAAA	-22	NA	75422963	75464607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ENSMUST00000169548.8	chr15	+	2325	10	FSM	ENSMUSG00000068206.14	ENSMUST00000169548.8	2325	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_8	29.4081537362147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCGTGTTTCTGTG	4417	False	NA	NA	False	NA	NA	NA	79113615	79132163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79130312_79130607_79130701_79131464
ENSMUST00000169550.8	chr4	+	2660	10	FSM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	55.5417760689095	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTTGAGGTCATGATG	8271	False	NA	20	True	NA	NA	NA	156194454	156211720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ENSMUST00000169576.8	chr10	-	2955	17	FSM	ENSMUSG00000020166.16	ENSMUST00000169576.8	2955	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	182.219465463353	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417401	116321069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373354_116384937_116385011_116417357
ENSMUST00000169580.2	chr10	+	2108	4	FSM	ENSMUSG00000006498.17	ENSMUST00000169580.2	2108	4	0	0	0	0	multi-exon	FALSE	canonical	3	1564	junction_2	85.0450860818347	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTGCCTGTCATTGG	3254	False	NA	23	True	AATAAA	-13	NA	79697850	79700266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUST00000169583.8	chr14	-	1749	5	FSM	ENSMUSG00000079265.11	ENSMUST00000169583.8	1749	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.433012701892219	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGAATATAAAGCTGGGA	NA	False	NA	NA	False	AATAAA	-11	NA	44894814	44886660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_44887777_44891815_44891998_44892681_44892814_44893769_44893933_44894658
ENSMUST00000169609.2	chr9	-	1677	6	FSM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	75.9910521048367	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGCTCTTCCATAATTC	NA	False	NA	-4	True	AATAAA	-29	NA	42175496	42166028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175417
ENSMUST00000169611.4	chr17	+	3674	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_5	30.8112533554436	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTCCTGTTGTGTGTTC	NA	False	NA	NA	False	TATAAA	-23	NA	41245575	41272879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUST00000169612.3	chr7	-	1605	1	FSM	ENSMUSG00000091811.3	ENSMUST00000169612.3	1605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACAGCGTTGGTTTCTGCT	NA	False	NA	-7	True	ATTAAA	-19	NA	16007542	16005937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16005900_16007500
ENSMUST00000169613.4	chr19	-	821	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	0	0	0	0	multi-exon	FALSE	canonical	3	1999	junction_6	828.939215034626	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTCTTTGGTGCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	4087985	4085406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
ENSMUST00000169623.8	chr4	-	2474	15	FSM	ENSMUSG00000029032.13	ENSMUST00000169623.8	2474	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	9.16654297999424	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGAAGGAGCCTAGCCT	NA	False	NA	NA	False	NA	NA	NA	154386120	154363210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154386008
ENSMUST00000169627.9	chr15	+	4761	29	FSM	ENSMUSG00000037003.17	ENSMUST00000169627.9	4761	29	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	4.23180378388532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTGATACCTTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	102011368	102024836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUST00000169659.8	chr1	-	2849	15	FSM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	4.50679758695639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGGAATAATTTCCTA	3955	False	NA	NA	False	AGTAAA	-22	NA	130643515	130624407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ENSMUST00000169673.3	chr19	+	2757	10	FSM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	107.147988119351	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGTCTAGTATGTGT	NA	False	NA	NA	False	AATAAA	-16	NA	38043489	38062869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38043766_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUST00000169681.3	chr15	+	3854	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	0	0	0	0	multi-exon	FALSE	canonical	3	620	junction_1	87.2144027143242	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101982207	102005608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUST00000169687.8	chr2	+	5745	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	44.6148447828747	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTTGGCATTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	57127689	57260731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUST00000169695.2	chr11	+	3741	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_12	18.9446406216646	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	282	False	NA	14	True	AATAAA	-19	NA	98700633	98724632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ENSMUST00000169712.3	chr10	+	1991	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	12.6150263134442	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTGAGTATTTAACAT	NA	False	NA	7	True	AATAAA	-14	NA	20223515	20237050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
ENSMUST00000169736.8	chr7	+	3145	13	FSM	ENSMUSG00000062031.14	ENSMUST00000169736.8	3145	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	11.7505910016854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGAGTGTGTGATGGA	NA	False	NA	9	True	ATTAAA	-21	NA	140521478	140527571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUST00000169744.8	chr6	-	3489	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	15.2168005969771	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATCAGCAGCCAGACGC	NA	False	NA	NA	False	NA	NA	NA	119365647	119330725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
ENSMUST00000169782.3	chr8	-	5156	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_2	122.541829593001	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685757	11661582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUST00000169812.8	chr3	-	1588	8	FSM	ENSMUSG00000028007.14	ENSMUST00000169812.8	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	6.9045976991969	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGATGTGTTCATTT	NA	False	NA	NA	False	AATAAA	-20	NA	117662529	117575519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_117576026_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
ENSMUST00000169826.3	chr14	+	519	6	FSM	ENSMUSG00000025290.18	ENSMUST00000169826.3	519	6	0	0	0	0	multi-exon	FALSE	canonical	3	4464	junction_5	3607.86166031903	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTCCTACACGTCTG	NA	False	NA	4	True	AATAAA	-3	NA	24540785	24545913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ENSMUST00000169828.8	chr11	-	3530	4	FSM	ENSMUSG00000038615.18	ENSMUST00000169828.8	3530	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	612.843826399153	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCCCCCCTCTCCCT	NA	False	NA	-6	True	AATAAA	-33	NA	96714953	96708239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714901
ENSMUST00000169851.8	chr9	+	3446	4	FSM	ENSMUSG00000032479.16	ENSMUST00000169851.8	3446	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	148.8944443408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATATTTAATATGGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	109760867	109834807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109831813
ENSMUST00000169854.2	chr19	-	3583	16	FSM	ENSMUSG00000056917.14	ENSMUST00000169854.2	3583	16	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_15	19.0524422464826	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTGTGTTCA	8097	False	NA	0	True	AAAAAG	-27	NA	5713735	5701212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5713631
ENSMUST00000169860.8	chr9	-	1824	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	0	0	0	0	multi-exon	FALSE	canonical	3	3415	junction_7	1167.30044572017	2614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGCCGTGTTATCAA	NA	False	NA	NA	False	AATAAA	-24	NA	89996827	89973717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ENSMUST00000169861.9	chr19	+	3664	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	127.929668177479	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGATTTTTGCTTTTC	3358	False	NA	NA	False	ATTAAA	-20	NA	53932736	54021298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUST00000169863.9	chr13	+	4515	13	FSM	ENSMUSG00000041817.15	ENSMUST00000169863.9	6013	13	0	1498	0	0	multi-exon	FALSE	canonical	2	3	junction_1	80.3818577513332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	4360	False	NA	14	True	AATAAA	-20	NA	97203793	97266023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97203831_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
ENSMUST00000169870.8	chr15	+	2396	10	FSM	ENSMUSG00000015363.14	ENSMUST00000169870.8	2396	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	29.0546526309673	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCCGCTTTGTGAAGT	NA	False	NA	3	True	AATAAA	-13	NA	88960274	88971274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_88960345_88965182_88965248_88965555_88965657_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUST00000169888.8	chr10	+	2906	15	FSM	ENSMUSG00000025404.16	ENSMUST00000169888.8	2906	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.4484856744021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGCTGTTTGTTTCACTG	4569	False	NA	20	True	TATAAA	-36	NA	127295363	127335252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127295445_127298074_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ENSMUST00000169897.2	chr19	-	4594	3	FSM	ENSMUSG00000038843.19	ENSMUST00000169897.2	4594	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	21.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCTATGTCTGCACACAT	NA	False	NA	0	True	AATAAA	-19	NA	17316932	17303506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_17307853_17310473_17310621_17316831
ENSMUST00000169921.8	chr10	-	2120	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_15	117.305110242005	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTGAAGATCCTTC	NA	False	NA	-12	True	AATAAA	-19	NA	116417416	116321691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
ENSMUST00000169922.9	chr7	-	9029	39	FSM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	0	56	0	0	multi-exon	FALSE	canonical	2	10	junction_11	12.1879612278661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTACTTTTTTGATTC	NA	False	NA	-9	True	ATTAAA	-19	NA	73191494	73076441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_73079749_73085482_73085727_73091333_73091548_73093982_73094083_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203_73118380_73119305_73119477_73121544_73121638_73122759_73122857_73124253_73124403_73125091_73125242_73128406_73128479_73130148_73130302_73130708_73130872_73134156_73134346_73140226_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
ENSMUST00000169938.8	chr12	+	4356	21	FSM	ENSMUSG00000021111.16	ENSMUST00000169938.8	4356	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	426.918657357581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105751001	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ENSMUST00000169942.10	chr15	+	3102	10	FSM	ENSMUSG00000036218.17	ENSMUST00000169942.10	3102	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.88561808316413	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAGCACGCTACCAGT	NA	False	NA	NA	False	NA	NA	NA	92294761	92668917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_92295387_92297627_92297715_92299809_92299918_92575381_92575639_92578321_92578425_92641451_92641551_92644122_92644186_92650578_92650681_92655518_92655636_92667376
ENSMUST00000169961.3	chr9	+	2369	3	FSM	ENSMUSG00000079084.13	ENSMUST00000169961.3	2369	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTTTACTGTTTCATC	NA	False	NA	NA	False	NA	NA	NA	13246609	13254424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_13246677_13251695_13252424_13252850
ENSMUST00000169975.2	chr14	-	391	2	FSM	ENSMUSG00000090459.2	ENSMUST00000169975.2	391	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTCATTGACAAAGTTT	NA	False	NA	-13	True	ATTAAA	-17	NA	32016931	32014880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_32015223_32016882
ENSMUST00000170000.4	chr9	-	1773	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_3	15.188400179084	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGTGTCTCTTTATTTT	NA	False	NA	-4	True	ATTAAA	-12	NA	48406597	48400000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ENSMUST00000170002.8	chr12	+	4415	21	FSM	ENSMUSG00000021111.16	ENSMUST00000170002.8	2605	21	-139	-1671	0	0	multi-exon	FALSE	canonical	3	84	junction_19	453.97952597006	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750991	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105800968_105801044_105803023
ENSMUST00000170010.3	chr19	-	758	3	FSM	ENSMUSG00000024844.16	ENSMUST00000170010.3	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_2	2345.5	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTCTGTGTCA	8986	False	NA	-9	True	AATAAA	-14	NA	5416391	5414668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5415187_5415845_5415985_5416290
ENSMUST00000170017.8	chr11	-	1195	9	FSM	ENSMUSG00000017286.16	ENSMUST00000170017.8	1195	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	244.869352921104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTTTAATCCCAGCACT	NA	False	NA	NA	False	AATGAA	-27	NA	76134477	76112432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130331_76131698_76131749_76134380
ENSMUST00000170036.8	chr3	+	5127	5	FSM	ENSMUSG00000003382.19	ENSMUST00000170036.8	5127	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.2072278312968	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAGAGTACTTAAA	NA	False	NA	NA	False	ATTAAA	-10	NA	87432884	87447449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_87432967_87434564_87434624_87435176_87435415_87436530_87436647_87442817
ENSMUST00000170070.3	chr17	-	3208	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_21	77.5978060329916	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTGGGGAGTGTCAGT	5683	False	NA	NA	False	NA	NA	NA	25946384	25937899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ENSMUST00000170083.8	chr5	+	2890	15	FSM	ENSMUSG00000079109.12	ENSMUST00000170083.8	5477	15	61	2526	0	0	multi-exon	FALSE	canonical	2	18	junction_1	27.3439916170083	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCATGTCTGCAGTTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	143846842	143868260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_143846898_143848743_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ENSMUST00000170086.8	chr17	+	2953	11	FSM	ENSMUSG00000037321.18	ENSMUST00000170086.8	2953	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.91024295920343	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCCCGTTTCTTAGCT	6991	False	NA	NA	False	AATAAA	-20	NA	34406526	34416199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34407380_34408151_34408267_34408403_34408535_34409536_34409743_34410302_34410501_34411810_34411940_34412101_34412291_34412458_34412633_34412854_34413018_34413817_34413955_34415541
ENSMUST00000170089.8	chr6	+	3135	6	FSM	ENSMUSG00000015053.15	ENSMUST00000170089.8	3135	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	57.164324538999	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCCTGTTGAGTGG	NA	False	NA	14	True	AATAAA	-15	NA	88170872	88184014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_88170983_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ENSMUST00000170092.8	chr1	-	941	7	FSM	ENSMUSG00000037503.13	ENSMUST00000170092.8	941	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	164.703521516694	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGCAAATCCTGTTTT	NA	False	NA	-91	True	NA	NA	NA	34882045	34856315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_34856486_34857077_34857208_34858672_34858872_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ENSMUST00000170100.2	chr15	+	1073	5	FSM	ENSMUSG00000022248.15	ENSMUST00000170100.2	1073	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	311.961836608262	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATCCGACTTACTGTA	595	False	NA	12	True	AATAAA	-17	NA	10486694	10493760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_10486803_10488075_10488185_10490341_10490601_10492873_10492950_10493239
ENSMUST00000170103.3	chr17	+	925	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTGATTTCATTTTC	3477	False	NA	19	True	NA	NA	NA	33978965	33980844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33979562_33980515
ENSMUST00000170104.3	chr14	+	1991	6	FSM	ENSMUSG00000079396.5	ENSMUST00000170104.3	1991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.4	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTGATATTTTCT	8834	False	NA	NA	False	TATAAA	-16	NA	16182522	16210026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_16182557_16192352_16192504_16203117_16203281_16204230_16204363_16205037_16205221_16208698
ENSMUST00000170122.4	chr3	-	345	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	0	0	0	0	multi-exon	FALSE	canonical	3	13930	junction_3	2970.01597451746	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTTGTCTTGTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	90120958	90119977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
ENSMUST00000170123.2	chr14	-	1933	7	FSM	ENSMUSG00000096488.2	ENSMUST00000170123.2	1933	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.4535599249993	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGCTCTCATTAAATCA	NA	False	NA	NA	False	AATACA	-13	NA	19057159	19035972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_19037058_19039598_19039782_19040457_19040590_19041542_19041706_19052238_19052390_19055566_19055681_19057054
ENSMUST00000170127.9	chr15	+	4346	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_7	35.9990137931977	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTTTGGATTTTTTCAA	NA	False	NA	NA	False	AATAAA	-20	NA	41652336	41724443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUST00000170134.9	chr15	-	2984	17	FSM	ENSMUSG00000022391.17	ENSMUST00000170134.9	2984	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_16	270.05335121046	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGAAGCTTCTTTCATCAA	NA	False	NA	-4	True	AATAAA	-25	NA	81614102	81588448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613417_81613466_81613912
ENSMUST00000170141.3	chr8	+	1466	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	361.716463545689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTTGTGATTGTCAG	NA	False	NA	NA	False	AATAAA	-17	NA	86026317	86034907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUST00000170141.3-0	chr8	+	1025	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	234	207	0	0	multi-exon	FALSE	canonical	3	116	junction_1	361.716463545689	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026551	86034700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUST00000170142.8	chr6	-	2133	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	6.09998988058258	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGTTGGCTGTTCTAT	8766	False	NA	-2	True	ATTAAA	-16	NA	50238749	50184382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
ENSMUST00000170153.2	chr15	-	4534	5	FSM	ENSMUSG00000046761.14	ENSMUST00000170153.2	4534	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.06155281280883	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAGCCTCAGTAAATT	7422	False	NA	NA	False	AATAAA	-24	NA	75881347	75872941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75876599_75876789_75876915_75876983_75877149_75877949_75878412_75881222
ENSMUST00000170157.8	chr19	-	1997	10	FSM	ENSMUSG00000010095.14	ENSMUST00000170157.8	2813	10	111	705	-60	0	multi-exon	FALSE	canonical	3	190	junction_9	923.220423635268	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACCCCTGCCTCATGA	9140	False	NA	12	True	AATAAA	-2	NA	8700622	8684950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8700347
ENSMUST00000170188.8	chr12	-	5562	19	FSM	ENSMUSG00000021009.16	ENSMUST00000170188.8	5562	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	7.37467304150739	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGTGTTCCTGTTGCAA	NA	False	NA	1	True	ATTAAA	-16	NA	98703664	98642999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
ENSMUST00000170202.9	chr11	-	1078	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	1470	False	NA	-20	True	AATAAA	-13	NA	59082778	59074700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUST00000170202.9-0	chr11	-	938	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	140	0	0	0	multi-exon	FALSE	canonical	3	619	junction_7	90.3745042609262	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAGTGTCACAGCCCTCC	1610	False	NA	-20	True	AATAAA	-13	NA	59082638	59074700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUST00000170205.2	chr13	-	527	2	FSM	ENSMUSG00000092116.2	ENSMUST00000170205.2	527	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGAATTTAGTGTACC	8854	False	NA	NA	False	AATAAA	-30	NA	98628509	98625855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98626337_98628463
ENSMUST00000170207.8	chr14	-	1961	7	FSM	ENSMUSG00000091563.9	ENSMUST00000170207.8	1961	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.14087209644419	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	18359247	18336988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_18338138_18341636_18341820_18342497_18342630_18343579_18343743_18344474_18344610_18357666_18357781_18359162
ENSMUST00000170217.8	chr1	-	2036	18	FSM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	335.563627493931	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGGCTCTGCTACTAT	NA	False	NA	NA	False	AATAAA	-18	NA	78465496	78394611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ENSMUST00000170225.3	chr17	+	944	5	FSM	ENSMUSG00000073423.11	ENSMUST00000170225.3	944	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	178.871986347779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATAGGAGCAGGTTG	4948	False	NA	NA	False	NA	NA	NA	33848094	33850437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33848191_33848754_33849054_33849340_33849449_33849549_33849656_33850102
ENSMUST00000170241.8	chr4	+	1079	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_1	75.1631558677521	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGAAGCATCTTTAAT	8196	False	NA	20	True	AATAAA	-20	NA	44012642	44032845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUST00000170243.8	chr18	+	4108	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	61.8270437052697	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24338823	24419867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUST00000170263.9	chr8	+	2096	6	FSM	ENSMUSG00000031562.17	ENSMUST00000170263.10	2096	6	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_1	42.4480859403578	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48562992	48594700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUST00000170281.2	chr15	+	741	2	FSM	ENSMUSG00000001285.13	ENSMUST00000170281.2	741	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGGATCCCCTGGAAT	5938	False	NA	NA	False	NA	NA	NA	102240154	102241031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102240389_102240524
ENSMUST00000170285.2	chr14	-	2596	22	FSM	ENSMUSG00000040701.17	ENSMUST00000170285.2	2596	22	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_21	30.4247333446486	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGGTGTTAGCTGTGAA	NA	False	NA	-27	True	AATAAA	-11	NA	55343604	55336311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343586_55343589
ENSMUST00000170295.8	chr1	-	2286	15	FSM	ENSMUSG00000046337.18	ENSMUST00000170295.8	2286	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	44.2795502622663	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGAGTTCCTTCCATC	NA	False	NA	3	True	ATTAAA	-22	NA	36722264	36601772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36698444_36698507_36699815_36700131_36721948
ENSMUST00000170296.2	chr8	+	929	5	FSM	ENSMUSG00000003824.13	ENSMUST00000170296.2	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	678.634428466461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGCTGGTCCTTT	NA	False	NA	81	True	NA	NA	NA	85598739	85614075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85598883_85599330_85599462_85610059_85610214_85612563_85612753_85613763
ENSMUST00000170300.8	chr1	+	3942	23	FSM	ENSMUSG00000026288.15	ENSMUST00000170300.8	3942	23	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_20	86.0654661453124	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCCTCCTGACTGTGT	9370	False	NA	14	True	AATAAA	-15	NA	87603960	87648224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
ENSMUST00000170308.8	chr9	+	429	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	2500.61556865949	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATTTCTCTGACTACG	NA	False	NA	42	True	ATTAAA	-29	NA	74944958	74964120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
ENSMUST00000170335.4	chr18	-	965	1	FSM	ENSMUSG00000091957.4	ENSMUST00000170335.4	965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGACCTGCAGAGATGG	7423	False	NA	NA	False	NA	NA	NA	61393043	61392078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61392100_61393000
ENSMUST00000170338.3	chr1	-	447	1	FSM	ENSMUSG00000099471.2	ENSMUST00000170338.3	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCACACCGGAGGTTAAT	NA	False	NA	NA	False	NA	NA	NA	127210845	127210398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_127210400_127210800
ENSMUST00000170349.3	chr9	+	883	1	FSM	ENSMUSG00000091080.3	ENSMUST00000170349.3	883	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCCCTGCAAGAGAACC	NA	False	NA	NA	False	NA	NA	NA	98724555	98725438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98724600_98725400
ENSMUST00000170350.8	chr6	-	3590	24	FSM	ENSMUSG00000012535.15	ENSMUST00000170350.8	3590	24	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_23	180.197874854504	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGGAAAGCTGA	31	False	NA	NA	False	AAAAAG	-9	NA	29609810	29541569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
ENSMUST00000170356.2	chr9	-	4715	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	22.7832137753209	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	False	NA	-30	True	NA	NA	NA	24414436	24323098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ENSMUST00000170373.9	chr19	+	1828	13	FSM	ENSMUSG00000024759.15	ENSMUST00000170373.9	7540	13	238	5474	83	0	multi-exon	TRUE	canonical	2	6	junction_1	12.0355376559033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGCTTGGAAGCAGTTC	NA	False	NA	NA	False	AATAAA	-32	NA	7471642	7511565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_7471727_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ENSMUST00000170374.8	chr7	+	3489	15	FSM	ENSMUSG00000005686.18	ENSMUST00000170374.8	3489	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	9.21539306745812	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGAACTTTAGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	110367412	110411126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_110367587_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUST00000170376.8	chr10	-	1381	12	FSM	ENSMUSG00000019809.17	ENSMUST00000170376.8	1381	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	41.8661779901645	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTTATGTCCTTGCCAC	NA	False	NA	NA	False	AATAAA	-14	NA	13428886	13399585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_13399688_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ENSMUST00000170379.2	chr17	+	372	1	FSM	ENSMUSG00000057580.5	ENSMUST00000170379.2	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCCCCACCACCACCAC	4032	False	NA	NA	False	AAAAAG	-39	NA	26120829	26121201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26120800_26121200
ENSMUST00000170382.5	chr6	-	494	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	0	0	0	0	multi-exon	TRUE	canonical	3	1056	junction_2	222.021395365402	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATTTGATTTATTATG	NA	False	NA	NA	False	AATAAA	-16	NA	56681677	56678047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
ENSMUST00000170416.8	chr8	-	3067	18	FSM	ENSMUSG00000038291.17	ENSMUST00000170416.8	3067	18	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_13	6.4028540349119	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTCAAAGGTATTATATG	NA	False	NA	NA	False	AATAAA	-19	NA	46577183	46486297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098
ENSMUST00000170421.8	chr9	-	4071	4	FSM	ENSMUSG00000051243.15	ENSMUST00000170421.8	4071	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGTGAGATTTTTGGGG	9008	False	NA	0	True	AATAAA	-19	NA	58109817	58103580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58107267_58107554_58107745_58108562_58108656_58109715
ENSMUST00000170430.3	chr7	-	8044	33	FSM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_32	13.7259733261434	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGTCATTTCCTTCC	NA	False	NA	NA	False	AATAAA	-5	NA	116042684	115936499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ENSMUST00000170468.8	chr5	-	1510	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	177.715052823333	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928481	110921533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
ENSMUST00000170476.8	chr2	+	4970	24	FSM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_20	8.9921200538239	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCTCTGGTGAACCTA	NA	False	NA	NA	False	AATAAA	-13	NA	30886053	30913594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ENSMUST00000170480.8	chr14	-	1955	7	FSM	ENSMUSG00000096793.8	ENSMUST00000170480.8	1955	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.60874597374975	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCT	5449	False	NA	NA	False	AATAAA	-17	NA	18659699	18639087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_18640231_18642105_18642289_18642964_18643097_18644049_18644213_18644944_18645080_18658123_18658238_18659614
ENSMUST00000170482.2	chr18	+	2895	2	FSM	ENSMUSG00000024576.15	ENSMUST00000170482.2	2895	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTATATATCCCATG	NA	False	NA	NA	False	AATAAA	-15	NA	61715914	61719569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61717476_61718235
ENSMUST00000170491.8	chr17	-	2433	6	FSM	ENSMUSG00000024327.17	ENSMUST00000170491.8	2433	6	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_4	31.8282893036996	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250622	34247246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
ENSMUST00000170517.9	chr9	+	2820	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	33.6860505254029	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTAGGATTTTGACTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	64868186	64894260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUST00000170518.3	chr8	-	6383	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_27	8.4550992852775	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTATATAATGATTTTA	NA	False	NA	-19	True	AATAAA	-21	NA	127201804	127152067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ENSMUST00000170556.8	chr11	-	2914	8	FSM	ENSMUSG00000025140.16	ENSMUST00000170556.8	2914	8	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_1	338.819740166553	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTGGCTAGAACTGTT	NA	False	NA	NA	False	NA	NA	NA	120534496	120526537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984
ENSMUST00000170580.3	chr12	-	4789	1	FSM	ENSMUSG00000051726.7	ENSMUST00000170580.3	4789	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGCTTGTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	17226889	17222100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_17222100_17226900
ENSMUST00000170584.2	chr15	-	3220	20	FSM	ENSMUSG00000033170.15	ENSMUST00000170584.2	3220	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_19	5.62148628329208	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGGCCTCCTCCATCAG	NA	False	NA	NA	False	NA	NA	NA	78686869	78660692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580
ENSMUST00000170588.8	chr11	-	3386	22	FSM	ENSMUSG00000020439.18	ENSMUST00000170588.8	3386	22	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_21	27.3941583060523	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8137	False	NA	-6	True	GATAAA	-17	NA	3489292	3467522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487554_3487606_3489111
ENSMUST00000170629.3	chr15	+	2641	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	58.9672832668062	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTATAAAGTTTATTAAA	7137	False	NA	-13	True	ATTAAA	-18	NA	85743945	85760731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ENSMUST00000170647.2	chr6	-	1664	8	FSM	ENSMUSG00000012535.15	ENSMUST00000170647.2	1664	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	239.492916686187	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTAAAAAAAAAAAAAAAGTG	15	False	NA	NA	False	NA	NA	NA	29560093	29540980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554980_29555151_29555309_29556976_29557072_29558750_29558868_29560080
ENSMUST00000170653.9	chr3	+	4238	22	FSM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	79.8674923015028	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGGCTGGAAATGAAGCG	NA	False	NA	11	True	ATTAAA	-13	NA	88528742	88555355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000170653.9-0	chr3	+	3095	22	FSM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	24	1119	0	0	multi-exon	FALSE	canonical	3	33	junction_1	79.8674923015028	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCTGATTGTCCT	NA	False	NA	9	True	AGTAAA	-15	NA	88528766	88554236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000170662.2	chr14	-	3799	1	FSM	ENSMUSG00000061517.9	ENSMUST00000170662.2	3799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTATTTCTTGTTGAGT	NA	False	NA	NA	False	AATAAA	-25	NA	118474442	118470643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_118470600_118474400
ENSMUST00000170667.8	chr6	-	1990	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.1530201939083	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGGTGTAAATAATTAGA	NA	False	NA	-2	True	AATAAA	-18	NA	100648118	100550042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ENSMUST00000170669.4	chr3	+	429	1	FSM	ENSMUSG00000092072.4	ENSMUST00000170669.4	429	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	630	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATTATTTATTCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105941979	105942408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_105942000_105942400
ENSMUST00000170690.8	chr10	-	2195	3	FSM	ENSMUSG00000020027.19	ENSMUST00000170690.8	2195	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	245	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGTTGTAGGTGTA	NA	False	NA	2	True	AATAAA	-32	NA	95252074	95247351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95248973_95250692_95251054_95251861
ENSMUST00000170693.9	chr18	+	2480	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTCTCATCTCTCA	NA	False	NA	17	True	AATAAA	-28	NA	35904610	35940221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ENSMUST00000170693.9-0	chr18	+	1705	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	44	731	0	617	multi-exon	FALSE	canonical	3	837	junction_2	121.947734706308	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGAATAGGCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	35904654	35939490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ENSMUST00000170694.9	chr14	-	2090	8	FSM	ENSMUSG00000093979.9	ENSMUST00000170694.9	2090	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.4963553055941	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTATGCTTCTGCTT	7988	False	NA	NA	False	AATAAA	-18	NA	19635203	19613867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_19615002_19617552_19617736_19618411_19618544_19619493_19619657_19620388_19620524_19630274_19630426_19633632_19633747_19635125
ENSMUST00000170703.4	chr10	+	1060	1	FSM	ENSMUSG00000090610.4	ENSMUST00000170703.4	1060	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGAATTGGAGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	93614521	93615581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_93614500_93615600
ENSMUST00000170705.8	chr8	+	1634	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	317.681974204855	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	5025	False	NA	9	True	AATAAA	-13	NA	34221860	34267192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUST00000170715.8	chr17	+	998	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	2855.80020309545	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATGTTTTTTTTTGTCTG	6190	False	NA	1	True	AATAAA	-20	NA	24939036	24940900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ENSMUST00000170716.8	chr11	+	1461	11	FSM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_3	10.4861813831347	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCATGCTGTGTTCCTTA	7707	False	NA	10	True	AATAAA	-13	NA	70548621	70553336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUST00000170744.2	chr2	+	2776	7	FSM	ENSMUSG00000028640.12	ENSMUST00000170744.2	2776	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	218.277091992927	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172392910	172400539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172393142_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
ENSMUST00000170757.3	chr16	-	6556	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTCCGAGTGCCGTGC	NA	False	NA	2	True	AATAAA	-27	NA	97723833	97656408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ENSMUST00000170757.3-0	chr16	-	3014	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	0	3542	0	0	multi-exon	FALSE	canonical	3	55	junction_10	14.8455559863677	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTAAGTGTGTTCTATGC	NA	False	NA	-5	True	ATTAAA	-12	NA	97723833	97659950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ENSMUST00000170759.3	chr17	+	1206	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	-22	2950	0	0	multi-exon	FALSE	canonical	3	101	junction_6	15.3405779986718	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAAGTGATGTGGCATT	8830	False	NA	8	True	AATACA	-20	NA	79142995	79152787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUST00000170770.2	chr7	+	2499	3	FSM	ENSMUSG00000074165.11	ENSMUST00000170770.2	2499	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	1	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTGATTAAATCTTTG	NA	False	NA	NA	False	NA	NA	NA	41297007	41300020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_41297042_41297242_41297304_41297616
ENSMUST00000170788.9	chr3	+	1730	7	FSM	ENSMUSG00000027777.16	ENSMUST00000170788.9	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	136.891684675634	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTCCTTTTGCTCACTAA	NA	False	NA	22	True	AATAAA	-24	NA	68479577	68533797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_68479997_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUST00000170790.8	chr14	-	1755	5	FSM	ENSMUSG00000071613.12	ENSMUST00000170790.8	1755	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.27760839478607	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	19335776	19328163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_19329306_19332805_19332989_19333664_19333797_19334746_19334910_19335641
ENSMUST00000170795.3	chr10	+	6427	29	FSM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	51.5606810130608	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76304760	76351691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ENSMUST00000170801.8	chr19	-	3172	11	FSM	ENSMUSG00000025198.17	ENSMUST00000170801.8	3172	11	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_6	17.066048165876	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGTGTTCTATTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	44057965	44023382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710
ENSMUST00000170805.9	chr16	+	1520	8	FSM	ENSMUSG00000022871.14	ENSMUST00000170805.9	1520	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	163.600059877241	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGGAAATGAGACTAA	NA	False	NA	35	True	AATAAA	-41	NA	22737131	22758528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22737341_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000170810.8	chr10	-	1341	8	FSM	ENSMUSG00000061904.13	ENSMUST00000170810.8	1341	8	0	0	0	0	multi-exon	FALSE	canonical	1	85	junction_6	1787.71823557179	2477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	False	NA	-5	True	AATAAA	-15	NA	90959865	90952653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90958068_90958194_90959419_90959569_90959777
ENSMUST00000170816.2	chr12	-	102	1	FSM	ENSMUSG00000118449.2	ENSMUST00000170816.2	102	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTTCCAGGAGCTGCC	NA	False	NA	NA	False	NA	NA	NA	4642927	4642825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_4642800_4642900
ENSMUST00000170827.9	chr17	+	7338	33	FSM	ENSMUSG00000068036.17	ENSMUST00000170827.9	7338	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	100.331632715896	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTGTCCCTTGGTTG	NA	False	NA	26	True	ATTAAA	-15	NA	13980802	14126056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14081987_14081990_14082036_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ENSMUST00000170828.2	chrX	+	452	5	FSM	ENSMUSG00000079435.10	ENSMUST00000170828.2	452	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	5056.48450012457	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTCCTGTTGAGTGG	NA	False	NA	81	True	ATTAAA	-22	NA	133486438	133488811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_133486469_133486826_133486933_133487260_133487328_133488199_133488323_133488685
ENSMUST00000170836.4	chr13	+	2911	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGAGTGGTGGTTGC	NA	False	NA	7	True	ATTAAA	-18	NA	14787824	14802221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUST00000170836.4-0	chr13	+	864	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	0	2047	0	-2047	multi-exon	FALSE	canonical	3	4380	junction_5	234.832723791352	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGTTTTTAAGAGTAAA	NA	False	NA	14	True	AATAAA	-14	NA	14787824	14800174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUST00000170837.3	chr7	+	485	1	FSM	ENSMUSG00000091955.3	ENSMUST00000170837.3	485	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4737	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATGATTAAACTCCTGG	NA	False	NA	NA	False	AATAAA	-34	NA	24561637	24562122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24561600_24562100
ENSMUST00000170846.8	chr9	+	4355	13	FSM	ENSMUSG00000034858.17	ENSMUST00000170846.8	4355	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.59673940848048	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTTTATTCTTAA	NA	False	NA	NA	False	AATATA	-20	NA	74860334	74939750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_74860561_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
ENSMUST00000170857.8	chr8	+	2332	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	31	3081	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	67.0446287820338	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677313	122752916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUST00000170862.8	chr18	+	2259	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	708.334701959462	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTTGCTTAGATAA	493	False	NA	-31	True	NA	NA	NA	61688409	61721253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUST00000170883.8	chr1	-	6231	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_27	59.547263104276	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406523	93333661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ENSMUST00000170887.8	chr14	+	531	3	FSM	ENSMUSG00000004561.15	ENSMUST00000170887.8	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	18.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTAAGAAGGTAGGTTGG	NA	False	NA	NA	False	NA	NA	NA	52122374	52123115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52122481_52122607_52122762_52122844
ENSMUST00000170895.3	chr11	-	743	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170895.3	743	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	291.156245311128	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGGAGCTACCCTTTG	5681	False	NA	NA	False	NA	NA	NA	59078567	59074872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59078528
ENSMUST00000170908.8	chr2	+	1342	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	15.4495145554804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCGCCCTTACCTTTCG	7279	False	NA	25	True	ATTAAA	-23	NA	125994060	126007196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ENSMUST00000170909.2	chr8	+	1700	11	FSM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_5	61.5983766019852	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCAGGCTTTAGGATG	3026	False	NA	NA	False	NA	NA	NA	13389673	13427702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUST00000170928.8	chr11	+	2390	2	FSM	ENSMUSG00000020397.16	ENSMUST00000170928.8	2390	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCCAGGAATTTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	46327787	46333548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_46328019_46331389
ENSMUST00000170935.9	chr10	-	5302	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_22	24.7608209734668	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAATTAAAGTGTAATT	NA	False	NA	NA	False	NA	NA	NA	122911930	122831465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ENSMUST00000170935.9-0	chr10	-	7111	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	-358	-1451	0	1049	multi-exon	FALSE	canonical	3	39	junction_22	24.7608209734668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGTCAGTGTTTTCT	NA	False	NA	NA	False	AAAACA	-15	NA	122912288	122830014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ENSMUST00000170953.3	chr7	-	589	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4075.24362952695	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTGGTTCTTTCTGC	NA	False	NA	0	True	AATAAA	-20	NA	115933430	115930739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
ENSMUST00000170957.3	chr13	-	4244	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAATGTTAATTTGCTCA	NA	False	NA	-10	True	TATAAA	-1	NA	14238073	14225243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ENSMUST00000170957.3-0	chr13	-	3186	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	70	988	0	198	multi-exon	FALSE	canonical	3	192	junction_3	35.1883819210577	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14238003	14226231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ENSMUST00000170992.9	chr12	+	2785	23	FSM	ENSMUSG00000021000.18	ENSMUST00000170992.9	2785	23	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	87.8376248945031	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGTTTGGTATTAA	NA	False	NA	7	True	AATAAA	-15	NA	59178238	59236959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUST00000171001.8	chr4	+	1349	7	FSM	ENSMUSG00000066026.15	ENSMUST00000171001.8	1349	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	68.47627326308	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCGTTCACGTGTTTGG	5696	False	NA	12	True	AATAAA	-19	NA	144619396	144654215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_144619481_144620154_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
ENSMUST00000171031.8	chr17	+	2113	7	FSM	ENSMUSG00000034165.17	ENSMUST00000171031.8	2113	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	1830.80687281744	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47815975	47910608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47816192_47889633_47889699_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000171042.8	chr18	+	2205	13	FSM	ENSMUSG00000024283.16	ENSMUST00000171042.8	2205	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	207.122397388597	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTGGGGGGGGGGGTT	-11	True	NA	NA	False	AAAAAG	-8	NA	7868831	7926505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917564_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUST00000171109.9	chr18	+	3396	10	FSM	ENSMUSG00000040957.16	ENSMUST00000171109.9	3396	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	6.21428064627092	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTGTGTGAACATG	NA	False	NA	NA	False	ATTAAA	-25	NA	11972276	12078683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_11973591_12015770_12015843_12021793_12021887_12038981_12039060_12056416_12056514_12057871_12058029_12059317_12059422_12072775_12072883_12074236_12074445_12077517
ENSMUST00000171115.3	chr15	-	2743	17	FSM	ENSMUSG00000022391.17	ENSMUST00000171115.3	2743	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	273.319410214496	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81614063	81588811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81610274_81610484_81613912
ENSMUST00000171120.3	chr10	+	871	1	FSM	ENSMUSG00000091086.3	ENSMUST00000171120.3	871	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCATTAAAAGTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	110961711	110962582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_110961700_110962600
ENSMUST00000171121.9	chr17	-	1710	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_2	7.8700381193486	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTTGGCTTATTCCCA	3930	False	NA	0	True	AATAAA	-17	NA	34846409	34835635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
ENSMUST00000171140.8	chr15	-	1416	10	FSM	ENSMUSG00000022617.16	ENSMUST00000171140.8	1416	10	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_9	49.0736408087093	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1640	False	NA	NA	False	AATAAA	-23	NA	89313642	89310569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ENSMUST00000171143.2	chr3	-	5702	11	FSM	ENSMUSG00000040339.11	ENSMUST00000171143.2	5702	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.6153393661244	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTCTTAAGATTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	108934923	108878312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108882659_108886160_108886231_108886996_108887125_108887390_108887611_108888459_108888556_108892627_108892732_108895626_108895674_108899941_108900059_108904350_108904381_108910615_108910737_108934500
ENSMUST00000171155.4	chr7	+	3403	3	FSM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTTGGGTTCTGATTC	NA	False	NA	17	True	AATAAA	-18	NA	75498057	75523879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_75498222_75515084_75516890_75522445
ENSMUST00000171165.8	chr1	+	1244	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	0	4410	0	0	multi-exon	FALSE	canonical	3	68	junction_1	86.300651614781	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGCTTTAATTATTTT	337	False	NA	NA	False	NA	NA	NA	91178058	91213649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000171171.9	chr17	-	4154	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_7	39.3020355706928	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACGTTGTCTCTGTGTCTT	NA	False	NA	0	True	ATTAAA	-23	NA	31731725	31713295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ENSMUST00000171172.3	chr17	-	1272	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	3.5	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGATTTAGACTTTT	NA	False	NA	-2	True	AATAAA	-21	NA	46464479	46458312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46459211_46463704_46463968_46464368
ENSMUST00000171183.2	chr7	-	883	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	939	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1694	False	NA	-5	True	AATAAA	-24	NA	28441195	28439065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28439665_28440911
ENSMUST00000171190.2	chr5	+	2025	1	FSM	ENSMUSG00000043833.7	ENSMUST00000171190.2	2025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATCTTTTGGAGTAC	NA	False	NA	NA	False	TTTAAA	-7	NA	25305980	25308005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_25306000_25308000
ENSMUST00000171211.8	chr12	-	4334	30	FSM	ENSMUSG00000034761.16	ENSMUST00000171211.8	4334	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	36.1147596152732	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATAAAGTATTTGTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	69939877	69850532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865276_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69939426
ENSMUST00000171215.8	chr2	-	6391	19	FSM	ENSMUSG00000027288.17	ENSMUST00000171215.8	6391	19	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_17	177.853421406991	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGCAGTGTCTCACT	NA	False	NA	56	True	TTTAAA	-24	NA	120370341	120340094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775
ENSMUST00000171247.8	chr11	+	1867	11	FSM	ENSMUSG00000059552.14	ENSMUST00000171247.8	1867	11	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	535.886405873484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTTTTGAGAGGTTGA	NA	False	NA	15	True	AATAAA	-16	NA	69471184	69482698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUST00000171249.6	chr3	-	1110	8	FSM	ENSMUSG00000028100.12	ENSMUST00000171249.6	1110	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	6.53405521487387	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTTTTTTTTTAAGTG	NA	False	NA	-2	True	AATAAA	-13	NA	96615878	96613384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615126_96615307_96615492_96615643
ENSMUST00000171254.8	chr11	+	548	6	FSM	ENSMUSG00000018449.13	ENSMUST00000171254.8	548	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	115.373480488369	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCGACCTCACACTTC	NA	False	NA	NA	False	NA	NA	NA	70861332	70868513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70864959_70865725_70865867_70868483
ENSMUST00000171265.8	chr1	+	3680	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	9814	False	NA	NA	False	ATTAAA	-14	NA	9918496	9971068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUST00000171265.8-0	chr1	+	2641	17	FSM	ENSMUSG00000025915.15	ENSMUST00000171265.8	3680	17	49	990	0	0	multi-exon	FALSE	canonical	3	97	junction_4	18.6899036915657	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGTGTGAATGTGTG	9863	False	NA	NA	False	AATAAA	-11	NA	9918545	9970078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUST00000171280.3	chr7	+	571	3	FSM	ENSMUSG00000074365.14	ENSMUST00000171280.3	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_1	106.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTGCTTTAAAAGAAAAT	NA	False	NA	-11	True	AATAAA	-24	NA	15635570	15637945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_15635663_15636774_15636933_15637624
ENSMUST00000171284.3	chr17	-	2560	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	27.8948462799061	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95057447	95034512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
ENSMUST00000171300.8	chr5	+	2264	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCTGCCTATCACGGT	NA	False	NA	NA	False	AATACA	-17	NA	129875826	129892891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ENSMUST00000171300.8-0	chr5	+	1646	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	0	618	0	0	multi-exon	FALSE	canonical	3	460	junction_6	14.1371629049113	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875826	129892273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ENSMUST00000171324.3	chr13	+	5087	3	FSM	ENSMUSG00000091387.3	ENSMUST00000171324.3	5087	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAACTCCTCGGACTT	NA	False	NA	NA	False	AATAAA	-12	NA	97061196	97087414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97061457_97072387_97072505_97082704
ENSMUST00000171338.8	chr7	-	1691	9	FSM	ENSMUSG00000058239.14	ENSMUST00000171338.8	994	9	-112	-585	-66	579	multi-exon	FALSE	canonical	2	3	junction_8	43.3688756483264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTGTGTGTCCATGT	8698	False	NA	-7	True	AATAAA	-23	NA	30656294	30645419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30656120
ENSMUST00000171366.7	chr1	-	4687	8	FSM	ENSMUSG00000030768.13	ENSMUST00000171366.7	4687	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	35.7748058652158	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTCTCCGTCGTTCT	NA	False	NA	2	True	AATAAA	-34	NA	182929025	182867829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182928943
ENSMUST00000171368.8	chr3	+	878	5	FSM	ENSMUSG00000015749.13	ENSMUST00000171368.8	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	694.522497835743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTCTCATTCATCTTC	NA	False	NA	NA	False	NA	NA	NA	95836636	95852754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95836963_95844431_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUST00000171368.8-0	chr3	+	2868	5	FSM	ENSMUSG00000015749.13	ENSMUST00000171368.8	878	5	-42	-1948	0	0	multi-exon	FALSE	canonical	3	38	junction_1	694.522497835743	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTCAGTGTGTGATTG	NA	False	NA	105	True	AATAAA	-22	NA	95836594	95854702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95836963_95844431_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUST00000171385.8	chr5	-	3884	12	FSM	ENSMUSG00000029192.18	ENSMUST00000171385.8	3884	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	14.7609043598508	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCACTGTGTACTTTGG	8784	False	NA	-1	True	AATAAA	-21	NA	36687967	36647948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
ENSMUST00000171404.8	chr2	-	7127	6	FSM	ENSMUSG00000035666.15	ENSMUST00000171404.8	7127	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	103.395551161547	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTTTTTTTTATTCTT	NA	False	NA	1	True	AATAAA	-25	NA	28730372	28712310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726422_28726529_28729894
ENSMUST00000171411.8	chr4	-	953	3	FSM	ENSMUSG00000028431.12	ENSMUST00000171411.8	953	3	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	22.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGACTCAGTGGTAA	69	False	NA	-18	True	AATAAA	-18	NA	56757285	56751011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_56751720_56755303_56755380_56757116
ENSMUST00000171412.7	chr9	-	4415	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	198.863995959271	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAGATTAA	NA	False	NA	9	True	ACTAAA	-27	NA	108140935	108083156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
ENSMUST00000171415.8	chr19	-	2142	5	FSM	ENSMUSG00000025204.11	ENSMUST00000171415.8	2142	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2269.24749366392	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTCTGGATTTTGTAA	1988	False	NA	NA	False	AATAAA	-16	NA	44543865	44537010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_44538660_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ENSMUST00000171436.8	chr15	-	3693	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCACTTTGCTCAG	7107	False	NA	NA	False	AGTAAA	-19	NA	83348807	83259807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ENSMUST00000171436.8-0	chr15	-	3178	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	0	515	0	0	multi-exon	FALSE	canonical	3	507	junction_5	57.2486681067778	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	7107	False	NA	0	True	AATAAA	-27	NA	83348807	83260322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ENSMUST00000171444.8	chr9	-	4171	9	FSM	ENSMUSG00000004661.16	ENSMUST00000171444.8	4171	9	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_8	71.7791752529938	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTATGGGATCCTT	NA	False	NA	-6	True	AATAAA	-17	NA	57743991	57697638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743758
ENSMUST00000171462.8	chr9	-	3339	7	FSM	ENSMUSG00000059820.15	ENSMUST00000171462.8	3339	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	47.355921840181	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCTCTGTTACTTT	NA	False	NA	-7	True	AATAAA	-13	NA	50528764	50516543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957_50527985_50528527
ENSMUST00000171479.8	chr1	-	3342	14	FSM	ENSMUSG00000026409.15	ENSMUST00000171479.8	3342	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	7.19138208770477	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAAATTTTCAATTCAC	5158	False	NA	NA	False	AATAAA	-27	NA	130642312	130616918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202
ENSMUST00000171518.8	chr13	-	2300	4	FSM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	12.657891697365	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTTGGTCATGCCAT	NA	False	NA	0	True	NA	NA	NA	67648622	67638285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648529
ENSMUST00000171549.9	chr6	-	2226	16	FSM	ENSMUSG00000004266.16	ENSMUST00000171549.9	2226	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	37.1732281203676	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGCCCCTTGTATC	8920	False	NA	0	True	AATAAA	-28	NA	124715677	124697669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124715461
ENSMUST00000171556.8	chr1	-	5391	47	FSM	ENSMUSG00000014602.16	ENSMUST00000171556.8	5391	47	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	3.30127145123012	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTGTGCGTGTTGTGGT	NA	False	NA	NA	False	NA	NA	NA	93029569	92946001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996283_93000029_93000048_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
ENSMUST00000171561.8	chr19	-	3488	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	0	3119	0	0	multi-exon	FALSE	canonical	3	95	junction_15	35.2197703317643	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTCACGTGTACTGC	NA	False	NA	-8	True	AATAAA	-16	NA	41969596	41932643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ENSMUST00000171564.8	chr10	-	2962	22	FSM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	467.860135698655	3108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCTCCTGGTCTACCC	NA	False	NA	-7	True	AATAAA	-26	NA	127147655	127132090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127132310_127132409_127132503_127132585_127132610_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUST00000171565.8	chr15	-	3651	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	0	667	0	-418	multi-exon	FALSE	canonical	3	13	junction_14	18.4094178796253	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419135	102407877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
ENSMUST00000171572.9	chr16	+	3983	16	FSM	ENSMUSG00000003233.13	ENSMUST00000171572.9	3983	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_15	48.314893034021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTATTATTATTATT	NA	False	NA	15	True	NA	NA	NA	20335813	20352760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20350241_20351033
ENSMUST00000171581.2	chr15	+	1944	3	FSM	ENSMUSG00000068206.14	ENSMUST00000171581.2	1944	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	23	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	5508	False	NA	18	True	AATAAA	-18	NA	79130534	79133666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79130701_79131464_79132497_79132920
ENSMUST00000171597.2	chr1	+	2098	6	FSM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	29.7119504576862	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGACACACTGTAT	NA	False	NA	13	True	NA	NA	NA	58486789	58501425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUST00000171614.2	chr6	-	1522	3	FSM	ENSMUSG00000029687.17	ENSMUST00000171614.2	1522	3	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATCCAAACTGCTATGC	NA	False	NA	NA	False	NA	NA	NA	47512059	47508943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_47509000_47509835_47509918_47510675
ENSMUST00000171632.2	chr9	-	475	1	FSM	ENSMUSG00000090516.2	ENSMUST00000171632.2	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACTCTGGCCAATGCCC	NA	False	NA	NA	False	NA	NA	NA	59379516	59379041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_59379000_59379500
ENSMUST00000171637.8	chr10	+	6638	46	FSM	ENSMUSG00000035722.16	ENSMUST00000171637.8	6638	46	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	11.8630872670723	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAACTAGAATGAGAAT	7092	False	NA	-9	True	NA	NA	NA	79833409	79851387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ENSMUST00000171652.3	chr9	+	1327	2	FSM	ENSMUSG00000091956.3	ENSMUST00000171652.3	1327	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTGCAGCATTGATGT	NA	False	NA	NA	False	AATAAA	-22	NA	67666718	67668212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_67666799_67666965
ENSMUST00000171683.3	chr14	-	1892	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	37.821543276319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCTTCATAGTGTATA	NA	False	NA	NA	False	AATAAA	-29	NA	59835393	59805177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUST00000171686.9	chr13	-	1148	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	0	3232	0	0	multi-exon	FALSE	canonical	3	464	junction_5	45.6195446836425	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090342	36080686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ENSMUST00000171687.8	chr16	+	1802	9	FSM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	49	816	0	0	multi-exon	FALSE	canonical	1	87	junction_5	275.38779475496	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGGTTGCCCCTTCA	NA	False	NA	-15	True	NA	NA	NA	38383222	38411708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUST00000171691.9	chr17	-	4014	17	FSM	ENSMUSG00000043557.17	ENSMUST00000171691.9	8425	17	304	4107	304	0	multi-exon	FALSE	canonical	0	0	junction_8	2.81666358481094	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCCAGCACCTTCTTTA	NA	False	NA	-2	True	ATTAAA	-18	NA	30107378	30051029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30051374_30051886_30051996_30052195_30052327_30056965_30057101_30057410_30057564_30058522_30058547_30058778_30058957_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30068130_30068401_30068613_30068747_30069465_30069663_30071415_30071591_30076563_30076704_30106420
ENSMUST00000171696.8	chr2	+	4522	5	FSM	ENSMUSG00000017679.17	ENSMUST00000171696.8	4522	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8.69985632065266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCATTGTGGTTTTTATT	5691	False	NA	NA	False	AATAAA	-17	NA	163444233	163460932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_163444335_163449128_163449595_163453678_163453873_163455654_163455766_163457282
ENSMUST00000171702.8	chr15	-	3052	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTGGTTTTCTTGTC	NA	False	NA	0	True	AATAAA	-20	NA	99549524	99518376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ENSMUST00000171702.8-0	chr15	-	2287	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	-13	778	0	-777	multi-exon	FALSE	canonical	3	159	junction_16	174.822975218819	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGTTGCATAGCTC	NA	False	NA	-5	True	AATAAA	-18	NA	99549537	99519154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ENSMUST00000171721.8	chr19	-	2660	19	FSM	ENSMUSG00000024969.16	ENSMUST00000171721.8	2660	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	113.063799863202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	4528	False	NA	NA	False	AAGAAA	-13	NA	7318557	7254123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUST00000171721.8-0	chr19	-	4473	19	FSM	ENSMUSG00000024969.16	ENSMUST00000171721.8	2660	19	-450	-1363	0	0	multi-exon	FALSE	canonical	0	0	junction_4	113.063799863202	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	4078	False	NA	-1	True	AATAAA	-20	NA	7319007	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUST00000171737.3	chr12	+	2208	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_11	306.963561516955	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGGAATGTTTGCAAG	NA	False	NA	NA	False	AATAAA	-20	NA	17594794	17601085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ENSMUST00000171749.3	chr7	-	3449	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	40.7771610034849	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9506	False	NA	87	True	NA	NA	NA	3219029	3204497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ENSMUST00000171751.10	chr15	-	6907	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	54.7017734965571	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCGTTTTGGCTCCT	NA	False	NA	-7	True	AATAAA	-15	NA	77191128	76963189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ENSMUST00000171769.8	chr11	+	3807	14	FSM	ENSMUSG00000033857.13	ENSMUST00000171769.8	3807	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	29.6532225814911	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACGGCCCCCAGTCCCG	NA	False	NA	NA	False	NA	NA	NA	118367785	118379913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_118367931_118369708_118369780_118369915_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ENSMUST00000171770.10	chr12	+	2765	12	FSM	ENSMUSG00000021065.17	ENSMUST00000171770.10	2765	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	20.7412233753807	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCCATTAGGAAGTTTT	NA	False	NA	-94	True	AATAAA	-36	NA	77284921	77522656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_77284974_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ENSMUST00000171794.9	chr5	-	3524	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	45.8592169193566	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCACTTTTTTTTCCCCT	NA	False	NA	NA	False	AGTAAA	-21	NA	134485570	134386509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUST00000171795.9	chr17	-	2734	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	21.6455679584736	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTTTGTGTAATTTTG	NA	False	NA	-3	True	TTTAAA	-4	NA	85397652	85371957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ENSMUST00000171802.8	chr1	+	2553	15	FSM	ENSMUSG00000046101.17	ENSMUST00000171802.8	2553	15	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_12	9.43857694220254	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGGTAAATGTATGATT	NA	False	NA	NA	False	NA	NA	NA	9978862	10011179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_9978916_9981899_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602
ENSMUST00000171805.2	chr4	+	1284	1	FSM	ENSMUSG00000052912.8	ENSMUST00000171805.2	1284	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAGTAAAAATCT	NA	False	NA	NA	False	ATTAAA	-27	NA	145190773	145192057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145190800_145192100
ENSMUST00000171808.8	chr5	-	2402	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	47.2513937876549	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCCTGAGAATAAAAATGAA	NA	False	NA	NA	False	AATAAA	-22	NA	8472716	8447010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ENSMUST00000171838.2	chr15	-	2968	14	FSM	ENSMUSG00000023055.11	ENSMUST00000171838.2	2968	14	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_13	14.4115338424578	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGACCCTGTCTGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	102630566	102616019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
ENSMUST00000171847.8	chr17	-	2033	13	FSM	ENSMUSG00000023942.16	ENSMUST00000171847.8	2033	13	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_12	693.627476668052	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGCATCCTTCCAAG	NA	False	NA	-1	True	AATAAA	-18	NA	45910529	45896125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45910398
ENSMUST00000171923.8	chr9	-	4103	37	FSM	ENSMUSG00000040936.16	ENSMUST00000171923.8	4103	37	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_10	8.07583653886513	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGTGTCAAACCCTCT	NA	False	NA	-1	True	AATAAA	-16	NA	121106263	120793519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ENSMUST00000171929.8	chr1	-	11130	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAACAGGCTTTGATCC	NA	False	NA	NA	False	NA	NA	NA	189420283	189372802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ENSMUST00000171929.8-1	chr1	-	9860	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	0	1270	0	820	multi-exon	FALSE	canonical	3	128	junction_7	50.2666247525517	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATACATGTCTTTGAATGT	NA	False	NA	55	True	AGTAAA	-15	NA	189420283	189374072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ENSMUST00000171937.2	chr7	-	6251	8	FSM	ENSMUSG00000058230.13	ENSMUST00000171937.2	6251	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	35.0527299586069	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAGTAAACTCCAAGAC	NA	False	NA	NA	False	NA	NA	NA	16348862	16230176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396_16348527_16348833
ENSMUST00000171962.3	chr8	+	3925	17	FSM	ENSMUSG00000044433.17	ENSMUST00000171962.3	3925	17	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	34.0677174903163	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACGGTGTCTCCTCCCTA	6654	False	NA	26	True	AATAAA	-22	NA	3637793	3659048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ENSMUST00000171967.2	chr14	+	1239	4	FSM	ENSMUSG00000094157.8	ENSMUST00000171967.2	1239	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	27.178422814186	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTTCACTCTTAAGAAA	NA	False	NA	NA	False	AATAAA	-13	NA	42132167	42147351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_42132331_42133285_42133418_42134097_42134279_42146588
ENSMUST00000171970.3	chr13	+	3593	7	FSM	ENSMUSG00000039004.7	ENSMUST00000171970.3	3593	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.15470053837925	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACCAAATTGTACCACT	NA	False	NA	NA	False	AAAAAG	-15	NA	38529082	38684278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_38530564_38653589_38653783_38668866_38669016_38669714_38669913_38681270_38681348_38682692_38682804_38682894
ENSMUST00000171975.8	chr9	-	5176	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	-56	1851	-52	-1851	multi-exon	TRUE	canonical	3	295	junction_6	43.7741649239926	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	-8	True	AATAAA	-20	NA	59393953	59297391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ENSMUST00000171989.3	chr6	+	1458	2	FSM	ENSMUSG00000067714.14	ENSMUST00000171989.3	1458	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGACGCAGTCTAAGTGAA	8395	False	NA	NA	False	NA	NA	NA	125048239	125059435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125048362_125058099
ENSMUST00000172013.9	chr16	+	934	11	FSM	ENSMUSG00000005262.14	ENSMUST00000172013.9	934	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	128.968562060682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAAGTTAATTTCATTG	NA	False	NA	NA	False	AAAAAG	-7	NA	18631050	18646464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385
ENSMUST00000172020.8	chrX	-	2441	7	FSM	ENSMUSG00000039201.11	ENSMUST00000172020.8	2441	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	52.9863714133696	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATTTCTCTATTTC	NA	False	NA	-7	True	NA	NA	NA	8042420	8020710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949_8042089_8042295
ENSMUST00000172035.8	chr11	-	6213	28	FSM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_10	34.9266525198369	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCTTTTCTTTATCA	NA	False	NA	0	True	ATTAAA	-21	NA	58059365	58010827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ENSMUST00000172070.8	chr10	-	2153	3	FSM	ENSMUSG00000020027.19	ENSMUST00000172070.8	2153	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	233.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGTTGTAGGTGTA	NA	False	NA	2	True	AATAAA	-32	NA	95251346	95247351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95248973_95250692_95251054_95251175
ENSMUST00000172079.2	chr1	-	653	4	FSM	ENSMUSG00000090553.9	ENSMUST00000172079.2	653	4	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_3	471.411356107027	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAGTTTTTGTTAAAA	NA	False	NA	-34	True	AATAAA	-5	NA	133537785	133531633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455
ENSMUST00000172088.8	chr6	+	2812	4	FSM	ENSMUSG00000042097.18	ENSMUST00000172088.8	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	8.52447456836295	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCAATGTGTTCATTT	NA	False	NA	12	True	TTTAAA	-6	NA	117840037	117849726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117840104_117843355_117843536_117846178_117846235_117847216
ENSMUST00000172107.8	chr15	-	3346	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	0	0	0	0	multi-exon	FALSE	canonical	3	2366	junction_3	110.211442162196	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81284244	81247869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUST00000172108.8	chr11	-	2924	22	FSM	ENSMUSG00000001441.14	ENSMUST00000172108.8	2924	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	71.3065942636972	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171396	97096667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_97096918_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ENSMUST00000172109.4	chr7	+	2851	17	FSM	ENSMUSG00000078816.11	ENSMUST00000172109.4	2119	17	0	-732	0	0	multi-exon	FALSE	canonical	3	19	junction_9	8.11802585300146	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGATGTTTTCTTGTA	NA	False	NA	11	True	AATAAA	-22	NA	3352160	3379615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3377550_3377659_3378343_3378485_3378661
ENSMUST00000172122.8	chr14	-	3664	6	FSM	ENSMUSG00000022119.16	ENSMUST00000172122.8	3664	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	89.6147309319177	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGTTAATGTTTTAAAA	NA	False	NA	NA	False	AATAAA	-17	NA	105367773	105344186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_105347239_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668
ENSMUST00000172132.10	chr6	-	1607	7	FSM	ENSMUSG00000023456.17	ENSMUST00000172132.10	1607	7	0	0	0	0	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTGTCCCAGGCTGCC	NA	False	NA	-17	True	AATACA	-22	NA	124791259	124787548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUST00000172132.10-0	chr6	-	1340	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	138	123	0	-123	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGGGTTGTCATAAT	NA	False	NA	-7	True	AATAAA	-14	NA	124791121	124787677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUST00000172136.9	chr7	+	2543	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	19.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAACAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	138828402	138847077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_138828560_138834685_138836382_138846387
ENSMUST00000172142.8	chr14	-	2780	14	FSM	ENSMUSG00000021910.16	ENSMUST00000172142.8	2780	14	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	267.283529621824	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACATCTTTTTCCTTT	9296	False	NA	3	True	AATAAA	-20	NA	30928783	30905269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30906355_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUST00000172158.2	chr10	-	1400	3	FSM	ENSMUSG00000042570.15	ENSMUST00000172158.2	1400	3	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	100	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79377794	79376079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79376696_79376696_79377034_79377347
ENSMUST00000172164.10	chr16	-	2293	5	FSM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	50	938	0	0	multi-exon	FALSE	canonical	3	3	junction_4	5.33853912601566	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATGTACACTGTGGTA	NA	False	NA	NA	False	NA	NA	NA	17394535	17390819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17394503
ENSMUST00000172165.8	chr1	+	3192	12	FSM	ENSMUSG00000116048.2	ENSMUST00000172165.8	3192	12	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_1	279.729178354959	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406714	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000172175.3	chr19	+	2004	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGAACTGGTGTTGG	5428	False	NA	12	True	CATAAA	-17	NA	8779918	8782210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8780050_8780337
ENSMUST00000172177.2	chr17	-	2736	4	FSM	ENSMUSG00000002617.15	ENSMUST00000172177.2	2736	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAACATTCCATCCAATA	NA	False	NA	NA	False	TTTAAA	-30	NA	23410353	23393849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23396339_23397248_23397376_23401121_23401207_23410318
ENSMUST00000172184.2	chr13	-	1327	7	FSM	ENSMUSG00000052180.16	ENSMUST00000172184.2	1327	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	317.289431486984	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCAGAACCGAGTGTTT	NA	False	NA	-8	True	AATAAA	-18	NA	34089691	34063799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34083244_34083420_34089625
ENSMUST00000172207.8	chr16	+	3001	21	FSM	ENSMUSG00000006998.17	ENSMUST00000172207.8	3001	21	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	681.526116520857	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTCTGTCTATTTCCTGG	NA	False	NA	23	True	AATAAA	-16	NA	20470453	20482164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_20470602_20470901_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUST00000172229.8	chr17	-	1446	3	FSM	ENSMUSG00000047407.18	ENSMUST00000172229.8	1446	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	419.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAGCATTTTCTTGAAG	NA	False	NA	84	True	AATAAA	-26	NA	71156785	71151199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71152268_71153166_71153394_71156634
ENSMUST00000172239.3	chr19	-	3148	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGGCCCTTGTGTAGT	NA	False	NA	NA	False	AGTAAA	-17	NA	47003592	46876266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ENSMUST00000172239.3-0	chr19	-	2316	18	FSM	ENSMUSG00000025041.18	ENSMUST00000172239.3	3148	18	0	832	0	348	multi-exon	FALSE	canonical	3	36	junction_17	29.5968295318789	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCAGTTTTGTGTATCT	NA	False	NA	-23	True	TTTAAA	-17	NA	47003592	46877098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_47003136
ENSMUST00000172271.9	chr14	+	3775	9	FSM	ENSMUSG00000023411.13	ENSMUST00000172271.9	3775	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	5.95818764390649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGGCTCCAGAGCTC	NA	False	NA	16	True	AATAAA	-16	NA	56062493	56071398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679
ENSMUST00000172272.8	chr13	+	5676	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCAGATTATCTTT	NA	False	NA	8	True	AATAAA	-15	NA	55782839	55829069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUST00000172272.8-0	chr13	+	3544	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	0	2132	0	-2132	multi-exon	FALSE	non_canonical	0	0	junction_19	81.8265778520354	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCCTTTCAGTGGAAT	NA	False	NA	17	True	AATAAA	-26	NA	55782839	55826937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUST00000172282.8	chr10	+	3110	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_8	238.590734232364	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTGCCTGTCATTGG	1383	False	NA	23	True	AATAAA	-13	NA	79690260	79700266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUST00000172284.9	chr17	-	3633	11	FSM	ENSMUSG00000024037.14	ENSMUST00000172284.9	3633	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	141.425033144772	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACGTTGTCTCTGTGTCT	NA	False	NA	-1	True	ATTAAA	-22	NA	31731257	31713296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728794_31728887_31729551_31729621_31731140
ENSMUST00000172284.9-0	chr17	-	1860	11	FSM	ENSMUSG00000024037.14	ENSMUST00000172284.9	3633	11	-26	1799	0	0	multi-exon	FALSE	canonical	3	14	junction_8	141.425033144772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGAATGTTCAGCAG	NA	False	NA	-17	True	AATAAA	-17	NA	31731283	31715095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728794_31728887_31729551_31729621_31731140
ENSMUST00000172288.3	chr3	+	4979	19	FSM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	61.6686686361723	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	4717	False	NA	NA	False	GATAAA	-16	NA	103034871	103077054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ENSMUST00000172298.8	chr9	-	2336	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	0	0	0	0	multi-exon	TRUE	canonical	3	899	junction_3	39.0160223497988	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTGAGATTACATTCT	NA	False	NA	-2	True	AATAAA	-21	NA	64645040	64622580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ENSMUST00000172298.8-0	chr9	-	1030	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	0	1306	0	0	multi-exon	FALSE	canonical	3	899	junction_3	39.0160223497988	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTGTTTACTCTTCAT	NA	False	NA	-4	True	AATAAA	-20	NA	64645040	64623886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ENSMUST00000172302.8	chr19	+	3855	18	FSM	ENSMUSG00000024924.15	ENSMUST00000172302.8	3855	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	6.92020760934247	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATCGAGCTAGTATCTT	NA	False	NA	NA	False	NA	NA	NA	27194419	27227262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27213639_27213763_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27224409_27224491_27225256_27225427_27226504
ENSMUST00000172306.3	chr9	+	3213	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	12	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTCCTGGTGTTCAATA	NA	False	NA	38	True	AATAAA	-19	NA	106245830	106252923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106246523_106247899_106248335_106250837
ENSMUST00000172314.9	chr12	-	3142	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_10	30.1004983347452	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACCCTGACTTCATTT	NA	False	NA	NA	False	AGTAAA	-10	NA	32000534	31976252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ENSMUST00000172332.4	chr12	+	4240	1	FSM	ENSMUSG00000090946.4	ENSMUST00000172332.4	4240	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGCTTTTCTAATGAT	NA	False	NA	15	True	AATAAA	-15	NA	32428702	32432942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_32428700_32432900
ENSMUST00000172334.9	chr15	-	920	4	FSM	ENSMUSG00000053559.14	ENSMUST00000172334.9	920	4	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_3	158.779371736032	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTTGTTTGATCTGA	NA	False	NA	-94	True	NA	NA	NA	100534821	100519329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100519908_100520509_100520591_100534067_100534137_100534629
ENSMUST00000172336.2	chr8	-	747	2	FSM	ENSMUSG00000000743.10	ENSMUST00000172336.2	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCAGAGGGGTCCTGGGC	9742	False	NA	NA	False	NA	NA	NA	123939502	123936325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123936975_123939404
ENSMUST00000172361.8	chr5	-	6811	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	0	0	0	0	multi-exon	FALSE	canonical	3	2301	junction_7	859.13983145935	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGCACTGTCTTTT	NA	False	NA	1	True	ATTAAA	-19	NA	100126797	100103793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ENSMUST00000172362.3	chr19	-	4633	22	FSM	ENSMUSG00000024908.16	ENSMUST00000172362.3	4633	22	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	119.716123030186	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625716	3504932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523816_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
ENSMUST00000172387.8	chr15	-	824	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	399	0	0	0	multi-exon	FALSE	canonical	3	905	junction_4	55.6070039553372	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATGTCTCTTACTGAAA	NA	False	NA	0	True	AATAAA	-20	NA	55420745	55397489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ENSMUST00000172403.9	chr15	-	2943	17	FSM	ENSMUSG00000042632.18	ENSMUST00000172403.9	2943	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_16	62.696565894792	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTCATTGTACAGTGT	NA	False	NA	-14	True	AATAAA	-12	NA	79212453	79170431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212409
ENSMUST00000172405.8	chr11	-	2950	14	FSM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_13	140.403560365518	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTCTTCCTTCCTCA	NA	False	NA	0	True	AATAAA	-16	NA	84761564	84723186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ENSMUST00000172422.8	chr2	+	1534	14	FSM	ENSMUSG00000000194.14	ENSMUST00000172422.8	1534	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	124.164616823819	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTCTTTTTTTTTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	31042362	31082125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_31042494_31057032_31057154_31058173_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858
ENSMUST00000172429.8	chr17	-	1878	4	FSM	ENSMUSG00000038500.16	ENSMUST00000172429.8	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	20.5101600838869	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36289863	36283432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602
ENSMUST00000172442.2	chr10	-	4039	2	FSM	ENSMUSG00000061904.13	ENSMUST00000172442.2	4039	2	0	0	0	0	multi-exon	FALSE	canonical	1	1248	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAACACAACT	NA	False	NA	NA	False	TATAAA	-22	NA	90959884	90955636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90959569_90959777
ENSMUST00000172444.2	chr9	-	603	2	FSM	ENSMUSG00000004771.13	ENSMUST00000172444.2	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTGTTTACTCTTCAT	NA	False	NA	-4	True	AATAAA	-20	NA	64633002	64623886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_64624271_64632783
ENSMUST00000172445.4	chr10	-	624	1	FSM	ENSMUSG00000071303.5	ENSMUST00000172445.4	624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCTCATGCGTAGTGTA	NA	False	NA	NA	False	NA	NA	NA	56231170	56230546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_56230500_56231200
ENSMUST00000172448.2	chr7	-	2460	2	FSM	ENSMUSG00000062040.15	ENSMUST00000172448.2	2460	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGACCCATTGAGGACA	NA	False	NA	NA	False	NA	NA	NA	29598288	29593503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29595852_29598176
ENSMUST00000172450.3	chr9	-	6873	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTTTGTTTGTTTATT	3912	False	NA	NA	False	CATAAA	-16	NA	45896349	45874156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ENSMUST00000172450.3-0	chr9	-	4190	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	227	2456	0	-2456	multi-exon	FALSE	canonical	3	321	junction_5	34.2169548615887	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	4139	False	NA	-3	True	TATAAA	-21	NA	45896122	45876612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ENSMUST00000172455.3	chr17	+	1544	5	FSM	ENSMUSG00000073423.11	ENSMUST00000172455.3	1544	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	35.2233942146409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACATGATTTTTACCT	4928	False	NA	3	True	NA	NA	NA	33848074	33850664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33850438_33850515
ENSMUST00000172457.8	chr7	-	5130	4	FSM	ENSMUSG00000008683.17	ENSMUST00000172457.8	5130	4	0	0	0	0	multi-exon	FALSE	canonical	3	8104	junction_2	1380.96640879575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTCTTGTCTGAATGG	NA	False	NA	NA	False	AATAAA	-17	NA	117714479	117703600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331
ENSMUST00000172468.2	chr17	+	753	2	FSM	ENSMUSG00000041354.17	ENSMUST00000172468.2	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGTGTCTCTGGGTCCC	3195	False	NA	NA	False	ATTAAA	-21	NA	34148516	34149469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34149019_34149218
ENSMUST00000172501.8	chr17	-	579	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	37.0497975702972	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAAATAGACTTTTTCT	6010	False	NA	NA	False	AATAAA	-14	NA	35171444	35169218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
ENSMUST00000172518.8	chr17	-	710	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	61.4532342517463	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGATGTTATGTGTG	NA	False	NA	-13	True	ACTAAA	-15	NA	37269425	37265249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
ENSMUST00000172521.8	chr3	-	2510	16	FSM	ENSMUSG00000004591.17	ENSMUST00000172521.8	2510	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.369427426839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAATATCAATTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	142587751	142510549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_142510629_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ENSMUST00000172529.8	chr7	+	1898	13	FSM	ENSMUSG00000015165.17	ENSMUST00000172529.8	1898	13	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	1654.75498983653	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28508232	28521674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28508285_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUST00000172531.2	chr17	-	691	2	FSM	ENSMUSG00000092203.8	ENSMUST00000172531.2	691	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCTTTAAGTTCTGTA	6016	False	NA	NA	False	NA	NA	NA	35171438	35170569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35171150_35171327
ENSMUST00000172533.8	chr4	-	2464	11	FSM	ENSMUSG00000028479.19	ENSMUST00000172533.8	2464	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.5784821769702	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTTGATATCTGGTCCC	6098	False	NA	-10	True	NA	NA	NA	44066920	44036829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041890_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754
ENSMUST00000172539.8	chr14	-	707	4	FSM	ENSMUSG00000021952.17	ENSMUST00000172539.8	707	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	139.907906217705	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGAGAGATGGCTCAGCA	NA	False	NA	NA	False	AAAAAG	-15	NA	57902421	57879235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57879618_57880538_57880681_57885875_57885982_57902344
ENSMUST00000172556.8	chr5	-	6486	20	FSM	ENSMUSG00000038056.16	ENSMUST00000172556.8	6486	20	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	15.8587951951449	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAGAAAAAAAAAAGA	NA	False	NA	NA	False	CATAAA	-5	NA	25513548	25477423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486670_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25503867_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436
ENSMUST00000172557.2	chr14	+	700	7	FSM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	922.719651657834	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAAGATGACCTTGAT	NA	False	NA	-1	True	NA	NA	NA	55132074	55135591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55132127_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUST00000172572.9	chr3	-	799	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	72	183	0	0	multi-exon	FALSE	canonical	3	365	junction_2	27.675199487387	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1310	False	NA	-23	True	AATAAA	-28	NA	95041250	95037029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUST00000172577.8	chr2	+	1518	3	FSM	ENSMUSG00000050373.14	ENSMUST00000172577.8	1825	3	26	281	0	147	multi-exon	FALSE	canonical	3	11	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGCAATCTCTTTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	164627936	164634691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_164628245_164628617_164628769_164633632
ENSMUST00000172579.4	chr13	-	2587	4	FSM	ENSMUSG00000074832.12	ENSMUST00000172579.4	2587	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	43.8254111979188	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGACTTTGCAACCTGC	NA	False	NA	NA	False	NA	NA	NA	66589139	66577950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66580291_66581478_66581540_66581739_66581867_66589080
ENSMUST00000172599.2	chr17	+	843	4	FSM	ENSMUSG00000007041.10	ENSMUST00000172599.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_3	59.6452475521358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTGCAGATGTCT	4160	False	NA	NA	False	NA	NA	NA	35271425	35274717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35271521_35271756_35271883_35272008_35272116_35274202
ENSMUST00000172620.8	chr15	+	4645	16	FSM	ENSMUSG00000022394.15	ENSMUST00000172620.8	4645	16	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_14	41.7399355799961	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	False	NA	7	True	AATAAA	-14	NA	81548154	81572506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81548226_81551359_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ENSMUST00000172649.8	chr17	+	2652	11	FSM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	101.139952541021	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTCGTATTGTGTGGAT	NA	False	NA	9	True	AATAAA	-12	NA	34029496	34041888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34029540_34035159_34035238_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUST00000172672.8	chr17	+	1311	3	FSM	ENSMUSG00000036214.15	ENSMUST00000172672.8	652	3	22	-681	0	0	multi-exon	FALSE	canonical	3	30	junction_1	106.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTGCTAATGGTACC	NA	False	NA	17	True	AATAAA	-17	NA	37269532	37276514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37269979_37275248_37275325_37275725
ENSMUST00000172678.8	chr17	+	750	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAGGGACAGAAGTGTC	NA	False	NA	NA	False	NA	NA	NA	35295906	35297526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
ENSMUST00000172678.8-0	chr17	+	1033	4	FSM	ENSMUSG00000013766.12	ENSMUST00000172678.8	750	4	-29	-254	0	0	multi-exon	FALSE	canonical	3	186	junction_1	129.208702837266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGAGAGCTGTCTGTG	NA	False	NA	20	True	NA	NA	NA	35295877	35297780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35295967_35296110_35296183_35296812_35296939_35297034
ENSMUST00000172688.4	chr13	-	526	2	FSM	ENSMUSG00000074832.12	ENSMUST00000172688.4	526	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCCTCGGTTCATAAA	NA	False	NA	NA	False	AATAAA	-36	NA	66567656	66566380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66566880_66567629
ENSMUST00000172689.8	chr12	+	2328	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGGAGAAAAGTTCAGCA	NA	False	NA	NA	False	NA	NA	NA	3941727	3957842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUST00000172689.8-0	chr12	+	3369	18	FSM	ENSMUSG00000020661.16	ENSMUST00000172689.8	2328	18	90	-1131	74	426	multi-exon	FALSE	canonical	3	65	junction_1	19.4274446476198	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAACATACAAAA	NA	False	NA	-15	True	NA	NA	NA	3941817	3958973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3941861_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUST00000172699.2	chr3	+	5778	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCTTTCACTGTGTG	NA	False	NA	17	True	ATTAAA	-18	NA	88439701	88448703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88440156_88443379
ENSMUST00000172699.2-0	chr3	+	4008	2	FSM	ENSMUSG00000074480.5	ENSMUST00000172699.2	5778	2	-421	2191	-421	-2191	multi-exon	FALSE	canonical	3	19	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATGTAGCAAAGAACCT	NA	False	NA	NA	False	AATAAA	-16	NA	88439280	88446512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88440156_88443379
ENSMUST00000172702.9	chr9	-	3797	12	FSM	ENSMUSG00000032113.17	ENSMUST00000172702.9	3797	12	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_7	38.0821209215597	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGACAGCTATATTTACA	932	False	NA	NA	False	NA	NA	NA	36637670	36619777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092
ENSMUST00000172709.8	chrX	-	3783	7	FSM	ENSMUSG00000057836.13	ENSMUST00000172709.8	3783	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	560.301406982587	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	-5	True	AATAAA	-18	NA	72140629	72129898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72136911_72137788_72137859_72138551_72138689_72140586
ENSMUST00000172715.8	chr5	-	4114	31	FSM	ENSMUSG00000060261.17	ENSMUST00000172715.8	4114	31	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_23	92.6270238945177	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAAACTCATTCTTTTC	699	False	NA	-11	True	AATAAA	-23	NA	134343536	134266695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ENSMUST00000172732.8	chr5	-	4699	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_12	79.0184138174275	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	-17	True	NA	-4	True	AATAAA	-19	NA	65492964	65419194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUST00000172733.2	chr17	-	4488	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	42.6614580154031	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATTTCTAATATTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	64638860	64588014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ENSMUST00000172739.2	chr17	-	371	2	FSM	ENSMUSG00000024325.9	ENSMUST00000172739.2	371	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTCTCAAAGCACTAAA	NA	False	NA	NA	False	NA	NA	NA	34243626	34243164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34243393_34243483
ENSMUST00000172748.8	chr15	+	3368	17	FSM	ENSMUSG00000022394.15	ENSMUST00000172748.8	3368	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	166.366864470513	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81548156	81572516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571192
ENSMUST00000172753.2	chr17	-	2803	1	FSM	ENSMUSG00000090877.4	ENSMUST00000172753.2	2803	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATATTTTGTCTGTTTG	8771	False	NA	NA	False	AATAAA	-8	NA	35178214	35175411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35175400_35178200
ENSMUST00000172761.8	chr7	+	2018	11	FSM	ENSMUSG00000002409.19	ENSMUST00000172761.8	2018	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.57135531087365	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCCCCTCCCTGGGGC	NA	False	NA	NA	False	NA	NA	NA	27878918	27886348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885258_27885455_27885786_27885894_27885976
ENSMUST00000172767.9	chr17	-	1398	5	FSM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	25.5196003103497	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAAGCTGTTC	2676	False	NA	-11	True	AATAAA	-33	NA	33937644	33910488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ENSMUST00000172785.8	chr17	+	2102	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	1719	False	NA	26	True	AATAAA	-25	NA	35481705	35486475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUST00000172785.8-0	chr17	+	1590	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	366	146	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.54341856605645	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTGAAAGTGACCTTGA	2085	False	NA	NA	False	NA	NA	NA	35482071	35486329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUST00000172789.2	chr17	+	1460	3	FSM	ENSMUSG00000024462.18	ENSMUST00000172789.2	1460	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	4.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGTAATTTGTCT	NA	False	NA	16	True	NA	NA	NA	37357459	37360359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37357669_37358345_37358550_37359312
ENSMUST00000172794.8	chr1	+	5679	29	FSM	ENSMUSG00000048000.16	ENSMUST00000172794.8	4029	29	1	-1651	0	0	multi-exon	FALSE	canonical	3	42	junction_9	32.8746847583241	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254751	87378518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ENSMUST00000172809.2	chr11	+	2000	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	255.452956564905	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1634	False	NA	2	True	ATTAAA	-19	NA	120675340	120679928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUST00000172818.8	chr17	-	4740	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	24	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATTGTGTGACCCTATC	NA	False	NA	-3	True	AATAAA	-30	NA	64638911	64587999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ENSMUST00000172826.2	chr16	-	3659	7	FSM	ENSMUSG00000051980.14	ENSMUST00000172826.2	3659	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4.09945795874961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGAGAGGTTACCCGG	NA	False	NA	NA	False	AAAACA	-15	NA	36381968	36314828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_36316337_36317951_36318076_36320538_36320770_36329955_36330841_36335815_36336123_36337963_36338391_36381791
ENSMUST00000172828.8	chr9	-	1925	11	FSM	ENSMUSG00000032423.13	ENSMUST00000172828.8	1925	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	353.000906514417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTAAGTAGATTTTTCC	NA	False	NA	-1	True	AATAAA	-28	NA	88364202	88335990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359152_88359241_88361623_88361732_88361846_88361966_88364108
ENSMUST00000172864.9	chr4	-	2261	8	FSM	ENSMUSG00000040606.15	ENSMUST00000172864.9	2261	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	80.4842486808089	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCATTTAATTTATTT	5104	False	NA	-30	True	AAAAAG	-13	NA	142205047	141868118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141869108_141870604_141870656_141874328_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_142204644
ENSMUST00000172868.8	chr17	-	2755	4	FSM	ENSMUSG00000015120.16	ENSMUST00000172868.8	2755	4	0	0	0	0	multi-exon	FALSE	canonical	3	4214	junction_3	351.970011348821	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTGGCTGCCAGAAGT	4263	False	NA	NA	False	NA	NA	NA	25492841	25485540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25487588_25488165_25488250_25488376_25488454_25492294
ENSMUST00000172873.2	chr9	+	373	2	FSM	ENSMUSG00000033335.18	ENSMUST00000172873.2	373	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGGTATGAGAAATAGA	348	False	NA	NA	False	NA	NA	NA	21368402	21368866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21368708_21368798
ENSMUST00000172904.8	chr5	-	3274	25	FSM	ENSMUSG00000060261.17	ENSMUST00000172904.8	3274	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	106.011267744938	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	6238	False	NA	-12	True	AATAAA	-22	NA	134308719	134266696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308625
ENSMUST00000172906.8	chr8	-	8481	13	FSM	ENSMUSG00000035569.18	ENSMUST00000172906.8	8481	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	115.103184384949	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGTGTTTTTAATTCCT	NA	False	NA	NA	False	NA	NA	NA	123701532	123610560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467
ENSMUST00000172912.8	chr17	-	1570	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	28.0698836361489	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATGCTGTGTGTATCTG	NA	False	NA	-4	True	AATAAA	-32	NA	34219263	34214990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUST00000172914.2	chr19	+	1089	4	FSM	ENSMUSG00000024856.11	ENSMUST00000172914.2	1089	4	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	272.960721635102	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTGTGTGTGGTTCC	7095	False	NA	36	True	AATAAA	-25	NA	4147400	4149019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4147734_4147816_4147918_4148004_4148138_4148497
ENSMUST00000172915.8	chr11	-	5144	16	FSM	ENSMUSG00000020899.17	ENSMUST00000172915.8	5144	16	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_14	42.2712931221914	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTGTTTTCCGATGG	NA	False	NA	-14	True	NA	NA	NA	68885102	68876525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68884285_68884391_68884454_68884633_68884791_68885083
ENSMUST00000172931.2	chr17	+	1249	3	FSM	ENSMUSG00000059791.15	ENSMUST00000172931.2	302	3	-148	-799	0	0	multi-exon	FALSE	canonical	1	2	junction_1	132.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTGTCTGTCCATGAC	4609	False	NA	24	True	AATAAA	-18	NA	36172229	36176294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36172410_36175003_36175181_36175402
ENSMUST00000172946.2	chr9	-	3228	3	FSM	ENSMUSG00000042688.17	ENSMUST00000172946.2	3228	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAGAAAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	75317278	75301015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_75302937_75304860_75306034_75317144
ENSMUST00000172975.3	chr19	-	1975	6	FSM	ENSMUSG00000024955.16	ENSMUST00000172975.3	1975	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	47.9941663121676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGTCGGTGAGTCAC	9880	False	NA	0	True	AATATA	-17	NA	6898419	6888344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6897430_6897768_6898382
ENSMUST00000172983.8	chr7	-	1165	5	FSM	ENSMUSG00000002985.17	ENSMUST00000172983.8	817	5	0	-348	0	0	multi-exon	FALSE	canonical	3	31	junction_4	5193.26072906031	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432963	19430196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432328_19432399_19432935
ENSMUST00000173014.3	chr12	+	2030	1	FSM	ENSMUSG00000075707.7	ENSMUST00000173014.3	2030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGGTCCGTTTATTT	NA	False	NA	27	True	AATAAA	-24	NA	110245501	110247531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110245500_110247500
ENSMUST00000173015.8	chr17	-	1418	5	FSM	ENSMUSG00000079557.12	ENSMUST00000173015.8	1418	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	109.184476918654	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAAGCTGTTC	2706	False	NA	-11	True	AATAAA	-33	NA	33937614	33910488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33911178_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ENSMUST00000173033.8	chr17	+	2588	11	FSM	ENSMUSG00000064120.15	ENSMUST00000173033.8	2588	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	9.4387499172295	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGGGGACTCTTGTCTG	NA	False	NA	9	True	AATAAA	-25	NA	49735437	49762463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759871_49761057
ENSMUST00000173035.2	chr17	+	1406	3	FSM	ENSMUSG00000092390.2	ENSMUST00000173035.2	1406	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTAGTAAAGACTTTG	NA	False	NA	NA	False	NA	NA	NA	38320537	38323287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_38320666_38320869_38320931_38322070
ENSMUST00000173037.8	chr3	+	3578	14	FSM	ENSMUSG00000007379.16	ENSMUST00000173037.8	3578	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	71.904193325226	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTCCCACAGATCT	4649	False	NA	NA	False	GATAAA	-9	NA	103048283	103077047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103048472_103053827_103053877_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ENSMUST00000173042.9	chr10	+	3310	14	FSM	ENSMUSG00000043259.16	ENSMUST00000173042.9	3310	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	7.58072922754149	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGTTGAAAGCACAGTAA	9898	False	NA	NA	False	AATAAA	-21	NA	70276709	70394566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ENSMUST00000173078.8	chr8	+	7354	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATGAATCTTAGTAAACT	NA	False	NA	-23	True	AATATA	-16	NA	80366246	80404353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ENSMUST00000173080.10	chr17	-	1138	6	FSM	ENSMUSG00000073406.11	ENSMUST00000173080.10	1138	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	160.992670640623	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGTTGATTAGTGGAG	NA	False	NA	-79	True	NA	NA	NA	36395115	36391080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394858_36395051
ENSMUST00000173084.8	chr17	-	1286	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_7	2152.45295286232	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTTTTTGTTGCATT	4747	False	NA	NA	False	AATAAA	-9	NA	25492357	25480894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ENSMUST00000173086.2	chr2	-	580	1	FSM	ENSMUSG00000075279.6	ENSMUST00000173086.2	580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGACTGGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	74422253	74421673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_74421700_74422300
ENSMUST00000173107.8	chr5	+	9960	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_14	20.9676913758442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGCCCTGTGGGCAAG	NA	False	NA	NA	False	NA	NA	NA	48140479	48465075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUST00000173107.8-0	chr5	+	7722	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	16	2222	0	0	multi-exon	FALSE	canonical	3	71	junction_14	20.9676913758442	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48140495	48462853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUST00000173114.8	chr17	-	917	7	FSM	ENSMUSG00000024387.14	ENSMUST00000173114.8	917	7	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_6	341.027369380621	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCTCCTACTGTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	35340405	35335171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340286
ENSMUST00000173115.2	chr17	+	1150	5	FSM	ENSMUSG00000091705.9	ENSMUST00000173115.2	1150	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.6583123951777	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	7637	False	NA	NA	False	NA	NA	NA	35563974	35565738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35564007_35564133_35564251_35564429_35564463_35564635_35564685_35564819
ENSMUST00000173122.2	chr17	-	533	2	FSM	ENSMUSG00000024446.14	ENSMUST00000173122.2	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	770	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTTCTGTGGTATC	NA	False	NA	-22	True	AATAAA	-14	NA	36567242	36566564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36566691_36566835
ENSMUST00000173132.8	chr17	+	438	3	FSM	ENSMUSG00000041881.14	ENSMUST00000173132.8	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	4049.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAATCTGTCTTTTCTT	4106	False	NA	25	True	AATATA	-16	NA	34043577	34057283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34043655_34048640_34048791_34057072
ENSMUST00000173135.8	chr3	-	1409	13	FSM	ENSMUSG00000068921.15	ENSMUST00000173135.8	1409	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	248.441964495176	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGACAGCGGCGGTGGC	NA	False	NA	NA	False	NA	NA	NA	88858488	88831134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858267
ENSMUST00000173154.8	chr4	+	2773	25	FSM	ENSMUSG00000017264.17	ENSMUST00000173154.8	2773	25	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_23	124.10724948608	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAGAAAGATGGTTCT	NA	False	NA	NA	False	ATTAAA	-11	NA	148642887	148666847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666218_148666292_148666740
ENSMUST00000173163.8	chr15	-	3018	17	FSM	ENSMUSG00000042632.18	ENSMUST00000173163.8	3018	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	64.3206991857987	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212403	79170427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834_79211915_79212288
ENSMUST00000173168.8	chr8	+	6073	10	FSM	ENSMUSG00000031976.15	ENSMUST00000173168.8	6073	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	56.6139188050884	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTATTCTGCTGGGTA	NA	False	NA	20	True	AATAAA	-24	NA	124748246	124775243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124748547_124750198_124750338_124751794_124751972_124754597_124757929_124761766_124761915_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ENSMUST00000173182.2	chr17	+	610	2	FSM	ENSMUSG00000041881.14	ENSMUST00000173182.2	610	2	0	0	0	0	multi-exon	FALSE	canonical	3	8081	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCCTTGTCCTCAGGC	4096	False	NA	NA	False	NA	NA	NA	34043567	34045097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34043655_34044574
ENSMUST00000173183.2	chr8	-	731	7	FSM	ENSMUSG00000015023.8	ENSMUST00000173183.2	731	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	37.1786228900426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAATGGAATGTTAAAGT	7716	False	NA	NA	False	NA	NA	NA	111724402	111707104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ENSMUST00000173194.8	chr2	-	6920	24	FSM	ENSMUSG00000036591.17	ENSMUST00000173194.8	6920	24	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_22	15.1268111602881	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCACTGTTGGGAGCTT	NA	False	NA	-21	True	AATAAA	-15	NA	20972531	20852750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140
ENSMUST00000173198.8	chr6	-	561	6	FSM	ENSMUSG00000030188.13	ENSMUST00000173198.8	561	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	222.978563992147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGTACAAGACTTGAA	NA	False	NA	NA	False	TTTAAA	-35	NA	131270114	131261663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131268703_131268904_131270034
ENSMUST00000173199.8	chr12	+	2820	20	FSM	ENSMUSG00000071454.14	ENSMUST00000173199.8	2820	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	121.930910004004	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGTGATCGCCAAGTC	NA	False	NA	NA	False	NA	NA	NA	3622380	3831796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ENSMUST00000173206.8	chr3	+	4879	18	FSM	ENSMUSG00000007379.16	ENSMUST00000173206.8	4879	18	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	64.3554145131754	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCACATAAGATGTGTAG	NA	False	NA	NA	False	TTTAAA	-36	NA	103009919	103077085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ENSMUST00000173246.8	chr13	+	5997	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_5	80.8182205637225	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGTGGGAAGGG	NA	False	NA	16	True	AATAAA	-18	NA	44884746	45075119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ENSMUST00000173253.2	chr17	-	979	3	FSM	ENSMUSG00000001525.11	ENSMUST00000173253.2	979	3	0	0	0	0	multi-exon	FALSE	canonical	3	8733	junction_1	24	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTCCGTTTCCCGGGC	NA	False	NA	NA	False	NA	NA	NA	36147952	36146496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36146932_36147054_36147166_36147519
ENSMUST00000173260.8	chr11	-	1283	7	FSM	ENSMUSG00000020534.15	ENSMUST00000173260.8	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	1109	junction_4	39.2233632191609	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTGTTAAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	60701917	60688070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUST00000173269.2	chr17	+	3619	5	FSM	ENSMUSG00000007038.6	ENSMUST00000173269.2	3619	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	25.7001945517928	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGATTCGGGCTGCGTTC	7984	False	NA	NA	False	NA	NA	NA	35150289	35154929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35150524_35150891_35151085_35151541_35153162_35153258_35153482_35153580
ENSMUST00000173283.2	chr7	-	1425	4	FSM	ENSMUSG00000092335.2	ENSMUST00000173283.2	1425	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	19.6129209111409	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATAATCAGTTTGATGA	NA	False	NA	NA	False	NA	NA	NA	42241971	42229206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42230333_42232070_42232132_42232329_42232457_42241860
ENSMUST00000173286.8	chr8	+	7213	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173286.8	7213	21	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_10	41.3350940485201	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGGATTCTTTGGTCT	NA	False	NA	17	True	ATTAAA	-17	NA	80366332	80404301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387669_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ENSMUST00000173311.8	chr17	+	4211	23	FSM	ENSMUSG00000023852.15	ENSMUST00000173311.8	4211	23	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_10	32.9626949171081	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGGCATGTTTTCTGAC	NA	False	NA	NA	False	NA	NA	NA	15925235	15973254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583
ENSMUST00000173329.8	chr17	-	2566	4	FSM	ENSMUSG00000079557.12	ENSMUST00000173329.8	2566	4	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	10.1434160364686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAAAAAAATT	2689	False	NA	NA	False	NA	NA	NA	33937631	33913190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33915221_33921986_33922183_33928718_33928947_33937519
ENSMUST00000173341.9	chr5	-	4302	33	FSM	ENSMUSG00000060261.17	ENSMUST00000173341.9	4302	33	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_8	74.2225788486058	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTCATTCTTTTCCTG	661	False	NA	-8	True	AATAAA	-26	NA	134343574	134266692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ENSMUST00000173347.8	chr11	+	3631	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173347.8	3631	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.9559583885031	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATGTGGCAAGACCT	NA	False	NA	20	True	TTTAAA	-16	NA	82672018	82692851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUST00000173354.9	chr17	+	2502	10	FSM	ENSMUSG00000039656.18	ENSMUST00000173354.9	2502	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	72.5503656472905	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCATTTTCTGGACTG	NA	False	NA	17	True	CATAAA	-17	NA	34251169	34257369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ENSMUST00000173357.8	chr17	+	1399	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	84.0802592764794	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCCGTCAGCCTCTAG	-6	True	NA	30	True	AGTAAA	-20	NA	35069373	35075230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUST00000173369.2	chr17	-	2914	6	FSM	ENSMUSG00000045409.17	ENSMUST00000173369.2	2914	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	19.0682982984848	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATTTTGTCACAAAAGG	NA	False	NA	NA	False	NA	NA	NA	36580112	36570001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36571838_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500
ENSMUST00000173397.8	chr9	+	3510	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	0	0	0	0	multi-exon	FALSE	canonical	2	185	junction_20	132.122244531343	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACGTGTGTGGGCCTTTT	5866	False	NA	18	True	AATAAA	-28	NA	21336227	21418434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ENSMUST00000173433.8	chr12	-	5788	27	FSM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_26	7.265566842199	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	55033292	54940335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ENSMUST00000173477.8	chr3	-	892	8	FSM	ENSMUSG00000064068.16	ENSMUST00000173477.8	892	8	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_5	268.396143407312	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATGGCGTTCCTGTTC	NA	False	NA	-148	True	NA	NA	NA	89121147	89116519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117981_89119989_89120070_89120183_89120254_89121119
ENSMUST00000173478.2	chr17	+	962	3	FSM	ENSMUSG00000092586.9	ENSMUST00000173478.2	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGTGTTTATTGTTAGA	NA	False	NA	NA	False	AATAAA	-17	NA	35286300	35289026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35286421_35287842_35287954_35288295
ENSMUST00000173482.8	chr18	-	871	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173482.8	871	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	659.109626693466	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCTGATGTCAGACTG	NA	False	NA	-9	True	NA	NA	NA	36803339	36800298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803314
ENSMUST00000173486.8	chr17	-	579	4	FSM	ENSMUSG00000024446.14	ENSMUST00000173486.8	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_3	70.7153920067383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGGTATCTCAACT	NA	False	NA	-16	True	AATAAA	-20	NA	36568735	36566558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497
ENSMUST00000173492.9	chr17	-	2357	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	0	0	0	0	multi-exon	FALSE	canonical	1	168	junction_4	135.039586788467	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTTGCTTTTTT	9693	False	NA	-7	True	AATAAA	-26	NA	34109635	34094632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUST00000173499.2	chr19	-	485	2	FSM	ENSMUSG00000092341.4	ENSMUST00000173499.2	485	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGACATACAGGAAGGTG	4062	False	NA	3	True	NA	NA	NA	5852699	5851943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5851995_5852265
ENSMUST00000173506.8	chr8	+	1238	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCCAGGAGGGAAAGGGC	NA	False	NA	-87	True	AATGAA	-27	NA	112263751	112349605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
ENSMUST00000173506.8-0	chr8	+	1949	5	FSM	ENSMUSG00000033545.15	ENSMUST00000173506.8	1238	5	-611	-100	-131	100	multi-exon	FALSE	canonical	3	66	junction_4	22.2640405137971	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTCGACTGGTGTT	NA	False	NA	13	True	TATAAA	-4	NA	112263140	112349705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349106
ENSMUST00000173527.2	chr3	-	774	5	FSM	ENSMUSG00000092607.10	ENSMUST00000173527.2	774	5	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	26.3379479079142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGAGATCAGTAAGGAAC	1310	False	NA	NA	False	NA	NA	NA	95041250	95037603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95037670_95040135_95040225_95040327_95040423_95040510_95040940_95041155
ENSMUST00000173538.2	chr6	+	1938	3	FSM	ENSMUSG00000029913.15	ENSMUST00000173538.2	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAACTAAACCAAAC	NA	False	NA	NA	False	NA	NA	NA	65756005	65809914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_65756178_65771283_65771368_65808232
ENSMUST00000173554.9	chr17	+	939	1	FSM	ENSMUSG00000039656.18	ENSMUST00000173554.9	939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAAGGCTCACTTTCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	34250789	34251728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34250800_34251700
ENSMUST00000173558.2	chr17	-	763	5	FSM	ENSMUSG00000024393.15	ENSMUST00000173558.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_4	32.2102468168128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTCTGGAGTCTCACTT	NA	False	NA	-60	True	TATAAA	-36	NA	35369342	35368152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203
ENSMUST00000173567.2	chr11	+	1252	5	FSM	ENSMUSG00000092300.8	ENSMUST00000173567.2	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	1.87082869338697	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTGTCAATCTTCG	NA	False	NA	NA	False	AATAAA	-17	NA	116107365	116111113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116107507_116107596_116107768_116107857_116107960_116108919_116109124_116110479
ENSMUST00000173578.2	chr7	+	768	2	FSM	ENSMUSG00000015165.17	ENSMUST00000173578.2	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	5199	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAGAAGGATGGGCCCA	NA	False	NA	NA	False	NA	NA	NA	28517258	28518137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28517958_28518068
ENSMUST00000173584.8	chr17	+	4048	29	FSM	ENSMUSG00000007029.17	ENSMUST00000173584.8	4048	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	416.176527192145	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGAAGCGCTCTAGA	9538	False	NA	NA	False	NA	NA	NA	35220026	35235006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569
ENSMUST00000173642.2	chr18	+	3526	23	FSM	ENSMUSG00000024498.17	ENSMUST00000173642.2	3526	23	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_21	184.268556260818	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGGGCAGTCTCAGAA	NA	False	NA	NA	False	NA	NA	NA	42644587	42707909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
ENSMUST00000173654.2	chr2	-	424	2	FSM	ENSMUSG00000036591.17	ENSMUST00000173654.2	424	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCGAGTAACACCGCCTG	NA	False	NA	NA	False	NA	NA	NA	20973691	20972500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_20972528_20973294
ENSMUST00000173655.8	chr11	-	1213	8	FSM	ENSMUSG00000018727.20	ENSMUST00000173655.8	1213	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	68.8879599088851	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600346	113588997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_113589493_113590661_113590809_113592881_113592922_113593238_113593336_113594096_113594193_113597242_113597396_113599629_113599681_113600212
ENSMUST00000173659.2	chr4	+	2547	2	FSM	ENSMUSG00000087166.10	ENSMUST00000173659.2	2547	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	941	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGGAGTGCTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	98621439	98626353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_98622316_98624682
ENSMUST00000173679.8	chr11	-	2889	27	FSM	ENSMUSG00000020929.15	ENSMUST00000173679.8	2889	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	377.78382879866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGGCTGGCAGCTCT	NA	False	NA	NA	False	NA	NA	NA	102768540	102729626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759449_102759920_102759997_102760993_102761073_102761845_102762012_102768435
ENSMUST00000173704.8	chr13	+	4135	19	FSM	ENSMUSG00000038518.16	ENSMUST00000173704.8	4135	19	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	182.476448674857	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTGTACGTAGATATC	9884	False	NA	NA	False	ATTAAA	-8	NA	44884249	45073584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_44884365_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ENSMUST00000173707.2	chr17	-	724	4	FSM	ENSMUSG00000064308.11	ENSMUST00000173707.2	724	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.84754619472471	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGGGAGTCCTGTATCT	NA	False	NA	NA	False	NA	NA	NA	37292109	37288729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_37288999_37289344_37289439_37289542_37289826_37292031
ENSMUST00000173713.8	chr17	-	890	7	FSM	ENSMUSG00000015120.16	ENSMUST00000173713.8	890	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_6	1745.07048568246	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCAGCTAGTTTCTTT	3820	False	NA	NA	False	GATAAA	-19	NA	25493284	25481148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493135
ENSMUST00000173720.2	chr2	+	1902	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173720.2	620	4	-198	-1084	0	0	multi-exon	FALSE	canonical	3	8	junction_1	365.954763446097	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863705	172876527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172864200_172864584_172864709_172865119_172865175_172875298
ENSMUST00000173722.8	chr11	+	5797	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.7105805272123	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTCTACCTGAGATGTT	NA	False	NA	-65	True	AAAAAG	-44	NA	82672028	82695024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUST00000173727.8	chr11	+	3636	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	31.7035261983143	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTATGTGGCAAGACCTT	NA	False	NA	21	True	TTTAAA	-17	NA	82672018	82692852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUST00000173727.8-0	chr11	+	5935	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	-51	-2248	0	0	multi-exon	FALSE	canonical	3	52	junction_3	31.7035261983143	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTTTCCCCCCCAA	NA	False	NA	11	True	AATAAA	-16	NA	82671967	82695100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUST00000173729.8	chr12	-	1090	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	0	611	0	0	multi-exon	FALSE	canonical	3	43	junction_6	78.2148039411693	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAAAAGAGAAGCCTTGG	NA	False	NA	-11	True	AATAAA	-14	NA	21336098	21320704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
ENSMUST00000173731.8	chr17	+	2848	10	FSM	ENSMUSG00000019432.16	ENSMUST00000173731.8	2848	10	0	0	0	0	multi-exon	FALSE	canonical	3	2134	junction_3	141.063246475377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAACCGTGTCTGTGGTG	NA	False	NA	10	True	NA	NA	NA	35460845	35472656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUST00000173734.9	chr9	+	1228	4	FSM	ENSMUSG00000092622.9	ENSMUST00000173734.9	1228	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	87.8116671569837	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGGTGTGTATTTGA	NA	False	NA	26	True	AATAAA	-13	NA	73009679	73011720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_73009958_73010111_73010292_73010497_73011172_73011624
ENSMUST00000173734.9-0	chr9	+	1156	4	FSM	ENSMUSG00000092622.9	ENSMUST00000173734.9	1228	4	72	0	-40	0	multi-exon	FALSE	canonical	3	51	junction_3	87.8116671569837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGGTGTGTATTTGA	NA	False	NA	26	True	AATAAA	-13	NA	73009751	73011720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_73009958_73010111_73010292_73010497_73011172_73011624
ENSMUST00000173739.8	chr7	-	1221	3	FSM	ENSMUSG00000002985.17	ENSMUST00000173739.8	1221	3	0	0	0	0	multi-exon	FALSE	canonical	3	10421	junction_2	50	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432332	19430196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19431029_19431403_19431573_19432112
ENSMUST00000173741.8	chr4	-	3203	8	FSM	ENSMUSG00000028403.16	ENSMUST00000173741.8	3203	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	30.5420419509013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTGGTAAACTGCCT	NA	False	NA	NA	False	TATAAA	-34	NA	82777798	82722283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ENSMUST00000173744.8	chr11	+	2257	18	FSM	ENSMUSG00000018395.20	ENSMUST00000173744.8	2257	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	25.820514362377	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGAGAGAACTCCTT	937	False	NA	18	True	AATAAA	-15	NA	53458223	53491929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53481543_53481553_53484221_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ENSMUST00000173760.9	chr12	-	1810	2	FSM	ENSMUSG00000096458.8	ENSMUST00000173760.9	1312	2	0	-498	0	498	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATCTTTGTATACAT	NA	False	NA	-23	True	AATAAA	-16	NA	102709904	102707990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102709654_102709757
ENSMUST00000173789.2	chr17	+	783	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	124.071592236096	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	NA	False	NA	12	True	AATAAA	-15	NA	34029496	34041891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUST00000173801.8	chr9	-	2944	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_4	62.6802201655355	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTACAATTCGTTTT	NA	False	NA	NA	False	AATAAA	-34	NA	88364608	88337630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUST00000173804.8	chrX	+	3814	7	FSM	ENSMUSG00000072966.12	ENSMUST00000173804.8	3814	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	54.6669207311169	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCCTTCTTCACTTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	134739782	134745479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134740012_134740493_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ENSMUST00000173810.2	chr17	-	277	2	FSM	ENSMUSG00000024327.17	ENSMUST00000173810.2	277	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCACCTCATCCCGCAT	NA	False	NA	NA	False	GGGGCT	-15	NA	34250656	34249566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34249709_34250521
ENSMUST00000173814.2	chr17	+	1020	3	FSM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	112	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTGCTAATGGTACC	NA	False	NA	17	True	AATAAA	-17	NA	37269532	37276514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37269688_37275248_37275325_37275725
ENSMUST00000173824.8	chr7	+	2912	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_13	177.415201846273	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	False	NA	10	True	AATAAA	-20	NA	79944226	79965999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUST00000173836.8	chr5	+	849	3	FSM	ENSMUSG00000063646.19	ENSMUST00000173836.8	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	10.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCAGGAGATCCTGGA	NA	False	NA	NA	False	NA	NA	NA	37185678	37248791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_37185944_37242579_37242843_37248470
ENSMUST00000173844.8	chr17	-	312	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	68	2	0	0	multi-exon	FALSE	canonical	3	11527	junction_1	4307.03060897722	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGTCTAGAAATTGG	NA	False	NA	-27	True	AATAAA	-12	NA	34043468	34042025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
ENSMUST00000173856.2	chr1	+	1372	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAAAGCGAGTCTTTTA	NA	False	NA	-14	True	NA	NA	NA	89857955	89859584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_89858176_89858432
ENSMUST00000173856.2-0	chr1	+	2051	2	FSM	ENSMUSG00000092627.3	ENSMUST00000173856.2	1372	2	0	-679	0	679	multi-exon	FALSE	canonical	3	31	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGACCCGATTCTTTG	NA	False	NA	14	True	GATAAA	-21	NA	89857955	89860263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_89858176_89858432
ENSMUST00000173860.8	chr17	-	1544	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173860.8	1544	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	253.00296440951	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTTTGGTTTTTGTTAT	NA	False	NA	-71	True	NA	NA	NA	33979280	33965723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968877_33979196
ENSMUST00000173867.8	chr11	+	2484	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	0	0	0	0	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCCAGATGTTAGGTCT	NA	False	NA	NA	False	NA	NA	NA	22940518	22953780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ENSMUST00000173867.8-0	chr11	+	1936	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	107	441	0	188	multi-exon	FALSE	canonical	3	4673	junction_2	338.771431558561	5024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGTCATTTTAAAAT	NA	False	NA	22	True	ATTAAA	-22	NA	22940625	22953339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ENSMUST00000173869.8	chr17	-	1859	7	FSM	ENSMUSG00000002289.17	ENSMUST00000173869.8	1859	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	47.4812828620102	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAACATTTTGTTCTCTG	NA	False	NA	-11	True	AATAAA	-8	NA	34000517	33993881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999618_33999756_33999868_34000036
ENSMUST00000173870.8	chr11	-	2936	21	FSM	ENSMUSG00000020923.18	ENSMUST00000173870.8	2936	21	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_20	170.388167136101	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGTTTTTTAAATCA	8361	False	NA	NA	False	NA	NA	NA	102210568	102197311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102210149
ENSMUST00000173878.8	chr2	+	1743	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173878.8	936	4	14	-821	0	0	multi-exon	FALSE	canonical	0	0	junction_1	369.719713657071	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863705	172876527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172864041_172864584_172864709_172865119_172865175_172875298
ENSMUST00000173879.8	chr17	-	342	2	FSM	ENSMUSG00000067288.14	ENSMUST00000173879.8	342	2	0	0	0	0	multi-exon	FALSE	canonical	3	22076	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTTTTTCCAGCAGCGT	NA	False	NA	-12	True	AATAAA	-27	NA	34043320	34042010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34042305_34043272
ENSMUST00000173900.2	chr17	+	1111	2	FSM	ENSMUSG00000092368.2	ENSMUST00000173900.2	1111	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTATCTCTATTAGTC	NA	False	NA	NA	False	AATAAA	-45	NA	36305344	36349327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36305453_36348324
ENSMUST00000173913.8	chr3	-	2924	22	FSM	ENSMUSG00000004591.17	ENSMUST00000173913.8	2924	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	139.275840105842	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGCACATGAAGATGTG	NA	False	NA	NA	False	NA	NA	NA	142587676	142499469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142587371_142587555_142587640
ENSMUST00000173938.8	chr11	+	1626	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_5	64.9491253897148	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	-44	True	NA	NA	NA	80319448	80362735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ENSMUST00000173946.2	chr17	+	640	2	FSM	ENSMUSG00000041881.14	ENSMUST00000173946.2	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	8715	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTCTTTTCTTAGTAT	8895	False	NA	30	True	AATATA	-21	NA	34048366	34057288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34048791_34057072
ENSMUST00000173954.3	chr14	-	5357	8	FSM	ENSMUSG00000040123.18	ENSMUST00000173954.3	5357	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	29.0123126571166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTTTGGTGAAAATGA	9073	False	NA	-13	True	AATAAA	-28	NA	57048921	57028044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57048790
ENSMUST00000173969.2	chr12	-	1152	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTTCTGTAGCCTCTT	6362	False	NA	-1	True	AATAAA	-20	NA	102724059	102719533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102720426_102723799
ENSMUST00000173973.8	chr17	+	2080	7	FSM	ENSMUSG00000034254.18	ENSMUST00000173973.8	1105	7	0	-975	0	0	multi-exon	FALSE	canonical	1	5	junction_3	44.7688507781917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGGTTCTCTGCGGCCT	NA	False	NA	13	True	AATAAA	-13	NA	34824834	34832392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34825146_34829418_34829619_34829845_34829901_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUST00000173984.2	chr17	+	2315	18	FSM	ENSMUSG00000015461.16	ENSMUST00000173984.2	2315	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.9084469989445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCCCGAGGGTACCTC	9806	False	NA	NA	False	AATATA	-31	NA	34866184	34873853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34866300_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ENSMUST00000173987.2	chr17	-	924	5	FSM	ENSMUSG00000077450.14	ENSMUST00000173987.2	924	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	258.561767282017	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCCTTCACCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	33979254	33966387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33966788_33967483_33967560_33967840_33968035_33968755_33968952_33979196
ENSMUST00000173991.8	chr8	+	786	4	FSM	ENSMUSG00000031562.17	ENSMUST00000173991.8	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	45.0209827623619	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGACATATTGTGCAT	NA	False	NA	NA	False	AATATA	-19	NA	48563199	48590726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292
ENSMUST00000173997.2	chr2	+	1990	4	FSM	ENSMUSG00000027510.18	ENSMUST00000173997.2	440	4	-525	-1025	0	0	multi-exon	FALSE	canonical	2	17	junction_1	361.719351001421	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGAGGTTTTTCTC	NA	False	NA	NA	False	AATAAA	-23	NA	172863705	172876527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_172864288_172864584_172864709_172865119_172865175_172875298
ENSMUST00000174008.8	chr9	+	5405	34	FSM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_29	114.960846930185	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1332	False	NA	22	True	AATAAA	-19	NA	21527559	21614662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUST00000174011.8	chr13	-	2353	4	FSM	ENSMUSG00000021519.12	ENSMUST00000174011.8	2353	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	10.2306728354819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGGTCATTACTGTT	427	False	NA	NA	False	AATAAA	-15	NA	67081102	67069252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUST00000174021.8	chr15	-	3318	17	FSM	ENSMUSG00000042632.18	ENSMUST00000174021.8	3318	17	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_16	39.721638860324	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212164	79170427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ENSMUST00000174031.8	chr17	-	824	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCATTTCCGCCACTG	4596	False	NA	NA	False	NA	NA	NA	25492508	25481279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ENSMUST00000174031.8-1	chr17	-	2469	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	151	-1796	0	1406	multi-exon	FALSE	canonical	3	4214	junction_6	321.557148886477	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4747	False	NA	-1	True	ATTAAA	-19	NA	25492357	25479483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ENSMUST00000174037.8	chr17	-	665	5	FSM	ENSMUSG00000036185.10	ENSMUST00000174037.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	14.8218588577816	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTGGTTTGGCTCCTGT	NA	False	NA	NA	False	AATAAA	-35	NA	35246890	35244934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35245124_35245313_35245434_35245669_35245763_35246419_35246565_35246772
ENSMUST00000174048.8	chr17	-	560	5	FSM	ENSMUSG00000024309.16	ENSMUST00000174048.8	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	444.939602642876	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTTTACAGCCAGTCT	NA	False	NA	-15	True	AATAAA	-17	NA	34159299	34157892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159140_34159270
ENSMUST00000174050.8	chr9	+	2715	20	FSM	ENSMUSG00000033335.18	ENSMUST00000174050.8	2715	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	233.547802766982	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	6178	False	NA	15	True	AATAAA	-16	NA	21336539	21419050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ENSMUST00000174064.9	chr7	-	1095	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	150	163	0	0	multi-exon	FALSE	canonical	3	8700	junction_3	835.854984764436	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432963	19430196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
ENSMUST00000174072.8	chr12	-	3621	3	FSM	ENSMUSG00000046157.14	ENSMUST00000174072.8	3621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCTGTGACCCATCTG	NA	False	NA	-3	True	CATAAA	-24	NA	79027537	79008570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79011951_79024534_79024716_79027477
ENSMUST00000174093.8	chr11	-	1295	8	FSM	ENSMUSG00000020534.15	ENSMUST00000174093.8	1295	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	415.120587348804	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTTTCTGCTTACTCGG	5653	False	NA	-16	True	ATTAAA	-12	NA	60690229	60679726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60690113
ENSMUST00000174105.8	chr9	-	2142	12	FSM	ENSMUSG00000032113.17	ENSMUST00000174105.8	2142	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	131.27033490643	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGGGTCCTGTATTCC	721	False	NA	NA	False	ATTAAA	-12	NA	36637881	36620735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36637092_36637175_36637858
ENSMUST00000174113.8	chr10	+	512	6	FSM	ENSMUSG00000112241.2	ENSMUST00000174113.8	512	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	596.283288378938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGATTCACCTGTGAGA	NA	False	NA	NA	False	NA	NA	NA	77442030	77477377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77466559_77466596_77466682_77466729_77477293
ENSMUST00000174155.8	chr5	-	4141	35	FSM	ENSMUSG00000060261.17	ENSMUST00000174155.8	4141	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_34	136.294206504325	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	688	False	NA	-12	True	AATAAA	-22	NA	134343547	134266696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134305225_134305283_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343474
ENSMUST00000174159.8	chr11	-	1470	13	FSM	ENSMUSG00000018752.20	ENSMUST00000174159.8	1470	13	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	8.53871900358726	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCCCAAATTCTTTTG	5451	False	NA	-3	True	ATTAAA	-30	NA	69586636	69573873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69574171_69574679_69574819_69575043_69575160_69575310_69575359_69575485_69575565_69575854_69575957_69577782_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ENSMUST00000174160.3	chr15	+	4489	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174160.3	4489	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	70.217629948294	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTTGGTGTGCACGGT	62	False	NA	9	True	ATTAAA	-20	NA	12205203	12272326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266697_12266855_12269587
ENSMUST00000174162.2	chrX	-	360	2	FSM	ENSMUSG00000057836.13	ENSMUST00000174162.2	360	2	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTGTGTGGACATTT	NA	False	NA	NA	False	NA	NA	NA	72140665	72138407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72138689_72140586
ENSMUST00000174164.2	chr17	+	1711	6	FSM	ENSMUSG00000019432.16	ENSMUST00000174164.2	1711	6	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_1	90.1962305199059	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTCTCTCATTTT	NA	False	NA	NA	False	NA	NA	NA	35460780	35468846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926
ENSMUST00000174172.8	chr7	+	3008	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_13	238.868890688544	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACACTGTTTTGTCTTC	NA	False	NA	13	True	AATAAA	-23	NA	79944252	79966002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ENSMUST00000174189.2	chr10	-	14369	13	FSM	ENSMUSG00000047146.18	ENSMUST00000174189.2	14369	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	63.2183166143765	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCACCTGGTAGTCTAT	NA	False	NA	-6	True	AATAAA	-14	NA	62734897	62640355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62734722
ENSMUST00000174193.8	chr9	+	2609	6	FSM	ENSMUSG00000032517.17	ENSMUST00000174193.8	2609	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	5.38144961882948	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGTTCTTCATACAT	NA	False	NA	NA	False	AGTAAA	-26	NA	119978807	120010550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119978864_119983752_119983832_119996866_119997077_120002216_120002442_120008392_120008472_120008590
ENSMUST00000174196.8	chr7	+	2374	6	FSM	ENSMUSG00000030795.19	ENSMUST00000174196.8	2374	6	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_3	88.8603398598047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAAACCAACCC	1184	False	NA	NA	False	NA	NA	NA	127566662	127573499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725
ENSMUST00000174202.8	chr16	+	2306	8	FSM	ENSMUSG00000022514.15	ENSMUST00000174202.8	2306	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.88087934491604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTTCGTAGCATTAATTG	NA	False	NA	NA	False	AATAAA	-22	NA	26400502	26521106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_26400637_26442904_26442970_26495458_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837
ENSMUST00000174211.8	chr2	+	1163	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	46.4239970273995	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	172	False	NA	12	True	AATAAA	-12	NA	26476641	26482693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ENSMUST00000174216.8	chr17	-	1144	3	FSM	ENSMUSG00000015120.16	ENSMUST00000174216.8	1144	3	0	0	0	0	multi-exon	FALSE	canonical	3	4875	junction_1	136.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCCTAGCAGCTAGTTT	NA	False	NA	NA	False	GATAAA	-15	NA	25484843	25481152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25481466_25483739_25483820_25484092
ENSMUST00000174220.2	chr11	-	889	5	FSM	ENSMUSG00000042506.16	ENSMUST00000174220.2	889	5	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_3	18.1314643644687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAGGAAATGGAAT	NA	False	NA	NA	False	NA	NA	NA	61065855	61053597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ENSMUST00000174236.8	chr19	-	4606	3	FSM	ENSMUSG00000038843.19	ENSMUST00000174236.8	4606	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	7	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGTCTGCACACATTA	8034	False	NA	2	True	AATAAA	-21	NA	17334031	17303504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_17307853_17310473_17310621_17333920
ENSMUST00000174241.8	chr17	+	790	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174241.8	521	4	-49	-220	0	0	multi-exon	FALSE	canonical	3	88	junction_1	766.950237412224	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGGTTTGTCGTCTGCT	83	False	NA	26	True	AATAAA	-20	NA	35200837	35204867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35201062_35204084_35204116_35204224_35204285_35204392
ENSMUST00000174244.8	chr11	+	1736	8	FSM	ENSMUSG00000007739.11	ENSMUST00000174244.8	1736	8	0	0	0	0	multi-exon	FALSE	canonical	3	4673	junction_2	250.300227889694	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGAAAACCACAT	NA	False	NA	NA	False	NA	NA	NA	22940638	22949876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032
ENSMUST00000174259.8	chr14	+	1112	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	0	0	0	0	multi-exon	FALSE	canonical	1	117	junction_4	54.1775783881118	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTCTTTATTGTATG	NA	False	NA	14	True	AATAAA	-18	NA	55815816	55818985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ENSMUST00000174265.2	chr6	-	1743	14	FSM	ENSMUSG00000004266.16	ENSMUST00000174265.2	1743	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	43.6145027722546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCATTCGTCTGCAGG	9050	False	NA	NA	False	NA	NA	NA	124715547	124698070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124715461
ENSMUST00000174266.8	chr1	-	5399	40	FSM	ENSMUSG00000037470.15	ENSMUST00000174266.8	5399	40	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_33	91.5716164908405	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283242	36182566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250477_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ENSMUST00000174269.8	chr9	-	3286	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174269.8	3286	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	268.954664525916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTCATTAATATAAATG	NA	False	NA	34	True	AATAAA	-16	NA	88364184	88334692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345112_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUST00000174281.9	chr17	+	3611	24	FSM	ENSMUSG00000024392.18	ENSMUST00000174281.9	3611	24	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	176.22061486662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGTTGGTCTCTTTGCTG	9040	False	NA	NA	False	NA	NA	NA	35354705	35365325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35354981_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221
ENSMUST00000174282.8	chr9	-	3404	12	FSM	ENSMUSG00000032423.13	ENSMUST00000174282.8	3404	12	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	221.053263840518	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGCGAGTGTAACTT	NA	False	NA	-15	True	AATAAA	-18	NA	88364249	88334741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUST00000174287.2	chr19	-	3004	2	FSM	ENSMUSG00000092274.4	ENSMUST00000174287.2	3004	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTTAGAATTGTCATGG	10003	False	NA	-12	True	AATAAA	-15	NA	5895504	5892334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5894787_5894952
ENSMUST00000174288.2	chr2	+	4080	3	FSM	ENSMUSG00000034850.16	ENSMUST00000174288.2	842	3	0	-3238	0	-348	multi-exon	FALSE	canonical	2	7	junction_1	67.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGCCTGTAGTCTTCCT	2399	False	NA	7	True	AATAAA	-20	NA	127089892	127102679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_127090005_127097924_127098090_127098876
ENSMUST00000174299.9	chr17	+	2577	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	37.5838157971825	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	21	True	CATAAA	-21	NA	34250825	34257373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ENSMUST00000174302.8	chr11	-	3124	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	135	1433	135	0	multi-exon	FALSE	canonical	3	130	junction_20	166.063624855054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTCGGCTGCCGTCTCTG	9142	False	NA	-9	True	NA	NA	NA	102209787	102196818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ENSMUST00000174303.2	chr7	+	400	2	FSM	ENSMUSG00000046364.15	ENSMUST00000174303.2	400	2	0	0	0	0	multi-exon	FALSE	canonical	3	16424	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCGCGGGAATGCTGGA	NA	False	NA	NA	False	NA	NA	NA	109118476	109119145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109118856_109119124
ENSMUST00000174349.8	chr17	-	1012	6	FSM	ENSMUSG00000024436.17	ENSMUST00000174349.8	488	6	-52	-472	0	0	multi-exon	FALSE	canonical	3	24	junction_2	528.957313967772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4296	False	NA	-6	True	AATAAA	-21	NA	36227281	36221270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36221849_36222310_36222371_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUST00000174354.8	chr5	-	4084	34	FSM	ENSMUSG00000060261.17	ENSMUST00000174354.8	4084	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_33	101.25304017701	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	688	False	NA	-12	True	AATAAA	-22	NA	134343547	134266696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343474
ENSMUST00000174355.8	chr7	-	1104	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174355.8	1104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4936.24555935199	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432933	19430196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432896
ENSMUST00000174366.8	chr17	+	3275	20	FSM	ENSMUSG00000024422.15	ENSMUST00000174366.8	3275	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	390.40186696343	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGCATGGGAACTCTG	NA	False	NA	7	True	AATAAA	-14	NA	36190716	36203517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198315_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ENSMUST00000174372.3	chr4	+	2241	9	FSM	ENSMUSG00000028645.12	ENSMUST00000174372.3	2241	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_4	226.359779996359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	779	False	NA	36	True	TATAAA	-18	NA	118966110	118994527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ENSMUST00000174391.8	chr9	-	6257	11	FSM	ENSMUSG00000032423.13	ENSMUST00000174391.8	6257	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_10	258.93213396564	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGGAGTCCAAGAATT	NA	False	NA	-16	True	AATAAA	-28	NA	88364301	88331783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
ENSMUST00000174407.3	chr7	-	4069	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	65.4285021140549	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155150	42122809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
ENSMUST00000174418.8	chr15	+	4359	16	FSM	ENSMUSG00000039458.16	ENSMUST00000174418.8	4359	16	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	54.8326747680817	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTATTAGACTGAGTCAG	48	False	NA	NA	False	ATTAAA	-21	NA	12205189	12272205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ENSMUST00000174449.2	chr17	+	566	2	FSM	ENSMUSG00000024422.15	ENSMUST00000174449.2	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACAAGCAGTCATGGCA	7382	False	NA	NA	False	NA	NA	NA	36198827	36199545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36199095_36199246
ENSMUST00000174456.8	chr17	+	1595	4	FSM	ENSMUSG00000024462.18	ENSMUST00000174456.8	1595	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	13.0213499897497	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTGTAATTTGTCT	NA	False	NA	16	True	NA	NA	NA	37356919	37360359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312
ENSMUST00000174462.8	chr9	-	6283	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	12.7156399760295	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTTAATGTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-1	NA	20432713	20406363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
ENSMUST00000174470.2	chr17	+	608	2	FSM	ENSMUSG00000036036.16	ENSMUST00000174470.2	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAATGAGAGGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	37313468	37314584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37313670_37314177
ENSMUST00000174475.8	chr17	-	850	4	FSM	ENSMUSG00000015478.14	ENSMUST00000174475.8	850	4	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_3	37.7211994624891	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAATCCTTTGCTTTCCC	1109	False	NA	NA	False	NA	NA	NA	34822350	34820287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34820963_34821058_34821172_34821264_34821284_34822307
ENSMUST00000174477.8	chr7	+	2180	12	FSM	ENSMUSG00000015165.17	ENSMUST00000174477.8	2180	12	0	0	0	0	multi-exon	FALSE	canonical	3	4757	junction_7	501.59715158615	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	False	NA	7	True	AATAAA	-10	NA	28510361	28521665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUST00000174493.8	chr17	+	1254	7	FSM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	164.014989152415	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	17	True	AATAAA	-23	NA	35278076	35281071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
ENSMUST00000174501.8	chr1	+	3876	27	FSM	ENSMUSG00000048000.16	ENSMUST00000174501.8	3876	27	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	25.4826777224319	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCCGCTGTGCCAGC	408	False	NA	NA	False	NA	NA	NA	87282167	87376867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ENSMUST00000174510.8	chr10	+	2031	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_5	14.0427917452336	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTGTGTGGTGCTCA	90	False	NA	5	True	AATAAA	-18	NA	77458108	77481827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ENSMUST00000174513.8	chr5	-	4021	33	FSM	ENSMUSG00000060261.17	ENSMUST00000174513.8	4021	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	101.285907020362	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	688	False	NA	-12	True	AATAAA	-22	NA	134343547	134266696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343474
ENSMUST00000174514.2	chr19	+	669	3	FSM	ENSMUSG00000024856.11	ENSMUST00000174514.2	669	3	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	26.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTACTTCCCCATCCTC	7095	False	NA	NA	False	NA	NA	NA	4147400	4148465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4147508_4147816_4147918_4148004
ENSMUST00000174518.8	chr18	-	2109	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	0	2022	0	0	multi-exon	FALSE	canonical	3	60	junction_19	109.003545140448	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGGTTTGGTGAGTTTTT	2854	False	NA	-5	True	ATTAAA	-30	NA	56706023	56659815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
ENSMUST00000174524.8	chr17	+	1747	4	FSM	ENSMUSG00000036036.16	ENSMUST00000174524.8	1747	4	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_1	1178.31216388339	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTATTTGTTTTT	NA	False	NA	39	True	AATAAA	-44	NA	37313929	37321527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37314208_37315688_37315796_37316941_37317087_37320310
ENSMUST00000174545.9	chr14	-	8680	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	0	0	0	0	multi-exon	FALSE	canonical	2	168	junction_17	47.2351467755642	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGTTTGACCATGTG	NA	False	NA	-18	True	ACTAAA	-13	NA	57902887	57814977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ENSMUST00000174552.8	chr13	+	8023	37	FSM	ENSMUSG00000048264.17	ENSMUST00000174552.8	8023	37	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_2	7.00545422430901	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	NA	False	NA	26	True	AATAAA	-27	NA	9326563	9718964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_9327103_9543140_9543213_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ENSMUST00000174558.2	chr7	-	4073	4	FSM	ENSMUSG00000092225.2	ENSMUST00000174558.2	4073	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	34.9888871246603	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTCATTAGTAATTT	NA	False	NA	-14	True	AATAAA	-14	NA	42516658	42466252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_42470028_42471782_42471844_42472041_42472168_42516547
ENSMUST00000174561.8	chr3	+	810	5	FSM	ENSMUSG00000037894.14	ENSMUST00000174561.8	810	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	6290.0667921732	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	False	NA	-3	True	AATAAA	-12	NA	137570333	137572579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571840_137571902_137572146
ENSMUST00000174583.8	chr1	+	3015	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174583.8	3015	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	78.7922726047562	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCATTTCCTCGGATTAA	NA	False	NA	NA	False	NA	NA	NA	87254751	87285506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ENSMUST00000174586.8	chr4	-	6640	15	FSM	ENSMUSG00000028382.16	ENSMUST00000174586.8	6640	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	45.4889535817124	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTCTAACTGTGTAGT	-6	True	NA	-16	True	ATTAAA	-5	NA	59549295	59472047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59546148_59546183_59549147
ENSMUST00000174608.2	chr17	+	696	2	FSM	ENSMUSG00000042099.17	ENSMUST00000174608.2	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTATTGTGTGGATGGA	1645	False	NA	12	True	AATAAA	-15	NA	34041116	34041891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34041181_34041259
ENSMUST00000174609.9	chr17	-	527	5	FSM	ENSMUSG00000008668.16	ENSMUST00000174609.9	527	5	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_2	9115.60860557319	2667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174637	34170972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34171093_34171194_34171268_34171376_34171566_34174051_34174151_34174591
ENSMUST00000174620.3	chr17	-	974	4	FSM	ENSMUSG00000008668.16	ENSMUST00000174620.3	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	21077	junction_1	1022.38979302851	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCCGTCTCAGTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	34174627	34170975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051
ENSMUST00000174631.2	chr10	-	480	2	FSM	ENSMUSG00000059554.13	ENSMUST00000174631.2	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACACGCAGGTGTGTTT	2280	False	NA	-99	True	NA	NA	NA	18092083	18089522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_18089927_18092007
ENSMUST00000174651.2	chr12	-	1888	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	907	0	907	0	multi-exon	FALSE	canonical	3	96	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATCTTTGTATACAT	6397	False	NA	-23	True	AATAAA	-16	NA	102724024	102707990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102709654_102723799
ENSMUST00000174662.2	chr17	-	395	2	FSM	ENSMUSG00000008668.16	ENSMUST00000174662.2	395	2	0	0	0	0	multi-exon	FALSE	canonical	3	20050	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGGTCTGCAGAAGCTA	NA	False	NA	NA	False	NA	NA	NA	34174634	34173798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34174151_34174591
ENSMUST00000174663.8	chr12	+	2381	21	FSM	ENSMUSG00000071454.14	ENSMUST00000174663.8	2381	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	144.390581410285	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCTGTGTGTGTTCCTT	NA	False	NA	24	True	AAAAAG	-4	NA	3622469	3831395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3826058_3826110_3829618_3829655_3831105
ENSMUST00000174672.2	chr17	+	2597	3	FSM	ENSMUSG00000036036.16	ENSMUST00000174672.2	2597	3	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	286	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37314557	37321524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37315796_37316941_37317087_37320310
ENSMUST00000174674.3	chr6	-	1514	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGTCTCCAGTTGTC	7244	False	NA	-6	True	AAAACA	-20	NA	83047206	83045304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83046273_83046660
ENSMUST00000174685.8	chr2	+	3833	4	FSM	ENSMUSG00000038375.16	ENSMUST00000174685.8	740	4	0	-3093	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.8261413442938	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTGCCTCAGCTGAG	4067	False	NA	9	True	AATAAA	-21	NA	155223759	155231770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_155223938_155227209_155227385_155227920_155228090_155228459
ENSMUST00000174704.8	chr18	-	1789	18	FSM	ENSMUSG00000053644.14	ENSMUST00000174704.8	1789	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	101.074812129723	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGATAGGTTTGGTGA	NA	False	NA	-11	True	ATTAAA	-24	NA	56695290	56659821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675324_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ENSMUST00000174706.8	chr7	+	2119	8	FSM	ENSMUSG00000025495.16	ENSMUST00000174706.8	2119	8	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	19.06701393528	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGGCTGCTGGCTCTCT	6825	False	NA	NA	False	AATAAA	-21	NA	140711213	140734236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887
ENSMUST00000174710.2	chr7	-	1563	3	FSM	ENSMUSG00000002985.17	ENSMUST00000174710.2	514	3	-81	-968	57	0	multi-exon	FALSE	canonical	3	8700	junction_2	860.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19433056	19430196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19431573_19432112_19432179_19432935
ENSMUST00000174711.8	chr17	-	520	4	FSM	ENSMUSG00000036398.14	ENSMUST00000174711.8	520	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	334.250737554243	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGCCTCCGTTCTCCT	NA	False	NA	-15	True	AATATA	-23	NA	37262633	37260181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_37260447_37260768_37260878_37262314_37262401_37262573
ENSMUST00000174716.8	chr1	-	3064	19	FSM	ENSMUSG00000037470.15	ENSMUST00000174716.8	3064	19	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_12	108.960747264528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36283188	36217685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250477_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ENSMUST00000174745.8	chr17	-	536	4	FSM	ENSMUSG00000008668.16	ENSMUST00000174745.8	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	21077	junction_1	1022.38979302851	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGTCTCAGTTTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	34174186	34170972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051
ENSMUST00000174755.8	chr7	+	2426	6	FSM	ENSMUSG00000015165.17	ENSMUST00000174755.8	2426	6	0	0	0	0	multi-exon	FALSE	canonical	3	5544	junction_4	444.492249651217	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAATAAAAAATTAAACCA	NA	False	NA	NA	False	NA	NA	NA	28510364	28516361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704
ENSMUST00000174779.8	chr17	-	632	5	FSM	ENSMUSG00000024387.14	ENSMUST00000174779.8	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	44.5028089001133	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTCTCCTACTGTGT	NA	False	NA	-9	True	AATAAA	-15	NA	35338751	35335173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729
ENSMUST00000174799.2	chr19	+	843	4	FSM	ENSMUSG00000024856.11	ENSMUST00000174799.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	272.140078309356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTCAGCCTTTCTGTG	7096	False	NA	27	True	AATAAA	-16	NA	4147401	4149010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4147508_4147816_4147908_4148004_4148138_4148497
ENSMUST00000174806.9	chr9	-	3082	29	FSM	ENSMUSG00000032422.19	ENSMUST00000174806.9	3082	29	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	53.7773542165344	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTAGGTATTACGGCC	NA	False	NA	-19	True	AATAAA	-23	NA	88320967	88258819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUST00000174818.8	chr8	+	2493	6	FSM	ENSMUSG00000031562.17	ENSMUST00000174818.9	2493	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	146.129531580718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACGTGTTTGCTTTTATA	NA	False	NA	8	True	ATTAAA	-14	NA	48563196	48594698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591213_48591914_48593377
ENSMUST00000174819.8	chr4	+	1343	4	FSM	ENSMUSG00000028797.21	ENSMUST00000174819.8	652	4	12	-703	0	0	multi-exon	FALSE	canonical	3	97	junction_2	255.064697674923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3203	False	NA	16	True	AATAAA	-16	NA	129494499	129502321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_129494525_129494775_129494928_129500879_129500973_129501248
ENSMUST00000174822.8	chr11	-	3337	32	FSM	ENSMUSG00000057948.13	ENSMUST00000174822.8	3337	32	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	7.27117096203969	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCCTGTGTAACACAGG	NA	False	NA	NA	False	NA	NA	NA	115968416	115953463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960712_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
ENSMUST00000174824.2	chr17	-	464	3	FSM	ENSMUSG00000024446.14	ENSMUST00000174824.2	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_2	31	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCAGTGGTAAGGAAAG	NA	False	NA	NA	False	NA	NA	NA	36568747	36566835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36566962_36568333_36568599_36568674
ENSMUST00000174833.2	chr8	-	2934	3	FSM	ENSMUSG00000035569.18	ENSMUST00000174833.2	2934	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	9.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACCTTCGTTATGG	NA	False	NA	NA	False	NA	NA	NA	123701512	123632801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123635546_123642639_123642785_123701467
ENSMUST00000174843.8	chr18	+	4370	3	FSM	ENSMUSG00000025880.12	ENSMUST00000174843.8	793	3	-1628	-1949	-167	0	multi-exon	FALSE	canonical	3	56	junction_2	848	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGTTGTTCAGAGCTT	NA	False	NA	19	True	ATTAAA	-24	NA	75500432	75529006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75502640_75503965_75504020_75526897
ENSMUST00000174846.8	chr1	+	2957	4	FSM	ENSMUSG00000048000.16	ENSMUST00000174846.8	995	4	32	-1994	0	-68	multi-exon	FALSE	canonical	3	15	junction_3	89.5408038581046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTTTTCAGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	87254751	87285438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282692
ENSMUST00000174857.8	chr10	+	2865	3	FSM	ENSMUSG00000020185.17	ENSMUST00000174857.8	2865	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCGTTTTCTTTTCATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	110581325	110592498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_110581541_110582192_110582286_110589941
ENSMUST00000174860.8	chr17	+	691	4	FSM	ENSMUSG00000007050.18	ENSMUST00000174860.8	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	1479	junction_1	117.83132954449	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGGATGCAGCAAGGAA	283	False	NA	NA	False	NA	NA	NA	35201144	35204473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUST00000174864.2	chr5	+	787	3	FSM	ENSMUSG00000092354.8	ENSMUST00000174864.2	787	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	52	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGGGCTCGGGGTGTTC	NA	False	NA	-77	True	AAAACA	-15	NA	101985317	101992106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_101985425_101989616_101989940_101991749
ENSMUST00000174874.8	chr11	-	5451	15	FSM	ENSMUSG00000020173.18	ENSMUST00000174874.8	5451	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	138.383838415813	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12362144	12186677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12362030
ENSMUST00000174882.8	chr7	+	1850	13	FSM	ENSMUSG00000015165.17	ENSMUST00000174882.8	1850	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_6	2150.9690451825	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGCTGGGGCTCCAAG	NA	False	NA	16	True	AATAAA	-19	NA	28512769	28521674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUST00000174924.4	chr12	-	300	1	FSM	ENSMUSG00000118841.1	ENSMUST00000174924.4	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTCTATCCCTCACT	NA	False	NA	NA	False	NA	NA	NA	69408255	69407955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69408000_69408300
ENSMUST00000175032.4	chr12	+	300	1	FSM	ENSMUSG00000118866.1	ENSMUST00000175032.4	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGACACTTAATAATATT	8842	False	NA	NA	False	NA	NA	NA	69206068	69206368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69206100_69206400
ENSMUST00000175096.3	chr14	-	319	1	FSM	ENSMUSG00000092837.3	ENSMUST00000175096.3	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTGATCGAGATCC	5444	False	NA	NA	False	NA	NA	NA	51045224	51044905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51044900_51045200
ENSMUST00000175548.3	chr17	+	85	1	FSM	ENSMUSG00000093289.3	ENSMUST00000175548.3	85	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCACCCCTTTAGAAAT	NA	False	NA	NA	False	NA	NA	NA	71938275	71938360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_71938300_71938400
ENSMUST00000175573.3	chr19	-	76	1	FSM	ENSMUSG00000093314.3	ENSMUST00000175573.3	76	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGTAGATCCTCCTT	NA	False	NA	NA	False	NA	NA	NA	8866138	8866062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8866100_8866100
ENSMUST00000175580.3	chr5	+	71	1	FSM	ENSMUSG00000118905.1	ENSMUST00000175580.3	71	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAACAGGCAGGAATTTA	NA	False	NA	NA	False	NA	NA	NA	24057207	24057278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24057200_24057300
ENSMUST00000175652.2	chr12	-	1227	3	FSM	ENSMUSG00000041359.15	ENSMUST00000175652.2	535	3	56	-748	0	0	multi-exon	FALSE	canonical	3	551	junction_2	399	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCTCTTGGAATTATG	NA	False	NA	-2	True	AATAAA	-23	NA	105188996	105183008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_105183961_105184481_105184552_105188791
ENSMUST00000175654.2	chr7	+	1362	3	FSM	ENSMUSG00000093913.2	ENSMUST00000175654.2	1362	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGTGAAACCCAGCAAC	NA	False	NA	NA	False	NA	NA	NA	15176922	15178861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_15177140_15177265_15177466_15177916
ENSMUST00000175668.2	chr17	+	385	2	FSM	ENSMUSG00000093622.2	ENSMUST00000175668.2	385	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAGAAAATTTTAAATAAA	280	False	NA	-4	True	ATTAAA	-8	NA	71141658	71143039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_71141798_71142793
ENSMUST00000175674.2	chr14	-	1930	1	FSM	ENSMUSG00000093726.2	ENSMUST00000175674.2	1930	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTCCTGTGTCTGGGCCTT	NA	False	NA	-2	True	NA	NA	NA	67912555	67910625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67910600_67912600
ENSMUST00000175689.8	chr13	-	723	7	FSM	ENSMUSG00000006715.12	ENSMUST00000175689.8	723	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	596.377513735125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCTAGGCCGTGTACAT	NA	False	NA	NA	False	NA	NA	NA	24945459	24936073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945342
ENSMUST00000175714.8	chr15	+	1953	9	FSM	ENSMUSG00000009585.19	ENSMUST00000175714.8	1953	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_5	144.740284648055	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTTGTGCATGATTG	8246	False	NA	6	True	NA	NA	NA	79776603	79792119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUST00000175726.8	chr19	-	7524	8	FSM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	4.32364170012044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCATGATTTCATTACTT	4402	False	NA	0	True	AATAAA	-23	NA	29782907	29691801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ENSMUST00000175726.8-0	chr19	-	7095	8	FSM	ENSMUSG00000046138.16	ENSMUST00000175726.8	7524	8	-482	911	0	0	multi-exon	FALSE	canonical	3	13	junction_4	4.32364170012044	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	3920	False	NA	0	True	AATAAA	-14	NA	29783389	29692712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ENSMUST00000175737.2	chr11	+	1365	3	FSM	ENSMUSG00000048277.16	ENSMUST00000175737.2	785	3	-29	-551	0	0	multi-exon	FALSE	canonical	3	9	junction_2	289.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGCTGGGTGGCGC	NA	False	NA	14	True	AATAAA	-14	NA	117700508	117705109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_117700630_117703284_117703523_117704103
ENSMUST00000175741.8	chr11	-	2337	4	FSM	ENSMUSG00000018733.11	ENSMUST00000175741.8	2337	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.4112770527204	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGACTTCTTGAAGTTT	2473	False	NA	-7	True	AATAAA	-16	NA	83189721	83185900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189542
ENSMUST00000175752.8	chr15	+	1977	8	FSM	ENSMUSG00000009585.19	ENSMUST00000175752.8	1977	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	224.554434107971	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCCCTCACCCATCAGA	8291	False	NA	NA	False	AATAAA	-15	NA	79776648	79792287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUST00000175758.8	chr9	+	1445	6	FSM	ENSMUSG00000034252.15	ENSMUST00000175758.8	1445	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_5	15.3153517752613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	80043654	80051453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUST00000175764.9	chr19	-	4678	4	FSM	ENSMUSG00000046138.16	ENSMUST00000175764.9	4678	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.2644968324772	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGTTTGAATACCAT	NA	False	NA	0	True	AATAAA	-14	NA	29721012	29692712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29720932
ENSMUST00000175765.8	chr9	-	4589	7	FSM	ENSMUSG00000032041.16	ENSMUST00000175765.8	4589	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	28.2665880502051	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTTTCATCTTTTAA	7614	False	NA	NA	False	NA	NA	NA	35111587	35095846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111460
ENSMUST00000175776.8	chr4	+	2802	25	FSM	ENSMUSG00000028552.14	ENSMUST00000175776.8	2802	25	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	34.7439043414653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTATCTGTCCTTTGTC	NA	False	NA	NA	False	NA	NA	NA	109137608	109242662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ENSMUST00000175776.8-1	chr4	+	5298	25	FSM	ENSMUSG00000028552.14	ENSMUST00000175776.8	2802	25	-144	-2352	0	0	multi-exon	FALSE	canonical	3	25	junction_9	34.7439043414653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137464	109245014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178523_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ENSMUST00000175779.8	chr3	+	3065	22	FSM	ENSMUSG00000028059.17	ENSMUST00000175779.8	3065	22	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	34.6253678648075	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTGAAGAACATTAGTAAA	9768	False	NA	-25	True	NA	NA	NA	88523823	88554202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000175783.3	chr18	-	4597	2	FSM	ENSMUSG00000046982.12	ENSMUST00000175783.3	4597	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCAAATGTTGGATTCT	NA	False	NA	NA	False	NA	NA	NA	84104576	84030206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_84034367_84104139
ENSMUST00000175793.8	chr15	-	4314	30	FSM	ENSMUSG00000022377.17	ENSMUST00000175793.8	4314	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	34.1321137502593	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64221735	63960389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64025692_64025702_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676
ENSMUST00000175799.8	chr15	-	4237	29	FSM	ENSMUSG00000022377.17	ENSMUST00000175799.8	4237	29	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_27	27.267640798094	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCTTGTTTCTGGTC	NA	False	NA	-3	True	ATTAAA	-20	NA	64254605	63960389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ENSMUST00000175805.9	chr15	-	4839	3	FSM	ENSMUSG00000022361.15	ENSMUST00000175805.9	4839	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGAGTGATTTTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	57939641	57910398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_57912182_57915619_57918544_57939509
ENSMUST00000175806.9	chr17	+	4426	12	FSM	ENSMUSG00000006705.14	ENSMUST00000175806.9	2170	12	-55	-2201	0	0	multi-exon	FALSE	canonical	3	29	junction_2	48.0870422916989	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGATTCTGTAAAGCTT	NA	False	NA	29	True	ATTAAA	-22	NA	31783780	31826667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUST00000175820.8	chr9	+	3210	7	FSM	ENSMUSG00000038884.15	ENSMUST00000175820.8	3210	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	23.9704679414761	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	False	NA	19	True	AATAAA	-28	NA	20779953	20785603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ENSMUST00000175821.8	chr13	-	4479	4	FSM	ENSMUSG00000048280.19	ENSMUST00000175821.8	652	4	0	-3827	0	3827	multi-exon	FALSE	canonical	3	10	junction_1	5.09901951359278	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67831635	67815558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67819731_67821116_67821213_67821680_67821808_67831551
ENSMUST00000175858.10	chr15	-	4948	5	FSM	ENSMUSG00000022421.21	ENSMUST00000175858.10	4948	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	7.59522876548166	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCTCTTCTGTCATAT	NA	False	NA	-2	True	AATAAA	-16	NA	79688910	79670552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
ENSMUST00000175860.2	chr3	+	492	1	FSM	ENSMUSG00000093392.2	ENSMUST00000175860.2	492	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCTTTTGACTTGCGG	5895	False	NA	NA	False	NA	NA	NA	122050376	122050868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_122050400_122050900
ENSMUST00000175883.8	chr9	+	2505	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	106.419462697461	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCCCCGCATGGAAAATC	NA	False	NA	65	True	NA	NA	NA	102712115	102784741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ENSMUST00000175885.8	chr2	-	2264	17	FSM	ENSMUSG00000034906.16	ENSMUST00000175885.8	2264	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	114.234938148318	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCATTTCTCCATAGCC	NA	False	NA	-88	True	NA	NA	NA	126975822	126945869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126975768
ENSMUST00000175926.8	chr9	+	2303	15	FSM	ENSMUSG00000032058.15	ENSMUST00000175926.8	2303	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	205.910583427241	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATGTGGAAGGCTAACG	29	False	NA	NA	False	NA	NA	NA	50768278	50791707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772592_50772765_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUST00000175934.8	chr18	-	4595	26	FSM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	0	0	0	0	multi-exon	FALSE	canonical	2	549	junction_9	234.649375878139	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982001	60946826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUST00000175939.2	chr13	-	780	4	FSM	ENSMUSG00000021546.19	ENSMUST00000175939.2	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	6496	junction_3	612.864494720398	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTAATCTTGGCAATC	4765	False	NA	NA	False	NA	NA	NA	58550316	58546539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000175940.2	chr8	-	2890	4	FSM	ENSMUSG00000046691.15	ENSMUST00000175940.2	2890	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	147.606082379947	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTGTCGCTCCATTT	NA	False	NA	-31	True	AATAAA	-13	NA	107619847	107610525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107619764
ENSMUST00000175979.2	chr10	-	2391	3	FSM	ENSMUSG00000039166.17	ENSMUST00000175979.2	2391	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	False	NA	0	True	AATAAA	-19	NA	25114615	25044987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_25047147_25096508_25096657_25114531
ENSMUST00000175980.8	chr8	+	1014	3	FSM	ENSMUSG00000001909.17	ENSMUST00000175980.8	1014	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	280.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGTGAGGTACGGGCC	NA	False	NA	NA	False	AATGAA	-44	NA	85412935	85417565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85413329_85416336_85416538_85417145
ENSMUST00000175999.8	chr9	+	4706	23	FSM	ENSMUSG00000034252.15	ENSMUST00000175999.8	4706	23	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	83.8945126703669	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGTTCTCTTTAATTG	NA	False	NA	NA	False	AGTAAA	-14	NA	79974380	80052063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUST00000176013.8	chr19	+	2106	10	FSM	ENSMUSG00000010110.18	ENSMUST00000176013.8	2106	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	59.188545772111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	7024	False	NA	12	True	NA	NA	NA	8719251	8733006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8719862_8720217_8720289_8720443_8720500_8720716_8720867_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUST00000176015.5	chr5	+	980	7	FSM	ENSMUSG00000029223.13	ENSMUST00000176015.5	980	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	35.4479273802511	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCTGGTTTTTATTTT	NA	False	NA	28	True	AATAAA	-17	NA	66834234	66844572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUST00000176016.2	chr11	+	471	2	FSM	ENSMUSG00000093483.2	ENSMUST00000176016.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTATTTGTTTGGGTAA	5892	False	NA	8	True	ATTAAA	-17	NA	83182568	83185456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83182924_83185340
ENSMUST00000176047.8	chr4	+	2330	9	FSM	ENSMUSG00000028710.19	ENSMUST00000176047.8	2330	9	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCACACCCCCACACAC	NA	False	NA	NA	False	NA	NA	NA	115642010	115669511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ENSMUST00000176047.8-0	chr4	+	1717	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	0	443	0	0	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGCTGATGAATCACTA	NA	False	NA	-48	True	NA	NA	NA	115642180	115669068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ENSMUST00000176071.8	chr7	+	773	4	FSM	ENSMUSG00000019737.15	ENSMUST00000176071.8	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	25.4863798048204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGGACCAGGACTTGGA	NA	False	NA	NA	False	NA	NA	NA	30014309	30016285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997
ENSMUST00000176086.8	chr17	-	2687	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176086.8	2687	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_19	106.585693223809	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746864	24727823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738087_24738221_24746739
ENSMUST00000176102.8	chr12	-	2707	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176102.8	2707	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTGTTTCCAAAGGGT	NA	False	NA	NA	False	NA	NA	NA	76403914	76394555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_76397048_76402662_76402843_76403879
ENSMUST00000176149.9	chr8	+	3938	20	FSM	ENSMUSG00000011832.17	ENSMUST00000176149.9	3938	20	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	7.46144290294483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCCGAATAGAGAGCCA	NA	False	NA	7	True	AATAAA	-22	NA	4216566	4258051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ENSMUST00000176172.8	chr5	-	4882	24	FSM	ENSMUSG00000029705.18	ENSMUST00000176172.8	4882	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	48.958413740566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTACCCTGAAGTGTTTT	NA	False	NA	NA	False	AAGAAA	-24	NA	136594286	136303339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136338600_136338703_136340348_136340415_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136594233
ENSMUST00000176200.8	chr10	-	586	2	FSM	ENSMUSG00000063320.12	ENSMUST00000176200.8	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTACTATACATTCTTGG	NA	False	NA	0	True	NA	NA	NA	82458760	82455684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82456052_82458541
ENSMUST00000176207.8	chr13	-	2653	15	FSM	ENSMUSG00000021546.19	ENSMUST00000176207.8	2653	15	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_9	1988.3049647006	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGAAAAAGTTCC	4618	False	NA	-121	True	NA	NA	NA	58550463	58539150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000176207.8-0	chr13	-	1907	15	FSM	ENSMUSG00000021546.19	ENSMUST00000176207.8	2653	15	133	613	0	0	multi-exon	FALSE	canonical	3	308	junction_9	1988.3049647006	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000176215.2	chr17	+	477	1	FSM	ENSMUSG00000093565.2	ENSMUST00000176215.2	477	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTTTCAGACGTTGT	4783	False	NA	13	True	AATAAA	-16	NA	24747240	24747717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24747200_24747700
ENSMUST00000176216.9	chr5	-	2821	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176216.9	2821	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	19.9470373118581	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596102	136276988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ENSMUST00000176242.9	chr3	-	3985	24	FSM	ENSMUSG00000027699.20	ENSMUST00000176242.9	3985	24	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_21	183.743194259469	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTATGTGTCCTGTCA	1834	False	NA	NA	False	AATAAA	-19	NA	27208003	27151371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207865
ENSMUST00000176262.8	chr19	+	3933	10	FSM	ENSMUSG00000045098.20	ENSMUST00000176262.8	3933	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	99.7442408374885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGTGTAAGCACTGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	3818165	3866688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
ENSMUST00000176262.8-0	chr19	+	5545	10	FSM	ENSMUSG00000045098.20	ENSMUST00000176262.8	3933	10	3	-1615	0	0	multi-exon	FALSE	canonical	3	16	junction_3	99.7442408374885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3818168	3868303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
ENSMUST00000176274.2	chr15	-	1854	4	FSM	ENSMUSG00000053929.18	ENSMUST00000176274.2	1854	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	196.445638508186	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCTGTGTGTCTGCTT	NA	False	NA	-1	True	AATAAA	-24	NA	76541120	76531126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76531969_76532298_76532511_76533140_76533380_76540559
ENSMUST00000176278.8	chr12	-	1672	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	3	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTATGAGCTTTTCTATA	NA	False	NA	-2	True	ATTAAA	-16	NA	76416376	76395718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_76397048_76402662_76402843_76416213
ENSMUST00000176289.8	chr2	-	2310	14	FSM	ENSMUSG00000040434.17	ENSMUST00000176289.8	2310	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	44.6240044723457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGTGTGAGTGTTTT	NA	False	NA	-6	True	GGGGCT	-42	NA	92201356	92195396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200910_92201009_92201083_92201239_92201325
ENSMUST00000176304.8	chr7	+	1006	7	FSM	ENSMUSG00000019737.15	ENSMUST00000176304.8	1006	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	73.2385751423994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014340	30018471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30017392_30017468_30018097_30018157_30018248
ENSMUST00000176308.2	chr4	+	812	4	FSM	ENSMUSG00000029064.16	ENSMUST00000176308.2	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	3030	junction_3	298.531219286843	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCTGTGCTGTAAACTA	7127	False	NA	-43	True	NA	NA	NA	155637680	155642110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUST00000176333.2	chr7	-	489	2	FSM	ENSMUSG00000047649.10	ENSMUST00000176333.2	489	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTGAGCAACCCGGAA	2156	False	NA	NA	False	NA	NA	NA	19093408	19092763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19093157_19093312
ENSMUST00000176353.8	chr17	-	2503	20	FSM	ENSMUSG00000052752.16	ENSMUST00000176353.8	2503	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_16	139.813924621282	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746820	24727823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ENSMUST00000176381.8	chr19	+	2251	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGGAAGCAGGTGAATT	6549	False	NA	NA	False	ATTAAA	-19	NA	8718776	8733433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUST00000176381.8-0	chr19	+	1824	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	0	427	0	0	multi-exon	FALSE	canonical	3	140	junction_1	18.8417090519942	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	6549	False	NA	12	True	NA	NA	NA	8718776	8733006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUST00000176416.8	chr9	+	1486	12	FSM	ENSMUSG00000032010.16	ENSMUST00000176416.8	1486	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2626765016321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTCAGAAAAAAAAAAAAA	2259	False	NA	NA	False	NA	NA	NA	43996246	44005223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_43996633_44000437_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ENSMUST00000176430.8	chr11	+	3596	21	FSM	ENSMUSG00000035152.15	ENSMUST00000176430.8	3596	21	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_14	47.0604664235279	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGACAAAAACAAAAAGC	2210	False	NA	NA	False	NA	NA	NA	83193559	83289423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580
ENSMUST00000176464.8	chr12	+	2832	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	195	1407	0	0	multi-exon	FALSE	canonical	3	371	junction_5	45.1017752679996	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	10	True	AATAAA	-18	NA	59178266	59236962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUST00000176498.2	chr7	-	901	3	FSM	ENSMUSG00000030879.11	ENSMUST00000176498.2	459	3	0	-442	0	334	multi-exon	FALSE	canonical	1	9	junction_2	1150.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTACCTCCTGGCTCAGTT	NA	False	NA	-7	True	NA	NA	NA	105460206	105458529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105459352_105459656_105459726_105460196
ENSMUST00000176500.8	chr3	+	4492	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	58.4462916553691	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	9394	False	NA	15	True	ATTAAA	-17	NA	88523449	88555359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000176505.8	chr5	+	3207	8	FSM	ENSMUSG00000029647.16	ENSMUST00000176505.8	3207	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_7	11.4107003129805	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAACTTGTATTTCTG	NA	False	NA	NA	False	AATAAA	-9	NA	147466542	147485298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ENSMUST00000176510.2	chr14	+	4315	3	FSM	ENSMUSG00000035067.10	ENSMUST00000176510.2	4315	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAAATTTTTTTTGGT	9026	False	NA	18	True	AATAAA	-31	NA	63844123	63903631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_63844734_63898268_63898376_63900033
ENSMUST00000176510.2-0	chr14	+	1175	3	FSM	ENSMUSG00000035067.10	ENSMUST00000176510.2	4315	3	-307	3447	-135	-74	multi-exon	FALSE	canonical	2	12	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACACTTGTAAGGTGAC	8719	False	NA	NA	False	AATAAA	-15	NA	63843816	63900184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_63844734_63898268_63898376_63900033
ENSMUST00000176511.8	chr13	+	2703	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	19.7949488506538	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	12	True	ATTAAA	-16	NA	22129263	22144655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ENSMUST00000176518.2	chr11	-	2501	3	FSM	ENSMUSG00000018733.11	ENSMUST00000176518.2	2501	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGACTTCTTGAAGTT	2471	False	NA	-8	True	AATAAA	-15	NA	83189723	83185901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_83187267_83188313_83188868_83189141
ENSMUST00000176531.8	chr9	-	2310	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	12.2031416719903	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7977	False	NA	NA	False	NA	NA	NA	35111224	35098080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ENSMUST00000176536.2	chr7	+	1079	3	FSM	ENSMUSG00000019737.15	ENSMUST00000176536.2	1079	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	17.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGATGTCTGAGAATATC	NA	False	NA	5	True	ATTAAA	-12	NA	30016664	30018465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30017468_30018097_30018157_30018248
ENSMUST00000176545.2	chr11	+	356	3	FSM	ENSMUSG00000093483.2	ENSMUST00000176545.2	356	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	166	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTATTTGTTTGGGTAAGA	5869	False	NA	10	True	ATTAAA	-19	NA	83182545	83185458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83182660_83182799_83182924_83185340
ENSMUST00000176557.8	chr9	+	1898	8	FSM	ENSMUSG00000032336.18	ENSMUST00000176557.8	1898	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	135.42570822772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	16	False	NA	NA	False	AATAAA	-16	NA	58489688	58560161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557791_58557802_58558540_58558616_58559141
ENSMUST00000176596.8	chr5	+	4152	18	FSM	ENSMUSG00000029647.16	ENSMUST00000176596.8	4152	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	41.0240034386149	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147390098	147485306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147390129_147391927_147391999_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ENSMUST00000176600.8	chr5	+	5541	19	FSM	ENSMUSG00000029647.16	ENSMUST00000176600.8	5541	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	42.4659631315641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTCTGTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	147367262	147485306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ENSMUST00000176607.8	chr9	+	3319	18	FSM	ENSMUSG00000034252.15	ENSMUST00000176607.8	3319	18	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	33.6390364767855	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAAAGAGAAGAAAT	6228	False	NA	NA	False	NA	NA	NA	80010453	80050994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUST00000176610.9	chr19	-	2065	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	26.5722156514676	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGTGTCTATGCTCGTG	9901	False	NA	-3	True	AATAAA	-14	NA	8763680	8751855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ENSMUST00000176618.2	chr15	-	1234	2	FSM	ENSMUSG00000093394.2	ENSMUST00000176618.2	1234	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCCAATGTGTGACAGT	NA	False	NA	-3	True	NA	NA	NA	88775719	88773982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_88775099_88775601
ENSMUST00000176625.8	chr16	+	876	5	FSM	ENSMUSG00000005982.15	ENSMUST00000176625.8	876	5	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_1	55.2285026050861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCCCATCAGCCTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	3702522	3719912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3702671_3715114_3715245_3717735_3717833_3718506_3718742_3719646
ENSMUST00000176630.8	chr18	-	4529	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	0	0	0	0	multi-exon	FALSE	canonical	2	677	junction_9	198.19802369656	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982043	60946826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUST00000176636.5	chr9	-	2522	13	FSM	ENSMUSG00000032015.17	ENSMUST00000176636.5	2522	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_12	13.5359603361646	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGTTCAGAGGAGTG	NA	False	NA	NA	False	CATAAA	-17	NA	43117052	43035233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_43036426_43038610_43038753_43040172_43040240_43045773_43045936_43048589_43048727_43050610_43050753_43051114_43051298_43054009_43054093_43056515_43056619_43058106_43058212_43087582_43087618_43110326_43110396_43116950
ENSMUST00000176637.2	chr4	+	2832	10	FSM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_9	969.739191105233	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGTGTGATGGTTAT	2379	False	NA	25	True	AATAAA	-17	NA	155611909	155643724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUST00000176639.8	chr15	-	6057	4	FSM	ENSMUSG00000053411.17	ENSMUST00000176639.8	6057	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	126.212343118871	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGACTTCTGTGTGTC	NA	False	NA	-13	True	ATTAAA	-18	NA	79816969	79800013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUST00000176663.8	chr9	-	4107	16	FSM	ENSMUSG00000037112.17	ENSMUST00000176663.8	4107	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	10.4796098315835	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGGTACTCTTTTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	50920236	50804100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ENSMUST00000176668.8	chr17	-	2667	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176668.8	2667	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	106.150647666418	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746824	24727823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733841_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ENSMUST00000176670.8	chr10	-	2227	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	4515	False	NA	-12	True	AATAAA	-13	NA	117212834	117184946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000176670.8-0	chr10	-	6640	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	-44	-4369	0	0	multi-exon	FALSE	canonical	3	61	junction_6	215.998518513438	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATACTTTGCAGTTTGTT	4471	False	NA	-12	True	AATAAA	-13	NA	117212878	117180577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000176683.8	chr10	-	437	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176683.8	437	4	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_3	9065.73447413697	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTACGTGTTTTTTT	NA	False	NA	-18	True	AATAAA	-29	NA	128385031	128383982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128384299_128384526_128384550_128384817_128384841_128384956
ENSMUST00000176685.8	chr9	-	1783	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176685.8	1783	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	13.6065752079239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATGTCATTAAAAA	7935	False	NA	NA	False	NA	NA	NA	35111266	35098639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111152
ENSMUST00000176686.8	chr10	-	2200	10	FSM	ENSMUSG00000055531.13	ENSMUST00000176686.8	2200	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	212.334001975806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTAAAGCTGTTCACGT	4471	False	NA	-9	True	AATAAA	-16	NA	117212878	117184943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117185407_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000176686.8-0	chr10	-	4019	10	FSM	ENSMUSG00000055531.13	ENSMUST00000176686.8	2200	10	0	-1819	0	1819	multi-exon	FALSE	canonical	3	23	junction_1	212.334001975806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTGTCAAAGCCCTTC	4471	False	NA	66	True	AGTAAA	-20	NA	117212878	117183124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117185407_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000176701.4	chr17	+	1778	10	FSM	ENSMUSG00000006705.14	ENSMUST00000176701.4	1778	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	24.0174833438651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTCTGCAGTTGCAAT	NA	False	NA	NA	False	NA	NA	NA	31802517	31824196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUST00000176744.2	chr7	-	380	2	FSM	ENSMUSG00000093405.2	ENSMUST00000176744.2	380	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCCCAGACTGGTAC	NA	False	NA	NA	False	NA	NA	NA	65511740	65510753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_65510986_65511592
ENSMUST00000176745.8	chr5	-	2831	23	FSM	ENSMUSG00000029705.18	ENSMUST00000176745.8	2831	23	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	14.4244970693081	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596118	136276988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ENSMUST00000176758.3	chr12	-	3598	1	FSM	ENSMUSG00000079036.11	ENSMUST00000176758.3	3598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGGTTATATGTGCCT	996	False	NA	NA	False	AAAAAG	-45	NA	87476207	87472609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87472600_87476200
ENSMUST00000176774.8	chr2	-	2377	15	FSM	ENSMUSG00000040434.17	ENSMUST00000176774.8	2377	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	41.8854731039636	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGAGTGTTTTGTCTGT	NA	False	NA	0	True	NA	NA	NA	92201331	92195390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92199718_92199834_92200007_92200204_92200329_92200521_92200605_92200907_92201009_92201083_92201239_92201325
ENSMUST00000176777.8	chr8	-	944	8	FSM	ENSMUSG00000034799.17	ENSMUST00000176777.8	944	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	16.3682120998886	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTATATATAACAAGTTG	NA	False	NA	3	True	NA	NA	NA	72124385	72112984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_72113294_72114462_72114496_72115124_72115180_72115483_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72124269
ENSMUST00000176787.2	chr9	-	1449	4	FSM	ENSMUSG00000032570.18	ENSMUST00000176787.2	1449	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	180.31638860625	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGAAAAACTAATTT	NA	False	NA	NA	False	ATTAAA	-41	NA	105372304	105346305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_105347347_105370741_105370754_105371613_105371797_105372091
ENSMUST00000176804.8	chr3	+	3086	22	FSM	ENSMUSG00000028059.17	ENSMUST00000176804.8	3086	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	81.2162925021849	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACACTTCCCCCACCCC	NA	False	NA	-57	True	NA	NA	NA	88528431	88554170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540812_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000176824.8	chr9	-	5369	15	FSM	ENSMUSG00000037112.17	ENSMUST00000176824.8	5369	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	8.64875831597596	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGGTACTCTTTTAT	NA	False	NA	NA	False	AAAAAG	-6	NA	50920236	50804100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ENSMUST00000176825.3	chr8	+	3728	19	FSM	ENSMUSG00000011832.17	ENSMUST00000176825.3	3728	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	6.86285402963656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGATGCCGAATAGAG	NA	False	NA	2	True	AATAAA	-17	NA	4216738	4258046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ENSMUST00000176828.8	chr2	+	4355	12	FSM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	12.5901706380102	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGGAAGAAAGCAAATCTA	4433	False	NA	NA	False	NA	NA	NA	4564566	4617395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ENSMUST00000176834.8	chr11	-	620	3	FSM	ENSMUSG00000034120.19	ENSMUST00000176834.8	620	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	811.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATGTGTCCTGGTCTTT	7011	False	NA	-10	True	ATTAAA	-26	NA	116742912	116740731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116741180_116741681_116741788_116742846
ENSMUST00000176875.4	chr10	-	2025	1	FSM	ENSMUSG00000075046.8	ENSMUST00000176875.4	2025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTGACAGTACCTCTTG	NA	False	NA	NA	False	NA	NA	NA	58068497	58066472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_58066500_58068500
ENSMUST00000176896.8	chr9	+	1906	8	FSM	ENSMUSG00000032336.18	ENSMUST00000176896.8	841	8	-149	-916	0	0	multi-exon	FALSE	canonical	3	20	junction_5	128.573492046933	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGAATAATACTCTTTA	537	False	NA	NA	False	AATAAA	-16	NA	58489574	58560161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58550968_58557779_58557802_58558540_58558616_58559141
ENSMUST00000176906.2	chr10	-	509	3	FSM	ENSMUSG00000093674.8	ENSMUST00000176906.2	509	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7652	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACTGCTGTTACGTGT	NA	False	NA	-24	True	AATAAA	-23	NA	128384971	128383988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128384321_128384526_128384550_128384817
ENSMUST00000176921.2	chr17	+	298	2	FSM	ENSMUSG00000093565.2	ENSMUST00000176921.2	298	2	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCAGACGTTGTG	4764	False	NA	14	True	AATAAA	-17	NA	24747221	24747718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24747411_24747609
ENSMUST00000176922.8	chr13	-	3780	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	6.36396103067893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATCTGTTACAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	8921059	8900515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ENSMUST00000176923.9	chr17	-	5962	41	FSM	ENSMUSG00000073434.13	ENSMUST00000176923.9	5962	41	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_38	17.4845646214025	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGTTTTATTGTCCCA	9808	False	NA	NA	False	AATAAA	-22	NA	26080475	26063745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ENSMUST00000176939.8	chr19	-	3427	19	FSM	ENSMUSG00000025007.14	ENSMUST00000176939.8	3427	19	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_12	241.939820085925	2554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576813	40538700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUST00000176957.8	chr14	+	1117	9	FSM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	425.971756692859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAATTGTTATTTT	NA	False	NA	13	True	AATAAA	-14	NA	74969823	74987288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_74969962_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUST00000176965.2	chr7	+	664	2	FSM	ENSMUSG00000019737.15	ENSMUST00000176965.2	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTCACTGACCAGCCG	NA	False	NA	NA	False	NA	NA	NA	30014295	30015134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_30014512_30014686
ENSMUST00000176966.2	chr10	-	523	2	FSM	ENSMUSG00000093674.8	ENSMUST00000176966.2	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	7075	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GCAAAGGAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	128384981	128384344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128384843_128384956
ENSMUST00000176968.2	chr19	+	1049	3	FSM	ENSMUSG00000010110.18	ENSMUST00000176968.2	1049	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTCCTCCCTCATTC	499	False	NA	NA	False	NA	NA	NA	8726366	8732429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8727137_8727269_8727392_8732272
ENSMUST00000176992.8	chr19	+	5981	37	FSM	ENSMUSG00000025224.17	ENSMUST00000176992.8	5981	37	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	13.9870972288352	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTCCCGCTGATTTT	6698	False	NA	18	True	AATAAA	-18	NA	46234526	46274948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUST00000177005.8	chr3	+	4219	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAAAATTTA	3995	False	NA	NA	False	NA	NA	NA	88232329	88238620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ENSMUST00000177005.8-0	chr3	+	1455	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	32	2732	0	0	multi-exon	FALSE	canonical	3	936	junction_4	66.9489357645064	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGGCTGCCCTAAGGG	4027	False	NA	-34	True	NA	NA	NA	88232361	88235888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ENSMUST00000177011.2	chr15	-	4145	6	FSM	ENSMUSG00000033697.17	ENSMUST00000177011.2	4145	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	12.3353151560874	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAGTAGGAAAAATATT	8210	False	NA	NA	False	NA	NA	NA	76702329	76617656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ENSMUST00000177014.8	chr11	-	4147	8	FSM	ENSMUSG00000049659.16	ENSMUST00000177014.8	4147	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.5723809439155	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTCCTGTCTGAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	20677142	20635715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_20636199_20642464_20642589_20646750_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684
ENSMUST00000177019.8	chr13	-	2626	15	FSM	ENSMUSG00000021546.19	ENSMUST00000177019.8	2626	15	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_9	1943.30427759168	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4803	False	NA	-23	True	AATAAA	-15	NA	58550278	58539052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000177019.8-0	chr13	-	1967	15	FSM	ENSMUSG00000021546.19	ENSMUST00000177019.8	2626	15	-52	711	0	0	multi-exon	FALSE	canonical	3	308	junction_9	1943.30427759168	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000177051.8	chr13	-	874	3	FSM	ENSMUSG00000021546.19	ENSMUST00000177051.8	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	5484	junction_1	576.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	58541682	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540291_58541009_58541180_58541505
ENSMUST00000177068.8	chr8	-	2931	4	FSM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	18.5472369909914	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGCTTGTTTTTTTTA	NA	False	NA	0	True	AATAAA	-44	NA	107620225	107610494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107620132
ENSMUST00000177083.8	chr15	-	4415	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_19	18.359240953674	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTTTCTGGTCACTCA	NA	False	NA	2	True	ATTAAA	-25	NA	64184488	63960384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ENSMUST00000177124.2	chr10	-	397	3	FSM	ENSMUSG00000039166.17	ENSMUST00000177124.2	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	4.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTCCATTCCGATCAC	NA	False	NA	42	True	AAAAAG	-18	NA	25172971	25159820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_25159940_25165496_25165629_25172825
ENSMUST00000177137.8	chr14	+	853	8	FSM	ENSMUSG00000021996.17	ENSMUST00000177137.8	853	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	471.460301962456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCTCAGCCAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	74973406	74987165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983162_74987084
ENSMUST00000177145.8	chr10	-	3819	9	FSM	ENSMUSG00000055531.13	ENSMUST00000177145.8	3819	9	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_4	46.3355627461241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTAAGTGTCAGTCT	4516	False	NA	NA	False	AATAAA	-22	NA	117212833	117189709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUST00000177150.2	chr11	+	383	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177150.2	383	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	190.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTATTTGTTTGGGTAAG	5848	False	NA	9	True	ATTAAA	-18	NA	83182524	83185457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83182660_83182792_83182924_83185340
ENSMUST00000177155.8	chr19	-	6632	7	FSM	ENSMUSG00000046138.16	ENSMUST00000177155.8	6632	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	8.20568908339411	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTTGTTTCTGTAA	3920	False	NA	NA	False	NA	NA	NA	29783389	29692974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29712515_29712606_29720932_29721013_29730999_29732418_29782681
ENSMUST00000177162.8	chr12	+	2728	23	FSM	ENSMUSG00000021000.18	ENSMUST00000177162.8	2728	23	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_18	104.581584665942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTTCCATAAGTTAGTC	NA	False	NA	56	True	AATAAA	-20	NA	59178287	59237008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUST00000177181.8	chr14	+	835	8	FSM	ENSMUSG00000021996.17	ENSMUST00000177181.8	835	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	471.460301962456	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCTCAGCCAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	74973406	74987165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987098
ENSMUST00000177194.3	chr5	+	491	2	FSM	ENSMUSG00000029223.13	ENSMUST00000177194.3	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCGCACGAGGGATGCTC	NA	False	NA	NA	False	NA	NA	NA	66833584	66834188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_66833666_66833778
ENSMUST00000177205.2	chr7	+	1159	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	107	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCGAGCTGCGTGAGT	NA	False	NA	34	True	AATAAA	-28	NA	24206554	24215105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24206862_24209970_24210179_24214461
ENSMUST00000177207.2	chr14	+	1476	3	FSM	ENSMUSG00000022010.20	ENSMUST00000177207.2	1476	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1157	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGTGTTTCTATATGAC	6275	False	NA	29	True	AATAAA	-19	NA	76741653	76745203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_76741734_76742688_76742738_76743856
ENSMUST00000177213.8	chrX	-	1032	4	FSM	ENSMUSG00000025040.14	ENSMUST00000177213.8	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	16.9901932498329	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTATGGCTGATTTTTT	NA	False	NA	-22	True	ATTAAA	-18	NA	17437880	17423762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541
ENSMUST00000177218.8	chr9	-	3393	11	FSM	ENSMUSG00000035934.17	ENSMUST00000177218.8	3393	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	7.1133676975115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATGCACAGTTCTCTC	NA	False	NA	-5	True	AGTAAA	-19	NA	36994605	36802277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36994502
ENSMUST00000177236.8	chr7	-	4032	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	5.45527267879434	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443664	110412737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ENSMUST00000177248.2	chr11	+	431	2	FSM	ENSMUSG00000093483.2	ENSMUST00000177248.2	431	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCCATGAGATGAGTGC	5877	False	NA	NA	False	NA	NA	NA	83182553	83183117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83182660_83182792
ENSMUST00000177258.2	chr5	+	1368	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATTTTGTATGTATT	NA	False	NA	NA	False	AATAAA	-22	NA	4242366	4247651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_4242419_4246335
ENSMUST00000177303.8	chr3	+	3000	22	FSM	ENSMUSG00000028059.17	ENSMUST00000177303.8	3000	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	95.6253317988108	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAACTGCTGATTGTCCT	NA	False	NA	9	True	AGTAAA	-15	NA	88528861	88554236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540812_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000177335.2	chr15	-	3654	2	FSM	ENSMUSG00000009739.18	ENSMUST00000177335.2	3654	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTCTCTGCCTATTTTG	8506	False	NA	-3	True	AATAAA	-18	NA	100478112	100473201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100476500_100477756
ENSMUST00000177352.8	chr15	-	3395	27	FSM	ENSMUSG00000022469.18	ENSMUST00000177352.8	3395	27	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	8.251232649531	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTTGCCTAGAGCGGT	963	False	NA	-81	True	GATAAA	-17	NA	97664943	97642896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642
ENSMUST00000177359.2	chr15	-	1110	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	30	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTATGGAATTTGTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	76544317	76542339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76543066_76543418_76543640_76544154
ENSMUST00000177371.8	chr15	-	6164	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177371.8	6164	28	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_19	14.5305128081956	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCTGACATCAGGCCA	NA	False	NA	-8	True	AATAAA	-20	NA	64184522	63958705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ENSMUST00000177374.8	chr15	-	4582	31	FSM	ENSMUSG00000022377.17	ENSMUST00000177374.8	4582	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	35.2123873405684	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTGTTTCTGGTCAC	NA	False	NA	-1	True	ATTAAA	-22	NA	64254768	63960387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64025692_64025702_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ENSMUST00000177390.8	chr3	+	2836	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	6.87386354243376	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTTCTCTCTGTACAT	NA	False	NA	4	True	AATAAA	-15	NA	95496244	95526553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
ENSMUST00000177397.8	chr13	+	2506	5	FSM	ENSMUSG00000058258.15	ENSMUST00000177397.8	737	5	50	-1819	0	-74	multi-exon	FALSE	canonical	0	0	junction_4	250.233266173784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTTAATATCTGGAT	NA	False	NA	1	True	AATAAA	-17	NA	8936028	8942413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938135_8940353
ENSMUST00000177408.2	chr4	-	689	5	FSM	ENSMUSG00000073705.11	ENSMUST00000177408.2	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	159.066809863026	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCAATCAGCTGTGCTG	NA	False	NA	-144	True	NA	NA	NA	149222026	149212996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216734_149216840_149221932
ENSMUST00000177416.2	chr17	+	506	3	FSM	ENSMUSG00000055817.19	ENSMUST00000177416.2	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	566.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTGCTGAATGAGACAG	NA	False	NA	NA	False	NA	NA	NA	84036592	84061297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_84036957_84045757_84045885_84061282
ENSMUST00000177437.8	chr6	-	2468	15	FSM	ENSMUSG00000030067.18	ENSMUST00000177437.8	2468	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	6.47443953921409	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTTAATGTATTGCT	NA	False	NA	NA	False	NA	NA	NA	99005219	98906426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992472_98993488_98993627_99005124
ENSMUST00000177451.8	chr12	-	2882	6	FSM	ENSMUSG00000033713.13	ENSMUST00000177451.8	2882	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	12.3709336753537	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAGAAAAACAGAACAG	NA	False	NA	NA	False	AAAAAG	-33	NA	99359331	99161352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359010
ENSMUST00000177466.8	chr5	+	1005	6	FSM	ENSMUSG00000079165.11	ENSMUST00000177466.8	1005	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	39.5858560599616	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTGTTGACAATAAATCA	1101	False	NA	-8	True	NA	NA	NA	137639595	137641130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137639819_137639983_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ENSMUST00000177476.8	chr11	+	4952	29	FSM	ENSMUSG00000047284.15	ENSMUST00000177476.8	4952	29	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_15	17.9310968625424	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCCTCTGCTGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	69792641	69804341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798833_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ENSMUST00000177495.2	chr19	-	5058	12	FSM	ENSMUSG00000025154.16	ENSMUST00000177495.2	1652	12	0	-3406	0	0	multi-exon	FALSE	canonical	3	21	junction_5	104.114844409653	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4527	False	NA	NA	False	ATTAAA	-17	NA	41790486	41755026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769744_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ENSMUST00000177497.8	chr13	-	2585	12	FSM	ENSMUSG00000021546.19	ENSMUST00000177497.8	2585	12	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	1120.16409659736	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	9212	False	NA	-23	True	AATAAA	-15	NA	58545869	58539052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566
ENSMUST00000177498.8	chr3	+	3966	23	FSM	ENSMUSG00000028059.17	ENSMUST00000177498.8	3966	23	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	70.6950294581072	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTAGCTCCATATCTTT	9394	False	NA	NA	False	TTTAAA	-15	NA	88523449	88554839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUST00000177501.2	chr1	+	1636	3	FSM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	240	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTATGTGTTTGTT	NA	False	NA	5	True	NA	NA	NA	16735430	16748419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_16735730_16737888_16737998_16747191
ENSMUST00000177501.2-0	chr1	+	1255	3	FSM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	3	378	0	-378	multi-exon	FALSE	canonical	3	53	junction_1	240	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAAATGTGGATGGTC	NA	False	NA	6	True	AATAAA	-17	NA	16735433	16748041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_16735730_16737888_16737998_16747191
ENSMUST00000177513.2	chr10	-	680	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177513.2	680	3	0	0	0	0	multi-exon	FALSE	canonical	3	7075	junction_2	7636	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGTTACGTGTTTT	NA	False	NA	-21	True	AATAAA	-26	NA	128385007	128383985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128384299_128384526_128384843_128384956
ENSMUST00000177527.2	chr14	-	714	6	FSM	ENSMUSG00000021773.12	ENSMUST00000177527.2	714	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_3	17.4745529270422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAACACGAAGCTTAGGG	NA	False	NA	-106	True	NA	NA	NA	21898755	21897342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608
ENSMUST00000177530.8	chr13	-	4145	5	FSM	ENSMUSG00000050954.16	ENSMUST00000177530.8	4145	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.58287544405155	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTCAACAATTCCAT	NA	False	NA	NA	False	NA	NA	NA	48666870	48641134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_48644870_48651798_48651895_48652255_48652383_48660382_48660470_48666770
ENSMUST00000177545.2	chr5	+	4464	22	FSM	ENSMUSG00000029720.10	ENSMUST00000177545.2	4464	22	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_21	33.9740463834439	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGTCTGCAGTGGGA	2238	False	NA	23	True	AATAAA	-15	NA	137627436	137641161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ENSMUST00000177554.2	chrX	+	2028	7	FSM	ENSMUSG00000094885.8	ENSMUST00000177554.2	2028	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.58022301426107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	147880947	147921148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_147881040_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
ENSMUST00000177585.9	chr10	-	3815	6	FSM	ENSMUSG00000079685.11	ENSMUST00000177585.9	3815	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	15.4324333790883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAGAAAGAGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	7423638	7393037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7406953_7407209_7423253
ENSMUST00000177587.9	chr12	+	1645	4	FSM	ENSMUSG00000034271.17	ENSMUST00000177587.9	1645	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	88.8606899715629	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCGAGTGGTGTCTG	6250	False	NA	34	True	AGTAAA	-20	NA	85645800	85686652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_85646002_85654906_85655140_85678418_85678524_85685546
ENSMUST00000177588.10	chr7	+	3174	28	FSM	ENSMUSG00000056394.21	ENSMUST00000177588.10	3174	28	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	193.081793225492	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	1107	False	NA	30	True	AATAAA	-18	NA	13011238	13045350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_13011456_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUST00000177591.2	chrY	+	774	4	FSM	ENSMUSG00000096768.9	ENSMUST00000177591.2	774	4	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	847.613250381459	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	4656	False	NA	NA	False	AATAAA	-17	NA	90796710	90827733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrY_+_90797249_90804564_90804687_90827617_90827703_90827704
ENSMUST00000177592.2	chr4	-	3539	10	FSM	ENSMUSG00000078515.5	ENSMUST00000177592.2	3539	10	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_7	26.8842971285984	399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATTTTAGAATGAGTGAG	NA	False	NA	-6	True	AATAAA	-24	NA	141450730	141410873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ENSMUST00000177604.2	chr18	-	2605	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAAGGCATGGTGGCTTCC	6726	False	NA	-8	True	NA	NA	NA	74340889	74328369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ENSMUST00000177604.2-0	chr18	-	1088	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	39	1478	0	-298	multi-exon	FALSE	canonical	3	429	junction_6	32.9768437274131	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTTCAAAACGTAC	6765	False	NA	-19	True	AGTAAA	-16	NA	74340850	74329847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ENSMUST00000177606.8	chrX	+	2028	7	FSM	ENSMUSG00000094885.8	ENSMUST00000177606.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.58022301426107	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	147871310	147921148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_147871403_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
ENSMUST00000177608.8	chr1	+	5598	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.77989051592099	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCGTTTCAGAGAAATGA	NA	False	NA	NA	False	AATAAA	-17	NA	12762500	12931416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ENSMUST00000177654.8	chr4	-	4765	23	FSM	ENSMUSG00000039936.19	ENSMUST00000177654.8	4765	23	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_11	5.46684219969478	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTCTTGGCTCAAATAAC	NA	False	NA	-2	True	AATAAA	-18	NA	149758651	149733626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_149735235_149736221_149736355_149736683_149736830_149737067_149737192_149737767_149737936_149738263_149738343_149738479_149738593_149738681_149738861_149738974_149739075_149739272_149739417_149739583_149739715_149739792_149739961_149740037_149740089_149740837_149740969_149741060_149741158_149741702_149741925_149742838_149742929_149743168_149743319_149743427_149743608_149744149_149744380_149744458_149744688_149747600_149747774_149758532
ENSMUST00000177667.2	chr19	+	1243	5	FSM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.8004237212059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	6316	False	NA	8	True	AATAAA	-17	NA	46316625	46318884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46316741_46316841_46316966_46317113_46317268_46317526_46318033_46318540
ENSMUST00000177669.2	chr11	-	1997	1	FSM	ENSMUSG00000018293.5	ENSMUST00000177669.2	1997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCCCTTCTTGCTTTGA	NA	False	NA	NA	False	ACTAAA	-16	NA	70545434	70543437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70543400_70545400
ENSMUST00000177671.8	chrY	+	708	5	FSM	ENSMUSG00000096768.9	ENSMUST00000177671.8	708	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	826.400780493339	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	4715	False	NA	NA	False	AATAAA	-17	NA	90796769	90827733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrY_+_90797028_90797032_90797234_90797237_90797249_90804564_90804687_90827617
ENSMUST00000177714.8	chr9	-	2623	4	FSM	ENSMUSG00000074829.11	ENSMUST00000177714.8	2623	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	8.73053390247253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTATTATCATGTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	124075326	124054433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124075189
ENSMUST00000177731.8	chr11	+	5284	19	FSM	ENSMUSG00000020817.17	ENSMUST00000177731.8	3167	19	-147	-1970	0	-195	multi-exon	FALSE	canonical	0	0	junction_1	54.1469194773709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTCCTTTGCAT	NA	False	NA	22	True	ATTAAA	-23	NA	70735603	70833736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70735835_70737264_70737336_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ENSMUST00000177738.8	chrX	+	2790	23	FSM	ENSMUSG00000031060.17	ENSMUST00000177738.8	2790	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	91.383636435986	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTTGAAAGCAGTTTC	2870	False	NA	NA	False	NA	NA	NA	20486336	20516923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUST00000177752.9	chr19	-	664	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_5	164.60571071503	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGAGTGAGTCTGTATT	NA	False	NA	-6	True	TTTAAA	-32	NA	6957869	6955111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
ENSMUST00000177754.9	chr9	-	5248	39	FSM	ENSMUSG00000004099.17	ENSMUST00000177754.9	5248	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_38	184.537934602832	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	8561	False	NA	-7	True	AATAAA	-17	NA	20871184	20818504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20871028
ENSMUST00000177767.3	chr10	-	1941	1	FSM	ENSMUSG00000093798.3	ENSMUST00000177767.3	1941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26683	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTCCAAGAAGAAGGTG	NA	False	NA	NA	False	NA	NA	NA	14623046	14621105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_14621100_14623000
ENSMUST00000177768.3	chr12	+	1412	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	0	2510	0	-2510	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGATTTCCTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	55171253	55186379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
ENSMUST00000177786.8	chr14	-	1955	7	FSM	ENSMUSG00000096574.8	ENSMUST00000177786.8	1955	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.46249406456535	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	19137146	19114973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_19116117_19119615_19119799_19120474_19120607_19121556_19121720_19122451_19122587_19135569_19135684_19137061
ENSMUST00000177800.8	chr5	-	1668	4	FSM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	33.2365260920372	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTAGTGTGTTACTTTTT	6315	False	NA	NA	False	ATTAAA	-20	NA	120750654	120747122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120748028_120749442_120749795_120750044_120750140_120750338
ENSMUST00000177811.8	chr1	-	4231	15	FSM	ENSMUSG00000022995.17	ENSMUST00000177811.8	4231	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	156.216751564574	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	5643	False	NA	NA	False	ACTAAA	-44	NA	181847545	181732009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181750066_181751124_181751406_181758242_181758328_181772605_181772618_181783958_181784137_181789318_181789485_181847094
ENSMUST00000177840.9	chr7	+	1708	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	29.0537854500854	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATAAGCACTCGAATC	NA	False	NA	-2	True	NA	NA	NA	141047334	141051376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUST00000177841.8	chr7	+	1364	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	18	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623104	142624824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_142623251_142623491_142623558_142623672
ENSMUST00000177848.3	chr13	-	2392	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_16	17.1335516968899	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAGTGCTTAGTATTTA	NA	False	NA	NA	False	AGTAAA	-13	NA	100787555	100753986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ENSMUST00000177850.8	chr10	+	708	6	FSM	ENSMUSG00000035242.16	ENSMUST00000177850.8	708	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	3349.66711181873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTCTACACTCTGGAG	NA	False	NA	NA	False	NA	NA	NA	80662516	80664791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80662740_80664076_80664129_80664129_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUST00000177851.9	chr8	-	5007	12	FSM	ENSMUSG00000036180.16	ENSMUST00000177851.9	5007	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	439.016726276361	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAACTGTATTGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	70448883	70359725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70362625_70364326_70364520_70365551_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ENSMUST00000177856.8	chr16	+	1878	18	FSM	ENSMUSG00000075704.18	ENSMUST00000177856.8	1878	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	39.8936301946038	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18245187	18297817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18270720_18270728_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUST00000177880.2	chr4	-	1969	2	FSM	ENSMUSG00000028629.10	ENSMUST00000177880.2	1969	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGTTGACTTGATGTT	NA	False	NA	-15	True	AATAAA	-16	NA	120782202	120778398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_120779873_120781707
ENSMUST00000177895.8	chr7	+	1486	9	FSM	ENSMUSG00000030638.14	ENSMUST00000177895.8	1486	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	89.2394951801051	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81824697	81956627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_81824768_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUST00000177904.8	chrX	-	3851	4	FSM	ENSMUSG00000047996.17	ENSMUST00000177904.8	3851	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.78888096369861	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTTTTTCTTATATA	NA	False	NA	NA	False	AATAAA	-18	NA	77627388	77493218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_77496779_77527356_77527518_77564376_77564428_77627309
ENSMUST00000177916.8	chr13	-	3067	7	FSM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	50.5426112854842	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252341	120226722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ENSMUST00000177916.8-0	chr13	-	2990	7	FSM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	-1	78	0	-77	multi-exon	FALSE	canonical	3	32	junction_6	50.5426112854842	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252342	120226800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ENSMUST00000177939.8	chr17	-	3844	13	FSM	ENSMUSG00000024222.18	ENSMUST00000177939.8	3844	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	237.828179691885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGGTTTTTCATTGT	NA	False	NA	-22	True	AATAAA	-7	NA	28736498	28618078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28706878_28706978_28726162_28726444_28736368
ENSMUST00000177943.8	chr1	+	3212	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	4.65698400254929	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGTCTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	131890704	131910707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
ENSMUST00000177950.8	chr13	-	3941	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_10	160.927934181732	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835621	54827211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
ENSMUST00000177955.8	chr8	+	1307	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	41.4568048294447	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	NA	False	NA	33	True	NA	NA	NA	11547505	11563287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUST00000177962.9	chr12	-	1784	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	-23	4394	0	0	multi-exon	FALSE	canonical	3	313	junction_3	46.0678293167714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATAATTGGAGTTTT	NA	False	NA	NA	False	TATAAA	-10	NA	31684657	31645359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ENSMUST00000177974.8	chr5	-	3984	21	FSM	ENSMUSG00000029467.16	ENSMUST00000177974.8	3984	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	272.291071282185	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGCTGTGGCTGATTT	7607	False	NA	NA	False	AATAAA	-22	NA	122639958	122591576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122592368_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ENSMUST00000177978.3	chr12	+	3863	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	12.794041581924	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTGCAGAGTTCTC	NA	False	NA	NA	False	NA	NA	NA	55246376	55263953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
ENSMUST00000178026.2	chr10	+	1218	6	FSM	ENSMUSG00000053219.16	ENSMUST00000178026.2	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	12.9769025580067	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	22049817	22250038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22249675
ENSMUST00000178033.5	chr1	+	496	2	FSM	ENSMUSG00000116158.2	ENSMUST00000178033.5	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGTGTGTTATTTTTCC	8854	False	NA	4	True	AATAAA	-16	NA	133254949	133257460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_133255079_133257093
ENSMUST00000178034.9	chr14	-	2730	15	FSM	ENSMUSG00000022218.17	ENSMUST00000178034.9	2730	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_14	38.2803834241775	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGTTTAGTAGTCCT	396	False	NA	-23	True	AATAAA	-22	NA	55950951	55937490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55937886_55941760_55941898_55942264_55942426_55942914_55943197_55943297_55943452_55943896_55943986_55946110_55946215_55946339_55946479_55946850_55947026_55947378_55947487_55947924_55948044_55948395_55948645_55949557_55949747_55949890_55950212_55950843
ENSMUST00000178041.8	chr10	+	1536	13	FSM	ENSMUSG00000025395.15	ENSMUST00000178041.8	1536	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	189.963593003151	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTGCAGAAGTTTGTAA	980	False	NA	2	True	AATAAA	-12	NA	127851036	127865852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859448_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUST00000178048.8	chr7	-	4524	18	FSM	ENSMUSG00000050382.15	ENSMUST00000178048.8	4524	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	9.35904351425561	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGCTTACATCTTAAA	NA	False	NA	-1	True	AATAAA	-14	NA	79363934	79347846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578
ENSMUST00000178049.2	chr2	-	1316	1	FSM	ENSMUSG00000096006.2	ENSMUST00000178049.2	1316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	7160	False	NA	NA	False	AGTAAA	-19	NA	113751486	113750170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_113750200_113751500
ENSMUST00000178064.9	chr8	-	818	4	FSM	ENSMUSG00000031736.12	ENSMUST00000178064.9	818	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	2.16024689946929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGTTTGTGTAATGG	6471	False	NA	NA	False	AATAAA	-21	NA	93073498	93052660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_93053091_93071480_93071668_93072977_93073092_93073411
ENSMUST00000178074.8	chr12	+	4006	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAAGCTCTTACTTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	3285503	3291410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ENSMUST00000178074.8-0	chr12	+	847	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	22	3137	0	0	multi-exon	FALSE	canonical	3	136	junction_1	34.8934887272046	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAGGACAAATTT	NA	False	NA	10	True	AATAAA	-19	NA	3285525	3288273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ENSMUST00000178075.8	chr9	+	4512	27	FSM	ENSMUSG00000006676.17	ENSMUST00000178075.8	4512	27	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_10	41.4654094097091	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTGACTGATCCACAA	NA	False	NA	11	True	AATAAA	-15	NA	108368054	108379516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ENSMUST00000178078.8	chr7	-	723	4	FSM	ENSMUSG00000035642.17	ENSMUST00000178078.8	723	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	26.7124606795322	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGCATTAGCGATCTCAC	NA	False	NA	NA	False	AATAAA	-31	NA	97224860	97199537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794
ENSMUST00000178079.8	chr1	+	487	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	0	0	0	0	multi-exon	FALSE	canonical	3	1086	junction_1	4596.75456164455	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCAGGGTTTGGTTTTCC	NA	False	NA	24	True	AATAAA	-13	NA	39407009	39410445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUST00000178087.3	chr19	+	2694	5	FSM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	34.0954542424646	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTGACATCCATCT	5	True	NA	NA	False	GATAAA	-14	NA	45006650	45015541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUST00000178093.3	chr16	+	1785	17	FSM	ENSMUSG00000075704.18	ENSMUST00000178093.3	1785	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	46.3921801061343	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATGTCTGCGTGTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	18245187	18297817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18270720_18270728_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUST00000178098.8	chr3	-	4434	7	FSM	ENSMUSG00000027708.15	ENSMUST00000178098.8	4434	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	71.2618411213182	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTTATTGCTTCCAT	NA	False	NA	0	True	TATAAA	-17	NA	35986483	35946253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986341
ENSMUST00000178105.3	chr11	-	2187	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	0	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGGGGTTTCTTTGGG	691	False	NA	0	True	ATTAAA	-22	NA	87874838	87870350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_87872397_87874697
ENSMUST00000178110.3	chr9	-	5870	39	FSM	ENSMUSG00000004099.17	ENSMUST00000178110.3	5870	39	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_38	182.859619877428	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20863919	20818504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20863141
ENSMUST00000178114.2	chr19	-	2965	10	FSM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	13.9283882771841	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCGGTGTGGTGTTTGC	5915	False	NA	-2	True	AATAAA	-20	NA	34504874	34469717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502243_34504765
ENSMUST00000178142.2	chr13	-	2276	4	FSM	ENSMUSG00000095930.2	ENSMUST00000178142.2	4103	4	0	1827	0	-1827	multi-exon	FALSE	canonical	3	6	junction_2	3.55902608401044	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTCTCTTAGCCTAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	120217418	120173456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_120174332_120175643_120175913_120189115_120190060_120217230
ENSMUST00000178147.3	chrX	-	651	1	FSM	ENSMUSG00000095597.3	ENSMUST00000178147.3	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2856	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	151693151	151692500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151692500_151693200
ENSMUST00000178155.9	chr16	+	429	4	FSM	ENSMUSG00000096215.9	ENSMUST00000178155.9	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	13.8804418757713	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGTCTGGACTGTGTT	NA	False	NA	11	True	NA	NA	NA	4825200	4826173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4825283_4825607_4825753_4825835_4825934_4826069
ENSMUST00000178162.3	chr7	+	3356	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	16.6789538041209	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGAGTTAATTTCTTT	NA	False	NA	NA	False	AAGAAA	-18	NA	29515538	29530430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
ENSMUST00000178169.2	chrX	+	2028	7	FSM	ENSMUSG00000095621.2	ENSMUST00000178169.2	2028	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.67707520800338	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	148230612	148270780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_148230705_148247706_148247833_148248551_148248632_148252302_148253262_148262449_148262532_148263337_148263388_148270141
ENSMUST00000178171.3	chr5	+	1233	1	FSM	ENSMUSG00000094090.3	ENSMUST00000178171.3	1233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTTGCCTTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	146511697	146512930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_146511700_146512900
ENSMUST00000178202.8	chr11	-	4317	11	FSM	ENSMUSG00000001036.18	ENSMUST00000178202.8	4317	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	137.591569509182	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470513	61408075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ENSMUST00000178231.2	chr10	+	4516	6	FSM	ENSMUSG00000035370.10	ENSMUST00000178231.2	4516	6	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_4	45.0271029492238	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	False	NA	13	True	AATAAA	-13	NA	80441854	80451617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUST00000178235.8	chr1	-	1756	11	FSM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	361.877106211487	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCAGTGTCTGTGTGCAT	NA	False	NA	-5	True	AATAAA	-13	NA	74323839	74319004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323204_74323661
ENSMUST00000178254.2	chr11	-	724	3	FSM	ENSMUSG00000018293.5	ENSMUST00000178254.2	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_2	4423	2854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAAATTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	70545447	70542764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_70543048_70543612_70543781_70545174
ENSMUST00000178267.8	chr9	-	4309	39	FSM	ENSMUSG00000041528.16	ENSMUST00000178267.8	4309	39	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	14.098780914274	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCCTGGGCCCGCTC	NA	False	NA	-7	True	ATTAAA	-11	NA	107956574	107928875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107956467
ENSMUST00000178271.3	chr13	-	2966	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	48.3110668861025	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	False	NA	76	True	AGTAAA	-18	NA	120252342	120226722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ENSMUST00000178280.2	chr11	-	1871	2	FSM	ENSMUSG00000017561.17	ENSMUST00000178280.2	1871	2	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4541	False	NA	NA	False	NA	NA	NA	79971764	79953509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_79955226_79971609
ENSMUST00000178289.3	chr13	+	2035	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCCTGTTTTTCATTGT	NA	False	NA	10	True	ATTAAA	-17	NA	14804738	14812788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_14804870_14810884
ENSMUST00000178310.9	chr19	+	613	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	11442	junction_1	1294.53167207295	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	982	False	NA	4	True	AATAAA	-16	NA	6107873	6109549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000178324.2	chr8	-	1989	15	FSM	ENSMUSG00000031478.17	ENSMUST00000178324.2	1989	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	9.42342933374911	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCGTGTGTGCTGGTTTT	922	False	NA	-1	True	AATACA	-14	NA	22652510	22618301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339
ENSMUST00000178328.8	chr3	-	1698	7	FSM	ENSMUSG00000019528.19	ENSMUST00000178328.8	1698	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	8.93805845186128	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGGTTGTTTAAGTA	NA	False	NA	-5	True	AATAAA	-12	NA	20209260	20176250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
ENSMUST00000178331.8	chr12	+	812	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178331.8	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	69.5621225156974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAGGACAAATTT	NA	False	NA	10	True	AATAAA	-19	NA	3285525	3288273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288063
ENSMUST00000178364.8	chr8	+	684	5	FSM	ENSMUSG00000031505.12	ENSMUST00000178364.8	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	55.3940430010304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATGGAGGTCATTAAA	NA	False	NA	NA	False	NA	NA	NA	11547592	11557070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706
ENSMUST00000178377.3	chr19	-	654	1	FSM	ENSMUSG00000095690.3	ENSMUST00000178377.3	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCCCTGCACTTTCTT	6604	False	NA	NA	False	NA	NA	NA	7376442	7375788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7375800_7376400
ENSMUST00000178383.8	chr10	+	921	8	FSM	ENSMUSG00000023175.16	ENSMUST00000178383.8	921	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	2288.21761131556	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAGTGTTGTCACTAC	NA	False	NA	80	True	NA	NA	NA	79540403	79547657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546559_79546673_79546755_79547089_79547115_79547327
ENSMUST00000178384.2	chr12	-	1766	2	FSM	ENSMUSG00000096458.8	ENSMUST00000178384.2	1284	2	16	-498	0	498	multi-exon	FALSE	canonical	3	30	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATCTTTGTATACAT	NA	False	NA	-23	True	AATAAA	-16	NA	102709904	102707990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102709654_102709801
ENSMUST00000178385.9	chr7	-	1538	7	FSM	ENSMUSG00000030629.16	ENSMUST00000178385.9	1538	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	230.002475832085	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84328600	84264261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ENSMUST00000178399.3	chr14	-	1865	10	FSM	ENSMUSG00000022221.15	ENSMUST00000178399.3	1865	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	41.6620738209433	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGTCTGAGGTGTCAA	NA	False	NA	-3	True	AATAAA	-18	NA	56026314	56022453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025822_56026073
ENSMUST00000178400.9	chr16	+	3745	16	FSM	ENSMUSG00000022701.19	ENSMUST00000178400.9	3745	16	0	0	0	0	multi-exon	FALSE	canonical	1	27	junction_10	16.0949957716331	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCGATCCAGCATAGT	NA	False	NA	NA	False	AATAAA	-14	NA	43710162	43784677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ENSMUST00000178400.9-0	chr16	+	3043	16	FSM	ENSMUSG00000022701.19	ENSMUST00000178400.9	3745	16	99	603	0	-603	multi-exon	FALSE	canonical	1	27	junction_10	16.0949957716331	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACGGAGGGGGCGTCCTT	NA	False	NA	30	True	AATAAA	-30	NA	43710261	43784074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ENSMUST00000178401.2	chr17	-	5126	3	FSM	ENSMUSG00000095325.4	ENSMUST00000178401.2	5126	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGACATTCTGTTTCCA	NA	False	NA	NA	False	ATTAAA	-13	NA	33105057	33098201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33103140_33104676_33104738_33104930
ENSMUST00000178422.9	chr10	+	1730	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	26.7675176286483	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAAAAGGACACACTGCGG	8555	False	NA	NA	False	NA	NA	NA	81018838	81029031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ENSMUST00000178422.9-0	chr10	+	1452	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	64	214	0	0	multi-exon	FALSE	canonical	3	321	junction_1	26.7675176286483	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTCCACGTACTGT	8619	False	NA	-5	True	NA	NA	NA	81018902	81028817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ENSMUST00000178474.8	chr1	-	2565	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	0	0	0	0	multi-exon	FALSE	canonical	3	2308	junction_6	123.717286351378	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	False	NA	-4	True	AATAAA	-20	NA	125363284	125320642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ENSMUST00000178504.8	chr2	-	3668	28	FSM	ENSMUSG00000027546.16	ENSMUST00000178504.8	3668	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.2704012099035	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATAAAAGTCTCTGTC	6459	False	NA	-48	True	NA	NA	NA	168583884	168476382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_168476829_168479420_168479621_168480985_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168583601
ENSMUST00000178522.3	chr15	-	3314	9	FSM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	111.157545852722	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTGCCAGCGAGGT	NA	False	NA	-4	True	AATATA	-33	NA	79287119	79244884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287046
ENSMUST00000178533.2	chr2	+	2493	1	FSM	ENSMUSG00000096337.2	ENSMUST00000178533.2	2493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGAAGCAAAGAAGCC	2685	False	NA	NA	False	NA	NA	NA	83809276	83811769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83809300_83811800
ENSMUST00000178534.8	chr7	-	1530	12	FSM	ENSMUSG00000030850.18	ENSMUST00000178534.8	1530	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	65.693629010445	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGCACCTCAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	130121691	129996287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121606
ENSMUST00000178543.8	chr11	+	4677	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	121.043192891854	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTACTTGTGGTTTTG	NA	False	NA	14	True	NA	NA	NA	49737577	49777248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ENSMUST00000178557.2	chr1	+	483	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTCCTGCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	43228315	43228798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_43228300_43228800
ENSMUST00000178563.3	chr10	-	3528	4	FSM	ENSMUSG00000096687.9	ENSMUST00000178563.3	3528	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.98887651569859	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGACTGCTTTGTAGCA	NA	False	NA	NA	False	AATAAA	-26	NA	39775234	39766008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_39768926_39770011_39770129_39770767_39770937_39774909
ENSMUST00000178572.3	chr17	+	508	1	FSM	ENSMUSG00000095266.3	ENSMUST00000178572.3	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGTAAACATCGGTGAG	NA	False	NA	NA	False	NA	NA	NA	24242747	24243255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24242700_24243300
ENSMUST00000178573.8	chr16	+	1153	3	FSM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	36.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAACAGTAATTTTG	NA	False	NA	9	True	AATAAA	-10	NA	32066044	32075892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32066086_32070640_32071137_32075276
ENSMUST00000178605.2	chr18	+	3796	12	FSM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_10	49.0162732296358	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	False	NA	8	True	ATTAAA	-19	NA	24365653	24419867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUST00000178622.3	chr11	+	3566	15	FSM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_13	21.5180275630477	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGAGTTGTTTGAAGT	NA	False	NA	NA	False	AATAAA	-20	NA	43328169	43338808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ENSMUST00000178627.8	chr1	+	1363	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_9	29.8142396999972	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAGACCATGCTAGGC	319	False	NA	NA	False	AAGAAA	-16	NA	91178040	91213747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000178628.9	chr15	-	4969	3	FSM	ENSMUSG00000075511.10	ENSMUST00000178628.9	4969	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	23.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCTCAAATGTTTGTCA	245	False	NA	0	True	NA	NA	NA	83251483	83238047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83242239_83249229_83249715_83251190
ENSMUST00000178632.8	chrX	+	933	3	FSM	ENSMUSG00000046432.13	ENSMUST00000178632.8	933	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	2417.5	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGAAATTCAACAGTATT	NA	False	NA	NA	False	AATAAA	-32	NA	135171001	135172727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_135171151_135171558_135171632_135172016
ENSMUST00000178636.2	chr11	+	6617	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_18	70.0811038091661	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899889	57952860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ENSMUST00000178728.2	chr14	-	1955	7	FSM	ENSMUSG00000095195.8	ENSMUST00000178728.2	1955	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.80277563773199	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCG	NA	False	NA	NA	False	AATAAA	-17	NA	18897750	18875552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_18876696_18880194_18880378_18881053_18881186_18882135_18882299_18883030_18883166_18896174_18896289_18897665
ENSMUST00000178730.8	chr14	-	3863	30	FSM	ENSMUSG00000059456.14	ENSMUST00000178730.8	3863	30	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_25	4.28613892919174	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGACTGTGTCGGTTAT	NA	False	NA	0	True	ATTAAA	-25	NA	66451001	66390706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891_66424972_66427022_66427111_66427504_66427684_66450760
ENSMUST00000178760.2	chr5	-	6566	3	FSM	ENSMUSG00000046572.11	ENSMUST00000178760.2	425	3	0	-6141	0	0	multi-exon	FALSE	canonical	3	25	junction_1	98.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	-5	True	AATAAA	-16	NA	38842100	38825828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38832018_38839827_38840126_38842021
ENSMUST00000178774.3	chr17	-	498	5	FSM	ENSMUSG00000052146.17	ENSMUST00000178774.3	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	4850	junction_1	728.093915645502	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGAGTTTATGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	27853449	27849438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299
ENSMUST00000178808.8	chr3	-	1462	8	FSM	ENSMUSG00000027890.18	ENSMUST00000178808.8	1462	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	32.937169624258	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGATGTCTTTTCCT	NA	False	NA	-6	True	AATAAA	-18	NA	107952175	107947725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107948642_107949451_107949563_107949642_107949739_107950639_107950741_107950835_107950918_107951210_107951276_107951668_107951745_107952160
ENSMUST00000178832.2	chr3	-	648	2	FSM	ENSMUSG00000094487.2	ENSMUST00000178832.2	648	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGAAATACAAAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	54621774	54620596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54620624_54621153
ENSMUST00000178851.2	chr7	+	2797	5	FSM	ENSMUSG00000030649.19	ENSMUST00000178851.2	2797	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_4	71.736932607967	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGACAGCTATCCTGAGT	9204	False	NA	NA	False	AATAAA	-34	NA	101547001	101550846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUST00000178855.8	chr11	-	334	4	FSM	ENSMUSG00000078974.11	ENSMUST00000178855.8	779	4	352	93	0	-80	multi-exon	FALSE	canonical	3	96	junction_3	2890.84082347449	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTTTTGTTT	NA	False	NA	-131	True	AGTAAA	-13	NA	16458132	16451730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458078
ENSMUST00000178858.3	chr17	-	804	2	FSM	ENSMUSG00000079471.5	ENSMUST00000178858.3	804	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGGTGGTGGCTTTTGT	NA	False	NA	-5	True	AATAAA	-20	NA	45912993	45911896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45912612_45912904
ENSMUST00000178876.10	chr7	+	3282	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCTCTGTGTATTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	37883077	37896992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_37883325_37888030_37888202_37894128
ENSMUST00000178876.10-0	chr7	+	2111	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	195	976	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCATATCTTTCTGT	NA	False	NA	9	True	TTTAAA	-5	NA	37883272	37896016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_37883325_37888030_37888202_37894128
ENSMUST00000178884.8	chr2	-	5104	17	FSM	ENSMUSG00000027347.19	ENSMUST00000178884.8	5104	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	14.2390308658981	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTCAAAGTCGTGTGC	NA	False	NA	-8	True	CATAAA	-15	NA	117173358	117110474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_117113158_117115333_117115714_117116552_117116706_117117322_117117360_117118304_117118450_117119097_117119208_117119825_117119931_117120796_117120878_117122146_117122423_117124234_117124352_117125189_117125364_117128942_117129097_117130923_117131056_117132441_117132503_117136256_117136365_117168756_117168942_117173155
ENSMUST00000178888.2	chr17	+	500	1	FSM	ENSMUSG00000080316.12	ENSMUST00000178888.2	500	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTGTTTGTTTGCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	18058833	18059333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_18058800_18059300
ENSMUST00000178908.2	chr2	-	2239	11	FSM	ENSMUSG00000058835.15	ENSMUST00000178908.2	2239	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	121.89257565578	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGATTTTGGCCTCTCCT	NA	False	NA	-5	True	TATAAA	-31	NA	22930231	22831244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861038_22861054_22861094_22861272_22884534_22884703_22929960
ENSMUST00000178925.8	chr4	+	6557	11	FSM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	42.596243965871	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	24	False	NA	7	True	AATAAA	-20	NA	32615472	32653265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ENSMUST00000178960.2	chr2	+	2493	1	FSM	ENSMUSG00000094336.2	ENSMUST00000178960.2	2493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGAAGCAAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	83791846	83794339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83791800_83794300
ENSMUST00000178977.9	chr9	-	2650	9	FSM	ENSMUSG00000031938.16	ENSMUST00000178977.9	2650	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.64005494464026	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTTTTCTTTC	NA	False	NA	-7	True	AATAAA	-15	NA	15217463	15194634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15203295_15203473_15205727_15205830_15205981_15206056_15209138_15209238_15212662_15212810_15217332
ENSMUST00000178997.8	chr2	+	4161	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	2694	False	NA	13	True	NA	NA	NA	152689883	152737241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000178997.8-0	chr2	+	2752	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	118	1291	0	-624	multi-exon	FALSE	canonical	3	176	junction_2	164.31464036434	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2812	False	NA	29	True	AATAAA	-28	NA	152690001	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUST00000179001.8	chr2	+	3812	9	FSM	ENSMUSG00000037902.19	ENSMUST00000179001.8	3812	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	29.9934888767546	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGCCTTGGGGGT	NA	False	NA	NA	False	AATAAA	-12	NA	129434758	129474140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_129434996_129435523_129435615_129450823_129451181_129457366_129457685_129458142_129458479_129460376_129460491_129463122_129463148_129469865_129469906_129471846
ENSMUST00000179021.2	chrX	+	2022	7	FSM	ENSMUSG00000094941.2	ENSMUST00000179021.2	2022	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	5.58022301426107	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	148055372	148087999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_148055459_148064915_148065042_148065760_148065841_148069512_148070472_148079665_148079748_148080553_148080604_148087360
ENSMUST00000179022.8	chr10	-	3370	12	FSM	ENSMUSG00000062075.14	ENSMUST00000179022.8	3370	12	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_8	24.5238962565761	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3111	False	NA	-1	True	AATAAA	-17	NA	80754079	80737197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ENSMUST00000179077.2	chrY	+	887	5	FSM	ENSMUSG00000096768.9	ENSMUST00000179077.2	887	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	263.031723371916	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCAGATGTGTGTGTGT	4800	False	NA	NA	False	AATAAA	-17	NA	90796854	90827733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrY_+_90796959_90796962_90796966_90796969_90797249_90804564_90804950_90827617
ENSMUST00000179078.9	chr13	-	1081	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	108	247	0	0	multi-exon	FALSE	canonical	0	0	junction_3	36.2981481009094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGTAATTTTGTTTC	NA	False	NA	-9	True	NA	NA	NA	76166681	76150885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
ENSMUST00000179094.8	chr11	-	4052	17	FSM	ENSMUSG00000061306.17	ENSMUST00000179094.8	4052	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	187.660889305683	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5030	False	NA	-12	True	AATAAA	-12	NA	120042138	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119996863_119997259_119997437_120000197_120000222_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUST00000179104.2	chr8	+	1096	1	FSM	ENSMUSG00000031731.17	ENSMUST00000179104.2	1096	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAACTTTGCTGCCTTG	NA	False	NA	15	True	AATAAA	-17	NA	110589739	110590835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110589700_110590800
ENSMUST00000179108.9	chr19	+	2798	5	FSM	ENSMUSG00000035342.15	ENSMUST00000179108.9	2798	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	54.407605166925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCCATCTCTGCTTGCT	1587	False	NA	NA	False	GATAAA	-23	NA	45003638	45015550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_45003753_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUST00000179114.8	chr11	+	1264	5	FSM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	19.8179211826064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCCCTCCTTTTTC	NA	False	NA	NA	False	NA	NA	NA	70735617	70784947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394
ENSMUST00000179117.2	chrX	+	2773	4	FSM	ENSMUSG00000067771.10	ENSMUST00000179117.2	2773	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	2.44948974278318	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAGTGTAGATGTCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	72166673	72172866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72166742_72167034_72167132_72168423_72168590_72170424
ENSMUST00000179118.2	chr19	-	840	6	FSM	ENSMUSG00000024963.13	ENSMUST00000179118.2	840	6	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_3	69.5097115516961	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCGATTCGGTCCTTCAG	9507	False	NA	-4	True	AATAAA	-17	NA	6969640	6965278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526
ENSMUST00000179139.3	chr12	+	3840	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCATTACCTAAAATAGAT	NA	False	NA	NA	False	AATAAA	-28	NA	4284026	4289950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4284279_4286362
ENSMUST00000179139.3-0	chr12	+	588	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	0	3252	0	-3252	multi-exon	FALSE	canonical	3	212	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTACTATCATCATTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	4284026	4286698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4284279_4286362
ENSMUST00000179142.2	chr19	+	736	4	FSM	ENSMUSG00000038274.14	ENSMUST00000179142.2	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	14010	junction_2	399.82023738453	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTCTTCATTTGTAA	1105	False	NA	9	True	AATAAA	-21	NA	6107996	6109554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000179163.3	chr17	-	3340	9	FSM	ENSMUSG00000024142.16	ENSMUST00000179163.3	3340	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	23.0813777751676	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9587	False	NA	0	True	AATAAA	-17	NA	24698052	24692524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697433_24697985
ENSMUST00000179165.9	chr15	+	4325	7	FSM	ENSMUSG00000022297.16	ENSMUST00000179165.9	4325	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.64702478203247	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTGTATTGTGTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	38869428	38901583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_38869828_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ENSMUST00000179172.8	chr10	+	744	6	FSM	ENSMUSG00000035242.16	ENSMUST00000179172.8	744	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	3507.00679212345	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGCCCTGCCCAGTGTC	NA	False	NA	NA	False	NA	NA	NA	80662526	80664839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80662740_80664070_80664129_80664129_80664217_80664294_80664468_80664552_80664631_80664704
ENSMUST00000179189.9	chr19	-	1411	4	FSM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	11.4406682011537	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCCTCCCTTCCTCCT	NA	False	NA	NA	False	GGGGCT	-4	NA	4843888	4835334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843
ENSMUST00000179192.2	chr2	+	2493	1	FSM	ENSMUSG00000094125.2	ENSMUST00000179192.2	2493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGAAGCAAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	83786036	83788529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83786000_83788500
ENSMUST00000179218.9	chr12	+	2827	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	16.7257286836777	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGAGTGCTTTATATT	NA	False	NA	NA	False	AATAAA	-18	NA	102435393	102464164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ENSMUST00000179233.2	chr8	-	1423	9	FSM	ENSMUSG00000008892.13	ENSMUST00000179233.2	1423	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	726.253560662528	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTAGTAGTGGTTGGT	NA	False	NA	0	True	AATAAA	-33	NA	23083829	23067090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077565_23077619_23078741_23078811_23083699
ENSMUST00000179238.8	chr10	+	2657	15	FSM	ENSMUSG00000004207.15	ENSMUST00000179238.8	2657	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	365.052281690372	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGCCTTGTGTCTCT	6990	False	NA	NA	False	AATAAA	-16	NA	60113449	60138376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60133316_60133326_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUST00000179243.3	chr7	-	2142	9	FSM	ENSMUSG00000039194.17	ENSMUST00000179243.3	2142	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	4.45638586749397	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTTTCATGATGAACTT	NA	False	NA	-15	True	AATAAA	-22	NA	79036796	79024617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79025467_79025644_79025756_79026974_79027134_79029706_79029886_79031380_79031586_79033359_79033489_79033681_79033711_79034406_79034528_79036436
ENSMUST00000179269.3	chr15	-	1800	4	FSM	ENSMUSG00000096883.3	ENSMUST00000179269.3	2588	4	0	788	0	238	multi-exon	FALSE	canonical	3	79	junction_3	2.62466929133727	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGGGATCGATCATCAG	NA	False	NA	-8	True	AATAAA	-22	NA	82097016	82091156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82091749_82091951_82092099_82092663_82092798_82096089
ENSMUST00000179273.2	chr2	-	2424	1	FSM	ENSMUSG00000079043.4	ENSMUST00000179273.2	2424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCACTCGTGGACATTTA	NA	False	NA	NA	False	NA	NA	NA	130458588	130456164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130456200_130458600
ENSMUST00000179297.3	chr19	+	2145	16	FSM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	-137	4027	0	0	multi-exon	FALSE	canonical	3	14	junction_3	36.1106940146852	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCAGCTTCTTGTGTCTG	NA	False	NA	15	True	ATTAAA	-21	NA	10872640	10882896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ENSMUST00000179301.8	chr13	-	2503	21	FSM	ENSMUSG00000009470.18	ENSMUST00000179301.8	2503	21	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_20	72.2616599587914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGATTCAGCATTC	NA	False	NA	NA	False	NA	NA	NA	99027506	98985730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
ENSMUST00000179305.2	chr19	+	4290	14	FSM	ENSMUSG00000025207.17	ENSMUST00000179305.2	4290	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	3.04988116947677	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTGAGTGTCTGCTT	NA	False	NA	1	True	AATAAA	-15	NA	44980574	44991833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987478_44987617_44987680_44989606
ENSMUST00000179323.2	chr4	+	808	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGTCTGTGCCTGATGCC	NA	False	NA	27	True	CATAAA	-18	NA	125990445	125992374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_125990501_125991621
ENSMUST00000179324.2	chr13	+	2764	3	FSM	ENSMUSG00000078952.10	ENSMUST00000179324.2	2764	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	70.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619208	97633515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_97619286_97619456_97619541_97630912
ENSMUST00000179332.8	chr11	-	4536	10	FSM	ENSMUSG00000057181.16	ENSMUST00000179332.8	4536	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	30.825674724525	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGCTTAAATAGTGTT	NA	False	NA	NA	False	TTTAAA	-4	NA	80268841	80251317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264526_80264901_80265044_80266332_80266459_80267628_80267710_80268667
ENSMUST00000179343.3	chr11	-	8319	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGTGCCCTTGCCTCTT	NA	False	NA	-3	True	AATAAA	-23	NA	6425917	6417598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6417600_6425900
ENSMUST00000179344.2	chr12	+	2478	1	FSM	ENSMUSG00000093908.3	ENSMUST00000179344.2	2478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAAAGTTGTTCTTT	NA	False	NA	NA	False	NA	NA	NA	19437809	19440287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_19437800_19440300
ENSMUST00000179348.8	chrX	+	2028	7	FSM	ENSMUSG00000094885.8	ENSMUST00000179348.8	2028	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	5.58022301426107	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTGTGTTTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	147857277	147921148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_147857370_147898081_147898208_147898926_147899007_147902668_147903628_147912815_147912898_147913703_147913754_147920509
ENSMUST00000179353.8	chr1	+	3219	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	266.051999929838	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406714	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUST00000179365.8	chr6	+	2464	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	112.931272118144	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAACTTTGTTCGAT	NA	False	NA	NA	False	ATTAAA	-15	NA	51521502	51567650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUST00000179418.9	chr17	-	481	5	FSM	ENSMUSG00000024309.16	ENSMUST00000179418.9	481	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	500.831808095293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCCTACTTTACAGCCA	NA	False	NA	-19	True	AATAAA	-13	NA	34159284	34157896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159080_34159270
ENSMUST00000179422.8	chr9	-	1462	8	FSM	ENSMUSG00000066839.13	ENSMUST00000179422.8	1462	8	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_7	78.0418516710419	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5921	False	NA	-9	True	AATAAA	-15	NA	21996698	21983541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21996644
ENSMUST00000179445.8	chr11	+	1665	12	FSM	ENSMUSG00000017781.18	ENSMUST00000179445.8	1665	12	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	261.122339207234	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATCTCTGGTTAATAT	NA	False	NA	11	True	AATAAA	-18	NA	75478944	75517556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494306_75494306_75494316_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ENSMUST00000179460.3	chr5	+	1336	1	FSM	ENSMUSG00000095159.3	ENSMUST00000179460.3	1336	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCTTAGTCACTAAAGC	NA	False	NA	NA	False	NA	NA	NA	7229364	7230700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_7229400_7230700
ENSMUST00000179474.9	chr7	-	3454	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	0	7399	0	0	multi-exon	FALSE	canonical	3	88	junction_4	97.1164419950871	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049261	105027816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ENSMUST00000179478.8	chr6	+	1725	4	FSM	ENSMUSG00000042079.14	ENSMUST00000179478.8	956	4	0	-769	0	-468	multi-exon	FALSE	canonical	3	625	junction_1	2053.14430948133	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTCTCATGCAAACTT	NA	False	NA	NA	False	ATTAAA	-14	NA	117893941	117902112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117894033_117894430_117894560_117896059_117896121_117900668
ENSMUST00000179489.8	chr7	+	3608	20	FSM	ENSMUSG00000038563.15	ENSMUST00000179489.8	3608	20	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	25.8006420500325	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGTTTGTTTAATTAAT	NA	False	NA	38	True	AATAAA	-43	NA	82297821	82427060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_82297858_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ENSMUST00000179543.8	chr4	+	2785	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	452.638591421947	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACTCTCGGCATTTT	NA	False	NA	26	True	NA	NA	NA	156320466	156332073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ENSMUST00000179554.3	chr17	-	771	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	0	0	0	0	multi-exon	TRUE	canonical	3	5415	junction_4	1216.82506959711	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6923299	6916336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ENSMUST00000179555.8	chr5	-	6816	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	31	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTCATTTCGGA	NA	False	NA	-3	True	AATAAA	-18	NA	38842169	38825826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38832197_38839827_38840126_38842021
ENSMUST00000179556.2	chr7	+	3049	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	79	1012	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTTTGTCAGGCCTAG	5034	False	NA	22	True	AATAAA	-18	NA	24776708	24781905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24776812_24778959
ENSMUST00000179569.3	chr17	+	771	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	0	0	0	0	multi-exon	TRUE	canonical	3	3024	junction_1	2440.4692555941	1029	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6697510	6703695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
ENSMUST00000179605.9	chr9	-	1888	9	FSM	ENSMUSG00000038895.17	ENSMUST00000179605.9	1888	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.5299640861417	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCAGCCTCTATTTATT	9461	False	NA	NA	False	NA	NA	NA	21982637	21966995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968999_21969099_21969712_21976996_21977213_21979443_21979488_21982344
ENSMUST00000179619.9	chr8	+	3616	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	9.58857801774418	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTGGGTTTGTCT	679	False	NA	46	True	NA	NA	NA	95703734	95740845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ENSMUST00000179636.3	chr10	+	3543	12	FSM	ENSMUSG00000019894.15	ENSMUST00000179636.3	3543	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	32.2574867983458	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGTTCGTGTCCCTCATT	NA	False	NA	NA	False	AATAAA	-15	NA	103203668	103255236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_103204015_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUST00000179718.2	chr1	+	483	1	FSM	ENSMUSG00000096712.2	ENSMUST00000179718.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGACTCCTGCCAGTGTG	NA	False	NA	NA	False	NA	NA	NA	134445818	134446301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_134445800_134446300
ENSMUST00000179735.2	chr10	+	914	1	FSM	ENSMUSG00000095673.2	ENSMUST00000179735.2	914	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGGACCCAGAGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	100202360	100203274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_100202400_100203300
ENSMUST00000179748.8	chr2	+	1590	10	FSM	ENSMUSG00000025817.13	ENSMUST00000179748.8	1590	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	225.953780917937	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1717	False	NA	NA	False	NA	NA	NA	5849844	5873547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869259_5871042_5871053_5871164_5871219_5872899
ENSMUST00000179769.8	chr7	+	3125	14	FSM	ENSMUSG00000008373.17	ENSMUST00000179769.8	3125	14	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_9	235.328122934313	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGAGTTCAATACTTGG	2933	False	NA	NA	False	AATAAA	-20	NA	3632983	3645484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641647_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUST00000179780.3	chr7	-	2404	2	FSM	ENSMUSG00000049580.13	ENSMUST00000179780.3	2404	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAGATGCTCGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	98009286	97999992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98002338_98009227
ENSMUST00000179781.8	chr10	+	1261	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	0	0	0	0	multi-exon	FALSE	canonical	3	6175	junction_5	429.072416835304	4551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540324	79547803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUST00000179800.2	chr7	+	2006	3	FSM	ENSMUSG00000030638.14	ENSMUST00000179800.2	2006	3	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	11	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCAAAGCCCACCTC	NA	False	NA	NA	False	NA	NA	NA	81824589	81919246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_81824768_81909339_81909409_81917487
ENSMUST00000179802.2	chr8	-	7734	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.49443825784929	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTTTAGTCTTTTCTTTC	NA	False	NA	NA	False	AATAAA	-31	NA	105122439	105074822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
ENSMUST00000179820.2	chr19	-	2965	2	FSM	ENSMUSG00000094936.9	ENSMUST00000179820.2	2965	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAATGTTATTTACCTG	NA	False	NA	-11	True	NA	NA	NA	4843911	4840095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4842849_4843699
ENSMUST00000179852.9	chr13	-	1246	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_7	48.9393627307283	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCGTGGCCATGATG	NA	False	NA	-17	True	AGTAAA	-16	NA	43324960	43305215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ENSMUST00000179857.3	chr8	-	4902	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	0	0	0	0	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTGTCTTTCTATTTCA	NA	False	NA	-3	True	NA	NA	NA	127672590	127657416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUST00000179857.3-0	chr8	-	1017	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	0	3885	0	434	multi-exon	FALSE	canonical	3	5050	junction_1	881.47603484156	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAATGTGCGGTGTGTT	NA	False	NA	NA	False	ATTAAA	-30	NA	127672590	127661301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUST00000179865.8	chr11	-	4281	15	FSM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_14	977.081357713797	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACTGAATGTTTTTAC	8136	False	NA	-3	True	ATTAAA	-23	NA	50216500	50184787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216319
ENSMUST00000179865.8-0	chr11	-	3289	15	FSM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	0	992	0	-486	multi-exon	FALSE	canonical	3	497	junction_14	977.081357713797	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8136	False	NA	-2	True	AATAAA	-23	NA	50216500	50185779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216319
ENSMUST00000179869.3	chr13	+	3245	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	79.8526420630178	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151981	120169618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUST00000179891.2	chr13	-	1689	13	FSM	ENSMUSG00000021711.18	ENSMUST00000179891.2	1689	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	299.157242191386	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAACATTTCTTTATTT	NA	False	NA	22	True	AAAACA	-33	NA	104314915	104280461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290727_104290742_104290799_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUST00000179894.2	chr10	+	2526	2	FSM	ENSMUSG00000035242.16	ENSMUST00000179894.2	2526	2	0	0	0	0	multi-exon	FALSE	canonical	3	7170	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662515	80665118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80664468_80664544
ENSMUST00000179907.2	chr18	+	2686	1	FSM	ENSMUSG00000096528.2	ENSMUST00000179907.2	2686	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGGAATAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3471629	3474315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_3471600_3474300
ENSMUST00000179926.9	chr8	+	3470	6	FSM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.91454357496375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAAGAGCATTCTTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	114362218	114370438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ENSMUST00000179953.2	chrX	+	3519	5	FSM	ENSMUSG00000096508.8	ENSMUST00000179953.2	3519	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	73.4825659595526	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAATGGAGAATTAATGA	NA	False	NA	NA	False	AATAAA	-21	NA	134334583	134344429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134334711_134334908_134335028_134339279_134339580_134340880_134341466_134342041
ENSMUST00000179954.8	chr1	+	630	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	8615	junction_3	1758.8270712798	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGGGTTTGGTTTTCCT	NA	False	NA	25	True	AATAAA	-14	NA	39407009	39410446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUST00000179968.8	chr17	+	3203	10	FSM	ENSMUSG00000024457.17	ENSMUST00000179968.8	3203	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	101.9601713573	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAAATTTCAAGACAGT	NA	False	NA	13	True	AATAAA	-20	NA	37148032	37170272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37166962_37166981_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ENSMUST00000179989.2	chr2	+	2826	5	FSM	ENSMUSG00000079442.13	ENSMUST00000179989.2	2826	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	5.71729831301464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATAGTGTCTTCTGGTGC	NA	False	NA	NA	False	NA	NA	NA	32477636	32489087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ENSMUST00000179990.8	chr10	+	566	4	FSM	ENSMUSG00000020022.18	ENSMUST00000179990.8	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	3293	junction_3	309.018877524767	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTCTTGTGCGTTCA	NA	False	NA	13	True	ATTAAA	-13	NA	94034865	94056810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
ENSMUST00000180020.8	chr6	+	2280	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	0	0	0	0	multi-exon	FALSE	canonical	3	4878	junction_1	99	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCACAGCTTATGTACT	NA	False	NA	NA	False	AATAAA	-16	NA	117894254	117902582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117894560_117896059_117896121_117900668
ENSMUST00000180025.8	chrX	+	2812	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	89.3168517134365	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTGTTTGTGTATA	NA	False	NA	7	True	AATAAA	-18	NA	134786599	134791827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ENSMUST00000180036.8	chr10	+	1044	6	FSM	ENSMUSG00000035242.16	ENSMUST00000180036.8	1044	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2881.68367452085	2533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGTGTCCTGCTGC	NA	False	NA	19	True	AATAAA	-19	NA	80662519	80665124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80662740_80664070_80664129_80664129_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUST00000180043.8	chr17	+	1447	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	19.7434940057619	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2976	False	NA	30	True	AATAAA	-19	NA	35055994	35058162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ENSMUST00000180045.8	chr2	-	4050	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	0	0	0	0	multi-exon	FALSE	canonical	1	103	junction_1	53.6273147648555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTGAGCTGCCTACTG	NA	False	NA	44	True	NA	NA	NA	73605690	73441003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ENSMUST00000180067.2	chr8	-	1077	1	FSM	ENSMUSG00000094568.2	ENSMUST00000180067.2	1077	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCCTTGTTTTATGTG	NA	False	NA	NA	False	NA	NA	NA	42111706	42110629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_42110600_42111700
ENSMUST00000180072.8	chr11	-	486	5	FSM	ENSMUSG00000034566.11	ENSMUST00000180072.8	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	2962	junction_4	275.878936310839	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCTGGGACGGAGCCC	NA	False	NA	-62	True	AAAAAG	-43	NA	115309333	115306573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211
ENSMUST00000180077.7	chr17	+	602	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	686	junction_1	395.694563394546	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGTGTGTGGGTCTGCAG	NA	False	NA	NA	False	AATAAA	-22	NA	79223928	79227735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUST00000180086.3	chr15	+	2055	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTGGTGCGTTTTTCT	1147	False	NA	21	True	AATAAA	-17	NA	78912649	78914704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78912600_78914700
ENSMUST00000180088.2	chr11	+	1921	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_8	26.2963875846094	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGCTGTGTATAGTTAG	1582	False	NA	21	True	AATAAA	-12	NA	4136821	4165502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ENSMUST00000180095.4	chr6	+	1475	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	3449	junction_8	252.103029533562	2824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	False	NA	27	True	AATAAA	-17	NA	124908394	124913108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ENSMUST00000180159.8	chr15	+	489	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTTCTATTCAATGT	109	False	NA	NA	False	ATTAAA	-12	NA	36174155	36177153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
ENSMUST00000180159.8-0	chr15	+	404	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	23	62	0	-62	multi-exon	FALSE	canonical	3	328	junction_3	234.864973028239	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGGCTTAATTTATTGC	132	False	NA	NA	False	TATAAA	-17	NA	36174178	36177091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
ENSMUST00000180180.8	chr9	-	1676	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	49.2772767104677	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGGCCCTGTGGCTTC	5885	False	NA	-9	True	AATAAA	-15	NA	21996734	21983541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
ENSMUST00000180198.2	chrX	+	3836	5	FSM	ENSMUSG00000094004.8	ENSMUST00000180198.2	3836	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	73.5272058492637	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTTTATTGGTTCTT	NA	False	NA	NA	False	ATTAAA	-10	NA	134274032	134284142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_134274160_134274357_134274477_134278675_134278976_134280276_134280862_134281437
ENSMUST00000180210.3	chr8	+	597	1	FSM	ENSMUSG00000094530.3	ENSMUST00000180210.3	597	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACTGGACCATTTTTC	NA	False	NA	NA	False	NA	NA	NA	129979478	129980075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_129979500_129980100
ENSMUST00000180248.8	chr19	-	2610	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_3	29.8923996285938	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTCTTGGGTGAC	NA	False	NA	NA	False	AATAAA	-13	NA	4843929	4834320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
ENSMUST00000180248.8-0	chr19	-	1729	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	21	860	0	0	multi-exon	FALSE	canonical	3	26	junction_3	29.8923996285938	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTGTGCTTTGAGAA	NA	False	NA	-4	True	AATAAA	-16	NA	4843908	4835180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
ENSMUST00000180252.3	chr17	-	4839	3	FSM	ENSMUSG00000096847.3	ENSMUST00000180252.3	4839	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTCCCTCAGTGACACT	NA	False	NA	-11	True	AATAAA	-20	NA	45860603	45852877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_45856881_45857686_45858128_45860208
ENSMUST00000180255.2	chr4	+	345	1	FSM	ENSMUSG00000094344.2	ENSMUST00000180255.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTTTGTTAAGTTGGC	38	False	NA	-6	True	NA	NA	NA	32964887	32965232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_32964900_32965200
ENSMUST00000180260.8	chr11	-	4128	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_12	9.91208520476776	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAATTGTGGAGAAAGT	NA	False	NA	-15	True	AATAAA	-9	NA	23583631	23523787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ENSMUST00000180278.2	chr4	+	2792	11	FSM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6155546251715	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACACTTTTGTTTTGG	NA	False	NA	9	True	NA	NA	NA	99082383	99148020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
ENSMUST00000180283.2	chr17	-	2368	9	FSM	ENSMUSG00000012296.17	ENSMUST00000180283.2	2368	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	136.842461885922	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATCCCCTTTTTGCT	5806	False	NA	-7	True	AATAAA	-41	NA	46593952	46568776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593885
ENSMUST00000180286.2	chr2	-	1531	4	FSM	ENSMUSG00000027341.11	ENSMUST00000180286.2	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	263.641591728029	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4889	False	NA	-4	True	TATAAA	-18	NA	132089708	132081413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089552
ENSMUST00000180341.2	chr6	+	1922	1	FSM	ENSMUSG00000042079.14	ENSMUST00000180341.2	1922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5024	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	204	False	NA	NA	False	AATAAA	-17	NA	117900661	117902583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117900700_117902600
ENSMUST00000180347.2	chr2	+	2493	1	FSM	ENSMUSG00000096484.2	ENSMUST00000180347.2	2493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAGAAGCAAAGAAGCC	NA	False	NA	NA	False	NA	NA	NA	83803466	83805959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_83803500_83806000
ENSMUST00000180358.3	chr14	-	2032	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	15.9910689359494	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTCTATTTCCAAAT	1888	False	NA	-10	True	AATAAA	-17	NA	70680730	70676235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
ENSMUST00000180359.8	chr14	+	2508	7	FSM	ENSMUSG00000040997.15	ENSMUST00000180359.8	2508	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	134.648616777151	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAGTATTAACTCCTGG	NA	False	NA	-78	True	TATAAA	-16	NA	54491644	54506532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54491929_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUST00000180365.9	chr9	-	2014	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	18.6463803457937	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACGCCCATGGTG	6086	False	NA	-20	True	AATAAA	-13	NA	21504106	21499981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ENSMUST00000180376.8	chr5	+	5536	21	FSM	ENSMUSG00000037210.17	ENSMUST00000180376.8	5536	21	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	17.141980632354	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1443	False	NA	16	True	AATACA	-15	NA	34527276	34643800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ENSMUST00000180403.3	chr13	-	1161	4	FSM	ENSMUSG00000097483.3	ENSMUST00000180403.3	1519	4	364	-6	0	0	multi-exon	FALSE	canonical	3	52	junction_2	5.09901951359278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAACTGTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	66667587	66651223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66652035_66652807_66652875_66653161_66653268_66667410
ENSMUST00000180411.3	chr8	+	2311	2	FSM	ENSMUSG00000097042.3	ENSMUST00000180411.3	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTCAGTTGTTTCTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	22970306	22973348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_22972071_22972801
ENSMUST00000180422.2	chr13	+	955	1	FSM	ENSMUSG00000097906.2	ENSMUST00000180422.2	955	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCGCCAAAGCAACCAAGT	NA	False	NA	NA	False	NA	NA	NA	67958364	67959319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67958400_67959300
ENSMUST00000180449.2	chr15	-	441	1	FSM	ENSMUSG00000068226.4	ENSMUST00000180449.2	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAGTCTGGCTGGGGAC	NA	False	NA	NA	False	NA	NA	NA	78439048	78438607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78438600_78439000
ENSMUST00000180458.9	chr12	+	1383	3	FSM	ENSMUSG00000097929.10	ENSMUST00000180458.9	3282	3	80	1819	80	-1817	multi-exon	FALSE	canonical	3	14	junction_1	9	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGAGAAGCACTTCTG	NA	False	NA	35	True	AATAAA	-29	NA	105302932	105348372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105303217_105303488_105303819_105347603
ENSMUST00000180502.8	chr7	-	6163	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTGCAAACTCTTAATG	NA	False	NA	NA	False	AATAAA	-43	NA	27713540	27684278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ENSMUST00000180502.8-0	chr7	-	3949	6	FSM	ENSMUSG00000096916.8	ENSMUST00000180502.8	6163	6	0	2214	0	1644	multi-exon	FALSE	canonical	3	64	junction_5	35.6482818660311	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713540	27686492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713440
ENSMUST00000180531.2	chr15	-	1270	2	FSM	ENSMUSG00000033075.18	ENSMUST00000180531.2	1270	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGAAAAAGGAGTTGG	6407	False	NA	NA	False	NA	NA	NA	97991186	97986437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97987685_97991163
ENSMUST00000180562.2	chr2	+	1361	1	FSM	ENSMUSG00000052368.3	ENSMUST00000180562.2	1361	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGTCTTTATTCAC	NA	False	NA	21	True	AATAAA	-33	NA	168861944	168863305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_168861900_168863300
ENSMUST00000180563.10	chr9	-	947	4	FSM	ENSMUSG00000097195.11	ENSMUST00000180563.10	947	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	498.70855439046	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88403502_88403702_88403770_88404359_88404435_88404536
ENSMUST00000180572.2	chr4	-	6891	36	FSM	ENSMUSG00000041936.19	ENSMUST00000180572.2	6891	36	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_32	92.1507460631763	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTACCTGCCTGAGTAG	NA	False	NA	NA	False	NA	NA	NA	156281945	156250234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
ENSMUST00000180611.8	chr18	+	11319	43	FSM	ENSMUSG00000037416.14	ENSMUST00000180611.8	11319	43	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_4	23.9744407551836	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCGCATGCTTTTGT	NA	False	NA	14	True	AATAAA	-15	NA	49965736	50097321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_49966244_49973453_49973580_49976852_49976925_49979651_49979731_49981734_49981862_49984496_49984564_49985312_49985492_49990299_49990490_49992182_49992352_49995971_49996185_49997014_49997269_49997376_49998062_49998149_49998272_50000871_50000962_50001041_50001145_50003939_50004060_50004636_50004859_50010749_50012433_50013801_50013910_50021782_50021953_50022529_50022628_50023682_50023849_50024457_50024720_50026285_50027365_50028048_50028241_50031770_50031848_50035327_50035456_50035846_50036096_50045709_50045865_50050645_50050789_50052954_50053041_50053896_50054099_50055664_50055783_50064977_50065065_50067650_50067773_50068258_50068401_50072615_50072677_50084262_50084391_50088883_50088977_50090368_50090461_50091463_50091517_50094124_50094343_50095239
ENSMUST00000180657.2	chr15	-	3806	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180657.2	3806	19	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_18	49.2407790452959	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTTGTTGTTTGTAGC	6461	False	NA	NA	False	TTTAAA	-5	NA	97991132	97939613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
ENSMUST00000180705.2	chr7	+	706	2	FSM	ENSMUSG00000097277.8	ENSMUST00000180705.2	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCATTGACAGTAAGGTAA	NA	False	NA	NA	False	NA	NA	NA	81178147	81179259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_81178689_81179094
ENSMUST00000180716.8	chr15	-	3882	19	FSM	ENSMUSG00000033075.18	ENSMUST00000180716.8	3882	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_15	62.0252089332223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCTCCACTCCAGCAGCC	6143	False	NA	NA	False	AATGAA	-6	NA	97991450	97939273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97974792_97974924_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ENSMUST00000180730.3	chr15	+	2392	3	FSM	ENSMUSG00000097493.4	ENSMUST00000180730.3	3074	3	682	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTGGTGAGTTCCTGTC	NA	False	NA	NA	False	AATAAA	-15	NA	60694801	60700499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_60696633_60699180_60699212_60699969
ENSMUST00000180752.2	chr14	-	1972	2	FSM	ENSMUSG00000097743.2	ENSMUST00000180752.2	1972	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGGATCATTTTCT	NA	False	NA	-3	True	AATAAA	-15	NA	56936818	56933736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_56935496_56936605
ENSMUST00000180765.2	chr19	-	1073	6	FSM	ENSMUSG00000037349.10	ENSMUST00000180765.2	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.0427428710946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	6965	False	NA	-3	True	AATAAA	-17	NA	6973485	6970385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973382
ENSMUST00000180779.2	chr5	-	3486	3	FSM	ENSMUSG00000097772.8	ENSMUST00000180779.2	3486	3	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAGAGAAGGGGGAAG	NA	False	NA	NA	False	NA	NA	NA	100577375	100571510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100574664_100576955_100577098_100577184
ENSMUST00000180786.2	chr11	+	1834	1	FSM	ENSMUSG00000020829.10	ENSMUST00000180786.2	1834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCCAGCTGGTTTCTTCC	298	False	NA	NA	False	NA	NA	NA	78361051	78362885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_78361100_78362900
ENSMUST00000180787.3	chrX	-	2298	1	FSM	ENSMUSG00000096966.3	ENSMUST00000180787.3	2298	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAAGGTCCATCCAGG	NA	False	NA	NA	False	NA	NA	NA	72442342	72440044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72440000_72442300
ENSMUST00000180830.3	chr16	+	3557	5	FSM	ENSMUSG00000097290.10	ENSMUST00000180830.3	3557	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	55.9838146253004	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTGTGGTGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	21613141	21624880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21621702
ENSMUST00000180856.2	chr8	+	608	2	FSM	ENSMUSG00000031818.13	ENSMUST00000180856.2	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	8115	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGCTGGGATTTGAACTC	NA	False	NA	NA	False	NA	NA	NA	121394999	121396560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121395095_121396047
ENSMUST00000180879.8	chr7	+	725	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	29.9777695412228	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAATTTTTTGGGTAT	NA	False	NA	4	True	AATAAA	-9	NA	81173318	81181242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
ENSMUST00000180896.8	chr6	+	2099	4	FSM	ENSMUSG00000097048.8	ENSMUST00000180896.8	2099	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	16.5126214353344	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	False	NA	9	True	NA	NA	NA	86503252	86541431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86504957_86509174_86509290_86540413_86540520_86541257
ENSMUST00000180940.2	chr13	+	627	1	FSM	ENSMUSG00000060198.8	ENSMUST00000180940.2	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2644	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGCGTAGTGTAATA	NA	False	NA	NA	False	NA	NA	NA	26676536	26677163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_26676500_26677200
ENSMUST00000180967.3	chr16	-	1580	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACACCTTTAAATAATA	6571	False	NA	NA	False	AATAAA	-28	NA	93591789	93589023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_93590271_93591456
ENSMUST00000181026.2	chr8	+	438	2	FSM	ENSMUSG00000031818.13	ENSMUST00000181026.2	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	9369	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121399890	121400946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121400092_121400709
ENSMUST00000181036.2	chr10	+	1197	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181036.2	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGCCGCTGATGACTGA	NA	False	NA	NA	False	AATAAA	-45	NA	104030317	104032383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_104030363_104031231
ENSMUST00000181045.8	chr5	+	3967	4	FSM	ENSMUSG00000097908.8	ENSMUST00000181045.8	3967	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	24.0878023535196	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCAGCCTCGCTTTTTT	NA	False	NA	24	True	AATAAA	-13	NA	136947999	136965960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962592
ENSMUST00000181091.8	chr10	-	1876	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	660.841047453924	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	False	NA	-17	True	AATAAA	-15	NA	93725637	93696790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715436_93715934_93716001_93722855_93722964_93725399
ENSMUST00000181172.2	chr8	+	578	3	FSM	ENSMUSG00000031818.13	ENSMUST00000181172.2	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	8471	junction_1	449	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGCCGGCTCCCTGC	NA	False	NA	-66	True	NA	NA	NA	121399328	121400852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121399632_121399959_121400092_121400709
ENSMUST00000181181.2	chr8	-	1229	1	FSM	ENSMUSG00000078967.6	ENSMUST00000181181.2	1229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	93443603	93442374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_93442400_93443600
ENSMUST00000181217.8	chr10	-	1984	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181217.8	1984	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	666.978530389097	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	False	NA	-17	True	AATAAA	-15	NA	93725646	93696790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715535_93715934_93716001_93722855_93722964_93725399
ENSMUST00000181224.2	chr7	-	1380	3	FSM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	0	-724	0	0	multi-exon	FALSE	canonical	3	19	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTAGTGGTCTTGCCC	NA	False	NA	0	True	NA	NA	NA	75431847	75418785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_75419986_75430372_75430505_75431799
ENSMUST00000181225.2	chr6	+	1499	3	FSM	ENSMUSG00000097616.8	ENSMUST00000181225.2	1499	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTGTTATGGATGATAG	28	False	NA	NA	False	AATAAA	-22	NA	13871567	13896421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_13871627_13881271_13881381_13895090
ENSMUST00000181233.2	chr12	+	438	1	FSM	ENSMUSG00000096942.2	ENSMUST00000181233.2	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2460	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGGATGCTGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	110864547	110864985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110864500_110865000
ENSMUST00000181253.10	chr12	+	2368	11	FSM	ENSMUSG00000097451.12	ENSMUST00000181253.10	2368	11	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	76.4947056991528	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTGTGAAGTACAA	2865	False	NA	NA	False	NA	NA	NA	109612563	109628143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ENSMUST00000181391.8	chr13	+	2399	4	FSM	ENSMUSG00000030446.18	ENSMUST00000181391.8	2399	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.58653778449403	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTAGTATTGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	67961858	67975121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67962016_67970359_67970487_67971218_67971315_67973102
ENSMUST00000181426.4	chr13	-	519	2	FSM	ENSMUSG00000097562.4	ENSMUST00000181426.4	519	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAAGTTTCTTCCTCG	NA	False	NA	NA	False	AATAAA	-28	NA	65739375	65738106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65738599_65739348
ENSMUST00000181448.3	chr9	-	602	5	FSM	ENSMUSG00000097177.9	ENSMUST00000181448.3	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	50.4746223363781	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGGTTATGAGCCATT	NA	False	NA	NA	False	TATAAA	-28	NA	88740923	88739284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88739637_88739866_88739925_88740278_88740354_88740442_88740498_88740861
ENSMUST00000181466.2	chr10	-	1334	4	FSM	ENSMUSG00000097076.2	ENSMUST00000181466.2	1334	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTAAGTCAAGCATCT	9459	False	NA	NA	False	AATAAA	-17	NA	84389202	84383280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_84384062_84385083_84385495_84388511_84388575_84389123
ENSMUST00000181489.3	chr1	+	3849	2	FSM	ENSMUSG00000097814.6	ENSMUST00000181489.3	3849	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATCATCTCTATTATTT	NA	False	NA	5	True	NA	NA	NA	96799945	96808959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_96800394_96805558
ENSMUST00000181516.2	chr13	-	1094	3	FSM	ENSMUSG00000097483.3	ENSMUST00000181516.2	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	24	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGAACTGTTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	66667587	66651223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66652035_66653161_66653268_66667410
ENSMUST00000181560.2	chr4	+	1048	2	FSM	ENSMUSG00000074088.7	ENSMUST00000181560.2	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCTGGCTCCATCAATG	NA	False	NA	NA	False	NA	NA	NA	130278814	130282421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_130279809_130282367
ENSMUST00000181562.8	chr14	-	1945	7	FSM	ENSMUSG00000095295.9	ENSMUST00000181562.8	1945	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.50640709864771	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGTGTATGCTTCTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	16968099	16946845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_16947979_16950529_16950713_16951388_16951521_16952473_16952637_16953364_16953500_16966519_16966634_16968014
ENSMUST00000181586.8	chr8	+	765	5	FSM	ENSMUSG00000031818.13	ENSMUST00000181586.8	765	5	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	3735.25865904893	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121394960	121400946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_121395115_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUST00000181614.2	chr10	-	548	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181614.2	548	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGACTGCCTTGGTTTT	NA	False	NA	-8	True	NA	NA	NA	22024722	22020200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_22020414_22024387
ENSMUST00000181615.8	chr10	+	1258	2	FSM	ENSMUSG00000090854.10	ENSMUST00000181615.8	1258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGCCGCTGATGACTGA	NA	False	NA	NA	False	AATAAA	-45	NA	104029902	104032383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_104030009_104031231
ENSMUST00000181620.3	chr5	+	3805	4	FSM	ENSMUSG00000097392.5	ENSMUST00000181620.3	3805	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.68178700572909	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGCTTGGTTCTTTTTTT	NA	False	NA	4	True	AATAAA	-20	NA	104673600	104702073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104673839_104686691_104686840_104689031_104689129_104698751
ENSMUST00000181621.4	chr2	-	139	1	FSM	ENSMUSG00000097052.4	ENSMUST00000181621.4	139	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGCCGTGGTGGGAAG	NA	False	NA	-5	True	NA	NA	NA	26527997	26527858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_26527900_26528000
ENSMUST00000181635.8	chrX	-	4306	4	FSM	ENSMUSG00000087403.10	ENSMUST00000181635.8	398	4	-7	-3901	0	0	multi-exon	FALSE	canonical	3	22	junction_1	27.8128667266709	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACTGTGTGACTTCC	NA	False	NA	NA	False	NA	NA	NA	151110466	151077823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151081871_151103205_151103281_151110156_151110236_151110361
ENSMUST00000181645.8	chr10	+	1579	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	39.8708853676464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTGCTCCAGAAGTTT	NA	False	NA	5	True	AATAAA	-15	NA	22034467	22059816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUST00000181658.2	chr17	-	1179	5	FSM	ENSMUSG00000097624.3	ENSMUST00000181658.2	1179	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	9.14808723176599	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTCTCTTTTCTTTCT	NA	False	NA	-8	True	GATAAA	-12	NA	15461045	15451846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_15452674_15453041_15453145_15454190_15454265_15460531_15460624_15460962
ENSMUST00000181677.2	chr10	-	617	2	FSM	ENSMUSG00000097327.8	ENSMUST00000181677.2	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTGGGACCCCTAATG	NA	False	NA	NA	False	NA	NA	NA	22024509	21993260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_21993756_22024387
ENSMUST00000181742.2	chr13	+	1723	2	FSM	ENSMUSG00000097848.3	ENSMUST00000181742.2	1723	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACGACTGGTCTTTAGC	6940	False	NA	NA	False	NA	NA	NA	99237213	99244088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_99237334_99242485
ENSMUST00000181767.8	chr13	-	2656	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	7.71722460186015	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTGGTCATAGTGTTTA	9222	False	NA	NA	False	NA	NA	NA	67674296	67663899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
ENSMUST00000181809.2	chr3	+	2559	2	FSM	ENSMUSG00000097532.3	ENSMUST00000181809.2	2559	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCAGTGTCTTCCTCT	NA	False	NA	8	True	AGTAAA	-22	NA	95334981	95338398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95335007_95335864
ENSMUST00000181810.8	chr11	-	1435	7	FSM	ENSMUSG00000097328.8	ENSMUST00000181810.8	1435	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	8.13941029804985	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGGTACCAGAAAAAAAA	5412	False	NA	NA	False	AATAGA	-6	NA	69586675	69577075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ENSMUST00000181818.2	chr7	+	1461	1	FSM	ENSMUSG00000097530.2	ENSMUST00000181818.2	1461	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCATTCTGGGAATTGTT	NA	False	NA	NA	False	NA	NA	NA	72322565	72324026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_72322600_72324000
ENSMUST00000181833.2	chr3	-	986	2	FSM	ENSMUSG00000097639.3	ENSMUST00000181833.2	986	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCTCCAAATCCTGAA	NA	False	NA	-3	True	NA	NA	NA	41447627	41443238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41444172_41447574
ENSMUST00000181873.8	chr5	-	626	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	12.3389626792531	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTAGAATGTTGTGTT	NA	False	NA	-7	True	AATAAA	-31	NA	100577394	100568700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ENSMUST00000181892.9	chr13	-	5293	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGAGAACTGTAGTTTT	NA	False	NA	NA	False	NA	NA	NA	67701949	67686759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
ENSMUST00000181892.9-0	chr13	-	4004	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	692	597	0	-597	multi-exon	FALSE	canonical	3	55	junction_1	6.68331255192114	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTCATGGCATTTA	NA	False	NA	0	True	NA	NA	NA	67701257	67687356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
ENSMUST00000181906.3	chr10	-	3877	3	FSM	ENSMUSG00000097164.3	ENSMUST00000181906.3	6566	3	0	2689	0	-2689	multi-exon	FALSE	canonical	3	9	junction_2	6	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGACCACATATCTCCA	NA	False	NA	-13	True	AATAAA	-15	NA	94524438	94509575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_94512992_94514192_94514310_94524094
ENSMUST00000181935.2	chr15	-	378	1	FSM	ENSMUSG00000067870.6	ENSMUST00000181935.2	378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1458	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTCGTGTCAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	90648859	90648481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_90648500_90648900
ENSMUST00000181949.3	chr1	-	2052	4	FSM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	26.1576417557513	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAAATAGATTCTGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	57416703	57398380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_57399823_57401724_57401923_57414406_57414679_57416563
ENSMUST00000181960.3	chr16	+	574	3	FSM	ENSMUSG00000097290.10	ENSMUST00000181960.3	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	32	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGTTGAAAGGTCCATG	NA	False	NA	30	True	AATAAA	-35	NA	21613111	21627790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21613197_21614599_21614726_21627427
ENSMUST00000181967.3	chr9	+	843	3	FSM	ENSMUSG00000097651.3	ENSMUST00000181967.3	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTGGCTGATACTTGCT	NA	False	NA	16	True	NA	NA	NA	58362404	58376918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_58362640_58374083_58374201_58376427
ENSMUST00000181969.8	chr14	+	2532	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	0	0	0	0	multi-exon	TRUE	canonical	3	271	junction_7	54.1807255433901	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTATTTCTTGTATT	NA	False	NA	10	True	AATAAA	-17	NA	105496007	105546732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ENSMUST00000181969.8-1	chr14	+	1925	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	180	427	0	0	multi-exon	FALSE	canonical	3	271	junction_7	54.1807255433901	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCTCGTTTAGTGATT	NA	False	NA	6	True	AATAAA	-16	NA	105496187	105546305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ENSMUST00000181974.8	chr10	+	3751	20	FSM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_16	12.5742118370934	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCTGCAAATTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	69761783	69860473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ENSMUST00000181998.8	chr7	-	5149	27	FSM	ENSMUSG00000045659.19	ENSMUST00000181998.8	5149	27	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	26.6807778245958	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTCCTGGCTCTTGCT	NA	False	NA	-6	True	ATTAAA	-13	NA	115907611	115722727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ENSMUST00000182017.2	chr7	-	453	1	FSM	ENSMUSG00000069972.7	ENSMUST00000182017.2	453	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGCTGTTGTGTGCACA	NA	False	NA	NA	False	NA	NA	NA	88180106	88179653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_88179700_88180100
ENSMUST00000182029.8	chr10	+	3825	19	FSM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_18	22.7009544586419	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATGCAGATGTATATA	NA	False	NA	15	True	AATAAA	-20	NA	69761634	69851635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838432_69840439_69840822_69851400
ENSMUST00000182031.2	chr17	+	1755	5	FSM	ENSMUSG00000071054.13	ENSMUST00000182031.2	1755	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_2	23.466731770743	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGCACTAAGGAGTGAG	7828	False	NA	31	True	NA	NA	NA	56891824	56903523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651
ENSMUST00000182047.2	chr5	+	2944	8	FSM	ENSMUSG00000029110.14	ENSMUST00000182047.2	2944	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1054.04635300622	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAACTAAGTATCTTT	NA	False	NA	13	True	AATAAA	-3	NA	34494275	34510768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34494442_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
ENSMUST00000182061.8	chr14	+	4756	23	FSM	ENSMUSG00000004562.17	ENSMUST00000182061.8	4756	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	6.51951932518073	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGACTCTGAGGAGCTCG	NA	False	NA	3	True	ATTAAA	-15	NA	52222387	52243080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52242068_52242200_52242445_52242493_52242797
ENSMUST00000182066.8	chr18	-	4506	16	FSM	ENSMUSG00000041225.17	ENSMUST00000182066.8	4506	16	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_14	41.3229019095008	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTTTTTTGT	NA	False	NA	7	True	NA	NA	NA	6112363	6024426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684
ENSMUST00000182088.9	chr12	+	2361	11	FSM	ENSMUSG00000097451.12	ENSMUST00000182088.9	1627	11	0	-734	0	0	multi-exon	FALSE	canonical	3	17	junction_8	192.423075539292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624491_109624556_109626156_109626242_109627179
ENSMUST00000182111.8	chr7	-	585	3	FSM	ENSMUSG00000051811.15	ENSMUST00000182111.8	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	77.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4754975_4755059_4755161_4755722
ENSMUST00000182145.3	chr8	+	1402	1	FSM	ENSMUSG00000098211.3	ENSMUST00000182145.3	1402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAGGGTCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	122268818	122270220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_122268800_122270200
ENSMUST00000182159.2	chr17	+	1998	1	FSM	ENSMUSG00000071054.13	ENSMUST00000182159.2	1998	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAGGTGAGCA	NA	False	NA	19	True	NA	NA	NA	56901513	56903511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56901500_56903500
ENSMUST00000182161.2	chr10	+	4482	1	FSM	ENSMUSG00000098188.2	ENSMUST00000182161.2	4482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGAGTGTCTGTGGTTC	NA	False	NA	5	True	AATAAA	-22	NA	59057774	59062256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59057800_59062300
ENSMUST00000182172.2	chr15	-	2584	1	FSM	ENSMUSG00000098176.3	ENSMUST00000182172.2	2584	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGTTGTCTTGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	75854304	75851720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75851700_75854300
ENSMUST00000182174.8	chr8	+	498	4	FSM	ENSMUSG00000097248.10	ENSMUST00000182174.8	498	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	31.0590834807897	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTGTGTCCATTCCTCC	198	False	NA	6	True	AATAAA	-14	NA	88199439	88252181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_88199589_88248363_88248442_88250923_88251056_88252042
ENSMUST00000182183.8	chr10	+	838	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	103.215658803411	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGGTTTGTTGACCAA	NA	False	NA	13	True	AATAAA	-16	NA	88037013	88081868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
ENSMUST00000182203.3	chr2	-	2232	14	FSM	ENSMUSG00000027297.16	ENSMUST00000182203.3	2232	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	7.17243243134772	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTCAGTTCTCTGAGT	NA	False	NA	-12	True	NA	NA	NA	119589006	119581808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_119582416_119582546_119582638_119582711_119582847_119582977_119583080_119583175_119583269_119583406_119583505_119583594_119583725_119583907_119583973_119584095_119584187_119584652_119584846_119585058_119585155_119585611_119585765_119586095_119586195_119588727
ENSMUST00000182209.8	chr17	+	1977	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	0	0	0	0	multi-exon	FALSE	canonical	3	3602	junction_2	267.432701814868	5068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47904394	47910614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000182213.8	chr18	-	4162	20	FSM	ENSMUSG00000041225.17	ENSMUST00000182213.8	4162	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	53.935942307298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGTGCGTTTTAGTT	-13	True	NA	-3	True	AATAAA	-34	NA	6135960	6025196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6056978_6056994_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUST00000182232.9	chr9	-	826	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	292.278634183205	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCAATTCTTTTTGTG	NA	False	NA	-7	True	AATAAA	-40	NA	88405027	88403102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ENSMUST00000182232.9-0	chr9	-	741	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	83	2	0	0	multi-exon	FALSE	canonical	3	405	junction_2	292.278634183205	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ENSMUST00000182255.8	chr12	+	4672	10	FSM	ENSMUSG00000010608.16	ENSMUST00000182255.8	4672	10	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	34.5664505868456	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAGAAGAAAGAAGAAGAG	923	False	NA	NA	False	AAGAAA	-30	NA	83689472	83715257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83711034_83714865_83715083_83715192
ENSMUST00000182260.8	chr10	-	2338	12	FSM	ENSMUSG00000047417.19	ENSMUST00000182260.8	2338	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	107.352281748895	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	3899	False	NA	-5	True	AATAAA	-14	NA	80383755	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606
ENSMUST00000182272.2	chr7	-	519	2	FSM	ENSMUSG00000051811.15	ENSMUST00000182272.2	519	2	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGCACTTGAGCGCT	NA	False	NA	NA	False	NA	NA	NA	4755527	4754923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4754975_4755059
ENSMUST00000182276.2	chr19	-	4066	10	FSM	ENSMUSG00000025077.15	ENSMUST00000182276.3	4087	10	21	0	21	0	multi-exon	FALSE	canonical	3	30	junction_9	50.5063252364383	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGCATATTTGGATGGG	7995	False	NA	-10	True	AATAAA	-18	NA	56536654	56517600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536618
ENSMUST00000182300.2	chr12	+	694	2	FSM	ENSMUSG00000097391.9	ENSMUST00000182300.2	694	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTTGCGTGTCTGTATT	4789	False	NA	21	True	AATAAA	-21	NA	109714397	109715892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_109714728_109715528
ENSMUST00000182309.8	chr5	-	1595	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_7	46.2523939987681	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACCCACTTCCATTAAAC	4321	False	NA	NA	False	NA	NA	NA	123887477	123867069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ENSMUST00000182328.8	chr7	-	1391	7	FSM	ENSMUSG00000030591.18	ENSMUST00000182328.8	1391	7	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	28879977	28873612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUST00000182371.8	chr9	-	2986	24	FSM	ENSMUSG00000032580.13	ENSMUST00000182371.8	2986	24	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	139.730783549852	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTTCCTGTGTCTTTA	9721	False	NA	-6	True	AAGAAA	-12	NA	107648179	107617698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ENSMUST00000182378.8	chr17	+	3628	14	FSM	ENSMUSG00000071054.13	ENSMUST00000182378.8	3628	14	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_3	50.0930495125567	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGCCCTTTACTTCAG	NA	False	NA	21	True	AATAAA	-12	NA	56904769	56913280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ENSMUST00000182383.8	chr18	-	4711	17	FSM	ENSMUSG00000041225.17	ENSMUST00000182383.8	2500	17	-82	-2129	0	0	multi-exon	FALSE	canonical	3	59	junction_13	36.3438440454501	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTTTTTTGT	-23	True	NA	7	True	NA	NA	NA	6135970	6024426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUST00000182393.8	chr1	-	6367	21	FSM	ENSMUSG00000040225.16	ENSMUST00000182393.8	6367	21	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	45.8240930079363	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	162532761	162499356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_162501226_162501671_162501721_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507053_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937
ENSMUST00000182402.8	chr17	+	1275	10	FSM	ENSMUSG00000098090.9	ENSMUST00000182402.8	1275	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	42.4223328093547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGGTGTCCCCTCC	NA	False	NA	NA	False	AATAAA	-11	NA	95057527	95082557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ENSMUST00000182415.2	chr8	-	992	1	FSM	ENSMUSG00000052825.7	ENSMUST00000182415.2	992	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTGCTAATCACCATT	NA	False	NA	NA	False	NA	NA	NA	52650091	52649099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_52649100_52650100
ENSMUST00000182431.8	chr19	-	558	5	FSM	ENSMUSG00000042694.18	ENSMUST00000182431.8	558	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	57.4429064376099	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCAGGCCAGTCTCCACC	NA	False	NA	NA	False	NA	NA	NA	47525403	47510570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47510637_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ENSMUST00000182433.8	chr5	-	1195	7	FSM	ENSMUSG00000035325.17	ENSMUST00000182433.8	1195	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	364.036361126498	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTTAGTCTTTATTTA	NA	False	NA	-8	True	ATTAAA	-18	NA	100521343	100509508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100517454_100517494_100521283
ENSMUST00000182467.2	chr9	-	1008	1	FSM	ENSMUSG00000098076.2	ENSMUST00000182467.2	1008	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTGGACCACCCACC	NA	False	NA	NA	False	NA	NA	NA	51914581	51913573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_51913600_51914600
ENSMUST00000182481.8	chr19	+	8357	33	FSM	ENSMUSG00000024998.18	ENSMUST00000182481.8	8357	33	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_11	5.14743564797074	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTCTAAGAAGCAAAAG	NA	False	NA	NA	False	NA	NA	NA	38469568	38771874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38469805_38512358_38513897_38608886_38609176_38640238_38640556_38686893_38687040_38690263_38690523_38693683_38693890_38705007_38705684_38707999_38708183_38709417_38709536_38710255_38710365_38713144_38713268_38713353_38713491_38715211_38715451_38717126_38717189_38717270_38717437_38724874_38724983_38726366_38726484_38727691_38727851_38734209_38734340_38737735_38737858_38738884_38739003_38747258_38747391_38748422_38748711_38753743_38753908_38755575_38755838_38757894_38758014_38758790_38758920_38761263_38761474_38766300_38766460_38768209_38768429_38769003_38769227_38770980
ENSMUST00000182487.8	chr7	-	3476	23	FSM	ENSMUSG00000045659.19	ENSMUST00000182487.8	3476	23	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_11	21.5147460482494	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTCCACAACTCCAGCC	NA	False	NA	NA	False	GGGGCT	-1	NA	115907590	115734167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
ENSMUST00000182490.2	chr7	-	2872	5	FSM	ENSMUSG00000030380.18	ENSMUST00000182490.2	2872	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.04633819296811	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCACATTTCTTCTGCCC	NA	False	NA	NA	False	AATAAA	-19	NA	12787611	12777073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12778628_12785417_12785539_12785659_12785731_12786109_12786294_12786669
ENSMUST00000182511.8	chr7	-	4502	21	FSM	ENSMUSG00000045659.19	ENSMUST00000182511.8	4502	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	61.3160664100365	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACGGATTGGCGTGGTTC	NA	False	NA	-4	True	AATAAA	-14	NA	115788839	115733029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115788711
ENSMUST00000182532.8	chr3	+	2059	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	163.233149894529	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGCACTGGCTGTGTC	NA	False	NA	39	True	AATAAA	-41	NA	68375515	68533814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_68375563_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUST00000182533.8	chr17	+	3122	21	FSM	ENSMUSG00000071054.13	ENSMUST00000182533.8	3122	21	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_18	119.307543768196	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATTTTTGTTCG	7977	False	NA	-40	True	NA	NA	NA	56891973	56913219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ENSMUST00000182539.8	chr17	+	1526	4	FSM	ENSMUSG00000034165.17	ENSMUST00000182539.8	931	4	0	-595	0	0	multi-exon	FALSE	canonical	3	145	junction_1	1891.51068373051	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47906992	47910614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47907141_47908344_47908505_47908927_47909065_47909533
ENSMUST00000182559.8	chr18	-	4265	19	FSM	ENSMUSG00000041225.17	ENSMUST00000182559.8	4265	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_11	38.5140666943045	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	NA	False	NA	-23	True	AATAAA	-14	NA	6136098	6025216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUST00000182578.2	chr7	-	3832	1	FSM	ENSMUSG00000074024.6	ENSMUST00000182578.2	3832	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATAAGCAGGGTATTTA	NA	False	NA	NA	False	AAAAAG	-15	NA	92390676	92386844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92386800_92390700
ENSMUST00000182588.5	chr3	-	2359	1	FSM	ENSMUSG00000032826.20	ENSMUST00000182588.5	2359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGCAGTGGTGGTTT	NA	False	NA	-7	True	AATAAA	-14	NA	126717621	126715262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_126715300_126717600
ENSMUST00000182593.8	chr1	-	9022	34	FSM	ENSMUSG00000040225.16	ENSMUST00000182593.8	9022	34	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_32	42.623622398965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCCCTCTTCCTGGATG	3489	False	NA	NA	False	AATAAA	-16	NA	162568050	162500457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ENSMUST00000182602.2	chr5	-	733	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	75.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTGGCCTTCTCAGTG	7355	False	NA	-33	True	AATAAA	-10	NA	139812598	139809367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139809829_139811882_139812120_139812563
ENSMUST00000182625.2	chr2	-	4453	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTCTTGGTGTTGTGTC	NA	False	NA	-3	True	NA	NA	NA	152239983	152235530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152235500_152240000
ENSMUST00000182642.8	chr1	+	2889	24	FSM	ENSMUSG00000025964.16	ENSMUST00000182642.8	2889	24	0	0	0	0	multi-exon	TRUE	canonical	2	25	junction_12	8.88489723439638	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACAGTTTCTTCTCTGCC	NA	False	NA	NA	False	AGTAAA	-17	NA	63485049	63612376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574293_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045
ENSMUST00000182659.8	chr9	-	3080	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	0	125	0	0	multi-exon	FALSE	canonical	3	262	junction_19	112.690456068333	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9705	False	NA	-2	True	AAGAAA	-16	NA	107648195	107617694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ENSMUST00000182706.8	chr2	-	2525	15	FSM	ENSMUSG00000002107.19	ENSMUST00000182706.8	2525	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	11.1513246216011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	7086053	6549651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6967189_6967226_7085917
ENSMUST00000182709.8	chr5	+	3046	8	FSM	ENSMUSG00000029110.14	ENSMUST00000182709.8	3046	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	927.964241042219	3200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATTTATTCAGTTAT	NA	False	NA	28	True	AATAAA	-18	NA	34493632	34510783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
ENSMUST00000182714.2	chr19	-	690	2	FSM	ENSMUSG00000042694.18	ENSMUST00000182714.2	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCCTGGGCTACATAAGA	NA	False	NA	NA	False	NA	NA	NA	47525485	47524353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47524811_47525252
ENSMUST00000182717.2	chr16	+	2202	6	FSM	ENSMUSG00000034206.16	ENSMUST00000182717.2	2202	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	2.75680975041804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGTTTTTAATTTTT	NA	False	NA	2	True	AATAAA	-15	NA	36906276	36915779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ENSMUST00000182719.8	chr3	+	2156	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	72.6321455791344	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTCCTTTTGCTCACTA	NA	False	NA	21	True	AATAAA	-23	NA	68401540	68533796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUST00000182732.2	chr14	+	4671	4	FSM	ENSMUSG00000021767.20	ENSMUST00000182732.2	4671	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	14.1970262926979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAATGATGAAAAAGG	NA	False	NA	NA	False	AAAACA	-40	NA	21672609	21684657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21676909_21678880_21678997_21681389_21681532_21684543
ENSMUST00000182742.2	chr1	-	400	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182742.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	223.143202649977	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014342	10012249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10012375_10012547_10012617_10012834_10012943_10014244
ENSMUST00000182746.2	chr7	-	2374	9	FSM	ENSMUSG00000058447.9	ENSMUST00000182746.2	2374	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	43.1955943934101	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCCACTGTGTCCCAG	9890	False	NA	NA	False	ATTAAA	-18	NA	29789835	29755458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29780515_29780643_29786524_29786585_29789712
ENSMUST00000182772.8	chr5	+	928	3	FSM	ENSMUSG00000029110.14	ENSMUST00000182772.8	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	2071	junction_1	95	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTATTCACAGCTTACA	NA	False	NA	NA	False	NA	NA	NA	34493767	34504770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34493886_34499865_34500024_34504118
ENSMUST00000182793.8	chr6	+	2459	20	FSM	ENSMUSG00000030314.17	ENSMUST00000182793.8	2459	20	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	42.1345950463867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTGGGGCTCAGGTCCT	NA	False	NA	3	True	NA	NA	NA	114620087	114836182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_114620112_114623897_114624019_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000182811.2	chr11	+	2153	1	FSM	ENSMUSG00000086859.5	ENSMUST00000182811.2	2153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTTTCCATTGTTCAA	894	False	NA	19	True	AATAAA	-15	NA	116967627	116969780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116967600_116969800
ENSMUST00000182818.3	chr3	-	2115	5	FSM	ENSMUSG00000033882.16	ENSMUST00000182818.3	2115	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGGAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	82773954	82745124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_82745767_82749780_82749841_82771211_82771995_82772511_82772980_82773792
ENSMUST00000182819.8	chr1	-	816	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	0	0	0	0	multi-exon	TRUE	canonical	3	538	junction_1	75	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGGGCAGTAATTTC	NA	False	NA	-13	True	AATAAA	-14	NA	10013448	10012247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10012381_10012547_10012617_10012834
ENSMUST00000182821.8	chr19	+	1443	3	FSM	ENSMUSG00000033760.18	ENSMUST00000182821.8	1443	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAGTTGTAAAAAGATAC	NA	False	NA	NA	False	AGTAAA	-11	NA	4806570	4812904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4806690_4807273_4807698_4812004
ENSMUST00000182827.8	chr17	+	640	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAATCTGAGATTGTC	NA	False	NA	NA	False	NA	NA	NA	21949775	21964042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUST00000182827.8-0	chr17	+	4611	6	FSM	ENSMUSG00000061544.14	ENSMUST00000182827.8	640	6	-63	-3908	-63	0	multi-exon	FALSE	canonical	3	170	junction_1	15.5254629560603	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGACTTGTATCATAGT	NA	False	NA	12	True	AATAAA	-26	NA	21949712	21967950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUST00000182834.8	chr7	-	5257	25	FSM	ENSMUSG00000045659.19	ENSMUST00000182834.8	5257	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	57.7912310726194	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTTGCTGGCTGTAT	9120	False	NA	2	True	ATTAAA	-21	NA	115837047	115722719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115836686
ENSMUST00000182877.8	chr19	-	2475	19	FSM	ENSMUSG00000025027.19	ENSMUST00000182877.8	2475	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	334.822419304825	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTTTGTCTGCCTCT	4728	False	NA	-2	True	AATAAA	-15	NA	53008727	52979612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53008416
ENSMUST00000182892.8	chr1	+	4207	3	FSM	ENSMUSG00000051285.18	ENSMUST00000182892.8	4207	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	AATATA	-25	NA	7230308	7242842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_7231288_7233471_7233596_7239738
ENSMUST00000182898.8	chr10	-	1852	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGAGTTGAAACTATT	NA	False	NA	2	True	AATAAA	-28	NA	59838957	59823230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUST00000182898.8-1	chr10	-	1329	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	24	499	0	0	multi-exon	FALSE	canonical	3	296	junction_3	30.5650490302604	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838933	59823729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUST00000182902.8	chr6	+	2543	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.8782759912583	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGCTCAGGTCCTTCC	NA	False	NA	6	True	NA	NA	NA	114620089	114836185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUST00000182912.2	chr10	-	1162	3	FSM	ENSMUSG00000020107.11	ENSMUST00000182912.2	566	3	-25	-571	0	0	multi-exon	FALSE	canonical	3	24	junction_2	171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCGCTGTGCGTATCCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	59838933	59823729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59824661_59826654_59826730_59838777
ENSMUST00000182917.2	chr9	-	1201	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTAAGTGCTATTACC	NA	False	NA	NA	False	NA	NA	NA	78729120	78727919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_78727900_78729100
ENSMUST00000182946.8	chr16	+	8628	31	FSM	ENSMUSG00000034206.16	ENSMUST00000182946.8	8628	31	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	7.47655595103045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATTTATGGGAATTTA	3748	False	NA	-18	True	AATATA	-16	NA	36832147	36915759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_36832422_36833468_36833649_36835440_36835572_36836674_36836771_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ENSMUST00000182948.8	chr5	-	1609	8	FSM	ENSMUSG00000029422.16	ENSMUST00000182948.8	1609	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	153.703663998392	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	NA	False	NA	-8	True	AATAAA	-13	NA	123880896	123866786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841
ENSMUST00000182955.8	chr5	-	1685	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_10	161.696753214157	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATTTTTTAGTTCATGA	4364	False	NA	NA	False	ATTAAA	-22	NA	123887434	123867029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUST00000182955.8-0	chr5	-	2267	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	-41	-541	0	0	multi-exon	FALSE	canonical	3	100	junction_10	161.696753214157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4323	False	NA	NA	False	AATAAA	-15	NA	123887475	123866488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUST00000182958.8	chr7	-	3444	18	FSM	ENSMUSG00000037519.18	ENSMUST00000182958.8	3444	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	54.4442192558643	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCCAGTTAAGAGTGCT	NA	False	NA	-10	True	AATAAA	-16	NA	144067011	144030502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038673_144038765_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982
ENSMUST00000182970.8	chr5	+	1205	6	FSM	ENSMUSG00000029110.14	ENSMUST00000182970.8	1205	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	963.179028010889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	34493671	34507871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255
ENSMUST00000182980.8	chr8	+	2080	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	59.2504008425259	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	5869	False	NA	7	True	AATAAA	-17	NA	70625057	70635500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUST00000182987.8-1	chr8	-	1149	9	FSM	ENSMUSG00000031586.18	ENSMUST00000182987.8	1385	9	-47	283	0	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTAAGAAATGTGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	34419891	34274091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUST00000183021.2	chr8	+	2323	1	FSM	ENSMUSG00000097944.2	ENSMUST00000183021.2	2323	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGGTTCATCCTGAATTC	NA	False	NA	NA	False	AATAAA	-19	NA	120828320	120830643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120828300_120830600
ENSMUST00000183032.8	chr9	-	3716	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_19	71.8828734817968	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7513	False	NA	NA	False	AATAAA	-18	NA	107750020	107650761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ENSMUST00000183037.3	chr10	+	735	6	FSM	ENSMUSG00000075706.12	ENSMUST00000183037.3	735	6	0	0	0	0	multi-exon	FALSE	canonical	3	7423	junction_4	813.086120899871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTCACCCTGGCTGCCT	1632	False	NA	-41	True	NA	NA	NA	79890298	79892228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUST00000183044.8	chr17	+	2064	7	FSM	ENSMUSG00000034165.17	ENSMUST00000183044.8	2064	7	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	1825.65854937031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	False	NA	NA	False	AATAAA	-9	NA	47816043	47910608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47816192_47889633_47889718_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUST00000183087.2	chr18	+	588	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	11.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAATGACTTTCTTAATAG	NA	False	NA	17	True	AATAAA	-17	NA	61772723	61780543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61772840_61778233_61778437_61780274
ENSMUST00000183090.2	chr7	+	399	1	FSM	ENSMUSG00000078087.6	ENSMUST00000183090.2	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATTTTGGCTGAAAAAA	NA	False	NA	NA	False	AAGAAA	-4	NA	55663763	55664162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_55663800_55664200
ENSMUST00000183096.8	chr7	-	7713	23	FSM	ENSMUSG00000030583.17	ENSMUST00000183096.8	7713	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	17.05054469453	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGCTGGTGTGTTCTCC	9138	False	NA	-7	True	AATAAA	-11	NA	29204885	29019802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29203275_29203337_29204714
ENSMUST00000183104.8	chr9	+	2477	12	FSM	ENSMUSG00000040875.13	ENSMUST00000183104.8	2477	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	15.4807264868928	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCGTTGGTATTTGTTG	NA	False	NA	6	True	ATTAAA	-16	NA	114807636	115061291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114938467_114938660_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
ENSMUST00000183107.2	chr8	+	2498	1	FSM	ENSMUSG00000031568.17	ENSMUST00000183107.2	2498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGCTCAA	NA	False	NA	NA	False	NA	NA	NA	48003492	48005990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_48003500_48006000
ENSMUST00000183108.8-1	chr19	-	2505	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	1573	0	0	0	multi-exon	FALSE	canonical	3	790	junction_19	199.189727395767	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5059	False	NA	-3	True	AATAAA	-14	NA	53027072	52979613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUST00000183146.2	chr12	+	1383	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCCTGGTGTGATCTTTC	NA	False	NA	10	True	AATAAA	-19	NA	84463969	84465352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84464000_84465400
ENSMUST00000183187.2	chr8	+	5485	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAATCCTCCTAAATT	NA	False	NA	NA	False	AATAAA	-8	NA	66964410	66970987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_66966353_66967444
ENSMUST00000183187.2-0	chr8	+	2731	2	FSM	ENSMUSG00000025519.6	ENSMUST00000183187.2	5485	2	-3	2757	0	1802	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTGTTTTTCATGAA	NA	False	NA	NA	False	CATAAA	-13	NA	66964407	66968230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_66966353_66967444
ENSMUST00000183196.2	chr19	-	435	1	FSM	ENSMUSG00000063754.8	ENSMUST00000183196.2	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACATCCCATGCACGG	9669	False	NA	NA	False	AATACA	-30	NA	28981242	28980807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_28980800_28981200
ENSMUST00000183200.8	chr7	+	1977	4	FSM	ENSMUSG00000078815.9	ENSMUST00000183200.8	1977	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	6.16441400296898	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472710	3484183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3473509_3478953_3479029_3480334_3480473_3483217
ENSMUST00000183211.8	chr15	-	2036	11	FSM	ENSMUSG00000098112.9	ENSMUST00000183211.8	2036	11	0	0	0	0	multi-exon	TRUE	canonical	2	83	junction_1	21.2593508837876	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGCCCTGAACAGCCA	NA	False	NA	1	True	AATAAA	-23	NA	100567434	100538957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100539446_100542693_100543421_100546960_100547044_100548080_100548157_100549839_100549926_100550265_100550374_100554075_100554172_100554590_100554686_100554940_100554996_100560397_100560479_100567293
ENSMUST00000183250.2	chr13	-	929	1	FSM	ENSMUSG00000098238.2	ENSMUST00000183250.2	929	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCTGGACCACCTACC	NA	False	NA	NA	False	NA	NA	NA	97595585	97594656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_97594700_97595600
ENSMUST00000183253.8	chr5	-	1980	3	FSM	ENSMUSG00000029422.16	ENSMUST00000183253.8	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	57.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4354	False	NA	NA	False	NA	NA	NA	123887444	123880011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123881742_123883017_123883175_123887351
ENSMUST00000183256.8	chr17	+	1793	4	FSM	ENSMUSG00000034165.17	ENSMUST00000183256.8	560	4	-256	-977	0	0	multi-exon	FALSE	canonical	1	42	junction_1	1940.06534826937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47906992	47910614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47907408_47908344_47908505_47908927_47909065_47909533
ENSMUST00000183277.8	chr12	-	4512	23	FSM	ENSMUSG00000034801.14	ENSMUST00000183277.8	4512	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	8.63397096042456	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGTCAAAATACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	69728615	69631626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69632407_69633382_69633493_69635473_69635516_69637468_69637731_69639705_69639823_69643417_69643591_69645549_69645668_69650249_69650413_69650558_69650679_69653963_69654187_69657496_69657601_69661409_69661533_69663056_69663139_69663627_69664284_69664829_69664958_69673990_69674090_69678833_69678945_69682355_69682500_69686827_69687035_69695225_69695391_69697373_69697506_69704726_69704853_69728288
ENSMUST00000183307.8	chr9	-	6321	23	FSM	ENSMUSG00000032580.13	ENSMUST00000183307.8	6321	23	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_22	95.559855328549	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTCTTTATTGAG	9720	False	NA	-1	True	AAGAAA	-17	NA	107648180	107617693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ENSMUST00000183309.8	chr10	-	1296	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	6557	False	NA	42	True	TTTAAA	-17	NA	40123032	40099422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ENSMUST00000183309.8-0	chr10	-	1212	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	9	75	0	-75	multi-exon	FALSE	canonical	3	1057	junction_7	76.0030863570847	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAACTTGTGTTTGGA	6566	False	NA	-7	True	TTTAAA	-3	NA	40123023	40099497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ENSMUST00000183310.2	chr4	-	1620	8	FSM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	6.73401357108153	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGCTTTTCCTCCTGAG	9747	False	NA	NA	False	NA	NA	NA	116982815	116977371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
ENSMUST00000183324.8	chr18	-	3227	8	FSM	ENSMUSG00000041258.19	ENSMUST00000183324.8	3227	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.983506020002	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGCATTAGGAAATGT	NA	False	NA	NA	False	CATAAA	-23	NA	82635875	82613600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82628729_82628812_82635834
ENSMUST00000183334.8	chr7	-	490	4	FSM	ENSMUSG00000051811.15	ENSMUST00000183334.8	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	338.542299999408	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATTTGTTTCTTTTCTC	NA	False	NA	-12	True	AATAAA	-14	NA	4756022	4754793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4754975_4755059_4755172_4755722_4755849_4755951
ENSMUST00000183361.3	chr17	+	117	1	FSM	ENSMUSG00000098269.3	ENSMUST00000183361.3	117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGCAGCTGTGGCAG	175	False	NA	NA	False	NA	NA	NA	35470264	35470381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_35470300_35470400
ENSMUST00000183362.2	chr9	+	581	2	FSM	ENSMUSG00000098894.2	ENSMUST00000183362.2	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCAGACTTGACAGTGA	NA	False	NA	NA	False	AATAAA	-22	NA	76226858	76228128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_76227020_76227708
ENSMUST00000183363.2	chr10	-	406	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	131	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGGGGGCTCAATGGC	NA	False	NA	0	True	AGTAAA	-20	NA	82459024	82455859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82456052_82458541_82458659_82458927
ENSMUST00000183372.8	chr9	+	1457	8	FSM	ENSMUSG00000037674.16	ENSMUST00000183372.8	1457	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	37.8380005512221	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTGATTACCTGGTTTT	1046	False	NA	9	True	AATAAA	-18	NA	72439890	72519705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
ENSMUST00000183404.8	chr9	-	4734	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	-24	1589	0	0	multi-exon	FALSE	canonical	3	53	junction_7	13.3626344707921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAACTAGTGAGTTT	9354	False	NA	-36	True	AATAAA	-21	NA	72019153	71751558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ENSMUST00000183410.8	chr9	+	4200	21	FSM	ENSMUSG00000038535.18	ENSMUST00000183410.8	4200	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_19	12.0883208097734	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTTATATTCAGATT	NA	False	NA	4	True	AATAAA	-13	NA	72182285	72271043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72182312_72202560_72202605_72203256_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72267567_72267624_72269215
ENSMUST00000183461.8	chr2	-	5090	17	FSM	ENSMUSG00000026933.18	ENSMUST00000183461.8	5090	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.9882794424807	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCAACCAGGACTCTG	NA	False	NA	NA	False	NA	NA	NA	25873294	25819737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25820038_25823602_25823722_25824231_25824348_25825473_25825574_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUST00000183463.8	chr3	-	3249	10	FSM	ENSMUSG00000037174.19	ENSMUST00000183463.8	3249	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	97.9455631120335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51233450	51162650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51201513_51201610_51215470_51215637_51230642_51230873_51233368
ENSMUST00000183468.2	chr9	+	1834	2	FSM	ENSMUSG00000038535.18	ENSMUST00000183468.2	1834	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTTTAATTCTTAAGAT	NA	False	NA	NA	False	NA	NA	NA	72267483	72270909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72267624_72269215
ENSMUST00000183478.2	chr8	+	538	1	FSM	ENSMUSG00000066362.6	ENSMUST00000183478.2	538	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCTCAGACACTAAAG	NA	False	NA	37	True	AATAAA	-26	NA	87774316	87774854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_87774300_87774900
ENSMUST00000183511.2	chr9	+	775	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGATGAAGAAGGAGAT	NA	False	NA	71	True	NA	NA	NA	81559664	81560439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_81559700_81560400
ENSMUST00000183607.2	chr1	+	1676	2	FSM	ENSMUSG00000098923.2	ENSMUST00000183607.2	681	2	0	-995	0	-759	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTGTGAAGATAT	NA	False	NA	33	True	NA	NA	NA	119453902	119455954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_119454278_119454653
ENSMUST00000183610.8	chr11	-	3006	15	FSM	ENSMUSG00000020717.20	ENSMUST00000183610.8	3006	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_12	484.073763142835	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	9556	False	NA	-10	True	AATAAA	-18	NA	106606088	106545043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106590417_106590712_106605727_106605755_106605844
ENSMUST00000183618.3	chr2	+	693	2	FSM	ENSMUSG00000098387.3	ENSMUST00000183618.3	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGATCAGGCGTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	144210915	144215641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_144211078_144215110
ENSMUST00000183663.8	chr13	+	8678	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_16	42.4389267065038	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATACGTGTTCTCCCAT	NA	False	NA	NA	False	TATAAA	-15	NA	112600603	112646620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUST00000183703.8	chr6	-	8760	21	FSM	ENSMUSG00000030172.16	ENSMUST00000183703.8	8760	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	46.7130602722622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCAGCCTTCTTGAG	NA	False	NA	NA	False	TATAAA	-16	NA	119825111	119547756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119711041_119711054_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119824837
ENSMUST00000183714.8	chr11	+	3651	21	FSM	ENSMUSG00000034940.16	ENSMUST00000183714.8	3651	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	19.49480700084	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGCTCAATGAAGCTG	1480	False	NA	NA	False	NA	NA	NA	83855301	83931754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ENSMUST00000183836.2	chr2	-	2131	5	FSM	ENSMUSG00000038605.12	ENSMUST00000183836.2	2131	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	19.6850196850295	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTCAGTGTTGGGTC	1043	False	NA	-5	True	AATAAA	-11	NA	181240991	181237013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239387_181240724
ENSMUST00000183846.8	chr7	-	4577	19	FSM	ENSMUSG00000050382.15	ENSMUST00000183846.8	4577	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	9.36634374031449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCTTACATCTTAAAT	NA	False	NA	0	True	AATAAA	-15	NA	79365468	79347845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
ENSMUST00000183867.7	chr6	+	439	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	0	5223	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACTGTTTCTGGGCTCTG	7965	False	NA	24	True	NA	NA	NA	134906054	134928538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134906224_134928268
ENSMUST00000183873.8	chr9	-	3121	14	FSM	ENSMUSG00000032352.17	ENSMUST00000183873.8	3121	14	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_5	6.66972316521396	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAGCTTTTTAAGAATT	NA	False	NA	NA	False	AATAAA	-17	NA	77452152	77338104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_77339563_77341275_77341413_77342328_77342502_77349458_77349575_77358639_77358724_77359884_77360004_77362439_77362585_77364671_77364747_77365112_77365177_77365352_77365410_77375839_77375930_77379433_77379513_77406515_77406634_77451746
ENSMUST00000183905.8	chr6	+	474	3	FSM	ENSMUSG00000098318.8	ENSMUST00000183905.8	474	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTTTCTGGGCTCTGTT	7971	False	NA	26	True	NA	NA	NA	134906060	134928540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_134906165_134920602_134920701_134928268
ENSMUST00000183918.8	chr9	-	4308	14	FSM	ENSMUSG00000032228.17	ENSMUST00000183918.8	4308	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	26.2527541525021	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGTGAGTTTTTTA	NA	False	NA	-32	True	AATAAA	-25	NA	71803678	71751554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71803211
ENSMUST00000183946.8	chr2	-	768	5	FSM	ENSMUSG00000044627.12	ENSMUST00000183946.8	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	3309	junction_1	124.51380445557	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTGATCCTTGTCT	NA	False	NA	-12	True	AATAAA	-14	NA	32178080	32168827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ENSMUST00000184015.2	chr9	+	1554	7	FSM	ENSMUSG00000037674.16	ENSMUST00000184015.2	1554	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	16.2933183305987	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTTGTTTTTGGTTGGT	1172	False	NA	72	True	AATAAA	-30	NA	72440016	72519768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902
ENSMUST00000184035.8	chr9	-	2268	13	FSM	ENSMUSG00000079469.11	ENSMUST00000184035.8	3221	13	0	953	0	0	multi-exon	FALSE	non_canonical	3	4	junction_1	16.6088580783468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAAAATCAAGTTGCTT	NA	False	NA	-11	True	AATAAA	-13	NA	72946981	72921945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_72922474_72923430_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ENSMUST00000184086.8	chr11	-	2512	6	FSM	ENSMUSG00000019590.17	ENSMUST00000184086.8	1130	6	0	-1382	0	0	multi-exon	FALSE	canonical	3	6	junction_2	71.4898594207598	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834965	105824527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_105826394_105826577_105826780_105827007_105827112_105827380_105827480_105828454_105828667_105834936
ENSMUST00000184105.9	chr2	+	1398	7	FSM	ENSMUSG00000037514.19	ENSMUST00000184105.9	1398	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACACCCCATCCCACCCCC	894	False	NA	NA	False	GATAAA	-20	NA	131104444	131138408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ENSMUST00000184105.9-0	chr2	+	4128	7	FSM	ENSMUSG00000037514.19_ENSMUSG00000086329.2	ENSMUST00000184105.9	1398	7	-30	-2700	0	0	multi-exon	FALSE	canonical	0	0	junction_2	197.100651106653	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	864	False	NA	5	True	AATAAA	-19	NA	131104414	131141108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131104736_131115830_131116041_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ENSMUST00000184113.8	chr3	-	3935	24	FSM	ENSMUSG00000027699.20	ENSMUST00000184113.8	3935	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_21	217.581751361459	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTTTTATGTGTCCTG	1838	False	NA	NA	False	AATAAA	-16	NA	27207999	27151374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201032_27203141_27203222_27204177_27204330_27207771
ENSMUST00000184125.8	chr9	-	2794	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAGTTTGCTATTTGTA	7736	False	NA	NA	False	NA	NA	NA	72399383	72367001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ENSMUST00000184125.8-0	chr9	-	1271	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	140	1383	0	0	multi-exon	FALSE	canonical	3	143	junction_11	31.4406169897191	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTGGTGAAATAAACAGA	7876	False	NA	-32	True	AATAAA	-14	NA	72399243	72368384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ENSMUST00000184126.3	chr9	+	496	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGTTATTTATAAAGGT	NA	False	NA	NA	False	AATAAA	-19	NA	72946999	72950061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72947148_72949713
ENSMUST00000184137.2	chr7	-	4093	19	FSM	ENSMUSG00000050382.15	ENSMUST00000184137.2	4093	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	12.416262732679	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATTCCAGTCCTGCTGAG	NA	False	NA	NA	False	NA	NA	NA	79365417	79348275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352028_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358169_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578_79363931_79365412
ENSMUST00000184139.8	chr2	+	2251	9	FSM	ENSMUSG00000048186.15	ENSMUST00000184139.8	2251	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.45506874027131	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATAATAATAACT	4443	False	NA	NA	False	AATAAA	-31	NA	4722641	4805374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_4723104_4725291_4725376_4749029_4749333_4754346_4754470_4757530_4757803_4767888_4768115_4793266_4793387_4801343_4801395_4804764
ENSMUST00000184143.8	chr7	-	435	4	FSM	ENSMUSG00000051811.15	ENSMUST00000184143.8	435	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	378.537830195198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4754975_4755106_4755161_4755722_4755849_4755951
ENSMUST00000184151.3	chr17	+	473	1	FSM	ENSMUSG00000100865.3	ENSMUST00000184151.3	473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	242	False	NA	NA	False	AATAAA	-15	NA	71182834	71183307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_71182800_71183300
ENSMUST00000184169.8	chr2	-	2392	17	FSM	ENSMUSG00000027010.17	ENSMUST00000184169.8	2392	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	42.1928237381667	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCAGTTTGTTTTCC	NA	False	NA	48	True	NA	NA	NA	71197877	71105033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71174233_71174377_71196870_71196925_71197856
ENSMUST00000184181.2	chr18	+	1865	1	FSM	ENSMUSG00000098702.2	ENSMUST00000184181.2	1865	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTTGGTCAGACTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	61859460	61861325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_61859500_61861300
ENSMUST00000184186.2	chr19	+	3755	1	FSM	ENSMUSG00000044345.10	ENSMUST00000184186.2	3755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTCTCTGACACCAGG	NA	False	NA	NA	False	NA	NA	NA	42136146	42139901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42136100_42139900
ENSMUST00000184205.8	chr4	+	1054	8	FSM	ENSMUSG00000028863.14	ENSMUST00000184205.8	1054	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	102.612805025016	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCATTCTCTTGTTT	NA	False	NA	-10	True	NA	NA	NA	124978956	125003507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001444_125001503_125002115_125002150_125003091
ENSMUST00000184297.8	chr17	-	2742	14	FSM	ENSMUSG00000024095.16	ENSMUST00000184297.8	2742	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	238.271661377061	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTCATCTTCATT	3570	False	NA	NA	False	TATAAA	-15	NA	80369656	80337265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80352368_80352452_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUST00000184339.2	chr4	+	488	2	FSM	ENSMUSG00000029066.13	ENSMUST00000184339.2	488	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGGAGCCCATCATGGTCT	NA	False	NA	NA	False	NA	NA	NA	155887334	155888099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_155887553_155887829
ENSMUST00000184450.8	chr9	+	3329	10	FSM	ENSMUSG00000032216.16	ENSMUST00000184450.8	3329	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	906.918361033807	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATTTGTGCCGTTAGTT	NA	False	NA	NA	False	AATAAA	-17	NA	72569763	72628072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499
ENSMUST00000184455.8	chr4	+	2478	9	FSM	ENSMUSG00000040410.15	ENSMUST00000184455.8	2478	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	22.7156333832011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCTTTGTTAAGAATC	-11	True	NA	NA	False	AATAAA	-41	NA	22357570	22434088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390713_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ENSMUST00000184458.8	chr15	-	5293	5	FSM	ENSMUSG00000038679.17	ENSMUST00000184458.8	5293	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.52299847737046	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGATCGAGAGAAAGA	NA	False	NA	46	True	NA	NA	NA	50753109	50521806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50752999
ENSMUST00000184485.8	chr15	-	2523	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184485.8	2523	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	8.85605736578731	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACACAAACAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	102533874	102442006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533473
ENSMUST00000184497.2	chr14	-	3602	3	FSM	ENSMUSG00000034248.8	ENSMUST00000184497.2	5927	3	0	2325	0	0	multi-exon	FALSE	canonical	3	50	junction_2	78	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGAATTTCTCTTTT	542	False	NA	-8	True	NA	NA	NA	69522561	69481624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_69482804_69485029_69487072_69522180
ENSMUST00000184535.8	chr2	-	1358	7	FSM	ENSMUSG00000027327.17	ENSMUST00000184535.8	1358	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	320.450724241133	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGAGGTTAGCGGGG	NA	False	NA	-14	True	AATAAA	-15	NA	131001954	130988243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130991360_130991463_130993537_130993681_130995513_130995631_131001872
ENSMUST00000184587.5	chr7	-	1033	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184587.5	5140	5	-128	4235	-128	0	multi-exon	FALSE	canonical	3	140	junction_4	46.3384289763906	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCAGTTTGGGCCTTTT	NA	False	NA	-6	True	AATAAA	-19	NA	73208271	73193783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_73194131_73199344_73199401_73205002_73205082_73205602_73205669_73207786
ENSMUST00000184616.8	chr15	-	7147	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_11	10.1696355688543	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTATGTTTGGTGCTTCC	NA	False	NA	-1	True	ATTAAA	-16	NA	102533885	102437070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533796
ENSMUST00000184618.2	chr16	+	3159	3	FSM	ENSMUSG00000022601.12	ENSMUST00000184618.2	3159	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGCGTTGAGCTTGAC	5155	False	NA	6	True	AATAAA	-27	NA	55825554	55829276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_55826432_55826537_55826714_55827170
ENSMUST00000184635.8	chr17	-	3009	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	159.429974178843	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTAAGGCTGTTGTTC	3570	False	NA	-4	True	NA	NA	NA	80369656	80336915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUST00000184642.2	chr14	-	3925	2	FSM	ENSMUSG00000055538.8	ENSMUST00000184642.2	3925	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCTCGTGAGTTTGTA	NA	False	NA	-3	True	ATTAAA	-16	NA	25720216	25712067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_25715827_25720050
ENSMUST00000184644.8	chr3	-	1681	8	FSM	ENSMUSG00000039795.15	ENSMUST00000184644.8	954	8	0	-727	0	0	multi-exon	FALSE	canonical	3	11	junction_7	262.492293375696	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10416377	10405014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416228
ENSMUST00000184655.4	chr7	-	602	3	FSM	ENSMUSG00000101970.9	ENSMUST00000184655.4	602	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	39	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAGAAAATACCCAAAT	NA	False	NA	NA	False	AATAAA	-33	NA	73208134	73204893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_73205082_73205602_73205669_73207786
ENSMUST00000184673.2	chr9	-	527	2	FSM	ENSMUSG00000098294.2	ENSMUST00000184673.2	527	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGCTGTCTCTCTTGTT	7538	False	NA	NA	False	NA	NA	NA	72683507	72681344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_72681693_72683328
ENSMUST00000184695.2	chr9	+	2078	1	FSM	ENSMUSG00000010051.16	ENSMUST00000184695.2	2078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	107456795	107458873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107456800_107458900
ENSMUST00000184746.2	chrX	+	735	5	FSM	ENSMUSG00000096788.9	ENSMUST00000184746.2	735	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	31.4523449046331	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCCAGACGATGTTTTC	NA	False	NA	NA	False	NA	NA	NA	36712126	36723375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36712216_36712377_36712790_36720942_36720989_36721255_36721305_36723236
ENSMUST00000184850.8	chr17	-	1072	3	FSM	ENSMUSG00000073406.11	ENSMUST00000184850.8	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_2	90.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTATGTTTCCTGCAT	NA	False	NA	-5	True	AATAAA	-22	NA	36392879	36391006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36391216_36391890_36392008_36392133
ENSMUST00000184862.8	chr2	+	1730	10	FSM	ENSMUSG00000039069.20	ENSMUST00000184862.8	1730	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	58.7703208880465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTCTGTGTCTTTA	NA	False	NA	NA	False	AATATA	-1	NA	179712384	179727695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
ENSMUST00000184866.10	chrX	+	893	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	2792	junction_1	493.533626007388	799	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTAGTGATTCGAGTAA	8505	False	NA	17	True	ATTAAA	-14	NA	36891635	36897308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ENSMUST00000184877.8	chr3	-	1575	4	FSM	ENSMUSG00000001018.16	ENSMUST00000184877.8	1575	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	310.762860643861	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTATTTTAT	NA	False	NA	-29	True	AATAAA	-20	NA	90398331	90395679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398143
ENSMUST00000184882.2	chr3	+	2311	13	FSM	ENSMUSG00000027936.19	ENSMUST00000184882.2	2311	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.1089573882348	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGTGCTTGGCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	90164601	90171427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90164719_90165771_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
ENSMUST00000184888.8	chr5	-	3892	18	FSM	ENSMUSG00000042508.17	ENSMUST00000184888.8	3892	18	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	65.4104951209844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGATTTTGAGCCATGC	NA	False	NA	-6	True	AATAAA	-19	NA	9211759	9168872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180653_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ENSMUST00000184889.2	chr17	-	4651	6	FSM	ENSMUSG00000024095.16	ENSMUST00000184889.2	4651	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	229.055975691533	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTGTGAAACCGTGTA	3662	False	NA	NA	False	TATAAA	-14	NA	80369564	80352477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUST00000184932.9	chr2	+	3622	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGTGTTTGCTTGCATG	937	False	NA	3	True	AATAAA	-17	NA	131104487	131141106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
ENSMUST00000184932.9-0	chr2	+	1200	5	FSM	ENSMUSG00000037514.19	ENSMUST00000184932.9	3622	5	-73	2495	0	0	multi-exon	FALSE	canonical	0	0	junction_2	240.508315864546	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	864	False	NA	13	True	NA	NA	NA	131104414	131138611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_131104736_131115830_131116041_131129393_131129518_131135318_131135445_131138192
ENSMUST00000184951.8	chr5	-	7735	23	FSM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	-18	-2709	0	0	multi-exon	FALSE	canonical	3	20	junction_21	8.45259019423842	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGGTATCTGTGAGC	NA	False	NA	-4	True	NA	NA	NA	124465933	124389021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ENSMUST00000184963.8	chr3	-	1616	11	FSM	ENSMUSG00000033439.13	ENSMUST00000184963.8	1616	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	31.2251501197352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCTGAGTGTGAGGCT	NA	False	NA	NA	False	AATAAA	-22	NA	116388485	116374742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_116375260_116376142_116376374_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUST00000184970.9	chr19	+	4042	20	FSM	ENSMUSG00000010097.16	ENSMUST00000184970.9	4042	20	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	65.017278760312	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTGTGTCCCATTACT	8603	False	NA	32	True	GATAAA	-11	NA	8734470	8748271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUST00000184973.8	chr14	+	3589	13	FSM	ENSMUSG00000095463.9	ENSMUST00000184973.8	3589	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	36.1504379872038	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGACGTCTTTCCCTTG	7301	False	NA	NA	False	NA	NA	NA	69574622	69604719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594599_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ENSMUST00000185005.2	chr3	-	1505	3	FSM	ENSMUSG00000001018.16	ENSMUST00000185005.2	1505	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	341	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTATTTTATTAT	NA	False	NA	-26	True	AATAAA	-23	NA	90398300	90395676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90396901_90397460_90397580_90398138
ENSMUST00000185006.9-1	chr14	-	1421	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	29	697	0	173	multi-exon	FALSE	canonical	3	137	junction_1	7.40870359029762	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACATGCATCTGAGTT	NA	False	NA	-5	True	AGTAAA	-18	NA	25928067	25924420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
ENSMUST00000185034.8	chr4	-	584	4	FSM	ENSMUSG00000014592.22	ENSMUST00000185034.8	2198	4	-42	1656	0	0	multi-exon	FALSE	canonical	3	969	junction_2	33.2565782966318	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTCATCTTTTTAAAA	NA	False	NA	-23	True	AATAAA	-10	NA	151946203	151876686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_151876960_151914874_151914994_151920270_151920341_151946081
ENSMUST00000185036.2	chr4	-	1223	3	FSM	ENSMUSG00000078570.11	ENSMUST00000185036.2	1223	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	68	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGACTGACCTTTCTT	7189	False	NA	-7	True	ATTAAA	-16	NA	124744989	124743282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_124743756_124744024_124744227_124744441
ENSMUST00000185072.8	chr14	+	3589	13	FSM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	35.9663229826026	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGACGTCTTTCCCTTG	NA	False	NA	NA	False	NA	NA	NA	69792872	69822969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812849_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ENSMUST00000185117.8	chr9	-	3986	20	FSM	ENSMUSG00000032228.17	ENSMUST00000185117.8	3986	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	24.8232533286267	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATCTTGTAAGAAAATT	9574	False	NA	NA	False	AAGAAA	-43	NA	72018933	71752004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018107_72018857
ENSMUST00000185167.8	chr17	-	836	5	FSM	ENSMUSG00000073406.11	ENSMUST00000185167.8	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	210.516626421763	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGTTGATTAGTGGAG	NA	False	NA	-79	True	NA	NA	NA	36395115	36391080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394832_36395051
ENSMUST00000185168.8	chr10	-	469	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	174.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTCATAACCATCTATG	NA	False	NA	84	True	NA	NA	NA	82459062	82455775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82456052_82458541_82458659_82458986
ENSMUST00000185168.8-0	chr10	-	353	3	FSM	ENSMUSG00000063320.12	ENSMUST00000185168.8	469	3	32	84	0	0	multi-exon	FALSE	canonical	3	100	junction_2	174.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGGGGGCTCAATGGC	NA	False	NA	0	True	AGTAAA	-20	NA	82459030	82455859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_82456052_82458541_82458659_82458986
ENSMUST00000185299.2	chr1	-	724	3	FSM	ENSMUSG00000040124.6	ENSMUST00000185299.2	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	13.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAATGGTTGGCCTCAG	NA	False	NA	NA	False	NA	NA	NA	163231180	163221984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_163222262_163224380_163224739_163231091
ENSMUST00000185317.7	chr1	+	1044	7	FSM	ENSMUSG00000025949.17	ENSMUST00000185317.7	1044	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	20.9257948209593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTTTATTTATGTC	NA	False	NA	NA	False	AATAAA	-13	NA	65225841	65244865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
ENSMUST00000185331.7	chr1	-	5529	27	FSM	ENSMUSG00000055322.17	ENSMUST00000185331.7	5529	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	24.9060067372839	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTCTCTGGAGGTAAG	2598	False	NA	NA	False	AAGAAA	-11	NA	74034531	73953275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959756_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73975490_73975515_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359
ENSMUST00000185334.7	chr9	-	1109	7	FSM	ENSMUSG00000042210.18	ENSMUST00000185334.7	1109	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.104837682731	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTATTTCATTTCAC	NA	False	NA	-58	True	NA	NA	NA	106324642	106317308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322856_106322969_106323029_106324587
ENSMUST00000185343.7	chr14	+	3846	38	FSM	ENSMUSG00000021843.18	ENSMUST00000185343.7	3846	38	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_22	143.931000634869	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTAGTTTTATAATA	2384	False	NA	108	True	AAAAAG	-20	NA	47901243	47973748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUST00000185351.2	chr7	-	2432	1	FSM	ENSMUSG00000101225.2	ENSMUST00000185351.2	2432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTCCTA	10001	False	NA	NA	False	AATAAA	-35	NA	127112041	127109609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127109600_127112000
ENSMUST00000185355.7	chr19	-	2088	11	FSM	ENSMUSG00000025223.16	ENSMUST00000185355.7	2088	11	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	132.738992010637	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGTAAATTAAAAAAA	6721	False	NA	-53	True	TTTAAA	-15	NA	46033650	46021054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
ENSMUST00000185356.7	chr1	-	4916	23	FSM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_14	15.8534090501821	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	False	NA	-1	True	AATAAA	-19	NA	153061793	152998501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ENSMUST00000185362.7	chr1	+	3337	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATCCTTATCGTCAG	NA	False	NA	NA	False	NA	NA	NA	143615294	143625139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ENSMUST00000185362.7-0	chr1	+	659	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	53	2625	0	0	multi-exon	FALSE	canonical	3	459	junction_1	59.84981202978	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGATTGGCCAGTTTT	NA	False	NA	31	True	AATAAA	-18	NA	143615347	143622514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ENSMUST00000185374.2	chr9	-	3292	14	FSM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	91.6426685459609	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGATTTATTAAAGCCT	2481	False	NA	NA	False	AATGAA	-15	NA	86569330	86463458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86569010
ENSMUST00000185384.7	chr3	-	435	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	0	0	0	0	multi-exon	FALSE	canonical	3	4849	junction_3	245.494512271773	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTAAATCTTGTTAAT	NA	False	NA	0	True	AATAAA	-23	NA	14676345	14671343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
ENSMUST00000185398.7	chr1	-	7020	11	FSM	ENSMUSG00000054387.14	ENSMUST00000185398.7	2010	11	-3	-5007	0	0	multi-exon	FALSE	canonical	3	61	junction_6	121.196699625031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953095	132913957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ENSMUST00000185401.7	chr7	+	2904	8	FSM	ENSMUSG00000053877.13	ENSMUST00000185401.7	2904	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	6.55588223176215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTTATGCTCT	NA	False	NA	NA	False	TTTAAA	-18	NA	127111154	127126212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802
ENSMUST00000185414.2	chr6	-	1042	1	FSM	ENSMUSG00000100164.2	ENSMUST00000185414.2	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTATTTTTCCACCAGC	NA	False	NA	NA	False	AATACA	-24	NA	86826422	86825380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86825400_86826400
ENSMUST00000185418.2	chr1	-	496	5	FSM	ENSMUSG00000054387.14	ENSMUST00000185418.2	496	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	59.7620280780363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGGAAGCAAATAATGG	NA	False	NA	NA	False	NA	NA	NA	132953068	132936834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ENSMUST00000185469.7	chr1	-	4953	7	FSM	ENSMUSG00000037503.13	ENSMUST00000185469.7	778	7	-49	-4126	0	0	multi-exon	TRUE	canonical	3	22	junction_4	165.108802511152	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882115	34852306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859045_34867847_34867929_34875813_34875895_34881908
ENSMUST00000185481.7	chr7	+	2068	7	FSM	ENSMUSG00000045411.17	ENSMUST00000185481.7	759	7	33	-1342	0	0	multi-exon	FALSE	canonical	3	30	junction_1	300.418411922808	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896233_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000185483.7	chr1	+	3316	9	FSM	ENSMUSG00000043015.16	ENSMUST00000185483.7	2023	9	-10	-1283	0	0	multi-exon	FALSE	canonical	3	20	junction_5	9.4794184948234	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669895	52691078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682326_52682396_52684419_52684646_52687908_52688086_52688864
ENSMUST00000185488.7	chr19	+	716	5	FSM	ENSMUSG00000071653.10	ENSMUST00000185488.7	500	5	-16	-200	0	0	multi-exon	FALSE	canonical	3	137	junction_2	1592.05511839258	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGAAGTGCAGCAGGG	NA	False	NA	32	True	AATAAA	-21	NA	8866262	8868110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8866329_8866487_8866613_8867000_8867092_8867366_8867465_8867774
ENSMUST00000185492.7	chrX	+	673	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	17	656	0	0	multi-exon	FALSE	canonical	3	65	junction_2	49	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATGTCCAAATAAATTT	NA	False	NA	9	True	ATTAAA	-14	NA	152506622	152524260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_152506934_152508700_152508838_152524035
ENSMUST00000185519.7	chr9	-	1103	2	FSM	ENSMUSG00000079427.11	ENSMUST00000185519.7	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	1193	False	NA	NA	False	AATAAA	-16	NA	88598263	88570658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88571039_88597540
ENSMUST00000185521.2	chr1	-	1313	1	FSM	ENSMUSG00000048874.16	ENSMUST00000185521.2	1313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGAATGGCTATTTTTC	6093	False	NA	-12	True	AATAAA	-13	NA	30869824	30868511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30868500_30869800
ENSMUST00000185524.7	chr9	-	2820	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTATGTGTGTGATA	NA	False	NA	-1	True	AATAAA	-28	NA	99450702	99400856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUST00000185524.7-0	chr9	-	1663	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	-18	1175	0	-1175	multi-exon	FALSE	canonical	3	193	junction_11	21.8011297000487	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	NA	False	NA	-2	True	AATAAA	-17	NA	99450720	99402031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUST00000185528.2	chr9	-	1771	1	FSM	ENSMUSG00000032403.9	ENSMUST00000185528.2	1771	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63306528	63304757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_63304800_63306500
ENSMUST00000185559.2	chr9	+	2475	2	FSM	ENSMUSG00000035274.14	ENSMUST00000185559.2	409	2	0	-2066	0	-1049	multi-exon	FALSE	canonical	3	15	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGTTTAACTTTG	NA	False	NA	3	True	AATAAA	-16	NA	85725413	85728044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_85725548_85725703
ENSMUST00000185560.2	chr1	-	1749	8	FSM	ENSMUSG00000026347.14	ENSMUST00000185560.2	3488	8	1739	0	212	0	multi-exon	FALSE	canonical	2	4	junction_7	2.65729646253404	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCGAATCTGCATATCTC	NA	False	NA	NA	False	AATAAA	-15	NA	127605546	127418634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_127419398_127423454_127423597_127427920_127428033_127447081_127447179_127479062_127479155_127480497_127480542_127596387_127596508_127605167
ENSMUST00000185566.7	chr9	+	1054	3	FSM	ENSMUSG00000032417.11	ENSMUST00000185566.7	1054	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	7	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCTGGGTGAAAAACC	NA	False	NA	NA	False	AATAAA	-18	NA	86454043	86456786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_86454111_86454889_86455117_86456026
ENSMUST00000185587.2	chr1	-	1452	1	FSM	ENSMUSG00000100750.2	ENSMUST00000185587.2	1452	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAAAAAGGGGGAGA	NA	False	NA	NA	False	NA	NA	NA	62575101	62573649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_62573600_62575100
ENSMUST00000185614.2	chr1	-	2177	2	FSM	ENSMUSG00000010453.13	ENSMUST00000185614.2	2177	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAACTTTAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36408238	36404991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36407116_36408185
ENSMUST00000185644.7	chr9	+	2646	14	FSM	ENSMUSG00000032411.16	ENSMUST00000185644.7	2646	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	147.555024337027	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078400	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_96078614_96084183_96084242_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUST00000185645.2	chr9	-	353	2	FSM	ENSMUSG00000040813.17	ENSMUST00000185645.2	353	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCTTCCCATCCCCTG	7892	False	NA	NA	False	NA	NA	NA	106563102	106562127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106562195_106562816
ENSMUST00000185661.2	chr11	-	3125	1	FSM	ENSMUSG00000049755.15	ENSMUST00000185661.2	3125	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	58221165	58218040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58218000_58221200
ENSMUST00000185675.7	chr9	-	4850	5	FSM	ENSMUSG00000032252.15	ENSMUST00000185675.7	4850	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	11.5974135047432	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	62029892	61964529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62029766
ENSMUST00000185742.2	chr1	+	478	2	FSM	ENSMUSG00000018189.13	ENSMUST00000185742.2	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	1337	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCAGCCCTCAGCACA	NA	False	NA	NA	False	NA	NA	NA	143653013	143659980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143653215_143659703
ENSMUST00000185752.2	chr1	-	1901	9	FSM	ENSMUSG00000003051.14	ENSMUST00000185752.2	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_7	94.095363860288	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTGAGCTCTCTGT	NA	False	NA	-10	True	AATAAA	-23	NA	135186176	135181316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
ENSMUST00000185767.7	chr13	+	1279	3	FSM	ENSMUSG00000052293.15	ENSMUST00000185767.7	778	3	42	-543	0	-1	multi-exon	FALSE	canonical	3	39	junction_1	620	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGTACTTTGGCAG	NA	False	NA	NA	False	AATAAA	-19	NA	100788133	100792566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_100788295_100790698_100790792_100791541
ENSMUST00000185785.2	chr1	-	661	3	FSM	ENSMUSG00000026234.13	ENSMUST00000185785.2	661	3	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_2	2803.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGCTAAGAAAAACATTAC	NA	False	NA	NA	False	AAAAAG	-13	NA	86286691	86285033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_86285175_86285828_86285946_86286288
ENSMUST00000185800.7	chr10	+	3142	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	2858	False	NA	9	True	AATAAA	-17	NA	20188282	20216009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUST00000185800.7-0	chr10	+	5445	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	-65	-2238	0	0	multi-exon	FALSE	canonical	3	221	junction_3	210.967743716638	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2793	False	NA	16	True	AATAAA	-17	NA	20188217	20218247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUST00000185806.3	chr1	-	1270	1	FSM	ENSMUSG00000101795.3	ENSMUST00000185806.3	1270	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCATTAAAAATTGTTAAA	NA	False	NA	NA	False	AAGAAA	-17	NA	143022354	143021084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_143021100_143022400
ENSMUST00000185852.7	chr13	-	3946	24	FSM	ENSMUSG00000014850.16	ENSMUST00000185852.7	3946	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	25.3850498550558	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTATTGTATTTTGTT	NA	False	NA	NA	False	AATAAA	-28	NA	92491503	92348379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481610_92483240_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ENSMUST00000185912.7	chr1	-	4527	21	FSM	ENSMUSG00000010453.13	ENSMUST00000185912.7	4527	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	57.849459807331	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408238	36374810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404726_36406830_36406993_36408185
ENSMUST00000185928.2	chr15	-	614	2	FSM	ENSMUSG00000060036.15	ENSMUST00000185928.2	614	2	0	0	0	0	multi-exon	FALSE	canonical	3	16287	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCTTGCAAAGTAAGTG	3587	False	NA	NA	False	NA	NA	NA	79967538	79966183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79966784_79967524
ENSMUST00000185929.2	chr7	-	3817	27	FSM	ENSMUSG00000032737.14	ENSMUST00000185929.2	3817	27	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_26	33.9292031795969	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCACCCCGCATCCG	NA	False	NA	NA	False	NA	NA	NA	101486991	101473150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486871
ENSMUST00000185940.7	chr14	+	3869	38	FSM	ENSMUSG00000021843.18	ENSMUST00000185940.7	3869	38	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_37	185.49749899377	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTAGTTTTATAATA	2384	False	NA	108	True	AAAAAG	-20	NA	47901243	47973748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ENSMUST00000185949.2	chr9	-	2673	5	FSM	ENSMUSG00000074829.11	ENSMUST00000185949.2	634	5	0	-2039	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	8.44097150806707	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTATTATCATGTTTTG	NA	False	NA	NA	False	AATAAA	-23	NA	124075301	124054433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124074305_124074381_124075189
ENSMUST00000185985.7	chr7	-	3722	18	FSM	ENSMUSG00000001248.16	ENSMUST00000185985.7	3722	18	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_17	34.4459860006517	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5756	False	NA	-1	True	AATAAA	-15	NA	30850437	30829551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
ENSMUST00000186017.7	chr1	-	4021	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	0	1237	0	0	multi-exon	FALSE	canonical	3	136	junction_1	7.19739321808962	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGTATCTATCAGGTC	NA	False	NA	-12	True	AATAAA	-16	NA	138547487	138411849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ENSMUST00000186033.7	chr13	-	4147	30	FSM	ENSMUSG00000042590.18	ENSMUST00000186033.7	4147	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	175.633184386631	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107061658	106930946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106994006_106994034_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520
ENSMUST00000186044.2	chr1	+	725	2	FSM	ENSMUSG00000026020.10	ENSMUST00000186044.2	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	2172	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAATGCTGGGATTAAAG	NA	False	NA	NA	False	NA	NA	NA	59724164	59730148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_59724386_59729644
ENSMUST00000186049.2	chr9	-	2761	11	FSM	ENSMUSG00000032468.12	ENSMUST00000186049.2	2761	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	66.7805360864975	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTATGTGTGTGATA	NA	False	NA	-1	True	AATAAA	-28	NA	99450720	99400856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
ENSMUST00000186129.7	chr1	-	7797	44	FSM	ENSMUSG00000026193.16	ENSMUST00000186129.7	7797	44	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_13	520.876343765833	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGGACGTCATTTC	NA	False	NA	-10	True	AATAAA	-14	NA	71692359	71624682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUST00000186182.2	chr7	-	1512	7	FSM	ENSMUSG00000030591.18	ENSMUST00000186182.2	1512	7	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_5	143.933626678719	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAGTGTATCCAGTCTG	NA	False	NA	-10	True	AATAAA	-15	NA	28880098	28873612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUST00000186197.3	chr10	+	914	1	FSM	ENSMUSG00000094314.4	ENSMUST00000186197.3	914	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGGACCCAGAGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	100171537	100172451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_100171500_100172500
ENSMUST00000186207.7	chr7	+	3178	11	FSM	ENSMUSG00000030811.15	ENSMUST00000186207.7	3178	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	33.9100280153231	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTCCAGTTTGGCTCTT	9642	False	NA	3	True	NA	NA	NA	127344372	127368099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127344505_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ENSMUST00000186213.7	chr1	-	1462	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	51	1327	0	57	multi-exon	FALSE	canonical	3	248	junction_2	27.6526068692749	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTCTTGTCCCCTTTGT	NA	False	NA	-20	True	AATAAA	-14	NA	75195887	75192198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
ENSMUST00000186219.7	chr5	-	2904	5	FSM	ENSMUSG00000072774.11	ENSMUST00000186219.7	2904	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	90.557647385519	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGGAATTGTGCGTT	NA	False	NA	-9	True	NA	NA	NA	105007936	104961034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
ENSMUST00000186239.7	chr10	-	2255	12	FSM	ENSMUSG00000019813.17	ENSMUST00000186239.7	2255	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	75.4430440303278	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	384	False	NA	4	True	AATAAA	-25	NA	41685609	41594836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41657479_41657547_41685568
ENSMUST00000186245.7	chr7	+	1926	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_4	23.6388110621019	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTTCAGCCTGGGCTA	NA	False	NA	NA	False	NA	NA	NA	35285674	35308539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
ENSMUST00000186255.7	chr1	+	1119	4	FSM	ENSMUSG00000026238.15	ENSMUST00000186255.7	768	4	-10	-341	0	0	multi-exon	FALSE	canonical	3	33	junction_2	10628.523175347	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_86454673_86456894_86456967_86457452_86457527_86457686
ENSMUST00000186280.2	chr1	+	405	3	FSM	ENSMUSG00000041684.12	ENSMUST00000186280.2	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	18	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGGCTTCTTCCTAGGA	NA	False	NA	NA	False	TTTAAA	-7	NA	44158667	44165507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_44158890_44159333_44159435_44165425
ENSMUST00000186302.7	chr1	+	2352	13	FSM	ENSMUSG00000026159.14	ENSMUST00000186302.7	2352	13	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTGTTTTTGTGTTCTTG	NA	False	NA	15	True	AATAAA	-15	NA	82817394	82873396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ENSMUST00000186302.7-0	chr1	+	3286	13	FSM	ENSMUSG00000026159.14_ENSMUSG00002074851.1	ENSMUST00000186302.7	2352	13	-228	-706	0	0	multi-exon	FALSE	canonical	3	369	junction_12	56.7364154078607	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817166	82874102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
ENSMUST00000186303.7	chr13	-	3886	7	FSM	ENSMUSG00000100235.9	ENSMUST00000186303.7	3886	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.63964143856288	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	False	NA	1	True	AATAAA	-20	NA	67256613	67217462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67245856_67247112_67250106_67250200_67250761_67250846_67256512
ENSMUST00000186358.6	chr17	-	1455	3	FSM	ENSMUSG00000047407.18	ENSMUST00000186358.6	1455	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	139.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAATGAAGAGCATTTTC	NA	False	NA	78	True	AATAAA	-20	NA	71158064	71151205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71152236_71153166_71153394_71157866
ENSMUST00000186375.8	chr16	+	2350	7	FSM	ENSMUSG00000005982.15	ENSMUST00000186375.8	2350	7	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_5	41.1774614726713	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702546	3722634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3721329
ENSMUST00000186380.7	chr1	-	4561	28	FSM	ENSMUSG00000042699.12	ENSMUST00000186380.7	4561	28	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_24	37.4089841985242	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGTCATTGATGTTCT	NA	False	NA	-1	True	AATAAA	-18	NA	153363354	153331503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153332500_153333276_153333478_153333798_153333915_153334005_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347971_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354725_153356877_153356996_153358487_153358629_153359485_153359619_153363278
ENSMUST00000186431.7	chr17	+	526	4	FSM	ENSMUSG00000072761.11	ENSMUST00000186431.7	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	17.5689119374726	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAACCTTTTCATTTCAC	NA	False	NA	NA	False	NA	NA	NA	17514704	17538366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17514852_17536339_17536467_17536705_17536767_17538175
ENSMUST00000186465.7	chr1	-	9590	41	FSM	ENSMUSG00000026219.15	ENSMUST00000186465.7	9590	41	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_40	239.212613327558	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTACTTTATGTACA	6682	False	NA	-8	True	AATAAA	-22	NA	84818237	84698909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84818203
ENSMUST00000186475.2	chr7	+	2614	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	3.53553390593274	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAAGTTTCATAATTTTC	NA	False	NA	27	True	AATAAA	-24	NA	29607941	29616232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
ENSMUST00000186480.2	chr16	-	1350	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTTTCCTTGTAATGCC	3975	False	NA	NA	False	ATTAAA	-24	NA	55794980	55793630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55793600_55795000
ENSMUST00000186485.7	chr1	-	6759	31	FSM	ENSMUSG00000056536.15	ENSMUST00000186485.7	6759	31	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	10.8119789534057	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCTTGTGATAAGA	NA	False	NA	-5	True	AATAAA	-15	NA	105591387	105446150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ENSMUST00000186501.2	chr7	+	2019	4	FSM	ENSMUSG00000049643.16	ENSMUST00000186501.2	340	4	0	-1679	0	0	multi-exon	FALSE	canonical	3	27	junction_1	145.525102836437	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	7134	False	NA	NA	False	AATAAA	-20	NA	27273891	27281524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27273927_27274015_27274166_27278137_27278209_27279761
ENSMUST00000186528.7	chr1	-	962	7	FSM	ENSMUSG00000025917.10	ENSMUST00000186528.7	962	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	326.084557881677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGAAGCCCAACTGGGACG	NA	False	NA	NA	False	NA	NA	NA	10108166	10097422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107886
ENSMUST00000186531.2	chr8	+	2137	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTTTTACCTGCTGCT	NA	False	NA	9	True	NA	NA	NA	123769204	123771341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123769200_123771300
ENSMUST00000186543.7	chr1	-	3533	22	FSM	ENSMUSG00000026425.16	ENSMUST00000186543.7	3533	22	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	23.367225143015	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGCCAGATCTCTTG	NA	False	NA	0	True	AATAAA	-26	NA	131455085	131222955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_131223278_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ENSMUST00000186574.7	chr1	+	2834	23	FSM	ENSMUSG00000026104.15	ENSMUST00000186574.7	2834	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	6.78598458418965	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATGAGTGGGAAAGCAG	3248	False	NA	NA	False	AATAAA	-16	NA	52158598	52194571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144
ENSMUST00000186619.7	chr8	-	2337	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	18.4451137763426	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGCAGAAGATCATGTG	NA	False	NA	NA	False	NA	NA	NA	129960499	129944597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
ENSMUST00000186627.7	chr14	+	3840	38	FSM	ENSMUSG00000021843.18	ENSMUST00000186627.7	3840	38	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_34	182.366270284882	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAGTTTAGTTTTATA	2384	False	NA	105	True	AAAAAG	-17	NA	47901243	47973745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ENSMUST00000186634.7	chr7	-	2735	19	FSM	ENSMUSG00000001248.16	ENSMUST00000186634.7	2735	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	68.1079390234699	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCTTGTACCTGTGGGG	5735	False	NA	-1	True	AATAAA	-15	NA	30850458	30829551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30834950_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
ENSMUST00000186648.7	chr1	-	6442	41	FSM	ENSMUSG00000026219.15	ENSMUST00000186648.7	6442	41	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_36	283.885734055095	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7910	False	NA	17	True	NA	NA	NA	84817009	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755211_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
ENSMUST00000186659.7	chr2	+	2915	19	FSM	ENSMUSG00000027263.13	ENSMUST00000138601.8	2915	19	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_18	57.833947056195	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTGGCCTTGTAGAACT	NA	False	NA	2	True	AATAAA	-14	NA	121001689	121029250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ENSMUST00000186694.7	chr1	-	5385	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	7.4512187699077	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACTGGTTTCCACAGA	9974	False	NA	41	True	AATAAA	-13	NA	43131889	43086379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
ENSMUST00000186723.3	chr7	-	762	6	FSM	ENSMUSG00000001248.16	ENSMUST00000186723.3	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	114.660542472116	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACAGTGAGTCGAGCCGC	872	False	NA	NA	False	NA	NA	NA	30855321	30841981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30854291_30854572_30855260
ENSMUST00000186730.7	chr1	-	4674	22	FSM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_21	11.573681928353	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGGTGTCAGTTTCTT	NA	False	NA	-1	True	AATAAA	-23	NA	134255004	134224521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995
ENSMUST00000186733.7	chr1	-	7141	16	FSM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-340	766	0	441	multi-exon	FALSE	canonical	3	122	junction_14	21.375375240371	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30913002	30842185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30912658
ENSMUST00000186745.2	chr1	+	3315	15	FSM	ENSMUSG00000023150.15	ENSMUST00000186745.2	3315	15	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	304.179802157895	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATTTAAGAACCCCAAAC	NA	False	NA	NA	False	NA	NA	NA	151220328	151239116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUST00000186761.2	chr14	+	3902	39	FSM	ENSMUSG00000021843.18	ENSMUST00000186761.2	3902	39	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_34	143.824040308417	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTTAGTTTTATAATAAA	2384	False	NA	NA	False	AAAAAG	-22	NA	47901243	47973750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUST00000186764.7	chr1	-	3640	9	FSM	ENSMUSG00000002881.15	ENSMUST00000186764.7	3640	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.8571321256829	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCTTAGAGTGCTTTG	NA	False	NA	0	True	AATAAA	-21	NA	52539459	52496452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_52498466_52501246_52501364_52503943_52504104_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539008_52539157_52539368
ENSMUST00000186785.7	chr1	-	1964	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAGAAAAAATATAA	NA	False	NA	NA	False	AATAAA	-5	NA	153283536	153280572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153282348_153283347
ENSMUST00000186785.7-0	chr1	-	544	2	FSM	ENSMUSG00000073538.11	ENSMUST00000186785.7	1964	2	0	1420	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGGGGTGTGGCCTGC	NA	False	NA	NA	False	NA	NA	NA	153283536	153281992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_153282348_153283347
ENSMUST00000186786.2	chr1	+	1236	1	FSM	ENSMUSG00000084799.8	ENSMUST00000186786.2	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATACAGCTGTTTATTTTT	NA	False	NA	NA	False	AGTAAA	-25	NA	63153254	63154490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_63153300_63154500
ENSMUST00000186788.7	chr9	-	6747	56	FSM	ENSMUSG00000032560.15	ENSMUST00000186788.7	6747	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_36	50.1970200952834	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTCAGACAGTAAATGC	NA	False	NA	NA	False	NA	NA	NA	104124026	104029515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104087067_104087083_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958
ENSMUST00000186794.7	chr1	-	1533	14	FSM	ENSMUSG00000038079.15	ENSMUST00000186794.7	1533	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	88.8684953594671	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAAGCAGGTGATC	3764	False	NA	NA	False	NA	NA	NA	59159541	59140069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59156000_59156064_59156489_59156501_59157133_59157166_59159476
ENSMUST00000186863.7	chr9	-	725	4	FSM	ENSMUSG00000079427.11	ENSMUST00000186863.7	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	219.136182924378	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTTGTCAAAATGAATCA	NA	False	NA	NA	False	NA	NA	NA	88601640	88570744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88571039_88597540_88597803_88598546_88598617_88601541
ENSMUST00000186864.7	chr10	+	2015	6	FSM	ENSMUSG00000035504.17	ENSMUST00000186864.7	2015	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	273.806939283868	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGTCCGCTAAGCT	7219	False	NA	17	True	AATAAA	-18	NA	80165978	80172274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170546_80170628_80170943
ENSMUST00000186870.7	chr3	-	1174	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	4849	junction_2	211	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTCTTTAAATCTTG	NA	False	NA	-5	True	AATAAA	-18	NA	14676321	14671348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_14672354_14674600_14674718_14676269
ENSMUST00000186913.2	chr11	+	401	2	FSM	ENSMUSG00000078572.4	ENSMUST00000186913.2	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATAAGGAACTGGTCTCTC	NA	False	NA	6	True	TATAAA	-6	NA	119989924	119991240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_119990085_119990999
ENSMUST00000186915.2	chr1	-	2090	5	FSM	ENSMUSG00000003721.15	ENSMUST00000186915.2	674	5	-74	-1342	0	0	multi-exon	FALSE	canonical	3	11	junction_4	81.0524521529115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255522	121232081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121255419
ENSMUST00000186948.7	chr1	-	641	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGTTGAAATTTGTTT	NA	False	NA	-82	True	NA	NA	NA	16727242	16713365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
ENSMUST00000186948.7-0	chr1	-	546	4	FSM	ENSMUSG00000079658.10	ENSMUST00000186948.7	641	4	-24	119	0	-70	multi-exon	FALSE	canonical	3	147	junction_3	1146.38165062465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCAGTATTTAATAC	NA	False	NA	-18	True	AATAAA	-23	NA	16727266	16713484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727135
ENSMUST00000186993.2	chr2	-	3144	1	FSM	ENSMUSG00000085385.8	ENSMUST00000186993.2	3144	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCGTGAGTTCTT	NA	False	NA	2	True	NA	NA	NA	158198763	158195619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_158195600_158198800
ENSMUST00000187039.7	chr14	+	3875	38	FSM	ENSMUSG00000021843.18	ENSMUST00000187039.7	3875	38	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_37	190.276539362324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTAGTTTTATAATA	2384	False	NA	108	True	AAAAAG	-20	NA	47901243	47973748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ENSMUST00000187048.7	chr1	-	3201	8	FSM	ENSMUSG00000026484.14	ENSMUST00000187048.7	3201	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	248.196597519805	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTAGATGTGTACTC	NA	False	NA	-5	True	CATAAA	-20	NA	151376562	151345155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151363022_151363207_151376469
ENSMUST00000187049.7	chr1	-	2683	12	FSM	ENSMUSG00000026309.15	ENSMUST00000187049.7	2683	12	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_8	208.010091935722	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTGGAAGGTAAGATAT	NA	False	NA	-13	True	AATAAA	-26	NA	91326422	91301582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_91303261_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316076_91316169_91318328_91318386_91318853_91318920_91326372
ENSMUST00000187090.2	chr17	-	764	3	FSM	ENSMUSG00000100572.2	ENSMUST00000187090.2	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	7	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCAGAGGAACGTATG	NA	False	NA	NA	False	NA	NA	NA	69584203	69582356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_69582902_69583120_69583191_69584054
ENSMUST00000187105.7	chr1	-	2342	11	FSM	ENSMUSG00000026309.15	ENSMUST00000187105.7	2342	11	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_8	35.8725521812987	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-17	NA	91326477	91303553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91316187_91318328_91318386_91318853_91318920_91326372
ENSMUST00000187117.2	chr1	-	492	1	FSM	ENSMUSG00000101249.2	ENSMUST00000187117.2	492	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	317	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGGAATCGAACCC	NA	False	NA	NA	False	AGTAAA	-5	NA	24655278	24654786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_24654800_24655300
ENSMUST00000187141.7	chr1	-	675	6	FSM	ENSMUSG00000026260.13	ENSMUST00000187141.7	675	6	0	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_2	99.0143423954328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGATTCCCGCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	92398584	92389943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538
ENSMUST00000187160.2	chr15	-	635	3	FSM	ENSMUSG00000062683.12	ENSMUST00000187160.2	635	3	0	0	0	0	multi-exon	FALSE	canonical	3	4743	junction_1	34	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTAATTTTTTTTAAA	7285	False	NA	NA	False	NA	NA	NA	102576178	102573173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102573683_102574197_102574291_102576145
ENSMUST00000187190.7	chr7	-	3341	26	FSM	ENSMUSG00000030491.17	ENSMUST00000187190.7	3341	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	220.748928876224	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCCTGTATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	35236963	35170616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
ENSMUST00000187211.2	chr9	+	4262	1	FSM	ENSMUSG00000032463.11	ENSMUST00000187211.2	4262	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTTTAATGAACA	3572	False	NA	NA	False	NA	NA	NA	98868453	98872715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98868500_98872700
ENSMUST00000187230.2	chr12	-	894	2	FSM	ENSMUSG00000040867.14	ENSMUST00000187230.2	894	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCTAGGGTCCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	109003013	109000535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_109001338_109002921
ENSMUST00000187243.2	chrY	+	177	1	FSM	ENSMUSG00000101145.2	ENSMUST00000187243.2	177	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGGCAATAGAAGGCAG	NA	False	NA	NA	False	AAGAAA	-2	NA	3909380	3909557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrY_+_3909400_3909600
ENSMUST00000187262.7	chr14	+	3913	39	FSM	ENSMUSG00000021843.18	ENSMUST00000187262.7	3913	39	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_35	133.427065679927	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGTTTAGTTTTATAA	2384	False	NA	106	True	AAAAAG	-18	NA	47901243	47973746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUST00000187279.7	chr10	+	1528	4	FSM	ENSMUSG00000019818.16	ENSMUST00000187279.7	1528	4	0	0	0	0	multi-exon	FALSE	canonical	3	1657	junction_2	7.25718035235908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTAGCAATTGTGTC	NA	False	NA	NA	False	AATAAA	-22	NA	41395496	41401268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102
ENSMUST00000187282.3	chr7	-	4611	6	FSM	ENSMUSG00000044452.11	ENSMUST00000187282.3	944	6	-36	-3631	0	0	multi-exon	FALSE	canonical	3	8	junction_4	23.3957261054236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCTAAGTTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	35502428	35471767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35500862_35500954_35502258
ENSMUST00000187307.2	chr12	-	2381	3	FSM	ENSMUSG00000045690.9	ENSMUST00000187307.2	2381	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGC	6420	False	NA	NA	False	NA	NA	NA	75716301	75678170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_75680283_75687577_75687791_75716245
ENSMUST00000187324.8	chr9	-	1832	14	FSM	ENSMUSG00000023262.14	ENSMUST00000187324.8	1832	14	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_13	61.5898823628318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTCTTAATACTGTGGAC	NA	False	NA	-17	True	AATAAA	-17	NA	106315360	106310189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106314000_106314087_106314153_106314827_106314933_106315331
ENSMUST00000187407.7	chr1	-	4336	10	FSM	ENSMUSG00000026393.11	ENSMUST00000187407.7	4336	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	46.0549859232967	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGATGATCATCGTCT	NA	False	NA	0	True	AATAAA	-18	NA	138547879	138411574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547641
ENSMUST00000187446.2	chr9	+	4124	8	FSM	ENSMUSG00000032571.15	ENSMUST00000187446.2	4124	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	10.1055652479014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAATTGGAATAAAAATG	NA	False	NA	NA	False	NA	NA	NA	105520213	105541015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240
ENSMUST00000187500.7	chr1	-	3403	10	FSM	ENSMUSG00000025982.14	ENSMUST00000187500.7	3403	10	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_5	107.350930234545	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTTGCTTTTAAAAATT	NA	False	NA	NA	False	AAAAAG	-13	NA	55066623	55042309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
ENSMUST00000187521.7	chr9	-	5290	28	FSM	ENSMUSG00000035941.16	ENSMUST00000187521.7	5290	28	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_18	46.0379458210114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTCAGTCTGTAGA	NA	False	NA	-10	True	ATTAAA	-18	NA	85631387	85569594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ENSMUST00000187522.2	chr1	-	3057	1	FSM	ENSMUSG00000026409.15	ENSMUST00000187522.2	3057	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTACAATGAAATTTTC	9638	False	NA	NA	False	AATAAA	-20	NA	130619982	130616925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_130616900_130620000
ENSMUST00000187524.7	chr7	+	2052	7	FSM	ENSMUSG00000045411.17	ENSMUST00000187524.7	676	7	-12	-1364	0	0	multi-exon	FALSE	canonical	0	0	junction_2	348.685826433418	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896233_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000187531.8	chr14	-	4260	25	FSM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	0	0	0	0	multi-exon	FALSE	canonical	1	98	junction_11	68.6814304516795	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514289	47478400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ENSMUST00000187578.2	chr15	-	1877	9	FSM	ENSMUSG00000060036.15	ENSMUST00000187578.2	1877	9	0	0	0	0	multi-exon	FALSE	canonical	3	16287	junction_8	5123.08483118326	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
ENSMUST00000187609.2	chr7	-	780	3	FSM	ENSMUSG00000030717.10	ENSMUST00000187609.2	587	3	0	-193	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1865.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGGCGTGTGTTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	126224647	126222420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126222752_126224061_126224358_126224494
ENSMUST00000187656.7	chr13	-	2310	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	23.1708629293104	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGATCAGTCG	NA	False	NA	-12	True	NA	NA	NA	62530991	62516141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
ENSMUST00000187690.7	chr17	+	3185	3	FSM	ENSMUSG00000034595.18	ENSMUST00000187690.7	3185	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCCTTCCTTTGTTTC	9886	False	NA	15	True	AATAAA	-22	NA	36177506	36186488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36179678_36184617_36184832_36185688
ENSMUST00000187691.7	chr1	-	2813	12	FSM	ENSMUSG00000055322.17	ENSMUST00000187691.7	2813	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	24.3677065799583	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	NA	False	NA	-4	True	NA	NA	NA	73967672	73953069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73967619
ENSMUST00000187709.7	chr1	+	5855	10	FSM	ENSMUSG00000026782.16	ENSMUST00000187709.7	1671	10	-184	-4000	0	0	multi-exon	FALSE	canonical	3	29	junction_7	51.9553464495364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	15	True	AATAAA	-17	NA	60448777	60520317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60503687_60503775_60509824_60509999_60515898
ENSMUST00000187714.2	chr1	-	876	1	FSM	ENSMUSG00000100131.2	ENSMUST00000187714.2	876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAAGTAGCCAAGGAG	NA	False	NA	NA	False	TTTAAA	-29	NA	24651491	24650615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_24650600_24651500
ENSMUST00000187758.7	chr1	-	3977	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAAACAAGTGTGCCTG	NA	False	NA	NA	False	NA	NA	NA	87936256	87874164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ENSMUST00000187758.7-0	chr1	-	5316	32	FSM	ENSMUSG00000005501.15	ENSMUST00000187758.7	3977	32	-17	-1322	0	0	multi-exon	FALSE	canonical	3	37	junction_30	6.87528260700014	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTCATATACTGCCT	NA	False	NA	-9	True	AATAAA	-24	NA	87936273	87872842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87893027_87893065_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ENSMUST00000187771.8	chr9	-	1540	10	FSM	ENSMUSG00000062270.15	ENSMUST00000187771.8	1540	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2197.25222342209	2204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996342	89973723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89996266
ENSMUST00000187814.7	chr12	+	4098	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	3.2659863237109	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	86994116	87012136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
ENSMUST00000187834.2	chr1	+	1923	1	FSM	ENSMUSG00000026439.15	ENSMUST00000187834.2	1923	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACCACAAGTATACATGC	NA	False	NA	5	True	AATAAA	-14	NA	132431470	132433393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_132431500_132433400
ENSMUST00000187836.7	chr1	-	1862	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_13	52.2384156632446	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75293793	75285208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
ENSMUST00000187898.2	chr12	-	133	1	FSM	ENSMUSG00000100306.2	ENSMUST00000187898.2	133	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTCCATCTGCTCAGT	NA	False	NA	NA	False	NA	NA	NA	87484586	87484453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87484500_87484600
ENSMUST00000187952.2	chr9	+	1090	4	FSM	ENSMUSG00000032369.14	ENSMUST00000187952.2	1090	4	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	14.2672897060218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGTTGATGTTACTTT	NA	False	NA	NA	False	NA	NA	NA	92148347	92154030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_92148665_92148764_92148927_92151867_92152030_92153581
ENSMUST00000187968.2	chr1	-	416	2	FSM	ENSMUSG00000048874.16	ENSMUST00000187968.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTAGGATCTGCAAGTA	NA	False	NA	NA	False	NA	NA	NA	30912333	30902150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30902337_30912103
ENSMUST00000187973.2	chrX	-	582	1	FSM	ENSMUSG00000095597.3	ENSMUST00000187973.2	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAATGACTGAATAA	NA	False	NA	NA	False	NA	NA	NA	151693116	151692534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151692500_151693100
ENSMUST00000187985.7	chr1	+	3273	10	FSM	ENSMUSG00000031506.12	ENSMUST00000187985.7	1990	10	0	-1283	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.23330569358242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACCCAATTCTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	135060437	135073055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_135060516_135061487_135061662_135062177_135062362_135062568_135062654_135063836_135063914_135065061_135065200_135065505_135065617_135066861_135067017_135069680_135069795_135070898
ENSMUST00000187992.2	chr1	-	1431	1	FSM	ENSMUSG00000045658.17	ENSMUST00000187992.2	1431	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	462	False	NA	NA	False	NA	NA	NA	84262344	84260913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84260900_84262300
ENSMUST00000188008.7	chr9	+	1576	12	FSM	ENSMUSG00000032411.16	ENSMUST00000188008.7	1576	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	138.805946951458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAGACAGGAGAGAA	NA	False	NA	-13	True	NA	NA	NA	96078369	96200017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUST00000188025.7	chr15	-	1781	8	FSM	ENSMUSG00000060036.15	ENSMUST00000188025.7	1781	8	0	0	0	0	multi-exon	FALSE	canonical	3	23824	junction_4	2825.56158044697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTTTTCCCACATTTC	4341	False	NA	-4	True	AATAAA	-14	NA	79966784	79961994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965233_79965815_79965985_79966590
ENSMUST00000188038.3	chr7	+	5195	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	-1	10827	0	4552	multi-exon	FALSE	canonical	3	26	junction_1	12.1819538662728	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACCTGGAGGTTCTGTT	NA	False	NA	16	True	AATAAA	-19	NA	39201923	39219186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ENSMUST00000188090.7	chr1	-	7105	11	FSM	ENSMUSG00000054387.14	ENSMUST00000188090.7	7105	11	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	81.9383304687129	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953154	132913957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
ENSMUST00000188111.7	chr7	+	2081	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	52	-2	0	0	multi-exon	FALSE	canonical	3	44	junction_1	296.487211641019	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUST00000188112.2	chr1	-	716	1	FSM	ENSMUSG00000041859.11	ENSMUST00000188112.2	716	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCTTTGTGCTTTAA	NA	False	NA	-12	True	AGTAAA	-24	NA	20873945	20873229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_20873200_20873900
ENSMUST00000188124.7	chr7	+	2048	10	FSM	ENSMUSG00000053877.13	ENSMUST00000188124.7	2048	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	13.723009424114	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCAGTTATTGAGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	127111154	127128494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309
ENSMUST00000188142.7	chr9	-	7524	4	FSM	ENSMUSG00000074305.10	ENSMUST00000188142.7	7524	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.4631467093403	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACTTGAAGTGCATGTC	9745	False	NA	NA	False	AATAAA	-24	NA	56151349	56108409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56151239
ENSMUST00000188151.2	chr4	+	2048	4	FSM	ENSMUSG00000028936.16	ENSMUST00000188151.2	2048	4	0	0	0	0	multi-exon	FALSE	canonical	3	4243	junction_1	691.49805173663	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCACTGTGCAAGGCTT	NA	False	NA	28	True	ATTAAA	-18	NA	152410325	152418527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUST00000188165.2	chr1	-	341	3	FSM	ENSMUSG00000034088.16	ENSMUST00000188165.2	341	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	203.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAAGGTGACAGGCCCC	NA	False	NA	NA	False	NA	NA	NA	93406099	93368409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93368515_93369907_93369973_93405928
ENSMUST00000188203.2	chr1	-	1006	1	FSM	ENSMUSG00000097760.3	ENSMUST00000188203.2	1006	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTTATAGCTCATATAT	NA	False	NA	NA	False	AATAAA	-11	NA	132404802	132403796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132403800_132404800
ENSMUST00000188204.7	chr1	-	2317	6	FSM	ENSMUSG00000026107.12	ENSMUST00000188204.7	972	6	-26	-1319	0	0	multi-exon	FALSE	canonical	2	4	junction_5	20.9227149289952	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAGGAGTAACAGAACT	NA	False	NA	-1	True	AATAAA	-32	NA	51517584	51508646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51517530
ENSMUST00000188205.2	chr1	-	725	4	FSM	ENSMUSG00000042305.13	ENSMUST00000188205.2	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	71.4749373323731	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGGACTTGTTGATAT	NA	False	NA	NA	False	NA	NA	NA	134289691	134283179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUST00000188211.8	chr13	+	5610	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	74.6898546956926	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9143916	9224024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ENSMUST00000188231.2	chr1	-	681	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTCACTATGAAGCTAA	NA	False	NA	NA	False	ACTAAA	-32	NA	24654646	24653965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_24654000_24654600
ENSMUST00000188290.7	chr1	+	1855	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188290.7	1855	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	6.24400947476761	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTGGCCTGTGTTCC	2259	False	NA	4	True	AATAAA	-14	NA	75213130	75222334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
ENSMUST00000188299.2	chr1	-	345	1	FSM	ENSMUSG00000101939.2	ENSMUST00000188299.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGGTAATTAGTTTAAA	NA	False	NA	NA	False	AAAAAG	-18	NA	24652200	24651855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_24651900_24652200
ENSMUST00000188309.2	chr9	+	205	1	FSM	ENSMUSG00000102064.2	ENSMUST00000188309.2	205	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	84772597	84772802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_84772600_84772800
ENSMUST00000188313.7	chr1	+	4631	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_23	40.426725727682	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAATTGGTCTTAATTT	3312	False	NA	8	True	AATAAA	-18	NA	43973174	44042160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUST00000188330.7	chr14	+	3819	38	FSM	ENSMUSG00000021843.18	ENSMUST00000188330.7	3819	38	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_22	153.882868378594	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGACACCTTCAGAGTTT	2384	False	NA	96	True	AAAAAG	-8	NA	47901243	47973736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUST00000188333.2	chr1	+	3918	1	FSM	ENSMUSG00000026150.15	ENSMUST00000188333.2	3918	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAATGGTAGTCACTCCA	763	False	NA	NA	False	NA	NA	NA	82719698	82723616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82719700_82723600
ENSMUST00000188371.7	chr1	+	2268	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_7	69.1671798285292	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAGCTGGCATCTTGA	NA	False	NA	NA	False	AATAAA	-24	NA	15875869	15914276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUST00000188414.4	chr6	-	3121	18	FSM	ENSMUSG00000015112.16	ENSMUST00000188414.4	3121	18	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	125.074538329783	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	NA	False	NA	-4	True	AATAAA	-15	NA	6217173	6041218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
ENSMUST00000188445.7	chr9	+	2711	21	FSM	ENSMUSG00000038379.16	ENSMUST00000188445.7	2711	21	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_10	27.9819584732735	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGTCTCGACAACATT	NA	False	NA	0	True	AATAAA	-15	NA	83716741	83751546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
ENSMUST00000188454.7	chr1	-	8463	10	FSM	ENSMUSG00000025938.17	ENSMUST00000188454.7	8463	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.330686329267	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTCTAGATTGT	NA	False	NA	NA	False	AATAAA	-17	NA	13062874	12936772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_12942553_12946533_12946599_12949361_12949604_12951516_12951677_12964650_12964850_12991261_12991427_13009212_13009425_13014203_13014337_13059803_13061188_13062751
ENSMUST00000188495.8	chr10	-	3693	16	FSM	ENSMUSG00000019982.16	ENSMUST00000188495.8	3693	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	4.59951688284276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGATGTCTCTCGATT	NA	False	NA	-4	True	AATAAA	-22	NA	21036804	21000833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21020867_21021225_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
ENSMUST00000188497.7	chr1	-	856	8	FSM	ENSMUSG00000026341.17	ENSMUST00000188497.7	856	8	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_7	770.373829211957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGCAGTCCTTGGAAACT	NA	False	NA	NA	False	NA	NA	NA	125363464	125333616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ENSMUST00000188503.2	chr15	+	1211	3	FSM	ENSMUSG00000022587.15	ENSMUST00000188503.2	1211	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	177	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8402	False	NA	27	True	AATAAA	-15	NA	74827516	74831180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_74827567_74829628_74829727_74830117
ENSMUST00000188509.2	chr9	+	556	2	FSM	ENSMUSG00000093803.6	ENSMUST00000188509.2	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGTCTCGCGTGTTGGG	NA	False	NA	NA	False	NA	NA	NA	124196397	124197358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_124196748_124197152
ENSMUST00000188512.7	chr1	-	656	5	FSM	ENSMUSG00000026374.15	ENSMUST00000188512.7	656	5	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_2	75.9584590417684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAAGAAAGTAGAGGAGG	NA	False	NA	NA	False	NA	NA	NA	118237716	118228618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502
ENSMUST00000188534.2	chr14	-	2471	1	FSM	ENSMUSG00000040721.10	ENSMUST00000188534.2	2471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAACACAGAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	55329499	55327028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55327000_55329500
ENSMUST00000188553.7	chr14	+	3918	39	FSM	ENSMUSG00000021843.18	ENSMUST00000188553.7	3918	39	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_22	154.023654063525	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTAGTTTTATAATA	2384	False	NA	108	True	AAAAAG	-20	NA	47901243	47973748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUST00000188557.8	chr9	+	2552	21	FSM	ENSMUSG00000023259.18	ENSMUST00000188557.8	2552	21	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	9.81121806912883	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTCTGTCCAACTTC	NA	False	NA	-2	True	AATACA	-12	NA	108731333	108742096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108731386_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ENSMUST00000188570.2	chr1	+	1588	2	FSM	ENSMUSG00000056211.14	ENSMUST00000188570.2	1588	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	7483	False	NA	19	True	AATAAA	-15	NA	128163115	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_128163364_128164133
ENSMUST00000188593.2	chr1	-	1205	2	FSM	ENSMUSG00000026202.14	ENSMUST00000188593.2	1205	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCTGTTCACTGTGTTT	NA	False	NA	-77	True	NA	NA	NA	75194078	75192255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75193238_75193855
ENSMUST00000188632.2	chrX	+	1177	4	FSM	ENSMUSG00000087193.8	ENSMUST00000188632.2	1177	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	23.6971634495683	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCCTGGGCCACTGGAT	NA	False	NA	26	True	TATAAA	-16	NA	7917829	7939195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_7917897_7926454_7926526_7936874_7937304_7938585
ENSMUST00000188641.7	chr1	-	2014	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCAGCACTTGGTCTTTA	NA	False	NA	0	True	AATAAA	-23	NA	16727108	16711948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ENSMUST00000188641.7-0	chr1	-	478	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	0	1536	0	-70	multi-exon	FALSE	canonical	3	1161	junction_3	673.864641864785	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCAGTATTTAATAC	NA	False	NA	-18	True	AATAAA	-23	NA	16727108	16713484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ENSMUST00000188685.7	chr8	+	3099	4	FSM	ENSMUSG00000056019.13	ENSMUST00000188685.7	7186	4	62	4025	0	790	multi-exon	FALSE	canonical	3	13	junction_3	3.85861230093008	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTTTATCTTTGAT	NA	False	NA	NA	False	NA	NA	NA	72635924	72645546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72636053_72641107_72641235_72641444_72641506_72642763
ENSMUST00000188746.7	chr17	-	1626	16	FSM	ENSMUSG00000096780.8	ENSMUST00000188746.7	1626	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	301.401319764124	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAATTCAAAGGCATAT	9421	False	NA	NA	False	GGGGCT	-7	NA	6734421	6708582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716930_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317
ENSMUST00000188750.7	chr9	+	1713	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGAGAGAACTCATGT	NA	False	NA	-6	True	NA	NA	NA	96078389	96200024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUST00000188750.7-0	chr9	+	2756	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	-33	-1010	0	0	multi-exon	FALSE	canonical	3	208	junction_3	94.2279120445955	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUST00000188775.2	chr13	+	411	1	FSM	ENSMUSG00000101355.2	ENSMUST00000188775.2	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGTCTTTCTGTGTTTT	4636	False	NA	NA	False	NA	NA	NA	21901828	21902239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21901800_21902200
ENSMUST00000188789.2	chr1	+	1751	1	FSM	ENSMUSG00000048174.3	ENSMUST00000188789.2	1751	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGGCAGTCTAACCCT	NA	False	NA	6	True	AATAAA	-16	NA	132434626	132436377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_132434600_132436400
ENSMUST00000188797.7	chr1	-	3612	17	FSM	ENSMUSG00000026235.15	ENSMUST00000188797.7	3612	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_14	22.2548274257519	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATGGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	77491725	77349775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ENSMUST00000188815.2	chr18	+	5551	38	FSM	ENSMUSG00000024421.17	ENSMUST00000188815.2	5551	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	23.7260971177562	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	12637255	12716070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664891_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ENSMUST00000188852.2	chr17	-	845	4	FSM	ENSMUSG00000099474.2	ENSMUST00000188852.2	845	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	117.235754879739	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTTCCTCTGAGATG	NA	False	NA	-1	True	AATAAA	-25	NA	30845879	30841414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30841669_30843173_30843588_30843854_30843908_30845755
ENSMUST00000188873.7	chr1	+	2477	9	FSM	ENSMUSG00000049339.17	ENSMUST00000188873.7	2477	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.7840746701658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGTCTGCCTGCT	NA	False	NA	11	True	AATAAA	-18	NA	75119421	75124553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75121035_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ENSMUST00000188890.2	chr1	-	1723	1	FSM	ENSMUSG00000026098.14	ENSMUST00000188890.2	1723	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGCGATTCTGAGAT	6055	False	NA	NA	False	NA	NA	NA	53336174	53334451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_53334500_53336200
ENSMUST00000188894.7	chr1	-	8043	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_21	441.858289425336	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692331	71624678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUST00000188931.7	chr1	+	3066	9	FSM	ENSMUSG00000026203.17	ENSMUST00000188931.7	3066	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	4.89738450603993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCGGTGGCCTGTGTT	2178	False	NA	2	True	AATAAA	-12	NA	75213049	75222332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101
ENSMUST00000188952.7	chr1	-	6315	18	FSM	ENSMUSG00000026235.15	ENSMUST00000188952.7	6315	18	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_15	30.5422731607683	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAAATCTGGTTGTCTTT	NA	False	NA	-7	True	AATAAA	-19	NA	77491716	77343825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ENSMUST00000188976.2	chr7	-	2193	3	FSM	ENSMUSG00000100826.7	ENSMUST00000188976.2	2193	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	5.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATAGTTTGTGTTTTTC	NA	False	NA	-6	True	ATTAAA	-20	NA	59624179	59619324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_59620292_59621627_59621693_59623018
ENSMUST00000188997.7	chr13	-	5084	24	FSM	ENSMUSG00000021709.15	ENSMUST00000188997.7	5084	24	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	14.3384686218459	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGCCCAGGGGGTCCC	NA	False	NA	NA	False	NA	NA	NA	104056803	103956114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ENSMUST00000189013.8	chr16	-	982	6	FSM	ENSMUSG00000023791.19	ENSMUST00000189013.8	982	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	129.408500493592	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	-2	True	AATAAA	-28	NA	31918545	31903235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
ENSMUST00000189066.2	chr9	-	2145	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189066.2	2145	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	9.53729521405309	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGCACTGATTGCTTC	NA	False	NA	NA	False	AATAAA	-17	NA	103638993	103361634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486992_103630053_103630167_103638953
ENSMUST00000189071.7	chr6	+	511	3	FSM	ENSMUSG00000085412.8	ENSMUST00000189071.7	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	103.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCCCGATCGAATGGAA	823	False	NA	NA	False	AAAAAG	-27	NA	52079973	52090664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_52080017_52083750_52083877_52090322
ENSMUST00000189101.7	chr14	+	3761	37	FSM	ENSMUSG00000021843.18	ENSMUST00000189101.7	3761	37	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_22	143.1073692575	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTTAGTTTTATAATAAA	2384	False	NA	NA	False	AAAAAG	-22	NA	47901243	47973750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
ENSMUST00000189220.7	chr1	+	8044	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	82817203	82878903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ENSMUST00000189220.7-0	chr1	+	3243	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	0	4801	0	0	multi-exon	FALSE	canonical	3	119	junction_11	113.067826251915	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817203	82874102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ENSMUST00000189246.7	chr12	+	4149	4	FSM	ENSMUSG00000034157.13	ENSMUST00000189246.7	1454	4	0	-2695	0	0	multi-exon	FALSE	canonical	2	12	junction_1	43.0219582177391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	86993816	87012136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_86994025_86999517_86999706_87007045_87007216_87008553
ENSMUST00000189257.7	chr1	-	4974	26	FSM	ENSMUSG00000033364.14	ENSMUST00000189257.7	4974	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_24	62.7680938056908	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGAGTCTCCTTTTGTCT	4778	False	NA	-1	True	TTTAAA	-32	NA	74583443	74476888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74570221_74570272_74583333
ENSMUST00000189282.3	chr1	-	408	3	FSM	ENSMUSG00000026209.16	ENSMUST00000189282.3	408	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	420	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAGAAAACAAGGTACTAA	NA	False	NA	NA	False	NA	NA	NA	75294026	75293197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75293274_75293353_75293448_75293788
ENSMUST00000189289.7	chr1	+	653	3	FSM	ENSMUSG00000026020.10	ENSMUST00000189289.7	653	3	0	0	0	0	multi-exon	FALSE	canonical	3	1848	junction_2	162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCACAATTCAGTAAGAG	NA	False	NA	NA	False	NA	NA	NA	59724161	59731847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_59724386_59729644_59729722_59731495
ENSMUST00000189303.7	chr1	-	3287	23	FSM	ENSMUSG00000026313.17	ENSMUST00000189303.7	3287	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	31.0805405358401	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGTGCTTAACATTT	NA	False	NA	NA	False	AATACA	-15	NA	91934577	91860679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91934438
ENSMUST00000189330.2	chr13	+	4666	2	FSM	ENSMUSG00000033499.15	ENSMUST00000189330.2	4666	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAAACAGCTG	NA	False	NA	NA	False	NA	NA	NA	9218396	9223157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_9218839_9218933
ENSMUST00000189400.7	chr1	+	5330	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTACATTATTTTG	9100	False	NA	NA	False	ATTAAA	-21	NA	20960829	21009874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_20960911_21002283_21002464_21004805
ENSMUST00000189452.2	chr17	-	2078	4	FSM	ENSMUSG00000062101.13	ENSMUST00000189452.2	2078	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	17.6823829464998	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATATTTATGTTGT	NA	False	NA	NA	False	AATAAA	-12	NA	56256500	56245380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56256223
ENSMUST00000189529.7	chr1	-	1801	17	FSM	ENSMUSG00000026245.17	ENSMUST00000189529.7	1801	17	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	338.950378927359	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465499	78401721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456651_78458944_78459001_78465421
ENSMUST00000189533.7	chr14	+	3941	39	FSM	ENSMUSG00000021843.18	ENSMUST00000189533.7	3941	39	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_38	191.341048430295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTAGTTTTATAATA	2384	False	NA	108	True	AAAAAG	-20	NA	47901243	47973748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ENSMUST00000189563.2	chr1	-	3274	1	FSM	ENSMUSG00000052331.15	ENSMUST00000189563.2	3274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTTTCTTTCATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	54687772	54684498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_54684500_54687800
ENSMUST00000189582.2	chr1	-	989	1	FSM	ENSMUSG00000026260.13	ENSMUST00000189582.2	989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAATCTATT	NA	False	NA	NA	False	NA	NA	NA	92401489	92400500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_92400500_92401500
ENSMUST00000189588.7	chr9	-	2850	6	FSM	ENSMUSG00000042757.17	ENSMUST00000189588.7	2850	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	14.324803663576	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAATAAAAGATT	NA	False	NA	NA	False	ATTAAA	-6	NA	103639036	103360976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103361983_103366387_103366543_103376000_103377408_103486909_103486996_103630053_103630167_103638953
ENSMUST00000189654.2	chr15	+	818	3	FSM	ENSMUSG00000022583.13	ENSMUST00000189654.2	818	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAGATCTCAGTTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	75140550	75144084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75140649_75141628_75141746_75143481
ENSMUST00000189661.7	chr1	-	2279	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	35	6057	0	143	multi-exon	FALSE	canonical	2	51	junction_13	9.26258903091115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATAATCTTGTTATGCA	1734	False	NA	NA	False	AAGAAA	-42	NA	156301866	156258151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ENSMUST00000189670.7	chr1	-	2847	18	FSM	ENSMUSG00000026219.15	ENSMUST00000189670.7	2847	18	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_16	283.0431148152	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	NA	False	NA	17	True	NA	NA	NA	84726998	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878
ENSMUST00000189672.7	chr10	+	2149	4	FSM	ENSMUSG00000096856.8	ENSMUST00000189672.7	4735	4	0	2586	0	544	multi-exon	FALSE	canonical	2	7	junction_1	17.4610678049451	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTGCCATCTATTT	NA	False	NA	NA	False	AATAAA	-20	NA	81484892	81500609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81485001_81497831_81497959_81498158_81498220_81498756
ENSMUST00000189688.2	chr2	+	2090	13	FSM	ENSMUSG00000003283.16	ENSMUST00000189688.2	2090	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	8.17346655682615	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTCAGCTTCTCTGTCT	NA	False	NA	17	True	AATAAA	-27	NA	152950387	152993359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_152950675_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
ENSMUST00000189690.7	chr1	-	2060	12	FSM	ENSMUSG00000026301.17	ENSMUST00000189690.7	2060	12	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	12	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCAGTAATTTGGTCAC	NA	False	NA	-4	True	AATAAA	-17	NA	90017866	89969856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_89970465_89973313_89973553_89975510_89975689_89980109_89980197_89994446_89994647_89998233_89998342_90001468_90001552_90005528_90005597_90008581_90008675_90009037_90009145_90017196_90017273_90017653
ENSMUST00000189694.2	chr2	+	5463	3	FSM	ENSMUSG00000035829.14	ENSMUST00000189694.2	5463	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTCCTTTGTTCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	28337952	28345517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_28337995_28338703_28338921_28340313
ENSMUST00000189756.2	chr1	-	2872	3	FSM	ENSMUSG00000016526.9	ENSMUST00000189756.2	663	3	-95	-2114	0	-306	multi-exon	FALSE	canonical	0	0	junction_2	110.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGGAAGTGCTGCTCC	237	False	NA	-21	True	NA	NA	NA	131066077	131055497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_131057983_131063996_131064109_131065802
ENSMUST00000189837.2	chr6	+	5469	3	FSM	ENSMUSG00000032712.17	ENSMUST00000189837.2	5469	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	117	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTTAAGTCTTCATG	NA	False	NA	7	True	AATAAA	-19	NA	149226955	149237156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_149231283_149232929_149233005_149236089
ENSMUST00000189896.2	chr9	-	1023	5	FSM	ENSMUSG00000032803.16	ENSMUST00000189896.2	1023	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	184.859913177519	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAGTGGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	103242818	103233148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103233226_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ENSMUST00000189897.2	chr19	-	5596	26	FSM	ENSMUSG00000036098.16	ENSMUST00000189897.2	3339	26	-144	-2113	0	0	multi-exon	FALSE	canonical	2	5	junction_20	4.43693587963585	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	7142	False	NA	0	True	NA	NA	NA	10218112	10185635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10217922
ENSMUST00000189909.7	chr2	+	738	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166904853	166907782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
ENSMUST00000189909.7-0	chr2	+	451	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	287	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	47.5105251496971	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGTCTTGAGTTTC	NA	False	NA	35	True	AATAAA	-45	NA	166905140	166907782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
ENSMUST00000189932.7	chr6	+	5269	5	FSM	ENSMUSG00000032712.17	ENSMUST00000189932.7	5269	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	95.7405347802069	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAGATTGCATTTG	NA	False	NA	NA	False	NA	NA	NA	149210971	149236428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_149211403_149211819_149211858_149226902_149231283_149232923_149233005_149236089
ENSMUST00000189935.2	chr9	-	1316	1	FSM	ENSMUSG00000057367.13	ENSMUST00000189935.2	1316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAAAAAGTTCA	-26	True	NA	NA	False	NA	NA	NA	7837064	7835748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_7835700_7837100
ENSMUST00000189936.7	chr1	+	1696	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGGATTATTTGTTT	NA	False	NA	NA	False	AATAAA	-24	NA	143653009	143683043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ENSMUST00000189936.7-0	chr1	+	1299	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	33	364	0	0	multi-exon	FALSE	canonical	3	615	junction_8	216.947090323885	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	25	True	NA	NA	NA	143653042	143682679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ENSMUST00000189941.2	chr1	-	678	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGACCCACCAAACTCAT	NA	False	NA	NA	False	AATACA	-1	NA	24653732	24653054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_24653100_24653700
ENSMUST00000189946.7	chr1	+	2375	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACATTCAGGTCCCACT	9282	False	NA	NA	False	NA	NA	NA	131838271	131860417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
ENSMUST00000189946.7-0	chr1	+	6017	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	0	-3642	0	0	multi-exon	FALSE	canonical	3	331	junction_5	461.648284832608	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9282	False	NA	27	True	TATAAA	-18	NA	131838271	131864059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
ENSMUST00000189951.7	chr1	-	2172	9	FSM	ENSMUSG00000034088.16	ENSMUST00000189951.7	2172	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	142.765049556956	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAATGAAAAAGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	93373374	93356290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ENSMUST00000189992.2	chr1	-	2523	1	FSM	ENSMUSG00000040648.16	ENSMUST00000189992.2	2523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATAAAAAAGAAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	97649032	97646509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_97646500_97649000
ENSMUST00000190033.4	chr9	-	1408	4	FSM	ENSMUSG00000097195.11	ENSMUST00000190033.4	1408	4	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	320.936476926856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88405016	88403104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88403502_88403702_88403770_88403970_88404435_88404536
ENSMUST00000190033.4-0	chr9	-	1336	4	FSM	ENSMUSG00000097195.11	ENSMUST00000190033.4	1408	4	72	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	320.936476926856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88403502_88403702_88403770_88403970_88404435_88404536
ENSMUST00000190036.7	chr5	-	5463	6	FSM	ENSMUSG00000015882.19	ENSMUST00000190036.7	5463	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	19.1562000407179	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCAGATGTTTTTCAA	NA	False	NA	-7	True	AATAAA	-18	NA	46014809	45854525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45859340_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ENSMUST00000190036.7-0	chr5	-	2937	6	FSM	ENSMUSG00000015882.19	ENSMUST00000190036.7	5463	6	-46	2572	0	694	multi-exon	FALSE	canonical	3	25	junction_1	19.1562000407179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTAATAGCCTGAGT	NA	False	NA	NA	False	AATAAA	-25	NA	46014855	45857097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45859340_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ENSMUST00000190059.7	chr17	-	1859	9	FSM	ENSMUSG00000096780.8	ENSMUST00000190059.7	1859	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	312.308641411025	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGACTTTCTGTTTTAA	NA	False	NA	NA	False	AATACA	-26	NA	6716494	6707876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181
ENSMUST00000190064.2	chr3	-	508	2	FSM	ENSMUSG00000078784.9	ENSMUST00000190064.2	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	4849	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTGAAGTACAATTTTT	NA	False	NA	NA	False	TATAAA	-10	NA	14676303	14674243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_14674718_14676269
ENSMUST00000190068.7	chr7	-	3263	15	FSM	ENSMUSG00000025507.14	ENSMUST00000190068.7	3263	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	16.8336700983354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTGCAGAGATCATTC	NA	False	NA	-1	True	NA	NA	NA	141023266	141018025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021698_141022063_141022478_141022880
ENSMUST00000190096.7	chr1	+	4078	17	FSM	ENSMUSG00000055013.17	ENSMUST00000190096.7	4078	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_11	88.5197497384058	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCCATGTTAATTTAT	NA	False	NA	39	True	AATAAA	-40	NA	89382595	89817723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ENSMUST00000190113.2	chr9	+	904	1	FSM	ENSMUSG00000101698.2	ENSMUST00000190113.2	904	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTGTTGTGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	88709574	88710478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_88709600_88710500
ENSMUST00000190116.7	chr1	-	2187	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	-84	3455	0	0	multi-exon	FALSE	canonical	3	370	junction_4	24.3770383763081	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTAGACTGTACAT	NA	False	NA	-1	True	AATAAA	-38	NA	93682586	93633111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
ENSMUST00000190117.2	chr1	-	99	2	FSM	ENSMUSG00000099969.2	ENSMUST00000190117.2	99	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGATGGTTGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	152965253	152942226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_152942246_152965173
ENSMUST00000190175.2	chr1	-	3350	3	FSM	ENSMUSG00000025982.14	ENSMUST00000190175.2	3350	3	0	0	0	0	multi-exon	FALSE	canonical	2	1032	junction_2	287.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCATAGTATACCAGT	NA	False	NA	-13	True	AATAAA	-13	NA	55030274	55024331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_55026652_55027097_55027315_55029461
ENSMUST00000190182.7	chr14	+	3984	40	FSM	ENSMUSG00000021843.18	ENSMUST00000190182.7	3984	40	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_36	179.666053725448	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTAGTTTTATAATA	2384	False	NA	108	True	AAAAAG	-20	NA	47901243	47973748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
ENSMUST00000190186.7	chr1	+	4492	17	FSM	ENSMUSG00000041757.18	ENSMUST00000190186.7	4492	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.50160830372701	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCGTCGTTGTCTCTCCT	NA	False	NA	NA	False	AAGAAA	-17	NA	133199954	133229225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_133200430_133201595_133202113_133202530_133202618_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215619_133220089_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ENSMUST00000190224.2	chr1	+	3666	1	FSM	ENSMUSG00000100455.2	ENSMUST00000190224.2	3666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGACTATTGTAAATCA	NA	False	NA	NA	False	AATAAA	-21	NA	143653379	143657045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_143653400_143657000
ENSMUST00000190226.7	chr9	-	3107	5	FSM	ENSMUSG00000032803.16	ENSMUST00000190226.7	3107	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	215.031974366604	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGGAATGTGATGCTT	NA	False	NA	-8	True	AATAAA	-14	NA	103242178	103230302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103241661
ENSMUST00000190240.7	chr1	+	2438	10	FSM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	31.2054126359159	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCCTGTCTGCCTGCT	NA	False	NA	11	True	AATAAA	-18	NA	75119437	75124553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75123364_75123474
ENSMUST00000190245.7	chr9	-	1693	10	FSM	ENSMUSG00000032298.14	ENSMUST00000190245.7	1693	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	6.09391520035648	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTGGTACTTCTTGG	NA	False	NA	-11	True	AATAAA	-5	NA	57055411	57050083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
ENSMUST00000190252.7	chr14	+	4436	41	FSM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_40	180.470106596633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACTCACTCTGATTG	NA	False	NA	17	True	AATAAA	-17	NA	47886767	47974014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ENSMUST00000190255.7	chr6	+	3431	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	30.3016088681773	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGTGCTTTAAGATCTT	-41	True	NA	8	True	ATTAAA	-16	NA	15720659	15802164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
ENSMUST00000190264.2	chr10	-	914	1	FSM	ENSMUSG00000096640.4	ENSMUST00000190264.2	914	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGGACCCAGAGGCTGGT	NA	False	NA	NA	False	NA	NA	NA	100218422	100217508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_100217500_100218400
ENSMUST00000190277.2	chr1	-	783	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCCCTTAGTATAATTAA	NA	False	NA	NA	False	NA	NA	NA	24653052	24652269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_24652300_24653100
ENSMUST00000190279.7	chr9	+	406	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	0	183	0	0	multi-exon	TRUE	canonical	3	1105	junction_1	209.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCCACTTGGTTTTCGT	NA	False	NA	17	True	AATAAA	-17	NA	102503494	102511441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102503546_102506961_102507088_102511212
ENSMUST00000190341.7	chr9	-	3331	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	22.0352222681815	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATGTGATTCATGAGA	-20	True	NA	-1	True	AATAAA	-21	NA	7837058	7818227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ENSMUST00000190348.2	chr1	+	6816	9	FSM	ENSMUSG00000025958.15	ENSMUST00000190348.2	1260	9	-62	-5494	0	-1577	multi-exon	FALSE	canonical	3	25	junction_4	27.9773904251272	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTCTCTTTTTTGGGC	NA	False	NA	10	True	CATAAA	-19	NA	64571990	64642130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ENSMUST00000190354.2	chr9	+	1216	1	FSM	ENSMUSG00000035048.14	ENSMUST00000190354.2	1216	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	102505710	102506926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_102505700_102506900
ENSMUST00000190378.2	chr3	-	3051	2	FSM	ENSMUSG00000049300.12	ENSMUST00000190378.2	3051	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTAACCTGGTCTAT	NA	False	NA	-8	True	AATAAA	-18	NA	110158309	110153427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_110155172_110157002
ENSMUST00000190387.7	chr9	+	2608	9	FSM	ENSMUSG00000040563.14	ENSMUST00000190387.7	2608	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	8.88467782195843	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTCTGCCTGCCT	1338	False	NA	NA	False	AATAAA	-19	NA	21849569	21860203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858349_21858676_21858729_21858899
ENSMUST00000190415.2	chr17	+	1964	3	FSM	ENSMUSG00000060149.8	ENSMUST00000190415.2	1964	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCAAGTGGCCTACTC	NA	False	NA	24	True	NA	NA	NA	17171800	17194419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17171971_17191432_17191494_17192686
ENSMUST00000190422.3	chr1	+	2633	1	FSM	ENSMUSG00000101523.3	ENSMUST00000190422.3	2633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGTTTTATTTATCAA	NA	False	NA	NA	False	AATAAA	-1	NA	156351581	156354214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_156351600_156354200
ENSMUST00000190436.7	chr15	+	2041	13	FSM	ENSMUSG00000078932.9	ENSMUST00000190436.7	2041	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_9	6.39172642301489	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCCAACTAGGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	91083696	91145097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91124845_91125023_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
ENSMUST00000190438.2	chr1	-	1312	1	FSM	ENSMUSG00000099492.2	ENSMUST00000190438.2	1312	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAAGTCTTGCCAGTCGC	NA	False	NA	NA	False	NA	NA	NA	29524996	29523684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_29523700_29525000
ENSMUST00000190457.2	chr8	-	1351	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	17	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTGCAAGCTATTTTC	7533	False	NA	-9	True	AATAAA	-22	NA	84738787	84736850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84737122_84737339_84737402_84737769
ENSMUST00000190462.2	chr13	-	1961	1	FSM	ENSMUSG00000014850.16	ENSMUST00000190462.2	1961	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAAAG	5301	False	NA	NA	False	NA	NA	NA	92445965	92444004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_92444000_92446000
ENSMUST00000190471.2	chr1	-	1226	1	FSM	ENSMUSG00000025930.7	ENSMUST00000190471.2	1226	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAGAAAACACTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	14826216	14824990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_14825000_14826200
ENSMUST00000190472.2	chr3	+	967	3	FSM	ENSMUSG00000036873.14	ENSMUST00000190472.2	724	3	-243	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	94.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGATGATCATGGAAATAA	NA	False	NA	-10	True	NA	NA	NA	145643796	145649997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145644084_145644652_145644852_145649516
ENSMUST00000190495.2	chr1	-	4355	16	FSM	ENSMUSG00000026355.12	ENSMUST00000190495.2	4355	16	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_5	205.687940552889	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTCTGTTGGATTCAT	NA	False	NA	-24	True	AATAAA	-14	NA	128287384	128259329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ENSMUST00000190496.2	chr17	+	1395	3	FSM	ENSMUSG00000034595.18	ENSMUST00000190496.2	1395	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCTGCCTTCCTTTGTT	NA	False	NA	13	True	AATAAA	-20	NA	36179294	36186486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_36179678_36184617_36184832_36185688
ENSMUST00000190511.2	chr9	+	798	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTACACTGAATTTTC	NA	False	NA	NA	False	AAAAAG	-33	NA	84306036	84306834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_84306000_84306800
ENSMUST00000190566.3	chr13	-	2406	4	FSM	ENSMUSG00000058883.17	ENSMUST00000190566.3	2406	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.78888096369861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCAGTGTCGTGTTTAGT	NA	False	NA	1	True	AATAAA	-20	NA	67229609	67217462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67219593_67222149_67222246_67222896_67222981_67229513
ENSMUST00000190588.2	chr12	+	4124	5	FSM	ENSMUSG00000034157.13	ENSMUST00000190588.2	573	5	-72	-3479	0	0	multi-exon	FALSE	canonical	1	1	junction_2	47.8767950055139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	86994191	87012136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_86994274_86999517_86999706_87006501_87006603_87007045_87007216_87008553
ENSMUST00000190591.10	chr15	+	4135	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATAAATTTAGAAT	6	True	NA	NA	False	NA	NA	NA	9071339	9110979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUST00000190591.10-0	chr15	+	3231	13	FSM	ENSMUSG00000022253.18	ENSMUST00000190591.10	4135	13	180	724	-135	307	multi-exon	FALSE	canonical	3	112	junction_7	89.5046553724069	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	87	False	NA	3	True	AATAAA	-23	NA	9071519	9110255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUST00000190602.2	chr3	-	1026	3	FSM	ENSMUSG00000099370.2	ENSMUST00000190602.2	1026	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	94	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCTCATGGTCATGGTG	NA	False	NA	-5	True	NA	NA	NA	75563038	75554752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_75555246_75556106_75556298_75562696
ENSMUST00000190637.7	chr9	+	1477	11	FSM	ENSMUSG00000032263.15	ENSMUST00000190637.7	1477	11	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	45.3898667105335	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	83807197	84006292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ENSMUST00000190641.7	chr6	+	5303	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_2	0.5	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTTGTCGTCTTTACTC	NA	False	NA	7	True	ATTAAA	-19	NA	54658608	54680836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_54658917_54665990_54666114_54675964
ENSMUST00000190647.3	chr12	-	2707	7	FSM	ENSMUSG00000040867.14	ENSMUST00000190647.3	2707	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.3870669054836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCCCAGGTTTGCATT	NA	False	NA	-6	True	AATAAA	-13	NA	109034143	108998112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_109000278_109001253_109001338_109002921_109003030_109003578_109003646_109004777_109004940_109018759_109018789_109034051
ENSMUST00000190679.7	chr1	-	2062	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	12.6426553656215	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCTTTTCCTTCTGT	6906	False	NA	-13	True	AATAAA	-17	NA	75118335	75112411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
ENSMUST00000190686.7	chr17	+	8864	15	FSM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	24.3951316655515	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGTCTGTAGTCTT	NA	False	NA	11	True	AATAAA	-13	NA	24022160	24043710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ENSMUST00000190687.2	chr17	-	3145	1	FSM	ENSMUSG00000047407.18	ENSMUST00000190687.2	3145	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAGAGAAAAAAGCATA	NA	False	NA	NA	False	TATAAA	-38	NA	71156809	71153664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71153700_71156800
ENSMUST00000190693.2	chr7	+	1541	1	FSM	ENSMUSG00000090330.3	ENSMUST00000190693.2	1541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACTGCCTCCCTGGAT	9309	False	NA	7	True	TATAAA	-17	NA	24928147	24929688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24928100_24929700
ENSMUST00000190715.7	chr9	+	1768	6	FSM	ENSMUSG00000056267.15	ENSMUST00000190715.7	1768	6	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	56.4361586219332	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTCTTGGTCATCAT	NA	False	NA	7	True	NA	NA	NA	99125513	99146981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681
ENSMUST00000190729.2	chr13	+	1184	3	FSM	ENSMUSG00000078941.10	ENSMUST00000190729.2	1184	3	0	0	0	0	multi-exon	FALSE	canonical	3	1279	junction_2	251.5	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGTACTTTGGCAG	NA	False	NA	NA	False	AATAAA	-19	NA	100787887	100792566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_100787954_100790698_100790792_100791541
ENSMUST00000190734.2	chr1	+	785	5	FSM	ENSMUSG00000100679.2	ENSMUST00000190734.2	785	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.9370739763817	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCCCTAAGCTTGGGA	NA	False	NA	NA	False	NA	NA	NA	53336269	53357194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53354018_53354259_53357060
ENSMUST00000190776.2	chr16	+	930	2	FSM	ENSMUSG00000071632.11	ENSMUST00000190776.2	930	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGTGGCCCACGCCTT	NA	False	NA	63	True	NA	NA	NA	18655404	18658550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18655624_18657839
ENSMUST00000190825.7	chr1	+	2456	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190825.7	2456	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	97.6599583023734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTTTTATCCATCTCCA	NA	False	NA	NA	False	NA	NA	NA	132405102	132432228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431504
ENSMUST00000190840.8	chr8	-	8663	27	FSM	ENSMUSG00000031561.17	ENSMUST00000190840.8	8663	27	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_26	19.7006067248053	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGGATTTAATAATGGAT	NA	False	NA	NA	False	NA	NA	NA	49127719	48680960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49099292_49099572_49127444
ENSMUST00000190930.2	chr2	+	567	1	FSM	ENSMUSG00000099632.2	ENSMUST00000190930.2	567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCAGTCTCTGGCTTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	163261714	163262281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_163261700_163262300
ENSMUST00000190993.7	chr11	-	1326	5	FSM	ENSMUSG00000034120.19	ENSMUST00000190993.7	1326	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	732.164428253654	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATCAAAATGTT	6025	False	NA	NA	False	NA	NA	NA	116743898	116740879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_116741180_116741681_116741788_116742473_116742578_116742846_116743158_116743393
ENSMUST00000190997.7	chr1	+	2856	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_13	83.2346081867393	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTACAATAAGTGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	132405104	132432627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ENSMUST00000191097.2	chr10	+	665	2	FSM	ENSMUSG00000020180.11	ENSMUST00000191097.2	665	2	0	0	0	0	multi-exon	FALSE	canonical	3	3739	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACTTGTCTATAAAACAA	1865	False	NA	NA	False	AATACA	-8	NA	75353847	75355700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75353960_75355147
ENSMUST00000191104.7	chr1	-	9904	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_32	13.8921276605673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGCCTGGCTTCGTT	NA	False	NA	-3	True	TATAAA	-22	NA	74163608	73949390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
ENSMUST00000191104.7-0	chr1	-	6286	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	-61	3679	-61	0	multi-exon	FALSE	canonical	3	25	junction_32	13.8921276605673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	NA	False	NA	-4	True	NA	NA	NA	74163669	73953069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
ENSMUST00000191135.2	chr5	-	1923	2	FSM	ENSMUSG00000072774.11	ENSMUST00000191135.2	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTAAATGTTTGTTTCC	NA	False	NA	NA	False	AATAAA	-11	NA	105007659	104983585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_104985382_105007532
ENSMUST00000191142.7	chr1	+	1979	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	-6	7534	0	0	multi-exon	FALSE	canonical	3	1434	junction_3	210.570471503931	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724161	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUST00000191150.2	chr1	+	874	2	FSM	ENSMUSG00000026319.14	ENSMUST00000191150.2	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGTCTGCTTCATAGA	NA	False	NA	11	True	AATAAA	-13	NA	105591661	105592875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_105592359_105592698
ENSMUST00000191192.2	chr7	-	570	3	FSM	ENSMUSG00000030717.10	ENSMUST00000191192.2	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCAACAATAAATCGTAC	NA	False	NA	-37	True	AATAAA	-18	NA	126224516	126222449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126222752_126224061_126224308_126224494
ENSMUST00000191212.7	chr1	-	6981	10	FSM	ENSMUSG00000054387.14	ENSMUST00000191212.7	2799	10	0	-4182	0	0	multi-exon	FALSE	canonical	3	144	junction_5	107.251521615728	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953095	132913957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940453_132946514_132946623_132952985
ENSMUST00000191213.7	chr9	-	3231	27	FSM	ENSMUSG00000032407.15	ENSMUST00000191213.7	3231	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	230.683894478131	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGGTTTTTTTTTTC	8192	False	NA	NA	False	NA	NA	NA	95394048	95343406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ENSMUST00000191237.7	chr1	-	1689	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTCATGGAAGAACGTT	NA	False	NA	67	True	NA	NA	NA	134289679	134275419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUST00000191237.7-0	chr1	-	3312	9	FSM	ENSMUSG00000042305.13	ENSMUST00000191237.7	1689	9	-38	-1585	0	0	multi-exon	FALSE	canonical	0	0	junction_2	283.900923519104	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289717	134273834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUST00000191269.2	chr9	+	3098	5	FSM	ENSMUSG00000032409.16	ENSMUST00000191269.2	3098	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	7.39509972887452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATATAAGAAGAAACCT	NA	False	NA	NA	False	TATAAA	-38	NA	95739721	95751957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95749739_95751934
ENSMUST00000191273.7	chr4	-	1348	7	FSM	ENSMUSG00000028416.14	ENSMUST00000191273.7	1348	7	0	0	0	0	multi-exon	FALSE	canonical	3	1821	junction_3	173.811599791907	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCTCTGTGGTGGTG	15	False	40948309	-7	True	AAAAAG	-39	NA	40948294	40936398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUST00000191296.2	chr1	-	666	1	FSM	ENSMUSG00000025917.10	ENSMUST00000191296.2	666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAATCC	NA	False	NA	NA	False	TATAAA	-23	NA	10108170	10107504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10107500_10108200
ENSMUST00000191304.7	chr13	-	1796	9	FSM	ENSMUSG00000014850.16	ENSMUST00000191304.7	1796	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	12.6589889011722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGCATGGCGTATTG	NA	False	NA	NA	False	AATAAA	-19	NA	92402580	92348388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434
ENSMUST00000191307.7	chr1	-	5627	7	FSM	ENSMUSG00000037503.13	ENSMUST00000191307.7	844	7	0	-4783	0	0	multi-exon	FALSE	canonical	0	0	junction_3	218.505275807143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGACCTTTTCGTGGG	NA	False	NA	-7	True	AATAAA	-18	NA	34882115	34852306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_34857208_34858672_34858851_34858947_34859091_34863100_34863137_34867847_34867929_34875813_34875895_34881908
ENSMUST00000191329.2	chr1	-	2939	3	FSM	ENSMUSG00000048874.16	ENSMUST00000191329.2	2939	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTCCTTAATTGGTA	NA	False	NA	-12	True	AATAAA	-16	NA	30849793	30842626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30845446_30847803_30847894_30849763
ENSMUST00000191335.7	chr9	+	2120	16	FSM	ENSMUSG00000056267.15	ENSMUST00000191335.7	2120	16	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_10	76.0584570504089	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTGAGTTGGATTATA	NA	False	NA	NA	False	ATTAAA	-13	NA	99125515	99180038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631
ENSMUST00000191368.7	chr1	+	1110	10	FSM	ENSMUSG00000034343.15	ENSMUST00000191368.7	1110	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	94.7511360236793	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATGCACACTCTCTTA	365	False	NA	NA	False	TATAAA	-6	NA	91178086	91213495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_91178160_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUST00000191436.7	chr15	+	1122	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	144.768781165001	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8387	False	NA	27	True	AATAAA	-15	NA	74827501	74831180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
ENSMUST00000191439.2	chr15	+	815	1	FSM	ENSMUSG00000022587.15	ENSMUST00000191439.2	815	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAAAAC	8417	False	NA	NA	False	NA	NA	NA	74827531	74828346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_74827500_74828300
ENSMUST00000191446.7	chr14	+	4021	40	FSM	ENSMUSG00000021843.18	ENSMUST00000191446.7	4021	40	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_39	186.457638671808	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAGTTTAGTTTTAT	2384	False	NA	104	True	AAAAAG	-16	NA	47901243	47973744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973558
ENSMUST00000191471.7	chr1	+	4453	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGACTAATGAACAGCTT	NA	False	NA	NA	False	CATAAA	-22	NA	24717710	24804529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUST00000191471.7-0	chr1	+	1926	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	109	2418	0	637	multi-exon	FALSE	canonical	3	113	junction_9	21.4185796810983	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTCCCTTTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	24717819	24802111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUST00000191473.7	chr8	-	2547	9	FSM	ENSMUSG00000031586.18	ENSMUST00000191473.7	2547	9	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	473.977962963469	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGATTTGTCTGACAACT	NA	False	NA	NA	False	AATAAA	-18	NA	34419869	34272671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUST00000191479.2	chr3	-	818	1	FSM	ENSMUSG00000099370.2	ENSMUST00000191479.2	818	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTGCCAAACAGCCT	967	False	NA	NA	False	AAGAAA	-15	NA	75555964	75555146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_75555100_75556000
ENSMUST00000191485.7	chr3	+	3154	13	FSM	ENSMUSG00000042626.14	ENSMUST00000191485.7	3154	13	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	89.6222008705928	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	NA	False	NA	32	True	ATTAAA	-29	NA	89325857	89337334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUST00000191510.7	chr1	+	2593	7	FSM	ENSMUSG00000034432.12	ENSMUST00000191510.7	2593	7	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_6	25.9293913027925	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCTCTAGAAATTT	NA	False	NA	25	True	AATAAA	-30	NA	90531197	90540846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_90531350_90532096_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ENSMUST00000191511.7	chr14	+	3962	39	FSM	ENSMUSG00000021843.18	ENSMUST00000191511.7	3962	39	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_38	189.0123550462	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTTAGTTTTATAATA	2384	False	NA	108	True	AAAAAG	-20	NA	47901243	47973748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ENSMUST00000191598.3	chr17	+	645	3	FSM	ENSMUSG00000024038.18	ENSMUST00000191598.3	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1845	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTCTGTGGCTTTGAG	NA	False	NA	NA	False	NA	NA	NA	31739158	31746219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31739236_31740542_31740667_31745775
ENSMUST00000191601.7	chr7	-	2690	15	FSM	ENSMUSG00000037032.17	ENSMUST00000191601.7	2690	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	54.3741760434874	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230485	105207690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215152_105215159_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ENSMUST00000191689.6	chr1	+	2754	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTCTCTATGAATCCA	NA	False	NA	56	True	TTTAAA	-6	NA	171975684	172023074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000191689.6-0	chr1	+	3636	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	0	-882	0	0	multi-exon	FALSE	canonical	3	418	junction_1	55.9704063816991	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTATGTG	NA	False	NA	16	True	AGTAAA	-16	NA	171975684	172023956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000191699.2	chr1	-	381	1	FSM	ENSMUSG00000102824.2	ENSMUST00000191699.2	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACGCGCTTAGACAGAC	NA	False	NA	NA	False	AAGAAA	-38	NA	189010020	189009639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_189009600_189010000
ENSMUST00000191728.2	chr1	-	1502	4	FSM	ENSMUSG00000026516.9	ENSMUST00000191728.2	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_2	34.5864456430872	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	180932711	180923546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_180924790_180926691_180926769_180929093_180929201_180932636
ENSMUST00000191752.6	chr3	-	8042	14	FSM	ENSMUSG00000028078.15	ENSMUST00000191752.6	8042	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	78.2584853708809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGGTGGGTGAAATTTC	NA	False	NA	-1	True	AATAAA	-22	NA	86827686	86693457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ENSMUST00000191758.6	chr3	-	4987	35	FSM	ENSMUSG00000033767.15	ENSMUST00000191758.6	5555	35	14	554	0	0	multi-exon	FALSE	canonical	3	49	junction_6	12.592082974362	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	False	NA	-26	True	AATAAA	-14	NA	83947468	83805515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ENSMUST00000191774.6	chr3	+	3196	6	FSM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	175.937943605125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATGTTTTATTGAT	NA	False	NA	5	True	ATTAAA	-17	NA	16237399	16269170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ENSMUST00000191774.6-0	chr3	+	5227	6	FSM	ENSMUSG00000047213.15	ENSMUST00000191774.6	3196	6	0	-2031	0	0	multi-exon	FALSE	canonical	3	57	junction_2	175.937943605125	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237399	16271201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257989_16259589_16268118
ENSMUST00000191783.6	chr3	+	1988	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	46.6455309280059	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3182	False	NA	22	True	AATAAA	-22	NA	32564683	32574892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ENSMUST00000191790.6	chr1	+	757	2	FSM	ENSMUSG00000061518.12	ENSMUST00000191790.6	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	7223	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCACTTTGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	36730708	36731631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36731366_36731531
ENSMUST00000191805.7	chr3	+	1705	10	FSM	ENSMUSG00000025762.17	ENSMUST00000191805.7	1705	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	8.10273540155757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTTTTTAAGGGCTT	NA	False	NA	13	True	AATAAA	-26	NA	40905065	40932228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ENSMUST00000191839.2	chr1	+	540	3	FSM	ENSMUSG00000104011.2	ENSMUST00000191839.2	540	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTCTTTCTTTTCTC	NA	False	NA	NA	False	AAAACA	-41	NA	164290010	164291558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_164290168_164290325_164290407_164291256
ENSMUST00000191844.2	chr1	-	1369	1	FSM	ENSMUSG00000104496.2	ENSMUST00000191844.2	1369	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGGGATGGAGGCGCAC	1360	False	NA	NA	False	NA	NA	NA	139857346	139855977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_139856000_139857300
ENSMUST00000191852.2	chr1	-	1487	1	FSM	ENSMUSG00000102478.2	ENSMUST00000191852.2	1487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAAAAGGGGGGTATA	NA	False	NA	NA	False	NA	NA	NA	182988121	182986634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182986600_182988100
ENSMUST00000191860.2	chr5	+	3151	5	FSM	ENSMUSG00000102644.6	ENSMUST00000191860.2	3151	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9.73075022801428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	92111191	92119925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_92111382_92111541_92111645_92112954_92113164_92114310_92114434_92117399
ENSMUST00000191896.6	chr1	-	4396	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_16	96.2094744595279	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTATCATTATAACTCA	NA	False	NA	1	True	AATAAA	-21	NA	133589056	133547599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ENSMUST00000191899.6	chr9	-	5430	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	0	232	0	-232	multi-exon	FALSE	canonical	3	259	junction_3	109.352640571684	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141157	108082064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
ENSMUST00000191939.2	chr1	-	1784	2	FSM	ENSMUSG00000025902.14	ENSMUST00000191939.2	840	2	131	-1075	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATCTCTCGCATCGA	NA	False	NA	NA	False	AATAAA	-13	NA	4563827	4561612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_4562892_4563322
ENSMUST00000191947.6	chr1	+	1635	13	FSM	ENSMUSG00000026575.16	ENSMUST00000191947.6	1635	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	28.2090411038731	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	164135641	164264863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUST00000191983.2	chr12	+	2252	1	FSM	ENSMUSG00000037957.15	ENSMUST00000191983.2	2252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCAAACCA	5343	False	NA	NA	False	NA	NA	NA	110704422	110706674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110704400_110706700
ENSMUST00000191997.2	chr9	+	787	2	FSM	ENSMUSG00000063856.9	ENSMUST00000191997.2	787	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	2270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGATGGGCGCTGGTCCC	NA	False	NA	-75	True	NA	NA	NA	108216441	108217449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108216758_108216978
ENSMUST00000192001.6	chr1	-	6329	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	9.18197112552637	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCAGACACCAATTTTT	7156	False	NA	0	True	ATTAAA	-22	NA	136273436	136196897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ENSMUST00000192045.2	chr3	+	490	1	FSM	ENSMUSG00000103034.2	ENSMUST00000192045.2	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGCACAGAGCTTAACAA	NA	False	NA	NA	False	AATAAA	-33	NA	5815865	5816355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_5815900_5816400
ENSMUST00000192057.6	chr3	+	3119	12	FSM	ENSMUSG00000001415.11	ENSMUST00000192057.6	3119	12	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	17.1507655902172	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAATTTTAAGTATAGT	NA	False	NA	NA	False	NA	NA	NA	88243617	88260036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285
ENSMUST00000192075.2	chr1	-	2715	5	FSM	ENSMUSG00000004880.12	ENSMUST00000192075.2	2715	5	0	0	0	0	multi-exon	FALSE	canonical	3	1997	junction_2	109.810063291121	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAAAGTTGAAAATAA	NA	False	NA	29	True	AATAAA	-12	NA	181648107	181642920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428
ENSMUST00000192076.3	chr1	+	2384	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	9.96042167782067	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170324	183191020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ENSMUST00000192088.2	chr1	-	319	1	FSM	ENSMUSG00000103013.2	ENSMUST00000192088.2	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGTCAGTGAGGGAACA	NA	False	NA	NA	False	NA	NA	NA	74327019	74326700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_74326700_74327000
ENSMUST00000192095.6	chr3	-	4774	34	FSM	ENSMUSG00000033767.15	ENSMUST00000192095.6	4774	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	22.9510198312573	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	False	NA	-26	True	AATAAA	-14	NA	83947444	83805515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_83805921_83806483_83806624_83807633_83807723_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829867_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ENSMUST00000192155.6	chr13	-	7002	24	FSM	ENSMUSG00000021466.13	ENSMUST00000192155.6	7002	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_23	22.4059470906355	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTATGTGCTTGTTTC	NA	False	NA	-8	True	AATAAA	-15	NA	63712349	63656149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_63658927_63659345_63659890_63661374_63661630_63662055_63662156_63665925_63666069_63668082_63668221_63670813_63671095_63672758_63672943_63674960_63675104_63680350_63680661_63681077_63681481_63682103_63682223_63687046_63687173_63687627_63687727_63688495_63688652_63688970_63689103_63689978_63690127_63690897_63691020_63691303_63691503_63692849_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63712271
ENSMUST00000192167.2	chr2	-	1682	1	FSM	ENSMUSG00000103285.2	ENSMUST00000192167.2	1682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	1989	False	NA	NA	False	AATAAA	-17	NA	155928211	155926529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_155926500_155928200
ENSMUST00000192174.6	chr5	+	3491	4	FSM	ENSMUSG00000102644.6	ENSMUST00000192174.6	1996	4	-14	-1481	0	0	multi-exon	TRUE	canonical	3	9	junction_1	7.48331477354788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	92110748	92119925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_92111382_92112954_92113164_92114310_92114434_92117399
ENSMUST00000192185.6	chr1	-	5332	7	FSM	ENSMUSG00000040848.12	ENSMUST00000192185.6	3798	7	0	-1534	0	0	multi-exon	FALSE	canonical	1	2	junction_5	27.3780122645081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTGTCTCTTACTC	NA	False	NA	NA	False	AATAAA	-26	NA	165021890	165001905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015816_165015904_165021808
ENSMUST00000192226.6-1	chr9	+	1299	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192226.6	607	4	-43	-649	0	0	multi-exon	FALSE	canonical	3	46	junction_3	30.6847772609735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGTAGTTCTTTGG	NA	False	NA	NA	False	AATAAA	-21	NA	108661020	108675193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108661070_108673262_108673596_108673853_108673983_108674405
ENSMUST00000192234.2	chr1	+	713	1	FSM	ENSMUSG00000102762.2	ENSMUST00000192234.2	713	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTACTGTACAGTTCTAT	NA	False	NA	NA	False	NA	NA	NA	36371788	36372501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36371800_36372500
ENSMUST00000192284.6	chr1	+	5638	20	FSM	ENSMUSG00000026615.15	ENSMUST00000192284.6	5638	20	0	0	0	0	multi-exon	FALSE	canonical	3	1945	junction_14	246.149122650716	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGAAAATCTTG	NA	False	NA	NA	False	NA	NA	NA	185095240	185142396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687
ENSMUST00000192288.2	chr17	+	443	2	FSM	ENSMUSG00000062691.11	ENSMUST00000192288.2	443	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTCTGTTTAAAAAGAT	NA	False	NA	NA	False	TTTAAA	-40	NA	79224128	79225867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79224490_79225785
ENSMUST00000192307.6	chr9	+	1191	3	FSM	ENSMUSG00000032599.13	ENSMUST00000192307.6	1191	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	47	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTCTTGTAGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	108660994	108675188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108661070_108673262_108673596_108674405
ENSMUST00000192307.6-0	chr9	+	869	3	FSM	ENSMUSG00000032599.13	ENSMUST00000192307.6	1191	3	26	296	0	0	multi-exon	FALSE	canonical	3	25	junction_2	47	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGCTCACCCACCATG	NA	False	NA	9	True	AATAAA	-23	NA	108661020	108674892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108661070_108673262_108673596_108674405
ENSMUST00000192318.2	chr9	+	3253	10	FSM	ENSMUSG00000032936.14	ENSMUST00000192318.2	3253	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	6.48264539813992	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTCTGGCCACCCTCT	NA	False	NA	4	True	AATAAA	-12	NA	107813096	107826876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823660_107823816_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
ENSMUST00000192343.6	chr1	-	2337	20	FSM	ENSMUSG00000026594.15	ENSMUST00000192343.6	4398	20	-9	2070	0	0	multi-exon	FALSE	canonical	3	20	junction_15	76.9001222942088	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTAACTTTGTACT	NA	False	NA	-6	True	AATAAA	-16	NA	156767178	156636399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUST00000192365.2	chr3	-	802	6	FSM	ENSMUSG00000028066.16	ENSMUST00000192365.2	802	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	418.733614604799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCCACCCTGGCATCAG	NA	False	NA	NA	False	NA	NA	NA	88317572	88301685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88301878_88303020_88303118_88303211_88303408_88306441_88306543_88307017_88307124_88317462
ENSMUST00000192369.6	chr1	-	4045	6	FSM	ENSMUSG00000026564.10	ENSMUST00000192369.6	4045	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	17.4768418199628	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCATTCTGGTCATTT	NA	False	NA	-1	True	ATTAAA	-19	NA	165955491	165925716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954769_165955360
ENSMUST00000192388.2	chr9	-	1875	1	FSM	ENSMUSG00000102204.2	ENSMUST00000192388.2	1875	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	102643708	102641833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_102641800_102643700
ENSMUST00000192413.2	chr2	-	1943	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTTGTGAGGAAATTG	NA	False	NA	NA	False	ATTAAA	-15	NA	129041114	129039171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_129039200_129041100
ENSMUST00000192462.6	chr3	+	2505	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	25.4447931805311	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTGTCTGTCTCGTG	NA	False	NA	16	True	AGTAAA	-16	NA	154302347	154328817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUST00000192491.6	chr1	-	1623	10	FSM	ENSMUSG00000037395.17	ENSMUST00000192491.6	1623	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	11.5373788665845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTTTTTTGTTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	191822323	191785683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ENSMUST00000192509.6	chr1	+	3918	31	FSM	ENSMUSG00000026074.16	ENSMUST00000192509.6	3918	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	29.3285791601904	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATCAAGGCTGCATT	NA	False	NA	-16	True	NA	NA	NA	39940389	40064085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40047490_40047500_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUST00000192538.2	chr3	-	1392	1	FSM	ENSMUSG00000042165.9	ENSMUST00000192538.2	1392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1730	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTGTTCCAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	92336730	92335338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_92335300_92336700
ENSMUST00000192561.6	chr1	+	3160	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	15.1320716307033	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468714	180518252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ENSMUST00000192584.2	chr9	-	2525	14	FSM	ENSMUSG00000039542.17	ENSMUST00000192584.2	2525	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45.8701537594672	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGGTGACGAAATAATTA	8684	False	NA	NA	False	AATAAA	-22	NA	49710058	49442575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_49443274_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
ENSMUST00000192615.6	chr9	-	1777	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	364.681860496241	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4825	False	NA	0	True	AATAAA	-24	NA	107512511	107491323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ENSMUST00000192632.2	chr3	+	1110	1	FSM	ENSMUSG00000104303.2	ENSMUST00000192632.2	1110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAATTGTGAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	43501607	43502717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_43501600_43502700
ENSMUST00000192635.2	chr19	-	1748	1	FSM	ENSMUSG00000102353.2	ENSMUST00000192635.2	1748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTATTTCTAAGTCCAT	NA	False	NA	NA	False	AGTAAA	-2	NA	37423104	37421356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_37421400_37423100
ENSMUST00000192639.6	chr1	-	1294	4	FSM	ENSMUSG00000026701.16	ENSMUST00000192639.6	1294	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	831.771736849854	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCGTTGTCATGTTT	NA	False	NA	-11	True	AATAAA	-10	NA	161078756	161068584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161078591
ENSMUST00000192666.2	chr1	-	3666	9	FSM	ENSMUSG00000066595.10	ENSMUST00000192666.2	3666	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	11.3571288184999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATATGTCCTTTAAA	NA	False	NA	-1	True	AATAAA	-18	NA	190758164	190738045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190757573
ENSMUST00000192698.3	chr1	+	1811	13	FSM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	140.296783640966	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATAATTAAAGGATTCT	NA	False	NA	-12	True	NA	NA	NA	5153376	5232642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUST00000192704.6	chr1	+	2859	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTATCAAGTTAAAATTA	NA	False	NA	15	True	ATTAAA	-17	NA	171975708	172023033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000192704.6-0	chr1	+	3746	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	36	-923	0	0	multi-exon	FALSE	canonical	3	161	junction_1	115.931269170995	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTATGTG	NA	False	NA	16	True	AGTAAA	-16	NA	171975744	172023956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUST00000192715.6	chr3	+	5555	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCACTCACTATTTTGAC	8213	False	NA	NA	False	AATAAA	-16	NA	30656213	30674022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUST00000192715.6-0	chr3	+	3609	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	574	1372	0	0	multi-exon	FALSE	canonical	3	110	junction_2	33.260873624812	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8787	False	NA	NA	False	AATAAA	-35	NA	30656787	30672650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUST00000192716.2	chr1	-	658	2	FSM	ENSMUSG00000026566.16	ENSMUST00000192716.2	658	2	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCCAGTACTTGGGAAA	NA	False	NA	NA	False	NA	NA	NA	165433322	165431798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165432312_165433177
ENSMUST00000192727.6	chr9	-	2383	18	FSM	ENSMUSG00000034684.13	ENSMUST00000192727.6	2383	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	4.95725674780597	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCTGCATAGGACCAG	NA	False	NA	NA	False	NA	NA	NA	107582755	107559616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629
ENSMUST00000192768.2	chr1	-	1890	1	FSM	ENSMUSG00000022995.17	ENSMUST00000192768.2	1890	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	181740162	181738272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181738300_181740200
ENSMUST00000192775.2	chr1	-	879	2	FSM	ENSMUSG00000102976.7	ENSMUST00000192775.2	879	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACTATTTTTATATTGA	NA	False	NA	NA	False	NA	NA	NA	133589118	133582401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_133583137_133588974
ENSMUST00000192791.3	chr5	+	1935	1	FSM	ENSMUSG00000104156.3	ENSMUST00000192791.3	1935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAGTCCTTGCTCTAG	74	False	NA	NA	False	CATAAA	-19	NA	123273823	123275758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123273800_123275800
ENSMUST00000192819.2	chr9	+	721	3	FSM	ENSMUSG00000006673.15	ENSMUST00000192819.2	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	40	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCAGCCACAGCAGGTT	1683	False	NA	NA	False	NA	NA	NA	108394821	108406094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108395176_108395965_108396026_108405787
ENSMUST00000192863.3	chr2	-	4915	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192863.3	4915	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGGCGTCTCTACTGC	NA	False	NA	NA	False	AATAAA	-17	NA	156234899	156229984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156230000_156234900
ENSMUST00000192866.6	chr1	-	3808	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	52	-2016	0	0	multi-exon	FALSE	canonical	3	28	junction_1	6.62077871128477	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTTCTATTTTTAT	NA	False	NA	-1	True	ATTAAA	-13	NA	191822307	191783070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ENSMUST00000192886.6	chr9	-	1578	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	212	-696	0	0	multi-exon	TRUE	canonical	3	19	junction_2	5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTGTGGTTATTCAA	7327	False	NA	-2	True	ATTAAA	-13	NA	108183147	108180156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108181453_108182524_108182580_108182920
ENSMUST00000192929.6	chr1	-	1756	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCACCCCTGGAAGCTT	NA	False	NA	NA	False	NA	NA	NA	136881368	136773200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ENSMUST00000192929.6-0	chr1	-	3125	9	FSM	ENSMUSG00000026398.15	ENSMUST00000192929.6	1756	9	0	-1369	0	182	multi-exon	FALSE	canonical	3	24	junction_8	13.3041346956501	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATAGTGTTTACATT	NA	False	NA	NA	False	AATAAA	-24	NA	136881368	136771831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136881231
ENSMUST00000192959.2	chr3	-	686	2	FSM	ENSMUSG00000053870.8	ENSMUST00000192959.2	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGAATTCAACTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	154799005	154796579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_154797196_154798935
ENSMUST00000192993.2	chr1	+	1628	1	FSM	ENSMUSG00000104498.2	ENSMUST00000192993.2	1628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	32524395	32526023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_32524400_32526000
ENSMUST00000193035.2	chr9	-	838	1	FSM	ENSMUSG00000103968.2	ENSMUST00000193035.2	838	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCACAGAAAAGCTGCATT	NA	False	NA	NA	False	AATAAA	-25	NA	118232370	118231532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_118231500_118232400
ENSMUST00000193053.6	chr12	+	1351	3	FSM	ENSMUSG00000037957.15	ENSMUST00000193053.6	1351	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	64	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTTTATCCTTTTT	5298	False	NA	NA	False	ATTAAA	-15	NA	110704377	110770672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110704712_110745729_110745913_110769838
ENSMUST00000193069.2	chr3	+	495	5	FSM	ENSMUSG00000041355.14	ENSMUST00000193069.2	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	7.53325958665968	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGAGGGACCTGACCC	NA	False	NA	NA	False	NA	NA	NA	88483245	88487290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88483288_88483545_88483689_88483806_88483911_88484401_88484504_88487186
ENSMUST00000193073.2	chr1	+	944	3	FSM	ENSMUSG00000026078.11	ENSMUST00000193073.2	944	3	0	0	0	0	multi-exon	FALSE	canonical	3	894	junction_1	18	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACAGTGCAAAAAATGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	39034240	39035727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39034470_39034815_39035025_39035221
ENSMUST00000193091.2	chr1	+	600	4	FSM	ENSMUSG00000026687.15	ENSMUST00000193091.2	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_2	33.0689515339624	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGTCAGATCTCTGAGG	NA	False	NA	NA	False	NA	NA	NA	167177880	167183459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240
ENSMUST00000193168.2	chr3	+	552	4	FSM	ENSMUSG00000039221.11	ENSMUST00000193168.2	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	3246.42750659175	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	17	True	AATAAA	-22	NA	28859658	28861571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_28859693_28860648_28860742_28860818_28861008_28861335
ENSMUST00000193190.6	chr9	-	2160	15	FSM	ENSMUSG00000064145.13	ENSMUST00000193190.6	2160	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	244.802388026901	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCACCCTTTAGCTA	NA	False	NA	-24	True	AATAAA	-11	NA	108526584	108481884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
ENSMUST00000193210.6	chr1	+	865	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCTAAAAATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	36730564	36732762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ENSMUST00000193210.6-0	chr1	+	515	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	55	295	55	0	multi-exon	FALSE	canonical	3	7132	junction_3	70.6588045940962	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGGCTAGTCTTATGTC	NA	False	NA	23	True	AATAAA	-28	NA	36730619	36732467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ENSMUST00000193241.2	chr1	+	2279	1	FSM	ENSMUSG00000104046.2	ENSMUST00000193241.2	2279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCCTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	5377961	5380240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_5378000_5380200
ENSMUST00000193254.6	chr9	-	2518	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_21	23.0064567492301	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGTGCTGGTACTT	NA	False	NA	-32	True	AATAAA	-14	NA	107971805	107962611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ENSMUST00000193287.6	chr3	+	2211	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	65.8012580089131	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTCATAGTTACCACT	2906	False	NA	112	True	AATATA	-32	NA	32564407	32574982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ENSMUST00000193321.2	chr3	+	3817	1	FSM	ENSMUSG00000104377.2	ENSMUST00000193321.2	3817	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCCCAGAAACTTAGGAT	NA	False	NA	NA	False	NA	NA	NA	155610145	155613962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_155610100_155614000
ENSMUST00000193338.6	chr3	-	795	3	FSM	ENSMUSG00000028066.16	ENSMUST00000193338.6	795	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATCTGTGAGGAGGTTT	NA	False	NA	-6	True	AATAAA	-16	NA	88317633	88301449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88301878_88303211_88303408_88317462
ENSMUST00000193359.6	chr1	+	1894	8	FSM	ENSMUSG00000042901.11	ENSMUST00000193359.6	1894	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	48.8755186829829	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGATGGATGGTTGTTAC	NA	False	NA	NA	False	AATAAA	-12	NA	183087225	183104463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ENSMUST00000193404.2	chr18	+	2254	4	FSM	ENSMUSG00000102222.2	ENSMUST00000193404.2	4732	4	2478	0	2478	0	multi-exon	FALSE	canonical	0	0	junction_1	104.703815063678	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	7975	False	NA	17	True	AATAAA	-20	NA	37882523	37974926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_37882659_37958073_37958133_37966317_37966407_37972955
ENSMUST00000193411.2	chr3	+	1725	2	FSM	ENSMUSG00000027694.10	ENSMUST00000193411.2	182	2	0	-1543	0	1270	multi-exon	FALSE	canonical	3	1840	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGACTACTTCTTCTT	NA	False	NA	NA	False	AATAAA	-35	NA	60784434	60786278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_60784468_60784586
ENSMUST00000193433.6	chr3	-	3429	4	FSM	ENSMUSG00000050144.14	ENSMUST00000193433.6	3429	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.7672653471886	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGGCTTTTGGGTTT	4097	False	NA	-3	True	ATTAAA	-19	NA	88332415	88317804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332152
ENSMUST00000193517.6	chr3	+	5151	9	FSM	ENSMUSG00000027763.14	ENSMUST00000193517.6	5151	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	29.77388746872	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGTGCCTGAGATTG	NA	False	NA	26	True	AATAAA	-38	NA	60436451	60537169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ENSMUST00000193547.6	chr9	-	6050	18	FSM	ENSMUSG00000039542.17	ENSMUST00000193547.6	6050	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	42.8863469454471	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTAGTCCAACTGGGCT	8517	False	NA	-1	True	AATAAA	-22	NA	49710225	49413435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
ENSMUST00000193563.2	chr9	+	129	1	FSM	ENSMUSG00000104268.2	ENSMUST00000193563.2	129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTACATATAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	103930525	103930654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_103930500_103930700
ENSMUST00000193634.2	chr9	+	2820	2	FSM	ENSMUSG00000032599.13	ENSMUST00000193634.2	2820	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAGTGTAAATTATGT	NA	False	NA	NA	False	NA	NA	NA	108661020	108676033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108661070_108673262
ENSMUST00000193658.2	chr1	+	1069	1	FSM	ENSMUSG00000103922.2	ENSMUST00000193658.2	1069	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGGACTTTGAATGTAAAG	NA	False	NA	NA	False	NA	NA	NA	4841353	4842422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_4841400_4842400
ENSMUST00000193678.6	chr9	+	4517	27	FSM	ENSMUSG00000006676.17	ENSMUST00000193678.6	4517	27	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	53.0108423653503	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTGACTGATCCACAA	NA	False	NA	11	True	AATAAA	-15	NA	108368043	108379516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ENSMUST00000193700.2	chr1	-	2676	2	FSM	ENSMUSG00000047539.10	ENSMUST00000193700.2	2676	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGTCAGCAAGGTCATC	NA	False	NA	-1	True	AATAAA	-15	NA	182145952	182142752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182144851_182145374
ENSMUST00000193703.6	chr1	-	4973	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	-319	6575	0	1441	multi-exon	FALSE	canonical	3	260	junction_9	54.2155461448742	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTCTTGTTTGTGACAC	5643	False	NA	-23	True	AATAAA	-15	NA	181847545	181730523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ENSMUST00000193725.2	chr1	-	654	3	FSM	ENSMUSG00000103708.2	ENSMUST00000193725.2	654	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGGCCTCTC	NA	False	NA	NA	False	AATAAA	-39	NA	36050125	36042065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36042488_36042894_36043073_36050071
ENSMUST00000193734.6	chr3	+	8237	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	67.0932187333414	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGACAATTACTAATGT	NA	False	NA	11	True	ATTAAA	-23	NA	22130815	22270758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ENSMUST00000193792.6	chr2	-	2110	11	FSM	ENSMUSG00000025816.16	ENSMUST00000193792.6	2110	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	89.7356673792534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTTGCAGTTGT	NA	False	NA	-59	True	AATAAA	-9	NA	5900145	5875839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ENSMUST00000193823.2	chr1	-	3512	19	FSM	ENSMUSG00000003134.11	ENSMUST00000193823.2	3512	19	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	8.13011472441188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGAACAGTGTGG	NA	False	NA	NA	False	CATAAA	-19	NA	39517781	39412396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ENSMUST00000193868.2	chr9	-	380	3	FSM	ENSMUSG00000091537.3	ENSMUST00000193868.2	380	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	2893	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACTTTTGTAAAAAAA	NA	False	NA	NA	False	AATGAA	-30	NA	108911446	108907253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108907494_108911069_108911158_108911394
ENSMUST00000193892.6	chr1	+	2948	15	FSM	ENSMUSG00000058729.14	ENSMUST00000193892.6	2948	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	32.7924829614275	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468924	180518252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496330_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ENSMUST00000193975.2	chr9	+	1548	1	FSM	ENSMUSG00000006676.17	ENSMUST00000193975.2	1548	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTCTCTCTGTCTAA	2982	False	NA	15	True	AATAAA	-17	NA	108377348	108378896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108377300_108378900
ENSMUST00000193977.6	chr1	-	4300	11	FSM	ENSMUSG00000037474.14	ENSMUST00000193977.6	4300	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	143.039330255703	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	191307625	191281940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300517_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUST00000193979.6	chr1	+	818	4	FSM	ENSMUSG00000026111.16	ENSMUST00000193979.6	818	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	217.192694781999	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATTTTATCCAGCTCTT	NA	False	NA	NA	False	NA	NA	NA	37469266	37476351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_37469575_37470377_37470658_37471631_37471753_37476242
ENSMUST00000193982.2	chr9	-	2163	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	50.5663920010119	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAAAGAAGAAAAC	NA	False	NA	NA	False	AAAACA	-27	NA	21150375	21141928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
ENSMUST00000194029.2	chr1	+	543	2	FSM	ENSMUSG00000103711.2	ENSMUST00000194029.2	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAGTTGTATTTAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	171247286	171247919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171247669_171247758
ENSMUST00000194092.2	chr3	+	553	3	FSM	ENSMUSG00000039221.11	ENSMUST00000194092.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	3771	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACATGTATGGTTCA	NA	False	NA	10	True	AATAAA	-15	NA	28860606	28861564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_28860742_28860818_28861008_28861335
ENSMUST00000194132.2	chr3	-	1204	1	FSM	ENSMUSG00000104028.2	ENSMUST00000194132.2	1204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCCAGAACCACTTTGT	NA	False	NA	NA	False	AAGAAA	-27	NA	92170781	92169577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_92169600_92170800
ENSMUST00000194167.2	chr1	-	589	2	FSM	ENSMUSG00000014226.11	ENSMUST00000194167.2	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	4235	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAACTCTGAGACGCTCC	7445	False	NA	NA	False	NA	NA	NA	160040296	160035656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160036166_160040216
ENSMUST00000194171.6	chr9	+	3252	19	FSM	ENSMUSG00000006676.17	ENSMUST00000194171.6	3252	19	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_18	79.475984415202	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108371828	108378898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ENSMUST00000194175.2	chr3	+	1741	9	FSM	ENSMUSG00000033860.14	ENSMUST00000194175.2	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	1.69096865730859	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGAACTTGACCTGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	82915167	82922012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_82915290_82915459_82915505_82915680_82915865_82915954_82916049_82917370_82917502_82917762_82917897_82918651_82918837_82920070_82920349_82921444
ENSMUST00000194208.6	chr3	+	1527	6	FSM	ENSMUSG00000041750.14	ENSMUST00000194208.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	24.5568727650733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATTGTTTTATTA	NA	False	NA	2	True	AATAAA	-14	NA	86893857	86897087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_86894013_86894294_86894568_86894849_86895129_86895584_86895863_86896457_86896555_86896642
ENSMUST00000194216.2	chr4	+	2459	1	FSM	ENSMUSG00000102813.2	ENSMUST00000194216.2	2459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTAAAGAAGAAAGAAGAAAA	4085	False	NA	NA	False	NA	NA	NA	150152995	150155454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_150153000_150155500
ENSMUST00000194226.2	chr3	+	1457	1	FSM	ENSMUSG00000027671.15	ENSMUST00000194226.2	1457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	32762698	32764155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_32762700_32764200
ENSMUST00000194237.2	chr1	-	1047	2	FSM	ENSMUSG00000055067.16	ENSMUST00000194237.2	1047	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTTCTATTTATTTAT	NA	False	NA	NA	False	ATTAAA	-17	NA	179345570	179335871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_179336701_179345352
ENSMUST00000194244.6	chr17	-	862	5	FSM	ENSMUSG00000073406.11	ENSMUST00000194244.6	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	129.95191418367	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGTTGATTAGTGGAG	NA	False	NA	-79	True	NA	NA	NA	36395115	36391080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394858_36395051
ENSMUST00000194275.2	chr9	-	629	1	FSM	ENSMUSG00000102712.2	ENSMUST00000194275.2	629	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGAGAAGAAAAAAGATCGA	NA	False	NA	NA	False	NA	NA	NA	33071986	33071357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_33071400_33072000
ENSMUST00000194303.6	chr3	+	1379	6	FSM	ENSMUSG00000008604.12	ENSMUST00000194303.6	1379	6	0	0	0	0	multi-exon	FALSE	canonical	3	1330	junction_4	125.024797540328	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTCCATGAACATGTCT	6111	False	NA	NA	False	AATAAA	-15	NA	88461070	88470867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414
ENSMUST00000194318.2	chr3	+	1511	1	FSM	ENSMUSG00000103464.2	ENSMUST00000194318.2	1511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	51011080	51012591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_51011100_51012600
ENSMUST00000194385.2	chr9	+	975	5	FSM	ENSMUSG00000006673.15	ENSMUST00000194385.2	975	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	249.488977712443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTTAGAGAACTGTGAG	1216	False	NA	NA	False	NA	NA	NA	108394354	108422288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108394440_108405787_108406118_108418886_108419065_108419630_108419786_108422061
ENSMUST00000194437.6	chr1	-	1824	3	FSM	ENSMUSG00000026566.16	ENSMUST00000194437.6	643	3	-8	-1173	0	0	multi-exon	FALSE	canonical	3	25	junction_1	400.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462090	165419808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_165421247_165436006_165436174_165461871
ENSMUST00000194452.2	chr3	-	2066	12	FSM	ENSMUSG00000028078.15	ENSMUST00000194452.2	2066	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_7	39.3729781062936	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACACACCTTTCTCTGT	NA	False	NA	NA	False	AATAAA	-20	NA	86827681	86706227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ENSMUST00000194478.6	chr4	-	2903	24	FSM	ENSMUSG00000028559.18	ENSMUST00000194478.6	2903	24	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_19	122.628536784985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAACCTGGCAGCCTTTT	NA	False	NA	34	True	TTTAAA	-38	NA	109059431	108918811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108965077_108965147_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUST00000194542.6	chr9	-	3151	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	41.5143348736313	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCTCTGAATTAACCT	NA	False	NA	1	True	AATAAA	-18	NA	21150628	21141025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
ENSMUST00000194543.4	chr1	-	6330	28	FSM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_27	39.9558741524534	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ENSMUST00000194558.6	chr3	-	3726	17	FSM	ENSMUSG00000027782.11	ENSMUST00000194558.6	3726	17	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	26.0353575690829	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGTGGTGTGTGGAT	NA	False	NA	-1	True	AATAAA	-33	NA	69034425	68979553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ENSMUST00000194563.6	chr1	-	6698	42	FSM	ENSMUSG00000026116.12	ENSMUST00000194563.6	6698	42	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_41	58.4663297908698	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	6926	False	NA	-1	True	AATAAA	-22	NA	36978903	36831274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245_36978638_36978777
ENSMUST00000194565.2	chr2	-	1303	6	FSM	ENSMUSG00000025816.16	ENSMUST00000194565.2	1303	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	114.035783857524	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5900145	5886618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900070
ENSMUST00000194589.2	chr1	-	2449	2	FSM	ENSMUSG00000066595.10	ENSMUST00000194589.2	2449	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATGTCCTTTAA	NA	False	NA	-2	True	AATAAA	-17	NA	190740652	190738046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190740408_190740564
ENSMUST00000194594.2	chr1	+	1551	1	FSM	ENSMUSG00000103071.2	ENSMUST00000194594.2	1551	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTGCAGGTCATATA	377	False	NA	NA	False	NA	NA	NA	44796101	44797652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_44796100_44797700
ENSMUST00000194613.2	chr1	-	2558	1	FSM	ENSMUSG00000026701.16	ENSMUST00000194613.2	2558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAACAA	NA	False	NA	NA	False	ATTAAA	-30	NA	161078732	161076174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_161076200_161078700
ENSMUST00000194632.2	chr1	-	2433	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	5.99247212944893	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGAACGTGTTTGACTTG	NA	False	NA	-5	True	AATAAA	-19	NA	155688590	155653907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ENSMUST00000194649.2	chr3	+	525	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	3779	junction_1	1855.270390596	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGTTCATCAGTGTGT	NA	False	NA	19	True	AATAAA	-24	NA	28859617	28861573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
ENSMUST00000194650.6	chr1	-	3576	18	FSM	ENSMUSG00000026082.12	ENSMUST00000194650.6	3576	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_14	47.4450328471644	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	2547	False	NA	-10	True	AATAAA	-12	NA	38127213	38091876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38122784_38122902_38124625_38124734_38127051
ENSMUST00000194670.2	chr1	+	3291	1	FSM	ENSMUSG00000045216.8	ENSMUST00000194670.2	3291	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACCTGAGTTGGTACTG	8752	False	NA	13	True	AATAAA	-30	NA	36140770	36144061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_36140800_36144100
ENSMUST00000194701.6	chr9	+	2020	6	FSM	ENSMUSG00000007815.14	ENSMUST00000194701.6	852	6	32	-1200	0	0	multi-exon	FALSE	canonical	3	21	junction_1	597.472543302201	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTATTCTCTTGTGT	NA	False	NA	15	True	AATAAA	-15	NA	108184027	108215133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108184276_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ENSMUST00000194706.2	chr6	+	2527	1	FSM	ENSMUSG00000104222.2	ENSMUST00000194706.2	2527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	117693302	117695829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_117693300_117695800
ENSMUST00000194727.6	chr1	-	6784	19	FSM	ENSMUSG00000057335.12	ENSMUST00000194727.6	6784	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	15.7911719359619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAATGATCATAGATTTC	NA	False	NA	-10	True	AATAAA	-17	NA	176621175	176561228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570036_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610122_176616032_176616112_176620101_176620192_176621070
ENSMUST00000194740.6	chr1	+	4418	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_25	17.4221203306776	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGCAGATGCTTTATT	NA	False	NA	88	True	TATAAA	-19	NA	184936313	185016382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ENSMUST00000194747.2	chr1	-	2605	4	FSM	ENSMUSG00000058407.13	ENSMUST00000194747.2	2605	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_1	99.432836069826	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCACATGTCTGTTTTT	NA	False	NA	-5	True	NA	NA	NA	38036305	38026476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_38026861_38029283_38029539_38033072_38034923_38036189
ENSMUST00000194801.6	chr9	-	2691	20	FSM	ENSMUSG00000032580.13	ENSMUST00000194801.6	2691	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_17	154.105011503965	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	NA	False	NA	-2	True	AAGAAA	-16	NA	107637762	107617694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107634107_107634192_107636974_107637049_107637520
ENSMUST00000194840.2	chr3	-	1822	1	FSM	ENSMUSG00000074653.11	ENSMUST00000194840.2	1822	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAGAAAGCACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	30753917	30752095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_30752100_30753900
ENSMUST00000194847.2	chr1	+	2037	4	FSM	ENSMUSG00000058729.14	ENSMUST00000194847.2	2037	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	9.41629792788369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180508451	180518252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_180508791_180515524_180515705_180515827_180515926_180516832
ENSMUST00000194888.2	chr18	+	3247	1	FSM	ENSMUSG00000103144.2	ENSMUST00000194888.2	3247	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAGTTCTATAATCTC	NA	False	NA	NA	False	TATAAA	-40	NA	37794845	37798092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_37794800_37798100
ENSMUST00000194894.4	chr1	-	885	4	FSM	ENSMUSG00000079610.10	ENSMUST00000194894.4	664	4	0	-221	0	221	multi-exon	FALSE	canonical	3	25	junction_1	19.6015872373189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATGGGCAAAGATAAAT	7014	False	NA	-8	True	AATAAA	-19	NA	36586312	36578219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_36578616_36580904_36581144_36581842_36581947_36586166
ENSMUST00000194917.6	chr1	-	3029	5	FSM	ENSMUSG00000066595.10	ENSMUST00000194917.6	3029	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	10.0591997693654	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATATGTCCTTTAAAAA	NA	False	NA	1	True	AATAAA	-20	NA	190744108	190738043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732
ENSMUST00000194928.2	chr18	+	4713	4	FSM	ENSMUSG00000104063.2	ENSMUST00000194928.2	4713	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	104.703815063678	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37884652	37974926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_37887247_37958073_37958133_37966317_37966407_37972955
ENSMUST00000194932.6	chr9	+	2054	11	FSM	ENSMUSG00000010048.11	ENSMUST00000194932.6	2054	11	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_10	36.8511872264653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464924	107470237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUST00000194939.2	chr9	+	760	2	FSM	ENSMUSG00000032612.15	ENSMUST00000194939.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGCCTCCAGCAAATTT	3997	False	NA	-4	True	NA	NA	NA	108268074	108269444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108268268_108268877
ENSMUST00000194967.2	chr9	-	1125	4	FSM	ENSMUSG00000037190.13	ENSMUST00000194967.2	658	4	0	-467	0	0	multi-exon	FALSE	canonical	3	15	junction_2	45.536310297998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGGAGGAGCAGCGC	NA	False	NA	-20	True	AATAAA	-19	NA	107419326	107416773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107417585_107418201_107418269_107418695_107418850_107419233
ENSMUST00000194979.6	chr3	+	1789	4	FSM	ENSMUSG00000037661.15	ENSMUST00000194979.6	346	4	-43	-1400	0	0	multi-exon	FALSE	canonical	3	233	junction_2	25.3026129524645	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910098	30951341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30910207_30931383_30931482_30944090_30944191_30949858
ENSMUST00000195002.2	chr1	+	394	2	FSM	ENSMUSG00000063659.12	ENSMUST00000195002.2	394	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTATTTCCACCTCTT	NA	False	NA	NA	False	NA	NA	NA	177269916	177274803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_177270162_177274654
ENSMUST00000195008.6	chr3	-	6886	27	FSM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	26.4596656313991	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27764547	27470310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27736886_27736964_27764519
ENSMUST00000195014.6	chr3	+	1059	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	0	0	0	0	multi-exon	FALSE	canonical	3	3697	junction_1	473.044775893361	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTTGTCTTGCGTCAA	3557	False	NA	15	True	AATAAA	-17	NA	88486914	88495726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUST00000195015.6	chr1	+	1573	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGTCTCCTGTTCAAA	NA	False	NA	15	True	AATAAA	-22	NA	167135946	167158354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ENSMUST00000195015.6-0	chr1	+	1215	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	358	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	23.6108496717552	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGTCTCCTGTTCAAA	NA	False	NA	15	True	AATAAA	-22	NA	167136304	167158354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ENSMUST00000195021.2	chr12	-	874	1	FSM	ENSMUSG00000104103.2	ENSMUST00000195021.2	874	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGTGAATGAAAAAAA	3491	False	NA	NA	False	AAAAAG	-39	NA	113594487	113593613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_113593600_113594500
ENSMUST00000195161.2	chr3	-	147	1	FSM	ENSMUSG00000103574.2	ENSMUST00000195161.2	147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAATTCACACAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	88192060	88191913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88191900_88192100
ENSMUST00000195209.2	chr1	-	1193	2	FSM	ENSMUSG00000026516.9	ENSMUST00000195209.2	1193	2	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCACAAAAGAGGGCCGA	NA	False	NA	NA	False	TATAAA	-7	NA	180923090	180920823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_180921475_180922548
ENSMUST00000195235.6	chr9	-	1162	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGGAGGAGCAGCGC	NA	False	NA	-20	True	AATAAA	-19	NA	107419392	107416773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
ENSMUST00000195235.6-0	chr9	-	1096	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	66	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	4.08248290463863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCGGGAGGAGCAGCGC	NA	False	NA	-20	True	AATAAA	-19	NA	107419326	107416773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
ENSMUST00000195240.2	chr1	+	1221	1	FSM	ENSMUSG00000102917.2	ENSMUST00000195240.2	1221	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTTGCTCAGCCTGC	NA	False	NA	NA	False	NA	NA	NA	33104210	33105431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_33104200_33105400
ENSMUST00000195247.6-1	chr1	-	1049	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	650	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	302.235318088406	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATGTCTGTTTTTAA	NA	False	NA	-3	True	NA	NA	NA	38036324	38026474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ENSMUST00000195280.3	chrX	-	4212	3	FSM	ENSMUSG00000087403.10	ENSMUST00000195280.3	4212	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	19	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACTGTGTGACTTCC	NA	False	NA	NA	False	NA	NA	NA	151110491	151077823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_151081871_151110156_151110236_151110405
ENSMUST00000195291.6	chr1	-	2663	12	FSM	ENSMUSG00000016181.11	ENSMUST00000195291.6	5504	12	-28	2869	0	466	multi-exon	FALSE	canonical	2	5	junction_2	17.8908536584507	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTATGCGTATTG	NA	False	NA	-17	True	NA	NA	NA	192812580	192789594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_192790095_192796064_192796289_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ENSMUST00000195372.2	chr1	-	4901	9	FSM	ENSMUSG00000030768.13	ENSMUST00000195372.2	4901	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	30.8666486681013	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCTGTCTCCGTCGTTCT	NA	False	NA	2	True	AATAAA	-34	NA	183003054	182867829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_183002886
ENSMUST00000195373.2	chr1	+	587	4	FSM	ENSMUSG00000026087.12	ENSMUST00000195373.2	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	1006	junction_1	22.6421435969889	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCGCTGATGGAGTCCTG	NA	False	NA	20	True	ATTAAA	-20	NA	37933015	37937419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUST00000195387.2	chr9	+	732	3	FSM	ENSMUSG00000025651.15	ENSMUST00000195387.2	732	3	0	0	0	0	multi-exon	FALSE	canonical	3	5755	junction_2	153.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGAGTCTGTTCCTT	NA	False	NA	NA	False	TTTAAA	-37	NA	108765959	108773491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108766225_108771151_108771239_108773111
ENSMUST00000195394.6	chr1	+	2584	10	FSM	ENSMUSG00000026554.16	ENSMUST00000195394.6	2584	10	0	0	0	0	multi-exon	TRUE	canonical	3	418	junction_1	56.719147810903	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAAAATACA	NA	False	NA	NA	False	TTTAAA	-5	NA	171975655	172016148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919
ENSMUST00000195396.6	chr3	+	3395	7	FSM	ENSMUSG00000037730.14	ENSMUST00000195396.6	4775	7	8	1372	0	0	multi-exon	FALSE	canonical	3	28	junction_5	75.410911382608	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8787	False	NA	NA	False	AATAAA	-35	NA	30656787	30672650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ENSMUST00000195426.2	chr1	+	1746	1	FSM	ENSMUSG00000102700.2	ENSMUST00000195426.2	1746	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	796	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGGAGAAAAATCATT	8653	False	NA	NA	False	NA	NA	NA	89024794	89026540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_89024800_89026500
ENSMUST00000195429.6	chr9	-	509	3	FSM	ENSMUSG00000039952.16	ENSMUST00000195429.6	509	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	82.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGAAGAACCAGCTTGA	NA	False	NA	NA	False	NA	NA	NA	108140950	108095376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108095610_108130207_108130357_108140823
ENSMUST00000195456.2	chr9	+	818	2	FSM	ENSMUSG00000062867.14	ENSMUST00000195456.2	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	1479	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAAGGCCGGCCCTGCT	3978	False	NA	NA	False	NA	NA	NA	108440467	108441369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108440711_108440794
ENSMUST00000195481.2	chr1	-	1237	4	FSM	ENSMUSG00000039246.9	ENSMUST00000195481.2	584	4	0	-653	0	-149	multi-exon	FALSE	canonical	3	17	junction_2	56.8174464598878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGACTTTCAGATTTA	NA	False	NA	-11	True	AATAAA	-15	NA	185849485	185820076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_185820966_185821640_185821757_185846460_185846561_185849353
ENSMUST00000195505.2	chr3	-	442	2	FSM	ENSMUSG00000053870.8	ENSMUST00000195505.2	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCTGGGACCAAAATTGG	NA	False	NA	NA	False	AAGAAA	-43	NA	154798864	154797046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_154797196_154798571
ENSMUST00000195526.2	chr1	-	631	1	FSM	ENSMUSG00000103653.2	ENSMUST00000195526.2	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACTGAAGAGACAAGAGC	NA	False	NA	NA	False	NA	NA	NA	191758750	191758119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191758100_191758800
ENSMUST00000195530.6	chr1	-	6886	5	FSM	ENSMUSG00000016200.15	ENSMUST00000195530.6	2078	5	-55	-4753	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.40744386111339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACGTTTCTTCACATTT	186	False	NA	NA	False	AATAAA	-18	NA	192718025	192573540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_192579929_192584059_192584250_192669025_192669191_192709277_192709326_192717930
ENSMUST00000195540.2	chr9	+	1256	1	FSM	ENSMUSG00000102861.2	ENSMUST00000195540.2	1256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTATAGTTATTCTATAC	NA	False	NA	NA	False	AATAAA	-24	NA	98472547	98473803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98472500_98473800
ENSMUST00000195561.6	chr3	-	3486	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_11	36.9688156874593	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86827642	86693465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ENSMUST00000195650.6	chr1	-	4230	16	FSM	ENSMUSG00000037474.14	ENSMUST00000195650.6	4230	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	170.83122275119	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTGTGTTACTGGGGGT	NA	False	NA	3	True	NA	NA	NA	191307633	191269467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191297430_191297463_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUST00000195654.2	chr1	-	544	4	FSM	ENSMUSG00000014226.11	ENSMUST00000195654.2	544	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2050.03940341535	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAGCAGTTCAAAAAAA	7366	False	NA	NA	False	NA	NA	NA	160040375	160033685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_160033766_160034182_160034280_160035957_160036166_160040216
ENSMUST00000195657.6	chr3	-	3504	4	FSM	ENSMUSG00000050144.14	ENSMUST00000195657.6	3504	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	25.4689353265241	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTCTGGCTTTTGGGTT	4093	False	NA	-4	True	ATTAAA	-18	NA	88332419	88317805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332080
ENSMUST00000195680.2	chr2	+	1844	1	FSM	ENSMUSG00000103475.2	ENSMUST00000195680.2	1844	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGGAGAAAAATCAT	8597	False	NA	NA	False	NA	NA	NA	14350487	14352331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_14350500_14352300
ENSMUST00000195708.2	chr3	-	6964	30	FSM	ENSMUSG00000062232.15	ENSMUST00000195708.2	6964	30	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_16	7.69637869042917	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTTGTCTAAACTTTT	NA	False	NA	-21	True	AATAAA	-13	NA	79193824	78969837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78989930_78989955_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79077045_79077064_79080214_79080383_79082280_79082357_79103241_79103326_79117997_79118055_79122263_79122335_79193770
ENSMUST00000195717.6	chr1	-	6967	20	FSM	ENSMUSG00000057335.12	ENSMUST00000195717.6	6967	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	17.0540935045859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641633	176561227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610122_176616032_176616112_176620101_176620192_176621070_176621216_176641461
ENSMUST00000195751.2	chr3	+	3474	8	FSM	ENSMUSG00000037730.14	ENSMUST00000195751.2	3474	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	49.6608908662808	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGACTCAACCCTTTTTA	8792	False	NA	NA	False	AATAAA	-35	NA	30656792	30672650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_30656845_30657652_30657820_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUST00000195764.2	chr18	+	4615	4	FSM	ENSMUSG00000103081.4	ENSMUST00000195764.2	4615	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	100.00333327778	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	3942	False	NA	14	True	AATAAA	-17	NA	37894853	37974923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_37897353_37958073_37958133_37966317_37966407_37972955
ENSMUST00000195815.3	chr1	-	2214	11	FSM	ENSMUSG00000026637.15	ENSMUST00000195815.3	2214	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	1.02469507659596	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCTGGGGCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	191776868	191729167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191729969_191731758_191731928_191733717_191733859_191738764_191738858_191741554_191741630_191742389_191742468_191743409_191743575_191746941_191747044_191751193_191751252_191754716_191754936_191776555
ENSMUST00000195833.6	chr17	-	829	5	FSM	ENSMUSG00000073406.11	ENSMUST00000195833.6	829	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	176.893329438959	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGTTGATTAGTGGAG	NA	False	NA	-79	True	NA	NA	NA	36395115	36391080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394587_36394825_36395051
ENSMUST00000195838.6	chr17	-	1105	6	FSM	ENSMUSG00000073406.11	ENSMUST00000195838.6	1105	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	180.752427369593	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGGTTGATTAGTGGAG	NA	False	NA	-79	True	NA	NA	NA	36395115	36391080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_36391216_36391890_36392008_36392133_36392410_36394124_36394401_36394587_36394825_36395051
ENSMUST00000195855.6	chr3	-	1587	4	FSM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	22.2161102706022	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	False	NA	0	True	AATAAA	-20	NA	5641205	5625559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_5626821_5628224_5628333_5628679_5628790_5641097
ENSMUST00000195860.6	chr1	+	3960	32	FSM	ENSMUSG00000026074.16	ENSMUST00000195860.6	3960	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	32.3828875300934	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGAGCGAGACCTTGGA	NA	False	NA	NA	False	NA	NA	NA	39940338	40063914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046691_40047490_40047500_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUST00000195905.5	chr3	+	6823	15	FSM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_9	27.5725388377491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTCTGCTTCCCTGTGTA	NA	False	NA	NA	False	CATAAA	-20	NA	116671875	116701826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ENSMUST00000195943.2	chr5	-	1712	14	FSM	ENSMUSG00000028949.14	ENSMUST00000195943.2	1712	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_12	70.4408770513493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTGTGGTCATTGTG	642	False	NA	0	True	ATTAAA	-17	NA	24829409	24797619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521_24827667_24829345
ENSMUST00000195955.2	chr3	+	3804	6	FSM	ENSMUSG00000051278.13	ENSMUST00000195955.2	3804	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	13.6	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTATGTATGTGCAT	NA	False	NA	NA	False	NA	NA	NA	127347281	127358487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123
ENSMUST00000195970.5	chr14	-	2057	10	FSM	ENSMUSG00000000958.11	ENSMUST00000195970.5	2057	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	52.275150483042	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCTGAGTGGCTTTAT	6547	False	NA	-7	True	AATAAA	-14	NA	54647673	54606901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54647534
ENSMUST00000195995.5	chr3	-	3516	26	FSM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_21	259.732465433184	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3550	False	NA	-4	True	AATAAA	-19	NA	89959779	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000196055.2	chr5	+	2965	17	FSM	ENSMUSG00000039623.14	ENSMUST00000196055.2	2965	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	25.1941678519057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGCCTGGCTCAGTGA	8720	False	NA	NA	False	NA	NA	NA	142449828	142463809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460176_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ENSMUST00000196059.5	chr5	+	1961	10	FSM	ENSMUSG00000058503.12	ENSMUST00000196059.5	1961	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	63.1977105383095	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTGTGTCATTTGAAT	NA	False	NA	NA	False	NA	NA	NA	3593843	3619813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ENSMUST00000196060.5	chr9	+	2439	5	FSM	ENSMUSG00000032482.10	ENSMUST00000196060.5	3790	5	1350	1	-350	0	multi-exon	TRUE	canonical	3	35	junction_4	8.38152730712011	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTAGTGCCGTGGCC	9787	False	NA	19	True	AATAAA	-20	NA	110074200	110091643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110085212_110085289_110091127
ENSMUST00000196069.5	chr5	+	1150	4	FSM	ENSMUSG00000007812.17	ENSMUST00000196069.5	1150	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	192.902969276151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1305	False	NA	NA	False	AATACA	-16	NA	145168538	145174658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145173859
ENSMUST00000196109.5	chr5	-	1660	11	FSM	ENSMUSG00000037364.13	ENSMUST00000196109.5	1660	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	326.923232579148	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAGTGTGTGTTAACTGT	9773	False	NA	-22	True	AGTAAA	-8	NA	137297907	137293986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296931_137297146_137297819
ENSMUST00000196111.5	chr5	+	1394	10	FSM	ENSMUSG00000029622.17	ENSMUST00000196111.5	1394	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	583.199688394301	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACAAACAACC	8129	False	NA	-84	True	NA	NA	NA	145051121	145064883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062688_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUST00000196114.2	chr3	+	346	1	FSM	ENSMUSG00000106037.2	ENSMUST00000196114.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGACAACTGAATAAATCG	NA	False	NA	-8	True	NA	NA	NA	119503164	119503510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_119503200_119503500
ENSMUST00000196123.2	chr3	-	504	2	FSM	ENSMUSG00000105260.2	ENSMUST00000196123.2	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTGGGTAGCTCAAT	NA	False	NA	NA	False	NA	NA	NA	41436826	41436195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41436380_41436506
ENSMUST00000196130.5	chr5	-	2547	10	FSM	ENSMUSG00000029560.13	ENSMUST00000196130.5	2547	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_8	16.9144543344472	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTTCCACGCTGCAGT	NA	False	NA	-10	True	AATAAA	-16	NA	140346170	140326055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946
ENSMUST00000196136.2	chr13	-	2328	1	FSM	ENSMUSG00000105848.2	ENSMUST00000196136.2	2328	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGATAAAAAAATAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	19579623	19577295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_19577300_19579600
ENSMUST00000196169.2	chr5	-	1299	6	FSM	ENSMUSG00000036526.9	ENSMUST00000196169.2	1299	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.77359245282264	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGTTCTTATCCCACAG	NA	False	NA	NA	False	ATTAAA	-21	NA	140867960	140858746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_140859285_140860095_140860212_140862151_140862277_140863717_140863898_140866052_140866189_140867756
ENSMUST00000196171.5	chr9	-	3885	23	FSM	ENSMUSG00000032480.18	ENSMUST00000196171.5	3885	23	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_21	194.977308491133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	False	NA	-2	True	AATAAA	-20	NA	109946505	109913388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942094_109944558_109944651_109946425
ENSMUST00000196202.5	chr3	-	495	5	FSM	ENSMUSG00000062006.13	ENSMUST00000196202.5	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	3611.9776092883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGCACATTTTTTAAGT	NA	False	NA	-56	True	NA	NA	NA	130523970	130520524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523837
ENSMUST00000196266.5	chr3	-	1271	9	FSM	ENSMUSG00000038975.15	ENSMUST00000196266.5	1271	9	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_3	203.564140690348	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAGTCTTCTGAGTCCA	7028	False	NA	-29	True	AATAAA	-16	NA	153617718	153613090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ENSMUST00000196280.5	chr3	-	3598	15	FSM	ENSMUSG00000028149.13	ENSMUST00000196280.5	3598	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	20.5834538265222	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGATTACTTGGTTTCT	NA	False	NA	-6	True	AATAAA	-21	NA	138780898	138631666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ENSMUST00000196287.2	chr5	+	2228	1	FSM	ENSMUSG00000104814.2	ENSMUST00000196287.2	2228	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	129633210	129635438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129633200_129635400
ENSMUST00000196320.2	chr5	+	3848	1	FSM	ENSMUSG00000105549.2	ENSMUST00000196320.2	3848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACCTAAGATACCCAAG	NA	False	NA	NA	False	NA	NA	NA	11510390	11514238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_11510400_11514200
ENSMUST00000196390.2	chr5	+	1629	1	FSM	ENSMUSG00000105416.2	ENSMUST00000196390.2	1629	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	43216597	43218226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_43216600_43218200
ENSMUST00000196398.5	chr3	-	9021	12	FSM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	40.7374175676692	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGATTTTGGCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	133250129	133169599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ENSMUST00000196417.2	chr5	-	1790	1	FSM	ENSMUSG00000040429.7	ENSMUST00000196417.2	1790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAATCTGAAGTGTGTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	3943896	3942106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3942100_3943900
ENSMUST00000196423.5	chr5	-	3376	16	FSM	ENSMUSG00000029472.14	ENSMUST00000196423.5	3376	16	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_7	355.400894140062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959343	122925783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000196430.2	chr3	+	2020	1	FSM	ENSMUSG00000068744.13	ENSMUST00000196430.2	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAACAAAATAGAGTCGG	8047	False	NA	NA	False	NA	NA	NA	108292169	108294189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_108292200_108294200
ENSMUST00000196456.5	chr3	+	713	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	0	1891	0	0	multi-exon	FALSE	canonical	3	2213	junction_2	872.428931202995	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUST00000196466.2	chr3	-	448	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	15.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGTCCTGTTTCTGGA	NA	False	NA	48	True	AATAAA	-21	NA	123302053	123301200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_123301310_123301465_123301512_123301760
ENSMUST00000196469.5	chr3	-	3084	25	FSM	ENSMUSG00000028163.18	ENSMUST00000196469.5	3084	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	15.2656454352758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGAATCCAAAGGTGCT	NA	False	NA	NA	False	NA	NA	NA	135375100	135291041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135344900_135344918_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030
ENSMUST00000196483.5	chr5	-	2814	11	FSM	ENSMUSG00000039753.17	ENSMUST00000196483.5	2814	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	167.474057692527	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8869	False	NA	-1	True	AATAAA	-28	NA	43939451	43901957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918195_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUST00000196492.3	chr5	-	3991	1	FSM	ENSMUSG00000106044.3	ENSMUST00000196492.3	3991	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	427	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAAAGCTTTGCCGCA	NA	False	NA	NA	False	NA	NA	NA	60965049	60961058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_60961100_60965000
ENSMUST00000196501.2	chr3	+	463	1	FSM	ENSMUSG00000104616.2	ENSMUST00000196501.2	463	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGACTGTGGATAACTCTAA	NA	False	NA	NA	False	NA	NA	NA	41440167	41440630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_41440200_41440600
ENSMUST00000196530.2	chr3	-	3778	30	FSM	ENSMUSG00000027933.12	ENSMUST00000196530.2	3778	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.2283287656038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACGAAAACGAAAAGGCTC	NA	False	NA	NA	False	NA	NA	NA	90340920	90299382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90299450_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ENSMUST00000196605.2	chr5	-	515	3	FSM	ENSMUSG00000002221.12	ENSMUST00000196605.2	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	17	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCCCTGCTCTTTCCT	NA	False	NA	NA	False	NA	NA	NA	27996381	27988576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_27988772_27993640_27993776_27996196
ENSMUST00000196640.5	chr5	-	2422	17	FSM	ENSMUSG00000029472.14	ENSMUST00000196640.5	2422	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	562.145162385793	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959350	122925783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122926082_122926364_122926504_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000196655.5	chr3	-	2156	11	FSM	ENSMUSG00000005968.15	ENSMUST00000196655.5	2156	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	29.3845197340368	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCTATAGTGTGGTCTAG	6512	False	NA	NA	False	NA	NA	NA	94566107	94520302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94542715_94542803_94546231_94546334_94566031
ENSMUST00000196667.5	chr5	-	675	7	FSM	ENSMUSG00000047215.15	ENSMUST00000196667.5	675	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5003.25345539169	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATATATTGATTTGTG	NA	False	NA	-20	True	AATAAA	-2	NA	65548329	65545720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65545811_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ENSMUST00000196684.2	chr7	-	3642	23	FSM	ENSMUSG00000040907.16	ENSMUST00000196684.2	3642	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	15.6939347130304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTGTGTGTGTTATG	NA	False	NA	-4	True	AATATA	-15	NA	24705368	24677594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700623_24705179
ENSMUST00000196695.5	chr3	+	2374	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	0	0	0	0	multi-exon	FALSE	canonical	1	416	junction_13	300.522177130688	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916155	151938408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUST00000196698.5	chr5	+	2625	16	FSM	ENSMUSG00000029439.15	ENSMUST00000196698.5	2625	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	21.3805726978696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACGAGAAGAAGAAGAAACGG	NA	False	NA	NA	False	NA	NA	NA	129578303	129646712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129578661_129581046_129581170_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704
ENSMUST00000196700.5	chr3	+	6322	29	FSM	ENSMUSG00000037400.18	ENSMUST00000196700.5	6322	29	0	0	0	0	multi-exon	FALSE	canonical	2	274	junction_18	53.267171706715	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	False	NA	6	True	AATAAA	-12	NA	35808282	35910420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
ENSMUST00000196709.5	chr3	-	1382	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_10	899.425283166979	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009195	89000894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
ENSMUST00000196727.5	chr5	+	2749	12	FSM	ENSMUSG00000054099.12	ENSMUST00000196727.5	2749	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	12.5210566448736	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGATGTGTATTTGTG	NA	False	NA	NA	False	ATTAAA	-10	NA	8472857	8504789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480430_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ENSMUST00000196733.5	chr3	-	2555	12	FSM	ENSMUSG00000005968.15	ENSMUST00000196733.5	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	16.8728840118112	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCCCGTGGGTCTTT	6440	False	NA	-7	True	AATAAA	-14	NA	94566179	94520065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
ENSMUST00000196739.5	chr3	+	2526	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196739.5	2526	20	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_19	415.06742768987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	NA	False	NA	25	True	AATAAA	-15	NA	151916134	151938408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
ENSMUST00000196742.2	chr5	-	1084	5	FSM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	7.3824115301167	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTTAGCAGTGTCTT	4707	False	NA	0	True	AATAAA	-21	NA	122917388	122894338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ENSMUST00000196744.2	chr3	-	2231	1	FSM	ENSMUSG00000104528.2	ENSMUST00000196744.2	2231	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	157602828	157600597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157600600_157602800
ENSMUST00000196769.5	chr3	+	1702	13	FSM	ENSMUSG00000001016.13	ENSMUST00000196769.5	1702	13	0	0	0	0	multi-exon	FALSE	canonical	3	1252	junction_8	69.553137160655	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTTTTGGTTTTATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	90383432	90395270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394405_90394533_90394625_90394765
ENSMUST00000196771.2	chr5	+	1607	1	FSM	ENSMUSG00000105161.2	ENSMUST00000196771.2	1607	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATAATTCTTGGACATC	678	False	NA	NA	False	TATAAA	-31	NA	110809257	110810864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110809300_110810900
ENSMUST00000196788.2	chr9	-	1424	2	FSM	ENSMUSG00000032480.18	ENSMUST00000196788.2	1424	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	109946442	109943243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109944651_109946425
ENSMUST00000196801.5	chr5	-	4469	17	FSM	ENSMUSG00000043323.18	ENSMUST00000196801.5	4469	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	70.1826857209098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAACAAAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	110596352	110510656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ENSMUST00000196843.5	chr3	-	3975	28	FSM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	196.719480946381	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3560	False	NA	99	True	AAAAAG	-18	NA	89959769	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUST00000196851.2	chr5	-	808	1	FSM	ENSMUSG00000105565.2	ENSMUST00000196851.2	808	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATCTTTATTTTGCAA	NA	False	NA	NA	False	AATAAA	-14	NA	23880544	23879736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23879700_23880500
ENSMUST00000196882.2	chr14	+	801	4	FSM	ENSMUSG00000000959.8	ENSMUST00000196882.2	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	40.4502437844597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGACACGCTATCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	54598501	54604500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54598926_54600738_54600953_54604165_54604310_54604481
ENSMUST00000196908.5	chr3	-	2180	8	FSM	ENSMUSG00000028273.16	ENSMUST00000196908.5	1196	8	-78	-906	0	0	multi-exon	FALSE	canonical	3	7	junction_1	69.1041804459183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATACTTGTTTTCTTT	7000	False	NA	NA	False	AATAAA	-16	NA	142101457	142008075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_142009183_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ENSMUST00000196916.2	chr3	-	622	1	FSM	ENSMUSG00000105944.2	ENSMUST00000196916.2	622	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCATGTTGGAGAGTT	7509	False	NA	NA	False	AAAAAG	-41	NA	107775959	107775337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107775300_107776000
ENSMUST00000196929.5	chr5	-	4259	15	FSM	ENSMUSG00000062604.12	ENSMUST00000196929.5	4259	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	95.1973514037324	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCACTCCTT	NA	False	NA	NA	False	NA	NA	NA	23881446	23710449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23881311
ENSMUST00000196981.5	chr9	+	1839	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.6262146270679	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	False	NA	46	True	AATGAA	-18	NA	110947180	111053290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUST00000196988.5	chr3	-	3189	33	FSM	ENSMUSG00000027855.14	ENSMUST00000196988.5	3189	33	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_28	25.0723951787618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATTCATATTTTAAAATT	NA	False	NA	NA	False	ATTAAA	-42	NA	102843416	102726056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
ENSMUST00000197014.2	chr3	+	5342	1	FSM	ENSMUSG00000105176.2	ENSMUST00000197014.2	5342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGGACTCCTAAAGTG	NA	False	NA	NA	False	AATAAA	-37	NA	34124807	34130149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_34124800_34130100
ENSMUST00000197021.2	chr5	-	8067	34	FSM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_19	39.35079222182	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTTCTACTTGTATA	5158	False	NA	NA	False	ATTAAA	-13	NA	90487602	90376599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90487507
ENSMUST00000197044.2	chr5	+	714	1	FSM	ENSMUSG00000029614.14	ENSMUST00000197044.2	714	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	AAAAAG	-10	NA	121342608	121343322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121342600_121343300
ENSMUST00000197064.5	chr3	+	1259	7	FSM	ENSMUSG00000091512.6	ENSMUST00000197064.5	733	7	20	-546	0	0	multi-exon	FALSE	canonical	2	2	junction_1	115.993773779266	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	80	False	NA	2	True	AATAAA	-22	NA	137624286	137634526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_137624389_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ENSMUST00000197074.5	chr5	-	2413	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	522.501461570922	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	False	NA	-19	True	AATAAA	-20	NA	122959343	122925785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000197075.2	chr3	-	795	1	FSM	ENSMUSG00000104795.2	ENSMUST00000197075.2	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96632636	96631841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96631800_96632600
ENSMUST00000197095.5	chr5	+	617	4	FSM	ENSMUSG00000097908.8	ENSMUST00000197095.5	617	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	17.326921891156	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTTCATCTATGGTCT	NA	False	NA	NA	False	NA	NA	NA	136948205	136962539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136948286_136951160_136951282_136954557_136954750_136962315
ENSMUST00000197111.2	chr3	-	419	4	FSM	ENSMUSG00000027679.14	ENSMUST00000197111.2	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	3089	junction_3	316.042191276207	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCAGTGTCTTGGTATA	NA	False	NA	-4	True	AATAAA	-44	NA	34134329	34131502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232
ENSMUST00000197112.2	chr5	+	425	1	FSM	ENSMUSG00000029390.14	ENSMUST00000197112.2	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATATACAGTAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	124679398	124679823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124679400_124679800
ENSMUST00000197147.2	chr3	-	382	2	FSM	ENSMUSG00000038975.15	ENSMUST00000197147.2	382	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGCTGGAGAAGCATG	6178	False	NA	NA	False	NA	NA	NA	153618568	153617622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153617670_153618233
ENSMUST00000197153.2	chr5	-	474	3	FSM	ENSMUSG00000105987.5	ENSMUST00000197153.2	474	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCTGAAACATGCCACAA	5256	False	NA	NA	False	ACTAAA	-32	NA	23917665	23914993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23915407_23916113_23916149_23917639
ENSMUST00000197177.5	chr3	-	3503	12	FSM	ENSMUSG00000042520.17	ENSMUST00000197177.5	3503	12	0	0	0	0	multi-exon	FALSE	canonical	3	915	junction_2	55.1643674668398	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGCGTTCTTTCCGTG	NA	False	NA	-3	True	AATAAA	-20	NA	89928600	89913525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545
ENSMUST00000197178.2	chr5	-	372	2	FSM	ENSMUSG00000104846.2	ENSMUST00000197178.2	372	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATTTTCCAGCTCTCTC	NA	False	NA	NA	False	GATAAA	-30	NA	43512602	43510389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_43510700_43512540
ENSMUST00000197188.5	chr5	+	4077	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTAGCACTTGAGATC	NA	False	NA	NA	False	ATTAAA	-13	NA	110378869	110403335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ENSMUST00000197188.5-0	chr5	+	3241	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	37	799	0	-799	multi-exon	FALSE	canonical	3	178	junction_3	31.2021856428182	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGTCTGATATTTTG	NA	False	NA	6	True	AATACA	-16	NA	110378906	110402536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ENSMUST00000197222.2	chr3	+	168	1	FSM	ENSMUSG00000106512.2	ENSMUST00000197222.2	168	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACACATGCTAGCGCTAG	NA	False	NA	NA	False	NA	NA	NA	35467981	35468149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_35468000_35468100
ENSMUST00000197237.2	chrX	+	1834	1	FSM	ENSMUSG00000105993.2	ENSMUST00000197237.2	1834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAGAAGGTAAGCAAAAG	NA	False	NA	NA	False	AAGAAA	-40	NA	41578567	41580401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_41578600_41580400
ENSMUST00000197255.2	chr5	+	438	3	FSM	ENSMUSG00000008090.15	ENSMUST00000197255.2	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	32.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTGCGGCTACAGTGC	NA	False	NA	NA	False	NA	NA	NA	108842095	108851205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_108842399_108842903_108842985_108851151
ENSMUST00000197361.5	chr3	-	329	4	FSM	ENSMUSG00000090733.7	ENSMUST00000197361.5	329	4	0	0	0	0	multi-exon	FALSE	canonical	2	296	junction_1	8530.83639249725	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTTGTCTTGTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	90120955	90119977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90120048_90120240_90120352_90120499_90120609_90120916
ENSMUST00000197379.2	chr5	-	645	1	FSM	ENSMUSG00000105044.2	ENSMUST00000197379.2	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGCTACATAGAGAAACC	NA	False	NA	NA	False	NA	NA	NA	109982011	109981366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_109981400_109982000
ENSMUST00000197407.5	chr5	+	3546	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_1	111.175284472544	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTGGTCTGACGCAGT	NA	False	NA	9	True	AATAAA	-18	NA	24890529	24915374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUST00000197407.5-1	chr5	+	2580	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	455	511	0	-511	multi-exon	FALSE	canonical	3	299	junction_1	111.175284472544	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACCACAGCAAGTTAT	NA	False	NA	7	True	ATTAAA	-16	NA	24890984	24914863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUST00000197438.5	chr3	-	1992	8	FSM	ENSMUSG00000038975.15	ENSMUST00000197438.5	1992	8	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_3	212.229275327704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTATATAGCTTTTT	6798	False	NA	0	True	AATAAA	-17	NA	153617948	153612923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616526_153617561
ENSMUST00000197440.5	chr14	-	2278	12	FSM	ENSMUSG00000000958.11	ENSMUST00000197440.5	2278	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	56.5898685556036	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	False	NA	-6	True	AATAAA	-15	NA	54655156	54606900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655113
ENSMUST00000197444.2	chr3	-	1688	1	FSM	ENSMUSG00000104831.2	ENSMUST00000197444.2	1688	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCCCCTCTCTGCCGCA	NA	False	NA	NA	False	NA	NA	NA	54541989	54540301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_54540300_54542000
ENSMUST00000197449.2	chr3	-	3298	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	23.6851087183488	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAGTGTCATGAATTG	10010	False	NA	-4	True	ATTAAA	-15	NA	95726090	95679566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ENSMUST00000197460.5	chr9	-	1930	7	FSM	ENSMUSG00000032494.13	ENSMUST00000197460.5	1290	7	0	-640	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2178.41216383759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_110769888_110771396_110771507_110771597_110771713_110771835_110771898_110772219_110772322_110773258_110773312_110774891
ENSMUST00000197466.5	chr5	-	2972	20	FSM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	165.9658376889	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	8265	False	NA	-12	True	AGTAAA	-18	NA	137305928	137293976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUST00000197477.5	chr7	-	1793	12	FSM	ENSMUSG00000041560.13	ENSMUST00000197477.5	1793	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	561.705652160828	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679675	15671762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679442
ENSMUST00000197478.2	chr5	-	323	1	FSM	ENSMUSG00000104604.2	ENSMUST00000197478.2	323	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATGTGCACTAACAGG	NA	False	NA	NA	False	NA	NA	NA	106503550	106503227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_106503200_106503600
ENSMUST00000197502.5	chr3	+	2751	27	FSM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_20	89.4210256174979	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTACATACCAATCGCAG	NA	False	NA	-92	True	NA	NA	NA	54600227	54636057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUST00000197509.2	chr3	-	443	2	FSM	ENSMUSG00000106223.2	ENSMUST00000197509.2	443	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCCTCTTCAGTCAGGTG	NA	False	NA	-85	True	NA	NA	NA	41477652	41476721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41476891_41477378
ENSMUST00000197513.2	chr5	+	1770	9	FSM	ENSMUSG00000023353.15	ENSMUST00000197513.2	1770	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	22.9115145723717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	False	NA	11	True	AATAAA	-17	NA	24684750	24707035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUST00000197531.2	chr3	-	3708	4	FSM	ENSMUSG00000005813.13	ENSMUST00000197531.2	3708	4	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_2	20.7417989148054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTAAAAGAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	138195159	138181289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_138184692_138186448_138186562_138188827_138188880_138195018
ENSMUST00000197539.5	chr3	+	2515	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	0	0	0	0	multi-exon	FALSE	canonical	2	2193	junction_4	278.873129258131	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	11	True	AATAAA	-12	NA	135144897	135172434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000197554.5	chr5	-	3057	9	FSM	ENSMUSG00000029472.14	ENSMUST00000197554.5	3057	9	0	0	0	0	multi-exon	FALSE	canonical	3	1753	junction_4	164.433117102365	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTGCTCTGTGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	122959342	122938341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000197555.2	chr5	-	935	5	FSM	ENSMUSG00000029617.11	ENSMUST00000197555.2	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_3	58.349700084919	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAATTCTTCCATCGGG	NA	False	NA	NA	False	NA	NA	NA	143951695	143946039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143946105_143947848_143948348_143949620_143949715_143949811_143949910_143951516
ENSMUST00000197565.3	chr13	-	1391	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	324.011659598163	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579904	19541845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
ENSMUST00000197653.5	chr3	+	2652	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	75	3962	-70	3706	multi-exon	FALSE	canonical	3	49	junction_1	1.4142135623731	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGTCAACCGGTTCT	NA	False	NA	NA	False	NA	NA	NA	36205240	36220529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
ENSMUST00000197694.5	chr3	+	2129	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_15	164.164884719601	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4859	False	NA	20	True	ATTAAA	-23	NA	34074256	34123494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUST00000197719.5	chr5	-	2383	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197719.5	2383	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	591.121150732868	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGGTTTTTTTTTATTT	NA	False	NA	-17	True	AATAAA	-22	NA	122959350	122925783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122926082_122926364_122926504_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000197748.5	chr3	+	4183	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_13	66.1683137664235	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTTTCTAACTCTAG	NA	False	NA	NA	False	AATAAA	-25	NA	152052125	152099254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUST00000197762.2	chr5	+	485	2	FSM	ENSMUSG00000106237.2	ENSMUST00000197762.2	485	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGCCCTTCCTGAGAGT	NA	False	NA	NA	False	GATAAA	-45	NA	137508514	137515763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_137508883_137515646
ENSMUST00000197767.5	chr3	-	1092	7	FSM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	640.345588118027	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTAGTCTTGGTTTTGT	7221	False	NA	NA	False	AATAAA	-19	NA	89905973	89902759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834
ENSMUST00000197769.2	chr3	-	5967	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAGAGACAAT	NA	False	NA	NA	False	NA	NA	NA	107240417	107234450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107234400_107240400
ENSMUST00000197786.5	chr3	-	857	6	FSM	ENSMUSG00000027944.14	ENSMUST00000197786.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	742.362876226984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7210	False	NA	NA	False	AATAAA	-16	NA	89905984	89902762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89905108_89905311_89905834
ENSMUST00000197787.5	chr5	-	908	5	FSM	ENSMUSG00000023452.20	ENSMUST00000197787.5	908	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	341.751645936051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGCCCACAGGCCAAACC	7834	False	NA	NA	False	NA	NA	NA	32899819	32895324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_32895491_32895731_32895879_32896125_32896265_32896527_32896718_32899553
ENSMUST00000197833.5	chr3	-	3201	13	FSM	ENSMUSG00000028134.12	ENSMUST00000197833.5	1598	13	-277	-1326	-123	-252	multi-exon	FALSE	canonical	3	11	junction_4	23.7888571020598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	119577160	119512642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ENSMUST00000197859.5	chr3	+	3833	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	0	0	0	0	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTCTTACTCAGTAAT	NA	False	NA	5	True	ATTAAA	-18	NA	135144325	135173959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000197859.5-0	chr3	+	1504	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	189	2140	0	0	multi-exon	FALSE	canonical	2	870	junction_1	657.273775778808	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144514	135171819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000197894.2	chr9	-	773	2	FSM	ENSMUSG00000032491.15	ENSMUST00000197894.2	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCAGGAGATTGAGTTA	8945	False	NA	NA	False	NA	NA	NA	110453499	110451647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_110452304_110453382
ENSMUST00000197928.5	chr9	-	4441	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946898	109913387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ENSMUST00000197928.5-0	chr9	-	4039	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	399	3	0	0	multi-exon	FALSE	canonical	3	162	junction_20	135.338876788039	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946499	109913390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ENSMUST00000197973.2	chr3	+	321	1	FSM	ENSMUSG00000105388.2	ENSMUST00000197973.2	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATTTTGTTATGAAGAC	8301	False	NA	NA	False	NA	NA	NA	145584774	145585095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145584800_145585100
ENSMUST00000197984.5	chr9	+	3538	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_24	83.6874645091864	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCATAGTTCCTGGCTGT	2502	False	NA	16	True	ATTAAA	-26	NA	109961104	110064359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ENSMUST00000198042.5	chr3	+	2567	14	FSM	ENSMUSG00000028060.15	ENSMUST00000198042.5	2567	14	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_11	80.4603618093109	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAGCGAGAAGAGGGAT	3	True	NA	NA	False	AAGAAA	-34	NA	88593133	88619869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
ENSMUST00000198051.5	chr3	+	2127	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_14	198.096296929405	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4856	False	NA	20	True	ATTAAA	-23	NA	34074253	34123494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUST00000198066.5	chr5	+	3201	19	FSM	ENSMUSG00000014668.16	ENSMUST00000198066.5	3201	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	86.3223931292197	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGTTGTACTCCTG	NA	False	NA	19	True	AATAAA	-19	NA	110283743	110319835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUST00000198078.2	chr3	+	2796	14	FSM	ENSMUSG00000028060.15	ENSMUST00000198078.2	1922	14	-23	-851	0	0	multi-exon	FALSE	canonical	2	9	junction_9	104.955555541635	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-10	True	NA	13	True	AATAAA	-14	NA	88593120	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ENSMUST00000198106.2	chr12	+	1420	1	FSM	ENSMUSG00000105928.2	ENSMUST00000198106.2	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGCGCAGTCACCCG	NA	False	NA	NA	False	NA	NA	NA	115856503	115857923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_115856500_115857900
ENSMUST00000198140.5	chr9	+	3488	14	FSM	ENSMUSG00000025648.19	ENSMUST00000198140.5	3488	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	3.73057097014835	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAATATGAGGTGGTATT	NA	False	NA	NA	False	AATAAA	-38	NA	108820845	108861296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUST00000198164.5	chr9	-	4538	10	FSM	ENSMUSG00000054792.16	ENSMUST00000198164.5	4538	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2.46956786343254	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCAGTTTCCTGAT	1963	False	NA	-4	True	AATAAA	-15	NA	110305757	110254995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265317_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
ENSMUST00000198180.5	chr3	+	3849	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	4600.96803991519	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACAATGACAAGGGTCAG	NA	False	NA	NA	False	NA	NA	NA	102927922	102965307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUST00000198192.2	chr3	-	2470	1	FSM	ENSMUSG00000105201.2	ENSMUST00000198192.2	2470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAATAAGCAA	NA	False	NA	NA	False	NA	NA	NA	157742046	157739576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157739600_157742000
ENSMUST00000198201.5	chr9	+	930	6	FSM	ENSMUSG00000032478.15	ENSMUST00000198201.5	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	211.367547177896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAGGCTGGCAGTACT	NA	False	NA	7	True	AATAAA	-14	NA	109661854	109672024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109661876_109662263_109662364_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUST00000198236.2	chr5	-	1062	1	FSM	ENSMUSG00000105429.2	ENSMUST00000198236.2	1062	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAAAGAAAGATAGGAGA	NA	False	NA	NA	False	NA	NA	NA	32958309	32957247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_32957200_32958300
ENSMUST00000198239.2	chr3	-	2953	1	FSM	ENSMUSG00000059743.13	ENSMUST00000198239.2	2953	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	89009198	89006245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89006200_89009200
ENSMUST00000198258.5	chr5	-	1172	6	FSM	ENSMUSG00000015806.13	ENSMUST00000198258.5	1172	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	519.057376404574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATAGGGGTCCTGGAAGA	NA	False	NA	13	True	NA	NA	NA	45607518	45591362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45604917_45605011_45607431
ENSMUST00000198271.5	chr5	+	2335	3	FSM	ENSMUSG00000044134.10	ENSMUST00000198271.5	2335	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	19.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCCACAGTTGATATAT	5413	False	NA	32	True	AATAAA	-43	NA	121987046	121992695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_121987188_121989230_121989343_121990613
ENSMUST00000198274.2	chr5	+	2440	14	FSM	ENSMUSG00000015880.14	ENSMUST00000198274.2	2440	14	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_7	45.647219401112	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTCAGACTCCTTAT	NA	False	NA	13	True	GATAAA	-43	NA	45835256	45857415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ENSMUST00000198279.2	chr3	+	1166	1	FSM	ENSMUSG00000037072.17	ENSMUST00000198279.2	1166	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACACCTAATCTGATTTG	NA	False	NA	NA	False	AATACA	-14	NA	144296185	144297351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_144296200_144297400
ENSMUST00000198311.5	chr3	+	2404	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATCTGCCACCTGAGA	NA	False	NA	NA	False	NA	NA	NA	116388656	116422796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ENSMUST00000198311.5-0	chr3	+	4186	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	4	-1786	0	-71	multi-exon	FALSE	canonical	3	24	junction_15	13.4290671213603	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAAGAAGCATGTTTAG	NA	False	NA	12	True	AATAAA	-23	NA	116388660	116424582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ENSMUST00000198322.5	chr3	-	3385	27	FSM	ENSMUSG00000042520.17	ENSMUST00000198322.5	3385	27	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	317.141774803389	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3567	False	NA	-9	True	AATAAA	-21	NA	89959762	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89907561_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUST00000198331.2	chr5	-	981	1	FSM	ENSMUSG00000105987.5	ENSMUST00000198331.2	981	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTCTAGTCTGAGGTCT	NA	False	NA	NA	False	NA	NA	NA	23904274	23903293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23903300_23904300
ENSMUST00000198332.2	chr3	-	3946	18	FSM	ENSMUSG00000032913.14	ENSMUST00000198332.2	3946	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	20.1729545898912	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGACCTTGTGTGTTGGAT	NA	False	NA	-6	True	CATAAA	-15	NA	104419172	104364443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ENSMUST00000198334.2	chr5	-	520	3	FSM	ENSMUSG00000104529.5	ENSMUST00000198334.2	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCGCCTCCTATTC	3477	False	NA	0	True	AATAAA	-19	NA	143151506	143150533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143150848_143151184_143151305_143151420
ENSMUST00000198350.5	chr3	-	1399	10	FSM	ENSMUSG00000038975.15	ENSMUST00000198350.5	1399	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	303.195735987477	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6182	False	NA	-4	True	AATAAA	-44	NA	153618564	153612927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618550
ENSMUST00000198374.2	chr3	+	1286	1	FSM	ENSMUSG00000106022.2	ENSMUST00000198374.2	1286	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTTGTGTGTATGGGT	NA	False	NA	NA	False	ATTAAA	-18	NA	121221694	121222980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_121221700_121223000
ENSMUST00000198386.5	chr3	+	1894	14	FSM	ENSMUSG00000027959.15	ENSMUST00000198386.5	1894	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	10.1538461538462	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGATGTCTGCAGCATCT	NA	False	NA	NA	False	TATAAA	-22	NA	116388630	116415251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031
ENSMUST00000198389.5	chr3	-	3020	7	FSM	ENSMUSG00000027708.15	ENSMUST00000198389.5	3020	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	72.6989607139531	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGTTAAGGTTGTTC	NA	False	NA	NA	False	TATAAA	-31	NA	35984223	35947654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35984094
ENSMUST00000198415.3	chr5	-	2692	2	FSM	ENSMUSG00000043323.18	ENSMUST00000198415.3	2692	2	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	0	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110581187	110577740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110580012_110580766
ENSMUST00000198425.5	chr9	-	3968	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_20	140.114150629448	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946490	109913387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ENSMUST00000198451.2	chr5	+	1032	6	FSM	ENSMUSG00000049327.18	ENSMUST00000198451.2	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_5	46.3163038248952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGCACACACACACACATAC	6102	False	NA	-81	True	AATGAA	-20	NA	124585261	124598851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUST00000198474.2	chr5	-	2030	4	FSM	ENSMUSG00000053553.12	ENSMUST00000198474.2	2030	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_3	29.698484809835	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGACTTTTTGCCTGTC	NA	False	NA	-6	True	NA	NA	NA	139446282	139345493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139347144_139349727_139349919_139441171_139441302_139446223
ENSMUST00000198479.3	chr13	+	68	1	FSM	ENSMUSG00000105904.3	ENSMUST00000198479.3	68	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAGCCCTTGAGCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	63449021	63449089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_63449000_63449100
ENSMUST00000198513.6	chr3	-	1146	7	FSM	ENSMUSG00000028029.12	ENSMUST00000198513.6	1146	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	349.626785142227	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTTTGATTCGTCT	NA	False	NA	2	True	TATAAA	-20	NA	132389883	132366241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389789
ENSMUST00000198515.5	chr3	-	2114	11	FSM	ENSMUSG00000027709.10	ENSMUST00000198515.5	2114	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	16.8059513268366	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCTCTCTCTCTG	3493	False	NA	NA	False	AATAAA	-15	NA	36050028	36027528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929
ENSMUST00000198526.5	chr5	-	3001	19	FSM	ENSMUSG00000037364.13	ENSMUST00000198526.5	3001	19	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	246.227361558879	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAACTGTGTGCTGTA	8510	False	NA	-14	True	AGTAAA	-16	NA	137305683	137293978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298010_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307
ENSMUST00000198533.2	chr9	-	1493	1	FSM	ENSMUSG00000106495.2	ENSMUST00000198533.2	1493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	109403292	109401799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109401800_109403300
ENSMUST00000198540.2	chr3	-	2043	1	FSM	ENSMUSG00000105572.2	ENSMUST00000198540.2	2043	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAGAATATAAGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	119523439	119521396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_119521400_119523400
ENSMUST00000198579.2	chr5	+	558	1	FSM	ENSMUSG00000105373.2	ENSMUST00000198579.2	558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGCTCCCAATAAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	44291734	44292292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_44291700_44292300
ENSMUST00000198582.5	chr5	-	1508	4	FSM	ENSMUSG00000105402.5	ENSMUST00000198582.5	2879	4	0	1371	0	0	multi-exon	FALSE	canonical	3	10	junction_2	4.89897948556636	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGTGAATCATTCACA	NA	False	NA	NA	False	AATAAA	-14	NA	64768043	64752570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_64753667_64759324_64759493_64767442_64767499_64767855
ENSMUST00000198588.2	chr5	-	1591	1	FSM	ENSMUSG00000104913.2	ENSMUST00000198588.2	1591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGCCCTCTGGAGCCCC	905	False	NA	NA	False	NA	NA	NA	22931166	22929575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_22929600_22931200
ENSMUST00000198599.2	chr3	+	4102	25	FSM	ENSMUSG00000037400.18	ENSMUST00000198599.2	4102	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	120.352578100993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGTTGTTGCATGTTA	NA	False	NA	9	True	AATAAA	-15	NA	35843754	35910423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35895178_35895265_35903582_35903714_35909253
ENSMUST00000198607.5	chr13	-	4750	13	FSM	ENSMUSG00000034575.14	ENSMUST00000198607.5	4750	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	10.3077640640442	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTTCCTCTGAAGGGTG	NA	False	NA	-13	True	AATAAA	-15	NA	69682736	69646077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ENSMUST00000198610.2	chr3	-	3762	5	FSM	ENSMUSG00000032854.13	ENSMUST00000198610.2	3762	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.74165738677394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTTGGAATAAAATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	125709534	125659154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_125661229_125665233_125665454_125667797_125667875_125669137_125669281_125708286
ENSMUST00000198626.2	chr3	-	1598	1	FSM	ENSMUSG00000074238.7	ENSMUST00000198626.2	1598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCATTAGGTTATGC	NA	False	NA	-8	True	AATAAA	-16	NA	127602513	127600915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_127600900_127602500
ENSMUST00000198633.5	chr5	+	2623	17	FSM	ENSMUSG00000014668.16	ENSMUST00000198633.5	2623	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	84.7737568104068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCCTGCTGAAACTCCA	NA	False	NA	NA	False	NA	NA	NA	110283722	110319525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUST00000198676.2	chr5	-	1820	2	FSM	ENSMUSG00000106634.2	ENSMUST00000198676.2	1820	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTATAGCATTGGAAATG	NA	False	NA	NA	False	NA	NA	NA	59731585	59727044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_59727183_59729903
ENSMUST00000198699.2	chr3	+	1080	1	FSM	ENSMUSG00000069014.5	ENSMUST00000198699.2	1080	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACAGAAACGGCTAC	5462	False	NA	NA	False	NA	NA	NA	54388880	54389960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_54388900_54390000
ENSMUST00000198740.5	chr3	-	2167	3	FSM	ENSMUSG00000028106.14	ENSMUST00000198740.5	2167	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	39.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCAGAGTTTGTCATTT	3778	False	NA	NA	False	AATAAA	-25	NA	95684092	95677868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95679509_95681423_95681685_95683826
ENSMUST00000198748.5	chr3	+	1548	9	FSM	ENSMUSG00000078578.10	ENSMUST00000198748.5	787	9	0	-761	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1137.45118027105	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144514	135171819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135162361_135162406_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000198768.3	chr5	-	3934	18	FSM	ENSMUSG00000043323.18	ENSMUST00000198768.3	3934	18	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_9	64.5158171105307	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTTCTGCCTTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	110596468	110510435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ENSMUST00000198782.2	chr3	-	855	7	FSM	ENSMUSG00000027944.14	ENSMUST00000198782.2	855	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	657.328853940113	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCTTAAACAGAGGCCTT	7498	False	NA	NA	False	NA	NA	NA	89905696	89902931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905631
ENSMUST00000198811.2	chr5	+	1237	4	FSM	ENSMUSG00000037905.14	ENSMUST00000198811.2	745	4	-123	-369	59	369	multi-exon	FALSE	canonical	3	17	junction_2	166.423823080979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGCTTTGAAGGGAACG	NA	False	NA	29	True	AATAAA	-21	NA	125518690	125532159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_125518957_125528733_125528837_125529211_125529310_125531389
ENSMUST00000198834.2	chr5	-	2571	14	FSM	ENSMUSG00000043323.18	ENSMUST00000198834.2	2571	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	45.448455751296	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGTCACTGGGAAAAATT	NA	False	NA	NA	False	NA	NA	NA	110534828	110510765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526759_110526981_110527134_110527460_110529466_110529513_110534766
ENSMUST00000198856.2	chr3	-	2661	2	FSM	ENSMUSG00000106334.2	ENSMUST00000198856.2	2661	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTAAAAAACCTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	55490151	55485525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_55488026_55489990
ENSMUST00000198878.2	chr3	+	2050	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	7.78888096369861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTATTTCCGTTTAT	NA	False	NA	NA	False	NA	NA	NA	159545373	159644300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
ENSMUST00000198951.2	chr5	-	1114	2	FSM	ENSMUSG00000029213.12	ENSMUST00000198951.2	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTTGCTTGATTTC	NA	False	NA	-4	True	AATACA	-14	NA	72318481	72316353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_72317237_72318250
ENSMUST00000198960.2	chr5	-	812	5	FSM	ENSMUSG00000033467.13	ENSMUST00000198960.2	812	5	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_3	269.602021505774	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAATGCGGCCAGCCATC	NA	False	NA	-13	True	NA	NA	NA	109704339	109702580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_109702937_109703138_109703224_109703372_109703527_109703884_109704048_109704285
ENSMUST00000198965.5	chr5	+	3536	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	15.8934601684016	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTTGGTTGTCTT	NA	False	NA	11	True	AATAAA	-15	NA	88712898	88799251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ENSMUST00000198968.2	chr3	+	2916	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_15	114.842266146876	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474460	37633245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
ENSMUST00000198981.3	chr5	-	3456	1	FSM	ENSMUSG00000037822.13	ENSMUST00000198981.3	3456	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTAGTTTAAGTGCTC	NA	False	NA	NA	False	NA	NA	NA	65650743	65647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65647300_65650700
ENSMUST00000198984.5	chr5	-	345	4	FSM	ENSMUSG00000105987.5	ENSMUST00000198984.5	345	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	6.68331255192114	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGGAGTCTTGTGAT	5261	False	NA	NA	False	NA	NA	NA	23917660	23905225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_23905472_23915363_23915407_23916113_23916149_23917639
ENSMUST00000199014.5	chr3	-	1280	6	FSM	ENSMUSG00000027944.14	ENSMUST00000199014.5	1280	6	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_4	119.761429517186	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGTCTTAGTCTTGGTT	7201	False	NA	NA	False	AATAAA	-15	NA	89905993	89902763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89905311_89905834
ENSMUST00000199033.5	chr3	+	1127	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	0	0	0	0	multi-exon	TRUE	canonical	3	509	junction_1	98.0487633782293	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281959	145309868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUST00000199048.5	chr5	-	3532	24	FSM	ENSMUSG00000062234.15	ENSMUST00000199048.5	3532	24	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_22	75.7511097200465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGGAACTTGCCAGAGA	NA	False	NA	NA	False	NA	NA	NA	108777621	108719296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108772895_108772958_108777366
ENSMUST00000199070.5	chr3	-	5991	8	FSM	ENSMUSG00000032913.14	ENSMUST00000199070.5	5991	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	41.1527765820019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTGGTCTTCTCTTGC	NA	False	NA	-21	True	AATAAA	-15	NA	104419144	104361296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104418771
ENSMUST00000199072.2	chr3	-	1731	1	FSM	ENSMUSG00000106019.2	ENSMUST00000199072.2	1731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTGTTGTTGTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	22130306	22128575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_22128600_22130300
ENSMUST00000199100.5	chr6	+	1383	4	FSM	ENSMUSG00000039419.18	ENSMUST00000199100.5	6279	4	0	4896	0	-257	multi-exon	FALSE	canonical	3	21	junction_1	8.01387685344754	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTGTTTTTTATTGA	NA	False	NA	3	True	AATAAA	-16	NA	47221320	47276247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_47221484_47248073_47248314_47273652_47273734_47275348
ENSMUST00000199113.5	chr3	-	2934	19	FSM	ENSMUSG00000027709.10	ENSMUST00000199113.5	2934	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	79.4384613131603	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	36054758	36013460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018630_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043981_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ENSMUST00000199139.2	chr5	+	1252	1	FSM	ENSMUSG00000105954.2	ENSMUST00000199139.2	1252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAACTACGACCATGA	NA	False	NA	NA	False	CATAAA	-10	NA	104582986	104584238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_104583000_104584200
ENSMUST00000199153.2	chr14	+	856	1	FSM	ENSMUSG00000010406.13	ENSMUST00000199153.2	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54664378	54665234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54664400_54665200
ENSMUST00000199155.2	chr3	-	2161	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	41447625	41442113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41444172_41447522
ENSMUST00000199155.2-1	chr3	-	1099	2	FSM	ENSMUSG00000097639.3	ENSMUST00000199155.2	2161	2	0	1062	0	63	multi-exon	FALSE	canonical	3	87	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGTCAATTTTTAAA	NA	False	NA	60	True	NA	NA	NA	41447625	41443175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41444172_41447522
ENSMUST00000199164.2	chr3	+	4659	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	10.5	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322140	58369141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_58325035_58366751_58366804_58367428
ENSMUST00000199188.5	chr3	+	2214	6	FSM	ENSMUSG00000053931.12	ENSMUST00000199188.5	2214	6	0	0	0	0	multi-exon	FALSE	canonical	3	4363	junction_2	396.918329130817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAACCACAGGCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	121220193	121251848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_121220478_121243597_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ENSMUST00000199195.3	chr14	+	463	4	FSM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	1331	junction_1	96.858430482615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGACTCTCTCTGGCTT	NA	False	NA	20	True	AATAAA	-21	NA	54664386	54667206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUST00000199222.5	chr3	+	2438	12	FSM	ENSMUSG00000027677.18	ENSMUST00000199222.5	2438	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	51.4495660937939	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGGCTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	33854361	33863826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33862004_33862098_33862834
ENSMUST00000199243.5	chr5	-	2988	20	FSM	ENSMUSG00000037364.13	ENSMUST00000199243.5	2988	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	194.772841622735	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8265	False	NA	-8	True	AGTAAA	-22	NA	137305928	137293972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUST00000199273.2	chr3	-	1576	2	FSM	ENSMUSG00000050549.9	ENSMUST00000199273.2	2234	2	36	622	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGATATTTTTGATTTTC	2610	False	NA	NA	False	AATACA	-20	NA	127689937	127663328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_127664650_127689682
ENSMUST00000199278.3	chr13	-	1074	8	FSM	ENSMUSG00000003062.14	ENSMUST00000199278.3	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_7	61.3454587245254	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATCCCTGCCTGCGGC	NA	False	NA	NA	False	NA	NA	NA	19579925	19542170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUST00000199282.2	chr5	-	3656	1	FSM	ENSMUSG00000105247.2	ENSMUST00000199282.2	3656	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCAGAAAGTGCTGGCC	NA	False	NA	NA	False	NA	NA	NA	45404649	45400993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_45401000_45404600
ENSMUST00000199300.5	chr3	+	4118	19	FSM	ENSMUSG00000053819.17	ENSMUST00000199300.5	5524	19	-9	1415	0	0	multi-exon	TRUE	canonical	2	3	junction_9	3.34119443416775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTGTCCATTTTTATT	NA	False	NA	7	True	AATAAA	-17	NA	126390646	126638560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ENSMUST00000199317.2	chr3	+	743	4	FSM	ENSMUSG00000087260.6	ENSMUST00000199317.2	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_2	64.8194072447099	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTCATTTCTGGTCT	3151	False	NA	12	True	AATAAA	-16	NA	107186314	107191398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ENSMUST00000199322.5	chr5	+	4157	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	175.330402383614	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAGACTCTTTGTTTTGA	1331	False	NA	15	True	NA	NA	NA	145168564	145184111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
ENSMUST00000199346.2	chr3	+	1300	1	FSM	ENSMUSG00000028093.16	ENSMUST00000199346.2	1300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCACCCCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	97066411	97067711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97066400_97067700
ENSMUST00000199374.5	chr5	-	3372	13	FSM	ENSMUSG00000046985.12	ENSMUST00000199374.5	3372	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	23.6447962327631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGAATTTCTTGTGG	NA	False	NA	0	True	AATAAA	-27	NA	44383959	44332500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44383755
ENSMUST00000199406.5	chr5	-	2413	17	FSM	ENSMUSG00000029472.14	ENSMUST00000199406.5	2413	17	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	528.705609099951	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959343	122925789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122926082_122926364_122926528_122929670_122929799_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000199412.5	chr5	+	3439	18	FSM	ENSMUSG00000034573.15	ENSMUST00000199412.5	3439	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	14.0972892434624	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	103573057	103689300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671435_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
ENSMUST00000199418.2	chr3	+	1778	1	FSM	ENSMUSG00000104546.2	ENSMUST00000199418.2	1778	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATAATTGGAGAGAG	NA	False	NA	NA	False	AATAGA	-27	NA	152091896	152093674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152091900_152093700
ENSMUST00000199462.5	chr3	-	5963	12	FSM	ENSMUSG00000028136.16	ENSMUST00000199462.5	2510	12	130	-3583	0	0	multi-exon	FALSE	canonical	0	0	junction_11	66.0204075636923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTTTCCTAGACTA	NA	False	NA	-2	True	AATAAA	-21	NA	94489856	94404850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489682
ENSMUST00000199518.2	chr5	+	720	3	FSM	ENSMUSG00000029326.14	ENSMUST00000199518.2	720	3	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGTCTAAAGAGAGATG	NA	False	NA	NA	False	NA	NA	NA	100187926	100209215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100188162_100206998_100207101_100208832
ENSMUST00000199523.2	chr3	+	696	1	FSM	ENSMUSG00000027677.18	ENSMUST00000199523.2	696	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GAAAAAAAAAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	33854323	33855019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_33854300_33855000
ENSMUST00000199529.5	chr9	-	4373	22	FSM	ENSMUSG00000032480.18	ENSMUST00000199529.5	4373	22	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_20	127.405044450657	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946501	109913387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944651_109946425
ENSMUST00000199531.5	chr3	-	1592	10	FSM	ENSMUSG00000037062.14	ENSMUST00000199531.5	2584	10	-225	1217	0	0	multi-exon	TRUE	canonical	2	5	junction_1	102.941671126522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATAAATAGTTACTCAT	NA	False	NA	NA	False	ATTAAA	-20	NA	144426096	144390655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_144390901_144397218_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ENSMUST00000199552.2	chr3	+	1192	1	FSM	ENSMUSG00000106553.2	ENSMUST00000199552.2	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGAGAAAAGACCAAAAC	NA	False	NA	NA	False	NA	NA	NA	58434350	58435542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_58434400_58435500
ENSMUST00000199592.5	chr9	+	1304	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGGAGGTTGTCTTT	2182	False	NA	7	True	AATAAA	-17	NA	110134240	110150391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUST00000199592.5-0	chr9	+	2052	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	31	-779	0	0	multi-exon	FALSE	canonical	3	125	junction_6	18.4157239577729	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGATTGTGTGTGTGTTCCT	2213	False	NA	6	True	AATAAA	-14	NA	110134271	110151170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUST00000199613.5	chr3	+	738	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	0	0	0	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTACTGTTCCTTTTT	NA	False	NA	-4	True	AATAAA	-3	NA	135144076	135171047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000199613.5-0	chr3	+	1449	8	FSM	ENSMUSG00000078578.10	ENSMUST00000199613.5	738	8	61	-772	61	0	multi-exon	FALSE	canonical	2	236	junction_1	865.692126071883	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144137	135171819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135144194_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUST00000199633.2	chr3	-	643	3	FSM	ENSMUSG00000106223.2	ENSMUST00000199633.2	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	18	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACTTGTTTAACTATT	NA	False	NA	-2	True	AATAAA	-27	NA	41482909	41476638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_41476891_41477364_41477680_41482833
ENSMUST00000199647.2	chr5	+	2305	9	FSM	ENSMUSG00000023353.15	ENSMUST00000199647.2	1061	9	-388	-856	-231	0	multi-exon	FALSE	canonical	3	38	junction_8	47.1665930505904	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTCTTGGTTCCTTCCCG	NA	False	NA	15	True	AATAAA	-15	NA	24656943	24688182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24687263
ENSMUST00000199666.5	chr5	+	1953	11	FSM	ENSMUSG00000058503.12	ENSMUST00000199666.5	1450	11	-5	-498	0	0	multi-exon	FALSE	canonical	0	0	junction_10	76.7604064606227	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTCTTTGTGTATC	NA	False	NA	19	True	AGTAAA	-15	NA	3593832	3620238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609137_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ENSMUST00000199680.2	chr3	-	2321	1	FSM	ENSMUSG00000040151.10	ENSMUST00000199680.2	2321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	144275919	144273598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_144273600_144275900
ENSMUST00000199684.5	chr3	+	3636	13	FSM	ENSMUSG00000028060.15	ENSMUST00000199684.5	3636	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_11	83.5129730441125	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	3	True	NA	13	True	AATAAA	-14	NA	88593133	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617164_88617250_88618067
ENSMUST00000199689.2	chr14	+	429	3	FSM	ENSMUSG00000010406.13	ENSMUST00000199689.2	429	3	0	0	0	0	multi-exon	FALSE	canonical	3	1524	junction_2	11.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCCAGACTCTCTCTGG	NA	False	NA	17	True	AATAAA	-18	NA	54664496	54667203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54664696_54666040_54666106_54667038
ENSMUST00000199692.2	chr5	+	1277	4	FSM	ENSMUSG00000029439.15	ENSMUST00000199692.2	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	11.1455023315337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129637222	129648448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129637870_129646704_129646879_129647539_129647613_129648065
ENSMUST00000199727.5	chr3	+	3426	12	FSM	ENSMUSG00000039988.15	ENSMUST00000199727.5	3426	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	98.369517552294	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTGAGCCATCTCTCC	NA	False	NA	NA	False	NA	NA	NA	157652875	157713065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUST00000199735.5	chr3	-	2508	7	FSM	ENSMUSG00000027881.15	ENSMUST00000199735.5	2508	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	184.380418941082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTGGGAGAGGGCGGGG	7109	False	NA	NA	False	ATTAAA	-40	NA	108818784	108810462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815641_108815721_108818479
ENSMUST00000199736.2	chr9	+	2107	4	FSM	ENSMUSG00000032482.10	ENSMUST00000199736.2	2107	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	9.53356643071673	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTAGTGCCGTGGCC	NA	False	NA	19	True	AATAAA	-20	NA	110075132	110091643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110076459_110080026_110080216_110085212_110085289_110091127
ENSMUST00000199742.2	chr3	-	1570	1	FSM	ENSMUSG00000055436.19	ENSMUST00000199742.2	1570	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157737391	157735821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157735800_157737400
ENSMUST00000199754.5	chr3	+	7438	11	FSM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3.87814388593306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGACTTGTGTTTTAG	NA	False	NA	11	True	AATAAA	-23	NA	90200484	90270714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ENSMUST00000199754.5-0	chr3	+	5634	11	FSM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	6	1798	0	-1798	multi-exon	FALSE	canonical	3	14	junction_1	3.87814388593306	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACTGTGTTATGTCATT	NA	False	NA	NA	False	NA	NA	NA	90200490	90268916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ENSMUST00000199763.2	chr5	-	1569	6	FSM	ENSMUSG00000040351.12	ENSMUST00000199763.2	1569	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	15.4324333790883	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTTAGTTTATAGTATA	NA	False	NA	NA	False	AATAAA	-16	NA	3852787	3783679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ENSMUST00000199798.5	chr5	+	1789	7	FSM	ENSMUSG00000049327.18	ENSMUST00000199798.5	1789	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	269.798330033544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATCAAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-14	NA	124578029	124599574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124578079_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUST00000199798.5-0	chr5	+	2586	7	FSM	ENSMUSG00000049327.18	ENSMUST00000199798.5	1789	7	0	-797	0	0	multi-exon	FALSE	canonical	3	73	junction_1	269.798330033544	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	NA	False	NA	29	True	AATAAA	-38	NA	124578029	124600371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124578079_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUST00000199799.2	chr5	-	705	1	FSM	ENSMUSG00000105349.2	ENSMUST00000199799.2	705	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTAAATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	136150524	136149819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_136149800_136150500
ENSMUST00000199808.5	chr5	-	10161	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGTGGTGTTGTG	NA	False	NA	43	True	AATAAA	-15	NA	124563673	124506770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ENSMUST00000199808.5-0	chr5	-	5707	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	0	4454	0	1370	multi-exon	FALSE	canonical	3	126	junction_29	101.260073560108	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563673	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ENSMUST00000199809.5	chr7	-	5289	15	FSM	ENSMUSG00000078671.12	ENSMUST00000199809.5	5289	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	8.40917865872082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTACTTTTTTGATTC	NA	False	NA	-9	True	ATTAAA	-19	NA	73118335	73076441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_73079749_73085482_73085727_73091333_73091548_73093982_73094083_73096882_73097062_73098904_73099040_73101446_73101588_73102846_73102976_73104076_73104200_73104438_73104552_73105238_73105390_73105521_73105661_73113383_73113524_73114095_73114138_73118203
ENSMUST00000199829.2	chr5	+	2655	1	FSM	ENSMUSG00000104665.2	ENSMUST00000199829.2	2655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45817408	45820063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_45817400_45820100
ENSMUST00000199834.5	chr3	-	3494	26	FSM	ENSMUSG00000042520.17	ENSMUST00000199834.5	3494	26	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_21	230.048746138726	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUST00000199838.2	chr5	+	347	2	FSM	ENSMUSG00000029414.12	ENSMUST00000199838.2	347	2	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACCCGTGTCTTCTTAG	NA	False	NA	NA	False	NA	NA	NA	123887778	123892123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_123887888_123891885
ENSMUST00000199852.2	chr5	+	793	1	FSM	ENSMUSG00000104699.2	ENSMUST00000199852.2	793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTCTAGGAGACATGC	NA	False	NA	NA	False	NA	NA	NA	3925361	3926154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_3925400_3926200
ENSMUST00000199875.2	chr5	-	1868	3	FSM	ENSMUSG00000029427.12	ENSMUST00000199875.2	1868	3	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGTTTAATAAATTAG	NA	False	NA	-38	True	AATAAA	-20	NA	123841481	123837861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_123839186_123840625_123840744_123841055
ENSMUST00000199878.5	chr3	+	2648	13	FSM	ENSMUSG00000028032.14	ENSMUST00000199878.5	2648	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8531484588242	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGTTTGTGTGCATA	NA	False	NA	6	True	AATAAA	-17	NA	131270656	131349431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_131270745_131273262_131273440_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUST00000199880.2	chr5	-	761	2	FSM	ENSMUSG00000061898.11	ENSMUST00000199880.2	761	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCACGGTGGGAAGGGC	NA	False	NA	NA	False	NA	NA	NA	143166487	143164720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_143165298_143166303
ENSMUST00000199887.2	chr5	+	3398	1	FSM	ENSMUSG00000029439.15	ENSMUST00000199887.2	3398	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAAATATTTGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	129578309	129581707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129578300_129581700
ENSMUST00000199909.2	chr5	-	693	3	FSM	ENSMUSG00000001467.6	ENSMUST00000199909.2	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_2	72	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTGGAAAGAAACCATG	NA	False	NA	NA	False	AAGAAA	-15	NA	4154421	4151048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_4151355_4152927_4153027_4154133
ENSMUST00000199910.5	chr3	+	2610	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	129326003	129428620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUST00000199910.5-0	chr3	+	6001	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	133	-3524	102	0	multi-exon	FALSE	canonical	3	229	junction_1	79.2001683499894	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTCTAGTTCTTTGTTG	NA	False	NA	17	True	AATAAA	-25	NA	129326136	129432144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUST00000199915.2	chr3	+	2740	1	FSM	ENSMUSG00000105692.2	ENSMUST00000199915.2	2740	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTTCTACCCTTATG	1022	False	NA	NA	False	ATTAAA	-8	NA	89117731	89120471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89117700_89120500
ENSMUST00000199942.5	chr5	-	6273	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCTTTGATCTCTGGTC	NA	False	NA	NA	False	AATAAA	-18	NA	52723645	52690858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
ENSMUST00000199942.5-0	chr5	-	2006	8	FSM	ENSMUSG00000039252.12	ENSMUST00000199942.5	6273	8	-78	4345	-78	-4345	multi-exon	FALSE	canonical	3	32	junction_6	6.36636570147348	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCTCAGAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	52723723	52695203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52721307_52721380_52723259
ENSMUST00000199950.2	chr5	-	1200	1	FSM	ENSMUSG00000104705.2	ENSMUST00000199950.2	1200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATCGGTTTTCAGCCT	NA	False	NA	NA	False	NA	NA	NA	113469519	113468319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113468300_113469500
ENSMUST00000200005.5	chr9	+	1126	7	FSM	ENSMUSG00000032478.15	ENSMUST00000200005.5	719	7	38	-445	0	0	multi-exon	FALSE	canonical	3	252	junction_1	126.972000413039	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661854	109672042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109661957_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUST00000200022.2	chr5	-	2630	1	FSM	ENSMUSG00000104563.2	ENSMUST00000200022.2	2630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAATCAGGAAGTATT	NA	False	NA	NA	False	NA	NA	NA	60113483	60110853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_60110900_60113500
ENSMUST00000200039.5	chr5	+	1251	5	FSM	ENSMUSG00000007812.17	ENSMUST00000200039.5	1765	5	40	474	0	0	multi-exon	FALSE	canonical	3	46	junction_3	167.334059593377	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTACTTTTTGTAG	1331	False	NA	NA	False	AATACA	-16	NA	145168564	145174658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859
ENSMUST00000200053.2	chr9	+	4303	2	FSM	ENSMUSG00000046785.9	ENSMUST00000200053.2	578	2	-2173	-1552	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTTTGTCTTTCAG	NA	False	NA	13	True	NA	NA	NA	111100996	111108161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_111103596_111106457
ENSMUST00000200058.5	chr5	-	1174	7	FSM	ENSMUSG00000029472.14	ENSMUST00000200058.5	1174	7	0	0	0	0	multi-exon	FALSE	canonical	3	1753	junction_2	189.823382823789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATTTTATTTTTAAAA	NA	False	NA	NA	False	AAGAAA	-6	NA	122959081	122943906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000200069.5	chr3	+	4365	6	FSM	ENSMUSG00000027852.15	ENSMUST00000200069.5	831	6	-19	-3515	0	0	multi-exon	FALSE	canonical	3	47	junction_5	301.169453962383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCTACTGCCATAGGG	NA	False	NA	26	True	AATAAA	-28	NA	102965663	102975230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971549
ENSMUST00000200082.5	chr10	-	3439	14	FSM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_13	111.384031022692	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	9981	False	NA	-46	True	AATAAA	-14	NA	80512127	80501160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ENSMUST00000200097.5	chr3	-	3777	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	15.6821233920295	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCTGTTCCTTTTTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	119577453	119512390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ENSMUST00000200100.2	chr3	+	1511	6	FSM	ENSMUSG00000028156.13	ENSMUST00000200100.2	729	6	-11	-771	0	231	multi-exon	FALSE	canonical	3	31	junction_2	769.465528792551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCTTTTAGACAACTA	NA	False	NA	12	True	AATAAA	-13	NA	138233045	138262206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_138233076_138252081_138252189_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ENSMUST00000200109.5	chr5	-	2570	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	-49	230	0	-214	multi-exon	TRUE	canonical	3	10	junction_2	25.1434992702996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTTTTTTTTAA	4650	False	NA	NA	False	NA	NA	NA	122917445	122871480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ENSMUST00000200140.2	chr9	-	2019	1	FSM	ENSMUSG00000104988.2	ENSMUST00000200140.2	2019	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGTTGCAGCATCGTT	NA	False	NA	NA	False	NA	NA	NA	110083212	110081193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_110081200_110083200
ENSMUST00000200143.2	chr5	-	1460	1	FSM	ENSMUSG00000097640.8	ENSMUST00000200143.2	1460	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGTTCAATTGTTTTA	154	False	NA	NA	False	AATAAA	-14	NA	64961179	64959719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_64959700_64961200
ENSMUST00000200155.2	chr3	+	210	1	FSM	ENSMUSG00000106628.2	ENSMUST00000200155.2	210	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGCTACATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	134063052	134063262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_134063100_134063300
ENSMUST00000200157.5	chr5	+	3071	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCTCGTCTCACTTT	4055	False	NA	NA	False	AATAAA	-23	NA	136937003	136944258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
ENSMUST00000200157.5-0	chr5	+	910	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	0	2161	0	62	multi-exon	FALSE	canonical	3	57	junction_4	11.0989864402116	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTAGCACTGTGTTTT	4055	False	NA	5	True	NA	NA	NA	136937003	136942097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
ENSMUST00000200164.5	chr3	-	4704	10	FSM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-146	2940	0	-2940	multi-exon	FALSE	canonical	3	28	junction_2	34.4318973563113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACGTGCAATGTTGGGG	10010	False	NA	-10	True	AATAAA	-19	NA	95726090	95670592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
ENSMUST00000200172.2	chr5	+	328	3	FSM	ENSMUSG00000029521.8	ENSMUST00000200172.2	328	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	11	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACAGTATCAGGGTTCG	9178	False	NA	NA	False	NA	NA	NA	110987844	110989199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_110987915_110988276_110988407_110989071
ENSMUST00000200186.5	chr5	-	2375	14	FSM	ENSMUSG00000029169.12	ENSMUST00000200186.5	2375	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	209.215072940651	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTCAATCCAAGGAATAT	NA	False	NA	NA	False	NA	NA	NA	52347719	52308034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314912_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ENSMUST00000200209.5	chr3	-	1169	9	FSM	ENSMUSG00000038975.15	ENSMUST00000200209.5	1169	9	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_3	165.057565715722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTACTGCTGTATTT	7028	False	NA	NA	False	NA	NA	NA	153617718	153613208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561
ENSMUST00000200236.2	chr3	-	1716	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTATGGACAGCAGT	NA	False	NA	NA	False	NA	NA	NA	131096849	131086936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
ENSMUST00000200237.5	chr9	+	3078	25	FSM	ENSMUSG00000032481.18	ENSMUST00000200237.5	3078	25	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_24	84.427936069105	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTGATTTTTTTTGTT	2502	False	NA	NA	False	ATTAAA	-14	NA	109961104	110042931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576
ENSMUST00000200284.5	chr5	-	1405	8	FSM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	232.416937104552	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109706802	109702574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705616_109706670
ENSMUST00000200293.2	chr5	-	976	3	FSM	ENSMUSG00000043323.18	ENSMUST00000200293.2	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_2	98.5	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGGTCAGCGTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	110596369	110579860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110580012_110580766_110580968_110595745
ENSMUST00000200298.2	chr5	+	2632	11	FSM	ENSMUSG00000050017.12	ENSMUST00000200298.2	2632	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	361.683231571495	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478672	111536225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111494985_111494994_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUST00000200299.2	chr5	-	3581	28	FSM	ENSMUSG00000029512.12	ENSMUST00000200299.2	3581	28	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	217.248929557064	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGCTGCCAGCCAACTC	NA	False	NA	NA	False	NA	NA	NA	110957919	110933959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ENSMUST00000200305.2	chr3	-	546	4	FSM	ENSMUSG00000090733.7	ENSMUST00000200305.2	546	4	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_3	8789.54951443285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTTTGTCTTGTTTAA	NA	False	NA	-6	True	AATAAA	-15	NA	90120930	90119977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120687
ENSMUST00000200323.3	chr13	-	1128	8	FSM	ENSMUSG00000003062.14	ENSMUST00000200323.3	1128	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	267.855352374968	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCATGCCCCTGCTTT	NA	False	NA	-3	True	AATAAA	-18	NA	19579904	19549125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_19549516_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUST00000200332.5	chr5	-	6572	21	FSM	ENSMUSG00000042249.12	ENSMUST00000200332.5	4455	21	0	-2117	0	0	multi-exon	FALSE	canonical	1	4	junction_18	18.223885425452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTTGAGGCTGACATC	539	False	NA	-4	True	AATAAA	-18	NA	113163380	113058347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113062941_113063915_113064030_113066691_113066829_113067873_113068037_113071814_113071911_113073261_113073329_113076521_113076623_113077538_113077606_113085574_113085683_113089498_113089594_113092783_113092915_113094452_113094532_113101691_113101792_113103029_113103122_113105180_113105233_113109452_113109515_113114777_113114853_113117033_113117175_113121372_113121447_113133630_113133708_113163232
ENSMUST00000200392.5	chr3	+	3014	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAAGCAGTTTTTAATA	4859	False	NA	15	True	ATTAAA	-16	NA	34074256	34124471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUST00000200392.5-0	chr3	+	2047	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	-10	977	0	0	multi-exon	FALSE	canonical	3	506	junction_15	191.49767622611	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4849	False	NA	20	True	ATTAAA	-23	NA	34074246	34123494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUST00000200393.5	chr5	-	7070	47	FSM	ENSMUSG00000029547.11	ENSMUST00000200393.5	7070	47	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	54.456278746312	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	False	NA	-12	True	AATGAA	-16	NA	139761393	139737039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ENSMUST00000200397.5	chr3	-	2907	5	FSM	ENSMUSG00000052544.10	ENSMUST00000200397.5	8169	5	61	5201	0	1899	multi-exon	FALSE	canonical	3	78	junction_2	13.3674043852949	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	153430750	152909103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_152911229_152912254_152912363_153117098_153117509_153214939_153215135_153430681
ENSMUST00000200409.5	chr3	-	2580	9	FSM	ENSMUSG00000074238.7	ENSMUST00000200409.5	2580	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	148.476376487979	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATCATGGCTTCATAA	NA	False	NA	-11	True	AATAAA	-21	NA	127631172	127600655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ENSMUST00000200426.2	chr9	+	998	1	FSM	ENSMUSG00000032481.18	ENSMUST00000200426.2	998	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAAACAGATGTCTGG	1048	False	NA	NA	False	AATAAA	-15	NA	110065461	110066459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110065500_110066500
ENSMUST00000200436.2	chr3	-	1624	4	FSM	ENSMUSG00000028039.12	ENSMUST00000200436.2	742	4	0	-882	0	-583	multi-exon	FALSE	canonical	3	11	junction_1	91.0103779186137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGAGTGTGTGTGGTTT	9267	False	NA	NA	False	AATAAA	-14	NA	89230194	89221788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_89222875_89223376_89223443_89223769_89224060_89230012
ENSMUST00000200439.2	chr3	+	3753	26	FSM	ENSMUSG00000027751.14	ENSMUST00000200439.2	3753	26	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_19	108.108641652737	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600533	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUST00000200445.5	chr3	+	3028	22	FSM	ENSMUSG00000037400.18	ENSMUST00000200445.5	3028	22	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_21	105.101268517516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTCTTTGTGGTTTCTA	NA	False	NA	NA	False	AATAAA	-19	NA	35808282	35883837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35883565
ENSMUST00000200460.5	chr9	+	2910	10	FSM	ENSMUSG00000044791.17	ENSMUST00000200460.5	2910	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	29.7462519684891	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGAATGTGTGCTCCCTC	NA	False	NA	13	True	AATAAA	-14	NA	110402689	110447675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ENSMUST00000200466.5	chr13	+	3224	21	FSM	ENSMUSG00000021314.14	ENSMUST00000200466.5	3224	21	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_16	10.4957134107215	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTACATGGGTTCTTTT	NA	False	NA	10	True	AATAAA	-15	NA	19132520	19335082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19309195_19309319_19321705_19321913_19323341_19323603_19326134_19326237_19333905
ENSMUST00000200468.2	chr9	+	865	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200468.2	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	57.3431774494578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTTCAGCCCTTCCTC	NA	False	NA	NA	False	AGTAAA	-17	NA	109662109	109671729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUST00000200471.2	chrX	-	3124	2	FSM	ENSMUSG00000031229.17	ENSMUST00000200471.2	3124	2	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTGAAGCATTTAAT	NA	False	NA	-1	True	AATAAA	-16	NA	104918911	104909151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_104911530_104918165
ENSMUST00000200473.2	chr5	+	5292	1	FSM	ENSMUSG00000105263.2	ENSMUST00000200473.2	5292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGTCTCGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	44295321	44300613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_44295300_44300600
ENSMUST00000200475.2	chr5	-	1293	1	FSM	ENSMUSG00000035505.15	ENSMUST00000200475.2	1293	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAGGCTCTGGTGAGAT	2675	False	NA	-10	True	AATAAA	-10	NA	90363881	90362588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_90362600_90363900
ENSMUST00000200479.2	chr5	+	3099	1	FSM	ENSMUSG00000029591.15	ENSMUST00000200479.2	3099	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	114270140	114273239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_114270100_114273200
ENSMUST00000200486.5	chr3	+	1231	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_5	8.74070935336486	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATGTGTATGTATGT	NA	False	NA	NA	False	ATTAAA	-26	NA	94320623	94333695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ENSMUST00000200524.5	chr3	+	2552	20	FSM	ENSMUSG00000028034.16	ENSMUST00000200524.5	2552	20	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_19	393.500738277491	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCGGTAAGTTGGATAT	NA	False	NA	26	True	AATAAA	-16	NA	151916118	151938409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
ENSMUST00000200543.5	chr3	-	5509	20	FSM	ENSMUSG00000028184.13	ENSMUST00000200543.5	5509	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_19	7.16253719419116	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAATAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	148696191	148521728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148696075
ENSMUST00000200546.2	chr3	+	4712	7	FSM	ENSMUSG00000036863.13	ENSMUST00000200546.2	4712	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	22.9685775692696	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTATTGTAATTGATTT	NA	False	NA	5	True	ATTAAA	-16	NA	145694407	145727475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145694925_145704220_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ENSMUST00000200566.5	chr5	+	1422	8	FSM	ENSMUSG00000029089.9	ENSMUST00000200566.5	1422	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	26.2717354134182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAGTTCTACATATATG	NA	False	NA	14	True	ATTAAA	-22	NA	48529774	48546188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ENSMUST00000200570.5	chr3	+	2491	12	FSM	ENSMUSG00000039068.17	ENSMUST00000200570.5	2491	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	80.0980803723712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTCTGTTTTTCATCT	NA	False	NA	95	True	GATAAA	-17	NA	152101768	152165189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_152101776_152125651_152125778_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUST00000200587.5	chr5	+	1026	4	FSM	ENSMUSG00000029178.15	ENSMUST00000200587.5	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	49.9266128098699	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGCTGTGGATGGC	NA	False	NA	18	True	AATAAA	-18	NA	64960919	64980452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221
ENSMUST00000200607.5	chr5	-	3704	17	FSM	ENSMUSG00000045078.13	ENSMUST00000200607.5	3704	17	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_14	28.9242005075335	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGGCTTTTGTCCTCC	6144	False	NA	NA	False	NA	NA	NA	143098735	142977574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076685_143078749_143078881_143084133_143084261_143098653
ENSMUST00000200645.5	chr5	-	2404	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_8	345.39967790952	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959357	122925793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUST00000200653.2	chr5	-	1726	1	FSM	ENSMUSG00000038569.14	ENSMUST00000200653.2	1726	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGCCTCAAATCC	9989	False	NA	NA	False	NA	NA	NA	122492283	122490557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122490600_122492300
ENSMUST00000200657.5	chr5	-	1668	10	FSM	ENSMUSG00000035234.19	ENSMUST00000200657.5	1668	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	36.8299395118217	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAATATCTTATTTTT	NA	False	NA	-3	True	AATAAA	-19	NA	100968806	100953057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUST00000200686.4	chr5	+	937	3	FSM	ENSMUSG00000041147.11	ENSMUST00000200686.4	937	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	32.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAGAAAAAAAAAGC	370	False	NA	NA	False	NA	NA	NA	150446094	150453305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_150446556_150446639_150446745_150452934
ENSMUST00000200692.4	chr5	+	1816	7	FSM	ENSMUSG00000029166.15	ENSMUST00000200692.4	1816	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.56131072780134	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTCCTCAATTGA	2319	False	NA	13	True	AATAAA	-13	NA	30972097	31023403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020705_31021917_31022073_31022158_31022312_31022471
ENSMUST00000200730.4	chr5	+	2019	16	FSM	ENSMUSG00000029146.15	ENSMUST00000200730.4	2019	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	132.900564332888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTACCTTTGGTTCCCTC	NA	False	NA	15	True	ATTAAA	-15	NA	31350637	31356238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352549_31352624_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUST00000200744.4	chr5	-	1653	7	FSM	ENSMUSG00000107283.4	ENSMUST00000200744.4	1653	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	140.104722737434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTGTGTCTTTA	NA	False	NA	NA	False	TTTAAA	-4	NA	31311566	31298006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31299195_31302043_31302097_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUST00000200758.4	chr7	+	9856	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	NA	False	NA	9	True	NA	NA	NA	58878549	58961284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUST00000200758.4-0	chr7	+	3264	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	0	6592	0	0	multi-exon	FALSE	canonical	3	50	junction_1	78.4443805083151	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAGAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	58878549	58954692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUST00000200759.2	chr5	+	2752	1	FSM	ENSMUSG00000041264.17	ENSMUST00000200759.2	2752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACCAAAGATAGTACT	NA	False	NA	NA	False	TTTAAA	-23	NA	149123062	149125814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_149123100_149125800
ENSMUST00000200773.2	chr5	+	1119	1	FSM	ENSMUSG00000107018.2	ENSMUST00000200773.2	1119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAGATGGATATTTT	NA	False	NA	NA	False	NA	NA	NA	32787185	32788304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32787200_32788300
ENSMUST00000200830.4	chr5	-	2384	6	FSM	ENSMUSG00000029153.12	ENSMUST00000200830.4	2384	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	59.1066832092615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGCTGGCTTTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-35	NA	73496291	73479541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73495873
ENSMUST00000200840.2	chr5	-	1371	3	FSM	ENSMUSG00000041132.12	ENSMUST00000200840.2	1371	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATGTCTTGTCTTTCAA	4560	False	NA	NA	False	AATAAA	-17	NA	150517993	150515216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_150516025_150516604_150516903_150517728
ENSMUST00000200863.2	chr5	+	3288	13	FSM	ENSMUSG00000056602.14	ENSMUST00000200863.2	3288	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	6.41612551830672	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATTTTTATATGTG	NA	False	NA	9	True	ATTAAA	-15	NA	150374594	150421218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ENSMUST00000200874.2	chr5	-	896	4	FSM	ENSMUSG00000040731.14	ENSMUST00000200874.2	896	4	0	0	0	0	multi-exon	FALSE	canonical	3	2106	junction_3	61.0482504981829	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGTCCTAGATAGGGGT	2225	False	NA	NA	False	NA	NA	NA	134668156	134653735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUST00000200889.4	chr10	+	2384	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.5764535535124	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATACTGCCATCCATT	NA	False	NA	NA	False	AATAAA	-23	NA	81540658	81557810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
ENSMUST00000200905.2	chr5	-	1046	1	FSM	ENSMUSG00000029397.16	ENSMUST00000200905.2	1046	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAGAAAAAAAAAAAAA	1677	False	NA	NA	False	NA	NA	NA	92110585	92109539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92109500_92110600
ENSMUST00000200912.2	chr5	+	799	1	FSM	ENSMUSG00000106926.2	ENSMUST00000200912.2	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCACCCATTGTATTTTT	NA	False	NA	NA	False	GATAAA	-27	NA	82484697	82485496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_82484700_82485500
ENSMUST00000200914.5	chr17	-	2223	4	FSM	ENSMUSG00000055202.12	ENSMUST00000200914.5	3536	4	0	1313	0	417	multi-exon	FALSE	canonical	3	5	junction_3	3.09120616516523	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTAATTGATGAAGGAAGA	4484	False	NA	NA	False	NA	NA	NA	33028905	33015962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33017848_33019360_33019422_33019785_33019913_33028755
ENSMUST00000200999.2	chr5	+	1403	5	FSM	ENSMUSG00000014932.16	ENSMUST00000200999.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_1	28.4725745235657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGAGGTGAGGGGTGAC	NA	False	NA	NA	False	NA	NA	NA	32796874	32810527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500
ENSMUST00000201010.2	chr5	+	7781	31	FSM	ENSMUSG00000018076.13	ENSMUST00000201010.2	7781	31	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_24	21.7660285766605	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTTAAAGCATTCGCA	NA	False	NA	NA	False	TTTAAA	-14	NA	118698803	118901981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ENSMUST00000201033.2	chr6	+	672	3	FSM	ENSMUSG00000029916.12	ENSMUST00000201033.2	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGTATGAAAGTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	40306425	40325039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_40306534_40324345_40324386_40324515
ENSMUST00000201047.4	chr13	-	3279	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_3	2.05480466765633	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGACTGGTATCTATCCT	NA	False	NA	NA	False	NA	NA	NA	62933622	62920013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ENSMUST00000201047.4-0	chr13	-	2639	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	24	616	0	-616	multi-exon	FALSE	canonical	3	25	junction_3	2.05480466765633	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGGACCAGTTGT	NA	False	NA	3	True	NA	NA	NA	62933598	62920629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ENSMUST00000201102.2	chr6	-	1838	2	FSM	ENSMUSG00000030346.17	ENSMUST00000201102.2	1838	2	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	NA	False	NA	-5	True	AATAAA	-21	NA	126902792	126900377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_126901304_126901880
ENSMUST00000201117.4	chrX	+	552	6	FSM	ENSMUSG00000016308.13	ENSMUST00000201117.4	552	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	359.082497484909	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGAACAAAGCTGGCGCG	NA	False	NA	NA	False	NA	NA	NA	36138010	36146765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_36138183_36138370_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUST00000201125.4	chr5	+	1352	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	7.48331477354788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGAGGTTCCCTTTCC	NA	False	NA	19	True	ATTAAA	-21	NA	31107409	31112435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
ENSMUST00000201128.2	chr5	+	811	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	0	270	0	-270	multi-exon	FALSE	canonical	3	33	junction_2	30.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGATGATTTGAATATG	NA	False	NA	4	True	NA	NA	NA	147355410	147359584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_147355512_147357439_147357607_147359041
ENSMUST00000201143.2	chr5	-	2156	22	FSM	ENSMUSG00000029415.5	ENSMUST00000201143.2	2156	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	77.7590324025538	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCAAGGAACACTATAAT	NA	False	NA	-36	True	ATTAAA	-1	NA	92457753	92434599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446118_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ENSMUST00000201159.2	chr6	-	3798	1	FSM	ENSMUSG00000106990.2	ENSMUST00000201159.2	3798	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGTGATTGTAGTGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	28214804	28211006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_28211000_28214800
ENSMUST00000201177.2	chr5	-	1535	2	FSM	ENSMUSG00000107142.2	ENSMUST00000201177.2	1535	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGGTTATGTCTTT	NA	False	NA	-2	True	NA	NA	NA	31652523	31643976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31645206_31652217
ENSMUST00000201185.4	chr2	+	2607	18	FSM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	7.49855810822468	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCCCCAGGTGTCTCA	NA	False	NA	NA	False	AATAAA	-15	NA	35146391	35197902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_35146486_35156831_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ENSMUST00000201202.4	chr5	+	715	6	FSM	ENSMUSG00000052139.19	ENSMUST00000201202.4	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_3	63.9606128801155	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGATCGTTTAGCT	5882	False	NA	NA	False	AATAAA	-14	NA	31855357	31988560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428
ENSMUST00000201203.4	chr5	+	2775	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	1623	1712	0	0	multi-exon	FALSE	canonical	3	358	junction_2	22.5422346662881	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCTGTCTGAATCTT	NA	False	NA	19	True	AATAAA	-19	NA	31026978	31034812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUST00000201260.4	chr5	-	2139	15	FSM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	308.085372808862	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCATGTGGAGCGTAC	NA	False	NA	-7	True	AATAAA	-11	NA	38718978	38684929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718540_38718858
ENSMUST00000201260.4-0	chr5	-	3084	15	FSM	ENSMUSG00000005103.13	ENSMUST00000201260.4	2139	15	-171	-774	0	0	multi-exon	FALSE	canonical	0	0	junction_6	308.085372808862	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719149	38684155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718540_38718858
ENSMUST00000201264.2	chr5	-	1831	1	FSM	ENSMUSG00000029603.16	ENSMUST00000201264.2	1831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCAGTCCCACTGTGGG	NA	False	NA	-65	True	TTTAAA	-40	NA	120820144	120818313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_120818300_120820100
ENSMUST00000201292.4	chr5	+	1529	7	FSM	ENSMUSG00000029203.17	ENSMUST00000201292.4	1529	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	633.60961079271	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACATTAATTTTTAAAA	NA	False	NA	26	True	AATAAA	-27	NA	65694618	65753098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65694802_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUST00000201292.4-0	chr5	+	904	7	FSM	ENSMUSG00000029203.17	ENSMUST00000201292.4	1529	7	15	610	0	0	multi-exon	FALSE	canonical	0	0	junction_2	633.60961079271	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTTAATTTT	NA	False	NA	20	True	AATAAA	-31	NA	65694633	65752488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65694802_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUST00000201314.2	chr5	-	2240	2	FSM	ENSMUSG00000023452.20	ENSMUST00000201314.2	2240	2	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGGGGGGGGATGTTC	9925	False	NA	NA	False	TATAAA	-11	NA	32897728	32895241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_32895879_32896125
ENSMUST00000201333.4	chr5	+	1027	6	FSM	ENSMUSG00000029149.15	ENSMUST00000201333.4	1027	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	7.52063827078527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGCCTGATTACAGTT	NA	False	NA	4	True	AATAAA	-16	NA	31409034	31410541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410347_31410437
ENSMUST00000201352.4	chr5	+	1888	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_9	56.490326824983	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTCCTGAAGGCTTC	5552	False	NA	35	True	AATAAA	-31	NA	31855027	32242306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ENSMUST00000201355.4	chr6	-	2003	12	FSM	ENSMUSG00000029847.14	ENSMUST00000201355.4	2003	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	2.56808125305919	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATGAAGAGCATAATCAG	NA	False	NA	NA	False	NA	NA	NA	34965339	34922869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_34923272_34925142_34925239_34925332_34925442_34925739_34925905_34930699_34930954_34931904_34932062_34932804_34932926_34933811_34933994_34936389_34936550_34953960_34954119_34955843_34955991_34965287
ENSMUST00000201374.4	chr6	+	6411	43	FSM	ENSMUSG00000038759.16	ENSMUST00000201374.4	6411	43	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	77.9267236770451	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGTGTGGTCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	35154355	35224531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_35154585_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ENSMUST00000201377.2	chr5	+	640	1	FSM	ENSMUSG00000058013.12	ENSMUST00000201377.2	640	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGATTTCCGTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	93241296	93241936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_93241300_93241900
ENSMUST00000201380.2	chr5	+	3549	13	FSM	ENSMUSG00000029407.11	ENSMUST00000201380.2	3549	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	129.019674425604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACCAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	92285805	92331914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756
ENSMUST00000201393.2	chr5	+	1088	2	FSM	ENSMUSG00000029149.15	ENSMUST00000201393.2	1088	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTGCAGGAACTGACAGA	NA	False	NA	NA	False	NA	NA	NA	31409059	31410235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31409448_31409535
ENSMUST00000201414.5	chr5	+	2588	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	0	0	0	0	multi-exon	TRUE	canonical	3	3618	junction_3	465.957308149311	4130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	False	NA	38	True	AATAAA	-30	NA	129864061	129875212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUST00000201422.4	chr5	-	1697	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	195.851880725393	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	-4	True	AATAAA	-14	NA	41865464	41782318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUST00000201448.4	chr6	-	2669	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354606	39312918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ENSMUST00000201448.4-0	chr6	-	3884	14	FSM	ENSMUSG00000029924.13	ENSMUST00000201448.4	2669	14	-3	-1212	0	0	multi-exon	FALSE	canonical	3	31	junction_9	72.7375113825747	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354609	39311706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ENSMUST00000201464.2	chr5	+	831	4	FSM	ENSMUSG00000023104.10	ENSMUST00000201464.2	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1232	junction_2	60.6684981408529	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	8977	False	NA	19	True	GATAAA	-15	NA	134622972	134627182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_134623129_134624136_134624218_134625735_134625850_134626702
ENSMUST00000201488.2	chr7	-	1342	1	FSM	ENSMUSG00000107383.2	ENSMUST00000201488.2	1342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4979	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTCTTGCCAGTCGCCT	NA	False	NA	NA	False	NA	NA	NA	116425086	116423744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_116423700_116425100
ENSMUST00000201493.2	chr6	-	2583	1	FSM	ENSMUSG00000107215.2	ENSMUST00000201493.2	2583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATACAACTTGTCTTGT	6692	False	NA	NA	False	NA	NA	NA	3339354	3336771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_3336800_3339400
ENSMUST00000201497.2	chr16	+	735	3	FSM	ENSMUSG00000039456.11	ENSMUST00000201497.2	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCTTCAGTTGTCTCC	1088	False	NA	NA	False	AGTAAA	-22	NA	93629122	93641629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93629237_93638258_93638332_93641081
ENSMUST00000201509.2	chr3	+	4301	15	FSM	ENSMUSG00000027630.14	ENSMUST00000201509.2	4301	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	62.4955508620495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	22203105	22267239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263679_22263778_22264564
ENSMUST00000201511.2	chr5	-	4246	18	FSM	ENSMUSG00000036553.17	ENSMUST00000201511.2	4246	18	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_17	16.3400287573917	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGTATCTTCTAGGT	NA	False	NA	-8	True	AGTAAA	-12	NA	35897331	35854526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
ENSMUST00000201534.2	chr5	-	1287	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201534.2	1287	8	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_1	63.5022095067951	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTCATTAGTGTGACA	NA	False	NA	-3	True	ATTAAA	-24	NA	135378897	135366219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ENSMUST00000201545.2	chr5	-	1937	8	FSM	ENSMUSG00000032867.9	ENSMUST00000201545.2	1937	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	29.5476094547392	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTCCAGATTTTAGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	118293491	118215116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ENSMUST00000201557.2	chr7	-	2279	1	FSM	ENSMUSG00000039176.18	ENSMUST00000201557.2	2279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-40	NA	79115942	79113663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79113700_79115900
ENSMUST00000201570.2	chr6	+	2837	1	FSM	ENSMUSG00000029911.15	ENSMUST00000201570.2	2837	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAATGTATTATAG	NA	False	NA	NA	False	NA	NA	NA	40448386	40451223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_40448400_40451200
ENSMUST00000201575.4	chr5	-	2091	8	FSM	ENSMUSG00000037373.13	ENSMUST00000201575.4	2091	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	292.512270804882	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAAAAATCCCAGA	NA	False	NA	-45	True	NA	NA	NA	33432336	33405097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33432122
ENSMUST00000201581.2	chr5	-	1903	1	FSM	ENSMUSG00000106870.2	ENSMUST00000201581.2	1903	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCCCCATTATCCCTA	NA	False	NA	NA	False	AATAAA	-19	NA	93333617	93331714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_93331700_93333600
ENSMUST00000201595.4	chr5	-	2064	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	118.120954957196	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATATTTTTTTTTCACT	NA	False	NA	NA	False	AAAAAG	-2	NA	148489599	148441938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
ENSMUST00000201617.2	chr6	+	550	3	FSM	ENSMUSG00000030347.7	ENSMUST00000201617.2	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	62.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGGCCGTTAAATCCG	NA	False	NA	NA	False	NA	NA	NA	126916991	126921827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_126917274_126919274_126919470_126921754
ENSMUST00000201620.2	chr5	+	2741	2	FSM	ENSMUSG00000106918.4	ENSMUST00000201620.2	2741	2	0	0	0	0	multi-exon	FALSE	canonical	3	2333	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771356	31779986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31773832_31779720
ENSMUST00000201651.4	chr16	-	833	4	FSM	ENSMUSG00000022540.17	ENSMUST00000201651.4	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	22.7596133534821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTGGCTCACAGGATG	NA	False	NA	NA	False	NA	NA	NA	4831417	4829572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUST00000201659.2	chr5	+	1789	1	FSM	ENSMUSG00000029098.18	ENSMUST00000201659.2	1789	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCCTAAAAAGTGACAG	9484	False	NA	NA	False	AATAAA	-33	NA	35767442	35769231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_35767400_35769200
ENSMUST00000201674.2	chr5	+	967	6	FSM	ENSMUSG00000023104.10	ENSMUST00000201674.2	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_5	81.2147769805471	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGCGTGTGTAAAGGTCA	NA	False	NA	NA	False	NA	NA	NA	134611610	134620488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972
ENSMUST00000201695.2	chr5	+	1119	3	FSM	ENSMUSG00000058013.12	ENSMUST00000201695.2	1119	3	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_2	23.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATCATAGTACTTTGTT	NA	False	NA	NA	False	AATAAA	-15	NA	93296361	93305561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_93296442_93302728_93302916_93304709
ENSMUST00000201710.4	chr7	-	2565	10	FSM	ENSMUSG00000019082.19	ENSMUST00000201710.4	2565	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	40.6256623877623	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	462	False	NA	-19	True	AATAAA	-18	NA	141017550	141009661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017467
ENSMUST00000201715.2	chr5	-	3672	1	FSM	ENSMUSG00000107000.2	ENSMUST00000201715.2	3672	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTAACAGAAAAAAACTG	7019	False	NA	NA	False	AGTAAA	-21	NA	134299590	134295918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134295900_134299600
ENSMUST00000201721.2	chr5	+	1519	1	FSM	ENSMUSG00000039191.13	ENSMUST00000201721.2	1519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCGAGACAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	53713047	53714566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53713000_53714600
ENSMUST00000201784.4	chr5	-	1235	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201784.4	1235	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	331.894438590566	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTCATTAGTGTGACA	NA	False	NA	-3	True	ATTAAA	-24	NA	135378729	135366219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378672
ENSMUST00000201791.4	chr5	-	1297	8	FSM	ENSMUSG00000040013.12	ENSMUST00000201791.4	1297	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	339.384075967639	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378868	135320557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135374943_135375147_135376730_135376821_135378471_135378590_135378788
ENSMUST00000201801.4	chr5	-	2272	11	FSM	ENSMUSG00000025534.18	ENSMUST00000201801.4	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	32.1249124512426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAAAACTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	130031669	130017863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029597_130029784_130031447
ENSMUST00000201855.2	chr5	+	4809	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGCTGCCATCGTTCT	NA	False	NA	13	True	AATAAA	-20	NA	129970949	130015533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129971207_130010981
ENSMUST00000201855.2-0	chr5	+	2923	2	FSM	ENSMUSG00000066735.9	ENSMUST00000201855.2	4809	2	-60	1946	-60	0	multi-exon	FALSE	canonical	3	56	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970889	130013587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129971207_130010981
ENSMUST00000201858.4	chr5	+	2109	8	FSM	ENSMUSG00000029141.17	ENSMUST00000201858.4	2109	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	11.004637241469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTTGTTTTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	31684355	31694166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481
ENSMUST00000201888.2	chr5	-	408	2	FSM	ENSMUSG00000072692.8	ENSMUST00000201888.2	408	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTAATC	NA	False	NA	-15	True	AATAAA	-13	NA	115246021	115241249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115241588_115245951
ENSMUST00000201923.2	chr5	+	773	3	FSM	ENSMUSG00000106918.4	ENSMUST00000201923.2	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	1626	junction_1	353.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGAGACCACATATTTA	NA	False	NA	-53	True	NA	NA	NA	31771495	31779916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31771966_31773724_31773832_31779720
ENSMUST00000201958.4	chr5	+	2242	21	FSM	ENSMUSG00000039178.10	ENSMUST00000201958.4	2242	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	19.8148303045976	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAGATATCTCTAATAA	NA	False	NA	NA	False	ATTAAA	-20	NA	53966995	54061305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53967201_53986691_53986765_53987796_53987841_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUST00000201987.2	chr5	-	2443	4	FSM	ENSMUSG00000029202.13	ENSMUST00000201987.2	2443	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	284.578440660723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACGATGATCTAAATAA	NA	False	NA	NA	False	NA	NA	NA	65779891	65772758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65772948_65776286_65776396_65776962_65777109_65777892
ENSMUST00000202034.2	chr5	+	2995	1	FSM	ENSMUSG00000018604.19	ENSMUST00000202034.2	2995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGAAGAAGAAAAAAA	NA	False	NA	NA	False	AATACA	-7	NA	119808733	119811728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_119808700_119811700
ENSMUST00000202060.4	chr5	+	3121	12	FSM	ENSMUSG00000029165.18	ENSMUST00000202060.4	3121	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	7.05585742252082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGGATGACTACTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	31046317	31060831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396
ENSMUST00000202078.2	chr5	+	1990	4	FSM	ENSMUSG00000014956.16	ENSMUST00000202078.2	383	4	110	-1717	110	0	multi-exon	FALSE	canonical	0	0	junction_1	632.928291532479	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAGTGATTATTCTGT	3184	False	NA	23	True	AGTAAA	-20	NA	32616675	32650100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32616752_32640769_32640809_32642602_32642675_32648297
ENSMUST00000202116.4	chr18	+	2986	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCCCACACTGTGGAG	3190	False	NA	NA	False	NA	NA	NA	69478789	69816461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ENSMUST00000202116.4-0	chr18	+	3485	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	454	-953	0	0	multi-exon	FALSE	canonical	3	43	junction_17	23.6466368624176	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	3644	False	NA	NA	False	AATACA	-35	NA	69479243	69817414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ENSMUST00000202143.4	chr6	-	3202	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202143.4	3202	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	54.0722664588789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7745	False	NA	-2	True	AATAAA	-20	NA	35110560	34998999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUST00000202163.4	chr5	+	1376	5	FSM	ENSMUSG00000025532.14	ENSMUST00000202163.4	931	5	9	-454	0	0	multi-exon	FALSE	canonical	3	60	junction_3	138.212472302611	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCCACCATACCTGG	NA	False	NA	5	True	AAAACA	-1	NA	130058151	130089630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130077766_130077825_130088545
ENSMUST00000202167.2	chr5	+	3175	5	FSM	ENSMUSG00000005672.13	ENSMUST00000202167.2	3175	5	0	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_4	88.7422531830244	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAAATGTAAATATAT	NA	False	NA	-14	True	NA	NA	NA	75809753	75817354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
ENSMUST00000202170.4	chr5	+	6598	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	0	0	0	0	multi-exon	FALSE	canonical	2	95	junction_31	24.4340259944524	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAACAAAAAAAATATTA	NA	False	NA	NA	False	AATATA	-17	NA	150597203	150733330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ENSMUST00000202179.2	chr11	+	3665	13	FSM	ENSMUSG00000042331.14	ENSMUST00000202179.2	6676	13	-38	3049	0	0	multi-exon	FALSE	canonical	0	0	junction_10	9.09326673973661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCACACTGACTAGGGAAA	NA	False	NA	NA	False	AAAACA	-30	NA	61967884	62110790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62110110
ENSMUST00000202194.2	chr13	-	2223	3	FSM	ENSMUSG00000094942.8	ENSMUST00000202194.2	736	3	0	-1487	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGATCAGTCG	NA	False	NA	-12	True	NA	NA	NA	62530965	62516141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62518166_62519623_62519751_62530893
ENSMUST00000202199.2	chr5	-	3909	1	FSM	ENSMUSG00000005103.13	ENSMUST00000202199.2	3909	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	38718886	38714977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_38715000_38718900
ENSMUST00000202204.4	chr6	-	638	7	FSM	ENSMUSG00000029924.13	ENSMUST00000202204.4	638	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	129.685517053113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTATGCTGTGGTAAGT	NA	False	NA	NA	False	NA	NA	NA	39354581	39336897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39349012_39349072_39349780_39349862_39354552
ENSMUST00000202254.4	chr5	-	4718	18	FSM	ENSMUSG00000106864.4	ENSMUST00000202254.4	4718	18	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_17	85.762849975885	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGAGCTTGGCTTGTCCTG	NA	False	NA	-26	True	AATAAA	-19	NA	31337476	31313348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUST00000202258.4	chr5	-	1884	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGCCCACTGAGTTCA	NA	False	NA	NA	False	AATGAA	-19	NA	92231517	92202358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUST00000202258.4-0	chr5	-	4281	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	-61	-2336	0	0	multi-exon	FALSE	canonical	3	524	junction_5	444.293682188997	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231578	92200022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUST00000202261.5	chr16	+	4179	17	FSM	ENSMUSG00000039456.11	ENSMUST00000202261.5	4179	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	152.272050435233	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAACTGAAAGTTAT	974	False	NA	16	True	AATAAA	-27	NA	93629008	93672961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642243_93644170_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ENSMUST00000202281.4	chr16	-	1355	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_7	47.5572286829247	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831381	4826593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUST00000202289.4	chr5	-	1057	5	FSM	ENSMUSG00000040731.14	ENSMUST00000202289.4	1057	5	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_1	622.036373534539	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGCCCAGGCAAGGAA	2202	False	NA	NA	False	NA	NA	NA	134668179	134652732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUST00000202298.4	chr5	+	3237	4	FSM	ENSMUSG00000066735.9	ENSMUST00000202298.4	607	4	-125	-2505	-60	0	multi-exon	FALSE	canonical	3	11	junction_1	413.244345259423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGTGTTTTATTTGG	NA	False	NA	44	True	AATATA	-17	NA	129970889	130013587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_129971207_130005829_130006034_130007359_130007470_130010981
ENSMUST00000202306.2	chr18	+	398	2	FSM	ENSMUSG00000024472.10	ENSMUST00000202306.2	398	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCCCTTTTTGTTTTTC	NA	False	NA	13	True	AATAAA	-14	NA	44513568	44529152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_44513754_44528939
ENSMUST00000202308.4	chr5	+	1792	10	FSM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	237.094813560491	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCCATCCCTGCCT	NA	False	NA	4	True	TTTAAA	-16	NA	93241309	93324296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
ENSMUST00000202313.2	chr5	+	10517	27	FSM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	34.4104188157733	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	384	False	NA	13	True	AATAAA	-22	NA	150446108	150493212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUST00000202358.2	chr1	+	687	2	FSM	ENSMUSG00000060679.15	ENSMUST00000202358.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCCTTTTTTTTTAAAC	NA	False	NA	15	True	AATAAA	-17	NA	42942216	42944843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_42942625_42944564
ENSMUST00000202361.4	chr5	-	3802	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	0	0	0	0	multi-exon	FALSE	canonical	3	1194	junction_12	107.653101726883	2793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGAGTTCTTTTGTTGTC	NA	False	NA	11	True	TTTAAA	-13	NA	149559803	149540008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUST00000202370.2	chr6	-	423	1	FSM	ENSMUSG00000107176.2	ENSMUST00000202370.2	423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCCAGTGTATTTGTAAA	NA	False	NA	-60	True	NA	NA	NA	66852727	66852304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_66852300_66852700
ENSMUST00000202393.2	chr6	-	831	1	FSM	ENSMUSG00000039130.19	ENSMUST00000202393.2	831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCCTGCTGCTAGAGA	NA	False	NA	-15	True	AATAAA	-10	NA	30367217	30366386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_30366400_30367200
ENSMUST00000202417.2	chr6	-	3296	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	41.7378724901018	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAATCTTAACAATA	7646	False	NA	NA	False	AAAAAG	-28	NA	35110659	35021930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUST00000202447.4	chr5	+	3959	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTGACCTGCCCGCTT	NA	False	NA	11	True	AATAAA	-22	NA	118114794	118148266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
ENSMUST00000202447.4-0	chr5	+	2405	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	44	1510	0	129	multi-exon	FALSE	canonical	3	123	junction_9	98.2366008780135	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTTTTTTTGTTGTTGT	NA	False	NA	28	True	AATACA	-20	NA	118114838	118146756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
ENSMUST00000202535.4	chr7	+	3112	4	FSM	ENSMUSG00000064194.11	ENSMUST00000202535.4	3112	4	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	65.2226954364813	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTTAATTATG	NA	False	NA	NA	False	AATGAA	-10	NA	42827011	42841533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_42827128_42836593_42836721_42836916_42836978_42838725
ENSMUST00000202543.4	chr5	+	2657	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAAATAAAAAACAAACC	NA	False	NA	NA	False	NA	NA	NA	32768514	32842921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ENSMUST00000202543.4-0	chr5	+	4137	12	FSM	ENSMUSG00000014932.16	ENSMUST00000202543.4	2657	12	0	-1480	0	0	multi-exon	FALSE	canonical	3	599	junction_1	80.0238600782178	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768514	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ENSMUST00000202556.4	chr5	-	3078	18	FSM	ENSMUSG00000006641.13	ENSMUST00000202556.4	3078	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	33.6216481587904	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGGCCTCTGTGTTCC	803	False	NA	-2	True	AATAAA	-18	NA	31205353	31193380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201926_31204973_31205144_31205309
ENSMUST00000202567.2	chr5	-	1869	8	FSM	ENSMUSG00000045302.14	ENSMUST00000202567.2	1869	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	89.9026684582742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117624	31112386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31113082_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUST00000202577.2	chr6	+	5628	1	FSM	ENSMUSG00000025609.16	ENSMUST00000202577.2	5628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTCAGCTACTGCTCC	NA	False	NA	NA	False	NA	NA	NA	31375779	31381407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_31375800_31381400
ENSMUST00000202600.4	chr5	+	592	4	FSM	ENSMUSG00000056602.14	ENSMUST00000202600.4	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACAAAAGGCAAAACGGCA	1275	False	NA	NA	False	NA	NA	NA	150119930	150263885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817
ENSMUST00000202604.2	chr5	-	996	8	FSM	ENSMUSG00000029415.5	ENSMUST00000202604.2	996	8	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	27.4456791885799	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAATAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	92457848	92449493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ENSMUST00000202622.4	chr5	-	2726	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_3	647.667803224256	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACCTCTAAAGAAGAAAC	9878	False	NA	NA	False	NA	NA	NA	134668344	134648574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUST00000202639.4	chr5	-	4200	21	FSM	ENSMUSG00000106864.4	ENSMUST00000202639.4	4200	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	217.628261032431	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTAGAACCCAATAATG	NA	False	NA	66	True	ATTAAA	-24	NA	31337461	31313864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31333838_31333901_31337227
ENSMUST00000202643.2	chr5	-	6224	19	FSM	ENSMUSG00000039959.14	ENSMUST00000202643.2	6224	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_16	51.3018181277221	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCTGGTGATAAAGGG	1925	False	NA	-2	True	AATAAA	-20	NA	135464002	135435388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860
ENSMUST00000202645.4	chr13	-	1406	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	20.237478982214	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGTCATGATGTCTAT	NA	False	NA	NA	False	NA	NA	NA	74642089	74628172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
ENSMUST00000202648.4	chr5	-	2725	4	FSM	ENSMUSG00000029202.13	ENSMUST00000202648.4	2725	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	296.042039056768	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGAAACGTGAATATTC	NA	False	NA	NA	False	AATAAA	-27	NA	65777943	65765112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65767532_65776286_65776396_65776962_65777109_65777892
ENSMUST00000202651.4	chr5	-	9744	23	FSM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_22	10.4912399506674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACATTTTCCTTTCTTTA	NA	False	NA	-5	True	ATTAAA	-18	NA	76452639	76357714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ENSMUST00000202670.2	chrX	+	2774	2	FSM	ENSMUSG00000060681.16	ENSMUST00000202670.2	2774	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATTCACTGTTAT	NA	False	NA	13	True	ATTAAA	-17	NA	55703604	55709189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_55703725_55706535
ENSMUST00000202692.5	chr8	+	2364	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	17.1075032271418	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAATATATAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	4663166	4680231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ENSMUST00000202695.2	chr5	+	795	3	FSM	ENSMUSG00000039178.10	ENSMUST00000202695.2	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGGTTTATTAAATACC	NA	False	NA	NA	False	AATATA	-17	NA	53966990	53988308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_53967201_53986691_53986765_53987796
ENSMUST00000202711.2	chr5	+	848	2	FSM	ENSMUSG00000106968.2	ENSMUST00000202711.2	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGAGTCCCCC	NA	False	NA	NA	False	AATAAA	-4	NA	74103723	74105719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_74103968_74105115
ENSMUST00000202722.2	chr16	-	1445	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTTCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	31767312	31765867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31765900_31767300
ENSMUST00000202747.4	chr3	+	4209	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	26.4420540469575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAATAATAAAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22130890	22266915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ENSMUST00000202747.4-0	chr3	+	6826	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	-75	-2542	0	0	multi-exon	TRUE	canonical	3	160	junction_1	26.4420540469575	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130815	22269457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ENSMUST00000202758.4	chr5	-	1767	13	FSM	ENSMUSG00000029145.13	ENSMUST00000202758.4	1767	13	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_12	179.460688979199	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGACTCTGCTGCCT	NA	False	NA	-9	True	AATAAA	-15	NA	31350352	31344910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350163
ENSMUST00000202759.2	chr17	-	4251	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202759.2	374	4	0	-3877	0	-1746	multi-exon	FALSE	canonical	2	8	junction_2	14.4452991200136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATACATATACATACAT	NA	False	NA	NA	False	AATAAA	-20	NA	33049220	33036174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33040074_33040751_33040813_33041041_33041175_33049062
ENSMUST00000202798.2	chr7	-	1412	3	FSM	ENSMUSG00000107068.2	ENSMUST00000202798.2	1412	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	10	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCACGCCTTTAATCCCAGC	9430	False	NA	-20	True	AATAAA	-28	NA	126616524	126614222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126614642_126615371_126615455_126615614
ENSMUST00000202803.4	chr6	+	716	5	FSM	ENSMUSG00000054226.14	ENSMUST00000202803.4	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	23.847169643377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGGACTCATTACATTT	3409	False	NA	NA	False	TATAAA	-35	NA	85892719	85905077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789
ENSMUST00000202806.4	chr5	-	2707	8	FSM	ENSMUSG00000070733.14	ENSMUST00000202806.4	2707	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.5281063796649	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGTGTCCTTTAAATT	NA	False	NA	-4	True	GATAAA	-27	NA	73192385	73177668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_73179641_73179844_73180036_73181230_73181342_73182113_73182132_73184658_73184728_73190100_73190200_73190938_73191089_73192288
ENSMUST00000202822.2	chr5	+	371	3	FSM	ENSMUSG00000029522.13	ENSMUST00000202822.2	371	3	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	888.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTACCTGCTGTCAG	NA	False	NA	4	True	NA	NA	NA	115604324	115612755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_115604380_115610051_115610180_115612567
ENSMUST00000202826.2	chr15	-	4725	1	FSM	ENSMUSG00000106847.2	ENSMUST00000202826.2	4725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGGGAAAGTTCTTTG	NA	False	NA	2	True	AATAAA	-27	NA	72682173	72677448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_72677400_72682200
ENSMUST00000202857.4	chr5	-	2473	18	FSM	ENSMUSG00000029238.12	ENSMUST00000202857.4	2473	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	13.9447749140975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	76452601	76382963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402289_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ENSMUST00000202868.4	chr5	-	2436	10	FSM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	199.225041809384	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAAAAATCCCAGA	NA	False	NA	-45	True	NA	NA	NA	33432336	33405097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ENSMUST00000202891.2	chr6	+	3039	1	FSM	ENSMUSG00000107310.2	ENSMUST00000202891.2	3039	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCTCTAATGTCTAGGA	NA	False	NA	NA	False	NA	NA	NA	36933784	36936823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_36933800_36936800
ENSMUST00000202897.2	chr6	-	512	5	FSM	ENSMUSG00000030346.17	ENSMUST00000202897.2	512	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	98.8774494007607	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTATTTTTCTCACTTA	5277	False	NA	NA	False	NA	NA	NA	126916538	126905069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916456
ENSMUST00000202898.2	chr6	+	2409	15	FSM	ENSMUSG00000038759.16	ENSMUST00000202898.2	2409	15	0	0	0	0	multi-exon	FALSE	canonical	2	193	junction_5	41.0390555645796	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTATTCCTTCTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	35154550	35182588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259
ENSMUST00000202908.2	chr5	-	10399	26	FSM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_22	25.3587381389532	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGTGACAAGAATTTTT	NA	False	NA	0	True	TATAAA	-22	NA	42001658	41944880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ENSMUST00000202913.2	chr5	-	863	7	FSM	ENSMUSG00000029128.13	ENSMUST00000202913.2	863	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	193.008419505471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTTTGGGATTTTCAT	NA	False	NA	-5	True	AATAAA	-13	NA	41865500	41782319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_41782432_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUST00000202950.4	chr5	+	2499	14	FSM	ENSMUSG00000029141.17	ENSMUST00000202950.4	2499	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	21.8978262140197	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	False	NA	11	True	AGTAAA	-21	NA	31684355	31711386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705954_31706026_31708056_31708127_31711082
ENSMUST00000202962.4	chr5	-	3595	7	FSM	ENSMUSG00000037373.13	ENSMUST00000202962.4	3595	7	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_5	78.2235045665091	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTTATTTTTAGAATA	NA	False	NA	NA	False	NA	NA	NA	33432325	33405368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ENSMUST00000202980.2	chr5	-	2242	1	FSM	ENSMUSG00000009013.6	ENSMUST00000202980.2	2242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438722	115436480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115436500_115438700
ENSMUST00000202988.4	chr17	-	4120	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	15	1877	0	-1871	multi-exon	FALSE	canonical	3	24	junction_2	7.93025150224688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTATCTTTGATTT	NA	False	NA	-17	True	NA	NA	NA	33049220	33036299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
ENSMUST00000203077.3	chr6	+	1617	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	0	0	0	0	multi-exon	FALSE	canonical	3	3189	junction_3	1320.70455841276	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5872	False	NA	37	True	AATATA	-25	NA	67243994	67261295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000203079.2	chr6	+	1549	1	FSM	ENSMUSG00000108235.2	ENSMUST00000203079.2	1549	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGGCTGCCTCTCAGCC	NA	False	NA	NA	False	NA	NA	NA	129825655	129827204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_129825700_129827200
ENSMUST00000203137.3	chr6	-	1774	12	FSM	ENSMUSG00000030083.12	ENSMUST00000203137.3	1774	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	157.288543608278	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGGGGACCTGAGCCTG	6970	False	NA	-14	True	AATAAA	-11	NA	88818876	88812905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88813435_88813506_88813708_88815099_88815248_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854_88817883_88818750
ENSMUST00000203154.3	chr7	-	1947	5	FSM	ENSMUSG00000030654.10	ENSMUST00000203154.3	542	5	4	-1409	0	0	multi-exon	FALSE	canonical	3	10	junction_4	977.48375945588	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGTTAACTCTGA	NA	False	NA	-11	True	ATTAAA	-25	NA	117728795	117718113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117728691
ENSMUST00000203157.2	chr6	-	1035	3	FSM	ENSMUSG00000030189.16	ENSMUST00000203157.2	1035	3	0	0	0	0	multi-exon	FALSE	canonical	3	3049	junction_2	113	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATACCACATGGGGAT	7602	False	NA	-84	True	ATTAAA	-9	NA	131345981	131342062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_131342369_131344727_131344827_131345351
ENSMUST00000203164.3	chr6	-	2442	5	FSM	ENSMUSG00000039985.15	ENSMUST00000203164.3	2442	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	951.515238974132	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148834647	148822554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148824529_148827510_148827604_148830006_148830134_148832048_148832149_148834499
ENSMUST00000203187.3	chr6	-	3494	26	FSM	ENSMUSG00000030279.16	ENSMUST00000203187.3	3494	26	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	32.7664218369965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAAAGCTTATCAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	143045797	142957458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ENSMUST00000203187.3-0	chr6	-	4335	26	FSM	ENSMUSG00000030279.16	ENSMUST00000203187.3	3494	26	-36	-805	0	0	multi-exon	FALSE	canonical	3	13	junction_3	32.7664218369965	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	143045833	142956653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
ENSMUST00000203206.2	chr6	+	935	1	FSM	ENSMUSG00000071337.12	ENSMUST00000203206.2	935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCGACTAGTGGTTGAC	9697	False	NA	NA	False	ATTAAA	-15	NA	86381216	86382151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86381200_86382200
ENSMUST00000203209.3	chr6	-	1587	10	FSM	ENSMUSG00000030051.11	ENSMUST00000203209.3	1587	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	20.7632153365299	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATCTTCTGCCCTGA	NA	False	NA	-7	True	AATAAA	-20	NA	87649046	87606725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640698_87645397_87645470_87648971
ENSMUST00000203215.2	chr6	-	1293	2	FSM	ENSMUSG00000030061.17	ENSMUST00000203215.2	1293	2	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTGGGATCC	NA	False	NA	NA	False	TTTAAA	-3	NA	97182529	97181051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97182309_97182493
ENSMUST00000203220.3	chr6	-	1638	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	0	0	0	0	multi-exon	FALSE	canonical	3	5712	junction_10	720.046137410652	4549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446752	51439739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000203235.2	chr6	-	941	1	FSM	ENSMUSG00000030201.16	ENSMUST00000203235.2	941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTAAATAGTTTTGTTT	NA	False	NA	NA	False	AATAAA	-27	NA	134518677	134517736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134517700_134518700
ENSMUST00000203324.3	chr6	+	3822	25	FSM	ENSMUSG00000030016.15	ENSMUST00000203324.3	3822	25	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_21	84.8382345506239	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGGAAAGGAGAAAAGAA	NA	False	NA	NA	False	AAGAAA	-44	NA	83905836	83963605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ENSMUST00000203374.3	chr6	-	2223	11	FSM	ENSMUSG00000001518.13	ENSMUST00000203374.3	1394	11	-61	-768	0	0	multi-exon	FALSE	canonical	1	5	junction_10	80.3029264722027	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401893	128386406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128401680
ENSMUST00000203422.2	chr6	-	585	2	FSM	ENSMUSG00000030122.13	ENSMUST00000203422.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAACCCGTCTCCTGCT	NA	False	NA	-13	True	AATAAA	-19	NA	124891637	124890650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124891196_124891597
ENSMUST00000203436.3	chr6	+	1667	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	0	0	0	0	multi-exon	FALSE	canonical	3	2187	junction_4	1760.87005396161	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAAAGCTTTCACTTCA	5844	False	NA	32	True	AATATA	-20	NA	67243966	67261290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000203437.2	chr6	-	2799	1	FSM	ENSMUSG00000108053.2	ENSMUST00000203437.2	2799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAGAAAATACCTACTA	NA	False	NA	NA	False	NA	NA	NA	83293925	83291126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83291100_83293900
ENSMUST00000203467.3	chr8	-	2729	7	FSM	ENSMUSG00000038506.14	ENSMUST00000203467.3	2729	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	15.2397506541282	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	False	NA	-3	True	AATAAA	-14	NA	13337830	13305963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330916_13331126_13337803
ENSMUST00000203471.3	chr5	-	3952	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	103.759328563213	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCACCTGGAGCCGAGT	-14	True	NA	NA	False	AATAAA	-16	NA	65492961	65419944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUST00000203482.2	chr6	+	3202	13	FSM	ENSMUSG00000030134.12	ENSMUST00000203482.2	2227	13	0	-975	0	0	multi-exon	FALSE	canonical	3	24	junction_10	5.92780641459291	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043379	118068507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066395_118066469_118066776
ENSMUST00000203483.2	chr6	+	1845	10	FSM	ENSMUSG00000030231.12	ENSMUST00000203483.2	1845	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	13.1946491212195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	6610	False	NA	17	True	AATAAA	-17	NA	140523048	140542836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
ENSMUST00000203546.2	chr6	+	2654	1	FSM	ENSMUSG00000071337.12	ENSMUST00000203546.2	2654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAGGAAAAAA	NA	False	NA	NA	False	AGTAAA	-14	NA	86398962	86401616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86399000_86401600
ENSMUST00000203577.2	chr6	+	4468	13	FSM	ENSMUSG00000001632.17	ENSMUST00000203577.2	4468	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	43.4117079701881	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAGAATGGAGCTT	524	False	NA	NA	False	NA	NA	NA	113284389	113301685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
ENSMUST00000203581.3	chr5	-	4689	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	149.579410347815	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGAGTCTTGCCCCTCT	3	True	NA	-2	True	AATAAA	-21	NA	65492907	65419192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459396_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUST00000203607.2	chr6	+	2240	2	FSM	ENSMUSG00000030087.12	ENSMUST00000203607.2	2240	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACCATTTTTTGGCCCT	NA	False	NA	25	True	AATAAA	-21	NA	90443381	90452217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_90444506_90451101
ENSMUST00000203609.3	chr6	-	3648	7	FSM	ENSMUSG00000057691.9	ENSMUST00000203609.3	3648	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.5714673238882	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1050	False	NA	2	True	AATAAA	-17	NA	48063527	48039328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ENSMUST00000203627.2	chr6	+	2888	3	FSM	ENSMUSG00000073096.12	ENSMUST00000203627.2	666	3	-30	-2192	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTCTTGGTCATGGTA	8282	False	NA	13	True	NA	NA	NA	48531732	48547655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48531896_48533888_48534029_48545070
ENSMUST00000203649.3	chr6	-	2600	7	FSM	ENSMUSG00000029735.18	ENSMUST00000203649.3	2600	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.5929114949354	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCATTGTTTCTGTTCA	NA	False	NA	-78	True	NA	NA	NA	43602900	43322006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43602626
ENSMUST00000203652.3	chr6	+	2605	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	4.64545443563708	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACAGTCCCCTTCACTT	NA	False	NA	NA	False	ATTAAA	-17	NA	42326761	42335496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUST00000203653.3	chr5	+	6279	36	FSM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_26	8.32581429491851	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTAACATTTTCCTGG	8550	False	NA	NA	False	AATAAA	-14	NA	65357038	65417749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446
ENSMUST00000203680.2	chr6	-	711	4	FSM	ENSMUSG00000029814.11	ENSMUST00000203680.2	711	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	219.654273803175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTCCT	NA	False	NA	-3	True	ATTAAA	-22	NA	49191638	49144846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_49145040_49145403_49145453_49190200_49190262_49191230
ENSMUST00000203776.2	chr6	-	3588	6	FSM	ENSMUSG00000030051.11	ENSMUST00000203776.2	3588	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	26.5028300375639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTCTCTTATTT	NA	False	NA	NA	False	CATAAA	-17	NA	87649111	87628072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87630875_87635414_87635538_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ENSMUST00000203816.2	chr6	-	906	3	FSM	ENSMUSG00000057841.6	ENSMUST00000203816.2	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	17944	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785309	115782472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115782650_115783946_115784129_115784762
ENSMUST00000203820.3	chr6	-	2090	9	FSM	ENSMUSG00000029817.12	ENSMUST00000203820.3	2090	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	190.764866720788	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTTG	4612	False	NA	-4	True	AATAAA	-15	NA	49240945	49220857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49229736_49230043_49240771
ENSMUST00000203837.2	chr6	-	574	2	FSM	ENSMUSG00000038058.15	ENSMUST00000203837.2	574	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCAGAGATTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	54941673	54926460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_54926739_54941377
ENSMUST00000203854.3	chr7	+	3845	5	FSM	ENSMUSG00000057101.9	ENSMUST00000203854.3	3845	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	37.0202647208255	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGCAAAAAAAGAAACAG	NA	False	NA	NA	False	AATAAA	-9	NA	23781378	23807117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800877_23800994_23803829
ENSMUST00000203884.3	chr6	+	4869	10	FSM	ENSMUSG00000035158.16	ENSMUST00000203884.3	2113	10	0	-2756	0	0	multi-exon	FALSE	canonical	3	14	junction_1	21.9516865686871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTTGACCAGTTGTG	NA	False	NA	5	True	ATTAAA	-16	NA	97784012	97998310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_97784249_97918013_97918264_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ENSMUST00000203891.3	chr6	+	3968	24	FSM	ENSMUSG00000030016.15	ENSMUST00000203891.3	3968	24	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_21	84.1844450831081	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83905836	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
ENSMUST00000203895.3	chr3	+	3320	16	FSM	ENSMUSG00000025758.11	ENSMUST00000203895.3	3320	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	89.82788480694	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGTAAATAATGTATT	7808	False	NA	NA	False	AAAACA	-16	NA	40754476	40771186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759446_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUST00000203915.3	chr6	+	1491	12	FSM	ENSMUSG00000068328.11	ENSMUST00000203915.4	1491	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	313.3608012109	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGGTCTCTGTTGCCTCT	5423	False	NA	5	True	ATTAAA	-15	NA	83031711	83034659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
ENSMUST00000203929.3	chr7	+	795	1	FSM	ENSMUSG00000107470.3	ENSMUST00000203929.3	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	955	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAAGGTGGATGCGGTTGT	NA	False	NA	NA	False	NA	NA	NA	3230841	3231636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3230800_3231600
ENSMUST00000203954.3	chr6	-	1703	13	FSM	ENSMUSG00000004980.17	ENSMUST00000203954.3	1703	13	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	3043.32879243911	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446827	51438100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUST00000203956.2	chr6	+	593	1	FSM	ENSMUSG00000107761.2	ENSMUST00000203956.2	593	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATGGAAATACAGAAGC	NA	False	NA	NA	False	NA	NA	NA	125060399	125060992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_125060400_125061000
ENSMUST00000203964.2	chr2	-	1628	1	FSM	ENSMUSG00000107535.2	ENSMUST00000203964.2	1628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	38456366	38454738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_38454700_38456400
ENSMUST00000204056.2	chr6	-	2561	18	FSM	ENSMUSG00000030061.17	ENSMUST00000204056.2	2561	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_16	168.014169776465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCAAGTCTC	NA	False	NA	-18	True	AGTAAA	-17	NA	97182520	97160778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182063_97182309_97182493
ENSMUST00000204084.3	chr6	-	409	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204084.3	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	4235.12888430407	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCACTATTTAATGC	59	False	NA	-11	True	AATAAA	-15	NA	11907392	11900370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_11900591_11905200_11905262_11906018_11906077_11907322
ENSMUST00000204087.2	chr6	-	6119	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	21.2188595357997	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTGTGTGTTTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	85351616	85311948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
ENSMUST00000204090.2	chr6	-	766	2	FSM	ENSMUSG00000004980.17	ENSMUST00000204090.2	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	7812	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTACATTTATGATTTAA	NA	False	NA	-54	True	TTTAAA	-33	NA	51441140	51439779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51440474_51441068
ENSMUST00000204095.3	chr6	+	2462	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	0	1681	0	-1681	multi-exon	FALSE	canonical	3	52	junction_2	4.5	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTGTCACTGTTCTT	NA	False	NA	6	True	AATGAA	-14	NA	48578996	48598480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48579055_48590111_48590194_48596158
ENSMUST00000204097.3	chr5	+	3149	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	19.4393929946385	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTCTGGTTAATATAT	NA	False	NA	NA	False	TATAAA	-36	NA	65264881	65325449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
ENSMUST00000204134.3	chr6	-	3424	4	FSM	ENSMUSG00000045009.10	ENSMUST00000204134.3	3424	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.62466929133727	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTCGCTCTGGTCAA	4285	False	NA	1	True	AATAAA	-18	NA	113478892	113470885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113473027_113473892_113474049_113474232_113475278_113478810
ENSMUST00000204158.3	chr6	-	1542	11	FSM	ENSMUSG00000004980.17	ENSMUST00000204158.3	1542	11	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	2968.11001312283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACTTGGTGTAATGCT	NA	False	NA	-24	True	AATAAA	-14	NA	51446825	51438103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000204188.3	chr6	-	1518	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_3	2022.94680547408	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446752	51439739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUST00000204189.3	chr6	-	1777	8	FSM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	153.460491492044	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTTG	4613	False	NA	-4	True	AATAAA	-15	NA	49240944	49220857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ENSMUST00000204224.3	chr6	-	3367	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCAGTAGTGTGGGGTG	NA	False	NA	-7	True	ATTAAA	-17	NA	95695781	95449989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUST00000204224.3-0	chr6	-	2234	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	0	1133	0	0	multi-exon	FALSE	canonical	3	467	junction_5	91.8564096838103	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCACAGTTCTTGTTTCT	NA	False	NA	-7	True	AATAAA	-22	NA	95695781	95451122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUST00000204242.2	chr6	+	789	1	FSM	ENSMUSG00000063171.5	ENSMUST00000204242.2	789	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	858	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGACTCTGAGGGACATT	NA	False	NA	-25	True	NA	NA	NA	148256207	148256996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_148256200_148257000
ENSMUST00000204247.2	chr6	+	1770	1	FSM	ENSMUSG00000107743.2	ENSMUST00000204247.2	1770	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATCCATTCATTTTAAC	NA	False	NA	NA	False	ATTAAA	-14	NA	146277914	146279684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_146277900_146279700
ENSMUST00000204254.2	chr6	+	1147	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAAGACTGTCCTGTG	NA	False	NA	13	True	AATAAA	-17	NA	113419570	113425170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113419766_113424218
ENSMUST00000204269.2	chr6	-	1525	1	FSM	ENSMUSG00000108122.2	ENSMUST00000204269.2	1525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-38	NA	100639424	100637899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_100637900_100639400
ENSMUST00000204283.3	chr6	+	3728	27	FSM	ENSMUSG00000024104.12	ENSMUST00000204283.3	3728	27	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_25	48.2146488825119	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGTGGAGGGAGCAGGCG	NA	False	NA	NA	False	NA	NA	NA	116185476	116235943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602
ENSMUST00000204293.3	chr6	+	1336	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_3	1435.93298973887	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5871	False	NA	19	True	NA	NA	NA	67243993	67261031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000204385.2	chr6	+	1627	1	FSM	ENSMUSG00000068328.11	ENSMUST00000204385.2	1627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGTAGGTGGCTTC	5421	False	NA	NA	False	NA	NA	NA	83031709	83033336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83031700_83033300
ENSMUST00000204391.2	chr6	-	614	2	FSM	ENSMUSG00000030061.17	ENSMUST00000204391.2	614	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATATTTGATTAGATAG	NA	False	NA	NA	False	AATAGA	-35	NA	97182526	97179974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_97180556_97182493
ENSMUST00000204421.3	chr6	-	916	6	FSM	ENSMUSG00000030056.9	ENSMUST00000204421.3	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_5	17.469974241538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGATGTTGGGGATTG	NA	False	NA	NA	False	NA	NA	NA	87815695	87804016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ENSMUST00000204435.3	chr6	-	2785	7	FSM	ENSMUSG00000039985.15	ENSMUST00000204435.3	2785	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1029.14441271486	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCATGACTTTGTTT	NA	False	NA	NA	False	AATAAA	-25	NA	148845033	148822554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148839237_148839318_148844827
ENSMUST00000204459.3	chr6	-	821	5	FSM	ENSMUSG00000033216.10	ENSMUST00000204459.3	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	175.170452702503	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGCTCTTTGTGGGGCT	NA	False	NA	NA	False	AAAAAG	-10	NA	88423484	88258633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_88258688_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUST00000204545.3	chr6	+	1932	12	FSM	ENSMUSG00000038388.15	ENSMUST00000204545.3	2418	12	-29	515	0	0	multi-exon	FALSE	canonical	3	15	junction_1	329.215822601587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTGCGCATCAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	50087228	50175404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_50087445_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ENSMUST00000204570.2	chr5	-	375	2	FSM	ENSMUSG00000108207.3	ENSMUST00000204570.2	690	2	315	0	291	0	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATGTGTCTGTATCAT	NA	False	NA	-5	True	ATTAAA	-13	NA	148896199	148895407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_148895541_148895957
ENSMUST00000204596.2-1	chr6	-	1776	4	FSM	ENSMUSG00000030057.16	ENSMUST00000204596.2	911	4	-8	-857	0	0	multi-exon	FALSE	canonical	3	8336	junction_2	1451.03694722851	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828012	87820063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87821139_87822103_87822540_87822637_87822776_87827885
ENSMUST00000204598.3	chr6	-	1743	7	FSM	ENSMUSG00000055239.11	ENSMUST00000204598.3	1743	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	409.390196918946	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTGTGTGTATTTAT	9152	False	NA	-84	True	NA	NA	NA	72876275	72819551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72875962
ENSMUST00000204626.3	chr6	+	4381	14	FSM	ENSMUSG00000001632.17	ENSMUST00000204626.3	4381	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	42.213040975537	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGTAATTATTGGAGA	408	False	NA	NA	False	NA	NA	NA	113284273	113301584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUST00000204647.3	chr5	+	3381	26	FSM	ENSMUSG00000037890.14	ENSMUST00000204647.3	3381	26	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	5.73606136647787	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTGCATGCCCCCTAT	8571	False	NA	NA	False	NA	NA	NA	65357059	65401929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462
ENSMUST00000204652.2	chr6	-	2646	1	FSM	ENSMUSG00000107633.2	ENSMUST00000204652.2	2646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGCACATCCAACAAT	NA	False	NA	NA	False	NA	NA	NA	128842157	128839511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128839500_128842200
ENSMUST00000204653.3	chr6	-	2175	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	0	0	0	0	multi-exon	FALSE	canonical	3	7593	junction_2	1716.19673988736	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	AGTAAA	-12	NA	87828088	87819596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ENSMUST00000204655.3	chr6	-	3526	24	FSM	ENSMUSG00000030279.16	ENSMUST00000204655.3	3526	24	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	28.8381180218075	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCTGTAGAATTGCCTGA	NA	False	NA	NA	False	TTTAAA	-17	NA	143045493	142957207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
ENSMUST00000204671.3	chr6	-	744	5	FSM	ENSMUSG00000030122.13	ENSMUST00000204671.3	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	276.631975736718	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTGGGGCCAAGCCC	8034	False	NA	-44	True	NA	NA	NA	124897066	124890726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124897001
ENSMUST00000204673.2	chr8	-	2464	3	FSM	ENSMUSG00000038506.14	ENSMUST00000204673.2	2464	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTGATGTCCTTTATT	NA	False	NA	-4	True	AATAAA	-13	NA	13338124	13305964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13307977_13321589_13321721_13337803
ENSMUST00000204696.3	chr6	+	734	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	64	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGCAGAGCATTATGGA	1954	False	NA	5	True	AATAAA	-15	NA	65019819	65021187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_65019946_65020189_65020430_65020819
ENSMUST00000204702.3	chr3	+	3759	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	54	5666	0	853	multi-exon	FALSE	canonical	3	15	junction_16	4.58930587290297	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTGAAAACTTGGC	NA	False	NA	4	True	ATTAAA	-21	NA	40699915	40744872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ENSMUST00000204714.2	chr6	-	452	5	FSM	ENSMUSG00000029632.8	ENSMUST00000204714.2	452	5	0	0	0	0	multi-exon	FALSE	canonical	3	1509	junction_4	3332.42722163591	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGCGTGTCACTATTTA	NA	False	NA	-15	True	AATAAA	-11	NA	11907496	11900374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322_11907384_11907471
ENSMUST00000204734.2	chr6	-	1942	1	FSM	ENSMUSG00000107951.2	ENSMUST00000204734.2	1942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTAAGAAGAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	75275042	75273100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_75273100_75275000
ENSMUST00000204751.3	chr6	+	6350	27	FSM	ENSMUSG00000030016.15	ENSMUST00000204751.3	9033	27	4	2679	0	0	multi-exon	FALSE	canonical	3	28	junction_1	85.3890158256238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891352	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ENSMUST00000204759.2	chr6	-	544	4	FSM	ENSMUSG00000087341.5	ENSMUST00000204759.2	544	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	5.43650214343336	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCACCTCACCATCTGTCG	NA	False	NA	NA	False	NA	NA	NA	108590956	108587293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_108587583_108589268_108589394_108590092_108590176_108590909
ENSMUST00000204765.3	chr6	+	1738	12	FSM	ENSMUSG00000002871.15	ENSMUST00000204765.3	1738	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	17.59319928714	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTGTGAGCTGATGCCT	NA	False	NA	12	True	AATAAA	-14	NA	88879314	88889213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ENSMUST00000204778.3	chr6	-	3382	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	828	False	NA	-5	True	AATAAA	-18	NA	51989529	51834401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ENSMUST00000204778.3-0	chr6	-	1638	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	0	1744	0	0	multi-exon	FALSE	canonical	3	457	junction_9	27.4919180043073	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGACTTAGCCTGGTA	828	False	NA	-7	True	AATAAA	-18	NA	51989529	51836145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ENSMUST00000204804.3	chr6	+	6077	12	FSM	ENSMUSG00000030104.10	ENSMUST00000204804.3	6077	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	94.2706671117053	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTCTCCTTTGCATG	NA	False	NA	18	True	ATTAAA	-23	NA	108805601	108836317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828464_108829450_108829548_108831205_108831410_108832427
ENSMUST00000204827.3	chr6	+	4707	43	FSM	ENSMUSG00000034023.17	ENSMUST00000204827.3	4707	43	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_38	50.0643576738687	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTTTTGCCTCAGCTAC	NA	False	NA	7	True	AATAAA	-8	NA	113508664	113573234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ENSMUST00000204877.2	chr6	-	601	1	FSM	ENSMUSG00000107990.2	ENSMUST00000204877.2	601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGGTTCTAGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	49057996	49057395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_49057400_49058000
ENSMUST00000204878.3	chr6	-	3071	6	FSM	ENSMUSG00000037788.15	ENSMUST00000204878.3	769	6	-4	-2298	0	0	multi-exon	FALSE	canonical	2	6	junction_5	6.01331855134916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTGTGATTTTTTTGG	NA	False	NA	-2	True	AATAAA	-14	NA	57802139	57729249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57785520_57785678_57801911
ENSMUST00000204885.2	chr6	-	1554	2	FSM	ENSMUSG00000004980.17	ENSMUST00000204885.2	1554	2	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATACTTTTGTATC	NA	False	NA	-45	True	AATACA	-9	NA	51440164	51438124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51438414_51438899
ENSMUST00000204890.3	chr6	-	1614	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_3	4411.10218652889	8344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828012	87820063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822655_87822776_87827885
ENSMUST00000204902.2	chr6	-	706	2	FSM	ENSMUSG00000004980.17	ENSMUST00000204902.2	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	6471	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAGAAATGAGTGTA	NA	False	NA	NA	False	AATAGA	-31	NA	51443217	51441611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51442222_51443121
ENSMUST00000204910.2	chr6	-	2711	1	FSM	ENSMUSG00000107495.2	ENSMUST00000204910.2	2711	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTCTAACTGCACCAAG	NA	False	NA	NA	False	NA	NA	NA	128670746	128668035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128668000_128670700
ENSMUST00000204935.2	chr6	+	318	1	FSM	ENSMUSG00000108125.2	ENSMUST00000204935.2	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGGTAGAAGCGCCTGC	NA	False	NA	NA	False	CATAAA	-5	NA	120885633	120885951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_120885600_120886000
ENSMUST00000204944.2	chr6	+	2367	1	FSM	ENSMUSG00000036371.7	ENSMUST00000204944.2	2367	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAAGCAACTCT	5849	False	NA	NA	False	ATTAAA	-27	NA	67243971	67246338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_67244000_67246300
ENSMUST00000204946.2	chr6	-	2094	1	FSM	ENSMUSG00000107971.2	ENSMUST00000204946.2	2094	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGACAAACCTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	120891954	120889860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120889900_120892000
ENSMUST00000204962.2	chr2	-	2698	1	FSM	ENSMUSG00000075376.11	ENSMUST00000204962.2	2698	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAATGAAATAAT	NA	False	NA	NA	False	ACTAAA	-23	NA	37289600	37286902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_37286900_37289600
ENSMUST00000204965.3	chr5	-	4751	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_12	80.615847887097	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493013	65419194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUST00000204978.3	chr6	-	610	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	8511	junction_2	453.262494465281	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTTGAATTTCTCTTA	-31	True	NA	69	True	ACTAAA	-17	NA	11907482	11900290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
ENSMUST00000205002.3	chr6	-	1181	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	-11	275	0	0	multi-exon	FALSE	canonical	3	1115	junction_7	83.3223259396904	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAGAGTCACTCTATT	NA	False	NA	-48	True	NA	NA	NA	126826099	126798958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ENSMUST00000205026.3	chr6	+	2816	16	FSM	ENSMUSG00000030231.12	ENSMUST00000205026.3	2816	16	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_15	16.4681510801911	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140489878	140542836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
ENSMUST00000205075.2	chr6	-	1956	3	FSM	ENSMUSG00000045009.10	ENSMUST00000205075.2	1956	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAAAAGCACTTTTG	4323	False	NA	NA	False	NA	NA	NA	113478854	113473260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_113474049_113474232_113475357_113478810
ENSMUST00000205091.3	chr6	+	1166	7	FSM	ENSMUSG00000036371.7	ENSMUST00000205091.3	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2347.58275797799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5872	False	NA	19	True	NA	NA	NA	67243994	67261031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_67244394_67248181_67248305_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUST00000205118.3	chr6	+	600	3	FSM	ENSMUSG00000029920.10	ENSMUST00000205118.3	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	73	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTTTTGGAAATCTCCA	1785	False	NA	-67	True	AATAAA	-25	NA	65019650	65021115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_65019715_65020189_65020430_65020819
ENSMUST00000205204.2	chr6	-	3645	4	FSM	ENSMUSG00000004980.17	ENSMUST00000205204.2	3645	4	0	0	0	0	multi-exon	FALSE	canonical	3	6516	junction_1	740.728170263709	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATAGCAGGGTCCT	NA	False	NA	NA	False	AAAAAG	-5	NA	51446864	51442797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_51443385_51443474_51443686_51443885_51444033_51444164
ENSMUST00000205208.3	chr6	+	1759	14	FSM	ENSMUSG00000030281.17	ENSMUST00000205208.3	1759	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8.92241376846094	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	7123	False	NA	6	True	AATAAA	-21	NA	113449754	113460101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ENSMUST00000205243.2	chr6	+	720	2	FSM	ENSMUSG00000029815.13	ENSMUST00000205243.2	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTTATAGCCCAATCT	574	False	NA	NA	False	NA	NA	NA	49051007	49060468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_49051038_49059778
ENSMUST00000205262.2	chr7	-	3036	20	FSM	ENSMUSG00000030766.16	ENSMUST00000205262.2	3036	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	60.4560690757234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAACAAAACA	NA	False	NA	NA	False	AATATA	-10	NA	122969108	122878607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUST00000205266.2	chr7	-	2513	2	FSM	ENSMUSG00000047371.8	ENSMUST00000205266.2	2513	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTCGTCCTTAAGATGT	5155	False	NA	-1	True	AATAAA	-16	NA	126944761	126941966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126944039_126944320
ENSMUST00000205269.2	chr6	-	1161	3	FSM	ENSMUSG00000063884.7	ENSMUST00000205269.2	1161	3	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_1	68	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	NA	False	NA	-1	True	AATAAA	-28	NA	71859579	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71858216_71858489_71858649_71859171
ENSMUST00000205271.2	chr7	-	1942	6	FSM	ENSMUSG00000054499.10	ENSMUST00000205271.2	1942	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	41.775590959315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCCAGGCTCTCCGGTAC	NA	False	NA	-9	True	AATAAA	-26	NA	24920040	24902265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919188_24919353_24919993
ENSMUST00000205276.2	chr7	-	4046	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	184	3463	0	0	multi-exon	FALSE	canonical	3	39	junction_14	16.3198636678896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAGAAAAA	3690	False	NA	NA	False	NA	NA	NA	98305802	98239806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ENSMUST00000205287.2	chr7	+	1375	6	FSM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	529.055913869224	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTTCTTTATTTT	2173	False	NA	NA	False	NA	NA	NA	3696761	3703886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
ENSMUST00000205316.2	chr7	-	2912	7	FSM	ENSMUSG00000042502.11	ENSMUST00000205316.2	2912	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_6	218.502034061216	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTGGTAATTTAATAAA	5471	False	NA	-1	True	NA	NA	NA	126795159	126791196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126795100
ENSMUST00000205328.2	chr7	-	3597	20	FSM	ENSMUSG00000003378.10	ENSMUST00000205328.2	3597	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	1.69568459932495	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAATACCTGGGTTTTA	9390	False	NA	-6	True	AATAAA	-22	NA	24771526	24709273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_24710220_24713010_24713133_24713214_24713344_24714729_24714956_24715232_24715399_24721865_24722040_24722410_24722521_24722707_24722822_24745598_24745803_24757708_24757817_24757918_24758024_24758365_24758519_24759894_24760057_24760154_24760209_24762302_24762482_24764553_24764720_24764797_24764896_24767409_24767600_24767868_24767998_24771464
ENSMUST00000205335.2	chr6	-	3387	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_3	40.6724095420862	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416539	72409781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUST00000205338.2	chr7	-	2071	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	16.2845785944863	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	41042803	41023213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
ENSMUST00000205340.2	chr7	-	3366	10	FSM	ENSMUSG00000030733.11	ENSMUST00000205340.2	3366	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	82.2103595046059	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGCTGTGGCTGATAT	8177	False	NA	-4	True	AATAAA	-25	NA	126074302	126066168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ENSMUST00000205352.2	chr7	-	2145	1	FSM	ENSMUSG00000044702.14	ENSMUST00000205352.2	2145	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	121732208	121730063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_121730100_121732200
ENSMUST00000205360.2	chr7	-	1344	2	FSM	ENSMUSG00000045282.8	ENSMUST00000205360.2	1344	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGTGTCACCATTAT	2191	False	NA	NA	False	AGTAAA	-12	NA	4633186	4631040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4631753_4632554
ENSMUST00000205364.2	chr7	+	2296	1	FSM	ENSMUSG00000049739.11	ENSMUST00000205364.2	2296	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACAAAACTGACTCGA	183	False	NA	NA	False	NA	NA	NA	127475392	127477688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127475400_127477700
ENSMUST00000205406.2	chr17	-	714	4	FSM	ENSMUSG00000118642.2	ENSMUST00000205406.2	714	4	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGCCTCACTAAACCAT	NA	False	NA	NA	False	NA	NA	NA	40159718	40158993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_40159024_40159025_40159488_40159492_40159526_40159529
ENSMUST00000205407.2	chr7	-	1412	11	FSM	ENSMUSG00000030491.17	ENSMUST00000205407.2	1412	11	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_10	140.166365437647	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCTCTTAAAATATTT	NA	False	NA	-10	True	AATAAA	-36	NA	35237118	35193033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35236938
ENSMUST00000205432.3	chr7	+	4166	18	FSM	ENSMUSG00000042423.10	ENSMUST00000205432.3	4166	18	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_6	6.52702659137892	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTACCCTCCGGCTCCT	NA	False	NA	29	True	TATAAA	-23	NA	127078370	127090678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ENSMUST00000205434.2	chr7	+	2765	14	FSM	ENSMUSG00000030523.19	ENSMUST00000205434.2	2765	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	349.928648686554	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATCTTAGATGAATTG	NA	False	NA	13	True	AATAAA	-18	NA	63835297	63874512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438
ENSMUST00000205440.2	chr7	-	3089	11	FSM	ENSMUSG00000030733.11	ENSMUST00000205440.2	3089	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	107.550034867498	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8217	False	NA	-1	True	AATAAA	-28	NA	126074262	126066165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650_126072788_126074167
ENSMUST00000205495.2	chr7	+	2276	1	FSM	ENSMUSG00000030779.17	ENSMUST00000205495.2	2276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTGTTGCAAATGTATA	NA	False	NA	12	True	AATAAA	-18	NA	122599501	122601777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_122599500_122601800
ENSMUST00000205497.2	chr7	-	2854	9	FSM	ENSMUSG00000030733.11	ENSMUST00000205497.2	2854	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	88.9690957580215	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATCATGATGGCTGTG	8257	False	NA	-12	True	AATAAA	-17	NA	126074222	126066176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126066946_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ENSMUST00000205534.2	chr7	+	3511	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	11.4127122105133	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGTAAGAAAAATAT	3327	False	NA	NA	False	NA	NA	NA	27560009	27580250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
ENSMUST00000205548.2	chr7	-	2363	3	FSM	ENSMUSG00000090862.4	ENSMUST00000205548.2	2363	3	0	0	0	0	multi-exon	FALSE	canonical	3	9102	junction_2	1081.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	115933370	115930746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115933010_115933134_115933184_115933319
ENSMUST00000205568.2	chr7	-	2650	6	FSM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	289.408085581588	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	256	False	NA	-27	True	AATAAA	-18	NA	126625698	126621301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ENSMUST00000205650.2	chr4	-	6297	48	FSM	ENSMUSG00000028556.16	ENSMUST00000205650.2	6297	48	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	16.1052727349995	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACACTTGTTCTATTC	NA	False	NA	NA	False	NA	NA	NA	99008999	98825494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ENSMUST00000205651.2	chr7	+	2627	7	FSM	ENSMUSG00000042423.10	ENSMUST00000205651.2	2627	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.30403793359983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTCTCCAGGGGTAGCA	2188	False	NA	NA	False	AATACA	-30	NA	127086020	127090883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ENSMUST00000205658.2	chr7	+	995	4	FSM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	1.69967317119759	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGCCTCCTTGTATC	NA	False	NA	8	True	AATAAA	-19	NA	25380204	25385983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_25380404_25380807_25380900_25382715_25382842_25385405
ENSMUST00000205681.2	chr6	+	752	1	FSM	ENSMUSG00000034744.14	ENSMUST00000205681.2	752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83773223	83773975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_83773200_83774000
ENSMUST00000205691.2	chr6	-	2364	9	FSM	ENSMUSG00000063884.7	ENSMUST00000205691.2	2364	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	328.920963150724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTCTTTGTAAGCGTG	NA	False	NA	-6	True	AATAAA	-23	NA	71866663	71857626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577
ENSMUST00000205694.2	chr7	+	4074	20	FSM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	0	1205	0	0	multi-exon	FALSE	canonical	3	259	junction_5	49.1177002358039	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTCCATTTGGTC	NA	False	NA	21	True	AATAAA	-22	NA	127187938	127202766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ENSMUST00000205701.2	chr7	+	3437	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	40.2639727299729	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATACACAAGCCTA	408	False	NA	NA	False	AAGAAA	-4	NA	27538031	27555863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ENSMUST00000205711.2	chr7	-	1373	1	FSM	ENSMUSG00000052997.16	ENSMUST00000205711.2	1373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCTGCATACTTGTCA	NA	False	NA	-26	True	AATAAA	-1	NA	33841511	33840138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33840100_33841500
ENSMUST00000205731.2	chr7	+	2575	11	FSM	ENSMUSG00000030523.19	ENSMUST00000205731.2	2575	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	225.867682504603	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGGCTCTTTGACTCAT	NA	False	NA	NA	False	NA	NA	NA	63835302	63868483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237
ENSMUST00000205733.2	chr7	-	2956	9	FSM	ENSMUSG00000030733.11	ENSMUST00000205733.2	2956	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	111.235111363274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	8485	False	NA	-6	True	AATAAA	-23	NA	126073994	126066170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126066946_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126073790
ENSMUST00000205748.2	chr7	+	1492	5	FSM	ENSMUSG00000074887.5	ENSMUST00000205748.2	1492	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	99.780697031039	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCAGCTCAAAGTCTTC	9998	False	NA	NA	False	NA	NA	NA	42863462	42876266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_42863572_42870265_42870330_42872998_42873126_42873324_42873386_42875135
ENSMUST00000205802.2	chr6	-	1854	1	FSM	ENSMUSG00000034203.9	ENSMUST00000205802.2	1854	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91450431	91448577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_91448600_91450400
ENSMUST00000205822.2	chr7	+	3760	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	14.4283580075107	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTGAAGGGCTTTGC	5617	False	NA	28	True	AATAAA	-30	NA	79848188	79876159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUST00000205854.2	chr19	-	2584	4	FSM	ENSMUSG00000074733.15	ENSMUST00000205854.2	466	4	22	-2140	0	0	multi-exon	FALSE	canonical	2	4	junction_1	21.5148527508066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTTTGGTCATGGTG	NA	False	NA	-4	True	NA	NA	NA	61129233	61103421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_61105727_61115444_61115506_61115875_61116003_61129142
ENSMUST00000205862.2	chr7	-	1984	1	FSM	ENSMUSG00000030697.8	ENSMUST00000205862.2	1984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAAGGTAGACCT	5070	False	NA	NA	False	NA	NA	NA	126391668	126389684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126389700_126391700
ENSMUST00000205870.2	chr7	-	933	8	FSM	ENSMUSG00000036427.6	ENSMUST00000205870.2	933	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	722.37185856096	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGTATTTCACACCCC	NA	False	NA	-88	True	NA	NA	NA	33907323	33901630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907115_33907184_33907281
ENSMUST00000205879.2	chr7	-	1747	2	FSM	ENSMUSG00000030697.8	ENSMUST00000205879.2	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	1828	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAGAAAAAG	5084	False	NA	NA	False	NA	NA	NA	126391654	126389708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126391396_126391594
ENSMUST00000205909.2	chr19	+	709	9	FSM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	124.260814418706	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701368	8703807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUST00000205927.2	chr7	-	2630	6	FSM	ENSMUSG00000030421.10	ENSMUST00000205927.2	2630	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	385.378463331827	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGCCTGCTTTATCT	NA	False	NA	-6	True	ATTAAA	-23	NA	37669053	37659417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37669030
ENSMUST00000205933.2	chr7	-	458	3	FSM	ENSMUSG00000030669.14	ENSMUST00000205933.2	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	4	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAAGTCATCGGGTGAG	2085	False	NA	NA	False	NA	NA	NA	114235541	114233575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_114233844_114234361_114234457_114235446
ENSMUST00000205960.2	chr7	+	1992	10	FSM	ENSMUSG00000030523.19	ENSMUST00000205960.2	1992	10	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_5	65.6911967719673	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835128	63861175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
ENSMUST00000205961.2	chr7	-	2021	10	FSM	ENSMUSG00000001247.17	ENSMUST00000205961.2	2021	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	47.1029867208513	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTAAGCCTCTTGTTT	NA	False	NA	-7	True	AATAAA	-13	NA	30672747	30657203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30657327_30657413_30658046_30658174_30658307_30658399_30658460_30658577_30658740_30661522_30661670_30662235_30662293_30665393_30665514_30671292_30671638_30672504
ENSMUST00000205977.2	chr7	-	4495	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	-146	-3458	0	-1882	multi-exon	FALSE	canonical	3	31	junction_1	191.890176924198	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGTGTGTATCCACTGT	NA	False	NA	-12	True	GATAAA	-12	NA	127307957	127262509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ENSMUST00000206019.2	chr7	+	2299	2	FSM	ENSMUSG00000055652.15	ENSMUST00000206019.2	2299	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGCTGAAGGAGAAGCA	NA	False	NA	NA	False	AATAAA	-18	NA	75498088	75517239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_75498233_75515084
ENSMUST00000206026.2	chr7	-	2906	7	FSM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	225.562999329825	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGAGTCTGCGCCCAG	5520	False	NA	28	True	NA	NA	NA	126795110	126791167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126795086
ENSMUST00000206039.2	chr7	+	2194	4	FSM	ENSMUSG00000048897.16	ENSMUST00000206039.2	2194	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	115.519118186847	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACACGTTGAGTGCTGT	NA	False	NA	1	True	AATAAA	-9	NA	79676134	79736594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181
ENSMUST00000206053.2	chr7	-	606	3	FSM	ENSMUSG00000096145.3	ENSMUST00000206053.2	606	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	149.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTAGCATATGTCTG	NA	False	NA	-13	True	AATAAA	-17	NA	127494423	127492236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127492664_127493676_127493787_127494354
ENSMUST00000206071.2	chr7	+	1014	3	FSM	ENSMUSG00000030801.11	ENSMUST00000206071.2	1014	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACAAAGTATGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	127511687	127515262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127511915_127514399_127514475_127514550
ENSMUST00000206084.2	chr7	-	772	7	FSM	ENSMUSG00000030538.16	ENSMUST00000206084.2	772	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	282.60317683203	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2299	False	NA	-12	True	AATAAA	-15	NA	79882313	79876906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878282_79880063_79880173_79882091_79882127_79882257
ENSMUST00000206126.2	chr7	+	3297	12	FSM	ENSMUSG00000052707.9	ENSMUST00000206126.2	3297	12	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	19.5092688291472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	122779143	122792953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ENSMUST00000206135.2	chr19	+	744	8	FSM	ENSMUSG00000108414.2	ENSMUST00000206135.2	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	116.047316176794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8701521	8703807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8701554_8701766_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUST00000206155.2	chr19	+	605	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	203.637719952995	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTGATGGCTTATTT	NA	False	NA	26	True	AATAAA	-15	NA	8700838	8703807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUST00000206184.2	chr7	+	3990	6	FSM	ENSMUSG00000057101.9	ENSMUST00000206184.2	827	6	-23	-3140	0	0	multi-exon	FALSE	canonical	3	9	junction_3	37.880865882395	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAGATGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	23781348	23807123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_23781664_23784850_23784932_23785912_23786017_23797245_23797321_23800872_23800994_23803829
ENSMUST00000206194.2	chr7	+	532	3	FSM	ENSMUSG00000033429.11	ENSMUST00000206194.2	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	103	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042522	64061869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_64042592_64049916_64050093_64061582
ENSMUST00000206254.2	chr7	-	2282	6	FSM	ENSMUSG00000030678.8	ENSMUST00000206254.2	2282	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	257.403496479749	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCTCTGAGTTCCTAA	NA	False	NA	-32	True	AATAAA	-13	NA	126626196	126621306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
ENSMUST00000206264.2	chr7	-	795	1	FSM	ENSMUSG00000108366.2	ENSMUST00000206264.2	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGATTTTTAATAGTG	NA	False	NA	NA	False	NA	NA	NA	16453835	16453040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16453000_16453800
ENSMUST00000206331.2	chr7	+	4333	1	FSM	ENSMUSG00000035632.17	ENSMUST00000206331.2	4333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGTGGATAGTCCAG	2728	False	NA	38	True	NA	NA	NA	3648266	3652599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_3648300_3652600
ENSMUST00000206358.2	chr7	-	3009	1	FSM	ENSMUSG00000097415.3	ENSMUST00000206358.2	3009	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTAGTGGTCTTGCCC	NA	False	NA	0	True	NA	NA	NA	75421794	75418785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_75418800_75421800
ENSMUST00000206362.2	chr7	-	2932	4	FSM	ENSMUSG00000074283.6	ENSMUST00000206362.2	2932	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.93025150224688	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTTACATCTTATACT	NA	False	NA	NA	False	NA	NA	NA	23936985	23926996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_23929266_23933775_23933903_23936042_23936101_23936507
ENSMUST00000206384.2	chr7	-	1831	1	FSM	ENSMUSG00000108494.2	ENSMUST00000206384.2	1831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGAAAAGAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	79762382	79760551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79760600_79762400
ENSMUST00000206389.2	chr7	-	3737	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGTGTATATGTGAAT	NA	False	NA	NA	False	AAGAAA	-5	NA	97387496	97373212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97375912_97378177_97378295_97386575
ENSMUST00000206389.2-0	chr7	-	1133	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	231	2373	-120	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTAGTAACTGTGAT	NA	False	NA	-1	True	ATTAAA	-43	NA	97387265	97375585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_97375912_97378177_97378295_97386575
ENSMUST00000206399.2	chr7	-	4158	14	FSM	ENSMUSG00000066571.14	ENSMUST00000206399.2	4158	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.1350090783308	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATCCCTATGT	9837	False	NA	NA	False	GATAAA	-19	NA	34012947	33937004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_34011513_34011602_34012911
ENSMUST00000206400.2	chr6	-	2144	10	FSM	ENSMUSG00000006906.11	ENSMUST00000206400.2	2144	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.1146783737236	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGAGTGATTTGTCTGA	NA	False	NA	-10	True	AATAAA	-20	NA	83549415	83520198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549323
ENSMUST00000206405.2	chr7	+	1428	4	FSM	ENSMUSG00000074887.5	ENSMUST00000206405.2	1428	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_3	24.5356882927706	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCAGCTCAAAGTCTTC	9998	False	NA	NA	False	NA	NA	NA	42863462	42876266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_42863572_42872998_42873126_42873324_42873386_42875135
ENSMUST00000206413.2	chr7	-	3643	23	FSM	ENSMUSG00000040488.19	ENSMUST00000206413.2	3643	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	89.041092287227	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCCAGTTTGTAACT	NA	False	NA	NA	False	NA	NA	NA	27033073	27010984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27011238_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ENSMUST00000206414.2	chr7	-	2310	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGACTCTGTTCTGGGT	NA	False	NA	NA	False	GATAAA	-18	NA	98010495	98000074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98002338_98010448
ENSMUST00000206429.2	chr7	+	638	3	FSM	ENSMUSG00000051768.10	ENSMUST00000206429.2	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	18.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGATTGAAGGGGGTACG	NA	False	NA	NA	False	NA	NA	NA	24269281	24270351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24269735_24269873_24270004_24270296
ENSMUST00000206473.2	chr7	-	436	1	FSM	ENSMUSG00000108645.2	ENSMUST00000206473.2	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGGTGAAGATCCACGCC	NA	False	NA	NA	False	NA	NA	NA	63852272	63851836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_63851800_63852300
ENSMUST00000206499.2	chr7	-	864	9	FSM	ENSMUSG00000074358.10	ENSMUST00000206499.2	864	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	48.8671668914825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCATCGCCAGGTGCTC	NA	False	NA	NA	False	NA	NA	NA	18627884	18624929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627703_18627775_18627859
ENSMUST00000206508.2	chr7	+	3195	29	FSM	ENSMUSG00000040940.19	ENSMUST00000206508.2	3195	29	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	75.6323006258515	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGGCGTT	8573	False	NA	36	True	AATATA	-18	NA	24602480	24626019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUST00000206536.2	chr7	-	454	3	FSM	ENSMUSG00000030654.10	ENSMUST00000206536.2	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	2507	junction_2	41.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGAATTTCATACCTG	NA	False	NA	NA	False	NA	NA	NA	117728795	117725522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_117725739_117726356_117726491_117728691
ENSMUST00000206570.2	chr7	-	1400	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	0	0	0	0	multi-exon	FALSE	canonical	3	2424	junction_1	142.291307979548	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGGTTCTGTCAGGTT	5226	False	NA	NA	False	AATAAA	-13	NA	126391512	126385039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
ENSMUST00000206574.2	chr7	+	1286	11	FSM	ENSMUSG00000030763.8	ENSMUST00000206574.2	1286	11	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	37.2322440903043	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGCTACATCTGTACA	6898	False	NA	22	True	AATAAA	-22	NA	122977278	123029572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003712_123009950_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUST00000206575.2	chr7	+	1157	6	FSM	ENSMUSG00000075701.11	ENSMUST00000206575.2	1157	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	154.225808475754	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACAGTCTCTGGTTTTTC	NA	False	NA	5	True	AGTAAA	-14	NA	65729425	65739151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737017_65738514
ENSMUST00000206577.2	chr7	-	3894	24	FSM	ENSMUSG00000032637.16	ENSMUST00000206577.2	3894	24	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	297.839161883737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGACTTTTACTTTTTA	9496	False	NA	-78	True	NA	NA	NA	126102527	126090957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126091388_126091615_126091781_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ENSMUST00000206581.2	chr7	-	1753	11	FSM	ENSMUSG00000030421.10	ENSMUST00000206581.2	1753	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	282.189014669246	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGGCTTCGTTAATTC	NA	False	NA	-5	True	AGTAAA	-20	NA	37722976	37660788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37722859
ENSMUST00000206589.2	chr11	-	8333	43	FSM	ENSMUSG00000025153.10	ENSMUST00000206589.2	8333	43	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	127.303441036656	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCCCACAATTAAACTGCA	NA	False	NA	-40	True	NA	NA	NA	120714921	120697930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705308_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ENSMUST00000206594.2	chr9	+	7159	13	FSM	ENSMUSG00000032384.17	ENSMUST00000206594.2	2482	13	-102	-4575	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.24377127070024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGTTTCATTAGCTG	NA	False	NA	27	True	AATAAA	-28	NA	65816267	65952297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65816451_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ENSMUST00000206598.2	chr19	-	1393	8	FSM	ENSMUSG00000010095.14	ENSMUST00000206598.2	1393	8	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_7	103.964868477534	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACCCCTGCCTCATGA	NA	False	NA	12	True	AATAAA	-2	NA	8690349	8684950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093
ENSMUST00000206618.2	chr7	-	1016	1	FSM	ENSMUSG00000030538.16	ENSMUST00000206618.2	1016	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGCTAAGAAT	2283	False	NA	NA	False	NA	NA	NA	79882329	79881313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_79881300_79882300
ENSMUST00000206664.2	chr7	-	2909	10	FSM	ENSMUSG00000030733.11	ENSMUST00000206664.2	2909	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	113.335294100686	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGATGGCTGTGGCTGAT	9850	False	NA	-6	True	AATAAA	-23	NA	126072240	126066170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126068659_126068743_126070293_126070470_126070566_126070659_126070871_126070974_126071244
ENSMUST00000206685.2	chr7	-	3940	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	22.29798197147	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGTAAAAACTATAA	NA	False	NA	NA	False	TTTAAA	-28	NA	27678572	27660785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ENSMUST00000206687.2	chr7	-	3116	6	FSM	ENSMUSG00000074272.11	ENSMUST00000206687.2	1061	6	-69	-1986	0	0	multi-exon	FALSE	canonical	3	9	junction_2	9.62081077664455	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	2848	False	NA	-1	True	AATAAA	-21	NA	25177028	25161131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25175768_25176129_25176895
ENSMUST00000206692.2	chr6	-	1400	9	FSM	ENSMUSG00000053907.11	ENSMUST00000206692.2	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	259.956697115116	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATACTTTCGCCATGA	NA	False	NA	NA	False	AATAAA	-25	NA	72416539	72411527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72411723_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUST00000206727.2	chr7	+	548	2	FSM	ENSMUSG00000030763.8	ENSMUST00000206727.2	548	2	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGCTACATCTGTAC	NA	False	NA	21	True	AATAAA	-21	NA	123027082	123029571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_123027415_123029355
ENSMUST00000206766.2	chr7	+	1234	1	FSM	ENSMUSG00000040824.4	ENSMUST00000206766.2	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTCTCCTGCCTCCA	NA	False	NA	NA	False	NA	NA	NA	18883783	18885017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_18883800_18885000
ENSMUST00000206782.2	chr7	-	785	1	FSM	ENSMUSG00000030402.6	ENSMUST00000206782.2	785	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACATTTTAATGTAGTG	NA	False	NA	NA	False	AAAAAG	-28	NA	19013526	19012741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19012700_19013500
ENSMUST00000206783.2	chr6	-	755	1	FSM	ENSMUSG00000053907.11	ENSMUST00000206783.2	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGACTGCCACTGACT	NA	False	NA	NA	False	NA	NA	NA	72416539	72415784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_72415800_72416500
ENSMUST00000206805.2	chr7	-	3354	1	FSM	ENSMUSG00000030660.10	ENSMUST00000206805.2	3354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGAACTTGGCTGT	NA	False	NA	NA	False	ATTAAA	-39	NA	115939864	115936510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_115936500_115939900
ENSMUST00000206832.2	chr7	-	3784	15	FSM	ENSMUSG00000040725.14	ENSMUST00000206832.2	3784	15	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_14	88.3957070247654	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAGGGTTGAAACCCT	9542	False	NA	-28	True	AATAAA	-25	NA	25454182	25420589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ENSMUST00000206875.2	chr7	+	436	2	FSM	ENSMUSG00000063065.14	ENSMUST00000206875.2	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCAGCAAAGTAACTTT	5275	False	NA	NA	False	NA	NA	NA	126358831	126360179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_126358991_126359902
ENSMUST00000206882.2	chr7	+	391	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTATTTGTTATTTGA	NA	False	NA	21	True	ATTAAA	-22	NA	64042487	64061869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_64042592_64061582
ENSMUST00000206893.2	chr7	+	3449	10	FSM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	29.4282974593846	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	3032	False	NA	15	True	TATAAA	-19	NA	127347445	127368655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ENSMUST00000206947.2	chr6	+	618	4	FSM	ENSMUSG00000034192.6	ENSMUST00000206947.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	1484	junction_1	387.955610290089	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTTTTTTTTTAATG	NA	False	NA	42	True	ATTAAA	-18	NA	91493029	91499602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
ENSMUST00000206953.2	chr7	-	548	3	FSM	ENSMUSG00000030678.8	ENSMUST00000206953.2	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	166.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTCAGCCACTTCC	1650	False	NA	NA	False	NA	NA	NA	126624304	126622221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126622341_126623615_126623788_126624047
ENSMUST00000206960.2	chr7	-	2130	3	FSM	ENSMUSG00000074283.6	ENSMUST00000206960.2	2130	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCAGATTTCACTGGGGA	NA	False	NA	NA	False	NA	NA	NA	23936650	23927405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_23929266_23933775_23933903_23936507
ENSMUST00000206974.2	chr6	-	2442	1	FSM	ENSMUSG00000014554.14	ENSMUST00000206974.2	2442	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAAATAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	83467402	83464960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_83465000_83467400
ENSMUST00000206984.2	chr7	+	2794	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	35.6279671159656	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATAGCATTGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	97437747	97561090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ENSMUST00000206984.2-0	chr7	+	2193	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	0	601	0	0	multi-exon	TRUE	canonical	3	118	junction_1	35.6279671159656	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTTCCTGATCTAGTG	NA	False	NA	45	True	NA	NA	NA	97437747	97560489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ENSMUST00000207008.2	chr7	-	1628	1	FSM	ENSMUSG00000108533.2	ENSMUST00000207008.2	1628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTGCTCAGCCTGCT	NA	False	NA	NA	False	NA	NA	NA	65130969	65129341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_65129300_65131000
ENSMUST00000207015.2	chr6	+	1494	3	FSM	ENSMUSG00000052337.16	ENSMUST00000207015.2	1494	3	0	0	0	0	multi-exon	FALSE	canonical	3	1469	junction_1	25	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTACTCTATCCCTTTT	NA	False	NA	9	True	AATAAA	-16	NA	71848116	71852238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71848543_71849777_71849908_71851300
ENSMUST00000207023.2	chr6	-	4753	26	FSM	ENSMUSG00000053470.14	ENSMUST00000207023.2	4753	26	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_25	126.668929102602	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71609974	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609821
ENSMUST00000207030.2	chr7	-	2178	3	FSM	ENSMUSG00000061374.15	ENSMUST00000207030.2	2178	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	219.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTACTGAAAGAAGATCAG	3241	False	NA	NA	False	NA	NA	NA	5017268	5010557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_5012205_5015676_5016022_5017082
ENSMUST00000207038.2	chr10	+	7241	7	FSM	ENSMUSG00000039835.17	ENSMUST00000207038.2	4854	7	-468	-1919	-468	0	multi-exon	FALSE	canonical	2	10	junction_1	9.68532681717842	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTGTATGTGCATTTA	NA	False	NA	22	True	AATAAA	-26	NA	18194264	18409640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18399538_18402791_18403283_18403417_18407015
ENSMUST00000207063.2	chr7	-	727	5	FSM	ENSMUSG00000035227.8	ENSMUST00000207063.2	727	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	927.677038359795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGCTGGATCATACG	NA	False	NA	-2	True	AATAAA	-21	NA	99512578	99488887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99512434
ENSMUST00000207077.2	chr8	+	3832	18	FSM	ENSMUSG00000044433.17	ENSMUST00000207077.2	3832	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	41.5373263579742	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCCTGTCTGGTCATGCT	6672	False	NA	-94	True	NA	NA	NA	3637811	3658928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652370_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
ENSMUST00000207082.2	chr7	-	1241	9	FSM	ENSMUSG00000001794.14	ENSMUST00000207082.2	1241	9	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_7	82.1492544092763	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGTTATTTTTTTAAT	NA	False	NA	-2	True	NA	NA	NA	29892397	29886360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291
ENSMUST00000207103.2	chr7	+	2414	2	FSM	ENSMUSG00000109511.2	ENSMUST00000207103.2	2414	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACTTGCTGTGAGT	370	False	NA	13	True	AATAAA	-13	NA	44465806	44480228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44465903_44477910
ENSMUST00000207106.2	chr7	+	1873	1	FSM	ENSMUSG00000039361.12	ENSMUST00000207106.2	1873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGAAGTAGGAAACG	NA	False	NA	NA	False	NA	NA	NA	89842306	89844179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_89842300_89844200
ENSMUST00000207159.2	chr7	-	466	4	FSM	ENSMUSG00000030615.13	ENSMUST00000207159.2	466	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	346.691345275432	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATCTTGTCTGCAAC	1772	False	NA	NA	False	AATAAA	-7	NA	90106310	90099919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_90100144_90100750_90100866_90104631_90104728_90106279
ENSMUST00000207161.2	chr7	+	1437	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACG	NA	False	NA	NA	False	NA	NA	NA	119339148	119341449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_119340294_119341157
ENSMUST00000207173.3	chr7	+	2950	5	FSM	ENSMUSG00000109398.3	ENSMUST00000207173.3	2950	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.6809513236909	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCATGGTGGTGCATG	3012	False	NA	NA	False	AATGAA	-40	NA	6346757	6358955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6346862_6349343_6349432_6351435_6351563_6352716_6352813_6356420
ENSMUST00000207178.2	chr7	-	912	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	6.37704215656966	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTACAGTCTGTCTTCT	NA	False	NA	-107	True	NA	NA	NA	108774414	108737881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
ENSMUST00000207193.2	chr7	+	3815	1	FSM	ENSMUSG00000074405.9	ENSMUST00000207193.2	3815	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGACTAGGCTGGTTT	NA	False	NA	-84	True	NA	NA	NA	5032322	5036137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5032300_5036100
ENSMUST00000207225.2	chr7	+	3489	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	27.4656350938971	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACGGTGTTCTGGTTTG	NA	False	NA	19	True	AATAAA	-20	NA	89779420	89858140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUST00000207233.2	chr7	-	2917	4	FSM	ENSMUSG00000048787.14	ENSMUST00000207233.2	2917	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	49.3716067751046	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTATACTCTTGATACAA	NA	False	NA	-7	True	AATAAA	-16	NA	119495348	119455028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_119457280_119458602_119459139_119494780_119494899_119495336
ENSMUST00000207249.2	chr11	-	3092	11	FSM	ENSMUSG00000040548.17	ENSMUST00000207249.2	3092	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	47.644097220957	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTTTATTTTAATC	NA	False	NA	-58	True	AATATA	-12	NA	106457936	106393218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404533_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790
ENSMUST00000207252.2	chr7	+	1944	4	FSM	ENSMUSG00000051451.7	ENSMUST00000207252.2	873	4	-1071	0	87	0	multi-exon	FALSE	canonical	3	27	junction_3	30.3424894606007	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGTGTCTTAAAATAGA	NA	False	NA	NA	False	AATAAA	-15	NA	90092023	90096929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_90093296_90093507_90093586_90094632_90094702_90096404
ENSMUST00000207263.2	chr7	-	835	7	FSM	ENSMUSG00000006315.10	ENSMUST00000207263.2	835	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	291.92945304569	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAGTGAAGTAAACAGT	9288	False	NA	-45	True	NA	NA	NA	30428934	30427158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428167_30428626_30428697_30428768
ENSMUST00000207282.2	chr7	+	3464	15	FSM	ENSMUSG00000030852.19	ENSMUST00000207282.2	3464	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	76.8787808096324	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	False	NA	29	True	AATAAA	-41	NA	130294494	130366514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUST00000207296.2	chr7	-	875	7	FSM	ENSMUSG00000006315.10	ENSMUST00000207296.2	875	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	290.731118618791	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTATGTCCATCTCT	9275	False	NA	-14	True	AGTAAA	-16	NA	30428947	30427127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30427329_30427411_30427555_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUST00000207303.2	chr7	-	2932	5	FSM	ENSMUSG00000038502.18	ENSMUST00000207303.2	2932	5	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_2	34.2855654758675	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	8454	False	NA	-9	True	AATAAA	-14	NA	44516198	44512491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514427_44514895
ENSMUST00000207317.2	chr8	+	802	4	FSM	ENSMUSG00000004565.16	ENSMUST00000207317.2	802	4	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	15.195028426722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGAGGGTGCCAGCC	3281	False	NA	NA	False	NA	NA	NA	3591074	3593136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3591593_3592297_3592415_3592844_3592942_3593066
ENSMUST00000207328.2	chr7	+	377	2	FSM	ENSMUSG00000011427.17	ENSMUST00000207328.2	377	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATTGTCTCAACAAT	NA	False	NA	NA	False	NA	NA	NA	29518415	29522573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29518624_29522404
ENSMUST00000207347.2	chr7	+	2030	5	FSM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	52	1801	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.71729831301464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTCTTCTAATACTCATT	3006	False	NA	NA	False	AATATA	-14	NA	6366330	6382907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517_6378614_6381207
ENSMUST00000207370.2	chr7	-	2147	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	0	0	0	0	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCTGTTTGCGTGGTT	NA	False	NA	NA	False	NA	NA	NA	44635916	44625412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUST00000207370.2-0	chr7	-	1236	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	136	775	0	0	multi-exon	FALSE	canonical	3	3261	junction_9	152.269092540837	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	False	NA	-36	True	AATAAA	-11	NA	44635780	44626187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUST00000207389.2	chr8	+	363	4	FSM	ENSMUSG00000087687.4	ENSMUST00000207389.2	363	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	322.072800603977	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTAGTGCCAAGTGTT	5638	False	NA	10	True	NA	NA	NA	3671601	3673372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3671696_3672341_3672429_3672592_3672626_3673223
ENSMUST00000207405.2	chr7	-	2592	8	FSM	ENSMUSG00000030708.15	ENSMUST00000207405.2	2592	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.8353193597147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTACTGTGCCATACACA	NA	False	NA	NA	False	NA	NA	NA	100164167	100150922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100156582_100156741_100159901_100160064_100160956_100161061_100163899
ENSMUST00000207419.2	chr7	+	675	1	FSM	ENSMUSG00000063179.14	ENSMUST00000207419.2	675	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGGTTA	NA	False	NA	NA	False	AAGAAA	-10	NA	130972884	130973559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_130972900_130973600
ENSMUST00000207442.2	chr7	+	3414	6	FSM	ENSMUSG00000066979.7	ENSMUST00000207442.2	3414	6	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_5	59.7146548177246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTTAAAAGTTGGGT	NA	False	NA	16	True	AATAAA	-11	NA	131162438	131172893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233
ENSMUST00000207500.2	chr7	-	271	1	FSM	ENSMUSG00000040564.15	ENSMUST00000207500.2	271	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGAGGCAACTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	19426416	19426145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19426100_19426400
ENSMUST00000207524.2	chr7	-	2162	17	FSM	ENSMUSG00000061028.8	ENSMUST00000207524.2	2162	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	61.5736347798309	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCCCAACCTGTGGT	NA	False	NA	NA	False	AATGAA	-1	NA	19338388	19318079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325030_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ENSMUST00000207525.2	chr7	-	897	1	FSM	ENSMUSG00000002985.17	ENSMUST00000207525.2	897	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGAGCAAGGTCGCCAGC	NA	False	NA	NA	False	NA	NA	NA	19431556	19430659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19430700_19431600
ENSMUST00000207534.3	chr7	-	741	4	FSM	ENSMUSG00000114515.3	ENSMUST00000207534.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	6.97614984548545	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGCTATGGATGGCAG	8434	False	NA	NA	False	NA	NA	NA	126408280	126399961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_126400167_126406855_126407012_126407267_126407409_126408041
ENSMUST00000207555.2	chr7	+	1641	7	FSM	ENSMUSG00000003184.16	ENSMUST00000207555.2	1641	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	17.7458915433028	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTCTAGGCTGGTGG	NA	False	NA	16	True	AATAAA	-31	NA	44647112	44651825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
ENSMUST00000207601.2	chr7	-	1029	7	FSM	ENSMUSG00000074227.13	ENSMUST00000207601.2	1304	7	257	18	255	0	multi-exon	FALSE	canonical	0	0	junction_2	472.77185007382	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	724	False	NA	-16	True	AATAAA	-21	NA	28981080	28955765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28956263_28957592_28957632_28957851_28958014_28958823_28958878_28959481_28959555_28959795_28959856_28980936
ENSMUST00000207628.2	chr7	-	576	3	FSM	ENSMUSG00000046792.9	ENSMUST00000207628.2	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	37	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAACTCGAAGTTCATGC	9600	False	NA	-10	True	AATAAA	-16	NA	6158996	6145284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_6145619_6146060_6146150_6158843
ENSMUST00000207654.2	chr7	-	1840	15	FSM	ENSMUSG00000002968.10	ENSMUST00000207654.2	1840	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	311.338461734335	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCCTCATCCCCTACGA	6960	False	NA	NA	False	NA	NA	NA	44541831	44530451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44538710_44538942_44541206_44541332_44541522_44541569_44541654
ENSMUST00000207695.2	chr7	-	2539	1	FSM	ENSMUSG00000062797.15	ENSMUST00000207695.2	2539	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTGCCTTATGGTTA	NA	False	NA	NA	False	AATAAA	-15	NA	89590371	89587832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89587800_89590400
ENSMUST00000207711.2	chr7	+	1320	7	FSM	ENSMUSG00000070837.7	ENSMUST00000207711.2	1320	7	0	0	0	0	multi-exon	FALSE	canonical	2	56	junction_6	160.229696234985	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6998834_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUST00000207736.2	chr7	+	2128	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGGTGTGTTACCTTGG	NA	False	NA	11	True	ATTAAA	-20	NA	131162108	131173624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUST00000207736.2-0	chr7	+	1397	9	FSM	ENSMUSG00000066979.7	ENSMUST00000207736.2	2128	9	0	731	0	0	multi-exon	FALSE	canonical	3	44	junction_4	579.695609781547	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTTAAAAGTTGGGT	NA	False	NA	16	True	AATAAA	-11	NA	131162108	131172893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUST00000207767.2	chr7	-	3172	17	FSM	ENSMUSG00000030397.12	ENSMUST00000207767.2	3172	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7444439871218	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGTACAGAGTCCGTCT	NA	False	NA	-3	True	NA	NA	NA	19185659	19159026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19160337_19161998_19162044_19163030_19163044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480
ENSMUST00000207774.2	chr7	-	1969	1	FSM	ENSMUSG00000109115.2	ENSMUST00000207774.2	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATATGGTACCTGAGT	7485	False	NA	NA	False	AATAAA	-23	NA	67331051	67329082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_67329100_67331100
ENSMUST00000207776.2	chr7	+	1735	1	FSM	ENSMUSG00000045752.14	ENSMUST00000207776.2	1735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAATTGTGTGGCTTTTT	NA	False	NA	16	True	AATAAA	-15	NA	142623089	142624824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_142623100_142624800
ENSMUST00000207799.2	chr7	+	1504	1	FSM	ENSMUSG00000040466.17	ENSMUST00000207799.2	1504	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	27147485	27148989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27147500_27149000
ENSMUST00000207805.2	chr7	+	454	3	FSM	ENSMUSG00000060508.17	ENSMUST00000207805.2	454	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTTTAAACTCAAACCAA	NA	False	NA	NA	False	TTTAAA	-24	NA	19725389	19753194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_19725614_19741948_19742019_19753034
ENSMUST00000207817.2	chr8	-	1804	5	FSM	ENSMUSG00000040459.12	ENSMUST00000207817.2	970	5	-210	-624	0	0	multi-exon	FALSE	canonical	3	8	junction_2	454.344789229501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5255	False	NA	-11	True	AATAAA	-35	NA	8740521	8716575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_8717417_8731383_8731468_8731840_8731949_8733747_8733974_8739976
ENSMUST00000207826.2	chr16	-	6261	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTGTTCAGTTTTATG	NA	False	NA	-3	True	AATAAA	-20	NA	64672015	64600709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ENSMUST00000207826.2-1	chr16	-	5218	9	FSM	ENSMUSG00000047141.6	ENSMUST00000207826.2	6261	9	-73	1116	-73	-1112	multi-exon	FALSE	canonical	3	157	junction_4	10.7812047100498	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTGGAAACTGGTTC	NA	False	NA	NA	False	AATAAA	-3	NA	64672088	64601825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_64603640_64604869_64607166_64608667_64608810_64611449_64611590_64612131_64612335_64614783_64614920_64634987_64635070_64650826_64650973_64671829
ENSMUST00000207849.2	chr7	-	2128	6	FSM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	741.154936568596	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATATCATTCTTTCTAAG	NA	False	NA	84	True	ATTAAA	-11	NA	99002321	98994601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002259
ENSMUST00000207858.2	chr7	-	4337	21	FSM	ENSMUSG00000036882.8	ENSMUST00000207858.2	4337	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	2.5588083163848	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTGGAGCTAGTGAATG	9032	False	NA	NA	False	AATAAA	-16	NA	30234485	30221650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30223272_30223368_30224014_30225379_30225455_30225538_30225685_30225771_30225926_30226566_30226713_30227704_30227813_30227894_30227978_30228078_30228224_30229140_30229244_30229319_30229473_30229560_30229621_30229700_30229768_30229849_30229928_30230010_30230134_30230948_30231042_30231503_30231642_30231744_30231826_30232184_30232270_30232359_30232458_30234350
ENSMUST00000207875.2	chr7	+	1128	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	-36	2985	0	0	multi-exon	TRUE	canonical	3	35	junction_2	3.48173074484398	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGAGCCTCCCCTCGTGCC	NA	False	NA	9	True	NA	NA	NA	100355890	100485404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ENSMUST00000207879.2	chr7	-	3096	22	FSM	ENSMUSG00000003435.10	ENSMUST00000207879.2	3096	22	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_13	72.5498030521275	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28028610	28014318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444
ENSMUST00000207895.2	chr7	+	1338	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	54.5688555863141	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATGGAGAAA	9918	False	NA	-5	True	NA	NA	NA	49408900	49423723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUST00000207907.2	chr7	-	2431	20	FSM	ENSMUSG00000061028.8	ENSMUST00000207907.2	2431	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_19	60.3945476433225	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCACATGCTGTCCCC	NA	False	NA	-9	True	AATAAA	-21	NA	19338330	19314967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338249
ENSMUST00000207916.2	chr7	-	2372	3	FSM	ENSMUSG00000032860.6	ENSMUST00000207916.2	2372	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAACAACTGGTTCT	3064	False	NA	NA	False	AATACA	-27	NA	100661244	100646234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100648308_100652770_100652962_100661136
ENSMUST00000207926.2	chr7	+	2412	8	FSM	ENSMUSG00000030435.17	ENSMUST00000207926.2	2412	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	582.724985017174	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	1833	False	NA	28	True	ATTAAA	-18	NA	5071028	5082932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5071183_5071731_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ENSMUST00000207957.2	chr7	-	880	2	FSM	ENSMUSG00000046792.9	ENSMUST00000207957.2	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCCACCTGTACACTG	9671	False	NA	-77	True	NA	NA	NA	6158925	6145351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_6146150_6158843
ENSMUST00000207980.2	chr7	-	767	5	FSM	ENSMUSG00000030619.11	ENSMUST00000207980.2	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_2	814.365090116221	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAACTCTAGAAAGCT	NA	False	NA	-8	True	AATAAA	-27	NA	89614049	89603867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936
ENSMUST00000207983.2	chr7	-	1634	9	FSM	ENSMUSG00000025813.15	ENSMUST00000207983.2	1634	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	5.73230974389905	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTTTT	NA	False	NA	NA	False	NA	NA	NA	81356557	81259477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81260190_81261053_81261135_81262008_81262120_81264090_81264248_81268323_81268464_81273999_81274093_81286108_81286241_81299301_81299459_81356506
ENSMUST00000207988.2	chr7	-	2421	1	FSM	ENSMUSG00000109086.2	ENSMUST00000207988.2	2421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAACTTCAACAAATGA	NA	False	NA	NA	False	AAGAAA	-29	NA	57530974	57528553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_57528600_57531000
ENSMUST00000208002.2	chr8	+	4444	35	FSM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	71.0843412012367	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3565424	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUST00000208043.2	chr17	-	2987	11	FSM	ENSMUSG00000025728.17	ENSMUST00000208043.2	2987	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	84.5955081549842	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26161797	26145400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26161743
ENSMUST00000208044.2	chr7	-	1438	7	FSM	ENSMUSG00000030739.19	ENSMUST00000208044.2	1438	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	22.8837642591132	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGGCTGCGTTTCTAA	NA	False	NA	-3	True	AATAAA	-15	NA	44263549	44255228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263374
ENSMUST00000208049.2	chr7	+	1401	7	FSM	ENSMUSG00000070837.7	ENSMUST00000208049.2	1401	7	0	0	0	0	multi-exon	FALSE	canonical	2	56	junction_6	128.262751152988	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2711	False	NA	20	True	ATTAAA	-21	NA	6998298	7006090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
ENSMUST00000208056.2	chr11	-	3111	12	FSM	ENSMUSG00000020805.15	ENSMUST00000208056.2	3111	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	16.0103272456373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGGAAAGTTCCAGTGT	NA	False	NA	-101	True	NA	NA	NA	72157419	72132915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72134463_72135951_72136090_72138492_72138655_72141551_72141671_72143083_72143185_72144009_72144229_72148185_72148309_72149783_72149953_72151020_72151158_72152438_72152576_72152848_72152978_72157289
ENSMUST00000208068.2	chr7	-	2151	21	FSM	ENSMUSG00000061028.8	ENSMUST00000208068.2	2151	21	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	53.6276747584678	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCACATGCTGTCCCC	NA	False	NA	-9	True	AATAAA	-21	NA	19338386	19314967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ENSMUST00000208084.2	chr7	+	5294	1	FSM	ENSMUSG00000063179.14	ENSMUST00000208084.2	5294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	130990917	130996211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_130990900_130996200
ENSMUST00000208119.2	chr7	-	2173	6	FSM	ENSMUSG00000070436.13	ENSMUST00000208119.2	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	754.843400977978	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCTTTCTAAGACAAA	NA	False	NA	89	True	ATTAAA	-16	NA	99002321	98994596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088_99002173_99002259
ENSMUST00000208185.2	chr8	+	376	1	FSM	ENSMUSG00000087687.4	ENSMUST00000208185.2	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	5587	False	NA	NA	False	AATATA	-6	NA	3671550	3671926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3671600_3671900
ENSMUST00000208190.2	chr7	-	2259	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_1	167.71624785905	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGATTGGTTTTTTTGTT	NA	False	NA	-5	True	ATTAAA	-16	NA	143102843	143067319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUST00000208196.2	chr7	-	703	6	FSM	ENSMUSG00000030619.11	ENSMUST00000208196.2	703	6	0	0	0	0	multi-exon	FALSE	canonical	3	2210	junction_4	209.718287233136	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTTCAATCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	89621506	89613801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438
ENSMUST00000208199.2	chr7	-	4391	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAGACTCTTCATTTT	6636	False	NA	-8	True	NA	NA	NA	28135616	28098946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ENSMUST00000208199.2-0	chr7	-	3744	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	-93	740	-57	-713	multi-exon	FALSE	canonical	3	219	junction_1	85.244582753914	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGCCTTCCC	6543	False	NA	NA	False	NA	NA	NA	28135709	28099686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ENSMUST00000208202.2	chr7	+	936	4	FSM	ENSMUSG00000030922.13	ENSMUST00000208202.2	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	24.5356882927706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTATAGGCTTTTTTG	NA	False	NA	-74	True	NA	NA	NA	119495092	119515893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_119495114_119508893_119509186_119513395_119513489_119515363
ENSMUST00000208212.2	chr7	-	2002	2	FSM	ENSMUSG00000109540.2	ENSMUST00000208212.2	2002	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATATGCCATGGCTAAAT	NA	False	NA	NA	False	NA	NA	NA	5766416	5762106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_5763630_5765937
ENSMUST00000208217.2	chr7	-	1178	9	FSM	ENSMUSG00000048065.9	ENSMUST00000208217.2	1178	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	13.026415470113	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACAATGTGTGGATAT	NA	False	NA	-5	True	AATAAA	-19	NA	107357203	107349171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_107349604_107350373_107350474_107351537_107351624_107352422_107352507_107353052_107353183_107353910_107354018_107356117_107356191_107356391_107356519_107357164
ENSMUST00000208222.2	chr9	+	2159	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	0	6966	0	318	multi-exon	FALSE	canonical	3	39	junction_6	6.49976257875985	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCGCTCAAGCAGTTGT	NA	False	NA	NA	False	NA	NA	NA	14187596	14237431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
ENSMUST00000208252.2	chr8	-	3559	3	FSM	ENSMUSG00000040459.12	ENSMUST00000208252.2	3559	3	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_2	32	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5672	False	NA	-11	True	AATAAA	-35	NA	8740104	8716575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_8717417_8731383_8733974_8739976
ENSMUST00000208253.2	chr7	-	3693	18	FSM	ENSMUSG00000002968.10	ENSMUST00000208253.2	3693	18	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	207.582576223432	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCGTGGGCTTTCC	6976	False	NA	-4	True	NA	NA	NA	44541815	44526188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ENSMUST00000208255.2	chr7	-	1720	1	FSM	ENSMUSG00000041328.17	ENSMUST00000208255.2	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	92319111	92317391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92317400_92319100
ENSMUST00000208259.2	chr7	+	815	3	FSM	ENSMUSG00000046865.8	ENSMUST00000208259.2	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	2495	junction_1	88.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGTTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	27874418	27877126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_27874504_27875279_27875451_27876567
ENSMUST00000208278.2	chr7	+	1607	6	FSM	ENSMUSG00000037706.18	ENSMUST00000208278.2	1607	6	0	0	0	0	multi-exon	FALSE	canonical	3	5787	junction_2	310.280518241155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGCATGCTAATGGGAC	NA	False	NA	24	True	AATAAA	-12	NA	142618410	142621653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUST00000208356.2	chr7	-	3464	7	FSM	ENSMUSG00000030641.11	ENSMUST00000208356.2	840	7	0	-2624	0	0	multi-exon	FALSE	canonical	3	86	junction_4	58.4648517392193	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTTTTGTTATAATTT	NA	False	NA	-1	True	AGTAAA	-18	NA	92523445	92506732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_92509521_92510607_92510726_92511532_92511695_92515778_92515908_92517319_92517407_92521969_92522053_92523348
ENSMUST00000208357.2	chr7	-	806	4	FSM	ENSMUSG00000062797.15	ENSMUST00000208357.2	806	4	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_3	356.664485974642	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTTGAAATACCATTAC	NA	False	NA	-2	True	AATAAA	-17	NA	89590407	89567911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89590176
ENSMUST00000208360.2	chr7	+	3058	9	FSM	ENSMUSG00000034690.14	ENSMUST00000208360.2	3058	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	4.89738450603993	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTTCTGCTGCAAGAA	NA	False	NA	NA	False	AAAACA	-5	NA	6063505	6107631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6063871_6068377_6069951_6075560_6075720_6076110_6076276_6087542_6087711_6095465_6095637_6101828_6102000_6103751_6103923_6107516
ENSMUST00000208369.2	chr11	-	2177	6	FSM	ENSMUSG00000040481.18	ENSMUST00000208369.2	2177	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	22.5619148123558	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGACGCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	106938169	106926222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_106927417_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825
ENSMUST00000208441.2	chr7	+	485	4	FSM	ENSMUSG00000074218.4	ENSMUST00000208441.2	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	502.814964861716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTGTCTACGCAGTGGA	5724	False	NA	72	True	NA	NA	NA	29883618	29885503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29883765_29884509_29884597_29884699_29884785_29885336
ENSMUST00000208454.2	chr7	+	813	2	FSM	ENSMUSG00000046096.8	ENSMUST00000208454.2	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAAGGCAGTCATTTGC	NA	False	NA	21	True	AATAAA	-27	NA	120276842	120325904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_120277094_120325342
ENSMUST00000208476.2	chr11	-	2853	4	FSM	ENSMUSG00000109408.2	ENSMUST00000208476.2	2853	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTTATTTTTCTGTGT	9076	False	NA	NA	False	TTTAAA	-5	NA	119382015	119352026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_119354496_119355918_119356057_119379727_119379827_119381868
ENSMUST00000208477.2	chr7	-	1553	6	FSM	ENSMUSG00000035227.8	ENSMUST00000208477.2	1553	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_5	975.780180163545	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGAGTCTTGAAAGAAGG	NA	False	NA	-2	True	AATAAA	-19	NA	99508066	99488109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99498363_99498460_99507970
ENSMUST00000208490.2	chr7	+	3428	1	FSM	ENSMUSG00000109105.2	ENSMUST00000208490.2	3428	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGGTCGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	29626402	29629830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29626400_29629800
ENSMUST00000208513.2	chr7	-	227	1	FSM	ENSMUSG00000109205.2	ENSMUST00000208513.2	227	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAAGCATAGAGGGAACA	NA	False	NA	NA	False	NA	NA	NA	29464088	29463861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_29463900_29464100
ENSMUST00000208519.2	chr7	-	899	5	FSM	ENSMUSG00000030629.16	ENSMUST00000208519.2	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	273.853405127634	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATATAACCTGAGAAAAC	NA	False	NA	NA	False	TATAAA	-36	NA	84328574	84269659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ENSMUST00000208551.2	chr7	-	2678	17	FSM	ENSMUSG00000002968.10	ENSMUST00000208551.2	2678	17	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_8	64.3087948398195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	7001	False	NA	-13	True	AATAAA	-10	NA	44541790	44528814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ENSMUST00000208605.2	chr7	+	2275	3	FSM	ENSMUSG00000055407.15	ENSMUST00000208605.2	2275	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	18	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTCTCTGGCTCTGTG	NA	False	NA	13	True	AATAAA	-19	NA	98917612	98986344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_98918521_98964895_98965110_98985191
ENSMUST00000208626.2	chr7	+	2708	2	FSM	ENSMUSG00000109511.2	ENSMUST00000208626.2	2708	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGCTGTGAGTATGGG	75	False	NA	18	True	AATAAA	-18	NA	44465511	44480233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44465897_44477910
ENSMUST00000208627.2	chr7	+	4184	4	FSM	ENSMUSG00000046096.8	ENSMUST00000208627.2	345	4	-62	-3777	0	0	multi-exon	FALSE	canonical	3	73	junction_1	54.0514158515349	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120276840	120333494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_120276936_120277012_120277094_120325342_120325556_120329699
ENSMUST00000208634.2	chr7	+	2127	10	FSM	ENSMUSG00000035203.17	ENSMUST00000208634.2	2127	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	25.486864203224	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGTGGCTCCCTTAAAT	2819	False	NA	19	True	AATAAA	-13	NA	5086753	5101175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ENSMUST00000208639.2	chr7	-	1730	1	FSM	ENSMUSG00000030615.13	ENSMUST00000208639.2	1730	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAATTAAACAACTTCC	1689	False	NA	NA	False	CATAAA	-43	NA	90106393	90104663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_90104700_90106400
ENSMUST00000208658.2	chr7	+	2891	1	FSM	ENSMUSG00000073856.12	ENSMUST00000208658.2	2891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTAGTGGTTTGTGATGTT	NA	False	NA	NA	False	NA	NA	NA	118454974	118457865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_118455000_118457900
ENSMUST00000208694.2	chr9	+	3988	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	38.1313519298752	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533423	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ENSMUST00000208711.2	chr7	+	1962	7	FSM	ENSMUSG00000030498.16	ENSMUST00000208711.2	1962	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	5.09084144976709	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTTCCCAGCAATATG	NA	False	NA	63	True	AATAAA	-17	NA	51537665	51644263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ENSMUST00000208737.2	chr11	+	1843	14	FSM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_6	299.627579489159	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGGCTCCTTTCCTTT	1404	False	NA	1	True	ATTAAA	-18	NA	120675110	120679927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUST00000208742.2	chr7	+	3361	20	FSM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	48.3518384036048	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTACGGTGTTCTGGTT	NA	False	NA	17	True	AATAAA	-18	NA	89779711	89858138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUST00000208744.2	chr12	-	928	6	FSM	ENSMUSG00000069755.6	ENSMUST00000208744.2	928	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.49666295470958	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTTATGAATGTCATC	NA	False	NA	NA	False	NA	NA	NA	20971263	20950743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_20950936_20952270_20952332_20952533_20952661_20964759_20964843_20965748_20965793_20970842
ENSMUST00000208781.2	chr7	+	2801	5	FSM	ENSMUSG00000109176.2	ENSMUST00000208781.2	2801	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.3111795119741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATAGTGGAGCTG	3154	False	NA	30	True	AATAAA	-41	NA	6980244	6994086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_6980472_6984231_6984357_6987998_6988143_6989101_6989202_6991881
ENSMUST00000208846.2	chr7	-	3107	13	FSM	ENSMUSG00000002981.11	ENSMUST00000208846.2	3107	13	0	0	0	0	multi-exon	FALSE	canonical	3	1363	junction_4	142.270477924582	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAACCACCGCACCTC	5160	False	NA	-17	True	AATAAA	-21	NA	19398946	19367173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19367888_19367980_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ENSMUST00000208856.2	chr8	-	2365	12	FSM	ENSMUSG00000022322.9	ENSMUST00000208856.2	2365	12	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_8	40.3396734765956	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGAAAAGACTGAGTG	NA	False	NA	NA	False	TATAAA	-34	NA	4829551	4786229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ENSMUST00000208867.2	chr7	-	1658	8	FSM	ENSMUSG00000048677.10	ENSMUST00000208867.2	1658	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	3.36852174930046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACCTCTTTCTACTTC	NA	False	NA	1	True	TATAAA	-18	NA	144812792	144807794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251
ENSMUST00000208873.2	chr7	+	2064	2	FSM	ENSMUSG00000046096.8	ENSMUST00000208873.2	2064	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTTAATA	NA	False	NA	NA	False	AATAAA	-24	NA	120325398	120333494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_120325556_120331587
ENSMUST00000208896.2	chr11	-	764	6	FSM	ENSMUSG00000038807.20	ENSMUST00000208896.2	764	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	5.05964425626941	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTAGGGACCCTTGC	NA	False	NA	NA	False	NA	NA	NA	74413577	74327749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_74327963_74328256_74328290_74329089_74329135_74332575_74332612_74375712_74375798_74413225
ENSMUST00000208944.2	chr7	-	2306	3	FSM	ENSMUSG00000061374.15	ENSMUST00000208944.2	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	122.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGACCTGGTGGAG	4272	False	NA	NA	False	NA	NA	NA	5016237	5010273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_5012205_5015676_5016022_5016207
ENSMUST00000208951.2	chr7	+	1883	8	FSM	ENSMUSG00000066232.5	ENSMUST00000208951.2	1883	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	376.224422820383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7239	False	NA	21	True	ATTAAA	-16	NA	109617521	109655322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109617716_109626277_109626356_109642035_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
ENSMUST00000209010.2	chr8	-	2317	6	FSM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	599.918127747445	2158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4362619	4338342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556
ENSMUST00000209028.2	chr7	+	5117	3	FSM	ENSMUSG00000066647.9	ENSMUST00000209028.2	5117	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCACGCGTGTG	9189	False	NA	NA	False	NA	NA	NA	29869299	29881749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_29869640_29875275_29875372_29877068
ENSMUST00000209032.2	chr7	-	1610	6	FSM	ENSMUSG00000035227.8	ENSMUST00000209032.2	1610	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	1023.35436677624	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGAGTCTTGAAAGAAG	NA	False	NA	-3	True	AATAAA	-18	NA	99508118	99488110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99505619_99505722_99507970
ENSMUST00000209039.2	chr7	+	1453	10	FSM	ENSMUSG00000011658.17	ENSMUST00000209039.2	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	26.1448954015034	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTCCCAGGCGCCCCCA	NA	False	NA	6	True	AATAAA	-17	NA	44545529	44550028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ENSMUST00000209041.2	chr7	-	4516	21	FSM	ENSMUSG00000032875.9	ENSMUST00000209041.2	4516	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	5.07346035758633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATGGCTCCCCCGGGC	6852	False	NA	-13	True	AATAAA	-11	NA	100543897	100521341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100543649
ENSMUST00000209065.2	chr7	-	727	6	FSM	ENSMUSG00000006315.10	ENSMUST00000209065.2	727	6	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_1	3.48711915483254	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATGTCCATCTCTCT	-11	True	NA	-12	True	AGTAAA	-18	NA	30428746	30427125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626
ENSMUST00000209098.2	chr7	-	2281	15	FSM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	301.333092528951	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGAGATTGGTTTTT	NA	False	NA	-10	True	ATTAAA	-11	NA	143102565	143067324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102473
ENSMUST00000209099.2	chr7	+	2088	12	FSM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	525.567461915969	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGGATCCTCATCTGT	35	False	NA	28	True	ATTAAA	-18	NA	5065243	5082932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ENSMUST00000209117.2	chr7	-	1593	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	74	1288	0	0	multi-exon	FALSE	canonical	3	577	junction_5	69.5045961709648	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339091	84264261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ENSMUST00000209124.2	chr7	-	741	7	FSM	ENSMUSG00000109324.3	ENSMUST00000209124.2	741	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1322.1734211349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCCAGGCTGGCCCT	NA	False	NA	NA	False	NA	NA	NA	44635743	44626323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44635706
ENSMUST00000209140.2	chr7	-	1235	2	FSM	ENSMUSG00000030629.16	ENSMUST00000209140.2	1235	2	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGTGCAGAGGGCTTTT	7653	False	NA	NA	False	NA	NA	NA	84267906	84264790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_84265177_84267057
ENSMUST00000209141.2	chr7	-	3755	29	FSM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_13	69.0304945924152	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038131	28014322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776
ENSMUST00000209166.2	chr7	-	271	2	FSM	ENSMUSG00000097162.3	ENSMUST00000209166.2	271	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCAAACCGCTATCTAA	NA	False	NA	-13	True	AATAAA	-17	NA	89779148	89774038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89774241_89779079
ENSMUST00000209175.2	chr7	-	744	2	FSM	ENSMUSG00000030942.9	ENSMUST00000209175.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAGTAACTCAAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	119319987	119318034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_119318525_119319733
ENSMUST00000209190.2	chr7	-	1792	4	FSM	ENSMUSG00000051403.10	ENSMUST00000209190.2	1792	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	23.3666428910958	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	5826	False	NA	-6	True	AATAAA	-15	NA	19266907	19264724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571
ENSMUST00000209200.2	chr8	+	1519	8	FSM	ENSMUSG00000091490.4	ENSMUST00000209200.2	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	49.9477277781891	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGCCATTAGACTTAA	NA	False	NA	4	True	AATATA	-5	NA	43633577	43646901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUST00000209206.2	chr8	+	4032	15	FSM	ENSMUSG00000036712.16	ENSMUST00000209206.2	4032	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	15.8765968182924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGAGTCTATAAATAT	1701	False	NA	2	True	TATAAA	-11	NA	89428933	89475077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUST00000209210.2	chr8	-	936	3	FSM	ENSMUSG00000110231.2	ENSMUST00000209210.2	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACACAGAACTGACTCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	45618256	45613530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_45614092_45614492_45614559_45617947
ENSMUST00000209212.2	chr7	-	514	7	FSM	ENSMUSG00000074129.15	ENSMUST00000209212.2	514	7	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_3	5972.4797311409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATAAAGACTGTTTGC	NA	False	NA	5	True	NA	NA	NA	44778126	44775369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000209218.2	chr8	-	1375	10	FSM	ENSMUSG00000056228.11	ENSMUST00000209218.2	1375	10	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	59.3585048562161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGAAGACATGGGATGCA	NA	False	NA	NA	False	NA	NA	NA	11600744	11571852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11572219_11576001_11576070_11579579_11579714_11580294_11580425_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ENSMUST00000209245.2	chr7	-	1512	12	FSM	ENSMUSG00000003269.18	ENSMUST00000209245.2	1512	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	132.007888569692	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATTTGTAATTAACATG	3171	False	NA	NA	False	NA	NA	NA	45463726	45457062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459546_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ENSMUST00000209281.2	chr8	-	686	3	FSM	ENSMUSG00000039720.8	ENSMUST00000209281.2	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTCATTGCTATGTTC	NA	False	NA	-12	True	AATAAA	-12	NA	27688745	27687491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27687710_27687955_27688099_27688420
ENSMUST00000209287.2	chr7	+	1027	6	FSM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	3241.25016621673	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCCTCTGTGTTCAT	6008	False	NA	9	True	AATAAA	-16	NA	45367580	45370252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45368005_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUST00000209294.2	chr7	-	1612	10	FSM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	39.3474550920669	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	False	NA	-32	True	AATAAA	-15	NA	140680455	140671089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ENSMUST00000209299.2	chr8	-	397	2	FSM	ENSMUSG00000039720.8	ENSMUST00000209299.2	397	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGTTGTTCCTGGCCTAC	NA	False	NA	NA	False	ACTAAA	-27	NA	27713856	27692423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27692680_27713715
ENSMUST00000209350.2	chr7	+	2466	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6.94422221866655	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCTGGAGTAGTGTGG	5652	False	NA	3	True	AATAAA	-10	NA	45546524	45566833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ENSMUST00000209356.2	chr8	-	1744	4	FSM	ENSMUSG00000051176.7	ENSMUST00000209356.2	1744	4	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_3	1933.09774426667	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43759987	43748099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_43749574_43753664_43753743_43757512_43757595_43759877
ENSMUST00000209364.3-1	chr2	-	5133	26	FSM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	34	-1394	0	1394	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081262	53026855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ENSMUST00000209396.2	chr8	+	2421	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	290.39449030586	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	2120	False	NA	88	True	AATAAA	-18	NA	13388767	13428442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUST00000209414.2	chr8	-	3592	1	FSM	ENSMUSG00000110317.2	ENSMUST00000209414.2	3592	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGCCTCATCTCAGT	NA	False	NA	NA	False	AATAAA	-28	NA	26645507	26641915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26641900_26645500
ENSMUST00000209465.2	chr8	-	997	6	FSM	ENSMUSG00000038515.11	ENSMUST00000209465.2	997	6	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	24.7111310951158	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAATTAGTGTTCTCC	NA	False	NA	-32	True	TTTAAA	-7	NA	13242255	13226932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049
ENSMUST00000209466.2	chr7	-	748	5	FSM	ENSMUSG00000030792.9	ENSMUST00000209466.2	748	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	20.9090291501064	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTACATCCTCAGGCCA	8601	False	NA	-104	True	NA	NA	NA	44861247	44857048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44857323_44859536_44859627_44859754_44859896_44860824_44860995_44861174
ENSMUST00000209469.2	chr19	+	2354	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	0	0	0	0	multi-exon	FALSE	canonical	3	6173	junction_3	71.2850303749361	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	5540482	5545229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ENSMUST00000209479.2	chr8	-	4936	9	FSM	ENSMUSG00000036902.12	ENSMUST00000209479.2	4936	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.7649262788001	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATTACTGTGAATTC	NA	False	NA	NA	False	NA	NA	NA	86427383	86363865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_86367746_86369041_86369156_86374344_86374574_86389807_86389936_86390036_86390061_86396162_86396412_86397018_86397160_86400702_86400760_86427269
ENSMUST00000209484.2	chr7	-	1783	6	FSM	ENSMUSG00000053801.19	ENSMUST00000209484.2	1783	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	183.663387750526	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAAGTCCTCTGAGCTT	8628	False	NA	-7	True	AATAAA	-28	NA	45480219	45474653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45480018
ENSMUST00000209493.2	chr8	-	1885	1	FSM	ENSMUSG00000074171.3	ENSMUST00000209493.2	1885	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGTTTTTCTATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	91635044	91633159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_91633200_91635000
ENSMUST00000209500.2	chr7	+	1560	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	22.576259654779	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCAGTGTGTCCTGAG	NA	False	NA	17	True	AATAAA	-14	NA	140795806	140798568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
ENSMUST00000209536.2	chr7	+	699	3	FSM	ENSMUSG00000019158.10	ENSMUST00000209536.2	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	359.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCTGAGTGATAGCTC	NA	False	NA	20	True	ATTAAA	-21	NA	16186887	16189419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_16187096_16187981_16188139_16189085
ENSMUST00000209559.2	chr8	+	4476	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	10.7172466146861	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTATAAATATTGCTGT	NA	False	NA	8	True	TATAAA	-17	NA	89423702	89475083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUST00000209565.2	chr8	+	1971	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11608428	11613250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11608567_11611417
ENSMUST00000209567.2	chr8	-	2615	3	FSM	ENSMUSG00000055707.14	ENSMUST00000209567.2	2615	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	23	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGGCCTGTGTCAGC	NA	False	NA	NA	False	NA	NA	NA	70928548	70903329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70905670_70908115_70908299_70928456
ENSMUST00000209570.2	chr8	-	377	1	FSM	ENSMUSG00000110057.2	ENSMUST00000209570.2	377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTTCAATCAGCTGTAC	NA	False	NA	NA	False	NA	NA	NA	79213039	79212662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79212700_79213000
ENSMUST00000209614.2	chr10	+	1647	2	FSM	ENSMUSG00000061371.8	ENSMUST00000209614.2	1647	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	81896092	81900579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81897183_81900022
ENSMUST00000209626.2	chr7	-	734	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209626.2	734	8	0	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_7	5527.98350879137	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAAATCTGCAAGTT	NA	False	NA	-52	True	NA	NA	NA	44778159	44775426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44777965
ENSMUST00000209657.2	chr8	-	785	1	FSM	ENSMUSG00000109933.2	ENSMUST00000209657.2	785	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGATTTTTAATAGTG	NA	False	NA	NA	False	NA	NA	NA	11734243	11733458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11733500_11734200
ENSMUST00000209699.2	chr8	-	872	6	FSM	ENSMUSG00000039720.8	ENSMUST00000209699.2	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	21.3354165649513	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAATGTTTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	27692561	27689232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399
ENSMUST00000209707.2	chr8	+	3816	8	FSM	ENSMUSG00000013878.19	ENSMUST00000209707.2	1000	8	88	-2904	0	0	multi-exon	FALSE	canonical	3	12	junction_1	23.7469654344916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAATGTGTTATGTTT	NA	False	NA	7	True	AATAAA	-17	NA	26609503	26633899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_26609629_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ENSMUST00000209720.2	chr1	-	6905	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGCTCAATTGATGAA	NA	False	NA	3	True	AATAAA	-17	NA	175520196	175509802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_175516247_175519735
ENSMUST00000209733.2	chr8	+	921	2	FSM	ENSMUSG00000031697.13	ENSMUST00000209733.2	921	2	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTCTTCATCCATCAAA	NA	False	NA	NA	False	NA	NA	NA	86026455	86028492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_86026622_86027737
ENSMUST00000209735.2	chr8	-	6487	53	FSM	ENSMUSG00000031502.12	ENSMUST00000209735.2	6487	53	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.0377606564984	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTAGATCATTTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	11362689	11248430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11254535_11254553_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ENSMUST00000209765.2	chr2	+	1898	1	FSM	ENSMUSG00000109946.2	ENSMUST00000209765.2	1898	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTTCTCATTTTTCTT	NA	False	NA	3	True	AATAAA	-15	NA	27332335	27334233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_27332300_27334200
ENSMUST00000209779.2	chr7	-	2541	6	FSM	ENSMUSG00000030798.16	ENSMUST00000209779.2	2541	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	4.63033476111609	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTGGT	4444	False	NA	-18	True	AATAAA	-20	NA	44888239	44883060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ENSMUST00000209787.2	chr8	-	1833	14	FSM	ENSMUSG00000038225.16	ENSMUST00000209787.2	1833	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	19.6766764885012	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTAAATTAGTGCCGG	NA	False	NA	NA	False	NA	NA	NA	47070243	47031897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ENSMUST00000209812.2	chr7	-	690	8	FSM	ENSMUSG00000074129.15	ENSMUST00000209812.2	690	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	5944.08936744421	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTCCTTAGGCACTGC	NA	False	NA	45	True	NA	NA	NA	44778147	44775295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776512_44776632_44776699_44776919_44776993_44778123
ENSMUST00000209838.2	chr7	-	449	4	FSM	ENSMUSG00000003429.12	ENSMUST00000209838.2	449	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12140.870543563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGTACAGAACAGGCTTG	NA	False	NA	-15	True	AATAAA	-10	NA	44772952	44771816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44771983_44772252_44772383_44772619_44772663_44772842
ENSMUST00000209851.2	chr8	+	2164	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	1	968	0	-968	multi-exon	FALSE	canonical	3	124	junction_5	19.2476549798208	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATCTCTTCTATT	NA	False	NA	3	True	ATTAAA	-14	NA	31640343	31650114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
ENSMUST00000209859.2	chr18	-	4350	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	16	-2940	0	1342	multi-exon	TRUE	canonical	3	13	junction_4	4.03871569806491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTTTTTTAAGAC	NA	False	NA	NA	False	TATAAA	-14	NA	12254571	12113192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ENSMUST00000209865.2	chr5	-	3457	3	FSM	ENSMUSG00000109771.2	ENSMUST00000209865.2	3457	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAAGTGTTCCTTTTTC	2135	False	NA	-3	True	AATAAA	-14	NA	110228754	110224001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110227247_110228349_110228411_110228603
ENSMUST00000209872.2	chr8	+	1395	7	FSM	ENSMUSG00000091490.4	ENSMUST00000209872.2	1395	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	183.817542386163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633577	43646918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43643105_43643129_43643305_43643407_43646239
ENSMUST00000209885.2	chr8	+	2511	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	150.974903502547	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2103	False	NA	94	True	AATAAA	-24	NA	13388750	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUST00000209889.2	chr7	-	771	2	FSM	ENSMUSG00000007833.16	ENSMUST00000209889.2	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACCTGTAAGTTCAG	9340	False	NA	NA	False	NA	NA	NA	44803990	44798594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44799191_44803815
ENSMUST00000209901.2	chr7	+	549	4	FSM	ENSMUSG00000003421.14	ENSMUST00000209901.2	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	81.6265207447242	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACCTCCTGCGGGCCAG	3118	False	NA	NA	False	NA	NA	NA	44711912	44724354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029
ENSMUST00000209913.2	chr8	+	2035	11	FSM	ENSMUSG00000038365.9	ENSMUST00000209913.2	2035	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	44.5353791945235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTTTCTGCAACAA	NA	False	NA	13	True	AATAAA	-19	NA	13957802	13990521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981184_13981365_13985145_13985290_13988921_13988949_13989562
ENSMUST00000209927.2	chr7	-	552	7	FSM	ENSMUSG00000074129.15	ENSMUST00000209927.2	552	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	6353.08417883262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCATGCCTGCCTGGCCT	NA	False	NA	-11	True	AATAAA	-9	NA	44778126	44775351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776919_44776993_44778123
ENSMUST00000209951.2	chr13	+	1597	4	FSM	ENSMUSG00000110393.3	ENSMUST00000209951.2	1597	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.55902608401044	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGTTCTTGTCTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	65389566	65397935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_65389830_65395454_65395582_65395782_65395844_65396789
ENSMUST00000209963.2	chr7	-	2607	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	0	930	0	0	multi-exon	TRUE	canonical	3	349	junction_15	41.3256881370413	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9333	False	NA	-8	True	AATAAA	-20	NA	44803997	44791258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ENSMUST00000209986.2	chr8	+	3652	8	FSM	ENSMUSG00000031577.11	ENSMUST00000209986.2	3652	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	52.8432414152019	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGCAACAGCACTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	31640367	31653367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909_31650078_31651818
ENSMUST00000210005.2	chr8	+	1914	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210005.2	1914	10	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	42.074302294634	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTGTGTGCTTTTTC	NA	False	NA	20	True	AATAAA	-16	NA	71047130	71049940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUST00000210032.2	chr9	-	3775	7	FSM	ENSMUSG00000049556.6	ENSMUST00000210032.2	3627	7	-778	630	-448	0	multi-exon	FALSE	canonical	0	0	junction_2	1.34370962471642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTAGTCGGAATGCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	56704200	56526388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_56528600_56560883_56561117_56581706_56581794_56592403_56592566_56631584_56631630_56682822_56682933_56703273
ENSMUST00000210040.2	chr8	+	2688	12	FSM	ENSMUSG00000037134.18	ENSMUST00000210040.2	2688	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	44.8630606944737	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGTGTATGTAACATTA	NA	False	NA	12	True	AATAAA	-17	NA	78276082	78307966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289077_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ENSMUST00000210046.2	chr7	-	370	1	FSM	ENSMUSG00000109929.2	ENSMUST00000210046.2	370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGAGATTCTTCAGTTGTG	NA	False	NA	NA	False	NA	NA	NA	13099001	13098631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_13098600_13099000
ENSMUST00000210052.2	chr5	-	3523	4	FSM	ENSMUSG00000109771.2	ENSMUST00000210052.2	3523	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	10.7082522694727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAAGTGTTCCTTTTTC	NA	False	NA	-3	True	AATAAA	-14	NA	110242286	110224001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110227247_110228349_110228411_110228603_110228731_110242196
ENSMUST00000210060.2	chr7	-	2577	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	47.003829631212	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGACATCCCTTTCAGTT	3262	False	NA	-6	True	AATAAA	-35	NA	45367326	45359690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
ENSMUST00000210062.2	chr7	-	2121	13	FSM	ENSMUSG00000058886.10	ENSMUST00000210062.2	2121	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	44.9793162341191	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGAATGTTGTCAAGC	NA	False	NA	-7	True	AATAAA	-24	NA	140907406	140877097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140894990_140895161_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
ENSMUST00000210063.2	chr8	+	2723	5	FSM	ENSMUSG00000038497.8	ENSMUST00000210063.2	2723	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	9.44391338376205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13338189	13347617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979
ENSMUST00000210077.2	chr7	+	1778	1	FSM	ENSMUSG00000030965.20	ENSMUST00000210077.2	1778	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132460963	132462741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_132461000_132462700
ENSMUST00000210096.2	chr8	-	517	5	FSM	ENSMUSG00000008892.13	ENSMUST00000210096.2	517	5	0	0	0	0	multi-exon	FALSE	canonical	3	2053	junction_4	157.696504400066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCAGGTCTATGTGGG	NA	False	NA	NA	False	NA	NA	NA	23083727	23071934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ENSMUST00000210106.2	chr7	-	943	4	FSM	ENSMUSG00000050708.17	ENSMUST00000210106.2	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	31741.9424561398	13619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109263	45107368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45107708_45107958_45108106_45108507_45108655_45108953
ENSMUST00000210108.2	chr7	-	350	2	FSM	ENSMUSG00000049600.9	ENSMUST00000210108.2	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCGGTCACTTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	12743961	12742175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12742257_12743692
ENSMUST00000210136.2	chr8	+	1552	9	FSM	ENSMUSG00000091490.4	ENSMUST00000210136.2	1552	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	178.11092049619	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633577	43646918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_43633650_43635378_43635395_43636158_43636403_43636739_43636836_43638315_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
ENSMUST00000210139.2	chr7	+	1077	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	50.5151242478703	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803726	44809489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUST00000210167.2	chr7	-	1897	9	FSM	ENSMUSG00000025494.9	ENSMUST00000210167.2	1897	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	41.6921380478382	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140680437	140671087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ENSMUST00000210184.2	chr8	-	1603	1	FSM	ENSMUSG00000109617.2	ENSMUST00000210184.2	1603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGGGGCTCAGCACTC	NA	False	NA	NA	False	NA	NA	NA	13797478	13795875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13795900_13797500
ENSMUST00000210191.2	chr7	-	562	7	FSM	ENSMUSG00000074129.15	ENSMUST00000210191.2	562	7	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	7369.60067703053	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAATAAAGACTGTTT	NA	False	NA	3	True	NA	NA	NA	44778160	44775371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000210198.2	chr7	+	740	3	FSM	ENSMUSG00000063229.16	ENSMUST00000210198.2	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	7665	junction_2	326	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCGTGAGTGAGCCACC	NA	False	NA	NA	False	NA	NA	NA	46498410	46500770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_46498515_46499601_46499776_46500308
ENSMUST00000210275.2	chr5	-	1776	4	FSM	ENSMUSG00000090963.3	ENSMUST00000210275.2	1776	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.077477638554	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAGATATGGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	110220379	110194004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_110195551_110196887_110196949_110197131_110197259_110220337
ENSMUST00000210277.2	chr1	+	1226	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAATACGCTTAAGACTT	NA	False	NA	3	True	ATTAAA	-17	NA	185064368	185088978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
ENSMUST00000210277.2-0	chr1	+	2214	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	8	-996	0	0	multi-exon	FALSE	canonical	3	122	junction_7	59.2152382790481	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064376	185089974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
ENSMUST00000210279.2	chr8	-	2199	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	21.0218140669797	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTCCTGTTCTGT	9262	False	NA	-3	True	ACTAAA	-17	NA	84831392	84823700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ENSMUST00000210282.2	chr7	-	2117	3	FSM	ENSMUSG00000049600.9	ENSMUST00000210282.2	3908	3	-22	1813	0	0	multi-exon	FALSE	canonical	3	10	junction_2	93	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATTTTAGGATTCCAA	NA	False	NA	-45	True	NA	NA	NA	12743749	12739637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12740308_12740950_12742257_12743608
ENSMUST00000210297.2	chr7	-	601	5	FSM	ENSMUSG00000040212.13	ENSMUST00000210297.2	601	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	26.1951808545007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCCTGACTCGGCTCCT	4600	False	NA	NA	False	AATAAA	-12	NA	45570586	45567454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570550
ENSMUST00000210314.2	chr7	-	1658	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_9	176.376561249007	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGGTCCTTGTCGTTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	140748602	140740238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
ENSMUST00000210316.2	chr8	+	902	1	FSM	ENSMUSG00000031505.12	ENSMUST00000210316.2	902	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGAGTTTGTGGTTGTTC	3926	False	NA	33	True	NA	NA	NA	11562385	11563287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11562400_11563300
ENSMUST00000210317.2	chr8	-	3013	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAGTAAATAAAAAT	3637	False	NA	NA	False	NA	NA	NA	13250620	13225161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ENSMUST00000210317.2-0	chr8	-	1243	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	3	1767	0	0	multi-exon	FALSE	canonical	3	341	junction_2	30.9812319750826	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGTGTTCTCCATTT	3640	False	NA	-28	True	TTTAAA	-11	NA	13250617	13226928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ENSMUST00000210321.2	chr8	-	1617	9	FSM	ENSMUSG00000037363.10	ENSMUST00000210321.2	1617	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_8	3.77491721763537	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAATGATCAGAC	2349	False	NA	NA	False	ATTAAA	-3	NA	26087529	26070295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26070425_26071688_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084183_26086377_26086462_26087290
ENSMUST00000210325.2	chr10	+	2360	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	1.24721912892465	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTTATCTATATTA	NA	False	NA	NA	False	AATAAA	-11	NA	81883956	81897415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
ENSMUST00000210337.2	chr8	+	4349	2	FSM	ENSMUSG00000046794.10	ENSMUST00000210337.2	4349	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAATGAAAACTAT	NA	False	NA	NA	False	NA	NA	NA	35842892	35855283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_35843096_35851137
ENSMUST00000210369.2	chr8	-	1828	16	FSM	ENSMUSG00000070003.8	ENSMUST00000210369.2	1828	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	378.619504105228	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	False	NA	-11	True	AATAAA	-16	NA	71061522	71050140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71061222
ENSMUST00000210375.2	chr7	-	710	4	FSM	ENSMUSG00000050708.17	ENSMUST00000210375.2	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	30194.0672355054	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45108845	45107368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108747
ENSMUST00000210381.2	chr10	+	3330	4	FSM	ENSMUSG00000073427.5	ENSMUST00000210381.2	3330	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	14.0554457615387	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATGTTTATGTTGTC	NA	False	NA	3	True	AATAAA	-15	NA	82190149	82215470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82212394
ENSMUST00000210388.2	chr8	+	2522	1	FSM	ENSMUSG00000037656.10	ENSMUST00000210388.2	2522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6824	False	NA	NA	False	NA	NA	NA	23028794	23031316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_23028800_23031300
ENSMUST00000210390.2	chr8	+	1326	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTTGAGTCTGTGTTT	NA	False	NA	70	True	NA	NA	NA	111782970	111784296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111783000_111784300
ENSMUST00000210392.2	chr7	-	1100	5	FSM	ENSMUSG00000003873.12	ENSMUST00000210392.2	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	3046	junction_1	70.515955641259	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCCCACTGCCT	9982	False	NA	NA	False	NA	NA	NA	45116255	45111290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643
ENSMUST00000210410.2	chr7	-	1487	6	FSM	ENSMUSG00000046574.9	ENSMUST00000210410.2	1487	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	2.4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCCTGTCCCCTGGCCC	NA	False	NA	-3	True	TATAAA	-17	NA	44683818	44677678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168
ENSMUST00000210414.2	chr8	-	2331	2	FSM	ENSMUSG00000050052.13	ENSMUST00000210414.2	323	2	-50	-1958	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4814	False	NA	-4	True	ATTAAA	-18	NA	14024743	14002007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_14004136_14024540
ENSMUST00000210428.2	chr14	-	1180	6	FSM	ENSMUSG00000054733.10	ENSMUST00000210428.2	1180	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	27.7748087302145	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACCGCCTGCTGTGAGT	NA	False	NA	-5	True	AATAAA	-19	NA	64654397	64360074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64654346
ENSMUST00000210429.2	chr8	+	1632	1	FSM	ENSMUSG00000109909.2	ENSMUST00000210429.2	1632	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTTCTTGGTCCTGA	NA	False	NA	NA	False	NA	NA	NA	104879337	104880969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_104879300_104881000
ENSMUST00000210446.2	chr8	+	429	2	FSM	ENSMUSG00000109772.2	ENSMUST00000210446.2	429	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGTTTTGTTACTTC	NA	False	NA	NA	False	NA	NA	NA	11924158	11944113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11924331_11943856
ENSMUST00000210489.2	chr13	-	6330	10	FSM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	29.6177290915966	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAGTAGTAATTTCAT	8750	False	NA	NA	False	AATAAA	-20	NA	103901090	103875855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389
ENSMUST00000210490.3	chr18	+	2839	1	FSM	ENSMUSG00000110185.3	ENSMUST00000210490.3	2839	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCATCAGTCTTTGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	36431731	36434570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36431700_36434600
ENSMUST00000210495.2	chr7	-	733	6	FSM	ENSMUSG00000063511.12	ENSMUST00000210495.2	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_3	119.034448795296	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGGAGGTGGGGGGA	9984	False	NA	NA	False	NA	NA	NA	45044223	45032963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082
ENSMUST00000210530.2	chr8	-	2398	7	FSM	ENSMUSG00000031508.15	ENSMUST00000210530.2	2398	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	160.305350988529	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTCTCTGAAACTGCT	NA	False	NA	-2	True	AATAAA	-15	NA	11685754	11661582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11670261_11670374_11678438_11678531_11682865_11683019_11685410
ENSMUST00000210558.2	chr7	+	2815	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	20.4328167417025	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTCAAGGTGCCCA	NA	False	NA	58	True	AATAAA	-29	NA	67925742	68012840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ENSMUST00000210564.3	chr18	+	2524	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTATTTCCTCGCTTTT	NA	False	NA	85	True	CATAAA	-20	NA	67338436	67340960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67338400_67341000
ENSMUST00000210573.2	chr7	-	2279	4	FSM	ENSMUSG00000110097.2	ENSMUST00000210573.2	2279	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAGTAGTTTGGAGGA	NA	False	NA	NA	False	NA	NA	NA	10532984	10528168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_10529709_10529792_10529953_10531798_10532271_10532877
ENSMUST00000210587.2	chr7	-	930	6	FSM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	1091.38616447159	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCTGTGAGCTTATGA	7091	False	NA	-7	True	AATAAA	-21	NA	12768578	12765936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768428
ENSMUST00000210642.2	chr7	-	1602	7	FSM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	28.0475786239502	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	871	False	NA	-7	True	CATAAA	-10	NA	44753169	44742487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751825_44752096_44752426_44752698_44753063
ENSMUST00000210656.2	chr8	-	3373	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1.96452920568771	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	False	NA	-1	True	AATAAA	-18	NA	23295638	23277369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
ENSMUST00000210663.2	chr7	-	1279	2	FSM	ENSMUSG00000110221.2	ENSMUST00000210663.2	1279	2	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGAGCTTCAGACAGC	2896	False	NA	NA	False	NA	NA	NA	4909515	4901448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4902496_4909283
ENSMUST00000210676.2	chr8	-	4985	11	FSM	ENSMUSG00000031714.10	ENSMUST00000210676.2	4985	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	194.66638127833	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGCTGTGTTACTTT	NA	False	NA	-7	True	AATAAA	-17	NA	81607148	81491066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
ENSMUST00000210682.2	chr7	-	6694	33	FSM	ENSMUSG00000063550.9	ENSMUST00000210682.2	6694	33	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_23	43.7886324967736	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGTATTGACTTTCT	9970	False	NA	-6	True	AATAAA	-20	NA	101859383	101768604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ENSMUST00000210683.2	chr7	-	2545	5	FSM	ENSMUSG00000092178.3	ENSMUST00000210683.2	2545	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	6.67083203206317	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTGTCTCACTTG	NA	False	NA	NA	False	NA	NA	NA	9610893	9602806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_9604820_9605989_9606077_9606845_9606972_9608117_9608157_9610613
ENSMUST00000210684.2	chr7	-	1440	5	FSM	ENSMUSG00000025147.8	ENSMUST00000210684.2	958	5	16	-498	0	0	multi-exon	FALSE	canonical	2	4	junction_3	69.7006994226026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGCCATTTCATATTATT	NA	False	NA	-19	True	AATAAA	-33	NA	141614786	141562271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570130_141570243_141614721
ENSMUST00000210740.2	chr8	+	1866	2	FSM	ENSMUSG00000045969.9	ENSMUST00000210740.2	1866	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11606062	11613250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11606096_11611417
ENSMUST00000210743.2	chr7	+	1163	5	FSM	ENSMUSG00000031015.9	ENSMUST00000210743.2	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	17.753520777581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATGCAGTAAGA	NA	False	NA	NA	False	ATTAAA	-6	NA	109820938	109865484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042
ENSMUST00000210751.2	chr7	+	5475	1	FSM	ENSMUSG00000030978.11	ENSMUST00000210751.2	5475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	102091249	102096724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_102091200_102096700
ENSMUST00000210789.3	chr2	-	3773	26	FSM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_25	95.4321874421833	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTAGTCTTTATTTCTAC	NA	False	NA	-3	True	ATTAAA	-16	NA	53081296	53028249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ENSMUST00000210792.2	chr7	-	464	4	FSM	ENSMUSG00000074129.15	ENSMUST00000210792.2	464	4	0	0	0	0	multi-exon	FALSE	canonical	3	15796	junction_2	745.970955645504	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	False	NA	-6	True	AATAAA	-14	NA	44776303	44775346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132
ENSMUST00000210812.2	chr8	+	905	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	-31	3717	0	0	multi-exon	FALSE	canonical	3	128	junction_1	166.717388115337	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATTTGAAGTCAAT	NA	False	NA	2	True	AATAAA	-20	NA	80438448	80501971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUST00000210845.2	chr8	-	826	4	FSM	ENSMUSG00000056228.11	ENSMUST00000210845.2	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	105.379736614251	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTCAGCCTGTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	11600744	11596676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11597088_11597726_11597845_11600257_11600309_11600498
ENSMUST00000210855.2	chr7	-	2301	6	FSM	ENSMUSG00000073968.5	ENSMUST00000210855.2	2301	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	1.95959179422654	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATCCACAGATCACGAGT	NA	False	NA	NA	False	ATTAAA	-21	NA	102336477	102326795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_102328045_102328242_102328344_102329343_102329605_102330869_102330966_102333254_102333719_102336347
ENSMUST00000210872.2	chr7	+	858	4	FSM	ENSMUSG00000003273.15	ENSMUST00000210872.2	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	4.64279609239471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGAGCCTGGAGCTCC	NA	False	NA	NA	False	NA	NA	NA	45350439	45352901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45350791_45351857_45352044_45352256_45352559_45352882
ENSMUST00000210878.2	chr8	+	1916	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210878.2	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	45.5894183087303	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTGTGTGCTTTT	NA	False	NA	18	True	AATAAA	-14	NA	71047139	71049938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUST00000210882.2	chr7	+	1757	5	FSM	ENSMUSG00000025470.12	ENSMUST00000210882.2	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	31.3318926973779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	19	True	AATAAA	-16	NA	139616440	139620515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238
ENSMUST00000210916.2	chr7	+	485	3	FSM	ENSMUSG00000025481.13	ENSMUST00000210916.2	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	125.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAGAGTTTCAACACC	NA	False	NA	6	True	NA	NA	NA	140415554	140417858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_140415665_140416659_140416796_140417619
ENSMUST00000210922.2	chr8	-	2931	22	FSM	ENSMUSG00000037148.9	ENSMUST00000210922.2	2208	22	-170	-553	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.01868566087306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTGTCCGGCCTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	78244582	77976994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_77977637_77983954_77984047_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
ENSMUST00000210927.2	chr7	-	873	3	FSM	ENSMUSG00000054662.9	ENSMUST00000210927.2	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	7	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATGTGCCTGTGGGGTT	NA	False	NA	NA	False	NA	NA	NA	140682589	140681499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140681841_140681931_140682045_140682170
ENSMUST00000210940.2	chr7	+	1751	1	FSM	ENSMUSG00000109904.2	ENSMUST00000210940.2	1751	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCCGACCCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	109719196	109720947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109719200_109720900
ENSMUST00000210958.2	chr8	-	457	2	FSM	ENSMUSG00000031711.8	ENSMUST00000210958.2	457	2	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTGGGAGGCTCC	NA	False	NA	NA	False	AATAGA	-23	NA	83500774	83499272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_83499641_83500685
ENSMUST00000210962.2	chr7	-	257	2	FSM	ENSMUSG00000030834.8	ENSMUST00000210962.2	257	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTCCTCATCCTAAAAC	NA	False	NA	NA	False	ATTAAA	-19	NA	45622743	45616982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45617145_45622648
ENSMUST00000210966.2	chr7	-	956	1	FSM	ENSMUSG00000030751.19	ENSMUST00000210966.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113875302	113874346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_113874300_113875300
ENSMUST00000210967.2	chr7	-	658	8	FSM	ENSMUSG00000074129.15	ENSMUST00000210967.2	658	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	5939.18297480076	3146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGCCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	44778144	44775345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44775457_44775538_44775678_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUST00000210999.2	chr7	-	1254	10	FSM	ENSMUSG00000052833.10	ENSMUST00000210999.2	1254	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	915.179615373431	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGGCCGTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	16121731	16054666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16054806_16061755_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUST00000211007.2	chr8	+	2241	2	FSM	ENSMUSG00000045969.9	ENSMUST00000211007.2	2241	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGTTTATTTCCTTAT	NA	False	NA	15	True	NA	NA	NA	11605570	11613250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_11605979_11611417
ENSMUST00000211029.2	chr7	+	427	3	FSM	ENSMUSG00000030825.20	ENSMUST00000211029.2	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	8.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGAGTCAACTGGTAAACT	NA	False	NA	NA	False	NA	NA	NA	45208629	45215433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45208897_45212338_45212444_45215378
ENSMUST00000211049.2	chr8	-	2083	1	FSM	ENSMUSG00000038215.16	ENSMUST00000211049.2	2083	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGATGAAAAAAATGTAA	NA	False	NA	NA	False	ATTAAA	-24	NA	56987610	56985527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_56985500_56987600
ENSMUST00000211083.2	chr8	+	2625	5	FSM	ENSMUSG00000031533.5	ENSMUST00000211083.2	2625	5	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_2	50.8551865594848	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACTGTGTCGTGTGAGA	NA	False	NA	NA	False	NA	NA	NA	22901413	22916212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362
ENSMUST00000211115.2	chr8	+	2601	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	22.2816566310098	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTGAGGGTTTG	NA	False	NA	21	True	CATAAA	-17	NA	47070325	47092724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUST00000211120.2	chr7	-	3128	1	FSM	ENSMUSG00000025465.14	ENSMUST00000211120.2	3128	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	139696335	139693207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139693200_139696300
ENSMUST00000211147.2	chr8	-	475	2	FSM	ENSMUSG00000110202.2	ENSMUST00000211147.2	475	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATCAAGCATTATTTTT	NA	False	NA	NA	False	AAAACA	-38	NA	80479042	80473895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_80473931_80478602
ENSMUST00000211164.2	chr12	+	363	4	FSM	ENSMUSG00000109975.2	ENSMUST00000211164.2	363	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	54.7783412186483	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACAAAGGCGTTTTTT	6100	False	NA	NA	False	ACTAAA	-18	NA	21593307	21604522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_21593347_21595309_21595401_21599867_21599956_21604377
ENSMUST00000211174.2	chr8	-	2447	7	FSM	ENSMUSG00000031508.15	ENSMUST00000211174.2	2447	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	195.638626610959	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGTCTCTGAAACTGC	NA	False	NA	-3	True	AATAAA	-14	NA	11685754	11661583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696_11673859_11678438_11678531_11682865_11683019_11685410
ENSMUST00000211186.2	chr7	-	2610	15	FSM	ENSMUSG00000025474.10	ENSMUST00000211186.2	2610	15	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_14	66.201801874485	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCGAGCAGTTGTGCAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	139616303	139578440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ENSMUST00000211217.2	chr8	+	997	6	FSM	ENSMUSG00000031629.15	ENSMUST00000211217.2	997	6	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	30.0865418418269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCTTTTATTTTTGAG	NA	False	NA	21	True	NA	NA	NA	47005072	47016034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452
ENSMUST00000211218.2	chr8	-	943	1	FSM	ENSMUSG00000065954.12	ENSMUST00000211218.2	943	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25691418	25690475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_25690500_25691400
ENSMUST00000211221.2	chr8	-	641	1	FSM	ENSMUSG00000052456.10	ENSMUST00000211221.2	641	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACAGCTGGTTTGTGCCA	8418	False	NA	NA	False	NA	NA	NA	85751892	85751251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85751300_85751900
ENSMUST00000211228.2	chr8	+	2318	1	FSM	ENSMUSG00000091490.4	ENSMUST00000211228.2	2318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACAAAACAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	43638082	43640400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_43638100_43640400
ENSMUST00000211231.2	chr7	-	1334	5	FSM	ENSMUSG00000025139.15	ENSMUST00000211231.2	1334	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	141.704798789596	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGGCTGGCTAATGAAC	2876	False	NA	NA	False	NA	NA	NA	141456045	141443712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_141444592_141445720_141445904_141446476_141446627_141452431_141452521_141456012
ENSMUST00000211235.2	chr7	-	3748	23	FSM	ENSMUSG00000063550.9	ENSMUST00000211235.2	3748	23	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_13	14.0777064247632	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTTGATCTCTCTATA	9976	False	NA	NA	False	AAGAAA	-17	NA	101859349	101783684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ENSMUST00000211240.2	chr7	-	4073	4	FSM	ENSMUSG00000063535.8	ENSMUST00000211240.2	4073	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	10.4029910228848	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTTGCGTCTTTCTT	NA	False	NA	NA	False	NA	NA	NA	7139723	7130071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_7133642_7137165_7137250_7138290_7138418_7139431
ENSMUST00000211247.2	chr8	+	6484	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	36.1727924568649	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAATGTAAATTAGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	41692814	41785129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ENSMUST00000211248.2	chr8	-	1837	5	FSM	ENSMUSG00000051176.7	ENSMUST00000211248.2	1837	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	1844.21519555067	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCAATTTCTGGGGAA	NA	False	NA	NA	False	AATAAA	-21	NA	43759973	43748099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_43749574_43753664_43753743_43755911_43756017_43757512_43757597_43759877
ENSMUST00000211289.2	chr8	+	1253	1	FSM	ENSMUSG00000018796.14	ENSMUST00000211289.2	1253	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	2346	False	NA	NA	False	NA	NA	NA	46924213	46925466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_46924200_46925500
ENSMUST00000211290.2	chr7	-	3035	11	FSM	ENSMUSG00000063511.12	ENSMUST00000211290.2	3035	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	571.982875617793	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9091	False	NA	-10	True	AATAAA	-15	NA	45045116	45025886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45031248_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ENSMUST00000211323.3	chr18	+	2731	8	FSM	ENSMUSG00000054477.17	ENSMUST00000211323.3	1725	8	-685	-321	0	0	multi-exon	FALSE	canonical	2	15	junction_3	2.55550625999976	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTTGTTTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	45692535	45818950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_45693692_45694287_45694384_45725072_45725492_45788264_45788407_45803284_45803396_45810003_45810132_45816137_45816208_45818341
ENSMUST00000211338.2	chr10	+	2325	1	FSM	ENSMUSG00000061371.8	ENSMUST00000211338.2	2325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTTATCTATATTATCA	NA	False	NA	NA	False	AATAAA	-14	NA	81895093	81897418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81895100_81897400
ENSMUST00000211344.2	chr7	-	606	5	FSM	ENSMUSG00000033916.6	ENSMUST00000211344.2	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	1201.14705594278	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCAAGGCTGTGAGCTT	7098	False	NA	-11	True	AATAAA	-17	NA	12768571	12765940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12767755_12767970_12768561
ENSMUST00000211352.2	chr7	-	1453	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	48.2482008875864	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGTC	6660	False	NA	-4	True	AATAAA	-25	NA	44741645	44732336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
ENSMUST00000211365.2	chr7	-	801	6	FSM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	1143.13684220219	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	9977	False	NA	-2	True	AATAAA	-22	NA	45116260	45111120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ENSMUST00000211366.2	chr7	-	4008	10	FSM	ENSMUSG00000063511.12	ENSMUST00000211366.2	4008	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	443.86935014709	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9125	False	NA	-9	True	AATAAA	-16	NA	45045082	45025885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45026703_45026779_45026868_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ENSMUST00000211373.2	chr7	-	1428	7	FSM	ENSMUSG00000030798.16	ENSMUST00000211373.2	1428	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.4661337085446	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTTGCGGAGCCTCCA	4385	False	NA	NA	False	NA	NA	NA	44888298	44883593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44884192_44884830_44885068_44885538_44885644_44886425_44886501_44886583_44886709_44887923_44887997_44888083
ENSMUST00000211389.2	chr8	-	1359	3	FSM	ENSMUSG00000031508.15	ENSMUST00000211389.2	1359	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	21.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACTGACAATACCAG	NA	False	NA	NA	False	NA	NA	NA	11685754	11677668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11678531_11682865_11683019_11685410
ENSMUST00000211400.2	chr8	-	3797	15	FSM	ENSMUSG00000038225.16	ENSMUST00000211400.2	3797	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	36.5959739059155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAATTGAAAAATAGTG	NA	False	NA	-10	True	AATAAA	-19	NA	47070235	47028628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_47029757_47031053_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
ENSMUST00000211439.2	chr9	+	3533	14	FSM	ENSMUSG00000032536.13	ENSMUST00000211439.2	3533	14	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	23.6693195168457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGCCTTTCTTTTCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	121126599	121284948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
ENSMUST00000211462.2	chr8	-	1584	8	FSM	ENSMUSG00000031711.8	ENSMUST00000211462.2	761	8	-46	-777	0	0	multi-exon	FALSE	canonical	2	30	junction_6	164.077259054311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500789	83490249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83499508_83499641_83500685
ENSMUST00000211473.2	chr7	+	1607	1	FSM	ENSMUSG00000110126.2	ENSMUST00000211473.2	1607	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGGTTCAGCACTCTC	NA	False	NA	NA	False	NA	NA	NA	136412637	136414244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_136412600_136414200
ENSMUST00000211500.2	chr7	-	825	3	FSM	ENSMUSG00000050708.17	ENSMUST00000211500.2	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	6244.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCTTTTTGAGACAGC	NA	False	NA	-40	True	AGTAAA	-2	NA	45108887	45107388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45107708_45107958_45108085_45108507
ENSMUST00000211509.2	chr8	-	3030	16	FSM	ENSMUSG00000058355.9	ENSMUST00000211509.2	3030	16	0	0	0	0	multi-exon	FALSE	canonical	3	1167	junction_8	95.1564793146297	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80438299	80412834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUST00000211513.2	chr7	+	1156	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	20	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATCAACACAATCCTGA	NA	False	NA	NA	False	NA	NA	NA	45354692	45359538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45355187_45357683_45357896_45359088
ENSMUST00000211533.2	chr7	-	1542	2	FSM	ENSMUSG00000110357.2	ENSMUST00000211533.2	1542	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAGGACCAAG	NA	False	NA	NA	False	NA	NA	NA	45288189	45285103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45286563_45288106
ENSMUST00000211549.2	chr7	-	931	4	FSM	ENSMUSG00000044465.20	ENSMUST00000211549.2	931	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	88.8681920349208	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105033650	105027816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581
ENSMUST00000211554.2	chr8	+	4638	18	FSM	ENSMUSG00000036712.16	ENSMUST00000211554.2	4638	18	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	16.8699483019167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTATAAATATTGCTGT	NA	False	NA	8	True	TATAAA	-17	NA	89423674	89475083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_89423728_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUST00000211570.2	chr7	+	3557	27	FSM	ENSMUSG00000058325.7	ENSMUST00000211570.2	3557	27	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_11	21.2171430631769	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAGAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	134272382	134478672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948
ENSMUST00000211593.2	chr7	+	2589	21	FSM	ENSMUSG00000058325.7	ENSMUST00000211593.2	2589	21	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_11	23.1652217774836	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTGTTTCTGTTTTGA	NA	False	NA	7	True	NA	NA	NA	134272415	134384915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
ENSMUST00000211601.2	chr8	+	4854	25	FSM	ENSMUSG00000031691.15	ENSMUST00000211601.2	2941	25	0	-1913	0	0	multi-exon	FALSE	canonical	3	53	junction_1	77.0544540496452	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763796	85784212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUST00000211615.2	chr7	-	548	3	FSM	ENSMUSG00000003873.12	ENSMUST00000211615.2	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	3184	junction_2	25.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTGCTCTGGCCT	8909	False	NA	NA	False	NA	NA	NA	45115468	45112583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45112928_45114612_45114749_45115400
ENSMUST00000211626.2	chr7	-	726	6	FSM	ENSMUSG00000033916.6	ENSMUST00000211626.2	726	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	1108.87882115225	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATTTACCAAGGCTGTG	7003	False	NA	-16	True	AATAAA	-12	NA	12768666	12765945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766718_12766749_12767755_12767970_12768561
ENSMUST00000211638.2	chr7	-	3060	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCCTGCGCAATGAGCT	NA	False	NA	NA	False	NA	NA	NA	139616582	139575960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ENSMUST00000211638.2-0	chr7	-	2874	18	FSM	ENSMUSG00000025474.10	ENSMUST00000211638.2	3060	18	279	-93	0	0	multi-exon	FALSE	canonical	3	194	junction_17	64.0289186395126	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616303	139575867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616259
ENSMUST00000211643.2	chr8	+	1131	2	FSM	ENSMUSG00000038398.9	ENSMUST00000211643.2	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGGAGCCTAGACAAGT	NA	False	NA	NA	False	AATACA	-12	NA	13835644	13837037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_13835885_13836146
ENSMUST00000211665.2	chr7	-	1969	2	FSM	ENSMUSG00000070822.6	ENSMUST00000211665.2	1969	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCCTCATTGTTTTGTG	NA	False	NA	1	True	AATAAA	-22	NA	12505043	12502016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_12503673_12504730
ENSMUST00000211672.2	chr8	+	5109	35	FSM	ENSMUSG00000031644.20	ENSMUST00000211672.2	5109	35	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_18	18.7248331678183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGGTCACCTGTGTTAA	NA	False	NA	NA	False	CATAAA	-40	NA	61446298	61583942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ENSMUST00000211690.2	chr8	-	2625	4	FSM	ENSMUSG00000031508.15	ENSMUST00000211690.2	2625	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	197.973623383408	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCTGTCTCTGAAACTG	4115	False	NA	-4	True	AATAAA	-13	NA	11674626	11661584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11673696
ENSMUST00000211694.2	chr7	-	604	2	FSM	ENSMUSG00000050708.17	ENSMUST00000211694.2	604	2	0	0	0	0	multi-exon	FALSE	canonical	3	56898	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45108223	45107368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45107708_45107958
ENSMUST00000211710.2	chr18	+	2003	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	1.63299316185545	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAAGTGTTGTCTTGGTC	NA	False	NA	3	True	NA	NA	NA	90597900	90610646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
ENSMUST00000211718.2	chr8	-	950	2	FSM	ENSMUSG00000015994.11	ENSMUST00000211718.2	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCATTTTCTAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	26490458	26489304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26489593_26489796
ENSMUST00000211719.2	chr8	-	1622	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	0	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAATTTTCTGTCTTG	NA	False	NA	NA	False	AGTAAA	-10	NA	79235508	79231905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_79233447_79235427
ENSMUST00000211725.2	chr7	-	493	5	FSM	ENSMUSG00000003429.12	ENSMUST00000211725.2	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	12273.9079045755	5255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTCTGGCCAATGCCCTA	NA	False	NA	-55	True	NA	NA	NA	44773759	44771856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44771973_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUST00000211731.2	chr7	-	580	1	FSM	ENSMUSG00000110275.2	ENSMUST00000211731.2	580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATACTTGGCTGAACTGG	2385	False	NA	-83	True	GGGGCT	-31	NA	140758377	140757797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_140757800_140758400
ENSMUST00000211733.2	chr5	-	7319	13	FSM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	0	2919	0	-2919	multi-exon	FALSE	canonical	1	1	junction_11	8.88194172964949	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGATCTAGTTGCTTG	NA	False	NA	-2	True	NA	NA	NA	113369102	113237107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113341626_113341774_113369076
ENSMUST00000211735.2	chr7	-	4209	11	FSM	ENSMUSG00000038406.18	ENSMUST00000211735.2	4209	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	69.4230509269075	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGCGTAGTGGTGTACC	7013	False	NA	-6	True	ATTAAA	-17	NA	44663828	44652371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44652796_44652920_44653050_44654828_44655048_44655264_44655348_44655729_44658397_44661546_44661663_44661748_44661850_44662121_44662220_44662640_44662699_44662903_44663018_44663628
ENSMUST00000211741.2	chr7	-	1422	9	FSM	ENSMUSG00000052833.10	ENSMUST00000211741.2	1663	9	0	241	0	-241	multi-exon	FALSE	canonical	3	51	junction_1	1013.32101743475	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATAGTTTTAGAGACA	NA	False	NA	-15	True	ATTAAA	-21	NA	16121731	16054399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_16054806_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUST00000211743.2	chr7	-	3673	23	FSM	ENSMUSG00000038260.11	ENSMUST00000211743.2	3673	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	42.3194512064278	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGCACATGCTTGGCT	3314	False	NA	-10	True	AATAAA	-15	NA	44983080	44952781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44982805_44982877_44982999
ENSMUST00000211748.2	chr7	+	1732	2	FSM	ENSMUSG00000059824.13	ENSMUST00000211748.2	1732	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGCCTTCCCCCACCTCC	NA	False	NA	NA	False	AATACA	-20	NA	45356527	45359452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_45357896_45359088
ENSMUST00000211765.2	chr7	-	2203	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	0	2650	0	0	multi-exon	FALSE	canonical	3	464	junction_7	37.8483817355511	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCCTGCCCTCTTCCAA	NA	False	NA	-4	True	AATAAA	-19	NA	45159830	45142531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ENSMUST00000211768.2	chr11	-	557	2	FSM	ENSMUSG00000019761.11	ENSMUST00000211768.2	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATAAAAATCTGTCA	8339	False	NA	NA	False	AATAAA	-25	NA	99276923	99276092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_99276463_99276736
ENSMUST00000211798.2	chr7	+	2631	16	FSM	ENSMUSG00000061079.15	ENSMUST00000211798.2	2631	16	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_4	56.3191698171137	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCAGCTTGTGCCTGT	NA	False	NA	NA	False	ATTAAA	-27	NA	109660916	109694225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUST00000211807.2	chr8	+	1085	1	FSM	ENSMUSG00000031765.9	ENSMUST00000211807.2	1085	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGTTTTCTTGGTGT	NA	False	NA	27	True	AATAAA	-16	NA	94905868	94906953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94905900_94907000
ENSMUST00000211808.2	chr8	+	2963	8	FSM	ENSMUSG00000011306.8	ENSMUST00000211808.2	2963	8	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	42.1644012728021	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAAAGGCTGTCTGTGT	2378	False	NA	NA	False	CATAAA	-19	NA	70495683	70519561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486
ENSMUST00000211811.2	chr8	+	2484	8	FSM	ENSMUSG00000031808.8	ENSMUST00000211811.2	2484	8	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_6	41.9513809945148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTGCCAGAGCACAGCG	NA	False	NA	19	True	AATAAA	-15	NA	72033159	72039946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUST00000211818.2	chr8	-	887	3	FSM	ENSMUSG00000031843.3	ENSMUST00000211818.2	887	3	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_1	49.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTCAGCTTGTGCCAGA	NA	False	NA	NA	False	NA	NA	NA	118528666	118520712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_118521411_118525782_118525896_118528590
ENSMUST00000211840.2	chr9	+	4461	11	FSM	ENSMUSG00000038708.11	ENSMUST00000211840.2	4461	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	60.3685348505329	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118385847	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
ENSMUST00000211866.2	chr8	-	2920	8	FSM	ENSMUSG00000031951.9	ENSMUST00000211866.2	2920	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	117.289281309948	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTACTGAGAACTC	NA	False	NA	-15	True	ATTAAA	-17	NA	112660431	112638704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112653477_112653558_112659991_112660162_112660259
ENSMUST00000211896.2	chr5	+	5256	18	FSM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	6.08645896223428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTCAGCAGTCGGGAAA	NA	False	NA	-90	True	NA	NA	NA	107585862	107658687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
ENSMUST00000211898.2	chr8	+	1078	4	FSM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	271.261661295674	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACACCCCATTTGTGGTA	447	False	NA	18	True	NA	NA	NA	70583982	70586398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_70584250_70584567_70584659_70585236_70585305_70585746
ENSMUST00000211914.2	chr8	+	1939	5	FSM	ENSMUSG00000031791.9	ENSMUST00000211914.2	820	5	-18	-1101	0	0	multi-exon	FALSE	canonical	3	7	junction_2	20.2484567313166	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTTTTTCTTTATTCA	NA	False	NA	NA	False	AATAAA	-18	NA	73325916	73341126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_73326072_73333406_73333564_73335028_73335117_73338543_73338662_73339705
ENSMUST00000211922.2	chr8	+	111	1	FSM	ENSMUSG00000110458.2	ENSMUST00000211922.2	111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	426	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGAGGCGGGCCGCTTCG	NA	False	NA	NA	False	NA	NA	NA	20697984	20698095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_20698000_20698100
ENSMUST00000211926.2	chr8	+	1409	4	FSM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	24.1430919496424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112370168	112397314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_112370245_112385017_112385074_112392751_112392837_112396122
ENSMUST00000211932.2	chr8	+	5002	17	FSM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_12	41.7738984744062	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGGTGATATGGCC	NA	False	NA	12	True	AAGAAA	-17	NA	124100594	124130549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ENSMUST00000211933.2	chr9	+	7674	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCATAGTATTTTCT	-8	True	NA	NA	False	NA	NA	NA	3335477	3391154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ENSMUST00000211933.2-0	chr9	+	3573	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	0	4101	0	124	multi-exon	FALSE	canonical	2	35	junction_1	12.2683493875181	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTCTATTTTTTTC	-8	True	NA	NA	False	TTTAAA	-41	NA	3335477	3387053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ENSMUST00000211945.2	chr7	-	1501	5	FSM	ENSMUSG00000019194.16	ENSMUST00000211945.2	1501	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	3.69966214673719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTATTCTCTCATTAAC	NA	False	NA	-1	True	AATAAA	-16	NA	30826269	30815948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30816721_30817130_30817273_30822330_30822572_30824479_30824647_30826090
ENSMUST00000211948.2	chr8	-	4251	26	FSM	ENSMUSG00000031833.11	ENSMUST00000211948.2	4251	26	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_25	10.6046027742674	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTCTTGTCCTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	71245081	71231847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71244869
ENSMUST00000211983.2	chr8	+	3397	15	FSM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	38.5556184529014	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTCACAGCTCTCATT	8240	False	NA	8	True	AATAAA	-25	NA	95328693	95386903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUST00000211995.2	chr8	-	2312	9	FSM	ENSMUSG00000035824.8	ENSMUST00000211995.2	2312	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	19.1012924955355	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTAAATTCATTTTCA	NA	False	NA	-7	True	AATAAA	-17	NA	104975183	104953329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ENSMUST00000212002.2	chr8	+	111	1	FSM	ENSMUSG00000110669.2	ENSMUST00000212002.2	111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGAGGCGGGCCGCTTCG	NA	False	NA	NA	False	NA	NA	NA	19834761	19834872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_19834800_19834900
ENSMUST00000212005.2	chr8	-	878	8	FSM	ENSMUSG00000031708.18	ENSMUST00000212005.2	878	8	0	0	0	0	multi-exon	FALSE	canonical	3	3555	junction_3	211.176587292266	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84299882	84298328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656
ENSMUST00000212014.2	chr8	+	3181	1	FSM	ENSMUSG00000050079.11	ENSMUST00000212014.2	3181	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	8140	False	NA	NA	False	NA	NA	NA	95328593	95331774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95328600_95331800
ENSMUST00000212019.2	chr8	-	795	4	FSM	ENSMUSG00000045128.10	ENSMUST00000212019.2	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	16397	junction_3	7846.8208565989	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350042	71348022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71348152_71348243_71348690_71348776_71348957_71350002
ENSMUST00000212032.2	chr19	-	5074	16	FSM	ENSMUSG00000025195.10	ENSMUST00000212032.2	5074	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	21.6185105869947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCACTCCATGGTCGACTG	NA	False	NA	NA	False	NA	NA	NA	43900831	43836201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43889508_43891498_43899163_43899287_43900673
ENSMUST00000212048.2	chr19	-	4186	14	FSM	ENSMUSG00000025195.10	ENSMUST00000212048.2	4186	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_13	12.8730717519697	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCACTCCATGGTCGACTG	657	False	NA	NA	False	NA	NA	NA	43879130	43836201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43877748
ENSMUST00000212050.2	chr8	-	1874	2	FSM	ENSMUSG00000035569.18	ENSMUST00000212050.2	1874	2	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTGGTCTTTGTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	123626519	123623758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123625456_123626342
ENSMUST00000212066.2	chr9	-	2810	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTAGGGCTTGACATG	-1	True	NA	NA	False	AATAAA	-44	NA	4309469	4294793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ENSMUST00000212066.2-0	chr9	-	1008	6	FSM	ENSMUSG00000025894.12	ENSMUST00000212066.2	2810	6	-2	1804	0	-1633	multi-exon	FALSE	canonical	3	41	junction_5	303.486671865504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTATTTAACAAAACA	-3	True	NA	NA	False	AATAAA	-16	NA	4309471	4296597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309287
ENSMUST00000212075.2	chr9	+	2800	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	13	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGTCTGAAAGTTTA	-5	True	NA	14	True	AATAAA	-1	NA	4376561	4386870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_4376624_4383536_4384143_4384738
ENSMUST00000212086.2	chr8	-	2964	9	FSM	ENSMUSG00000002908.18	ENSMUST00000212086.2	2964	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.6558729831789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGGTGAAACATTTGG	NA	False	NA	-1	True	AATAAA	-21	NA	71308229	71295801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71297206_71299138_71299209_71299407_71299417_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644
ENSMUST00000212095.2	chr8	+	1257	6	FSM	ENSMUSG00000031622.17	ENSMUST00000212095.2	1257	6	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	28.5587114555261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTAGTTATGTGCAGC	NA	False	NA	21	True	AATAAA	-18	NA	73449917	73466531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996
ENSMUST00000212102.2	chr8	-	351	1	FSM	ENSMUSG00000059775.6	ENSMUST00000212102.2	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	479	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCGTTTTGTAAGGACA	NA	False	NA	NA	False	NA	NA	NA	108166196	108165845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_108165800_108166200
ENSMUST00000212117.2	chr8	+	3387	3	FSM	ENSMUSG00000003039.10	ENSMUST00000212117.2	3387	3	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_2	33.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACTTTGTGCGTGAAAC	NA	False	NA	18	True	AATATA	-14	NA	72973607	72977274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72973705_72973784_72975826_72976025
ENSMUST00000212121.2	chr8	-	2686	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212121.2	2686	22	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	89.8414577371977	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACATGAGACTATCTT	NA	False	NA	NA	False	TATAAA	-37	NA	73175295	73094844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUST00000212129.2	chr8	-	578	5	FSM	ENSMUSG00000045128.10	ENSMUST00000212129.2	578	5	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_3	13957.9624766654	4345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350044	71348022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348789_71348957_71350002
ENSMUST00000212158.2	chr8	+	1862	1	FSM	ENSMUSG00000110631.2	ENSMUST00000212158.2	1862	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGTTAGAGAGAGAG	2115	False	NA	NA	False	NA	NA	NA	122559985	122561847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_122560000_122561800
ENSMUST00000212168.2	chr8	-	6586	22	FSM	ENSMUSG00000001995.10	ENSMUST00000212168.2	6586	22	0	0	0	0	multi-exon	TRUE	canonical	3	164	junction_19	26.9293187551557	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296495	126144812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
ENSMUST00000212175.2	chr8	-	3393	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	31	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATTAGATGATTGGGTA	NA	False	NA	NA	False	AATAAA	-18	NA	48166966	48162479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48165330_48165922_48166054_48166554
ENSMUST00000212175.2-0	chr8	-	2612	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	0	781	0	-781	multi-exon	FALSE	canonical	3	65	junction_1	31	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTGTTTTTTTTTCT	NA	False	NA	-1	True	ATTAAA	-27	NA	48166966	48163260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48165330_48165922_48166054_48166554
ENSMUST00000212181.2	chr14	-	7368	53	FSM	ENSMUSG00000025558.20	ENSMUST00000212181.2	7368	53	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_52	12.7641758993886	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCTCAGTATATGCAAAC	NA	False	NA	NA	False	NA	NA	NA	121935829	121779917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865987_121866136_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_121935605
ENSMUST00000212184.2	chr8	+	2497	9	FSM	ENSMUSG00000031756.6	ENSMUST00000212184.2	2497	9	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	41.5985276181742	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTCCTTTGGATGAATA	NA	False	NA	12	True	AATAAA	-20	NA	117652847	117668246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117664014_117667182_117667310_117667573
ENSMUST00000212192.2	chr8	+	1713	9	FSM	ENSMUSG00000031728.11	ENSMUST00000212192.2	1713	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	6.08147802758507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGCAGAACAACAGCTCT	NA	False	NA	NA	False	NA	NA	NA	110432251	110451221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUST00000212193.2	chr8	+	1638	13	FSM	ENSMUSG00000033862.8	ENSMUST00000212193.2	1638	13	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	68.2322422970907	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2153	False	NA	10	True	GATAAA	-11	NA	123951608	123958989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954505_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUST00000212205.2	chr8	+	2758	23	FSM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	144.720334461373	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACCTGTTGCAAAGCCAG	NA	False	NA	10	True	AATAAA	-21	NA	108163031	108283844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUST00000212211.2	chr8	+	3207	11	FSM	ENSMUSG00000031808.8	ENSMUST00000212211.2	3207	11	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_9	36.8539007433406	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCCTGCCAGAGCACAGC	NA	False	NA	18	True	AATAAA	-14	NA	72031856	72039945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUST00000212219.2	chr8	-	2044	7	FSM	ENSMUSG00000014837.16	ENSMUST00000212219.2	2044	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	14.1037819986934	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCTTTGGGTGTCTGG	NA	False	NA	NA	False	AATAGA	-41	NA	106015710	106008313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015424
ENSMUST00000212270.2	chr8	-	3315	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_11	48.4964001390441	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGTGTCTCCTTTATC	NA	False	NA	-4	True	AATAAA	-15	NA	96580167	96562551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ENSMUST00000212289.2	chr8	-	338	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212289.2	338	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	187	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAATAGTACTGGTATG	NA	False	NA	-4	True	TTTAAA	-1	NA	96544306	96535179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96535388_96539051_96539129_96544253
ENSMUST00000212291.2	chr8	+	633	2	FSM	ENSMUSG00000031765.9	ENSMUST00000212291.2	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	14831	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTTGGTGTGG	NA	False	NA	29	True	AATAAA	-18	NA	94905838	94906955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94905967_94906450
ENSMUST00000212308.2	chr8	-	2887	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212308.2	2887	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.184486562417	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495350	70471216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70472304_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUST00000212320.2	chr8	-	1121	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_5	20.7590341779188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCAGGGTGCCTCCCA	9603	False	NA	2	True	AATAAA	-18	NA	70591746	70585915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUST00000212332.2	chr8	-	426	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212332.2	426	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	117.139043685509	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACAGAAGGCTGTGTCTT	NA	False	NA	-7	True	AATAAA	-20	NA	106663657	106662366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663613
ENSMUST00000212349.2	chr8	-	3116	7	FSM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.2591687354659	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGCCTACAGAAATGC	NA	False	NA	-5	True	AATAAA	-14	NA	112458768	112437108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
ENSMUST00000212385.2	chr8	-	339	2	FSM	ENSMUSG00000035559.10	ENSMUST00000212385.2	339	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCTGGGTAAGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	71213546	71213022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71213181_71213365
ENSMUST00000212398.2	chr8	+	518	4	FSM	ENSMUSG00000008450.9	ENSMUST00000212398.2	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	479.48606746066	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTACCTTCCCCGCTC	NA	False	NA	NA	False	NA	NA	NA	106587296	106603421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141
ENSMUST00000212401.2	chr8	-	4269	17	FSM	ENSMUSG00000031858.17	ENSMUST00000212401.2	4269	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_12	31.9916370908086	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTGATGTTAGAGT	NA	False	NA	-5	True	NA	NA	NA	70495350	70471215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUST00000212426.2	chr8	+	2604	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	269.284113147712	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGCTGTGTGAATACA	NA	False	NA	32	True	AATAAA	-45	NA	75836203	75854321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUST00000212432.2	chr1	+	665	3	FSM	ENSMUSG00000046330.11	ENSMUST00000212432.2	665	3	0	0	0	0	multi-exon	FALSE	canonical	2	15690	junction_1	1470.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACGGGTTATTTACG	NA	False	NA	-23	True	NA	NA	NA	72750472	72752755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_72750960_72751300_72751384_72752660
ENSMUST00000212433.2	chr8	+	1304	2	FSM	ENSMUSG00000054400.17	ENSMUST00000212433.2	1304	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAACACAGCTTAATT	4813	False	NA	NA	False	NA	NA	NA	104977513	104985006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_104977728_104983916
ENSMUST00000212448.2	chr8	-	1006	1	FSM	ENSMUSG00000110516.2	ENSMUST00000212448.2	1006	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAGAAAAAAATA	968	False	NA	NA	False	NA	NA	NA	95817304	95816298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_95816300_95817300
ENSMUST00000212451.2	chr8	-	4289	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212451.2	1931	19	0	-2358	0	-1083	multi-exon	FALSE	canonical	3	104	junction_6	54.8951019875382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGACAGGTTTTACTG	NA	False	NA	NA	False	NA	NA	NA	70495384	70469855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUST00000212457.2	chr6	-	2958	20	FSM	ENSMUSG00000041372.11	ENSMUST00000212457.2	2958	20	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	11.0924096230953	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGGGTGGGCCAGCCGCT	NA	False	NA	NA	False	AATGAA	-11	NA	120271520	120180770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_120180880_120183439_120183567_120184083_120184238_120185866_120185940_120186193_120186348_120187052_120187370_120191707_120192462_120193234_120193297_120193516_120193618_120194416_120194527_120195828_120195973_120199024_120199092_120199233_120199313_120200561_120200630_120201036_120201138_120201505_120201597_120202053_120202150_120208474_120208553_120209848_120209953_120271351
ENSMUST00000212478.2	chr8	-	3622	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_12	239.231916186412	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCACCTGTGTGGAAAT	NA	False	NA	-25	True	AATAAA	-16	NA	70449034	70361306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ENSMUST00000212479.2	chr3	+	3810	7	FSM	ENSMUSG00000036863.13	ENSMUST00000212479.2	3810	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	19.8445346520284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACGGCTTGTTTTATT	NA	False	NA	NA	False	AAAACA	-21	NA	145693891	145726054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145694925_145704217_145704866_145707077_145708169_145712770_145712898_145720012_145720195_145721350_145721583_145725557
ENSMUST00000212490.2	chr8	+	1115	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAACATGGTGGTGTGTCT	3328	False	NA	1	True	NA	NA	NA	123899583	123905504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123899783_123904588
ENSMUST00000212520.2	chr17	-	5216	12	FSM	ENSMUSG00000037326.11	ENSMUST00000212520.2	5216	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.7674920904847	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAGCTTGCATTCTGTT	1722	False	NA	-12	True	AATAAA	-15	NA	26204770	26177343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26192064_26192354_26204444
ENSMUST00000212524.2	chr8	+	4422	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	1	5522	0	1012	multi-exon	FALSE	canonical	3	100	junction_2	15.4209453522005	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATTAAAATAA	NA	False	NA	NA	False	AATAAA	-44	NA	107662382	107740824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ENSMUST00000212546.2	chr8	-	880	1	FSM	ENSMUSG00000110686.2	ENSMUST00000212546.2	880	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGTTTTTATATGAGAAA	NA	False	NA	NA	False	NA	NA	NA	106312832	106311952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106312000_106312800
ENSMUST00000212551.2	chr8	-	438	5	FSM	ENSMUSG00000031833.11	ENSMUST00000212551.2	438	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	14.0066948278314	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCAGCTCCACTGTATC	NA	False	NA	NA	False	NA	NA	NA	71245066	71241870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71241929_71242326_71242348_71242491_71242565_71242640_71242730_71244869
ENSMUST00000212571.2	chr8	+	2649	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_17	98.3685253625717	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACATGGTGATAT	NA	False	NA	8	True	AAGAAA	-13	NA	124100491	124130545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
ENSMUST00000212572.2	chr8	+	1151	3	FSM	ENSMUSG00000014859.10	ENSMUST00000212572.2	1151	3	0	0	0	0	multi-exon	FALSE	canonical	3	941	junction_2	62.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106030556	106032002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106030865_106031064_106031110_106031204
ENSMUST00000212590.2	chr8	-	3376	16	FSM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	26.4222128772995	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTTCAGTGTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	73175299	73131261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUST00000212592.2	chr19	-	3901	14	FSM	ENSMUSG00000025195.10	ENSMUST00000212592.2	3901	14	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_13	13.2052526755398	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGAGTGTGTTTCCTTC	NA	False	NA	-6	True	AATAAA	-14	NA	43868207	43835260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43868051
ENSMUST00000212603.2	chr8	+	2169	5	FSM	ENSMUSG00000056820.8	ENSMUST00000212603.2	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	23.7631542519086	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	5246	False	NA	NA	False	NA	NA	NA	125739787	125757160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506
ENSMUST00000212605.2	chr8	-	7439	3	FSM	ENSMUSG00000069895.5	ENSMUST00000212605.2	7439	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTGTTTGCGCCTTTT	NA	False	NA	-4	True	NA	NA	NA	110464354	110453086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_110460375_110461936_110461996_110464262
ENSMUST00000212611.2	chr8	-	2528	11	FSM	ENSMUSG00000002908.18	ENSMUST00000212611.2	2528	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.4446158378372	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACTGGAGTAAGATACAA	NA	False	NA	NA	False	NA	NA	NA	71315902	71296549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71297206_71299138_71299209_71299407_71299417_71300818_71300947_71301421_71301533_71303243_71303386_71305297_71305717_71307270_71307367_71307644_71308122_71314308_71314418_71315591
ENSMUST00000212634.2	chr8	+	1241	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212634.2	678	3	6	-569	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGTGGTCCTTCTGTGT	NA	False	NA	10	True	ATTAAA	-16	NA	106427785	106430124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106427919_106428805_106429029_106429239
ENSMUST00000212644.2	chr9	+	2085	3	FSM	ENSMUSG00000025898.7	ENSMUST00000212644.2	2085	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_2	20.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGTTT	9	True	NA	NA	False	NA	NA	NA	3404087	3413199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_3404191_3409965_3410077_3411328
ENSMUST00000212658.2	chr8	-	842	1	FSM	ENSMUSG00000038069.7	ENSMUST00000212658.2	842	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAAAGCATA	NA	False	NA	NA	False	NA	NA	NA	48166967	48166125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_48166100_48167000
ENSMUST00000212681.2	chr8	+	3001	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	2.49443825784929	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGACCCTTGTCCTGTA	7200	False	NA	27	True	AATAAA	-18	NA	69661689	69683188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
ENSMUST00000212683.2	chr18	-	3317	6	FSM	ENSMUSG00000044906.7	ENSMUST00000212683.2	3317	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	79.1722173492697	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGTTGTTACGTCTCC	NA	False	NA	-3	True	AATAAA	-17	NA	70605580	70585283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_70586460_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUST00000212684.2	chr8	-	1023	5	FSM	ENSMUSG00000031796.8	ENSMUST00000212684.2	1023	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	193.603977231874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGAAGAATTAGAGACGTCC	NA	False	NA	NA	False	NA	NA	NA	96161458	96147029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96161115
ENSMUST00000212686.2	chr8	-	554	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAGAAGGCTGTGTCT	NA	False	NA	-8	True	AATAAA	-19	NA	106663670	106662367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
ENSMUST00000212686.2-0	chr8	-	440	4	FSM	ENSMUSG00000031897.10	ENSMUST00000212686.2	554	4	106	8	93	0	multi-exon	FALSE	canonical	3	157	junction_3	46.7784375778224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACACTTAAACAGAAGG	NA	False	NA	-16	True	AATAAA	-11	NA	106663564	106662375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497
ENSMUST00000212697.2	chr8	+	396	3	FSM	ENSMUSG00000019261.4	ENSMUST00000212697.2	396	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACTTCCTCTTGTAGAC	NA	False	NA	NA	False	NA	NA	NA	71358625	71364634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71358772_71363588_71363694_71364489
ENSMUST00000212706.2	chr8	+	2860	4	FSM	ENSMUSG00000034807.10	ENSMUST00000212706.2	2860	4	0	0	0	0	multi-exon	FALSE	canonical	3	843	junction_1	70.0618774132314	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAAGTCTTTGGGTTTGGT	NA	False	NA	25	True	ATTAAA	-17	NA	72073326	72077550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72073499_72074407_72075475_72075733_72075941_72076136
ENSMUST00000212707.2	chr8	+	642	1	FSM	ENSMUSG00000110679.2	ENSMUST00000212707.2	642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCTTCAATAGTTCTC	NA	False	NA	NA	False	AATATA	-45	NA	94949620	94950262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94949600_94950300
ENSMUST00000212716.2	chr8	-	1568	6	FSM	ENSMUSG00000013155.11	ENSMUST00000212716.2	1568	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	9.8508882848198	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGTTCCATAGGAGC	NA	False	NA	-14	True	ATTAAA	-15	NA	106434777	106430282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180
ENSMUST00000212718.2	chr8	+	3113	15	FSM	ENSMUSG00000041438.9	ENSMUST00000212718.2	3113	15	0	0	0	0	multi-exon	FALSE	canonical	3	1116	junction_3	94.3690378573526	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	False	NA	11	True	AATAAA	-16	NA	107621220	107649719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107645438_107648803_107648915_107649496
ENSMUST00000212735.2	chr17	-	4922	10	FSM	ENSMUSG00000037326.11	ENSMUST00000212735.2	4922	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	25.1793566240283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCATTCTGTTGTCACC	1812	False	NA	-6	True	AATAAA	-21	NA	26204680	26177337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26178708_26178780_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ENSMUST00000212754.2	chr8	+	4863	5	FSM	ENSMUSG00000044676.11	ENSMUST00000212754.2	4863	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	6.21992765231236	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCTGAGACTTGCTTC	951	False	NA	NA	False	AATAAA	-16	NA	110806393	110819373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110806637_110809309_110809375_110810288_110810416_110810975_110811084_110815053
ENSMUST00000212766.2	chr8	+	2305	15	FSM	ENSMUSG00000010936.12	ENSMUST00000212766.2	2305	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	121.354031743524	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGGGTTAATTGCT	7370	False	NA	NA	False	NA	NA	NA	111345239	111437315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436953
ENSMUST00000212777.2	chr8	-	2161	13	FSM	ENSMUSG00000043251.7	ENSMUST00000212777.2	2161	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	8.1594355741613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTCTGAATCTATGTGT	NA	False	NA	-3	True	AATAAA	-13	NA	106022572	106016557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106022257_106022339_106022537
ENSMUST00000212789.2	chr17	-	4536	11	FSM	ENSMUSG00000037326.11	ENSMUST00000212789.2	4536	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	31.9751465985693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	1838	False	NA	-11	True	AATAAA	-16	NA	26204654	26177342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26178704_26178780_26178960_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
ENSMUST00000212790.2	chr8	+	2171	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	7.64489662745314	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGACCTGTGAGCTGTG	9607	False	NA	13	True	AATAAA	-25	NA	123502316	123544619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123502368_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
ENSMUST00000212811.2	chr8	+	2653	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_7	114.72564374774	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAGTAGTGCTGTGTGA	NA	False	NA	27	True	AATAAA	-40	NA	75836251	75854316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUST00000212813.2	chr8	-	849	2	FSM	ENSMUSG00000031835.17	ENSMUST00000212813.2	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTTTCCCTATTGGGA	8435	False	NA	NA	False	AATAAA	-17	NA	120285180	120273827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_120274625_120285128
ENSMUST00000212823.2	chr8	+	1911	1	FSM	ENSMUSG00000019261.4	ENSMUST00000212823.2	1911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAACAAAAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	71358887	71360798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71358900_71360800
ENSMUST00000212824.2	chr8	+	2928	23	FSM	ENSMUSG00000032939.15	ENSMUST00000212824.2	2928	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	328.081966678305	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGCAAGGAATCAAAGCC	NA	False	NA	NA	False	ATTAAA	-15	NA	94941228	95041694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_94941260_94947187_94947240_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUST00000212836.2	chr7	-	2716	19	FSM	ENSMUSG00000007783.11	ENSMUST00000212836.2	2716	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_18	22.8379287076197	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCACTGTGCTTTTCTGCGG	2740	False	NA	-1	True	AATAAA	-21	NA	44624199	44608795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624020
ENSMUST00000212843.2	chr8	-	1409	1	FSM	ENSMUSG00000033732.11	ENSMUST00000212843.2	1409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAAAAGGCACGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	111573359	111571950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111572000_111573400
ENSMUST00000212845.2	chr8	-	2818	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212845.2	2818	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	71.1967583184918	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTTTTTTTTTTTTTTT	NA	False	NA	-13	True	NA	NA	NA	70495345	70471291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476256_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUST00000212848.2	chr8	+	830	4	FSM	ENSMUSG00000031783.11	ENSMUST00000212848.2	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	1933	junction_1	22.5141930543577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCGGGTTTTATTAAGC	NA	False	NA	NA	False	NA	NA	NA	95588343	95590369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_95588468_95588809_95588862_95589148_95589513_95590079
ENSMUST00000212864.2	chr8	-	1250	1	FSM	ENSMUSG00000110469.2	ENSMUST00000212864.2	1250	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CCAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	AATAAA	-12	NA	76133217	76131967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_76132000_76133200
ENSMUST00000212922.2	chr8	-	3313	7	FSM	ENSMUSG00000014837.16	ENSMUST00000212922.2	3313	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	9.72396809720988	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCTTCTGTCTAC	NA	False	NA	-2	True	NA	NA	NA	106015682	106007040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400
ENSMUST00000212937.2	chr8	-	943	3	FSM	ENSMUSG00000035569.18	ENSMUST00000212937.2	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	70.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAAGTAAATTGTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	123769016	123658247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123658798_123701467_123701532_123768687
ENSMUST00000212938.2	chr8	-	646	3	FSM	ENSMUSG00000031897.10	ENSMUST00000212938.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAACACTTAAACAGAAGG	NA	False	NA	-16	True	AATAAA	-11	NA	106663659	106662375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106662538_106662627_106662780_106663327
ENSMUST00000212950.2	chr8	-	2620	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212950.2	2620	22	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	58.0603720511769	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTATCTAGTAGCCTC	NA	False	NA	NA	False	NA	NA	NA	73175282	73111911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUST00000212957.2	chr8	-	314	3	FSM	ENSMUSG00000110489.2	ENSMUST00000212957.2	153	3	0	-161	0	0	multi-exon	FALSE	canonical	3	213	junction_1	80.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAATAGTACTGGTATG	NA	False	NA	-4	True	TTTAAA	-1	NA	96544319	96535179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_96535388_96539088_96539129_96544253
ENSMUST00000212959.2	chr8	+	937	3	FSM	ENSMUSG00000031982.6	ENSMUST00000212959.2	937	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	1.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGGCTGCTGTTTGCT	NA	False	NA	NA	False	NA	NA	NA	125455141	125459167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_125455222_125457530_125457756_125458535
ENSMUST00000212963.2	chr8	+	2578	6	FSM	ENSMUSG00000031903.8	ENSMUST00000212963.2	2578	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	47.4088599314516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGGTGCCTTGTCCTGCTC	6197	False	NA	11	True	AATAAA	-17	NA	106877030	106891344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887840_106887941_106889456
ENSMUST00000212964.2	chr8	+	2033	8	FSM	ENSMUSG00000031728.11	ENSMUST00000212964.2	2033	8	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	5.70356136505061	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432177	110451564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110432496_110432988_110433052_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUST00000212967.2	chr8	+	2696	9	FSM	ENSMUSG00000006585.4	ENSMUST00000212967.2	2696	9	0	0	0	0	multi-exon	FALSE	canonical	3	858	junction_2	70.7626976238187	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACTGTCTCTGATCATG	2597	False	NA	NA	False	NA	NA	NA	123294764	123300293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ENSMUST00000212971.2	chr8	-	3972	24	FSM	ENSMUSG00000033703.10	ENSMUST00000212971.2	3972	24	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	26.4236961878319	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTTTTTTTGCTGGG	1214	False	NA	0	True	AATAAA	-26	NA	111629120	111609087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616471_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ENSMUST00000212973.2	chr8	-	3633	9	FSM	ENSMUSG00000031729.7	ENSMUST00000212973.2	3633	9	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_2	54.85990680816	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419892	110397960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_110399274_110402007_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUST00000212990.2	chr8	-	648	7	FSM	ENSMUSG00000031708.18	ENSMUST00000212990.2	648	7	0	0	0	0	multi-exon	FALSE	canonical	3	3555	junction_3	216.890461344482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTGTGTTCTTTAGG	NA	False	NA	-3	True	AATAAA	-15	NA	84299569	84298326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469
ENSMUST00000212991.2	chr8	-	3646	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_13	64.9317448394025	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGACACTTGATTTTT	NA	False	NA	-2	True	AATAAA	-31	NA	73229070	73214473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ENSMUST00000213005.2	chr8	+	1580	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	49.2958754190788	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	2149	False	NA	10	True	GATAAA	-11	NA	123951604	123958989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUST00000213019.2	chr8	+	4194	39	FSM	ENSMUSG00000050357.10	ENSMUST00000213019.2	4194	39	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_20	8.5824984578148	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTCTCCTCCTGCCGCA	NA	False	NA	NA	False	NA	NA	NA	106412905	106424775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ENSMUST00000213029.2	chr8	-	929	5	FSM	ENSMUSG00000006589.9	ENSMUST00000213029.2	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	493.303152229945	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTCTTCTCTCTCCTCC	NA	False	NA	NA	False	NA	NA	NA	123303592	123301654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123303361_123303491
ENSMUST00000213030.2	chr8	-	660	6	FSM	ENSMUSG00000006589.9	ENSMUST00000213030.2	660	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	634.519030447472	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGCTGGCTAGATGGT	NA	False	NA	NA	False	NA	NA	NA	123303557	123301626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123302992_123303253_123303361_123303491
ENSMUST00000213037.2	chr8	+	711	2	FSM	ENSMUSG00000031839.8	ENSMUST00000213037.2	711	2	0	0	0	0	multi-exon	FALSE	canonical	3	2011	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCGGGGGCCTGGGGGG	NA	False	NA	NA	False	TTTAAA	-4	NA	120071254	120072280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_120071360_120071674
ENSMUST00000213053.2	chr8	-	576	5	FSM	ENSMUSG00000045128.10	ENSMUST00000213053.2	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	13769.0618144447	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGAGACCCACTGAATA	NA	False	NA	-51	True	NA	NA	NA	71350039	71348058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71349976
ENSMUST00000213055.2	chr8	-	717	2	FSM	ENSMUSG00000038697.16	ENSMUST00000213055.2	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGCTGCAAGGAATTTG	3791	False	NA	NA	False	ACTAAA	-44	NA	124748050	124735978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_124736573_124747927
ENSMUST00000213058.2	chr6	+	11163	23	FSM	ENSMUSG00000063810.8	ENSMUST00000213058.2	11163	23	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	14.0492051479525	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGACTACTTTCTTCAG	NA	False	NA	NA	False	NA	NA	NA	85564627	85679620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85565009_85576826_85576953_85578180_85578374_85584453_85584575_85585967_85587515_85587799_85587919_85592229_85592390_85596415_85600184_85601565_85601700_85604900_85606697_85618300_85618531_85620139_85620266_85628244_85628401_85633376_85633512_85644848_85644939_85654537_85655692_85671815_85671934_85673074_85673279_85673557_85673800_85674294_85674449_85675139_85675204_85678653_85678754_85679575
ENSMUST00000213060.2	chr9	+	2897	5	FSM	ENSMUSG00000041624.11	ENSMUST00000213060.2	2897	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	5.59016994374947	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAGAAAGA	134	False	NA	NA	False	AATATA	-21	NA	3532887	3761177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635158_3759395
ENSMUST00000213062.2	chr8	-	560	3	FSM	ENSMUSG00000006589.9	ENSMUST00000213062.2	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	1410	junction_2	2	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCCTCAGTTTGT	NA	False	NA	-5	True	AATAAA	-17	NA	123302228	123301373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_123301767_123301875_123301955_123302140
ENSMUST00000213065.2	chr8	+	842	3	FSM	ENSMUSG00000095026.3	ENSMUST00000213065.2	842	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAAGTCTCACGATTCA	NA	False	NA	NA	False	CATAAA	-3	NA	71171191	71175283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71171282_71174425_71174587_71174692
ENSMUST00000213066.2	chr18	-	1569	4	FSM	ENSMUSG00000044906.7	ENSMUST00000213066.2	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	16.8193010820572	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70597221	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032
ENSMUST00000213080.2	chr8	-	860	1	FSM	ENSMUSG00000039067.6	ENSMUST00000213080.2	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108315090	108314230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_108314200_108315100
ENSMUST00000213100.2	chr8	+	384	3	FSM	ENSMUSG00000031808.8	ENSMUST00000213100.2	384	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	71	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCAGGCTGTGGCCCGGC	NA	False	NA	NA	False	NA	NA	NA	72022815	72032122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72022957_72023364_72023533_72032047
ENSMUST00000213179.2	chr9	+	1627	3	FSM	ENSMUSG00000042073.16	ENSMUST00000213179.2	1627	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGCTTTTGCTGTCTC	NA	False	NA	10	True	AATAAA	-17	NA	106326982	106330119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106327431_106328591_106328834_106329182
ENSMUST00000213208.2	chr9	-	3293	9	FSM	ENSMUSG00000032217.14	ENSMUST00000213208.2	3293	9	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_8	59.9895824289518	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTG	NA	False	NA	-13	True	AATAAA	-21	NA	70361240	70332705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782
ENSMUST00000213254.2	chr9	-	1961	14	FSM	ENSMUSG00000031996.18	ENSMUST00000213254.2	1961	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	388.472977744746	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTTGTCAAAGACGTT	8715	False	NA	NA	False	AAAAAG	-1	NA	31123111	31067485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUST00000213296.2	chr9	-	1868	15	FSM	ENSMUSG00000032198.10	ENSMUST00000213296.2	1868	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	50.5494807094989	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATTGCCTCTGTTCTCT	6275	False	NA	-6	True	NA	NA	NA	21763912	21748644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21748848_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ENSMUST00000213316.2	chr9	-	1454	3	FSM	ENSMUSG00000032180.12	ENSMUST00000213316.2	1454	3	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGGTGACTGGGCTTA	NA	False	NA	-3	True	AATAAA	-21	NA	21421483	21418848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21419688_21420226_21420648_21421289
ENSMUST00000213318.2	chr9	+	480	1	FSM	ENSMUSG00000074516.7	ENSMUST00000213318.2	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAAAGGCTCCTGCCAGT	28	False	NA	NA	False	NA	NA	NA	7751725	7752205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_7751700_7752200
ENSMUST00000213350.2	chr9	+	597	2	FSM	ENSMUSG00000057982.9	ENSMUST00000213350.2	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTACATGCTCAAGCTA	749	False	NA	NA	False	NA	NA	NA	22137018	22146802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22137129_22146315
ENSMUST00000213371.2	chr9	+	1766	5	FSM	ENSMUSG00000057982.9	ENSMUST00000213371.2	1766	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	49.3273504254992	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCTGGCCGGCCATGC	749	False	NA	34	True	NA	NA	NA	22137018	22150989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22137129_22146315_22146443_22147323_22147591_22148970_22149081_22149837
ENSMUST00000213373.2	chr7	+	3337	15	FSM	ENSMUSG00000005686.18	ENSMUST00000213373.2	3337	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	15.4927567012485	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGAACTTTAGCTTTAT	NA	False	NA	NA	False	NA	NA	NA	110368117	110411126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_110368140_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUST00000213380.2	chr9	-	2521	9	FSM	ENSMUSG00000042444.11	ENSMUST00000213380.2	2521	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.34305722818264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACACTAATACTTATAAC	NA	False	NA	NA	False	NA	NA	NA	70564433	70511829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_70512569_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ENSMUST00000213388.2	chr9	+	2344	9	FSM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9.53939201416946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGCTCATCCTTTCA	NA	False	NA	NA	False	AATAAA	-21	NA	44308395	44314265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUST00000213396.2	chr9	+	2518	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	11.7915223783869	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTGTGACTGTCTGCA	NA	False	NA	NA	False	AATAAA	-21	NA	65122426	65146506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ENSMUST00000213407.2	chr9	-	1047	3	FSM	ENSMUSG00000096472.3	ENSMUST00000213407.2	691	3	163	-519	64	0	multi-exon	FALSE	canonical	3	31	junction_2	102.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGTTTTGTGTGA	NA	False	NA	NA	False	TATAAA	-18	NA	21202540	21199761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21200629_21202104_21202262_21202517
ENSMUST00000213448.2	chr9	+	845	3	FSM	ENSMUSG00000048758.15	ENSMUST00000213448.2	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	3966	junction_1	565.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTCCCAAAGGTGCTC	NA	False	NA	NA	False	NA	NA	NA	106306753	106308587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106307214_106307506_106307572_106308267
ENSMUST00000213488.2	chr10	-	2325	3	FSM	ENSMUSG00000019838.12	ENSMUST00000213488.2	2325	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTGCTTCAGTTTTTCTT	7142	False	NA	NA	False	AATAAA	-27	NA	40018251	39951386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_39953014_39956658_39956804_40017698
ENSMUST00000213508.2	chr9	-	1780	4	FSM	ENSMUSG00000032026.8	ENSMUST00000213508.2	1780	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	526.615820330364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGATTCAGTTAAAGT	NA	False	NA	-15	True	AATAAA	-10	NA	48391915	48384790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_48386200_48386419_48386498_48390609_48390694_48391706
ENSMUST00000213518.2	chr9	+	3513	21	FSM	ENSMUSG00000032178.15	ENSMUST00000213518.2	3513	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	555.681284550776	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279233	21316657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315479_21315991
ENSMUST00000213525.2	chr9	-	2703	1	FSM	ENSMUSG00000042396.11	ENSMUST00000213525.2	2703	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	48406599	48403896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_48403900_48406600
ENSMUST00000213528.2	chr10	-	969	8	FSM	ENSMUSG00000000296.9	ENSMUST00000213528.2	969	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	226.139563192327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTCTGAATTCTTGT	NA	False	NA	55	True	AATAGA	-19	NA	31321851	31208622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_31208966_31214180_31214242_31217135_31217175_31219007_31219023_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUST00000213539.2	chr9	-	1441	7	FSM	ENSMUSG00000056167.9	ENSMUST00000213539.2	1441	7	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_4	26.6817665582072	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTGCAGTTTACTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	114469153	114454335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000213578.2	chr10	-	1121	1	FSM	ENSMUSG00000111313.2	ENSMUST00000213578.2	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGTCACATTTCTCCAAA	NA	False	NA	NA	False	NA	NA	NA	18212989	18211868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_18211900_18213000
ENSMUST00000213605.2	chr9	+	519	4	FSM	ENSMUSG00000001774.9	ENSMUST00000213605.2	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_1	89.2785901919753	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCGTGTATTTTCCTTTG	8546	False	NA	NA	False	TATAAA	-16	NA	18203601	18213578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321
ENSMUST00000213639.2	chr10	-	1165	6	FSM	ENSMUSG00000000296.9	ENSMUST00000213639.2	827	6	-58	-280	0	0	multi-exon	FALSE	canonical	3	30	junction_2	219.239230066154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31321851	31208372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_31208966_31214180_31214242_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUST00000213640.2	chr9	-	3117	4	FSM	ENSMUSG00000032067.7	ENSMUST00000213640.2	3117	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	19.3620476419435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCGTTTTCAGGATTTAT	7954	False	NA	NA	False	AATAAA	-17	NA	50439956	50432917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50433637_50433828_50433900_50436022_50438250_50439856
ENSMUST00000213647.2	chr9	-	4961	14	FSM	ENSMUSG00000032217.14	ENSMUST00000213647.2	4961	14	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_13	65.8687955321188	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTTGTGTTTCATAA	2593	False	NA	-19	True	AATAAA	-15	NA	70410660	70332711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221
ENSMUST00000213698.2	chr9	-	705	4	FSM	ENSMUSG00000040883.19	ENSMUST00000213698.2	705	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	109.004587059444	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGCTTCTTTGGAGAT	NA	False	NA	-23	True	NA	NA	NA	21838584	21832321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838476
ENSMUST00000213729.2	chr9	+	2517	2	FSM	ENSMUSG00000032279.12	ENSMUST00000213729.2	2517	2	0	0	0	0	multi-exon	FALSE	canonical	3	1656	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCAATTC	NA	False	NA	NA	False	NA	NA	NA	54493793	54499624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54493828_54497141
ENSMUST00000213747.2	chr9	-	935	4	FSM	ENSMUSG00000032112.11	ENSMUST00000213747.2	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_3	13.0213499897497	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCATTCAGTGAATATAA	1967	False	NA	53	True	NA	NA	NA	44318403	44314994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100
ENSMUST00000213760.2	chr9	+	596	4	FSM	ENSMUSG00000032399.9	ENSMUST00000213760.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	19599	junction_2	572.368956375363	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCCGAGAAGGTTGT	NA	False	NA	NA	False	AAAAAG	-28	NA	64084416	64085552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUST00000213763.2	chr9	+	1216	12	FSM	ENSMUSG00000031939.17	ENSMUST00000213763.2	1216	12	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_9	145.029663537447	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACCTTTTATAGTT	9118	False	NA	-1	True	NA	NA	NA	15217555	15228266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
ENSMUST00000213770.2	chr9	+	775	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_6	112.305634567263	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTTGGAAGTGTTTTC	NA	False	NA	30	True	AATAAA	-11	NA	26911005	26918626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ENSMUST00000213785.2	chr9	+	3305	4	FSM	ENSMUSG00000032383.8	ENSMUST00000213785.2	3305	4	0	0	0	0	multi-exon	FALSE	canonical	3	2090	junction_3	185.159990878759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGGGTGTGGGCTGTGT	1565	False	NA	16	True	AATAAA	-16	NA	65967503	65973905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65967683_65968748_65968863_65970270_65972954_65973576
ENSMUST00000213809.2	chr9	-	1883	9	FSM	ENSMUSG00000032182.16	ENSMUST00000213809.2	1883	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	29.6690073982936	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTCACGCCCATGGTG	6080	False	NA	-20	True	AATAAA	-13	NA	21504112	21499981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21504022
ENSMUST00000213815.2	chr9	-	1419	5	FSM	ENSMUSG00000001348.16	ENSMUST00000213815.2	1419	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	92.7425873048623	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCCAGAATGGGTGTGT	9074	False	NA	-30	True	AATAAA	-10	NA	22042949	22038033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042796
ENSMUST00000213874.2	chr9	+	4109	24	FSM	ENSMUSG00000032267.9	ENSMUST00000213874.2	4109	24	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_12	166.491369690667	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	False	NA	13	True	AATAAA	-19	NA	48896713	48953810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935280_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ENSMUST00000213913.2	chr9	+	831	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	320.421423891863	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCAATTTGACTTTTT	NA	False	NA	13	True	ATTAAA	-13	NA	14411942	14421661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUST00000213960.2	chr9	+	1737	6	FSM	ENSMUSG00000035594.11	ENSMUST00000213960.2	1737	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACTGGAAAATGCAACTA	NA	False	NA	NA	False	NA	NA	NA	54888816	54914109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54889006_54905295_54905448_54907735_54907781_54909683_54909794_54911614_54912444_54913697
ENSMUST00000213977.2	chr9	+	2317	5	FSM	ENSMUSG00000003299.11	ENSMUST00000213977.2	2317	5	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_4	55.0244263941025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914251	20920127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122
ENSMUST00000214037.2	chr9	+	3887	1	FSM	ENSMUSG00000111394.2	ENSMUST00000214037.2	3887	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGGCAGTGTTCATG	1788	False	NA	NA	False	NA	NA	NA	59580096	59583983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59580100_59584000
ENSMUST00000214058.2	chr9	-	2241	5	FSM	ENSMUSG00000032515.9	ENSMUST00000214058.2	2241	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.9268604418766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTATGTTTTTCTG	NA	False	NA	NA	False	NA	NA	NA	119812089	119801146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067_119806312_119811798
ENSMUST00000214072.2	chr9	-	1941	7	FSM	ENSMUSG00000032299.11	ENSMUST00000214072.2	1941	7	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_5	106.241470245851	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGGTCTTGCTTGCTTTT	6331	False	NA	0	True	AATAAA	-19	NA	57065561	57062318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350
ENSMUST00000214136.2	chr9	+	1570	8	FSM	ENSMUSG00000032279.12	ENSMUST00000214136.2	1570	8	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_2	68.917874817697	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54502377	54511220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUST00000214174.2	chr9	-	579	4	FSM	ENSMUSG00000032299.11	ENSMUST00000214174.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	505.386980441721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTATGGGTCTTGCTT	8385	False	NA	-6	True	AATAAA	-13	NA	57063507	57062324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57062565_57062695_57062873_57063185_57063296_57063455
ENSMUST00000214179.2	chr9	-	4163	6	FSM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	0	-3369	0	-2456	multi-exon	FALSE	canonical	3	18	junction_5	143.058869001541	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	9711	False	NA	-3	True	TATAAA	-21	NA	45896692	45876612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896599
ENSMUST00000214200.2	chr9	+	871	2	FSM	ENSMUSG00000032178.15	ENSMUST00000214200.2	871	2	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTAGCTGTGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	21314928	21316303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21315488_21315991
ENSMUST00000214208.2	chr9	+	1250	10	FSM	ENSMUSG00000023345.18	ENSMUST00000214208.2	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	93.1042161329356	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTCTGGGATTGGGT	31	False	NA	20	True	AATAAA	-32	NA	106160082	106227089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207099_106207216_106226880
ENSMUST00000214218.2	chr9	-	2983	3	FSM	ENSMUSG00000043895.7	ENSMUST00000214218.2	379	3	-72	-2532	0	2298	multi-exon	FALSE	canonical	0	0	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGGTTATGTGTGTGT	8094	False	NA	0	True	AATAAA	-20	NA	20888077	20877246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20879867_20886768_20886948_20887893
ENSMUST00000214256.2	chr9	-	3344	7	FSM	ENSMUSG00000040722.8	ENSMUST00000214256.2	1025	7	0	-2319	0	0	multi-exon	FALSE	canonical	3	62	junction_6	45.7262385167301	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375343	57348609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375098
ENSMUST00000214275.2	chr9	-	1284	14	FSM	ENSMUSG00000023262.14	ENSMUST00000214275.2	1284	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	137.635441630778	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315387	106310188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106314087_106314153_106314827_106314937_106315331
ENSMUST00000214285.2	chr9	-	1213	3	FSM	ENSMUSG00000032180.12	ENSMUST00000214285.2	1213	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	267.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGCCTGGTGACTGGG	NA	False	NA	-7	True	AATAAA	-17	NA	21421483	21418852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21419688_21420226_21420411_21421289
ENSMUST00000214298.2	chr9	+	2137	4	FSM	ENSMUSG00000042138.10	ENSMUST00000214298.2	423	4	-281	-1433	0	0	multi-exon	FALSE	canonical	3	84	junction_1	69.0909223817106	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	395	False	NA	NA	False	TTTAAA	-7	NA	37400614	37435446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
ENSMUST00000214354.2	chr9	+	4417	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	29.0464187886294	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTACTTTTCTGA	NA	False	NA	17	True	AATAAA	-18	NA	60701823	60787641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ENSMUST00000214361.2	chr9	+	5148	6	FSM	ENSMUSG00000025236.12	ENSMUST00000214361.2	5148	6	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_5	128.284059804794	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198865	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59220520_59221035_59221135_59222016
ENSMUST00000214391.2	chr10	-	2520	4	FSM	ENSMUSG00000019961.18	ENSMUST00000214391.2	2520	4	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	62.0698531226445	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAGTCTGAGAACTTGC	NA	False	NA	NA	False	AAAACA	-45	NA	91007386	90992960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUST00000214432.2	chr9	+	2077	12	FSM	ENSMUSG00000035024.17	ENSMUST00000214432.2	2077	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	64.5578733251372	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26985628	27006611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_26985761_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ENSMUST00000214454.2	chr9	-	4770	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_24	14.2647949512077	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGTTGCTTGCAT	NA	False	NA	-4	True	NA	NA	NA	21042539	21015365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ENSMUST00000214456.2	chr9	-	3207	2	FSM	ENSMUSG00000031931.5	ENSMUST00000214456.2	3207	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCAGTGTTTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	14695846	14691082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_14694259_14695815
ENSMUST00000214462.2	chr9	+	2624	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCCTGACTGCATATTT	NA	False	NA	NA	False	AAAAAG	-4	NA	119274052	119293305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ENSMUST00000214462.2-0	chr9	+	3929	7	FSM	ENSMUSG00000042787.16	ENSMUST00000214462.2	2624	7	-27	-1278	0	0	multi-exon	FALSE	canonical	2	5	junction_1	29.590257405662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGTGATTGGCCACAGTG	NA	False	NA	NA	False	NA	NA	NA	119274025	119294583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119274217_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ENSMUST00000214470.2	chr9	-	2706	15	FSM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_4	6.31163486696415	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTAGTCTCTTTACAA	8079	False	NA	NA	False	TATAAA	-25	NA	118917329	118900594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
ENSMUST00000214493.2	chr10	+	3525	4	FSM	ENSMUSG00000019845.9	ENSMUST00000214493.2	3525	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	3.55902608401044	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCAGGGTAGTTTTTG	NA	False	NA	-89	True	AATATA	-13	NA	39019139	39026093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_39021710_39023307_39023449_39023758_39023934_39025454
ENSMUST00000214547.2	chr9	-	5414	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAACATTGAAAAGACTT	NA	False	NA	-16	True	AATGAA	-1	NA	58943708	58783837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ENSMUST00000214547.2-0	chr9	-	7144	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	-16	-1714	0	-154	multi-exon	FALSE	canonical	3	72	junction_21	17.5900582969936	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	-7	True	AATACA	-13	NA	58943724	58782123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ENSMUST00000214555.2	chr10	-	2902	4	FSM	ENSMUSG00000063804.9	ENSMUST00000214555.2	2902	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.59991645768	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAAAATCTTGGATC	NA	False	NA	NA	False	AATAAA	-10	NA	45361873	45332678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_45335000_45345132_45345315_45352443_45352493_45361523
ENSMUST00000214571.2	chr9	+	2113	8	FSM	ENSMUSG00000032294.18	ENSMUST00000214571.2	2113	8	0	0	0	0	multi-exon	FALSE	canonical	3	15664	junction_5	1465.84232245004	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTGAAAGAAAAAAAAGC	1872	False	NA	NA	False	NA	NA	NA	59563858	59580242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203
ENSMUST00000214576.2	chr9	-	1278	4	FSM	ENSMUSG00000032180.12	ENSMUST00000214576.2	1013	4	47	-312	0	0	multi-exon	FALSE	canonical	3	33	junction_2	250.551835399827	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCCTGGTGACTGGGCT	NA	False	NA	-5	True	AATAAA	-19	NA	21421483	21418850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21419688_21420226_21420411_21420584_21420648_21421289
ENSMUST00000214585.2	chr9	+	2350	5	FSM	ENSMUSG00000047412.17	ENSMUST00000214585.2	2350	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	129.588531514174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGCTAAGAGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	30964602	30980887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_30965610_30973336_30973422_30975528_30975639_30977954_30978256_30980040
ENSMUST00000214604.2	chr9	-	2183	2	FSM	ENSMUSG00000032436.18	ENSMUST00000214604.2	2183	2	0	0	0	0	multi-exon	FALSE	canonical	3	1444	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	114610924	114590466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114592461_114610735
ENSMUST00000214640.2	chr9	-	703	7	FSM	ENSMUSG00000032299.11	ENSMUST00000214640.2	703	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	493.360725590876	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTATAGGCAAGAAGA	7469	False	NA	-43	True	AAGAAA	-13	NA	57064423	57062361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064033_57064043_57064350
ENSMUST00000214644.2	chr10	-	1103	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	42.7346463656832	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTGGATCTTTTATTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31321850	31208372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUST00000214659.2	chr10	+	5720	12	FSM	ENSMUSG00000038481.14	ENSMUST00000214659.2	3814	12	-189	-1717	0	0	multi-exon	FALSE	canonical	1	1	junction_4	10.2900095976953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCGTGGGTTATTTTA	NA	False	NA	8	True	AATAAA	-16	NA	40225332	40359814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ENSMUST00000214741.2	chr9	+	1107	5	FSM	ENSMUSG00000025785.6	ENSMUST00000214741.2	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_1	78.9600373606801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGTTGTTAGCATCT	5431	False	NA	13	True	AATAAA	-18	NA	122956509	122965192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ENSMUST00000214811.2	chr10	+	555	1	FSM	ENSMUSG00000110841.2	ENSMUST00000214811.2	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCCTACAAGTGTGTGC	NA	False	NA	NA	False	NA	NA	NA	45751386	45751941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_45751400_45751900
ENSMUST00000214828.2	chr8	-	3301	23	FSM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	114.790718661872	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGGTCAGTTTGGTCGT	NA	False	NA	-9	True	ATTAAA	-15	NA	125448717	125398071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUST00000214845.2	chr9	-	461	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCCCTATGAGTACT	NA	False	NA	NA	False	NA	NA	NA	124044769	124032987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
ENSMUST00000214845.2-0	chr9	-	374	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	0	87	0	-87	multi-exon	FALSE	canonical	3	27	junction_1	43.70608907489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCAGACTTTCTCCGT	NA	False	NA	NA	False	NA	NA	NA	124044769	124033074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
ENSMUST00000214864.2	chr9	-	1662	5	FSM	ENSMUSG00000032175.12	ENSMUST00000214864.2	1662	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	20.5106679559687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTTACTCTGTT	NA	False	NA	NA	False	NA	NA	NA	21042539	21034754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ENSMUST00000214882.2	chr9	-	1633	1	FSM	ENSMUSG00000031931.5	ENSMUST00000214882.2	1633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAAGGATGAT	NA	False	NA	NA	False	AGTAAA	-6	NA	14695794	14694161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_14694200_14695800
ENSMUST00000214896.2	chr10	-	1968	4	FSM	ENSMUSG00000038876.13	ENSMUST00000214896.2	781	4	21	-1208	0	0	multi-exon	FALSE	canonical	3	10	junction_3	95.3601360923712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAATTTGTTTGAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	29238022	29222171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237979
ENSMUST00000214923.2	chr9	-	1867	6	FSM	ENSMUSG00000042396.11	ENSMUST00000214923.2	1867	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	182.483314305719	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAGAGAATGTGTCTC	NA	False	NA	-12	True	ATTAAA	-4	NA	48406594	48400008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48405582_48405688_48406454
ENSMUST00000214979.2	chr9	-	416	2	FSM	ENSMUSG00000031931.5	ENSMUST00000214979.2	416	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTGTGGACTTTTCT	NA	False	NA	NA	False	AGTAAA	-42	NA	14695818	14694125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_14694259_14695535
ENSMUST00000215007.2	chr9	-	1980	3	FSM	ENSMUSG00000038412.9	ENSMUST00000215007.2	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	2040	junction_2	90	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGATGTCTTGTTTTT	NA	False	NA	-3	True	ATTAAA	-13	NA	121686678	121677628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_121679389_121681556_121681676_121686577
ENSMUST00000215050.2	chr9	+	2050	8	FSM	ENSMUSG00000032123.6	ENSMUST00000215050.2	2050	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	96.7247303919104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGATCACAGTGCTCC	3802	False	NA	NA	False	AATAAA	-26	NA	44238169	44245191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44238503_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUST00000215060.2	chr9	-	4184	6	FSM	ENSMUSG00000003131.8	ENSMUST00000215060.2	714	6	0	-3470	0	-2456	multi-exon	FALSE	canonical	3	7	junction_5	147.373539008874	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTGATGTCTGTTTCTT	4139	False	NA	-3	True	TATAAA	-21	NA	45896122	45876612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890022_45896002
ENSMUST00000215063.2	chr9	+	570	2	FSM	ENSMUSG00000025794.10	ENSMUST00000215063.2	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	15430	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGTGTGGACTCTAAG	737	False	NA	19	True	AATAAA	-23	NA	120402654	120403501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_120402884_120403160
ENSMUST00000215071.2	chr11	+	2719	3	FSM	ENSMUSG00000107677.3	ENSMUST00000215071.2	2719	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATCAGTGTGCACAG	3147	False	NA	NA	False	NA	NA	NA	58643559	58650497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_58644171_58647616_58647657_58648429
ENSMUST00000215088.2	chr6	-	1484	3	FSM	ENSMUSG00000032641.19	ENSMUST00000215088.2	1484	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGTGAGAATTGATTTA	NA	False	NA	-23	True	ATTAAA	-12	NA	134864748	134846124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_134847407_134863853_134863900_134864592
ENSMUST00000215093.2	chr1	-	9274	9	FSM	ENSMUSG00000016200.15	ENSMUST00000215093.2	9274	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	6.65206734782504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACGTTTCTTCACATTT	128	False	NA	NA	False	AATAAA	-18	NA	192718083	192573540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_192579929_192584059_192584250_192612785_192613236_192615421_192615694_192662653_192662870_192665827_192667220_192669025_192669191_192709277_192709326_192717930
ENSMUST00000215151.2	chr9	-	129	1	FSM	ENSMUSG00000111228.2	ENSMUST00000215151.2	129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	602	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGACAGCTACAGTGTAC	NA	False	NA	NA	False	NA	NA	NA	75427784	75427655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_75427700_75427800
ENSMUST00000215233.2	chr9	-	2363	12	FSM	ENSMUSG00000032316.9	ENSMUST00000215233.2	2363	12	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_9	49.1934955049954	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	9814	False	NA	-11	True	AATAAA	-19	NA	57672397	57657993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUST00000215267.2	chr9	-	4999	33	FSM	ENSMUSG00000052698.16	ENSMUST00000215267.2	4999	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_31	22.8196050579321	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGGAGTCACAGAGGT	NA	False	NA	-8	True	AATAAA	-21	NA	67234946	67128192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67232066_67232239_67234869
ENSMUST00000215269.2	chr9	+	1700	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	23.7276210354093	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTCTTCCCTGATGAG	NA	False	NA	NA	False	AATAAA	-18	NA	56325927	56397609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ENSMUST00000215288.2	chr7	-	2465	12	FSM	ENSMUSG00000036864.17	ENSMUST00000215288.2	2465	12	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_11	10.5595517059866	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCCAGTTTACTGTT	NA	False	NA	-6	True	AATAAA	-16	NA	30251692	30238558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30239008_30239173_30239256_30239343_30240263_30240345_30240522_30242911_30243040_30243115_30243199_30245549_30245651_30245727_30245853_30248465_30248634_30249031_30249129_30250182_30250260_30251632
ENSMUST00000215307.2	chr9	+	3776	19	FSM	ENSMUSG00000032512.8	ENSMUST00000215307.2	3776	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	68.0088955692063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCTGGACATGTT	NA	False	NA	30	True	AATAAA	-18	NA	119723971	119755653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745858_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUST00000215385.2	chr9	-	1860	2	FSM	ENSMUSG00000111831.2	ENSMUST00000215385.2	790	2	458	-1528	458	1528	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCTTTTATCAGCGTG	NA	False	NA	NA	False	NA	NA	NA	120579751	120571127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_120572855_120579618
ENSMUST00000215405.2	chr19	-	7114	3	FSM	ENSMUSG00000057503.7	ENSMUST00000215405.2	7114	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	13126913	13115384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_13122293_13126606_13126679_13126779
ENSMUST00000215420.2	chr9	+	2128	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	8.7740740252177	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAACAGTCAGTGGCTCA	NA	False	NA	NA	False	AATAAA	-13	NA	44308148	44314257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUST00000215452.2	chr9	-	344	2	FSM	ENSMUSG00000032330.8	ENSMUST00000215452.2	344	2	0	0	0	0	multi-exon	FALSE	canonical	3	5621	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATTGTGTGTGTGATT	NA	False	NA	NA	False	NA	NA	NA	79666992	79665588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_79665862_79666921
ENSMUST00000215474.2	chr9	+	4947	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	7.87400787401181	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37524965	37560951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ENSMUST00000215500.2	chr9	-	770	3	FSM	ENSMUSG00000032299.11	ENSMUST00000215500.2	770	3	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_2	158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCAGCCTGCTTCAT	7760	False	NA	NA	False	NA	NA	NA	57064132	57062830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57062873_57063185_57063840_57064058
ENSMUST00000215501.2	chr9	-	2895	3	FSM	ENSMUSG00000032405.11	ENSMUST00000215501.2	2895	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	45.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAAAAGTACCAAGTGA	2251	False	NA	NA	False	AGTAAA	-39	NA	62794669	62785768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_62788546_62792053_62792092_62794589
ENSMUST00000215510.2	chr7	+	4697	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_12	65.7666231799216	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGAATGAATCTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	111622712	111709690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUST00000215568.2	chr9	+	728	2	FSM	ENSMUSG00000032518.7	ENSMUST00000215568.2	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	2998	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGCTGACAGAGGCAC	NA	False	NA	NA	False	NA	NA	NA	119957871	119959440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119958343_119959183
ENSMUST00000215573.2	chr9	+	1292	1	FSM	ENSMUSG00000006932.18	ENSMUST00000215573.2	1292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120788281	120789573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_120788300_120789600
ENSMUST00000215574.2	chr9	+	3428	22	FSM	ENSMUSG00000057193.9	ENSMUST00000215574.2	3428	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	59.9503573923786	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGTATGCTTAAT	6621	False	NA	18	True	AATAAA	-18	NA	21232034	21266323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259186_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUST00000215618.2	chr9	+	1313	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGACAGACTAAATAATGC	778	False	NA	NA	False	NA	NA	NA	22137047	22150739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ENSMUST00000215618.2-1	chr9	+	5224	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	0	-3911	0	0	multi-exon	FALSE	canonical	3	112	junction_4	21.3717102731625	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTTGTGTTTTG	778	False	NA	14	True	NA	NA	NA	22137047	22154650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ENSMUST00000215619.2	chr9	-	1423	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGACTTCAGATTTAGG	NA	False	NA	NA	False	ATTAAA	-12	NA	21202604	21199705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21200629_21202104
ENSMUST00000215620.2	chr9	+	3189	12	FSM	ENSMUSG00000033590.9	ENSMUST00000215620.2	3189	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	7.22140985754018	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGATGCACCATTTTTTTC	1717	False	NA	8	True	AATAAA	-18	NA	75195112	75212733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_75195425_75196174_75196239_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ENSMUST00000215631.2	chr9	-	872	4	FSM	ENSMUSG00000079677.3	ENSMUST00000215631.2	681	4	-16	-175	0	0	multi-exon	FALSE	canonical	3	225	junction_3	51.1881062574327	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCGACATGTTTTGTGT	NA	False	NA	-7	True	AATAAA	-12	NA	20984818	20978815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20979222_20979325_20979414_20984370_20984615_20984684
ENSMUST00000215683.2	chr9	+	2421	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTTGCCTTCTTAATA	-21	True	NA	NA	False	AGTAAA	-20	NA	7184519	7208205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ENSMUST00000215683.2-0	chr9	+	1225	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	31	1165	0	0	multi-exon	FALSE	canonical	3	895	junction_7	57.310824564343	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	10	True	NA	24	True	AATAAA	-32	NA	7184550	7207040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ENSMUST00000215716.2	chr7	+	2205	10	FSM	ENSMUSG00000030967.16	ENSMUST00000215716.2	2205	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	32.7870043511295	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACAAACCTAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	132549896	132585680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ENSMUST00000215734.2	chr9	-	3070	6	FSM	ENSMUSG00000040722.8	ENSMUST00000215734.2	675	6	-23	-2372	0	0	multi-exon	FALSE	canonical	3	101	junction_3	25.4715527598927	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375343	57348609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
ENSMUST00000215746.2	chr9	+	3175	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	23.1622537763491	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAAAAAGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	119231509	119264061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ENSMUST00000215746.2-0	chr9	+	2021	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	-326	1480	0	0	multi-exon	TRUE	canonical	3	128	junction_3	23.1622537763491	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	119231183	119262581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ENSMUST00000215767.2	chr9	+	1204	1	FSM	ENSMUSG00000002820.7	ENSMUST00000215767.2	1204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCCAACAGTCAGAATA	8647	False	NA	NA	False	NA	NA	NA	21176601	21177805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21176600_21177800
ENSMUST00000215784.2	chr9	-	8330	59	FSM	ENSMUSG00000052698.16	ENSMUST00000215784.2	8330	59	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_57	20.3298600699497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGAGTCACAGAGGTCT	NA	False	NA	-6	True	AATAAA	-23	NA	67446897	67128190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67446613_67446686_67446859
ENSMUST00000215799.2	chr9	-	531	4	FSM	ENSMUSG00000039163.11	ENSMUST00000215799.2	531	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	87.2021916136414	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGAGTTCTGATTTAT	NA	False	NA	-7	True	AATAAA	-13	NA	117979231	117894162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979135
ENSMUST00000215817.2	chr8	-	4518	24	FSM	ENSMUSG00000058301.9	ENSMUST00000215817.2	4518	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	119.404999372875	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805861	70784174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ENSMUST00000215822.2	chr9	+	3134	18	FSM	ENSMUSG00000035769.10	ENSMUST00000215822.2	3134	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	17.3265002945415	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCACCTCTCCTTGCT	NA	False	NA	20	True	AATAAA	-20	NA	119186634	119222395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_119186774_119188297_119188381_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ENSMUST00000215848.2	chr9	-	4712	15	FSM	ENSMUSG00000032217.14	ENSMUST00000215848.2	4712	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	91.6561898774826	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTGTTTCATAAT	2617	False	NA	-18	True	AATAAA	-16	NA	70410636	70332710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410513
ENSMUST00000215875.2	chr9	+	2105	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	3.38230690505755	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAAGGGGTATCTTGTC	375	False	NA	1	True	NA	NA	NA	75221417	75253153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUST00000215966.2	chr9	+	2316	2	FSM	ENSMUSG00000032526.12	ENSMUST00000215966.2	2316	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGACCTGCGAGGACCTGA	NA	False	NA	9	True	AATAAA	-22	NA	121539411	121541894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121539538_121539704
ENSMUST00000215973.2	chr9	-	1111	1	FSM	ENSMUSG00000111269.2	ENSMUST00000215973.2	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATCCCTCAACAAACCA	NA	False	NA	NA	False	NA	NA	NA	101636062	101634951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_101635000_101636100
ENSMUST00000215980.2	chr9	-	676	4	FSM	ENSMUSG00000074397.6	ENSMUST00000215980.2	676	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.9234278833282	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGCAAGCCATCAGCCCAG	9335	False	NA	NA	False	NA	NA	NA	44352312	44346851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44346950_44347155_44347400_44347500_44347576_44352053
ENSMUST00000215999.2	chr9	-	1895	6	FSM	ENSMUSG00000032172.9	ENSMUST00000215999.2	1895	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.92574776766556	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCTGGGTTGTTTTGTA	NA	False	NA	-3	True	AATAAA	-18	NA	20657645	20578988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20580081_20582995_20583103_20583430_20583651_20583922_20584070_20586869_20587020_20657466
ENSMUST00000216011.2	chr7	-	4814	13	FSM	ENSMUSG00000030850.18	ENSMUST00000216011.2	1680	13	-69	-3065	0	0	multi-exon	FALSE	canonical	3	14	junction_6	69.1801191737112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCGGCCGTGGTTCT	NA	False	NA	-15	True	AATAAA	-16	NA	130121260	129993222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUST00000216057.2	chr9	-	627	4	FSM	ENSMUSG00000074476.7	ENSMUST00000216057.2	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	994.029174622154	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCGTTCATTGATTTAT	NA	False	NA	-22	True	ATTAAA	-12	NA	21671599	21667399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21667592_21668585_21668691_21668980_21669126_21671414
ENSMUST00000216063.2	chr9	-	6189	7	FSM	ENSMUSG00000047036.9	ENSMUST00000216063.2	6189	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	50.4669859082813	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTATACAGAAGTTC	NA	False	NA	6	True	AATAAA	-35	NA	122695071	122677974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691325_122694978
ENSMUST00000216095.2	chr9	-	3857	12	FSM	ENSMUSG00000032316.9	ENSMUST00000216095.2	3924	12	-18	85	0	0	multi-exon	FALSE	canonical	3	243	junction_11	42.6560334546315	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGTACCAGTGTGTC	9807	False	NA	-9	True	AATAAA	-21	NA	57672404	57657991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57668324_57668998_57669151_57672356
ENSMUST00000216127.2	chr10	+	399	1	FSM	ENSMUSG00000111356.2	ENSMUST00000216127.2	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACGGCTTATGTGCATGT	NA	False	NA	NA	False	AAGAAA	-6	NA	20084235	20084634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_20084200_20084600
ENSMUST00000216133.2	chr9	-	729	4	FSM	ENSMUSG00000070319.7	ENSMUST00000216133.2	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	2505	junction_2	92.9743094742963	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACATTCATCACTAGCAA	5180	False	NA	NA	False	NA	NA	NA	20809878	20807435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20807517_20809002_20809063_20809183_20809273_20809379
ENSMUST00000216281.2	chr9	-	1791	15	FSM	ENSMUSG00000032534.19	ENSMUST00000216281.2	1791	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	44.4853220461651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCACAGCCACAGACGG	NA	False	NA	NA	False	NA	NA	NA	102503180	102464052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102498894_102498928_102500754_102500793_102503102
ENSMUST00000216313.2	chr11	-	1304	12	FSM	ENSMUSG00000018593.14	ENSMUST00000216313.2	1304	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	267.658904683178	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGTAAGAAAGAAACTAG	3431	False	NA	NA	False	AATACA	-28	NA	55311151	55286246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613_55310682_55310904_55311027_55311123
ENSMUST00000216329.2	chr9	-	1559	3	FSM	ENSMUSG00000051705.14	ENSMUST00000216329.2	1559	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGGTGTGTGGTGCA	6440	False	NA	-22	True	AATAAA	-15	NA	59657910	59643752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_59645152_59657544_59657655_59657860
ENSMUST00000216344.2	chr9	+	2228	18	FSM	ENSMUSG00000003402.15	ENSMUST00000216344.2	2228	18	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_1	191.361611709314	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914101	21925518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUST00000216351.2	chr9	+	2484	23	FSM	ENSMUSG00000025237.17	ENSMUST00000216351.2	2484	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	14.9016056597828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCTGTGGACTGGATA	NA	False	NA	11	True	AATAAA	-5	NA	59524643	59557550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538053_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ENSMUST00000216365.2	chr9	-	1665	7	FSM	ENSMUSG00000063849.7	ENSMUST00000216365.2	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	15.2059929706094	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347390	57321243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57322010_57322368_57322756_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ENSMUST00000216372.2	chr9	-	2679	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	58.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTTGTTCTTGTCA	NA	False	NA	NA	False	NA	NA	NA	14696152	14690913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_14692908_14693910_14694259_14695815
ENSMUST00000216436.2	chr9	-	2498	6	FSM	ENSMUSG00000003308.16	ENSMUST00000216436.2	2498	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.84981202978	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGGGGGGACAGGCAA	NA	False	NA	NA	False	NA	NA	NA	21150657	21141695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145358_21148366_21149053_21150371
ENSMUST00000216438.2	chr9	-	1370	1	FSM	ENSMUSG00000058492.6	ENSMUST00000216438.2	1370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	123137034	123135664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_123135700_123137000
ENSMUST00000216501.2	chr10	-	4441	3	FSM	ENSMUSG00000019961.18	ENSMUST00000216501.2	4441	3	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_2	36.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTTGTGTGGTCTCC	NA	False	NA	-20	True	AATAAA	-14	NA	91007430	90996280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_91000064_91001804_91001932_91006899
ENSMUST00000216508.2	chr9	-	5333	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	6.83852557930183	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGTGTGGTGGTGCC	NA	False	NA	-2	True	NA	NA	NA	44216968	44203736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
ENSMUST00000216511.2	chr9	-	2257	2	FSM	ENSMUSG00000053128.16	ENSMUST00000216511.2	2257	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTGTGGTCCTTGGGAG	9293	False	NA	NA	False	AATAAA	-16	NA	44024770	44022081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44023981_44024412
ENSMUST00000216515.2	chr9	+	1685	2	FSM	ENSMUSG00000042195.10	ENSMUST00000216515.2	1685	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAGAATCACAATGT	NA	False	NA	39	True	ATTAAA	-15	NA	53718000	53725438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_53718314_53724066
ENSMUST00000216543.2	chr10	+	456	2	FSM	ENSMUSG00000045886.8	ENSMUST00000216543.2	456	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCGGTGGTCATGGTGT	NA	False	NA	NA	False	AATAAA	-45	NA	43400101	43400641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_43400172_43400255
ENSMUST00000216558.2	chr9	+	1623	16	FSM	ENSMUSG00000009741.16	ENSMUST00000216558.2	1623	16	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_8	65.0003076915794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTAAACGGACTGAACT	2022	False	NA	NA	False	NA	NA	NA	113760721	113804451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ENSMUST00000216594.2	chr9	+	1841	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAGTTGAGGCTG	9565	False	NA	NA	False	NA	NA	NA	64188884	64212706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUST00000216594.2-0	chr9	+	1205	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	4	632	0	0	multi-exon	FALSE	canonical	3	410	junction_1	719.77354715471	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUST00000216609.2	chr9	-	2079	1	FSM	ENSMUSG00000111128.2	ENSMUST00000216609.2	2079	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATCTCAATGCCAAGTC	7642	False	NA	NA	False	NA	NA	NA	45771980	45769901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_45769900_45772000
ENSMUST00000216649.2	chr9	+	3157	6	FSM	ENSMUSG00000047412.17	ENSMUST00000216649.2	3157	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	111.276951791465	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAACTTTTGTGTAAT	NA	False	NA	32	True	ATTAAA	-35	NA	30941939	30981529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
ENSMUST00000216649.2-0	chr9	+	9056	6	FSM	ENSMUSG00000047412.17	ENSMUST00000216649.2	3157	6	-247	-5652	-247	0	multi-exon	FALSE	canonical	3	75	junction_3	111.276951791465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCTGTTGTTGTCATTG	NA	False	NA	83	True	ATTAAA	-28	NA	30941692	30987181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
ENSMUST00000216656.2	chr10	+	2476	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTTTAGACTCTTCAGT	NA	False	NA	NA	False	AATAAA	-16	NA	41326430	41329464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_41326527_41327084
ENSMUST00000216677.2	chr9	+	5149	35	FSM	ENSMUSG00000035024.17	ENSMUST00000216677.2	5149	35	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	21.5907395566265	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACCTAGCATTTATTATAA	NA	False	NA	NA	False	AATAAA	-16	NA	26941944	27006608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ENSMUST00000216701.2	chr10	-	378	3	FSM	ENSMUSG00000111149.2	ENSMUST00000216701.2	378	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTACAACATGTCTCTA	NA	False	NA	NA	False	TTTAAA	-20	NA	34109527	34106902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_34107071_34107314_34107400_34109402
ENSMUST00000216704.2	chr9	+	2882	1	FSM	ENSMUSG00000111681.2	ENSMUST00000216704.2	2882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAACAAACCAAAA	NA	False	NA	NA	False	AAAACA	-25	NA	37180582	37183464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37180600_37183500
ENSMUST00000216717.2	chr9	-	2987	13	FSM	ENSMUSG00000032254.11	ENSMUST00000216717.2	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	34.4781533083713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGTTCTAAGTAAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	61844058	61830132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944
ENSMUST00000216785.2	chr9	-	1723	10	FSM	ENSMUSG00000056167.9	ENSMUST00000216785.2	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_3	40.9103204703612	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGAATCTAAGACCTCA	NA	False	NA	NA	False	NA	NA	NA	114469252	114446595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUST00000216816.2	chr9	+	3755	21	FSM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	63.2220491600834	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	17	True	AATAAA	-18	NA	70450035	70499516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUST00000216841.2	chr9	+	1426	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	88.2161549830869	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCGTGTCCAGTGCT	NA	False	NA	14	True	AATATA	-15	NA	57818316	57837249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57818455_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUST00000216867.2	chr9	+	577	4	FSM	ENSMUSG00000009927.10	ENSMUST00000216867.2	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	11233	junction_1	829.827692958002	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGGGTGCATCTGT	NA	False	NA	89	True	AATAAA	-14	NA	44318993	44321486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250
ENSMUST00000216877.2	chr9	+	2236	8	FSM	ENSMUSG00000032333.7	ENSMUST00000216877.2	2236	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	134.059079269902	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160474	58169803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_58160683_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUST00000216891.2	chr9	+	3997	14	FSM	ENSMUSG00000009741.16	ENSMUST00000216891.2	3997	14	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_6	61.6247471999328	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1997	False	NA	23	True	AATAAA	-23	NA	113760696	113806270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ENSMUST00000216892.2	chr9	+	3684	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_18	377.751077487821	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTCCGTACTTGAGT	NA	False	NA	23	True	AATACA	-12	NA	21279250	21313090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ENSMUST00000216921.2	chr9	-	1877	4	FSM	ENSMUSG00000031996.18	ENSMUST00000216921.2	1877	4	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_2	69.5621225156974	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACCTTGTGTTCCTGAC	NA	False	NA	-11	True	AATAAA	-17	NA	31064941	31060854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709
ENSMUST00000216925.2	chr9	+	1319	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216925.2	1319	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	82.3315856764583	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818261	57837251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57818291_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUST00000216993.2	chr10	-	695	3	FSM	ENSMUSG00000075232.7	ENSMUST00000216993.2	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_2	12.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTGTTTTGTAATAT	NA	False	NA	NA	False	GGGGCT	-6	NA	40178053	40170004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40170304_40170712_40170800_40177744
ENSMUST00000217034.2	chr9	+	2813	14	FSM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	-4	3220	0	-3220	multi-exon	FALSE	canonical	3	13	junction_1	7.66070431047592	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATATTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	44516188	44548808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44516250_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ENSMUST00000217081.2	chr9	+	862	4	FSM	ENSMUSG00000048758.15	ENSMUST00000217081.2	466	4	0	-396	0	0	multi-exon	FALSE	canonical	3	58	junction_1	2158.78427721613	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTCTGTTGTCATAG	NA	False	NA	3	True	AATAAA	-19	NA	106306760	106308767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106307013_106307168_106307214_106307506_106307572_106308267
ENSMUST00000217092.2	chr9	+	2472	5	FSM	ENSMUSG00000047412.17	ENSMUST00000217092.2	2472	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	111.676709747378	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGCTAAGAGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	30964534	30980887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
ENSMUST00000217150.2	chr9	-	951	4	FSM	ENSMUSG00000079677.3	ENSMUST00000217150.2	951	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	55.4276304943863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCGACATGTTTTGTG	NA	False	NA	-8	True	AATAAA	-11	NA	20984910	20978816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559
ENSMUST00000217157.2	chr7	-	3530	22	FSM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	415.436617026521	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	AAAACA	-35	NA	28661765	28593079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28593813_28593925_28594085_28594545_28594606_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUST00000217176.2	chr9	-	3111	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	167.860448931548	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATATTTCTAAGATGCTG	8302	False	NA	NA	False	CATAAA	-25	NA	95393938	95343457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ENSMUST00000217238.3	chr9	-	1747	4	FSM	ENSMUSG00000034303.9	ENSMUST00000217238.3	1747	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.92160768674447	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTCAGGTAATAATCTA	NA	False	NA	NA	False	AATAAA	-13	NA	37259653	37252830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_37253918_37255179_37255330_37259033_37259220_37259329
ENSMUST00000217278.2	chr8	+	1726	6	FSM	ENSMUSG00000039328.12	ENSMUST00000217278.2	1726	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.55527776692624	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATTAAATTTAATAACA	NA	False	NA	-23	True	TTTAAA	-1	NA	31601857	31619661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_31602201_31608458_31608616_31614879_31614926_31615193_31615236_31618279_31618363_31618606
ENSMUST00000217314.2	chr9	-	2162	13	FSM	ENSMUSG00000032312.8	ENSMUST00000217314.2	2162	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	31.3823862487649	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	-26	True	AATAAA	-22	NA	57541350	57533929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277
ENSMUST00000217340.2	chr10	-	365	2	FSM	ENSMUSG00000069682.7	ENSMUST00000217340.2	365	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAAAAAAAAATCAATAG	NA	False	NA	-10	True	AATAAA	-19	NA	29575277	29574743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_29575071_29575239
ENSMUST00000217344.2	chr10	+	782	1	FSM	ENSMUSG00000110841.2	ENSMUST00000217344.2	782	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2299	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGATACACAAAATG	NA	False	NA	NA	False	AATAAA	-34	NA	45751400	45752182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_45751400_45752200
ENSMUST00000217371.2	chr9	+	3183	14	FSM	ENSMUSG00000032394.7	ENSMUST00000217371.2	3183	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	14.1668000921899	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGAAAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65048493	65093154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65048836_65051537_65051844_65084676_65084822_65085147_65085279_65085657_65085796_65087322_65087482_65088417_65088584_65088806_65089055_65089237_65089403_65089983_65090176_65090281_65090387_65091054_65091194_65091314_65091523_65092415
ENSMUST00000217381.2	chr9	+	1789	8	FSM	ENSMUSG00000066705.8	ENSMUST00000217381.2	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	116.890320124361	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	368	False	NA	22	True	AATAAA	-26	NA	45281482	45307457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_45281787_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
ENSMUST00000217382.2	chr9	-	1696	3	FSM	ENSMUSG00000074476.7	ENSMUST00000217382.2	1696	3	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_2	208.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTTTTGTCTGCATGTGT	NA	False	NA	0	True	NA	NA	NA	21671578	21667303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21668691_21668980_21669126_21671414
ENSMUST00000217444.4	chr9	+	4816	8	FSM	ENSMUSG00000079084.13	ENSMUST00000217444.4	4816	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	11.4944529656523	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGTGTATTCTGTATCT	NA	False	NA	NA	False	AATAAA	-20	NA	13246535	13292867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_13246677_13251695_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700
ENSMUST00000217537.2	chr10	-	2526	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATAGTTGATGGTTGCA	8586	False	NA	-31	True	AATAAA	-15	NA	40133667	40123698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ENSMUST00000217537.2-0	chr10	-	710	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	-5	1821	0	0	multi-exon	FALSE	canonical	3	403	junction_5	105.423716496811	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTCTTGTATGCAATT	8581	False	NA	-16	True	AAAACA	-21	NA	40133672	40125519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ENSMUST00000217570.2	chr9	+	2484	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_6	121.65205391699	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGTCTAATTGATTT	NA	False	NA	18	True	ATTAAA	-19	NA	59198840	59223482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
ENSMUST00000217610.2	chr9	-	2413	3	FSM	ENSMUSG00000066235.8	ENSMUST00000217610.2	2413	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTTTCTGATGCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	121825079	121810671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_121812890_121813165_121813223_121824941
ENSMUST00000217624.2	chr9	+	1965	2	FSM	ENSMUSG00000066607.6	ENSMUST00000217624.2	1095	2	-870	0	-511	0	multi-exon	FALSE	canonical	3	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTATGTGCACATGGCC	NA	False	NA	NA	False	AGTAAA	-26	NA	58395374	58397768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_58396523_58396951
ENSMUST00000217629.2	chr10	-	986	1	FSM	ENSMUSG00000110896.2	ENSMUST00000217629.2	986	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCACCAAGGAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	50210845	50209859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_50209900_50210800
ENSMUST00000217641.2	chr9	-	3462	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_10	230.67090554872	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8743	False	NA	-9	True	AATAAA	-19	NA	31123083	31060852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUST00000217647.2	chr9	-	4370	33	FSM	ENSMUSG00000034007.11	ENSMUST00000217647.2	4370	33	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	14.3608626133669	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTAGCTAATTCTGT	NA	False	NA	NA	False	AATAAA	-1	NA	55845394	55458050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771669_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ENSMUST00000217672.2	chr12	+	5431	18	FSM	ENSMUSG00000020640.11	ENSMUST00000217672.2	5431	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	20.8623765263035	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTATTGTGTATTTCTTT	NA	False	NA	18	True	ATTAAA	-19	NA	4684775	4729506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4726210
ENSMUST00000217678.2	chr10	+	2212	10	FSM	ENSMUSG00000006731.11	ENSMUST00000217678.2	2212	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	17.4384278371675	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTACTTGTGTCTCTGTG	356	False	NA	8	True	GGGGCT	-23	NA	127001095	127008199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
ENSMUST00000217682.2	chr10	-	725	2	FSM	ENSMUSG00000025403.6	ENSMUST00000217682.2	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGAAGGGAGACCCCATTG	NA	False	NA	NA	False	NA	NA	NA	127358233	127356336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127356985_127358156
ENSMUST00000217685.2	chr10	-	666	3	FSM	ENSMUSG00000025353.6	ENSMUST00000217685.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	430	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGTATATTTTTCTTAA	NA	False	NA	-63	True	NA	NA	NA	128657460	128654420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128654885_128655822_128655975_128657410
ENSMUST00000217692.2	chr10	+	2557	2	FSM	ENSMUSG00000025410.11	ENSMUST00000217692.2	2557	2	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAAAAATATTCTTTA	9197	False	NA	NA	False	AATAAA	-18	NA	127102236	127105672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127102404_127103282
ENSMUST00000217715.2	chr10	+	412	1	FSM	ENSMUSG00000112702.2	ENSMUST00000217715.2	412	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGGTCTCAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	47516218	47516630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_47516200_47516600
ENSMUST00000217733.2	chr10	-	1668	5	FSM	ENSMUSG00000090841.3	ENSMUST00000217733.2	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	2189	junction_2	245.142305610435	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8245	False	NA	-5	True	AATAAA	-20	NA	128329723	128326729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000217745.2	chr10	+	4133	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATGACTTTTGGAGCCC	4016	False	NA	NA	False	GATAAA	-30	NA	128641422	128655128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUST00000217745.2-0	chr10	+	2997	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	29	1107	0	649	multi-exon	FALSE	canonical	3	291	junction_3	32.4242707448191	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTCCTTCTCTTCTTT	4045	False	NA	NA	False	TATAAA	-18	NA	128641451	128654021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUST00000217753.2	chr10	-	3875	9	FSM	ENSMUSG00000019861.16	ENSMUST00000217753.2	3875	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	57.8325978579555	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAAATATTTTGGTTTA	NA	False	NA	-35	True	AATAAA	-18	NA	52257814	52213155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52233437_52233462_52234868_52235034_52257706
ENSMUST00000217777.2	chr10	-	455	5	FSM	ENSMUSG00000062981.6	ENSMUST00000217777.2	455	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1680.921826707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAAATAAAAATACCC	NA	False	NA	-37	True	NA	NA	NA	95337789	95316695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95316840_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ENSMUST00000217781.2	chr10	-	646	3	FSM	ENSMUSG00000035215.10	ENSMUST00000217781.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	4365	junction_1	93.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCTTCCTTCTATGGG	NA	False	NA	NA	False	NA	NA	NA	80690857	80688766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80688935_80689591_80689664_80690451
ENSMUST00000217785.2	chr10	+	1836	1	FSM	ENSMUSG00000053830.5	ENSMUST00000217785.2	1836	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGACAGAAGGGAAACTT	NA	False	NA	NA	False	NA	NA	NA	72145150	72146986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_72145200_72147000
ENSMUST00000217809.2	chr10	-	1115	3	FSM	ENSMUSG00000045867.11	ENSMUST00000217809.2	1115	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	28	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTCTTTCAATGAGAG	NA	False	NA	2	True	AATAAA	-22	NA	95159427	95011126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95011841_95158447_95158752_95159330
ENSMUST00000217820.2	chr12	+	2332	6	FSM	ENSMUSG00000035133.10	ENSMUST00000217820.2	2332	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	127.8320773515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGGCTCCTAAGAGTTT	NA	False	NA	5	True	AGTAAA	-16	NA	52551124	52615618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_52551171_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUST00000217824.2	chr10	-	576	3	FSM	ENSMUSG00000061032.10	ENSMUST00000217824.2	576	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	482.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCTTTCTCTTAAGTAC	NA	False	NA	NA	False	NA	NA	NA	78248824	78246531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78246854_78247237_78247321_78248653
ENSMUST00000217838.2	chr10	-	9341	42	FSM	ENSMUSG00000001151.11	ENSMUST00000217838.2	9341	42	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_22	52.6752139792264	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGGCTACAGCCATTC	NA	False	NA	-16	True	AATAAA	-18	NA	76278620	76187096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239457_76239479_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ENSMUST00000217842.2	chr10	+	5014	33	FSM	ENSMUSG00000034560.7	ENSMUST00000217842.2	5014	33	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_5	77.5305383381284	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAGTGGAGATACAGT	NA	False	NA	NA	False	NA	NA	NA	83379615	83431298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391864_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUST00000217843.2	chr10	-	1641	12	FSM	ENSMUSG00000020130.10	ENSMUST00000217843.2	1641	12	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_10	40.9353451107822	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTTTGTAGTTACTT	NA	False	NA	-2	True	ATTAAA	-21	NA	115057613	115035300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487
ENSMUST00000217874.2	chr10	+	329	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217874.2	329	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTCTCTTTTTAAATTT	NA	False	NA	NA	False	AATAAA	-13	NA	126906349	126906970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_126906494_126906785
ENSMUST00000217876.2	chr10	-	2156	15	FSM	ENSMUSG00000035673.11	ENSMUST00000217876.2	2156	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	37.9085903785645	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGGGTCTCCATTCCTC	5655	False	NA	0	True	AATAAA	-21	NA	79911273	79898249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79911061
ENSMUST00000217881.2	chr10	+	567	1	FSM	ENSMUSG00000112490.2	ENSMUST00000217881.2	567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGCACAAAATAAATGAAG	NA	False	NA	NA	False	AAGAAA	-36	NA	14462679	14463246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_14462700_14463200
ENSMUST00000217884.2	chr10	-	2799	7	FSM	ENSMUSG00000069520.7	ENSMUST00000217884.2	2799	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	78.0590944235342	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198406	115176646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115198291
ENSMUST00000217885.2	chr4	-	1982	16	FSM	ENSMUSG00000078485.5	ENSMUST00000217885.2	1982	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	4.43721634461166	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCAGGTCAAGGTTGT	NA	False	NA	-10	True	ATTAAA	-16	NA	156312984	156306122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_156306340_156306424_156306474_156306707_156306936_156307096_156307238_156307397_156307539_156307754_156307896_156308022_156308172_156308313_156308390_156308994_156309076_156309181_156309296_156309373_156309499_156309651_156309725_156309804_156309886_156309982_156310130_156312673_156312774_156312865
ENSMUST00000217887.2	chr10	-	3084	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	16.3291151015602	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198152	115176646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
ENSMUST00000217889.2	chr12	+	2155	6	FSM	ENSMUSG00000048833.10	ENSMUST00000217889.2	2155	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	11.4647285183732	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACTGACTCTTCTGGTT	NA	False	NA	NA	False	AATAAA	-12	NA	80691283	80725128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905
ENSMUST00000217895.2	chr10	-	3996	28	FSM	ENSMUSG00000074657.6	ENSMUST00000217895.2	3996	28	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	6.98675996544999	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTGTCCATCGGTCT	NA	False	NA	-7	True	ATTAAA	-18	NA	127098949	127064918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
ENSMUST00000217905.2	chr10	+	860	3	FSM	ENSMUSG00000019894.15	ENSMUST00000217905.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	28.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCATTGGGGTTTGGAAT	NA	False	NA	NA	False	NA	NA	NA	103203692	103229344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_103204015_103224757_103225203_103229251
ENSMUST00000217908.2	chr10	+	1350	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTCATTTACTTACAGC	NA	False	NA	-11	True	NA	NA	NA	111309102	111331980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUST00000217908.2-0	chr10	+	2130	15	FSM	ENSMUSG00000058799.17	ENSMUST00000217908.2	1350	15	-15	-765	0	0	multi-exon	FALSE	canonical	3	980	junction_10	363.653962004586	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309087	111332745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUST00000217931.2	chr10	+	4186	7	FSM	ENSMUSG00000040021.14	ENSMUST00000217931.2	4186	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	35.6230262611138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTAACCTAGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	7567010	7589350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ENSMUST00000217969.2	chr10	-	608	6	FSM	ENSMUSG00000090841.3	ENSMUST00000217969.2	608	6	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_4	956.330152196405	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGGTTCTTTCTTTCT	8242	False	NA	-7	True	AATAAA	-18	NA	128329726	128326731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328579_128329407_128329436_128329677
ENSMUST00000217974.2	chr12	-	2314	3	FSM	ENSMUSG00000043673.12	ENSMUST00000217974.2	2314	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	27	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGTTTCTATGTTCT	3324	False	NA	1	True	AATAAA	-21	NA	11201057	11140737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_11142757_11169759_11169950_11200952
ENSMUST00000218004.2	chr10	-	6005	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_24	166.742560845221	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462237	121423284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ENSMUST00000218022.2	chr12	+	5272	26	FSM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	127.798754297528	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAATTAAGGTCATGCTT	4536	False	NA	NA	False	AATAAA	-17	NA	11316105	11369780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUST00000218022.2-0	chr12	+	3740	26	FSM	ENSMUSG00000020608.8	ENSMUST00000218022.2	5272	26	0	1532	0	204	multi-exon	FALSE	canonical	3	71	junction_3	127.798754297528	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4536	False	NA	15	True	AATAAA	-16	NA	11316105	11368248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUST00000218024.2	chr10	+	1699	1	FSM	ENSMUSG00000112714.2	ENSMUST00000218024.2	1699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTTGCTTTTGGAGGT	NA	False	NA	NA	False	NA	NA	NA	71540119	71541818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_71540100_71541800
ENSMUST00000218036.2	chr10	-	772	3	FSM	ENSMUSG00000035278.10	ENSMUST00000218036.2	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	1230	junction_2	7.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80633722	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80632357_80632424_80632657_80633606
ENSMUST00000218043.2	chr10	+	735	3	FSM	ENSMUSG00000019857.8	ENSMUST00000218043.2	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_2	53	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTTGAGGCTCAAGCT	1824	False	NA	NA	False	NA	NA	NA	53473350	53482779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_53473395_53478443_53478560_53482204
ENSMUST00000218055.2	chr10	-	2180	11	FSM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	16.213882940246	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	False	NA	-1	True	AATAAA	-20	NA	33827255	33795137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ENSMUST00000218059.2	chr10	-	655	4	FSM	ENSMUSG00000034024.9	ENSMUST00000218059.2	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	2205	junction_3	65.9140854951858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAGTGCCTGACGCTTC	NA	False	NA	NA	False	NA	NA	NA	116899280	116897409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116897487_116897929_116898042_116898721_116898788_116898880
ENSMUST00000218067.2	chr10	+	4517	6	FSM	ENSMUSG00000035370.10	ENSMUST00000218067.2	4517	6	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_4	45.0271029492238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80441854	80451618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUST00000218082.2	chr10	+	483	2	FSM	ENSMUSG00000020250.12	ENSMUST00000218082.2	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCAGGCATTTCTTTCT	NA	False	NA	NA	False	NA	NA	NA	82695077	82696783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_82695135_82696357
ENSMUST00000218087.2	chr10	-	5959	5	FSM	ENSMUSG00000079685.11	ENSMUST00000218087.2	5959	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.9098374141623	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTTCTCTTACTT	NA	False	NA	-1	True	ATTAAA	-16	NA	7423361	7390361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7423253
ENSMUST00000218095.2	chr10	+	1622	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	95.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTATGTGTATGAGT	NA	False	NA	1	True	AGTAAA	-10	NA	86521388	86525818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_86521473_86521743_86521861_86524397
ENSMUST00000218110.2	chr12	+	642	2	FSM	ENSMUSG00000021048.8	ENSMUST00000218110.2	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAGTTCACTGTAGCT	8093	False	NA	NA	False	NA	NA	NA	76302253	76317768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76302319_76317191
ENSMUST00000218127.2	chr10	-	691	7	FSM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	1160.32375750142	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	8242	False	NA	-5	True	AATAAA	-20	NA	128329726	128326729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUST00000218139.2	chr10	+	2235	1	FSM	ENSMUSG00000052291.9	ENSMUST00000218139.2	2235	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCGCACCGAAAACTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	116417185	116419420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_116417200_116419400
ENSMUST00000218142.2	chr10	-	474	4	FSM	ENSMUSG00000061983.8	ENSMUST00000218142.2	474	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	1924.28809346903	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTTTGCTGGTATAA	NA	False	NA	-3	True	AATAAA	-28	NA	23662700	23661080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662522
ENSMUST00000218163.2	chr11	+	3824	27	FSM	ENSMUSG00000055805.16	ENSMUST00000218163.2	3824	27	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	7.11320132824136	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTCGGCTCGGTGCCT	5048	False	NA	23	True	AATAAA	-16	NA	103061932	103089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084273_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
ENSMUST00000218171.2	chr10	-	1051	4	FSM	ENSMUSG00000019917.11	ENSMUST00000218171.2	1051	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	9.67241208569794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATCAGCTGGATCTCCTG	NA	False	NA	NA	False	NA	NA	NA	59014679	59001861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582
ENSMUST00000218208.2	chr10	-	1964	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_11	105.465203223192	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCCTCTCTGCTTCCTGT	4772	False	NA	-13	True	AATAAA	-15	NA	80896012	80879910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ENSMUST00000218215.2	chr10	+	2331	14	FSM	ENSMUSG00000032763.12	ENSMUST00000218215.2	2331	14	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	17.1491887433841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACAGAATCTGTGTATA	5894	False	NA	20	True	AATAAA	-29	NA	78410828	78420326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711
ENSMUST00000218267.2	chr10	-	600	2	FSM	ENSMUSG00000033307.8	ENSMUST00000218267.2	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	12818	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGAGCCTCGCTCCA	NA	False	NA	-107	True	NA	NA	NA	75696026	75695283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_75695378_75695520
ENSMUST00000218280.2	chr10	+	2245	4	FSM	ENSMUSG00000020087.6	ENSMUST00000218280.2	512	4	-1196	-537	0	0	multi-exon	FALSE	canonical	0	0	junction_2	128.489515352637	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTTGGCTGCTTTT	NA	False	NA	21	True	AATAAA	-24	NA	61531292	61538552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61532522_61534076_61534208_61535262_61535408_61537812
ENSMUST00000218305.2	chr12	+	2389	5	FSM	ENSMUSG00000037669.16	ENSMUST00000218305.2	1587	5	14	-816	0	0	multi-exon	FALSE	canonical	2	7	junction_2	100.260909630823	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258149	8335759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_8258205_8270599_8270756_8318363_8318599_8325807_8325891_8333899
ENSMUST00000218311.2	chr14	+	1201	15	FSM	ENSMUSG00000112858.3	ENSMUST00000218311.2	1201	15	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	4.37525509460387	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAACTGTGTGTGT	NA	False	NA	1	True	ATTAAA	-5	NA	55051597	55091552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55051743_55053942_55054044_55056993_55057047_55057594_55057670_55075569_55075686_55076681_55076743_55077723_55077753_55079339_55079387_55079595_55079639_55079805_55079867_55080243_55080293_55086123_55086164_55086751_55086847_55087992_55088055_55091328
ENSMUST00000218315.2	chr10	+	4379	26	FSM	ENSMUSG00000005682.10	ENSMUST00000218315.2	4379	26	0	0	0	0	multi-exon	FALSE	canonical	2	164	junction_12	40.3480061465248	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTAGTGTGGGATTCTTT	NA	False	NA	15	True	AATAAA	-24	NA	128139242	128157222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUST00000218321.2	chr12	-	724	3	FSM	ENSMUSG00000021028.9	ENSMUST00000218321.2	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	16.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTGACAACTGCTATAAT	NA	False	NA	NA	False	TTTAAA	-2	NA	56392620	56386948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_56387389_56389020_56389141_56392456
ENSMUST00000218335.2	chr12	+	661	2	FSM	ENSMUSG00000112392.2	ENSMUST00000218335.2	661	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTTCATCTACCCCC	NA	False	NA	NA	False	NA	NA	NA	77600120	77616483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_77600570_77616271
ENSMUST00000218372.2	chr10	-	2375	16	FSM	ENSMUSG00000020076.8	ENSMUST00000218372.2	2375	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	82.1345779126483	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTCCAGTGTGAGCTT	9571	False	NA	NA	False	CATAAA	-28	NA	62485532	62452004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62485397
ENSMUST00000218392.2	chr10	+	858	3	FSM	ENSMUSG00000112400.2	ENSMUST00000218392.2	858	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	58.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTGGAAGTGGGTAGG	NA	False	NA	NA	False	NA	NA	NA	95729304	95733119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_95729528_95730062_95730152_95732573
ENSMUST00000218414.2	chr10	-	788	6	FSM	ENSMUSG00000032977.10	ENSMUST00000218414.2	788	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	97.4117036089607	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCTGTGGCTTTACTTC	NA	False	NA	-3	True	AATAAA	-35	NA	77351406	77323998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351325
ENSMUST00000218428.2	chr12	+	3610	3	FSM	ENSMUSG00000035933.6	ENSMUST00000218428.2	3610	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTGCAAGCCAAGTAAG	NA	False	NA	11	True	AATAAA	-17	NA	31969671	31979068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_31969777_31970552_31970633_31975643
ENSMUST00000218526.2	chr5	-	4938	27	FSM	ENSMUSG00000055204.16	ENSMUST00000218526.2	4938	27	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	46.8370586093063	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACCAATTGATGTTAAA	NA	False	NA	NA	False	NA	NA	NA	90514044	90401051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_90401063_90401573_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ENSMUST00000218532.2	chr10	-	3025	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	21.5303403492735	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGGGCTGGCTTGCAA	NA	False	NA	NA	False	NA	NA	NA	67972456	67932283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ENSMUST00000218552.2	chr10	-	2214	4	FSM	ENSMUSG00000020074.8	ENSMUST00000218552.2	2214	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_2	18.9091394715771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTAATTTCCAAGATA	1500	False	NA	-1	True	GATAAA	-30	NA	62600815	62588953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62589193_62592261_62592454_62595872_62596059_62599218
ENSMUST00000218576.2	chr10	-	3092	28	FSM	ENSMUSG00000052798.14	ENSMUST00000218576.2	3092	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	174.862046350179	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGAGTTTTCTCTTATG	NA	False	NA	-4	True	AATAAA	-29	NA	117628569	117586525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610494_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUST00000218582.2	chr10	+	2795	10	FSM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	48.9166587797331	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGACTTCTATTTGGC	NA	False	NA	8	True	AATAAA	-18	NA	52109732	52197474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_52109932_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ENSMUST00000218585.2	chr10	-	2989	9	FSM	ENSMUSG00000039089.16	ENSMUST00000218585.2	2989	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	11.6182776262233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTTTTTATATATGTA	NA	False	NA	-11	True	AATAAA	-12	NA	26190028	26150368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26189933
ENSMUST00000218627.2	chr10	+	4808	3	FSM	ENSMUSG00000049764.9	ENSMUST00000218627.2	378	3	0	-4430	0	-416	multi-exon	FALSE	canonical	3	22	junction_2	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTCTGTCTTTTTT	NA	False	NA	13	True	AATAAA	-15	NA	75868483	75878652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75868584_75868786_75868910_75874067
ENSMUST00000218654.2	chr10	-	2475	15	FSM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	9.18628080901302	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6184	False	NA	-4	True	AATAAA	-15	NA	127024641	127018394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
ENSMUST00000218660.2	chr10	+	3848	1	FSM	ENSMUSG00000112667.2	ENSMUST00000218660.2	3848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCTAGGATACCCAAG	NA	False	NA	NA	False	NA	NA	NA	50131770	50135618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_50131800_50135600
ENSMUST00000218717.2	chr10	-	383	2	FSM	ENSMUSG00000079685.11	ENSMUST00000218717.2	383	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGATCTGTGAAAAAGAG	NA	False	NA	NA	False	GATAAA	-44	NA	7423587	7407052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7407102_7423253
ENSMUST00000218737.2	chr10	+	1855	3	FSM	ENSMUSG00000112132.2	ENSMUST00000218737.2	1855	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCGGCCTCTGGCTGTGT	5694	False	NA	NA	False	NA	NA	NA	53285977	53300368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_53286053_53297604_53297685_53298668
ENSMUST00000218766.2	chr10	+	4725	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	14.4858551697855	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAGTAACAAGATGGAT	NA	False	NA	NA	False	AATAAA	-13	NA	75047904	75146897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ENSMUST00000218770.2	chr10	-	1408	8	FSM	ENSMUSG00000035890.10	ENSMUST00000218770.2	1408	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	460.29023674288	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCATGGCTTGGCGTC	NA	False	NA	-7	True	AATACA	-16	NA	79602775	79594375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602709
ENSMUST00000218784.2	chr10	+	2287	2	FSM	ENSMUSG00000112319.2	ENSMUST00000218784.2	2287	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTTTGAGTTTATTTT	1688	False	NA	NA	False	NA	NA	NA	103348788	103407546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_103350045_103406515
ENSMUST00000218785.2	chr10	+	948	6	FSM	ENSMUSG00000019977.17	ENSMUST00000218785.2	948	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	524.818216147268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATCTCATGGACTTTGT	NA	False	NA	NA	False	AATAAA	-13	NA	21171928	21213075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865
ENSMUST00000218789.2	chr10	+	3151	11	FSM	ENSMUSG00000035206.11	ENSMUST00000218789.2	3151	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7.13021738799036	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	2166	False	NA	11	True	ATTAAA	-19	NA	80698572	80704542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
ENSMUST00000218828.2	chr10	+	3934	14	FSM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_9	377.08137963032	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGATATTTGAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	111316477	111334011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUST00000218831.2	chr10	-	843	1	FSM	ENSMUSG00000020132.11	ENSMUST00000218831.2	843	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACCCGTCGTTGGAGG	NA	False	NA	-8	True	AGTAAA	-10	NA	115151499	115150656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115150700_115151500
ENSMUST00000218838.2	chr10	-	628	2	FSM	ENSMUSG00000112082.2	ENSMUST00000218838.2	628	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTCATCTTCTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	99296092	99288515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_99289098_99296046
ENSMUST00000218842.2	chr10	-	4970	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATTTTTGTCATCCCT	2368	False	NA	NA	False	ATTAAA	-13	NA	115220340	115204308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115208852_115212256_115212453_115220109
ENSMUST00000218842.2-0	chr10	-	2510	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	-75	2535	-67	-1467	multi-exon	FALSE	canonical	3	8	junction_1	6.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAATGTGTGTCTCTGT	2293	False	NA	NA	False	AATAAA	-13	NA	115220415	115206843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115208852_115212256_115212453_115220109
ENSMUST00000218879.2	chr12	+	2139	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	274	1229	274	-413	multi-exon	FALSE	canonical	3	179	junction_11	270.209005524736	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCGTTAACTTTCTTTA	NA	False	NA	NA	False	AATAAA	-20	NA	55277226	55309392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
ENSMUST00000218885.2	chr10	+	2233	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	19.815990244945	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCAAGGACTCAGTCACA	5893	False	NA	7	True	AATAAA	-16	NA	78410827	78420313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUST00000218893.2	chr10	-	661	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	2875	junction_5	503.887924046608	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCAAGTGTGTATTTCA	NA	False	NA	-11	True	AATAAA	-14	NA	95337802	95316669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ENSMUST00000218903.2	chr10	+	4115	18	FSM	ENSMUSG00000019978.17	ENSMUST00000218903.2	4115	18	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	40.1674694938122	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTGTCACTTCTCT	NA	False	NA	NA	False	AATAAA	-14	NA	25235753	25399411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ENSMUST00000218930.2	chr12	-	1382	3	FSM	ENSMUSG00000021051.11	ENSMUST00000218930.2	1382	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	10	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTTCTCTTTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	75643002	75561948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_75562573_75639942_75640107_75642408
ENSMUST00000218931.2	chr10	-	785	2	FSM	ENSMUSG00000035215.10	ENSMUST00000218931.2	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	4552	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACTCTCCTCAGGTA	NA	False	NA	NA	False	NA	NA	NA	80691027	80689454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80689664_80690451
ENSMUST00000218934.2	chr12	-	1441	12	FSM	ENSMUSG00000005656.10	ENSMUST00000218934.2	1441	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	317.445589793493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTCTGAATATTTT	NA	False	NA	-26	True	GATAAA	-2	NA	54842267	54793434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830799_54830905_54842238
ENSMUST00000218964.2	chr10	+	979	5	FSM	ENSMUSG00000020307.16	ENSMUST00000218964.2	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_4	778.055749930556	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGAGAGAATCACCT	NA	False	NA	17	True	AATAAA	-17	NA	79518307	79524228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523686
ENSMUST00000218968.2	chr10	+	483	2	FSM	ENSMUSG00000020088.11	ENSMUST00000218968.2	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	1281	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGTTTGGACAGTGAAAA	NA	False	NA	-19	True	NA	NA	NA	61525315	61527177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61525685_61527063
ENSMUST00000218978.2	chr10	-	1833	4	FSM	ENSMUSG00000020067.9	ENSMUST00000218978.2	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	3.29983164553722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAACAAAAAACAAAACG	NA	False	NA	NA	False	TTTAAA	-2	NA	62958463	62952055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62952806_62954199_62954334_62955807_62955974_62957680
ENSMUST00000218990.2	chr10	-	914	2	FSM	ENSMUSG00000004356.9	ENSMUST00000218990.2	914	2	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGAAATTAAGTTAA	64	False	NA	-96	True	NA	NA	NA	88583693	88582563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_88582922_88583137
ENSMUST00000218996.2	chr10	-	3277	4	FSM	ENSMUSG00000062981.6	ENSMUST00000218996.2	3277	4	0	0	0	0	multi-exon	FALSE	canonical	3	2875	junction_3	616.352712873616	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAATAAGTACCTT	NA	False	NA	NA	False	ATTAAA	-41	NA	95337801	95326538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95329578_95332685_95332750_95336244_95336385_95337767
ENSMUST00000219003.2	chr10	-	5751	25	FSM	ENSMUSG00000019820.12	ENSMUST00000219003.2	5751	25	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_24	17.9698339045066	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTTGATGTTTGGCTGT	NA	False	NA	-3	True	AATAAA	-19	NA	12424623	12257933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12423690
ENSMUST00000219007.2	chr12	+	4977	38	FSM	ENSMUSG00000020640.11	ENSMUST00000219007.2	4977	38	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_32	13.0145729410753	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGGGGAAGCCAGAAC	NA	False	NA	NA	False	NA	NA	NA	4663274	4763197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ENSMUST00000219019.2	chr10	-	677	6	FSM	ENSMUSG00000062981.6	ENSMUST00000219019.2	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	1931.1881316951	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95336385	95316666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95316840_95326107_95326275_95326396_95326444_95329492_95329578_95332685_95332750_95336244
ENSMUST00000219026.2	chr10	+	1946	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219026.2	1946	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	22.9759294335035	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	8832	False	NA	10	True	ATTAAA	-16	NA	127159575	127165812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127159700_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ENSMUST00000219037.2	chr10	+	1383	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	0	0	0	0	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTATTCAGTGTGTAC	NA	False	NA	NA	False	NA	NA	NA	128158327	128163422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUST00000219037.2-0	chr10	+	931	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	86	366	0	0	multi-exon	FALSE	canonical	3	1395	junction_2	667.271938567778	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	33	True	AATGAA	-29	NA	128158413	128163056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUST00000219063.2	chr12	+	4535	18	FSM	ENSMUSG00000052609.10	ENSMUST00000219063.2	4535	18	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	11.6696157090046	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCAGGGAGGGCGAGC	7284	False	NA	NA	False	NA	NA	NA	76580393	76625456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76618377_76618417_76618823_76618844_76619168_76619520_76620020_76620135_76622630_76624051_76624448
ENSMUST00000219069.2	chr12	+	605	2	FSM	ENSMUSG00000051721.7	ENSMUST00000219069.2	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACATGGTGGTGTGTGCC	NA	False	NA	NA	False	AATAAA	-15	NA	4893327	4899343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4893452_4898862
ENSMUST00000219099.2	chr10	-	2971	6	FSM	ENSMUSG00000025358.17	ENSMUST00000219099.2	2971	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_2	293.827160078846	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8247	False	NA	-21	True	ATTAAA	-15	NA	128540900	128533812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794
ENSMUST00000219107.2	chr10	+	2364	1	FSM	ENSMUSG00000019889.11	ENSMUST00000219107.2	2364	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCATTG	NA	False	NA	NA	False	ATTAAA	-19	NA	27950900	27953264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_27950900_27953300
ENSMUST00000219109.2	chr10	-	1844	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_7	35.031985384788	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCGTGTGTCTTTCTTA	NA	False	NA	-7	True	AATAAA	-10	NA	116786336	116742681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ENSMUST00000219143.2	chr10	+	1365	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_10	384.309843167665	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTTTTTTTATTTCA	NA	False	NA	4	True	AATAAA	-21	NA	111309141	111330870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ENSMUST00000219166.2	chr10	+	623	2	FSM	ENSMUSG00000019978.17	ENSMUST00000219166.2	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCCCTTCCTGAAGAAG	NA	False	NA	NA	False	AAAAAG	-44	NA	25308513	25317825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_25308782_25317470
ENSMUST00000219203.2	chr10	-	1844	10	FSM	ENSMUSG00000034602.16	ENSMUST00000219203.2	1844	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	13.8884444373331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTGTATGTGTTTATA	NA	False	NA	NA	False	TATAAA	-43	NA	122912288	122871192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ENSMUST00000219215.2	chr10	-	1051	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	384.57248991575	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCATAATGCTGGGGA	NA	False	NA	7	True	AATAAA	-45	NA	128657475	128654350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128654885_128655822_128655975_128656129_128656430_128657410
ENSMUST00000219216.2	chr10	+	3013	6	FSM	ENSMUSG00000034707.8	ENSMUST00000219216.2	3013	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	7.34846922834953	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATGTGTCCTTTGTTTTT	NA	False	NA	8	True	ATTAAA	-20	NA	121219019	121233154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ENSMUST00000219224.2	chr10	+	563	2	FSM	ENSMUSG00000019978.17	ENSMUST00000219224.2	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGATAAAAAAGAGCCTAC	NA	False	NA	NA	False	NA	NA	NA	25308496	25317769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_25308761_25317470
ENSMUST00000219238.2	chr10	-	7581	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_9	46.8506953451172	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTGTCTGTCTCTTAT	5326	False	NA	-4	True	AATAAA	-23	NA	68114570	67928349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ENSMUST00000219239.2	chr10	-	2238	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	False	NA	-5	True	AATGAA	-15	NA	127358255	127352991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUST00000219239.2-0	chr10	-	2060	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	-16	194	0	-178	multi-exon	FALSE	canonical	3	625	junction_11	417.657853565126	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358271	127353185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUST00000219246.2	chr10	+	754	1	FSM	ENSMUSG00000112825.2	ENSMUST00000219246.2	754	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCATTGAACATTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	56373436	56374190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_56373400_56374200
ENSMUST00000219260.2	chr10	-	4850	33	FSM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	40.6571867686083	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTACAGGTCAG	NA	False	NA	4	True	AATATA	-21	NA	79940204	79892825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894567_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443_79938556_79940035
ENSMUST00000219263.2	chr10	+	3355	25	FSM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_12	28.3996466625125	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTGGACGCCGGAG	NA	False	NA	71	True	NA	NA	NA	107998053	108113212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ENSMUST00000219305.2	chr10	+	2569	5	FSM	ENSMUSG00000035852.12	ENSMUST00000219305.2	2569	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.26917420765551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTGGCCCATTCAT	NA	False	NA	40	True	NA	NA	NA	79658391	79666323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79658570_79661529_79663269_79663711_79663846_79665226_79665266_79665844
ENSMUST00000219317.2	chr10	+	1109	9	FSM	ENSMUSG00000025351.15	ENSMUST00000219317.2	1109	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1695.03832921265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	NA	False	NA	35	True	ATTAAA	-27	NA	128736857	128748691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128737005_128744769_128744922_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUST00000219367.2	chr12	+	855	2	FSM	ENSMUSG00000073000.4	ENSMUST00000219367.2	855	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTCCTGGCACCTCC	NA	False	NA	NA	False	AAAACA	-19	NA	76491270	76495434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76491440_76494748
ENSMUST00000219374.2	chr10	-	1852	12	FSM	ENSMUSG00000061032.10	ENSMUST00000219374.2	1852	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_11	269.317686996093	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGCTTCTCCCATTTTT	NA	False	NA	-17	True	AATAAA	-21	NA	78248826	78236217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78248653
ENSMUST00000219377.2	chr12	-	634	2	FSM	ENSMUSG00000021114.10	ENSMUST00000219377.2	634	2	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTTGTCTGTCATGTGT	9659	False	NA	NA	False	NA	NA	NA	78897290	78895969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_78896559_78897245
ENSMUST00000219378.2	chr10	-	1126	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219378.2	533	5	-266	-327	0	0	multi-exon	FALSE	canonical	3	76	junction_4	475.904664822693	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634394	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633914
ENSMUST00000219379.2	chr10	-	660	3	FSM	ENSMUSG00000112261.2	ENSMUST00000219379.2	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGAGTCACTGAGTTCT	1553	False	NA	NA	False	NA	NA	NA	95297086	95281177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95281620_95296475_95296588_95296980
ENSMUST00000219400.2	chr10	-	3005	21	FSM	ENSMUSG00000020115.4	ENSMUST00000219400.2	3005	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_17	34.6538598138793	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTTGTGTGCTTTT	3888	False	NA	-5	True	AATAAA	-17	NA	121422682	121382364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412182_121412309_121414484_121414626_121420100_121420247_121422599
ENSMUST00000219405.2	chr12	+	393	3	FSM	ENSMUSG00000048833.10	ENSMUST00000219405.2	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	38.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACCACACACAGCTACAT	NA	False	NA	NA	False	NA	NA	NA	80690999	80713401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80691191_80709243_80709353_80713308
ENSMUST00000219415.2	chr10	-	1140	3	FSM	ENSMUSG00000112168.2	ENSMUST00000219415.2	1140	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTACCATTCTGTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	72785624	72776069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_72776843_72780098_72780242_72785400
ENSMUST00000219434.2	chr12	+	2749	14	FSM	ENSMUSG00000020952.11	ENSMUST00000219434.2	2749	14	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_13	120.151925523899	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACATTTTTTAAGATT	NA	False	NA	NA	False	ATTAAA	-15	NA	51424362	51463998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462405
ENSMUST00000219435.2	chr10	+	405	2	FSM	ENSMUSG00000049422.8	ENSMUST00000219435.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	16591	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGCTGTGTGCCCAT	8593	False	NA	20	True	ATTAAA	-17	NA	75773053	75773578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75773289_75773408
ENSMUST00000219442.3	chr10	+	3531	14	FSM	ENSMUSG00000020250.12	ENSMUST00000219442.3	3531	14	0	0	0	0	multi-exon	FALSE	canonical	1	267	junction_2	143.143532881919	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTGCCTTCTGACTGA	NA	False	NA	13	True	AATAAA	-14	NA	82696134	82733544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUST00000219454.2	chr8	+	1513	9	FSM	ENSMUSG00000095941.4	ENSMUST00000219454.2	1513	9	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	3.1224989991992	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACTTTATGAGATATGG	NA	False	NA	-42	True	GGGGCT	-45	NA	110835423	110838593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_110835726_110835834_110835858_110836017_110836077_110836409_110836623_110836712_110836955_110837152_110837295_110837438_110837593_110837930_110838005_110838289
ENSMUST00000219458.2	chr10	+	906	1	FSM	ENSMUSG00000112332.2	ENSMUST00000219458.2	906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAAGGCTGTGGTGTG	2190	False	NA	NA	False	AATAAA	-15	NA	53490464	53491370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_53490500_53491400
ENSMUST00000219479.2	chr10	-	2901	21	FSM	ENSMUSG00000034917.9	ENSMUST00000219479.2	2901	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_20	30.1312130522487	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTATATTA	6983	False	NA	-13	True	AATAAA	-6	NA	81127415	81109061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81127297
ENSMUST00000219506.2	chr10	+	2691	8	FSM	ENSMUSG00000020088.11	ENSMUST00000219506.2	897	8	-35	-1759	0	0	multi-exon	FALSE	canonical	0	0	junction_2	587.872053273846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516108	61529076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61516193_61520012_61520111_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUST00000219508.2	chr10	+	2298	7	FSM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	133.703236892588	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGGAAACATTTTAAA	4138	False	NA	7	True	TTTAAA	-8	NA	128641544	128653372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128641596_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUST00000219508.2-0	chr10	+	3040	7	FSM	ENSMUSG00000025354.6	ENSMUST00000219508.2	2298	7	-93	-649	0	649	multi-exon	FALSE	canonical	3	10	junction_1	133.703236892588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTCCTTCTCTTCTTT	4045	False	NA	NA	False	TATAAA	-18	NA	128641451	128654021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128641596_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUST00000219521.2	chr10	+	2282	1	FSM	ENSMUSG00000112342.2	ENSMUST00000219521.2	2282	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATGCTT	NA	False	NA	NA	False	NA	NA	NA	102155473	102157755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_102155500_102157800
ENSMUST00000219523.2	chr10	+	1497	6	FSM	ENSMUSG00000006731.11	ENSMUST00000219523.2	1497	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	9.6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAATTTTTTTGTTTTG	507	False	NA	NA	False	ATTAAA	-24	NA	127001246	127004392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569
ENSMUST00000219524.2	chr10	-	724	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCAGTCTTCATAGGG	NA	False	NA	NA	False	GATAAA	-45	NA	128657514	128654591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
ENSMUST00000219524.2-1	chr10	-	993	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219524.2	724	4	39	-308	0	67	multi-exon	FALSE	canonical	3	322	junction_3	240.049994792751	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTCTACTCCTTTGG	NA	False	NA	2	True	TATAAA	-19	NA	128657475	128654283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128654885_128655822_128655975_128656129_128656305_128657410
ENSMUST00000219527.2	chr10	-	3862	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	85.6392222576133	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	False	NA	1	True	AATAAA	-35	NA	62628065	62580240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ENSMUST00000219529.2	chr12	-	3581	21	FSM	ENSMUSG00000021027.18	ENSMUST00000219529.2	3581	21	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_2	17.649645888799	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATATTTTTTCTTATTT	NA	False	NA	NA	False	ATTAAA	-12	NA	55867866	55759254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ENSMUST00000219550.2	chr10	+	915	1	FSM	ENSMUSG00000112222.2	ENSMUST00000219550.2	915	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGAGCTTTCAGTGATGC	NA	False	NA	NA	False	ATTAAA	-16	NA	87802708	87803623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_87802700_87803600
ENSMUST00000219555.2	chr12	+	2526	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGCTGTCTGGCGTTT	NA	False	NA	NA	False	AGTAAA	-16	NA	76451182	76453708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76451200_76453700
ENSMUST00000219571.2	chr12	-	824	3	FSM	ENSMUSG00000066440.6	ENSMUST00000219571.2	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	9.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCACCACCACTGCCC	NA	False	NA	NA	False	NA	NA	NA	79343052	79340203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_79340679_79342250_79342547_79342999
ENSMUST00000219574.2	chr10	-	2288	7	FSM	ENSMUSG00000020078.17	ENSMUST00000219574.2	2288	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	463.80362822595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5271	False	NA	-6	True	AATAAA	-17	NA	62322511	62291050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62305679_62305837_62316336_62316487_62322436
ENSMUST00000219577.2	chr10	+	3914	26	FSM	ENSMUSG00000020064.10	ENSMUST00000219577.2	3914	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_16	90.360929610092	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079701	63153657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63139623_63139648_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUST00000219583.2	chr10	+	670	3	FSM	ENSMUSG00000112188.2	ENSMUST00000219583.2	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAAGTAATCTAGG	3220	False	NA	NA	False	NA	NA	NA	95567088	95575215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_95567365_95570676_95570791_95574935
ENSMUST00000219601.2	chr10	-	2673	4	FSM	ENSMUSG00000025358.17	ENSMUST00000219601.2	2673	4	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_2	120.181344457264	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATATTTGTTAAGCA	8279	False	NA	NA	False	NA	NA	NA	128540868	128536006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128537314_128538281_128538453_128539575_128539697_128539794
ENSMUST00000219721.2	chr10	+	4316	26	FSM	ENSMUSG00000005682.10	ENSMUST00000219721.2	4316	26	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	56.9842083388021	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGCTAGTGTGGGA	NA	False	NA	9	True	AATAAA	-18	NA	128139245	128157216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128139341_128139963_128140363_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUST00000219759.2	chr10	+	4212	15	FSM	ENSMUSG00000019907.11	ENSMUST00000219759.2	4212	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.8785969824748	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGCACTTTGTGTAT	NA	False	NA	NA	False	AGTAAA	-19	NA	108085454	108115845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ENSMUST00000219761.2	chr10	+	1464	3	FSM	ENSMUSG00000019889.11	ENSMUST00000219761.2	1464	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTGTGTTGATTATTC	NA	False	NA	NA	False	NA	NA	NA	27951005	28140669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_27951174_28082129_28082253_28139496
ENSMUST00000219765.2	chr10	+	7985	52	FSM	ENSMUSG00000019971.11	ENSMUST00000219765.2	7985	52	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_16	7.32929531270596	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCATAATTGTTCAGGT	NA	False	NA	NA	False	ATTAAA	-22	NA	100324150	100409517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ENSMUST00000219767.2	chr10	-	1261	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_2	144.890260197157	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCATGTCGGAATGAGT	NA	False	NA	-6	True	AATAAA	-14	NA	80634394	80631935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633812_80633914
ENSMUST00000219767.2-0	chr10	-	898	5	FSM	ENSMUSG00000035278.10	ENSMUST00000219767.2	1261	5	366	-3	0	0	multi-exon	FALSE	canonical	3	943	junction_2	144.890260197157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634028	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633812_80633914
ENSMUST00000219768.2	chr10	+	2155	3	FSM	ENSMUSG00000020087.6	ENSMUST00000219768.2	306	3	-1133	-716	0	0	multi-exon	FALSE	canonical	0	0	junction_1	138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTCTGTTGGCTGCTTTT	NA	False	NA	21	True	AATAAA	-24	NA	61531292	61538552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_61532522_61535221_61535408_61537812
ENSMUST00000219773.2	chr10	-	903	2	FSM	ENSMUSG00000025362.7	ENSMUST00000219773.2	903	2	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATCACAGGAAAGGGCG	NA	False	NA	NA	False	AGTAAA	-37	NA	128462393	128461255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128462110_128462344
ENSMUST00000219791.2	chr10	+	1131	4	FSM	ENSMUSG00000020307.16	ENSMUST00000219791.2	799	4	-209	-123	0	0	multi-exon	FALSE	canonical	3	28	junction_3	942.677510545833	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79518028	79524232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79523682
ENSMUST00000219801.2	chr10	+	3410	2	FSM	ENSMUSG00000005682.10	ENSMUST00000219801.2	3410	2	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128139244	128143277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_128139341_128139963
ENSMUST00000219812.2	chr12	+	628	1	FSM	ENSMUSG00000112145.2	ENSMUST00000219812.2	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCGCTGTTGGAGAGT	NA	False	NA	NA	False	AAAAAG	-40	NA	54669375	54670003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_54669400_54670000
ENSMUST00000219831.2	chr10	+	2758	1	FSM	ENSMUSG00000112790.2	ENSMUST00000219831.2	2758	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAGTCAGGGTTTCTA	3797	False	NA	NA	False	AATAAA	-18	NA	81850306	81853064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81850300_81853100
ENSMUST00000219839.2	chr10	+	1488	5	FSM	ENSMUSG00000049422.8	ENSMUST00000219839.2	1488	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7283.8894829617	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	4503	False	NA	23	True	ATTAAA	-20	NA	75768963	75773581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_75769333_75771248_75771839_75772071_75772280_75773140_75773289_75773408
ENSMUST00000219850.2	chr10	+	1482	8	FSM	ENSMUSG00000034974.14	ENSMUST00000219850.2	1482	8	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	22.2609752798067	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTCCACGTACTGT	9468	False	NA	-5	True	NA	NA	NA	81019751	81028817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ENSMUST00000219855.2	chr12	-	296	1	FSM	ENSMUSG00000020648.4	ENSMUST00000219855.2	296	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTGAGTTGGTCTGG	9110	False	NA	NA	False	AATAAA	-21	NA	31704775	31704479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_31704500_31704800
ENSMUST00000219870.2	chr10	+	1410	6	FSM	ENSMUSG00000054452.11	ENSMUST00000219870.2	1410	6	0	0	0	0	multi-exon	FALSE	canonical	3	2772	junction_5	277.977984739799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTGTGTCCCTGCTTC	622	False	NA	13	True	AATAAA	-15	NA	81396877	81402195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUST00000219890.2	chr10	-	2949	7	FSM	ENSMUSG00000069520.7	ENSMUST00000219890.2	2949	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	79.1568414955748	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGTTTTGTTTTTA	NA	False	NA	-4	True	TATAAA	-19	NA	115198129	115176646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115197864
ENSMUST00000219896.2	chr10	-	542	3	FSM	ENSMUSG00000020219.8	ENSMUST00000219896.2	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	1726.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTCACCTCACTGCTTCA	5632	False	NA	-7	True	AATAAA	-25	NA	80736619	80735737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80736094_80736315_80736385_80736502
ENSMUST00000219915.2	chr10	+	2733	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_14	97.3053197904183	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTGCAAAAATGTGT	NA	False	NA	12	True	AATAAA	-14	NA	21171931	21244782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUST00000219930.2	chr10	+	1259	5	FSM	ENSMUSG00000020307.16	ENSMUST00000219930.2	534	5	-267	-458	0	0	multi-exon	FALSE	canonical	3	123	junction_4	797.39838694344	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79518028	79524232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523689
ENSMUST00000219937.2	chr10	-	1587	9	FSM	ENSMUSG00000020124.11	ENSMUST00000219937.2	1587	9	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_8	53.0023584380922	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTTTCTTTAATTTTT	NA	False	NA	2	True	AATAAA	-32	NA	122963790	122949132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582
ENSMUST00000219962.3	chr10	+	2297	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219962.3	2297	15	0	0	0	0	multi-exon	TRUE	canonical	1	267	junction_3	142.059218034492	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGTAGCATTGTCTC	NA	False	NA	NA	False	AATACA	-16	NA	82695040	82732439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_82695135_82696357_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUST00000220027.2	chr10	-	1307	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	35.9400542570542	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTCATTTTTTGAG	7245	False	NA	-3	True	AATAAA	-12	NA	128204560	128198968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
ENSMUST00000220032.2	chr10	-	3962	12	FSM	ENSMUSG00000035529.11	ENSMUST00000220032.2	3962	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	54.6866354713247	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752850	85727829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ENSMUST00000220035.2	chr12	-	3135	13	FSM	ENSMUSG00000021051.11	ENSMUST00000220035.2	3135	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	57.382428107876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATCAAAGGTGCATC	NA	False	NA	-16	True	AATAAA	-14	NA	75643019	75499272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75562375_75562573_75639942_75640107_75642408
ENSMUST00000220041.2	chr10	+	2148	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	26	1261	0	0	multi-exon	FALSE	canonical	3	188	junction_6	15.4632180063243	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTCCCAAGAACTCT	NA	False	NA	23	True	AATAAA	-25	NA	24025250	24064859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUST00000220043.2	chr12	+	818	1	FSM	ENSMUSG00000073000.4	ENSMUST00000220043.2	818	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTTGCCTCAGTCGTGGT	NA	False	NA	10	True	NA	NA	NA	76496471	76497289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76496500_76497300
ENSMUST00000220046.2	chr12	+	3040	27	FSM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	281.366814005612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	8026	False	NA	8	True	AATAAA	-16	NA	76302186	76366576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_76302319_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUST00000220052.2	chr10	+	3910	7	FSM	ENSMUSG00000020024.8	ENSMUST00000220052.2	3910	7	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_6	27.6872413456692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTGAGGTAGGATCTT	9520	False	NA	NA	False	AATAAA	-17	NA	94524531	94578555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918
ENSMUST00000220070.2	chr10	-	494	5	FSM	ENSMUSG00000061983.8	ENSMUST00000220070.2	494	5	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	596.623153674076	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGTATTTCT	NA	False	NA	-18	True	AATAAA	-13	NA	23662987	23661095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891
ENSMUST00000220086.2	chr10	+	871	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13432	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATCTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106018881	106019752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_106018900_106019800
ENSMUST00000220110.2	chr10	-	768	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220110.2	768	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	67	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTCCTGGTGGCTGTG	NA	False	NA	-8	True	AATAAA	-18	NA	17898966	17887011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_17887565_17894586_17894650_17898814
ENSMUST00000220111.2	chr10	-	729	2	FSM	ENSMUSG00000039914.7	ENSMUST00000220111.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGGCCTTGAACTTGAT	6955	False	NA	NA	False	NA	NA	NA	128204850	128203577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128204023_128204566
ENSMUST00000220127.2	chr10	+	1103	4	FSM	ENSMUSG00000074781.6	ENSMUST00000220127.2	1103	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	985.351826619417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCTTTGTACAGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	95351046	95378868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_95351100_95377066_95377241_95377499_95377641_95378133
ENSMUST00000220162.2	chr10	+	2304	2	FSM	ENSMUSG00000019878.9	ENSMUST00000220162.2	2304	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTATTGTTTGTTGAGT	NA	False	NA	14	True	AATAAA	-15	NA	57386283	57388961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_57387625_57387998
ENSMUST00000220164.2	chr10	+	1732	1	FSM	ENSMUSG00000034833.11	ENSMUST00000220164.2	1732	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-12	NA	130164612	130166344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_130164600_130166300
ENSMUST00000220165.2	chr10	-	2036	1	FSM	ENSMUSG00000074734.4	ENSMUST00000220165.2	2036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTCTGTTTTATGTTTTG	NA	False	NA	NA	False	AATAAA	-39	NA	115949607	115947571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_115947600_115949600
ENSMUST00000220202.2	chr10	-	642	4	FSM	ENSMUSG00000004937.7	ENSMUST00000220202.2	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_3	126.67631542198	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGCTTTAAAGTGGCA	4769	False	NA	NA	False	AATATA	-2	NA	80896015	80886572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_80886918_80887056_80887164_80887949_80888086_80895961
ENSMUST00000220210.2	chr12	+	4144	9	FSM	ENSMUSG00000020668.11	ENSMUST00000220210.2	4144	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	19.8679232684244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCATTGACCTTTATT	NA	False	NA	4	True	AGTAAA	-19	NA	3415131	3454064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_3415497_3415771_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ENSMUST00000220222.2	chr19	+	1522	1	FSM	ENSMUSG00000112693.2	ENSMUST00000220222.2	1522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGATCCTGAGGTCCAG	NA	False	NA	NA	False	GGGGCT	-45	NA	12882683	12884205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_12882700_12884200
ENSMUST00000220227.2	chr10	-	1434	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	16.3248277173145	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGTCATTTTTTGAG	6939	False	NA	-3	True	AATAAA	-12	NA	128204866	128198968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
ENSMUST00000220238.2	chr12	+	5040	7	FSM	ENSMUSG00000021133.10	ENSMUST00000220238.2	2127	7	49	-2962	0	0	multi-exon	FALSE	canonical	1	6	junction_2	21.4689698557399	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGATGTAGTCCTTCCC	3459	False	NA	17	True	AATAAA	-19	NA	80837332	80927609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_80837590_80874799_80875018_80897987_80898051_80915200_80915399_80916848_80916985_80920922_80921351_80923869
ENSMUST00000220256.2	chr10	+	697	2	FSM	ENSMUSG00000111888.2	ENSMUST00000220256.2	1003	2	632	-326	632	326	multi-exon	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATTTATTACGCCTAT	NA	False	NA	NA	False	AATAAA	-19	NA	14420865	14427101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_14421099_14426637
ENSMUST00000220279.2	chr10	-	1613	2	FSM	ENSMUSG00000045867.11	ENSMUST00000220279.2	1613	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCGTGTCCATT	NA	False	NA	NA	False	ATTAAA	-13	NA	95158827	95010607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_95011841_95158447
ENSMUST00000220287.2	chr10	+	2726	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	4.78423336480244	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATATACTGCCATCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	81919186	81947050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
ENSMUST00000220303.2	chr9	+	5760	8	FSM	ENSMUSG00000063382.7	ENSMUST00000220303.2	5760	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	3.98978286964827	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCCCCCTCTTTCAAA	1918	False	NA	39	True	NA	NA	NA	44394121	44421719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44394784_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ENSMUST00000220314.2	chr10	+	2379	4	FSM	ENSMUSG00000112640.2	ENSMUST00000220314.2	2379	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.55902608401044	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATATTTATACTGCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	81699767	81716915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_81699844_81713862_81713990_81714188_81714250_81714800
ENSMUST00000220352.2	chr10	+	1842	4	FSM	ENSMUSG00000020024.8	ENSMUST00000220352.2	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	88.9044430835715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAGAAAAGAAAAG	9568	False	NA	NA	False	CATAAA	-34	NA	94524579	94557635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94556541
ENSMUST00000220369.2	chr12	-	4981	25	FSM	ENSMUSG00000035181.7	ENSMUST00000220369.2	4981	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_23	7.65113916717998	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCACTTTCTACATGG	7359	False	NA	NA	False	TATAAA	-18	NA	51986733	51923752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353
ENSMUST00000220377.2-1	chr10	-	4771	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	24	6730	-5	0	multi-exon	FALSE	canonical	3	236	junction_15	99.6636747895759	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	False	NA	-1	True	AATAAA	-16	NA	123032876	122947640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUST00000220380.2	chr10	-	5690	1	FSM	ENSMUSG00000112622.2	ENSMUST00000220380.2	5690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGGCCATCACTGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	103049298	103043608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_103043600_103049300
ENSMUST00000220387.2	chr10	-	632	1	FSM	ENSMUSG00000112580.2	ENSMUST00000220387.2	632	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100269431	100268799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_100268800_100269400
ENSMUST00000220419.2	chr10	+	1665	3	FSM	ENSMUSG00000097412.3	ENSMUST00000220419.2	1665	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	104.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTATGTGTATGAGT	NA	False	NA	1	True	AGTAAA	-10	NA	86521474	86525818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_86521602_86521743_86521861_86524397
ENSMUST00000220443.2	chr10	-	7425	13	FSM	ENSMUSG00000038594.10	ENSMUST00000220443.2	7425	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	3.73794358200097	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTTTCATGGTGCCTA	NA	False	NA	NA	False	AATAAA	-15	NA	53256043	53149538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_53154341_53157444_53157677_53159932_53160041_53167859_53167911_53168353_53168472_53172309_53172465_53174148_53174302_53177597_53177778_53188603_53188722_53195693_53195816_53224567_53225356_53234144_53234304_53255604
ENSMUST00000220444.2	chr10	+	1627	1	FSM	ENSMUSG00000112932.2	ENSMUST00000220444.2	1627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAACCGAAAGGAACAA	812	False	NA	NA	False	NA	NA	NA	87924059	87925686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_87924100_87925700
ENSMUST00000220447.2	chr13	+	4421	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATGACATTTTCAACT	NA	False	NA	NA	False	ATTAAA	-29	NA	49574724	49618049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ENSMUST00000220447.2-0	chr13	+	2838	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	0	1583	0	0	multi-exon	FALSE	canonical	3	101	junction_9	16.41053184865	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATAGAGTTTGTTAAAT	NA	False	NA	11	True	NA	NA	NA	49574724	49616466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ENSMUST00000220449.2	chr13	-	2161	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGCCAGAGCAATTAG	NA	False	NA	NA	False	NA	NA	NA	96217884	96215723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_96215700_96217900
ENSMUST00000220469.2	chr13	-	478	3	FSM	ENSMUSG00000113135.2	ENSMUST00000220469.2	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	85	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAGACCAGCCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	65768057	65763637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65763903_65764103_65764190_65767930
ENSMUST00000220477.2	chr12	-	2502	2	FSM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	0	439	0	-439	multi-exon	FALSE	canonical	2	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGTGTCTCGC	NA	False	NA	2	True	NA	NA	NA	116368830	116366005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_116368264_116368586
ENSMUST00000220478.2	chr13	-	1989	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220478.2	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	36.0366480128216	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTAGAATGCAATCAATG	4826	False	NA	NA	False	NA	NA	NA	74765821	74754903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320
ENSMUST00000220509.2	chr12	+	956	8	FSM	ENSMUSG00000017843.15	ENSMUST00000220509.2	956	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	355.525710198637	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGGGAAGGTAAGGCGC	NA	False	NA	NA	False	NA	NA	NA	110413685	110517544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495
ENSMUST00000220517.2	chr12	-	1449	1	FSM	ENSMUSG00000113569.2	ENSMUST00000220517.2	1449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGAGAGAAACCCTATGA	NA	False	NA	NA	False	NA	NA	NA	22776591	22775142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_22775100_22776600
ENSMUST00000220565.2	chr12	+	721	1	FSM	ENSMUSG00000113749.2	ENSMUST00000220565.2	721	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAGCCAGGACTATGG	NA	False	NA	NA	False	NA	NA	NA	20467722	20468443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_20467700_20468400
ENSMUST00000220578.2	chr12	+	2143	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	264	2091	0	385	multi-exon	FALSE	canonical	3	524	junction_1	133.408578767967	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGTTCGTTAACTTTC	2840	False	NA	NA	False	AATAAA	-16	NA	55127310	55160061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUST00000220613.2	chr13	-	814	1	FSM	ENSMUSG00000090497.3	ENSMUST00000220613.2	814	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCATAGGGGTCAGGACC	NA	False	NA	NA	False	AAAAAG	-33	NA	50131110	50130296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_50130300_50131100
ENSMUST00000220617.2	chr13	-	364	2	FSM	ENSMUSG00000021477.10	ENSMUST00000220617.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	1435	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCTAGGATTTAAGTCA	NA	False	NA	NA	False	NA	NA	NA	64518120	64516685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64516979_64518049
ENSMUST00000220621.2	chr13	-	3013	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTGAGTTTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	14787750	14782768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14785326_14786007_14786190_14787476
ENSMUST00000220621.2-0	chr13	-	757	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	138	2118	0	71	multi-exon	FALSE	canonical	3	1082	junction_1	15.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAATGGATTAATTTGT	NA	False	NA	-12	True	AATAAA	-20	NA	14787612	14784886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14785326_14786007_14786190_14787476
ENSMUST00000220627.2	chr12	+	5395	18	FSM	ENSMUSG00000072825.12	ENSMUST00000220627.2	5395	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.0651737788804	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGAGTGGCAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	112691052	112712089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707312_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ENSMUST00000220628.2	chr13	-	3634	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	22.9249984853992	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	13568209	13533200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUST00000220631.2	chr12	-	1356	3	FSM	ENSMUSG00000021276.11	ENSMUST00000220631.2	1356	3	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	12	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGCTCTTTCTTTTTT	3361	False	NA	-2	True	AATACA	-15	NA	110855567	110845129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110846249_110850323_110850493_110855499
ENSMUST00000220632.2	chr13	-	1513	5	FSM	ENSMUSG00000112964.2	ENSMUST00000220632.2	1513	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	17.8395627749113	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATACTGGAGAGAAACCT	5759	False	NA	NA	False	NA	NA	NA	74611548	74595659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700_74610786_74611327
ENSMUST00000220637.2	chr13	-	2195	7	FSM	ENSMUSG00000034525.8	ENSMUST00000220637.2	2195	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	59.864894183115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTGTGATTGTTTTAT	NA	False	NA	-7	True	AATAAA	-21	NA	70750684	70736813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749319_70750297
ENSMUST00000220648.2	chr13	-	2439	5	FSM	ENSMUSG00000074865.12	ENSMUST00000220648.2	2439	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	32.4152741774615	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	False	NA	NA	False	NA	NA	NA	62706413	62664610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62682424_62682629_62706300
ENSMUST00000220701.2	chr12	-	212	2	FSM	ENSMUSG00000034442.12	ENSMUST00000220701.2	212	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACACAGATATTTGTTA	NA	False	NA	-95	True	NA	NA	NA	73329445	73327254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_73327407_73329385
ENSMUST00000220709.2	chr12	+	1132	1	FSM	ENSMUSG00000073198.6	ENSMUST00000220709.2	1132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTAGTCTTTGTTTTG	NA	False	NA	NA	False	AAAAAG	-2	NA	18266542	18267674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_18266500_18267700
ENSMUST00000220713.2	chr13	-	2874	2	FSM	ENSMUSG00000021417.16	ENSMUST00000220713.2	2874	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTCGGTCTCAGTGTCT	969	False	NA	NA	False	NA	NA	NA	35211079	35189196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_35191983_35210991
ENSMUST00000220715.2	chr12	+	4035	9	FSM	ENSMUSG00000021143.11	ENSMUST00000220715.2	4035	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_8	12.0933866224478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGATTTCTCTGAATGT	2445	False	NA	13	True	AATAAA	-25	NA	113025824	113038006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUST00000220733.2	chr13	-	2859	7	FSM	ENSMUSG00000074863.6	ENSMUST00000220733.2	2859	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	104.907366545708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	1	True	AATAAA	-20	NA	62908514	62819597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62853514_62853576_62853943_62854071_62886705_62886913_62908395
ENSMUST00000220739.2	chr13	-	3661	2	FSM	ENSMUSG00000113847.2	ENSMUST00000220739.2	3661	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATCCATAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	18182929	18176894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_18180441_18182814
ENSMUST00000220758.2	chr13	-	1942	7	FSM	ENSMUSG00000097715.3	ENSMUST00000220758.2	1942	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	73.7896785917019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTGTAGAGTTTTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	12665277	12629945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_12630739_12632613_12632739_12634654_12634784_12636246_12636397_12638757_12638981_12645583_12645634_12664805
ENSMUST00000220797.2	chr13	-	1124	1	FSM	ENSMUSG00000113911.2	ENSMUST00000220797.2	1124	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTCTCCCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	65545492	65544368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65544400_65545500
ENSMUST00000220798.2	chr12	+	3457	15	FSM	ENSMUSG00000035597.20	ENSMUST00000220798.2	3457	15	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_9	125.885678620058	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTGTTGATGAATTCA	7508	False	NA	19	True	AATAAA	-16	NA	65083107	65108929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ENSMUST00000220806.2	chr13	+	2028	1	FSM	ENSMUSG00000113326.2	ENSMUST00000220806.2	2028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	63392034	63394062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_63392000_63394100
ENSMUST00000220818.2	chr13	-	2746	2	FSM	ENSMUSG00000113404.2	ENSMUST00000220818.2	2746	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTTTATGTGTTTGT	NA	False	NA	NA	False	AATATA	-12	NA	54481899	54463923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_54466497_54481726
ENSMUST00000220829.2	chr12	-	2458	1	FSM	ENSMUSG00000113476.2	ENSMUST00000220829.2	2458	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAATAAATAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	13475718	13473260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_13473300_13475700
ENSMUST00000220854.2	chr12	-	4699	13	FSM	ENSMUSG00000021245.16	ENSMUST00000220854.2	4699	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	18.8126730335342	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGTGAGTTGGCTTAT	NA	False	NA	NA	False	GATAAA	-15	NA	85317373	85282153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85309540_85309637_85312925_85316249_85317312
ENSMUST00000220861.2	chr13	-	1262	4	FSM	ENSMUSG00000021576.7	ENSMUST00000220861.2	1262	4	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_1	15.7550697307953	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTATTGTGAATATCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	74465403	74456984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUST00000220871.2	chr13	+	2707	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	103.747556865478	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAGGCTTTTCCCAATA	NA	False	NA	NA	False	NA	NA	NA	62163418	62198800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
ENSMUST00000220882.2	chr12	+	1840	5	FSM	ENSMUSG00000021113.6	ENSMUST00000220882.2	1840	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	37.8508586428366	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGTAGTTTGTTACAG	NA	False	NA	NA	False	NA	NA	NA	74017026	74030881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029411
ENSMUST00000220896.2	chr12	+	2016	2	FSM	ENSMUSG00000093908.3	ENSMUST00000220896.2	2016	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTCTGTGAGACTTGT	NA	False	NA	NA	False	NA	NA	NA	19437864	19483082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_19438215_19481416
ENSMUST00000220899.2	chr12	-	1994	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	0	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATGTGTTAGGAGC	9612	False	NA	-8	True	ATTAAA	-11	NA	112793043	112783856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112785733_112792925
ENSMUST00000220916.2	chr12	+	1599	6	FSM	ENSMUSG00000054894.7	ENSMUST00000220916.2	1599	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	68.5787138987018	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGCTAGTCTTTACTT	NA	False	NA	4	True	AATAAA	-16	NA	69771723	69791434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69771789_69772228_69772329_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ENSMUST00000220929.2	chr13	-	3371	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220929.2	1179	6	0	-2192	0	0	multi-exon	FALSE	canonical	3	7	junction_4	38.8453343401753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5218	False	NA	-5	True	NA	NA	NA	74765429	74753063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765320
ENSMUST00000220945.2	chr13	-	364	2	FSM	ENSMUSG00000113955.2	ENSMUST00000220945.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCTTCGTTCCATTAT	NA	False	NA	NA	False	NA	NA	NA	65644607	65639602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65639775_65644415
ENSMUST00000220950.2	chr12	-	4475	1	FSM	ENSMUSG00000113161.2	ENSMUST00000220950.2	4475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTAAGAAGGACACATGC	NA	False	NA	NA	False	NA	NA	NA	68487056	68482581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_68482600_68487100
ENSMUST00000220957.2	chr12	-	1910	6	FSM	ENSMUSG00000020949.10	ENSMUST00000220957.2	1910	6	0	0	0	0	multi-exon	FALSE	canonical	3	9641	junction_1	352.767005259846	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65117907	65109197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724
ENSMUST00000220963.2	chr12	+	5907	22	FSM	ENSMUSG00000042700.17	ENSMUST00000220963.2	5907	22	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	22.1136007440779	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATACTCTTTATTAT	NA	False	NA	NA	False	ATTAAA	-27	NA	82216219	82493903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_82216278_82216789_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590
ENSMUST00000220974.2	chr12	-	3565	13	FSM	ENSMUSG00000042507.16	ENSMUST00000220974.2	3565	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	22.3288241716596	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCGCACATCAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	84265655	84199232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84199336_84199608_84199806_84201668_84201882_84203200_84203351_84205028_84205118_84205749_84205826_84206423_84206528_84206648_84206792_84207252_84207320_84209029_84209376_84218233_84218534_84219527_84221198_84265548
ENSMUST00000220983.2	chr12	-	654	5	FSM	ENSMUSG00000020949.10	ENSMUST00000220983.2	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4405.18495638946	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCTTGTAAACTAGAAGA	NA	False	NA	-59	True	NA	NA	NA	65120674	65109254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_65109515_65110451_65110550_65115775_65115884_65116724_65116827_65120588
ENSMUST00000220994.2	chr12	-	2625	1	FSM	ENSMUSG00000113795.2	ENSMUST00000220994.2	2625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTTCTGCACAAACTAT	NA	False	NA	NA	False	NA	NA	NA	116816722	116814097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_116814100_116816700
ENSMUST00000220997.2	chr13	+	220	2	FSM	ENSMUSG00000063200.5	ENSMUST00000220997.2	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	1479	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTGCAGTTTCTAC	NA	False	NA	NA	False	NA	NA	NA	43552110	43553045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_43552272_43552986
ENSMUST00000221015.2	chr12	-	3687	21	FSM	ENSMUSG00000041341.11	ENSMUST00000221015.2	3687	21	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_14	7.97793833017027	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTGTATACGTCCATG	1572	False	NA	2	True	AATAAA	-21	NA	105613088	105582394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011
ENSMUST00000221043.2	chr12	-	3666	2	FSM	ENSMUSG00000112496.3	ENSMUST00000221043.2	3666	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTATCCGTAAGTTCT	NA	False	NA	NA	False	NA	NA	NA	9559637	9553583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_9557136_9559523
ENSMUST00000221045.2	chr13	+	4197	2	FSM	ENSMUSG00000021598.10	ENSMUST00000221045.2	4197	2	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTCATGTAATTCTTA	16	False	NA	23	True	AATAAA	-19	NA	69958009	69964219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_69959810_69961822
ENSMUST00000221074.2	chr12	+	4293	15	FSM	ENSMUSG00000017843.15	ENSMUST00000221074.2	1971	15	-120	-2202	0	0	multi-exon	FALSE	canonical	3	61	junction_14	373.202494687289	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	4921	False	NA	3	True	AATAAA	-17	NA	110452172	110549496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
ENSMUST00000221102.2	chr12	-	1326	4	FSM	ENSMUSG00000021276.11	ENSMUST00000221102.2	536	4	-5	-785	0	0	multi-exon	FALSE	canonical	2	10	junction_1	203.882318997995	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3370	False	NA	-10	True	NA	NA	NA	110855558	110839595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110840564_110846118_110846249_110850323_110850493_110855499
ENSMUST00000221108.2	chr13	+	1599	1	FSM	ENSMUSG00000021458.18	ENSMUST00000221108.2	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAGCACTCTGGCCTTG	NA	False	NA	26	True	AATAAA	-26	NA	63449086	63450685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_63449100_63450700
ENSMUST00000221110.2	chr13	-	2177	1	FSM	ENSMUSG00000042857.4	ENSMUST00000221110.2	2177	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCTCTGTGTGTCTTA	NA	False	NA	NA	False	TATAAA	-28	NA	94495431	94493254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_94493300_94495400
ENSMUST00000221118.2	chr13	-	615	5	FSM	ENSMUSG00000021482.11	ENSMUST00000221118.2	615	5	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_1	73.4042743987024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGCTCCTGGGTTCCGAG	NA	False	NA	NA	False	NA	NA	NA	64460407	64423385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64423671_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUST00000221129.2	chr12	-	1425	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	6.04841577054135	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTTTCTTGTGTTCT	NA	False	NA	-2	True	AATAAA	-12	NA	17374731	17334725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
ENSMUST00000221142.2	chr13	+	4381	17	FSM	ENSMUSG00000021392.9	ENSMUST00000221142.2	4381	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	40.4735639028737	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTCTTTTATTTAAAAA	NA	False	NA	23	True	ATTAAA	-16	NA	49806814	49832492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49807159_49807826_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813495_49814433_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ENSMUST00000221149.2	chr12	+	550	2	FSM	ENSMUSG00000113642.2	ENSMUST00000221149.2	550	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGATTGCTTGCTGGACA	NA	False	NA	18	True	AATAAA	-12	NA	17950734	18112465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17950788_18111968
ENSMUST00000221154.2	chr13	+	781	1	FSM	ENSMUSG00000114003.2	ENSMUST00000221154.2	781	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGGTCTCTAGGGGAC	NA	False	NA	NA	False	NA	NA	NA	3348886	3349667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_3348900_3349700
ENSMUST00000221166.2	chr12	-	981	7	FSM	ENSMUSG00000020949.10	ENSMUST00000221166.2	981	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3855.04114764032	2936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTGTGTTCTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	65120736	65109197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116720_65116827_65120588
ENSMUST00000221173.2	chr13	-	1549	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	20.0546129356814	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCTTGGTCATGATGTC	NA	False	NA	NA	False	NA	NA	NA	74642111	74628175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
ENSMUST00000221191.2	chr12	-	299	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	220	-8	220	0	multi-exon	FALSE	canonical	3	411	junction_2	787	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATTTAAAGTGTGATT	NA	False	NA	-9	True	AATAAA	-20	NA	101941966	101934360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101934470_101935751_101935894_101941918
ENSMUST00000221192.2	chr13	+	1284	1	FSM	ENSMUSG00000113477.2	ENSMUST00000221192.2	1284	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTAGGCTCTCCCAGC	NA	False	NA	NA	False	NA	NA	NA	66311592	66312876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_66311600_66312900
ENSMUST00000221211.2	chr12	-	2669	8	FSM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_7	42.8480942828671	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGGTTGAGTAAAGGAG	NA	False	NA	NA	False	AATAAA	-14	NA	103392083	103375876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ENSMUST00000221221.2	chr12	+	1810	1	FSM	ENSMUSG00000035597.20	ENSMUST00000221221.2	1810	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAACAGAAAGAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	65095089	65096899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_65095100_65096900
ENSMUST00000221230.2	chr12	-	4114	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAAAAAAAGCAGT	7239	False	NA	NA	False	NA	NA	NA	16639774	16587040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ENSMUST00000221230.2-0	chr12	-	5193	20	FSM	ENSMUSG00000020593.17	ENSMUST00000221230.2	4114	20	7	-1086	0	0	multi-exon	FALSE	canonical	3	46	junction_15	24.5031514734934	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	7246	False	NA	-22	True	AATAAA	-27	NA	16639767	16585954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ENSMUST00000221245.2	chr13	-	1093	1	FSM	ENSMUSG00000113713.2	ENSMUST00000221245.2	1093	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGACCTTTAATA	NA	False	NA	NA	False	AATATA	-25	NA	66370284	66369191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66369200_66370300
ENSMUST00000221264.2	chr13	+	471	2	FSM	ENSMUSG00000021476.10	ENSMUST00000221264.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACATTGGTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	64310059	64311432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_64310149_64311050
ENSMUST00000221279.2	chr13	-	879	2	FSM	ENSMUSG00000074865.12	ENSMUST00000221279.2	879	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCCCCTTACCCAGCT	NA	False	NA	NA	False	NA	NA	NA	62719013	62700056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62700797_62718874
ENSMUST00000221280.2	chr13	-	579	2	FSM	ENSMUSG00000032999.11	ENSMUST00000221280.2	579	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCTACTGACTTCT	NA	False	NA	-16	True	ATTAAA	-15	NA	65329445	65324933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65325478_65329410
ENSMUST00000221295.2	chr12	+	556	1	FSM	ENSMUSG00000113948.2	ENSMUST00000221295.2	556	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2067	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGCATAAAATAAAGGCA	NA	False	NA	NA	False	AAGAAA	-35	NA	67557529	67558085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_67557500_67558100
ENSMUST00000221301.2	chr12	-	1740	3	FSM	ENSMUSG00000113691.2	ENSMUST00000221301.2	1740	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATGTGGGAAAGCCTT	NA	False	NA	NA	False	NA	NA	NA	23834132	23830857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_23832410_23833744_23833806_23834005
ENSMUST00000221312.2	chr12	+	2520	14	FSM	ENSMUSG00000021115.16	ENSMUST00000221312.2	2520	14	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_12	248.778292970376	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGGGTAATTTATAAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	105976541	106041459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106037901_106039877_106039938_106041265
ENSMUST00000221329.2	chr4	-	1776	4	FSM	ENSMUSG00000028389.13	ENSMUST00000221329.2	1776	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	10.3708994574027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGGAAACCTGACAACTG	NA	False	NA	NA	False	NA	NA	NA	62126598	62109400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126565
ENSMUST00000221363.2	chr12	+	2584	2	FSM	ENSMUSG00000021282.18	ENSMUST00000221363.2	2584	2	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAAGGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111505464	111508161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111506122_111506234
ENSMUST00000221368.2	chr12	+	4355	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	9.46077020329245	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTTATGATTGAGGTC	NA	False	NA	3	True	AATAAA	-14	NA	86288631	86338558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ENSMUST00000221372.2	chr12	+	1840	14	FSM	ENSMUSG00000059669.9	ENSMUST00000221372.2	1840	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	59.0833329855924	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGGAAACTTGCAT	NA	False	NA	12	True	ATTAAA	-21	NA	24548628	24608538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ENSMUST00000221374.2	chr12	-	1128	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGCCTTGTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	54909583	54907080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
ENSMUST00000221374.2-0	chr12	-	2686	4	FSM	ENSMUSG00000062929.9	ENSMUST00000221374.2	1128	4	-79	-1479	0	0	multi-exon	FALSE	canonical	3	53	junction_2	123.758725842755	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGCTGTTGAGATG	NA	False	NA	-11	True	AATAAA	-12	NA	54909662	54905601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54908023_54908121_54908199_54908564_54908619_54909528
ENSMUST00000221375.2	chr12	+	1265	8	FSM	ENSMUSG00000021286.9	ENSMUST00000221375.2	1265	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	290.764860465691	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAGTGTATAATTAAAA	NA	False	NA	-19	True	ATTAAA	-22	NA	111780668	111794785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792009_111792067_111793976_111794120_111794251
ENSMUST00000221376.2	chr12	-	3509	3	FSM	ENSMUSG00000041702.8	ENSMUST00000221376.2	3509	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGGTATATCTTTATTG	NA	False	NA	NA	False	NA	NA	NA	102844730	102801891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102804957_102806358_102806547_102844474
ENSMUST00000221397.2	chr12	-	803	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	0	438	0	0	multi-exon	FALSE	canonical	3	180	junction_2	18.0277563773199	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCGCTGGCTTTGAGC	8847	False	NA	-6	True	AATAAA	-19	NA	112905744	112898348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
ENSMUST00000221422.2	chr12	-	302	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	547	12	220	0	multi-exon	FALSE	canonical	3	1653	junction_2	166	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATTTAAAGTGTGATT	NA	False	NA	-9	True	AATAAA	-20	NA	101941966	101934360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101934470_101935751_101935897_101941918
ENSMUST00000221436.2	chr13	-	1600	4	FSM	ENSMUSG00000113623.2	ENSMUST00000221436.2	633	4	0	-967	0	419	multi-exon	FALSE	canonical	3	100	junction_1	23.5372045918796	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACGTATAAAACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	62564857	62549887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62551194_62555228_62555290_62555482_62555610_62564751
ENSMUST00000221438.2	chr12	-	2223	1	FSM	ENSMUSG00000113184.2	ENSMUST00000221438.2	2223	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACCCTTCTCCTTGGA	NA	False	NA	NA	False	AATAAA	-18	NA	81766826	81764603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81764600_81766800
ENSMUST00000221459.2	chr12	+	2807	18	FSM	ENSMUSG00000007411.17	ENSMUST00000221459.2	2807	18	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_16	68.4977205187368	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTCTAAG	1264	False	NA	89	True	TTTAAA	-20	NA	111541484	111622594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ENSMUST00000221462.2	chr13	-	908	1	FSM	ENSMUSG00000114031.2	ENSMUST00000221462.2	908	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCACCACATACTTAAAGG	NA	False	NA	NA	False	NA	NA	NA	65627106	65626198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65626200_65627100
ENSMUST00000221479.2	chr12	+	1026	4	FSM	ENSMUSG00000073079.7	ENSMUST00000221479.2	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_1	150.738183616494	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTCTGTGTGTC	2874	False	NA	NA	False	AATAAA	-16	NA	55127344	55138680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033
ENSMUST00000221482.2	chr13	+	3841	1	FSM	ENSMUSG00000113388.2	ENSMUST00000221482.2	3841	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCCCAAAACCTAAGATAC	NA	False	NA	NA	False	NA	NA	NA	65552109	65555950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_65552100_65556000
ENSMUST00000221488.2	chr12	+	742	5	FSM	ENSMUSG00000021286.9	ENSMUST00000221488.2	742	5	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_1	28.4429253066558	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCCAGACAAGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	111780674	111791759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450
ENSMUST00000221506.2	chr13	-	1288	4	FSM	ENSMUSG00000113204.2	ENSMUST00000221506.2	1288	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	33.95094500403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATACTGGAGAGAAACCT	4826	False	NA	NA	False	NA	NA	NA	74765821	74755255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74765320
ENSMUST00000221506.2-0	chr13	-	3088	4	FSM	ENSMUSG00000113204.2	ENSMUST00000221506.2	1288	4	392	-2192	0	0	multi-exon	FALSE	canonical	3	22	junction_3	33.95094500403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5218	False	NA	-5	True	NA	NA	NA	74765429	74753063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74765320
ENSMUST00000221536.2	chr13	-	4597	7	FSM	ENSMUSG00000016477.19	ENSMUST00000221536.2	4597	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	42.1689722689826	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTGGATGGATTTTCT	NA	False	NA	-3	True	AATAAA	-22	NA	30168374	30090557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30168110
ENSMUST00000221541.2	chr12	+	2362	8	FSM	ENSMUSG00000057469.9	ENSMUST00000221541.2	2362	8	0	0	0	0	multi-exon	FALSE	canonical	2	121	junction_1	60.8859757318245	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7532	False	NA	4	True	ATTAAA	-15	NA	16861099	16876753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ENSMUST00000221559.2	chr12	-	718	5	FSM	ENSMUSG00000021079.17	ENSMUST00000221559.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	64.161417534216	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTGCAAAAATAAACCAC	NA	False	NA	-53	True	NA	NA	NA	71183408	71170069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_71170461_71172235_71172332_71173106_71173172_71178774_71178861_71183328
ENSMUST00000221608.2	chr12	-	529	4	FSM	ENSMUSG00000020949.10	ENSMUST00000221608.2	529	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4797.04304754502	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65113492	65109209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_65109496_65110451_65110550_65112510_65112579_65113415
ENSMUST00000221613.2	chr12	+	1982	8	FSM	ENSMUSG00000011179.9	ENSMUST00000221613.2	1982	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	582.447299884597	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTGTAAATCTTTACC	NA	False	NA	23	True	AATAAA	-18	NA	17597689	17601506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17597808_17597950_17598124_17598309_17598445_17598545_17598645_17599357_17599588_17599668_17599782_17599863_17600079_17600607
ENSMUST00000221618.2	chr13	+	1941	4	FSM	ENSMUSG00000074867.5	ENSMUST00000221618.2	449	4	0	-1492	0	487	multi-exon	FALSE	canonical	3	20	junction_3	4.92160768674447	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTTATGTGTGGACCA	NA	False	NA	NA	False	NA	NA	NA	62367369	62384445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_62367452_62381070_62381198_62381382_62381444_62382774
ENSMUST00000221637.2	chr13	+	452	3	FSM	ENSMUSG00000113081.2	ENSMUST00000221637.2	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_2	20.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATTGCAGGTATCTGAA	NA	False	NA	13	True	NA	NA	NA	62411379	62421101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_62411510_62420579_62420707_62420906
ENSMUST00000221648.2	chr12	+	814	2	FSM	ENSMUSG00000021282.18	ENSMUST00000221648.2	814	2	0	0	0	0	multi-exon	FALSE	canonical	3	1736	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCAGGGTTTGTGTTCCG	NA	False	NA	NA	False	NA	NA	NA	111504649	111505578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111504674_111504788
ENSMUST00000221654.2	chr4	-	1949	11	FSM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	319.717437747771	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACAAGCTGCTGTCTGT	9570	False	NA	NA	False	ATTAAA	-6	NA	117146643	117128668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
ENSMUST00000221657.2	chr4	+	6241	10	FSM	ENSMUSG00000028414.18	ENSMUST00000221657.2	6241	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.3819159423506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTGTTTGTTTTTGA	17	True	NA	5	True	AATAAA	-18	NA	53714187	53765785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_53714547_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ENSMUST00000221659.2	chr13	-	3551	11	FSM	ENSMUSG00000032999.11	ENSMUST00000221659.2	3551	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	15.0253119767944	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCTACTGACTTCTAAT	NA	False	NA	-13	True	ATTAAA	-18	NA	65353782	65324930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65325478_65329342_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353752
ENSMUST00000221694.2	chr13	+	602	2	FSM	ENSMUSG00000087370.4	ENSMUST00000221694.2	602	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGCTGAAATGAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	41759382	41788127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41759789_41787931
ENSMUST00000221699.2	chr13	-	787	3	FSM	ENSMUSG00000015672.5	ENSMUST00000221699.2	1174	3	-2	389	0	71	multi-exon	FALSE	canonical	3	41	junction_2	520.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAATGGATTAATTTGT	NA	False	NA	-12	True	AATAAA	-20	NA	14787612	14784886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14785326_14786007_14786190_14787446
ENSMUST00000221715.2	chr12	+	2367	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	4920	False	NA	14	True	AATAAA	-16	NA	110452171	110538122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUST00000221715.2-0	chr12	+	1589	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	1	777	0	0	multi-exon	FALSE	canonical	3	738	junction_1	90.3704039902189	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	4921	False	NA	13	True	AATAAA	-18	NA	110452172	110537345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUST00000221721.2	chr12	+	8318	36	FSM	ENSMUSG00000021140.10	ENSMUST00000221721.2	8318	36	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	11.0421825704146	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACAGACTTGTCTATGT	NA	False	NA	0	True	AGTAAA	-7	NA	81906796	82043888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81975018_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ENSMUST00000221745.2	chr12	-	329	3	FSM	ENSMUSG00000113123.3	ENSMUST00000221745.2	329	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAGAAGAAATGAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	22673120	22637265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_22637310_22637509_22637637_22672962
ENSMUST00000221747.2	chr13	-	2492	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAGAAGAGGTG	9512	False	NA	NA	False	NA	NA	NA	62614646	62600829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ENSMUST00000221747.2-0	chr13	-	2010	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	26	456	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.5566238822398	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGCATATCACAGTTA	9538	False	NA	-4	True	NA	NA	NA	62614620	62601285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ENSMUST00000221772.2	chr13	+	3012	3	FSM	ENSMUSG00000074867.5	ENSMUST00000221772.2	1379	3	47	-1680	0	519	multi-exon	FALSE	canonical	3	18	junction_2	31.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTGGACCAGTCG	NA	False	NA	NA	False	NA	NA	NA	62277746	62321752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_62277843_62317255_62317383_62318963
ENSMUST00000221807.2	chr13	+	1945	2	FSM	ENSMUSG00000041995.9	ENSMUST00000221807.2	1945	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTGTTCTGCTTGCATG	NA	False	NA	38	True	NA	NA	NA	95460119	95474349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_95460279_95472563
ENSMUST00000221825.2	chr13	-	1301	7	FSM	ENSMUSG00000097715.3	ENSMUST00000221825.2	1301	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	60.7602300485733	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAATTTGTCATTCTT	NA	False	NA	NA	False	AATATA	-42	NA	12665269	12632228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_12632389_12632613_12632739_12634654_12634784_12636246_12636397_12638757_12638981_12645583_12645634_12664805
ENSMUST00000221828.2	chr13	+	569	4	FSM	ENSMUSG00000113760.2	ENSMUST00000221828.2	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	62.055530687352	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACCTTATGAATGTA	NA	False	NA	NA	False	NA	NA	NA	66180022	66188061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_66180131_66186206_66186334_66186533_66186595_66187788
ENSMUST00000221871.2	chr12	-	820	6	FSM	ENSMUSG00000061477.5	ENSMUST00000221871.2	820	6	0	0	0	0	multi-exon	FALSE	canonical	3	10789	junction_4	2615.27425712869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685856	28681082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578
ENSMUST00000221876.2	chr12	+	3676	23	FSM	ENSMUSG00000020590.17	ENSMUST00000221876.2	3676	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	19.5548074873615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTTTTAAAAATATGCT	-4	True	NA	NA	False	AATAAA	-19	NA	35135991	35195386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ENSMUST00000221877.2	chr12	+	1681	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	36	2374	0	0	multi-exon	FALSE	canonical	3	234	junction_3	17.1641887370187	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGCTCTTTGTTTGTTTT	1134	False	NA	7	True	NA	NA	NA	28801837	28917490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUST00000221897.2	chr12	-	1589	3	FSM	ENSMUSG00000021279.6	ENSMUST00000221897.2	1589	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGTTTGTCTGATAG	NA	False	NA	-3	True	AATAAA	-25	NA	111261750	111259409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111260667_111261327_111261399_111261489
ENSMUST00000221904.2	chr13	+	4903	7	FSM	ENSMUSG00000021476.10	ENSMUST00000221904.2	4903	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	8.22090830342568	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCCTTATTCATTTTC	NA	False	NA	NA	False	ATTAAA	-19	NA	64309637	64334351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64332573_64333086
ENSMUST00000221952.2	chr12	+	2700	12	FSM	ENSMUSG00000020646.18	ENSMUST00000221952.2	6792	12	0	4092	0	0	multi-exon	FALSE	canonical	3	26	junction_3	37.4053074415034	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAGATTCTATCTAAACA	NA	False	NA	NA	False	ATTAAA	-31	NA	24881607	25010304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ENSMUST00000221996.2	chr13	-	2458	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	60.1461183748008	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTCCTGGGAAAAAAC	NA	False	NA	1	True	AATAAA	-20	NA	62832759	62819597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ENSMUST00000222003.2	chr13	-	3313	5	FSM	ENSMUSG00000113204.2	ENSMUST00000222003.2	1371	5	250	-2192	0	0	multi-exon	FALSE	canonical	3	38	junction_3	23.1786539729985	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	5218	False	NA	-5	True	NA	NA	NA	74765429	74753063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320
ENSMUST00000222022.2	chr12	+	744	3	FSM	ENSMUSG00000021241.8	ENSMUST00000222022.2	485	3	-48	-211	0	0	multi-exon	FALSE	canonical	3	134	junction_2	92.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820050	84821862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84820146_84820348_84820452_84821316
ENSMUST00000222050.2	chr4	-	2017	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222050.2	2017	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	8.48528137423857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAAATACTGTATTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	62126667	62109225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62110927_62122755_62122888_62123260_62123343_62126565
ENSMUST00000222057.2	chr12	-	1283	3	FSM	ENSMUSG00000114139.2	ENSMUST00000222057.2	1283	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACCAAGGTCTGTGA	NA	False	NA	NA	False	ATTAAA	-7	NA	22883362	22879733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_22880568_22881484_22881591_22883019
ENSMUST00000222064.2	chr13	-	1647	2	FSM	ENSMUSG00000113204.2	ENSMUST00000222064.2	1647	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTCTCTTTCTCAGGAT	5290	False	NA	NA	False	AATATA	-6	NA	74765357	74759457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74761068_74765320
ENSMUST00000222087.4	chr8	-	980	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	19.0065778087482	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTTCCTAGAGTTG	NA	False	NA	-15	True	AATAAA	-18	NA	71219307	71215418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
ENSMUST00000222089.2	chr13	+	1191	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222089.2	478	4	0	-713	0	289	multi-exon	FALSE	canonical	3	66	junction_3	212.90112467737	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTAATGGTGTC	NA	False	NA	7	True	NA	NA	NA	62245561	62260150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259238
ENSMUST00000222092.2	chr13	-	704	5	FSM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	21.3658606192215	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGAACACAGTAGTCTT	NA	False	NA	NA	False	NA	NA	NA	74712375	74702218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857_74711944_74712256
ENSMUST00000222098.2	chr13	-	2447	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	33	6303	0	-154	multi-exon	FALSE	canonical	3	688	junction_6	47.6523871385264	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATAGTTTGATGACT	NA	False	NA	-23	True	AGTAAA	-9	NA	9046086	9022669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ENSMUST00000222130.2	chr13	-	1321	3	FSM	ENSMUSG00000112964.2	ENSMUST00000222130.2	1321	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAGAAATCATATGAAT	4412	False	NA	NA	False	NA	NA	NA	74586968	74583665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74583936_74585699_74585761_74585978
ENSMUST00000222156.2	chr13	-	1469	7	FSM	ENSMUSG00000021569.11	ENSMUST00000222156.2	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	185.430729803761	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74069333	74060576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068568_74069291
ENSMUST00000222159.2	chr12	-	1790	1	FSM	ENSMUSG00000085622.10	ENSMUST00000222159.2	1790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71062369	71060579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_71060600_71062400
ENSMUST00000222166.2	chr12	+	1588	2	FSM	ENSMUSG00000021241.8	ENSMUST00000222166.2	1588	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820050	84821862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84820146_84820369
ENSMUST00000222185.2	chr12	+	5508	16	FSM	ENSMUSG00000041992.10	ENSMUST00000222185.2	5508	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	5.66235129802295	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCTCCTGCCTAGACTCTT	NA	False	NA	NA	False	AATATA	-18	NA	117652570	117723472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
ENSMUST00000222193.2	chr17	-	2902	13	FSM	ENSMUSG00000059811.14	ENSMUST00000222193.2	2902	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	155.463732819659	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGGTTCTGTGGTAG	3823	False	NA	NA	False	ATTAAA	-19	NA	80203480	80156747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80158223_80158315_80158331_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
ENSMUST00000222197.2	chr13	+	4368	17	FSM	ENSMUSG00000021392.9	ENSMUST00000222197.2	4368	17	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_13	21.5653077882046	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCAGAACAGCATCCATT	NA	False	NA	-69	True	NA	NA	NA	49806553	49832214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813495_49814433_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ENSMUST00000222201.2	chr12	-	109	1	FSM	ENSMUSG00000113408.2	ENSMUST00000222201.2	109	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGGTTGTTTAGAAGG	NA	False	NA	NA	False	NA	NA	NA	19345878	19345769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_19345800_19345900
ENSMUST00000222203.2	chr12	-	1706	6	FSM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	66.9943281181325	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTAGTTTTCTATATTTA	NA	False	NA	-49	True	AGTAAA	-18	NA	17050068	17038698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_17039897_17042278_17042321_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ENSMUST00000222206.2	chr12	-	1400	3	FSM	ENSMUSG00000113670.2	ENSMUST00000222206.2	1400	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTGAGTTTCCCATGT	NA	False	NA	NA	False	NA	NA	NA	23010307	23003995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_23004839_23008352_23008459_23009856
ENSMUST00000222222.2	chr12	+	1582	9	FSM	ENSMUSG00000021033.12	ENSMUST00000222222.2	724	9	0	-858	0	0	multi-exon	FALSE	canonical	3	69	junction_1	142.509429512576	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	3847	False	NA	13	True	NA	NA	NA	87204381	87211497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_87204435_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUST00000222232.2	chr12	-	2034	5	FSM	ENSMUSG00000019235.10	ENSMUST00000222232.2	2034	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	53.5957087834465	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTCAGTTCTTCTCAGG	1091	False	NA	-3	True	NA	NA	NA	85186763	85182407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85183258_85183519_85183616_85185204_85185288_85185426_85185520_85185851
ENSMUST00000222247.2	chr12	-	687	3	FSM	ENSMUSG00000011158.9	ENSMUST00000222247.2	687	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	19.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGGTTCAGAGGTTTG	NA	False	NA	NA	False	NA	NA	NA	112964016	112951330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112951713_112956683_112956765_112963792
ENSMUST00000222259.2	chr12	-	642	1	FSM	ENSMUSG00000113625.2	ENSMUST00000222259.2	642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGGCTTCAATAGTTCTC	NA	False	NA	NA	False	AATATA	-45	NA	109861527	109860885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_109860900_109861500
ENSMUST00000222276.2	chr12	+	1802	3	FSM	ENSMUSG00000017843.15	ENSMUST00000222276.2	1802	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	94.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTCTGTGCGTTTTGCA	NA	False	NA	NA	False	ATTAAA	-19	NA	110413553	110417433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110413820_110414405_110414472_110415963
ENSMUST00000222291.2	chr12	+	615	5	FSM	ENSMUSG00000021076.7	ENSMUST00000222291.2	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	20.5836707124847	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGAGATTTAAGCTT	9731	False	NA	NA	False	NA	NA	NA	70984716	70994486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225
ENSMUST00000222305.2	chr13	+	683	4	FSM	ENSMUSG00000063200.5	ENSMUST00000222305.2	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_3	73.1619208787376	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCACATTTCTTTTCT	NA	False	NA	31	True	TATAAA	-31	NA	43554160	43555470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUST00000222310.2	chr12	-	4298	6	FSM	ENSMUSG00000084883.3	ENSMUST00000222310.2	4298	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	9.83056458195561	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGTGTGTAGTGCT	NA	False	NA	-7	True	AATAAA	-19	NA	108241684	108169860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108187967_108188042_108240596
ENSMUST00000222314.2	chr12	-	5770	6	FSM	ENSMUSG00000025323.11	ENSMUST00000222314.2	2677	6	-72	-3021	0	0	multi-exon	FALSE	canonical	2	11	junction_4	4.07921561087423	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCTCATCACGGTGAA	NA	False	NA	NA	False	AATAAA	-15	NA	118265175	118198667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ENSMUST00000222322.2	chr12	-	3303	12	FSM	ENSMUSG00000042724.9	ENSMUST00000222322.2	3303	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.4583834783068	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAAAGGCCAGGGTGG	NA	False	NA	NA	False	NA	NA	NA	81827648	81768812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_81769298_81770837_81771651_81772495_81772609_81774104_81774174_81776456_81776611_81777310_81777434_81778765_81779007_81780853_81781030_81781843_81781993_81790571_81790753_81819453_81819868_81827263
ENSMUST00000222324.2	chr13	+	886	4	FSM	ENSMUSG00000113566.2	ENSMUST00000222324.2	886	4	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	27.9801516952444	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTATGTGTGAAAGCCTG	NA	False	NA	-66	True	NA	NA	NA	62245583	62259791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_62245653_62254561_62254689_62254881_62254943_62259162
ENSMUST00000222364.2	chr13	+	1815	1	FSM	ENSMUSG00000021514.19	ENSMUST00000222364.2	1815	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTGCTGTGATAGCT	NA	False	NA	25	True	AATAAA	-18	NA	65450219	65452034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_65450200_65452000
ENSMUST00000222375.2	chr12	+	3547	12	FSM	ENSMUSG00000021282.18	ENSMUST00000222375.2	3547	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	667.668312267859	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504649	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111504674_111504788_111504983_111505980_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUST00000222395.2	chr12	-	1736	5	FSM	ENSMUSG00000041341.11	ENSMUST00000222395.2	1736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.5744104532117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATTGTTGTATACGTCC	NA	False	NA	-1	True	AATAAA	-18	NA	105589401	105582397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589257
ENSMUST00000222399.2	chr13	+	2430	16	FSM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	38.2023850331654	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCCCGTCCGCTTTGAT	NA	False	NA	28	True	AATAAA	-25	NA	74085929	74109013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUST00000222401.2	chr12	-	1380	4	FSM	ENSMUSG00000113581.2	ENSMUST00000222401.2	1380	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	2.05480466765633	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGTGTACAGTGTGGAC	NA	False	NA	NA	False	AATAAA	-15	NA	110244606	110241821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110242012_110243059_110243861_110243984_110244184_110244416
ENSMUST00000222404.2	chr13	+	3272	1	FSM	ENSMUSG00000113255.2	ENSMUST00000222404.2	3272	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	49646793	49650065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_49646800_49650100
ENSMUST00000222429.2	chr13	-	1653	4	FSM	ENSMUSG00000074865.12	ENSMUST00000222429.2	1653	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	51.4220013439989	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGCATATTTGTGTGT	NA	False	NA	-8	True	ATTAAA	-40	NA	62706421	62634459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62635805_62640180_62640241_62640621_62640749_62706300
ENSMUST00000222435.2	chr13	+	938	1	FSM	ENSMUSG00000062382.10	ENSMUST00000222435.2	938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16782	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAGATAA	7962	False	NA	NA	False	NA	NA	NA	74554527	74555465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_74554500_74555500
ENSMUST00000222455.2	chr13	-	1614	4	FSM	ENSMUSG00000112964.2	ENSMUST00000222455.2	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.29983164553722	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAGAATGCAATCAATGT	6469	False	NA	NA	False	NA	NA	NA	74610838	74595390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700
ENSMUST00000222457.2	chr12	-	723	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	152.938508885107	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTGTAGGAGGTTA	3378	False	NA	-19	True	AATAAA	-8	NA	110855550	110841467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUST00000222460.2	chr12	+	2385	7	FSM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	9.97914491994847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTATTTTGTCCTA	NA	False	NA	NA	False	NA	NA	NA	110816739	110835347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
ENSMUST00000222460.2-0	chr12	+	3495	7	FSM	ENSMUSG00000021271.6	ENSMUST00000222460.2	2385	7	-27	-1083	0	0	multi-exon	FALSE	canonical	3	41	junction_4	9.97914491994847	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTTTCTTGATGTGT	NA	False	NA	13	True	AGTAAA	-16	NA	110816712	110836430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
ENSMUST00000222464.2	chr13	+	4049	5	FSM	ENSMUSG00000021319.8	ENSMUST00000222464.2	4049	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1.80277563773199	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTCAATCTCTGTGTT	NA	False	NA	NA	False	AATGAA	-27	NA	19807273	19817164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235
ENSMUST00000222485.2	chr13	+	3906	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	0	0	0	0	multi-exon	TRUE	canonical	3	407	junction_1	134.848435629472	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTTGTTACCTCAGG	NA	False	NA	NA	False	NA	NA	NA	6598186	6630551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUST00000222499.2	chr13	+	756	7	FSM	ENSMUSG00000063200.5	ENSMUST00000222499.2	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	93.7432960566011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGTGGGTCATGATTT	NA	False	NA	NA	False	AATAAA	-11	NA	43551867	43555111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975
ENSMUST00000222508.2	chr12	-	6459	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.9474565306379	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATCATGTAATCATTA	NA	False	NA	-4	True	NA	NA	NA	65012308	64985606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
ENSMUST00000222509.2	chr13	+	3648	16	FSM	ENSMUSG00000021413.10	ENSMUST00000222509.2	3648	16	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_15	31.0010752501694	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCTTCTTTACCTTT	NA	False	NA	NA	False	CATAAA	-40	NA	35059593	35086658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612
ENSMUST00000222528.2	chr12	-	4724	21	FSM	ENSMUSG00000041415.12	ENSMUST00000222528.2	4724	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	85.5259463554774	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATTTTGGTTTAGTTT	NA	False	NA	-26	True	AATAAA	-29	NA	104688311	104657686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104686875_104686978_104688229
ENSMUST00000222529.2	chr12	-	3181	3	FSM	ENSMUSG00000021248.10	ENSMUST00000222529.2	3181	3	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_2	27.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTGTATTTGTCTGT	NA	False	NA	-1	True	AATAAA	-16	NA	85397694	85387387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85390324_85390998_85391126_85397576
ENSMUST00000222536.2	chr10	-	3978	23	FSM	ENSMUSG00000034602.16	ENSMUST00000222536.2	3978	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	54.1062812381473	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTGCATTTATTTAAA	NA	False	NA	-97	True	AATAAA	-19	NA	122866224	122831063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122845817_122845836_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122858990_122858994_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014
ENSMUST00000222570.2	chr13	-	3011	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	21.3672646822189	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTGTTCTGGGTTC	NA	False	NA	0	True	ATTAAA	-17	NA	64460524	64437610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUST00000222570.2-0	chr13	-	1679	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	0	1332	0	698	multi-exon	FALSE	canonical	3	150	junction_1	21.3672646822189	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGTGGTGAAAGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	64460524	64438942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUST00000222575.2	chr13	+	1835	2	FSM	ENSMUSG00000113424.2	ENSMUST00000222575.2	1835	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTGTTGTGTTCTTC	NA	False	NA	NA	False	NA	NA	NA	30554341	30561166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_30554700_30559689
ENSMUST00000222587.2	chr12	-	2371	11	FSM	ENSMUSG00000021186.10	ENSMUST00000222587.2	2371	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	4.57055795281058	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTTTGGTTAATTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	101784727	101716195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784491
ENSMUST00000222588.2	chr13	-	4765	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_28	16.6207701385947	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74918855	74840486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ENSMUST00000222606.2	chr12	+	2284	12	FSM	ENSMUSG00000042472.12	ENSMUST00000222606.2	2284	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	61.2357590123466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACCTCTTTGGCTCTTGT	1861	False	NA	8	True	AATAAA	-13	NA	84363903	84390494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372376_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUST00000222641.2	chr12	-	3471	12	FSM	ENSMUSG00000021238.12	ENSMUST00000222641.2	3471	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	52.2240880427876	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84495091	84477490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84494904
ENSMUST00000222687.2	chr13	-	3093	3	FSM	ENSMUSG00000021302.11	ENSMUST00000222687.2	762	3	-9	-2322	0	198	multi-exon	FALSE	canonical	2	3	junction_2	137.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14238003	14226231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_14229041_14229734_14229806_14237790
ENSMUST00000222695.2	chr12	+	2253	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	17.7822945651004	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACTGTTCCTTCTCAAT	NA	False	NA	11	True	AATAAA	-24	NA	88327417	88428490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUST00000222705.2	chr12	-	2839	2	FSM	ENSMUSG00000001270.10	ENSMUST00000222705.2	2839	2	0	0	0	0	multi-exon	FALSE	canonical	3	8476	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638716	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_111636176_111636258
ENSMUST00000222717.2	chr12	-	2136	7	FSM	ENSMUSG00000051166.11	ENSMUST00000222717.2	2136	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	7.43863786814047	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATCGCATCAAGGAAGTT	NA	False	NA	NA	False	ATTAAA	-13	NA	98760892	98755407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689
ENSMUST00000222729.2	chr12	+	1317	1	FSM	ENSMUSG00000064326.14	ENSMUST00000222729.2	1317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCCTCCCTTCCATCT	NA	False	NA	20	True	AATAAA	-20	NA	112614265	112615582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112614300_112615600
ENSMUST00000222730.2	chr13	-	4579	7	FSM	ENSMUSG00000016477.19	ENSMUST00000222730.2	4579	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	51.741075451607	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTGGATGGATTTTCT	NA	False	NA	-3	True	AATAAA	-22	NA	30168374	30090557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102761_30104096_30104209_30168110
ENSMUST00000222731.2	chr12	-	5642	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_6	9.17196816392207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACTCAAGTATTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	100691379	100514697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ENSMUST00000222731.2-0	chr12	-	4303	17	FSM	ENSMUSG00000021180.10	ENSMUST00000222731.2	5642	17	0	1339	0	0	multi-exon	FALSE	canonical	3	13	junction_6	9.17196816392207	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGGTCATTTCTAGTA	NA	False	NA	NA	False	AATAAA	-16	NA	100691379	100516036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_100517943_100519259_100519424_100520532_100520693_100524707_100524900_100537087_100537259_100540689_100540784_100541381_100541516_100541893_100542020_100543980_100544143_100547554_100547706_100562073_100562178_100564148_100564233_100582255_100582364_100585784_100585901_100620529_100620749_100644776_100644849_100691039
ENSMUST00000222746.2	chr13	-	2206	3	FSM	ENSMUSG00000074865.12	ENSMUST00000222746.2	2206	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGTGTGGACCAGTCA	NA	False	NA	NA	False	NA	NA	NA	62706443	62664608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_62666545_62668231_62668359_62706300
ENSMUST00000222761.2	chr12	+	3355	2	FSM	ENSMUSG00000042029.8	ENSMUST00000222761.2	3355	2	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTGTTTGGTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	116415799	116427351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_116415987_116424183
ENSMUST00000222800.2	chr13	-	3858	15	FSM	ENSMUSG00000041297.9	ENSMUST00000222800.2	3858	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	23.0479756957844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAACATTATTTTTGTT	NA	False	NA	16	True	AATAAA	-41	NA	17975916	17892044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17974226_17974316_17975890
ENSMUST00000222805.2	chr13	-	1231	8	FSM	ENSMUSG00000057531.15	ENSMUST00000222805.2	1231	8	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	179.905303888871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAATGCCTCTTTGCTTCT	NA	False	NA	NA	False	AATGAA	-20	NA	45155567	45105258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_45105860_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ENSMUST00000222808.2	chr12	-	403	3	FSM	ENSMUSG00000061477.5	ENSMUST00000222808.2	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	12310	junction_1	2151.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28683907	28681081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_28681193_28681622_28681774_28683766
ENSMUST00000222812.2	chr12	-	527	2	FSM	ENSMUSG00000113722.2	ENSMUST00000222812.2	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTCTCGTCTACTC	8338	False	NA	NA	False	NA	NA	NA	104998536	104996875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_104997085_104998218
ENSMUST00000222821.2	chr12	+	783	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_5	10.7637992827812	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTTCCATTCTGTCC	NA	False	NA	7	True	AATAAA	-17	NA	86129360	86209233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUST00000222857.2	chr13	+	4234	5	FSM	ENSMUSG00000000078.8	ENSMUST00000222857.2	1115	5	0	-3119	0	0	multi-exon	FALSE	canonical	3	6	junction_1	94.5119040121402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGATTGTTTTT	NA	False	NA	8	True	CATAAA	-18	NA	5911539	5920393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_5911842_5913556_5913625_5914766_5915344_5916637_5916762_5917230
ENSMUST00000222893.2	chr13	-	1289	1	FSM	ENSMUSG00000113712.2	ENSMUST00000222893.2	1289	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTAGGCTCTCCCAGC	NA	False	NA	NA	False	NA	NA	NA	65910327	65909038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65909000_65910300
ENSMUST00000222929.2	chr13	+	1055	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCAGTTTGCTTCTGAA	NA	False	NA	3	True	AATAAA	-17	NA	63387842	63450096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ENSMUST00000222929.2-0	chr13	+	1647	6	FSM	ENSMUSG00000021458.18	ENSMUST00000222929.2	1055	6	3	-595	0	0	multi-exon	FALSE	canonical	3	67	junction_1	29.9933325924279	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCTGGCCTTGCTTAGA	NA	False	NA	32	True	AATAAA	-32	NA	63387845	63450691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ENSMUST00000222930.2	chr13	-	512	4	FSM	ENSMUSG00000021606.9	ENSMUST00000222930.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1139.1816751023	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCTTCCTTTCATAAA	NA	False	NA	4	True	AATAAA	-26	NA	73476574	73467985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_73468204_73468412_73468536_73475534_73475589_73476457
ENSMUST00000222932.2	chr12	-	770	3	FSM	ENSMUSG00000002804.5	ENSMUST00000222932.2	770	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	14	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCGCTGGCTTTGAGC	NA	False	NA	-6	True	AATAAA	-19	NA	112902624	112898348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_112898671_112901975_112902214_112902414
ENSMUST00000222950.2	chr12	+	599	2	FSM	ENSMUSG00000054894.7	ENSMUST00000222950.2	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTGCAGCTTAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	69771763	69784758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69772329_69784724
ENSMUST00000222968.2	chr12	+	1858	13	FSM	ENSMUSG00000054309.10	ENSMUST00000222968.2	1858	13	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_11	221.93434652317	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCTAAAATTTTATTTA	NA	False	NA	NA	False	TTTAAA	-6	NA	21336399	21358237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355471_21356773_21356883_21357993
ENSMUST00000222982.2	chr12	+	727	4	FSM	ENSMUSG00000021241.8	ENSMUST00000222982.2	727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.0900783783776	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATTTGGAGTTAACCTC	NA	False	NA	-69	True	NA	NA	NA	84820078	84821778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84820146_84820369_84820452_84820566_84820683_84821316
ENSMUST00000222989.2	chr12	-	4103	21	FSM	ENSMUSG00000020593.17	ENSMUST00000222989.2	4103	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_20	37.3187620373452	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTGCTTTACTTTG	7246	False	NA	-25	True	AATGAA	-13	NA	16639767	16587188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16634508_16634653_16639718
ENSMUST00000223007.2	chr13	+	2041	5	FSM	ENSMUSG00000021458.18	ENSMUST00000223007.2	918	5	-442	-681	0	0	multi-exon	FALSE	canonical	2	25	junction_1	45.3231453012696	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCTGGCCTTGCTTAGA	NA	False	NA	32	True	AATAAA	-32	NA	63420629	63450691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ENSMUST00000223033.2	chr13	-	2857	30	FSM	ENSMUSG00000021585.11	ENSMUST00000223033.2	2857	30	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	32.8082020428457	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTACTTTCTTAGGAAT	NA	False	NA	NA	False	NA	NA	NA	74918768	74842361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
ENSMUST00000223063.2	chr13	+	826	2	FSM	ENSMUSG00000057649.7	ENSMUST00000223063.2	826	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTACTATATTTTTAT	NA	False	NA	NA	False	AAAACA	-39	NA	74086228	74087270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_74086768_74086983
ENSMUST00000223065.2	chr13	+	2046	8	FSM	ENSMUSG00000021326.14	ENSMUST00000223065.2	2046	8	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_5	261.483054432026	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTTTGTTTTTGTTAT	1222	False	NA	21	True	AATAAA	-23	NA	21364393	21377033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374266_21374295_21375389_21375417_21376199
ENSMUST00000223093.2	chr13	-	2351	8	FSM	ENSMUSG00000021306.12	ENSMUST00000223093.2	2351	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	66.0247325335169	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCAGACTCCTGACAGC	NA	False	NA	NA	False	AATAAA	-26	NA	13568149	13533019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_13534009_13535412_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUST00000223095.2	chr12	-	470	2	FSM	ENSMUSG00000062929.9	ENSMUST00000223095.2	470	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAAAGAGTCTAAGAA	NA	False	NA	NA	False	NA	NA	NA	54909401	54908354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54908619_54909195
ENSMUST00000223101.2	chr13	-	2728	14	FSM	ENSMUSG00000034617.8	ENSMUST00000223101.2	2728	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_10	83.6727918422384	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAAAAAGAACT	NA	False	NA	-90	True	NA	NA	NA	68730232	68709481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ENSMUST00000223117.2	chr13	-	794	2	FSM	ENSMUSG00000113238.2	ENSMUST00000223117.2	794	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTGCCTCTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	65401517	65400517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_65400959_65401164
ENSMUST00000223127.2	chr4	-	2283	14	FSM	ENSMUSG00000034645.15	ENSMUST00000223127.2	2283	14	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_8	15.5010974988431	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGCGGCCTTTCAGGGGT	5669	False	NA	-114	True	NA	NA	NA	108075119	108038934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_108039111_108040844_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108061791_108062544_108067252_108067419_108075029
ENSMUST00000223150.2	chr12	+	4187	9	FSM	ENSMUSG00000021171.9	ENSMUST00000223150.2	4187	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	17.7125485179293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTAATATGTTTTTTGTT	NA	False	NA	5	True	AATAAA	-18	NA	116320538	116336711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ENSMUST00000223153.2	chr12	-	405	2	FSM	ENSMUSG00000061477.5	ENSMUST00000223153.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	12310	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGTAGTAACTTGTC	NA	False	NA	-10	True	AATAAA	-16	NA	28681916	28681081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_28681193_28681622
ENSMUST00000223163.3	chr13	-	4153	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGCTTTTGGTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	74538955	74517444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
ENSMUST00000223163.3-0	chr13	-	2564	5	FSM	ENSMUSG00000069184.5	ENSMUST00000223163.3	4153	5	0	1589	0	511	multi-exon	FALSE	canonical	3	29	junction_1	7.88590514779375	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTGTTGTATATTAG	NA	False	NA	NA	False	AATAAA	-17	NA	74538955	74519033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74520947_74523086_74523183_74524554_74524682_74526730_74526986_74538782
ENSMUST00000223166.2	chr12	+	6386	21	FSM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	35.8941499411812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTGACAGGTGTCCTA	NA	False	NA	9	True	AATAAA	-17	NA	65012713	65069347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65037714_65037865_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUST00000223167.2	chr12	-	1109	3	FSM	ENSMUSG00000020949.10	ENSMUST00000223167.2	1109	3	0	0	0	0	multi-exon	FALSE	canonical	3	9641	junction_1	150.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65113216	65109209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_65109515_65110451_65110550_65112510
ENSMUST00000223194.2	chr13	+	1398	9	FSM	ENSMUSG00000054021.7	ENSMUST00000223194.2	1398	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	63.0811729044411	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTATTTTTTTGTACTTT	NA	False	NA	10	True	ATTAAA	-22	NA	43518981	43548679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43548212
ENSMUST00000223204.2	chr13	+	1754	4	FSM	ENSMUSG00000021458.18	ENSMUST00000223204.2	1754	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	47.8632310744781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTTCTGTGTAATGTTT	NA	False	NA	NA	False	ATTAAA	-31	NA	63420629	63447482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_63421223_63429955_63430073_63444671_63444759_63446525
ENSMUST00000223206.2	chr13	-	5141	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCTTGGCTATGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74956929	74840486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ENSMUST00000223206.2-0	chr13	-	2706	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	140	2295	140	0	multi-exon	FALSE	canonical	3	49	junction_27	33.4677691410694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCTGTATTGAGT	NA	False	NA	-6	True	AATGAA	-13	NA	74956789	74842781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ENSMUST00000223211.2	chr12	+	1297	8	FSM	ENSMUSG00000021286.9	ENSMUST00000223211.2	794	8	27	-530	0	0	multi-exon	FALSE	canonical	3	188	junction_5	258.732309855699	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	16	True	ATTAAA	-17	NA	111780668	111794820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
ENSMUST00000223227.2	chr12	-	403	1	FSM	ENSMUSG00000113113.2	ENSMUST00000223227.2	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATCTGTTATGCCATA	NA	False	NA	NA	False	AAAACA	-13	NA	100711194	100710791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_100710800_100711200
ENSMUST00000223237.2	chr6	-	1081	2	FSM	ENSMUSG00000048668.17	ENSMUST00000223237.2	1081	2	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	3985	False	NA	-12	True	AATAAA	-36	NA	128336320	128334327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_128335157_128336068
ENSMUST00000223239.2	chr12	+	1933	6	FSM	ENSMUSG00000021037.8	ENSMUST00000223239.2	1933	6	0	0	0	0	multi-exon	FALSE	canonical	3	2699	junction_4	132.214068842919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGACAGCCTTGTG	NA	False	NA	17	True	AGTAAA	-35	NA	87316075	87320772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUST00000223282.2	chr12	-	7595	44	FSM	ENSMUSG00000051166.11	ENSMUST00000223282.2	7595	44	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	10.6988876966176	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCATCAAGGAAGTTTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	98867743	98755403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768717_98771725_98771747_98776777_98776877_98782193_98782324_98784078_98784158_98786119_98786129_98787858_98787874_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ENSMUST00000223291.2	chr12	+	2005	13	FSM	ENSMUSG00000021222.10	ENSMUST00000223291.2	2005	13	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_8	22.5331545850898	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTTTGCCAAAGTATA	NA	False	NA	15	True	NA	NA	NA	83572773	83588694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ENSMUST00000223320.2	chr12	-	1160	2	FSM	ENSMUSG00000062929.9	ENSMUST00000223320.2	1160	2	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGTGTACACTACTGTA	NA	False	NA	NA	False	AAGAAA	-28	NA	54908523	54907264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54908023_54908121
ENSMUST00000223321.2	chr12	-	2957	6	FSM	ENSMUSG00000021009.16	ENSMUST00000223321.2	2957	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	9.06421535489973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCGTGTTCCTGTTGCA	NA	False	NA	0	True	ATTAAA	-15	NA	98650009	98643000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736
ENSMUST00000223348.2	chr13	-	682	2	FSM	ENSMUSG00000113559.2	ENSMUST00000223348.2	682	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCATGAATGTTATCAAT	NA	False	NA	NA	False	NA	NA	NA	66127200	66124440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66125065_66127142
ENSMUST00000223375.2	chr12	-	2361	1	FSM	ENSMUSG00000021248.10	ENSMUST00000223375.2	2361	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	8621	False	NA	NA	False	AATGAA	-14	NA	85421464	85419103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_85419100_85421500
ENSMUST00000223387.2	chr12	-	438	4	FSM	ENSMUSG00000020988.10	ENSMUST00000223387.2	438	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	275.076151072551	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCAGGCCTTGTATGA	NA	False	NA	NA	False	AAGAAA	-6	NA	69771547	69759494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69759528_69768085_69768238_69768851_69768985_69771427
ENSMUST00000223396.2	chr13	+	4303	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	0	0	0	0	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGTGCTTTTTTCTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	3588062	3617871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUST00000223396.2-0	chr13	+	2187	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	65	2051	0	0	multi-exon	FALSE	canonical	3	1666	junction_3	147.697833430284	2258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3588127	3615820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUST00000223403.2	chr12	-	734	5	FSM	ENSMUSG00000113123.3	ENSMUST00000223403.2	734	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.32290411644765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTCTATGAATGTAAT	NA	False	NA	NA	False	NA	NA	NA	22673346	22635889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_22635913_22637248_22637310_22637509_22637637_22646429_22646569_22672962
ENSMUST00000223407.2	chr12	-	702	4	FSM	ENSMUSG00000021276.11	ENSMUST00000223407.2	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	192.582449875372	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGCTCTTTCTTTTTT	3370	False	NA	-2	True	AATACA	-15	NA	110855558	110845129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110845474_110846118_110846249_110850323_110850493_110855499
ENSMUST00000223410.2	chr12	+	3900	3	FSM	ENSMUSG00000021096.12	ENSMUST00000223410.2	3900	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	26.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCACTAGAACCATGTAG	NA	False	NA	-63	True	NA	NA	NA	72808088	72836174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_72808406_72830456_72831311_72833445
ENSMUST00000223428.2	chr13	+	607	1	FSM	ENSMUSG00000113061.2	ENSMUST00000223428.2	607	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAAAAAATTTAGTAATA	NA	False	NA	-4	True	AATAAA	-15	NA	28441510	28442117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_28441500_28442100
ENSMUST00000223436.2	chr12	-	400	1	FSM	ENSMUSG00000114096.2	ENSMUST00000223436.2	400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGACTTGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	19867368	19866968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_19867000_19867400
ENSMUST00000223450.2	chr12	-	2726	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGAGATGTGTTTACT	NA	False	NA	-3	True	AATAAA	-20	NA	54909583	54905593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
ENSMUST00000223450.2-0	chr12	-	1239	4	FSM	ENSMUSG00000062929.9	ENSMUST00000223450.2	2726	4	0	1487	0	0	multi-exon	FALSE	canonical	3	31	junction_2	134.037308239162	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGCCTTGTTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	54909583	54907080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_54908023_54908121_54908199_54908453_54908619_54909528
ENSMUST00000223470.3	chr13	-	1306	3	FSM	ENSMUSG00000113346.3	ENSMUST00000223470.3	1306	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	10.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTCCTGAGTTCAAATCC	NA	False	NA	0	True	NA	NA	NA	73495503	73492783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_73493358_73494614_73495181_73495337
ENSMUST00000223490.2	chr13	-	5638	14	FSM	ENSMUSG00000041297.9	ENSMUST00000223490.2	12548	14	-235	7145	-235	0	multi-exon	FALSE	canonical	3	30	junction_2	13.284773505807	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAACATTATTTTTGTT	NA	False	NA	16	True	AATAAA	-41	NA	17979917	17892044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_17893497_17893940_17894211_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ENSMUST00000223496.2	chr13	-	685	2	FSM	ENSMUSG00000037960.12	ENSMUST00000223496.2	685	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49357592	49356425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_49356712_49357193
ENSMUST00000223502.2	chr12	+	3223	24	FSM	ENSMUSG00000021143.11	ENSMUST00000223502.2	3223	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	23.2409910997097	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATCTTTCTAATGCTC	1379	False	NA	14	True	AATAAA	-30	NA	112978127	113035758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUST00000223502.2-0	chr12	+	5486	24	FSM	ENSMUSG00000021143.11	ENSMUST00000223502.2	3223	24	0	-2263	0	0	multi-exon	FALSE	canonical	3	14	junction_13	23.2409910997097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGGGGCCATGCGG	1379	False	NA	28	True	AATAAA	-40	NA	112978127	113038021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024832_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUST00000223509.2	chr12	-	492	2	FSM	ENSMUSG00000021182.17	ENSMUST00000223509.2	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGGCCGGCGTGGTAT	NA	False	NA	NA	False	NA	NA	NA	100888873	100887785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_100887855_100888450
ENSMUST00000223510.2	chr12	+	680	1	FSM	ENSMUSG00000113600.2	ENSMUST00000223510.2	680	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGCTGTACTTTAAAAC	1027	False	NA	NA	False	AAGAAA	-28	NA	69169874	69170554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_69169900_69170600
ENSMUST00000223544.2	chr12	-	1098	1	FSM	ENSMUSG00000021079.17	ENSMUST00000223544.2	1098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTTGTCTGTTCATCCC	NA	False	NA	NA	False	NA	NA	NA	71183409	71182311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_71182300_71183400
ENSMUST00000223551.2	chr12	+	2992	4	FSM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	44	1281	0	-1281	multi-exon	FALSE	canonical	3	7	junction_3	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGGAGTGCCAATG	NA	False	NA	NA	False	AATAAA	-15	NA	4893346	4908762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4907806
ENSMUST00000223554.2	chr12	-	8157	12	FSM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_10	26.1040511722473	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTGAGTTGGACATAGTC	NA	False	NA	-12	True	AATAAA	-15	NA	102844665	102747055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102807297_102807451_102844474
ENSMUST00000223558.2	chr14	+	289	2	FSM	ENSMUSG00000039197.11	ENSMUST00000223558.2	289	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGATGATCCATTTTA	NA	False	NA	4	True	AATAAA	-15	NA	21102678	21103988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21102769_21103789
ENSMUST00000223585.2	chr14	-	3704	18	FSM	ENSMUSG00000035161.8	ENSMUST00000223585.2	10883	18	-26	7205	0	-7205	multi-exon	FALSE	canonical	3	25	junction_12	114.295797874483	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998587	62930457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951289_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ENSMUST00000223586.2	chr19	+	4975	10	FSM	ENSMUSG00000024743.17	ENSMUST00000223586.2	1344	10	-458	-3173	-65	-1563	multi-exon	FALSE	canonical	2	4	junction_3	24.2827988705514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCCTTGGCTGTTTCCTCT	NA	False	NA	17	True	AATAAA	-17	NA	10366388	10428981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10366878_10390703_10390808_10395326_10395407_10399120_10399253_10412913_10413050_10416515_10416787_10420191_10420362_10420740_10420856_10421348_10421549_10425703
ENSMUST00000223595.2	chr18	+	402	2	FSM	ENSMUSG00000024276.8	ENSMUST00000223595.2	402	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGAGCTATTTCAGCC	NA	False	NA	NA	False	NA	NA	NA	24087915	24089472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24088241_24089395
ENSMUST00000223596.2	chr14	-	4987	2	FSM	ENSMUSG00000114797.2	ENSMUST00000223596.2	4987	2	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAAACATTGTC	NA	False	NA	NA	False	NA	NA	NA	60469586	60461436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_60466360_60469522
ENSMUST00000223599.2	chr13	-	3877	2	FSM	ENSMUSG00000058093.14	ENSMUST00000223599.2	3877	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACAAATGTCAGACT	NA	False	NA	NA	False	AATAAA	-30	NA	67757764	67738230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67742035_67757691
ENSMUST00000223606.2	chr13	+	1887	2	FSM	ENSMUSG00000021661.17	ENSMUST00000223606.2	1887	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTGAGTTACTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	98399664	98404225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_98399985_98402658
ENSMUST00000223625.2	chr19	-	1420	3	FSM	ENSMUSG00000024982.11	ENSMUST00000223625.2	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTAGACCTCTGGTG	9109	False	NA	NA	False	AATAGA	-34	NA	55302794	55298950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_55300217_55301620_55301713_55302732
ENSMUST00000223633.2	chr14	+	2438	11	FSM	ENSMUSG00000021957.8	ENSMUST00000223633.2	2438	11	0	0	0	0	multi-exon	FALSE	canonical	3	1855	junction_1	165.575994636904	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30281646	30295581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUST00000223674.2	chr13	+	2063	3	FSM	ENSMUSG00000047789.6	ENSMUST00000223674.2	2063	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCAAGCTTCAGTTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	112797314	112810219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_112797407_112806120_112806266_112808393
ENSMUST00000223682.2	chr13	-	1819	5	FSM	ENSMUSG00000069206.15	ENSMUST00000223682.2	483	5	-9	-1327	0	347	multi-exon	FALSE	canonical	3	19	junction_1	43.3618495915476	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGAGCTTACATTCCA	9951	False	NA	NA	False	AAGAAA	-28	NA	67599730	67590026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67591454_67595482_67595552_67596939_67597036_67597468_67597596_67599630
ENSMUST00000223683.2	chr19	+	2398	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223683.2	2398	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	313.587042674491	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	47	False	NA	14	True	ATTAAA	-14	NA	46064470	46072900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000223689.2	chr14	-	2945	18	FSM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	0	1317	0	0	multi-exon	FALSE	canonical	3	74	junction_15	12.2471661858887	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTCTTGTCATGTT	7526	False	NA	NA	False	AATAAA	-20	NA	27230417	27204363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ENSMUST00000223722.2	chr13	-	3264	7	FSM	ENSMUSG00000094870.9	ENSMUST00000223722.2	3109	7	-228	73	-228	-73	multi-exon	FALSE	canonical	3	13	junction_6	57.4207182895589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	2	True	AATAAA	-23	NA	120252653	120226796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252355
ENSMUST00000223728.2	chr19	+	3523	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	265.145819419344	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCAGAGTTATGTCGT	244	False	NA	13	True	AATAAA	-16	NA	46064408	46073969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000223737.2	chr14	+	1057	1	FSM	ENSMUSG00000022043.20	ENSMUST00000223737.2	1057	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-16	NA	66534514	66535571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_66534500_66535600
ENSMUST00000223762.2	chr14	-	2292	5	FSM	ENSMUSG00000033111.17	ENSMUST00000223762.2	2292	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	58.5683361552981	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCAGAAAAAGCTTTGT	NA	False	NA	-8	True	ATTAAA	-45	NA	10185541	10166639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185505
ENSMUST00000223768.2	chr19	+	1121	4	FSM	ENSMUSG00000025157.9	ENSMUST00000223768.2	1121	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	14.7648230602334	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCATCAGGCTTGCC	NA	False	NA	NA	False	NA	NA	NA	41928442	41932214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUST00000223804.2	chr13	+	1136	2	FSM	ENSMUSG00000035958.4	ENSMUST00000223804.2	1136	2	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAGAGATTTTCTCCT	NA	False	NA	NA	False	NA	NA	NA	25015674	25016890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_25015913_25015992
ENSMUST00000223813.2	chr13	-	2561	8	FSM	ENSMUSG00000094870.9	ENSMUST00000223813.2	2561	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	43.7488192260485	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	120252268	120227327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
ENSMUST00000223814.2	chr13	+	3740	4	FSM	ENSMUSG00000021431.16	ENSMUST00000223814.2	3740	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	12.8149218578274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGAAAAAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	38388914	38398417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042
ENSMUST00000223822.2	chr13	-	379	3	FSM	ENSMUSG00000021546.19	ENSMUST00000223822.2	379	3	0	0	0	0	multi-exon	FALSE	canonical	1	253	junction_2	3507.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTTTAAAATTT	5212	False	NA	57	True	NA	NA	NA	58549869	58547706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58547805_58548146_58548232_58549673
ENSMUST00000223827.2	chr13	+	2632	12	FSM	ENSMUSG00000035762.12	ENSMUST00000223827.2	2632	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	68.3415099589633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370432	84443989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432305_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ENSMUST00000223831.2	chr13	-	2101	5	FSM	ENSMUSG00000021327.20	ENSMUST00000223831.2	2101	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.4477722226294	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGGTTCTTACTTGGG	NA	False	NA	2	True	AATAAA	-23	NA	21586901	21571172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21586841
ENSMUST00000223859.2	chr17	-	5588	28	FSM	ENSMUSG00000013236.18	ENSMUST00000223859.2	5588	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	79.1614661493084	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGGAGTGCTCCTTAAT	NA	False	NA	0	True	ATTAAA	-21	NA	56783439	56719425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ENSMUST00000223870.2	chr13	+	2057	10	FSM	ENSMUSG00000021692.10	ENSMUST00000223870.2	3338	10	-23	1304	0	-840	multi-exon	FALSE	canonical	3	551	junction_4	41.347966346456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083662	107095428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_107083792_107084093_107084168_107085208_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUST00000223881.2	chr13	-	3917	16	FSM	ENSMUSG00000021375.12	ENSMUST00000223881.2	3917	16	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	16.4059609762902	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAAAGTGTTGATCGTC	NA	False	NA	-6	True	AATACA	-16	NA	46940114	46902570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988
ENSMUST00000223902.2	chr13	+	2116	5	FSM	ENSMUSG00000033991.10	ENSMUST00000223902.2	2116	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.425903332032	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTCATGTACTATAGTT	NA	False	NA	NA	False	NA	NA	NA	76328543	76338225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_76328636_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ENSMUST00000223907.2	chr19	+	5423	32	FSM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	62.1311593110583	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAAGGCTCTTAAACT	NA	False	NA	13	True	AATAAA	-24	NA	34899791	34953145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ENSMUST00000223920.2	chr19	+	4151	9	FSM	ENSMUSG00000039126.11	ENSMUST00000223920.2	1803	9	0	-2348	0	0	multi-exon	FALSE	canonical	3	57	junction_3	14.3352711868315	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGTTTCCTCTTTCA	NA	False	NA	2	True	AATAAA	-14	NA	17114129	17201296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_17114256_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
ENSMUST00000223921.2	chr14	-	601	4	FSM	ENSMUSG00000041028.17	ENSMUST00000223921.2	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	5046	junction_1	285.925786797126	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATTAGTCATAGATTTA	NA	False	NA	NA	False	NA	NA	NA	36857229	36853354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUST00000223934.2	chr19	-	3448	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	0	0	0	0	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTATTTTTGGAAACCT	NA	False	NA	4	True	AATAAA	-29	NA	23251261	23186086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ENSMUST00000223934.2-0	chr19	-	5641	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	79	-2272	0	0	multi-exon	FALSE	canonical	2	185	junction_5	71.1727842464471	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTATTTAAGATGAGAGTA	NA	False	NA	-11	True	AATAAA	-23	NA	23251182	23183814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ENSMUST00000223939.2	chr14	+	2769	4	FSM	ENSMUSG00000025290.18	ENSMUST00000223939.2	2769	4	0	0	0	0	multi-exon	FALSE	canonical	3	9630	junction_1	1522.07774659071	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTCCTACACGTCTG	NA	False	NA	4	True	AATAAA	-3	NA	24540796	24545913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450
ENSMUST00000223950.2	chr14	-	1164	3	FSM	ENSMUSG00000021811.8	ENSMUST00000223950.2	1164	3	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20438944	20437529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20438280_20438367_20438509_20438671
ENSMUST00000223982.2	chr17	-	4802	31	FSM	ENSMUSG00000033278.11	ENSMUST00000223982.2	4802	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	2.09337579574768	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTATTTTGCTTTGCAT	NA	False	NA	NA	False	NA	NA	NA	67661382	66974537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_66974677_66984995_66985132_66990365_66990530_66992608_66992735_66995245_66995378_66996338_66996513_66997419_66997570_67000457_67000594_67000766_67000922_67005360_67005478_67032734_67032833_67051714_67051752_67054095_67054173_67069123_67069212_67116460_67116649_67121461_67121537_67124820_67124973_67197918_67198052_67226018_67226056_67227017_67227292_67247477_67247581_67251122_67251325_67260062_67260173_67263804_67264114_67349089_67349384_67352978_67353154_67370036_67370153_67382583_67382663_67402418_67402691_67498243_67498367_67660951
ENSMUST00000223993.2	chr13	-	3269	2	FSM	ENSMUSG00000042364.12	ENSMUST00000223993.2	3269	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGCTTGTCTTTTA	NA	False	NA	-6	True	AATAAA	-15	NA	113750177	113728720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_113731399_113749586
ENSMUST00000224015.2	chr14	+	844	9	FSM	ENSMUSG00000053453.10	ENSMUST00000224015.2	844	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	279.504472236134	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAACGGAAATGTATCCC	NA	False	NA	-84	True	NA	NA	NA	8508550	8520645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_8508579_8512131_8512210_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUST00000224041.2	chr13	+	463	3	FSM	ENSMUSG00000114616.2	ENSMUST00000224041.2	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	12	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGCATGTGAACCTTGA	NA	False	NA	NA	False	NA	NA	NA	66392083	66453227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_66392214_66448255_66448445_66453083
ENSMUST00000224047.2	chr18	+	2838	16	FSM	ENSMUSG00000024561.12	ENSMUST00000224047.2	2838	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	21.6794833886788	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74401361	74415756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74408974_74409143_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ENSMUST00000224056.3	chr18	+	4113	17	FSM	ENSMUSG00000032688.10	ENSMUST00000224056.3	4113	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	7.09643396361863	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGATGTCAGCTTACA	NA	False	NA	NA	False	NA	NA	NA	65564008	65610876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65582645_65582679_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ENSMUST00000224069.2	chr14	+	1818	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	100.003199948802	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGGATTTTTTTTCTGTC	NA	False	NA	9	True	AATAAA	-12	NA	21126219	21498630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUST00000224076.2	chr14	+	816	2	FSM	ENSMUSG00000021737.5	ENSMUST00000224076.2	816	2	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCTGGAAGTTATGGGCT	NA	False	NA	NA	False	NA	NA	NA	8349126	8352958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_8349777_8352792
ENSMUST00000224118.2	chr13	+	1997	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224118.2	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_15	96.0563723376365	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGAGCTCGGGGCTTTAT	116	False	NA	NA	False	NA	NA	NA	55593273	55607868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ENSMUST00000224118.2-0	chr13	+	2992	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224118.2	1997	16	-123	-872	0	0	multi-exon	FALSE	canonical	3	104	junction_15	96.0563723376365	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ENSMUST00000224125.2	chr13	-	705	5	FSM	ENSMUSG00000021494.10	ENSMUST00000224125.2	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_4	40.4498145854836	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACCCGAGGAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	55684323	55683103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ENSMUST00000224132.2	chr14	+	419	2	FSM	ENSMUSG00000063787.5	ENSMUST00000224132.2	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	1953	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACCAAAAAAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	20753166	20753677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20753266_20753357
ENSMUST00000224159.2	chr18	+	1145	8	FSM	ENSMUSG00000024561.12	ENSMUST00000224159.2	1145	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	10.2379844955251	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGGTTTGCCCTGCCTCG	NA	False	NA	NA	False	ATTAAA	-37	NA	74401360	74407949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715
ENSMUST00000224162.2	chr14	-	3996	1	FSM	ENSMUSG00000022034.11	ENSMUST00000224162.2	3996	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	8519	False	NA	NA	False	NA	NA	NA	66069268	66065272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_66065300_66069300
ENSMUST00000224164.2	chr14	+	2877	4	FSM	ENSMUSG00000021987.10	ENSMUST00000224164.2	2877	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	4.02768199119819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTGTTTTTCTTTT	NA	False	NA	9	True	ATTAAA	-13	NA	60533703	60539819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUST00000224182.2	chr13	-	2754	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	0	0	0	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	4751	False	NA	-19	True	AATAAA	-19	NA	58550330	58539048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000224182.2-0	chr13	-	2039	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	0	715	0	0	multi-exon	FALSE	canonical	3	4568	junction_3	976.692573035253	2182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUST00000224188.2	chr13	+	3464	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	180.959553491934	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTATGCCTGTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	120151999	120169796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUST00000224196.2	chr14	+	565	2	FSM	ENSMUSG00000012405.17	ENSMUST00000224196.2	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	16172	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTCTGCTTAAAGGT	NA	False	NA	-3	True	AATAAA	-12	NA	4199576	4200731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_4199790_4200379
ENSMUST00000224209.2	chr14	-	2477	8	FSM	ENSMUSG00000037824.7	ENSMUST00000224209.2	2477	8	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	25.0591137846786	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTTGGTGATAAATTGA	NA	False	NA	47	True	ATTAAA	-16	NA	40656278	40628403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144
ENSMUST00000224253.2	chr13	-	1563	3	FSM	ENSMUSG00000114353.2	ENSMUST00000224253.2	1563	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTCAATGCAATAAAGCC	NA	False	NA	NA	False	NA	NA	NA	66943088	66940133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66941512_66942702_66942764_66942964
ENSMUST00000224263.2	chr14	+	4105	19	FSM	ENSMUSG00000021806.5	ENSMUST00000224263.2	4105	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	511.410048448719	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	7020	False	NA	24	True	AATAAA	-16	NA	19818304	19861855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19856579_19856679_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUST00000224269.2	chr13	-	981	1	FSM	ENSMUSG00000114629.2	ENSMUST00000224269.2	981	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAACCAATGTGGTAAAG	NA	False	NA	NA	False	NA	NA	NA	66545591	66544610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66544600_66545600
ENSMUST00000224272.2	chr19	+	2978	22	FSM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	11.2769706937285	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGTGCTTTTGTGCG	2256	False	NA	6	True	AATAAA	-14	NA	8907256	8918946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ENSMUST00000224273.2	chr13	-	817	5	FSM	ENSMUSG00000021552.8	ENSMUST00000224273.2	817	5	0	0	0	0	multi-exon	FALSE	canonical	2	68	junction_1	38.6328875441637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTCCTCACCTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	58411792	58398533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755
ENSMUST00000224284.3	chr18	+	1955	20	FSM	ENSMUSG00000024474.8	ENSMUST00000224284.3	1955	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	168.043095646503	747	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTCTGTGTTGGGCA	NA	False	NA	6	True	ATTAAA	-16	NA	36877744	36890688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUST00000224286.2	chr14	-	801	3	FSM	ENSMUSG00000049960.5	ENSMUST00000224286.2	801	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	790	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACGGTCCTCTGGCATAG	8678	False	NA	-36	True	AATAAA	-14	NA	20443551	20441294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20441529_20441960_20442222_20443245
ENSMUST00000224300.2	chr13	+	4250	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	12	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	289	False	NA	27	True	AATAAA	-29	NA	81805781	81820990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81806056_81813123_81813389_81817279
ENSMUST00000224313.2	chr14	+	519	1	FSM	ENSMUSG00000021967.5	ENSMUST00000224313.2	519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTGTCTCATACGGAA	NA	False	NA	25	True	ATTAAA	-17	NA	58063886	58064405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_58063900_58064400
ENSMUST00000224379.2	chr17	+	2158	5	FSM	ENSMUSG00000003198.11	ENSMUST00000224379.2	895	5	0	-1263	0	0	multi-exon	FALSE	canonical	3	14	junction_1	13.1624465810882	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATATTTATGTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	56199092	56205928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56199187_56199757_56199861_56202820_56202948_56203140_56203202_56204155
ENSMUST00000224386.2	chr13	+	6976	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_18	35.3654766990177	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGGTTACATTTGTGA	NA	False	NA	3	True	ATTAAA	-16	NA	76246852	76338435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ENSMUST00000224387.2	chr18	+	1425	4	FSM	ENSMUSG00000024542.10	ENSMUST00000224387.2	1425	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	11.1455023315337	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	113	False	NA	NA	False	NA	NA	NA	67933182	67938447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435
ENSMUST00000224388.2	chr13	-	1508	1	FSM	ENSMUSG00000114434.2	ENSMUST00000224388.2	1508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGCTAGGTTGGCAGC	NA	False	NA	NA	False	NA	NA	NA	66699284	66697776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66697800_66699300
ENSMUST00000224404.2	chr17	-	1095	7	FSM	ENSMUSG00000012296.17	ENSMUST00000224404.2	1095	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	166.328406740667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGGCTGCCCTAGCAC	5854	False	NA	NA	False	NA	NA	NA	46593904	46571238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593885
ENSMUST00000224410.2	chr14	-	2653	11	FSM	ENSMUSG00000021814.18	ENSMUST00000224410.2	2653	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	245.372471968638	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAAAT	8203	False	NA	NA	False	AATATA	-32	NA	20529976	20508859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ENSMUST00000224463.2	chr13	+	658	4	FSM	ENSMUSG00000049517.9	ENSMUST00000224463.2	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9398.7280108652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAATATTTTGTGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	91071335	91072842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_91071526_91071705_91071866_91072444_91072566_91072655
ENSMUST00000224467.3	chr18	+	1910	10	FSM	ENSMUSG00000034391.13	ENSMUST00000224467.3	1910	10	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_3	71.0602248487546	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTGGTGTCTTATTT	800	False	NA	26	True	AATAAA	-15	NA	84952906	84999598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_84953306_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ENSMUST00000224479.2	chr13	+	4212	2	FSM	ENSMUSG00000035367.10	ENSMUST00000224479.2	4212	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58552879	58557910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_58554905_58555723
ENSMUST00000224480.2	chr13	-	4186	19	FSM	ENSMUSG00000035248.10	ENSMUST00000224480.2	4186	19	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	15.1738892041641	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCCACATTATTTTCT	NA	False	NA	-4	True	AATAAA	-21	NA	59957320	59919689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191
ENSMUST00000224486.2	chr13	-	4786	5	FSM	ENSMUSG00000021495.11	ENSMUST00000224486.2	4786	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	31.8943568676341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55700142	55687131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930
ENSMUST00000224487.2	chr13	-	533	2	FSM	ENSMUSG00000001707.9	ENSMUST00000224487.2	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	1400	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAACAAGAGCAT	NA	False	NA	NA	False	AATAAA	-20	NA	38842986	38839787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_38840217_38842882
ENSMUST00000224496.2	chr13	-	504	3	FSM	ENSMUSG00000055560.9	ENSMUST00000224496.2	504	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCATGGCTCTTCATTTT	NA	False	NA	NA	False	NA	NA	NA	67569527	67561012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67561323_67561952_67562080_67569460
ENSMUST00000224497.2	chr17	+	4141	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_22	18.327114778237	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGATCAAGTATGAGA	NA	False	NA	28	True	ATTAAA	-23	NA	66430607	66459169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ENSMUST00000224500.2	chr13	+	1009	10	FSM	ENSMUSG00000021714.16	ENSMUST00000224500.2	1353	10	344	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	127.2119840616	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	False	NA	10	True	AATAAA	-21	NA	104365462	104386125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370741_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ENSMUST00000224503.2	chr14	+	8865	40	FSM	ENSMUSG00000060012.10	ENSMUST00000224503.2	8865	40	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_37	14.1361837027482	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCGAGGTCAAGCATAA	NA	False	NA	10	True	AATAAA	-20	NA	64890050	65047066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_64890106_64907072_64907167_64945940_64945954_64951522_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65037793_65037857_65040422_65041180_65043479
ENSMUST00000224536.2	chr13	-	570	2	FSM	ENSMUSG00000114689.2	ENSMUST00000224536.2	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCTCCATCTTTGAACA	NA	False	NA	-6	True	ATTAAA	-23	NA	98853018	98849581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98850076_98852942
ENSMUST00000224551.2	chr13	+	4056	16	FSM	ENSMUSG00000021500.18	ENSMUST00000224551.2	4056	16	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_8	34.3631585665036	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTTAAACTTTCTTTG	NA	False	NA	10	True	NA	NA	NA	55782840	55817663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524
ENSMUST00000224565.2	chr13	+	725	1	FSM	ENSMUSG00000114825.2	ENSMUST00000224565.2	725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGAACAACAATGACAC	NA	False	NA	NA	False	NA	NA	NA	66546589	66547314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_66546600_66547300
ENSMUST00000224568.2	chr14	+	714	6	FSM	ENSMUSG00000025290.18	ENSMUST00000224568.2	714	6	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	4812.24305288085	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTGAGAGGACAAATAAA	NA	False	NA	-18	True	NA	NA	NA	24540834	24545891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ENSMUST00000224611.2	chr13	+	1750	8	FSM	ENSMUSG00000021420.14	ENSMUST00000224611.2	1750	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.637524751798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGCATTTGTCTTTTATT	NA	False	NA	13	True	AATAAA	-24	NA	36301857	36721571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_36301989_36332343_36332428_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUST00000224629.2	chr14	+	1274	8	FSM	ENSMUSG00000034532.10	ENSMUST00000224629.2	3781	8	37	2470	0	0	multi-exon	FALSE	canonical	2	16	junction_5	3.88087934491604	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTACTGTGAAAGGTCCT	2575	False	NA	NA	False	ATTAAA	-17	NA	65504103	65558950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_65504233_65508148_65508285_65524580_65524617_65531232_65531440_65532841_65533007_65536634_65536865_65540548_65540652_65558682
ENSMUST00000224645.2	chr13	-	1602	9	FSM	ENSMUSG00000021432.16	ENSMUST00000224645.2	802	9	-30	-770	0	0	multi-exon	FALSE	canonical	3	22	junction_7	12.4473892845046	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAAGGTGGGAAGAAC	NA	False	NA	NA	False	AATAAA	-15	NA	39144513	39116115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139796_39139913_39144407
ENSMUST00000224662.2	chr13	-	2734	8	FSM	ENSMUSG00000021720.12	ENSMUST00000224662.2	2734	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.8070158058105	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTATTGTTTTTTGA	NA	False	NA	NA	False	AATAAA	-12	NA	105430937	105267083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_105268072_105304035_105304162_105317957_105318184_105383170_105383207_105386118_105387076_105388759_105388859_105407412_105407548_105430770
ENSMUST00000224685.2	chr13	-	454	3	FSM	ENSMUSG00000034789.9	ENSMUST00000224685.2	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	310	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGCACTGGGTGTCAAA	7851	False	NA	-17	True	AATAAA	-19	NA	55468349	55467692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55468050_55468124_55468188_55468315
ENSMUST00000224698.2	chr14	-	1985	18	FSM	ENSMUSG00000022040.9	ENSMUST00000224698.2	1985	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	50.8642946534033	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGTGTTCTTGAGA	NA	False	NA	-2	True	AATAAA	-19	NA	66349835	66321822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_66322210_66322379_66322439_66322744_66322826_66323682_66323753_66324413_66324517_66325748_66325783_66326954_66327030_66330247_66330360_66332186_66332273_66333134_66333162_66336252_66336288_66339041_66339121_66339595_66339692_66341174_66341244_66344662_66344786_66345425_66345617_66347564_66347725_66349637
ENSMUST00000224699.2	chr14	+	750	2	FSM	ENSMUSG00000025290.18	ENSMUST00000224699.2	750	2	0	0	0	0	multi-exon	FALSE	canonical	3	12376	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGATGTCATCTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	24541216	24542057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_24541884_24541974
ENSMUST00000224705.2	chr13	+	769	3	FSM	ENSMUSG00000021537.10	ENSMUST00000224705.2	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	1314	junction_1	39.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCACTTTTAATCTATTT	NA	False	NA	NA	False	ACTAAA	-18	NA	81932825	81940658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81932896_81934961_81935077_81940074
ENSMUST00000224707.2	chr19	-	1255	7	FSM	ENSMUSG00000024889.6	ENSMUST00000224707.2	1255	7	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_6	96.5361187443447	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	False	NA	-9	True	ATTAAA	-21	NA	4675361	4672618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675121_4675220
ENSMUST00000224711.2	chr17	+	2066	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCAAGGCCTTCTT	9841	False	NA	16	True	AATAAA	-20	NA	74645981	74695481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUST00000224711.2-0	chr17	+	4814	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	-119	-2629	-119	0	multi-exon	FALSE	canonical	3	146	junction_1	31.4552633711753	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9722	False	NA	33	True	AATAAA	-24	NA	74645862	74698110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUST00000224715.2	chr18	+	2032	7	FSM	ENSMUSG00000038773.12	ENSMUST00000224715.2	2032	7	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_6	14.229273425661	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTAAGTCGTATTTTTCT	NA	False	NA	27	True	AATAAA	-36	NA	34910118	34937686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502
ENSMUST00000224721.2	chr14	+	1774	8	FSM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-70	2779	0	496	multi-exon	FALSE	canonical	3	134	junction_7	47.5106862308097	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398257	20418631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
ENSMUST00000224726.3	chr19	+	4061	21	FSM	ENSMUSG00000024892.18	ENSMUST00000224726.3	4061	21	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	10.9748576300561	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGTCATGTACAGTCTAC	1701	False	NA	10	True	AATAAA	-25	NA	4560513	4671707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUST00000224751.2	chr14	+	5951	26	FSM	ENSMUSG00000021819.12	ENSMUST00000224751.2	5951	26	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_11	15.0973375136148	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGGTCTTTGCCTTC	NA	False	NA	17	True	TATAAA	-25	NA	20757720	20773687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766131_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ENSMUST00000224765.2	chr13	-	2199	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_9	44.9861089671023	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684471	55678228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ENSMUST00000224774.2	chr14	+	233	1	FSM	ENSMUSG00000114938.2	ENSMUST00000224774.2	233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGGAGCCCTGGCCA	NA	False	NA	NA	False	NA	NA	NA	42365428	42365661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_42365400_42365700
ENSMUST00000224858.2	chr13	+	3515	6	FSM	ENSMUSG00000042348.11	ENSMUST00000224858.2	1966	6	-88	-1461	0	0	multi-exon	FALSE	canonical	3	25	junction_1	177.959995504608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCCTGACTGACTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	113931040	114293997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_113931233_114037538_114037690_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ENSMUST00000224864.2	chr14	+	1914	4	FSM	ENSMUSG00000021748.10	ENSMUST00000224864.2	1914	4	0	0	0	0	multi-exon	FALSE	canonical	3	2463	junction_1	144.03008944893	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAAAAGACAGC	NA	False	NA	NA	False	NA	NA	NA	14296747	14298918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_14296883_14296955_14298351_14298443_14298507_14298597
ENSMUST00000224867.2	chr13	-	660	1	FSM	ENSMUSG00000114251.2	ENSMUST00000224867.2	660	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCAGTCTTCTGTCC	NA	False	NA	NA	False	AAGAAA	-13	NA	36175503	36174843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_36174800_36175500
ENSMUST00000224897.2	chr19	-	2168	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_6	59.8815497461447	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTGTTTTTAGTT	7439	False	NA	-7	True	AATAAA	-38	NA	55304464	55286732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ENSMUST00000224898.2	chr13	-	3416	3	FSM	ENSMUSG00000114816.2	ENSMUST00000224898.2	3416	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	12	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCTCCCAGCCTGAAG	8594	False	NA	NA	False	NA	NA	NA	67002935	66997714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_67000944_67002549_67002611_67002809
ENSMUST00000224905.2	chr17	+	1906	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_3	17.6823829464998	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTTTTGGTTGGCAT	NA	False	NA	9	True	ATTAAA	-19	NA	45874799	45878596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ENSMUST00000224917.2	chr13	-	464	4	FSM	ENSMUSG00000114353.2	ENSMUST00000224917.2	464	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	5.73488351136175	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATACTGGAGAGAAACCTT	NA	False	NA	NA	False	NA	NA	NA	66950624	66941415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66941596_66942701_66942763_66942962_66943090_66950528
ENSMUST00000224930.2	chr14	+	2716	6	FSM	ENSMUSG00000039599.17	ENSMUST00000224930.2	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	79.7004391455907	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCAGTTAAATGTTCTC	NA	False	NA	7	True	NA	NA	NA	20398229	20415312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330
ENSMUST00000224947.2	chr17	+	2016	14	FSM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_12	68.855048845232	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGAGTCTGCACCGC	NA	False	NA	13	True	ATTAAA	-23	NA	57556454	57570427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
ENSMUST00000224952.3	chr14	-	7297	26	FSM	ENSMUSG00000021733.12	ENSMUST00000224952.3	7297	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	33.2781249471781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTTGGCTGTTGTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	7750979	7669822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7721970_7722031_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7750872
ENSMUST00000224964.2	chr14	-	3348	4	FSM	ENSMUSG00000034190.10	ENSMUST00000224964.2	3348	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69958685	69954448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_69955750_69955963_69956147_69956577_69957317_69957560
ENSMUST00000224975.2	chr14	-	2727	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTTTTGACCTAGAGTA	8200	False	NA	-1	True	AATAAA	-24	NA	20529979	20505344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ENSMUST00000224975.2-0	chr14	-	1866	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	-30	891	0	361	multi-exon	FALSE	canonical	3	93	junction_12	241.43268845696	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8170	False	NA	-18	True	AATAAA	-19	NA	20530009	20506235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ENSMUST00000224981.2	chr14	+	3618	10	FSM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	14.3716112484489	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	27058022	27125868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ENSMUST00000224995.2	chr13	+	2971	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224995.2	2971	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	161.603135283117	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	1	True	NA	28	True	AATACA	-30	NA	55593158	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599530_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ENSMUST00000225023.2	chr14	+	512	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	0	1101	0	0	multi-exon	FALSE	canonical	3	4092	junction_4	3560.754932244	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540785	24545926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ENSMUST00000225035.2	chr13	-	571	4	FSM	ENSMUSG00000021764.9	ENSMUST00000225035.2	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	707.770364517256	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524599	114425183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114524494
ENSMUST00000225036.2	chr14	-	3115	8	FSM	ENSMUSG00000034190.10	ENSMUST00000225036.2	3115	8	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_5	16.4788051875178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69969990	69954448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_69955750_69955963_69956147_69956577_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ENSMUST00000225039.2	chr14	+	1401	8	FSM	ENSMUSG00000021957.8	ENSMUST00000225039.2	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	2015	junction_2	113.794838662052	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCAGACTCTTTTTTTTT	NA	False	NA	38	True	AATATA	-21	NA	30289955	30295581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUST00000225063.2	chr13	-	2718	3	FSM	ENSMUSG00000049625.7	ENSMUST00000225063.2	2718	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGCCATCAGCTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	56326698	56322295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_56324447_56324717_56324946_56326359
ENSMUST00000225069.2	chr13	+	2414	11	FSM	ENSMUSG00000035762.12	ENSMUST00000225069.2	2414	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	81.3373223065525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACAGAGTGTAATTTATT	NA	False	NA	17	True	ATTAAA	-18	NA	84370444	84443985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ENSMUST00000225080.2	chr17	-	2412	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_7	91.006850915633	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCTTAATTTCTTTCTC	5833	False	NA	-33	True	AATAAA	-15	NA	46593925	46568802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ENSMUST00000225086.2	chr13	-	2022	9	FSM	ENSMUSG00000021629.11	ENSMUST00000225086.2	2022	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	86.5641922217264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGGTAGTATTTGCAAA	NA	False	NA	-13	True	AATAAA	-10	NA	100951149	100939164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949972_100950015_100950190_100950480_100951103
ENSMUST00000225094.2	chr13	-	1927	15	FSM	ENSMUSG00000041685.17	ENSMUST00000225094.2	1927	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.8157462016366	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATTAG	NA	False	NA	NA	False	NA	NA	NA	98951661	98887742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98888440_98888841_98888854_98891587_98891764_98892075_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ENSMUST00000225103.2	chr14	-	2579	5	FSM	ENSMUSG00000021982.15	ENSMUST00000225103.2	2579	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	7.29297607290741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATAGGGTCGTTTTG	NA	False	NA	NA	False	TATAAA	-37	NA	59835395	59822021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUST00000225111.2	chr14	-	2936	14	FSM	ENSMUSG00000114797.2	ENSMUST00000225111.2	2936	14	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	24.6028814399438	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGTTTCTGGTAGCT	NA	False	NA	NA	False	CATAAA	-15	NA	60488894	60457865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ENSMUST00000225118.2	chr14	-	761	3	FSM	ENSMUSG00000021814.18	ENSMUST00000225118.2	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_1	21	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTCTTGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	20521504	20517413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_20518004_20519455_20519558_20521435
ENSMUST00000225138.2	chr13	+	1421	6	FSM	ENSMUSG00000035958.4	ENSMUST00000225138.2	1421	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	326.497534447046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAGTAGATGACAGCTG	NA	False	NA	NA	False	AAAAAG	-15	NA	25015678	25025788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_25015913_25015992_25016079_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUST00000225138.2-0	chr13	+	1785	6	FSM	ENSMUSG00000035958.4	ENSMUST00000225138.2	1421	6	-17	-347	0	0	multi-exon	FALSE	canonical	3	8	junction_2	326.497534447046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	20	True	AATAAA	-20	NA	25015661	25026135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_25015913_25015992_25016079_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUST00000225139.2	chr14	+	3038	4	FSM	ENSMUSG00000040651.10	ENSMUST00000225139.2	3038	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	126.720164141308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	NA	False	NA	16	True	AATAAA	-20	NA	27199126	27205512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_27199178_27201585_27201765_27201880_27202049_27202872
ENSMUST00000225141.2	chr19	+	1209	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	12.1837779216647	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCCTTGTTCCAGG	NA	False	NA	17	True	AATAAA	-17	NA	5510643	5515079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ENSMUST00000225148.2	chr19	-	2379	22	FSM	ENSMUSG00000025006.19	ENSMUST00000225148.2	2379	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	20.9264991660559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	9966	False	NA	NA	False	NA	NA	NA	40502117	40283214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40502114
ENSMUST00000225150.2	chr13	-	1342	1	FSM	ENSMUSG00000114547.2	ENSMUST00000225150.2	1342	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	611	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTCCATTCCTTGAG	NA	False	NA	NA	False	NA	NA	NA	112731618	112730276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_112730300_112731600
ENSMUST00000225202.2	chr14	+	741	8	FSM	ENSMUSG00000053453.10	ENSMUST00000225202.2	741	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	284.788500111782	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCCAAAGTTACTGCCTA	NA	False	NA	NA	False	NA	NA	NA	8508550	8519644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_8508579_8512131_8512304_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561
ENSMUST00000225210.2	chr19	+	4163	6	FSM	ENSMUSG00000024780.8	ENSMUST00000225210.2	4163	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	18.3019124683734	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGTAG	3836	False	NA	NA	False	ATTAAA	-27	NA	28967766	28992536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288
ENSMUST00000225234.2	chr14	-	1958	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	23.7589940005541	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGTGAATTCAGTGAA	NA	False	NA	NA	False	AGTAAA	-18	NA	14466854	14413107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
ENSMUST00000225251.2	chr14	-	2192	11	FSM	ENSMUSG00000022052.10	ENSMUST00000225251.2	2192	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	291.951776839943	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAATCTGGTTTTCTTT	NA	False	NA	-5	True	AATAAA	-13	NA	67309631	67253122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67299885_67299948_67307683_67307759_67309538
ENSMUST00000225263.2	chr13	+	165	2	FSM	ENSMUSG00000114458.2	ENSMUST00000225263.2	165	2	0	0	0	0	multi-exon	TRUE	canonical	1	49	junction_1	0	3052	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGTAAAAC	NA	False	NA	NA	False	NA	NA	NA	98937679	98940244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_98937719_98940118
ENSMUST00000225292.2	chr13	+	1563	1	FSM	ENSMUSG00000062822.9	ENSMUST00000225292.2	1563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	119599311	119600874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_119599300_119600900
ENSMUST00000225294.2	chr14	-	1191	5	FSM	ENSMUSG00000033111.17	ENSMUST00000225294.2	1191	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	54.4196655631032	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGCCCTCTTGAGTCTC	NA	False	NA	-8	True	AATAAA	-18	NA	10185505	10167783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
ENSMUST00000225310.2	chr19	+	4079	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	62.7147421974203	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTATCTGTAACATTTCT	3821	False	NA	NA	False	ATTAAA	-28	NA	28967751	28993171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ENSMUST00000225333.2	chr13	-	660	6	FSM	ENSMUSG00000021556.13	ENSMUST00000225333.2	660	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	180.062655761821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCTGGGCCTGCTCTGGC	NA	False	NA	NA	False	NA	NA	NA	59823586	59792905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59793037_59797376_59797475_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ENSMUST00000225334.2	chr13	+	1804	4	FSM	ENSMUSG00000058900.6	ENSMUST00000225334.2	397	4	-17	-1390	0	-842	multi-exon	FALSE	canonical	3	9	junction_1	8.28653526310404	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAGCTTCTAGAGTCTT	NA	False	NA	NA	False	NA	NA	NA	67321245	67331266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67321373_67324511_67324639_67325128_67325225_67329812
ENSMUST00000225355.2	chr14	-	2771	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_14	90.9467493893531	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCGTCGTGTGGTGCTTT	3467	False	NA	NA	False	AATAAA	-16	NA	65830501	65767897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
ENSMUST00000225357.2	chr17	+	2118	11	FSM	ENSMUSG00000036368.9	ENSMUST00000225357.2	2118	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.75862284482674	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTGCAATCCTCTGGT	3580	False	NA	NA	False	GATAAA	-31	NA	79922490	79989678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79922798_79928734_79929202_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379_79975458_79977985_79978085_79979778_79979833_79979921_79980003_79989061
ENSMUST00000225361.2	chr14	+	1609	11	FSM	ENSMUSG00000000365.10	ENSMUST00000225361.2	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_4	33.16700167335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCCTGCCTCTTGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	56640156	56679370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987
ENSMUST00000225396.2	chr13	-	2486	5	FSM	ENSMUSG00000021432.16	ENSMUST00000225396.2	2486	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	7.22409163839994	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATTCACTTTGCAAAG	NA	False	NA	NA	False	AATAAA	-21	NA	39127128	39116694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034
ENSMUST00000225411.2	chr19	+	1626	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	28.4843470118477	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACCCAAAATGCC	NA	False	NA	-6	True	AATAAA	-6	NA	36387147	36433592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ENSMUST00000225413.2	chr17	-	2189	8	FSM	ENSMUSG00000012296.17	ENSMUST00000225413.2	2189	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	149.381035869855	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	NA	False	NA	-30	True	AATAAA	-18	NA	46574713	46568799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614
ENSMUST00000225420.2	chr13	-	2662	3	FSM	ENSMUSG00000021362.8	ENSMUST00000225420.2	2662	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAATCTCTTCAAGAGT	NA	False	NA	NA	False	NA	NA	NA	41259159	41254902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_41257166_41258044_41258171_41258886
ENSMUST00000225455.2	chr13	+	906	2	FSM	ENSMUSG00000114388.2	ENSMUST00000225455.2	906	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTAGTGTGGTTAATTG	NA	False	NA	4	True	AATAAA	-16	NA	41330363	41332506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_41330421_41331657
ENSMUST00000225476.2	chr19	-	1455	8	FSM	ENSMUSG00000024889.6	ENSMUST00000225476.2	1455	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	109.573011722592	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGGAACCTTGGGAC	NA	False	NA	-9	True	ATTAAA	-21	NA	4675669	4672618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674687_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUST00000225490.2	chr13	+	1771	6	FSM	ENSMUSG00000035958.4	ENSMUST00000225490.2	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_4	61.475198251002	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	20	True	AATAAA	-20	NA	25015926	25026135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUST00000225495.2	chr19	-	1711	11	FSM	ENSMUSG00000024982.11	ENSMUST00000225495.2	1711	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	163.592298107215	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTGAAAAATCCAGCTG	7475	False	NA	NA	False	NA	NA	NA	55304428	55285343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_55285511_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ENSMUST00000225518.2	chr14	+	2044	3	FSM	ENSMUSG00000021962.10	ENSMUST00000225518.2	2044	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGAAAATAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	30201591	30208236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30201774_30204149_30204191_30206415
ENSMUST00000225545.2	chr13	+	4405	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTCTCATAATTATGGT	NA	False	NA	8	True	NA	NA	NA	21546989	21556459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
ENSMUST00000225545.2-0	chr13	+	1935	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	12	2458	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.0277457017791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATACTGTCCTTTGTGTGT	NA	False	NA	15	True	CATAAA	-20	NA	21547001	21554001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
ENSMUST00000225550.2	chr13	+	3967	8	FSM	ENSMUSG00000021696.10	ENSMUST00000225550.2	2351	8	-6	-1610	0	0	multi-exon	FALSE	canonical	3	9	junction_3	34.299997025049	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTCATGTCTAACT	NA	False	NA	NA	False	NA	NA	NA	108350937	108422217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108351035_108393200_108393333_108403723_108403869_108407166_108407248_108408338_108408396_108410819_108410926_108416110_108416248_108419005
ENSMUST00000225576.2	chr13	-	2499	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225576.2	2499	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTTACATGCCTGCAA	NA	False	NA	NA	False	NA	NA	NA	59970947	59967926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59969925_59970446
ENSMUST00000225578.2	chr13	-	763	2	FSM	ENSMUSG00000069089.9	ENSMUST00000225578.2	763	2	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCTGCCTCCCAAGTGC	NA	False	NA	NA	False	NA	NA	NA	100855878	100853496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100854191_100855809
ENSMUST00000225605.2	chr13	+	1539	4	FSM	ENSMUSG00000071252.7	ENSMUST00000225605.2	1539	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	17.5562587763516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACAATGTTTTTTCATT	NA	False	NA	NA	False	AATAAA	-20	NA	77283672	77341833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672
ENSMUST00000225630.3	chr14	-	7347	25	FSM	ENSMUSG00000021733.12	ENSMUST00000225630.3	3663	25	-54	-3630	0	0	multi-exon	TRUE	canonical	0	0	junction_19	22.1114208172057	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTTGGCTGTTGTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	7766738	7669822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ENSMUST00000225633.2	chr14	-	6013	7	FSM	ENSMUSG00000021978.10	ENSMUST00000225633.2	6013	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	60.1904385171672	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335554	65289511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317965_65335445
ENSMUST00000225639.2	chr14	+	1269	1	FSM	ENSMUSG00000021939.9	ENSMUST00000225639.2	1269	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAACTCA	NA	False	NA	NA	False	NA	NA	NA	63359962	63361231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_63360000_63361200
ENSMUST00000225653.2	chr14	-	2765	18	FSM	ENSMUSG00000033885.16	ENSMUST00000225653.2	2765	18	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	21.2781870861862	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGTTGTAGCTTTGC	NA	False	NA	-6	True	AATAAA	-11	NA	14371518	14304661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_14305839_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ENSMUST00000225661.3	chr18	-	5194	29	FSM	ENSMUSG00000033382.16	ENSMUST00000225661.3	5194	29	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_23	36.8553951689739	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCCTAGTTTCCTG	NA	False	NA	-22	True	AATAAA	-19	NA	21029150	20950279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ENSMUST00000225674.2	chr13	-	2704	16	FSM	ENSMUSG00000021546.19	ENSMUST00000225674.2	2704	16	0	0	0	0	multi-exon	FALSE	canonical	3	1429	junction_15	1661.36162897252	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5126	False	NA	-23	True	AATAAA	-15	NA	58549955	58539052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ENSMUST00000225699.2	chr14	-	2455	7	FSM	ENSMUSG00000040123.18	ENSMUST00000225699.2	2455	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	29.1547594742265	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAAAGAAGGAAA	8840	False	NA	NA	False	NA	NA	NA	57049154	57030784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57031958_57034060_57034268_57035141_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57049048
ENSMUST00000225705.2	chr19	-	1882	6	FSM	ENSMUSG00000024908.16	ENSMUST00000225705.2	1882	6	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_3	41.6048074145284	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	8364	False	NA	NA	False	NA	NA	NA	3546530	3533527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521
ENSMUST00000225714.2	chr13	-	821	7	FSM	ENSMUSG00000021432.16	ENSMUST00000225714.2	821	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	8.07086667520217	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTCCCTCACTGGATA	NA	False	NA	NA	False	NA	NA	NA	39144489	39121299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39138084_39138207_39139624_39139913_39144407
ENSMUST00000225735.2	chr14	+	2377	1	FSM	ENSMUSG00000021748.10	ENSMUST00000225735.2	2377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAGGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	14296810	14299187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_14296800_14299200
ENSMUST00000225750.2	chr14	+	864	1	FSM	ENSMUSG00000114902.2	ENSMUST00000225750.2	864	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATGTGCCGGAACAAT	NA	False	NA	NA	False	NA	NA	NA	61796246	61797110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_61796200_61797100
ENSMUST00000225754.2	chr13	-	3111	7	FSM	ENSMUSG00000021636.16	ENSMUST00000225754.2	3111	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3.97562014729219	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGCTCCTTA	NA	False	NA	-3	True	ATTAAA	-16	NA	100753210	100732466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100744284_100744321_100747940_100749093_100753112
ENSMUST00000225780.2	chr19	+	2978	13	FSM	ENSMUSG00000015176.12	ENSMUST00000225780.2	2978	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	314.758494281286	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATGGTTGAGTCACT	215	False	NA	NA	False	NA	NA	NA	46064379	46073392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000225791.2	chr14	+	3976	17	FSM	ENSMUSG00000021806.5	ENSMUST00000225791.2	3976	17	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_14	123.598391979831	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTAGACCCGCTGCT	NA	False	NA	NA	False	AATAAA	-23	NA	19801351	19856198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910
ENSMUST00000225804.2	chr14	+	3422	2	FSM	ENSMUSG00000039357.3	ENSMUST00000225804.2	3422	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCAAAAAAAAAAAGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	20745044	20750263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20746482_20748278
ENSMUST00000225815.2	chr13	+	2447	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTGAAAGAATGTT	NA	False	NA	16	True	AATAAA	-29	NA	58550513	58557906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
ENSMUST00000225815.2-0	chr13	+	3584	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	-81	-1056	-81	0	multi-exon	FALSE	canonical	1	2	junction_2	162.181653983701	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCGTGGTCATGGTGTC	NA	False	NA	9	True	NA	NA	NA	58550432	58558962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
ENSMUST00000225818.2	chr13	-	1596	4	FSM	ENSMUSG00000005312.16	ENSMUST00000225818.2	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_3	315.370681368238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCAGATCATTTGCGC	NA	False	NA	-12	True	AATAAA	-7	NA	58329439	58325332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635
ENSMUST00000225824.2	chr13	+	1634	12	FSM	ENSMUSG00000021373.17	ENSMUST00000225824.2	1634	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.3787723228011	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATATTTAACATTTGA	NA	False	NA	NA	False	AAAACA	-32	NA	46655641	46802002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_46655804_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ENSMUST00000225828.2	chr13	+	2531	3	FSM	ENSMUSG00000035367.10	ENSMUST00000225828.2	3594	3	15	1048	0	0	multi-exon	FALSE	canonical	3	21	junction_1	177.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58550076	58557910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_58550332_58554815_58554905_58555723
ENSMUST00000225843.2	chr17	+	2238	16	FSM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_6	179.285421108974	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAACAGCTTTTATTGG	NA	False	NA	NA	False	TATAAA	-16	NA	56386698	56407598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUST00000225850.2	chr13	-	1918	3	FSM	ENSMUSG00000044792.8	ENSMUST00000225850.2	1918	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	208.5	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGTTCCTTTTCTTGTT	NA	False	NA	1	True	ATTAAA	-21	NA	59917602	59903224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_59904818_59910449_59910610_59917437
ENSMUST00000225868.2	chr13	-	3081	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGAGGTGTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	93328893	93282789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUST00000225868.2-0	chr13	-	1952	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	0	1129	0	207	multi-exon	FALSE	canonical	3	122	junction_9	113.762104088007	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTATTTTTGAAA	NA	False	NA	NA	False	AATAAA	-12	NA	93328893	93283918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUST00000225901.2	chr13	-	1217	1	FSM	ENSMUSG00000114551.2	ENSMUST00000225901.2	1217	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCCAGGACCACTTTGT	NA	False	NA	NA	False	AATAAA	-28	NA	115666308	115665091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_115665100_115666300
ENSMUST00000225922.2	chr13	-	2722	15	FSM	ENSMUSG00000021629.11	ENSMUST00000225922.2	2722	15	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_8	66.4080229355165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCTGTATATAAAACT	NA	False	NA	0	True	AATAAA	-15	NA	100969848	100939354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ENSMUST00000225925.2	chr13	+	2769	16	FSM	ENSMUSG00000074886.12	ENSMUST00000225925.2	2769	16	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_8	142.105125406041	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTGCCTCCTTTTATT	112	False	NA	26	True	AATACA	-28	NA	55593269	55608738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55600049_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ENSMUST00000225945.2	chr13	-	2764	10	FSM	ENSMUSG00000041685.17	ENSMUST00000225945.2	2764	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	16.5916831761363	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCTTTGAGATTCTCAA	5221	False	NA	NA	False	AATAAA	-19	NA	98885828	98861690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723
ENSMUST00000225972.2	chr13	+	2097	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	82	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	108181022	108185706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108181243_108182958_108183103_108183973
ENSMUST00000225977.2	chr17	+	3188	20	FSM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_19	11.3154222706638	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTTACCCCAGATTAGA	NA	False	NA	NA	False	NA	NA	NA	69463839	69596319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ENSMUST00000225980.2	chr18	-	5150	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTCAGTCCTACAAGGGA	9746	False	NA	NA	False	AATAAA	-17	NA	80977273	80777604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ENSMUST00000225980.2-0	chr18	-	4467	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	-2	685	0	0	multi-exon	FALSE	canonical	3	102	junction_24	14.8266772117982	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGACCTGAGCGCCT	9744	False	NA	-30	True	AATAAA	-24	NA	80977275	80778289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ENSMUST00000225992.2	chr13	+	616	3	FSM	ENSMUSG00000071252.7	ENSMUST00000225992.2	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGTGACTTACACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	77283669	77332123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_77283750_77322971_77323104_77331719
ENSMUST00000226010.2	chr13	+	1898	3	FSM	ENSMUSG00000050002.15	ENSMUST00000226010.2	1898	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58305462	58309744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_58305551_58307690_58307722_58307965
ENSMUST00000226042.2	chr13	+	2061	3	FSM	ENSMUSG00000071180.6	ENSMUST00000226042.2	1092	3	-36	-933	0	0	multi-exon	FALSE	canonical	3	16	junction_1	87.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCCTGAGTTTTTGTCT	NA	False	NA	NA	False	AATAAA	-44	NA	108180983	108185706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108181168_108182958_108183103_108183973
ENSMUST00000226053.2	chr17	+	2270	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_6	104.875926694356	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	False	NA	NA	False	TATAAA	-10	NA	56386633	56407592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUST00000226059.2	chr13	+	5009	27	FSM	ENSMUSG00000021559.15	ENSMUST00000226059.2	5009	27	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_26	11.2282004438423	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACCCCCCCCCCCCCAT	9821	False	NA	NA	False	NA	NA	NA	60749760	60910616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_60749925_60750238_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60898944_60899143_60900027_60900167_60901922_60902044_60905162_60905352_60908448_60909678_60910170
ENSMUST00000226068.2	chr19	-	6633	54	FSM	ENSMUSG00000048612.17	ENSMUST00000226068.2	6633	54	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_16	23.3368693179296	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTGGTATTTTGTAT	8904	False	NA	-83	True	NA	NA	NA	38031799	37887757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37915443_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ENSMUST00000226072.2	chr14	+	578	3	FSM	ENSMUSG00000063787.5	ENSMUST00000226072.2	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	962	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCCATTTCTTCTAATT	NA	False	NA	33	True	AATAAA	-16	NA	20753125	20754493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_20753266_20753343_20753477_20754188
ENSMUST00000226086.2	chr17	+	850	4	FSM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	186.912338335976	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGCCAGCTCTAATGG	NA	False	NA	7	True	AATAAA	-16	NA	45874885	45876981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45876589
ENSMUST00000226089.2	chr14	-	750	2	FSM	ENSMUSG00000021785.9	ENSMUST00000226089.2	750	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCTACTCTCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	6209201	6198777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_6199289_6208962
ENSMUST00000226100.2	chr13	+	1476	8	FSM	ENSMUSG00000021661.17	ENSMUST00000226100.2	1476	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	57.4651624722247	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	14	True	AATAAA	-24	NA	98399646	98410426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_98399985_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ENSMUST00000226111.2	chr19	-	3265	24	FSM	ENSMUSG00000024943.10	ENSMUST00000226111.2	3265	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	103.547364576676	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAAAGATTGGTTAT	NA	False	NA	-8	True	AATAAA	-17	NA	23249963	23186098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23249870
ENSMUST00000226119.2	chr15	+	4111	22	FSM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.3558778189685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGACAGACTAGTTTACA	98	False	NA	NA	False	NA	NA	NA	30173196	31028187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_30173310_30332155_30332293_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ENSMUST00000226119.2-0	chr15	+	5932	22	FSM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	-521	-1300	-63	0	multi-exon	FALSE	canonical	0	0	junction_3	16.3558778189685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGCTGCCATCTTCCT	16	False	NA	NA	False	NA	NA	NA	30172675	31029487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_30173310_30332155_30332293_30480927_30481041_30619367_30619400_30619968_30620086_30634789_30634963_30646914_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ENSMUST00000226124.2	chr15	-	2461	16	FSM	ENSMUSG00000054277.9	ENSMUST00000226124.2	2461	16	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_5	14.6272196796095	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGATTTCAGATGACT	3598	False	NA	-108	True	AGTAAA	-26	NA	83234375	83184021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ENSMUST00000226129.2	chr15	-	2614	2	FSM	ENSMUSG00000022378.15	ENSMUST00000226129.2	2614	2	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAATGAAATGAGA	NA	False	NA	NA	False	AGTAAA	-31	NA	63932277	63892089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63894470_63932043
ENSMUST00000226192.2	chr14	+	2984	1	FSM	ENSMUSG00000075502.3	ENSMUST00000226192.2	2984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGAGTTCGTATGGTTT	NA	False	NA	NA	False	NA	NA	NA	79689274	79692258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_79689300_79692300
ENSMUST00000226208.3	chr17	+	3039	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATTGTCTGTGTTGGC	NA	False	NA	7	True	ATTAAA	-16	NA	30223706	30428996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ENSMUST00000226208.3-0	chr17	+	1105	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	331	1603	0	0	multi-exon	FALSE	canonical	3	90	junction_1	13.1301180497359	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCTAGTGGATTTACA	NA	False	NA	22	True	ATTAAA	-23	NA	30224037	30427393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ENSMUST00000226232.2	chr16	-	3120	17	FSM	ENSMUSG00000022892.12	ENSMUST00000226232.2	3120	17	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	13.879925927396	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAAAAAAATTAAAAAAA	7354	False	NA	NA	False	NA	NA	NA	84970623	84751531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUST00000226256.2	chr14	+	1455	1	FSM	ENSMUSG00000022109.7	ENSMUST00000226256.2	1455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	73747471	73748926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_73747500_73748900
ENSMUST00000226257.2	chr15	-	493	2	FSM	ENSMUSG00000062397.9	ENSMUST00000226257.2	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	6741	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACCGCAGGATAAATGG	5522	False	NA	-26	True	AATAAA	-18	NA	37002279	37000871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37001168_37002082
ENSMUST00000226270.2	chr14	+	2799	1	FSM	ENSMUSG00000040618.8	ENSMUST00000226270.2	2799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	9092	False	NA	NA	False	NA	NA	NA	55777923	55780722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55777900_55780700
ENSMUST00000226284.2	chr17	-	5593	41	FSM	ENSMUSG00000002496.11	ENSMUST00000226284.2	6266	41	0	673	0	0	multi-exon	FALSE	canonical	3	45	junction_15	53.8189964139058	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851601	24815462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ENSMUST00000226290.2	chr14	-	1241	2	FSM	ENSMUSG00000021917.17	ENSMUST00000226290.2	1241	2	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACATTTGTTTTCTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	30723326	30721784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30722861_30723161
ENSMUST00000226303.2	chr14	+	4312	12	FSM	ENSMUSG00000053205.10	ENSMUST00000226303.2	1730	12	0	-2582	0	0	multi-exon	FALSE	canonical	2	2	junction_3	88.5079255917908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGCAATGATTGAGAAG	NA	False	NA	-5	True	ATTAAA	-16	NA	45588678	45614340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45595673_45595765_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ENSMUST00000226336.2	chr15	+	2547	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226336.2	2547	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	350.174510066053	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATTTAAAAAATGGCA	9639	False	NA	NA	False	TATAAA	-20	NA	44291510	44301205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297296_44297370_44299007
ENSMUST00000226340.2	chr14	+	935	8	FSM	ENSMUSG00000022111.10	ENSMUST00000226340.2	935	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	1942.45800521937	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTGTTGTTTTTGCTA	3059	False	NA	21	True	AATAAA	-17	NA	101903231	101933560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101923006_101923199_101928007_101928084_101932594_101932654_101933337
ENSMUST00000226352.2	chr14	+	2784	11	FSM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	479.473419492676	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGCAGTTGGAAGAATGG	9014	False	NA	4	True	NA	NA	NA	55777845	55787281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761_55786112_55786411
ENSMUST00000226352.2-0	chr14	+	2147	11	FSM	ENSMUSG00000040618.8	ENSMUST00000226352.2	2784	11	0	637	0	253	multi-exon	FALSE	canonical	3	41	junction_10	479.473419492676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTGCTCTGTGTTTGA	9014	False	NA	NA	False	AAAAAG	-23	NA	55777845	55786644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761_55786112_55786411
ENSMUST00000226363.2	chr15	-	2917	4	FSM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1037.5311508041	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAGTGAGTCTGTTGT	1378	False	NA	-10	True	AATAAA	-15	NA	38299326	38294659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38299302
ENSMUST00000226369.2	chr15	-	3562	7	FSM	ENSMUSG00000037487.8	ENSMUST00000226369.2	3562	7	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_5	54.850554539889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAATTAAGTATGTTC	6686	False	NA	-40	True	NA	NA	NA	37978325	37968137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37975916_37976303_37976480_37978265
ENSMUST00000226398.2	chr17	-	5459	40	FSM	ENSMUSG00000002496.11	ENSMUST00000226398.2	5459	40	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_39	50.8383497379318	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTTGACTTTGTCTT	NA	False	NA	8	True	NA	NA	NA	24851582	24815443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
ENSMUST00000226400.2	chr14	+	2281	1	FSM	ENSMUSG00000036339.19	ENSMUST00000226400.2	2281	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTAAGTTTTCCTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	48683753	48686034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_48683800_48686000
ENSMUST00000226414.2	chr15	-	8397	59	FSM	ENSMUSG00000037487.8	ENSMUST00000226414.2	8397	59	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	178.88035064093	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAAAAGTGTGTATTG	182	False	NA	NA	False	NA	NA	NA	38078669	37968536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ENSMUST00000226453.2	chr15	-	2381	4	FSM	ENSMUSG00000062397.9	ENSMUST00000226453.2	517	4	-66	-1798	-66	1627	multi-exon	TRUE	canonical	2	5	junction_3	3120.35097740979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTAATTTCTTGTACC	-12	True	NA	-6	True	ATTAAA	-19	NA	37007325	36999244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007112
ENSMUST00000226459.2	chr14	-	659	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	0	5534	0	0	multi-exon	FALSE	canonical	3	520	junction_3	59.8618409339372	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGATGCTTTTCCACA	NA	False	NA	-7	True	NA	NA	NA	78112366	78063654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
ENSMUST00000226460.2	chr17	-	665	4	FSM	ENSMUSG00000040097.17	ENSMUST00000226460.2	665	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	42.1926797231726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGGCCGCCTTCTGGTG	7525	False	NA	NA	False	NA	NA	NA	23990576	23981532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23981569_23981949_23982293_23989208_23989307_23990388
ENSMUST00000226463.2	chr14	-	2214	6	FSM	ENSMUSG00000022178.12	ENSMUST00000226463.2	2214	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_5	64.082446894606	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGTGAGTGTATTGT	NA	False	NA	-9	True	AGTAAA	-15	NA	54809539	54804931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222
ENSMUST00000226488.2	chr17	+	793	3	FSM	ENSMUSG00000036552.20	ENSMUST00000226488.2	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	77	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCAGGTGCAGCT	NA	False	NA	NA	False	NA	NA	NA	15261876	15263858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15261909_15262509_15262679_15263266
ENSMUST00000226519.2	chr14	+	4625	10	FSM	ENSMUSG00000040618.8	ENSMUST00000226519.2	4625	10	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_5	122.962304772893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAGAAACCCTTCA	8891	False	NA	NA	False	NA	NA	NA	55777722	55788699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUST00000226522.2	chr14	-	2804	5	FSM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	128.961961446002	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGCCTGTGTT	5765	False	NA	-2	True	AATAAA	-25	NA	52252039	52243533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251962
ENSMUST00000226551.2	chr14	+	4098	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	14.1684707054141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTGTGTGTATGGTGT	NA	False	NA	24	True	AGTAAA	-15	NA	30673333	30710775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ENSMUST00000226555.2	chr15	-	2730	11	FSM	ENSMUSG00000022329.16	ENSMUST00000226555.2	2730	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	83.3220258995183	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCGTTGTTGTTATTGT	NA	False	NA	2	True	AATAAA	-21	NA	35179067	34875641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35178971
ENSMUST00000226561.2	chr17	+	1019	4	FSM	ENSMUSG00000036552.20	ENSMUST00000226561.2	1019	4	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	40.6147209217982	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAGAGACTTCAAACTA	NA	False	NA	NA	False	NA	NA	NA	15262509	15265916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308
ENSMUST00000226563.2	chr14	+	1444	7	FSM	ENSMUSG00000033589.5	ENSMUST00000226563.2	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	32.9313258497471	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTGGTACCCTGCACAG	6464	False	NA	NA	False	NA	NA	NA	70782690	70786041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_70783179_70783916_70783990_70784369_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ENSMUST00000226565.2	chr14	-	1971	10	FSM	ENSMUSG00000021902.8	ENSMUST00000226565.2	1971	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5.27280467453541	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGAATTGGCTCT	NA	False	NA	3	True	AATAAA	-20	NA	30973272	30959645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30960111_30960293_30960440_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUST00000226593.2	chr16	+	3864	19	FSM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_16	12.3923761908006	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGACTGCTTGTACTCCA	NA	False	NA	NA	False	AAAACA	-8	NA	51851968	52025876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ENSMUST00000226593.2-0	chr16	+	6399	19	FSM	ENSMUSG00000022637.12	ENSMUST00000226593.2	3864	19	0	-2535	0	0	multi-exon	FALSE	canonical	3	31	junction_16	12.3923761908006	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTATGTTATTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	51851968	52028411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
ENSMUST00000226633.2	chr15	-	350	1	FSM	ENSMUSG00000115224.2	ENSMUST00000226633.2	350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACAAGGTTTCTTGATGT	9667	False	NA	NA	False	NA	NA	NA	31521419	31521069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_31521100_31521400
ENSMUST00000226649.2	chr15	-	2209	4	FSM	ENSMUSG00000022360.9	ENSMUST00000226649.2	2209	4	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_3	7.84573486395988	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTCTAGTTCTTGTGT	NA	False	NA	-9	True	AATAAA	-22	NA	57962172	57957439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754
ENSMUST00000226659.2	chr14	-	1730	5	FSM	ENSMUSG00000002329.8	ENSMUST00000226659.2	1730	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	25.3673017879316	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGACAATTTTC	2342	False	NA	-23	True	AATAAA	-14	NA	55897908	55895350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897686_55897794
ENSMUST00000226703.2	chr14	-	4592	31	FSM	ENSMUSG00000032849.15	ENSMUST00000226703.2	4592	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	53.0189588732182	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAATCCATATAATT	8744	False	NA	NA	False	AATAGA	-40	NA	118914343	118721222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118905758_118905880_118906408_118906520_118914177
ENSMUST00000226722.2	chr14	-	935	5	FSM	ENSMUSG00000022108.9	ENSMUST00000226722.2	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	98.2776678599976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACCTTTCTTTTTTCTA	NA	False	NA	-19	True	ATTAAA	-25	NA	73605945	73600324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738
ENSMUST00000226739.2	chr14	+	680	6	FSM	ENSMUSG00000021832.9	ENSMUST00000226739.2	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_2	50.2808114492994	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGTACTGAAGCAGGT	4373	False	NA	NA	False	NA	NA	NA	45577910	45584254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200
ENSMUST00000226740.2	chr14	-	1765	15	FSM	ENSMUSG00000042354.8	ENSMUST00000226740.2	1765	15	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_10	235.33125806065	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30740975	30734389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738350_30738769_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ENSMUST00000226751.2	chr14	-	381	1	FSM	ENSMUSG00000115194.2	ENSMUST00000226751.2	381	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTTGATCCAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	48933438	48933057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_48933100_48933400
ENSMUST00000226753.2	chr14	-	2126	11	FSM	ENSMUSG00000000958.11	ENSMUST00000226753.2	2126	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	53.6977653166312	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGAGTGGCTTTATTCT	NA	False	NA	-4	True	AATAAA	-17	NA	54655136	54606898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54654045_54654228_54655113
ENSMUST00000226768.2	chr14	-	2366	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_3	1.69967317119759	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGAGCTGCTGGTCG	NA	False	NA	-1	True	AATAAA	-18	NA	51022952	51012906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
ENSMUST00000226770.2	chr14	+	2417	9	FSM	ENSMUSG00000040618.8	ENSMUST00000226770.2	2417	9	0	0	0	0	multi-exon	FALSE	canonical	3	1491	junction_4	96.0676031500734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9031	False	NA	27	True	ATTAAA	-24	NA	55777862	55786329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUST00000226782.2	chr14	-	949	4	FSM	ENSMUSG00000021917.17	ENSMUST00000226782.2	949	4	0	0	0	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACATTTGTTTTCTTTTTG	NA	False	NA	-4	True	AATAAA	-17	NA	30723566	30721782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUST00000226785.2	chr14	+	4168	10	FSM	ENSMUSG00000053205.10	ENSMUST00000226785.2	4168	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	83.3410366809877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGCAATGATTGAGAAG	NA	False	NA	-5	True	ATTAAA	-16	NA	45588633	45614340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ENSMUST00000226799.2	chr14	-	2678	10	FSM	ENSMUSG00000068015.9	ENSMUST00000226799.2	2678	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	44.8894389405243	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTGGCCTGTTGGTGC	NA	False	NA	NA	False	AATAAA	-34	NA	75043498	75000762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_75002688_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75043409
ENSMUST00000226816.2	chr15	-	1105	3	FSM	ENSMUSG00000054277.9	ENSMUST00000226816.2	1186	3	0	81	0	0	multi-exon	FALSE	canonical	2	5	junction_2	31.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGATTTCAGATGACT	NA	False	NA	-108	True	AGTAAA	-26	NA	83189542	83184021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83184904_83187303_83187426_83189441
ENSMUST00000226827.2	chr15	+	558	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	272.243457221657	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAATTTTTTTATTTTG	9616	False	NA	13	True	AATAAA	-15	NA	44291487	44299263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUST00000226828.2	chr14	+	1706	5	FSM	ENSMUSG00000021846.10	ENSMUST00000226828.2	3527	5	-46	1867	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.5972971738975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATCTCAACTGCCATGC	NA	False	NA	NA	False	ATTAAA	-21	NA	48358279	48494281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_48358691_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ENSMUST00000226833.2	chr14	+	1252	5	FSM	ENSMUSG00000021918.11	ENSMUST00000226833.2	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	6.25999201277446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGCTCAGTGATTAAG	NA	False	NA	NA	False	NA	NA	NA	30673434	30681535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097
ENSMUST00000226840.2	chr15	-	6802	34	FSM	ENSMUSG00000016028.12	ENSMUST00000226840.2	6802	34	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	10.9215417163463	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGCTGTGCTGGGTGG	NA	False	NA	-6	True	AATAAA	-20	NA	85862931	85783130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_85784940_85785137_85785400_85785639_85785871_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802
ENSMUST00000226852.2	chr14	-	1774	1	FSM	ENSMUSG00000115247.2	ENSMUST00000226852.2	1774	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAAGAGAGTGTAAGTC	NA	False	NA	NA	False	NA	NA	NA	105438535	105436761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_105436800_105438500
ENSMUST00000226873.2	chr14	+	1951	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	129	10894	0	312	multi-exon	FALSE	canonical	3	78	junction_6	62.4791165110391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGGAATGAGACACTT	NA	False	NA	NA	False	ATTAAA	-23	NA	45588678	45612070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ENSMUST00000226880.2	chr14	+	1756	5	FSM	ENSMUSG00000036023.7	ENSMUST00000226880.2	1756	5	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_2	46.9381241636263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTGACTGAGTCAGGG	NA	False	NA	NA	False	NA	NA	NA	51045381	51053756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326
ENSMUST00000226941.2	chr17	-	2642	13	FSM	ENSMUSG00000024137.10	ENSMUST00000226941.2	2642	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	15.7797338380595	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	False	NA	-93	True	NA	NA	NA	24674366	24662844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ENSMUST00000226980.2	chr14	-	1833	2	FSM	ENSMUSG00000115691.2	ENSMUST00000226980.2	1833	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32039942	32025618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_32027353_32039843
ENSMUST00000226988.3	chr15	-	4675	34	FSM	ENSMUSG00000022607.19	ENSMUST00000226988.3	4675	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.9887017485264	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCATTGCCTTTTTTTT	1740	False	NA	-4	True	AATAAA	-44	NA	73294977	73076950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73083835_73083845_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73266496_73266594_73294857
ENSMUST00000227020.2	chr14	-	741	2	FSM	ENSMUSG00000115359.2	ENSMUST00000227020.2	741	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATGATCCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	44689844	44677858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_44678301_44689545
ENSMUST00000227049.2	chr14	+	6144	19	FSM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	25.8044043517888	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521825	75581866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ENSMUST00000227061.2-1	chr14	-	2421	17	FSM	ENSMUSG00000040472.16	ENSMUST00000227061.2	2882	17	0	461	0	0	multi-exon	FALSE	canonical	3	103	junction_16	117.751443064406	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959659	55953333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ENSMUST00000227062.2	chr16	+	3728	19	FSM	ENSMUSG00000022637.12	ENSMUST00000227062.2	3728	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	15.6067609597354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAGAGCTTCTCTTGT	NA	False	NA	NA	False	AATAAA	-29	NA	51851925	52025747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ENSMUST00000227062.2-0	chr16	+	6349	19	FSM	ENSMUSG00000022637.12	ENSMUST00000227062.2	3728	19	43	-2664	0	0	multi-exon	FALSE	canonical	3	23	junction_2	15.6067609597354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTATGTTATTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	51851968	52028411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ENSMUST00000227063.2	chr7	+	168	1	FSM	ENSMUSG00000115783.2	ENSMUST00000227063.2	168	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCCCCAAGGGCATTTT	NA	False	NA	NA	False	NA	NA	NA	144468206	144468374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_144468200_144468400
ENSMUST00000227069.2	chr15	-	4829	15	FSM	ENSMUSG00000033228.9	ENSMUST00000227069.2	4829	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	76.3346552480375	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAATGGGATGTGCGT	NA	False	NA	-3	True	AATAAA	-22	NA	96358705	96312452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96312798_96312912_96313031_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ENSMUST00000227076.2	chr14	-	865	5	FSM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	35.7587401903367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATACCATGTGCGAGTTA	NA	False	NA	-4	True	AATAAA	-16	NA	76794298	76770255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_76770687_76777345_76777495_76787421_76787495_76793870_76793989_76794204
ENSMUST00000227089.2	chr14	-	3522	28	FSM	ENSMUSG00000014496.9	ENSMUST00000227089.2	3522	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	34.8652117503652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCAAAAGGAACTTCTAGA	NA	False	NA	NA	False	AAGAAA	-39	NA	31503872	31423802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31503659
ENSMUST00000227096.2	chr14	+	1848	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_7	36.4029064448587	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	False	NA	20	True	AATAAA	-22	NA	30853009	30861081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUST00000227120.2	chr17	-	2943	7	FSM	ENSMUSG00000040097.17	ENSMUST00000227120.2	2943	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	23.685438564654	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGTGTGTCAGTAATA	NA	False	NA	1	True	AATAAA	-25	NA	23982063	23971766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_23972838_23974627_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949
ENSMUST00000227123.2	chr14	-	1336	5	FSM	ENSMUSG00000022101.7	ENSMUST00000227123.2	1336	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	9.90896059130321	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCGGCAGAAGAAATAGG	NA	False	NA	NA	False	NA	NA	NA	70879694	70873948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70874464_70875906_70876014_70876241_70876387_70878971_70879009_70879162
ENSMUST00000227141.2	chr16	-	4021	11	FSM	ENSMUSG00000040820.17	ENSMUST00000227141.2	4021	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.0438080851674	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	94091145	93931270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_93932825_93933859_93934074_93935507_93935623_93939667_93939829_93942207_93942276_94031922_94032195_94063450_94063634_94068234_94069167_94069394_94069558_94088650_94088786_94090921
ENSMUST00000227154.2	chr15	+	1380	1	FSM	ENSMUSG00000115708.2	ENSMUST00000227154.2	1380	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-18	NA	21958517	21959897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_21958500_21959900
ENSMUST00000227162.2	chr14	+	3022	3	FSM	ENSMUSG00000037536.15	ENSMUST00000227162.2	373	3	-28	-2621	0	0	multi-exon	FALSE	canonical	3	11	junction_2	19	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47710017	47769419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_47710175_47738250_47738328_47766631
ENSMUST00000227173.2	chr15	+	1122	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	348.219025608766	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATCCTCAGCTCAGCA	NA	False	NA	4	True	AATAAA	-5	NA	59246133	59473521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
ENSMUST00000227212.2	chr14	-	2385	2	FSM	ENSMUSG00000115354.2	ENSMUST00000227212.2	2385	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGCAATCTATGTGCC	NA	False	NA	NA	False	NA	NA	NA	44049840	44042152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_44044396_44049698
ENSMUST00000227242.2	chr14	-	2617	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	0	0	0	0	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGAAGCTGGTGTGT	8748	False	NA	-38	True	AATAAA	-19	NA	52341462	52311001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000227242.2-0	chr14	-	1386	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	-23	1254	0	0	multi-exon	FALSE	canonical	3	1744	junction_2	852.637149891441	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000227255.2	chr14	+	3406	26	FSM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_16	9.45524193238862	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTCTCCGTCCTTTTG	9408	False	NA	3	True	AATAAA	-19	NA	79086693	79302708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
ENSMUST00000227278.2	chr16	+	1573	10	FSM	ENSMUSG00000022946.11	ENSMUST00000227278.2	1573	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10.3279555898864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTAATTGTCATGTGTAT	4549	False	NA	18	True	AATAAA	-21	NA	93595721	93607474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ENSMUST00000227299.2	chr15	-	3206	8	FSM	ENSMUSG00000022195.8	ENSMUST00000227299.2	3206	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	97.0238767163074	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTGATAATCAAAAGATT	NA	False	NA	-12	True	AATAAA	-19	NA	12824716	12808857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12824552
ENSMUST00000227304.2	chr14	+	669	2	FSM	ENSMUSG00000022019.17	ENSMUST00000227304.2	669	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTCTGGTTCACTTG	NA	False	NA	5	True	AATAAA	-19	NA	87776534	87782938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_87776958_87782692
ENSMUST00000227316.2	chr15	-	1825	11	FSM	ENSMUSG00000002524.18	ENSMUST00000227316.2	1825	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	435.234006024345	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952719	75942038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952652
ENSMUST00000227323.2	chr15	-	2266	7	FSM	ENSMUSG00000022299.10	ENSMUST00000227323.2	979	7	0	-1287	0	186	multi-exon	FALSE	canonical	2	3	junction_3	37.5307281511504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTGCTATAATATCC	NA	False	NA	NA	False	AATAAA	-31	NA	38976068	38958176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38959504_38960914_38961061_38961523_38961593_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ENSMUST00000227325.2	chr2	-	4380	15	FSM	ENSMUSG00000039117.17	ENSMUST00000227325.2	4380	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	16.8935744335785	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCACGCCTGCTTTTCC	NA	False	NA	0	True	ATTAAA	-17	NA	179618439	179553944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
ENSMUST00000227359.2	chr16	-	853	5	FSM	ENSMUSG00000022749.9	ENSMUST00000227359.2	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	12.3364297914753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATATGTGTGTATAT	NA	False	NA	NA	False	NA	NA	NA	57051735	57028319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ENSMUST00000227371.2	chr15	-	1130	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	79.3823378060608	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGCATTATTCAGCAATA	NA	False	NA	NA	False	NA	NA	NA	8128693	8121710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ENSMUST00000227381.2	chr15	+	4581	24	FSM	ENSMUSG00000037386.17	ENSMUST00000227381.2	4581	24	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_17	12.1392363269332	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	57	True	TTTAAA	-26	NA	39300392	39545849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39473459_39473538_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ENSMUST00000227396.2	chr15	+	1774	1	FSM	ENSMUSG00000115070.2	ENSMUST00000227396.2	1774	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGGACCTGGACACCT	NA	False	NA	NA	False	NA	NA	NA	38853628	38855402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_38853600_38855400
ENSMUST00000227410.2	chr14	+	2544	9	FSM	ENSMUSG00000036291.7	ENSMUST00000227410.2	2544	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	33.1200467994838	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGTGGGTATCATT	NA	False	NA	NA	False	AATAAA	-42	NA	49303987	49324822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_49304322_49311005_49311200_49311426_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ENSMUST00000227428.2	chr2	+	6981	12	FSM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.8797082897678	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCCTTGTCATCTGT	NA	False	NA	7	True	AATAAA	-16	NA	153187748	153245927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ENSMUST00000227428.2-0	chr2	+	5055	12	FSM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	16	1910	0	-1910	multi-exon	FALSE	canonical	0	0	junction_2	51.8797082897678	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTTAGTGTGTGTATT	NA	False	NA	19	True	AATAAA	-21	NA	153187764	153244017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ENSMUST00000227435.2	chr15	-	4580	2	FSM	ENSMUSG00000022607.19	ENSMUST00000227435.2	4580	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1743	False	NA	NA	False	NA	NA	NA	73294974	73262130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73266594_73294857
ENSMUST00000227458.2	chr14	-	1683	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_2	1099.6436638748	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTGAAGGAAAGACAAT	8750	False	NA	-18	True	AATAAA	-20	NA	52341460	52311909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000227458.2-0	chr14	-	1362	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	-25	346	0	0	multi-exon	FALSE	canonical	3	633	junction_2	1099.6436638748	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000227463.2	chr15	+	556	4	FSM	ENSMUSG00000041841.9	ENSMUST00000227463.2	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_1	9620.00361515294	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTGGTGATCTAAG	2304	False	NA	34	True	AATAAA	-15	NA	5146182	5148157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_5146409_5146768_5146905_5147100_5147186_5148048
ENSMUST00000227468.2	chr14	-	1490	5	FSM	ENSMUSG00000037722.9	ENSMUST00000227468.2	1490	5	0	0	0	0	multi-exon	FALSE	canonical	3	1091	junction_1	77.5387000148958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAACTTGAATCTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	45622941	45615610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037
ENSMUST00000227474.2	chr15	+	2906	1	FSM	ENSMUSG00000115318.2	ENSMUST00000227474.2	2906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33831593	33834499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_33831600_33834500
ENSMUST00000227478.2	chr15	+	2084	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_11	40.4687808343941	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATACATACATACATATA	7144	False	NA	12	True	NA	NA	NA	76361644	76385172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ENSMUST00000227506.2	chr15	-	4732	17	FSM	ENSMUSG00000022246.15	ENSMUST00000227506.2	4732	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	52.0408493397254	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGTGGTGTTTGTGA	9366	False	NA	-3	True	AATAAA	-26	NA	10714184	10569054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714079
ENSMUST00000227536.2	chr14	-	1301	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8784	False	NA	42	True	AATAAA	-18	NA	52341426	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ENSMUST00000227536.2-0	chr14	-	2614	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	-59	-1254	0	0	multi-exon	FALSE	canonical	3	1725	junction_7	903.44372897739	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGAAGCTGGTGTGT	8725	False	NA	-38	True	AATAAA	-19	NA	52341485	52311001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ENSMUST00000227553.2	chr14	+	383	1	FSM	ENSMUSG00000060143.8	ENSMUST00000227553.2	383	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5402	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	105919262	105919645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_105919300_105919600
ENSMUST00000227582.2	chr15	+	2388	9	FSM	ENSMUSG00000037617.13	ENSMUST00000227582.2	2388	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	7	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTGTGAGTATGCCTG	72	False	NA	NA	False	AATAAA	-14	NA	36210607	36235756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
ENSMUST00000227595.2	chr14	-	1624	5	FSM	ENSMUSG00000021891.9	ENSMUST00000227595.2	1027	5	-9	-588	0	588	multi-exon	FALSE	canonical	3	12	junction_3	105.354164606816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTGTAAGTCCTGAAA	NA	False	NA	-1	True	AATAAA	-29	NA	31216987	31200953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31215553_31215922_31216858
ENSMUST00000227632.2	chr14	+	1387	5	FSM	ENSMUSG00000090788.3	ENSMUST00000227632.2	1387	5	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	8.90224690738243	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCACTCTAAGAAACTT	NA	False	NA	NA	False	AATAAA	-15	NA	43243670	43251481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_43243801_43244528_43244692_43245648_43245781_43246462_43246644_43250700
ENSMUST00000227635.2	chr15	+	925	3	FSM	ENSMUSG00000041841.9	ENSMUST00000227635.2	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	15185	junction_2	4434.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGGTGATCTAAGGT	2297	False	NA	36	True	AATAAA	-17	NA	5146175	5148159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_5146905_5147100_5147186_5148048
ENSMUST00000227666.2	chr14	-	3337	27	FSM	ENSMUSG00000022021.15	ENSMUST00000227666.2	3337	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	43.0116951207432	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTATTCTTACCTGCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	87378606	87009496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_87009582_87010042_87010139_87047771_87047908_87066427_87066593_87072412_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ENSMUST00000227683.2	chr4	+	5578	22	FSM	ENSMUSG00000012123.18	ENSMUST00000227683.2	5578	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	46.1690672034849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGGTGGTCTCGTCTCT	NA	False	NA	17	True	NA	NA	NA	133788125	133819815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_133788242_133790613_133790684_133792549_133793266_133799740_133802247_133802621_133802670_133802751_133802865_133803009_133803140_133806148_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
ENSMUST00000227691.2	chr15	+	1945	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAACTGATTTTCTGTGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	44482570	44504911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUST00000227691.2-0	chr15	+	1456	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	0	489	0	0	multi-exon	FALSE	canonical	3	53	junction_1	13.0894359440479	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTATATCCTTATT	NA	False	NA	12	True	ATTAAA	-22	NA	44482570	44504422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUST00000227723.2	chr16	-	3371	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	31	4765	0	0	multi-exon	FALSE	canonical	3	25	junction_10	12.3870677065552	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCAGGCAAGACGTTTC	7354	False	NA	-13	True	AATAAA	-12	NA	84970623	84751337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUST00000227725.2	chr15	-	2618	19	FSM	ENSMUSG00000022350.8	ENSMUST00000227725.2	2618	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	115.6451575689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59224378	59203845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224138
ENSMUST00000227735.2	chr15	-	1136	2	FSM	ENSMUSG00000022280.10	ENSMUST00000227735.2	1136	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTGTTTTTATATTGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	36283280	36265264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36266178_36283057
ENSMUST00000227745.2	chr17	-	5598	42	FSM	ENSMUSG00000002496.11	ENSMUST00000227745.2	5598	42	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_16	65.9182609954111	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGCCCGTGGAGTTC	NA	False	NA	-43	True	AATAAA	-11	NA	24851569	24815494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ENSMUST00000227767.2	chr14	-	3319	28	FSM	ENSMUSG00000034731.12	ENSMUST00000227767.2	3319	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.9544511501033	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGTCACACTGGTGCT	NA	False	NA	-77	True	ATTAAA	-34	NA	78866730	78807510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_78807598_78813326_78813453_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78866667
ENSMUST00000227775.2	chr14	-	1287	8	FSM	ENSMUSG00000022020.16	ENSMUST00000227775.2	1287	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	69.5874138279711	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGGGTTTTTTGTTTGT	NA	False	NA	-10	True	AATAAA	-11	NA	79588261	79573075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128
ENSMUST00000227791.2	chr15	+	5707	21	FSM	ENSMUSG00000064210.8	ENSMUST00000227791.2	3149	21	-49	-2509	0	717	multi-exon	FALSE	canonical	3	29	junction_1	22.898635330517	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGCTGTGGCCTAACGA	NA	False	NA	5	True	AATAAA	-14	NA	95688723	95873349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_95688938_95728524_95728588_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ENSMUST00000227809.2	chr2	+	3560	13	FSM	ENSMUSG00000026781.18	ENSMUST00000227809.2	1986	13	34	-1608	0	0	multi-exon	FALSE	canonical	3	36	junction_1	25.6850583457041	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAACTGTATTGACTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	22958246	23004525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_22958299_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUST00000227815.2	chr14	+	1270	4	FSM	ENSMUSG00000022111.10	ENSMUST00000227815.2	1270	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2159.4787951417	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTTTTAGAACCATTCT	90	False	NA	NA	False	AGTAAA	-14	NA	101891402	101905258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_101891556_101903196_101903326_101903947_101904105_101904427
ENSMUST00000227842.2	chr14	-	2001	9	FSM	ENSMUSG00000007589.10	ENSMUST00000227842.2	2001	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	108.661170617659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCAAAGGACCTAGATT	NA	False	NA	NA	False	AATAAA	-31	NA	55919202	55914074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55914739_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUST00000227843.2	chr15	-	3024	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	-15	2068	0	840	multi-exon	FALSE	canonical	3	89	junction_5	79.6338844685826	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTAGTGATGTTTG	NA	False	NA	-9	True	AATAAA	-16	NA	44291284	44238626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ENSMUST00000227852.2	chr14	-	692	2	FSM	ENSMUSG00000021891.9	ENSMUST00000227852.2	692	2	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGGGAGCCTTCCTAG	NA	False	NA	NA	False	NA	NA	NA	31216989	31215360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31215922_31216858
ENSMUST00000227863.2	chr14	-	6616	28	FSM	ENSMUSG00000014496.9	ENSMUST00000227863.2	6616	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	34.8652117503652	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTCTTTCTTTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	31502350	31420724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31502121
ENSMUST00000227934.2	chr14	-	2058	3	FSM	ENSMUSG00000006288.9	ENSMUST00000227934.2	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGGAAAAAGAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	51022950	51013556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_51015426_51018931_51019065_51022894
ENSMUST00000227948.2	chr14	-	952	3	FSM	ENSMUSG00000033186.10	ENSMUST00000227948.2	952	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	387	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCATTTCTCTGTAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	99283529	99273221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_99273947_99277950_99278097_99283448
ENSMUST00000227948.2-0	chr14	-	2235	3	FSM	ENSMUSG00000033186.10	ENSMUST00000227948.2	952	3	-41	-1242	0	0	multi-exon	FALSE	canonical	3	18	junction_2	387	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTCCTTTTGATATAC	NA	False	NA	NA	False	AATAAA	-18	NA	99283570	99271979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_99273947_99277950_99278097_99283448
ENSMUST00000227957.2	chr14	-	620	3	FSM	ENSMUSG00000052584.11	ENSMUST00000227957.2	620	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATATTGAACTGGCCT	NA	False	NA	NA	False	AATAAA	-36	NA	76793932	76777009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_76777495_76787421_76787495_76793870
ENSMUST00000227969.2	chr14	+	3363	11	FSM	ENSMUSG00000022064.11	ENSMUST00000227969.2	3363	11	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_3	21.0855400689667	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAAGTCTGTCAACTCT	NA	False	NA	NA	False	AATAAA	-16	NA	99370720	99461114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994
ENSMUST00000227999.2	chr15	-	3132	8	FSM	ENSMUSG00000022263.11	ENSMUST00000227999.2	3132	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	4.49489506358636	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTGTTAGGCTTTTTA	NA	False	NA	0	True	ATTAAA	-14	NA	27742409	27730736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_27733117_27733591_27733731_27735464_27735666_27736532_27736612_27740660_27740783_27741001_27741165_27741337_27741366_27742389
ENSMUST00000228002.2	chr15	-	3315	10	FSM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	128.214615603374	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTGTATTGAAATCTC	NA	False	NA	-23	True	AATAAA	-30	NA	79287456	79244903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUST00000228006.2	chr14	+	3299	21	FSM	ENSMUSG00000006527.17	ENSMUST00000228006.2	3299	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	22.2285852001426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGGCTCTAGGGTTT	NA	False	NA	27	True	ATTAAA	-19	NA	30438447	30540303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30438546_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ENSMUST00000228009.2	chr14	-	2643	16	FSM	ENSMUSG00000022099.18	ENSMUST00000228009.2	2643	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.6226655303828	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70867594	70841109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70842295_70842407_70842489_70842980_70842989_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178_70864309_70867456
ENSMUST00000228027.2	chr14	+	1460	3	FSM	ENSMUSG00000040822.8	ENSMUST00000228027.2	811	3	-21	-628	0	0	multi-exon	FALSE	canonical	3	26	junction_1	179.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTACTGGTGATTCACAT	NA	False	NA	NA	False	AATAAA	-26	NA	54923672	54928198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54924111_54924493_54924578_54927260
ENSMUST00000228029.2	chr15	-	2279	12	FSM	ENSMUSG00000037487.8	ENSMUST00000228029.2	2279	12	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_11	97.6085113481571	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	400	False	NA	-5	True	AATAAA	-31	NA	37984611	37968102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190
ENSMUST00000228071.2	chr15	+	5215	18	FSM	ENSMUSG00000047888.11	ENSMUST00000228071.2	5215	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	4.62578900031471	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGCACAACTGGGCACAC	NA	False	NA	NA	False	NA	NA	NA	80682915	80803436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80683006_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711
ENSMUST00000228072.2	chr15	-	4519	5	FSM	ENSMUSG00000033228.9	ENSMUST00000228072.2	4519	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.145331148352	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGTGACTGTATAGTA	NA	False	NA	-2	True	NA	NA	NA	96316573	96309579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952
ENSMUST00000228075.3-1	chr17	-	2553	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	0	2784	0	1859	multi-exon	FALSE	canonical	3	147	junction_3	10.4986771653491	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTCCTTTGTCATG	NA	False	NA	-9	True	NA	NA	NA	33110616	33100976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
ENSMUST00000228087.2	chr15	-	1694	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_12	49.6258221314491	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTTCCACGTCTGTAT	NA	False	NA	NA	False	AAAAAG	-4	NA	77037954	76967999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ENSMUST00000228134.2	chr14	-	2777	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228134.2	2777	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	27.9713257055935	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGACATATTAAA	8930	False	NA	NA	False	NA	NA	NA	75122695	74993566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75122596
ENSMUST00000228151.2	chr14	-	385	4	FSM	ENSMUSG00000022223.10	ENSMUST00000228151.2	385	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	32.0312347560939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAGCAGTTGAGGCACT	NA	False	NA	NA	False	NA	NA	NA	56137669	56136590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_56136763_56137103_56137187_56137270_56137378_56137646
ENSMUST00000228154.2	chr14	-	557	1	FSM	ENSMUSG00000033470.13	ENSMUST00000228154.2	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTTTGTGTTTTTAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	73263599	73263042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_73263000_73263600
ENSMUST00000228161.2	chr14	-	3671	4	FSM	ENSMUSG00000022023.7	ENSMUST00000228161.2	3671	4	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	11.4406682011537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCATAAAGTAAATAT	NA	False	NA	NA	False	NA	NA	NA	79709677	79698389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544
ENSMUST00000228177.2	chr15	-	3156	8	FSM	ENSMUSG00000022195.8	ENSMUST00000228177.2	3156	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	133.553321920192	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAATTAAATCCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	12824697	12808731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818214_12821489_12821640_12824552
ENSMUST00000228181.2	chr14	-	1822	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228181.2	793	5	-38	-991	0	793	multi-exon	FALSE	canonical	3	35	junction_1	108.841628065736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216987	31200748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31201768_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUST00000228191.2	chr15	+	3843	1	FSM	ENSMUSG00000115279.2	ENSMUST00000228191.2	3843	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCCCAAAACCTAAGATAC	2856	False	NA	NA	False	NA	NA	NA	103566265	103570108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_103566300_103570100
ENSMUST00000228198.2	chr14	-	2498	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAAAATGGCTTTTA	8754	False	NA	NA	False	GGGGCT	-20	NA	52341456	52311132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000228198.2-0	chr14	-	1404	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	-29	1123	0	0	multi-exon	FALSE	canonical	3	714	junction_5	1148.92795139643	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000228218.2	chr15	+	4618	9	FSM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	19.5316249964001	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTACACAGTATTTCTT	NA	False	NA	11	True	AATAAA	-20	NA	5173372	5211373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ENSMUST00000228226.2	chr15	-	1896	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	False	NA	-6	True	AATAAA	-20	NA	63932192	63802792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ENSMUST00000228226.2-0	chr15	-	3878	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	-135	-1847	0	0	multi-exon	FALSE	canonical	3	743	junction_12	159.721024150096	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTCATTTGTATATAT	NA	False	NA	-4	True	NA	NA	NA	63932327	63800945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ENSMUST00000228232.2	chr14	-	2535	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228232.2	2535	9	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	1522.21910380865	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCAACTGTCTCCAAAAT	8749	False	NA	39	True	AATAAA	-15	NA	52341461	52312258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52334778_52336002_52341345
ENSMUST00000228238.2	chr14	+	3514	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAGAAGTTAGAAA	NA	False	NA	NA	False	ATTAAA	-38	NA	49303952	49314150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_49304322_49311005
ENSMUST00000228246.2	chr14	+	1546	4	FSM	ENSMUSG00000022064.11	ENSMUST00000228246.2	1546	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	7.25718035235908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATTGTGACATGTGTT	NA	False	NA	NA	False	NA	NA	NA	99336859	99345200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734
ENSMUST00000228252.2	chr14	-	3125	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCAAGAGAGCACCCCA	569	False	NA	NA	False	AATAAA	-7	NA	75185316	74993612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ENSMUST00000228252.2-0	chr14	-	4623	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	0	-1498	0	0	multi-exon	FALSE	canonical	3	67	junction_17	17.7194355175815	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTTGGATTGATTGACT	569	False	NA	-1	True	ATTAAA	-20	NA	75185316	74992114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ENSMUST00000228255.2	chr14	+	1692	8	FSM	ENSMUSG00000021916.17	ENSMUST00000228255.2	1692	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	42.5992239078486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACCTATTTGCTTCCCCA	8585	False	NA	5	True	AATAAA	-16	NA	30728415	30733944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30728470_30728589_30728689_30730610_30730825_30731691_30732123_30732253_30732367_30732820_30732988_30733079_30733191_30733441
ENSMUST00000228264.2	chr14	-	1872	8	FSM	ENSMUSG00000007589.10	ENSMUST00000228264.2	3130	8	-34	1292	0	1103	multi-exon	FALSE	canonical	3	280	junction_5	42.7532073030068	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919277	55916560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUST00000228277.2	chr14	+	4140	26	FSM	ENSMUSG00000030662.11	ENSMUST00000228277.2	4140	26	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	254.949231024532	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGTAGAACTTCAGT	6454	False	NA	18	True	AATAAA	-20	NA	121153258	121184830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_121153582_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ENSMUST00000228328.2	chr14	+	4245	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	13.7241408043027	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTATGGTGTGTG	NA	False	NA	27	True	AGTAAA	-18	NA	30673333	30710778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ENSMUST00000228343.2	chr14	-	1768	1	FSM	ENSMUSG00000115785.2	ENSMUST00000228343.2	1768	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTTGGAGGTCTAGGA	NA	False	NA	NA	False	AATAAA	-34	NA	53100209	53098441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_53098400_53100200
ENSMUST00000228346.2	chr14	-	4491	28	FSM	ENSMUSG00000022100.15	ENSMUST00000228346.2	4491	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	116.158056550155	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAGTGAACCTA	NA	False	NA	NA	False	AATAAA	-26	NA	70945475	70902280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920297_70921095_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_70945390
ENSMUST00000228362.2	chr14	-	3308	28	FSM	ENSMUSG00000034731.12	ENSMUST00000228362.2	3308	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	9.15841379333106	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGTCACACTGGTGCT	NA	False	NA	-77	True	ATTAAA	-34	NA	78866714	78807510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_78807598_78813326_78813458_78814888_78814998_78816128_78816249_78818918_78819012_78821814_78821921_78823032_78823197_78824559_78824695_78824962_78825077_78827313_78827422_78832586_78832684_78832816_78832928_78834084_78834203_78836447_78836580_78840465_78840574_78841716_78841991_78844340_78844441_78846948_78847035_78850294_78850380_78853666_78853807_78853918_78854028_78855962_78856123_78857211_78857315_78861816_78861943_78862245_78862353_78865126_78865260_78865500_78865606_78866667
ENSMUST00000228366.3	chr15	-	3192	18	FSM	ENSMUSG00000075590.5	ENSMUST00000228366.3	3192	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.12091251497882	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATGTACTTTTTTGG	NA	False	NA	77	True	ATTAAA	-16	NA	75963476	75957366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962136_75962301_75962392_75962486_75962589_75962656_75962780_75963219
ENSMUST00000228412.2	chr17	-	5432	40	FSM	ENSMUSG00000002496.11	ENSMUST00000228412.2	5432	40	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_15	40.1073674085831	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGGCCCGTGGAGTTC	NA	False	NA	-43	True	AATAAA	-11	NA	24851604	24815494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ENSMUST00000228427.2	chr14	-	1360	5	FSM	ENSMUSG00000042354.8	ENSMUST00000228427.2	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	348.72222111589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCGCTGGAGGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	30739113	30736061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013
ENSMUST00000228439.2	chr15	-	811	5	FSM	ENSMUSG00000046034.9	ENSMUST00000228439.2	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	108.380118102907	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACCACCTAAACCAGGT	NA	False	NA	NA	False	NA	NA	NA	27630764	27608722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630543
ENSMUST00000228459.2	chr15	-	1008	1	FSM	ENSMUSG00000002524.18	ENSMUST00000228459.2	1008	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAATTCCTGC	NA	False	NA	NA	False	NA	NA	NA	75952731	75951723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75951700_75952700
ENSMUST00000228489.2	chr15	-	1969	9	FSM	ENSMUSG00000022206.8	ENSMUST00000228489.2	1969	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	12.6491106406735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGGAGGTGTGTGACAA	NA	False	NA	NA	False	ATTAAA	-22	NA	11907373	11844468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11906699_11906804_11907156
ENSMUST00000228505.2	chr14	+	1591	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228505.2	1591	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	11.5854314646552	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGCTCTAGAAAACA	NA	False	NA	NA	False	AATAAA	-18	NA	43132674	43163468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_43132821_43157302_43157435_43158114_43158297_43162337
ENSMUST00000228521.2	chr15	+	1790	2	FSM	ENSMUSG00000044250.9	ENSMUST00000228521.2	1790	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTCCAAAAGTGGTTC	NA	False	NA	14	True	AATAAA	-15	NA	97259082	97283561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_97259217_97281905
ENSMUST00000228529.2	chr14	+	3723	24	FSM	ENSMUSG00000021913.9	ENSMUST00000228529.2	3723	24	0	0	0	0	multi-exon	TRUE	canonical	3	463	junction_11	40.4855688541514	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043975	32070108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ENSMUST00000228538.3	chr15	-	915	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	18.2181455270914	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTCCTTTTTATGA	NA	False	NA	-1	True	ATTAAA	-16	NA	58805576	58772822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ENSMUST00000228567.2	chr14	+	1059	1	FSM	ENSMUSG00000000959.8	ENSMUST00000228567.2	1059	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	54598290	54599349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54598300_54599300
ENSMUST00000228580.2	chr14	-	2812	4	FSM	ENSMUSG00000049295.18	ENSMUST00000228580.2	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	140.753527684231	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTGTGTGTGTCTGCCT	4726	False	NA	-7	True	AATAAA	-20	NA	52258158	52243538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52257979
ENSMUST00000228595.2	chr15	+	458	1	FSM	ENSMUSG00000022354.5	ENSMUST00000228595.2	458	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCTGATTTTACAGATA	2868	False	NA	NA	False	NA	NA	NA	58805656	58806114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_58805700_58806100
ENSMUST00000228603.2	chr15	-	2437	8	FSM	ENSMUSG00000022206.8	ENSMUST00000228603.2	2437	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.17433793856409	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGGAGGTGTGTGACAA	1445	False	NA	NA	False	ATTAAA	-22	NA	11905760	11844468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ENSMUST00000228604.2	chr14	-	2435	15	FSM	ENSMUSG00000040472.16	ENSMUST00000228604.2	2435	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	142.040451266244	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55959633	55953333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959509
ENSMUST00000228627.3	chr2	-	2045	1	FSM	ENSMUSG00000115018.3	ENSMUST00000228627.3	2045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTACCTCTGCCATCCTC	NA	False	NA	NA	False	AATAAA	-19	NA	25136875	25134830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_25134800_25136900
ENSMUST00000228650.2	chr15	-	2819	5	FSM	ENSMUSG00000115009.2	ENSMUST00000228650.2	2819	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGATGTTTGGCCTATT	NA	False	NA	NA	False	NA	NA	NA	38455378	38436468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_38438614_38445370_38445501_38453402_38453648_38454915_38455060_38455223
ENSMUST00000228672.2	chr14	+	2173	15	FSM	ENSMUSG00000036023.7	ENSMUST00000228672.2	2173	15	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_7	45.539397610134	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCTTCTTTGGGTTT	NA	False	NA	NA	False	AATAAA	-15	NA	51045402	51058757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUST00000228675.2	chr14	+	897	11	FSM	ENSMUSG00000022024.11	ENSMUST00000228675.2	897	11	0	0	0	0	multi-exon	FALSE	canonical	3	1684	junction_7	92.1325132621487	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAAAGAAGAAGAAAAG	NA	False	NA	16	True	NA	NA	NA	79825248	79862343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280
ENSMUST00000228686.2	chr14	+	2347	13	FSM	ENSMUSG00000052395.18	ENSMUST00000228686.2	2347	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	13.9351175093718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTCTTTCCCTGTGTC	NA	False	NA	NA	False	NA	NA	NA	30376363	30413274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398865_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ENSMUST00000228698.2	chr15	+	462	1	FSM	ENSMUSG00000115771.2	ENSMUST00000228698.2	462	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCCTCTTCTCCAGTCT	236	False	NA	NA	False	NA	NA	NA	38079345	38079807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_38079300_38079800
ENSMUST00000228705.2	chr14	-	3220	1	FSM	ENSMUSG00000062093.6	ENSMUST00000228705.2	3220	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAAAATAGAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	90136883	90133663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_90133700_90136900
ENSMUST00000228724.2	chr14	+	388	2	FSM	ENSMUSG00000115272.2	ENSMUST00000228724.2	388	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTGCCAGCATCCACGA	NA	False	NA	NA	False	NA	NA	NA	43999608	44004094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_43999714_44003811
ENSMUST00000228727.2	chr14	-	2388	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228727.2	2388	5	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_4	24.3823706804732	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGACCTCTTTATATGTA	NA	False	NA	NA	False	NA	NA	NA	31216987	31203304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUST00000228736.2	chr14	-	702	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228736.2	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	1717	junction_2	34.7658836600865	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATTTGTTTTCTTTTT	NA	False	NA	-5	True	AATAAA	-16	NA	30723320	30721783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUST00000228748.2	chr14	-	1691	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTGAAGGAAAGACAATT	8746	False	NA	-17	True	AATAAA	-21	NA	52341464	52311908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000228748.2-0	chr14	-	1365	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	-21	347	0	0	multi-exon	FALSE	canonical	3	1620	junction_2	876.028386740407	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUST00000228761.2	chr15	+	1234	5	FSM	ENSMUSG00000022359.11	ENSMUST00000228761.2	798	5	-15	-421	0	0	multi-exon	FALSE	canonical	3	22	junction_3	18.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2660	False	NA	27	True	AATAAA	-17	NA	58004772	58022050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58016975_58017101_58021297
ENSMUST00000228774.2	chr14	-	2264	5	FSM	ENSMUSG00000042354.8	ENSMUST00000228774.2	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	372.387566924569	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTATGCTGTTGTTAGTG	NA	False	NA	-3	True	NA	NA	NA	30741050	30737234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232
ENSMUST00000228781.2	chr15	+	1427	2	FSM	ENSMUSG00000022556.12	ENSMUST00000228781.2	1427	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATATATATATA	3154	False	NA	18	True	NA	NA	NA	76383671	76385178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76384537_76384616
ENSMUST00000228788.3	chr15	+	4394	6	FSM	ENSMUSG00000022412.15	ENSMUST00000228788.3	4394	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	71.0785480999718	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGCAGGGCTGGCTCTG	2836	False	NA	NA	False	NA	NA	NA	80118301	80136987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132527_80132705_80133529
ENSMUST00000228803.2	chr17	+	1271	6	FSM	ENSMUSG00000036552.20	ENSMUST00000228803.2	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	17.1043854025802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTATGTTGCCTTTCAT	NA	False	NA	12	True	ATTAAA	-25	NA	15277012	15284492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283841
ENSMUST00000228815.2	chr14	-	755	3	FSM	ENSMUSG00000060373.16	ENSMUST00000228815.2	755	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	926	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCTGATGTGGAGGC	8760	False	NA	NA	False	NA	NA	NA	52341450	52321728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_52321849_52335471_52336002_52341345
ENSMUST00000228824.2	chr14	-	2377	14	FSM	ENSMUSG00000022099.18	ENSMUST00000228824.2	2377	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	82.4216321349376	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTATTGTTTCTATCCA	NA	False	NA	-3	True	ATTAAA	-19	NA	70866439	70841112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_70842295_70842407_70842489_70842980_70842989_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855678_70855849_70866359
ENSMUST00000228826.2	chr14	-	2070	16	FSM	ENSMUSG00000040472.16	ENSMUST00000228826.2	2492	16	-26	448	0	0	multi-exon	FALSE	canonical	3	103	junction_15	120.970777003741	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	False	NA	-19	True	AATAAA	-19	NA	55959659	55953781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959509
ENSMUST00000228838.2	chr14	-	1418	4	FSM	ENSMUSG00000115536.2	ENSMUST00000228838.2	1418	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTCTTCACTCTTAAGAA	NA	False	NA	NA	False	AATAAA	-12	NA	44552968	44463676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_44464468_44470160_44470264_44549379_44549821_44552885
ENSMUST00000228871.2	chr14	+	134	2	FSM	ENSMUSG00000010406.13	ENSMUST00000228871.2	134	2	0	0	0	0	multi-exon	FALSE	canonical	3	1056	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGACCTAGTATCCCGCC	NA	False	NA	NA	False	NA	NA	NA	54664368	54664575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54664418_54664490
ENSMUST00000228882.2	chr17	-	2226	13	FSM	ENSMUSG00000024137.10	ENSMUST00000228882.2	2226	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	27.3844795864779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGTTGTGATTGGG	237	False	NA	-4	True	AATAAA	-13	NA	24670453	24662755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379
ENSMUST00000228888.2	chr15	-	1971	3	FSM	ENSMUSG00000022195.8	ENSMUST00000228888.2	1971	3	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	25	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAGAAAAGGTGAAAT	NA	False	NA	NA	False	NA	NA	NA	12824727	12819989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_12821640_12823646_12823793_12824552
ENSMUST00000228941.2	chr15	-	428	2	FSM	ENSMUSG00000048307.9	ENSMUST00000228941.2	428	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAGACTAAGTGGGACC	NA	False	NA	NA	False	NA	NA	NA	36496861	36496087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_36496140_36496485
ENSMUST00000228958.2	chr15	+	4268	29	FSM	ENSMUSG00000037003.17	ENSMUST00000228958.2	4268	29	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.23180378388532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAGCCACAAGCTCCGA	9358	False	NA	NA	False	NA	NA	NA	102008847	102024431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102008988_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUST00000228985.2	chr15	+	2553	8	FSM	ENSMUSG00000023034.8	ENSMUST00000228985.2	2553	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	37.8897433754997	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	517	False	NA	19	True	AATAAA	-21	NA	101152149	101172676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101152233_101156188_101156308_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUST00000229019.2	chr15	-	941	10	FSM	ENSMUSG00000115987.2	ENSMUST00000229019.2	941	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	311.796586112021	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9671	False	NA	-25	True	AATAAA	-17	NA	76510206	76506308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508919_76509333_76509406_76510188
ENSMUST00000229050.2	chr15	+	6635	31	FSM	ENSMUSG00000058290.5	ENSMUST00000229050.2	6635	31	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	63.2712063703195	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCTTTAATGTGAC	391	False	NA	-28	True	TTTAAA	-27	NA	102204732	102232747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102204851_102205140_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ENSMUST00000229055.2	chr15	-	2212	5	FSM	ENSMUSG00000054967.8	ENSMUST00000229055.2	2212	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	6.04152298679729	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGGCTCTGAGTTTGT	8485	False	NA	NA	False	ATTAAA	-24	NA	76809648	76794570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809575
ENSMUST00000229077.2	chr16	-	537	2	FSM	ENSMUSG00000022515.7	ENSMUST00000229077.2	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAACAATAGTAAGGATG	8199	False	NA	NA	False	NA	NA	NA	4782061	4777973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_4778433_4781983
ENSMUST00000229086.2	chr4	-	502	1	FSM	ENSMUSG00000083757.3	ENSMUST00000229086.2	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATCCTTGATCTACACT	9912	False	NA	NA	False	AATAAA	-40	NA	131947800	131947298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_131947300_131947800
ENSMUST00000229126.2	chr16	+	5589	17	FSM	ENSMUSG00000039473.9	ENSMUST00000229126.2	5589	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_16	12.0167526291424	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCCTCATTTTTTCA	NA	False	NA	21	True	AATAAA	-21	NA	4868597	4904153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
ENSMUST00000229131.2	chr15	+	586	1	FSM	ENSMUSG00000116090.2	ENSMUST00000229131.2	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAAGCTTCCCTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	8004555	8005141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_8004600_8005100
ENSMUST00000229183.2	chr15	+	1020	5	FSM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	0	0	0	0	multi-exon	FALSE	canonical	3	10804	junction_2	302.309754225695	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCGTGTGTGAGCCTCT	NA	False	NA	34	True	AATAAA	-18	NA	76788301	76790514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUST00000229206.2	chr16	+	1316	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229206.2	1316	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	24.8766959220874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	19	True	AATAAA	-23	NA	49676007	49731444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49729065_49729099_49731231
ENSMUST00000229253.2	chr15	-	3722	1	FSM	ENSMUSG00000023169.16	ENSMUST00000229253.2	3722	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGCAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATGAA	-4	NA	96540280	96536558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96536600_96540300
ENSMUST00000229269.2	chr15	-	1433	12	FSM	ENSMUSG00000034022.9	ENSMUST00000229269.2	1433	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	180.120804273775	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGTCATTGTGTTTA	NA	False	NA	1	True	TATAAA	-30	NA	76482292	76480002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481788_76481862_76481931_76482009_76482101_76482175
ENSMUST00000229283.2	chr15	-	1141	1	FSM	ENSMUSG00000022450.7	ENSMUST00000229283.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAACAAAACAAAAAA	6297	False	NA	NA	False	NA	NA	NA	82238438	82237297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82237300_82238400
ENSMUST00000229318.2	chr16	+	1245	2	FSM	ENSMUSG00000022507.7	ENSMUST00000229318.2	1245	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTCCGTGTCATAGAAA	NA	False	NA	8	True	AATAAA	-19	NA	8649184	8661995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_8649266_8660831
ENSMUST00000229338.2	chr15	+	1157	7	FSM	ENSMUSG00000033047.6	ENSMUST00000229338.2	1157	7	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_4	138.29276513574	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTCTTGTTGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	78959447	78966693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053
ENSMUST00000229348.2	chr15	-	1069	8	FSM	ENSMUSG00000023755.11	ENSMUST00000229348.2	1069	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	69.0784824290016	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTGTGTCTGGAGAGAGC	NA	False	NA	-22	True	AATAAA	-20	NA	98779157	98775658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777645_98777726_98778388_98778461_98779030
ENSMUST00000229373.2	chr15	-	2348	8	FSM	ENSMUSG00000000552.11	ENSMUST00000229373.2	2348	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	72.5373935938407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGACTCAGACTGTCT	8927	False	NA	-12	True	AATAAA	-24	NA	103242754	103222321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103241491_103241629_103242657
ENSMUST00000229408.2	chr15	-	1931	12	FSM	ENSMUSG00000022429.12	ENSMUST00000229408.2	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	21.834085113127	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAATATAAGACTATTTA	NA	False	NA	NA	False	AATAAA	-10	NA	79489300	79445811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79446784_79452839_79452957_79468519_79468581_79469062_79469178_79469298_79469373_79475805_79475848_79477335_79477389_79480444_79480528_79484246_79484394_79485717_79485763_79486601_79486686_79489162
ENSMUST00000229428.2	chr15	+	1455	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	28.3318527024094	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCACTGTCTCTGACTG	7680	False	NA	10	True	AATAAA	-16	NA	97862109	97868155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ENSMUST00000229491.2	chr15	-	372	3	FSM	ENSMUSG00000116295.2	ENSMUST00000229491.2	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTACTTACGTTACTGG	NA	False	NA	NA	False	GGGGCT	-33	NA	97065103	97063838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97064057_97064383_97064492_97065057
ENSMUST00000229524.2	chr15	-	1513	4	FSM	ENSMUSG00000053929.18	ENSMUST00000229524.2	1513	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	282.269768523344	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCTTTTCTGGCAG	NA	False	NA	-65	True	NA	NA	NA	76540916	76531190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76531896_76532298_76532511_76533140_76533380_76540559
ENSMUST00000229551.2	chr15	-	2221	7	FSM	ENSMUSG00000000552.11	ENSMUST00000229551.2	2221	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	27.1456974286698	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCCCTCTCGCCAAGG	8816	False	NA	-25	True	AATAAA	-11	NA	103231937	103222334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103231817
ENSMUST00000229552.2	chr15	-	2933	3	FSM	ENSMUSG00000053929.18	ENSMUST00000229552.2	2933	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	231.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTATCCTGTCTGTG	3722	False	NA	-10	True	AATAAA	-15	NA	76535028	76531135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76531969_76532298_76532511_76533140
ENSMUST00000229581.2	chr15	-	1903	14	FSM	ENSMUSG00000009733.10	ENSMUST00000229581.2	1903	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	28.5781395330696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATCTCATTGTCTTGT	NA	False	NA	NA	False	ATTAAA	-40	NA	100449668	100407412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100407556_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
ENSMUST00000229609.2	chr4	-	3438	16	FSM	ENSMUSG00000066191.13	ENSMUST00000229609.2	3438	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	1.85711843695788	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTCTGAGGAAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	47057427	47016127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_47016817_47017522_47017620_47023743_47023861_47025685_47025754_47027100_47027285_47030663_47030852_47033115_47033270_47035715_47035920_47038913_47038964_47039669_47039869_47041014_47041164_47043535_47043643_47044819_47045025_47046009_47046055_47049068_47049572_47056948
ENSMUST00000229617.2	chr15	-	869	5	FSM	ENSMUSG00000022404.9	ENSMUST00000229617.2	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	17.2681064393291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGCTGTTGTTTTGGT	6861	False	NA	NA	False	NA	NA	NA	81245000	81212901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ENSMUST00000229618.2	chr15	+	1576	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	146.176678378513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTGGAGCTTTTTCTTTG	2123	False	NA	5	True	ATTAAA	-5	NA	102379087	102407316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUST00000229641.2	chr15	-	1355	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_10	74.8304750753328	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8840	False	NA	-22	True	AATAAA	-22	NA	75801681	75796524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUST00000229668.2	chr15	-	523	3	FSM	ENSMUSG00000022570.8	ENSMUST00000229668.2	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	110	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTAGATTGTCTGTT	8904	False	NA	NA	False	AAGAAA	-39	NA	75801617	75800077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75800393_75800740_75800899_75801567
ENSMUST00000229696.2	chr15	-	3302	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_1	18.9415475139235	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAATTTCTTTTGGTCT	NA	False	NA	50	True	ATTAAA	-18	NA	100449889	100400627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ENSMUST00000229710.2	chr15	+	1791	6	FSM	ENSMUSG00000022551.9	ENSMUST00000229710.2	1791	6	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_4	274.648866737149	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACATTTTAGCTGGTCA	NA	False	NA	25	True	AATAAA	-15	NA	76227732	76230132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ENSMUST00000229739.2	chr15	+	1311	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACATTTGTGGTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	78294181	78298206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78294865_78297578
ENSMUST00000229744.2	chr17	+	2914	5	FSM	ENSMUSG00000039601.17	ENSMUST00000229744.2	2914	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.9180788932265	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAGAAACAAAATGAAAG	4893	False	NA	NA	False	NA	NA	NA	44112734	44349951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_44112988_44147161_44147389_44328657_44328832_44331843_44332016_44347863
ENSMUST00000229770.2	chr15	-	645	5	FSM	ENSMUSG00000023044.3	ENSMUST00000229770.2	645	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	32.6879182573623	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACCAGTGCCTCTGAGAA	6632	False	NA	NA	False	NA	NA	NA	102112328	102096998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112130
ENSMUST00000229813.2	chr15	-	2091	7	FSM	ENSMUSG00000022559.9	ENSMUST00000229813.2	2091	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_6	11.5325625946708	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	76422946	76419929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922
ENSMUST00000229826.2	chr15	-	1319	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTGCATTTCCAGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	83989810	83961345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ENSMUST00000229826.2-0	chr15	-	2367	8	FSM	ENSMUSG00000018865.10	ENSMUST00000229826.2	1319	8	0	-1048	0	0	multi-exon	FALSE	canonical	3	60	junction_2	10.0285307284481	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTTTTGTCTGTGTGC	NA	False	NA	-1	True	AATAAA	-17	NA	83989810	83960297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83961784_83962969_83963099_83964387_83964527_83970800_83970896_83974159_83974287_83974792_83974874_83976490_83976622_83989631
ENSMUST00000229827.2	chr15	-	4628	1	FSM	ENSMUSG00000037525.6	ENSMUST00000229827.2	4628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGTGTCGTTTCTTTG	NA	False	NA	-2	True	ATTAAA	-17	NA	99372589	99367961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99368000_99372600
ENSMUST00000229828.2	chr15	+	1442	4	FSM	ENSMUSG00000042406.9	ENSMUST00000229828.2	659	4	-1	-782	0	0	multi-exon	FALSE	canonical	3	33	junction_1	614.772044473939	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4145	False	NA	32	True	AATAAA	-20	NA	80139384	80141742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80139486_80139768_80139887_80140407_80140723_80140834
ENSMUST00000229877.2	chr15	-	4726	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_12	13.0064086767511	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	-40	True	AATAAA	-15	NA	79430942	79411936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ENSMUST00000229951.2	chr15	-	1405	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229951.2	1405	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	184.382889661704	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8946	False	NA	-22	True	AATAAA	-22	NA	75801575	75796524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798591_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ENSMUST00000229999.2	chr15	-	510	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229999.2	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	214.206027511418	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTCCGCTTTCCTCCCG	NA	False	NA	NA	False	NA	NA	NA	97065124	97059069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97059277_97059835_97059964_97064383_97064492_97065057
ENSMUST00000230017.2	chr15	+	4391	34	FSM	ENSMUSG00000022142.9	ENSMUST00000230017.2	4391	34	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_4	35.3931351091682	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTATGTTCCTTCGTTGT	NA	False	NA	NA	False	AGTAAA	-16	NA	8138819	8186520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169
ENSMUST00000230022.2	chr16	-	2635	18	FSM	ENSMUSG00000022789.16	ENSMUST00000230022.2	2635	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_17	401.574918570512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176409	16131246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176362
ENSMUST00000230054.2	chr15	+	2639	14	FSM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	17.6655315775427	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCAGCCAGTGCTGTTG	NA	False	NA	14	True	AATAAA	-23	NA	98972455	98981290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ENSMUST00000230062.2	chr15	+	526	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	0	125	0	-125	multi-exon	FALSE	canonical	3	348	junction_1	1851.90407081468	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350841	81359462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUST00000230063.2	chr15	-	6511	7	FSM	ENSMUSG00000036197.17	ENSMUST00000230063.2	4427	7	28	-2112	0	0	multi-exon	FALSE	canonical	3	41	junction_3	8.55699843532896	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTCTAAATTTTTTT	NA	False	NA	-10	True	AATAAA	-13	NA	93173032	93137622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_93143011_93145739_93145913_93146239_93146364_93152181_93152434_93156945_93157072_93159627_93159800_93172756
ENSMUST00000230086.2	chr15	-	1963	16	FSM	ENSMUSG00000022464.15	ENSMUST00000230086.2	1963	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	409.635849125646	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCCGTGCAGTGCAGT	NA	False	NA	-12	True	ATTAAA	-23	NA	96929092	96894648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96929014
ENSMUST00000230105.2	chr15	+	1981	4	FSM	ENSMUSG00000022463.9	ENSMUST00000230105.2	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	39.6176167324027	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTG	2243	False	NA	NA	False	NA	NA	NA	82031451	82058095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953
ENSMUST00000230106.2	chr15	+	2960	5	FSM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.962099447699	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAGGTGTAGCCTGTAC	NA	False	NA	NA	False	AATAAA	-13	NA	76763508	76776589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430_76772548_76774206
ENSMUST00000230124.2	chr15	+	3193	17	FSM	ENSMUSG00000004187.12	ENSMUST00000230124.2	3193	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	3.9350190596743	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGCCTGGTGTTTTA	5851	False	NA	NA	False	ATTAAA	-18	NA	76544898	76552395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76544966_76545205_76545288_76545435_76545585_76545679_76545819_76545926_76546073_76546145_76546212_76546300_76546430_76546794_76547097_76547173_76547284_76548270_76548380_76548481_76548646_76550228_76550334_76550428_76550551_76550646_76550771_76550862_76550993_76551074_76551332_76551403
ENSMUST00000230134.2	chr15	-	854	2	FSM	ENSMUSG00000061360.9	ENSMUST00000230134.2	854	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGGTTGTCCTGTGACC	NA	False	NA	-115	True	NA	NA	NA	81751798	81749669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81750094_81751368
ENSMUST00000230157.2	chr15	-	4410	37	FSM	ENSMUSG00000034022.9	ENSMUST00000230157.2	4410	37	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	98.8724822532214	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491711	76480008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76480108_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ENSMUST00000230160.2	chr17	+	2920	8	FSM	ENSMUSG00000024059.11	ENSMUST00000230160.2	2920	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	19.6167358785964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGTGCTGTGTCTTTTAC	NA	False	NA	3	True	AATAAA	-16	NA	72117879	72165345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72163222
ENSMUST00000230171.2	chr15	+	1283	11	FSM	ENSMUSG00000046434.17	ENSMUST00000230171.2	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_9	4985.84843431888	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTTCTTGTCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	103148858	103155119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103154772_103154849_103154971
ENSMUST00000230177.2	chr15	+	1680	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	34.6028900527109	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGAAGAGTGTTAT	NA	False	NA	20	True	AATAAA	-14	NA	73596646	73629076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ENSMUST00000230192.2	chr15	+	2665	17	FSM	ENSMUSG00000033128.10	ENSMUST00000230192.2	2665	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	123.234516649152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTAGCTGCTCTTGTCA	NA	False	NA	14	True	AATAAA	-14	NA	78761750	78778781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773919_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUST00000230229.2	chr15	-	612	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	37.9300342736465	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTACTGTGTGTCATTTC	NA	False	NA	-4	True	NA	NA	NA	81845034	81839743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUST00000230271.2	chr15	+	543	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	342	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_4	39.9335385359224	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	False	NA	28	True	AATAAA	-22	NA	79025550	79035974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ENSMUST00000230274.2	chr15	+	1111	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_1	105.909814884594	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGATGGTGTGAGAGA	NA	False	NA	21	True	AATAAA	-13	NA	76832721	76834929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
ENSMUST00000230280.2	chr15	-	880	4	FSM	ENSMUSG00000053559.14	ENSMUST00000230280.2	880	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	291.611994875992	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTCATTTTCAAGAACT	NA	False	NA	-7	True	ATTAAA	-14	NA	100534572	100519242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_100519840_100520509_100520591_100534067_100534137_100534439
ENSMUST00000230281.2	chr16	+	1271	10	FSM	ENSMUSG00000055447.20	ENSMUST00000230281.2	1271	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	27.4352211222124	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGAATCCCATTTTT	NA	False	NA	19	True	AATAAA	-23	NA	49676018	49731444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728446_49731236
ENSMUST00000230288.2	chr15	-	1786	14	FSM	ENSMUSG00000023044.3	ENSMUST00000230288.2	1786	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	33.1450104235363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	2812	False	NA	NA	False	NA	NA	NA	102097410	102085753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102086222_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321
ENSMUST00000230294.2	chr15	+	2266	8	FSM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	31.1808418417333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGGGAATTACTTAT	2347	False	NA	26	True	AGTAAA	-15	NA	100366915	100377044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100367020_100367565_100367718_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUST00000230349.2	chr15	-	473	2	FSM	ENSMUSG00000036678.9	ENSMUST00000230349.2	473	2	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCTCATTTATCCCTA	NA	False	NA	NA	False	NA	NA	NA	102259122	102258234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102258516_102258930
ENSMUST00000230408.2	chr15	-	593	5	FSM	ENSMUSG00000068101.12	ENSMUST00000230408.2	593	5	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_2	109.17045158833	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGCGCTGGCCATGTGC	NA	False	NA	NA	False	NA	NA	NA	82128611	82118660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333
ENSMUST00000230434.2	chr15	+	2019	1	FSM	ENSMUSG00000042406.9	ENSMUST00000230434.2	2019	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGGGTTTTCAGTGT	4484	False	NA	32	True	AATAAA	-20	NA	80139723	80141742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80139700_80141700
ENSMUST00000230444.2	chr15	-	1521	11	FSM	ENSMUSG00000037570.17	ENSMUST00000230444.2	1521	11	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_2	90.6366923491805	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTATTTTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	99146845	99140698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582
ENSMUST00000230474.2	chr15	+	4637	28	FSM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	3.82361444641615	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGTTGATACCTTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	102012859	102024835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUST00000230479.2	chr15	+	504	2	FSM	ENSMUSG00000022414.9	ENSMUST00000230479.2	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCTCCCTCTGCTAGAA	4993	False	NA	NA	False	NA	NA	NA	80017327	80032869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80017390_80032427
ENSMUST00000230490.2	chr15	+	2477	13	FSM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.50548087508816	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTGTCTCTGGTCTG	382	False	NA	5	True	AATAAA	-16	NA	98532985	98542410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ENSMUST00000230495.2	chr16	-	1147	3	FSM	ENSMUSG00000022677.16	ENSMUST00000230495.2	1147	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	185.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGCTTATGGTCATG	NA	False	NA	-8	True	NA	NA	NA	14135208	14117111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_14118074_14122317_14122452_14135157
ENSMUST00000230505.2	chr15	+	1247	2	FSM	ENSMUSG00000022556.12	ENSMUST00000230505.2	1247	2	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATACATA	3329	False	NA	10	True	NA	NA	NA	76383846	76385170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76384254_76384330
ENSMUST00000230512.2	chr15	+	1728	3	FSM	ENSMUSG00000034259.9	ENSMUST00000230512.2	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACTGGACTAATGTCTT	947	False	NA	4	True	NA	NA	NA	76211664	76214873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76211868_76213229_76213437_76213555
ENSMUST00000230512.2-0	chr15	+	815	3	FSM	ENSMUSG00000034259.9	ENSMUST00000230512.2	1728	3	0	913	0	665	multi-exon	FALSE	canonical	3	25	junction_1	318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACCTTACTGTACAGCA	947	False	NA	13	True	AATAAA	-19	NA	76211664	76213960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76211868_76213229_76213437_76213555
ENSMUST00000230513.2	chr15	-	1953	8	FSM	ENSMUSG00000022559.9	ENSMUST00000230513.2	1953	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_7	19.025224930956	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTATTTATTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	76422935	76419926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116
ENSMUST00000230542.2	chr15	-	3596	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	0	0	0	0	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGACGGAATCATGTT	NA	False	NA	NA	False	NA	NA	NA	98432145	98415538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUST00000230542.2-0	chr15	-	2433	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	0	1163	0	0	multi-exon	FALSE	canonical	1	385	junction_5	229.121025758101	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432145	98416701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUST00000230614.2	chr16	-	3414	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATCTTGTGTACTAT	NA	False	NA	NA	False	AATAAA	-19	NA	31019980	30914233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ENSMUST00000230614.2-0	chr16	-	6498	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	-83	-3001	0	0	multi-exon	FALSE	canonical	3	119	junction_10	14.8474334816404	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGCTGTAAGTGCTCC	NA	False	NA	-23	True	AATAAA	-18	NA	31020063	30911232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ENSMUST00000230661.2	chr15	+	751	3	FSM	ENSMUSG00000000346.10	ENSMUST00000230661.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	416.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGAGTATGCCTAACTG	NA	False	NA	NA	False	NA	NA	NA	100513814	100516048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100514204_100514793_100514913_100515805
ENSMUST00000230679.2	chr15	-	3083	12	FSM	ENSMUSG00000016664.17	ENSMUST00000230679.2	3083	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	181.549073574344	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	7143	False	NA	0	True	AATAAA	-27	NA	83348771	83260322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286130_83286188_83286201_83348659
ENSMUST00000230681.2	chr15	-	7850	1	FSM	ENSMUSG00000089715.13	ENSMUST00000230681.2	7850	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	79718150	79710300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79710300_79718200
ENSMUST00000230698.2	chr16	-	6515	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230698.2	6515	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	34.2553910820154	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTAAGTGCTCCAGC	NA	False	NA	-20	True	AATAAA	-21	NA	31020063	30911229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972509_30972578_30973390_30973511_30979148_30979207_31019756
ENSMUST00000230703.2	chr16	+	6356	18	FSM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_17	11.4435578952107	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCCTCATTTTTTCA	NA	False	NA	21	True	AATAAA	-21	NA	4867920	4904153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ENSMUST00000230736.2	chr15	-	1319	11	FSM	ENSMUSG00000022570.8	ENSMUST00000230736.2	1319	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	183.950428104965	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAAGCTGGGCCAGCCT	8894	False	NA	-22	True	AATAAA	-22	NA	75801627	75796524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798291_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUST00000230749.2	chr17	+	3357	14	FSM	ENSMUSG00000024059.11	ENSMUST00000230749.2	3357	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.0429776790315	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGTGGGGTTGGGAGTA	NA	False	NA	NA	False	NA	NA	NA	72089611	72164537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_72089846_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131912_72135501_72135646_72141039_72141303_72144688_72144754_72156886_72156960_72163222
ENSMUST00000230765.2	chr15	-	2046	6	FSM	ENSMUSG00000022476.9	ENSMUST00000230765.2	1290	6	-269	-487	0	318	multi-exon	FALSE	canonical	1	4	junction_5	105.973581613532	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCTCCCCTTTTCATTA	428	False	NA	-2	True	AATAAA	-17	NA	81810441	81800283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809428
ENSMUST00000230844.2	chr15	-	760	7	FSM	ENSMUSG00000016637.8	ENSMUST00000230844.2	760	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	131.776852629318	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGGCTTCTGTTCTTAGT	NA	False	NA	-2	True	AATAAA	-14	NA	78057673	78043662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057587
ENSMUST00000230849.2	chr15	-	1412	1	FSM	ENSMUSG00000063765.13	ENSMUST00000230849.2	1412	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCCCTCGGTGCCCCGC	6747	False	NA	NA	False	NA	NA	NA	81579736	81578324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_81578300_81579700
ENSMUST00000230881.2	chr15	+	406	2	FSM	ENSMUSG00000022575.6	ENSMUST00000230881.2	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTAACTGGGCATGTTC	NA	False	NA	NA	False	NA	NA	NA	75734212	75735541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75734331_75735253
ENSMUST00000230882.2	chr15	+	3263	9	FSM	ENSMUSG00000072501.6	ENSMUST00000230882.2	3263	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	13.8834433769148	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	3830	False	NA	NA	False	AATAAA	-16	NA	66449408	66483465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
ENSMUST00000230884.2	chr15	-	723	2	FSM	ENSMUSG00000022570.8	ENSMUST00000230884.2	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCCAGGGGCAACAAGC	8928	False	NA	NA	False	AATACA	-25	NA	75801593	75800267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75800899_75801501
ENSMUST00000230909.2	chr15	-	2811	8	FSM	ENSMUSG00000037185.10	ENSMUST00000230909.2	2811	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.05038572777248	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATAATGTTGCTGTGCA	8287	False	NA	NA	False	AATAAA	-17	NA	101262459	101246203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_101247921_101248049_101248106_101248876_101249098_101249554_101249681_101250057_101250223_101256527_101256624_101257360_101257422_101262090
ENSMUST00000230958.2	chr16	-	2913	4	FSM	ENSMUSG00000022789.16	ENSMUST00000230958.2	2913	4	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_3	158.394724940223	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGCCAGTAAGTGAATT	NA	False	NA	-23	True	AATAAA	-13	NA	16135310	16130109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465
ENSMUST00000230968.2	chr15	-	769	5	FSM	ENSMUSG00000002524.18	ENSMUST00000230968.2	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	454.04205477026	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTGCCCAGGCTCTTG	NA	False	NA	NA	False	NA	NA	NA	75952773	75946100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUST00000230977.2	chr15	-	2222	12	FSM	ENSMUSG00000063354.8	ENSMUST00000230977.2	2750	12	536	-8	0	0	multi-exon	FALSE	canonical	3	334	junction_11	41.2272476696326	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8666	False	NA	-2	True	AATAAA	-21	NA	76501048	76496582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ENSMUST00000230980.2	chr16	-	2151	19	FSM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_17	350.006349148761	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACTGTTTGATATCCA	NA	False	NA	NA	False	NA	NA	NA	16176729	16131850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ENSMUST00000230980.2-0	chr16	-	3994	19	FSM	ENSMUSG00000022789.16	ENSMUST00000230980.2	2151	19	-94	-1749	0	0	multi-exon	FALSE	canonical	3	32	junction_17	350.006349148761	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
ENSMUST00000231001.2	chr15	+	2153	6	FSM	ENSMUSG00000037353.10	ENSMUST00000231001.2	2153	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	5.31413210223457	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGGAATTACTTATG	5719	False	NA	27	True	AGTAAA	-16	NA	100370287	100377045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUST00000231013.2	chr2	-	1544	7	FSM	ENSMUSG00000056486.19	ENSMUST00000231013.2	1544	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	112.00248013127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	1012	False	NA	59	True	ATTAAA	-23	NA	73462907	73442679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73462805
ENSMUST00000231024.2	chr15	-	655	3	FSM	ENSMUSG00000116295.2	ENSMUST00000231024.2	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	244.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGATCATACCATAGC	NA	False	NA	-10	True	AATAAA	-17	NA	97065125	97058813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_97059277_97064383_97064508_97065057
ENSMUST00000231030.2	chr15	-	888	8	FSM	ENSMUSG00000023044.3	ENSMUST00000231030.2	888	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	45.5434307187398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGAGAAGGGGGCTTC	6292	False	NA	NA	False	NA	NA	NA	102112668	102096000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102110878_102111010_102111571_102111696_102112573
ENSMUST00000231039.2	chr15	-	3923	15	FSM	ENSMUSG00000022464.15	ENSMUST00000231039.2	3923	15	0	0	0	0	multi-exon	FALSE	canonical	3	1416	junction_8	96.7698721879145	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATGATCTTCTTTCGT	NA	False	NA	-9	True	AATAAA	-19	NA	96917832	96892700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907020_96907827_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604
ENSMUST00000231066.2	chr15	-	1980	9	FSM	ENSMUSG00000022992.18	ENSMUST00000231066.2	1980	9	0	0	0	0	multi-exon	FALSE	canonical	1	77	junction_8	414.912038870891	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432145	98416700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98432121
ENSMUST00000231067.2	chr15	-	3262	13	FSM	ENSMUSG00000022614.9	ENSMUST00000231067.2	3262	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.3126471544375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239815	89235341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766
ENSMUST00000231074.2	chr15	+	2692	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_6	54.9377829913076	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7338	False	NA	30	True	ATTAAA	-41	NA	85744146	85760774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ENSMUST00000231106.2	chr15	+	2459	1	FSM	ENSMUSG00000116508.2	ENSMUST00000231106.2	2459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCACCTGAGACTCTGC	NA	False	NA	NA	False	AATAAA	-18	NA	83056550	83059009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_83056600_83059000
ENSMUST00000231141.2	chr15	+	1541	9	FSM	ENSMUSG00000046434.17	ENSMUST00000231141.2	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	4388.75483480224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148920	103153382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152385_103152456_103152682
ENSMUST00000231152.2	chr15	-	1271	2	FSM	ENSMUSG00000053929.18	ENSMUST00000231152.2	1271	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTTGTTTATTCTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	76543956	76542332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76543066_76543418
ENSMUST00000231160.2	chr15	+	3935	16	FSM	ENSMUSG00000023025.17	ENSMUST00000231160.2	3935	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	158.291657673072	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGTTAAAATTACATTAC	NA	False	NA	NA	False	ATTAAA	-13	NA	99870798	99911795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_99870865_99882813_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ENSMUST00000231184.2	chr15	-	3103	11	FSM	ENSMUSG00000016664.17	ENSMUST00000231184.2	3103	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	180.758512939225	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTTGCATCCACCC	NA	False	NA	0	True	AATAAA	-27	NA	83317025	83260322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316952
ENSMUST00000231200.2	chr15	+	6457	3	FSM	ENSMUSG00000075470.3	ENSMUST00000231200.2	6457	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGAATATATTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	90108551	90117674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_90108812_90109859_90110058_90111675
ENSMUST00000231241.2	chr17	+	1571	7	FSM	ENSMUSG00000036552.20	ENSMUST00000231241.2	1571	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	30.7064958744707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGAACTCTATGTTGC	NA	False	NA	5	True	ATTAAA	-18	NA	15273320	15284485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ENSMUST00000231245.2	chr16	-	838	9	FSM	ENSMUSG00000022771.18	ENSMUST00000231245.2	838	9	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_5	36.2689605585823	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTAGCTCTGGTGGGACT	NA	False	NA	NA	False	NA	NA	NA	16929079	16913624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUST00000231252.2	chr13	-	2308	6	FSM	ENSMUSG00000021765.10	ENSMUST00000231252.2	1113	6	-143	-1052	-143	0	multi-exon	FALSE	canonical	2	2	junction_2	7.29383301152419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAAATGT	NA	False	NA	NA	False	TATAAA	-36	NA	114595265	114588825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_114590042_114590815_114591044_114591656_114591882_114592219_114592439_114592898_114593091_114595037
ENSMUST00000231256.2	chr16	-	2735	2	FSM	ENSMUSG00000046962.17	ENSMUST00000231256.2	2735	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTTGGGATGAATT	9448	False	NA	-4	True	AATAAA	-24	NA	97754298	97750963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97752070_97752669
ENSMUST00000231259.2	chr16	-	1722	7	FSM	ENSMUSG00000004843.8	ENSMUST00000231259.2	1722	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	119.881422895941	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCCTAACGCGCATCA	NA	False	NA	-8	True	AATAAA	-19	NA	65359406	65336013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65350904_65350961_65359360
ENSMUST00000231263.2	chr16	-	3663	3	FSM	ENSMUSG00000046962.17	ENSMUST00000231263.2	889	3	-8	-2766	0	0	multi-exon	FALSE	canonical	2	6	junction_2	40	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTTGGGATGAATT	NA	False	NA	-4	True	AATAAA	-24	NA	97763809	97750963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97754294_97757957_97758095_97763613
ENSMUST00000231268.2	chr16	-	2142	5	FSM	ENSMUSG00000116673.2	ENSMUST00000231268.2	2142	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.3683503111768	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAGGAAGGGCA	NA	False	NA	NA	False	NA	NA	NA	97883650	97863711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97865439_97867743_97867866_97868954_97869016_97869203_97869331_97883545
ENSMUST00000231304.2	chr16	-	7540	3	FSM	ENSMUSG00000048490.15	ENSMUST00000231304.2	540	3	-5	-6995	0	-332	multi-exon	FALSE	canonical	2	16	junction_1	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAAATGGCTTCTTTTTT	NA	False	NA	-4	True	AATAAA	-22	NA	76169937	76084619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_76091904_76149359_76149438_76169759
ENSMUST00000231322.2	chr16	+	1503	6	FSM	ENSMUSG00000055692.22	ENSMUST00000231322.2	1503	6	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	34.92506263416	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094540	17096525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ENSMUST00000231341.2	chr17	-	1970	5	FSM	ENSMUSG00000014769.11	ENSMUST00000231341.2	1970	5	0	0	0	0	multi-exon	FALSE	canonical	3	4315	junction_3	328.285698744249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718601	15696220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUST00000231351.2	chr16	-	640	5	FSM	ENSMUSG00000003955.9	ENSMUST00000231351.2	640	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	448.847621693599	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTCTTTGTTTTGTT	NA	False	NA	-5	True	AATACA	-14	NA	35891739	35864215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891686
ENSMUST00000231355.2	chr17	+	2194	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	12.3917535302941	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTATGAATGTAATTAATG	6224	False	NA	NA	False	NA	NA	NA	17455133	17486325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ENSMUST00000231358.2	chr17	+	1646	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231358.2	805	5	-94	-747	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2326.54082008032	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775547	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775684_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUST00000231360.2	chr16	-	6332	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	8.64670064815276	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTCTGTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	31822105	31778489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ENSMUST00000231364.2	chr16	+	4601	12	FSM	ENSMUSG00000022833.8	ENSMUST00000231364.2	4601	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	44.5960751339776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGTTTTACCTTAGTA	NA	False	NA	NA	False	AATAAA	-27	NA	34510985	34544937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34527268_34529893_34530036_34535707_34535779_34541808_34542018_34542106_34542240_34543379
ENSMUST00000231376.2	chr17	+	975	3	FSM	ENSMUSG00000116802.2	ENSMUST00000231376.2	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	15	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATACTGGAGAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	17482611	17485132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17482867_17483108_17483170_17484473
ENSMUST00000231380.2	chr16	-	1852	11	FSM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_10	453.295984981116	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTTGATTTTTTTTTT	NA	False	NA	-2	True	AATAAA	-22	NA	91443813	91430292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ENSMUST00000231382.2	chr16	+	452	2	FSM	ENSMUSG00000116947.2	ENSMUST00000231382.2	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAACCCACTTACAAGGA	2864	False	NA	NA	False	NA	NA	NA	93812299	93813095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93812370_93812713
ENSMUST00000231389.2	chr16	+	2457	13	FSM	ENSMUSG00000022808.6	ENSMUST00000231389.2	2457	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	155.567844256667	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTATTATTTTAAGAT	9283	False	NA	26	True	AATAAA	-26	NA	33071813	33119935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101095_33106313_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUST00000231414.2	chr16	-	806	8	FSM	ENSMUSG00000022938.9	ENSMUST00000231414.2	806	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	10.770329614269	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGTCACAGGAGTCT	NA	False	NA	-10	True	AATAAA	-24	NA	97313730	97272289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97272424_97276447_97276581_97276934_97277023_97277579_97277631_97279548_97279608_97282986_97283111_97302059_97302204_97313657
ENSMUST00000231424.2	chr16	-	895	4	FSM	ENSMUSG00000022760.18	ENSMUST00000231424.2	895	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	43.6882898116494	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAGACTCTGAAGGACCA	7531	False	NA	NA	False	NA	NA	NA	17348655	17346114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348547
ENSMUST00000231432.2	chr16	+	1810	5	FSM	ENSMUSG00000022779.17	ENSMUST00000231432.2	1810	5	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	25.321680433968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCTGGAACAAAGAGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	16705702	16710839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUST00000231444.2	chr16	-	439	3	FSM	ENSMUSG00000022962.16	ENSMUST00000231444.2	439	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	1083	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTGAACTCGTAGTTG	NA	False	NA	NA	False	NA	NA	NA	91443817	91438528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91438578_91439844_91440032_91443614
ENSMUST00000231504.2	chr16	-	1455	1	FSM	ENSMUSG00000116632.2	ENSMUST00000231504.2	1455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTTGCACAGTT	NA	False	NA	NA	False	AATAAA	-16	NA	21152106	21150651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21150700_21152100
ENSMUST00000231523.2	chr16	+	506	3	FSM	ENSMUSG00000075229.12	ENSMUST00000231523.2	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_1	36	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATCTTGAGAAGCCATT	NA	False	NA	NA	False	NA	NA	NA	35892453	35905712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35892508_35903060_35903187_35905386
ENSMUST00000231531.2	chr16	-	1280	8	FSM	ENSMUSG00000033809.16	ENSMUST00000231531.2	1280	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.566795667838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAAGTTAGTGGTTGCT	NA	False	NA	6	True	AATAAA	-29	NA	20430485	20424207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20430323
ENSMUST00000231536.2	chr16	-	935	2	FSM	ENSMUSG00000022771.18	ENSMUST00000231536.2	935	2	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTATGTGAATCCAGGT	NA	False	NA	NA	False	NA	NA	NA	16929096	16926713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16927559_16929006
ENSMUST00000231548.2	chr16	-	1110	5	FSM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	41.2757495389242	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTTTGGCTTGGCTGG	7275	False	NA	1	True	AATAAA	-19	NA	17348911	17345941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348841
ENSMUST00000231579.2	chr16	+	1703	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_3	35.6118531058502	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCAGCCACTTCCAAAT	5404	False	NA	107	True	NA	NA	NA	35590744	35645918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ENSMUST00000231592.2	chr16	-	1135	2	FSM	ENSMUSG00000043391.11	ENSMUST00000231592.2	1135	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTCTCCTGTTTGCT	NA	False	NA	3	True	AATAAA	-30	NA	21513379	21495471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21496193_21512965
ENSMUST00000231609.2	chr16	+	3999	13	FSM	ENSMUSG00000022833.8	ENSMUST00000231609.2	3999	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	18.9487613198213	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTTACTTATTTTGA	NA	False	NA	15	True	AATATA	-24	NA	34511101	34545572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUST00000231629.2	chr16	+	4576	2	FSM	ENSMUSG00000006134.5	ENSMUST00000231629.2	780	2	-489	-3307	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTGTTTCAGTGTCTC	3459	False	NA	20	True	AATAAA	-27	NA	17269850	17305298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17270653_17301524
ENSMUST00000231681.2	chr16	-	1156	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_4	26.8824602048746	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943004	16931262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
ENSMUST00000231700.2	chr16	-	5751	5	FSM	ENSMUSG00000036304.15	ENSMUST00000231700.2	5751	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	18.5067555233217	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800154	43785395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799821
ENSMUST00000231712.2	chr16	-	1768	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	-15	1335	0	0	multi-exon	FALSE	canonical	3	631	junction_7	49.1072657119735	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGGTCCAGTTTGAGC	NA	False	NA	-35	True	AATAAA	-13	NA	16929121	16906514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUST00000231724.2	chr16	+	2135	17	FSM	ENSMUSG00000022855.10	ENSMUST00000231724.2	2135	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	111.888616489793	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTTGAAACCCTGTTT	2230	False	NA	NA	False	NA	NA	NA	21828261	21865616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUST00000231724.2-0	chr16	+	3150	17	FSM	ENSMUSG00000022855.10	ENSMUST00000231724.2	2135	17	0	-1015	0	0	multi-exon	FALSE	canonical	3	37	junction_2	111.888616489793	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2230	False	NA	22	True	AATAAA	-22	NA	21828261	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21828493_21830243_21830370_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUST00000231737.2	chr16	+	969	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGCGTGCTCGCCCTCT	NA	False	NA	NA	False	NA	NA	NA	24348143	24349112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_24348100_24349100
ENSMUST00000231741.2	chr16	-	1556	5	FSM	ENSMUSG00000116673.2	ENSMUST00000231741.2	1556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.7204586978184	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTAGCTCAGAATGG	NA	False	NA	NA	False	NA	NA	NA	97883650	97866643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97867866_97868954_97869016_97869203_97869331_97870510_97870552_97883545
ENSMUST00000231742.2	chr17	-	1523	6	FSM	ENSMUSG00000024213.15	ENSMUST00000231742.2	1523	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	169.03088475187	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCTCTTTGTTCCAT	9851	False	NA	-23	True	AATAAA	-18	NA	27816189	27798360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27799329_27799749_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27816054
ENSMUST00000231756.2	chr16	-	375	1	FSM	ENSMUSG00000116648.2	ENSMUST00000231756.2	375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCTGCTCATGTCAAATA	NA	False	NA	NA	False	NA	NA	NA	16637987	16637612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16637600_16638000
ENSMUST00000231762.2	chr16	+	1072	3	FSM	ENSMUSG00000051483.10	ENSMUST00000231762.2	593	3	-52	-427	0	0	multi-exon	FALSE	canonical	1	5	junction_2	210.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAAATGTTTTTAAGTT	NA	False	NA	15	True	AATAAA	-27	NA	93404724	93407232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93405143_93405676_93405785_93406686
ENSMUST00000231766.2	chr16	-	2118	10	FSM	ENSMUSG00000044626.14	ENSMUST00000231766.2	2118	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	59.9637750728526	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	21814190	21774142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786903_21792807_21792892_21794982_21795085_21800085_21800195_21802650_21803019_21814070
ENSMUST00000231768.2	chr16	+	1572	8	FSM	ENSMUSG00000022871.14	ENSMUST00000231768.2	1572	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	190.973018716129	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGGAAATGAGACTAA	NA	False	NA	35	True	AATAAA	-41	NA	22737083	22758528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22737345_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUST00000231775.2	chr16	-	443	2	FSM	ENSMUSG00000022962.16	ENSMUST00000231775.2	443	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGTGTTGTAGATTCAT	NA	False	NA	NA	False	NA	NA	NA	91443800	91439617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91440032_91443771
ENSMUST00000231798.2	chr16	+	2883	16	FSM	ENSMUSG00000022855.10	ENSMUST00000231798.2	2883	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	119.348341700531	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2371	False	NA	22	True	AATAAA	-22	NA	21828402	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21828493_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUST00000231825.2	chr17	+	1717	6	FSM	ENSMUSG00000046711.17	ENSMUST00000231825.2	1717	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	2331.48484876055	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775588	27782643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775686_27775925_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUST00000231849.2	chr16	-	665	2	FSM	ENSMUSG00000097318.3	ENSMUST00000231849.2	665	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGAATTCTCTCCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	33201045	33200223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_33200729_33200885
ENSMUST00000231874.2	chr17	+	2001	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231874.2	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	2057.89800221002	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCTGGTGTAAGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	27775577	27782643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ENSMUST00000231881.2	chr16	-	933	1	FSM	ENSMUSG00000022820.5	ENSMUST00000231881.2	933	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACATATTCTCTATCAT	NA	False	NA	NA	False	AATAAA	-16	NA	37474728	37473795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_37473800_37474700
ENSMUST00000231904.2	chr16	-	1239	8	FSM	ENSMUSG00000033809.16	ENSMUST00000231904.2	1239	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	139.378650313688	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAACGGACTCTGTG	NA	False	NA	-55	True	NA	NA	NA	20429511	20424268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20429329
ENSMUST00000231913.2	chr16	+	1230	5	FSM	ENSMUSG00000080717.11	ENSMUST00000231913.2	1230	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	45.9292934846597	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	14	True	NA	NA	NA	97798563	97817956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97817041
ENSMUST00000231926.2	chr16	-	3337	15	FSM	ENSMUSG00000033581.18	ENSMUST00000231926.2	3337	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	285.092179865405	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7532	False	NA	NA	False	NA	NA	NA	21940024	21877823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21939946
ENSMUST00000231948.2	chr17	-	608	4	FSM	ENSMUSG00000062753.15	ENSMUST00000231948.2	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	112.499876543142	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	False	NA	47	True	AATAAA	-16	NA	27784700	27782744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27782991_27783122_27783229_27783535_27783725_27784633
ENSMUST00000231984.2	chr8	-	2905	19	FSM	ENSMUSG00000037300.20	ENSMUST00000231984.2	2905	19	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	106.569342173807	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448707	125398070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUST00000231993.2	chr16	-	615	1	FSM	ENSMUSG00000116835.2	ENSMUST00000231993.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGTGATATTTGTAAAA	NA	False	NA	NA	False	NA	NA	NA	33827827	33827212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_33827200_33827800
ENSMUST00000232045.2	chr15	+	848	1	FSM	ENSMUSG00000022338.9	ENSMUST00000232045.2	848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGGGAAAAAAATCCTAT	NA	False	NA	NA	False	NA	NA	NA	44296555	44297403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_44296600_44297400
ENSMUST00000232075.2	chr16	-	2645	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	25.2214680179325	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	22676417	22631969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ENSMUST00000232092.2	chr16	+	1627	8	FSM	ENSMUSG00000055692.22	ENSMUST00000232092.2	1627	8	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	39.2189042297154	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094172	17096525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ENSMUST00000232100.2	chr16	+	4475	13	FSM	ENSMUSG00000022807.10	ENSMUST00000232100.2	4475	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGTGTTGGGAAAATTG	NA	False	NA	-41	True	AATAAA	-19	NA	33005440	33063636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ENSMUST00000232101.2	chr13	-	593	4	FSM	ENSMUSG00000021764.9	ENSMUST00000232101.2	716	4	-30	153	0	0	multi-exon	FALSE	canonical	3	49	junction_1	693.907454604399	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACACTTGGCAGTTTCTA	NA	False	NA	-18	True	AATAAA	-19	NA	114524616	114425183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_114425403_114453392_114453566_114487983_114488063_114524494
ENSMUST00000232105.2	chr12	+	405	2	FSM	ENSMUSG00000090370.5	ENSMUST00000232105.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGTCTCTACAAAGAT	NA	False	NA	NA	False	NA	NA	NA	21040538	21063057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_21040874_21062987
ENSMUST00000232106.2	chr17	+	1399	6	FSM	ENSMUSG00000094724.9	ENSMUST00000232106.2	1399	6	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_3	24.1743665894269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAATTTGGGATCAAGCC	NA	False	NA	NA	False	AATACA	-32	NA	7246326	7262034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_7246498_7248506_7248568_7251537_7252513_7256120_7256192_7259079_7259194_7262027
ENSMUST00000232137.2	chr16	+	3255	10	FSM	ENSMUSG00000053774.10	ENSMUST00000232137.2	4384	10	-11	1140	0	-1140	multi-exon	FALSE	canonical	3	7	junction_3	51.2071561357021	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTGAGTCAAAGTTCT	8252	False	NA	NA	False	NA	NA	NA	32151074	32205573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ENSMUST00000232143.2	chr16	-	1682	7	FSM	ENSMUSG00000009097.11	ENSMUST00000232143.2	1682	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.97905701450632	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCGGGCGGTGTAGATA	7740	False	NA	NA	False	NA	NA	NA	18405719	18400553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_18401207_18401473_18401575_18401656_18401725_18402168_18402325_18402833_18403006_18403784_18403887_18405289
ENSMUST00000232157.2	chr16	-	2690	16	FSM	ENSMUSG00000061751.17	ENSMUST00000232157.2	2690	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.74157910944379	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGTTTTAATGAGGTCA	NA	False	NA	-10	True	AATAAA	-12	NA	33916398	33833515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
ENSMUST00000232179.2	chr9	-	9787	64	FSM	ENSMUSG00000034218.17	ENSMUST00000232179.2	9787	64	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	19.494751895675	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGAGAGCATGTCACAC	NA	False	NA	32	True	NA	NA	NA	53448040	53350667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368792_53370102_53370277_53371012_53371248_53372190_53372311_53372411_53372421_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
ENSMUST00000232180.2	chr17	+	7309	20	FSM	ENSMUSG00000069729.15	ENSMUST00000232180.2	7309	20	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	8.75742660692188	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTGAAAGGAAAAATTGATT	NA	False	NA	NA	False	AAAAAG	-39	NA	5045213	5393780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_5046768_5090854_5091050_5147848_5148008_5177188_5177300_5293102_5293347_5314306_5314397_5329477_5329658_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUST00000232181.2	chr16	+	4475	13	FSM	ENSMUSG00000022807.10	ENSMUST00000232100.2	4475	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	9.04118662320138	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGTGTTGGGAAAATTG	NA	False	NA	-41	True	AATAAA	-19	NA	33005440	33063636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ENSMUST00000232187.2	chr16	-	1452	3	FSM	ENSMUSG00000046962.17	ENSMUST00000232187.2	1452	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	12.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTTGGGATGAATT	NA	False	NA	-4	True	AATAAA	-24	NA	97763793	97750963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_97752070_97754127_97754294_97763613
ENSMUST00000232188.2	chr16	+	443	5	FSM	ENSMUSG00000060636.15	ENSMUST00000232188.2	443	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3515.29062632096	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTGTATTTTTTTTTC	NA	False	NA	0	True	AATAAA	-15	NA	32876868	32880525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32876926_32877505_32877536_32877759_32877913_32879048_32879194_32880467
ENSMUST00000232198.2	chr16	+	1167	7	FSM	ENSMUSG00000022957.21	ENSMUST00000232198.2	1167	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.24893144826965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTATGGTCTCATCATGG	NA	False	NA	NA	False	NA	NA	NA	91700950	91709088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_91701102_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ENSMUST00000232232.2	chr16	-	6630	55	FSM	ENSMUSG00000041720.15	ENSMUST00000232232.2	6630	55	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_39	24.3659232686811	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGTTTTGTTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	17223757	17098215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ENSMUST00000232236.2	chr16	-	3404	18	FSM	ENSMUSG00000012114.18	ENSMUST00000232236.2	3404	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	67.9646254416125	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540811	17469084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17470128_17470568_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUST00000232239.2	chr16	-	2319	4	FSM	ENSMUSG00000022951.17	ENSMUST00000232239.2	2319	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	18.4932420089069	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACGTTGTTGGTCGTTTT	NA	False	NA	-5	True	AATAAA	-22	NA	92263031	92188842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
ENSMUST00000232253.2	chr17	+	1637	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232253.2	600	5	12	-1049	0	0	multi-exon	FALSE	canonical	3	289	junction_4	2144.39797787164	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775626	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775724_27778506_27778678_27779901_27779986_27780434_27780486_27781414
ENSMUST00000232265.2	chr17	+	1681	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	0	0	0	0	multi-exon	FALSE	canonical	3	3635	junction_2	873.596123789477	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775547	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ENSMUST00000232289.2	chr16	-	3276	22	FSM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_21	338.409230453656	2438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443819	91418291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ENSMUST00000232300.2	chr16	+	3844	8	FSM	ENSMUSG00000022800.15	ENSMUST00000232300.2	2262	8	6	-1588	0	-843	multi-exon	FALSE	canonical	3	485	junction_4	66.7529713471503	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTATTCTGAGCTATAA	NA	False	NA	-5	True	AATAAA	-18	NA	32698182	32728402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUST00000232308.2	chr16	+	1320	6	FSM	ENSMUSG00000080717.11	ENSMUST00000232308.2	669	6	-10	-641	0	0	multi-exon	FALSE	canonical	2	6	junction_4	50.8409283943557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	14	True	NA	NA	NA	97798523	97817956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97811318_97811369_97816865_97816920_97817041
ENSMUST00000232312.2	chr16	-	469	2	FSM	ENSMUSG00000012114.18	ENSMUST00000232312.2	469	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCGGCAGTGAGCTCCACC	NA	False	NA	NA	False	NA	NA	NA	17540779	17520704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17521014_17540619
ENSMUST00000232321.2	chr16	-	818	6	FSM	ENSMUSG00000023791.19	ENSMUST00000232321.2	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	141.720287891325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTTTGTCTTCATT	NA	False	NA	0	True	AATAAA	-30	NA	31918558	31903233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918472
ENSMUST00000232328.2	chr17	+	1598	4	FSM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.55777733351102	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATACTGGAGAGAAACCC	NA	False	NA	NA	False	NA	NA	NA	17171813	17193939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17171971_17191161_17191289_17191432_17191494_17192686
ENSMUST00000232328.2-0	chr17	+	2078	4	FSM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	0	-480	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.55777733351102	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCAAGTGGCCTACTC	NA	False	NA	24	True	NA	NA	NA	17171813	17194419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17171971_17191161_17191289_17191432_17191494_17192686
ENSMUST00000232353.2	chr15	+	849	3	FSM	ENSMUSG00000022338.9	ENSMUST00000232353.2	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	134	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACTCATTTGTAACAA	9566	False	NA	NA	False	NA	NA	NA	44291437	44296404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_44291639_44292955_44293033_44295833
ENSMUST00000232354.2	chr17	+	3906	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232354.2	1041	5	6	-2871	0	0	multi-exon	FALSE	canonical	3	24	junction_4	15.2807067899361	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTCTTTTGTTTGT	NA	False	NA	13	True	AGTAAA	-24	NA	21229218	21249123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ENSMUST00000232356.2	chr16	-	2375	1	FSM	ENSMUSG00000097313.3	ENSMUST00000232356.2	2375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	29765572	29763197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_29763200_29765600
ENSMUST00000232371.2	chr16	-	4367	20	FSM	ENSMUSG00000022983.17	ENSMUST00000232371.2	4367	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	57.9041619122408	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTTAATGTGTGCT	NA	False	NA	NA	False	AATAAA	-13	NA	90081391	90025844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ENSMUST00000232379.2	chr16	+	2621	18	FSM	ENSMUSG00000022761.13	ENSMUST00000232379.2	2621	18	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	15.4671210608191	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAAGGTGTTCTTTGGCTC	NA	False	NA	NA	False	NA	NA	NA	17326836	17342677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171
ENSMUST00000232383.2	chr17	+	4499	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	255.117367291508	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6307134	6358589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ENSMUST00000232387.2	chr16	+	546	5	FSM	ENSMUSG00000080717.11	ENSMUST00000232387.2	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	48.9508682251909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGTCTTAGCTACAT	NA	False	NA	NA	False	NA	NA	NA	97798526	97832636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97832442
ENSMUST00000232396.2	chr17	+	1596	8	FSM	ENSMUSG00000116564.2	ENSMUST00000232396.2	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_3	41.8120185826896	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATTTGTCTTTTGAA	NA	False	NA	NA	False	AATGAA	-20	NA	17594833	17608016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325
ENSMUST00000232413.2	chr16	-	529	2	FSM	ENSMUSG00000022748.9	ENSMUST00000232413.2	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTATGTTTTGTGAT	NA	False	NA	-1	True	AATAAA	-17	NA	57427227	57381795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_57382126_57427028
ENSMUST00000232417.2	chr16	+	3697	17	FSM	ENSMUSG00000005899.15	ENSMUST00000232417.2	5017	17	-6	1326	0	154	multi-exon	FALSE	canonical	3	228	junction_11	24.7736629306205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGGCTGAATCTTTA	NA	False	NA	6	True	AATAAA	-19	NA	17437220	17461365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUST00000232423.2	chr16	-	2785	10	FSM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	33.1126025018337	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTTCTATCAATTGT	NA	False	NA	0	True	NA	NA	NA	17729179	17718572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ENSMUST00000232441.2	chr16	+	383	1	FSM	ENSMUSG00000116939.2	ENSMUST00000232441.2	383	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTCTGGTGTGTACACA	7365	False	NA	NA	False	NA	NA	NA	93816800	93817183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_93816800_93817200
ENSMUST00000232448.2	chr16	+	2447	8	FSM	ENSMUSG00000072419.6	ENSMUST00000232448.2	2447	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	195.358069989965	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCAGCTCACTCGCCTG	NA	False	NA	NA	False	AATACA	-17	NA	48124270	48140086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_48124570_48130639_48130903_48131937_48132074_48134245_48134398_48134491_48134546_48136024_48136281_48137650_48137847_48138995
ENSMUST00000232458.2	chr16	-	1319	9	FSM	ENSMUSG00000033809.16	ENSMUST00000232458.2	1319	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	138.472695864564	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGGAACGGACTCTGTG	NA	False	NA	-55	True	NA	NA	NA	20430485	20424268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20430323
ENSMUST00000232483.2	chr12	+	654	4	FSM	ENSMUSG00000116606.2	ENSMUST00000232483.2	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	49.1008033426021	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCTTTGCACAACTCA	NA	False	NA	NA	False	NA	NA	NA	20476913	20485418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_20476993_20483306_20483434_20483635_20483697_20485031
ENSMUST00000232523.2	chr16	+	1972	11	FSM	ENSMUSG00000022779.17	ENSMUST00000232523.2	1972	11	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_7	22.3966515354416	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16702075	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUST00000232531.2	chr16	+	3508	6	FSM	ENSMUSG00000022779.17	ENSMUST00000232531.2	3508	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	63.4457248362725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGAAAGCTTTACAA	NA	False	NA	NA	False	NA	NA	NA	16688649	16703329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364
ENSMUST00000232552.2	chr17	+	1607	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232552.2	917	5	12	-702	0	0	multi-exon	FALSE	canonical	3	1035	junction_1	1979.76797882984	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775626	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUST00000232568.2	chr16	+	4187	17	FSM	ENSMUSG00000075254.13	ENSMUST00000232568.2	4187	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	3.21130814466628	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAGACAGAGGGAGGCCC	6823	False	NA	NA	False	NA	NA	NA	33504739	33587183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_33505226_33530769_33531070_33539876_33540216_33541018_33541373_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ENSMUST00000232573.2	chr16	-	365	2	FSM	ENSMUSG00000022751.10	ENSMUST00000232573.2	365	2	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGTTTTGAACAAGATC	NA	False	NA	NA	False	NA	NA	NA	56987704	56986275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_56986580_56987643
ENSMUST00000232581.2	chr16	+	2950	19	FSM	ENSMUSG00000022779.17	ENSMUST00000232581.2	2950	19	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	102.489023802552	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGAGCCTGGGACCTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	16688620	16710849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUST00000232611.2	chr16	+	2390	9	FSM	ENSMUSG00000063358.18	ENSMUST00000232611.2	2390	9	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_8	172.340097989412	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGCTCTGTTGCCAA	NA	False	NA	NA	False	AATAAA	-23	NA	16801245	16862613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856299_16861549
ENSMUST00000232615.2	chr16	-	556	3	FSM	ENSMUSG00000049916.13	ENSMUST00000232615.2	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	25	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGTGAAAACCTCCATC	NA	False	NA	NA	False	NA	NA	NA	16936061	16931443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_16931491_16935343_16935449_16935657
ENSMUST00000232635.2	chr16	-	1184	4	FSM	ENSMUSG00000022856.10	ENSMUST00000232635.2	1184	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	70.6304938866115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGCAGGTTCTGAATG	9211	False	NA	-3	True	ATTAAA	-15	NA	21766281	21753076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21766117
ENSMUST00000232643.2	chr16	-	582	3	FSM	ENSMUSG00000022962.16	ENSMUST00000232643.2	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	815.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	5231	False	NA	NA	False	AATAAA	-12	NA	91419905	91418291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_91418633_91418734_91418851_91419780
ENSMUST00000232660.2	chr16	+	8298	45	FSM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_36	31.5577245589545	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGATCTTAACCAAGGAT	NA	False	NA	NA	False	NA	NA	NA	94183766	94270202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ENSMUST00000232663.2	chr17	+	2127	5	FSM	ENSMUSG00000067942.7	ENSMUST00000232663.2	552	5	-87	-1488	0	0	multi-exon	FALSE	canonical	2	12	junction_4	19.0394327646598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCACATAAGTTCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	21229218	21263306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21229371_21231937_21232035_21240333_21240461_21240967_21241097_21261684
ENSMUST00000232681.2	chr16	-	1371	4	FSM	ENSMUSG00000004462.8	ENSMUST00000232681.2	1371	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	30.539591789457	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGCCTTTGTTAGGA	NA	False	NA	NA	False	NA	NA	NA	22676292	22644244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUST00000232683.2	chr16	+	609	2	FSM	ENSMUSG00000117327.2	ENSMUST00000232683.2	609	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTCTGGTCCCATCT	NA	False	NA	NA	False	NA	NA	NA	21715255	21715866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_21715682_21715683
ENSMUST00000232684.2	chr17	+	2184	10	FSM	ENSMUSG00000007603.10	ENSMUST00000232684.2	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_5	34.159032570798	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGGCTCTCCTTGTG	NA	False	NA	11	True	NA	NA	NA	57072733	57077092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ENSMUST00000232687.2	chr17	-	694	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	2414	junction_1	149.934059580278	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATAGTTGTTGTATA	NA	False	NA	-18	True	AATAAA	-16	NA	74623198	74606476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
ENSMUST00000232702.2	chr17	-	581	3	FSM	ENSMUSG00000055839.7	ENSMUST00000232702.2	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	11428	junction_1	404.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTACTGCATTTCTCATT	NA	False	NA	-10	True	AGTAAA	-11	NA	24048057	24043718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24043954_24046441_24046548_24047817
ENSMUST00000232734.2	chr17	-	1569	1	FSM	ENSMUSG00000117303.2	ENSMUST00000232734.2	1569	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTGTATCTGACATGC	5036	False	NA	NA	False	AATACA	-16	NA	28547495	28545926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28545900_28547500
ENSMUST00000232766.2	chr17	-	883	4	FSM	ENSMUSG00000024048.16	ENSMUST00000232766.2	883	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1388.00920586124	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	6427	False	NA	-12	True	ATTAAA	-21	NA	71305049	71301281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71305025
ENSMUST00000232770.2	chr17	+	1202	4	FSM	ENSMUSG00000037805.16	ENSMUST00000232770.2	1202	4	0	0	0	0	multi-exon	FALSE	canonical	3	5482	junction_2	1519.39724891155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547589	28550006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28547860_28547940_28548497_28549498_28549672_28549803
ENSMUST00000232774.2	chr17	+	2354	1	FSM	ENSMUSG00000117013.2	ENSMUST00000232774.2	2354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACCATTGTAAATAATGT	NA	False	NA	NA	False	NA	NA	NA	21851705	21854059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_21851700_21854100
ENSMUST00000232840.2	chr17	-	1756	2	FSM	ENSMUSG00000117234.2	ENSMUST00000232840.2	1756	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTCCACTGGAAAAACT	NA	False	NA	NA	False	NA	NA	NA	22288869	22286244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22287883_22288751
ENSMUST00000232846.2	chr17	+	767	1	FSM	ENSMUSG00000117130.2	ENSMUST00000232846.2	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGTGTTTTCTGCTTC	NA	False	NA	NA	False	AATGAA	-21	NA	28201365	28202132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28201400_28202100
ENSMUST00000232870.2	chr16	-	1311	9	FSM	ENSMUSG00000022948.17	ENSMUST00000232870.2	1311	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	42.804789451649	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93396169	93380347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390221_93393185_93393224_93396099
ENSMUST00000232874.2	chr17	+	3530	6	FSM	ENSMUSG00000005936.20	ENSMUST00000232874.2	3530	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	212.274727652634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171444	29188523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29171544_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUST00000232875.2	chr17	-	1342	7	FSM	ENSMUSG00000010592.10	ENSMUST00000232875.2	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_2	40.7130882586369	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAATAATTTGGGAT	NA	False	NA	NA	False	NA	NA	NA	50600627	50592696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
ENSMUST00000232956.2	chr19	-	4728	24	FSM	ENSMUSG00000024812.12	ENSMUST00000232956.2	4728	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	109.045662553534	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAAATGTGTGTATGA	NA	False	NA	NA	False	ATTAAA	-16	NA	24202394	24071868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24072949_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
ENSMUST00000232973.2	chr17	-	2370	2	FSM	ENSMUSG00000117183.2	ENSMUST00000232973.2	2370	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAATGGGACAAATTCTT	NA	False	NA	NA	False	NA	NA	NA	22935918	22932762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22934995_22935780
ENSMUST00000232993.2	chr16	-	1193	4	FSM	ENSMUSG00000022914.18	ENSMUST00000232993.2	1193	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTGTCCACAACAGCAT	NA	False	NA	NA	False	NA	NA	NA	95810213	95805555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_95805909_95806162_95806331_95809036_95809415_95809919
ENSMUST00000233004.2	chr17	-	1001	4	FSM	ENSMUSG00000034868.10	ENSMUST00000233004.2	1001	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1032.1984090065	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTCTGGTTTTGCTGGA	NA	False	NA	-34	True	AATAAA	-37	NA	71285527	71281020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71285358
ENSMUST00000233009.2	chr17	-	1619	9	FSM	ENSMUSG00000062859.16	ENSMUST00000233009.2	1619	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	15.87253917935	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGACGGCCATTCTTCTT	NA	False	NA	-5	True	AATAAA	-14	NA	28298988	28285724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28286143_28286763_28286928_28288156_28288339_28288431_28288647_28289396_28289534_28290584_28290806_28293625_28293747_28296959_28297033_28298900
ENSMUST00000233026.2	chr17	-	355	1	FSM	ENSMUSG00000117187.2	ENSMUST00000233026.2	355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGCCTAGGCCTACCCC	NA	False	NA	NA	False	AATGAA	-13	NA	74745634	74745279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_74745300_74745600
ENSMUST00000233027.2	chr19	-	4668	23	FSM	ENSMUSG00000024812.12	ENSMUST00000233027.2	4668	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_22	83.9099280958925	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAAATGTGTGTATGA	NA	False	NA	NA	False	ATTAAA	-16	NA	24151553	24071868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24151318
ENSMUST00000233034.2	chr17	-	3093	1	FSM	ENSMUSG00000003200.11	ENSMUST00000233034.2	3093	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	56343568	56340475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56340500_56343600
ENSMUST00000233089.2	chr17	-	947	4	FSM	ENSMUSG00000024048.16	ENSMUST00000233089.2	947	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1388.00920586124	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	7174	False	NA	-12	True	ATTAAA	-21	NA	71304302	71301281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71304214
ENSMUST00000233092.2	chr17	+	2821	5	FSM	ENSMUSG00000071068.8	ENSMUST00000233092.2	2094	5	415	-1142	0	1142	multi-exon	FALSE	canonical	1	2	junction_2	1.6583123951777	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTTGTGCTTCCCT	1983	False	NA	3	True	NA	NA	NA	48607382	48618191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_48607625_48609639_48609961_48614907_48615302_48616146_48616254_48616434
ENSMUST00000233102.2	chr17	-	3486	11	FSM	ENSMUSG00000024222.18	ENSMUST00000233102.2	3486	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	176.808964704847	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTAGATGCTGGGAGTA	NA	False	NA	NA	False	TTTAAA	-4	NA	28730331	28618199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28730058
ENSMUST00000233103.2	chr17	-	497	4	FSM	ENSMUSG00000049760.7	ENSMUST00000233103.2	497	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	986.424632476073	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCGGTTTTCTGGTGGG	NA	False	NA	-25	True	AATAAA	-18	NA	56916198	56914619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916156
ENSMUST00000233121.2	chr17	-	2793	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233121.2	2793	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	41.4984632122636	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAGGGCCTCTCAAAT	NA	False	NA	-4	True	AATAAA	-31	NA	47813212	47799206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUST00000233136.2	chr17	-	1289	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	28.055995596109	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	46985278	46978386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUST00000233174.2	chr17	-	1263	8	FSM	ENSMUSG00000023980.8	ENSMUST00000233174.2	1263	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	61.3926805449135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTATTTATTATTATA	NA	False	NA	NA	False	AATAAA	-19	NA	47813212	47794288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47794760_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUST00000233187.2	chr17	-	512	4	FSM	ENSMUSG00000024067.15	ENSMUST00000233187.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	1032.98047738893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTATAGTTGTTGTA	NA	False	NA	-20	True	AATAAA	-14	NA	74623389	74606478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_74606820_74622896_74622945_74623038_74623112_74623339
ENSMUST00000233192.2	chr17	-	1310	6	FSM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	2131	junction_4	73.7276067697847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCCTAAATCTCTTTATC	NA	False	NA	NA	False	NA	NA	NA	47093582	47088443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUST00000233197.2	chr17	+	4196	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	164.609370626217	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171231	29188523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUST00000233210.2	chr17	+	2419	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	120.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTACAGAACTGCTACT	1605	False	NA	8	True	AATAAA	-17	NA	73144307	73157432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_73144704_73153273_73153439_73155574
ENSMUST00000233210.2-0	chr17	+	1194	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	294	931	71	672	multi-exon	FALSE	canonical	3	101	junction_1	120.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGGTCCTCTGTTAC	1899	False	NA	12	True	AATAAA	-12	NA	73144601	73156501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_73144704_73153273_73153439_73155574
ENSMUST00000233247.2	chr17	-	1128	4	FSM	ENSMUSG00000023971.10	ENSMUST00000233247.2	406	4	-17	-705	0	215	multi-exon	FALSE	canonical	3	56	junction_3	166.85522666871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAGGCATGCACCAG	NA	False	NA	NA	False	NA	NA	NA	46985213	46978168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46985122
ENSMUST00000233248.2	chr17	-	2820	11	FSM	ENSMUSG00000010592.10	ENSMUST00000233248.2	2820	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	161.906269180659	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGACTTACTGTCCTG	NA	False	NA	-3	True	AATAAA	-18	NA	50599920	50586422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_50588340_50590155_50590255_50591265_50591380_50592023_50592075_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50599848
ENSMUST00000233274.2	chr17	-	1692	7	FSM	ENSMUSG00000023980.8	ENSMUST00000233274.2	1692	7	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	14.5535409971442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAAACAAAAC	NA	False	NA	NA	False	TATAAA	-27	NA	47813214	47803588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUST00000233297.2	chr16	-	664	3	FSM	ENSMUSG00000040681.17	ENSMUST00000233297.2	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	5886	junction_2	215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCTGTGTGTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	95928666	95927804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_95928404_95928510_95928541_95928631
ENSMUST00000233319.2	chr17	+	2567	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	111.513574706176	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980364	57018764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUST00000233340.2	chr17	+	2137	5	FSM	ENSMUSG00000067150.7	ENSMUST00000233340.2	2137	5	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	19.3180614969515	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGGAAAGAGGTTGAGG	NA	False	NA	NA	False	NA	NA	NA	46513742	46520595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000
ENSMUST00000233357.2	chr17	-	837	4	FSM	ENSMUSG00000117098.2	ENSMUST00000233357.2	837	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1032.1984090065	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGGAACGGGGGACA	2276	False	NA	-127	True	TTTAAA	-44	NA	71309200	71281113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71309102
ENSMUST00000233364.2	chr17	+	1558	2	FSM	ENSMUSG00000023906.4	ENSMUST00000233364.2	1078	2	0	-480	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGATGTCTCT	NA	False	NA	5	True	AATAAA	-19	NA	23898632	23901416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_23898796_23900021
ENSMUST00000233413.2	chr17	-	1034	4	FSM	ENSMUSG00000045378.6	ENSMUST00000233413.2	1034	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.48528137423857	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTCCTCTGTGTGTCTCT	6213	False	NA	-1	True	AATAAA	-15	NA	29161238	29152960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29153781_29159849_29159868_29160215_29160344_29161170
ENSMUST00000233427.2	chr17	+	729	6	FSM	ENSMUSG00000037805.16	ENSMUST00000233427.2	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	3247.70076207769	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547541	28550006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28547593_28547787_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUST00000233430.2	chr17	+	945	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	155.5913450892	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCACACCGCCTGTGCT	NA	False	NA	-4	True	AATAAA	-21	NA	46991911	46994028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ENSMUST00000233438.2	chr17	-	3000	10	FSM	ENSMUSG00000023953.10	ENSMUST00000233438.2	2130	10	0	-870	0	0	multi-exon	FALSE	canonical	2	4	junction_7	6.99382443638054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCTTGCATACTTTT	7146	False	NA	-12	True	AATAAA	-15	NA	46513548	46482280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46509559_46509695_46510317_46510461_46513322
ENSMUST00000233440.2	chr17	-	2862	15	FSM	ENSMUSG00000004865.17	ENSMUST00000233440.2	4804	15	0	1942	0	0	multi-exon	FALSE	canonical	3	554	junction_1	84.536943982848	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841461	28808563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUST00000233465.2	chr17	-	3474	6	FSM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_5	14.9853261559434	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533818	22504851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532302_22533727
ENSMUST00000233467.2	chr17	-	593	2	FSM	ENSMUSG00000060475.14	ENSMUST00000233467.2	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCAGCCGCAGGTGGCC	NA	False	NA	NA	False	NA	NA	NA	13213052	13211509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13212000_13212949
ENSMUST00000233476.2	chr17	-	3157	16	FSM	ENSMUSG00000061665.8	ENSMUST00000233476.2	3157	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	79.731103647754	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAGAGCTGAAGTAGA	NA	False	NA	NA	False	ATTAAA	-26	NA	43187315	43105768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43187203
ENSMUST00000233480.2	chr17	-	2698	19	FSM	ENSMUSG00000007670.11	ENSMUST00000233480.2	2698	19	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	161.772473966783	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACAGTCACTATTGC	NA	False	NA	NA	False	AATAAA	-13	NA	57338522	57328403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57328849_57329809_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ENSMUST00000233482.2	chr17	+	1659	2	FSM	ENSMUSG00000023915.6	ENSMUST00000233482.2	1659	2	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAGAAAAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	43327458	43349619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_43327984_43348485
ENSMUST00000233484.2	chr17	-	2920	16	FSM	ENSMUSG00000024081.10	ENSMUST00000233484.2	2920	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	165.681810173061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTAGTTTTTGCTAGTCA	NA	False	NA	-6	True	AATAAA	-16	NA	79244470	79227273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242289_79243497_79244303
ENSMUST00000233491.2	chr17	+	787	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233491.2	673	4	121	-235	0	0	multi-exon	FALSE	canonical	3	42	junction_1	413.462076723959	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCTGTGCTCCTGAATCC	NA	False	NA	5	True	AATAAA	-30	NA	46992049	46994037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_46992060_46992542_46992824_46992934_46993038_46993644
ENSMUST00000233506.2	chr1	-	4145	6	FSM	ENSMUSG00000117310.3	ENSMUST00000233506.2	4145	6	0	0	0	0	multi-exon	FALSE	canonical	3	1976	junction_5	190.472465201666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTTCTGCATTTGA	NA	False	NA	0	True	ATTAAA	-19	NA	30988851	30979382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ENSMUST00000233508.2	chr17	-	3493	4	FSM	ENSMUSG00000056692.14	ENSMUST00000233508.2	1348	4	-114	-2031	0	0	multi-exon	FALSE	canonical	2	6	junction_1	17.3781471969828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCCTTTATCCTGTGTG	NA	False	NA	-12	True	ATTAAA	-23	NA	28039540	27970219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27972970_28005044_28005243_28012882_28013038_28039150
ENSMUST00000233514.3	chr17	-	3163	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGTTTGTTTATTTG	NA	False	NA	NA	False	ATTAAA	-35	NA	74601858	74506030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ENSMUST00000233514.3-0	chr17	-	1675	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	-178	1666	-178	0	multi-exon	FALSE	canonical	3	239	junction_3	25.6502923959942	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	74602036	74507696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ENSMUST00000233519.2	chr17	-	414	4	FSM	ENSMUSG00000055839.7	ENSMUST00000233519.2	414	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_3	5439.43761390418	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048088	24043782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24043954_24046441_24046548_24047817_24047923_24048056
ENSMUST00000233525.2	chr17	+	5717	24	FSM	ENSMUSG00000024219.17	ENSMUST00000233525.2	5717	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_22	7.82125454670221	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAAACCGGCCATAGCTC	4266	False	NA	0	True	AATAAA	-9	NA	28128306	28281737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ENSMUST00000233549.2	chr17	+	2749	10	FSM	ENSMUSG00000007603.10	ENSMUST00000233549.2	2749	10	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	26.7830792354676	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTCTCCTTGTGA	9250	False	NA	12	True	NA	NA	NA	57071783	57077093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ENSMUST00000233552.2	chr17	-	1454	10	FSM	ENSMUSG00000024056.11	ENSMUST00000233552.2	1454	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	122.303003607262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTCCCCTCCCATTT	NA	False	NA	-14	True	AATAAA	-16	NA	71820103	71803097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71819928
ENSMUST00000233566.2	chr16	+	2415	4	FSM	ENSMUSG00000023147.18	ENSMUST00000233566.2	2415	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	163.242832069963	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTACTGTGGAAAGCG	NA	False	NA	24	True	AATAAA	-18	NA	95946612	95959046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_95946779_95953012_95953179_95955280_95955396_95957078
ENSMUST00000233568.2	chr17	-	2096	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	0	309	0	0	multi-exon	FALSE	canonical	3	119	junction_12	26.3293443708726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGGGGAGGACCACCTG	NA	False	NA	-31	True	AATAAA	-18	NA	57554672	57541943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUST00000233581.2	chr17	-	734	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	1923	junction_4	306.562391692132	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTTGTATATGACAAGT	NA	False	NA	-10	True	AATAAA	-24	NA	74623458	74606468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
ENSMUST00000233611.2	chr17	+	1746	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	61.0152622072726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATGGATGCCTCTGTGA	9891	False	NA	NA	False	NA	NA	NA	74646031	74695307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUST00000233611.2-0	chr17	+	4718	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	-169	-2803	-119	0	multi-exon	FALSE	canonical	3	21	junction_3	61.0152622072726	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9722	False	NA	33	True	AATAAA	-24	NA	74645862	74698110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUST00000233645.2	chr17	-	8547	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAAAATGTTCACAAGT	NA	False	NA	-19	True	ATTAAA	-21	NA	10538309	10421529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUST00000233645.2-0	chr17	-	4597	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	0	3950	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	100.591718732463	2049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTATGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	10538309	10425479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUST00000233658.3	chr19	-	4920	24	FSM	ENSMUSG00000024812.12	ENSMUST00000233658.3	4920	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	82.6461699898347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAAATGTGTGTATGA	NA	False	NA	NA	False	ATTAAA	-16	NA	24178014	24071868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24177648
ENSMUST00000233673.2	chr17	+	2578	2	FSM	ENSMUSG00000097119.3	ENSMUST00000233673.2	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAATGAAAGAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	45744790	45749223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_45745154_45747008
ENSMUST00000233688.2	chr17	+	461	1	FSM	ENSMUSG00000117192.2	ENSMUST00000233688.2	461	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCATGCAAGCTGTCCAC	7434	False	NA	NA	False	AAGAAA	-30	NA	79059683	79060144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79059700_79060100
ENSMUST00000233701.2	chr17	+	4223	11	FSM	ENSMUSG00000063952.17	ENSMUST00000233701.2	4223	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	101.565791485126	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTCCAGCAGGCATGC	NA	False	NA	NA	False	NA	NA	NA	29024902	29056347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483
ENSMUST00000233732.2	chr17	-	4362	16	FSM	ENSMUSG00000041168.11	ENSMUST00000233732.2	4362	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	205.931854963939	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1583	False	NA	-12	True	AATAAA	-17	NA	56933875	56921296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933365
ENSMUST00000233737.2	chr17	+	3095	1	FSM	ENSMUSG00000117278.2	ENSMUST00000233737.2	3095	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGGGATAATGAG	NA	False	NA	NA	False	AATAAA	-22	NA	13551009	13554104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_13551000_13554100
ENSMUST00000233755.2	chr17	-	5237	26	FSM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_10	48.1782357501808	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGTCTGTTACTGGCT	NA	False	NA	1	True	AATAAA	-23	NA	12537635	12446507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ENSMUST00000233798.2	chr17	-	906	4	FSM	ENSMUSG00000024048.16	ENSMUST00000233798.2	906	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1388.00920586124	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTAGCGTTATTTGCCA	5918	False	NA	-12	True	ATTAAA	-21	NA	71305558	71301281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71305511
ENSMUST00000233803.2	chr17	-	1889	9	FSM	ENSMUSG00000003200.11	ENSMUST00000233803.2	1375	9	0	-514	0	0	multi-exon	FALSE	canonical	2	6	junction_2	231.47678069301	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343576	56323749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_56324737_56324843_56324901_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUST00000233828.2	chr17	-	5428	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	334.742396810177	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGAAACTTTGTTTGG	NA	False	NA	NA	False	AATAAA	-11	NA	10538290	10429117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUST00000233832.2	chr17	+	493	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	1185.6477835625	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAAAGGCAGGCTTG	NA	False	NA	22	True	AATAAA	-22	NA	57024782	57029141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_57024943_57028034_57028128_57028358_57028442_57028984
ENSMUST00000233867.2	chr17	-	1592	6	FSM	ENSMUSG00000060475.14	ENSMUST00000233867.2	446	6	0	-1146	0	-719	multi-exon	FALSE	canonical	3	14	junction_5	266.82773469038	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTGGGTTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	13213056	13193157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13212949
ENSMUST00000233881.2	chr16	-	3249	11	FSM	ENSMUSG00000040732.21	ENSMUST00000233881.2	3249	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.62788205960997	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTAGTCTCCGTTTGT	NA	False	NA	NA	False	AATAAA	-31	NA	95331224	95160027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95178159_95178232_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95325385_95325474_95331122
ENSMUST00000233886.2	chr17	+	2238	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233886.2	704	3	69	-1603	69	0	multi-exon	FALSE	canonical	3	29	junction_1	156.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTACAGAACTGCTACT	1897	False	NA	8	True	AATAAA	-17	NA	73144599	73157432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_73144815_73153273_73153439_73155574
ENSMUST00000233888.2	chr17	-	570	1	FSM	ENSMUSG00000117300.2	ENSMUST00000233888.2	570	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTCAGGGATGGCGGC	2794	False	NA	NA	False	AAGAAA	-9	NA	65745692	65745122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_65745100_65745700
ENSMUST00000233905.2	chr17	+	3784	22	FSM	ENSMUSG00000038677.15	ENSMUST00000233905.2	3784	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.37236735522407	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAGAAAGAAAGAAAA	NA	False	NA	NA	False	TTTAAA	-9	NA	28361291	28390916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28361585_28371371_28371495_28372532_28372659_28374865_28375001_28375738_28375862_28376046_28376164_28379785_28379903_28381289_28381413_28381927_28382045_28382705_28382832_28383018_28383136_28383271_28383377_28383647_28383765_28384036_28384196_28384400_28384617_28384960_28385123_28385330_28385499_28385999_28386162_28386483_28386682_28387102_28387256_28387355_28387436_28390169
ENSMUST00000233916.2	chr17	+	1473	6	FSM	ENSMUSG00000024084.9	ENSMUST00000233916.2	1473	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	82.0351144327842	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAATTTATTTTCATGT	NA	False	NA	11	True	ATTAAA	-20	NA	79359616	79397650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_79359818_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ENSMUST00000233954.2	chr17	+	2902	7	FSM	ENSMUSG00000023908.9	ENSMUST00000233954.2	2902	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	45.7484061653154	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATAGCTCTTCTTGTC	3071	False	NA	26	True	AATAAA	-40	NA	23945442	23955701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_23945616_23951310_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUST00000233974.2	chr17	-	2313	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_15	23.4960043884534	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCGGAGTCTTCATTG	NA	False	NA	-2	True	AATAAA	-18	NA	46956948	46941549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
ENSMUST00000233975.2	chr17	-	1533	2	FSM	ENSMUSG00000117333.2	ENSMUST00000233975.2	1533	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAGTGAATGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	23026710	22996190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_22997598_23026584
ENSMUST00000233984.2	chr17	+	1411	12	FSM	ENSMUSG00000004864.14	ENSMUST00000233984.2	2937	12	0	1526	0	203	multi-exon	FALSE	canonical	3	65	junction_6	12.7227264607489	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCCCTTTTCTGTTGGT	NA	False	NA	15	True	NA	NA	NA	28988270	28997681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995157_28995275_28995391_28995475_28995548_28996455_28996536_28996696_28996776_28997050_28997228_28997401
ENSMUST00000233988.2	chr17	-	3038	15	FSM	ENSMUSG00000059409.10	ENSMUST00000233988.2	3038	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_14	104.207504919908	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGAGTCGCCTTGGTGT	1000	False	NA	NA	False	AATAAA	-15	NA	47016037	46993916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011076_47015758
ENSMUST00000234044.2	chr18	-	2219	5	FSM	ENSMUSG00000024413.15	ENSMUST00000234044.2	2219	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	5.44862367942584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGGTCTTTTATTGCAG	NA	False	NA	-25	True	AATAAA	-17	NA	12328464	12322748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065
ENSMUST00000234046.2	chr5	-	947	2	FSM	ENSMUSG00000072694.9	ENSMUST00000234046.2	947	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTCTTGTGGGTGAT	9593	False	NA	2	True	NA	NA	NA	114961529	114959995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_114960787_114961373
ENSMUST00000234067.2	chr17	-	2017	5	FSM	ENSMUSG00000056121.17	ENSMUST00000234067.2	2017	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	128.324783264964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATGGTAGTAGGATTAA	NA	False	NA	NA	False	AATAAA	-21	NA	78725120	78706911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78724887
ENSMUST00000234069.2	chr18	+	339	3	FSM	ENSMUSG00000042705.10	ENSMUST00000234069.2	339	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	740	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCAATGCAGACTGCT	NA	False	NA	NA	False	NA	NA	NA	47091920	47096315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47091996_47093482_47093574_47096142
ENSMUST00000234075.2	chr18	+	592	1	FSM	ENSMUSG00000117405.2	ENSMUST00000234075.2	592	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCCCTCGTGTCTGTA	NA	False	NA	NA	False	AAGAAA	-3	NA	24078015	24078607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24078000_24078600
ENSMUST00000234085.2	chr18	+	1294	5	FSM	ENSMUSG00000042705.10	ENSMUST00000234085.2	494	5	-13	-787	0	0	multi-exon	FALSE	canonical	3	159	junction_2	523.690271057235	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091931	47221062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47091996_47093482_47093574_47123545_47123657_47219318_47219379_47220094
ENSMUST00000234095.2	chr17	-	2403	8	FSM	ENSMUSG00000024097.12	ENSMUST00000234095.2	2403	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	780.885394920407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAAGTTTGTTCAAT	NA	False	NA	-56	True	NA	NA	NA	80514286	80507553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80513995
ENSMUST00000234098.2	chr17	-	1440	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234098.2	1440	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	254.994553318737	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	False	NA	-6	True	AGTAAA	-24	NA	25105321	25101585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25102289_25102779_25102864_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUST00000234107.2	chr18	+	2422	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	133.739008703443	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	21134397	21160592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUST00000234118.2	chr18	-	2494	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234118.2	2494	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	102.439937663015	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12987516	12888384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12987471
ENSMUST00000234129.2	chr17	-	1185	13	FSM	ENSMUSG00000024012.19	ENSMUST00000234129.2	1185	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	348.277298124481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566526	29551049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29551254_29551634_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ENSMUST00000234133.2	chr17	-	4088	33	FSM	ENSMUSG00000024242.16	ENSMUST00000234133.2	4088	33	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_19	35.3232837516559	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035453	80887945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ENSMUST00000234139.2	chr17	-	1101	3	FSM	ENSMUSG00000024007.16	ENSMUST00000234139.2	1101	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	678	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGTGGTCTAGTATTG	NA	False	NA	-26	True	AATAAA	-21	NA	29471667	29469803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29470700_29471223_29471293_29471531
ENSMUST00000234146.2	chr18	+	919	3	FSM	ENSMUSG00000024258.5	ENSMUST00000234146.2	706	3	-1	-212	0	0	multi-exon	FALSE	canonical	3	63	junction_2	315.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	False	NA	21	True	AATAAA	-20	NA	31922211	31929754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_31922298_31924892_31925074_31929102
ENSMUST00000234148.2	chr18	+	3078	13	FSM	ENSMUSG00000024404.8	ENSMUST00000234148.2	3078	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	154.442725809782	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTCATTGTGTGGTTAA	5519	False	NA	10	True	ATTAAA	-22	NA	12261811	12289758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276252_12281847_12281903_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUST00000234175.2	chr17	-	2749	12	FSM	ENSMUSG00000024187.16	ENSMUST00000234175.2	2749	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	62.3582027847616	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	1900	False	NA	-17	True	AATAAA	-31	NA	26463216	26431683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462963
ENSMUST00000234186.2	chr18	+	2110	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234186.2	2110	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	58.8005102018681	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-12	True	NA	18	True	AATAAA	-20	NA	4375591	4396785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUST00000234191.2	chr18	+	3174	8	FSM	ENSMUSG00000041915.10	ENSMUST00000234191.2	3174	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	39.8819687148394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCTAAACTTCACCCCT	8845	False	NA	NA	False	TTTAAA	-26	NA	31894856	31915796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913094_31913223_31913696
ENSMUST00000234194.2	chr18	-	2489	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234194.2	2489	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	102.439937663015	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12988321	12888384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12988281
ENSMUST00000234197.2	chr17	-	1162	4	FSM	ENSMUSG00000040888.11	ENSMUST00000234197.2	1162	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	265.654328446239	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTTTCTGTGTGCTTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24915067	24912160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24912611_24913164_24913417_24914227_24914425_24914804
ENSMUST00000234207.2	chr18	+	439	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	847.378047600689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAGTGTAGGGACAGA	-11	True	NA	2	True	NA	NA	NA	10617795	10627955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
ENSMUST00000234216.2	chr17	+	2428	1	FSM	ENSMUSG00000043445.8	ENSMUST00000234216.2	2428	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGAAGCTGTTCCCGG	NA	False	NA	NA	False	AATAAA	-13	NA	24689408	24691836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24689400_24691800
ENSMUST00000234240.2	chr17	-	1323	1	FSM	ENSMUSG00000117499.2	ENSMUST00000234240.2	1323	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCATTGCTATCATCTT	NA	False	NA	-3	True	AATAAA	-19	NA	95123491	95122168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_95122200_95123500
ENSMUST00000234241.2	chr18	-	3112	5	FSM	ENSMUSG00000050945.9	ENSMUST00000234241.2	3112	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	6.20483682299543	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTATTAGTCTCTGGT	-6	True	NA	NA	False	TATAAA	-18	NA	5334807	5210123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334717
ENSMUST00000234241.2-0	chr18	-	2861	5	FSM	ENSMUSG00000050945.9	ENSMUST00000234241.2	3112	5	0	251	0	-251	multi-exon	FALSE	canonical	3	8	junction_4	6.20483682299543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGTAGAGAAAATTGT	-6	True	NA	NA	False	AATAAA	-24	NA	5334807	5210374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334717
ENSMUST00000234247.2	chr17	+	2589	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	40.4101421902563	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGGCCTCTCATTCTCC	597	False	NA	12	True	AATAAA	-17	NA	34138610	34148265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ENSMUST00000234262.2	chr17	-	2774	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234262.2	2774	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	57.1286924408392	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGATGTCTTTCTG	1974	False	NA	2	True	NA	NA	NA	26463142	26431664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ENSMUST00000234266.2	chr18	+	3466	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGAGTCACCTGAGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	24737017	24772564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUST00000234266.2-0	chr18	+	2767	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	2	697	0	0	multi-exon	FALSE	canonical	3	667	junction_5	86.0279973411599	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737019	24771867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUST00000234280.2	chr18	+	1409	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234280.2	600	6	-14	-795	0	0	multi-exon	FALSE	canonical	3	187	junction_3	477.712298355401	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091927	47221062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47123545_47123657_47219318_47219379_47220094
ENSMUST00000234293.2	chr17	-	1191	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234293.2	1191	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	321.432419024591	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTCAAGGTGTCTG	NA	False	NA	-12	True	AGTAAA	-18	NA	25105303	25101591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104692_25104812_25105264
ENSMUST00000234294.2	chr17	+	1578	5	FSM	ENSMUSG00000024014.9	ENSMUST00000234294.2	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	1677	junction_3	119.340636415263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACAAAAAACAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29710278	29714419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ENSMUST00000234295.2	chr17	+	3079	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	17.6635217326557	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTCGTCATGGTATC	NA	False	NA	NA	False	NA	NA	NA	95172345	95185749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
ENSMUST00000234297.2	chr17	-	1130	2	FSM	ENSMUSG00000059208.16	ENSMUST00000234297.2	1130	2	0	0	0	0	multi-exon	FALSE	canonical	3	1945	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTCTGCCCCTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	33868661	33866801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33867839_33868568
ENSMUST00000234304.2	chr17	+	1137	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	41.5508390074403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTAGCTCTTGTGTTC	4840	False	NA	11	True	TATAAA	-24	NA	24645614	24658294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUST00000234308.2	chr17	+	2084	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234308.2	2084	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	906	False	NA	10	True	AATAAA	-22	NA	24851653	24857810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24852833_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ENSMUST00000234315.2	chr17	-	1050	2	FSM	ENSMUSG00000024007.16	ENSMUST00000234315.2	1050	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGTGGTCTAGTATTGT	NA	False	NA	-25	True	AATAAA	-22	NA	29470969	29469802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29470700_29470816
ENSMUST00000234316.2	chr18	+	1406	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	19.3349424617711	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGCGTTTGAAGTGT	1219	False	NA	NA	False	AATATA	-11	NA	21094528	21116781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ENSMUST00000234332.2	chr17	+	1840	6	FSM	ENSMUSG00000061130.14	ENSMUST00000234332.2	1290	6	-377	-173	0	0	multi-exon	FALSE	canonical	3	54	junction_5	598.858046618729	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTGTGGTTTTATTCCA	NA	False	NA	11	True	AATAAA	-19	NA	85265426	85331419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85331123
ENSMUST00000234335.2	chr17	-	1574	9	FSM	ENSMUSG00000024142.16	ENSMUST00000234335.2	1574	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	26.1951808545007	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTTGCTCGGGAAGC	9627	False	NA	NA	False	AATAAA	-14	NA	24698012	24694275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697458_24697985
ENSMUST00000234342.2	chr17	+	2106	1	FSM	ENSMUSG00000034681.18	ENSMUST00000234342.2	2106	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GCAAAAAAAAAAAAAAAAAT	803	False	NA	NA	False	NA	NA	NA	24633538	24635644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24633500_24635600
ENSMUST00000234344.2	chr18	+	2416	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_4	31.1088411870323	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCACTGTTAGAATCT	5733	False	NA	7	True	AATAAA	-18	NA	31937228	31968475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ENSMUST00000234362.2	chr17	+	1780	9	FSM	ENSMUSG00000090083.12	ENSMUST00000234362.2	1780	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	87.2496418330757	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCTCAGCTGGGCTTC	NA	False	NA	16	True	AATAAA	-15	NA	29833941	29860623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29834053_29840482_29840612_29845479_29845817_29845920_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ENSMUST00000234403.2	chr18	-	2950	5	FSM	ENSMUSG00000040446.5	ENSMUST00000234403.2	2950	5	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	46.5886252211846	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTCTCATGTTTTTGA	NA	False	NA	-1	True	AATAAA	-18	NA	24663115	24638483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_24640067_24640161_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUST00000234406.2	chr17	-	842	5	FSM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	3004.56365384393	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTGGACTGTGGACAGT	NA	False	NA	-135	True	NA	NA	NA	87754284	87741092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754220
ENSMUST00000234406.2-0	chr17	-	1095	5	FSM	ENSMUSG00000036438.15	ENSMUST00000234406.2	842	5	0	-253	0	0	multi-exon	FALSE	canonical	3	65	junction_4	3004.56365384393	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCTCTGAATCTGAGT	NA	False	NA	-5	True	AATAAA	-21	NA	87754284	87740839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87754220
ENSMUST00000234410.2	chr18	-	5032	7	FSM	ENSMUSG00000024420.10	ENSMUST00000234410.2	5032	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.18416219575713	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGAGTGTATTTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	14104777	13821272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14104420
ENSMUST00000234416.2	chr17	-	1652	13	FSM	ENSMUSG00000024012.19	ENSMUST00000234416.2	1652	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	417.184478245403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566526	29551049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29560038_29560176_29561796_29561882_29566440
ENSMUST00000234422.2	chr18	+	2626	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTGATAACAGTATTTC	-8	True	NA	15	True	AATAAA	-16	NA	4375595	4397328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUST00000234422.2-0	chr18	+	2075	9	FSM	ENSMUSG00000024234.8	ENSMUST00000234422.2	2626	9	8	543	0	0	multi-exon	FALSE	canonical	3	50	junction_2	58.5340445809103	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	0	True	NA	18	True	AATAAA	-20	NA	4375603	4396785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_4375779_4379568_4379742_4380672_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUST00000234468.2	chr17	+	868	1	FSM	ENSMUSG00000036918.17	ENSMUST00000234468.2	868	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAGACCGATGCGTTT	NA	False	NA	NA	False	AATAAA	-26	NA	87590375	87591243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87590400_87591200
ENSMUST00000234489.2	chr17	-	1423	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234489.2	1423	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	262.106636483872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	False	NA	-13	True	AGTAAA	-17	NA	25105294	25101592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103561_25104392_25104592_25104692_25104812_25105252
ENSMUST00000234496.2	chr18	+	1886	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	7.81024967590665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAACGAGGCGTGTCTT	NA	False	NA	12	True	AAAAAG	-19	NA	32510297	32568786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ENSMUST00000234503.2	chr17	-	1991	9	FSM	ENSMUSG00000024097.12	ENSMUST00000234503.2	1991	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	890.532565378718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGTTTGAGGA	NA	False	NA	NA	False	NA	NA	NA	80514736	80508258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ENSMUST00000234503.2-0	chr17	-	1508	9	FSM	ENSMUSG00000024097.12	ENSMUST00000234503.2	1991	9	3	480	0	0	multi-exon	FALSE	canonical	3	75	junction_6	890.532565378718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
ENSMUST00000234507.2	chr17	-	1653	12	FSM	ENSMUSG00000024012.19	ENSMUST00000234507.2	1653	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	368.706696574898	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566267	29551049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566094
ENSMUST00000234520.2	chr17	-	1177	4	FSM	ENSMUSG00000040888.11	ENSMUST00000234520.2	1177	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	273.584843634779	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	False	NA	-10	True	AATAAA	-14	NA	24915086	24912163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24912587_24913141_24913417_24914227_24914425_24914804
ENSMUST00000234524.2	chr18	-	2603	9	FSM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	300.413048984228	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATAAATTATTTGTGA	NA	False	NA	-45	True	TTTAAA	-19	NA	14815823	14758711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUST00000234536.2	chr18	+	2271	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_6	95.8227530391399	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	21134964	21160592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUST00000234543.2	chr17	-	3127	7	FSM	ENSMUSG00000024142.16	ENSMUST00000234543.2	3127	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	29.5658398982489	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTGTGAGGCCGATTGC	9605	False	NA	-4	True	AATAAA	-13	NA	24698034	24692528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697985
ENSMUST00000234545.2	chr18	+	1769	5	FSM	ENSMUSG00000024317.16	ENSMUST00000234545.2	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	174.891930917353	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATCTCTGAAGTA	NA	False	NA	NA	False	TTTAAA	-13	NA	21135151	21160442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21159142
ENSMUST00000234547.2	chr17	-	2556	13	FSM	ENSMUSG00000024251.11	ENSMUST00000234547.2	2556	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	26.3849704693158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTCTTTTGTTTGGTTTT	6730	False	NA	-117	True	NA	NA	NA	84676208	84498964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84676074
ENSMUST00000234554.2	chr17	-	2828	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234554.2	2828	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	57.1286924408392	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGGATGTCTTTCTG	1920	False	NA	2	True	NA	NA	NA	26463196	26431664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ENSMUST00000234555.2	chr17	-	1242	3	FSM	ENSMUSG00000016946.7	ENSMUST00000234555.2	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_1	20.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTGAGTTATTTTGTG	NA	False	NA	NA	False	NA	NA	NA	24279291	24275735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24276811_24278195_24278288_24279216
ENSMUST00000234557.2	chr17	-	2035	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234557.2	2035	6	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	24.9671784549236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGCCTGTGTGTTTT	5179	False	NA	-6	True	ATTAAA	-17	NA	24869263	24858259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUST00000234557.2-0	chr17	-	1551	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234557.2	2035	6	0	484	0	0	multi-exon	FALSE	canonical	3	15	junction_1	24.9671784549236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCTTACCCACCCTGT	5179	False	NA	0	True	AATAAA	-21	NA	24869263	24858743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUST00000234559.2	chr18	+	1023	4	FSM	ENSMUSG00000024273.9	ENSMUST00000234559.2	1023	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	19.3620476419435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACCAACGGAGCAGAAGG	341	False	NA	-94	True	NA	NA	NA	24603907	24610714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24604142_24606006_24606207_24608581_24608782_24610325
ENSMUST00000234568.2	chr17	+	2651	20	FSM	ENSMUSG00000024078.8	ENSMUST00000234568.2	2651	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_19	29.4919116570221	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCTTATTTTGTGATGTT	NA	False	NA	6	True	AATAAA	-17	NA	75024906	75170561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170331
ENSMUST00000234579.2	chr17	-	1445	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234579.2	1445	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	253.310580118557	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGTGTCTGTCTTGTT	NA	False	NA	-5	True	AGTAAA	-25	NA	25105313	25101584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104838_25105252
ENSMUST00000234584.2	chr17	+	5412	23	FSM	ENSMUSG00000032624.17	ENSMUST00000234584.2	2934	23	-284	-2194	0	0	multi-exon	FALSE	canonical	3	198	junction_4	84.4550347377939	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658359	83787790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734781_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUST00000234593.2	chr17	-	2224	2	FSM	ENSMUSG00000055660.10	ENSMUST00000234593.2	2224	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTTGGCTATCGCATG	NA	False	NA	NA	False	TATAAA	-24	NA	95057369	95054126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_95055846_95056864
ENSMUST00000234623.2	chr17	+	1745	9	FSM	ENSMUSG00000045394.10	ENSMUST00000234623.2	1745	9	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_4	21.0535032714273	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACGTGGGTAAGTCTTGT	NA	False	NA	NA	False	NA	NA	NA	87944109	87958557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87944323_87947323_87947432_87947715_87947957_87948861_87948928_87949529_87949594_87950969_87951072_87953564_87953769_87957041_87957087_87957855
ENSMUST00000234630.2	chr17	+	1486	2	FSM	ENSMUSG00000034681.18	ENSMUST00000234630.2	1486	2	0	0	0	0	multi-exon	FALSE	canonical	3	1714	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGCTGGTTTTACTGT	2070	False	NA	NA	False	AATAAA	-21	NA	24642844	24644872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24643518_24644059
ENSMUST00000234633.2	chr18	+	515	1	FSM	ENSMUSG00000117621.2	ENSMUST00000234633.2	515	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1031	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAAAATGATGTAAATG	NA	False	NA	NA	False	NA	NA	NA	47245205	47245720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47245200_47245700
ENSMUST00000234635.2	chr17	+	893	6	FSM	ENSMUSG00000041429.4	ENSMUST00000234635.2	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	84.8042451767599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGTGGTAAACTTTGGG	945	False	NA	-47	True	NA	NA	NA	24851692	24857753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24851738_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ENSMUST00000234687.2	chr17	-	2833	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_12	40.5798253103956	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCGTGAGCCTGCAGT	1928	False	NA	-17	True	AATAAA	-31	NA	26463188	26431683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ENSMUST00000234696.2	chr17	-	987	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234696.2	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	923.958693160396	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514732	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80509032_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUST00000234701.2	chr18	+	1454	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234701.2	528	6	-19	-907	0	0	multi-exon	FALSE	canonical	3	144	junction_2	502.986441169143	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091927	47221062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47091996_47093482_47093574_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ENSMUST00000234711.2	chr17	+	1196	8	FSM	ENSMUSG00000052712.18	ENSMUST00000234711.2	13859	8	123	12540	0	0	multi-exon	FALSE	canonical	3	31	junction_1	113.402479906656	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	471	False	NA	15	True	AATAAA	-16	NA	29487921	29520499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29487977_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000234728.2	chr18	+	439	2	FSM	ENSMUSG00000002477.6	ENSMUST00000234728.2	439	2	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGGTGCTGGGAATT	-1	True	NA	NA	False	NA	NA	NA	10617864	10624007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_10617927_10623630
ENSMUST00000234789.2	chr18	+	5134	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_13	8.14912039825809	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTTTTGTTGTCAGT	NA	False	NA	NA	False	AATACA	-11	NA	14916301	15033416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ENSMUST00000234803.2	chr17	+	3443	2	FSM	ENSMUSG00000037104.10	ENSMUST00000234803.2	978	2	-79	-2386	-67	-1211	multi-exon	FALSE	canonical	3	48	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCGTTTTATACATT	NA	False	NA	7	True	AATAAA	-21	NA	87415039	87444056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_87415476_87441049
ENSMUST00000234805.2	chr18	+	2047	2	FSM	ENSMUSG00000024287.9	ENSMUST00000234805.2	2047	2	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAATGAAAAAAAGAAGA	13	True	NA	NA	False	AATAAA	-1	NA	9958179	9961077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_9958247_9959097
ENSMUST00000234808.2	chr17	-	885	1	FSM	ENSMUSG00000117438.2	ENSMUST00000234808.2	885	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTGTGCAGACGCC	NA	False	NA	NA	False	NA	NA	NA	82718248	82717363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_82717400_82718200
ENSMUST00000234834.2	chr18	+	4956	25	FSM	ENSMUSG00000034295.11	ENSMUST00000234834.2	4956	25	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	8.53414302799187	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	24842501	25266558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ENSMUST00000234847.2	chr18	+	2527	8	FSM	ENSMUSG00000024271.9	ENSMUST00000234847.2	2527	8	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_5	72.5089719993889	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTGAGAGGCAGTACG	NA	False	NA	NA	False	NA	NA	NA	24737041	24750807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945
ENSMUST00000234871.2	chr18	-	2818	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_13	91.3749671156418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12996497	12888384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ENSMUST00000234871.2-0	chr18	-	1894	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	60	864	0	0	multi-exon	FALSE	canonical	3	45	junction_13	91.3749671156418	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGTTTGCTAATCTAA	NA	False	NA	-11	True	ATTAAA	-13	NA	12996437	12889248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ENSMUST00000234880.2	chr17	-	1117	3	FSM	ENSMUSG00000024007.16	ENSMUST00000234880.2	1117	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	678	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGTCTAGTATTGTT	NA	False	NA	-24	True	AATAAA	-23	NA	29471677	29469801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29470700_29471223_29471293_29471527
ENSMUST00000234888.2	chr17	+	583	2	FSM	ENSMUSG00000041429.4	ENSMUST00000234888.2	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTGGCCCGTTGGCT	6402	False	NA	10	True	AATAAA	-22	NA	24857149	24857810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24857504_24857581
ENSMUST00000234889.2	chr17	-	1898	7	FSM	ENSMUSG00000024097.12	ENSMUST00000234889.2	1898	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	729.529623951092	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80512868_80513276_80513458_80514603
ENSMUST00000234890.2	chr18	+	891	4	FSM	ENSMUSG00000024287.9	ENSMUST00000234890.2	891	4	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_2	35.5621521658443	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTAGAAAATTATATGAGA	10	True	NA	NA	False	AATAGA	-36	NA	9958176	9961171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485
ENSMUST00000234901.2	chr18	+	1875	14	FSM	ENSMUSG00000024287.9	ENSMUST00000234901.2	1875	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	213.882564692146	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	5614	False	NA	14	True	AATAAA	-14	NA	9963803	9993725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUST00000234910.2	chr18	+	2257	5	FSM	ENSMUSG00000073568.3	ENSMUST00000234910.2	2257	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	19.1441897190766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCAGGGTTTCTTTTTTC	NA	False	NA	26	True	AATAAA	-22	NA	47054881	47067299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47054960_47059048_47059157_47059378_47059483_47061585_47061726_47065472
ENSMUST00000234915.2	chr17	-	649	2	FSM	ENSMUSG00000039183.7	ENSMUST00000234915.2	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCTTCAGGGTATATATA	NA	False	NA	NA	False	NA	NA	NA	25105281	25104217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25104838_25105252
ENSMUST00000234928.2	chr17	-	1471	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234928.2	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_4	61.1391854705311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAAGGTGTCTGTCTTGT	NA	False	NA	-6	True	AGTAAA	-24	NA	25104925	25101585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692
ENSMUST00000234941.2	chr17	-	3223	9	FSM	ENSMUSG00000024142.16	ENSMUST00000234941.2	3223	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	26.8234971620033	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGGCCGATTGCTTTC	9610	False	NA	0	True	AATAAA	-17	NA	24698029	24692524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697339_24697985
ENSMUST00000234956.2	chr17	+	3352	12	FSM	ENSMUSG00000041130.11	ENSMUST00000234956.2	3352	12	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_10	128.150802179204	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1176	False	NA	12	True	AATAAA	-20	NA	24888660	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ENSMUST00000234961.2	chr18	+	792	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_5	518.443593846042	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACTTTATAAATATTT	NA	False	NA	-11	True	TTTAAA	-1	NA	47091927	47168874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47168619
ENSMUST00000234965.2	chr18	+	3326	10	FSM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	53	4645	0	0	multi-exon	FALSE	canonical	3	13	junction_7	3.52066211505664	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTGTATGTGTCTAT	-3	True	NA	NA	False	AAGAAA	-2	NA	9707647	9877999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
ENSMUST00000234966.2-1	chr18	+	2106	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	466	1813	448	0	multi-exon	FALSE	canonical	3	26	junction_4	8.52563138615225	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTGTGACCTTGCAGGA	NA	False	NA	2	True	AATAAA	-16	NA	12776866	12870107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ENSMUST00000234968.2	chr17	-	1502	7	FSM	ENSMUSG00000039183.7	ENSMUST00000234968.2	1502	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	246.820953999723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	-11	True	AGTAAA	-19	NA	25105307	25101590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25102384_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUST00000234977.2	chr17	+	1769	8	FSM	ENSMUSG00000034681.18	ENSMUST00000234977.2	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	570.995335768505	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGTTTTACTGTCTG	889	False	NA	NA	False	AATAAA	-24	NA	24633624	24644875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24633709_24634014_24634137_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUST00000234988.2	chr17	+	3285	9	FSM	ENSMUSG00000041130.11	ENSMUST00000234988.2	3285	9	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	127.665028002973	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATTGTGCTACTTGAA	585	False	NA	15	True	ATTAAA	-8	NA	24896115	24900866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ENSMUST00000234990.2	chr17	-	6640	9	FSM	ENSMUSG00000055660.10	ENSMUST00000234990.2	6640	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	34.5269369478383	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGAGTTTTTAATTTA	NA	False	NA	68	True	AATAAA	-22	NA	95057320	95030017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95057164
ENSMUST00000234997.2	chr18	-	2196	7	FSM	ENSMUSG00000037013.18	ENSMUST00000234997.2	2196	7	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_1	71.6792624590032	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTAAAGTACATCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	14815821	14772026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUST00000235009.2	chr17	-	327	3	FSM	ENSMUSG00000117358.2	ENSMUST00000235009.2	327	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCATTGGTCTCAGTGTT	NA	False	NA	-5	True	AATAAA	-14	NA	74834639	74826659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_74826911_74830509_74830574_74834627
ENSMUST00000235010.2	chr18	-	2365	1	FSM	ENSMUSG00000117634.2	ENSMUST00000235010.2	2365	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGAAGCTATGATTA	NA	False	NA	NA	False	AAAAAG	-2	NA	11790841	11788476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_11788500_11790800
ENSMUST00000235011.2	chr18	-	2086	4	FSM	ENSMUSG00000037013.18	ENSMUST00000235011.2	2086	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	426.45072660534	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14784180	14758685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_14760369_14766599_14766734_14774012_14774181_14784079
ENSMUST00000235017.2	chr18	+	4030	21	FSM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_13	32.249767441022	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	6805	False	NA	8	True	AATAAA	-20	NA	31767423	31856114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUST00000235027.2	chr18	-	2531	14	FSM	ENSMUSG00000044252.19	ENSMUST00000235027.2	2531	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	102.439937663015	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	12994262	12888384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12994180
ENSMUST00000235036.2	chr17	-	1921	7	FSM	ENSMUSG00000024097.12	ENSMUST00000235036.2	1921	7	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	429.146601472685	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTGATTTTTGTGTT	NA	False	NA	-9	True	AATAAA	-14	NA	80514734	80508740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
ENSMUST00000235050.2	chr17	+	773	6	FSM	ENSMUSG00000052712.18	ENSMUST00000235050.2	773	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	140.841187157735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTGGTTGCTTAGTTAC	476	False	NA	19	True	AATAAA	-20	NA	29487926	29520503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29487977_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000235059.2	chr17	-	317	2	FSM	ENSMUSG00000072082.8	ENSMUST00000235059.2	317	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGTAAGTTACCATATG	8737	False	NA	NA	False	NA	NA	NA	24470321	24468229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_24468380_24470154
ENSMUST00000235063.2	chr17	-	3621	5	FSM	ENSMUSG00000003929.12	ENSMUST00000235063.2	812	5	0	-2809	0	1872	multi-exon	FALSE	canonical	2	6	junction_3	15.2540978100968	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTACTTGTTTTAAATGA	NA	False	NA	NA	False	ATTAAA	-18	NA	33577842	33551474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33557074_33557226_33577707
ENSMUST00000235069.2	chr17	-	1040	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_3	412.241508371597	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	False	NA	-14	True	AATAAA	-9	NA	80514732	80508745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUST00000235088.2	chr17	-	1660	12	FSM	ENSMUSG00000024012.19	ENSMUST00000235088.2	1660	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	352.712675424287	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTGCAAGCCTCTTAT	NA	False	NA	-9	True	AATAAA	-21	NA	29566325	29551049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566094
ENSMUST00000235091.2	chr17	+	146	1	FSM	ENSMUSG00000117610.2	ENSMUST00000235091.2	146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGAGCAAGCAGGGAC	2137	False	NA	NA	False	NA	NA	NA	29442269	29442415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29442300_29442400
ENSMUST00000235114.2	chr17	+	1073	8	FSM	ENSMUSG00000052712.18	ENSMUST00000235114.2	1073	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	114.986245850075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCATGGGTTGGTTGCT	468	False	NA	12	True	AATAAA	-13	NA	29487918	29520496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUST00000235142.2	chr19	-	2535	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235142.2	2535	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	178.285040190016	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTCCCCACTTAGT	NA	False	NA	-18	True	AATAAA	-17	NA	32717183	32650221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32714627_32714675_32717041
ENSMUST00000235158.2	chr17	-	2711	1	FSM	ENSMUSG00000117818.2	ENSMUST00000235158.2	2711	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCTGTTCTGTCTGCT	NA	False	NA	-2	True	NA	NA	NA	31771231	31768520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31768500_31771200
ENSMUST00000235166.2	chr19	+	1459	6	FSM	ENSMUSG00000025231.18	ENSMUST00000235166.2	1459	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	25.1029878699728	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGACTTGGTTTACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	46389562	46442482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597
ENSMUST00000235171.2	chr17	-	1955	6	FSM	ENSMUSG00000024026.14	ENSMUST00000235171.2	898	6	-57	-1000	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1306.85751327373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30831633	30811839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30813201_30815347_30815438_30816778_30816867_30819012_30819154_30822993_30823077_30831441
ENSMUST00000235174.2	chr18	+	549	3	FSM	ENSMUSG00000003779.17	ENSMUST00000235174.2	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	79	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACCACTGATGTTATTA	6693	False	NA	NA	False	NA	NA	NA	34758503	34760215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34758695_34759768_34759859_34759947
ENSMUST00000235180.2	chr17	-	1826	9	FSM	ENSMUSG00000024039.16	ENSMUST00000235180.2	1826	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.025581389526	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGTCGTGTCGACCT	8208	False	NA	-21	True	NA	NA	NA	31841856	31831618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400
ENSMUST00000235187.2	chr17	-	3480	4	FSM	ENSMUSG00000062202.15	ENSMUST00000235187.2	3480	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	32.782108941718	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATACAAGTGTTTCATT	NA	False	NA	NA	False	ATTAAA	-18	NA	30511306	30436514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30511043
ENSMUST00000235189.2	chr19	-	2866	19	FSM	ENSMUSG00000024827.11	ENSMUST00000235189.2	2866	19	0	0	0	0	multi-exon	FALSE	canonical	3	1040	junction_5	88.9916073168673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAATAGCTTAT	NA	False	NA	NA	False	NA	NA	NA	30152829	30092220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ENSMUST00000235199.2	chr18	+	3107	15	FSM	ENSMUSG00000037236.17	ENSMUST00000235199.2	3107	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	318.569899099467	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTAGTTTGAGGCTTCAA	NA	False	NA	-59	True	AATGAA	-3	NA	35695497	35723791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695575_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000235205.2	chr17	-	4183	13	FSM	ENSMUSG00000024045.7	ENSMUST00000235205.2	4183	13	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_6	70.5212241495818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGTTCATTAATTAC	NA	False	NA	-1	True	AATAAA	-16	NA	32540212	32522645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUST00000235207.2	chr19	+	6568	3	FSM	ENSMUSG00000049164.8	ENSMUST00000235207.2	6568	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	6.5	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGAGTTTCTTCTTTTTT	1888	False	NA	41	True	ATTAAA	-18	NA	40896602	40906387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_40896648_40899476_40899554_40899941
ENSMUST00000235236.2	chr18	-	4319	15	FSM	ENSMUSG00000024622.9	ENSMUST00000235236.2	4319	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	38.217756851698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTTTGATGAAGCAAG	NA	False	NA	-20	True	AATAAA	-14	NA	61292877	61264363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61292229
ENSMUST00000235243.2	chr19	-	997	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTGAGGCAAACTTTC	NA	False	NA	0	True	NA	NA	NA	10502456	10479707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
ENSMUST00000235243.2-0	chr19	-	1764	4	FSM	ENSMUSG00000024668.9	ENSMUST00000235243.2	997	4	-64	-703	0	0	multi-exon	FALSE	canonical	3	36	junction_2	80.2426874480715	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTGTTTGATCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	10502520	10479004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10480494_10494343_10494454_10494683_10494751_10502422
ENSMUST00000235274.2	chr19	+	3788	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	0	0	0	0	multi-exon	FALSE	canonical	3	708	junction_5	142.157557894544	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1899	False	NA	-56	True	GATAAA	-42	NA	8875470	8894036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUST00000235277.2	chr18	+	1586	2	FSM	ENSMUSG00000117869.2	ENSMUST00000235277.2	1586	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTTATTTTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	35686474	35689017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35686523_35687479
ENSMUST00000235290.2	chr19	+	1060	4	FSM	ENSMUSG00000006435.17	ENSMUST00000235290.2	1060	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	19.5675468285856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTGTTTTTGTT	NA	False	NA	NA	False	TATAAA	-14	NA	47167589	47229835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47229740
ENSMUST00000235293.2	chr19	-	1598	7	FSM	ENSMUSG00000057858.9	ENSMUST00000235293.2	1598	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	113.09533834582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGTTGATTTATTTT	9793	False	NA	NA	False	NA	NA	NA	60215109	60187346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214663
ENSMUST00000235294.2	chr17	-	1198	4	FSM	ENSMUSG00000002274.14	ENSMUST00000235294.2	1198	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	43.8482230730809	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGGGTGTGGCTCGGAT	5921	False	NA	-78	True	NA	NA	NA	26016029	26013874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26014266_26014347_26014408_26015059_26015616_26015838
ENSMUST00000235297.2	chr19	-	1721	11	FSM	ENSMUSG00000041360.9	ENSMUST00000235297.2	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	1425	junction_3	83.6366546437625	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAATGTGGTTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	27404509	27392740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436
ENSMUST00000235307.2	chr18	+	1747	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17695	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	AATAAA	-30	NA	48179713	48181460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_48179700_48181500
ENSMUST00000235315.2	chr17	-	414	1	FSM	ENSMUSG00000117962.2	ENSMUST00000235315.2	414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTATGCCATATTTTCA	9280	False	NA	NA	False	NA	NA	NA	30615007	30614593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30614600_30615000
ENSMUST00000235318.2	chr17	-	1863	8	FSM	ENSMUSG00000036775.14	ENSMUST00000235318.2	1863	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	63.4282496774336	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGCTTGTGTTTCCTGTC	NA	False	NA	-1	True	NA	NA	NA	26307646	26300181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307567
ENSMUST00000235323.2	chr19	-	4520	1	FSM	ENSMUSG00000024764.11	ENSMUST00000235323.2	4520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAACAAAACC	NA	False	NA	NA	False	NA	NA	NA	7218419	7213899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7213900_7218400
ENSMUST00000235327.2	chr17	-	1267	4	FSM	ENSMUSG00000057411.10	ENSMUST00000235327.2	1267	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	24.4449494897321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8392	False	NA	-7	True	AATAAA	-17	NA	26011347	26009479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545
ENSMUST00000235368.2	chr19	-	963	4	FSM	ENSMUSG00000024853.11	ENSMUST00000235368.2	963	4	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_2	51.227162933567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTTTTCTTATTCTAT	NA	False	NA	NA	False	NA	NA	NA	5336882	5334142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5334753_5336216_5336445_5336604_5336686_5336838
ENSMUST00000235383.2	chr18	+	3837	2	FSM	ENSMUSG00000049090.4	ENSMUST00000235383.2	1789	2	-608	-1440	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACACTTCTTTCTGTCCC	4254	False	NA	NA	False	NA	NA	NA	84106187	84115653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_84106906_84112534
ENSMUST00000235387.2	chr17	-	800	4	FSM	ENSMUSG00000002625.11	ENSMUST00000235387.2	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_2	2.94392028877595	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGGGACTAACCACTG	NA	False	NA	NA	False	NA	NA	NA	32569563	32556899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUST00000235400.2	chr18	+	1522	5	FSM	ENSMUSG00000037058.17	ENSMUST00000235400.2	1522	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	1449.29120607282	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGGTGCTTGTGTTAT	4672	False	NA	19	True	AATAAA	-13	NA	35731701	35750236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35731813_35741790_35741873_35743923_35744088_35746375_35746556_35749251
ENSMUST00000235412.2	chr19	-	3771	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGCCTCTCTTAAAG	NA	False	NA	NA	False	AATAAA	-21	NA	32689731	32649037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ENSMUST00000235412.2-0	chr19	-	2128	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	11	1632	0	-448	multi-exon	FALSE	canonical	3	346	junction_2	45.0335951413833	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTGTATCTGTAG	NA	False	NA	NA	False	TATAAA	-26	NA	32689720	32650669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ENSMUST00000235420.2	chr18	+	838	2	FSM	ENSMUSG00000036299.6	ENSMUST00000235420.2	838	2	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTCCAGTAGTTATA	NA	False	NA	NA	False	NA	NA	NA	75141276	75142565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75141898_75142348
ENSMUST00000235429.2	chr17	-	2149	2	FSM	ENSMUSG00000117916.2	ENSMUST00000235429.2	2149	2	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_1	0	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATACTCCGACTTGGGTT	6249	False	NA	-9	True	NA	NA	NA	27461633	27454048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27456112_27461547
ENSMUST00000235453.2	chr19	-	1679	6	FSM	ENSMUSG00000025027.19	ENSMUST00000235453.2	1679	6	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_3	77.5768006558662	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	NA	False	NA	-3	True	AATAAA	-14	NA	52988304	52979613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582
ENSMUST00000235455.2	chr18	+	1905	4	FSM	ENSMUSG00000057561.11	ENSMUST00000235455.2	1905	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	698.014804045492	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTTTTTAATATGTT	NA	False	NA	17	True	AATAAA	-18	NA	46730821	46742245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_46730868_46731707_46731768_46732343_46732468_46740570
ENSMUST00000235480.2	chr18	-	5131	20	FSM	ENSMUSG00000024622.9	ENSMUST00000235480.2	5131	20	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_18	18.508813502905	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTTTGATGAAGCAAG	5877	False	NA	-20	True	AATAAA	-14	NA	61310069	61264363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ENSMUST00000235484.2	chr17	-	1498	5	FSM	ENSMUSG00000039615.10	ENSMUST00000235484.2	1498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1486	junction_1	49.4115371143218	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6787	False	NA	-19	True	AATAAA	-15	NA	26051893	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26049985_26050075_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUST00000235485.2	chr19	-	1140	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235485.2	1790	9	-82	732	0	0	multi-exon	FALSE	canonical	3	133	junction_8	321.93700859019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	-4	True	NA	-6	True	AGTAAA	-15	NA	46327141	46318982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46327007
ENSMUST00000235489.2	chr19	-	1104	2	FSM	ENSMUSG00000025035.10	ENSMUST00000235489.2	1104	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTTGGTCATGGTAT	NA	False	NA	NA	False	NA	NA	NA	46561515	46556344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46557412_46561478
ENSMUST00000235508.2	chr19	-	2045	6	FSM	ENSMUSG00000025220.9	ENSMUST00000235508.2	2045	6	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_1	91.7527111316064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTGGTTGCATTTC	NA	False	NA	0	True	AATAAA	-23	NA	45751673	45740268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623
ENSMUST00000235511.2	chr19	+	2276	1	FSM	ENSMUSG00000118106.2	ENSMUST00000235511.2	2276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTATTAGATATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	32463322	32465598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_32463300_32465600
ENSMUST00000235520.2	chr19	-	1311	3	FSM	ENSMUSG00000007338.11	ENSMUST00000235520.2	1311	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	445.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACGGTGTTCAGAACCT	NA	False	NA	-15	True	ATTAAA	-15	NA	6107788	6103926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6105013_6105105_6105231_6107688
ENSMUST00000235530.2	chr17	+	1135	6	FSM	ENSMUSG00000060586.12	ENSMUST00000235530.2	1669	6	59	475	0	0	multi-exon	FALSE	canonical	3	177	junction_2	11.7064085013295	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34524899	34535173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
ENSMUST00000235551.2	chr18	+	1700	1	FSM	ENSMUSG00000037236.17	ENSMUST00000235551.2	1700	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGAAATACACCCCC	8863	False	NA	NA	False	AATATA	-30	NA	35712079	35713779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35712100_35713800
ENSMUST00000235553.2	chr18	-	671	3	FSM	ENSMUSG00000118216.2	ENSMUST00000235553.2	671	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAAGGCTCTGGGGGATTT	NA	False	NA	NA	False	NA	NA	NA	67083046	67059012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_67059444_67066989_67067096_67082912
ENSMUST00000235575.2	chr19	+	2785	3	FSM	ENSMUSG00000049562.7	ENSMUST00000235575.2	2785	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTCCTGGCCTGTTTTC	7966	False	NA	NA	False	NA	NA	NA	5618052	5621289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5618112_5618467_5618636_5618731
ENSMUST00000235582.2	chr17	-	1567	5	FSM	ENSMUSG00000067203.9	ENSMUST00000235582.2	1567	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	6.10327780786685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGAGAACCTTCCAGAA	3644	False	NA	NA	False	AATAAA	-5	NA	34197801	34193632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34194054_34194470_34194588_34194714_34194990_34196844_34197498_34197700
ENSMUST00000235590.2	chr18	-	2085	6	FSM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	488.205448556241	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTTTGTGAATTTTG	NA	False	NA	-22	True	AATAAA	-2	NA	38472029	38460602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_38462027_38463538_38463714_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ENSMUST00000235595.2	chr18	-	3366	1	FSM	ENSMUSG00000024556.5	ENSMUST00000235595.2	3366	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCGTTTCTGATCTCC	364	False	NA	NA	False	NA	NA	NA	73948516	73945150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_73945200_73948500
ENSMUST00000235599.2	chr19	-	2719	16	FSM	ENSMUSG00000024941.10	ENSMUST00000235599.2	2719	16	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_11	19.8173885486683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCCCAGCTCAGTCCAA	9907	False	NA	-8	True	AATAAA	-16	NA	5821429	5808451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5808725_5808827_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000235600.2	chr17	-	541	3	FSM	ENSMUSG00000061613.14	ENSMUST00000235600.2	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_1	2360.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTTCTTAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	31877712	31871175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31871543_31873952_31874041_31877626
ENSMUST00000235606.2	chr18	-	868	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	31.5722275988812	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	False	NA	-14	True	AATAAA	-23	NA	42084307	42008664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ENSMUST00000235614.2	chr17	-	916	8	FSM	ENSMUSG00000002625.11	ENSMUST00000235614.2	916	8	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_6	163.062527133312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACCAGAAGAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	32554553	32540584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553020_32553561_32553671_32554536
ENSMUST00000235619.2	chr18	-	1524	9	FSM	ENSMUSG00000024357.11	ENSMUST00000235619.2	1524	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	48.2841524208513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTCTCTTGTGTCTG	NA	False	NA	-2	True	ATTAAA	-18	NA	35631947	35399448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481809_35571319_35571434_35631843
ENSMUST00000235620.2	chr19	+	2441	13	FSM	ENSMUSG00000015176.12	ENSMUST00000235620.2	2441	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	313.587042674491	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	4	False	NA	14	True	ATTAAA	-14	NA	46064427	46072900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUST00000235637.2	chr19	-	405	2	FSM	ENSMUSG00000118263.2	ENSMUST00000235637.2	405	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTTCTTTACTCTTTA	9200	False	NA	-3	True	NA	NA	NA	5357444	5355905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5356162_5357295
ENSMUST00000235641.2	chr18	-	2571	2	FSM	ENSMUSG00000047466.11	ENSMUST00000235641.2	2571	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATCCCATTGTAGAGGTG	NA	False	NA	NA	False	AATAAA	-15	NA	77801683	77760072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_77762381_77801420
ENSMUST00000235645.2	chr17	+	1531	5	FSM	ENSMUSG00000041199.4	ENSMUST00000235645.2	1531	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	24.712092181764	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCTTGAGAGTGACCAT	NA	False	NA	14	True	AATAAA	-11	NA	25946705	25950428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25946822_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUST00000235679.2	chr18	+	717	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	39	434	0	0	multi-exon	FALSE	canonical	3	167	junction_1	16.2685791225499	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACATTGGAATTTCATTG	NA	False	NA	NA	False	NA	NA	NA	35686462	35690935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
ENSMUST00000235688.2	chr19	-	613	3	FSM	ENSMUSG00000084957.4	ENSMUST00000235688.2	613	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGGGCTTGTACACTAC	NA	False	NA	NA	False	AATAAA	-17	NA	53932891	53919440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_53919934_53920560_53920637_53932847
ENSMUST00000235701.2	chr19	-	1905	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_9	58.4797768251612	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTATCAGGAGTTCTTA	3629	False	NA	-6	True	AATAAA	-15	NA	5660076	5653044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
ENSMUST00000235702.2	chr17	-	437	4	FSM	ENSMUSG00000024045.7	ENSMUST00000235702.2	437	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	263.006125826419	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGACAACTCAGACTCGCT	NA	False	NA	NA	False	NA	NA	NA	32539632	32536156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32536321_32536819_32536853_32537744_32537784_32539431
ENSMUST00000235730.2	chr19	-	2815	18	FSM	ENSMUSG00000024937.16	ENSMUST00000235730.2	2815	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_10	4.01295480019072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACCAGCGCCTGCCCT	NA	False	NA	NA	False	AATAAA	-11	NA	5776303	5758082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770713_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ENSMUST00000235739.2	chr19	+	808	3	FSM	ENSMUSG00000040385.8	ENSMUST00000235739.2	808	3	0	0	0	0	multi-exon	FALSE	canonical	3	3983	junction_1	58	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAAGAATGTAAGCTT	3416	False	NA	NA	False	NA	NA	NA	4242202	4243628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4242271_4242743_4242876_4243020
ENSMUST00000235746.2	chr18	-	4254	3	FSM	ENSMUSG00000024565.11	ENSMUST00000235746.2	4254	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	11.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCTGAAGGTAAGAACT	NA	False	NA	NA	False	NA	NA	NA	81018246	81012500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_81013120_81014395_81014737_81014952
ENSMUST00000235769.2	chr18	+	1567	3	FSM	ENSMUSG00000037236.17	ENSMUST00000235769.2	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_2	10	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAGTTAATACATGCTAT	NA	False	NA	NA	False	AAGAAA	-30	NA	35695190	35710929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695346_35704895_35705989_35710610
ENSMUST00000235795.2	chr18	-	5262	3	FSM	ENSMUSG00000054008.10	ENSMUST00000235795.2	5262	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTGGGTCTTGTTCTTGT	NA	False	NA	-7	True	AATAAA	-18	NA	60860635	60817565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_60821920_60845879_60846705_60860552
ENSMUST00000235801.2	chr18	+	367	7	FSM	ENSMUSG00000117694.2	ENSMUST00000235801.2	367	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	414.731003851358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACCAGGGATTCTGGGA	NA	False	NA	NA	False	NA	NA	NA	35686460	35711992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690445_35710610_35710673_35711468_35711511_35711957
ENSMUST00000235830.2	chr19	-	1992	6	FSM	ENSMUSG00000025024.8	ENSMUST00000235830.2	1992	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	113.82794033101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTTAACAAAGGGGCGG	NA	False	NA	-2	True	AATAAA	-23	NA	53377853	53367820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53374803_53374988_53377733
ENSMUST00000235847.2	chr19	-	977	7	FSM	ENSMUSG00000059734.8	ENSMUST00000235847.2	977	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	709.089557108268	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	False	NA	-8	True	CATAAA	-15	NA	3962734	3958869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962469
ENSMUST00000235849.2	chr18	+	726	5	FSM	ENSMUSG00000057561.11	ENSMUST00000235849.2	726	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	803.50855627056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAATCTCTCCAGAAC	NA	False	NA	NA	False	AAAAAG	-10	NA	46730776	46749523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_46730868_46731707_46731768_46740570_46740810_46748859_46748995_46749322
ENSMUST00000235853.2	chr19	-	2025	5	FSM	ENSMUSG00000024668.9	ENSMUST00000235853.2	2025	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	101.25802437338	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTATTGTTTGATCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	10502520	10479004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10498312_10498423_10502422
ENSMUST00000235864.2	chr18	+	1101	4	FSM	ENSMUSG00000046727.14	ENSMUST00000235864.2	1101	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	406.851597295896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTACTATCCACTCACAAA	NA	False	NA	134	True	NA	NA	NA	36481711	36536150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36481870_36483746_36483862_36499567_36499795_36535549
ENSMUST00000235864.2-0	chr18	+	869	4	FSM	ENSMUSG00000046727.14	ENSMUST00000235864.2	1101	4	115	117	0	0	multi-exon	FALSE	canonical	3	70	junction_2	406.851597295896	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGACTTACTCCAGGT	NA	False	NA	17	True	AATAAA	-17	NA	36481826	36536033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36481870_36483746_36483862_36499567_36499795_36535549
ENSMUST00000235873.2	chr17	-	1492	3	FSM	ENSMUSG00000024026.14	ENSMUST00000235873.2	1492	3	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_1	1221.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGCAGCAAGTCCCT	NA	False	NA	-12	True	AATAAA	-24	NA	30816513	30811834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30812049_30813088_30813201_30815347
ENSMUST00000235900.2	chr19	+	1884	9	FSM	ENSMUSG00000024785.8	ENSMUST00000235900.2	1884	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	128.02514401476	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCTGGGATTTTATCT	NA	False	NA	113	True	NA	NA	NA	29078774	29121329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120546
ENSMUST00000235917.2	chr19	+	780	1	FSM	ENSMUSG00000118353.2	ENSMUST00000235917.2	780	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGACGTCACTCATA	NA	False	NA	NA	False	CATAAA	-17	NA	22418498	22419278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_22418500_22419300
ENSMUST00000235927.2	chr19	+	2690	5	FSM	ENSMUSG00000048832.10	ENSMUST00000235927.2	2690	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	43.0145324280062	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	False	NA	16	True	AATAAA	-19	NA	10666114	10691990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10666348_10683573_10683673_10687633_10687806_10688634_10688718_10689887
ENSMUST00000235928.2	chr18	-	474	2	FSM	ENSMUSG00000048799.9	ENSMUST00000235928.2	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTGTAAGAACTTTGC	NA	False	NA	NA	False	NA	NA	NA	53877612	53876998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_53877420_53877559
ENSMUST00000235932.2	chr19	+	1939	10	FSM	ENSMUSG00000025178.10	ENSMUST00000235932.2	1939	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	126.842081267405	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGTCCAGTTTCCTT	NA	False	NA	19	True	TTTAAA	-37	NA	42078908	42110470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108424_42110033
ENSMUST00000235936.2	chr19	-	2812	8	FSM	ENSMUSG00000025220.9	ENSMUST00000235936.2	2812	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	273.366241589587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGGAAAAGAAACAGCCA	5251	False	NA	4	True	NA	NA	NA	45772215	45756281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45767124_45767470_45767523_45772133
ENSMUST00000235953.2	chr19	-	3724	2	FSM	ENSMUSG00000040414.9	ENSMUST00000235953.2	3724	2	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACGCTGTGTTGGGTTTG	NA	False	NA	-7	True	ATTAAA	-15	NA	43663299	43652243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43655583_43662914
ENSMUST00000235956.2	chr18	+	1355	1	FSM	ENSMUSG00000117869.2	ENSMUST00000235956.2	1355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTCAAGATTT	NA	False	NA	NA	False	AATAAA	-5	NA	35686462	35687817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35686500_35687800
ENSMUST00000235957.2	chr19	-	6172	22	FSM	ENSMUSG00000024978.12	ENSMUST00000235957.2	6172	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	22.1767789322418	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTTTTAATGTCTTGG	4164	False	NA	0	True	AATAAA	-19	NA	55115648	55056067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55091397_55091560_55115445
ENSMUST00000235960.2	chr18	+	2638	13	FSM	ENSMUSG00000037236.17	ENSMUST00000235960.2	2638	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	348.249990029513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695263	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695346_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000235964.2	chr19	-	833	7	FSM	ENSMUSG00000071662.5	ENSMUST00000235964.2	833	7	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_5	75.5005518743627	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTCATGGAAATGTTG	NA	False	NA	-12	True	CATAAA	-12	NA	8775817	8770548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587
ENSMUST00000235969.2	chr17	-	703	2	FSM	ENSMUSG00000061613.14	ENSMUST00000235969.2	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	6014	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGAGTCCTGGCACAG	NA	False	NA	NA	False	NA	NA	NA	31877677	31873388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31874041_31877626
ENSMUST00000235977.2	chr19	-	1050	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235977.2	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	355.205486303351	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5844	False	NA	-2	True	AGTAAA	-19	NA	46327077	46318978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ENSMUST00000235988.2	chr19	+	4267	8	FSM	ENSMUSG00000025178.10	ENSMUST00000235988.2	4267	8	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	29.3445402215868	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACCTCTCTGTCCAGT	NA	False	NA	13	True	TTTAAA	-31	NA	42078932	42110464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42104458_42104945_42105006_42108231
ENSMUST00000235990.2	chr19	-	1260	5	FSM	ENSMUSG00000024666.7	ENSMUST00000235990.2	1260	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	58.8175143983491	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGGTGTCTTCATG	1765	False	NA	-6	True	AATAAA	-13	NA	10554471	10547843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10548633_10548892_10548969_10552200_10552300_10552603_10552876_10554447
ENSMUST00000235997.2	chr18	+	630	1	FSM	ENSMUSG00000117759.2	ENSMUST00000235997.2	630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAACTGCAGATGTGATTG	8670	False	NA	NA	False	NA	NA	NA	80055604	80056234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_80055600_80056200
ENSMUST00000236001.2	chr18	-	2258	12	FSM	ENSMUSG00000117679.2	ENSMUST00000236001.2	2258	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	13.4925752462923	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGTGATGAGTATATTGA	NA	False	NA	-3	True	AATAAA	-18	NA	36812369	36804207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809669_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ENSMUST00000236006.2	chr19	-	3513	16	FSM	ENSMUSG00000056917.14	ENSMUST00000236006.2	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_14	13.596404753545	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTATTTGTGTTTGTG	9047	False	NA	-6	True	AAAAAG	-21	NA	5711663	5701218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623
ENSMUST00000236014.2	chr19	-	539	3	FSM	ENSMUSG00000024853.11	ENSMUST00000236014.2	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_1	124	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGCAGAAGGGAAAAGGTG	4943	False	NA	-75	True	NA	NA	NA	5344406	5341231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5341451_5343107_5343348_5344326
ENSMUST00000236020.2	chr18	+	1524	5	FSM	ENSMUSG00000037058.17	ENSMUST00000236020.2	857	5	0	-667	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1458.22751997073	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	4664	False	NA	22	True	AATAAA	-16	NA	35731693	35750239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35731813_35733097_35733171_35743923_35744088_35746375_35746556_35749251
ENSMUST00000236039.2	chr17	-	3513	13	FSM	ENSMUSG00000002625.11	ENSMUST00000236039.2	3513	13	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_5	37.9549257526462	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569549	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUST00000236040.2	chr17	+	1134	4	FSM	ENSMUSG00000024181.10	ENSMUST00000236040.2	1134	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	672.139039848817	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342493	26345587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26342824_26343529_26343683_26344230_26344539_26345244
ENSMUST00000236044.2	chr19	+	2442	10	FSM	ENSMUSG00000024989.16	ENSMUST00000236044.2	2442	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	104.602716958317	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043484	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_38043530_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUST00000236046.2	chr19	-	1167	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	358.309542707226	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5874	False	NA	-6	True	AGTAAA	-15	NA	46327047	46318982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46327007
ENSMUST00000236057.2	chr19	+	3831	16	FSM	ENSMUSG00000036097.9	ENSMUST00000236057.2	3831	16	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	22.4950364895607	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTACAGTGTGTAAATAT	NA	False	NA	NA	False	TATAAA	-20	NA	44930369	44970814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ENSMUST00000236061.2	chr19	-	1164	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_9	336.647010794011	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5858	False	NA	-6	True	AGTAAA	-15	NA	46327063	46318982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
ENSMUST00000236063.2	chr19	+	1659	10	FSM	ENSMUSG00000003559.9	ENSMUST00000236063.2	1659	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	56.2713882519569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAACAAATAAAAA	6191	False	NA	-27	True	NA	NA	NA	46696113	46729477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46696239_46696508_46696637_46697406_46697558_46697985_46698101_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUST00000236082.2	chr17	-	2808	7	FSM	ENSMUSG00000044857.9	ENSMUST00000236082.2	2808	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_5	60.6840634397167	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	7061	False	NA	-1	True	AATAAA	-19	NA	27419445	27408573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336
ENSMUST00000236085.2	chr18	+	1796	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_4	51.8734724387826	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTAGTGTTTCATTTGGGG	9067	False	NA	44	True	AATAAA	-29	NA	38551959	38598250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ENSMUST00000236099.2	chr19	-	1529	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	65.3543227338483	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	1785	False	NA	-4	True	AATAAA	-15	NA	10554451	10547841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
ENSMUST00000236105.2	chr17	-	4381	12	FSM	ENSMUSG00000002625.11	ENSMUST00000236105.2	4381	12	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_7	23.6967759427869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569551	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUST00000236121.2	chr19	-	2437	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236121.2	2437	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	18.8110252586157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTCCCTGTTTACA	9764	False	NA	-23	True	AATAAA	-17	NA	10582773	10569560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574698_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
ENSMUST00000236135.2	chr18	+	3405	5	FSM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	98	7376	0	1339	multi-exon	FALSE	canonical	3	18	junction_2	2.8613807855649	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCACGAAATACGTCTT	NA	False	NA	7	True	AATAAA	-17	NA	63055399	63086874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_63055793_63066945_63067130_63069976_63070509_63082945_63083268_63084900
ENSMUST00000236138.2	chr19	-	954	6	FSM	ENSMUSG00000024944.7	ENSMUST00000236138.2	954	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	352.58791811405	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGGCTGAGCCATTTG	NA	False	NA	-11	True	AATAAA	-15	NA	6189994	6184415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187906_6188885_6188962_6189922
ENSMUST00000236139.2	chr19	-	2046	3	FSM	ENSMUSG00000038843.19	ENSMUST00000236139.2	2046	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATGATTCACCTTGT	6425	False	NA	NA	False	AATAAA	-22	NA	17350208	17306032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_17307853_17310473_17310621_17350129
ENSMUST00000236166.2	chr17	+	1047	5	FSM	ENSMUSG00000024181.10	ENSMUST00000236166.2	1047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	700.577752644201	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342473	26345587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345265
ENSMUST00000236206.2	chr19	+	3315	11	FSM	ENSMUSG00000034820.5	ENSMUST00000236206.2	3315	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	86.2092802429066	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAATGTAAAGTGAC	NA	False	NA	NA	False	TTTAAA	-5	NA	10502629	10524766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUST00000236211.2	chr19	-	423	2	FSM	ENSMUSG00000060803.7	ENSMUST00000236211.2	423	2	0	0	0	0	multi-exon	FALSE	canonical	3	4470	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	4085993	4085408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4085662_4085823
ENSMUST00000236213.2	chr18	+	1776	11	FSM	ENSMUSG00000024614.8	ENSMUST00000236213.2	1776	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	65.2935678302235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAACTATTGTTACCACA	4790	False	NA	NA	False	AATAAA	-22	NA	90528325	90550032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90549122
ENSMUST00000236216.2	chr18	-	7477	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTACATGAGAAAATCC	NA	False	NA	NA	False	AATAAA	-9	NA	46414060	46368417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ENSMUST00000236216.2-0	chr18	-	5151	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	163	2163	0	-2163	multi-exon	FALSE	canonical	3	105	junction_2	12.5642100826116	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46413897	46370580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ENSMUST00000236217.2	chr19	+	503	5	FSM	ENSMUSG00000038274.14	ENSMUST00000236217.2	503	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	6188.20864628852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATGTTTTCTTCATT	1107	False	NA	4	True	AATAAA	-16	NA	6107998	6109549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6108032_6108257_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000236218.2	chr19	+	1029	4	FSM	ENSMUSG00000056612.8	ENSMUST00000236218.2	605	4	-212	-212	78	0	multi-exon	FALSE	canonical	3	53	junction_1	1483.18268897964	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACAGGCTTGGCTGGTCTT	1658	False	NA	NA	False	AATAAA	-26	NA	6952413	6954689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6952986_6953911_6953996_6954225_6954259_6954349
ENSMUST00000236220.2	chr18	+	1571	9	FSM	ENSMUSG00000035765.11	ENSMUST00000236220.2	1571	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	64.1424196612507	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTTTGTGTTATCTGT	NA	False	NA	NA	False	NA	NA	NA	75151851	75239490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75238937
ENSMUST00000236229.2	chr19	-	1386	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACTACCCATTGCCAT	3648	False	NA	NA	False	NA	NA	NA	5660057	5653445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ENSMUST00000236229.2-0	chr19	-	1810	13	FSM	ENSMUSG00000024926.11	ENSMUST00000236229.2	1386	13	-22	-402	0	0	multi-exon	FALSE	canonical	3	222	junction_9	61.0948147463342	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3626	False	NA	-5	True	AATAAA	-16	NA	5660079	5653043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ENSMUST00000236240.2	chr18	+	6301	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	14.1470845052965	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTCACAATTGGGGGG	NA	False	NA	2	True	AATAAA	-13	NA	42408436	42474496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ENSMUST00000236267.2	chr17	-	1881	10	FSM	ENSMUSG00000024045.7	ENSMUST00000236267.2	1881	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	215.865069881771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTGTTTTTG	NA	False	NA	-9	True	AATAAA	-14	NA	32534704	32523665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628
ENSMUST00000236286.2	chr19	-	1046	2	FSM	ENSMUSG00000040414.9	ENSMUST00000236286.2	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43654413	43652239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_43653083_43654210
ENSMUST00000236293.2	chr17	-	861	5	FSM	ENSMUSG00000061613.14	ENSMUST00000236293.2	861	5	0	0	0	0	multi-exon	FALSE	canonical	3	5958	junction_1	274.417906667914	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGAGGTGGAGGTGGCGG	2746	False	NA	NA	False	NA	NA	NA	31868286	31866262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818
ENSMUST00000236305.2	chr17	-	882	1	FSM	ENSMUSG00000118161.2	ENSMUST00000236305.2	882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTTTTTATATGAGAAAAA	7279	False	NA	NA	False	NA	NA	NA	31863753	31862871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31862900_31863800
ENSMUST00000236321.2	chr17	-	1480	7	FSM	ENSMUSG00000002076.13	ENSMUST00000236321.2	1480	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	409.106512889845	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCAATATAATCTTGGG	NA	False	NA	-26	True	AATAAA	-17	NA	32243003	32165068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32242849
ENSMUST00000236322.2	chr17	+	1108	5	FSM	ENSMUSG00000037649.11	ENSMUST00000236322.2	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	3.83242742918897	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTACTAGACAAGTGTCTA	6798	False	NA	28	True	AATAAA	-36	NA	34354601	34358074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
ENSMUST00000236326.2	chr17	-	937	6	FSM	ENSMUSG00000024194.17	ENSMUST00000236326.2	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_5	250.477144665936	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGCCTTTTCTCTGTGA	9276	False	NA	-21	True	AATAAA	-14	NA	27158519	27156949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158343_27158424
ENSMUST00000236326.2-0	chr17	-	860	6	FSM	ENSMUSG00000024194.17	ENSMUST00000236326.2	937	6	81	-4	0	0	multi-exon	FALSE	canonical	3	300	junction_5	250.477144665936	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9357	False	NA	-17	True	AATAAA	-18	NA	27158438	27156945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158343_27158424
ENSMUST00000236330.2	chr18	-	760	4	FSM	ENSMUSG00000006050.13	ENSMUST00000236330.2	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	696.127542592272	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCCATTCTGATGTCAGA	NA	False	NA	-12	True	NA	NA	NA	36803343	36800301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803300
ENSMUST00000236335.2	chr17	-	1935	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	0	7930	0	0	multi-exon	FALSE	canonical	3	2881	junction_3	241.0424029087	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTCTGGGCAGCAAG	NA	False	NA	-17	True	AATAAA	-19	NA	30831633	30811839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUST00000236339.2	chr19	-	2832	7	FSM	ENSMUSG00000025050.9	ENSMUST00000236339.2	2832	7	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_4	32.688768033616	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTTAAAAAGAAAAACT	NA	False	NA	NA	False	NA	NA	NA	47039329	47029262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ENSMUST00000236370.2	chr19	-	662	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	45.8427263102398	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTGTTATGAATGTAAGA	NA	False	NA	NA	False	TATAAA	-31	NA	53932659	53919534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
ENSMUST00000236415.2	chr18	-	1956	10	FSM	ENSMUSG00000024644.18	ENSMUST00000236415.2	1956	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	195.289591866433	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAACTGCCGTGGTCTGA	NA	False	NA	-4	True	AATAAA	-19	NA	84698865	84685595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84698693
ENSMUST00000236421.2	chr18	+	864	3	FSM	ENSMUSG00000036299.6	ENSMUST00000236421.2	524	3	0	-340	0	0	multi-exon	FALSE	canonical	3	91	junction_1	354	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	False	NA	26	True	ATTAAA	-17	NA	75138939	75143004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75138972_75141721_75141898_75142348
ENSMUST00000236441.2	chr18	+	987	1	FSM	ENSMUSG00000024608.12	ENSMUST00000236441.2	987	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAATAAATCAGCCG	NA	False	NA	NA	False	NA	NA	NA	60907736	60908723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_60907700_60908700
ENSMUST00000236451.2	chr19	-	984	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236451.2	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	206.828727330078	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889298	4875393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884221_4884339_4888858_4888932_4889224
ENSMUST00000236475.2	chr17	-	753	6	FSM	ENSMUSG00000061613.14	ENSMUST00000236475.2	532	6	-14	-207	0	0	multi-exon	FALSE	canonical	3	82	junction_5	2542.17667364013	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877729	31866055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31877626
ENSMUST00000236501.2	chr19	-	3183	18	FSM	ENSMUSG00000025041.18	ENSMUST00000236501.2	3183	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_17	35.7064153463466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGGTATAAGGATTTTTT	7580	False	NA	NA	False	AAAACA	-21	NA	46950359	46876108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950026
ENSMUST00000236503.2	chr17	-	1987	15	FSM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_11	68.7455007804221	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTTCGTTTGTGCTGTG	NA	False	NA	-1	True	AATAAA	-16	NA	32569569	32540398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUST00000236507.2	chr18	+	2661	14	FSM	ENSMUSG00000037236.17	ENSMUST00000236507.2	1846	14	6	-821	0	0	multi-exon	FALSE	canonical	3	44	junction_1	325.222090707295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695269	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695313_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000236510.2	chr19	+	1284	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	10.3332236114429	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGACAGTTCTTGTTCTT	NA	False	NA	3	True	TATAAA	-17	NA	4036569	4040005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
ENSMUST00000236515.2	chr17	-	1701	6	FSM	ENSMUSG00000039615.10	ENSMUST00000236515.2	1701	6	0	0	0	0	multi-exon	FALSE	canonical	3	1378	junction_3	90.6986218197388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	6765	False	NA	-17	True	AATAAA	-17	NA	26051915	26049607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019
ENSMUST00000236522.2	chr18	+	795	3	FSM	ENSMUSG00000024537.6	ENSMUST00000236522.2	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_2	23.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	67774677	67779557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67774806_67777378_67777551_67779062
ENSMUST00000236539.2	chr18	-	484	5	FSM	ENSMUSG00000024352.13	ENSMUST00000236539.2	484	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	71.3810198862415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGCTGTAATGCCCAACC	NA	False	NA	-11	True	AATAAA	-22	NA	35793880	35789745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35789898_35790001_35790105_35793335_35793398_35793496_35793628_35793844
ENSMUST00000236547.2	chr17	-	926	6	FSM	ENSMUSG00000024177.10	ENSMUST00000236547.2	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	147.011019995101	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTCTACTTACTAGTTC	NA	False	NA	-2	True	ATTAAA	-20	NA	26314447	26310709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26311127_26311480_26311532_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ENSMUST00000236549.2	chr19	+	1954	2	FSM	ENSMUSG00000047368.5	ENSMUST00000236549.2	1954	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCTGTGCTTGTGTGC	4437	False	NA	12	True	AGTAAA	-15	NA	21657997	21663001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_21658412_21661461
ENSMUST00000236564.2	chr19	+	1858	5	FSM	ENSMUSG00000071645.7	ENSMUST00000236564.2	1858	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	17.1955662890176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGTCCGCATCTCA	1440	False	NA	NA	False	AATAAA	-24	NA	8931293	8940865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707
ENSMUST00000236565.2	chr17	-	1408	6	FSM	ENSMUSG00000039615.10	ENSMUST00000236565.2	1408	6	0	0	0	0	multi-exon	FALSE	canonical	3	1486	junction_1	49.0167318372002	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6787	False	NA	-19	True	AATAAA	-15	NA	26051893	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUST00000236574.2	chr18	-	596	4	FSM	ENSMUSG00000024352.13	ENSMUST00000236574.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	92.3808541972969	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCTCCCATTTTTCTTGAA	NA	False	NA	-42	True	NA	NA	NA	35795175	35793109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_35793398_35793496_35793628_35793844_35793911_35795064
ENSMUST00000236585.2	chr19	-	515	4	FSM	ENSMUSG00000041360.9	ENSMUST00000236585.2	515	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	733.559510575356	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	9425	False	NA	-17	True	TATAAA	-10	NA	27389664	27367460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27389581
ENSMUST00000236586.3-1	chr18	-	2908	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	27	3636	0	711	multi-exon	FALSE	canonical	3	260	junction_4	29.1315979650963	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAACATTTCTTTGAG	NA	False	NA	-8	True	NA	NA	NA	64622144	64589620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ENSMUST00000236649.2	chr18	+	2822	8	FSM	ENSMUSG00000060450.15	ENSMUST00000236649.2	2822	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	44.1310663864829	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	985	False	NA	16	True	AATAAA	-21	NA	38429746	38450895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUST00000236661.2	chr17	-	1587	4	FSM	ENSMUSG00000024190.8	ENSMUST00000236661.2	1587	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	230.1608133458	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	26727446	26724564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26727285
ENSMUST00000236665.2	chr17	-	1897	11	FSM	ENSMUSG00000024037.14	ENSMUST00000236665.2	1897	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	145.464634877347	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGAATGTTCAGCAG	NA	False	NA	-17	True	AATAAA	-17	NA	31731283	31715095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722626_31728742_31728887_31729551_31729621_31731140
ENSMUST00000236683.2	chr17	-	627	5	FSM	ENSMUSG00000057411.10	ENSMUST00000236683.2	627	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	82.996987897152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTTTTGTTTGTTCC	8378	False	NA	-7	True	AATAAA	-17	NA	26011361	26009479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011304
ENSMUST00000236685.2	chr19	+	2195	5	FSM	ENSMUSG00000025209.6	ENSMUST00000236685.2	2195	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	67.8122407829147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	1658	False	NA	26	True	AATGAA	-19	NA	44994101	45001201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44994627_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ENSMUST00000236722.2	chr19	+	714	5	FSM	ENSMUSG00000024740.11	ENSMUST00000236722.2	714	5	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	1453.91237270339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTCTTCAGAGTATTC	753	False	NA	NA	False	NA	NA	NA	10583073	10587324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155
ENSMUST00000236727.2	chr19	-	2920	17	FSM	ENSMUSG00000025041.18	ENSMUST00000236727.2	2920	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	37.5860990759882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGGTATAAGGATTTTTT	7896	False	NA	NA	False	AAAACA	-21	NA	46917664	46876108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46917474
ENSMUST00000236736.2-1	chr18	+	3645	30	FSM	ENSMUSG00000024589.19	ENSMUST00000236736.2	4802	30	-253	1410	0	0	multi-exon	FALSE	canonical	3	102	junction_13	18.1799042339286	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATATTTTTTTTTGT	NA	False	NA	15	True	ATTAAA	-23	NA	65020775	65346388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ENSMUST00000236744.2	chr17	-	740	4	FSM	ENSMUSG00000024194.17	ENSMUST00000236744.2	740	4	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_2	77.9016473937918	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTTCTCTGTGACATG	9663	False	NA	-17	True	AATAAA	-18	NA	27158132	27156945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27157151_27157391_27157592_27157700_27157761_27157857
ENSMUST00000236749.2	chr19	-	2465	14	FSM	ENSMUSG00000041491.9	ENSMUST00000236749.2	2465	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	15.7062532302438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAAACAGAATAGT	471	False	NA	NA	False	ATTAAA	-31	NA	15962057	15933344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ENSMUST00000236755.2	chr18	+	489	4	FSM	ENSMUSG00000024594.10	ENSMUST00000236755.2	489	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	295.732987676384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCTGTGCATGGCATC	NA	False	NA	NA	False	NA	NA	NA	57506963	57517274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245
ENSMUST00000236759.2	chr18	+	3615	10	FSM	ENSMUSG00000045629.9	ENSMUST00000236759.2	3615	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.32049379893857	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTTTGTCACCTTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	62111029	62148790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_62111144_62120626_62120761_62122263_62122306_62122414_62124116_62124208_62124390_62140718_62140870_62141527_62141651_62144877_62145029_62146103_62146301_62147969
ENSMUST00000236769.2	chr19	-	3324	7	FSM	ENSMUSG00000024764.11	ENSMUST00000236769.2	3324	7	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_3	27.2605738914075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTTGTATGTCATTA	NA	False	NA	-2	True	NA	NA	NA	7218421	7203077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ENSMUST00000236773.2	chr19	-	2395	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236773.2	2395	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	63.7916224417439	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGGAAAGGAGAAGAGAAA	9910	False	NA	NA	False	AAAAAG	-3	NA	5821426	5808690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809368_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000236801.2	chr19	-	1005	7	FSM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	705.446824517782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTTGTTCCATTT	NA	False	NA	-1	True	CATAAA	-22	NA	3962488	3958862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962202
ENSMUST00000236803.2	chr18	+	729	3	FSM	ENSMUSG00000024425.5	ENSMUST00000236803.2	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_1	54	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTATGCCTTGATTTGTA	9102	False	NA	NA	False	NA	NA	NA	38551994	38581149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_38552230_38575969_38576058_38580743
ENSMUST00000236817.2	chr19	-	1477	5	FSM	ENSMUSG00000024970.6	ENSMUST00000236817.2	1477	5	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_1	7.5291101731878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAAGCATAACGTGG	NA	False	NA	NA	False	ATTAAA	-7	NA	7360286	7350598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ENSMUST00000236822.2	chr19	+	1945	1	FSM	ENSMUSG00000117814.2	ENSMUST00000236822.2	1945	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTGTGTGTTCCCTCTT	6021	False	NA	NA	False	GATAAA	-23	NA	46869933	46871878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46869900_46871900
ENSMUST00000236842.2	chr17	-	1886	3	FSM	ENSMUSG00000057411.10	ENSMUST00000236842.2	1886	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTGTTCCAGGAAT	9984	False	NA	-1	True	AATAAA	-23	NA	26011875	26009473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26009753_26009906_26009958_26010319
ENSMUST00000236853.2	chr17	-	2475	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	0	3751	0	0	multi-exon	FALSE	canonical	3	120	junction_2	62.6156118212543	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGGTCGTGTCGACCT	1911	False	NA	-21	True	NA	NA	NA	31856173	31831618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ENSMUST00000236856.2	chr18	+	1082	4	FSM	ENSMUSG00000024498.17	ENSMUST00000236856.2	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_2	36.6090456338624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCCAAGGTAACTGTTAC	NA	False	NA	8	True	NA	NA	NA	42685906	42701091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_42686563_42693998_42694118_42697147_42697299_42700935
ENSMUST00000236857.2	chr18	-	3354	11	FSM	ENSMUSG00000073542.4	ENSMUST00000236857.2	3354	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.545671716211	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTTTTGGATGTCTTG	3253	False	NA	-5	True	AATAAA	-17	NA	67771983	67750870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67771823
ENSMUST00000236866.2	chr18	-	4676	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_5	66.5663307452716	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTTTTTTCCTCCAT	NA	False	NA	-22	True	AATAAA	-15	NA	66135710	66113827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUST00000236873.2	chr18	-	2482	14	FSM	ENSMUSG00000024587.11	ENSMUST00000236873.2	2482	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1471.99684444606	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649550	64632725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ENSMUST00000236879.2	chr18	+	6987	27	FSM	ENSMUSG00000040560.11	ENSMUST00000236879.2	6987	27	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	8.74837262973172	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAAGGTGGTTTTTATCC	NA	False	NA	2	True	AATAAA	-11	NA	63841785	64122825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_63841991_63853288_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226
ENSMUST00000236888.2	chr17	-	719	6	FSM	ENSMUSG00000024194.17	ENSMUST00000236888.2	719	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	368.320838400436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9387	False	NA	-18	True	AATAAA	-17	NA	27158408	27156946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27157151_27157391_27157442_27157545_27157624_27157700_27157761_27157857_27158067_27158290
ENSMUST00000236904.2	chr18	-	2951	10	FSM	ENSMUSG00000042211.8	ENSMUST00000236904.2	2951	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	80.8331615118449	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGATGTTTTATGAT	NA	False	NA	NA	False	AATAAA	-19	NA	62663842	62646941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759
ENSMUST00000236910.2	chr17	-	1375	6	FSM	ENSMUSG00000062202.15	ENSMUST00000236910.2	1375	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	4.24264068711928	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAAACCCAAAAT	NA	False	NA	NA	False	NA	NA	NA	30795233	30732449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ENSMUST00000236917.2	chr19	+	813	5	FSM	ENSMUSG00000024902.6	ENSMUST00000236917.2	813	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	253.71871728353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACTCTCAGCTTCTCTCC	3744	False	NA	10	True	AATAAA	-13	NA	5012375	5014972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013718_5014701
ENSMUST00000236950.2	chr19	-	2437	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	12.9229818620786	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTCCCTGTTTACA	9789	False	NA	-23	True	AATAAA	-17	NA	10582748	10569560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
ENSMUST00000236953.2	chr4	-	3257	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_3	17.5752351019521	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTGTATATTCAAATT	-2	True	NA	0	True	AATAAA	-19	NA	14826587	14809506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUST00000236954.2	chr17	-	2021	12	FSM	ENSMUSG00000024045.7	ENSMUST00000236954.2	2021	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	162.409186321627	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTCCTAAAACGGACAG	NA	False	NA	-29	True	AATAAA	-22	NA	32540087	32523970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32537744_32537784_32540058
ENSMUST00000236962.2	chr19	-	1478	6	FSM	ENSMUSG00000025024.8	ENSMUST00000236962.2	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	83.1903840596977	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGGATGTGCGCCCCT	NA	False	NA	-8	True	ATTAAA	-16	NA	53379005	53368309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_53369033_53369671_53369826_53371987_53372167_53372884_53373028_53377733_53377854_53378846
ENSMUST00000236964.2	chr19	-	1960	11	FSM	ENSMUSG00000024926.11	ENSMUST00000236964.2	1960	11	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_9	57.9537746829316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3895	False	NA	-5	True	AATAAA	-16	NA	5659810	5653043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490
ENSMUST00000236969.2	chr18	+	1656	7	FSM	ENSMUSG00000037815.8	ENSMUST00000236969.2	1656	7	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_4	198.935221170667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTATTATAAAATTT	NA	False	NA	NA	False	AAAAAG	-21	NA	35251939	35316103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402
ENSMUST00000236970.2	chr19	-	2217	10	FSM	ENSMUSG00000024826.16	ENSMUST00000236970.2	2217	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	234.668087116913	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGCTGGACAGTTTGT	7071	False	NA	-26	True	AATAAA	-14	NA	5957100	5947414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954341_5954481_5954575_5955416_5955581_5956551_5956660_5957028
ENSMUST00000236978.2	chr19	-	2731	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_12	26.041358331508	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCCAAGAGTAAATTAAA	9889	False	NA	65	True	NA	NA	NA	5821447	5808378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUST00000236980.2	chr19	-	999	9	FSM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_8	339.490035752156	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATATGCTCATTCTGC	-2	True	NA	-8	True	AGTAAA	-13	NA	46327056	46318984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46327007
ENSMUST00000236985.2	chr19	-	2722	11	FSM	ENSMUSG00000013662.7	ENSMUST00000236985.2	2722	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	174.081704954886	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTTTCCCCACTTAGT	NA	False	NA	-18	True	AATAAA	-17	NA	32717151	32650221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32692290_32692382_32717041
ENSMUST00000237004.2	chr18	-	4343	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTGTTTGTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	63825508	63794164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ENSMUST00000237004.2-0	chr18	-	1216	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	115	3012	0	0	multi-exon	FALSE	canonical	3	853	junction_1	53.8088074120031	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGTCTTCGTCATTCT	NA	False	NA	-7	True	AATAAA	-19	NA	63825393	63797176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ENSMUST00000237006.2	chr19	+	728	1	FSM	ENSMUSG00000117771.2	ENSMUST00000237006.2	728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACGGACCTGCTTGGTG	5729	False	NA	NA	False	AAAAAG	-28	NA	5486025	5486753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5486000_5486800
ENSMUST00000237018.2	chr18	+	2686	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237018.2	1888	14	0	-798	0	0	multi-exon	FALSE	canonical	0	0	junction_5	402.910667415446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695269	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712364_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000237027.2	chr18	-	848	1	FSM	ENSMUSG00000024587.11	ENSMUST00000237027.2	848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAAATAGGAA	NA	False	NA	NA	False	NA	NA	NA	64649570	64648722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64648700_64649600
ENSMUST00000237033.2	chr19	+	989	6	FSM	ENSMUSG00000069833.14	ENSMUST00000237033.2	989	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	28.9799930986879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTTCTGTGATCACC	6461	False	NA	13	True	AATAAA	-14	NA	8977023	9054278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9022988_9023081_9053939
ENSMUST00000237039.2	chr19	+	2166	6	FSM	ENSMUSG00000025203.7	ENSMUST00000237039.2	2166	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1062.75159844622	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATAAGGATTTTCTTTTC	1469	False	NA	NA	False	AGTAAA	-31	NA	44282514	44292417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288263_44289660_44289884_44291439
ENSMUST00000237061.2	chr18	+	1854	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTACACATACGGTTA	NA	False	NA	NA	False	AATAGA	-27	NA	35695271	35723634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000237061.2-0	chr18	+	2694	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237061.2	1854	14	-2	-838	0	0	multi-exon	FALSE	canonical	3	171	junction_1	296.625019792437	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695269	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695346_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000237071.2	chr19	+	1327	5	FSM	ENSMUSG00000071649.7	ENSMUST00000237071.2	909	5	0	-418	0	0	multi-exon	FALSE	canonical	3	30	junction_2	75.1644031440415	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4822	False	NA	19	True	AATAAA	-16	NA	8897847	8904600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8898013_8899169_8899345_8903067_8903263_8903445_8903737_8904099
ENSMUST00000237081.2	chr19	-	2493	12	FSM	ENSMUSG00000024937.16	ENSMUST00000237081.2	2493	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.86336897470469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACCCCTACCCTGCT	NA	False	NA	NA	False	NA	NA	NA	5776309	5765823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5766523_5766923_5766973_5767066_5767225_5769975_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ENSMUST00000237084.2	chr19	+	686	3	FSM	ENSMUSG00000056612.8	ENSMUST00000237084.2	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	1484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTTTATATTGACTC	1853	False	NA	NA	False	ATTAAA	-14	NA	6952608	6954618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6952875_6953911_6953996_6954282
ENSMUST00000237096.2	chr19	+	938	4	FSM	ENSMUSG00000040385.8	ENSMUST00000237096.2	938	4	0	0	0	0	multi-exon	FALSE	canonical	3	3675	junction_3	178.915249955577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGTCTGCTATCTGTACT	3385	False	NA	NA	False	NA	NA	NA	4242171	4244241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765
ENSMUST00000237103.2	chr17	-	4071	13	FSM	ENSMUSG00000024045.7	ENSMUST00000237103.2	4071	13	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_6	76.8282265114124	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540099	32522647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUST00000237137.2	chr18	-	1484	5	FSM	ENSMUSG00000024505.17	ENSMUST00000237137.2	1484	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	81.4996165635152	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTTCACTGAGCAA	NA	False	NA	-114	True	NA	NA	NA	49888634	49830645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_49831568_49833325_49833455_49857179_49857275_49861435_49861527_49888387
ENSMUST00000237137.2-1	chr18	-	2918	5	FSM	ENSMUSG00000024505.17	ENSMUST00000237137.2	1484	5	0	-1434	0	0	multi-exon	FALSE	canonical	3	24	junction_2	81.4996165635152	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGTGT	NA	False	NA	NA	False	NA	NA	NA	49888634	49829211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_49831568_49833325_49833455_49857179_49857275_49861435_49861527_49888387
ENSMUST00000237158.2	chr17	-	1613	7	FSM	ENSMUSG00000019214.15	ENSMUST00000237158.2	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_6	169.684756730434	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCTTGGCAGGGCCC	5737	False	NA	NA	False	NA	NA	NA	25946330	25943754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ENSMUST00000237161.2	chr18	+	2534	2	FSM	ENSMUSG00000024521.9	ENSMUST00000237161.2	2534	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTGTGTTTTATGTA	NA	False	NA	27	True	AATAAA	-39	NA	66591645	66598636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_66591884_66596340
ENSMUST00000237166.2	chr19	+	2513	6	FSM	ENSMUSG00000025086.14	ENSMUST00000237166.2	2513	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_4	16.6901168360201	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACGTGGTTCGGCTTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	57441370	57475449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504
ENSMUST00000237167.2	chr19	-	732	3	FSM	ENSMUSG00000024844.16	ENSMUST00000237167.2	732	3	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_2	2653	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCTGTTGGATGCCCTT	8743	False	NA	-107	True	NA	NA	NA	5416634	5414766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5415187_5415845_5415985_5416461
ENSMUST00000237192.2	chr18	-	1104	4	FSM	ENSMUSG00000078963.4	ENSMUST00000237192.2	1104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.9901932498329	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACCTTATGTGTATG	NA	False	NA	NA	False	AATACA	-14	NA	80280048	80272972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_80273777_80276629_80276725_80278663_80278731_80279910
ENSMUST00000237219.2	chr19	+	1719	9	FSM	ENSMUSG00000003559.9	ENSMUST00000237219.2	1719	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_4	13.865424623862	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTCTGTAGTTTGTCT	6484	False	NA	34	True	AATAAA	-44	NA	46696406	46729538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUST00000237248.2	chr17	+	2014	11	FSM	ENSMUSG00000006705.14	ENSMUST00000237248.2	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	40.2970222224918	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACATGCTTGTCTTTCG	NA	False	NA	NA	False	GATAAA	-16	NA	31783780	31824505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUST00000237248.2-0	chr17	+	4176	11	FSM	ENSMUSG00000006705.14	ENSMUST00000237248.2	2014	11	0	-2162	0	0	multi-exon	FALSE	canonical	3	26	junction_5	40.2970222224918	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGATTCTGTAAAGCTT	NA	False	NA	29	True	ATTAAA	-22	NA	31783780	31826667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUST00000237263.2	chr18	+	1266	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	205.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGATGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	75138970	75143223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75139186_75141721_75141898_75142348
ENSMUST00000237263.2-0	chr18	+	1047	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	0	219	0	0	multi-exon	FALSE	canonical	3	388	junction_1	205.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	False	NA	26	True	ATTAAA	-17	NA	75138970	75143004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_75139186_75141721_75141898_75142348
ENSMUST00000237291.2	chr18	+	1169	2	FSM	ENSMUSG00000046668.10	ENSMUST00000237291.2	1169	2	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTGGCTGAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	35962945	35992267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35963293_35991445
ENSMUST00000237320.2	chr19	+	1918	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237320.2	772	4	0	-1146	0	0	multi-exon	FALSE	canonical	3	113	junction_1	87.4541149530554	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	False	NA	10	True	ATTAAA	-22	NA	3758292	3767880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3758437_3764406_3764626_3765637_3765803_3766490
ENSMUST00000237323.2	chr17	-	975	9	FSM	ENSMUSG00000061613.14	ENSMUST00000237323.2	975	9	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	2395.95355495469	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877729	31866055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31871475_31871543_31873952_31874041_31877626
ENSMUST00000237324.2	chr19	+	655	3	FSM	ENSMUSG00000025202.9	ENSMUST00000237324.2	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGCAGAAATTCTCCTGT	NA	False	NA	7	True	ATTAAA	-25	NA	44226253	44230457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_44226317_44226814_44227048_44230098
ENSMUST00000237335.2	chr18	-	973	1	FSM	ENSMUSG00000117929.2	ENSMUST00000237335.2	973	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGGGTGTGCTCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	45204361	45203388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_45203400_45204400
ENSMUST00000237341.2	chr19	-	780	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_6	307.096076171611	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTACCTGTTGTGTTGTTCC	NA	False	NA	-5	True	CATAAA	-18	NA	3962774	3958866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
ENSMUST00000237343.2	chr17	-	896	3	FSM	ENSMUSG00000024026.14	ENSMUST00000237343.2	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	3068	junction_1	272.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTCAAATGTACAGAAT	NA	False	NA	NA	False	NA	NA	NA	30831543	30818442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_30819154_30822993_30823077_30831441
ENSMUST00000237347.2	chr19	+	1940	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	10.6880482315528	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCTCAATTCATACAAAA	NA	False	NA	NA	False	AATAAA	-16	NA	18609313	18629792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
ENSMUST00000237359.2	chr17	-	2044	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	11.5648646230728	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTCCTGTAGTGTTCC	6591	False	NA	-4	True	AATAAA	-20	NA	25973352	25967588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
ENSMUST00000237365.2	chr18	+	2687	14	FSM	ENSMUSG00000037236.17	ENSMUST00000237365.2	1951	14	154	-890	0	0	multi-exon	FALSE	canonical	3	55	junction_1	322.705042381891	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695505	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35695575_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUST00000237369.2	chr18	-	2103	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237369.2	2103	15	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_12	1341.18505510642	3077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649626	64633283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644970_64645054_64645121_64648396_64648480_64649486
ENSMUST00000237371.2	chr19	+	2362	12	FSM	ENSMUSG00000024891.7	ENSMUST00000237371.2	2362	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.6197590193438	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACGGATTCCTGGAGTGT	4312	False	NA	13	True	ATTAAA	-14	NA	5074141	5081992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_5074311_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
ENSMUST00000237381.2	chr17	-	4570	14	FSM	ENSMUSG00000024045.7	ENSMUST00000237381.2	4570	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	145.1715981155	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540111	32522647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUST00000237381.2-0	chr17	-	3295	14	FSM	ENSMUSG00000024045.7	ENSMUST00000237381.2	4570	14	-48	1323	0	0	multi-exon	FALSE	canonical	3	68	junction_6	145.1715981155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTCCTAAAACGGACAG	NA	False	NA	-29	True	AATAAA	-22	NA	32540159	32523970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUST00000237386.2	chr19	-	1771	11	FSM	ENSMUSG00000059326.8	ENSMUST00000237386.2	1771	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	38.2137409841015	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACATTTTCTGCTTTTGT	9806	False	NA	-11	True	NA	NA	NA	61215814	61212848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709
ENSMUST00000237400.2	chr18	-	2745	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	0	0	0	0	multi-exon	FALSE	canonical	3	3478	junction_14	514.735973533014	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGACTTATTTTCTC	NA	False	NA	NA	False	AATAAA	-31	NA	64649723	64632717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUST00000237407.2	chr18	+	3674	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_13	99.0044268869321	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTCCACGAAGTTCTC	5977	False	NA	NA	False	AGTAAA	-10	NA	34757787	34766330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUST00000237411.2	chr17	-	1958	6	FSM	ENSMUSG00000057789.15	ENSMUST00000237411.2	1958	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.687987483235	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCGCCTGGCATCTTTA	NA	False	NA	-2	True	AATAAA	-18	NA	27247561	27238785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241847_27244766_27244868_27247384
ENSMUST00000237412.2	chr17	+	2094	15	FSM	ENSMUSG00000024193.9	ENSMUST00000237412.2	2094	15	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	7.18558647997674	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCATGAGTCATTTTGA	NA	False	NA	5	True	AATAAA	-15	NA	27152433	27156865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155744_27155840_27156030_27156109_27156253
ENSMUST00000237416.2	chr18	+	618	4	FSM	ENSMUSG00000060450.15	ENSMUST00000237416.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	98.2694707876708	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAGGATCAGAAATGAAA	991	False	NA	NA	False	GATAAA	-9	NA	38429752	38449867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_38429852_38432806_38432980_38433481_38433538_38449577
ENSMUST00000237430.2	chr19	+	4054	15	FSM	ENSMUSG00000025026.16	ENSMUST00000237430.2	4054	15	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	22.1124214791929	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	151	False	NA	8	True	AATAAA	-17	NA	53131404	53235518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ENSMUST00000237439.2	chr19	-	2643	18	FSM	ENSMUSG00000024660.10	ENSMUST00000237439.2	2643	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	147.305111410809	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATCTAGCCTGAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	9872824	9850040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9860555_9860568_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684
ENSMUST00000237440.2	chr19	+	2559	10	FSM	ENSMUSG00000045098.20	ENSMUST00000237440.2	1721	10	23	-861	0	0	multi-exon	FALSE	canonical	3	50	junction_2	94.5832966226067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGTCAGAGCCAAA	NA	False	NA	0	True	NA	NA	NA	3818168	3856324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916
ENSMUST00000237467.2	chr19	-	2101	10	FSM	ENSMUSG00000024824.8	ENSMUST00000237467.2	2101	10	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	31.4889751429854	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAGGAAAGACAC	6027	False	NA	-24	True	NA	NA	NA	4251606	4245218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ENSMUST00000237478.2	chr18	+	2165	3	FSM	ENSMUSG00000057561.11	ENSMUST00000237478.2	2165	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	841.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGAGAGGCTTTTTTT	NA	False	NA	27	True	AATAAA	-21	NA	46730864	46742316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_46731224_46731707_46731768_46740570
ENSMUST00000237487.2	chr18	-	1929	5	FSM	ENSMUSG00000052102.16	ENSMUST00000237487.2	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	550.877028019866	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCATTCTCCTGAGTT	NA	False	NA	-7	True	AATAAA	-17	NA	38472033	38460587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_38462027_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ENSMUST00000237491.2	chr17	+	2618	14	FSM	ENSMUSG00000061126.6	ENSMUST00000237491.2	2618	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	21.761482720107	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTCTACTGGCATGGGG	NA	False	NA	NA	False	AATAGA	-14	NA	32671696	32712294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_32671771_32684452_32684556_32687434_32687658_32689777_32689923_32700047_32700102_32700753_32700882_32701060_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
ENSMUST00000237503.2	chr18	-	1648	2	FSM	ENSMUSG00000024587.11	ENSMUST00000237503.2	1648	2	0	0	0	0	multi-exon	FALSE	canonical	3	4998	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64635026	64632725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64633721_64634373
ENSMUST00000237520.2	chr18	-	452	2	FSM	ENSMUSG00000024493.10	ENSMUST00000237520.2	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	1504	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGTGCGTCATGACAT	NA	False	NA	NA	False	AATAAA	-33	NA	42395156	42389938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_42390260_42395025
ENSMUST00000237553.2	chr18	+	5175	10	FSM	ENSMUSG00000042439.14	ENSMUST00000237553.2	5175	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	24.1476937016998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAATGAGTTCAATAAT	NA	False	NA	NA	False	NA	NA	NA	65715155	65820938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_65715881_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
ENSMUST00000237565.2	chr19	-	429	2	FSM	ENSMUSG00000038155.12	ENSMUST00000237565.2	429	2	0	0	0	0	multi-exon	FALSE	canonical	3	3855	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4090883	4090286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4090540_4090707
ENSMUST00000237581.2	chr19	+	2634	9	FSM	ENSMUSG00000034445.9	ENSMUST00000237581.2	2634	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	28.8693176226942	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCAGAGGTCTCTTTT	NA	False	NA	7	True	ATTAAA	-10	NA	10554854	10567186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10554928_10555097_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUST00000237585.2	chr18	-	2268	14	FSM	ENSMUSG00000024587.11	ENSMUST00000237585.2	2268	14	0	0	0	0	multi-exon	FALSE	canonical	3	3478	junction_13	534.16599817797	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTATGGTCTGACATC	NA	False	NA	-15	True	AATAAA	-21	NA	64649508	64633288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64633721_64634373_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUST00000237602.2	chr18	+	4417	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_6	86.5887404766016	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCCTTTCTTTTGTG	NA	False	NA	NA	False	TATAAA	-25	NA	42644551	42708858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUST00000237608.2	chr10	-	4882	14	FSM	ENSMUSG00000058298.11	ENSMUST00000237608.2	4882	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	11.0630254697519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTTCTGTGTGCTT	NA	False	NA	-17	True	AATAAA	-41	NA	53506535	53412410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819_53506228_53506490
ENSMUST00000237609.2	chr17	-	785	5	FSM	ENSMUSG00000024194.17	ENSMUST00000237609.2	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_4	189.078026221981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	9398	False	NA	-18	True	AATAAA	-17	NA	27158397	27156946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_27157151_27157391_27157442_27157545_27157761_27157857_27158067_27158290
ENSMUST00000237622.2	chr18	+	681	3	FSM	ENSMUSG00000037236.17	ENSMUST00000237622.2	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_2	45.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAACCTACAAGGACCAAG	7737	False	NA	NA	False	TTTAAA	-36	NA	35710953	35712329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_35711511_35711957_35712071_35712318
ENSMUST00000237634.2	chr19	-	775	5	FSM	ENSMUSG00000118346.2	ENSMUST00000237634.2	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	80.9073544246751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGGATTTCTTGATGT	5074	False	NA	-4	True	AATATA	-17	NA	8751831	8749888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8750987_8751698
ENSMUST00000237651.2	chr19	+	7385	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	12.0166551086398	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGGGGGTTGGATCCC	NA	False	NA	NA	False	NA	NA	NA	21249641	21264204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ENSMUST00000237700.2	chr18	+	1684	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_6	144.078210053585	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTGTGAGACCAGTG	NA	False	NA	NA	False	AATAAA	-11	NA	67908044	67925663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ENSMUST00000237704.2	chr19	-	743	2	FSM	ENSMUSG00000024844.16	ENSMUST00000237704.2	743	2	0	0	0	0	multi-exon	FALSE	canonical	3	1029	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8558	False	NA	-8	True	AATAAA	-15	NA	5416819	5414667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5415187_5416595
ENSMUST00000237704.2-0	chr19	-	558	2	FSM	ENSMUSG00000024844.16	ENSMUST00000237704.2	743	2	185	0	0	0	multi-exon	FALSE	canonical	3	1029	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8743	False	NA	-8	True	AATAAA	-15	NA	5416634	5414667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5415187_5416595
ENSMUST00000237720.2	chr19	-	425	5	FSM	ENSMUSG00000071528.5	ENSMUST00000237720.2	425	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2533.27548590752	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATTATGAACCTGGAA	NA	False	NA	-22	True	NA	NA	NA	47079073	47071924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_47072009_47073207_47073298_47074393_47074487_47074572_47074669_47079011
ENSMUST00000237726.2	chr19	-	4558	30	FSM	ENSMUSG00000024960.10	ENSMUST00000237726.2	4558	30	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_23	51.3241082764095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4365	False	NA	-9	True	AATAAA	-15	NA	6947128	6931081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ENSMUST00000237738.2	chr19	-	1357	8	FSM	ENSMUSG00000024792.10	ENSMUST00000237738.2	1357	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	215.875247420772	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGAAGCAGCTTTTTC	6427	False	NA	NA	False	AATAAA	-18	NA	6134986	6130791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134079_6134381_6134492_6134824
ENSMUST00000237759.2	chr17	-	1133	8	FSM	ENSMUSG00000073422.12	ENSMUST00000237759.2	1133	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	39.6227104533936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGTTCTTCTTGTGTC	NA	False	NA	-1	True	AATAAA	-23	NA	34247028	34245006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ENSMUST00000237781.2	chr19	-	1894	8	FSM	ENSMUSG00000024853.11	ENSMUST00000237781.2	1894	8	0	0	0	0	multi-exon	TRUE	canonical	3	1640	junction_7	472.274435955561	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	NA	False	NA	-25	True	AATAAA	-18	NA	5334436	5323959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885
ENSMUST00000237783.2	chr18	-	6478	15	FSM	ENSMUSG00000054008.10	ENSMUST00000237783.2	6478	15	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	9.29367790380062	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTTTTTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-13	NA	60881722	60819034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881572
ENSMUST00000237785.2	chr17	+	1761	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237785.2	1761	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	25.198412648419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAGAGTGACCATGAGC	NA	False	NA	18	True	AATAAA	-15	NA	25946690	25950432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25946822_25947154_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUST00000237792.2	chr18	-	617	3	FSM	ENSMUSG00000024346.7	ENSMUST00000237792.2	1024	3	0	407	0	122	multi-exon	FALSE	canonical	3	64	junction_1	1494	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587577	36537135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_36537514_36584132_36584300_36587505
ENSMUST00000237800.2	chr18	-	4393	4	FSM	ENSMUSG00000044906.7	ENSMUST00000237800.2	4393	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	21.483844059096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTAGGTAAATTACTGA	NA	False	NA	NA	False	AATAAA	-21	NA	70605575	70598045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUST00000237814.2	chr19	+	3130	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	19.4768308196049	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554535	10567193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUST00000237815.2	chr19	-	2371	2	FSM	ENSMUSG00000075289.6	ENSMUST00000237815.2	2371	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCGGAGTCCAGTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	4220027	4214322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4216564_4219897
ENSMUST00000237834.2	chr19	-	3327	6	FSM	ENSMUSG00000024764.11	ENSMUST00000237834.2	1569	6	-2	-1756	0	0	multi-exon	TRUE	canonical	3	441	junction_1	33.2060235499525	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218421	7203037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
ENSMUST00000237840.2	chr19	+	472	4	FSM	ENSMUSG00000038274.14	ENSMUST00000237840.2	472	4	0	0	0	0	multi-exon	FALSE	canonical	3	14010	junction_2	399.82023738453	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	1361	False	NA	1	True	AATAAA	-13	NA	6108252	6109546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUST00000237871.2	chr19	-	3170	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	0	0	0	0	multi-exon	TRUE	canonical	3	1017	junction_13	71.1689926176006	1512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTGTGACAGTAGATG	NA	False	NA	-29	True	AATAAA	-15	NA	41252419	41202230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ENSMUST00000237882.2	chr18	-	1071	5	FSM	ENSMUSG00000024493.10	ENSMUST00000237882.2	1071	5	0	0	0	0	multi-exon	FALSE	canonical	3	1881	junction_4	201.782680128895	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCACTGAGCTCATGCA	NA	False	NA	NA	False	NA	NA	NA	42348366	42335588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824
ENSMUST00000237893.2	chr19	-	806	7	FSM	ENSMUSG00000060803.7	ENSMUST00000237893.2	806	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1359.76024234667	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGAGGTGTCTTTGGTGC	NA	False	NA	NA	False	AATAAA	-12	NA	4087977	4085410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087865
ENSMUST00000237947.2	chr18	+	2678	1	FSM	ENSMUSG00000117775.2	ENSMUST00000237947.2	2678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTAGTCCTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	65767863	65770541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_65767900_65770500
ENSMUST00000237950.2	chr17	+	1046	5	FSM	ENSMUSG00000024181.10	ENSMUST00000237950.2	1046	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	613.108677152754	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342493	26345587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_26342824_26343529_26343693_26344242_26344366_26344451_26344539_26345244
ENSMUST00000237955.2	chr19	+	2193	4	FSM	ENSMUSG00000035372.3	ENSMUST00000237955.2	2193	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	122.806984962402	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCCAGCTTGTGTGGG	NA	False	NA	3	True	ATTAAA	-15	NA	3758370	3767873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_3758437_3764046_3764626_3765637_3765803_3766490
ENSMUST00000238001.2	chr19	-	1422	11	FSM	ENSMUSG00000025027.19	ENSMUST00000238001.2	1422	11	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_9	123.396758466339	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTGTCTGCCTCTTT	NA	False	NA	0	True	AATAAA	-17	NA	52993335	52979610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194
ENSMUST00000238009.2	chr19	+	3995	24	FSM	ENSMUSG00000024789.14	ENSMUST00000238009.2	3995	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	5.18285672006456	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTCTTTCTTGCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	29229840	29289740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ENSMUST00000238036.2	chr19	+	1291	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGGGGCTGGAGAG	5946	False	NA	3	True	ATTAAA	-16	NA	8848956	8853227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUST00000238036.2-0	chr19	+	1092	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	0	199	0	0	multi-exon	FALSE	canonical	3	1115	junction_4	107.257575490032	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGGCTCCTTCCAGA	5946	False	NA	33	True	AATAAA	-21	NA	8848956	8853028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUST00000238054.2	chr19	-	1310	8	FSM	ENSMUSG00000057858.9	ENSMUST00000238054.2	951	8	-11	-348	0	0	multi-exon	FALSE	canonical	3	34	junction_7	86.2054972440971	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9773	False	NA	NA	False	AGTAAA	-14	NA	60215129	60187330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60215075
ENSMUST00000238057.2	chr18	+	4007	5	FSM	ENSMUSG00000024594.10	ENSMUST00000238057.2	523	5	0	-3484	0	-234	multi-exon	FALSE	canonical	3	123	junction_1	350.033123432626	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-38	NA	57506963	57525791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_57507100_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUST00000238063.2	chr19	+	675	3	FSM	ENSMUSG00000071650.7	ENSMUST00000238063.2	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_2	41.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCCGATAGTAACACT	1702	False	NA	NA	False	NA	NA	NA	8885621	8886551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8886112_8886284_8886373_8886454
ENSMUST00000238065.2	chr19	-	2342	6	FSM	ENSMUSG00000033610.17	ENSMUST00000238065.2	2342	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	48.9097127368379	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTTAGTGTACATGTT	879	False	NA	-13	True	AATAAA	-17	NA	34855253	34788294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34855085
ENSMUST00000238095.2	chr19	-	679	6	FSM	ENSMUSG00000024953.18	ENSMUST00000238095.2	679	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	204.758394211324	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTACAGGGTTGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	6886898	6884073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6884320_6884433_6884489_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ENSMUST00000238129.2	chr19	-	3449	17	FSM	ENSMUSG00000024660.10	ENSMUST00000238129.2	3449	17	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_13	49.1273854382665	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACTAGAGGCTTCATTG	NA	False	NA	-31	True	AATAAA	-33	NA	9876825	9849687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ENSMUST00000238154.2	chr19	-	1884	1	FSM	ENSMUSG00000054237.7	ENSMUST00000238154.2	1884	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTTGTATTTTCCTCC	NA	False	NA	NA	False	NA	NA	NA	38212586	38210702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_38210700_38212600
ENSMUST00000238168.2	chr18	+	2012	4	FSM	ENSMUSG00000057561.11	ENSMUST00000238168.2	2012	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	796.694141785639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGAGAGGCTTTTTTT	NA	False	NA	27	True	AATAAA	-21	NA	46730767	46742316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_46730868_46731117_46731224_46731707_46731768_46740570
ENSMUST00000238190.2	chr19	+	3158	20	FSM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	81.8323060642279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAACTTGTTAGTTGGCTG	NA	False	NA	NA	False	ATTAAA	-1	NA	11889806	11921367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ENSMUST00000238190.2-0	chr19	+	4125	20	FSM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	0	-967	0	-121	multi-exon	FALSE	canonical	3	28	junction_5	81.8323060642279	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTTATACCTTTCT	NA	False	NA	7	True	AATAAA	-21	NA	11889806	11922334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ENSMUST00000238192.2	chr17	-	1802	9	FSM	ENSMUSG00000002076.13	ENSMUST00000238192.2	3115	9	0	1313	0	0	multi-exon	FALSE	canonical	1	2	junction_8	409.307036343134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32255323	32165055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418_32253677_32255269
ENSMUST00000238198.2	chr1	+	3506	3	FSM	ENSMUSG00000026614.8	ENSMUST00000238198.2	3506	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTATTGAGAGAAGAAAGT	NA	False	NA	NA	False	AATAAA	-30	NA	185187044	185197957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_185188627_185194883_185195124_185196273
ENSMUST00000238201.2	chr8	-	2646	2	FSM	ENSMUSG00000054648.9	ENSMUST00000238201.2	2646	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTCAATGTATTTT	NA	False	NA	0	True	NA	NA	NA	70161076	70157786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70160345_70160988
ENSMUST00000238213.2	chr4	+	1240	3	FSM	ENSMUSG00000095567.9	ENSMUST00000238213.2	1240	3	0	0	0	0	multi-exon	FALSE	canonical	3	1832	junction_2	118	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTACTCATCATCTGAC	NA	False	NA	NA	False	NA	NA	NA	156326177	156328598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156326258_156327022_156328081_156328496
ENSMUST00000238220.2	chr12	-	1018	6	FSM	ENSMUSG00000049882.11	ENSMUST00000238220.2	1018	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	78.351515620312	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAACGTTGACAATC	NA	False	NA	-59	True	NA	NA	NA	69629791	69624455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_69624715_69626607_69626785_69627891_69628012_69629049_69629120_69629304_69629400_69629494
ENSMUST00000238230.2	chr2	+	2159	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	5.43650214343336	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTTGGGGAGCATC	NA	False	NA	NA	False	AATAAA	-20	NA	150153350	150168932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ENSMUST00000238238.2	chrY	+	567	3	FSM	ENSMUSG00000096768.9	ENSMUST00000238238.2	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_2	100.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGCCAACGGGGCCTG	5062	False	NA	NA	False	NA	NA	NA	90797116	90827667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrY_+_90797249_90804564_90804950_90827617
ENSMUST00000238279.2	chr8	-	1369	2	FSM	ENSMUSG00000053226.8	ENSMUST00000238279.2	1369	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGCGTGCTTCTTTCT	399	False	NA	0	True	CATAAA	-15	NA	85559038	85542033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85543163_85558798
ENSMUST00000238293.2	chr4	-	2458	15	FSM	ENSMUSG00000028637.17	ENSMUST00000238293.2	2458	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	7.39173559470581	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTTGATATACCTAT	9783	False	NA	NA	False	ATTAAA	-26	NA	119272658	119181038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_119181391_119181737_119181806_119188319_119188435_119188678_119188816_119190776_119190919_119196957_119197071_119206926_119207072_119210266_119210422_119213834_119214045_119216754_119216935_119250753_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ENSMUST00000238320.2	chr4	+	667	2	FSM	ENSMUSG00000095567.9	ENSMUST00000238320.2	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	2068	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCCTTCATTCTCGAG	NA	False	NA	NA	False	NA	NA	NA	156325682	156327114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_156326258_156327022
ENSMUST00000238335.2	chr5	-	1232	2	FSM	ENSMUSG00000028958.16	ENSMUST00000238335.2	1232	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACGTTTTCCTACCCAGT	NA	False	NA	-15	True	ATTAAA	-7	NA	24651950	24650474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24651288_24651531
ENSMUST00000238339.2	chr8	+	1442	10	FSM	ENSMUSG00000031600.12	ENSMUST00000238339.2	1442	10	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	13.9505298806396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCGGAGTTTTGACTA	NA	False	NA	NA	False	AGTAAA	-17	NA	40964908	40997082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850
ENSMUST00000238355.2	chr13	+	449	3	FSM	ENSMUSG00000095909.3	ENSMUST00000238355.2	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	13.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCTAAGAATGGAAACAAG	NA	False	NA	NA	False	NA	NA	NA	66261293	66268018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_66261375_66267450_66267578_66267777
ENSMUST00000238357.2	chr12	+	1651	8	FSM	ENSMUSG00000097451.12	ENSMUST00000238357.2	1651	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	215.030040616066	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCATTTGTCAGGCTCCG	1330	False	NA	NA	False	NA	NA	NA	109617101	109627883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624491_109624556_109626156_109626242_109627179
ENSMUST00000238384.2	chr12	+	2352	8	FSM	ENSMUSG00000097451.12	ENSMUST00000238384.2	2352	8	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_5	36.3862499259469	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	901	False	NA	NA	False	ACTAAA	-5	NA	109616672	109628150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
ENSMUST00000238390.2	chr8	+	3818	9	FSM	ENSMUSG00000031600.12	ENSMUST00000238390.2	3818	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	14.5768437941826	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACCCTTTCATCTCC	NA	False	NA	NA	False	NA	NA	NA	40964823	40996657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065
ENSMUST00000238398.2	chr19	+	5764	8	FSM	ENSMUSG00000025019.18	ENSMUST00000238398.2	5764	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	34.4413135875021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGATAGCCACTGAGAG	NA	False	NA	NA	False	NA	NA	NA	41471467	41574975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_41471738_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
ENSMUST00000238405.2	chr4	+	737	4	FSM	ENSMUSG00000028613.16	ENSMUST00000238405.2	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	7.71722460186015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCACCTCATGAATAGCC	NA	False	NA	NA	False	NA	NA	NA	107659487	107700678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412
ENSMUST00000238418.2	chr8	-	3180	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	9.33742469849155	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTCAATGTATTTT	NA	False	NA	0	True	NA	NA	NA	70169552	70157786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
ENSMUST00000238443.2	chr3	+	5165	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	0	2052	0	-636	multi-exon	FALSE	canonical	3	123	junction_1	14.9695524315191	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAGACTACACTGCA	NA	False	NA	9	True	AATAAA	-23	NA	85878415	86035781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ENSMUST00000238459.2	chr8	-	1555	2	FSM	ENSMUSG00000054648.9	ENSMUST00000238459.2	1555	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGCATTTCAAAAGG	NA	False	NA	NA	False	AAGAAA	-23	NA	70169523	70162185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_70163635_70169417
ENSMUST00000238465.2	chr13	+	4614	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_14	17.5231768921923	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGACGTGCCATTAAC	NA	False	NA	NA	False	NA	NA	NA	63963288	64047317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ENSMUST00000238482.2	chrX	+	1163	2	FSM	ENSMUSG00000095562.9	ENSMUST00000238482.2	1163	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAAGCCTGCGCCGACCG	NA	False	NA	NA	False	NA	NA	NA	168792990	168801792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_168794060_168801698
ENSMUST00000238492.2	chr8	+	2044	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	228.433708510092	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72889651	72906984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUST00000238520.2	chr9	-	5376	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCAGAATCTGTTCT	8771	False	NA	NA	False	NA	NA	NA	122942212	122895224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ENSMUST00000238520.2-0	chr9	-	4791	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	-57	642	0	-642	multi-exon	FALSE	canonical	3	33	junction_1	93.3196418529109	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8714	False	NA	NA	False	AATAAA	-13	NA	122942269	122895866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ENSMUST00000238583.2	chr4	-	649	4	FSM	ENSMUSG00000045699.5	ENSMUST00000238583.2	1296	4	-63	710	0	0	multi-exon	FALSE	canonical	3	153	junction_2	62.9938268580519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGTTTTCTACCATTA	NA	False	NA	-2	True	AATACA	-20	NA	146994047	146976862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_146977116_146978205_146978333_146982168_146982273_146993882
ENSMUST00000238584.2	chr4	+	4618	18	FSM	ENSMUSG00000028613.16	ENSMUST00000238584.2	4618	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	23.2122745240813	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGAATTTTCTTC	NA	False	NA	8	True	AATAAA	-17	NA	107659065	107731095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ENSMUST00000238603.2	chrX	+	1257	12	FSM	ENSMUSG00000000037.18	ENSMUST00000238603.2	1257	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	112.927827460179	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAGAACCAGACTATG	178	False	NA	NA	False	AAAAAG	-11	NA	159865520	159985029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_159865683_159869958_159870037_159878108_159878187_159904019_159904098_159927758_159927837_159936828_159936907_159954485_159954532_159960242_159960314_159961032_159961268_159970259_159970349_159975199_159975444_159985009
ENSMUST00000238653.2	chr11	-	4390	19	FSM	ENSMUSG00000020807.16	ENSMUST00000238653.2	4390	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	5.57025832235613	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTATTTGAAGTAATT	NA	False	NA	0	True	AATAAA	-22	NA	72098257	72044922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
ENSMUST00000238680.2	chr10	-	4482	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACACGCAGCCTAAGCATC	NA	False	NA	NA	False	NA	NA	NA	14420780	14280305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ENSMUST00000238680.2-0	chr10	-	6744	24	FSM	ENSMUSG00000039116.8	ENSMUST00000238680.2	4482	24	-283	-1979	-140	0	multi-exon	FALSE	canonical	3	20	junction_19	18.4758566210825	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTTCCTTTATGAG	NA	False	NA	-2	True	AATAAA	-25	NA	14421063	14278326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ENSMUST00000238681.2	chrX	+	583	3	FSM	ENSMUSG00000095562.9	ENSMUST00000238681.2	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	106.5	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGCCTGCGCCGACCGC	NA	False	NA	NA	False	NA	NA	NA	168792689	168801793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_168792759_168793669_168794060_168801669
ENSMUST00000238684.2	chr11	-	6271	23	FSM	ENSMUSG00000017631.20	ENSMUST00000238684.2	6271	23	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_22	37.5075749925023	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCATGGTGTGGTTGTTT	NA	False	NA	-1	True	AATAAA	-36	NA	76514384	76307559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002
ENSMUST00000238687.2	chr8	-	403	2	FSM	ENSMUSG00000001910.6	ENSMUST00000238687.2	403	2	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTAGAACTGCCGGCC	NA	False	NA	NA	False	NA	NA	NA	85414220	85403680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_85403882_85414018
ENSMUST00000238692.2	chr7	-	629	5	FSM	ENSMUSG00000062444.16	ENSMUST00000238692.2	629	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	10.1612007164508	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACCCTACGTTCGGAAA	NA	False	NA	NA	False	NA	NA	NA	81139558	81127705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
ENSMUST00000238714.2	chr3	-	397	1	FSM	ENSMUSG00000118406.2	ENSMUST00000238714.2	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCCGCTGGGGAAAT	NA	False	NA	NA	False	NA	NA	NA	96322149	96321752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_96321800_96322100
ENSMUST00000238718.2	chrX	-	4524	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	15.5404688745065	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055505	105011689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUST00000238748.2	chr11	+	1468	8	FSM	ENSMUSG00000020376.18	ENSMUST00000238748.2	7879	8	1	6410	0	-6410	multi-exon	FALSE	canonical	3	19	junction_7	98.8135742141716	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGTGAGGTTTGATGGC	NA	False	NA	NA	False	NA	NA	NA	49916174	50010136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_49916475_49943602_49943798_49961997_49962249_49976567_49976640_49978205_49978289_49984549_49984647_49986602_49986808_50009871
ENSMUST00000238758.2	chrY	+	1272	3	FSM	ENSMUSG00000096768.9	ENSMUST00000238758.2	1272	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1011.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGCAGATGTGT	4125	False	NA	NA	False	AATAAA	-11	NA	90796179	90827727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrY_+_90797249_90804593_90804687_90827617
ENSMUST00000238786.2	chr8	+	3794	19	FSM	ENSMUSG00000004568.14	ENSMUST00000238786.2	3794	19	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_18	23.0217288664427	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCCCCAAGGGCAGACC	5850	False	NA	NA	False	NA	NA	NA	3476699	3504540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ENSMUST00000238792.2	chr7	-	1503	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238792.2	1503	12	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTTTTCCTAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	89629910	89604144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUST00000238808.2	chr18	-	4214	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAGGAAAG	NA	False	NA	NA	False	TTTAAA	-31	NA	81029751	81012436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_81013120_81014395_81017845_81029669
ENSMUST00000238808.2-0	chr18	-	6591	3	FSM	ENSMUSG00000024565.11	ENSMUST00000238808.2	4214	3	-144	-2233	91	-613	multi-exon	FALSE	canonical	3	38	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTCCCTGATTCTTCC	NA	False	NA	2	True	AATAAA	-27	NA	81029895	81010203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_81013120_81014395_81017845_81029669
ENSMUST00000238817.2	chr19	+	2692	22	FSM	ENSMUSG00000053799.9	ENSMUST00000238817.2	2692	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	21.0093381678108	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGCTTGCATTTTTT	1910	False	NA	NA	False	AATAAA	-38	NA	37538906	37671703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_37539014_37558830_37559003_37560046_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ENSMUST00000238837.2	chr14	+	6165	16	FSM	ENSMUSG00000021767.20	ENSMUST00000238837.2	6165	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	47.5975723003694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCTGGCAGCCCACCCA	5985	False	NA	NA	False	NA	NA	NA	21566942	21720941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675830_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUST00000238839.2	chr12	-	5430	22	FSM	ENSMUSG00000020593.17	ENSMUST00000238839.2	5430	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	44.2933941113657	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGGCATATGAACTTTAAA	NA	False	NA	-22	True	AATAAA	-27	NA	16696967	16585954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16662553_16662611_16696837
ENSMUST00000238890.2	chr2	+	4691	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	64.7446909020346	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	NA	False	NA	18	True	AATAAA	-22	NA	90575713	90611365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ENSMUST00000238899.2	chr2	+	5767	24	FSM	ENSMUSG00000039844.21	ENSMUST00000238899.2	4205	24	-174	-1388	-174	0	multi-exon	FALSE	canonical	2	7	junction_1	80.1360138660296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29533652	29630375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_29533927_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ENSMUST00000238930.2	chr9	-	862	4	FSM	ENSMUSG00000040883.19	ENSMUST00000238930.2	862	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	87.3473271231327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCCATGGTCATTTTT	NA	False	NA	-7	True	AATAAA	-12	NA	21838831	21832305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838582
ENSMUST00000238932.2	chr9	-	2220	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_2	34.4551882885582	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708689	36690454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ENSMUST00000238938.2	chr12	-	348	1	FSM	ENSMUSG00000118552.2	ENSMUST00000238938.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	NA	False	NA	-80	True	NA	NA	NA	75678092	75677744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_75677700_75678100
ENSMUST00000238953.2	chr10	-	3204	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTTTTCTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-29	NA	40178182	40163453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUST00000238969.2	chr10	-	3206	8	FSM	ENSMUSG00000075232.7	ENSMUST00000238969.2	3206	8	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_3	48.542848734549	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTTTTCTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-29	NA	40178184	40163453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUST00000238976.3	chr19	+	953	5	FSM	ENSMUSG00000067889.8	ENSMUST00000238976.3	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.53834841531101	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAAGGCGGAGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	4771106	4776248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_4771561_4774107_4774260_4774657_4774832_4775928_4776021_4776167
ENSMUST00000238981.2	chr7	-	2060	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	230.503903625897	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTAGAAAGCTATTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	89630184	89603861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUST00000238984.2	chr9	+	3433	20	FSM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	False	NA	17	True	AATAAA	-18	NA	123358946	123421663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUST00000238988.2	chr9	+	3353	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_15	40.0713718725726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGGATTGCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	121126577	121302065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ENSMUST00000238988.2-0	chr9	+	5250	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	22	-1919	0	0	multi-exon	FALSE	canonical	3	114	junction_15	40.0713718725726	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTGTCTTTTTTTAGT	NA	False	NA	11	True	AATAAA	-19	NA	121126599	121303984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ENSMUST00000238995.2	chr13	-	2962	9	FSM	ENSMUSG00000038042.12	ENSMUST00000238995.2	2962	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	6.15934249737746	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTTGAAGCCT	NA	False	NA	NA	False	AATACA	-15	NA	48746836	48732685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48746562
ENSMUST00000239002.2	chr7	-	1531	6	FSM	ENSMUSG00000047586.5	ENSMUST00000239002.2	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.92574776766556	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTCAGAGGCTGGTT	NA	False	NA	NA	False	AATAAA	-25	NA	28246679	28243020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_28243698_28243846_28243986_28244663_28244760_28245580_28245633_28245714_28245778_28246175
ENSMUST00000239003.2	chr15	-	4587	12	FSM	ENSMUSG00000033697.17	ENSMUST00000239003.2	4587	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	14.9749101461177	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8169	False	NA	-4	True	AATAAA	-17	NA	76702370	76608184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76614563_76614657_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ENSMUST00000239007.2	chr11	-	561	4	FSM	ENSMUSG00000049154.13	ENSMUST00000239007.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAGACTATGTCACAGA	NA	False	NA	NA	False	AATAAA	-21	NA	58692786	58683628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_58683826_58687380_58687485_58689461_58689522_58692586
ENSMUST00000239015.2	chr7	-	1855	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	150.719386056782	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTTCTTGGTTCATTC	NA	False	NA	27	True	NA	NA	NA	44145937	44139361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUST00000239016.2	chr11	-	1849	8	FSM	ENSMUSG00000042709.16	ENSMUST00000239016.2	1849	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	36.2902134443535	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307925	60291463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUST00000239021.2	chr9	-	2104	11	FSM	ENSMUSG00000062762.18	ENSMUST00000239021.2	2104	11	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_10	155.462664328127	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708364	36690454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708299
ENSMUST00000239023.2	chr7	+	558	2	FSM	ENSMUSG00000118553.2	ENSMUST00000239023.2	558	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCTGAAGAGCATCCAGT	NA	False	NA	NA	False	NA	NA	NA	43077109	43078256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43077145_43077733
ENSMUST00000239030.2	chr4	+	2160	9	FSM	ENSMUSG00000028710.19	ENSMUST00000239030.2	2160	9	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	26.518566609076	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCACACCCCCACACAC	NA	False	NA	NA	False	NA	NA	NA	115642180	115669511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ENSMUST00000239049.2	chr19	-	2113	8	FSM	ENSMUSG00000025221.17	ENSMUST00000239049.2	2113	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	8.44671171376828	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTCTCTGCCTCTTTAT	NA	False	NA	0	True	AATAAA	-21	NA	45792013	45780784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45791814
ENSMUST00000239062.2	chr6	-	3641	12	FSM	ENSMUSG00000040029.16	ENSMUST00000239062.2	3641	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	62.5899683034862	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAACTCTGTCTGCTC	NA	False	NA	-9	True	AATAAA	-19	NA	148701330	148672188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_148674305_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224
ENSMUST00000239073.2	chr11	-	1958	9	FSM	ENSMUSG00000020321.17	ENSMUST00000239073.2	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_4	96.8522553944925	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTGTTTGCCTATACC	NA	False	NA	NA	False	ATTAAA	-5	NA	21521934	21506691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUST00000239075.2	chr2	+	1163	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	46.4239970273995	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTGTCAATGGGGGAA	172	False	NA	12	True	AATAAA	-12	NA	26476641	26482693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ENSMUST00000239076.2	chr3	+	1545	10	FSM	ENSMUSG00000118504.2	ENSMUST00000239076.2	1545	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	192.823529633307	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATTTGGGCTGGCAGG	NA	False	NA	7	True	AATAAA	-16	NA	89960210	89973179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969240_89970515_89970557_89971731_89971862_89972816
ENSMUST00000239083.2	chr9	+	3558	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	24.7475900502736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGTTGGTACTGTTTCT	NA	False	NA	19	True	AATAAA	-20	NA	123358823	123421665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUST00000239091.2	chr11	-	7897	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_30	12.8998277335612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	5075	False	NA	NA	False	AATAAA	-24	NA	8574887	8381651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ENSMUST00000239099.2	chr14	-	880	5	FSM	ENSMUSG00000021951.8	ENSMUST00000239099.2	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	52.3115665986023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTCATGAGGTTGAGA	NA	False	NA	-8	True	AATAAA	-20	NA	57809069	57787053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
ENSMUST00000239111.2	chr11	-	7629	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239111.2	7629	31	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_30	11.9341247409826	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	10003	False	NA	NA	False	AATAAA	-24	NA	8614681	8381651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ENSMUST00000239113.2	chrX	-	3015	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	18.580904176062	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAATTTCAAATA	NA	False	NA	NA	False	NA	NA	NA	133501754	133488934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ENSMUST00000239114.2	chr15	-	4366	14	FSM	ENSMUSG00000042292.19	ENSMUST00000239114.2	4366	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	7.74138192332869	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTGTATTTGATCCAT	NA	False	NA	-3	True	AATAAA	-21	NA	81074958	80896481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
ENSMUST00000239115.2	chr11	-	1823	9	FSM	ENSMUSG00000025162.19	ENSMUST00000239115.2	1823	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	191.835052844885	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGCTATACTTCAGCT	776	False	NA	NA	False	AATAAA	-45	NA	120882156	120849815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120850122_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUST00000239119.2	chr8	-	3930	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	13.2583982428852	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCCCCCCCCTTTAAAT	NA	False	NA	-2	True	AATAAA	-15	NA	36716670	36683217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ENSMUST00000239124.2	chr6	-	1008	2	FSM	ENSMUSG00000057103.12	ENSMUST00000239124.2	1008	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTAATGCATGTGATG	9874	False	NA	NA	False	NA	NA	NA	85892659	85887138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_85888003_85892515
ENSMUST00000239125.2	chr2	+	3608	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	13.7346277707115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCTTCTCAACATGTTA	4741	False	NA	NA	False	AAGAAA	-15	NA	15060133	15083977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ENSMUST00000239134.2	chr15	-	4494	11	FSM	ENSMUSG00000033697.17	ENSMUST00000239134.2	4494	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	15.2761251631426	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATTGTGTTTCTTTCAG	8169	False	NA	-4	True	AATAAA	-17	NA	76702370	76608184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ENSMUST00000239159.2	chr10	+	7324	16	FSM	ENSMUSG00000040624.19	ENSMUST00000239159.2	4478	16	0	-2846	0	0	multi-exon	FALSE	canonical	3	8	junction_1	7.74137512906389	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTTTCATTGAATTAA	NA	False	NA	NA	False	AATAAA	-17	NA	3784878	3917298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_3785077_3822926_3823442_3853556_3853658_3869135_3869206_3880206_3880254_3883596_3883748_3887849_3887982_3890168_3890352_3890437_3890534_3890633_3890727_3895890_3895925_3897519_3897604_3899666_3899706_3902310_3902334_3906545_3908206_3913400
ENSMUST00000239168.2	chr11	+	7131	18	FSM	ENSMUSG00000037533.21	ENSMUST00000239168.2	7131	18	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_17	8.41032484591653	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	364	False	NA	13	True	AATAAA	-14	NA	54517164	54590111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ENSMUST00000239169.2	chr2	+	4652	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	11.5134703716994	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTAAAGACTTATTTC	5060	False	NA	7	True	NA	NA	NA	91033256	91044442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUST00000239217.2	chr7	+	1157	7	FSM	ENSMUSG00000025511.16	ENSMUST00000239217.2	1157	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	25.1241362482817	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCACAGCCTCTGCTTCT	654	False	NA	NA	False	NA	NA	NA	141061976	141072866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUST00000239239.2	chr4	-	5188	26	FSM	ENSMUSG00000003810.14	ENSMUST00000239239.2	5188	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	71.9662587606164	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGCCTGTGTTTGCTTC	NA	False	NA	-2	True	AATACA	-16	NA	116228929	116163958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116228673
ENSMUST00000239240.2	chr19	+	1988	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	14.1918990977247	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCGGTTGTCACATTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	34169628	34217733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUST00000239246.2	chr13	-	2642	5	FSM	ENSMUSG00000055313.16	ENSMUST00000239246.2	2642	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.20156211871642	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTTCCTCACTTTCAG	NA	False	NA	NA	False	ATTAAA	-13	NA	21625214	21606021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21607795_21612437_21612549_21617560_21617713_21618520_21618842_21624929
ENSMUST00000239257.2	chr2	-	3393	31	FSM	ENSMUSG00000040479.13	ENSMUST00000239257.2	3393	31	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_30	54.3341104238908	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	False	NA	-5	True	AGTAAA	-16	NA	91795945	91763170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91795764
ENSMUST00000239281.2	chr11	+	857	6	FSM	ENSMUSG00000020812.19	ENSMUST00000239281.2	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	61.1901952930369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTAGCATTGTGGGTATA	NA	False	NA	4	True	AATAAA	-17	NA	116562513	116566625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_116562583_116562989_116563182_116563489_116563565_116564763_116564898_116565125_116565202_116566314
ENSMUST00000239288.2	chr2	-	1233	12	FSM	ENSMUSG00000027406.14	ENSMUST00000239288.2	1233	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	222.733469301557	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTATCTGGTTTTGTG	NA	False	NA	NA	False	AATAAA	-11	NA	130126381	130121236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_130121358_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUST00000239292.2	chr7	-	3966	18	FSM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	31.7309188501163	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCCGTTTGTCCTTTC	NA	False	NA	NA	False	AATGAA	-14	NA	19192746	19158699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ENSMUST00000239365.2	chr9	-	809	6	FSM	ENSMUSG00000097195.11	ENSMUST00000239365.2	809	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	430.698688180032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404970	88403104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
ENSMUST00000239369.2	chr9	-	1005	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	671	2	0	0	multi-exon	FALSE	canonical	3	405	junction_2	300.420122495148	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536
ENSMUST00000239373.2	chr10	+	5956	3	FSM	ENSMUSG00000038587.11	ENSMUST00000239373.2	5956	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	774.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTGTTTTTTTATTAA	NA	False	NA	23	True	AATAAA	-19	NA	4284544	4309470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_4284710_4303141_4307940_4308477
ENSMUST00000239389.2	chr11	-	1399	13	FSM	ENSMUSG00000014195.17	ENSMUST00000239389.2	1399	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_12	702.16860016349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGCCAACTACTTAAAA	5943	False	NA	NA	False	NA	NA	NA	100510433	100473924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100510353
ENSMUST00000239391.2	chr11	-	2248	10	FSM	ENSMUSG00000014195.17	ENSMUST00000239391.2	2248	10	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	226.197444615578	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAATGTTTTGACCGT	6247	False	NA	28	True	ATTAAA	-10	NA	100487974	100473664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991
ENSMUST00000239395.2	chr6	-	1304	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239395.2	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453683	142435974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ENSMUST00000239397.2	chr6	-	1287	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_1	65.6636450839754	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTCTGCCTGCCTTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	142453669	142435977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ENSMUST00000239398.2	chr2	-	3565	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_25	70.0256410181299	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTGAGTAATAGTTGAAA	NA	False	NA	NA	False	AATATA	-37	NA	53081199	53028486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ENSMUST00000239401.2	chr10	+	1101	2	FSM	ENSMUSG00000020308.8	ENSMUST00000239401.2	1101	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTTGCTGGTCACCT	8006	False	NA	10	True	AATAAA	-12	NA	79505243	79511960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_79505618_79511233
ENSMUST00000239402.2	chr12	+	2125	13	FSM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_6	180.731134715509	1966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTCTGTGATTATCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	17316595	17334771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUST00000239403.2	chr14	+	2406	7	FSM	ENSMUSG00000040997.15	ENSMUST00000239403.2	2406	7	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	38.1200588783502	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTGTTTAATATTGAT	NA	False	NA	16	True	AATAAA	-23	NA	54496688	54506626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUST00000239405.2	chr9	+	3680	12	FSM	ENSMUSG00000041064.15	ENSMUST00000239405.2	3680	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	26.5476337835245	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTCCTGCCT	NA	False	NA	22	True	AATAAA	-12	NA	65494486	65503244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ENSMUST00000239407.2	chr11	+	6051	31	FSM	ENSMUSG00000032740.18	ENSMUST00000239407.2	6051	31	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_26	14.1107130302555	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACTGCATAGTATGTT	NA	False	NA	NA	False	NA	NA	NA	29324347	29454805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
ENSMUST00000239417.2	chr9	-	1242	4	FSM	ENSMUSG00000032062.4	ENSMUST00000239417.2	1242	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGATTGATTGTTCCTG	2131	False	NA	NA	False	AATAAA	-17	NA	50657821	50650990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
ENSMUST00000239418.2	chr11	-	1560	14	FSM	ENSMUSG00000014195.17	ENSMUST00000239418.2	1560	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	947.272721800568	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGGGCTTCAGCTTTGAA	5912	False	NA	NA	False	NA	NA	NA	100510464	100474440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUST00000239430.2	chr17	-	1442	9	FSM	ENSMUSG00000023919.10	ENSMUST00000087114.5	1942	9	496	4	496	-4	multi-exon	FALSE	canonical	3	128	junction_2	14.1283181943216	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGATGTGTGAGTAG	NA	False	NA	-5	True	AATAAA	-23	NA	41245442	41233945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUST00000239432.2	chr6	-	1601	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	0	0	0	0	multi-exon	FALSE	canonical	3	1828	junction_3	39.1652482012647	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAACCTCTTTGTCCCAG	NA	False	NA	-23	True	AATACA	-16	NA	124791259	124787554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUST00000239433.2	chr9	+	846	4	FSM	ENSMUSG00000086228.4	ENSMUST00000239433.2	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	5.79271573232759	796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTGCAGAGGCAGGAGG	NA	False	NA	33	True	NA	NA	NA	65279127	65285331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_65279411_65281031_65281242_65284190_65284293_65285080
ENSMUST00000239441.2	chrX	-	2648	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	11.0018180315801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATTTCTCTATTTC	NA	False	NA	-7	True	NA	NA	NA	8042420	8020710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ENSMUST00000239445.2	chrX	-	1508	8	FSM	ENSMUSG00000019088.15	ENSMUST00000239445.2	1508	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.73619909446343	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTATGCTTAATTCAAT	NA	False	NA	NA	False	AATAAA	-17	NA	73325939	73316822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325840
ENSMUST00000239447.2	chr2	+	4361	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	19.1852443299532	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGTGTTCGTCATTGG	NA	False	NA	30	True	AATAAA	-23	NA	32178264	32197933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUST00000239450.2	chr14	+	2677	17	FSM	ENSMUSG00000021975.10	ENSMUST00000239450.2	2677	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_12	28.2795752266543	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTTCTATTGCACTACA	NA	False	NA	20	True	AATAAA	-20	NA	65187493	65277284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUST00000239451.2	chr1	-	5894	33	FSM	ENSMUSG00000055322.17	ENSMUST00000239451.2	5894	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	18.7540620599912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAATCGGGAGCCCTCGC	NA	False	NA	NA	False	NA	NA	NA	74137835	73953688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034532_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74137380
ENSMUST00000239453.2	chr11	-	1412	10	FSM	ENSMUSG00000014195.17	ENSMUST00000239453.2	1412	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	834.05608657665	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAATAAAATGTTTT	8483	False	NA	22	True	ATTAAA	-4	NA	100485738	100473670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100485585
ENSMUST00000239459.2	chr9	+	2591	4	FSM	ENSMUSG00000042138.10	ENSMUST00000239459.2	2591	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	97	False	NA	NA	False	TTTAAA	-7	NA	37400316	37435446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
ENSMUST00000239461.2	chr4	-	4883	21	FSM	ENSMUSG00000066151.13	ENSMUST00000239461.2	4883	21	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_17	18.5835276521978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGGTCTTTTGTCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	62256732	62219446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722
ENSMUST00000239462.2	chr9	-	3112	28	FSM	ENSMUSG00000032422.19	ENSMUST00000239462.2	3112	28	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_13	28.9754164757839	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATTTACTGTCTTGA	NA	False	NA	1	True	AATAAA	-43	NA	88321004	88258799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUST00000239463.2	chr9	+	2289	4	FSM	ENSMUSG00000042138.10	ENSMUST00000239463.2	2289	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	92.182186758373	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	397	False	NA	NA	False	TTTAAA	-5	NA	37400616	37435444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37401130_37428512_37428769_37430022_37430084_37433985
ENSMUST00000239468.2	chr8	-	5308	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	8.84180495107755	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCTGTTGTTCAGAAT	NA	False	NA	-1	True	ATTAAA	-19	NA	106553982	106494939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ENSMUST00000239472.2	chr9	+	988	1	FSM	ENSMUSG00000118653.2	ENSMUST00000239472.2	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAACATATGGT	NA	False	NA	NA	False	AATAAA	-33	NA	56344740	56345728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_56344700_56345700
ENSMUST00000239473.2	chr5	+	1813	7	FSM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	59.7847992571876	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112424572	112463221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUST00000239479.2	chr11	-	2235	4	FSM	ENSMUSG00000014195.17	ENSMUST00000239479.2	2235	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1369.13330249468	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGTGTCCTACCCTAT	5923	False	NA	NA	False	NA	NA	NA	100510453	100487611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100489555_100490032_100490136_100492553_100492643_100510353
ENSMUST00000239486.2	chr9	+	3689	18	FSM	ENSMUSG00000032125.22	ENSMUST00000239486.2	3689	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.08465228909328	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGTGACATCATTCCT	NA	False	NA	NA	False	TATAAA	-13	NA	37313341	37325318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_37313448_37313850_37314184_37314447_37314606_37314738_37314860_37315369_37315498_37315588_37315818_37316066_37316180_37316868_37317038_37317193_37317380_37317484_37317528_37319233_37319371_37319468_37319733_37321677_37321786_37321995_37322135_37322275_37322519_37322640_37323000_37324324_37324532_37324672
ENSMUST00000239496.2	chr12	+	5778	33	FSM	ENSMUSG00000002900.18	ENSMUST00000239496.2	5778	33	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_13	20.6626313894794	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATCCTATGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	31315292	31379638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ENSMUST00000239497.2	chr5	+	1775	13	FSM	ENSMUSG00000028932.9	ENSMUST00000239497.2	1775	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	502.901056095752	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTGTGTCAGTGCTTC	NA	False	NA	11	True	AATAAA	-7	NA	21990280	22008775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_21990516_21991647_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUST00000239499.2	chr11	-	1771	14	FSM	ENSMUSG00000014195.17	ENSMUST00000239499.2	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	720.895014063612	2776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5919	False	NA	-21	True	AATAAA	-15	NA	100510457	100473643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490032_100490136_100492553_100492643_100510353
ENSMUST00000239501.2	chr5	+	2735	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_8	6.97499240366195	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGATGGTGGTGATGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	124736811	124765803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
ENSMUST00000239506.1	chr2	+	2347	8	FSM	ENSMUSG00000118663.1	ENSMUST00000239506.1	2347	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.6954231805876	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAAGGGAGAGGTC	NA	False	NA	NA	False	NA	NA	NA	122461119	122474750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122471036_122471230_122472613_122472745_122473758_122473885_122474529
ENSMUST00000239508.1	chr8	+	1535	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	0	1212	0	0	multi-exon	FALSE	canonical	3	137	junction_1	15.2153269054433	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTTTTAGAATTGTGT	NA	False	NA	29	True	AATAAA	-19	NA	39472998	39618155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUST00000239512.1	chr5	-	4451	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_11	17.2980409937722	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTGCATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	100648493	100589899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ENSMUST00000239513.1	chr5	-	4587	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239513.1	4587	13	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_12	54.8246573683371	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAAGTTTTGCATTT	NA	False	NA	NA	False	AATAAA	-33	NA	100646432	100589900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100646161
ENSMUST00000239514.1	chr5	-	3865	14	FSM	ENSMUSG00000118665.1	ENSMUST00000239514.1	3865	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	87.0679527861248	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGGAGGGTTTGGTCT	NA	False	NA	NA	False	ATTAAA	-20	NA	100646432	100590058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100617683_100617783_100623547_100623691_100628056_100628181_100633661_100633715_100646161
ENSMUST00000239522.1	chr13	-	1567	4	FSM	ENSMUSG00000118666.1	ENSMUST00000239522.1	1567	4	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCAGTGTTGTAAAGCA	9194	False	NA	NA	False	NA	NA	NA	66431965	66428949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_66429747_66429830_66430407_66431570_66431632_66431832
ENSMUST00000239527.1	chr19	-	3140	17	FSM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	8.80961832317383	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGATCTGTGGTTTGTG	NA	False	NA	-6	True	AATAAA	-18	NA	6818004	6806577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
ENSMUST00000239533.1	chr16	+	4698	19	FSM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	90.4391378459624	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTGACTCATTCTTAAG	NA	False	NA	23	True	NA	NA	NA	18166045	18225826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ENSMUST00000239537.1	chr16	+	1604	4	FSM	ENSMUSG00000118669.2	ENSMUST00000239537.1	1604	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	37.8505834389203	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTATAGTTTTTCCTTGTT	NA	False	NA	NA	False	GATAAA	-20	NA	18210447	18217361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576
ENSMUST00000239538.1	chr16	+	3829	16	FSM	ENSMUSG00000118669.2	ENSMUST00000239538.1	3829	16	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_7	31.2985622672991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGAAGAAAACTGACAA	NA	False	NA	-32	True	NA	NA	NA	18210453	18225006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851
ENSMUST00000239547.1	chr16	+	4232	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_7	30.582815333942	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTTTGTGACTCATTC	NA	False	NA	18	True	NA	NA	NA	18210480	18225821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ENSMUST00000239562.1	chr9	+	2659	21	FSM	ENSMUSG00000023259.18	ENSMUST00000239562.1	2659	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	9.81121806912883	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGCTGTGGCATGGTC	NA	False	NA	19	True	AATAAA	-19	NA	108731895	108742117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_108732034_108732975_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738590_108739280_108739458_108739626_108739682_108741477_108741615_108741836
ENSMUST00000240377.1	chr17	+	1849	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGAGACTGTGGAGGAGC	NA	False	NA	-20	True	NA	NA	NA	40157243	40159092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_40157200_40159100
ENSMUST00020181660.1	chr18	+	143	1	FSM	ENSMUSG00002074846.1	ENSMUST00020181660.1	143	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCTGCGAATCCGCGGAA	4756	False	NA	NA	False	NA	NA	NA	36934918	36935061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_36934900_36935100
ENSMUST00020181674.1	chr17	-	108	1	FSM	ENSMUSG00002075261.1	ENSMUST00020181674.1	108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTACAAACTATGTT	NA	False	NA	NA	False	NA	NA	NA	71813538	71813430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_71813400_71813500
ENSMUST00020181851.1	chr19	-	78	1	FSM	ENSMUSG00002075338.1	ENSMUST00020181851.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATTTTCCTCGTCTCGC	1146	False	NA	NA	False	NA	NA	NA	37126562	37126484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_37126500_37126600
ENSMUST00020182009.1	chr9	-	57	1	FSM	ENSMUSG00002075524.1	ENSMUST00020182009.1	57	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGGGGGCCGCCCTCTC	8329	False	NA	NA	False	NA	NA	NA	56131055	56130998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_56131000_56131100
ENSMUST00020182049.1	chr10	-	133	1	FSM	ENSMUSG00002076916.1	ENSMUST00020182049.1	133	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTCGGTGAGTGACCG	NA	False	NA	NA	False	NA	NA	NA	86541312	86541179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_86541200_86541300
ENSMUST00020182523.1	chr1	+	53	1	FSM	ENSMUSG00002074851.1	ENSMUST00020182523.1	53	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCGGTGGCGGTTGTCCCG	NA	False	NA	NA	False	NA	NA	NA	82817166	82817219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_82817200_82817200
ENSMUST00020182542.1	chr4	+	57	1	FSM	ENSMUSG00002075188.1	ENSMUST00020182542.1	57	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGGGGGCCGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	139065614	139065671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_139065600_139065700
ENSMUST00020182737.1	chr19	-	132	1	FSM	ENSMUSG00002075991.1	ENSMUST00020182737.1	132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTAGAAATATTTGTAT	10015	False	NA	NA	False	AATATA	-30	NA	60762899	60762767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_60762800_60762900
ENSMUST00020182858.1	chr13	-	57	1	FSM	ENSMUSG00002075551.1	ENSMUST00020182858.1	57	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGGGGGCCGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	9884561	9884504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9884500_9884600
ENSMUST00020182870.1	chr12	-	136	1	FSM	ENSMUSG00002076596.1	ENSMUST00020182870.1	136	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCATCTGCTCAGTTC	NA	False	NA	NA	False	NA	NA	NA	87484587	87484451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87484500_87484600
ENSMUST00020182955.1	chr4	+	101	1	FSM	ENSMUSG00002075369.1	ENSMUST00020182955.1	101	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGCAGTGGTATCGAA	NA	False	NA	NA	False	NA	NA	NA	135311058	135311159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_135311100_135311200
ENSMUST00020183013.1	chr11	-	117	1	FSM	ENSMUSG00002075061.1	ENSMUST00020183013.1	117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACATAATACAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	23576861	23576744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_23576700_23576900
ENSMUST00020183187.1	chr5	+	74	1	FSM	ENSMUSG00002076301.1	ENSMUST00020183187.1	74	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACAAGAAAAACGGACAAA	300	False	NA	NA	False	AAAACA	-17	NA	100569826	100569900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100569800_100569900
ENSMUST00020183322.1	chr16	+	57	1	FSM	ENSMUSG00002076173.1	ENSMUST00020183322.1	57	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGGGGGCCGCCCTCTC	1128	False	NA	NA	False	NA	NA	NA	10961988	10962045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_10962000_10962000
ENSMUST00020183325.1	chr4	-	2830	11	FSM	ENSMUSG00002076083.1	ENSMUST00020183325.1	2830	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	26.227657158046	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGCCTGAGGCTGAATGT	8305	False	NA	-22	True	AATAAA	-18	NA	156319257	156313813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_156315144_156315357_156315462_156315560_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317203_156317747_156317903_156318048_156318171_156318259_156318520_156319112
ENSMUST00020183344.1	chr19	-	56	1	FSM	ENSMUSG00002074969.1	ENSMUST00020183344.1	56	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTCCTTCCTGCTCTGG	538	False	NA	NA	False	NA	NA	NA	5874735	5874679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5874700_5874700
ENSMUST00020183529.1	chr12	-	91	1	FSM	ENSMUSG00002076190.1	ENSMUST00020183529.1	91	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCGCGGCGGAGCGCTCCC	9961	False	NA	NA	False	NA	NA	NA	55867938	55867847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55867800_55867900
ENSMUST00020183735.1	chr5	+	144	1	FSM	ENSMUSG00002076272.1	ENSMUST00020183735.1	144	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	6090	False	NA	NA	False	NA	NA	NA	92577643	92577787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_92577600_92577800
ENSMUST00020183780.1	chr7	+	120	1	FSM	ENSMUSG00002074947.1	ENSMUST00020183780.1	120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTCAGTGTCCCTTCTA	NA	False	NA	NA	False	NA	NA	NA	109120455	109120575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_109120500_109120600
m54284U_201001_173734/100271549/ccs	chr12	+	168	1	Intergenic	novelGene_6909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	111244379	111244547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111244400_111244500
m54284U_201001_173734/100729540/ccs	chr9	+	2226	1	FSM	ENSMUSG00000096647.3	ENSMUST00000178436.3	871	1	-54	-1301	-54	1301	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATTATTTTCA	NA	False	NA	NA	False	AATACA	-17	NA	90000935	90003161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_90000900_90003200
m54284U_201001_173734/100729585/ccs	chr9	+	173	1	Intergenic	novelGene_4749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	47435938	47436111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_47435900_47436100
m54284U_201001_173734/100860297/ccs	chr4	-	187	1	Intergenic	novelGene_2239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGTGGAGCACTACTGA	NA	False	NA	NA	False	NA	NA	NA	134649621	134649434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_134649400_134649600
m54284U_201001_173734/100993352/ccs	chr17	+	169	1	Intergenic	novelGene_8475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATCAATCAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29212935	29213104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29212900_29213100
m54284U_201001_173734/101320056/ccs	chr2	+	206	1	Intergenic	novelGene_763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCATTTGAACATG	NA	False	NA	NA	False	NA	NA	NA	35520941	35521147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_35520900_35521100
m54284U_201001_173734/101713617/ccs	chr10	+	180	1	Intergenic	novelGene_5216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGGAAGTTCTTGGG	NA	False	NA	NA	False	NA	NA	NA	20006191	20006371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_20006200_20006400
m54284U_201001_173734/102172980/ccs	chr8	-	109	1	FSM	ENSMUSG00000119145.1	ENSMUST00000239699.1	107	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGTTCCACCATCCA	NA	False	NA	NA	False	NA	NA	NA	7478328	7478219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_7478200_7478300
m54284U_201001_173734/102237983/ccs	chr2	+	193	1	Intergenic	novelGene_629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACAGCTCTTAGCA	NA	False	NA	NA	False	NA	NA	NA	24805395	24805588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_24805400_24805600
m54284U_201001_173734/102302241/ccs	chr16	+	2508	1	NIC	ENSMUSG00000051483.10	novel	2143	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAAATGTTTTTAAGTT	NA	False	NA	15	True	AATAAA	-27	NA	93404724	93407232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_93404700_93407200
m54284U_201001_173734/102957662/ccs	chr1	+	1406	1	Intergenic	novelGene_300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	131447041	131448447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_131447000_131448400
m54284U_201001_173734/103285467/ccs	chr3	+	2130	1	Genic_Genomic	ENSMUSG00000075700.11	novel	NA	NA	NA	NA	14591	285	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAAGTTTTCCTGAGAA	NA	False	NA	NA	False	CATAAA	-21	NA	58498709	58500839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr3_+_58498700_58500800
m54284U_201001_173734/103350616/ccs	chr10	+	188	1	Intergenic	novelGene_5242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTAACTTTTTATGAAA	NA	False	NA	NA	False	NA	NA	NA	30034798	30034986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_30034800_30035000
m54284U_201001_173734/103417137/ccs	chr14	+	180	1	Antisense	novelGene_ENSMUSG00000115294.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGGATTTCATGAGTCC	NA	False	NA	NA	False	NA	NA	NA	44429297	44429477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_44429300_44429500
m54284U_201001_173734/103743762/ccs	chr7	+	2252	1	FSM	ENSMUSG00000098132.2	ENSMUST00000182858.2	3496	1	0	1244	0	-1244	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGACTGTTTACAT	NA	False	NA	NA	False	GATAAA	-14	NA	112553168	112555420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_112553200_112555400
m54284U_201001_173734/103875096/ccs	chr9	+	177	1	Intergenic	novelGene_4922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGATAACTAAT	NA	False	NA	NA	False	NA	NA	NA	72101973	72102150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72102000_72102200
m54284U_201001_173734/104006689/ccs	chr18	+	177	1	Intergenic	novelGene_8997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATAACGTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	66632622	66632799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_66632600_66632800
m54284U_201001_173734/104136802/ccs	chr17	-	176	1	Intergenic	novelGene_8422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTCAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	25349352	25349176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_25349200_25349400
m54284U_201001_173734/104597520/ccs	chr11	+	382	1	Intergenic	novelGene_6484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACCATTTTCTCAATTT	NA	False	NA	NA	False	NA	NA	NA	116800589	116800971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_116800600_116801000
m54284U_201001_173734/104661819/ccs	chr12	+	161	1	Intergenic	novelGene_6595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	5582	False	NA	NA	False	NA	NA	NA	24837202	24837363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_24837200_24837400
m54284U_201001_173734/104661853/ccs	chr16	-	1466	1	Genic_Genomic	ENSMUSG00000097768.3	novel	NA	NA	NA	NA	2164	864	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACATAAGCAGCCTGAG	8735	False	NA	NA	False	NA	NA	NA	93589625	93588159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_-_93588200_93589600
m54284U_201001_173734/104792652/ccs	chr14	+	176	1	Intergenic	novelGene_7360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAATTGGGATTT	NA	False	NA	NA	False	NA	NA	NA	25811938	25812114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_25811900_25812100
m54284U_201001_173734/10487042/ccs	chr16	-	173	1	Intergenic	novelGene_8250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAACCCTACAATG	NA	False	NA	NA	False	NA	NA	NA	37479449	37479276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_37479300_37479400
m54284U_201001_173734/104989867/ccs	chr16	+	192	1	Intergenic	novelGene_8221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCACTTGTCATCTGAC	NA	False	NA	NA	False	NA	NA	NA	32845720	32845912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_32845700_32845900
m54284U_201001_173734/105056994/ccs	chr5	+	217	1	Intergenic	novelGene_3071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATGTGTTTATCGG	NA	False	NA	NA	False	AATAAA	-3	NA	146829174	146829391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_146829200_146829400
m54284U_201001_173734/105251847/ccs	chr3	-	3165	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	0	1317	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	54.6671747943864	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAGCTTAAATCTGTGG	7078	False	NA	NA	False	AATAAA	-19	NA	142101379	141947123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983760_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
m54284U_201001_173734/105908258/ccs	chr10	+	190	1	Intergenic	novelGene_5621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAGGGAAGAAAAAAGA	2520	False	NA	NA	False	NA	NA	NA	128054825	128055015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128054800_128055000
m54284U_201001_173734/106037341/ccs	chr10	+	168	1	Intergenic	novelGene_5583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	121327733	121327901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_121327700_121327900
m54284U_201001_173734/106038469/ccs	chr2	-	171	1	Intergenic	novelGene_1046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGATAAATTAAACCGACAC	8606	False	NA	NA	False	NA	NA	NA	125715414	125715243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_125715200_125715400
m54284U_201001_173734/10618293/ccs	chr11	+	191	1	Intergenic	novelGene_6055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGGCTGATCTTCCA	6831	False	NA	NA	False	NA	NA	NA	77809260	77809451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77809300_77809500
m54284U_201001_173734/10618929/ccs	chr16	+	2489	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_7	746.47263550351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321603_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
m54284U_201001_173734/10619208/ccs	chr11	-	109	1	FSM	ENSMUSG00000119807.1	ENSMUST00000240522.1	107	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	4274255	4274146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_4274100_4274300
m54284U_201001_173734/106497378/ccs	chr14	+	214	1	Intergenic	novelGene_7490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCTTGTGTTTTTAAC	NA	False	NA	NA	False	NA	NA	NA	57903595	57903809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_57903600_57903800
m54284U_201001_173734/106627793/ccs	chr2	+	190	1	Intergenic	novelGene_753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTCCATCTCTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	34639138	34639328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34639100_34639300
m54284U_201001_173734/106891109/ccs	chr13	+	3155	1	Intergenic	novelGene_7051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTCTGAGCAAGACCC	NA	False	NA	NA	False	NA	NA	NA	45125211	45128366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_45125200_45128400
m54284U_201001_173734/106955679/ccs	chr13	-	166	1	Intergenic	novelGene_7242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGTGTTTGGTGAA	NA	False	NA	NA	False	NA	NA	NA	94754366	94754200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_94754200_94754400
m54284U_201001_173734/107153356/ccs	chr17	-	186	1	Intergenic	novelGene_8454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGAAATCTGATTATG	NA	False	NA	NA	False	NA	NA	NA	28283184	28282998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_28283000_28283200
m54284U_201001_173734/107217776/ccs	chr5	+	184	1	Intergenic	novelGene_2645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGTGGGTTTTAATG	NA	False	NA	NA	False	NA	NA	NA	86298886	86299070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_86298900_86299100
m54284U_201001_173734/107284947/ccs	chr7	-	162	1	Intergenic	novelGene_3638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTGCGTCAGCT	NA	False	NA	-7	True	NA	NA	NA	6224825	6224663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_6224700_6224800
m54284U_201001_173734/107348042/ccs	chr18	+	199	1	Intergenic	novelGene_8952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTTTAAAACAGGGTT	5989	False	NA	NA	False	NA	NA	NA	47062051	47062250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_47062100_47062200
m54284U_201001_173734/10750092/ccs	chrX	-	171	1	Intergenic	novelGene_9410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTAAAAAGAGTCAT	NA	False	NA	NA	False	NA	NA	NA	21277523	21277352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_21277400_21277500
m54284U_201001_173734/107676694/ccs	chr2	-	177	1	Intergenic	novelGene_1247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTTAGAGAT	NA	False	NA	NA	False	NA	NA	NA	166911491	166911314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166911300_166911500
m54284U_201001_173734/108265660/ccs	chr8	+	196	1	Intergenic	novelGene_4358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGATCATGCCCATTAA	NA	False	NA	NA	False	NA	NA	NA	80363707	80363903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_80363700_80363900
m54284U_201001_173734/108331067/ccs	chr10	+	172	1	Intergenic	novelGene_5345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTTTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	62390831	62391003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62390800_62391000
m54284U_201001_173734/108594891/ccs	chr5	-	181	1	Intergenic	novelGene_2486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGTTTATATTCTATATA	5413	False	NA	NA	False	NA	NA	NA	24339166	24338985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_24339000_24339200
m54284U_201001_173734/108725452/ccs	chr11	-	194	1	Intergenic	novelGene_5967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGACATGGCTTGCAAG	5251	False	NA	NA	False	NA	NA	NA	70581907	70581713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_70581700_70581900
m54284U_201001_173734/108922094/ccs	chr5	+	191	1	Intergenic	novelGene_2888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCACACTTCAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	123749401	123749592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123749400_123749600
m54284U_201001_173734/108987899/ccs	chr6	+	190	1	Intergenic	novelGene_3211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAATTCTGACATTTTTA	9634	False	NA	NA	False	NA	NA	NA	38523576	38523766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38523600_38523800
m54284U_201001_173734/109053300/ccs	chr9	+	671	1	FSM	ENSMUSG00000074516.7	ENSMUST00000213318.2	480	1	-53	-138	-53	138	mono-exon	FALSE	NA	NA	NA	NA	NA	265	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAGTCCAGTCTCAGT	-3	True	NA	NA	False	AATAAA	-35	NA	7751672	7752343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_7751700_7752300
m54284U_201001_173734/109117628/ccs	chr3	-	854	1	Intergenic	novelGene_1720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAGTCTTTCATAACCT	NA	False	NA	NA	False	ATTAAA	-25	NA	153065693	153064839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_153064800_153065700
m54284U_201001_173734/109251071/ccs	chr11	+	195	1	Intergenic	novelGene_6139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTCACATAGAATAAGAAG	NA	False	NA	NA	False	NA	NA	NA	84988782	84988977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_84988800_84989000
m54284U_201001_173734/109314122/ccs	chr9	-	172	1	Intergenic	novelGene_4983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	84307303	84307131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_84307100_84307300
m54284U_201001_173734/109314897/ccs	chr17	-	326	1	Intergenic	novelGene_8610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACTTTTGAAAAA	8685	False	NA	NA	False	NA	NA	NA	46144845	46144519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_46144500_46144800
m54284U_201001_173734/109316802/ccs	chr18	+	5835	1	Genic_Genomic	ENSMUSG00000025423.17	novel	NA	NA	NA	NA	84054	1907	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGAGTCTGACATTGA	NA	False	NA	4	True	AATAAA	-15	NA	77237568	77243403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr18_+_77237600_77243400
m54284U_201001_173734/109447225/ccs	chr17	-	176	1	Intergenic	novelGene_8561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	35807369	35807193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35807200_35807400
m54284U_201001_173734/10947063/ccs	chr6	+	181	1	Intergenic	novelGene_3437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	5380	False	NA	NA	False	NA	NA	NA	116213870	116214051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_116213900_116214100
m54284U_201001_173734/109644606/ccs	chr7	+	2032	1	NIC	ENSMUSG00000078765.12	novel	884	8	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGTCTGTGGTTTCCTTC	NA	False	NA	32	True	AATAAA	-20	NA	30262754	30264786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_30262800_30264800
m54284U_201001_173734/109709871/ccs	chr12	+	188	1	Intergenic	novelGene_6902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGATAGCATGGCAAAG	NA	False	NA	NA	False	NA	NA	NA	110804525	110804713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_110804500_110804700
m54284U_201001_173734/109838459/ccs	chr10	-	192	1	Intergenic	novelGene_5516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAGAAAACGTTTC	NA	False	NA	NA	False	NA	NA	NA	95360248	95360056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_95360100_95360200
m54284U_201001_173734/109840415/ccs	chr5	+	171	1	Intergenic	novelGene_2913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGTATCGGCCTCGA	NA	False	NA	NA	False	NA	NA	NA	124994157	124994328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_124994200_124994300
m54284U_201001_173734/109840801/ccs	chr2	-	5159	3	NIC	ENSMUSG00000027566.16	novel	914	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3926	junction_1	312.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	-12	True	AATAAA	-17	NA	179684226	179678166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_179678367_179678730_179679981_179680517
m54284U_201001_173734/109971176/ccs	chr6	+	177	1	Intergenic	novelGene_3271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATTGAAACTTA	665	False	NA	NA	False	NA	NA	NA	51591444	51591621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_51591400_51591600
m54284U_201001_173734/11010577/ccs	chr8	+	260	1	Intergenic	novelGene_4430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105160217	105160477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_105160200_105160500
m54284U_201001_173734/11011815/ccs	chr10	-	158	1	Intergenic	novelGene_5283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43114977	43114819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_43114800_43115000
m54284U_201001_173734/110298708/ccs	chr11	-	221	1	Intergenic	novelGene_5713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAACTCTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	20001864	20001643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_20001600_20001900
m54284U_201001_173734/110430658/ccs	chr19	+	192	1	Intergenic	novelGene_9232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGCTACCATCTTTTA	NA	False	NA	NA	False	NA	NA	NA	36446782	36446974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_36446800_36447000
m54284U_201001_173734/110887610/ccs	chr4	+	205	1	Intergenic	novelGene_2443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACCCTAAAATTAGGAG	NA	False	NA	NA	False	NA	NA	NA	156372634	156372839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156372600_156372800
m54284U_201001_173734/110952614/ccs	chr14	+	182	1	Intergenic	novelGene_7412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAAAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	45454679	45454861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_45454700_45454900
m54284U_201001_173734/111281579/ccs	chr4	-	168	1	Intergenic	novelGene_2209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAGAAAAGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	132705842	132705674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_132705700_132705800
m54284U_201001_173734/111411577/ccs	chr4	+	1367	4	NNC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	177.125818432987	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3176	False	NA	16	True	AATAAA	-16	NA	129494472	129502321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_129494525_129494775_129494928_129500879_129500973_129501251
m54284U_201001_173734/111741770/ccs	chr10	-	198	1	Intergenic	novelGene_5432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTTGTTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	77850285	77850087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_77850100_77850300
m54284U_201001_173734/112199073/ccs	chr6	-	184	1	Intergenic	novelGene_3232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTGCCTTTAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	39742488	39742304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39742300_39742500
m54284U_201001_173734/112460064/ccs	chr11	-	216	1	Intergenic	novelGene_5759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGATTATCTTGATG	NA	False	NA	NA	False	AATAAA	-4	NA	29781974	29781758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_29781800_29782000
m54284U_201001_173734/112591555/ccs	chr19	-	1039	1	FSM	ENSMUSG00000095098.3	ENSMUST00000179549.3	4715	1	310	3366	-80	-3361	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGAAGCCTGGCCAGCTT	5251	False	NA	-7	True	AATAAA	-17	NA	5507612	5506573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5506600_5507600
m54284U_201001_173734/112658294/ccs	chr2	+	192	1	Intergenic	novelGene_737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGCTTCACAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	33479715	33479907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33479700_33479900
m54284U_201001_173734/112853165/ccs	chrX	+	195	1	Intergenic	novelGene_9497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTGAAAGA	NA	False	NA	NA	False	NA	NA	NA	72785811	72786006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_72785800_72786000
m54284U_201001_173734/113247878/ccs	chr13	-	192	1	Intergenic	novelGene_7106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCCCTACAGATATT	4160	False	NA	NA	False	NA	NA	NA	55566960	55566768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55566800_55567000
m54284U_201001_173734/113313899/ccs	chr5	+	171	1	FSM	ENSMUSG00000079659.6	ENSMUST00000200542.2	5254	1	3593	1490	3593	1416	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAACAAAAATACCAA	NA	False	NA	NA	False	NA	NA	NA	9209325	9209496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_9209300_9209500
m54284U_201001_173734/11339863/ccs	chr6	-	1340	4	NNC	ENSMUSG00000004268.12	novel	917	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	103	junction_1	552.775421547184	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689104	124681344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_124682175_124682477_124682620_124682703_124682806_124688838
m54284U_201001_173734/113443532/ccs	chr1	+	359	1	Intergenic	novelGene_407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATAATAAATCTTTTTTT	4865	False	NA	NA	False	NA	NA	NA	156370924	156371283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156370900_156371300
m54284U_201001_173734/113509116/ccs	chr9	-	187	1	Intergenic	novelGene_4715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTCCTTCTAAATATCACA	NA	False	NA	NA	False	NA	NA	NA	39783994	39783807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_39783800_39784000
m54284U_201001_173734/113705560/ccs	chr5	+	189	1	Intergenic	novelGene_3075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAGATTAGAACAGAAAT	9361	False	NA	NA	False	NA	NA	NA	147086926	147087115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_147086900_147087100
m54284U_201001_173734/114033366/ccs	chr15	-	185	1	Intergenic	novelGene_7621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAACGTACAAACAA	NA	False	NA	NA	False	AATAAA	-6	NA	8205367	8205182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_8205200_8205400
m54284U_201001_173734/11469500/ccs	chr12	+	4374	1	NIC	ENSMUSG00000033373.17	novel	2613	12	NA	NA	0	-2883	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	76884206	76888580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_76884200_76888600
m54284U_201001_173734/11470845/ccs	chrX	-	184	1	Intergenic	novelGene_9438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41008598	41008414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_41008400_41008600
m54284U_201001_173734/114756112/ccs	chr13	+	181	1	Intergenic	novelGene_6957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGGAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	9071963	9072144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_9072000_9072100
m54284U_201001_173734/114886612/ccs	chr12	-	179	1	Intergenic	novelGene_6570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAGAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	13026519	13026340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_13026300_13026500
m54284U_201001_173734/114951774/ccs	chr12	-	188	1	Intergenic	novelGene_6654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCTCTGAACAAC	8296	False	NA	NA	False	NA	NA	NA	55458072	55457884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_55457900_55458100
m54284U_201001_173734/115870097/ccs	chr11	+	1690	1	Antisense	novelGene_ENSMUSG00000051510.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGATCAAGTTTTCATT	NA	False	NA	NA	False	AGTAAA	-15	NA	120523517	120525207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_120523500_120525200
m54284U_201001_173734/115933834/ccs	chr4	+	224	1	Intergenic	novelGene_2238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATAAGGACATATGGAT	NA	False	NA	NA	False	NA	NA	NA	134614866	134615090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_134614900_134615100
m54284U_201001_173734/116327922/ccs	chr12	+	182	1	Intergenic	novelGene_6540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAGGCTGAGAAGATCAC	7100	False	NA	NA	False	NA	NA	NA	3967128	3967310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_3967100_3967300
m54284U_201001_173734/116457640/ccs	chr3	+	189	1	Intergenic	novelGene_1617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTTGCTTGTAATTT	NA	False	NA	NA	False	NA	NA	NA	104489068	104489257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_104489100_104489300
m54284U_201001_173734/116525353/ccs	chrX	-	174	1	Intergenic	novelGene_9409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGGAAAAAAAGAATAATC	NA	False	NA	NA	False	NA	NA	NA	20679626	20679452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_20679500_20679600
m54284U_201001_173734/11667525/ccs	chr9	-	204	1	Intergenic	novelGene_4872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGCAGATTATCTTGCA	NA	False	NA	NA	False	NA	NA	NA	64707536	64707332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_64707300_64707500
m54284U_201001_173734/11667984/ccs	chr7	-	2778	1	Intergenic	novelGene_3927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	9397	False	NA	NA	False	NA	NA	NA	80895673	80892895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_80892900_80895700
m54284U_201001_173734/116850993/ccs	chr9	-	189	1	Intergenic	novelGene_4754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTCACAGGCTTCAAAGT	9770	False	NA	NA	False	NA	NA	NA	48955289	48955100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_48955100_48955300
m54284U_201001_173734/116852295/ccs	chr18	+	178	1	Intergenic	novelGene_8808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAAAAAGGGCATTTCT	NA	False	NA	NA	False	NA	NA	NA	10090386	10090564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_10090400_10090600
m54284U_201001_173734/116917998/ccs	chr1	+	196	1	Intergenic	novelGene_511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTAACTTTTGTG	3010	False	NA	NA	False	NA	NA	NA	180544600	180544796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_180544600_180544800
m54284U_201001_173734/116918943/ccs	chr5	+	186	1	Intergenic	novelGene_2732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTGTGAAGAAGAGCACA	8654	False	NA	NA	False	NA	NA	NA	108009866	108010052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108009900_108010100
m54284U_201001_173734/116984283/ccs	chr4	+	177	1	Intergenic	novelGene_2233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATCTTAAAAAAAAA	119	False	NA	NA	False	NA	NA	NA	134121970	134122147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_134122000_134122100
m54284U_201001_173734/11733149/ccs	chr1	+	209	1	Intergenic	novelGene_173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTATGCTAGTCCCCAAT	NA	False	NA	NA	False	NA	NA	NA	71947920	71948129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_71947900_71948100
m54284U_201001_173734/117704523/ccs	chr12	+	217	1	Intergenic	novelGene_6750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCCTATGCTTGATTC	3237	False	NA	NA	False	NA	NA	NA	79765617	79765834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_79765600_79765800
m54284U_201001_173734/117704761/ccs	chr11	-	2306	13	NNC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	25	junction_9	317.153518294637	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687229	120680027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684693_120684773_120685093_120685145_120685728_120685838_120686302
m54284U_201001_173734/118031193/ccs	chr11	-	176	1	Intergenic	novelGene_6181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGATATTATGATGA	NA	False	NA	NA	False	NA	NA	NA	87518937	87518761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87518800_87518900
m54284U_201001_173734/118032652/ccs	chr4	-	2210	1	FSM	ENSMUSG00000065451.3	ENSMUST00000083517.3	83	1	72	-2199	72	2199	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCGTGTATCTGTCTGT	NA	False	NA	NA	False	NA	NA	NA	101204152	101201942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_101201900_101204200
m54284U_201001_173734/118360808/ccs	chr7	-	860	5	NIC	ENSMUSG00000030960.17	novel	1107	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	164.442049062884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTGGTTTTTGTGC	NA	False	NA	NA	False	AGTAAA	-18	NA	132454368	132429185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_132429612_132438828_132438937_132452319_132452439_132453154_132453221_132454227
m54284U_201001_173734/118489232/ccs	chr4	+	176	1	Intergenic	novelGene_2202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTATGTGCATATTTGTG	NA	False	NA	NA	False	NA	NA	NA	132507389	132507565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132507400_132507600
m54284U_201001_173734/118622375/ccs	chrX	+	180	1	Intergenic	novelGene_9520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGAACACTCTTTGCAT	NA	False	NA	NA	False	NA	NA	NA	87113244	87113424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_87113200_87113400
m54284U_201001_173734/119014398/ccs	chrX	-	194	1	Intergenic	novelGene_9507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTACTGACCTGTACAGC	NA	False	NA	NA	False	NA	NA	NA	73360768	73360574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_73360600_73360800
m54284U_201001_173734/11927899/ccs	chr7	-	2243	1	Genic_Genomic	ENSMUSG00000030717.10	novel	NA	NA	NA	NA	-15	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGGCGTGTGTTGTGTG	NA	False	NA	-7	True	AATAAA	-17	NA	126224662	126222419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_-_126222400_126224700
m54284U_201001_173734/119472886/ccs	chr5	-	194	1	Intergenic	novelGene_3072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCCGATGGCTGAGTCT	NA	False	NA	NA	False	NA	NA	NA	146854588	146854394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_146854400_146854600
m54284U_201001_173734/119474829/ccs	chr6	-	4204	26	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_25	42.4726924034726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	143045867	142956653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
m54284U_201001_173734/119537921/ccs	chr2	+	185	1	Intergenic	novelGene_685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATTAAGTGAAAACCTC	NA	False	NA	NA	False	NA	NA	NA	30252321	30252506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30252300_30252500
m54284U_201001_173734/119669406/ccs	chr4	+	194	1	Intergenic	novelGene_1929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTGGAAAGAACACTGAT	NA	False	NA	NA	False	NA	NA	NA	87324891	87325085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_87324900_87325100
m54284U_201001_173734/119867152/ccs	chr14	+	166	1	Intergenic	novelGene_7408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACAGGATAGAAC	NA	False	NA	NA	False	NA	NA	NA	44358308	44358474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_44358300_44358500
m54284U_201001_173734/119868010/ccs	chr16	+	191	1	Intergenic	novelGene_8276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTGTGTTTAATCTTGCC	NA	False	NA	NA	False	NA	NA	NA	52842784	52842975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_52842800_52843000
m54284U_201001_173734/11994951/ccs	chr4	+	177	1	Intergenic	novelGene_2432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAAGTCATGT	NA	False	NA	NA	False	NA	NA	NA	155752169	155752346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_155752200_155752300
m54284U_201001_173734/120456207/ccs	chr9	+	199	1	Intergenic	novelGene_5059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGCTAAATCTTGGGA	NA	False	NA	NA	False	NA	NA	NA	106045940	106046139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_106045900_106046100
m54284U_201001_173734/120522708/ccs	chr15	-	522	3	NNC	ENSMUSG00000022450.7	novel	590	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	1922.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTCTCTCTTACTT	6297	False	NA	-13	True	GATAAA	-21	NA	82238438	82234340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_82234573_82235179_82235313_82238281
m54284U_201001_173734/120587573/ccs	chr18	+	190	1	Intergenic	novelGene_8953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGATTTGTGATTCCTTT	NA	False	NA	NA	False	NA	NA	NA	47086416	47086606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_47086400_47086600
m54284U_201001_173734/12058991/ccs	chr17	-	188	1	Intergenic	novelGene_8563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTATAATCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	35808673	35808485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35808500_35808700
m54284U_201001_173734/12125053/ccs	chr2	-	2993	5	NIC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1454	junction_3	91.9279609259337	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229664	105217273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105225218_105229314
m54284U_201001_173734/121373806/ccs	chr1	+	174	1	Intergenic	novelGene_454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGACAGATACTTT	4091	False	NA	NA	False	NA	NA	NA	167005555	167005729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_167005600_167005700
m54284U_201001_173734/121374365/ccs	chr7	+	3904	1	Intergenic	novelGene_4131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAACAAATCTAACTT	8908	False	NA	NA	False	NA	NA	NA	132673659	132677563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_132673700_132677600
m54284U_201001_173734/121503841/ccs	chr17	+	218	1	Intergenic	novelGene_8378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGATTGTCTAGCAAAG	NA	False	NA	NA	False	NA	NA	NA	15791823	15792041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_15791800_15792000
m54284U_201001_173734/121571246/ccs	chr13	-	586	4	Fusion	ENSMUSG00000074832.12_ENSMUSG00000114353.2	novel	2587	4	NA	NA	-59570	172	multi-exon	FALSE	canonical	3	24	junction_1	74.7276536646389	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1335	False	NA	0	True	NA	NA	NA	67010194	66577778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr13_-_66578071_66581478_66581540_66942962_66943090_67010088
m54284U_201001_173734/121635802/ccs	chr11	+	4800	1	Antisense	novelGene_ENSMUSG00000035455.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAATGAAATCCTG	6492	False	NA	NA	False	NA	NA	NA	11750620	11755420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_11750600_11755400
m54284U_201001_173734/122030536/ccs	chr5	+	203	1	Intergenic	novelGene_2464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTGTAGTGATTCAC	NA	False	NA	NA	False	AAGAAA	-3	NA	11716448	11716651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_11716400_11716700
m54284U_201001_173734/122225353/ccs	chr10	-	252	1	Intergenic	novelGene_5534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCCGGTTTCTCTTCTA	NA	False	NA	NA	False	AAGAAA	-36	NA	111072031	111071779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_111071800_111072000
m54284U_201001_173734/122552935/ccs	chr11	+	176	1	Intergenic	novelGene_5850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGGCTGGAGTGATGC	6979	False	NA	NA	False	NA	NA	NA	54873415	54873591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_54873400_54873600
m54284U_201001_173734/122880832/ccs	chr8	+	185	1	Intergenic	novelGene_4521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAGCAGGAGGAGGACA	NA	False	NA	NA	False	NA	NA	NA	112767296	112767481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112767300_112767500
m54284U_201001_173734/123076797/ccs	chr7	+	159	1	Intergenic	novelGene_3775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	29907609	29907768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29907600_29907800
m54284U_201001_173734/12321919/ccs	chr12	+	167	1	Intergenic	novelGene_6934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	112966433	112966600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_112966400_112966600
m54284U_201001_173734/12322741/ccs	chr9	-	153	1	Intergenic	novelGene_5048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102794727	102794574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_102794600_102794700
m54284U_201001_173734/123472119/ccs	chr4	+	2290	1	NIC	ENSMUSG00000028330.9	novel	3010	23	NA	NA	119	-19078	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAATTTAGATTGAATC	-22	True	NA	NA	False	NA	NA	NA	46138731	46141021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_46138700_46141000
m54284U_201001_173734/123601644/ccs	chr17	+	283	1	Intergenic	novelGene_8608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	46074727	46075010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_46074700_46075000
m54284U_201001_173734/123602131/ccs	chr1	+	191	1	Intergenic	novelGene_425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGTTATTAAACTA	1430	False	NA	NA	False	NA	NA	NA	160046340	160046531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_160046300_160046500
m54284U_201001_173734/123732015/ccs	chr5	+	171	1	Intergenic	novelGene_2952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTGCAGAATATGTGT	NA	False	NA	NA	False	NA	NA	NA	130235537	130235708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_130235500_130235700
m54284U_201001_173734/123733759/ccs	chr11	+	1475	1	Antisense	novelGene_ENSMUSG00000041961.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	5226089	5227564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_5226100_5227600
m54284U_201001_173734/123931263/ccs	chr6	+	178	1	Intergenic	novelGene_3159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGGGAGATGGG	NA	False	NA	NA	False	NA	NA	NA	31371449	31371627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_31371400_31371600
m54284U_201001_173734/123996057/ccs	chr3	-	159	1	Intergenic	novelGene_1532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAACATTTTAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	89892902	89892743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89892700_89892900
m54284U_201001_173734/124060024/ccs	chr2	+	2035	16	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	361.569627534664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCGTGTTGCACAAAGT	6642	False	NA	13	True	AATAAA	-17	NA	29779245	29812551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779291_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
m54284U_201001_173734/124388927/ccs	chr16	-	202	1	Intergenic	novelGene_8054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATGGACAAAGTTTGG	NA	False	NA	NA	False	NA	NA	NA	10547716	10547514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_10547500_10547700
m54284U_201001_173734/12451866/ccs	chrX	-	156	1	Intergenic	novelGene_9517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATAAATCTTTAGAATT	NA	False	NA	NA	False	NA	NA	NA	78157160	78157004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_78157000_78157200
m54284U_201001_173734/12453157/ccs	chr7	+	9157	1	Genic_Genomic	ENSMUSG00000064194.11	novel	NA	NA	NA	NA	3829	8046	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTATAATCTTACTGAG	NA	False	NA	NA	False	NA	NA	NA	42840422	42849579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_42840400_42849600
m54284U_201001_173734/124584489/ccs	chr19	+	177	1	Intergenic	novelGene_9277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAGCAAAAATA	NA	False	NA	NA	False	NA	NA	NA	43883763	43883940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_43883800_43883900
m54284U_201001_173734/124716798/ccs	chr8	+	220	1	Intergenic	novelGene_4301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGACTAGCATGA	NA	False	NA	NA	False	AATAAA	-19	NA	61356551	61356771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_61356600_61356800
m54284U_201001_173734/124846142/ccs	chr13	+	173	1	Intergenic	novelGene_7283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGTACTC	5692	False	NA	NA	False	NA	NA	NA	101539134	101539307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_101539100_101539300
m54284U_201001_173734/125042922/ccs	chr17	+	174	1	Intergenic	novelGene_8594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATGCTAAAATTAC	NA	False	NA	NA	False	NA	NA	NA	40758621	40758795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_40758600_40758800
m54284U_201001_173734/125045396/ccs	chr12	+	181	1	Intergenic	novelGene_6678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTCTGCCAATCTGGA	NA	False	NA	NA	False	NA	NA	NA	69207684	69207865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_69207700_69207900
m54284U_201001_173734/125109386/ccs	chr10	+	914	11	NNC	ENSMUSG00000078427.4	novel	918	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_5	1516.5587525711	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657776	128713498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684107_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
m54284U_201001_173734/125306003/ccs	chr6	+	217	1	Intergenic	novelGene_3405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAATCCTGCGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	98890506	98890723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_98890500_98890700
m54284U_201001_173734/125373043/ccs	chr1	+	179	1	Intergenic	novelGene_507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAAAAGGAACGGCT	NA	False	NA	NA	False	NA	NA	NA	180041109	180041288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_180041100_180041300
m54284U_201001_173734/125632861/ccs	chr9	+	181	1	Intergenic	novelGene_4718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAAGTAGCAGGCCTCT	NA	False	NA	NA	False	NA	NA	NA	40725651	40725832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_40725700_40725800
m54284U_201001_173734/126288788/ccs	chr1	+	162	1	Intergenic	novelGene_490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATATAATATAATATAAA	NA	False	NA	NA	False	NA	NA	NA	175663863	175664025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_175663900_175664000
m54284U_201001_173734/126289920/ccs	chr6	+	184	1	Intergenic	novelGene_3420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGAACCGGGTGGTG	9305	False	NA	NA	False	NA	NA	NA	113222140	113222324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_113222100_113222300
m54284U_201001_173734/12651313/ccs	chr19	+	195	1	Intergenic	novelGene_9297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGACTCTGAGCATCCT	2391	False	NA	NA	False	NA	NA	NA	45577542	45577737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45577500_45577700
m54284U_201001_173734/126550463/ccs	chr14	+	2498	1	Intergenic	novelGene_7546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76235133	76237631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_76235100_76237600
m54284U_201001_173734/12714631/ccs	chr11	-	163	1	Intergenic	novelGene_6090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATTGAGCCATTGTTCC	NA	False	NA	NA	False	NA	NA	NA	79863327	79863164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79863200_79863300
m54284U_201001_173734/127402572/ccs	chr14	+	973	1	FSM	ENSMUSG00000044285.9	ENSMUST00000111388.5	685	1	-100	-188	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTCCAGAAAATCAAATAA	NA	False	NA	NA	False	NA	NA	NA	46321484	46322457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_46321500_46322500
m54284U_201001_173734/127599911/ccs	chr2	-	178	1	Intergenic	novelGene_578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCTTTAAAAAAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	5950126	5949948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_5949900_5950100
m54284U_201001_173734/127731840/ccs	chr1	-	167	1	Intergenic	novelGene_479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAAAGGGGGG	954	False	NA	NA	False	NA	NA	NA	171294020	171293853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_171293900_171294000
m54284U_201001_173734/128190452/ccs	chr11	-	177	1	Intergenic	novelGene_6046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAGAAAA	3466	False	NA	NA	False	NA	NA	NA	77486566	77486389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_77486400_77486600
m54284U_201001_173734/128319948/ccs	chrX	-	192	1	Intergenic	novelGene_9676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTCTCAAGATTAGCACT	NA	False	NA	NA	False	NA	NA	NA	151097400	151097208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_151097200_151097400
m54284U_201001_173734/128385340/ccs	chr6	-	184	1	Intergenic	novelGene_3577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTATCTATGTATATGT	NA	False	NA	NA	False	NA	NA	NA	146719219	146719035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_146719000_146719200
m54284U_201001_173734/128451244/ccs	chr14	-	630	3	ISM	ENSMUSG00000052584.11	ENSMUST00000227076.2	865	5	6829	-2	6463	0	3prime_fragment	FALSE	canonical	3	14	junction_2	46	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATGTGCGAGTTACC	NA	False	NA	-2	True	AATAAA	-18	NA	76787469	76770253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_-_76770687_76777345_76777495_76787421
m54284U_201001_173734/128452281/ccs	chr10	-	158	1	Intergenic	novelGene_5297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	52206188	52206030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_52206000_52206200
m54284U_201001_173734/128516729/ccs	chr9	+	171	1	Intergenic	novelGene_4674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCACTTTCAATTATGCA	NA	False	NA	NA	False	NA	NA	NA	22236765	22236936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_22236800_22236900
m54284U_201001_173734/128518580/ccs	chr5	-	182	1	Intergenic	novelGene_2814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGCATTTTGAAA	995	False	NA	NA	False	NA	NA	NA	116023487	116023305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_116023300_116023500
m54284U_201001_173734/128582620/ccs	chrX	-	184	1	Intergenic	novelGene_9570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTATATTGAAAGCTACA	NA	False	NA	NA	False	NA	NA	NA	101100134	101099950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_101100000_101100100
m54284U_201001_173734/128648454/ccs	chr17	+	1446	1	Intergenic	novelGene_8746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTGCAGAACACTTA	NA	False	NA	NA	False	NA	NA	NA	80746803	80748249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_80746800_80748200
m54284U_201001_173734/128714658/ccs	chr1	-	6610	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9550	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_39	323.618911684716	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	NA	False	NA	17	True	NA	NA	NA	84827787	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772046_84792543_84792691_84827643
m54284U_201001_173734/128778252/ccs	chr18	+	196	1	Antisense	novelGene_ENSMUSG00000118131.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGCCAAAAACAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	67284170	67284366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_+_67284200_67284400
m54284U_201001_173734/128976851/ccs	chr15	+	176	1	Intergenic	novelGene_7705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGCATCAAAGAT	NA	False	NA	NA	False	NA	NA	NA	48577222	48577398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_48577200_48577400
m54284U_201001_173734/129042599/ccs	chr1	+	193	1	Intergenic	novelGene_489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	174275166	174275359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_174275200_174275400
m54284U_201001_173734/129239398/ccs	chr15	-	178	1	Intergenic	novelGene_7729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGACATTTA	7116	False	NA	NA	False	NA	NA	NA	58027226	58027048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_58027000_58027200
m54284U_201001_173734/129436450/ccs	chr1	+	187	1	Intergenic	novelGene_215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTTGTTTTCAGACTA	NA	False	NA	NA	False	NA	NA	NA	83602430	83602617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_83602400_83602600
m54284U_201001_173734/129567078/ccs	chr1	-	176	1	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGTGGATTCTGG	NA	False	NA	NA	False	NA	NA	NA	6417521	6417345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_6417300_6417500
m54284U_201001_173734/130222345/ccs	chr11	-	2650	1	FSM	ENSMUSG00000077625.3	ENSMUST00000104437.3	71	1	-1828	-751	-1828	751	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	5963	False	NA	-14	True	CATAAA	-1	NA	78074410	78071760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_78071800_78074400
m54284U_201001_173734/130353913/ccs	chr9	+	206	1	Intergenic	novelGene_4812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGAAGGGGGCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	58175085	58175291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_58175100_58175300
m54284U_201001_173734/130614676/ccs	chr2	-	180	1	Intergenic	novelGene_1206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTGGCATTATATC	NA	False	NA	-5	True	NA	NA	NA	163358957	163358777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_163358800_163359000
m54284U_201001_173734/130745174/ccs	chr9	+	2530	1	Intergenic	novelGene_4988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	88306857	88309387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_88306900_88309400
m54284U_201001_173734/130746473/ccs	chr9	+	186	1	Intergenic	novelGene_5080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACATTGGTTACATAGC	NA	False	NA	NA	False	NA	NA	NA	108144354	108144540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108144400_108144500
m54284U_201001_173734/131007306/ccs	chr6	+	188	1	Intergenic	novelGene_3343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATAAAGTATTTCTAAG	NA	False	NA	NA	False	NA	NA	NA	83788574	83788762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_83788600_83788800
m54284U_201001_173734/131007590/ccs	chr2	+	3420	1	Intergenic	novelGene_990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGGGAAGGGAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	115721636	115725056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_115721600_115725100
m54284U_201001_173734/131139262/ccschrUn	chrUn_MU069435v1	+	178	1	Intergenic	novelGene_9746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTCTCCAGCTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	7447	7625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_MU069435v1_+_7400_7600
m54284U_201001_173734/1311664/ccs	chr4	+	293	1	Intergenic	novelGene_1769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21764243	21764536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_21764200_21764500
m54284U_201001_173734/131271093/ccs	chr1	+	2124	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	0	700	0	-700	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGTCCCTGACCCAGA	NA	False	NA	92	True	NA	NA	NA	119453889	119456013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_119453900_119456000
m54284U_201001_173734/131596815/ccs	chr10	-	207	1	Intergenic	novelGene_5616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAACCCTTTCCTCTCCA	5875	False	NA	NA	False	NA	NA	NA	128001733	128001526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128001500_128001700
m54284U_201001_173734/131728987/ccs	chr17	+	162	1	Intergenic	novelGene_8709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGATGAGGACCACAGG	NA	False	NA	NA	False	NA	NA	NA	71305776	71305938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71305800_71305900
m54284U_201001_173734/13175271/ccs	chr3	+	208	1	Intergenic	novelGene_1653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGCATATCTACCTTG	NA	False	NA	NA	False	NA	NA	NA	121178272	121178480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_121178300_121178500
m54284U_201001_173734/131991928/ccs	chr14	+	187	1	Intergenic	novelGene_7561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCATAATGGCAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	79714617	79714804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_79714600_79714800
m54284U_201001_173734/132253252/ccs	chr6	+	159	1	Intergenic	novelGene_3198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38325969	38326128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38326000_38326100
m54284U_201001_173734/13238532/ccs	chrX	-	178	1	Intergenic	novelGene_9468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGAAAAGAATTTAAAG	NA	False	NA	NA	False	NA	NA	NA	55522450	55522272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_55522300_55522400
m54284U_201001_173734/132907120/ccs	chr11	+	1971	1	Intergenic	novelGene_6432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTAAAACTTTTATTTGA	NA	False	NA	NA	False	NA	NA	NA	113368359	113370330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_113368400_113370300
m54284U_201001_173734/133039915/ccs	chr8	+	164	1	Intergenic	novelGene_4262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATTAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	34383258	34383422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_34383300_34383400
m54284U_201001_173734/133040720/ccs	chr10	+	5731	24	NIC	ENSMUSG00000019907.11	novel	3403	26	NA	NA	-93	-333	combination_of_known_splicesites	TRUE	canonical	0	0	junction_19	54.0733940775863	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAGTTTTTTTATGCCA	NA	False	NA	12	True	CATAAA	-23	NA	107997960	108115512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
m54284U_201001_173734/13305694/ccs	chr17	+	180	1	Intergenic	novelGene_8771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATGGGGAACAGAGA	NA	False	NA	NA	False	NA	NA	NA	85943436	85943616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_85943400_85943600
m54284U_201001_173734/133106182/ccs	chr17	-	195	1	Intergenic	novelGene_8654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTCGATTCTCAAAAAAAA	521	False	NA	NA	False	NA	NA	NA	56570985	56570790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_56570800_56571000
m54284U_201001_173734/133431796/ccs	chr17	+	179	1	Intergenic	novelGene_8540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAAAAAAGGCCCT	631	False	NA	NA	False	NA	NA	NA	34212614	34212793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_34212600_34212800
m54284U_201001_173734/133432299/ccs	chr13	-	176	1	Intergenic	novelGene_7199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGGCAGTGGCTGG	NA	False	NA	NA	False	NA	NA	NA	69895482	69895306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_69895300_69895500
m54284U_201001_173734/133760273/ccs	chr3	+	5201	1	NIC	ENSMUSG00000038861.15	novel	3692	11	NA	NA	0	-16013	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCAGTGGTGGCGCACGC	NA	False	NA	NA	False	NA	NA	NA	94882041	94887242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_94882000_94887200
m54284U_201001_173734/133825121/ccs	chr14	+	3868	1	NIC	ENSMUSG00000100162.3	novel	4242	7	NA	NA	39626	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGGTCTTTATTTCCGTT	NA	False	NA	7	True	AATAAA	-18	NA	55332575	55336443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55332600_55336400
m54284U_201001_173734/133891405/ccs	chr16	+	375	1	Intergenic	novelGene_8212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTACTCTCTGTGTGTGTA	3169	False	NA	NA	False	NA	NA	NA	32145991	32146366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_32146000_32146400
m54284U_201001_173734/133957953/ccs	chr5	+	186	1	Intergenic	novelGene_2803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGTTAAAAAA	5189	False	NA	NA	False	NA	NA	NA	115460538	115460724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115460500_115460700
m54284U_201001_173734/134217862/ccs	chr3	-	171	1	Intergenic	novelGene_1373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGGACCAATTGTGTG	NA	False	NA	-42	True	NA	NA	NA	31115130	31114959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_31115000_31115100
m54284U_201001_173734/134219811/ccs	chr6	+	1614	1	NIC	ENSMUSG00000030275.7	novel	1791	8	NA	NA	0	-23439	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATCTTACTAATTAAA	NA	False	NA	NA	False	AATAAA	-13	NA	143112955	143114569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_143113000_143114600
m54284U_201001_173734/134349254/ccs	chr11	+	174	1	Intergenic	novelGene_6303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCAAATAAATTT	NA	False	NA	NA	False	NA	NA	NA	98439507	98439681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98439500_98439700
m54284U_201001_173734/134611733/ccs	chr6	+	182	1	Intergenic	novelGene_3455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAACAAGAAAAACCAGAG	NA	False	NA	NA	False	NA	NA	NA	120269259	120269441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120269300_120269400
m54284U_201001_173734/134677319/ccs	chr11	+	1758	1	Genic_Genomic	ENSMUSG00000043372.13	novel	NA	NA	NA	NA	4318	64	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATAAAGTGTGCCCTCT	451	False	NA	54	True	AATAAA	-37	NA	103029008	103030766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_103029000_103030800
m54284U_201001_173734/134679290/ccs	chr5	+	178	1	Intergenic	novelGene_2954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	131107492	131107670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_131107500_131107700
m54284U_201001_173734/134808119/ccs	chr9	+	147	1	Intergenic	novelGene_5013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAAGGCCCTTT	9262	False	NA	NA	False	AATAAA	-11	NA	96277762	96277909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96277800_96277900
m54284U_201001_173734/134873836/ccs	chr13	+	171	1	Intergenic	novelGene_6951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGGGGTACAGAA	NA	False	NA	NA	False	NA	NA	NA	4669422	4669593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_4669400_4669600
m54284U_201001_173734/135529140/ccs	chr5	-	3688	6	NNC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	-238	0	intron_retention	FALSE	canonical	2	24	junction_3	418.956799682258	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187761	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100184511_100184720_100184836_100184943_100185072_100185426_100185589_100185671_100185841_100186578
m54284U_201001_173734/135923093/ccs	chr4	+	162	1	Intergenic	novelGene_2262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACTTTTTTAAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	136331055	136331217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_136331100_136331200
m54284U_201001_173734/136250914/ccs	chr11	+	183	1	Intergenic	novelGene_6342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGCTGTATCATAACAGA	NA	False	NA	NA	False	NA	NA	NA	101535764	101535947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101535800_101535900
m54284U_201001_173734/136511668/ccs	chr3	+	170	1	Intergenic	novelGene_1625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAGAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	108029145	108029315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_108029100_108029300
m54284U_201001_173734/136645019/ccs	chr19	-	3874	7	NNC	ENSMUSG00000037071.4	novel	4832	6	NA	NA	-2765	-1104	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	245.996217224755	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATTCCCCAGATCTGA	9687	False	NA	NA	False	AATAAA	-26	NA	44399083	44383997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824_44396018_44398806
m54284U_201001_173734/13697031/ccs	chr2	+	191	1	Intergenic	novelGene_1164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCTTTTCAGCACTCAC	6269	False	NA	NA	False	NA	NA	NA	155574445	155574636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155574400_155574600
m54284U_201001_173734/137036254/ccs	chr5	-	173	1	Intergenic	novelGene_2855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAAGTCTGTGTGG	7153	False	NA	NA	False	NA	NA	NA	121653345	121653172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121653200_121653300
m54284U_201001_173734/137167512/ccs	chr2	+	1680	1	FSM	ENSMUSG00000061897.6	ENSMUST00000118761.2	456	1	-187	-1037	-187	1037	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAACTTTAAATGTTC	NA	False	NA	NA	False	ATTAAA	-33	NA	178819030	178820710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_178819000_178820700
m54284U_201001_173734/13762763/ccs	chr5	+	157	1	Intergenic	novelGene_2513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	322	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAATAAAAAAAATA	NA	False	NA	-16	True	NA	NA	NA	31067427	31067584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_31067400_31067600
m54284U_201001_173734/13762971/ccs	chrX	-	182	1	Intergenic	novelGene_9532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGTGCAGAAGTATTTT	NA	False	NA	NA	False	NA	NA	NA	92701471	92701289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_92701300_92701500
m54284U_201001_173734/1376764/ccs	chr2	+	1676	3	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-314	-440	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	31	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGACTCATCAGTAT	NA	False	NA	NA	False	NA	NA	NA	177400766	177411315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_177401169_177409836_177409964_177410168
m54284U_201001_173734/137691733/ccs	chr8	+	185	1	Intergenic	novelGene_4310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAAATGTCTCAAATAA	NA	False	NA	NA	False	NA	NA	NA	68959194	68959379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_68959200_68959400
m54284U_201001_173734/137691939/ccs	chr6	+	194	1	Intergenic	novelGene_3169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTCTTCTGGGTAGG	NA	False	NA	NA	False	NA	NA	NA	35124412	35124606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_35124400_35124600
m54284U_201001_173734/138217839/ccs	chr19	+	2910	32	NIC	ENSMUSG00000024948.16	novel	4644	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	6.7912228351199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACTAGTCTCTCTGAG	1386	False	NA	10	True	ATTAAA	-14	NA	6391184	6403898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396848_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
m54284U_201001_173734/138674541/ccs	chr4	+	181	1	Intergenic	novelGene_1759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATGCATGGTATT	NA	False	NA	NA	False	NA	NA	NA	16953675	16953856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_16953700_16953900
m54284U_201001_173734/138806005/ccs	chrX	+	242	1	Intergenic	novelGene_9434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTTTTCCTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	38487878	38488120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_38487900_38488100
m54284U_201001_173734/139395960/ccs	chr2	-	176	1	Intergenic	novelGene_779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGCATTAA	NA	False	NA	NA	False	NA	NA	NA	38987822	38987646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_38987600_38987800
m54284U_201001_173734/139593015/ccs	chr19	-	188	1	Intergenic	novelGene_9300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGATGGGTGGGGCCT	110	False	NA	NA	False	NA	NA	NA	45783935	45783747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45783700_45783900
m54284U_201001_173734/139921546/ccs	chr1	-	176	1	Antisense	novelGene_ENSMUSG00000043282.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATTAGGTA	NA	False	NA	NA	False	NA	NA	NA	153752273	153752097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_153752100_153752300
m54284U_201001_173734/139985026/ccs	chrX	+	175	1	Intergenic	novelGene_9640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAGAATTGTCGGT	NA	False	NA	NA	False	NA	NA	NA	135920929	135921104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_135920900_135921100
m54284U_201001_173734/140771809/ccs	chr4	+	567	1	FSM	ENSMUSG00000070572.8	ENSMUST00000117987.2	378	1	0	-189	0	189	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTAGCTACTTCCTAA	1914	False	NA	NA	False	ATTAAA	-35	NA	149541785	149542352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_149541800_149542400
m54284U_201001_173734/140772898/ccs	chr15	-	187	1	Intergenic	novelGene_7823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTGATGCTCAAGTATG	NA	False	NA	NA	False	NA	NA	NA	80062916	80062729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_80062700_80062900
m54284U_201001_173734/141231054/ccs	chr4	+	184	1	Intergenic	novelGene_2309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAACTCAGGAATATCG	NA	False	NA	NA	False	NA	NA	NA	141339630	141339814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141339600_141339800
m54284U_201001_173734/141296202/ccs	chr5	-	196	1	Intergenic	novelGene_2870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGTGAAGAGAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	122437530	122437334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_122437300_122437500
m54284U_201001_173734/141297695/ccs	chrX	+	169	1	Intergenic	novelGene_9701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	158238647	158238816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_158238600_158238800
m54284U_201001_173734/141625024/ccs	chr7	+	180	1	Intergenic	novelGene_3677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAACACACAACT	2358	False	NA	NA	False	NA	NA	NA	18649441	18649621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_18649400_18649600
m54284U_201001_173734/14223910/ccs	chr9	-	156	1	Intergenic	novelGene_4804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAGAAAGAAAGA	3330	False	NA	NA	False	NA	NA	NA	57762891	57762735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_57762700_57762900
m54284U_201001_173734/142608988/ccs	chr1	-	171	1	Intergenic	novelGene_156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAACCTGTATTCTTT	8497	False	NA	NA	False	NA	NA	NA	60894039	60893868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_60893900_60894000
m54284U_201001_173734/142672411/ccs	chr4	-	170	1	Intergenic	novelGene_1870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAAAAAGAACCCTGGG	NA	False	NA	NA	False	NA	NA	NA	55099899	55099729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_55099700_55099900
m54284U_201001_173734/142804055/ccs	chr9	-	210	1	Intergenic	novelGene_4819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGCGTAGGGCACCACC	NA	False	NA	NA	False	NA	NA	NA	58621330	58621120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58621100_58621300
m54284U_201001_173734/142870537/ccs	chrX	+	177	1	Intergenic	novelGene_9534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAAAATGATC	NA	False	NA	NA	False	NA	NA	NA	92821958	92822135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_92822000_92822100
m54284U_201001_173734/142936390/ccs	chr8	+	173	1	Intergenic	novelGene_4352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTATCTTTAAAAAACGAAAA	NA	False	NA	NA	False	NA	NA	NA	79136234	79136407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_79136200_79136400
m54284U_201001_173734/143066562/ccs	chrX	+	183	1	Intergenic	novelGene_9571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAACATTGGTGATTTTGT	NA	False	NA	NA	False	NA	NA	NA	101174718	101174901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_101174700_101174900
m54284U_201001_173734/143263650/ccs	chr4	-	193	1	Intergenic	novelGene_1993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTCTGCCTGGCAAA	NA	False	NA	NA	False	NA	NA	NA	108186726	108186533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108186500_108186700
m54284U_201001_173734/143329269/ccs	chr12	+	383	1	Intergenic	novelGene_6802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACATTTCAAGGGTTCA	NA	False	NA	NA	False	NA	NA	NA	84586578	84586961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_84586600_84587000
m54284U_201001_173734/143526646/ccs	chr19	-	1726	1	Antisense	novelGene_ENSMUSG00000032702.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCCTGATATCACCAGGT	NA	False	NA	NA	False	NA	NA	NA	25402965	25401239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_-_25401200_25403000
m54284U_201001_173734/14354997/ccs	chr11	+	171	1	Intergenic	novelGene_6410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAATAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	107043174	107043345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107043200_107043300
m54284U_201001_173734/143591577/ccs	chr15	+	181	1	Intergenic	novelGene_7923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGAAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	96525939	96526120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_96525900_96526100
m54284U_201001_173734/143722077/ccs	chr4	+	204	1	NIC	ENSMUSG00000082334.2	novel	1446	2	NA	NA	494	-958	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTGGAGAGTGCTGAT	NA	False	NA	NA	False	NA	NA	NA	145472809	145473013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_145472800_145473000
m54284U_201001_173734/143853292/ccs	chr13	+	186	1	Intergenic	novelGene_7265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAACAAAACAAAACCC	NA	False	NA	NA	False	NA	NA	NA	97345833	97346019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97345800_97346000
m54284U_201001_173734/143983753/ccs	chr15	+	194	1	Intergenic	novelGene_7796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCCACTCCGAAGCATT	NA	False	NA	NA	False	NA	NA	NA	77728069	77728263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_77728100_77728300
m54284U_201001_173734/1442532/ccs	chr17	+	198	1	Intergenic	novelGene_8496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCATTAGATAGCTGCTG	NA	False	NA	NA	False	NA	NA	NA	29793047	29793245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29793000_29793200
m54284U_201001_173734/144572923/ccs	chr3	+	166	1	Intergenic	novelGene_1479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAAATATTTTT	9060	False	NA	NA	False	NA	NA	NA	88179390	88179556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88179400_88179600
m54284U_201001_173734/144574808/ccs	chr10	+	4876	1	NIC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	0	-11169	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCAACAGAAAACAAGCC	2289	False	NA	NA	False	NA	NA	NA	71183665	71188541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_71183700_71188500
m54284U_201001_173734/144638859/ccs	chr6	+	193	1	Intergenic	novelGene_3523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAATACTGCTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	128184731	128184924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_128184700_128184900
m54284U_201001_173734/144837465/ccs	chr4	+	177	1	Intergenic	novelGene_2177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATAT	791	False	NA	NA	False	NA	NA	NA	130906043	130906220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_130906000_130906200
m54284U_201001_173734/144965702/ccs	chr4	+	187	1	Intergenic	novelGene_2389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCCATGCAAGCCCAAAG	3849	False	NA	NA	False	NA	NA	NA	149706763	149706950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149706800_149707000
m54284U_201001_173734/144966488/ccs	chr2	-	175	1	Intergenic	novelGene_700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGCCACCG	NA	False	NA	NA	False	NA	NA	NA	31306578	31306403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31306400_31306600
m54284U_201001_173734/144967455/ccs	chr9	-	167	1	Intergenic	novelGene_4912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAGTATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70330482	70330315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_70330300_70330500
m54284U_201001_173734/145097097/ccs	chr10	+	246	1	Intergenic	novelGene_5372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTAATGTGTGGAGAA	NA	False	NA	NA	False	NA	NA	NA	66915390	66915636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_66915400_66915600
m54284U_201001_173734/145425752/ccs	chr8	+	170	1	Intergenic	novelGene_4319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAACAAAATAT	NA	False	NA	NA	False	NA	NA	NA	70460477	70460647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_70460500_70460600
m54284U_201001_173734/14550028/ccs	chrX	-	181	1	Intergenic	novelGene_9573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAGCAGAAGGAAGCG	9543	False	NA	NA	False	NA	NA	NA	101258680	101258499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_101258500_101258700
m54284U_201001_173734/145556472/ccs	chrM	+	942	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	-142	238	-142	-238	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAGAACTTATAAAAAACA	332	False	NA	12	True	AATGAA	-8	NA	3771	4713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_3800_4700
m54284U_201001_173734/145623328/ccs	chr5	+	178	1	Intergenic	novelGene_2674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTTTTGCCGGGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	92726987	92727165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92727000_92727200
m54284U_201001_173734/146145836/ccs	chr4	+	172	1	Intergenic	novelGene_2264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAACATAAAATAC	NA	False	NA	NA	False	NA	NA	NA	136587591	136587763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_136587600_136587800
m54284U_201001_173734/146277219/ccs	chr2	-	190	1	Intergenic	novelGene_695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCCCTGGAGTTGGAAC	3156	False	NA	NA	False	NA	NA	NA	31051047	31050857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31050900_31051000
m54284U_201001_173734/14680147/ccs	chr4	+	185	1	Intergenic	novelGene_2042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCAATTAGTATAGACAA	NA	False	NA	NA	False	NA	NA	NA	117245442	117245627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_117245400_117245600
m54284U_201001_173734/14748125/ccs	chr11	+	166	1	Intergenic	novelGene_6023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75888396	75888562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75888400_75888600
m54284U_201001_173734/147850546/ccs	chr10	-	178	1	Intergenic	novelGene_5355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATAGATAGATAGA	2494	False	NA	NA	False	NA	NA	NA	62754064	62753886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62753900_62754100
m54284U_201001_173734/147917395/ccs	chr1	+	186	1	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAGGACTCTGCCTCGA	NA	False	NA	NA	False	NA	NA	NA	38229860	38230046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_38229900_38230000
m54284U_201001_173734/148046521/ccs	chr11	+	178	1	Intergenic	novelGene_5889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGAGAGTGCAGGATGTA	NA	False	NA	NA	False	NA	NA	NA	60771903	60772081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_60771900_60772100
m54284U_201001_173734/148373760/ccs	chr19	+	171	1	Intergenic	novelGene_9115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATTTTTAAAAAG	6020	False	NA	NA	False	NA	NA	NA	6091119	6091290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6091100_6091300
m54284U_201001_173734/148898144/ccs	chr13	+	189	1	Intergenic	novelGene_7231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTAGATAAATGATCG	NA	False	NA	NA	False	NA	NA	NA	91400337	91400526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_91400300_91400500
m54284U_201001_173734/149029412/ccs	chr7	+	177	1	Intergenic	novelGene_4013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATATAAGTTCGGAA	NA	False	NA	NA	False	NA	NA	NA	109550299	109550476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109550300_109550500
m54284U_201001_173734/149160247/ccs	chr4	+	193	1	Intergenic	novelGene_2121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAATGAGAAAAAT	857	False	NA	NA	False	NA	NA	NA	126678556	126678749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126678600_126678700
m54284U_201001_173734/149358325/ccs	chr9	-	6420	40	NIC	ENSMUSG00000059495.15	novel	10059	42	NA	NA	-204	-4479	combination_of_known_junctions	FALSE	canonical	2	2	junction_34	6.46164021083909	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGTATAATTATACAT	NA	False	NA	NA	False	TATAAA	-22	NA	43017486	42879617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934106_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
m54284U_201001_173734/149423858/ccs	chr11	+	211	1	Intergenic	novelGene_6395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTGTTTTCAGGGATTC	8128	False	NA	NA	False	TTTAAA	-8	NA	106696799	106697010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106696800_106697000
m54284U_201001_173734/149489149/ccs	chr14	+	169	1	Intergenic	novelGene_7395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTTTTAAACATGT	NA	False	NA	NA	False	NA	NA	NA	34206365	34206534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_34206400_34206500
m54284U_201001_173734/149490414/ccs	chr12	-	181	1	Intergenic	novelGene_6907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTAACTAAGAAAATGCC	NA	False	NA	NA	False	NA	NA	NA	111105028	111104847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111104800_111105000
m54284U_201001_173734/149620419/ccs	chr16	+	189	1	Intergenic	novelGene_8328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAGAAGGACATCT	5022	False	NA	NA	False	NA	NA	NA	91497669	91497858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_91497700_91497900
m54284U_201001_173734/15008640/ccs	chr3	+	176	1	Intergenic	novelGene_1528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAAATGTAGA	1190	False	NA	NA	False	NA	NA	NA	89821375	89821551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89821400_89821600
m54284U_201001_173734/150274712/ccs	chr11	+	870	1	Intergenic	novelGene_5770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTGTCAAGGTGCTGAA	NA	False	NA	NA	False	NA	NA	NA	33457008	33457878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_33457000_33457900
m54284U_201001_173734/150536391/ccs	chr6	+	176	1	Intergenic	novelGene_3214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGCAGTTAA	200	False	NA	NA	False	NA	NA	NA	38551762	38551938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38551800_38551900
m54284U_201001_173734/150733233/ccs	chr11	-	199	1	Intergenic	novelGene_5796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGGAAACTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	49701693	49701494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_49701500_49701700
m54284U_201001_173734/15074623/ccs	chr12	+	177	1	Intergenic	novelGene_6690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCTTAAAAAAAAATTCTT	NA	False	NA	NA	False	NA	NA	NA	69869993	69870170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_69870000_69870200
m54284U_201001_173734/150798650/ccs	chr13	-	203	1	Intergenic	novelGene_7122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAACAGTGTATTGTAC	9316	False	NA	NA	False	TTTAAA	-2	NA	58391174	58390971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58391000_58391200
m54284U_201001_173734/1508208/ccs	chr5	-	1951	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_9	494.956813180282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650236	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
m54284U_201001_173734/150864293/ccs	chr2	-	181	1	Intergenic	novelGene_912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGAGTTATGAATATG	5035	False	NA	NA	False	NA	NA	NA	90390146	90389965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_90390000_90390100
m54284U_201001_173734/150864860/ccs	chr9	+	174	1	Intergenic	novelGene_4748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTGCAATTTTTAA	5166	False	NA	NA	False	NA	NA	NA	46278340	46278514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_46278300_46278500
m54284U_201001_173734/151323503/ccs	chr14	+	187	1	Intergenic	novelGene_7596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAACAGAGGGCAAG	NA	False	NA	NA	False	NA	NA	NA	118331660	118331847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_118331700_118331800
m54284U_201001_173734/151652436/ccs	chr9	+	175	1	Intergenic	novelGene_4916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGATGCATCGAG	757	False	NA	NA	False	NA	NA	NA	70574368	70574543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_70574400_70574500
m54284U_201001_173734/151783566/ccs	chr7	+	200	1	Intergenic	novelGene_3666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAGGTTAAATTTAG	NA	False	NA	NA	False	NA	NA	NA	15647804	15648004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_15647800_15648000
m54284U_201001_173734/152111355/ccs	chr8	+	190	1	Intergenic	novelGene_4604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGGATTCAATGCCTGC	NA	False	NA	NA	False	NA	NA	NA	125668865	125669055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_125668900_125669100
m54284U_201001_173734/152241204/ccs	chr6	+	7326	17	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_2	135.371017946974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847745	37943231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_37848410_37880467_37880587_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
m54284U_201001_173734/152307430/ccs	chr3	-	180	1	Intergenic	novelGene_1693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAATAAAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	135232860	135232680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_135232700_135232900
m54284U_201001_173734/152439196/ccs	chr15	-	3141	1	NIC	ENSMUSG00000023004.9	novel	1743	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCTGGATACTTTGT	31	False	NA	NA	False	AGTAAA	-18	NA	98832446	98829305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_98829300_98832400
m54284U_201001_173734/152502809/ccs	chr19	+	4427	1	Antisense	novelGene_ENSMUSG00000041488.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTCAGAGCTTAAGAG	NA	False	NA	NA	False	NA	NA	NA	11794061	11798488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_+_11794100_11798500
m54284U_201001_173734/15270578/ccs	chr4	-	176	1	Intergenic	novelGene_2392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTTAACTTGGCA	NA	False	NA	NA	False	NA	NA	NA	149878257	149878081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_149878100_149878300
m54284U_201001_173734/152764737/ccs	chr8	+	173	1	Intergenic	novelGene_4292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATCTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	48176120	48176293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_48176100_48176300
m54284U_201001_173734/152765047/ccs	chr7	-	1291	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	0	4655	0	-4655	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTGTTTTAGCTTCTT	NA	False	NA	-23	True	AATAAA	-21	NA	64522745	64521454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_64521500_64522700
m54284U_201001_173734/152962977/ccs	chr7	+	192	1	Intergenic	novelGene_3994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCTCATATCACAACTA	NA	False	NA	NA	False	NA	NA	NA	101813822	101814014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_101813800_101814000
m54284U_201001_173734/153092169/ccs	chr2	+	186	1	Intergenic	novelGene_1154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCGCAATCAGCAATTCT	1466	False	NA	NA	False	NA	NA	NA	155134992	155135178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155135000_155135200
m54284U_201001_173734/153094476/ccs	chr7	-	176	1	Intergenic	novelGene_4104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAGAAAAG	6562	False	NA	NA	False	NA	NA	NA	127339033	127338857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127338900_127339000
m54284U_201001_173734/153223339/ccs	chr19	-	179	1	Intergenic	novelGene_9315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACCTTGTAAAACC	NA	False	NA	NA	False	NA	NA	NA	46712101	46711922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_46711900_46712100
m54284U_201001_173734/153224839/ccs	chr15	+	165	1	Intergenic	novelGene_7771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGGGCAGCTC	NA	False	NA	NA	False	NA	NA	NA	76111538	76111703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76111500_76111700
m54284U_201001_173734/153487626/ccs	chr18	+	157	1	Intergenic	novelGene_8798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	5398614	5398771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_5398600_5398800
m54284U_201001_173734/153551704/ccs	chr10	-	2723	1	Intergenic	novelGene_5188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGTCTCGCTGGTCCTT	NA	False	NA	NA	False	NA	NA	NA	8422689	8419966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_8420000_8422700
m54284U_201001_173734/153748394/ccs	chr4	-	180	1	Intergenic	novelGene_2208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTTAAGATT	NA	False	NA	-6	True	NA	NA	NA	132685890	132685710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_132685700_132685900
m54284U_201001_173734/15403430/ccs	chr1	+	144	1	Intergenic	novelGene_129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGCAAAATTTTTTAAACT	NA	False	NA	NA	False	NA	NA	NA	57993370	57993514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_57993400_57993500
m54284U_201001_173734/154141811/ccs	chr14	+	192	1	Intergenic	novelGene_7525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACTAAAAAAAAAACCTAA	4766	False	NA	NA	False	NA	NA	NA	68091480	68091672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_68091500_68091700
m54284U_201001_173734/154208583/ccs	chr2	-	3550	1	NIC	ENSMUSG00000017307.17	novel	1017	5	NA	NA	170	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGCTGACCTTTAATAG	583	False	NA	-3	True	AATAAA	-17	NA	164638239	164634689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_164634700_164638200
m54284U_201001_173734/154405184/ccs	chr1	-	192	1	Intergenic	novelGene_301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCAGCCAGTGGCTGGG	3075	False	NA	NA	False	NA	NA	NA	131492327	131492135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_131492100_131492300
m54284U_201001_173734/154535232/ccs	chr7	+	96	1	Intergenic	novelGene_3849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAAATAAATTCAGTAAA	NA	False	NA	NA	False	NA	NA	NA	46419556	46419652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_46419600_46419700
m54284U_201001_173734/154535641/ccs	chr2	-	2542	1	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	3048	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	9743	False	NA	-14	True	AATAAA	-14	NA	34744655	34742113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_34742100_34744700
m54284U_201001_173734/154599953/ccs	chr1	+	193	1	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGGCAATCATGCCAG	NA	False	NA	NA	False	NA	NA	NA	21405209	21405402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_21405200_21405400
m54284U_201001_173734/154601546/ccs	chr14	+	4307	1	Intergenic	novelGene_7407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAATAAATAAA	NA	False	NA	NA	False	AATGAA	-9	NA	43169940	43174247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_43169900_43174200
m54284U_201001_173734/154665898/ccs	chr10	-	188	1	Intergenic	novelGene_5226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTCTGGAGAATTTCA	NA	False	NA	NA	False	NA	NA	NA	21932978	21932790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_21932800_21933000
m54284U_201001_173734/154861710/ccs	chr2	+	749	1	FSM	ENSMUSG00000082908.5	ENSMUST00000119272.2	253	1	-115	-381	-115	381	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTAAGGAGTCTACCTG	NA	False	NA	NA	False	AATAAA	-43	NA	87356373	87357122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_87356400_87357100
m54284U_201001_173734/154992836/ccs	chr3	+	107	1	FSM	ENSMUSG00000119891.1	ENSMUST00000239941.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTTCGACAAGGGAGCC	5634	False	NA	NA	False	NA	NA	NA	103334752	103334859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_103334800_103334900
m54284U_201001_173734/154993991/ccs	chr4	+	172	1	Intergenic	novelGene_2375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTCTTTTTACACTGA	2552	False	NA	NA	False	NA	NA	NA	149152546	149152718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149152500_149152700
m54284U_201001_173734/155058402/ccs	chr12	+	3143	1	NIC	ENSMUSG00000060716.8	novel	6439	29	NA	NA	0	-18001	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCATGTGGGGATGCCAG	6125	False	NA	NA	False	NA	NA	NA	79075936	79079079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_79075900_79079100
m54284U_201001_173734/155189803/ccs	chr11	+	176	1	Intergenic	novelGene_6514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAAAAGTG	2019	False	NA	NA	False	NA	NA	NA	120460139	120460315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120460100_120460300
m54284U_201001_173734/155191670/ccs	chr1	-	3505	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	54	305	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_18	201.111975922629	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTGCTTCTCAGCCTG	NA	False	NA	-3	True	AATATA	-37	NA	180971715	180920518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962626_180964437_180964496_180966635_180966733_180966818_180966867_180969890_180969957_180971615
m54284U_201001_173734/155387504/ccs	chr13	-	187	1	Intergenic	novelGene_7221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTAAAATATATTCAAATC	NA	False	NA	NA	False	NA	NA	NA	81836495	81836308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_81836300_81836500
m54284U_201001_173734/155452191/ccs	chr18	-	1117	3	NNC	ENSMUSG00000033022.9	novel	1466	4	NA	NA	11406	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	72.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACATTGCCTTTTTGATG	NA	False	NA	-3	True	AATAAA	-19	NA	46849690	46846270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_46847029_46848663_46848834_46849501
m54284U_201001_173734/155517079/ccs	chr6	-	185	1	Intergenic	novelGene_3526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACTTATTTTTTAAAAA	NA	False	NA	-2	True	AATACA	-6	NA	128365589	128365404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128365400_128365600
m54284U_201001_173734/155649920/ccs	chr11	+	159	1	Intergenic	novelGene_6089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79860919	79861078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79860900_79861100
m54284U_201001_173734/156175175/ccs	chr5	-	190	1	Intergenic	novelGene_2975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGTTTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	135333032	135332842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135332800_135333000
m54284U_201001_173734/156566639/ccs	chr2	+	233	1	Intergenic	novelGene_834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTACAATGATGCTTTATA	NA	False	NA	NA	False	NA	NA	NA	69705015	69705248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69705000_69705200
m54284U_201001_173734/156828438/ccs	chr5	-	3667	3	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-125	-83	intron_retention	FALSE	canonical	1	3	junction_2	121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATCTGAATGAATTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	9047167	9036263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_9039731_9043505_9043642_9047103
m54284U_201001_173734/157157189/ccs	chr5	+	180	1	Intergenic	novelGene_2466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12261201	12261381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_12261200_12261400
m54284U_201001_173734/157549544/ccs	chr9	+	197	1	Intergenic	novelGene_4648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGCAGTTAAGAGCACT	NA	False	NA	NA	False	NA	NA	NA	20772207	20772404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_20772200_20772400
m54284U_201001_173734/157549913/ccs	chr9	+	2125	1	FSM	ENSMUSG00000064225.7	ENSMUST00000079597.7	8367	1	274	5968	274	-5968	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGTCCTCAAACGTAG	NA	False	NA	NA	False	AATAAA	-26	NA	95441983	95444108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_95442000_95444100
m54284U_201001_173734/157812432/ccs	chr2	+	178	1	Intergenic	novelGene_1047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACACAATTATG	NA	False	NA	NA	False	NA	NA	NA	126336502	126336680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_126336500_126336700
m54284U_201001_173734/157877541/ccs	chr7	-	201	1	Intergenic	novelGene_4008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATAGACCTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	109256756	109256555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_109256600_109256800
m54284U_201001_173734/158075709/ccs	chr11	+	190	1	Intergenic	novelGene_6141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTAGTATTTCCAACA	NA	False	NA	NA	False	NA	NA	NA	85084208	85084398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_85084200_85084400
m54284U_201001_173734/158337315/ccs	chr7	-	168	1	Intergenic	novelGene_3721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTTTATAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	27014472	27014304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_27014300_27014500
m54284U_201001_173734/15861561/ccs	chr5	+	202	1	Intergenic	novelGene_2678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTCTTTCTTATATG	3492	False	NA	NA	False	NA	NA	NA	92965659	92965861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92965700_92965900
m54284U_201001_173734/158663978/ccs	chrX	-	1235	1	Antisense	novelGene_ENSMUSG00000031262.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAAAGAGTATTCTGGT	NA	False	NA	NA	False	NA	NA	NA	133225511	133224276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chrX_-_133224300_133225500
m54284U_201001_173734/158728403/ccs	chr11	-	176	1	Intergenic	novelGene_5898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	61474066	61473890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_61473900_61474100
m54284U_201001_173734/158730941/ccs	chr2	-	194	1	Intergenic	novelGene_1031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTCTCTAGACTTACTA	NA	False	NA	NA	False	NA	NA	NA	121608452	121608258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_121608300_121608500
m54284U_201001_173734/159057884/ccs	chr6	+	467	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	-61	-73	-61	73	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTTTTAATGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	48500390	48500857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_48500400_48500900
m54284U_201001_173734/159188149/ccs	chr2	-	188	1	Intergenic	novelGene_724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACAATTAAAGTTACAG	NA	False	NA	NA	False	NA	NA	NA	32606322	32606134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32606100_32606300
m54284U_201001_173734/159188596/ccs	chr1	+	3721	1	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTAAAGCCTTAAAAAAAA	NA	False	NA	NA	False	CATAAA	-32	NA	7456346	7460067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_7456300_7460100
m54284U_201001_173734/15927992/ccs	chr19	-	199	1	Intergenic	novelGene_9070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAACTTGGGAAGGTGT	NA	False	NA	NA	False	NA	NA	NA	3812067	3811868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_3811900_3812100
m54284U_201001_173734/159449797/ccs	chr2	+	236	1	Intergenic	novelGene_1007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTCCTTCCTTCCTTCC	6744	False	NA	NA	False	AATAAA	-7	NA	119554553	119554789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119554600_119554800
m54284U_201001_173734/159515616/ccs	chr10	+	1566	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	3145	-870	3145	870	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGACGTGGAAGCTGGT	NA	False	NA	NA	False	AATAGA	-13	NA	12884231	12885797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_12884200_12885800
m54284U_201001_173734/159909952/ccs	chr6	-	177	1	Intergenic	novelGene_3430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGATATCTGATTC	NA	False	NA	NA	False	NA	NA	NA	115714850	115714673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_115714700_115714800
m54284U_201001_173734/15992338/ccs	chr12	+	209	1	Intergenic	novelGene_6853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCTAGTTTCATAAAAC	NA	False	NA	NA	False	NA	NA	NA	101003314	101003523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_101003300_101003500
m54284U_201001_173734/15993415/ccs	chr19	+	187	1	Intergenic	novelGene_9240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAACAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	37660945	37661132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_37660900_37661100
m54284U_201001_173734/160238170/ccs	chr5	-	175	1	Intergenic	novelGene_2700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATTTAAAGTAAAC	NA	False	NA	NA	False	NA	NA	NA	100997245	100997070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_100997100_100997200
m54284U_201001_173734/160368454/ccs	chr6	+	173	1	Intergenic	novelGene_3416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGGCTTCTTAGATT	NA	False	NA	NA	False	NA	NA	NA	103721307	103721480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_103721300_103721500
m54284U_201001_173734/160499426/ccs	chr13	+	173	1	Intergenic	novelGene_7171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACTGCCATG	NA	False	NA	NA	False	NA	NA	NA	65179358	65179531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_65179400_65179500
m54284U_201001_173734/160565531/ccs	chr5	+	185	1	Antisense	novelGene_ENSMUSG00000067010.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAGCATTCATTCATAC	NA	False	NA	NA	False	NA	NA	NA	109140494	109140679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_109140500_109140700
m54284U_201001_173734/161153952/ccs	chr9	-	230	1	Intergenic	novelGene_4830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTCCTGGATTTCTC	NA	False	NA	NA	False	NA	NA	NA	59512727	59512497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_59512500_59512700
m54284U_201001_173734/161155492/ccs	chr9	+	175	1	Intergenic	novelGene_4714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAAAATATACT	NA	False	NA	NA	False	NA	NA	NA	39427904	39428079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_39427900_39428100
m54284U_201001_173734/161285466/ccs	chr7	+	113	1	FSM	ENSMUSG00000119845.1	ENSMUST00000239991.1	107	1	0	-6	0	6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATAGACTAACAAACTGG	NA	False	NA	NA	False	NA	NA	NA	104072480	104072593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_104072500_104072600
m54284U_201001_173734/161677687/ccs	chr4	+	218	1	Intergenic	novelGene_2077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGTTACTAACTTCTT	NA	False	NA	NA	False	NA	NA	NA	120865155	120865373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_120865200_120865400
m54284U_201001_173734/161745208/ccs	chr7	+	253	1	Intergenic	novelGene_3863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAAGCATTGCTAACA	682	False	NA	NA	False	NA	NA	NA	49372927	49373180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_49372900_49373200
m54284U_201001_173734/161809994/ccs	chr9	+	176	1	Intergenic	novelGene_5032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAATGTCCAAAAGT	NA	False	NA	NA	False	NA	NA	NA	99468849	99469025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_99468800_99469000
m54284U_201001_173734/16187396/ccs	chr16	+	156	1	Intergenic	novelGene_8045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	8605622	8605778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_8605600_8605800
m54284U_201001_173734/162005810/ccs	chr15	+	176	1	Intergenic	novelGene_7896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAACAATAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	88265369	88265545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_88265400_88265500
m54284U_201001_173734/162006890/ccs	chr7	+	172	1	Intergenic	novelGene_3722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAGACCAAAC	NA	False	NA	NA	False	NA	NA	NA	27014527	27014699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_27014500_27014700
m54284U_201001_173734/162071113/ccs	chr2	-	182	1	Intergenic	novelGene_948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTGTTTTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	92146256	92146074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_92146100_92146300
m54284U_201001_173734/162071341/ccs	chr4	-	917	1	Intergenic	novelGene_2328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAATTCCCTATGCTTT	NA	False	NA	NA	False	AATAAA	-35	NA	145165551	145164634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_145164600_145165600
m54284U_201001_173734/162661816/ccs	chr14	-	190	1	Intergenic	novelGene_7468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAGATTGCTAAAGAAT	3112	False	NA	NA	False	NA	NA	NA	55678685	55678495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_55678500_55678700
m54284U_201001_173734/162858277/ccs	chr1	-	194	1	Intergenic	novelGene_376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTGAAAGCTATT	NA	False	NA	NA	False	NA	NA	NA	151533676	151533482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_151533500_151533700
m54284U_201001_173734/162858306/ccs	chr9	+	214	1	Intergenic	novelGene_4802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGTAAAGGTTAGACGC	NA	False	NA	NA	False	NA	NA	NA	57556257	57556471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_57556300_57556500
m54284U_201001_173734/163382091/ccs	chr2	+	796	1	Intergenic	novelGene_1191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3971	False	NA	NA	False	NA	NA	NA	157396707	157397503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_157396700_157397500
m54284U_201001_173734/16385326/ccs	chr4	-	167	1	Intergenic	novelGene_1959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1901	False	NA	NA	False	NA	NA	NA	101251707	101251540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_101251500_101251700
m54284U_201001_173734/163905728/ccs	chr17	+	193	1	Intergenic	novelGene_8789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGACACCTGCTATATA	NA	False	NA	NA	False	NA	NA	NA	93530670	93530863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_93530700_93530900
m54284U_201001_173734/1639226/ccs	chr15	+	190	1	Intergenic	novelGene_7954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCTGAGGCAGGAGAAT	NA	False	NA	NA	False	NA	NA	NA	98905854	98906044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98905900_98906000
m54284U_201001_173734/164037604/ccs	chr11	+	213	1	Intergenic	novelGene_5972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGTGAGCTG	NA	False	NA	NA	False	NA	NA	NA	72189214	72189427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_72189200_72189400
m54284U_201001_173734/164169067/ccs	chr11	+	192	1	Intergenic	novelGene_5862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAGCCTAACTTCATTG	2507	False	NA	NA	False	NA	NA	NA	57834220	57834412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_57834200_57834400
m54284U_201001_173734/164234715/ccs	chr14	-	177	1	Intergenic	novelGene_7466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55359354	55359177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_55359200_55359400
m54284U_201001_173734/164299340/ccs	chr2	-	176	1	Antisense	novelGene_ENSMUSG00000085830.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATCTGAAAAAT	7694	False	NA	NA	False	NA	NA	NA	25189097	25188921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_25188900_25189100
m54284U_201001_173734/164430568/ccs	chr2	-	225	1	Intergenic	novelGene_1315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGGAAATCAAGG	NA	False	NA	NA	False	NA	NA	NA	179939635	179939410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_179939400_179939600
m54284U_201001_173734/164498096/ccs	chr6	+	182	1	Intergenic	novelGene_3570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAAGACTGT	NA	False	NA	NA	False	NA	NA	NA	142446335	142446517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_142446300_142446500
m54284U_201001_173734/164561423/ccs	chr16	+	155	1	Intergenic	novelGene_8099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	NA	False	NA	NA	False	NA	NA	NA	17089282	17089437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17089300_17089400
m54284U_201001_173734/165413439/ccs	chr4	-	177	1	Intergenic	novelGene_2179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATAGGTGC	NA	False	NA	NA	False	NA	NA	NA	131625650	131625473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_131625500_131625600
m54284U_201001_173734/165413881/ccs	chr5	+	318	1	Intergenic	novelGene_2737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	108117914	108118232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108117900_108118200
m54284U_201001_173734/165677074/ccs	chr2	+	182	1	Intergenic	novelGene_1310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAGAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	179635808	179635990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_179635800_179636000
m54284U_201001_173734/16582657/ccs	chr18	+	175	1	Intergenic	novelGene_8918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCATCTGGTTTTAC	4451	False	NA	NA	False	NA	NA	NA	37324838	37325013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_37324800_37325000
m54284U_201001_173734/165938380/ccs	chr6	+	179	1	Intergenic	novelGene_3278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAATAATAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	52461006	52461185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_52461000_52461200
m54284U_201001_173734/166265182/ccs	chr2	-	180	1	Intergenic	novelGene_862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAACAAAAAGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	73561877	73561697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_73561700_73561900
m54284U_201001_173734/166529132/ccs	chr9	-	181	1	FSM	ENSMUSG00000111088.2	ENSMUST00000217460.2	818	1	637	0	637	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGAGTATTCATGTG	NA	False	NA	NA	False	NA	NA	NA	44290110	44289929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_44289900_44290100
m54284U_201001_173734/166593649/ccs	chr11	+	177	1	Intergenic	novelGene_6210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	1141	False	NA	NA	False	NA	NA	NA	94215973	94216150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94216000_94216200
m54284U_201001_173734/166594786/ccs	chr17	+	184	1	Intergenic	novelGene_8740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGGAGGTTAAGTGG	NA	False	NA	NA	False	NA	NA	NA	80498394	80498578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_80498400_80498600
m54284U_201001_173734/166791150/ccs	chr11	+	187	1	Intergenic	novelGene_6111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGACCAGACATAGTGG	2583	False	NA	NA	False	NA	NA	NA	80303460	80303647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_80303500_80303600
m54284U_201001_173734/166922352/ccs	chr3	+	192	1	Intergenic	novelGene_1708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGCTGTTGAACAATTT	NA	False	NA	NA	False	NA	NA	NA	140464967	140465159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_140465000_140465200
m54284U_201001_173734/166922873/ccs	chr4	+	186	1	Intergenic	novelGene_2410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCCACAGTGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	152241189	152241375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_152241200_152241400
m54284U_201001_173734/167182848/ccs	chr4	-	194	1	Intergenic	novelGene_1984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTCTGAGTTAAAGTG	970	False	NA	NA	False	NA	NA	NA	107802715	107802521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_107802500_107802700
m54284U_201001_173734/167250075/ccs	chr2	+	2330	1	Antisense	novelGene_ENSMUSG00000027122.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAGAAACTCAA	NA	False	NA	NA	False	NA	NA	NA	106799428	106801758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_106799400_106801800
m54284U_201001_173734/167314903/ccs	chr9	+	181	1	Intergenic	novelGene_4678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATATATACCATTTTC	NA	False	NA	NA	False	NA	NA	NA	22653930	22654111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_22653900_22654100
m54284U_201001_173734/167445570/ccs	chr5	+	199	1	Intergenic	novelGene_2516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTATGCCTACAAG	3176	False	NA	NA	False	NA	NA	NA	31183372	31183571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_31183400_31183600
m54284U_201001_173734/167510099/ccs	chr16	+	2450	1	Genic_Genomic	ENSMUSG00000053062.17	novel	NA	NA	NA	NA	14520	448	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATACTATGCTTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	84620814	84623264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_+_84620800_84623300
m54284U_201001_173734/167510534/ccs	chr5	-	1270	1	FSM	ENSMUSG00000094708.2	ENSMUST00000180167.2	1002	1	-62	-206	-62	206	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCACTGTAGAGCTGGA	NA	False	NA	NA	False	AATAAA	-40	NA	106011630	106010360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_106010400_106011600
m54284U_201001_173734/167575597/ccs	chr17	+	203	1	Intergenic	novelGene_8490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATTGTGTAGGTATGTG	NA	False	NA	35	True	NA	NA	NA	29577205	29577408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29577200_29577400
m54284U_201001_173734/167575965/ccs	chr15	+	3736	1	NIC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	20728	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTCCAAAAGTGGTTC	NA	False	NA	14	True	AATAAA	-15	NA	97279825	97283561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_97279800_97283600
m54284U_201001_173734/167576128/ccs	chr7	-	176	1	Intergenic	novelGene_3660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTGAAACTCTGCTT	NA	False	NA	NA	False	NA	NA	NA	14279201	14279025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_14279000_14279200
m54284U_201001_173734/167642701/ccs	chr11	-	5022	15	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	6892	394	-2568	-394	3prime_fragment	FALSE	canonical	1	1	junction_14	7.51630879881765	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAATAAATAAA	NA	False	NA	-42	True	NA	NA	NA	69297609	69289727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831_69297000_69297084_69297436_69297522
m54284U_201001_173734/167969734/ccs	chr15	-	177	1	Intergenic	novelGene_7773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGTAAATCTTGAAAAAA	8593	False	NA	NA	False	NA	NA	NA	76200498	76200321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76200300_76200500
m54284U_201001_173734/16843375/ccs	chr3	+	2879	1	NIC	ENSMUSG00000015749.13	novel	3274	7	NA	NA	0	-5000	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATCTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95836594	95839473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95836600_95839500
m54284U_201001_173734/168690130/ccs	chr10	+	206	1	Intergenic	novelGene_5491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGTAGAAAAAGCAATAAA	NA	False	NA	NA	False	AAGAAA	-8	NA	88623634	88623840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_88623600_88623800
m54284U_201001_173734/169084237/ccs	chr2	-	1786	1	NIC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	4763	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	4581	False	NA	-4	True	AATAAA	-29	NA	152181127	152179341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_152179300_152181100
m54284U_201001_173734/169085267/ccs	chr9	+	232	1	Intergenic	novelGene_4729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTAACTATATACAAAG	NA	False	NA	NA	False	AATAAA	-29	NA	43973639	43973871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_43973600_43973900
m54284U_201001_173734/16909677/ccs	chr5	+	2074	1	Antisense	novelGene_ENSMUSG00000038295.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGGCAAAGGATGGGC	4951	False	NA	NA	False	NA	NA	NA	24592102	24594176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_24592100_24594200
m54284U_201001_173734/169345142/ccs	chr4	+	172	1	Intergenic	novelGene_1768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAACATCTGTTGGATGT	5040	False	NA	NA	False	NA	NA	NA	21754745	21754917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_21754700_21754900
m54284U_201001_173734/169476600/ccs	chr4	-	2459	1	NIC	ENSMUSG00000040128.10	novel	1648	2	NA	NA	-306	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGGCTTTTTGTGTGTG	856	False	NA	2	True	TTTAAA	-38	NA	33247881	33245422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_33245400_33247900
m54284U_201001_173734/169476605/ccs	chr7	+	160	1	Intergenic	novelGene_3941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTAAAAAAAGATATTG	NA	False	NA	NA	False	NA	NA	NA	86008292	86008452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_86008300_86008500
m54284U_201001_173734/169674588/ccs	chr18	+	189	1	Intergenic	novelGene_8852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAACTTAATACCATAA	NA	False	NA	NA	False	NA	NA	NA	31509891	31510080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_31509900_31510100
m54284U_201001_173734/1706342/ccs	chr14	+	180	1	Intergenic	novelGene_7443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGTCAATTCTTCTG	NA	False	NA	NA	False	NA	NA	NA	52367429	52367609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_52367400_52367600
m54284U_201001_173734/170852495/ccs	chr5	+	177	1	Intergenic	novelGene_2558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35909494	35909671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_35909500_35909700
m54284U_201001_173734/170985243/ccs	chr11	-	176	1	Intergenic	novelGene_5901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGTAGAA	NA	False	NA	NA	False	NA	NA	NA	61728936	61728760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_61728800_61728900
m54284U_201001_173734/17106059/ccs	chr7	+	5053	1	Antisense	novelGene_ENSMUSG00000030655.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGAGCAAGAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	117741190	117746243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_117741200_117746200
m54284U_201001_173734/171117148/ccs	chr19	+	176	1	Intergenic	novelGene_9128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1596	False	NA	NA	False	NA	NA	NA	6978108	6978284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6978100_6978300
m54284U_201001_173734/171574443/ccs	chr18	-	198	1	Intergenic	novelGene_8911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTAGCACAAACTAAGG	NA	False	NA	NA	False	NA	NA	NA	36401139	36400941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36400900_36401100
m54284U_201001_173734/17171584/ccs	chr7	+	182	1	Intergenic	novelGene_3664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAACAAACTGATC	NA	False	NA	NA	False	NA	NA	NA	15622499	15622681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_15622500_15622700
m54284U_201001_173734/172163385/ccs	chr8	+	188	1	Intergenic	novelGene_4534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATTTGTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118200549	118200737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_118200500_118200700
m54284U_201001_173734/172359750/ccs	chr4	-	189	1	Intergenic	novelGene_1899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCATGTTTTATTCATG	NA	False	NA	NA	False	NA	NA	NA	69216394	69216205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_69216200_69216400
m54284U_201001_173734/17236158/ccs	chr12	-	176	1	Intergenic	novelGene_6662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAGCACTGA	8391	False	NA	-8	True	NA	NA	NA	59086183	59086007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_59086000_59086200
m54284U_201001_173734/172361754/ccs	chr4	-	176	1	Intergenic	novelGene_2388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTTAAATGCAC	NA	False	NA	NA	False	NA	NA	NA	149598329	149598153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_149598200_149598300
m54284U_201001_173734/172425719/ccs	chr3	+	200	1	Intergenic	novelGene_1716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCTTTGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	145679550	145679750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_145679600_145679800
m54284U_201001_173734/172492021/ccs	chr11	-	171	1	Intergenic	novelGene_6397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCCTCAGGCTACTGAG	NA	False	NA	NA	False	NA	NA	NA	106761031	106760860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106760900_106761000
m54284U_201001_173734/172753471/ccs	chr7	+	189	1	Intergenic	novelGene_3964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGAAGAGTTGTGGGTCT	NA	False	NA	NA	False	NA	NA	NA	98478751	98478940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_98478800_98478900
m54284U_201001_173734/173212424/ccs	chr10	-	171	1	Intergenic	novelGene_5600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGAGGT	9021	False	NA	NA	False	NA	NA	NA	127051341	127051170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127051200_127051300
m54284U_201001_173734/174260680/ccs	chr6	+	225	1	Intergenic	novelGene_3428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTGGCACATGGTAGTC	NA	False	NA	NA	False	NA	NA	NA	115471556	115471781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_115471600_115471800
m54284U_201001_173734/174328501/ccs	chr13	+	186	1	Intergenic	novelGene_7222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAGATAACCTTACT	NA	False	NA	NA	False	NA	NA	NA	81895259	81895445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_81895300_81895400
m54284U_201001_173734/17434695/ccs	chr13	+	807	1	FSM	ENSMUSG00000021728.9	ENSMUST00000224455.2	2136	1	1329	0	1329	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCATTGTTTTCTAGCA	NA	False	NA	NA	False	NA	NA	NA	117365890	117366697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_117365900_117366700
m54284U_201001_173734/174786929/ccs	chr2	+	179	1	Intergenic	novelGene_829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGAAGAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	69518674	69518853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69518700_69518900
m54284U_201001_173734/174918048/ccs	chr2	-	194	1	Intergenic	novelGene_807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACATCAATAAAAAGATGT	NA	False	NA	NA	False	NA	NA	NA	59967584	59967390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_59967400_59967600
m54284U_201001_173734/17498231/ccs	chr9	+	204	1	Intergenic	novelGene_4889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATAAGACAGAATCA	NA	False	NA	NA	False	NA	NA	NA	65713654	65713858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_65713700_65713900
m54284U_201001_173734/175049247/ccs	chrX	-	194	1	Intergenic	novelGene_9596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATAGGCACAGCC	9184	False	NA	NA	False	NA	NA	NA	103468960	103468766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_103468800_103469000
m54284U_201001_173734/175375327/ccs	chr5	+	185	1	Intergenic	novelGene_2781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAGAAAAAAAGAGCT	7819	False	NA	NA	False	NA	NA	NA	113836727	113836912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_113836700_113836900
m54284U_201001_173734/175375681/ccs	chr9	-	186	1	Intergenic	novelGene_4640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGGAATAACTCTAAGAC	NA	False	NA	NA	False	NA	NA	NA	15213607	15213421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_15213400_15213600
m54284U_201001_173734/175441300/ccs	chr13	+	176	1	Intergenic	novelGene_7229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAATGTACTTC	NA	False	NA	NA	False	NA	NA	NA	91348893	91349069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_91348900_91349100
m54284U_201001_173734/175442528/ccs	chr2	+	1054	1	Antisense	novelGene_ENSMUSG00000027641.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	157019198	157020252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_157019200_157020300
m54284U_201001_173734/17564846/ccs	chr16	+	193	1	Intergenic	novelGene_8292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAAAACAAAAAACCAAAAT	NA	False	NA	NA	False	NA	NA	NA	64696021	64696214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_64696000_64696200
m54284U_201001_173734/17565993/ccs	chr15	+	158	1	Intergenic	novelGene_7733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTTTTCTTTTATAAGAT	NA	False	NA	NA	False	NA	NA	NA	58752801	58752959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_58752800_58753000
m54284U_201001_173734/175702812/ccs	chr2	-	186	1	Intergenic	novelGene_1244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTTTAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	166850309	166850123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166850100_166850300
m54284U_201001_173734/175703368/ccs	chr17	+	224	1	Intergenic	novelGene_8351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAGGAAGA	6988	False	NA	NA	False	NA	NA	NA	6680407	6680631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_6680400_6680600
m54284U_201001_173734/175964748/ccs	chr10	+	189	1	Intergenic	novelGene_5348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GATTAAAAAAAAAGAAAAAC	3600	False	NA	NA	False	NA	NA	NA	62436252	62436441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62436300_62436400
m54284U_201001_173734/175966578/ccs	chr16	+	204	1	Intergenic	novelGene_8322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAAAAGTGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	90781692	90781896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_90781700_90781900
m54284U_201001_173734/176161373/ccs	chr2	-	180	1	Intergenic	novelGene_1260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACACACAAACCAATATT	6203	False	NA	NA	False	NA	NA	NA	168224923	168224743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168224700_168224900
m54284U_201001_173734/176489043/ccs	chr11	-	3854	1	Intergenic	novelGene_5905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCCAACAAGCAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	62358120	62354266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_62354300_62358100
m54284U_201001_173734/176490941/ccs	chr15	+	178	1	Intergenic	novelGene_7767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAATTATTGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	75858424	75858602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_75858400_75858600
m54284U_201001_173734/176621814/ccs	chr6	+	163	1	Intergenic	novelGene_3351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTCCATTTCTTGGC	NA	False	NA	NA	False	NA	NA	NA	83913330	83913493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_83913300_83913500
m54284U_201001_173734/176752824/ccs	chr11	+	187	1	Intergenic	novelGene_6521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAACAGAAACCTT	NA	False	NA	NA	False	NA	NA	NA	120822857	120823044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120822900_120823000
m54284U_201001_173734/176817076/ccs	chr11	+	171	1	Intergenic	novelGene_5706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTAAATCTCT	NA	False	NA	NA	False	NA	NA	NA	17188804	17188975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_17188800_17189000
m54284U_201001_173734/177080305/ccs	chr8	+	170	1	Intergenic	novelGene_4347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAAATAGTATGTGGT	NA	False	NA	NA	False	NA	NA	NA	75701074	75701244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_75701100_75701200
m54284U_201001_173734/177144177/ccs	chr7	+	324	1	Intergenic	novelGene_3652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATGATCAATCTCTGT	NA	False	NA	NA	False	NA	NA	NA	12668483	12668807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_12668500_12668800
m54284U_201001_173734/177277177/ccs	chr8	-	198	1	Intergenic	novelGene_4457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACATAAAATAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	106898224	106898026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106898000_106898200
m54284U_201001_173734/177538486/ccs	chr2	+	175	1	Intergenic	novelGene_844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAAGCCTATG	NA	False	NA	NA	False	NA	NA	NA	70530590	70530765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_70530600_70530800
m54284U_201001_173734/177669251/ccs	chr4	+	180	1	Intergenic	novelGene_2278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAACCATTATCTTC	4102	False	NA	NA	False	NA	NA	NA	138130605	138130785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_138130600_138130800
m54284U_201001_173734/177734371/ccs	chr14	-	4123	22	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	-238	0	intron_retention	FALSE	canonical	0	0	junction_21	9.9968248927601	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45458023	45372363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673_45457009_45457626
m54284U_201001_173734/177800028/ccs	chr9	+	2700	1	Genic_Genomic	ENSMUSG00000001833.18	novel	NA	NA	NA	NA	2467	1864	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATAGCTGGAAGTGCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	25219031	25221731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_25219000_25221700
m54284U_201001_173734/177800369/ccs	chr16	+	171	1	Intergenic	novelGene_8261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTAAAAAACGTACAA	NA	False	NA	NA	False	NA	NA	NA	43884035	43884206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_43884000_43884200
m54284U_201001_173734/17826781/ccs	chr12	+	187	1	Intergenic	novelGene_6567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGTTGTTTCAAAACC	NA	False	NA	NA	False	NA	NA	NA	12330008	12330195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_12330000_12330200
m54284U_201001_173734/178455639/ccs	chr16	+	188	1	Intergenic	novelGene_8188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGAAACTTTCTAAAAG	NA	False	NA	NA	False	NA	NA	NA	30954822	30955010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_30954800_30955000
m54284U_201001_173734/178979025/ccs	chr10	+	2005	1	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	-196	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAATTTAAAATAAAACTA	2289	False	NA	NA	False	NA	NA	NA	79795988	79797993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79796000_79798000
m54284U_201001_173734/178980161/ccs	chrX	+	172	1	Intergenic	novelGene_9362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	6377299	6377471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_6377300_6377500
m54284U_201001_173734/179766440/ccs	chr2	-	3413	1	NIC	ENSMUSG00000026923.16	novel	9488	34	NA	NA	1432	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGTGTGGTTTGGTTC	9566	False	NA	0	True	AATAAA	-34	NA	26351327	26347914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26347900_26351300
m54284U_201001_173734/179766597/ccs	chr14	+	207	1	Intergenic	novelGene_7486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCACATTGTGTACTT	NA	False	NA	NA	False	NA	NA	NA	57628439	57628646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_57628400_57628600
m54284U_201001_173734/179962194/ccs	chr9	+	199	1	Intergenic	novelGene_5156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATCAGTTCCTGCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	121198164	121198363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_121198200_121198400
m54284U_201001_173734/180094736/ccs	chr17	+	187	1	Intergenic	novelGene_8520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCAGATGATGTTA	3167	False	NA	NA	False	NA	NA	NA	32455918	32456105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32455900_32456100
m54284U_201001_173734/180095607/ccs	chr15	+	177	1	Intergenic	novelGene_7816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTTTGACTTTGGCCTT	NA	False	NA	NA	False	GGGGCT	-15	NA	79580163	79580340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_79580200_79580300
m54284U_201001_173734/180161256/ccs	chr8	-	2963	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	65	-162	intron_retention	FALSE	canonical	3	2132	junction_1	14.9888847706114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720211	117708710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_117709466_117710546_117710679_117714051_117715943_117720026
m54284U_201001_173734/180224874/ccs	chr1	+	1576	1	Intergenic	novelGene_527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATCTGTACGTGTGTG	2278	False	NA	NA	False	TTTAAA	-23	NA	181856050	181857626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_181856000_181857600
m54284U_201001_173734/180486540/ccs	chr8	+	200	1	Intergenic	novelGene_4570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGTAAAGAAAAGAA	9378	False	NA	NA	False	NA	NA	NA	123290354	123290554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_123290400_123290600
m54284U_201001_173734/18219426/ccs	chr11	+	165	1	Intergenic	novelGene_6476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTATTTTATTTTTT	NA	False	NA	13	True	NA	NA	NA	116516699	116516864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_116516700_116516900
m54284U_201001_173734/18221491/ccs	chr2	+	2477	1	Intergenic	novelGene_846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACCACCACCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70872875	70875352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_70872900_70875400
m54284U_201001_173734/18286791/ccs	chr4	-	176	1	Intergenic	novelGene_1854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAAGGTGCTA	NA	False	NA	NA	False	NA	NA	NA	48082038	48081862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_48081900_48082000
m54284U_201001_173734/18351041/ccs	chr7	+	181	1	Intergenic	novelGene_4010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAAAAAAACTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	109267282	109267463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109267300_109267500
m54284U_201001_173734/18483189/ccs	chr17	-	307	1	Intergenic	novelGene_8440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGGAAGAATGTGGATT	177	False	NA	NA	False	NA	NA	NA	27133738	27133431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_27133400_27133700
m54284U_201001_173734/18613723/ccs	chr18	+	2378	1	NIC	ENSMUSG00000033107.7	novel	1348	6	NA	NA	0	-36722	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	5341	False	NA	NA	False	NA	NA	NA	21077681	21080059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_21077700_21080100
m54284U_201001_173734/18743726/ccs	chrX	-	199	1	Intergenic	novelGene_9672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAGGTTGGTAAACACA	9029	False	NA	NA	False	NA	NA	NA	150805263	150805064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_150805100_150805300
m54284U_201001_173734/18875038/ccs	chr10	+	207	1	Intergenic	novelGene_5565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	119089100	119089307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_119089100_119089300
m54284U_201001_173734/19269139/ccs	chr4	-	778	1	Antisense	novelGene_ENSMUSG00000028850.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTACATATCTGGTTT	NA	False	NA	NA	False	AGTAAA	-24	NA	133311630	133310852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_133310900_133311600
m54284U_201001_173734/19660899/ccs	chr7	+	230	1	Intergenic	novelGene_3996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTTGTTTCCTTCTTGC	443	False	NA	NA	False	AAAAAG	-34	NA	102066197	102066427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_102066200_102066400
m54284U_201001_173734/1966592/ccs	chr2	+	3767	1	NIC	ENSMUSG00000027331.16	novel	4602	9	NA	NA	-634	64	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTCAAAAGACTTCTCA	179	False	NA	15	True	ATTAAA	-15	NA	118663921	118667688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_118663900_118667700
m54284U_201001_173734/198318/ccs	chr15	+	186	1	ISM	ENSMUSG00000091050.2	ENSMUST00000163781.2	2147	2	1027	1047	1027	-1047	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGTAAAGGGGTCTTTTT	9844	False	NA	NA	False	NA	NA	NA	98466231	98466417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_98466200_98466400
m54284U_201001_173734/20056234/ccs	chr10	+	1133	1	Intergenic	novelGene_5378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68063670	68064803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_68063700_68064800
m54284U_201001_173734/20121518/ccs	chr11	-	185	1	Intergenic	novelGene_6069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTGCTGGCTTACACC	NA	False	NA	NA	False	NA	NA	NA	78323218	78323033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_78323000_78323200
m54284U_201001_173734/20122281/ccs	chr17	+	226	1	Intergenic	novelGene_8731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTGTTGCCAGGCGGTG	NA	False	NA	NA	False	AAAAAG	-24	NA	75268938	75269164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_75268900_75269200
m54284U_201001_173734/20252498/ccs	chr13	+	143	1	Intergenic	novelGene_7046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTAAAAAAAGAATGATT	9405	False	NA	NA	False	NA	NA	NA	44829367	44829510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_44829400_44829500
m54284U_201001_173734/20316191/ccs	chr7	-	175	1	Intergenic	novelGene_4122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAATCTAAAACT	NA	False	NA	NA	False	NA	NA	NA	130153259	130153084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_130153100_130153300
m54284U_201001_173734/20317814/ccs	chr9	-	157	1	Intergenic	novelGene_4995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAAAAGTTTGCCGGG	NA	False	NA	NA	False	NA	NA	NA	88983857	88983700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_88983700_88983900
m54284U_201001_173734/2033401/ccs	chr17	+	177	1	Intergenic	novelGene_8374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGTAGTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	13796467	13796644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_13796500_13796600
m54284U_201001_173734/20514260/ccs	chrX	+	175	1	Intergenic	novelGene_9595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTCATGTTTATT	NA	False	NA	NA	False	NA	NA	NA	103467554	103467729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_103467600_103467700
m54284U_201001_173734/20514970/ccs	chr6	-	173	1	Intergenic	novelGene_3466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGGGGGGGGTTGGAG	NA	False	NA	NA	False	NA	NA	NA	120660353	120660180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120660200_120660400
m54284U_201001_173734/20711722/ccs	chr7	+	198	1	Intergenic	novelGene_3920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTTCCAGTACAGCCAG	4248	False	NA	NA	False	NA	NA	NA	80202844	80203042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_80202800_80203000
m54284U_201001_173734/20775617/ccs	chr8	+	173	1	Intergenic	novelGene_4392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	87500982	87501155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_87501000_87501200
m54284U_201001_173734/20972392/ccs	chr1	-	196	1	Intergenic	novelGene_257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAATTTGAAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	93814018	93813822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_93813800_93814000
m54284U_201001_173734/20973992/ccs	chr11	+	188	1	Antisense	novelGene_ENSMUSG00000020718.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACTTGACAGTACTCT	NA	False	NA	NA	False	NA	NA	NA	106662730	106662918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_106662700_106662900
m54284U_201001_173734/2098469/ccs	chr17	-	1948	1	NIC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	0	-104022	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	10538309	10536361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_10536400_10538300
m54284U_201001_173734/21038539/ccs	chr5	+	183	1	Intergenic	novelGene_2657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGATTGTTCATAAA	NA	False	NA	NA	False	NA	NA	NA	90558522	90558705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_90558500_90558700
m54284U_201001_173734/21103591/ccs	chr12	+	184	1	Intergenic	novelGene_6849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTCTATTGTCA	NA	False	NA	NA	False	NA	NA	NA	100568882	100569066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_100568900_100569100
m54284U_201001_173734/21234350/ccs	chr9	-	175	1	Intergenic	novelGene_4752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTTGTGATTCTTTGA	NA	False	NA	NA	False	NA	NA	NA	48395778	48395603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_48395600_48395800
m54284U_201001_173734/21365725/ccs	chr1	+	197	1	Intergenic	novelGene_362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCACAAGTAAGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	139338843	139339040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_139338800_139339000
m54284U_201001_173734/21432225/ccs	chr5	+	201	1	Intergenic	novelGene_2531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAATCTTCAAGTGCT	2538	False	NA	NA	False	NA	NA	NA	32981681	32981882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_32981700_32981900
m54284U_201001_173734/2164831/ccs	chr15	+	198	1	Intergenic	novelGene_7761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAAGGCTCCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	75419845	75420043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_75419800_75420000
m54284U_201001_173734/21694918/ccs	chr10	+	188	1	Intergenic	novelGene_5493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGAAGCAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	89571515	89571703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_89571500_89571700
m54284U_201001_173734/21823497/ccs	chr1	+	185	1	Intergenic	novelGene_274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAGAAAGAAAATGTAC	NA	False	NA	NA	False	NA	NA	NA	118505190	118505375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_118505200_118505400
m54284U_201001_173734/21824000/ccs	chr6	+	164	1	Intergenic	novelGene_3179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCTACATGAGTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	37384503	37384667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_37384500_37384700
m54284U_201001_173734/21824396/ccs	chr9	-	180	1	Intergenic	novelGene_5087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAGGATTTGAA	4587	False	NA	NA	False	NA	NA	NA	108354508	108354328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_108354300_108354500
m54284U_201001_173734/22021902/ccs	chr3	-	183	1	Intergenic	novelGene_1687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTATTATATTTATTT	NA	False	NA	NA	False	NA	NA	NA	130992205	130992022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_130992000_130992200
m54284U_201001_173734/2229028/ccs	chr12	-	251	1	Genic_Genomic	ENSMUSG00000112505.2	novel	NA	NA	NA	NA	4185	80	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGTTTTAAAACAAGTGA	NA	False	NA	NA	False	NA	NA	NA	4622571	4622320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_-_4622300_4622600
m54284U_201001_173734/22414106/ccs	chr2	+	179	1	Intergenic	novelGene_610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATAGTACTCATAC	NA	False	NA	NA	False	NA	NA	NA	18969329	18969508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_18969300_18969500
m54284U_201001_173734/22415165/ccs	chr12	-	170	1	Intergenic	novelGene_6686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTAAATCCC	NA	False	NA	NA	False	NA	NA	NA	69619974	69619804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_69619800_69620000
m54284U_201001_173734/22415426/ccs	chr2	+	151	1	Intergenic	novelGene_1188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	157051862	157052013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_157051900_157052000
m54284U_201001_173734/22675988/ccs	chr4	+	148	1	Intergenic	novelGene_1804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	40131548	40131696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_40131500_40131700
m54284U_201001_173734/23003595/ccs	chr7	-	165	1	Intergenic	novelGene_3897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTGAATTGACCCACC	NA	False	NA	NA	False	NA	NA	NA	75480168	75480003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_75480000_75480200
m54284U_201001_173734/23003814/ccs	chr11	-	158	1	Intergenic	novelGene_5786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	44639134	44638976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_44639000_44639100
m54284U_201001_173734/23069034/ccs	chr10	-	217	1	Intergenic	novelGene_5314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAGCTGGTTAGTGAG	NA	False	NA	NA	False	TATAAA	-15	NA	59835344	59835127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_59835100_59835300
m54284U_201001_173734/23333264/ccs	chr19	+	346	1	Intergenic	novelGene_9271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAATCTTAAAACAA	8564	False	NA	NA	False	CATAAA	-2	NA	42277254	42277600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_42277300_42277600
m54284U_201001_173734/23333286/ccs	chr10	+	213	1	Intergenic	novelGene_5459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGTGTTGATGCTCGA	NA	False	NA	NA	False	NA	NA	NA	80952691	80952904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80952700_80952900
m54284U_201001_173734/23462875/ccs	chr1	+	185	1	Intergenic	novelGene_172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAATGTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71875638	71875823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_71875600_71875800
m54284U_201001_173734/23529204/ccs	chr8	+	2121	11	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	435.634066620139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8827	False	NA	39	True	AATAAA	-21	NA	120637552	120684299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_120637679_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
m54284U_201001_173734/23595611/ccs	chr10	+	186	1	Intergenic	novelGene_5341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTACACCTCTGTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	61883461	61883647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61883500_61883600
m54284U_201001_173734/23659185/ccs	chr6	+	191	1	Intergenic	novelGene_3412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGTGGAGTACAGCTAG	NA	False	NA	NA	False	NA	NA	NA	100201581	100201772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_100201600_100201800
m54284U_201001_173734/23660877/ccs	chr17	+	181	1	Intergenic	novelGene_8526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTTTTCTTCTTCTTC	143	False	NA	NA	False	NA	NA	NA	32538503	32538684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32538500_32538700
m54284U_201001_173734/23725694/ccs	chr4	-	179	1	Intergenic	novelGene_1954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGAAAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	100659941	100659762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_100659800_100659900
m54284U_201001_173734/23726436/ccs	chr4	+	183	1	Intergenic	novelGene_2033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATATAACATGGAAAAATT	3601	False	NA	NA	False	NA	NA	NA	116715504	116715687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116715500_116715700
m54284U_201001_173734/23857975/ccs	chr2	-	201	1	Intergenic	novelGene_1316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATCCTTAACATGTCAG	NA	False	NA	NA	False	NA	NA	NA	180355473	180355272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_180355300_180355500
m54284U_201001_173734/24183018/ccs	chr16	+	206	1	Intergenic	novelGene_8025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCATGGATAACCTCAC	NA	False	NA	NA	False	NA	NA	NA	3607789	3607995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_3607800_3608000
m54284U_201001_173734/24380808/ccs	chr16	+	3090	1	ISM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	57985	416	57974	-416	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGACTCCACTGCACCC	NA	False	NA	NA	False	NA	NA	NA	32209059	32212149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_32209100_32212100
m54284U_201001_173734/24512139/ccs	chr15	-	178	1	Intergenic	novelGene_7889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGTACCAATATAT	NA	False	NA	NA	False	NA	NA	NA	85257783	85257605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_85257600_85257800
m54284U_201001_173734/24708787/ccs	chr17	+	175	1	Intergenic	novelGene_8592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCTTTTTTTTATTAT	6544	False	NA	NA	False	NA	NA	NA	39113518	39113693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_39113500_39113700
m54284U_201001_173734/25167129/ccs	chr8	-	1743	3	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	1468.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760070	43748103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43749570_43757512_43757597_43759877
m54284U_201001_173734/25299105/ccs	chr6	+	3213	1	FSM	ENSMUSG00000098623.3	ENSMUST00000184382.3	131	1	30	-3112	30	3112	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAAAGTACCAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	71248684	71251897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_71248700_71251900
m54284U_201001_173734/25299175/ccs	chr13	-	179	1	Intergenic	novelGene_7249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAACAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	96681330	96681151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_96681200_96681300
m54284U_201001_173734/25493700/ccs	chrX	+	173	1	Intergenic	novelGene_9484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAAAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	59301308	59301481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_59301300_59301500
m54284U_201001_173734/25822433/ccs	chr12	+	186	1	Intergenic	novelGene_6667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTAGTTCTGTGGAAGA	3257	False	NA	NA	False	NA	NA	NA	59161545	59161731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_59161500_59161700
m54284U_201001_173734/25822638/ccs	chr2	-	3731	4	Fusion	ENSMUSG00000078905.9_ENSMUSG00000081949.4	novel	625	4	NA	NA	-134	3033	multi-exon	FALSE	canonical	2	11	junction_3	30.0111090542597	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	174951942	174900308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_-_174903715_174905392_174905454_174905660_174905788_174951805
m54284U_201001_173734/2623140/ccs	chr2	+	188	1	Intergenic	novelGene_738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAGGGGAGGGATCAGCC	NA	False	NA	NA	False	NA	NA	NA	33631956	33632144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33632000_33632100
m54284U_201001_173734/26479209/ccs	chr3	+	187	1	FSM	ENSMUSG00000106536.2	ENSMUST00000199972.2	3292	1	246	2859	246	-2859	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCCTTTCTTGTCTTCCA	6921	False	NA	NA	False	NA	NA	NA	97169916	97170103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_97169900_97170100
m54284U_201001_173734/26674088/ccs	chr18	+	177	1	Intergenic	novelGene_8871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTGTT	NA	False	NA	NA	False	NA	NA	NA	34603868	34604045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_34603900_34604000
m54284U_201001_173734/26740990/ccs	chr15	-	158	1	Intergenic	novelGene_8007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAGATAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	102323767	102323609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102323600_102323800
m54284U_201001_173734/2688002/ccs	chr4	+	205	1	Intergenic	novelGene_1789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGCATCATTCTTATTA	NA	False	NA	NA	False	NA	NA	NA	33364713	33364918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_33364700_33364900
m54284U_201001_173734/27002623/ccs	chr17	-	201	1	Intergenic	novelGene_8421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTACAACACACTTGAAAAG	NA	False	NA	NA	False	NA	NA	NA	25148126	25147925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_25147900_25148100
m54284U_201001_173734/27132754/ccs	chr15	+	181	1	Intergenic	novelGene_7814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAATTAA	NA	False	NA	NA	False	NA	NA	NA	79491105	79491286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_79491100_79491300
m54284U_201001_173734/27198041/ccs	chr16	-	4412	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	0	221	at_least_one_novel_splicesite	FALSE	canonical	2	55	junction_22	190.770926259562	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATTGTATATTTAATGA	NA	False	NA	NA	False	NA	NA	NA	8610172	8507788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522970_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
m54284U_201001_173734/27396450/ccs	chr12	+	1982	1	Genic_Genomic	ENSMUSG00000004789.11	novel	NA	NA	NA	NA	2424	1	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCTGGAGTAGCTGTT	NA	False	NA	NA	False	TTTAAA	-11	NA	85179638	85181620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_+_85179600_85181600
m54284U_201001_173734/27460419/ccs	chr15	+	183	1	Intergenic	novelGene_7888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACCCTGATGCCATCTG	NA	False	NA	NA	False	NA	NA	NA	85096882	85097065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_85096900_85097100
m54284U_201001_173734/27656690/ccs	chr15	+	1309	8	NIC	ENSMUSG00000023484.15	novel	1757	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	10.6961751699056	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTTGGTCTGAGGT	94	False	NA	10	True	AATAAA	-22	NA	98953850	98956858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956485
m54284U_201001_173734/27788624/ccs	chr18	+	192	1	Intergenic	novelGene_8811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAACAAACAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	10574474	10574666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_10574500_10574700
m54284U_201001_173734/27789114/ccs	chr14	+	232	1	Intergenic	novelGene_7440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAATACACATGCTGAAA	NA	False	NA	NA	False	NA	NA	NA	52321092	52321324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_52321100_52321300
m54284U_201001_173734/28051797/ccs	chr10	-	3667	12	NIC	ENSMUSG00000042570.15	novel	2562	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_8	75.7991037693151	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390718	79376078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390379
m54284U_201001_173734/28182996/ccs	chr5	+	208	1	Intergenic	novelGene_3034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAATTCTAGGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	142579965	142580173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_142580000_142580200
m54284U_201001_173734/28379865/ccs	chr11	+	178	1	Intergenic	novelGene_6512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATGACTGAAGAA	NA	False	NA	NA	False	NA	NA	NA	120405316	120405494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120405300_120405500
m54284U_201001_173734/28639396/ccs	chr13	+	113	1	Intergenic	novelGene_6965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTCTTATAAAAATACAAC	NA	False	NA	NA	False	NA	NA	NA	10928249	10928362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_10928200_10928400
m54284U_201001_173734/28838673/ccs	chr15	+	180	1	Intergenic	novelGene_7903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGGCACTTATAATA	NA	False	NA	NA	False	NA	NA	NA	88679920	88680100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_88679900_88680100
m54284U_201001_173734/29033318/ccs	chr5	-	181	1	Intergenic	novelGene_2754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTTTCCTATG	568	False	NA	NA	False	NA	NA	NA	109906841	109906660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_109906700_109906800
m54284U_201001_173734/29230075/ccs	chr8	+	179	1	Intergenic	novelGene_4576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAGAAGAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	123828074	123828253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_123828100_123828300
m54284U_201001_173734/29231750/ccs	chr10	+	183	1	Intergenic	novelGene_5589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACTATTCAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	122782688	122782871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_122782700_122782900
m54284U_201001_173734/29295338/ccs	chr3	+	187	1	Intergenic	novelGene_1529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGATCTGTACTGTTTA	NA	False	NA	NA	False	NA	NA	NA	89877561	89877748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89877600_89877700
m54284U_201001_173734/29361749/ccs	chr11	+	188	1	Intergenic	novelGene_6087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGGATATCGTTCCCA	NA	False	NA	NA	False	NA	NA	NA	79734637	79734825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79734600_79734800
m54284U_201001_173734/29493418/ccs	chr11	+	200	1	Intergenic	novelGene_6299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCCTCCTCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	98159974	98160174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98160000_98160200
m54284U_201001_173734/29559609/ccs	chr17	+	210	1	Intergenic	novelGene_8372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCGGGGCCTAGCAAA	NA	False	NA	NA	False	NA	NA	NA	13208676	13208886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_13208700_13208900
m54284U_201001_173734/29950505/ccs	chr7	+	212	1	Intergenic	novelGene_3814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAACGCCTTTTCATATT	NA	False	NA	NA	False	NA	NA	NA	42805447	42805659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_42805400_42805700
m54284U_201001_173734/29951224/ccs	chr1	+	177	1	Intergenic	novelGene_195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGCACAATCACTGCCCA	NA	False	NA	NA	False	NA	NA	NA	75028085	75028262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_75028100_75028300
m54284U_201001_173734/30017972/ccs	chrX	+	217	1	Intergenic	novelGene_9561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTCTAGAGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	100571231	100571448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100571200_100571400
m54284U_201001_173734/30278490/ccs	chr15	+	188	1	Intergenic	novelGene_7753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAGACGCAGAGTCCT	NA	False	NA	NA	False	NA	NA	NA	73310622	73310810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_73310600_73310800
m54284U_201001_173734/30344626/ccs	chr11	-	167	1	Intergenic	novelGene_6037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGATGGCTTG	NA	False	NA	NA	False	NA	NA	NA	76593454	76593287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_76593300_76593500
m54284U_201001_173734/30344920/ccs	chr14	+	175	1	Intergenic	novelGene_7477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAATTCATCTCCAG	NA	False	NA	NA	False	NA	NA	NA	56620719	56620894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_56620700_56620900
m54284U_201001_173734/30607638/ccs	chr2	+	173	1	Intergenic	novelGene_623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATTAGT	8613	False	NA	NA	False	NA	NA	NA	22923285	22923458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_22923300_22923500
m54284U_201001_173734/30607681/ccs	chr6	-	4128	6	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	0	-54	intron_retention	FALSE	canonical	2	3	junction_5	115.229162975351	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATCAACTTGTTTCTG	5265	False	NA	-59	True	AGTAAA	-19	NA	126916550	126900431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_126903481_126904500_126905191_126906955_126907066_126911669_126911813_126912915_126912972_126916470
m54284U_201001_173734/30672034/ccs	chr19	+	2478	1	FSM	ENSMUSG00000094388.2	ENSMUST00000159764.2	522	1	-684	-1272	-684	1272	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTTTGCCTAAAATTAA	NA	False	NA	NA	False	AATAAA	-26	NA	40610219	40612697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_40610200_40612700
m54284U_201001_173734/30803804/ccs	chr10	-	3205	1	Intergenic	novelGene_5175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACTTTGCTGTTAGAAA	NA	False	NA	NA	False	NA	NA	NA	4228880	4225675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_4225700_4228900
m54284U_201001_173734/30867619/ccs	chr14	-	168	1	Intergenic	novelGene_7343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATCATAAGTCACCC	4431	False	NA	NA	False	NA	NA	NA	19871149	19870981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_19871000_19871100
m54284U_201001_173734/30870214/ccs	chr2	-	2264	1	FSM	ENSMUSG00000089762.4	ENSMUST00000065134.4	2683	1	-692	1111	-692	-1111	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAAAAATCT	NA	False	NA	-36	True	TATAAA	-5	NA	30364923	30362659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_30362700_30364900
m54284U_201001_173734/30934664/ccs	chr3	-	165	1	Intergenic	novelGene_1638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAAAATACAAA	NA	False	NA	NA	False	NA	NA	NA	115087731	115087566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_115087600_115087700
m54284U_201001_173734/31001029/ccs	chr2	-	172	1	Intergenic	novelGene_689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATACTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	30859032	30858860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_30858900_30859000
m54284U_201001_173734/31196757/ccs	chr1	-	247	1	Intergenic	novelGene_518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACTCAGGATTCACATG	NA	False	NA	NA	False	NA	NA	NA	180753318	180753071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_180753100_180753300
m54284U_201001_173734/31458941/ccs	chr18	-	157	1	Intergenic	novelGene_8835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	21054494	21054337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_21054300_21054500
m54284U_201001_173734/31590353/ccs	chr18	+	199	1	Antisense	novelGene_ENSMUSG00000003778.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACACATCTCAAACACA	NA	False	NA	NA	False	NA	NA	NA	34732637	34732836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_+_34732600_34732800
m54284U_201001_173734/31654181/ccs	chr3	+	190	1	Intergenic	novelGene_1347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGAGTGTTGACTCTTA	NA	False	NA	NA	False	NA	NA	NA	10285389	10285579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_10285400_10285600
m54284U_201001_173734/31917293/ccs	chr15	+	2708	1	Intergenic	novelGene_7782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACCGGAATAGAAGCA	145	False	NA	NA	False	NA	NA	NA	76690742	76693450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76690700_76693400
m54284U_201001_173734/31918264/ccs	chr11	+	196	1	Intergenic	novelGene_5840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAACCTGGGTTACATGA	NA	False	NA	NA	False	NA	NA	NA	53657173	53657369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53657200_53657400
m54284U_201001_173734/32047205/ccs	chr5	+	3220	1	Genic_Genomic	ENSMUSG00000029004.16	novel	NA	NA	NA	NA	-960	-48751	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACTTGAATCTGTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	23638478	23641698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_+_23638500_23641700
m54284U_201001_173734/32310646/ccs	chr18	+	191	1	Intergenic	novelGene_8897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACAGTCCATCAAACTC	NA	False	NA	NA	False	NA	NA	NA	35827497	35827688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35827500_35827700
m54284U_201001_173734/32508650/ccs	chrX	+	248	1	Intergenic	novelGene_9607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTAGTTGTGTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	105648203	105648451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_105648200_105648500
m54284U_201001_173734/329601/ccs	chr11	-	172	1	Intergenic	novelGene_6290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAGA	NA	False	NA	NA	False	NA	NA	NA	97836738	97836566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97836600_97836700
m54284U_201001_173734/32967004/ccs	chr10	+	2600	1	FSM	ENSMUSG00000087993.3	ENSMUST00000157368.3	74	1	-2111	-415	-2111	415	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTGTGTCTTGTGTCCT	NA	False	NA	14	True	AATAAA	-14	NA	80662519	80665119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_80662500_80665100
m54284U_201001_173734/33030571/ccschrUn	chrUn_JH584304v1	-	2553	8	Intergenic	novelGene_9761	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_7	289.381536158387	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	61455	52189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591_59774_61381
m54284U_201001_173734/33229275/ccs	chr4	+	5057	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_1	27.2514219812471	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126450727	126487696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486832
m54284U_201001_173734/33293226/ccs	chr1	+	183	1	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36580191	36580374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36580200_36580400
m54284U_201001_173734/33358866/ccs	chr2	+	4167	5	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078864.11	novel	1074	3	NA	NA	0	2935	multi-exon	FALSE	canonical	3	35	junction_2	90.385286413221	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACATTCCTTCCAAATT	NA	False	NA	NA	False	AATAAA	-38	NA	177190007	177415200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177190111_177193535_177193591_177409836_177409964_177410168_177410230_177411379
m54284U_201001_173734/3342922/ccs	chr1	-	170	1	Intergenic	novelGene_421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATATCTTTTTGTT	504	False	NA	NA	False	NA	NA	NA	157331893	157331723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_157331700_157331900
m54284U_201001_173734/3343407/ccs	chr18	-	176	1	Intergenic	novelGene_8827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATATTTTTTATTA	NA	False	NA	-1	True	NA	NA	NA	19051307	19051131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_19051100_19051300
m54284U_201001_173734/33621491/ccs	chr18	+	186	1	Intergenic	novelGene_8980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGCACTTTCACATGTA	NA	False	NA	NA	False	NA	NA	NA	63902828	63903014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_63902800_63903000
m54284U_201001_173734/33751651/ccs	chr2	-	191	1	Intergenic	novelGene_985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAACAGATGCTTAA	NA	False	NA	NA	False	NA	NA	NA	112228541	112228350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_112228400_112228500
m54284U_201001_173734/33751719/ccs	chr8	-	342	1	Intergenic	novelGene_4483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTTGGTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	110316750	110316408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_110316400_110316800
m54284U_201001_173734/33751786/ccs	chr2	+	192	1	Intergenic	novelGene_1214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAGAATTGAACCTAG	NA	False	NA	NA	False	NA	NA	NA	164639279	164639471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_164639300_164639500
m54284U_201001_173734/33818693/ccs	chr11	-	177	1	Intergenic	novelGene_6249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	95983451	95983274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95983300_95983500
m54284U_201001_173734/33883763/ccs	chr7	+	204	1	Intergenic	novelGene_4031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAGGCAGGGAGCATG	NA	False	NA	NA	False	NA	NA	NA	112442139	112442343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_112442100_112442300
m54284U_201001_173734/33948540/ccs	chr11	+	203	1	Intergenic	novelGene_5701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGCCTCATTGTTAATT	309	False	NA	NA	False	NA	NA	NA	11744437	11744640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_11744400_11744600
m54284U_201001_173734/34080511/ccs	chr4	-	309	1	Intergenic	novelGene_2367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGTTAAAATCAGAAAT	NA	False	NA	NA	False	AATAAA	-30	NA	148200943	148200634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_148200600_148200900
m54284U_201001_173734/34211803/ccs	chr16	+	178	1	Intergenic	novelGene_8277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATGATCAAAGGA	NA	False	NA	NA	False	NA	NA	NA	54415717	54415895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_54415700_54415900
m54284U_201001_173734/34668720/ccs	chr1	+	151	1	Intergenic	novelGene_371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAATAAATGTCACT	2240	False	NA	NA	False	NA	NA	NA	151365302	151365453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_151365300_151365500
m54284U_201001_173734/34736504/ccs	chr11	+	196	1	Intergenic	novelGene_5947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCGTGGTGGCGCACA	NA	False	NA	NA	False	NA	NA	NA	69486925	69487121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69486900_69487100
m54284U_201001_173734/35260782/ccs	chr3	-	194	1	Intergenic	novelGene_1611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGATGAGTTTCACTCAG	NA	False	NA	NA	False	NA	NA	NA	103723265	103723071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_103723100_103723300
m54284U_201001_173734/3541082/ccs	chr14	+	2228	1	FSM	ENSMUSG00000076062.3	ENSMUST00000102108.3	80	1	73	-2221	73	2221	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTGTATCTTGTTTTT	NA	False	NA	7	True	AATAAA	-19	NA	115281931	115284159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_115281900_115284200
m54284U_201001_173734/35522924/ccs	chr7	-	1089	6	NIC	ENSMUSG00000001827.13	novel	1286	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	123.544971569061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTGTGAATGAGAATG	3225	False	NA	0	True	AATAAA	-31	NA	101518225	101507537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_101507952_101508303_101508440_101508572_101508762_101513131_101513302_101517604_101517759_101518199
m54284U_201001_173734/36111767/ccs	chr15	-	188	1	Intergenic	novelGene_7880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATAGTACTCATATAT	9267	False	NA	NA	False	NA	NA	NA	84173799	84173611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_84173600_84173800
m54284U_201001_173734/36178626/ccs	chrX	+	181	1	Intergenic	novelGene_9569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	101083253	101083434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_101083300_101083400
m54284U_201001_173734/36243046/ccs	chr2	+	196	1	Intergenic	novelGene_735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCTTCAGTGCTG	NA	False	NA	NA	False	NA	NA	NA	33369857	33370053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33369900_33370100
m54284U_201001_173734/36372981/ccs	chr6	+	176	1	Intergenic	novelGene_3115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAGTTAATGTATAG	NA	False	NA	NA	False	NA	NA	NA	22356974	22357150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_22357000_22357200
m54284U_201001_173734/36440524/ccs	chr6	-	4490	1	Intergenic	novelGene_3541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	133990777	133986287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_133986300_133990800
m54284U_201001_173734/36506229/ccs	chr6	+	187	1	Intergenic	novelGene_3262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGTATGAAGACTTTCT	NA	False	NA	NA	False	NA	NA	NA	49212702	49212889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_49212700_49212900
m54284U_201001_173734/36570134/ccs	chr8	-	189	1	Intergenic	novelGene_4320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAGGGAAAAAAA	381	False	NA	NA	False	NA	NA	NA	70488135	70487946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_70487900_70488100
m54284U_201001_173734/3670706/ccs	chr15	-	223	1	Intergenic	novelGene_7902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCCCATGGCTGATCCA	8898	False	NA	NA	False	NA	NA	NA	88679089	88678866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_88678900_88679100
m54284U_201001_173734/3671060/ccs	chr3	-	165	1	Intergenic	novelGene_1504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTTTTTTTTTAA	NA	False	NA	-2	True	NA	NA	NA	88812303	88812138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88812100_88812300
m54284U_201001_173734/3671129/ccs	chrX	+	242	1	Intergenic	novelGene_9419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAAACACACTTTTTGT	NA	False	NA	NA	False	TTTAAA	-4	NA	35983861	35984103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_35983900_35984100
m54284U_201001_173734/36833488/ccs	chr13	+	185	1	Intergenic	novelGene_7040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTAGTCATGAAATTTT	NA	False	NA	NA	False	NA	NA	NA	43636075	43636260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_43636100_43636300
m54284U_201001_173734/37094305/ccs	chr11	-	2239	11	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_10	98.3301072917141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8372	False	NA	-10	True	AATAAA	-18	NA	82799168	82791597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799158
m54284U_201001_173734/37226209/ccs	chr8	-	191	1	Antisense	novelGene_ENSMUSG00000031902.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAACATTGGTAATAATT	NA	False	NA	NA	False	NA	NA	NA	106825577	106825386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_106825400_106825600
m54284U_201001_173734/37292641/ccs	chr17	-	165	1	Intergenic	novelGene_8757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACACCACCACCA	NA	False	NA	NA	False	NA	NA	NA	83992804	83992639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_83992600_83992800
m54284U_201001_173734/37422774/ccs	chr2	-	4867	11	NIC	ENSMUSG00000026918.17	novel	5272	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	82.3592739161778	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGTGTGGTGCTCT	NA	False	NA	-6	True	AATAAA	-14	NA	27365665	27335590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
m54284U_201001_173734/37423803/ccs	chr9	+	187	1	Intergenic	novelGene_4700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTTTCATTATCCTAC	NA	False	NA	NA	False	NA	NA	NA	32106343	32106530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_32106300_32106500
m54284U_201001_173734/37554883/ccs	chr6	+	187	1	Intergenic	novelGene_3574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATTTTCAACCTCAT	NA	False	NA	NA	False	NA	NA	NA	146197768	146197955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_146197800_146198000
m54284U_201001_173734/37619767/ccs	chr6	+	177	1	Intergenic	novelGene_3568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACTATCTCTGGG	NA	False	NA	NA	False	NA	NA	NA	141908578	141908755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_141908600_141908800
m54284U_201001_173734/37620422/ccs	chr8	+	199	1	Intergenic	novelGene_4510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGATACAAGATGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	112203285	112203484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112203300_112203500
m54284U_201001_173734/37816089/ccs	chr17	+	266	1	Intergenic	novelGene_8611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	46421360	46421626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_46421400_46421600
m54284U_201001_173734/37880436/ccs	chr1	+	195	1	Intergenic	novelGene_123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAGAACAAGAAGAACA	NA	False	NA	NA	False	NA	NA	NA	53206451	53206646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_53206500_53206600
m54284U_201001_173734/37945884/ccs	chr5	+	208	1	Genic_Genomic	ENSMUSG00000029447.14	novel	NA	NA	NA	NA	983	5	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTAGTTTGAATACTTT	NA	False	NA	NA	False	NA	NA	NA	129867924	129868132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_+_129867900_129868100
m54284U_201001_173734/38012687/ccs	chr9	-	180	1	Intergenic	novelGene_4738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAAAGAGAGAGAGA	2762	False	NA	NA	False	NA	NA	NA	44507423	44507243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_44507200_44507400
m54284U_201001_173734/38798057/ccs	chr17	-	151	1	Intergenic	novelGene_8576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAACCCACTAAGAAT	NA	False	NA	NA	False	NA	NA	NA	36195308	36195157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_36195200_36195300
m54284U_201001_173734/39127267/ccs	chr9	+	152	1	Intergenic	novelGene_4862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAATTATTTGTAA	4396	False	NA	NA	False	NA	NA	NA	64183715	64183867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64183700_64183900
m54284U_201001_173734/3934701/ccs	chr1	+	187	1	Intergenic	novelGene_240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATTTAATGTATGAGGA	NA	False	NA	NA	False	NA	NA	NA	88524338	88524525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_88524300_88524500
m54284U_201001_173734/39389201/ccs	chr12	-	188	1	Intergenic	novelGene_6900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGACAACATGTTTACT	NA	False	NA	NA	False	NA	NA	NA	110716626	110716438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_110716400_110716600
m54284U_201001_173734/39453395/ccs	chr5	+	189	1	Intergenic	novelGene_2970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGAGCCACATTCCCA	NA	False	NA	NA	False	NA	NA	NA	134767286	134767475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_134767300_134767500
m54284U_201001_173734/39583748/ccs	chr2	+	8606	30	NNC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	98.226509083859	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6650	False	NA	24	True	AATAAA	-40	NA	32041093	32124549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098654_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
m54284U_201001_173734/39846190/ccs	chr10	+	213	1	Intergenic	novelGene_5446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGAGAGTATACTGG	79	False	NA	NA	False	NA	NA	NA	80047334	80047547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80047300_80047500
m54284U_201001_173734/40042817/ccs	chr3	-	189	1	Intergenic	novelGene_1403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTTTGAGGTAGAGAGC	NA	False	NA	NA	False	NA	NA	NA	51481104	51480915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_51480900_51481100
m54284U_201001_173734/40043214/ccs	chr11	-	2798	3	NIC	ENSMUSG00000020152.8	novel	3631	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	359.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTTTGTCTTTTTCT	1336	False	NA	-4	True	AATAAA	-19	NA	20062913	20012303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_20014860_20022455_20022589_20062804
m54284U_201001_173734/40045010/ccs	chr8	+	177	1	Intergenic	novelGene_4533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACACCACC	NA	False	NA	NA	False	NA	NA	NA	118191602	118191779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_118191600_118191800
m54284U_201001_173734/40241454/ccs	chrX	-	189	1	Intergenic	novelGene_9486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCATTAGGGACTTAA	NA	False	NA	NA	False	NA	NA	NA	62977544	62977355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_62977400_62977500
m54284U_201001_173734/40241902/ccs	chr19	-	176	1	Intergenic	novelGene_9131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTGAGCACGAGTG	-46	True	NA	NA	False	NA	NA	NA	6987738	6987562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_6987600_6987700
m54284U_201001_173734/40831568/ccs	chr4	+	156	1	Intergenic	novelGene_2225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTTTTTTTTTT	3477	False	NA	2	True	NA	NA	NA	133629475	133629631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133629500_133629600
m54284U_201001_173734/40895186/ccs	chr11	-	4305	6	NIC	ENSMUSG00000051790.16	novel	5003	7	NA	NA	57	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	5.6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTCTCCTGTCGT	9992	False	NA	-2	True	TATAAA	-14	NA	69725028	69713947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69724807
m54284U_201001_173734/41224025/ccs	chr16	-	176	1	Intergenic	novelGene_8334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGACTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	95918739	95918563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_95918600_95918700
m54284U_201001_173734/4129172/ccs	chr17	+	178	1	Intergenic	novelGene_8791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGCACTGGAAATCT	NA	False	NA	NA	False	NA	NA	NA	94941372	94941550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_94941400_94941600
m54284U_201001_173734/4131533/ccs	chr14	-	216	1	Intergenic	novelGene_7403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGTGGCTGCTCTTCCA	NA	False	NA	NA	False	TTTAAA	-5	NA	40851604	40851388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_40851400_40851600
m54284U_201001_173734/4194597/ccs	chr4	-	196	1	Intergenic	novelGene_2330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGACTCAAAAGAAATAG	NA	False	NA	NA	False	NA	NA	NA	145323072	145322876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_145322900_145323100
m54284U_201001_173734/42010566/ccs	chr11	+	171	1	Intergenic	novelGene_5997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAAAAAATCATACTT	NA	False	NA	NA	False	NA	NA	NA	74977546	74977717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74977500_74977700
m54284U_201001_173734/42336466/ccs	chr16	+	2457	1	NIC	ENSMUSG00000022528.9	novel	1468	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAGAACTGATTATTT	NA	False	NA	16	True	AATAAA	-17	NA	29884157	29886614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_29884200_29886600
m54284U_201001_173734/42796778/ccs	chr11	-	180	1	Intergenic	novelGene_5656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAACAATTGGATAT	NA	False	NA	NA	False	NA	NA	NA	3987304	3987124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_3987100_3987300
m54284U_201001_173734/42991844/ccs	chr9	-	235	1	Intergenic	novelGene_4707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTGAGATCTGATGTC	6724	False	NA	NA	False	NA	NA	NA	36724338	36724103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_36724100_36724300
m54284U_201001_173734/43058605/ccs	chr19	+	189	1	Intergenic	novelGene_9148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTTTGTTTGTTTTTGA	NA	False	NA	31	True	NA	NA	NA	8696533	8696722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_8696500_8696700
m54284U_201001_173734/43253965/ccs	chr2	-	181	1	Intergenic	novelGene_1306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCACATAATTATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	177467340	177467159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_177467200_177467300
m54284U_201001_173734/43255904/ccs	chr15	-	5268	1	Intergenic	novelGene_7654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAGACCGTTTTCTCG	9797	False	NA	NA	False	NA	NA	NA	22705093	22699825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_22699800_22705100
m54284U_201001_173734/43910216/ccs	chr11	+	178	1	Intergenic	novelGene_6066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGAAGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78218689	78218867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_78218700_78218900
m54284U_201001_173734/43910745/ccs	chr10	+	412	1	Intergenic	novelGene_5505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGACACATACCG	NA	False	NA	NA	False	NA	NA	NA	93637878	93638290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_93637900_93638300
m54284U_201001_173734/4393244/ccs	chr9	+	188	1	Intergenic	novelGene_5154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACATGGGTAGGTAGCA	NA	False	NA	NA	False	NA	NA	NA	121041125	121041313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_121041100_121041300
m54284U_201001_173734/44302649/ccs	chr8	+	158	1	Intergenic	novelGene_4303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAATAAATTAAT	NA	False	NA	NA	False	NA	NA	NA	61879992	61880150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_61880000_61880200
m54284U_201001_173734/4456514/ccs	chr9	+	181	1	Intergenic	novelGene_5094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAATTAAGGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	109681517	109681698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_109681500_109681700
m54284U_201001_173734/44695578/ccs	chr4	-	4395	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	325.951499713208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126095314_126095422_126096362
m54284U_201001_173734/44761324/ccs	chr4	+	194	1	Intergenic	novelGene_2063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAATGTGCGAGAGGTGG	NA	False	NA	-34	True	NA	NA	NA	119227055	119227249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_119227100_119227200
m54284U_201001_173734/44761502/ccs	chr11	+	4041	1	NIC	ENSMUSG00000020708.13	novel	1316	11	NA	NA	0	-2926	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGCCAAGTGCTCGCT	4536	False	NA	NA	False	NA	NA	NA	106146979	106151020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_106147000_106151000
m54284U_201001_173734/44829355/ccs	chr9	+	179	1	Intergenic	novelGene_4652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTTTGGATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	20934744	20934923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_20934700_20934900
m54284U_201001_173734/45023937/ccs	chr2	+	211	1	Intergenic	novelGene_1122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTATTTGATTGACTT	NA	False	NA	NA	False	NA	NA	NA	152196675	152196886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_152196700_152196900
m54284U_201001_173734/45483665/ccs	chr18	-	2771	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	0	-219	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	1604.51009345532	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	199	False	NA	-11	True	AATAAA	-19	NA	35087410	35070685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35087222
m54284U_201001_173734/45484890/ccs	chr4	+	180	1	Intergenic	novelGene_2249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAACAACCC	NA	False	NA	NA	False	NA	NA	NA	135720234	135720414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_135720200_135720400
m54284U_201001_173734/45744173/ccs	chr10	+	330	1	Intergenic	novelGene_5306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGACGAAATCTTTT	31	False	NA	NA	False	NA	NA	NA	58394419	58394749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_58394400_58394700
m54284U_201001_173734/45810363/ccs	chr2	+	178	1	Intergenic	novelGene_1067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGCTATTTATTCT	NA	False	NA	NA	False	NA	NA	NA	130255869	130256047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_130255900_130256000
m54284U_201001_173734/4590172/ccs	chr10	+	185	1	Intergenic	novelGene_5529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCAGACATTTG	NA	False	NA	NA	False	NA	NA	NA	108031071	108031256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_108031100_108031300
m54284U_201001_173734/46137968/ccs	chr17	-	3039	14	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	519.991499702941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5740	False	NA	-8	True	AATAAA	-13	NA	33904393	33865212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33896247_33896415_33904240
m54284U_201001_173734/46531248/ccs	chr4	+	143	1	Intergenic	novelGene_1781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATATAAATCAAAAAT	NA	False	NA	NA	False	NA	NA	NA	32778774	32778917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_32778800_32778900
m54284U_201001_173734/46793840/ccs	chr2	+	160	1	Intergenic	novelGene_586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAATAATCCAAGAGATT	NA	False	NA	NA	False	NA	NA	NA	6756887	6757047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_6756900_6757000
m54284U_201001_173734/46860240/ccs	chr6	+	189	1	Intergenic	novelGene_3105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGGCTAATGGGTGAC	NA	False	NA	NA	False	NA	NA	NA	6537873	6538062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_6537900_6538100
m54284U_201001_173734/46860454/ccs	chrX	+	173	1	Intergenic	novelGene_9506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	73319244	73319417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_73319200_73319400
m54284U_201001_173734/46924318/ccs	chr1	-	175	1	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAGAGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	37250737	37250562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_37250600_37250700
m54284U_201001_173734/46925972/ccs	chr11	+	135	1	Intergenic	novelGene_5970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	71872231	71872366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_71872200_71872400
m54284U_201001_173734/47317966/ccs	chr11	+	191	1	Intergenic	novelGene_5757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAACAAATAG	NA	False	NA	NA	False	NA	NA	NA	29583538	29583729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_29583500_29583700
m54284U_201001_173734/47448781/ccs	chr5	+	177	1	Intergenic	novelGene_2518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATTTAATTAAATAAATAA	6175	False	NA	NA	False	NA	NA	NA	31258091	31258268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_31258100_31258300
m54284U_201001_173734/47450459/ccs	chr8	+	1501	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	594.626119693898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGAGTTGTGATTGAC	NA	False	NA	24	True	ACTAAA	-17	NA	23901517	23939648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_23902345_23907345_23907424_23936181_23936382_23939252
m54284U_201001_173734/47712174/ccs	chr11	+	403	1	Genic_Genomic	ENSMUSG00000038534.20	novel	NA	NA	NA	NA	-262	589	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAATCGTCTAGAAATG	NA	False	NA	NA	False	NA	NA	NA	96943987	96944390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_96944000_96944400
m54284U_201001_173734/47778273/ccs	chr7	-	180	1	Intergenic	novelGene_3674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTGAGCTGGTAAT	NA	False	NA	NA	False	NA	NA	NA	16594006	16593826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_16593800_16594000
m54284U_201001_173734/47842322/ccs	chr1	-	2010	1	ISM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	73639	0	73639	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGAGACTCAACCTGA	305	False	NA	32	True	NA	NA	NA	71068666	71066656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_71066700_71068700
m54284U_201001_173734/47907901/ccs	chr6	-	3590	19	NNC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	27.6195493477508	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATTAAAAGAGAAGAAGAA	NA	False	NA	-23	True	TTTAAA	-7	NA	39534801	39440186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474106_39483634_39483757_39485175_39485304_39499589_39500694_39534508
m54284U_201001_173734/48105831/ccs	chr15	-	177	1	Intergenic	novelGene_7908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGCTGAGCGTGGT	4166	False	NA	NA	False	NA	NA	NA	89425727	89425550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_89425600_89425700
m54284U_201001_173734/48236494/ccs	chr2	+	1845	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	47058	0	8910	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGCGTGTTTTTTGAT	181	False	NA	NA	False	AATAAA	-17	NA	132152125	132153970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_132152100_132154000
m54284U_201001_173734/48432315/ccs	chr8	+	179	1	Intergenic	novelGene_4202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGAATACAC	NA	False	NA	NA	False	NA	NA	NA	12565698	12565877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_12565700_12565900
m54284U_201001_173734/4849782/ccs	chr14	+	189	1	Intergenic	novelGene_7573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATCTACTTTTAATAGA	NA	False	NA	NA	False	NA	NA	NA	99186988	99187177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_99187000_99187200
m54284U_201001_173734/49088160/ccs	chr5	-	191	1	Intergenic	novelGene_3062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACACACACACAAAT	NA	False	NA	NA	False	NA	NA	NA	144931621	144931430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_144931400_144931600
m54284U_201001_173734/49218318/ccs	chr5	-	4326	3	ISM	ENSMUSG00000049606.17	ENSMUST00000127434.8	2559	6	-4	50101	0	1860	5prime_fragment	FALSE	canonical	2	6	junction_1	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGCTCTTGAGAATTT	NA	False	NA	NA	False	AATAAA	-13	NA	106844696	106834773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_106838744_106843508_106843566_106844397
m54284U_201001_173734/49283673/ccs	chr19	-	186	1	Intergenic	novelGene_9251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	40624594	40624408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_40624400_40624600
m54284U_201001_173734/49808627/ccs	chr19	-	197	1	Intergenic	novelGene_9332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTATGGTGGTAAAAA	2355	False	NA	NA	False	NA	NA	NA	53036886	53036689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_53036700_53036900
m54284U_201001_173734/49873295/ccs	chrX	+	183	1	Intergenic	novelGene_9664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCGGTTTTGCTGAGA	NA	False	NA	NA	False	NA	NA	NA	149885900	149886083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_149885900_149886100
m54284U_201001_173734/50004371/ccs	chr15	+	207	1	Intergenic	novelGene_7713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACGGCATTTGTGCATCC	NA	False	NA	NA	False	NA	NA	NA	52985800	52986007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_52985800_52986000
m54284U_201001_173734/50072318/ccs	chr11	-	171	1	Intergenic	novelGene_5686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGGTGCAGTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	6254813	6254642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_6254600_6254800
m54284U_201001_173734/50135226/ccs	chr19	+	173	1	Intergenic	novelGene_9082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATGAAAC	NA	False	NA	NA	False	NA	NA	NA	4386221	4386394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4386200_4386400
m54284U_201001_173734/50399350/ccs	chr4	+	266	1	Intergenic	novelGene_2206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCATTAAATTTTGGG	1631	False	NA	NA	False	NA	NA	NA	132625957	132626223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132626000_132626200
m54284U_201001_173734/50399737/ccs	chr9	+	191	1	Intergenic	novelGene_4630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCGGGAGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	12550496	12550687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_12550500_12550700
m54284U_201001_173734/50529373/ccs	chr13	-	4032	1	Genic_Genomic	ENSMUSG00000112964.2	novel	NA	NA	NA	NA	-1919	5390	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGTGCACGTGCCATTGT	NA	False	NA	NA	False	NA	NA	NA	74594032	74590000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_-_74590000_74594000
m54284U_201001_173734/50725337/ccs	chr9	-	206	1	Intergenic	novelGene_5115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGTGGTGGTTGCACAT	NA	False	NA	NA	False	NA	NA	NA	110625782	110625576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_110625600_110625800
m54284U_201001_173734/50924327/ccs	chr6	-	197	1	Intergenic	novelGene_3346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATTATATATAAAACAA	9832	False	NA	NA	False	AATAAA	-16	NA	83835290	83835093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_83835100_83835300
m54284U_201001_173734/51053700/ccs	chr15	-	224	1	Intergenic	novelGene_7710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTAGTGATTGCCTG	NA	False	NA	NA	False	NA	NA	NA	51736585	51736361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_51736400_51736600
m54284U_201001_173734/5111898/ccs	chr19	-	204	1	Genic_Genomic	ENSMUSG00000024970.6	novel	NA	NA	NA	NA	20096	40	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGAGAGCCTGGAATTTA	10003	False	NA	NA	False	NA	NA	NA	7331606	7331402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_7331400_7331600
m54284U_201001_173734/5112443/ccs	chr2	+	3193	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_16	204.564318867278	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	493	False	NA	36	True	AATAAA	-37	NA	31462662	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31462966_31473166_31473273_31482477_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505638_31506190
m54284U_201001_173734/51184659/ccs	chr8	-	184	1	Intergenic	novelGene_4517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGTACAAATGCACAAACA	NA	False	NA	NA	False	NA	NA	NA	112519065	112518881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_112518900_112519100
m54284U_201001_173734/51186020/ccs	chrX	+	184	1	Intergenic	novelGene_9657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGATGCCTATTCTGTT	8619	False	NA	NA	False	NA	NA	NA	144162359	144162543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_144162400_144162500
m54284U_201001_173734/51380794/ccs	chr11	+	198	1	Intergenic	novelGene_5921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTGAAAATAATTAACAC	NA	False	NA	NA	False	NA	NA	NA	68042537	68042735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68042500_68042700
m54284U_201001_173734/51512834/ccs	chr4	+	169	1	Intergenic	novelGene_1949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAGTTGGAAGGAC	NA	False	NA	NA	False	NA	NA	NA	99552343	99552512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_99552300_99552500
m54284U_201001_173734/5178116/ccs	chr11	+	183	1	Intergenic	novelGene_6084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGTTCCAGGTAAAGAA	1983	False	NA	NA	False	NA	NA	NA	79530192	79530375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79530200_79530400
m54284U_201001_173734/51841401/ccs	chr4	-	178	1	Intergenic	novelGene_2146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	129277899	129277721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129277700_129277900
m54284U_201001_173734/52037423/ccs	chr9	+	190	1	Intergenic	novelGene_4971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTTACAGCAGTGACGT	NA	False	NA	NA	False	NA	NA	NA	78424740	78424930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_78424700_78424900
m54284U_201001_173734/52038466/ccs	chr6	+	1141	1	NIC	ENSMUSG00000012396.13	novel	1995	5	NA	NA	0	-5925	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGATTTTTCTGATTTA	NA	False	NA	NA	False	NA	NA	NA	122684526	122685667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_122684500_122685700
m54284U_201001_173734/52300464/ccs	chr13	+	192	1	Intergenic	novelGene_7185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCCCACTGCCTCAGGA	9273	False	NA	NA	False	NA	NA	NA	67137508	67137700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_67137500_67137700
m54284U_201001_173734/52365389/ccs	chr14	+	182	1	Intergenic	novelGene_7544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAAATGTGTT	NA	False	NA	NA	False	NA	NA	NA	76097989	76098171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_76098000_76098200
m54284U_201001_173734/52561785/ccs	chr10	+	202	1	Intergenic	novelGene_5185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTTAACAAGCTGCATC	NA	False	NA	NA	False	AATAAA	-11	NA	7501469	7501671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_7501500_7501700
m54284U_201001_173734/52562480/ccs	chr10	-	178	1	Intergenic	novelGene_5262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTTACATAGCAA	NA	False	NA	NA	False	NA	NA	NA	39642413	39642235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_39642200_39642400
m54284U_201001_173734/52626017/ccs	chr17	-	158	1	Intergenic	novelGene_8607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGCCTGAGTGAGCG	8268	False	NA	NA	False	NA	NA	NA	46024106	46023948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_46023900_46024100
m54284U_201001_173734/5310808/ccs	chr11	+	204	1	Intergenic	novelGene_6027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	76036610	76036814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76036600_76036800
m54284U_201001_173734/5310848/ccs	chr17	+	159	1	Intergenic	novelGene_8457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	28438372	28438531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_28438400_28438500
m54284U_201001_173734/53150793/ccs	chr13	+	176	1	Intergenic	novelGene_7089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATTAAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	55241996	55242172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55242000_55242200
m54284U_201001_173734/53283568/ccs	chr14	+	3631	1	Intergenic	novelGene_7367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAGGAAGGAAGGAA	1120	False	NA	NA	False	NA	NA	NA	26657613	26661244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_26657600_26661200
m54284U_201001_173734/53412613/ccs	chr1	+	188	1	Intergenic	novelGene_169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCAAAAGAAAACTACTTT	NA	False	NA	NA	False	NA	NA	NA	70500456	70500644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_70500500_70500600
m54284U_201001_173734/53413463/ccs	chr11	-	169	1	Intergenic	novelGene_5873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	59277338	59277169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_59277200_59277300
m54284U_201001_173734/53674474/ccs	chr1	+	174	1	Intergenic	novelGene_175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATAAATTCTTTT	NA	False	NA	NA	False	NA	NA	NA	72278486	72278660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_72278500_72278700
m54284U_201001_173734/53739838/ccs	chr18	+	187	1	Intergenic	novelGene_8848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTAAAACAAGAACATCC	NA	False	NA	NA	False	NA	NA	NA	30169805	30169992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_30169800_30170000
m54284U_201001_173734/53805632/ccs	chr9	+	187	1	Intergenic	novelGene_5108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACATCTTTTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	110160217	110160404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_110160200_110160400
m54284U_201001_173734/54068133/ccs	chr14	+	178	1	Intergenic	novelGene_7462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTGTTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	54846173	54846351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54846200_54846400
m54284U_201001_173734/54132775/ccs	chr16	+	1703	1	NIC	ENSMUSG00000097537.3	novel	2942	2	NA	NA	0	-18547	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGCTACAGAACAATAC	9699	False	NA	NA	False	TTTAAA	-38	NA	11021229	11022932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_11021200_11022900
m54284U_201001_173734/54135091/ccs	chr3	+	176	1	Intergenic	novelGene_1571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95730869	95731045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95730900_95731000
m54284U_201001_173734/54198484/ccs	chr9	-	214	1	Intergenic	novelGene_4722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAATTCAGCCAGGGTG	NA	False	NA	NA	False	TTTAAA	-7	NA	43033409	43033195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_43033200_43033400
m54284U_201001_173734/54395055/ccs	chr12	+	172	1	Intergenic	novelGene_6732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAAGAAGAAGGAG	4835	False	NA	NA	False	NA	NA	NA	76551917	76552089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_76551900_76552100
m54284U_201001_173734/54461872/ccs	chr9	+	182	1	Intergenic	novelGene_4997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAGATTTCATTATG	NA	False	NA	NA	False	NA	NA	NA	89998895	89999077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_89998900_89999100
m54284U_201001_173734/54526981/ccs	chr10	+	179	1	Intergenic	novelGene_5631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAGATGCCTGCTTATA	147	False	NA	NA	False	NA	NA	NA	128376637	128376816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128376600_128376800
m54284U_201001_173734/54658001/ccs	chr4	-	186	1	Intergenic	novelGene_2006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGCCCTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	114365676	114365490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_114365500_114365700
m54284U_201001_173734/54659400/ccs	chr19	+	176	1	Intergenic	novelGene_9290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATGAAAAT	NA	False	NA	NA	False	NA	NA	NA	45248411	45248587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45248400_45248600
m54284U_201001_173734/54722816/ccs	chr6	-	179	1	Intergenic	novelGene_3165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGTACAAATGGCATTG	NA	False	NA	NA	False	NA	NA	NA	34917077	34916898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_34916900_34917100
m54284U_201001_173734/55181675/ccs	chr4	+	187	1	Intergenic	novelGene_1868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	503	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTTTGTGGCTGAATC	NA	False	NA	NA	False	NA	NA	NA	52517962	52518149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_52518000_52518100
m54284U_201001_173734/55181819/ccs	chr11	+	170	1	Intergenic	novelGene_5917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAAGTACTCGT	NA	False	NA	NA	False	NA	NA	NA	66782785	66782955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_66782800_66783000
m54284U_201001_173734/55576106/ccs	chrX	+	190	1	Intergenic	novelGene_9605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTCATGCCGGTCGGCC	NA	False	NA	NA	False	NA	NA	NA	105219678	105219868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_105219700_105219900
m54284U_201001_173734/55706452/ccs	chr17	+	220	1	Intergenic	novelGene_8390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTTGAT	NA	False	NA	NA	False	AAAAAG	-13	NA	20319928	20320148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_20319900_20320100
m54284U_201001_173734/5571471/ccs	chr2	+	3145	1	Genic_Genomic	ENSMUSG00000068264.12	novel	NA	NA	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTCTTTTTGTGCG	NA	False	NA	11	True	ATTAAA	-17	NA	131052289	131055434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_131052300_131055400
m54284U_201001_173734/5572652/ccs	chr8	+	177	1	Intergenic	novelGene_4349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGCCGGGCGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	75800091	75800268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_75800100_75800300
m54284U_201001_173734/55902377/ccs	chr18	+	3488	1	Antisense	novelGene_ENSMUSG00000056124.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATATATAGTATTTATGAAA	NA	False	NA	NA	False	ATTAAA	-17	NA	20878429	20881917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_+_20878400_20881900
m54284U_201001_173734/55903568/ccs	chr16	-	177	1	Intergenic	novelGene_8232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATTAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	33745724	33745547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_33745500_33745700
m54284U_201001_173734/55905091/ccs	chr2	+	198	1	Intergenic	novelGene_1078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGCAAAAAATGAAAAG	NA	False	NA	NA	False	NA	NA	NA	132044174	132044372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_132044200_132044400
m54284U_201001_173734/56101382/ccs	chr18	-	3508	12	ISM	ENSMUSG00000024456.17	ENSMUST00000115629.9	5416	26	15633	-4	7159	0	3prime_fragment	FALSE	non_canonical	0	0	junction_4	32.2981973756897	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTCTAGCCTCCTTTG	NA	False	NA	-20	True	AATAAA	-15	NA	38023836	37976653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986762_37987532_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993576_38022750_38022866_38023529
m54284U_201001_173734/56231341/ccs	chr13	-	3739	1	Intergenic	novelGene_7253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTCTACTTGTAGGGTC	NA	False	NA	NA	False	AATAAA	-11	NA	96830419	96826680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_96826700_96830400
m54284U_201001_173734/56296271/ccs	chr19	+	2117	1	Intergenic	novelGene_9258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTAAAGCTTGGTT	4181	False	NA	7	True	AATAAA	-15	NA	41553963	41556080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_41554000_41556100
m54284U_201001_173734/5636139/ccs	chr15	-	178	1	Intergenic	novelGene_7700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGTTTTTAAAAAATAAAG	NA	False	NA	NA	False	NA	NA	NA	41855341	41855163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_41855200_41855300
m54284U_201001_173734/56426914/ccs	chr1	+	3987	1	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_86454400_86458400
m54284U_201001_173734/56427311/ccs	chr4	-	6696	1	ISM	ENSMUSG00000055296.15	ENSMUST00000068792.13	15981	18	73715	104	49736	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCGTTTCTTAGCTTT	895	False	NA	NA	False	AATAAA	-16	NA	56873722	56867026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_-_56867000_56873700
m54284U_201001_173734/56558277/ccs	chr10	-	193	1	FSM	ENSMUSG00000040006.14	ENSMUST00000188270.2	1405	1	533	679	509	424	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTATACTCTTTTCTAATC	NA	False	NA	NA	False	NA	NA	NA	7668055	7667862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_7667900_7668100
m54284U_201001_173734/56559992/ccs	chr17	-	196	1	Intergenic	novelGene_8701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGCTCTTCCCTCCAAAG	NA	False	NA	NA	False	NA	NA	NA	71099475	71099279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71099300_71099500
m54284U_201001_173734/56689116/ccs	chr17	+	199	1	Intergenic	novelGene_8544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACAGAATGGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	35157915	35158114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35157900_35158100
m54284U_201001_173734/56820924/ccs	chr10	+	176	1	Intergenic	novelGene_5350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	5664	False	NA	NA	False	NA	NA	NA	62608044	62608220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62608000_62608200
m54284U_201001_173734/57148775/ccs	chr2	+	121	1	Intergenic	novelGene_926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAATAACAACAACAATAC	7752	False	NA	NA	False	NA	NA	NA	91127637	91127758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91127600_91127800
m54284U_201001_173734/57150014/ccs	chr11	+	177	1	Intergenic	novelGene_6478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACCAAAGC	NA	False	NA	NA	False	NA	NA	NA	116527592	116527769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_116527600_116527800
m54284U_201001_173734/57409579/ccs	chr11	-	175	1	Intergenic	novelGene_6442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGGGTGATGCCCACAC	NA	False	NA	NA	False	NA	NA	NA	114641982	114641807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_114641800_114642000
m54284U_201001_173734/57412351/ccs	chr15	+	177	1	Intergenic	novelGene_7967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	99566058	99566235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99566100_99566200
m54284U_201001_173734/57475546/ccs	chr8	-	190	1	Intergenic	novelGene_4449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTTGGCAGGGCA	NA	False	NA	NA	False	NA	NA	NA	106641041	106640851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106640900_106641000
m54284U_201001_173734/57607910/ccs	chr12	+	250	1	Intergenic	novelGene_6672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGGACCATAGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	65219977	65220227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_65220000_65220200
m54284U_201001_173734/57803985/ccs	chr13	+	169	1	Intergenic	novelGene_6966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATATCTAGCTTC	NA	False	NA	NA	False	NA	NA	NA	12250986	12251155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_12251000_12251200
m54284U_201001_173734/57868299/ccs	chr3	+	176	1	Intergenic	novelGene_1392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAAGTTCCTCTCTC	NA	False	NA	NA	False	NA	NA	NA	51262578	51262754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_51262600_51262800
m54284U_201001_173734/58002239/ccs	chr7	-	192	1	Intergenic	novelGene_3801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAATTCAATT	NA	False	NA	NA	False	NA	NA	NA	39196157	39195965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_39196000_39196200
m54284U_201001_173734/58133076/ccs	chr16	+	195	1	Antisense	novelGene_ENSMUSG00000022521.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTAAAACCAGCAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	3904800	3904995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_+_3904800_3905000
m54284U_201001_173734/58196906/ccs	chr6	+	185	1	Intergenic	novelGene_3273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATATGTTTTTCTGTTA	6995	False	NA	NA	False	NA	NA	NA	52125396	52125581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_52125400_52125600
m54284U_201001_173734/58262528/ccs	chr8	-	6466	1	NIC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	9723	-739	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGATCCTGCTGGAA	NA	False	NA	-8	True	AATAAA	-17	NA	89761067	89754601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_89754600_89761100
m54284U_201001_173734/58264110/ccs	chr6	+	2931	1	ISM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	115146	0	21260	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTTGCCAAAATTACTT	NA	False	NA	NA	False	AATAAA	-17	NA	31490815	31493746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_31490800_31493700
m54284U_201001_173734/58329737/ccs	chr9	+	172	1	Intergenic	novelGene_4795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAGCTGAATTTTTGTA	1924	False	NA	NA	False	NA	NA	NA	56939750	56939922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_56939800_56939900
m54284U_201001_173734/5835354/ccs	chr11	-	195	1	Intergenic	novelGene_6388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAGACTCCAGGAAGAT	6481	False	NA	NA	False	NA	NA	NA	106381630	106381435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106381400_106381600
m54284U_201001_173734/58458530/ccs	chr18	+	190	1	Intergenic	novelGene_9055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGATGGCGTCATGG	NA	False	NA	NA	False	NA	NA	NA	82954420	82954610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_82954400_82954600
m54284U_201001_173734/58655621/ccs	chrX	-	177	1	Intergenic	novelGene_9650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTCCCATCTTC	NA	False	NA	NA	False	NA	NA	NA	141577961	141577784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_141577800_141578000
m54284U_201001_173734/58787307/ccs	chr5	+	188	1	Intergenic	novelGene_3042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAATGTGGGTGTTGG	1806	False	NA	NA	False	NA	NA	NA	142965489	142965677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_142965500_142965700
m54284U_201001_173734/5900456/ccs	chr5	+	916	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	-162	700	-162	-700	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGCCTGTATAGCCTT	NA	False	NA	NA	False	TATAAA	-13	NA	25734848	25735764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_25734800_25735800
m54284U_201001_173734/59050754/ccs	chr9	+	3562	20	NNC	ENSMUSG00000032178.15	novel	3549	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_13	655.763233402536	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279166	21316657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_21279396_21298995_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310423_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
m54284U_201001_173734/59050804/ccs	chr18	+	197	1	Intergenic	novelGene_9035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTATGATTTTGTTTGT	NA	False	NA	NA	False	AATAGA	-11	NA	77766409	77766606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_77766400_77766600
m54284U_201001_173734/590946/ccs	chr10	+	1516	1	Intergenic	novelGene_5379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACACAAAACAACCCTGC	NA	False	NA	NA	False	NA	NA	NA	68074796	68076312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_68074800_68076300
m54284U_201001_173734/59312646/ccs	chr5	+	180	1	Intergenic	novelGene_2948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATCCTAATTCTT	NA	False	NA	NA	False	NA	NA	NA	129966446	129966626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_129966400_129966600
m54284U_201001_173734/5965070/ccs	chr2	-	181	1	FSM	ENSMUSG00000104277.2	ENSMUST00000193214.2	3789	1	2490	1118	2490	-1118	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTACATTGCAGATGTAA	NA	False	NA	-1	True	NA	NA	NA	32889837	32889656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_32889700_32889800
m54284U_201001_173734/59901194/ccs	chr6	+	4286	1	NIC	ENSMUSG00000079426.14	novel	2270	6	NA	NA	0	-6537	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113355153	113359439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113355200_113359400
m54284U_201001_173734/59965490/ccs	chr5	-	2412	15	NNC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-77	0	at_least_one_novel_splicesite	TRUE	canonical	1	29	junction_14	565.543210063546	3120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2243	False	NA	-25	True	AATAAA	-15	NA	138170157	138162861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168653_138169987
m54284U_201001_173734/60032319/ccs	chr8	-	1053	5	NNC	ENSMUSG00000031821.12	novel	3900	5	NA	NA	-58	280	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	482.541384235591	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAGAACGGGTTTAATT	NA	False	NA	91	True	AATACA	-18	NA	121315831	121308002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_121308551_121308820_121308948_121312831_121312932_121315467_121315579_121315664
m54284U_201001_173734/60295453/ccs	chr8	-	3774	24	NNC	ENSMUSG00000031715.15	novel	6113	24	NA	NA	0	-2332	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_6	318.453938824941	937	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTTCATTTGATTTA	NA	False	NA	-21	True	AATAAA	-19	NA	81466126	81427467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435748_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
m54284U_201001_173734/60687094/ccs	chr3	-	3680	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_25	237.934525447653	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTATGCTTTTATGTC	3940	False	NA	NA	False	AATAAA	-18	NA	89959389	89913300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959335
m54284U_201001_173734/60687814/ccs	chr19	-	155	1	Intergenic	novelGene_9133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAGTAAATAAA	9097	False	NA	NA	False	NA	NA	NA	7030893	7030738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7030700_7030900
m54284U_201001_173734/60819901/ccs	chr7	-	1151	1	NIC	ENSMUSG00000060591.10	novel	655	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTCACTGTTCTCT	NA	False	NA	-12	True	AATAAA	-22	NA	140535900	140534749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140534700_140535900
m54284U_201001_173734/60950498/ccs	chr14	-	177	1	Intergenic	novelGene_7572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAAGCAACAT	NA	False	NA	NA	False	NA	NA	NA	96425470	96425293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_96425300_96425500
m54284U_201001_173734/61145522/ccs	chr13	+	250	1	Intergenic	novelGene_7240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCAGGCCAGCCTAAG	NA	False	NA	NA	False	NA	NA	NA	93766577	93766827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_93766600_93766800
m54284U_201001_173734/61146936/ccs	chr9	-	176	1	Intergenic	novelGene_4809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGAATTCTT	NA	False	NA	NA	False	NA	NA	NA	58143786	58143610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58143600_58143800
m54284U_201001_173734/61344422/ccs	chr11	-	2950	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	-76	1319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	461.390758575381	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTGTTCTGAATATCAA	NA	False	NA	-31	True	ATTAAA	-29	NA	53191360	53152387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_53152643_53153087_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
m54284U_201001_173734/61474167/ccs	chr13	+	172	1	Intergenic	novelGene_7133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTCCATGTCTG	NA	False	NA	NA	False	NA	NA	NA	59887946	59888118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_59887900_59888100
m54284U_201001_173734/61475091/ccs	chr10	-	172	1	Intergenic	novelGene_5302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGATGTGAGTGAGGTC	NA	False	NA	NA	False	NA	NA	NA	57492852	57492680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_57492700_57492900
m54284U_201001_173734/62130019/ccs	chr13	-	180	1	Intergenic	novelGene_7066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGAAAATCTATTGGC	NA	False	NA	NA	False	NA	NA	NA	51234337	51234157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_51234200_51234300
m54284U_201001_173734/62194291/ccs	chr15	-	177	1	Intergenic	novelGene_7926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATATTCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	96821519	96821342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_96821300_96821500
m54284U_201001_173734/62392870/ccs	chr11	+	176	1	Intergenic	novelGene_6439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATTGTCTGATC	NA	False	NA	NA	False	NA	NA	NA	113742027	113742203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_113742000_113742200
m54284U_201001_173734/62522434/ccs	chr18	+	176	1	Intergenic	novelGene_8994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGCTGTCACAGAG	4941	False	NA	NA	False	NA	NA	NA	66514815	66514991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_66514800_66515000
m54284U_201001_173734/62654450/ccs	chr9	+	174	1	Intergenic	novelGene_5125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATCTGAATAAA	NA	False	NA	NA	False	NA	NA	NA	114221115	114221289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_114221100_114221300
m54284U_201001_173734/63176844/ccs	chr15	+	177	1	Intergenic	novelGene_7991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATAAGGGTTGTA	3578	False	NA	NA	False	NA	NA	NA	100464780	100464957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_100464800_100465000
m54284U_201001_173734/63375383/ccs	chr4	+	174	1	Intergenic	novelGene_2186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAATATATATA	NA	False	NA	NA	False	NA	NA	NA	131905150	131905324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_131905200_131905300
m54284U_201001_173734/63440209/ccs	chr4	+	194	1	Intergenic	novelGene_1953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGCTAGGCAGTGAT	NA	False	NA	NA	False	NA	NA	NA	100657457	100657651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_100657500_100657700
m54284U_201001_173734/6357005/ccs	chr6	+	181	1	Intergenic	novelGene_3433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGACATGCCCACTTGTGG	NA	False	NA	NA	False	NA	NA	NA	115977205	115977386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_115977200_115977400
m54284U_201001_173734/6358991/ccs	chr8	+	179	1	Intergenic	novelGene_4477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAGAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	108161366	108161545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_108161400_108161500
m54284U_201001_173734/63638231/ccs	chr11	+	3092	1	Intergenic	novelGene_6431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGGTCAGAATAATCCT	NA	False	NA	10	True	AATAAA	-18	NA	110410742	110413834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_110410700_110413800
m54284U_201001_173734/63769051/ccs	chr1	+	183	1	Intergenic	novelGene_495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTGTTACGTGAATAT	NA	False	NA	NA	False	NA	NA	NA	178087016	178087199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_178087000_178087200
m54284U_201001_173734/6425281/ccs	chr6	-	200	1	Intergenic	novelGene_3201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTATTAT	5814	False	NA	NA	False	NA	NA	NA	38340118	38339918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38339900_38340100
m54284U_201001_173734/64291713/ccs	chr4	+	202	1	Intergenic	novelGene_2009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAGAGTCCCTGATGAG	NA	False	NA	NA	False	NA	NA	NA	115899067	115899269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_115899100_115899300
m54284U_201001_173734/64292432/ccs	chr7	-	456	3	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	-222	-1270	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	528	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGTCTAACTTCCAAGG	7778	False	NA	-31	True	AGTAAA	-19	NA	141055267	141053042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_141053318_141054940_141055056_141055201
m54284U_201001_173734/64356947/ccs	chrX	+	3715	1	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	21829	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158372362	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_158372400_158376100
m54284U_201001_173734/64424634/ccs	chr5	-	163	1	Intergenic	novelGene_3084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAACAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	148807941	148807778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_148807800_148807900
m54284U_201001_173734/64618729/ccs	chr15	+	195	1	Intergenic	novelGene_7635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCAGAATGGGCTTTCC	NA	False	NA	NA	False	NA	NA	NA	9899884	9900079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_9899900_9900100
m54284U_201001_173734/64618869/ccs	chr16	+	175	1	Intergenic	novelGene_8157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGTCATAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	21925168	21925343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_21925200_21925300
m54284U_201001_173734/6488116/ccs	chr11	+	184	1	Intergenic	novelGene_5697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATTGAGACGTGGG	NA	False	NA	NA	False	NA	NA	NA	8493039	8493223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_8493000_8493200
m54284U_201001_173734/64947712/ccs	chr7	+	1245	3	NIC	ENSMUSG00000030432.13	novel	772	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	6459	junction_1	95	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCTCATTGAGCT	2809	False	NA	17	True	AATAAA	-32	NA	4795988	4797561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4796409_4796501_4797182_4797416
m54284U_201001_173734/65726/ccs	chr1	+	180	1	Intergenic	novelGene_537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	184618697	184618877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_184618700_184618900
m54284U_201001_173734/657699/ccs	chr11	+	187	1	Intergenic	novelGene_6212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTGTTTGAGAAGCCA	NA	False	NA	NA	False	NA	NA	NA	94293082	94293269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94293100_94293300
m54284U_201001_173734/65799336/ccs	chr19	+	10511	1	ISM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	19402	0	9026	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCGTGCTCTTGTATTC	1190	False	NA	6	True	AATAAA	-19	NA	8986049	8996560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_8986000_8996600
m54284U_201001_173734/66060966/ccs	chr1	-	169	1	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTTTTTTAAG	167	False	NA	NA	False	NA	NA	NA	33757801	33757632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_33757600_33757800
m54284U_201001_173734/66225/ccs	chr17	-	172	1	Intergenic	novelGene_8461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAACTGATGTATTTTC	NA	False	NA	NA	False	NA	NA	NA	28699969	28699797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_28699800_28700000
m54284U_201001_173734/66652660/ccs	chr6	-	190	1	Intergenic	novelGene_3174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTAATATTCCTTTGTG	NA	False	NA	NA	False	NA	NA	NA	35156410	35156220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_35156200_35156400
m54284U_201001_173734/66716239/ccs	chr7	-	184	1	Intergenic	novelGene_3620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAATAAGAGAGCAG	NA	False	NA	NA	False	NA	NA	NA	3522262	3522078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3522100_3522300
m54284U_201001_173734/66718314/ccs	chr13	+	196	1	Intergenic	novelGene_7190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTGCCCAAGCTAGC	NA	False	NA	NA	False	NA	NA	NA	67550693	67550889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_67550700_67550900
m54284U_201001_173734/66783556/ccs	chr8	+	272	1	Intergenic	novelGene_4515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGTTTTAAAAAATTCAAG	NA	False	NA	NA	False	TTTAAA	-13	NA	112479310	112479582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112479300_112479600
m54284U_201001_173734/6685552/ccs	chr12	+	194	1	Intergenic	novelGene_6621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGATTTGGGAATAACT	NA	False	NA	NA	False	NA	NA	NA	36064190	36064384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_36064200_36064400
m54284U_201001_173734/67025/ccs	chr6	-	177	1	Intergenic	novelGene_3290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATGGGAGGTAATCTT	NA	False	NA	NA	False	NA	NA	NA	55137364	55137187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_55137200_55137400
m54284U_201001_173734/67044632/ccs	chr15	+	173	1	Antisense	novelGene_ENSMUSG00000022559.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTTTAAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	76419748	76419921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_+_76419700_76419900
m54284U_201001_173734/67240435/ccs	chr17	+	176	1	Intergenic	novelGene_8602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAATTTAGCACGTGC	NA	False	NA	NA	False	NA	NA	NA	45832713	45832889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_45832700_45832900
m54284U_201001_173734/67305921/ccs	chr10	+	203	1	Intergenic	novelGene_5465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	955	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACCTTTACTAAAGGAAAG	3771	False	NA	37	True	NA	NA	NA	81210828	81211031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_81210800_81211000
m54284U_201001_173734/67437806/ccs	chr15	-	174	1	Intergenic	novelGene_7962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTATTTTTTATCTTT	2896	False	NA	-2	True	NA	NA	NA	99284303	99284129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99284100_99284300
m54284U_201001_173734/6750884/ccs	chr3	-	5254	15	NIC	ENSMUSG00000062232.15	novel	6544	24	NA	NA	52203	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	14.4610666611973	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTCTAAACTTTTCAT	NA	False	NA	-18	True	AATAAA	-16	NA	79000081	78969834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006
m54284U_201001_173734/67635763/ccs	chrX	-	180	1	Intergenic	novelGene_9549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	99595191	99595011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_99595000_99595200
m54284U_201001_173734/67698954/ccs	chr18	+	149	1	Intergenic	novelGene_8919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGTTAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	37970234	37970383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_37970200_37970400
m54284U_201001_173734/67700153/ccs	chr4	-	4830	1	FSM	ENSMUSG00000083642.2	ENSMUST00000118892.2	745	1	0	-4085	0	4085	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGATTGCGGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	147831018	147826188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_147826200_147831000
m54284U_201001_173734/67766170/ccs	chr5	+	850	1	Intergenic	novelGene_2875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	99	False	NA	NA	False	NA	NA	NA	123036325	123037175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123036300_123037200
m54284U_201001_173734/67830852/ccs	chr19	-	3210	18	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	149.18440320345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGCTGTGGATATTGTGA	NA	False	NA	34	True	AATAAA	-15	NA	9876853	9849705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855793_9860555_9860568_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
m54284U_201001_173734/67898190/ccs	chr6	+	348	1	Intergenic	novelGene_3494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAATAAAAACTGGG	362	False	NA	NA	False	NA	NA	NA	124663562	124663910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_124663600_124663900
m54284U_201001_173734/68157567/ccs	chr10	+	176	1	Intergenic	novelGene_5517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATATACTGTCCAA	NA	False	NA	NA	False	NA	NA	NA	95487405	95487581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_95487400_95487600
m54284U_201001_173734/6817364/ccs	chr4	-	173	1	Intergenic	novelGene_2305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAATAGCGGCT	NA	False	NA	NA	False	NA	NA	NA	141184417	141184244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_141184200_141184400
m54284U_201001_173734/68682694/ccs	chr1	+	165	1	Intergenic	novelGene_269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAGAAATATTA	NA	False	NA	NA	False	NA	NA	NA	113451361	113451526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_113451400_113451500
m54284U_201001_173734/69076409/ccs	chr3	+	180	1	Intergenic	novelGene_1442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAGAGAGAGA	9	False	NA	NA	False	NA	NA	NA	79345351	79345531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_79345400_79345500
m54284U_201001_173734/69796031/ccs	chr10	+	188	1	Intergenic	novelGene_5303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTCCAAATAATAATGT	NA	False	NA	NA	False	NA	NA	NA	58139588	58139776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_58139600_58139800
m54284U_201001_173734/69927561/ccs	chr6	+	4223	30	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	95.774643835947	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116184998	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195624_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201001_173734/7013028/ccs	chr2	+	175	1	Intergenic	novelGene_870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAGCTCACAG	NA	False	NA	NA	False	NA	NA	NA	75446314	75446489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_75446300_75446500
m54284U_201001_173734/70191374/ccs	chr12	+	158	1	Intergenic	novelGene_6867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTGGG	5460	False	NA	NA	False	NA	NA	NA	105025588	105025746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105025600_105025700
m54284U_201001_173734/70256581/ccs	chr7	-	174	1	Intergenic	novelGene_4029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	110726986	110726812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_110726800_110727000
m54284U_201001_173734/70386203/ccs	chr4	+	362	1	Intergenic	novelGene_2195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	132284485	132284847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132284500_132284800
m54284U_201001_173734/70453394/ccs	chr4	+	196	1	Intergenic	novelGene_2219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAAGAGCCTCTCC	NA	False	NA	NA	False	NA	NA	NA	133354750	133354946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133354800_133354900
m54284U_201001_173734/70584538/ccs	chr8	-	172	1	Intergenic	novelGene_4466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	107754245	107754073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107754100_107754200
m54284U_201001_173734/70713872/ccs	chr7	+	186	1	Intergenic	novelGene_3646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGGAGATGAGAGCAT	NA	False	NA	NA	False	NA	NA	NA	11859976	11860162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_11860000_11860200
m54284U_201001_173734/70846682/ccs	chr6	+	184	1	Intergenic	novelGene_3268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAAGATGTATTTATTT	3565	False	NA	NA	False	NA	NA	NA	51481041	51481225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_51481000_51481200
m54284U_201001_173734/71041560/ccs	chr17	+	173	1	Intergenic	novelGene_8504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAAACTGATCATT	NA	False	NA	NA	False	NA	NA	NA	30219801	30219974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_30219800_30220000
m54284U_201001_173734/71042151/ccs	chr14	+	174	1	Intergenic	novelGene_7379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATTCTAGGATAT	NA	False	NA	NA	False	NA	NA	NA	30230469	30230643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_30230500_30230600
m54284U_201001_173734/71172313/ccs	chr5	-	176	1	Intergenic	novelGene_2535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAATGCACTATC	NA	False	NA	-1	True	NA	NA	NA	33191146	33190970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_33191000_33191100
m54284U_201001_173734/71174709/ccs	chr2	-	2095	1	Intergenic	novelGene_1141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGTGGTGGCACACGCC	NA	False	NA	NA	False	NA	NA	NA	154288412	154286317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_154286300_154288400
m54284U_201001_173734/71369934/ccs	chr7	+	200	1	Intergenic	novelGene_4129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGTCATCTTC	NA	False	NA	NA	False	NA	NA	NA	132448707	132448907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_132448700_132448900
m54284U_201001_173734/71370404/ccs	chrX	+	191	1	Intergenic	novelGene_9495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAGTGACTTTTAATAG	NA	False	NA	NA	False	NA	NA	NA	72403308	72403499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_72403300_72403500
m54284U_201001_173734/71371037/ccs	chr7	+	949	1	FSM	ENSMUSG00000052629.6	ENSMUST00000064591.5	2205	1	-258	1514	-258	-1514	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCGAGCTATTTCCTG	NA	False	NA	12	True	AATAAA	-19	NA	78228319	78229268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_78228300_78229300
m54284U_201001_173734/71827767/ccs	chr11	+	187	1	Intergenic	novelGene_5783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGCAGTGTGATCTTA	5139	False	NA	NA	False	NA	NA	NA	43603817	43604004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_43603800_43604000
m54284U_201001_173734/71895096/ccs	chr1	+	217	1	Intergenic	novelGene_417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAATAAAAGAAAAGTTACA	NA	False	NA	NA	False	NA	NA	NA	156777201	156777418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156777200_156777400
m54284U_201001_173734/72353497/ccs	chr18	+	369	1	Intergenic	novelGene_8906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGAGATGTGA	NA	False	NA	NA	False	NA	NA	NA	36068648	36069017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_36068600_36069000
m54284U_201001_173734/72549991/ccs	chr1	+	172	1	Intergenic	novelGene_382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATGTCCCAACACTTCT	6397	False	NA	NA	False	NA	NA	NA	153357744	153357916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_153357700_153357900
m54284U_201001_173734/72550661/ccs	chr9	-	3178	7	NIC	ENSMUSG00000059475.14	novel	3557	7	NA	NA	0	-217	intron_retention	FALSE	canonical	2	5	junction_6	11.2694276695846	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTATGACTTTGCTGC	NA	False	NA	-6	True	NA	NA	NA	20404042	20380220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_20382542_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20403681
m54284U_201001_173734/72614320/ccs	chr11	-	177	1	Intergenic	novelGene_6417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTGATTGATTTTTTT	2839	False	NA	NA	False	TTTAAA	-4	NA	107345365	107345188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107345200_107345400
m54284U_201001_173734/7276302/ccs	chr7	+	174	1	ISM	ENSMUSG00000025505.17	ENSMUST00000134221.2	749	2	92	2224	92	596	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGATGAGC	6589	False	NA	NA	False	NA	NA	NA	140913662	140913836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_140913700_140913800
m54284U_201001_173734/72812682/ccs	chr8	-	2589	6	NNC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2045	intron_retention	FALSE	canonical	2	8	junction_2	337.959524203713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTCTCTTTAAATTGC	NA	False	NA	65	True	AATAGA	-17	NA	66939173	66929026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_66929562_66930666_66930710_66932989_66933141_66934114_66934200_66935157_66936823_66939063
m54284U_201001_173734/73007605/ccs	chr2	+	1446	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	2	1321	junction_7	6401.42287754393	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATACAACAGGAAAAGAA	NA	False	NA	-12	True	NA	NA	NA	29956410	29961130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960614_29960930
m54284U_201001_173734/73138822/ccs	chr11	+	175	1	Intergenic	novelGene_5749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATTCATAGTAG	1627	False	NA	NA	False	NA	NA	NA	24159932	24160107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_24159900_24160100
m54284U_201001_173734/73139321/ccs	chr19	+	201	1	Intergenic	novelGene_9235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGAAACGTCTAAGTTG	NA	False	NA	NA	False	NA	NA	NA	36954167	36954368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_36954200_36954400
m54284U_201001_173734/73401061/ccs	chr17	+	175	1	Intergenic	novelGene_8682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGCTCTCAATT	NA	False	NA	2	True	NA	NA	NA	66267527	66267702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_66267500_66267700
m54284U_201001_173734/73729180/ccs	chr5	+	179	1	Intergenic	novelGene_2495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCTTTAAAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	25747676	25747855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_25747700_25747900
m54284U_201001_173734/73924741/ccs	chr3	+	222	1	Intergenic	novelGene_1478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTCTGAAGGCAGAGGCA	933	False	NA	NA	False	NA	NA	NA	88044073	88044295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88044100_88044300
m54284U_201001_173734/73925945/ccs	chr15	-	167	1	Intergenic	novelGene_7932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	97552151	97551984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_97552000_97552200
m54284U_201001_173734/73992857/ccs	chr3	+	152	1	Intergenic	novelGene_1393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAATTCAAGCCTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	51265168	51265320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_51265200_51265300
m54284U_201001_173734/7407872/ccs	chr1	+	176	1	Intergenic	novelGene_394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAACTGTCAATTC	NA	False	NA	NA	False	NA	NA	NA	154888595	154888771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_154888600_154888800
m54284U_201001_173734/74121239/ccs	chr3	+	192	1	Intergenic	novelGene_1552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAAATAAGACATTA	NA	False	NA	NA	False	NA	NA	NA	93869019	93869211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_93869000_93869200
m54284U_201001_173734/74188097/ccs	chr19	+	160	1	Intergenic	novelGene_9165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	12496750	12496910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_12496800_12496900
m54284U_201001_173734/74319278/ccs	chr5	+	193	1	Intergenic	novelGene_2636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAATAAAGCC	104	False	NA	NA	False	NA	NA	NA	77407681	77407874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_77407700_77407900
m54284U_201001_173734/74383688/ccs	chr11	-	176	1	Intergenic	novelGene_6284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAATTGTTTTTAAT	5878	False	NA	NA	False	NA	NA	NA	97722505	97722329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97722300_97722500
m54284U_201001_173734/74449206/ccs	chr11	+	162	1	Intergenic	novelGene_5954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAGAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	69817059	69817221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69817100_69817200
m54284U_201001_173734/74515365/ccs	chr17	+	184	1	Intergenic	novelGene_8518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	486	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAGAAATGTTTA	NA	False	NA	NA	False	AATAAA	-6	NA	32331641	32331825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32331600_32331800
m54284U_201001_173734/7473387/ccs	chr13	+	1424	1	NIC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	0	-5053	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATATATGGAATAGTTG	NA	False	NA	NA	False	NA	NA	NA	55862462	55863886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55862500_55863900
m54284U_201001_173734/75104595/ccs	chr4	+	183	1	Intergenic	novelGene_1842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTTGCTAAACATTTAC	1666	False	NA	NA	False	NA	NA	NA	44886607	44886790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_44886600_44886800
m54284U_201001_173734/75628549/ccs	chr1	-	178	1	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGAATTTAATATTG	NA	False	NA	NA	False	NA	NA	NA	16822109	16821931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_16821900_16822100
m54284U_201001_173734/75826183/ccs	chr8	+	211	1	Intergenic	novelGene_4419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATCACAGGGGACAAAGA	NA	False	NA	NA	False	NA	NA	NA	96520679	96520890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_96520700_96520900
m54284U_201001_173734/75957670/ccs	chr4	+	205	1	Intergenic	novelGene_2133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGACTAAGACTATCTAT	NA	False	NA	NA	False	TTTAAA	-7	NA	127343301	127343506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_127343300_127343500
m54284U_201001_173734/76220656/ccs	chr10	-	209	1	Intergenic	novelGene_5423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGGTTTTTTTAAATGC	NA	False	NA	NA	False	NA	NA	NA	76783466	76783257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_76783300_76783500
m54284U_201001_173734/76285949/ccs	chr13	+	199	1	Intergenic	novelGene_7001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATATTTGAGTGGGAA	NA	False	NA	NA	False	NA	NA	NA	25786350	25786549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_25786400_25786500
m54284U_201001_173734/7668044/ccs	chr6	+	177	1	Intergenic	novelGene_3194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCATGCAT	6797	False	NA	NA	False	NA	NA	NA	38291268	38291445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38291300_38291400
m54284U_201001_173734/7668425/ccs	chr12	-	182	1	Intergenic	novelGene_6790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTGTTTGCCATGCTGA	NA	False	NA	NA	False	NA	NA	NA	83890850	83890668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_83890700_83890800
m54284U_201001_173734/77202594/ccs	chr8	-	171	1	Intergenic	novelGene_4357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAATTTTTTTAAAAGT	NA	False	NA	NA	False	NA	NA	NA	80359351	80359180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_80359200_80359400
m54284U_201001_173734/77268815/ccs	chr4	-	197	1	Intergenic	novelGene_2108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTGCTTGAGCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	125165829	125165632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_125165600_125165800
m54284U_201001_173734/7734676/ccs	chr9	+	182	1	Intergenic	novelGene_5037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGCAGTTATACAGACC	NA	False	NA	NA	False	NA	NA	NA	100829543	100829725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_100829500_100829700
m54284U_201001_173734/7734959/ccs	chr11	+	198	1	Intergenic	novelGene_6325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAAACAGCTTAATG	NA	False	NA	NA	False	NA	NA	NA	100704051	100704249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_100704100_100704200
m54284U_201001_173734/77529198/ccs	chr4	+	5387	1	FSM	ENSMUSG00000083081.2	ENSMUST00000118609.2	747	1	-522	-4118	-522	4118	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGGTTGTCCTGAGTG	NA	False	NA	NA	False	NA	NA	NA	145181680	145187067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_145181700_145187100
m54284U_201001_173734/77725969/ccs	chr7	+	193	1	Intergenic	novelGene_4128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATCCCAGTTTTGATTT	NA	False	NA	NA	False	NA	NA	NA	132189695	132189888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_132189700_132189900
m54284U_201001_173734/77728408/ccs	chr2	-	168	1	Intergenic	novelGene_1130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAACCCCACAAA	NA	False	NA	NA	False	NA	NA	NA	152904880	152904712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_152904700_152904900
m54284U_201001_173734/7800220/ccs	chr2	+	175	1	Intergenic	novelGene_1108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGACACTGATAT	NA	False	NA	NA	False	NA	NA	NA	150020121	150020296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_150020100_150020300
m54284U_201001_173734/7800764/ccs	chr2	-	183	1	Intergenic	novelGene_1286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGTTTAAAAAAATAGCAA	NA	False	NA	NA	False	NA	NA	NA	172263309	172263126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_172263100_172263300
m54284U_201001_173734/78512444/ccs	chr7	+	196	1	Intergenic	novelGene_3854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAAATGCTGGGATTTC	NA	False	NA	NA	False	TTTAAA	-5	NA	46742539	46742735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_46742500_46742700
m54284U_201001_173734/78644270/ccs	chr12	+	186	1	Intergenic	novelGene_6644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGAAAGAAGCTGTCACG	NA	False	NA	NA	False	NA	NA	NA	54852004	54852190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_54852000_54852200
m54284U_201001_173734/7867217/ccs	chr4	+	201	1	Intergenic	novelGene_2125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCCTCTCCAATCAGTC	NA	False	NA	NA	False	NA	NA	NA	126877837	126878038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126877800_126878000
m54284U_201001_173734/79169141/ccs	chr1	+	172	1	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAATAGATATTC	NA	False	NA	NA	False	NA	NA	NA	7067207	7067379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_7067200_7067400
m54284U_201001_173734/79299189/ccs	chr1	+	3370	1	FSM	ENSMUSG00000065160.3	ENSMUST00000083226.3	84	1	-2190	-1096	-2190	1096	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGTGAAGTGTGCATT	NA	False	NA	18	True	ATTAAA	-14	NA	160862735	160866105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_160862700_160866100
m54284U_201001_173734/7930444/ccs	chr18	+	176	1	Intergenic	novelGene_8824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	17170563	17170739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_17170600_17170700
m54284U_201001_173734/7930552/ccs	chr3	-	175	1	Intergenic	novelGene_1383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAACTAGTCTTAGA	NA	False	NA	NA	False	NA	NA	NA	34775182	34775007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_34775000_34775200
m54284U_201001_173734/79366298/ccs	chr11	+	180	1	Intergenic	novelGene_5777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAAAATGTTGAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	36946304	36946484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_36946300_36946500
m54284U_201001_173734/79431758/ccs	chr5	+	121	1	Intergenic	novelGene_2634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAATAAATAAACACATCT	NA	False	NA	NA	False	NA	NA	NA	77380997	77381118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_77381000_77381100
m54284U_201001_173734/79495758/ccs	chr15	+	206	1	Intergenic	novelGene_7663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCATGGGAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	28035184	28035390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_28035200_28035400
m54284U_201001_173734/79496242/ccs	chr4	+	188	1	Intergenic	novelGene_2103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGTTGAGGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	124770442	124770630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_124770400_124770600
m54284U_201001_173734/79497139/ccs	chr13	+	177	1	Intergenic	novelGene_7136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	62338209	62338386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62338200_62338400
m54284U_201001_173734/79563372/ccs	chr7	+	268	1	Intergenic	novelGene_4111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTATGTATGTGAGTG	330	False	NA	NA	False	AAAAAG	-34	NA	127541644	127541912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_127541600_127541900
m54284U_201001_173734/79627826/ccs	chr9	+	203	1	Intergenic	novelGene_5016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCCACCATGCATGG	528	False	NA	NA	False	NA	NA	NA	96392843	96393046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96392800_96393000
m54284U_201001_173734/79823902/ccs	chr1	+	169	1	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATTAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	9861015	9861184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_9861000_9861200
m54284U_201001_173734/79825260/ccs	chr9	+	175	1	Intergenic	novelGene_4637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAACTGTCTAGAAAT	NA	False	NA	NA	False	NA	NA	NA	14583866	14584041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_14583900_14584000
m54284U_201001_173734/79954458/ccs	chr12	+	187	1	Intergenic	novelGene_6628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGTGGTGGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	51263094	51263281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_51263100_51263300
m54284U_201001_173734/80152948/ccs	chr13	+	195	1	Intergenic	novelGene_7119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATGAAGATAGTATGTCC	NA	False	NA	NA	False	NA	NA	NA	57528610	57528805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_57528600_57528800
m54284U_201001_173734/80347929/ccs	chr5	+	402	1	Intergenic	novelGene_2528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTC	9004	False	NA	NA	False	NA	NA	NA	32918348	32918750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_32918300_32918800
m54284U_201001_173734/80480787/ccs	chr3	+	152	1	Intergenic	novelGene_1447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGATTTCTGACTGTT	NA	False	NA	NA	False	NA	NA	NA	79516904	79517056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_79516900_79517100
m54284U_201001_173734/80611750/ccs	chr6	-	186	1	Intergenic	novelGene_3141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTGTGGGTTTCTTTG	NA	False	NA	NA	False	NA	NA	NA	29823295	29823109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_29823100_29823300
m54284U_201001_173734/8062097/ccs	chr8	+	174	1	Intergenic	novelGene_4566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTATTCTTTAAAAAA	1650	False	NA	NA	False	NA	NA	NA	122695870	122696044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_122695900_122696000
m54284U_201001_173734/8063629/ccs	chr4	+	5189	1	Intergenic	novelGene_1798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATTTGAGACCAGAGA	NA	False	NA	NA	False	NA	NA	NA	35030456	35035645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_35030500_35035600
m54284U_201001_173734/80675454/ccs	chr2	-	190	1	FSM	ENSMUSG00000083267.3	ENSMUST00000119555.3	892	1	871	-169	871	169	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAGGCTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	87353846	87353656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_87353700_87353800
m54284U_201001_173734/80741110/ccs	chr6	+	233	1	Intergenic	novelGene_3585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTTTTCCAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	148849657	148849890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_148849700_148849900
m54284U_201001_173734/80742246/ccs	chr1	+	170	1	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGAAAGCTACAC	NA	False	NA	NA	False	NA	NA	NA	24156380	24156550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_24156400_24156600
m54284U_201001_173734/80742877/ccschrUn	chrUn_GL456368v1	+	2048	1	Intergenic	novelGene_9781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAAATGAGGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	6242	8290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_GL456368v1_+_6200_8300
m54284U_201001_173734/80806738/ccs	chr9	+	181	1	Intergenic	novelGene_5149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTCTTTTAAAACGTTT	NA	False	NA	NA	False	NA	NA	NA	119970858	119971039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_119970900_119971000
m54284U_201001_173734/80939290/ccs	chr14	+	186	1	Intergenic	novelGene_7417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCTTTTTTTTTAAGT	2481	False	NA	NA	False	NA	NA	NA	47003867	47004053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_47003900_47004100
m54284U_201001_173734/81002638/ccs	chr10	+	190	1	Intergenic	novelGene_5541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTTTACGGTCTAAGCA	NA	False	NA	NA	False	NA	NA	NA	115013105	115013295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_115013100_115013300
m54284U_201001_173734/81069147/ccs	chr3	+	177	1	Intergenic	novelGene_1368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4731	False	NA	NA	False	NA	NA	NA	29158953	29159130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_29159000_29159100
m54284U_201001_173734/81136290/ccs	chr15	-	192	1	Intergenic	novelGene_7799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAATCGCTAACCCTAC	1182	False	NA	NA	False	NA	NA	NA	77776596	77776404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_77776400_77776600
m54284U_201001_173734/81266474/ccs	chr5	+	177	1	Intergenic	novelGene_2648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAATTTGTTA	1689	False	NA	NA	False	NA	NA	NA	88570161	88570338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_88570200_88570300
m54284U_201001_173734/81790178/ccs	chr13	-	206	1	Intergenic	novelGene_7121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGCCGGGTGTGGTAA	NA	False	NA	NA	False	NA	NA	NA	58313437	58313231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58313200_58313400
m54284U_201001_173734/81856230/ccs	chr1	-	2296	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	-273	1974	-273	-1974	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGAGGTGGTGGCAGT	NA	False	NA	NA	False	AATAAA	-17	NA	88630216	88627920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_88627900_88630200
m54284U_201001_173734/81856501/ccs	chr16	+	170	1	Intergenic	novelGene_8283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAATCACTACG	NA	False	NA	NA	False	NA	NA	NA	55876047	55876217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_55876000_55876200
m54284U_201001_173734/8192267/ccs	chr18	+	204	1	Intergenic	novelGene_9048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTTTCTGCATTATC	4654	False	NA	NA	False	NA	NA	NA	80211848	80212052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_80211800_80212100
m54284U_201001_173734/82053206/ccs	chr10	-	207	1	Intergenic	novelGene_5360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGACGGCAACTATGGCC	NA	False	NA	NA	False	NA	NA	NA	62819131	62818924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62818900_62819100
m54284U_201001_173734/82117417/ccs	chr7	+	184	1	Intergenic	novelGene_3678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAATAAAAGTCCCC	5064	False	NA	NA	False	NA	NA	NA	18732096	18732280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_18732100_18732300
m54284U_201001_173734/82248677/ccs	chr5	-	178	1	Intergenic	novelGene_2653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATTAAACATC	NA	False	NA	NA	False	NA	NA	NA	89826093	89825915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_89825900_89826100
m54284U_201001_173734/82379128/ccs	chr3	-	200	1	Intergenic	novelGene_1507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAGGTCATCCTTGGAG	NA	False	NA	NA	False	NA	NA	NA	88870679	88870479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88870500_88870700
m54284U_201001_173734/82446038/ccs	chr11	-	182	1	ISM	ENSMUSG00000020891.12	ENSMUST00000021262.10	3226	14	13418	312	12959	-312	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAGAGAGAGGGACA	NA	False	NA	NA	False	NA	NA	NA	69075251	69075069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_69075100_69075300
m54284U_201001_173734/82970015/ccs	chr11	+	173	1	Intergenic	novelGene_6259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAATTAATTAAAAAAAAAA	2048	False	NA	NA	False	NA	NA	NA	96969074	96969247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_96969100_96969200
m54284U_201001_173734/82970402/ccs	chr9	-	181	1	Intergenic	novelGene_4639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATACTTAAGGGT	NA	False	NA	NA	False	NA	NA	NA	14790762	14790581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_14790600_14790800
m54284U_201001_173734/83232032/ccs	chr2	+	441	3	Fusion	ENSMUSG00000094786.2_ENSMUSG00000074521.10	novel	192	2	NA	NA	0	146	multi-exon	FALSE	canonical	0	0	junction_1	14	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATGTAATTATTGTTTG	NA	False	NA	NA	False	NA	NA	NA	177190007	177546622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177190111_177546077_177546205_177546411
m54284U_201001_173734/83493754/ccs	chr14	-	171	1	Intergenic	novelGene_7365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAATAACCTTGTTA	NA	False	NA	NA	False	NA	NA	NA	26380391	26380220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26380200_26380400
m54284U_201001_173734/83561110/ccs	chr4	+	176	1	Intergenic	novelGene_2116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATATTTATATAAATAA	NA	False	NA	NA	False	NA	NA	NA	126440757	126440933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126440800_126440900
m54284U_201001_173734/83690623/ccs	chr11	+	204	1	Intergenic	novelGene_6263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAGACTCAGTGACAT	NA	False	NA	NA	False	AAGAAA	-5	NA	97081450	97081654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97081400_97081700
m54284U_201001_173734/83692066/ccs	chr13	+	185	1	Intergenic	novelGene_7324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATGTTAAAAGAACTGTC	NA	False	NA	NA	False	NA	NA	NA	117370692	117370877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_117370700_117370900
m54284U_201001_173734/83822960/ccs	chr8	-	204	1	Intergenic	novelGene_4260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTAGTTTGTTACCCAGC	NA	False	NA	NA	False	NA	NA	NA	34190932	34190728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_34190700_34190900
m54284U_201001_173734/83952663/ccs	chr1	-	7941	45	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	424	0	intron_retention	TRUE	canonical	2	4	junction_43	553.007940757926	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71691896	71624678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71690679_71690809_71691792
m54284U_201001_173734/84149427/ccs	chr12	+	265	1	Intergenic	novelGene_6543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCCACATTTAGGGTTG	NA	False	NA	NA	False	AAGAAA	-4	NA	4175210	4175475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_4175200_4175500
m54284U_201001_173734/84214468/ccs	chr11	+	176	1	Intergenic	novelGene_6199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATTGTGTGTGAA	NA	False	NA	NA	False	NA	NA	NA	88888200	88888376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_88888200_88888400
m54284U_201001_173734/84347181/ccs	chr17	+	204	1	Intergenic	novelGene_8632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAATAAATCATAATAG	NA	False	NA	NA	False	NA	NA	NA	47881326	47881530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47881300_47881500
m54284U_201001_173734/84477462/ccs	chr5	+	189	1	Intergenic	novelGene_2727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTTAGGTCAGGACTT	NA	False	NA	NA	False	NA	NA	NA	107132895	107133084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_107132900_107133100
m54284U_201001_173734/84477846/ccs	chr5	+	182	1	Intergenic	novelGene_2896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATAGCATCCTG	NA	False	NA	NA	False	NA	NA	NA	124418854	124419036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_124418900_124419000
m54284U_201001_173734/84477949/ccs	chr1	-	303	1	Intergenic	novelGene_220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGAAGAAGAACT	NA	False	NA	NA	False	NA	NA	NA	84939271	84938968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_84939000_84939300
m54284U_201001_173734/8456637/ccs	chr3	+	117	1	Intergenic	novelGene_1454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	85844719	85844836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_85844700_85844800
m54284U_201001_173734/84738071/ccs	chrX	-	177	1	Intergenic	novelGene_9483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	59283105	59282928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_59282900_59283100
m54284U_201001_173734/84739805/ccs	chr11	+	5462	1	Antisense	novelGene_ENSMUSG00000040594.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGATTAGGCACACAG	NA	False	NA	NA	False	NA	NA	NA	33432913	33438375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_33432900_33438400
m54284U_201001_173734/85002550/ccs	chr1	+	183	1	Intergenic	novelGene_282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTTCTCTAAATGCTT	NA	False	NA	NA	False	NA	NA	NA	121481022	121481205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_121481000_121481200
m54284U_201001_173734/85066951/ccs	chr9	+	184	1	Intergenic	novelGene_5138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGATGTGGAA	NA	False	NA	NA	False	NA	NA	NA	118196221	118196405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_118196200_118196400
m54284U_201001_173734/85197388/ccs	chr17	+	202	1	Intergenic	novelGene_8606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCACCTCTGCCCCTTC	NA	False	NA	NA	False	NA	NA	NA	45948209	45948411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_45948200_45948400
m54284U_201001_173734/8520716/ccs	chr17	+	192	1	Intergenic	novelGene_8556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCACAGCCATCTTAGCTT	NA	False	NA	NA	False	NA	NA	NA	35635653	35635845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35635700_35635800
m54284U_201001_173734/85263882/ccs	chr7	+	188	1	Intergenic	novelGene_4027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAGACAGAATTATAC	NA	False	NA	NA	False	NA	NA	NA	110693072	110693260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_110693100_110693300
m54284U_201001_173734/854166/ccs	chr3	+	173	1	Intergenic	novelGene_1551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAGAAGTACCCTGG	NA	False	NA	4	True	NA	NA	NA	93491221	93491394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_93491200_93491400
m54284U_201001_173734/854258/ccs	chr12	+	178	1	Intergenic	novelGene_6591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAGAAGCCTATTTCA	NA	False	NA	NA	False	NA	NA	NA	21946341	21946519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_21946300_21946500
m54284U_201001_173734/85527246/ccs	chr8	-	192	1	Intergenic	novelGene_4248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	27637068	27636876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_27636900_27637100
m54284U_201001_173734/85723146/ccs	chr9	+	3192	1	FSM	ENSMUSG00000063058.3	ENSMUST00000071302.3	881	1	277	-2588	277	2588	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAAGACTCTAGTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	98738823	98742015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_98738800_98742000
m54284U_201001_173734/85787644/ccs	chr12	+	192	1	Intergenic	novelGene_6780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTCTTACCCTCACAGC	4507	False	NA	NA	False	NA	NA	NA	83525070	83525262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_83525100_83525300
m54284U_201001_173734/85787812/ccs	chr10	+	183	1	Intergenic	novelGene_5634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAGAACCAGTCAGTGA	5211	False	NA	NA	False	NA	NA	NA	128464959	128465142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128465000_128465100
m54284U_201001_173734/85984727/ccs	chr13	+	199	1	Intergenic	novelGene_7294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGACAAGTGACTGAACT	NA	False	NA	NA	False	NA	NA	NA	107120701	107120900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_107120700_107120900
m54284U_201001_173734/86182064/ccs	chr14	-	187	1	Intergenic	novelGene_7442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTGTCATCCTTGATG	NA	False	NA	NA	False	NA	NA	NA	52352546	52352359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_52352400_52352500
m54284U_201001_173734/86312352/ccs	chr1	+	187	1	Intergenic	novelGene_171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTGATGCATATGTTC	5696	False	NA	NA	False	NA	NA	NA	71621205	71621392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_71621200_71621400
m54284U_201001_173734/86313621/ccs	chr17	+	182	1	Intergenic	novelGene_8527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGGGTAAGGGCACAAT	NA	False	NA	NA	False	NA	NA	NA	32951377	32951559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32951400_32951600
m54284U_201001_173734/86379265/ccs	chr16	-	219	1	Genic_Genomic	ENSMUSG00000116729.2	novel	NA	NA	NA	NA	-186	-815	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGAAGTATACCCGGT	NA	False	NA	NA	False	AAAAAG	-14	NA	16667748	16667529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_-_16667500_16667700
m54284U_201001_173734/86444079/ccs	chr2	+	1494	1	Intergenic	novelGene_1155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	155153187	155154681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155153200_155154700
m54284U_201001_173734/86641256/ccs	chr6	-	177	1	Intergenic	novelGene_3344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTAATTTTGTGG	6292	False	NA	NA	False	NA	NA	NA	83825451	83825274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_83825300_83825500
m54284U_201001_173734/86772306/ccs	chr3	+	2125	1	Intergenic	novelGene_1646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCGTACTGAGGCATATAA	NA	False	NA	NA	False	NA	NA	NA	116703221	116705346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_116703200_116705300
m54284U_201001_173734/87229456/ccs	chr17	-	1530	3	NNC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	27.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	False	NA	-10	True	AATAAA	-14	NA	24915064	24912163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_24912587_24913141_24913412_24914227
m54284U_201001_173734/87362036/ccs	chr15	+	181	1	Intergenic	novelGene_7827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTATATAAAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	80875603	80875784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_80875600_80875800
m54284U_201001_173734/87425802/ccs	chr1	+	184	1	Intergenic	novelGene_444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGGTTTAGCACCCTCA	NA	False	NA	NA	False	NA	NA	NA	164359081	164359265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_164359100_164359300
m54284U_201001_173734/87493339/ccs	chr2	+	177	1	Intergenic	novelGene_703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAGAGAGAGAGAGAGA	978	False	NA	NA	False	NA	NA	NA	31477842	31478019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_31477800_31478000
m54284U_201001_173734/87818637/ccs	chr2	+	4585	1	Genic_Genomic	ENSMUSG00000078866.11	novel	NA	NA	NA	NA	10457	1758	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	177167095	177171680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_177167100_177171700
m54284U_201001_173734/87819010/ccs	chr5	-	219	1	Intergenic	novelGene_3063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGCCTTAGTTACTAT	NA	False	NA	NA	False	NA	NA	NA	145092872	145092653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_145092700_145092900
m54284U_201001_173734/8783148/ccs	chr15	-	3693	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	0	345	intron_retention	FALSE	canonical	1	53	junction_15	769.632856343863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCTCTGTCCTCACG	NA	False	NA	-5	True	AATAAA	-18	NA	11399687	11383745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393363_11394309_11394501_11397266_11397348_11399571
m54284U_201001_173734/88081719/ccs	chr4	+	212	1	Intergenic	novelGene_2223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGGCTAGAGAGATGG	NA	False	NA	NA	False	AATAAA	-4	NA	133535971	133536183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133536000_133536200
m54284U_201001_173734/88081956/ccs	chr4	+	160	1	Intergenic	novelGene_2426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAATGTATATATTA	NA	False	NA	NA	False	AATAAA	-6	NA	155448278	155448438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_155448300_155448400
m54284U_201001_173734/88278346/ccs	chr15	-	201	1	Intergenic	novelGene_7806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGCCCTTCTTAGCTCT	NA	False	NA	NA	False	NA	NA	NA	78955817	78955616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_78955600_78955800
m54284U_201001_173734/88278703/ccs	chr1	+	168	1	Intergenic	novelGene_493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGAAATGTAAATAA	NA	False	NA	NA	False	NA	NA	NA	177630621	177630789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_177630600_177630800
m54284U_201001_173734/88343386/ccs	chr13	+	175	1	Intergenic	novelGene_7196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGTACATGCTT	NA	False	NA	NA	False	NA	NA	NA	69287298	69287473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_69287300_69287500
m54284U_201001_173734/88343931/ccs	chr13	+	2450	1	FSM	ENSMUSG00000078302.6	ENSMUST00000105098.6	5064	1	0	2614	0	-2614	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCCACCTAAGTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	98490749	98493199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_98490700_98493200
m54284U_201001_173734/88672054/ccs	chr12	+	145	1	Intergenic	novelGene_6606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTCATATAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	28726790	28726935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_28726800_28726900
m54284U_201001_173734/88803246/ccs	chr1	+	1370	1	ISM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	29266	0	28413	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACTGTTCGTCTGTGTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	93299841	93301211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_93299800_93301200
m54284U_201001_173734/88867391/ccs	chr2	+	173	1	Intergenic	novelGene_1231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGGAGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	165790967	165791140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_165791000_165791100
m54284U_201001_173734/8913832/ccs	chr9	+	8003	1	ISM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	50340	0	22604	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTTCCTATGTTTTTT	NA	False	NA	10	True	AATAAA	-15	NA	27260839	27268842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_27260800_27268800
m54284U_201001_173734/8914881/ccs	chrX	+	181	1	Intergenic	novelGene_9418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTATTTAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	35943640	35943821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_35943600_35943800
m54284U_201001_173734/89196642/ccs	chr16	+	311	1	Intergenic	novelGene_8144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAGATGTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20488172	20488483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_20488200_20488500
m54284U_201001_173734/89262068/ccs	chr5	+	141	1	Intergenic	novelGene_2722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTATCATGTTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	106117951	106118092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_106118000_106118100
m54284U_201001_173734/89262624/ccs	chr1	+	168	1	Intergenic	novelGene_543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAACCACAAAGAC	NA	False	NA	NA	False	NA	NA	NA	189431842	189432010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_189431800_189432000
m54284U_201001_173734/89326836/ccs	chr5	+	1686	1	Intergenic	novelGene_2572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCCTTTATTTTCAAGTC	NA	False	NA	NA	False	TTTAAA	-26	NA	52335331	52337017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_52335300_52337000
m54284U_201001_173734/89458593/ccs	chr9	+	188	1	Intergenic	novelGene_5070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGTGTTGACATTAAG	NA	False	NA	NA	False	NA	NA	NA	107071309	107071497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_107071300_107071500
m54284U_201001_173734/89590449/ccs	chr3	-	177	1	Intergenic	novelGene_1389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAATATATT	NA	False	NA	NA	False	NA	NA	NA	49102307	49102130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_49102100_49102300
m54284U_201001_173734/89655898/ccs	chr14	-	186	1	NIC	ENSMUSG00000098183.2	novel	863	2	NA	NA	1029	-197	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGCCAAGTATTTCTTGA	NA	False	NA	NA	False	NA	NA	NA	61863757	61863571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_61863600_61863800
m54284U_201001_173734/89719461/ccs	chr4	+	176	1	Intergenic	novelGene_2277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGGCTTAATT	NA	False	NA	NA	False	NA	NA	NA	138125027	138125203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_138125000_138125200
m54284U_201001_173734/89982786/ccs	chr1	+	173	1	Intergenic	novelGene_284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	123477085	123477258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_123477100_123477300
m54284U_201001_173734/90374859/ccs	chr10	+	187	1	Intergenic	novelGene_5167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGTGCAAATCT	NA	False	NA	NA	False	NA	NA	NA	3569380	3569567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_3569400_3569600
m54284U_201001_173734/90442463/ccs	chr9	+	200	1	Intergenic	novelGene_5044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCCAGGTTTAAACTA	NA	False	NA	NA	False	NA	NA	NA	102517697	102517897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102517700_102517900
m54284U_201001_173734/9046107/ccs	chr9	+	5137	1	Intergenic	novelGene_4766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTACGTCTGTCTCCT	3812	False	NA	NA	False	NA	NA	NA	52073562	52078699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_52073600_52078700
m54284U_201001_173734/9046725/ccs	chr19	+	203	1	Intergenic	novelGene_9245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGTTAAATTCTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	38386827	38387030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_38386800_38387000
m54284U_201001_173734/90637519/ccs	chr6	+	5970	1	Intergenic	novelGene_3394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTAGCCATGTGGGCAGA	170	False	NA	NA	False	NA	NA	NA	94130823	94136793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_94130800_94136800
m54284U_201001_173734/90965021/ccs	chr9	+	122	1	Genic_Genomic	ENSMUSG00000053641.10	novel	NA	NA	NA	NA	-6329	14	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTCATAGGAGAGCCC	1937	False	NA	NA	False	NA	NA	NA	64808149	64808271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_64808100_64808300
m54284U_201001_173734/91031708/ccs	chrX	+	176	1	Intergenic	novelGene_9519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTAACATATGGATTAAT	NA	False	NA	NA	False	NA	NA	NA	86204584	86204760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_86204600_86204800
m54284U_201001_173734/91227349/ccs	chr17	+	2953	17	NIC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	352	junction_13	19.1894339416253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9796	False	NA	11	True	AATAAA	-24	NA	34866174	34874048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
m54284U_201001_173734/91687632/ccs	chr7	+	173	1	Intergenic	novelGene_3631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	4721533	4721706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_4721500_4721700
m54284U_201001_173734/91751307/ccs	chr17	+	174	1	Intergenic	novelGene_8379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATGGC	NA	False	NA	NA	False	NA	NA	NA	15798615	15798789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_15798600_15798800
m54284U_201001_173734/9175624/ccs	chr4	+	167	1	Intergenic	novelGene_1974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCCCAACCATCCTAGAT	NA	False	NA	NA	False	NA	NA	NA	106392789	106392956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_106392800_106393000
m54284U_201001_173734/91818073/ccs	chr14	+	4832	1	Intergenic	novelGene_7388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGGAAGTAAAGAAACTTA	NA	False	NA	NA	False	NA	NA	NA	34014262	34019094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_34014300_34019100
m54284U_201001_173734/918571/ccs	chr16	+	4973	47	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_37	28.3323844312729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241918	21463430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378949_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
m54284U_201001_173734/91947687/ccs	chr2	+	203	1	Intergenic	novelGene_1048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATTCTGATCAGAT	NA	False	NA	NA	False	NA	NA	NA	126431358	126431561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_126431400_126431600
m54284U_201001_173734/92015317/ccs	chr5	-	176	1	Intergenic	novelGene_3032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	142539969	142539793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142539800_142540000
m54284U_201001_173734/92080245/ccs	chr16	+	187	1	Intergenic	novelGene_8324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAGAATTGGGAA	9315	False	NA	NA	False	NA	NA	NA	91234886	91235073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_91234900_91235100
m54284U_201001_173734/92210174/ccs	chr9	-	152	1	Intergenic	novelGene_5158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAATAAATATTTTT	NA	False	NA	NA	False	NA	NA	NA	121721943	121721791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_121721800_121721900
m54284U_201001_173734/92342976/ccs	chr14	-	178	1	Intergenic	novelGene_7519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	67189122	67188944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_67188900_67189100
m54284U_201001_173734/92472066/ccs	chr5	+	294	1	Intergenic	novelGene_2853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCCATTTTTTCAAAACA	8085	False	NA	NA	False	NA	NA	NA	121514995	121515289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_121515000_121515300
m54284U_201001_173734/92473454/ccs	chr9	+	183	1	Intergenic	novelGene_4834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAATGCAAATA	NA	False	NA	NA	False	NA	NA	NA	59746062	59746245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59746100_59746200
m54284U_201001_173734/92538194/ccs	chr5	+	175	1	Intergenic	novelGene_2926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGAGTTCAT	NA	False	NA	NA	False	NA	NA	NA	126071834	126072009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_126071800_126072000
m54284U_201001_173734/92801626/ccs	chr15	+	2209	1	NIC	ENSMUSG00000023047.12	novel	1735	10	NA	NA	102	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCATCAATGTGTTTTT	NA	False	NA	16	True	AATAAA	-16	NA	102360859	102363068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102360900_102363100
m54284U_201001_173734/92997531/ccs	chr5	-	162	1	Intergenic	novelGene_3023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAAACCTTATAT	NA	False	NA	NA	False	NA	NA	NA	140453967	140453805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_140453800_140454000
m54284U_201001_173734/93062869/ccs	chr2	+	175	1	Intergenic	novelGene_1305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATGTTTTTTGGAA	NA	False	NA	NA	False	NA	NA	NA	177183730	177183905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_177183700_177183900
m54284U_201001_173734/9307961/ccs	chr18	-	201	1	Intergenic	novelGene_9038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	525	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATACAATTAACAATACCC	NA	False	NA	NA	False	NA	NA	NA	77811476	77811275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77811300_77811500
m54284U_201001_173734/93716642/ccs	chr1	+	169	1	Intergenic	novelGene_524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCAATAAATCTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	181662119	181662288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_181662100_181662300
m54284U_201001_173734/93718593/ccs	chr9	+	174	1	Intergenic	novelGene_5147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTTGGGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	119817830	119818004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_119817800_119818000
m54284U_201001_173734/9373717/ccs	chr10	+	171	1	Intergenic	novelGene_5326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAAAGAATGT	NA	False	NA	NA	False	NA	NA	NA	60969022	60969193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_60969000_60969200
m54284U_201001_173734/94045647/ccs	chr2	+	243	1	Intergenic	novelGene_751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCTTCCTTCCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34634168	34634411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34634200_34634400
m54284U_201001_173734/94437742/ccs	chr4	+	176	1	Intergenic	novelGene_1986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGAATATAAGATT	NA	False	NA	NA	False	NA	NA	NA	108054588	108054764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_108054600_108054800
m54284U_201001_173734/94702132/ccs	chr17	+	4230	27	NIC	ENSMUSG00000035842.11	novel	4141	27	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	5	junction_9	37.1936401002285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGATCAAGTATGAGA	NA	False	NA	28	True	ATTAAA	-23	NA	66430514	66459169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445085_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
m54284U_201001_173734/94765131/ccs	chr19	-	2464	1	NIC	ENSMUSG00000035885.6	novel	550	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCATGTCCTTCTGCAC	7366	False	NA	NA	False	AATAAA	-26	NA	7194981	7192517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7192500_7195000
m54284U_201001_173734/94897227/ccs	chr10	-	178	1	Intergenic	novelGene_5627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCAGAGAGAGCAGGCTT	3474	False	NA	NA	False	NA	NA	NA	128208331	128208153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128208200_128208300
m54284U_201001_173734/95683172/ccs	chr19	-	129	1	Intergenic	novelGene_9142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAATTGTCA	2580	False	NA	NA	False	NA	NA	NA	7238641	7238512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7238500_7238600
m54284U_201001_173734/95684469/ccs	chr11	+	193	1	Intergenic	novelGene_6322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGTTGGGGCTGCTA	NA	False	NA	NA	False	NA	NA	NA	100282464	100282657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_100282500_100282700
m54284U_201001_173734/96010248/ccs	chr6	+	179	1	Intergenic	novelGene_3189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTCTGTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	38192103	38192282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38192100_38192300
m54284U_201001_173734/96012501/ccs	chr7	+	265	1	Intergenic	novelGene_3815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTCAACCATAAAACTAT	NA	False	NA	NA	False	NA	NA	NA	42807878	42808143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_42807900_42808100
m54284U_201001_173734/96143134/ccs	chr5	+	193	1	Intergenic	novelGene_2797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCATTCCCTGTCCCC	NA	False	NA	NA	False	NA	NA	NA	115220967	115221160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115221000_115221200
m54284U_201001_173734/96667358/ccs	chr13	+	5320	1	Intergenic	novelGene_7311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	406	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATACATACACA	NA	False	NA	NA	False	NA	NA	NA	113855171	113860491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_113855200_113860500
m54284U_201001_173734/96798325/ccs	chr7	+	178	1	Intergenic	novelGene_4127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTTAAAAAAAACACAAA	NA	False	NA	3	True	NA	NA	NA	132143560	132143738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_132143600_132143700
m54284U_201001_173734/96799399/ccs	chr2	-	4635	4	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	291	2341	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	74.593714361347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATGGTCTTTCGTGTTTC	NA	False	NA	-1	True	NA	NA	NA	156681429	156672627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_156676959_156679742_156679834_156680337_156680457_156681335
m54284U_201001_173734/96928645/ccs	chr4	+	175	1	Intergenic	novelGene_1840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCAAGCAGCTGTTGGAA	NA	False	NA	NA	False	NA	NA	NA	44554748	44554923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_44554700_44554900
m54284U_201001_173734/96929439/ccs	chr19	-	175	1	Intergenic	novelGene_9260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAACCAAAAATTAA	NA	False	NA	NA	False	NA	NA	NA	41620868	41620693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_41620700_41620900
m54284U_201001_173734/97124445/ccs	chr18	+	179	1	Intergenic	novelGene_8973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	61211244	61211423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_61211200_61211400
m54284U_201001_173734/97192798/ccs	chr12	+	5386	1	Intergenic	novelGene_6675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1019	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCCATGCCTGGCAACT	NA	False	NA	NA	False	NA	NA	NA	68604999	68610385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_68605000_68610400
m54284U_201001_173734/97387066/ccs	chr15	+	5191	1	Intergenic	novelGene_7742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCACACGACTTATAAATT	NA	False	NA	NA	False	AAAACA	-34	NA	64125019	64130210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_64125000_64130200
m54284U_201001_173734/97650986/ccs	chr11	+	2237	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	159.2369378218	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268545	50277355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273775_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
m54284U_201001_173734/97714931/ccs	chr9	-	164	1	Intergenic	novelGene_4790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTACTCTCAGAGTTC	7512	False	NA	NA	False	NA	NA	NA	56844522	56844358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_56844400_56844500
m54284U_201001_173734/97781419/ccs	chr11	+	6934	1	Genic_Genomic	ENSMUSG00000020128.16	novel	NA	NA	NA	NA	-367	-46384	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTTAGAAAAGCATTAT	NA	False	NA	NA	False	NA	NA	NA	21188913	21195847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_21188900_21195800
m54284U_201001_173734/97911332/ccs	chr8	+	171	1	Intergenic	novelGene_4501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	111973683	111973854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111973700_111973900
m54284U_201001_173734/97913524/ccs	chr3	+	1680	1	Antisense	novelGene_ENSMUSG00000027770.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTTACCAGTTCCATTA	NA	False	NA	NA	False	NA	NA	NA	62385051	62386731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_62385100_62386700
m54284U_201001_173734/98041952/ccs	chr14	+	173	1	Intergenic	novelGene_7416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	46748108	46748281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_46748100_46748300
m54284U_201001_173734/98044341/ccs	chr6	-	3331	1	NIC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	2037	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATTTTTCCCCCTCTTG	NA	False	NA	-4	True	AATAAA	-29	NA	122708098	122704767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_122704800_122708100
m54284U_201001_173734/98500906/ccs	chr17	+	162	1	Intergenic	novelGene_8629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAATAAATAATATATA	NA	False	NA	NA	False	NA	NA	NA	47806644	47806806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47806600_47806800
m54284U_201001_173734/98699214/ccs	chr2	+	2630	1	Intergenic	novelGene_1226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCGGTCTGGTCTTTAT	8237	False	NA	NA	False	NA	NA	NA	165663572	165666202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_165663600_165666200
m54284U_201001_173734/98764614/ccs	chr9	+	197	1	Intergenic	novelGene_4987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGAGTCAGTATTTC	NA	False	NA	NA	False	NA	NA	NA	87526789	87526986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_87526800_87527000
m54284U_201001_173734/98828497/ccs	chr12	+	173	1	Intergenic	novelGene_6769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	False	NA	13	True	NA	NA	NA	81577598	81577771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_81577600_81577800
m54284U_201001_173734/98896430/ccs	chr13	+	154	1	Intergenic	novelGene_7117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAGAAACAAACAAA	2547	False	NA	NA	False	NA	NA	NA	56508450	56508604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_56508400_56508600
m54284U_201001_173734/98961223/ccs	chr7	+	1667	7	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	49.3693562175296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGCTGTCTAGT	NA	False	NA	26	True	AATAAA	-27	NA	127172754	127182479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127173139_127176706_127176883_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
m54284U_201001_173734/99092984/ccs	chr1	+	192	1	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATGATGCCAAAATTTG	NA	False	NA	NA	False	NA	NA	NA	34135477	34135669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_34135500_34135700
m54284U_201001_173734/99355162/ccs	chr5	-	173	1	Intergenic	novelGene_2905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGTGAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	124624897	124624724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124624700_124624900
m54284U_201001_173734/99420100/ccs	chr12	-	176	1	Intergenic	novelGene_6659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCATTCTTTTAGATAT	NA	False	NA	NA	False	NA	NA	NA	58983848	58983672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_58983700_58983800
m54284U_201001_173734/99486282/ccs	chr7	-	4599	1	Genic_Genomic	ENSMUSG00000030678.8	novel	NA	NA	NA	NA	-160	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	50	False	NA	-31	True	AATAAA	-14	NA	126625904	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_-_126621300_126625900
m54284U_201001_173734/99681743/ccs	chr9	+	205	1	Intergenic	novelGene_4751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGCACAGCTTCTACT	NA	False	NA	NA	False	NA	NA	NA	48220471	48220676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_48220500_48220700
m54284U_201001_173734/99813268/ccs	chr2	+	2018	5	NNC	ENSMUSG00000027424.12	novel	2840	5	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_4	200.600816299436	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112924	144122436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121406
m54284U_201001_173734/99877726/ccs	chr16	+	195	1	Intergenic	novelGene_8127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGCCCTACAGCTGGA	NA	False	NA	NA	False	NA	NA	NA	18659227	18659422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18659200_18659400
m54284U_201001_173734/99879103/ccs	chr5	+	192	1	Intergenic	novelGene_2899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGGGTTTCTCTGTATA	2165	False	NA	NA	False	NA	NA	NA	124555076	124555268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_124555100_124555300
m54284U_201013_031047/100008981/ccs	chr8	+	270	3	Intergenic	novelGene_4351	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	7	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTTAGGAACAAGTGAT	NA	False	NA	NA	False	ATTAAA	-13	NA	78792946	78800215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_78793056_78799076_78799137_78800114
m54284U_201013_031047/100140556/ccs	chr15	+	3082	1	Intergenic	novelGene_7783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCAGTTAACCAGGAGCA	2538	False	NA	NA	False	TTTAAA	-36	NA	76693786	76696868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76693800_76696900
m54284U_201013_031047/100534823/ccs	chr5	+	181	1	Intergenic	novelGene_2743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTTTAAATTGTTTT	NA	False	NA	1	True	NA	NA	NA	108199111	108199292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108199100_108199300
m54284U_201013_031047/100599173/ccs	chr7	-	180	1	Intergenic	novelGene_3840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAATGTAATGAAAG	2732	False	NA	NA	False	NA	NA	NA	45126056	45125876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_45125900_45126100
m54284U_201013_031047/100665433/ccs	chr5	+	160	1	Intergenic	novelGene_2828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAATAAA	6673	False	NA	NA	False	NA	NA	NA	118388325	118388485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_118388300_118388500
m54284U_201013_031047/100925905/ccs	chr14	+	180	1	Intergenic	novelGene_7347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAAAAATAAAT	4478	False	NA	NA	False	NA	NA	NA	20687232	20687412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_20687200_20687400
m54284U_201013_031047/10093568/ccs	chr1	+	162	1	Intergenic	novelGene_307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTTAAAAAACAAACAAG	NA	False	NA	NA	False	NA	NA	NA	131878123	131878285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_131878100_131878300
m54284U_201013_031047/101777715/ccs	chr10	+	2634	1	Intergenic	novelGene_5310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59428592	59431226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_59428600_59431200
m54284U_201013_031047/101911033/ccs	chr10	+	183	1	Intergenic	novelGene_5607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCCCATGAATAGTAT	1730	False	NA	NA	False	NA	NA	NA	127517513	127517696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_127517500_127517700
m54284U_201013_031047/102041373/ccs	chr5	+	177	1	Intergenic	novelGene_3069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	146601234	146601411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_146601200_146601400
m54284U_201013_031047/10225124/ccs	chr19	+	3202	1	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	0	-17579	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCAGCAGTGGTGGCGC	NA	False	NA	NA	False	NA	NA	NA	36811631	36814833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_36811600_36814800
m54284U_201013_031047/102498336/ccs	chr11	+	556	1	Intergenic	novelGene_5913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGACAGAGGCTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	65026784	65027340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_65026800_65027300
m54284U_201013_031047/102564720/ccs	chrX	+	931	7	NNC	ENSMUSG00000002014.13	novel	765	6	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	619.843730306276	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5374	False	NA	48	True	AATAAA	-30	NA	72830575	72834432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_72830913_72832443_72832560_72832685_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
m54284U_201013_031047/102631582/ccs	chr8	+	194	1	Intergenic	novelGene_4503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTCCAATAAATCCTG	NA	False	NA	NA	False	NA	NA	NA	111982240	111982434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111982200_111982400
m54284U_201013_031047/102697226/ccs	chr2	+	182	1	Intergenic	novelGene_1123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGGCCTTGTTGGAA	2215	False	NA	NA	False	NA	NA	NA	152245557	152245739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_152245600_152245700
m54284U_201013_031047/102761952/ccs	chr13	+	200	1	Intergenic	novelGene_7092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAGAGAGAGAGAAAGA	9118	False	NA	NA	False	NA	NA	NA	55345086	55345286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55345100_55345300
m54284U_201013_031047/102762229/ccs	chrX	-	176	1	Intergenic	novelGene_9719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAATGGAGC	NA	False	NA	NA	False	NA	NA	NA	161527188	161527012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161527000_161527200
m54284U_201013_031047/102891830/ccs	chr6	+	189	1	Intergenic	novelGene_3187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTTTTTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	38034695	38034884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38034700_38034900
m54284U_201013_031047/10291036/ccs	chr9	+	196	1	Intergenic	novelGene_5130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGTTGAAAAACACTGAG	NA	False	NA	NA	False	NA	NA	NA	114475050	114475246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_114475000_114475200
m54284U_201013_031047/102959068/ccs	chr8	+	177	1	Intergenic	novelGene_4547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAATCAACAAAA	8484	False	NA	NA	False	NA	NA	NA	120497544	120497721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_120497500_120497700
m54284U_201013_031047/103745063/ccs	chr4	+	244	1	Intergenic	novelGene_2230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTGAAAAAAGACTAGA	NA	False	NA	NA	False	AATGAA	-22	NA	133916416	133916660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133916400_133916700
m54284U_201013_031047/104139579/ccs	chr3	-	109	1	FSM	ENSMUSG00000119200.1	ENSMUST00000239967.1	107	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACGCTCCAAATGCAAGGG	NA	False	NA	NA	False	NA	NA	NA	139123624	139123515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_139123500_139123600
m54284U_201013_031047/10421677/ccs	chr14	+	226	1	Intergenic	novelGene_7474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGGTGGCTTCATCAGA	NA	False	NA	NA	False	NA	NA	NA	56074251	56074477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_56074300_56074500
m54284U_201013_031047/104399041/ccs	chr11	+	175	1	Intergenic	novelGene_5729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAAGTTGTTGCT	NA	False	NA	NA	False	NA	NA	NA	22790486	22790661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_22790500_22790700
m54284U_201013_031047/104465116/ccs	chr6	+	225	1	Intergenic	novelGene_3579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCACACACACACACACAC	NA	False	NA	NA	False	TTTAAA	-13	NA	147651809	147652034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_147651800_147652000
m54284U_201013_031047/104597993/ccs	chr1	-	193	1	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAGAATTGTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	37073873	37073680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_37073700_37073900
m54284U_201013_031047/104729248/ccs	chr2	-	159	1	Intergenic	novelGene_1293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATTATTTTT	9039	False	NA	NA	False	NA	NA	NA	173204878	173204719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_173204700_173204900
m54284U_201013_031047/104792308/ccs	chr6	+	179	1	Intergenic	novelGene_3119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATAGCTCCATTTACA	NA	False	NA	NA	False	NA	NA	NA	24911462	24911641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_24911500_24911600
m54284U_201013_031047/104925652/ccs	chr4	-	198	1	Intergenic	novelGene_2263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCCGCTGTCCCAGGGC	NA	False	NA	NA	False	NA	NA	NA	136512673	136512475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_136512500_136512700
m54284U_201013_031047/104925822/ccs	chr18	-	2051	14	NNC	ENSMUSG00000044201.11	novel	1945	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_13	67.0481589702639	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCTAGATGTCTCTA	2792	False	NA	-19	True	AATAAA	-18	NA	34884586	34866049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877129_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884013_34884166
m54284U_201013_031047/1050471/ccs	chr17	+	205	1	Intergenic	novelGene_8450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGTTTTTATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27450756	27450961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27450800_27451000
m54284U_201013_031047/105054891/ccs	chr4	+	177	1	Intergenic	novelGene_1871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATGAGCG	NA	False	NA	NA	False	NA	NA	NA	55200598	55200775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_55200600_55200800
m54284U_201013_031047/105120222/ccs	chr11	+	210	1	Intergenic	novelGene_5727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACCCAGAAAGCCCATA	NA	False	NA	NA	False	NA	NA	NA	22509914	22510124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_22509900_22510100
m54284U_201013_031047/105121380/ccs	chr2	+	187	1	Intergenic	novelGene_710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTCAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	31931802	31931989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_31931800_31932000
m54284U_201013_031047/105383990/ccs	chr11	+	172	1	Intergenic	novelGene_5875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGTTAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	59366933	59367105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59366900_59367100
m54284U_201013_031047/105384060/ccs	chr14	-	654	7	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	0	67	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	212.21091447478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGGGGAAATCATCTT	NA	False	NA	65	True	AGTAAA	-27	NA	47059641	47049063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47049281_47051700_47051775_47052361_47052444_47053055_47053106_47053634_47053685_47054842_47054940_47059557
m54284U_201013_031047/105578534/ccs	chrX	+	198	1	Intergenic	novelGene_9525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAAAGAGCCGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	90385409	90385607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_90385400_90385600
m54284U_201013_031047/105580942/ccs	chr4	+	163	1	Intergenic	novelGene_1729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATCTAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	3429205	3429368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_3429200_3429400
m54284U_201013_031047/105711366/ccs	chr7	-	182	1	Intergenic	novelGene_4081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	125915557	125915375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_125915400_125915600
m54284U_201013_031047/105908433/ccs	chr4	-	2894	1	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9106	False	NA	NA	False	AATAAA	-14	NA	155976212	155973318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155973300_155976200
m54284U_201013_031047/106103704/ccs	chr5	+	147	1	Intergenic	novelGene_2794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAACAAAAAAGGAAGAA	2211	False	NA	NA	False	NA	NA	NA	115055675	115055822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115055700_115055800
m54284U_201013_031047/106104188/ccs	chr5	-	155	1	Intergenic	novelGene_2469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATATAATAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20017088	20016933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_20016900_20017100
m54284U_201013_031047/10618677/ccs	chr11	-	166	1	Intergenic	novelGene_5935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAATAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	68902498	68902332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68902300_68902500
m54284U_201013_031047/106300851/ccs	chr5	+	210	1	Intergenic	novelGene_2885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	123585903	123586113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123585900_123586100
m54284U_201013_031047/106497805/ccs	chr4	-	165	1	Intergenic	novelGene_2276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGAGTGAGCAGGGCA	NA	False	NA	NA	False	NA	NA	NA	138087954	138087789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_138087800_138088000
m54284U_201013_031047/106629163/ccs	chrX	-	176	1	Intergenic	novelGene_9691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACAGCATCT	NA	False	NA	NA	False	NA	NA	NA	155253652	155253476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_155253500_155253700
m54284U_201013_031047/106760125/ccs	chr6	+	157	1	Intergenic	novelGene_3176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	35249913	35250070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_35249900_35250100
m54284U_201013_031047/106957076/ccs	chr14	+	173	1	Intergenic	novelGene_7432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTTAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	51028759	51028932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_51028800_51028900
m54284U_201013_031047/107151459/ccs	chr5	+	194	1	Intergenic	novelGene_2934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAGGAGGAAGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	128665147	128665341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_128665100_128665300
m54284U_201013_031047/107153548/ccs	chr18	-	646	1	Antisense	novelGene_ENSMUSG00000104225.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCAAGACAATCGACTC	NA	False	NA	NA	False	NA	NA	NA	37753041	37752395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_-_37752400_37753000
m54284U_201013_031047/107219742/ccs	chrX	+	178	1	Intergenic	novelGene_9609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGAAGTGCAGGA	NA	False	NA	NA	False	NA	NA	NA	107995269	107995447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_107995300_107995400
m54284U_201013_031047/107285034/ccs	chr5	+	173	1	Intergenic	novelGene_2630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAAAGAAAGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	77244296	77244469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_77244300_77244500
m54284U_201013_031047/107414457/ccs	chr18	+	173	1	Intergenic	novelGene_9021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGACTTTCAAGT	NA	False	NA	NA	False	NA	NA	NA	75468331	75468504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_75468300_75468500
m54284U_201013_031047/10750667/ccs	chr15	+	156	1	Intergenic	novelGene_7966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	99557218	99557374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99557200_99557400
m54284U_201013_031047/107743519/ccs	chr15	-	171	1	Intergenic	novelGene_7995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACAATTATTATTTTGT	3090	False	NA	NA	False	NA	NA	NA	100616942	100616771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100616800_100616900
m54284U_201013_031047/108135690/ccs	chr8	+	201	1	Intergenic	novelGene_4227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTTATGGGCGGGAAA	4477	False	NA	NA	False	NA	NA	NA	23100109	23100310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_23100100_23100300
m54284U_201013_031047/10814430/ccs	chr5	-	190	1	Intergenic	novelGene_2929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATTGCCTTTGCCACAA	NA	False	NA	NA	False	NA	NA	NA	127732080	127731890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_127731900_127732100
m54284U_201013_031047/108200834/ccs	chr4	-	449	4	NNC	ENSMUSG00000050608.12	novel	2549	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	1247.70331231249	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCAAGCAATGCCTTT	5298	False	NA	-20	True	AATAAA	-16	NA	138858305	138831101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_138831324_138832300_138832407_138833166_138833215_138858232
m54284U_201013_031047/108267651/ccs	chr9	+	180	1	Intergenic	novelGene_4747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTTTTTTGGTAA	NA	False	NA	NA	False	NA	NA	NA	46069451	46069631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_46069500_46069600
m54284U_201013_031047/108594135/ccs	chr1	+	183	1	Intergenic	novelGene_342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCGTATGCAAGAGGATT	NA	False	NA	NA	False	NA	NA	NA	135631042	135631225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_135631000_135631200
m54284U_201013_031047/108658931/ccs	chr12	+	181	1	Intergenic	novelGene_6946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCTTATTATTTTACA	NA	False	NA	NA	False	NA	NA	NA	118839911	118840092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_118839900_118840100
m54284U_201013_031047/108792415/ccs	chr1	-	189	1	Intergenic	novelGene_304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCAGTGGCCGCTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	131799269	131799080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_131799100_131799300
m54284U_201013_031047/10881264/ccs	chr4	+	185	1	Intergenic	novelGene_2380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATATTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	149260205	149260390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149260200_149260400
m54284U_201013_031047/109316051/ccs	chr11	+	159	1	Intergenic	novelGene_5668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7713	False	NA	NA	False	NA	NA	NA	4645474	4645633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4645500_4645600
m54284U_201013_031047/109380109/ccs	chr2	-	175	1	Intergenic	novelGene_631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGACAGAATATTT	9352	False	NA	NA	False	NA	NA	NA	24925829	24925654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_24925700_24925800
m54284U_201013_031047/109445974/ccs	chr3	+	182	1	Intergenic	novelGene_1531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAGTGTCTATAATTGTT	NA	False	NA	NA	False	NA	NA	NA	89888397	89888579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89888400_89888600
m54284U_201013_031047/10944653/ccs	chr4	+	176	1	Intergenic	novelGene_2048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGGAGAG	NA	False	NA	NA	False	NA	NA	NA	117899198	117899374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_117899200_117899400
m54284U_201013_031047/109576272/ccs	chr8	+	159	1	Intergenic	novelGene_4404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	91575075	91575234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_91575100_91575200
m54284U_201013_031047/109838415/ccs	chr7	+	176	1	Intergenic	novelGene_3868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAACCAAAACA	NA	False	NA	NA	False	NA	NA	NA	54075093	54075269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_54075100_54075300
m54284U_201013_031047/11010122/ccs	chr4	+	176	1	Intergenic	novelGene_1911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAACTATGTCAAA	NA	False	NA	NA	False	NA	NA	NA	82813953	82814129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_82814000_82814100
m54284U_201013_031047/110101856/ccs	chr11	-	187	1	Intergenic	novelGene_5689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTGTTTACTTACTT	NA	False	NA	NA	False	NA	NA	NA	6330810	6330623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_6330600_6330800
m54284U_201013_031047/11012027/ccs	chr4	+	191	1	Intergenic	novelGene_2421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	155314458	155314649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_155314500_155314600
m54284U_201013_031047/110168202/ccs	chr2	+	190	1	Intergenic	novelGene_1001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCTGGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	119023169	119023359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119023200_119023400
m54284U_201013_031047/110430737/ccs	chr1	+	171	1	Intergenic	novelGene_492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	177465458	177465629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_177465500_177465600
m54284U_201013_031047/110493813/ccs	chr17	-	2790	1	ISM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	18620	6314	3500	1611	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAGGAGTCATGAGGC	NA	False	NA	-9	True	NA	NA	NA	30813013	30810223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_30810200_30813000
m54284U_201013_031047/110758260/ccs	chr5	+	208	1	Intergenic	novelGene_2632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAACAATGAGATGGCTT	NA	False	NA	NA	False	NA	NA	NA	77372714	77372922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_77372700_77372900
m54284U_201013_031047/11076934/ccs	chr9	-	191	1	Intergenic	novelGene_4936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAATAATTTTA	NA	False	NA	NA	False	NA	NA	NA	72680628	72680437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72680400_72680600
m54284U_201013_031047/11077187/ccs	chrX	+	229	1	Intergenic	novelGene_9586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102656900	102657129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_102656900_102657100
m54284U_201013_031047/110889176/ccs	chr19	+	166	1	Intergenic	novelGene_9229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATCTCAAGAGCCTT	NA	False	NA	NA	False	NA	NA	NA	35852459	35852625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_35852500_35852600
m54284U_201013_031047/111085810/ccs	chr14	-	178	1	Intergenic	novelGene_7552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGAGTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	77775972	77775794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_77775800_77776000
m54284U_201013_031047/111149581/ccs	chr11	+	182	1	Intergenic	novelGene_5983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	529	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGCTCCAGTGTTAG	7435	False	NA	NA	False	NA	NA	NA	73017245	73017427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_73017200_73017400
m54284U_201013_031047/111281432/ccs	chr2	+	2557	1	Intergenic	novelGene_734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTGTGCACCACCAT	NA	False	NA	NA	False	NA	NA	NA	33346362	33348919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33346400_33348900
m54284U_201013_031047/111282187/ccs	chr3	+	180	1	Intergenic	novelGene_1404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGCAATATTTTTTAAA	NA	False	NA	3	True	NA	NA	NA	51482741	51482921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_51482700_51482900
m54284U_201013_031047/1114612/ccs	chr4	+	2625	12	NNC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	-78	at_least_one_novel_splicesite	TRUE	canonical	3	51	junction_11	22.9861618449805	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAACAAAAATAAAA	NA	False	NA	-14	True	AGTAAA	-34	NA	129355464	129382213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833_129381339_129381367
m54284U_201013_031047/1114818/ccs	chr4	-	177	1	Intergenic	novelGene_1879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAACAACAACAAC	3481	False	NA	NA	False	NA	NA	NA	58455454	58455277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_58455300_58455500
m54284U_201013_031047/111739300/ccs	chr8	-	2591	1	NIC	ENSMUSG00000002393.15	novel	1372	4	NA	NA	-923	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGCCTCTGCTTTCTTC	NA	False	NA	-4	True	AATAAA	-16	NA	71829357	71826766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71826800_71829400
m54284U_201013_031047/111870992/ccs	chr4	+	5564	1	Intergenic	novelGene_2226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAAGCAAGCTACATA	NA	False	NA	NA	False	NA	NA	NA	133683970	133689534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133684000_133689500
m54284U_201013_031047/112198100/ccs	chr14	+	134	1	Intergenic	novelGene_7358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	24537292	24537426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_24537300_24537400
m54284U_201013_031047/112329847/ccs	chr3	+	201	1	Intergenic	novelGene_1522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGCGTTGCTATATAT	965	False	NA	NA	False	NA	NA	NA	89390296	89390497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89390300_89390500
m54284U_201013_031047/112525668/ccs	chr9	+	184	1	Intergenic	novelGene_5100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATTATTTAAGATGTAT	NA	False	NA	NA	False	NA	NA	NA	109797131	109797315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_109797100_109797300
m54284U_201013_031047/112591521/ccs	chr6	+	209	1	Intergenic	novelGene_3175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCACTGAAGATTTTCT	3478	False	NA	NA	False	NA	NA	NA	35208916	35209125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_35208900_35209100
m54284U_201013_031047/112723468/ccs	chr8	+	195	1	Intergenic	novelGene_4307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTACAACTTTTTAGAA	NA	False	NA	NA	False	NA	NA	NA	65511973	65512168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_65512000_65512200
m54284U_201013_031047/112724070/ccs	chr5	+	207	1	Intergenic	novelGene_2742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTTAAAAAAAATAAATAC	NA	False	NA	NA	False	NA	NA	NA	108195639	108195846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108195600_108195800
m54284U_201013_031047/112855403/ccs	chr8	-	208	1	Intergenic	novelGene_4597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGACTGAGCATGCACC	NA	False	NA	-1	True	AATAAA	-7	NA	124791474	124791266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124791300_124791500
m54284U_201013_031047/112984426/ccs	chr9	+	178	1	Intergenic	novelGene_5003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACCTTGTCTCAAGTTA	4202	False	NA	NA	False	NA	NA	NA	95515480	95515658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_95515500_95515700
m54284U_201013_031047/113182342/ccs	chr18	+	185	1	Intergenic	novelGene_8925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAAAGGATAACT	NA	False	NA	NA	False	NA	NA	NA	38516685	38516870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_38516700_38516900
m54284U_201013_031047/113247955/ccs	chr4	+	186	1	Intergenic	novelGene_1836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATACATTAAAAAAA	NA	False	NA	6	True	NA	NA	NA	44223152	44223338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_44223200_44223300
m54284U_201013_031047/113313652/ccs	chr19	+	185	1	Intergenic	novelGene_9334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAATATCA	3606	False	NA	NA	False	NA	NA	NA	53088711	53088896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_53088700_53088900
m54284U_201013_031047/113576371/ccs	chr14	+	194	1	Intergenic	novelGene_7478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	56777539	56777733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_56777500_56777700
m54284U_201013_031047/113706293/ccs	chr7	+	175	1	Intergenic	novelGene_3724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAGA	4403	False	NA	NA	False	NA	NA	NA	27137983	27138158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_27138000_27138200
m54284U_201013_031047/113837211/ccs	chr13	+	189	1	Intergenic	novelGene_6994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTTTTTAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	22974284	22974473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_22974300_22974500
m54284U_201013_031047/114164458/ccs	chr13	+	2785	1	Intergenic	novelGene_7209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGATTCTCCACAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	74558299	74561084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_74558300_74561100
m54284U_201013_031047/114688552/ccs	chr2	-	183	1	Intergenic	novelGene_1118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTACCTTAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	152073553	152073370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_152073400_152073600
m54284U_201013_031047/114819552/ccs	chr3	+	206	1	Intergenic	novelGene_1576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTGTAATCAAATCACTA	NA	False	NA	NA	False	NA	NA	NA	95832228	95832434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95832200_95832400
m54284U_201013_031047/114952533/ccs	chr13	+	2539	1	NIC	ENSMUSG00000021537.10	novel	1226	5	NA	NA	2518	117	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAATGTTTGGTAAATT	NA	False	NA	7	True	AATAAA	-18	NA	81942613	81945152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_81942600_81945200
m54284U_201013_031047/115016463/ccs	chr4	+	187	1	Intergenic	novelGene_1837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	44246740	44246927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_44246700_44246900
m54284U_201013_031047/115081655/ccs	chr11	+	207	1	Intergenic	novelGene_6036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCACAATGCTAGACAG	NA	False	NA	NA	False	NA	NA	NA	76575409	76575616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76575400_76575600
m54284U_201013_031047/115083372/ccs	chr11	-	176	1	Intergenic	novelGene_5943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGTTAAGGAAA	9036	False	NA	NA	False	NA	NA	NA	69359035	69358859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_69358900_69359000
m54284U_201013_031047/115084007/ccs	chr11	+	2521	1	Antisense	novelGene_ENSMUSG00000020717.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTCTGTCTCCCATG	NA	False	NA	NA	False	NA	NA	NA	106570898	106573419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_106570900_106573400
m54284U_201013_031047/115148187/ccs	chr2	+	192	1	Intergenic	novelGene_907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAACAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	87371779	87371971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_87371800_87372000
m54284U_201013_031047/115213252/ccs	chr12	+	173	1	Intergenic	novelGene_6859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAACTCATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102698411	102698584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_102698400_102698600
m54284U_201013_031047/115279372/ccs	chr10	-	2556	1	Genic_Genomic	ENSMUSG00000097076.2	novel	NA	NA	NA	NA	4442	1076	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCGTTTTTGACTGTGT	NA	False	NA	0	True	AATAAA	-21	NA	84384760	84382204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_-_84382200_84384800
m54284U_201013_031047/115279924/ccs	chr6	-	4833	27	NNC	ENSMUSG00000053470.14	novel	4753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_4	125.828426436192	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71609974	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568976_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
m54284U_201013_031047/115344482/ccs	chr19	-	214	1	Intergenic	novelGene_9166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTCCTTATCTCTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	12689384	12689170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_12689200_12689400
m54284U_201013_031047/115474912/ccs	chr13	+	168	1	Intergenic	novelGene_7112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAACAAGGGCTTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	55859414	55859582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55859400_55859600
m54284U_201013_031047/115803512/ccs	chrX	+	219	1	Intergenic	novelGene_9661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGGGGGAGATGCACAT	NA	False	NA	NA	False	TTTAAA	-7	NA	149673554	149673773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_149673600_149673800
m54284U_201013_031047/115804723/ccs	chr4	+	186	1	Intergenic	novelGene_2025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCCGGGCAGTGGTGGG	1235	False	NA	NA	False	NA	NA	NA	116561384	116561570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116561400_116561600
m54284U_201013_031047/115934554/ccs	chr10	+	199	1	Intergenic	novelGene_5180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGATAACCATAATTTGGA	NA	False	NA	NA	False	NA	NA	NA	5766383	5766582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_5766400_5766600
m54284U_201013_031047/11602273/ccs	chr1	+	186	1	Intergenic	novelGene_337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGGAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	135213242	135213428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_135213200_135213400
m54284U_201013_031047/116064548/ccs	chr19	+	199	1	Intergenic	novelGene_9193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGGCCAGTGAAGTGGC	4975	False	NA	NA	False	NA	NA	NA	25102858	25103057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_25102900_25103100
m54284U_201013_031047/116196890/ccs	chr9	+	4818	1	Antisense	novelGene_ENSMUSG00000031988.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTTGGCTGCCCTAT	NA	False	NA	NA	False	NA	NA	NA	26924219	26929037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_26924200_26929000
m54284U_201013_031047/116263254/ccs	chr4	+	169	1	Intergenic	novelGene_2157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8226	False	NA	NA	False	NA	NA	NA	129499522	129499691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129499500_129499700
m54284U_201013_031047/116457900/ccs	chr11	+	2027	1	FSM	ENSMUSG00000048878.7	ENSMUST00000053063.7	3495	1	117	1351	117	-1351	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAGTTTCAGTGTGATTT	NA	False	NA	7	True	AATAAA	-18	NA	103007173	103009200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_103007200_103009200
m54284U_201013_031047/116524540/ccs	chr14	-	158	1	Intergenic	novelGene_7590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	2059	False	NA	NA	False	NA	NA	NA	106099125	106098967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_106099000_106099100
m54284U_201013_031047/116590275/ccs	chr12	+	3149	1	Intergenic	novelGene_6592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23834508	23837657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_23834500_23837700
m54284U_201013_031047/116656561/ccs	chr7	+	202	1	Intergenic	novelGene_4126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGTAAAATTTAAAAATA	NA	False	NA	NA	False	AATAAA	-15	NA	132088746	132088948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_132088700_132088900
m54284U_201013_031047/117311834/ccs	chr4	+	3520	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	358.631410141655	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	570	False	NA	8	True	AATAAA	-20	NA	137321517	137383642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348374_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201013_031047/117705101/ccs	chr9	+	170	1	FSM	ENSMUSG00000102411.2	ENSMUST00000194508.2	2749	1	1408	1171	1408	-1171	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	72636829	72636999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72636800_72637000
m54284U_201013_031047/117834283/ccs	chr11	+	173	1	Intergenic	novelGene_5991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	540	False	NA	NA	False	NA	NA	NA	74620235	74620408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74620200_74620400
m54284U_201013_031047/117965370/ccs	chr2	+	232	1	Intergenic	novelGene_887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAAAGAAAATTAATATCT	NA	False	NA	NA	False	NA	NA	NA	80482353	80482585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_80482400_80482600
m54284U_201013_031047/118098310/ccs	chr8	+	180	1	Intergenic	novelGene_4454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCACAGCTTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	106792888	106793068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106792900_106793100
m54284U_201013_031047/118162757/ccs	chr4	+	188	1	Intergenic	novelGene_1815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCAGATGTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	41163325	41163513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_41163300_41163500
m54284U_201013_031047/118293251/ccs	chr11	+	204	1	Intergenic	novelGene_6329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAATAAAGAGACAAA	2770	False	NA	NA	False	NA	NA	NA	101047851	101048055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101047900_101048100
m54284U_201013_031047/118424083/ccs	chr5	+	243	1	Intergenic	novelGene_2696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGAACCTGACATTTG	NA	False	NA	NA	False	NA	NA	NA	100733390	100733633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_100733400_100733600
m54284U_201013_031047/11862907/ccs	chr9	+	188	1	Intergenic	novelGene_4662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTTATTTTATGTAT	NA	False	NA	NA	False	NA	NA	NA	21364988	21365176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_21365000_21365200
m54284U_201013_031047/118753890/ccs	chr4	+	182	1	Intergenic	novelGene_2190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAGCCTTGTTTAGTTGT	NA	False	NA	NA	False	NA	NA	NA	132113755	132113937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132113800_132113900
m54284U_201013_031047/118948408/ccs	chr18	-	178	1	Intergenic	novelGene_9032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAAGTGTA	NA	False	NA	NA	False	NA	NA	NA	77700016	77699838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77699800_77700000
m54284U_201013_031047/119146207/ccs	chrX	+	383	1	Intergenic	novelGene_9576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTAGGAGACATAACTC	2393	False	NA	NA	False	NA	NA	NA	101269287	101269670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_101269300_101269700
m54284U_201013_031047/119277818/ccs	chr15	-	159	1	Intergenic	novelGene_7950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAGAAAGAA	7891	False	NA	NA	False	NA	NA	NA	98884299	98884140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98884100_98884300
m54284U_201013_031047/119472823/ccs	chrX	+	184	1	Intergenic	novelGene_9509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGGTCAAAAGA	NA	False	NA	NA	False	NA	NA	NA	74100551	74100735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_74100600_74100700
m54284U_201013_031047/119734525/ccs	chr3	+	4100	1	FSM	ENSMUSG00000048106.7	ENSMUST00000198527.3	6148	1	0	2048	0	-2048	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGGTCTATCGTGAGT	NA	False	NA	NA	False	NA	NA	NA	19949049	19953149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_19949000_19953100
m54284U_201013_031047/119800590/ccs	chr13	+	174	1	Intergenic	novelGene_7273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAAGGCTTGTG	6570	False	NA	NA	False	NA	NA	NA	98698883	98699057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_98698900_98699100
m54284U_201013_031047/120063986/ccs	chr14	+	183	1	Intergenic	novelGene_7456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATCACTACTGGG	1264	False	NA	NA	False	NA	NA	NA	54626750	54626933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54626800_54626900
m54284U_201013_031047/120522063/ccs	chrX	-	159	1	Intergenic	novelGene_9644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAACAATAA	NA	False	NA	NA	False	NA	NA	NA	139256676	139256517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_139256500_139256700
m54284U_201013_031047/120652094/ccs	chr17	+	170	1	Intergenic	novelGene_8720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATAGATTATTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	74593654	74593824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_74593700_74593800
m54284U_201013_031047/120653755/ccs	chr10	-	200	1	Intergenic	novelGene_5510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGATGAGTCCTCTATTG	NA	False	NA	NA	False	NA	NA	NA	95056393	95056193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_95056200_95056400
m54284U_201013_031047/120785649/ccs	chr11	-	184	1	Intergenic	novelGene_6428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAACACTCAAATGCAT	9062	False	NA	NA	False	NA	NA	NA	107565460	107565276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107565300_107565500
m54284U_201013_031047/121045688/ccs	chr9	+	156	1	Intergenic	novelGene_5124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAACTGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	114212660	114212816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_114212700_114212800
m54284U_201013_031047/121177061/ccs	chr3	+	168	1	Intergenic	novelGene_1399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTTCTCTTCCAGGAA	NA	False	NA	NA	False	NA	NA	NA	51333219	51333387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_51333200_51333400
m54284U_201013_031047/121178934/ccs	chr13	-	1761	13	NNC	ENSMUSG00000021715.13	novel	2071	14	NA	NA	-197	-194	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_1	231.118100521982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTTAACCATTTGCAGA	NA	False	NA	-14	True	AATAAA	-20	NA	104953847	104767841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_104768247_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194_104953331_104953618
m54284U_201013_031047/121374075/ccs	chr2	-	175	1	Intergenic	novelGene_1075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCGGAGCAAGCAGAGAC	9683	False	NA	NA	False	NA	NA	NA	131074175	131074000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_131074000_131074200
m54284U_201013_031047/121506592/ccs	chr19	-	5164	1	NIC	ENSMUSG00000037916.15	novel	1619	10	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTCTGGAACTTTGC	6567	False	NA	-2	True	AATAAA	-25	NA	4062665	4057501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4057500_4062700
m54284U_201013_031047/121571587/ccs	chr2	+	205	1	Antisense	novelGene_ENSMUSG00000025839.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTATTTAAAAAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	87319239	87319444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_87319200_87319400
m54284U_201013_031047/122028193/ccs	chr7	+	178	1	Intergenic	novelGene_3870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGTACAAGAAATATT	NA	False	NA	NA	False	NA	NA	NA	56544313	56544491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_56544300_56544500
m54284U_201013_031047/122227319/ccs	chr14	-	172	1	Intergenic	novelGene_7414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAGACACTTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	45985882	45985710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_45985700_45985900
m54284U_201013_031047/122423614/ccs	chr7	-	182	1	Intergenic	novelGene_3675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTGCCACCACGCCCA	NA	False	NA	NA	False	NA	NA	NA	16661230	16661048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_16661000_16661200
m54284U_201013_031047/12255674/ccs	chr2	+	158	1	Intergenic	novelGene_1010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATCTCTAAAAAAAAAAAA	9908	False	NA	NA	False	NA	NA	NA	119684986	119685144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119685000_119685100
m54284U_201013_031047/12257276/ccs	chr2	+	167	1	Intergenic	novelGene_1166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAGACATG	NA	False	NA	NA	False	NA	NA	NA	155769155	155769322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155769200_155769300
m54284U_201013_031047/122618167/ccs	chr4	-	177	1	Intergenic	novelGene_2247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGAGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	135360506	135360329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135360300_135360500
m54284U_201013_031047/122619454/ccs	chr10	+	186	1	Intergenic	novelGene_5498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGACTATAAGTGTTTC	8032	False	NA	NA	False	NA	NA	NA	90926195	90926381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_90926200_90926400
m54284U_201013_031047/122750979/ccs	chr11	+	190	1	Intergenic	novelGene_6270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGATGCCCATGAGCA	NA	False	NA	NA	False	NA	NA	NA	97209529	97209719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97209500_97209700
m54284U_201013_031047/122946513/ccs	chr4	-	199	1	Intergenic	novelGene_1932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACCTTCTTGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	88062830	88062631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_88062600_88062800
m54284U_201013_031047/123144746/ccs	chr1	+	3821	1	NIC	ENSMUSG00000026436.16	novel	2107	4	NA	NA	10349	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAGTGATTATTTC	NA	False	NA	NA	False	AATAAA	-15	NA	131956529	131960350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_131956500_131960400
m54284U_201013_031047/123470530/ccs	chr13	+	193	1	Intergenic	novelGene_7132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTTATGTTTATG	NA	False	NA	NA	False	NA	NA	NA	59722518	59722711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_59722500_59722700
m54284U_201013_031047/123601100/ccs	chr14	+	174	1	Intergenic	novelGene_7534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	70427590	70427764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_70427600_70427800
m54284U_201013_031047/123734391/ccs	chr2	+	3940	1	Antisense	novelGene_ENSMUSG00000034075.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTGATCTT	NA	False	NA	NA	False	NA	NA	NA	84538458	84542398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_84538500_84542400
m54284U_201013_031047/123799255/ccs	chr2	-	175	1	Intergenic	novelGene_874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGGAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	75643879	75643704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_75643700_75643900
m54284U_201013_031047/12388563/ccs	chr16	+	1716	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	-75	-672	-75	672	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACCAACTAGCTAATAAA	NA	False	NA	NA	False	AATAAA	-40	NA	24348068	24349784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_24348100_24349800
m54284U_201013_031047/12389064/ccs	chr9	+	345	1	Antisense	novelGene_ENSMUSG00000032480.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAGGTATTTGCT	2230	False	NA	NA	False	NA	NA	NA	109939460	109939805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_109939500_109939800
m54284U_201013_031047/124258485/ccs	chr2	+	198	1	Intergenic	novelGene_666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAAATGTACGCAAAAGT	NA	False	NA	NA	False	NA	NA	NA	29332034	29332232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_29332000_29332200
m54284U_201013_031047/124388436/ccs	chr8	+	179	1	Intergenic	novelGene_4203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	12725277	12725456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_12725300_12725500
m54284U_201013_031047/124389727/ccs	chr11	-	211	1	Intergenic	novelGene_5895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAAGGAGGAGGGGAT	463	False	NA	NA	False	NA	NA	NA	61205735	61205524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_61205500_61205700
m54284U_201013_031047/124389878/ccs	chr12	-	195	1	Intergenic	novelGene_6535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTGTTTCTCTCCTTCCT	74	False	NA	NA	False	NA	NA	NA	3646321	3646126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_3646100_3646300
m54284U_201013_031047/124650686/ccs	chr19	+	191	1	Intergenic	novelGene_9289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAACCCTATAAATGACAT	8265	False	NA	NA	False	AAGAAA	-3	NA	45243872	45244063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45243900_45244100
m54284U_201013_031047/124782786/ccs	chr5	-	174	1	Intergenic	novelGene_3073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	146860190	146860016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_146860000_146860200
m54284U_201013_031047/124848620/ccs	chr5	-	171	1	Intergenic	novelGene_2933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGATAGAGGG	NA	False	NA	NA	False	NA	NA	NA	128418153	128417982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_128418000_128418200
m54284U_201013_031047/124913454/ccs	chr4	+	159	1	Intergenic	novelGene_2016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	116266511	116266670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116266500_116266700
m54284U_201013_031047/125044942/ccs	chr12	+	179	1	Intergenic	novelGene_6651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGTACTATT	NA	False	NA	NA	False	NA	NA	NA	55111450	55111629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_55111400_55111600
m54284U_201013_031047/125109806/ccs	chr19	+	1327	1	Intergenic	novelGene_9183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCCTACCCTGCAACATAA	NA	False	NA	NA	False	NA	NA	NA	23018391	23019718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_23018400_23019700
m54284U_201013_031047/125110217/ccs	chr10	+	182	1	Intergenic	novelGene_5334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAACAGCCAGGCATGGT	NA	False	NA	NA	False	NA	NA	NA	61281837	61282019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61281800_61282000
m54284U_201013_031047/125241710/ccs	chr11	+	152	1	Intergenic	novelGene_6455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGTTTCTAGGAATGC	NA	False	NA	NA	False	NA	NA	NA	115439348	115439500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115439300_115439500
m54284U_201013_031047/125304929/ccs	chr5	+	204	1	FSM	ENSMUSG00000036435.14	ENSMUST00000202151.2	2990	1	459	2327	459	-2327	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGAAGCTAAGATTCT	NA	False	NA	NA	False	NA	NA	NA	76700951	76701155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_76701000_76701200
m54284U_201013_031047/125305768/ccs	chr10	+	180	1	Intergenic	novelGene_5633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGACATATGGGGGAA	3793	False	NA	NA	False	NA	NA	NA	128442948	128443128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128442900_128443100
m54284U_201013_031047/125370656/ccs	chr5	+	181	1	Intergenic	novelGene_2863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACACTGACACACCTAT	1657	False	NA	NA	False	NA	NA	NA	122208467	122208648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_122208500_122208600
m54284U_201013_031047/125700807/ccs	chr13	+	164	1	FSM	ENSMUSG00000021728.9	ENSMUST00000224455.2	2136	1	177	1795	177	-1751	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	117364738	117364902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_117364700_117364900
m54284U_201013_031047/126157132/ccs	chr5	+	187	1	Intergenic	novelGene_2962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGCGTGCGTGCC	NA	False	NA	NA	False	NA	NA	NA	134371892	134372079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_134371900_134372100
m54284U_201013_031047/126222835/ccs	chr2	+	192	1	Intergenic	novelGene_642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGCCAAGATGCTCCAA	NA	False	NA	NA	False	NA	NA	NA	25959888	25960080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_25959900_25960100
m54284U_201013_031047/126290367/ccs	chr6	+	175	1	Intergenic	novelGene_3325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTATTTATTTTA	267	False	NA	NA	False	NA	NA	NA	72390276	72390451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_72390300_72390500
m54284U_201013_031047/126355440/ccs	chr8	+	210	1	Intergenic	novelGene_4381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGCAGAGAGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	85839211	85839421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_85839200_85839400
m54284U_201013_031047/126550637/ccs	chr2	-	159	1	Intergenic	novelGene_1258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGGAGCTAACCGGAGT	7533	False	NA	NA	False	NA	NA	NA	168003174	168003015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168003000_168003200
m54284U_201013_031047/127731286/ccs	chr6	+	200	1	Intergenic	novelGene_3326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTAGGCTGGAGATAG	NA	False	NA	NA	False	NA	NA	NA	72589730	72589930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_72589700_72589900
m54284U_201013_031047/127861062/ccs	chr19	+	199	1	Intergenic	novelGene_9088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACAACAACAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	4572734	4572933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4572700_4572900
m54284U_201013_031047/128059526/ccs	chr5	+	164	1	Intergenic	novelGene_2840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGATAAAAAGGC	2486	False	NA	NA	False	NA	NA	NA	120651827	120651991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_120651800_120652000
m54284U_201013_031047/128319712/ccs	chr6	+	181	1	Intergenic	novelGene_3307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAAGGAACTGAGATCA	NA	False	NA	NA	False	NA	NA	NA	67183908	67184089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_67183900_67184100
m54284U_201013_031047/128321292/ccs	chr2	+	178	1	Intergenic	novelGene_1084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	135275062	135275240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_135275100_135275200
m54284U_201013_031047/128779619/ccs	chr2	+	189	1	Intergenic	novelGene_805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGCAGCAAGCATT	NA	False	NA	NA	False	NA	NA	NA	59571192	59571381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_59571200_59571400
m54284U_201013_031047/129108549/ccs	chr15	+	198	1	Intergenic	novelGene_7793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGCATGGTCCAGGAATA	NA	False	NA	NA	False	TTTAAA	-9	NA	77236523	77236721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_77236500_77236700
m54284U_201013_031047/129108692/ccs	chrX	-	186	1	Intergenic	novelGene_9665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAATAAAACCTACT	NA	False	NA	NA	False	NA	NA	NA	149956229	149956043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_149956000_149956200
m54284U_201013_031047/129370689/ccs	chr6	-	1792	6	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	28.667751917442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	-18	True	ATTAAA	-17	NA	134874888	134846119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_134847446_134854179_134854298_134863853_134863900_134864592_134864749_134874124_134874177_134874794
m54284U_201013_031047/129566515/ccs	chr3	-	1013	1	FSM	ENSMUSG00000099370.2	ENSMUST00000191479.2	818	1	204	-399	204	5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGGTCATGGTGTTTCT	1171	False	NA	0	True	NA	NA	NA	75555760	75554747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_75554700_75555800
m54284U_201013_031047/129567163/ccs	chr11	-	185	1	Intergenic	novelGene_6053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCCATTTACTACAATGT	NA	False	NA	NA	False	NA	NA	NA	77666017	77665832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_77665800_77666000
m54284U_201013_031047/129633119/ccs	chr16	-	189	1	Intergenic	novelGene_8031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCTGTCTGCTTGCCGG	NA	False	NA	NA	False	NA	NA	NA	4402991	4402802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_4402800_4403000
m54284U_201013_031047/129957912/ccs	chr6	+	169	1	Intergenic	novelGene_3483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	5701	False	NA	NA	False	NA	NA	NA	122660306	122660475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_122660300_122660500
m54284U_201013_031047/130091822/ccs	chr14	+	183	1	Intergenic	novelGene_7454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATAAAGTTACCAT	NA	False	NA	NA	False	NA	NA	NA	54529197	54529380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54529200_54529400
m54284U_201013_031047/130157270/ccs	chr7	+	3760	1	Genic_Genomic	ENSMUSG00000031016.10	novel	NA	NA	NA	NA	20174	2693	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTATATTTATTTATT	NA	False	NA	NA	False	TTTAAA	-4	NA	109741426	109745186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_109741400_109745200
m54284U_201013_031047/130351376/ccs	chr17	-	2804	4	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	0	319	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	800.526077026851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGTGTGTATTTTGTG	4817	False	NA	-3	True	ATTAAA	-16	NA	25179619	25161124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25163653_25164553_25164603_25174991_25175141_25179541
m54284U_201013_031047/13042680/ccs	chr3	+	188	1	Intergenic	novelGene_1649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACAAAAGACAGTAAGGTA	NA	False	NA	NA	False	NA	NA	NA	119673628	119673816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_119673600_119673800
m54284U_201013_031047/13043580/ccs	chr4	-	173	1	Intergenic	novelGene_1927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATATGT	1900	False	NA	NA	False	NA	NA	NA	86747503	86747330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_86747300_86747500
m54284U_201013_031047/130483510/ccs	chr1	-	187	1	Intergenic	novelGene_353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGGATTTCTTTTATT	NA	False	NA	NA	False	NA	NA	NA	136622260	136622073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_136622100_136622300
m54284U_201013_031047/130811105/ccs	chr4	+	183	1	Intergenic	novelGene_2003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGCAAGAATAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	108760809	108760992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_108760800_108761000
m54284U_201013_031047/130878032/ccs	chr7	+	174	1	Intergenic	novelGene_3770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAATATATATATA	NA	False	NA	NA	False	NA	NA	NA	29753656	29753830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29753700_29753800
m54284U_201013_031047/131401178/ccs	chr9	+	194	1	Intergenic	novelGene_5102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTACTGATACATTATG	NA	False	NA	NA	False	NA	NA	NA	109846015	109846209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_109846000_109846200
m54284U_201013_031047/131531222/ccs	chr7	+	340	1	Intergenic	novelGene_4014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	109584075	109584415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109584100_109584400
m54284U_201013_031047/131727445/ccs	chr12	-	181	1	Intergenic	novelGene_6730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATACATATATTTT	NA	False	NA	NA	False	NA	NA	NA	76279646	76279465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_76279500_76279600
m54284U_201013_031047/131728686/ccs	chr7	-	200	1	Intergenic	novelGene_4079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTTTCCTTTTGAAAT	NA	False	NA	NA	False	NA	NA	NA	125897177	125896977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_125897000_125897200
m54284U_201013_031047/131793867/ccs	chr6	+	163	1	Intergenic	novelGene_3599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAATTGAAGCACAG	NA	False	NA	NA	False	NA	NA	NA	149322560	149322723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_149322600_149322700
m54284U_201013_031047/131991349/ccs	chr5	-	2694	3	NIC	ENSMUSG00000044339.13	novel	899	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	267	junction_2	145	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTGTATTTGGGGGGGG	7978	False	NA	-11	True	AATAAA	-13	NA	114266279	114261995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_114262316_114263592_114265831_114266143
m54284U_201013_031047/132055517/ccs	chr8	+	288	1	Intergenic	novelGene_4356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCTATAAATATGTGA	NA	False	NA	NA	False	AATGAA	-8	NA	80334433	80334721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_80334400_80334700
m54284U_201013_031047/132057653/ccs	chr15	+	177	1	Intergenic	novelGene_7970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTTTTTTAAAGAGT	6536	False	NA	NA	False	NA	NA	NA	99698759	99698936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99698800_99698900
m54284U_201013_031047/132122341/ccs	chr1	+	4057	1	Antisense	novelGene_ENSMUSG00000026234.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86271682	86275739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_86271700_86275700
m54284U_201013_031047/132123368/ccs	chr4	+	197	1	Intergenic	novelGene_1745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGATTGGCTGCCATAT	7791	False	NA	NA	False	NA	NA	NA	11210202	11210399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_11210200_11210400
m54284U_201013_031047/132187968/ccs	chr14	+	227	1	Intergenic	novelGene_7396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTACATTAAAGTACTACA	NA	False	NA	NA	False	AATAAA	-41	NA	34408214	34408441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_34408200_34408400
m54284U_201013_031047/13240672/ccs	chr5	-	190	1	Intergenic	novelGene_2664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTAAATCTGTTATTTG	9804	False	NA	NA	False	NA	NA	NA	92252991	92252801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92252800_92253000
m54284U_201013_031047/132450998/ccs	chr2	+	178	1	Intergenic	novelGene_949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGAATGGAGATG	NA	False	NA	NA	False	NA	NA	NA	92341978	92342156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_92342000_92342200
m54284U_201013_031047/132712543/ccs	chr2	+	184	1	Intergenic	novelGene_902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCAAACATTTGTTTAT	523	False	NA	NA	False	NA	NA	NA	84550462	84550646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_84550500_84550600
m54284U_201013_031047/132712958/ccs	chr5	+	198	1	Intergenic	novelGene_2957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTCGTCTACATAGCAAG	4617	False	NA	NA	False	NA	NA	NA	134188639	134188837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_134188600_134188800
m54284U_201013_031047/132713172/ccs	chr14	+	189	1	Intergenic	novelGene_7566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATCTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86241248	86241437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_86241200_86241400
m54284U_201013_031047/13306064/ccs	chr4	+	175	1	Intergenic	novelGene_1822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGGAGATGAGA	NA	False	NA	NA	False	NA	NA	NA	43035147	43035322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_43035100_43035300
m54284U_201013_031047/133103774/ccs	chr10	-	2589	14	NIC	ENSMUSG00000019467.16	novel	2475	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_8	9.21922354866377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGTTGTTGTCTTGGG	6184	False	NA	-4	True	AATAAA	-15	NA	127024641	127018394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
m54284U_201013_031047/133106229/ccs	chr10	+	177	1	Intergenic	novelGene_5570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTGCCACAGAT	NA	False	NA	NA	False	NA	NA	NA	120281767	120281944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_120281800_120281900
m54284U_201013_031047/133169553/ccs	chr4	+	166	1	Intergenic	novelGene_1867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTACAAAAAAAAAAGATTGG	8806	False	NA	NA	False	NA	NA	NA	52448916	52449082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_52448900_52449100
m54284U_201013_031047/133234967/ccs	chr17	+	185	1	Intergenic	novelGene_8617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATACTGTGCTGGCCATG	NA	False	NA	NA	False	NA	NA	NA	46846813	46846998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_46846800_46847000
m54284U_201013_031047/133368324/ccs	chr8	+	173	1	Intergenic	novelGene_4590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAGGAGCTTG	NA	False	NA	NA	False	NA	NA	NA	124536311	124536484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_124536300_124536500
m54284U_201013_031047/133433397/ccs	chr15	+	3065	1	NIC	ENSMUSG00000022553.17	novel	1651	8	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAACCTGGGAGTTTGT	NA	False	NA	24	True	AATAAA	-16	NA	76235508	76238573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76235500_76238600
m54284U_201013_031047/13370183/ccs	chr6	+	2127	1	Intergenic	novelGene_3396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAATGGGTTAATATAA	6430	False	NA	NA	False	NA	NA	NA	94228386	94230513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_94228400_94230500
m54284U_201013_031047/13370569/ccs	chr1	+	177	1	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	30479054	30479231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_30479100_30479200
m54284U_201013_031047/133824857/ccs	chr17	+	179	1	Intergenic	novelGene_8532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATATATCACCTAC	NA	False	NA	NA	False	NA	NA	NA	33733779	33733958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_33733800_33734000
m54284U_201013_031047/133891243/ccs	chr10	-	178	1	Intergenic	novelGene_5325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGACTTGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	60918232	60918054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_60918100_60918200
m54284U_201013_031047/133955595/ccs	chr9	-	182	1	Intergenic	novelGene_5074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTTTATTTTGT	NA	False	NA	NA	False	NA	NA	NA	107758294	107758112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_107758100_107758300
m54284U_201013_031047/133957256/ccs	chr14	+	178	1	Intergenic	novelGene_7332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGAAATCT	NA	False	NA	NA	False	NA	NA	NA	8462649	8462827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_8462600_8462800
m54284U_201013_031047/133958176/ccs	chr17	+	158	1	Intergenic	novelGene_8760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACAGAAAATAAATTCT	NA	False	NA	NA	False	NA	NA	NA	84438218	84438376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_84438200_84438400
m54284U_201013_031047/134087267/ccs	chr8	-	3351	15	NIC	ENSMUSG00000006276.11	novel	3376	16	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	92.4470339255546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTGTTCAGTGTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	73175316	73131261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73175248
m54284U_201013_031047/134349080/ccs	chr8	+	158	1	Intergenic	novelGene_4218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATAAATAT	5924	False	NA	NA	False	NA	NA	NA	18888159	18888317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_18888200_18888300
m54284U_201013_031047/13435763/ccs	chr8	+	202	1	Intergenic	novelGene_4487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCAGGAATCTGATAC	NA	False	NA	NA	False	NA	NA	NA	111489874	111490076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111489900_111490100
m54284U_201013_031047/13437340/ccs	chr7	+	249	1	Intergenic	novelGene_3727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGCTCATAAGGACTAT	NA	False	NA	NA	False	NA	NA	NA	27208951	27209200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_27209000_27209200
m54284U_201013_031047/134676521/ccs	chr12	+	209	1	Intergenic	novelGene_6554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGTCTGAGCTTTATGT	NA	False	NA	NA	False	NA	NA	NA	4975935	4976144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_4975900_4976100
m54284U_201013_031047/134744308/ccs	chr1	-	1387	1	ISM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	118148	3743	5325	-3743	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTAAATATGTCTCAGCT	NA	False	NA	NA	False	NA	NA	NA	181729078	181727691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_181727700_181729100
m54284U_201013_031047/134807734/ccs	chr9	-	200	1	Intergenic	novelGene_4915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAAGCAAAGTGTTTTT	7652	False	NA	NA	False	NA	NA	NA	70535515	70535315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_70535300_70535500
m54284U_201013_031047/135203471/ccs	chr12	+	175	1	Antisense	novelGene_ENSMUSG00000020664.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAACCCTTTG	3206	False	NA	NA	False	NA	NA	NA	31394052	31394227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_+_31394100_31394200
m54284U_201013_031047/135332294/ccs	chr3	+	181	1	Intergenic	novelGene_1685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	130529146	130529327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_130529100_130529300
m54284U_201013_031047/135398597/ccs	chr7	+	200	1	Antisense	novelGene_ENSMUSG00000049600.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATCCAAGTCTAGGATA	NA	False	NA	NA	False	NA	NA	NA	12739259	12739459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_12739300_12739500
m54284U_201013_031047/135463600/ccs	chr18	+	174	1	Intergenic	novelGene_9012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAGAACCCCCCATTG	NA	False	NA	NA	False	NA	NA	NA	73697835	73698009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_73697800_73698000
m54284U_201013_031047/13566630/ccs	chrX	+	190	1	Intergenic	novelGene_9632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACTAAGACAGAAGTCAT	NA	False	NA	NA	False	NA	NA	NA	133799618	133799808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_133799600_133799800
m54284U_201013_031047/13566956/ccs	chr14	+	137	1	Antisense	novelGene_ENSMUSG00000022020.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTAAAAAGATATATTCA	NA	False	NA	NA	False	NA	NA	NA	79570032	79570169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_79570000_79570200
m54284U_201013_031047/13632443/ccs	chr11	+	318	1	Intergenic	novelGene_6516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTTTCCATTACGTAC	6148	False	NA	11	True	AATAAA	-20	NA	120464268	120464586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120464300_120464600
m54284U_201013_031047/136380568/ccs	chr17	-	204	1	Intergenic	novelGene_8497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTGTGAACCACTT	NA	False	NA	NA	False	NA	NA	NA	29827636	29827432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29827400_29827600
m54284U_201013_031047/136381195/ccs	chr2	+	2614	17	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_7	20.740114362028	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	8	True	AATAAA	-19	NA	32253021	32268311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261126_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
m54284U_201013_031047/136840975/ccs	chr11	+	155	1	Intergenic	novelGene_6106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	80080215	80080370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_80080200_80080400
m54284U_201013_031047/136905072/ccs	chr12	+	203	1	Intergenic	novelGene_6798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGAACTGCCGGGCGGT	2535	False	NA	NA	False	NA	NA	NA	84319659	84319862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_84319700_84319900
m54284U_201013_031047/13697044/ccs	chr7	+	200	1	Intergenic	novelGene_3645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGCTGCAGAAGCACCA	NA	False	NA	NA	False	NA	NA	NA	9872460	9872660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_9872500_9872700
m54284U_201013_031047/137365418/ccs	chr8	-	175	1	Intergenic	novelGene_4474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACAAAACCCTCTATAT	NA	False	NA	NA	False	NA	NA	NA	107919936	107919761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107919800_107919900
m54284U_201013_031047/137562650/ccs	chr10	-	171	1	Intergenic	novelGene_5450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	80462943	80462772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_80462800_80462900
m54284U_201013_031047/13764392/ccs	chr12	-	186	1	Intergenic	novelGene_6688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGGGTTTTTAGTTGTT	NA	False	NA	NA	False	NA	NA	NA	69779800	69779614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_69779600_69779800
m54284U_201013_031047/137758907/ccs	chr15	-	180	1	Intergenic	novelGene_7768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACTCATTTCCACATATA	8820	False	NA	NA	False	NA	NA	NA	75900760	75900580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_75900600_75900800
m54284U_201013_031047/1377990/ccs	chr4	+	190	1	Intergenic	novelGene_1894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTATTTGTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62472844	62473034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_62472800_62473000
m54284U_201013_031047/1378026/ccs	chr7	+	166	1	Intergenic	novelGene_3944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAAGAAAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	88992133	88992299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_88992100_88992300
m54284U_201013_031047/137887827/ccs	chr4	-	5462	1	NIC	ENSMUSG00000028435.9	novel	1765	6	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTGTGTGTGTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	41098183	41092721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_41092700_41098200
m54284U_201013_031047/137954624/ccs	chr6	+	1833	1	Intergenic	novelGene_3286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	54800089	54801922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_54800100_54801900
m54284U_201013_031047/138149989/ccs	chr5	+	1873	1	Intergenic	novelGene_2530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAAACAAAACAAAACAA	528	False	NA	NA	False	NA	NA	NA	32979671	32981544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_32979700_32981500
m54284U_201013_031047/138282527/ccs	chrX	-	176	1	Intergenic	novelGene_9392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAGTAAATATCTTT	NA	False	NA	NA	False	NA	NA	NA	12797447	12797271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_12797300_12797400
m54284U_201013_031047/13830295/ccs	chr5	+	173	1	Intergenic	novelGene_2994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATAAATAAAAA	6952	False	NA	NA	False	NA	NA	NA	136926560	136926733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_136926600_136926700
m54284U_201013_031047/13830469/ccs	chr16	+	217	1	Intergenic	novelGene_8272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAGCTTCAGTAAGCA	NA	False	NA	NA	False	NA	NA	NA	48201533	48201750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_48201500_48201800
m54284U_201013_031047/138478941/ccs	chr17	+	3650	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	203.276172406977	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8796	False	NA	32	True	AATAAA	-33	NA	35354461	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201013_031047/138479843/ccs	chr8	+	177	1	Intergenic	novelGene_4399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATCAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	89661696	89661873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_89661700_89661900
m54284U_201013_031047/138937457/ccs	chr5	-	2091	1	FSM	ENSMUSG00000024437.7	ENSMUST00000025307.7	771	1	0	-1320	0	989	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGTTCTTTATTTCCA	NA	False	NA	NA	False	AATAAA	-8	NA	149093019	149090928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_149090900_149093000
m54284U_201013_031047/139004552/ccs	chr17	+	196	1	Intergenic	novelGene_8777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTTAAGCATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	88392180	88392376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_88392200_88392400
m54284U_201013_031047/139266564/ccs	chr8	+	172	1	Intergenic	novelGene_4586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTTTAATCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	124146109	124146281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_124146100_124146300
m54284U_201013_031047/139330598/ccs	chr10	+	489	1	FSM	ENSMUSG00000064317.6	ENSMUST00000072739.6	309	1	-16	-164	-16	164	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTAATTTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	78229137	78229626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_78229100_78229600
m54284U_201013_031047/139396209/ccs	chr11	-	196	1	Intergenic	novelGene_6363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGATAGCTTTTTGATG	NA	False	NA	NA	False	NA	NA	NA	103840854	103840658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_103840700_103840900
m54284U_201013_031047/139594448/ccs	chr12	+	169	1	Intergenic	novelGene_6935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAACAAACCAACCA	NA	False	NA	NA	False	NA	NA	NA	113043490	113043659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_113043500_113043700
m54284U_201013_031047/13960506/ccs	chr6	-	186	1	Intergenic	novelGene_3459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAACTACGTGAATGA	NA	False	NA	NA	False	NA	NA	NA	120369532	120369346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120369300_120369500
m54284U_201013_031047/139854130/ccs	chr2	+	1876	1	Genic_Genomic	ENSMUSG00000017861.12	novel	NA	NA	NA	NA	-69	-7981	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTGATAATGTTTAGTAG	NA	False	NA	NA	False	AATAGA	-37	NA	162896537	162898413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_162896500_162898400
m54284U_201013_031047/139855787/ccs	chrX	-	200	1	Intergenic	novelGene_9492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGTGGAAATATAGAATG	NA	False	NA	NA	False	NA	NA	NA	71944772	71944572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_71944600_71944800
m54284U_201013_031047/140052385/ccs	chr4	-	4014	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_3	55.4637018438386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	-7	True	NA	-7	True	AATAAA	-21	NA	43025819	43017634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
m54284U_201013_031047/140248940/ccs	chr2	+	170	1	Intergenic	novelGene_583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGATTCTTGTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	5991428	5991598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_5991400_5991600
m54284U_201013_031047/140313560/ccs	chr19	+	1480	1	NIC	ENSMUSG00000117924.2	novel	748	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATTCTGTCCTCTCTCTC	6519	False	NA	NA	False	AATAAA	-38	NA	8748359	8749839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8748400_8749800
m54284U_201013_031047/140445023/ccs	chr11	+	175	1	Intergenic	novelGene_6030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAAAATGA	1289	False	NA	NA	False	NA	NA	NA	76090723	76090898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76090700_76090900
m54284U_201013_031047/140445873/ccs	chr13	+	198	1	Intergenic	novelGene_7304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTGTTTCATTGTAGC	NA	False	NA	NA	False	NA	NA	NA	111731958	111732156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_111732000_111732200
m54284U_201013_031047/140510656/ccs	chrX	-	1033	1	Intergenic	novelGene_9455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTAGCTCAGGGCCAGTT	NA	False	NA	NA	False	NA	NA	NA	50205008	50203975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_50204000_50205000
m54284U_201013_031047/140510873/ccs	chr3	+	4634	1	NIC	ENSMUSG00000034640.10	novel	4191	6	NA	NA	0	-14504	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAGTTTGAATTCTCA	NA	False	NA	NA	False	NA	NA	NA	65435880	65440514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_65435900_65440500
m54284U_201013_031047/140902585/ccs	chrX	-	3410	10	NNC	ENSMUSG00000036022.16	novel	4334	9	NA	NA	0	-136	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	31.8956632370818	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCTTGACTGACTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	52358682	52332437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
m54284U_201013_031047/141296856/ccs	chr16	+	3068	1	NIC	ENSMUSG00000075229.12	novel	1073	5	NA	NA	-160	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTACATATTTATTT	NA	False	NA	16	True	ATTAAA	-13	NA	35909413	35912481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_35909400_35912500
m54284U_201013_031047/141428867/ccs	chr1	-	184	1	ISM	ENSMUSG00000052748.15	ENSMUST00000131312.2	5176	2	5517	1325	-4848	-1325	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAACTGGGTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	151293578	151293394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_151293400_151293600
m54284U_201013_031047/141558006/ccs	chr6	+	195	1	Intergenic	novelGene_3465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCTTGTTTCAAAAACT	NA	False	NA	NA	False	NA	NA	NA	120571189	120571384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120571200_120571400
m54284U_201013_031047/14155853/ccs	chr11	-	216	1	Intergenic	novelGene_5688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCACAGGACCAAAGCCAAA	7226	False	NA	NA	False	NA	NA	NA	6284934	6284718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_6284700_6284900
m54284U_201013_031047/141558817/ccs	chr12	-	5267	8	ISM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	2885	645	2515	-645	3prime_fragment	FALSE	canonical	3	931	junction_7	68.2824266991029	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATGTTGCTTGCTTTGCT	4130	False	NA	NA	False	ATTAAA	-20	NA	91553898	91522680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473
m54284U_201013_031047/141624422/ccs	chr1	-	5182	1	ISM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	9314	186	1125	-186	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACAGCCTGTGTTTGAT	NA	False	NA	-6	True	AGTAAA	-17	NA	86277808	86272626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_86272600_86277800
m54284U_201013_031047/141690018/ccs	chr10	+	176	1	Intergenic	novelGene_5318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAGAAAATAA	9060	False	NA	NA	False	NA	NA	NA	60071557	60071733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_60071600_60071700
m54284U_201013_031047/141691508/ccs	chr10	+	183	1	Intergenic	novelGene_5307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAAATACTAATATTGT	2556	False	NA	NA	False	NA	NA	NA	58396944	58397127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_58396900_58397100
m54284U_201013_031047/141885810/ccs	chr11	+	190	1	Intergenic	novelGene_5780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAGAAAAGCAAGGACCAC	NA	False	NA	NA	False	NA	NA	NA	43258174	43258364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_43258200_43258400
m54284U_201013_031047/141885927/ccs	chr11	-	166	1	Intergenic	novelGene_5899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTTAAAAAAAGACAG	NA	False	NA	NA	False	NA	NA	NA	61676180	61676014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_61676000_61676200
m54284U_201013_031047/142084610/ccs	chr9	-	164	1	Intergenic	novelGene_5082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATTTAAAAAAAGACTC	1023	False	NA	-1	True	NA	NA	NA	108160461	108160297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_108160300_108160500
m54284U_201013_031047/142608385/ccs	chr11	+	198	1	Intergenic	novelGene_5839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGAAGAGATCAGCTTAC	NA	False	NA	NA	False	NA	NA	NA	53646350	53646548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53646400_53646500
m54284U_201013_031047/142674393/ccs	chr1	+	176	1	Intergenic	novelGene_346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGCAGTACAG	NA	False	NA	NA	False	NA	NA	NA	136130294	136130470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_136130300_136130500
m54284U_201013_031047/142738648/ccs	chr5	-	215	1	Intergenic	novelGene_2861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCCTGGAGGATCCGGC	NA	False	NA	NA	False	NA	NA	NA	121876707	121876492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121876500_121876700
m54284U_201013_031047/142936725/ccs	chr10	-	208	1	Intergenic	novelGene_5591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTTTAAAATAAGAATT	NA	False	NA	NA	False	AATAAA	-41	NA	125636076	125635868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_125635900_125636100
m54284U_201013_031047/143198966/ccs	chr15	-	183	1	Intergenic	novelGene_7608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTTAGACCAGGTGTA	NA	False	NA	NA	False	NA	NA	NA	5072205	5072022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_5072000_5072200
m54284U_201013_031047/143262547/ccs	chr14	+	208	1	Intergenic	novelGene_7423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACAGGTTTGTGATGTA	NA	False	NA	NA	False	NA	NA	NA	47935615	47935823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_47935600_47935800
m54284U_201013_031047/143458507/ccs	chr3	+	200	1	Intergenic	novelGene_1449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	3426	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAACTGTGAGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	83737591	83737791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_83737600_83737800
m54284U_201013_031047/143721360/ccs	chr9	+	189	1	Intergenic	novelGene_4878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGGCTTCTCACACCTCC	4958	False	NA	NA	False	NA	NA	NA	65026757	65026946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_65026800_65026900
m54284U_201013_031047/143721778/ccs	chr5	-	3248	1	ISM	ENSMUSG00000045302.14	ENSMUST00000201821.4	5118	3	4316	818	1265	-818	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGATCCTGTTCTATCTT	NA	False	NA	NA	False	CATAAA	-17	NA	31112262	31109014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_31109000_31112300
m54284U_201013_031047/143723266/ccs	chrX	+	164	1	Intergenic	novelGene_9501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAAAATTGTTGTG	NA	False	NA	NA	False	NA	NA	NA	73040199	73040363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_73040200_73040400
m54284U_201013_031047/143788831/ccs	chr18	+	174	1	Intergenic	novelGene_8893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCCTCCTATTCAT	NA	False	NA	NA	False	NA	NA	NA	35678603	35678777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35678600_35678800
m54284U_201013_031047/14418301/ccs	chr1	+	176	1	Intergenic	novelGene_467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTTTAAAAATTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	170759410	170759586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_170759400_170759600
m54284U_201013_031047/14419840/ccs	chrX	+	196	1	Intergenic	novelGene_9401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCATCCATCCTGACCAA	NA	False	NA	NA	False	NA	NA	NA	14429448	14429644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_14429400_14429600
m54284U_201013_031047/144247558/ccs	chr4	-	204	1	Intergenic	novelGene_1751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGAGGTTTCACACT	NA	False	NA	NA	False	NA	NA	NA	11484802	11484598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11484600_11484800
m54284U_201013_031047/144376151/ccs	chr5	-	351	1	Intergenic	novelGene_3039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTAAAAGAAACCA	NA	False	NA	NA	False	NA	NA	NA	142883275	142882924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142882900_142883300
m54284U_201013_031047/144378006/ccs	chr2	-	176	1	Intergenic	novelGene_878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATCAATGCATA	NA	False	NA	NA	False	NA	NA	NA	76441971	76441795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_76441800_76442000
m54284U_201013_031047/144640117/ccschrUn	chrUn_GL456368v1	+	183	1	Intergenic	novelGene_9782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGCTTGTCCTAGAGT	NA	False	NA	NA	False	NA	NA	NA	18098	18281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_GL456368v1_+_18100_18300
m54284U_201013_031047/144837194/ccs	chr16	-	191	1	Intergenic	novelGene_8047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAACTTAATAGCACA	2569	False	NA	NA	False	NA	NA	NA	8621361	8621170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_8621200_8621400
m54284U_201013_031047/14483968/ccs	chr2	+	186	1	Intergenic	novelGene_733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGTGCCTGGAGTCAT	NA	False	NA	NA	False	NA	NA	NA	33331364	33331550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33331400_33331600
m54284U_201013_031047/14484204/ccs	chr6	+	190	1	Intergenic	novelGene_3335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGACACAAGCTTGGTT	NA	False	NA	NA	False	NA	NA	NA	77352612	77352802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_77352600_77352800
m54284U_201013_031047/144900585/ccs	chr6	-	198	1	Intergenic	novelGene_3111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCTTGTGTAACTGTC	NA	False	NA	NA	False	NA	NA	NA	15983639	15983441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_15983400_15983600
m54284U_201013_031047/145031945/ccs	chr1	-	6664	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9550	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_42	302.374837770948	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	NA	False	NA	17	True	NA	NA	NA	84827787	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84827643
m54284U_201013_031047/145033419/ccs	chrX	-	192	1	Intergenic	novelGene_9681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACAAAAGAACCTGAGT	NA	False	NA	NA	False	NA	NA	NA	151986360	151986168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_151986200_151986400
m54284U_201013_031047/145227868/ccs	chr8	+	2304	1	NIC	ENSMUSG00000031807.11	novel	893	5	NA	NA	0	-624	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTACAGACCTCATACCAT	NA	False	NA	NA	False	NA	NA	NA	72044827	72047131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_72044800_72047100
m54284U_201013_031047/145687364/ccs	chr4	-	2892	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_10	477.272626493496	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGAGTCTTTGTGGTC	NA	False	NA	-2	True	AATAAA	-24	NA	137509502	137469043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137485882_137486044_137509471
m54284U_201013_031047/145688773/ccs	chr5	-	3727	2	NIC	ENSMUSG00000029610.14	novel	1185	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTTATTTTATTTTAA	NA	False	NA	-18	True	AATAAA	-16	NA	143846606	143839521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_143840009_143843366
m54284U_201013_031047/145688986/ccs	chr5	-	5716	1	ISM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	85942	0	10885	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTCTTGGGTTTTGAT	NA	False	NA	-1	True	AATAAA	-20	NA	96223907	96218191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_96218200_96223900
m54284U_201013_031047/145752149/ccs	chr11	+	178	1	Intergenic	novelGene_6500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAATTCCAC	181	False	NA	NA	False	NA	NA	NA	119275076	119275254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_119275100_119275300
m54284U_201013_031047/145818975/ccs	chr3	+	154	1	Intergenic	novelGene_1475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAAATTT	9742	False	NA	NA	False	NA	NA	NA	87986953	87987107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_87987000_87987100
m54284U_201013_031047/146147572/ccs	chr11	+	162	1	Intergenic	novelGene_5651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAGAAAAGCATTCCTC	NA	False	NA	NA	False	NA	NA	NA	3387467	3387629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_3387500_3387600
m54284U_201013_031047/146211823/ccs	chr9	-	161	1	Intergenic	novelGene_4667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATCTTAAAAAAAATAATAA	9532	False	NA	NA	False	NA	NA	NA	21760655	21760494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21760500_21760700
m54284U_201013_031047/146344629/ccs	chr3	+	3508	1	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	-8148	3404	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGTGTCATTACAGT	NA	False	NA	NA	False	AATAAA	-15	NA	152133387	152136895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152133400_152136900
m54284U_201013_031047/146606875/ccs	chr18	+	174	1	Intergenic	novelGene_8934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGGTAGAAGAA	7922	False	NA	NA	False	NA	NA	NA	42406306	42406480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_42406300_42406500
m54284U_201013_031047/146737784/ccs	chr7	+	185	1	Intergenic	novelGene_4071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAATAACTTTAAA	NA	False	NA	NA	False	NA	NA	NA	122747428	122747613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_122747400_122747600
m54284U_201013_031047/146801363/ccs	chr1	+	159	1	Intergenic	novelGene_167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65153923	65154082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_65153900_65154100
m54284U_201013_031047/146867241/ccs	chr6	+	177	1	Intergenic	novelGene_3340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGATTTGCTTATT	NA	False	NA	NA	False	NA	NA	NA	83074151	83074328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_83074200_83074300
m54284U_201013_031047/146867971/ccs	chrX	+	3306	1	Intergenic	novelGene_9598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGGGTCAGGGATTT	NA	False	NA	NA	False	NA	NA	NA	104960792	104964098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_104960800_104964100
m54284U_201013_031047/147128640/ccs	chr8	+	173	1	Intergenic	novelGene_4254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTATAATCCTT	NA	False	NA	NA	False	NA	NA	NA	28427060	28427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_28427100_28427200
m54284U_201013_031047/147194263/ccs	chr10	+	177	1	Intergenic	novelGene_5404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAAAATTTTGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	75299803	75299980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75299800_75300000
m54284U_201013_031047/147260747/ccs	chr19	+	179	1	Intergenic	novelGene_9320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTTAAGATCATCCT	NA	False	NA	NA	False	NA	NA	NA	46829883	46830062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46829900_46830100
m54284U_201013_031047/147391719/ccs	chr7	+	171	1	Intergenic	novelGene_3748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAAATTAATGTC	NA	False	NA	NA	False	NA	NA	NA	28421862	28422033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28421900_28422000
m54284U_201013_031047/147392873/ccs	chr14	+	178	1	Intergenic	novelGene_7439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAACAAACCCAAACCAAC	NA	False	NA	NA	False	NA	NA	NA	52298104	52298282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_52298100_52298300
m54284U_201013_031047/14748182/ccs	chr2	-	145	1	Intergenic	novelGene_856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGATTTATTATTAA	NA	False	NA	NA	False	NA	NA	NA	72509592	72509447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_72509400_72509600
m54284U_201013_031047/147587848/ccs	chr8	+	177	1	Intergenic	novelGene_4593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	124597544	124597721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_124597500_124597700
m54284U_201013_031047/147652616/ccs	chr9	-	5639	19	NNC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	0	-71	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	95.5610463538722	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53581314	53525952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569974_53581150
m54284U_201013_031047/147785163/ccs	chr2	+	175	1	Intergenic	novelGene_1093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTATTT	NA	False	NA	NA	False	NA	NA	NA	141412428	141412603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_141412400_141412600
m54284U_201013_031047/147851415/ccs	chr12	-	198	1	Intergenic	novelGene_6799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAGAGATACTAAGTAGG	NA	False	NA	NA	False	NA	NA	NA	84348448	84348250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_84348200_84348400
m54284U_201013_031047/147851517/ccs	chr9	+	187	1	Intergenic	novelGene_4713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTCTATCAGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	37396128	37396315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_37396100_37396300
m54284U_201013_031047/147981047/ccs	chr18	+	181	1	Intergenic	novelGene_9045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTATAAGAGTTGCCT	NA	False	NA	NA	False	NA	NA	NA	80079157	80079338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_80079200_80079300
m54284U_201013_031047/147983066/ccs	chr1	-	2703	1	Antisense	novelGene_ENSMUSG00000066652.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTTGTGTTTTTATTA	NA	False	NA	NA	False	TATAAA	-6	NA	180722368	180719665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_180719700_180722400
m54284U_201013_031047/148111441/ccs	chr6	+	5794	1	Intergenic	novelGene_3413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100215314	100221108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_100215300_100221100
m54284U_201013_031047/148243133/ccs	chr1	-	186	1	Antisense	novelGene_ENSMUSG00000102633.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCACAGTTGATTTTCA	NA	False	NA	NA	False	NA	NA	NA	21306601	21306415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_21306400_21306600
m54284U_201013_031047/148375967/ccs	chr17	+	178	1	Intergenic	novelGene_8732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACTACCACCTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	79050928	79051106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_79050900_79051100
m54284U_201013_031047/148506952/ccs	chr14	-	146	1	Intergenic	novelGene_7363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	26316423	26316277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26316300_26316400
m54284U_201013_031047/148637783/ccs	chr4	-	176	1	Intergenic	novelGene_2091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTTAAGTTACGC	NA	False	NA	NA	False	NA	NA	NA	123651235	123651059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_123651100_123651200
m54284U_201013_031047/148704049/ccs	chr12	+	183	1	Intergenic	novelGene_6587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	2975	False	NA	NA	False	NA	NA	NA	21420854	21421037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_21420900_21421000
m54284U_201013_031047/14879175/ccs	chr6	+	200	1	Intergenic	novelGene_3108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGAACAGTCACTCTC	NA	False	NA	NA	False	NA	NA	NA	12831373	12831573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_12831400_12831600
m54284U_201013_031047/149028977/ccs	chr3	+	186	1	FSM	ENSMUSG00000103273.2	ENSMUST00000192925.2	2544	1	1830	528	1830	-528	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGGGGATATTTGAGG	NA	False	NA	NA	False	NA	NA	NA	93215604	93215790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_93215600_93215800
m54284U_201013_031047/149029637/ccs	chr9	-	194	1	Intergenic	novelGene_5083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGCTCTGCCTGCACC	NA	False	NA	NA	False	NA	NA	NA	108165191	108164997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_108165000_108165200
m54284U_201013_031047/149094852/ccs	chr4	-	212	1	Intergenic	novelGene_1786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGACCTCACCGACAGA	NA	False	NA	NA	False	NA	NA	NA	33006219	33006007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_33006000_33006200
m54284U_201013_031047/149095039/ccs	chr1	-	162	1	Intergenic	novelGene_463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGGAACTCGGAAA	NA	False	NA	NA	False	NA	NA	NA	168272176	168272014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_168272000_168272200
m54284U_201013_031047/149358722/ccs	chr7	-	182	1	Intergenic	novelGene_3701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTGACTTATGATC	2062	False	NA	-2	True	NA	NA	NA	24297334	24297152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_24297200_24297300
m54284U_201013_031047/14944996/ccs	chr2	+	173	1	Intergenic	novelGene_766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCTTGACTGC	NA	False	NA	NA	False	NA	NA	NA	37356826	37356999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_37356800_37357000
m54284U_201013_031047/149553601/ccs	chr4	-	1806	7	NIC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	50	junction_1	390.616926583236	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_148702195_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
m54284U_201013_031047/149554779/ccs	chr2	-	209	1	Intergenic	novelGene_1211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTCAAATGGCCAAGAA	NA	False	NA	NA	False	NA	NA	NA	163937536	163937327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_163937300_163937500
m54284U_201013_031047/149555836/ccs	chr4	+	223	1	Intergenic	novelGene_1913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGAAAATTGGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	83231912	83232135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_83231900_83232100
m54284U_201013_031047/149684294/ccs	chr9	+	195	1	Intergenic	novelGene_4944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGCCAGATTTTTAAAAA	6129	False	NA	NA	False	NA	NA	NA	73051026	73051221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_73051000_73051200
m54284U_201013_031047/150077922/ccs	chr13	+	175	1	Intergenic	novelGene_7302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATTTGGCTGGTAGAA	NA	False	NA	NA	False	NA	NA	NA	111681202	111681377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_111681200_111681400
m54284U_201013_031047/150079891/ccs	chr5	-	158	1	Intergenic	novelGene_3065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAATAATTTTT	NA	False	NA	NA	False	NA	NA	NA	145215036	145214878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_145214900_145215000
m54284U_201013_031047/150405521/ccs	chr11	+	181	1	Intergenic	novelGene_6348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAACATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	102010478	102010659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_102010500_102010700
m54284U_201013_031047/150472959/ccs	chr9	+	191	1	Intergenic	novelGene_4625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCCTTAGCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	6837505	6837696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_6837500_6837700
m54284U_201013_031047/150537586/ccs	chr15	+	217	1	Intergenic	novelGene_7985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTTACTCTCAGAGGG	NA	False	NA	NA	False	NA	NA	NA	100098548	100098765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_100098500_100098800
m54284U_201013_031047/150735442/ccs	chr6	+	183	1	Intergenic	novelGene_3533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTATTTGAAACACATA	NA	False	NA	NA	False	NA	NA	NA	128588996	128589179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_128589000_128589200
m54284U_201013_031047/151193253/ccs	chr2	+	193	1	Intergenic	novelGene_707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCAGACCCAGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	31638604	31638797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_31638600_31638800
m54284U_201013_031047/151193628/ccs	chr14	-	180	1	Intergenic	novelGene_7354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGGGGGAACCTGTGGG	NA	False	NA	NA	False	NA	NA	NA	22021651	22021471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_22021500_22021700
m54284U_201013_031047/151325522/ccs	chr5	-	194	1	Intergenic	novelGene_2519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGATCTCTGTGGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	31275711	31275517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_31275500_31275700
m54284U_201013_031047/151389612/ccs	chr14	-	2816	4	NNC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_1	319.606355102996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168313	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_51166389_51166462_51167148_51167590_51167782_51168090
m54284U_201013_031047/15139399/ccs	chr6	-	162	1	Intergenic	novelGene_3438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTAGATGATTCTCCG	NA	False	NA	NA	False	NA	NA	NA	117785619	117785457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_117785500_117785600
m54284U_201013_031047/151585941/ccs	chr11	+	1804	1	Antisense	novelGene_ENSMUSG00000013415.10_AS_novelGene_ENSMUSG00000093358.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAAGGTGGC	NA	False	NA	NA	False	NA	NA	NA	95853891	95855695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_95853900_95855700
m54284U_201013_031047/151650372/ccs	chr11	+	187	1	Intergenic	novelGene_6420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGATCACCAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	107368882	107369069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107368900_107369100
m54284U_201013_031047/151718444/ccs	chr4	+	187	1	Intergenic	novelGene_1910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAAGGCATCAAGCCTA	NA	False	NA	NA	False	NA	NA	NA	81873829	81874016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_81873800_81874000
m54284U_201013_031047/152043679/ccs	chr8	+	189	1	Intergenic	novelGene_4370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCATGATCATGGTG	2463	False	NA	NA	False	NA	NA	NA	85029338	85029527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_85029300_85029500
m54284U_201013_031047/152305840/ccs	chr16	+	252	1	Intergenic	novelGene_8100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAGCTCAGATATGATA	5149	False	NA	NA	False	AAAAAG	-41	NA	17186790	17187042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17186800_17187000
m54284U_201013_031047/152305916/ccs	chr8	+	4773	5	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2_ENSMUSG00000095403.9	novel	955	5	NA	NA	-132	-180	multi-exon	FALSE	canonical	0	0	junction_3	260.033651668395	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697852	21122607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_21116684_21116805_21118696
m54284U_201013_031047/152371924/ccs	chr9	+	191	1	Intergenic	novelGene_4711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTACTTAAAGAAATAAT	NA	False	NA	NA	False	NA	NA	NA	37360193	37360384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_37360200_37360400
m54284U_201013_031047/152502529/ccs	chr5	-	5641	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	530	junction_11	186.708221723553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957963	110932353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
m54284U_201013_031047/152634691/ccs	chr11	+	202	1	Intergenic	novelGene_5887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGAGATTGGTT	3310	False	NA	NA	False	NA	NA	NA	60731801	60732003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_60731800_60732000
m54284U_201013_031047/152700124/ccs	chr11	-	4109	18	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	27.8463406055644	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTAAGAATGTTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	69214601	69190312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209867_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
m54284U_201013_031047/15271343/ccs	chr13	+	2993	1	Antisense	novelGene_ENSMUSG00000016018.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	1848	False	NA	NA	False	NA	NA	NA	113050243	113053236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_+_113050200_113053200
m54284U_201013_031047/15271879/ccs	chr9	+	179	1	Intergenic	novelGene_5045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTTAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	102518385	102518564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102518400_102518600
m54284U_201013_031047/152830658/ccs	chr18	+	190	1	Intergenic	novelGene_8936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTGAAAAAACAAAATAGAA	NA	False	NA	NA	False	NA	NA	NA	42496243	42496433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_42496200_42496400
m54284U_201013_031047/152831665/ccs	chr5	+	189	1	Intergenic	novelGene_2511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGACTTTTTCTGA	6972	False	NA	NA	False	NA	NA	NA	30860800	30860989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_30860800_30861000
m54284U_201013_031047/152962414/ccs	chr11	+	192	1	Intergenic	novelGene_6472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATACCTCCTGTTTTTGCA	NA	False	NA	NA	False	NA	NA	NA	116169034	116169226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_116169000_116169200
m54284U_201013_031047/152963719/ccs	chrX	+	161	1	Intergenic	novelGene_9514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAGCAAAGGGAGAA	NA	False	NA	NA	False	NA	NA	NA	74871893	74872054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_74871900_74872100
m54284U_201013_031047/152963875/ccs	chr6	-	186	1	Intergenic	novelGene_3596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTCTCCTAACTTG	NA	False	NA	NA	False	NA	NA	NA	149050037	149049851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_149049900_149050000
m54284U_201013_031047/153029301/ccs	chr17	-	2294	1	Genic_Genomic	ENSMUSG00000057411.10_ENSMUSG00000118135.2	novel	NA	NA	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGATTCTTTTCTTTCCA	8392	False	NA	NA	False	GATAAA	-14	NA	26011347	26009053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr17_-_26009100_26011300
m54284U_201013_031047/153487900/ccs	chr1	+	174	1	Intergenic	novelGene_126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCTATACAA	NA	False	NA	NA	False	NA	NA	NA	55081216	55081390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_55081200_55081400
m54284U_201013_031047/153682890/ccs	chr16	+	197	1	Intergenic	novelGene_8319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCACGTTAGTGGACAC	NA	False	NA	NA	False	NA	NA	NA	90109213	90109410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_90109200_90109400
m54284U_201013_031047/153683537/ccs	chr3	+	195	1	Intergenic	novelGene_1405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTGGGTAAATAATCACG	NA	False	NA	NA	False	NA	NA	NA	51907322	51907517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_51907300_51907500
m54284U_201013_031047/153684225/ccs	chr8	+	216	1	Intergenic	novelGene_4526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAATGTGATAGGGG	8646	False	NA	NA	False	NA	NA	NA	117469852	117470068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_117469900_117470100
m54284U_201013_031047/153944409/ccs	chr13	-	187	1	Intergenic	novelGene_7081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	54640503	54640316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_54640300_54640500
m54284U_201013_031047/153944481/ccs	chr17	+	193	1	Antisense	novelGene_ENSMUSG00000097282.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAAATTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	71053169	71053362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_71053200_71053400
m54284U_201013_031047/153945419/ccs	chr3	+	163	1	Intergenic	novelGene_1471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAAAATACTAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	87565902	87566065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_87565900_87566100
m54284U_201013_031047/154010951/ccs	chr16	+	181	1	Intergenic	novelGene_8295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATATAGAACTCCAT	NA	False	NA	NA	False	NA	NA	NA	66532608	66532789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_66532600_66532800
m54284U_201013_031047/154075706/ccs	chr2	+	190	1	Intergenic	novelGene_1071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGACAAGGCCTCACTA	8624	False	NA	NA	False	NA	NA	NA	130676443	130676633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_130676400_130676600
m54284U_201013_031047/154206461/ccs	chr4	-	197	1	Intergenic	novelGene_2297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	9244	False	NA	NA	False	NA	NA	NA	140601342	140601145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_140601100_140601300
m54284U_201013_031047/154206536/ccs	chrX	+	218	1	Intergenic	novelGene_9411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	852	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCATGGAAGGAGTTACA	NA	False	NA	NA	False	NA	NA	NA	21338591	21338809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_21338600_21338800
m54284U_201013_031047/154274390/ccs	chr16	+	177	1	Intergenic	novelGene_8042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8550267	8550444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_8550300_8550400
m54284U_201013_031047/154337514/ccs	chr9	-	244	1	Intergenic	novelGene_4891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTTTTGTCTTTTTAT	NA	False	NA	NA	False	ATTAAA	-12	NA	65896989	65896745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65896700_65897000
m54284U_201013_031047/154339049/ccs	chr18	-	3794	1	Genic_Genomic	ENSMUSG00000024378.10	novel	NA	NA	NA	NA	10682	64	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTGGTCATTGACCTT	NA	False	NA	-16	True	AATAAA	-18	NA	33336137	33332343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr18_-_33332300_33336100
m54284U_201013_031047/154601769/ccs	chr4	+	173	1	Intergenic	novelGene_2248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAACAAAAAAATTAAAGATT	NA	False	NA	NA	False	NA	NA	NA	135617915	135618088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_135617900_135618100
m54284U_201013_031047/154797890/ccs	chr7	+	202	1	Intergenic	novelGene_3993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATTAAGAACTCAAGAAG	NA	False	NA	NA	False	NA	NA	NA	101798108	101798310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_101798100_101798300
m54284U_201013_031047/154862093/ccs	chr17	-	3299	1	NIC	ENSMUSG00000024165.10	novel	1430	6	NA	NA	16076	1208	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGATGGCTTGTGTCAGG	NA	False	NA	40	True	NA	NA	NA	25163534	25160235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25160200_25163500
m54284U_201013_031047/154993322/ccs	chr5	+	187	1	Intergenic	novelGene_2695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCACATACATTAAATAA	NA	False	NA	NA	False	NA	NA	NA	100702668	100702855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_100702700_100702900
m54284U_201013_031047/155190770/ccs	chr12	+	534	1	Intergenic	novelGene_6832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGCAATGTATCCATGC	NA	False	NA	NA	False	NA	NA	NA	91296482	91297016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_91296500_91297000
m54284U_201013_031047/155453682/ccs	chr4	+	174	1	ISM	ENSMUSG00000058006.13	ENSMUST00000138577.2	2265	3	2871	0	2871	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	2748	False	NA	NA	False	NA	NA	NA	32753441	32753615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_32753400_32753600
m54284U_201013_031047/155518765/ccs	chr2	-	230	1	Intergenic	novelGene_891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGCTAATTTCCCACAG	NA	False	NA	NA	False	TATAAA	-11	NA	83538284	83538054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_83538100_83538300
m54284U_201013_031047/155585050/ccs	chr12	+	167	1	Intergenic	novelGene_6607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAAGAGATCA	NA	False	NA	NA	False	NA	NA	NA	28737065	28737232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_28737100_28737200
m54284U_201013_031047/155780156/ccs	chrX	+	191	1	Intergenic	novelGene_9505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTAGCACCATGCCTG	NA	False	NA	NA	False	NA	NA	NA	73302762	73302953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_73302800_73303000
m54284U_201013_031047/155781475/ccs	chr19	-	179	1	Intergenic	novelGene_9343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTTTTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	53838346	53838167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_53838200_53838300
m54284U_201013_031047/155976582/ccs	chr5	+	176	1	Intergenic	novelGene_2777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAGATATAGAAC	3823	False	NA	NA	False	NA	NA	NA	113721218	113721394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_113721200_113721400
m54284U_201013_031047/15598304/ccs	chr3	+	186	1	Intergenic	novelGene_1444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGAATAAAAAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	79499982	79500168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_79500000_79500200
m54284U_201013_031047/15598584/ccs	chr15	+	188	1	Intergenic	novelGene_7689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAAACAGGTATTTA	NA	False	NA	NA	False	NA	NA	NA	38039704	38039892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_38039700_38039900
m54284U_201013_031047/156041345/ccs	chr11	-	174	1	Intergenic	novelGene_6192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTTTTTAAACC	NA	False	NA	NA	False	NA	NA	NA	88765029	88764855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88764900_88765000
m54284U_201013_031047/156109115/ccs	chr11	+	173	1	Intergenic	novelGene_6174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTTTTAAATTAGG	NA	False	NA	NA	False	NA	NA	NA	87323495	87323668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87323500_87323700
m54284U_201013_031047/156239444/ccs	chr7	+	193	1	Intergenic	novelGene_4164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACCCTTAATATCAAAT	2407	False	NA	NA	False	NA	NA	NA	140859829	140860022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140859800_140860000
m54284U_201013_031047/156502681/ccs	chr7	+	3590	3	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1147	0	multi-exon	TRUE	canonical	0	0	junction_2	2.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTTTCCGAGGTGGC	5823	False	NA	20	True	AATAAA	-17	NA	16727779	16731441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_16729668_16729715_16730052_16730075
m54284U_201013_031047/156565713/ccs	chr8	+	198	1	Intergenic	novelGene_4433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTGACTGTCCTTCTG	266	False	NA	NA	False	NA	NA	NA	105860914	105861112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_105860900_105861100
m54284U_201013_031047/156567356/ccs	chr10	+	5495	1	NIC	ENSMUSG00000025408.16	novel	890	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCACTTTTTCTTCTT	NA	False	NA	29	True	AGTAAA	-18	NA	127126662	127132157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_127126700_127132200
m54284U_201013_031047/156633667/ccs	chr2	+	173	1	Intergenic	novelGene_1019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATATCCTGTTTTGGCTTC	5906	False	NA	NA	False	NA	NA	NA	120593676	120593849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_120593700_120593800
m54284U_201013_031047/156762640/ccs	chr11	+	180	1	Intergenic	novelGene_6152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATTATAAACCATC	NA	False	NA	NA	False	NA	NA	NA	86007344	86007524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_86007300_86007500
m54284U_201013_031047/156960874/ccs	chr11	+	184	1	Intergenic	novelGene_5687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAGAATGTTGACTTT	5145	False	NA	NA	False	NA	NA	NA	6278911	6279095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_6278900_6279100
m54284U_201013_031047/156960955/ccs	chr11	-	177	1	Intergenic	novelGene_6505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCTGGTGAGATGGCTC	2220	False	NA	NA	False	NA	NA	NA	120044948	120044771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_120044800_120044900
m54284U_201013_031047/157155625/ccs	chr13	+	337	1	Intergenic	novelGene_7252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATAATAATTAAAAATAATG	NA	False	NA	NA	False	ATTAAA	-6	NA	96824182	96824519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_96824200_96824500
m54284U_201013_031047/157221512/ccs	chr13	-	177	1	Intergenic	novelGene_7186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATTCTCAACTGT	NA	False	NA	NA	False	NA	NA	NA	67322307	67322130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_67322100_67322300
m54284U_201013_031047/157485103/ccs	chr11	-	152	1	Intergenic	novelGene_5937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	68911693	68911541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68911500_68911700
m54284U_201013_031047/157548661/ccs	chrX	+	176	1	Intergenic	novelGene_9512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAGTATGCACATT	1584	False	NA	NA	False	NA	NA	NA	74308773	74308949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_74308800_74308900
m54284U_201013_031047/1575660/ccs	chr14	+	318	1	Intergenic	novelGene_7602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAAAATTTAAGATTTCAA	NA	False	NA	NA	False	NA	NA	NA	121740707	121741025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_121740700_121741000
m54284U_201013_031047/157615772/ccs	chr4	-	164	1	Intergenic	novelGene_2423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTTTTAAAAACATGATT	3895	False	NA	NA	False	NA	NA	NA	155341852	155341688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155341700_155341900
m54284U_201013_031047/157942410/ccs	chr11	+	194	1	Intergenic	novelGene_6002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATGATGTCTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	75164900	75165094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75164900_75165100
m54284U_201013_031047/158008999/ccs	chr2	+	159	1	Intergenic	novelGene_1194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	NA	False	NA	NA	False	NA	NA	NA	157493534	157493693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_157493500_157493700
m54284U_201013_031047/158139080/ccs	chr11	+	4926	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	27.3737381455737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGTGGATCCATGAA	NA	False	NA	15	True	ATTAAA	-23	NA	115656258	115689859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677005_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
m54284U_201013_031047/158269645/ccs	chr10	+	181	1	Intergenic	novelGene_5221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	20753686	20753867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_20753700_20753900
m54284U_201013_031047/158271004/ccs	chrX	-	4065	6	NIC	ENSMUSG00000045180.14	novel	6997	10	NA	NA	62	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	25.3566559309385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151427477	151392987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406314_151427389
m54284U_201013_031047/158468788/ccs	chr11	+	164	1	Intergenic	novelGene_6301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	98286417	98286581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98286400_98286600
m54284U_201013_031047/15860416/ccs	chr6	-	218	1	Intergenic	novelGene_3229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCTCTCCCTTTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	39562055	39561837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39561800_39562100
m54284U_201013_031047/158861948/ccs	chr8	+	182	1	Intergenic	novelGene_4445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	717	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAAGTCAACTG	NA	False	NA	NA	False	NA	NA	NA	106530967	106531149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106531000_106531100
m54284U_201013_031047/158925227/ccs	chr12	+	158	1	Intergenic	novelGene_6864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	104835838	104835996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_104835800_104836000
m54284U_201013_031047/158926121/ccs	chr6	+	175	1	Intergenic	novelGene_3246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAGTAGATTTAAT	NA	False	NA	NA	False	NA	NA	NA	47583922	47584097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_47583900_47584100
m54284U_201013_031047/158990952/ccs	chr11	+	179	1	Intergenic	novelGene_6258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTAGCATCATAT	7746	False	NA	NA	False	NA	NA	NA	96785598	96785777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_96785600_96785800
m54284U_201013_031047/159252894/ccs	chr4	+	172	1	Genic_Intron	novelGene_2352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATCTTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	147187302	147187474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Intron_chr4_+_147187300_147187500
m54284U_201013_031047/15928122/ccs	chr8	+	184	1	Intergenic	novelGene_4289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATTCGCATCAAATCTA	NA	False	NA	NA	False	NA	NA	NA	47198024	47198208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_47198000_47198200
m54284U_201013_031047/159319294/ccs	chr1	+	184	1	Intergenic	novelGene_334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTAAAAACATTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	135103656	135103840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_135103700_135103800
m54284U_201013_031047/159515777/ccs	chr5	+	183	1	Intergenic	novelGene_2688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATTGTTTGTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	98345303	98345486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_98345300_98345500
m54284U_201013_031047/159516520/ccs	chr12	+	173	1	Intergenic	novelGene_6682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	69349603	69349776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_69349600_69349800
m54284U_201013_031047/159581416/ccs	chr16	-	168	1	Intergenic	novelGene_8070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2503	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTTTAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	13544030	13543862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_13543900_13544000
m54284U_201013_031047/159712418/ccs	chr1	-	192	1	Intergenic	novelGene_486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAAAGAGAATCT	4430	False	NA	NA	False	NA	NA	NA	172293568	172293376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_172293400_172293600
m54284U_201013_031047/159712437/ccs	chr16	-	194	1	Intergenic	novelGene_8316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTGAACAATAACGATAC	NA	False	NA	NA	False	NA	NA	NA	90094038	90093844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_90093800_90094000
m54284U_201013_031047/160041463/ccs	chr7	+	3481	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	0	intron_retention	FALSE	canonical	3	3333	junction_5	363.860367261818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758305	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201013_031047/160301183/ccs	chr4	-	1275	1	FSM	ENSMUSG00000095937.2	ENSMUST00000119978.2	1002	1	-71	-202	-71	202	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAGAATAATCTAATA	NA	False	NA	NA	False	AATAAA	-36	NA	91740977	91739702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_91739700_91741000
m54284U_201013_031047/160303250/ccs	chr17	-	111	1	Intergenic	novelGene_8622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAAAGAGTTATCCT	NA	False	NA	NA	False	NA	NA	NA	47104018	47103907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_47103900_47104000
m54284U_201013_031047/160433599/ccs	chr11	-	231	1	Intergenic	novelGene_6475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAGAAGAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	116395040	116394809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116394800_116395000
m54284U_201013_031047/160434265/ccs	chr14	-	2549	8	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-117	0	intron_retention	FALSE	canonical	2	77	junction_7	1078.12846154428	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63746322	63729795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737762_63746158
m54284U_201013_031047/160631543/ccs	chr8	-	152	1	Intergenic	novelGene_4406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATTGTTCACA	NA	False	NA	NA	False	NA	NA	NA	92880779	92880627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_92880600_92880800
m54284U_201013_031047/160957811/ccs	chr9	+	240	1	Intergenic	novelGene_4962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATAATCTTGATATTTAT	NA	False	NA	NA	False	NA	NA	NA	77975250	77975490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_77975200_77975500
m54284U_201013_031047/161022550/ccs	chr11	+	172	1	Intergenic	novelGene_5975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAAAGAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	72497061	72497233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_72497100_72497200
m54284U_201013_031047/161023014/ccs	chr8	-	156	1	Intergenic	novelGene_4429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAATTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	105143313	105143157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_105143200_105143300
m54284U_201013_031047/161087540/ccs	chr17	-	194	1	Intergenic	novelGene_8511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTAGTCAAGTTGTGAT	9148	False	NA	NA	False	NA	NA	NA	31861884	31861690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_31861700_31861900
m54284U_201013_031047/161284941/ccs	chr10	+	2028	1	NIC	ENSMUSG00000019842.7	novel	2867	9	NA	NA	12609	-18188	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTAAAAAAGAAATGCAAA	NA	False	NA	NA	False	NA	NA	NA	39501538	39503566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_39501500_39503600
m54284U_201013_031047/161548260/ccs	chr11	+	185	1	Intergenic	novelGene_5667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGGGCTCACGTAGCCT	NA	False	NA	NA	False	NA	NA	NA	4627778	4627963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4627800_4628000
m54284U_201013_031047/161874565/ccs	chr10	+	189	1	Intergenic	novelGene_5451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTTAAGGAGATGGTT	NA	False	NA	NA	False	NA	NA	NA	80578950	80579139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80579000_80579100
m54284U_201013_031047/162007299/ccs	chr15	+	231	1	Intergenic	novelGene_7864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCAAAACACCAACGAAGT	NA	False	NA	NA	False	NA	NA	NA	82763264	82763495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_82763300_82763500
m54284U_201013_031047/162137518/ccs	chr9	+	185	1	Intergenic	novelGene_5008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGAAATTGGTCTACT	NA	False	NA	NA	False	NA	NA	NA	96073067	96073252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96073100_96073300
m54284U_201013_031047/162464862/ccs	chr4	+	177	1	Intergenic	novelGene_1778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGTCACCGACCT	NA	False	NA	NA	False	NA	NA	NA	32572572	32572749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_32572600_32572700
m54284U_201013_031047/16253022/ccs	chr16	+	185	1	Intergenic	novelGene_8177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCCAGATAGGGGTTT	NA	False	NA	NA	False	NA	NA	NA	29800762	29800947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_29800800_29800900
m54284U_201013_031047/162989686/ccs	chr9	+	204	1	Intergenic	novelGene_4838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAGAAAAATAGG	NA	False	NA	NA	False	NA	NA	NA	61781193	61781397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_61781200_61781400
m54284U_201013_031047/163056373/ccs	chr12	+	176	1	Intergenic	novelGene_6941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGTAGGCAT	NA	False	NA	NA	False	NA	NA	NA	117406227	117406403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_117406200_117406400
m54284U_201013_031047/163119326/ccs	chr2	+	170	1	Intergenic	novelGene_579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAATCGAGT	757	False	NA	17	True	NA	NA	NA	5952335	5952505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_5952300_5952500
m54284U_201013_031047/163119650/ccs	chr11	+	188	1	Intergenic	novelGene_5702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAATAGATCCC	NA	False	NA	NA	False	NA	NA	NA	12373885	12374073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_12373900_12374100
m54284U_201013_031047/163121175/ccs	chr1	+	185	1	Intergenic	novelGene_555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTTTGTATTAGACCCA	3902	False	NA	NA	False	NA	NA	NA	191285401	191285586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_191285400_191285600
m54284U_201013_031047/16318866/ccs	chr18	+	144	1	Intergenic	novelGene_8927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAGAACAAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	38775068	38775212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_38775100_38775200
m54284U_201013_031047/16320659/ccs	chr11	-	197	1	Intergenic	novelGene_5675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCTGCACATGTGT	NA	False	NA	NA	False	NA	NA	NA	4853683	4853486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_4853500_4853700
m54284U_201013_031047/163447142/ccs	chr5	+	193	1	Intergenic	novelGene_2907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTATAGCACCATGCCCA	NA	False	NA	NA	False	NA	NA	NA	124677686	124677879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_124677700_124677900
m54284U_201013_031047/163448822/ccs	chr8	+	187	1	Intergenic	novelGene_4240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGTATATCATTAGAATA	NA	False	NA	NA	False	NA	NA	NA	26246190	26246377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_26246200_26246400
m54284U_201013_031047/163580003/ccs	chr12	+	161	1	Intergenic	novelGene_6635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGTCTTTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52642664	52642825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_52642700_52642800
m54284U_201013_031047/163645178/ccs	chr1	+	194	1	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGGGCCATCTCTCCAA	NA	False	NA	NA	False	NA	NA	NA	6156716	6156910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_6156700_6156900
m54284U_201013_031047/16385447/ccs	chr19	+	195	1	Intergenic	novelGene_9265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCAAAGCAGCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	42003866	42004061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_42003900_42004100
m54284U_201013_031047/163972732/ccs	chr17	+	192	1	Intergenic	novelGene_8441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAACACAGCCCTTGAGTC	NA	False	NA	NA	False	NA	NA	NA	27140985	27141177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27141000_27141200
m54284U_201013_031047/163973320/ccs	chr19	-	175	1	Intergenic	novelGene_9173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGACTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	20184494	20184319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_20184300_20184500
m54284U_201013_031047/164234469/ccs	chr17	+	183	1	Intergenic	novelGene_8658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	56944015	56944198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_56944000_56944200
m54284U_201013_031047/164301365/ccs	chr3	-	177	1	Intergenic	novelGene_1366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTTGTTTTAAAAGC	1904	False	NA	-6	True	NA	NA	NA	27256818	27256641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_27256600_27256800
m54284U_201013_031047/164430637/ccs	chr2	+	172	1	Intergenic	novelGene_1042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATGAGAACCATATGTC	NA	False	NA	NA	False	NA	NA	NA	123205900	123206072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_123205900_123206100
m54284U_201013_031047/164825067/ccs	chr3	+	175	1	Intergenic	novelGene_1600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102908741	102908916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_102908700_102908900
m54284U_201013_031047/165020907/ccs	chr17	+	177	1	Intergenic	novelGene_8694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATGTAGGTTTCC	NA	False	NA	NA	False	NA	NA	NA	69620274	69620451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_69620300_69620500
m54284U_201013_031047/165085385/ccs	chr10	+	181	1	Intergenic	novelGene_5464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTCTTGAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	81091949	81092130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_81091900_81092100
m54284U_201013_031047/165544966/ccs	chr2	+	193	1	Intergenic	novelGene_732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCTTCTGAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	33295532	33295725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33295500_33295700
m54284U_201013_031047/165545783/ccs	chr17	+	178	1	Intergenic	novelGene_8626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGACACGGCTTTA	3656	False	NA	NA	False	NA	NA	NA	47472013	47472191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47472000_47472200
m54284U_201013_031047/165546157/ccs	chr14	+	185	1	Intergenic	novelGene_7422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATTCTTTAGTCTGCTA	NA	False	NA	NA	False	NA	NA	NA	47802490	47802675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_47802500_47802700
m54284U_201013_031047/166002810/ccs	chr5	+	177	1	Intergenic	novelGene_2618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGAAACTATTAAAA	4343	False	NA	NA	False	NA	NA	NA	73636678	73636855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_73636700_73636900
m54284U_201013_031047/166068307/ccs	chr15	+	2787	1	Antisense	novelGene_ENSMUSG00000022387.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCACTGTGTATGTAC	NA	False	NA	NA	False	NA	NA	NA	88571969	88574756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_+_88572000_88574800
m54284U_201013_031047/166070445/ccs	chr19	-	201	1	Intergenic	novelGene_9206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATTGTGGACCAGCCA	NA	False	NA	NA	False	NA	NA	NA	29655118	29654917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_29654900_29655100
m54284U_201013_031047/166070689/ccs	chr12	+	251	1	Intergenic	novelGene_6618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGAGGAATCCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	31850676	31850927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_31850700_31850900
m54284U_201013_031047/166135485/ccs	chr16	-	224	1	Intergenic	novelGene_8034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGCCCAGATAACCT	2988	False	NA	NA	False	NA	NA	NA	4766744	4766520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_4766500_4766700
m54284U_201013_031047/166201552/ccs	chr7	+	179	1	Intergenic	novelGene_3812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAACTGTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	42393013	42393192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_42393000_42393200
m54284U_201013_031047/166396767/ccs	chr5	+	166	1	Intergenic	novelGene_2706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGAGTTATG	NA	False	NA	NA	False	NA	NA	NA	103733925	103734091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_103733900_103734100
m54284U_201013_031047/16647340/ccs	chr11	+	207	1	Intergenic	novelGene_5707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCCGGCAGAATAGCT	NA	False	NA	NA	False	NA	NA	NA	17899567	17899774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_17899600_17899800
m54284U_201013_031047/166987810/ccs	chr1	+	153	1	Intergenic	novelGene_484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	172253544	172253697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_172253500_172253700
m54284U_201013_031047/167052573/ccs	chr13	-	194	1	Intergenic	novelGene_7320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGGCCCTCTGTAGC	1571	False	NA	NA	False	NA	NA	NA	114605530	114605336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_114605300_114605500
m54284U_201013_031047/167379652/ccs	chr18	-	200	1	Intergenic	novelGene_9019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACATGTTCCCAATCCT	NA	False	NA	NA	False	NA	NA	NA	75156092	75155892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_75155900_75156100
m54284U_201013_031047/167446282/ccs	chr13	+	158	1	Intergenic	novelGene_7027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	38858688	38858846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_38858700_38858800
m54284U_201013_031047/167511395/ccs	chr11	-	198	1	Intergenic	novelGene_6266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGGCACTTTGCTTTT	8359	False	NA	NA	False	AATAAA	-3	NA	97106970	97106772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97106800_97107000
m54284U_201013_031047/167577099/ccs	chr8	+	187	1	Intergenic	novelGene_4295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCACATCAGCATCTTGAT	NA	False	NA	NA	False	NA	NA	NA	49166775	49166962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_49166800_49167000
m54284U_201013_031047/167772798/ccs	chr7	+	283	1	Intergenic	novelGene_3807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAAAACACATCCAAACA	NA	False	NA	NA	False	NA	NA	NA	41597665	41597948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_41597700_41597900
m54284U_201013_031047/167840185/ccs	chr4	+	196	1	Intergenic	novelGene_1761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCAGTTGATAGGCATG	NA	False	NA	NA	False	NA	NA	NA	18619881	18620077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_18619900_18620100
m54284U_201013_031047/167904076/ccs	chr7	+	232	1	Intergenic	novelGene_3744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAACAAAACAAGTT	NA	False	NA	NA	False	NA	NA	NA	28346999	28347231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28347000_28347200
m54284U_201013_031047/167905473/ccs	chr11	+	168	1	Intergenic	novelGene_5710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTGTTTTTCGAGA	NA	False	NA	NA	False	NA	NA	NA	19859742	19859910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_19859700_19859900
m54284U_201013_031047/167969127/ccs	chr13	+	183	1	Intergenic	novelGene_7065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGGCTCGGTTGCCA	NA	False	NA	NA	False	NA	NA	NA	51219011	51219194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_51219000_51219200
m54284U_201013_031047/168100008/ccs	chr9	-	173	1	Antisense	novelGene_ENSMUSG00000037674.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	72512473	72512300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_72512300_72512500
m54284U_201013_031047/168101782/ccs	chr15	+	197	1	Intergenic	novelGene_8014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTCAGTGATGACCC	NA	False	NA	NA	False	NA	NA	NA	102560616	102560813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_102560600_102560800
m54284U_201013_031047/168297922/ccs	chrX	+	489	3	NNC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	3852.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTAGGCTTTGTTTTTTTC	NA	False	NA	12	True	AATAAA	-24	NA	105059321	105065564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_105059477_105063184_105063310_105065355
m54284U_201013_031047/168362706/ccs	chr4	+	202	1	Intergenic	novelGene_1939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATGTATCTTTTCTTAA	6344	False	NA	NA	False	NA	NA	NA	98672186	98672388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_98672200_98672400
m54284U_201013_031047/168560523/ccs	chr18	-	176	1	Intergenic	novelGene_9028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	77118457	77118281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77118300_77118500
m54284U_201013_031047/168689743/ccs	chr6	-	222	1	Intergenic	novelGene_3282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGTCTGCGGAGGTA	NA	False	NA	NA	False	NA	NA	NA	54394582	54394360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_54394400_54394600
m54284U_201013_031047/168755675/ccs	chr11	-	178	1	Intergenic	novelGene_6179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGGTTTTT	7443	False	NA	-4	True	NA	NA	NA	87397044	87396866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87396900_87397000
m54284U_201013_031047/168823300/ccs	chr4	+	197	1	Intergenic	novelGene_2258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTGGCAAAAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	136116349	136116546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_136116300_136116500
m54284U_201013_031047/169019435/ccs	chr4	+	190	1	Intergenic	novelGene_2197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTCTATGATTTAAAA	2394	False	NA	NA	False	NA	NA	NA	132354166	132354356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132354200_132354400
m54284U_201013_031047/169019654/ccs	chr15	+	2000	1	NIC	ENSMUSG00000045665.6	novel	1754	2	NA	NA	301	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTCTCCTGTACCCA	NA	False	NA	27	True	AATAAA	-23	NA	102188189	102190189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102188200_102190200
m54284U_201013_031047/16911109/ccs	chr3	+	196	1	FSM	ENSMUSG00000042390.10	ENSMUST00000205797.2	2443	1	1897	350	1270	-350	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAGAAAAAAAAGACTA	1213	False	NA	NA	False	NA	NA	NA	90250232	90250428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_90250200_90250400
m54284U_201013_031047/169214317/ccs	chr3	+	182	1	Intergenic	novelGene_1426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTTGAAAAATAAGGAAAA	8622	False	NA	NA	False	NA	NA	NA	67438764	67438946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_67438800_67438900
m54284U_201013_031047/169413000/ccs	chr15	+	197	1	Intergenic	novelGene_7661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATGGTGGAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	27184095	27184292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_27184100_27184300
m54284U_201013_031047/169675191/ccs	chr13	-	199	1	Intergenic	novelGene_7105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATCAGGAATGATGG	NA	False	NA	NA	False	NA	NA	NA	55543285	55543086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55543100_55543300
m54284U_201013_031047/169675452/ccs	chr11	+	177	1	Intergenic	novelGene_5751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGACTTAA	NA	False	NA	NA	False	NA	NA	NA	24797305	24797482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_24797300_24797500
m54284U_201013_031047/169739818/ccs	chr11	-	160	1	Intergenic	novelGene_5692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAAGTTCCAATTG	NA	False	NA	NA	False	NA	NA	NA	6379803	6379643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_6379600_6379800
m54284U_201013_031047/16976500/ccs	chr2	+	190	1	Intergenic	novelGene_1094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTACTGAAGCTGTACT	NA	False	NA	NA	False	NA	NA	NA	142697613	142697803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_142697600_142697800
m54284U_201013_031047/169804063/ccs	chr7	-	2652	10	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_5	253.8978116594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5440	False	NA	-10	True	AATAAA	-13	NA	44519212	44512492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44512869_44512958_44514094_44514185_44514260_44514336_44514427_44514895_44515048_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
m54284U_201013_031047/170067068/ccs	chr10	+	184	1	Intergenic	novelGene_5255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAACAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	34872574	34872758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_34872600_34872800
m54284U_201013_031047/170134019/ccs	chr17	+	175	1	Intergenic	novelGene_8443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	6962	False	NA	NA	False	NA	NA	NA	27210305	27210480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27210300_27210500
m54284U_201013_031047/170263954/ccs	chr5	+	175	1	Intergenic	novelGene_2481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGAAAAGAAAA	2118	False	NA	NA	False	NA	NA	NA	23678239	23678414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_23678200_23678400
m54284U_201013_031047/17041916/ccs	chr1	+	226	1	Intergenic	novelGene_434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTCTTGAATGTGTTC	NA	False	NA	NA	False	NA	NA	NA	161024169	161024395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_161024200_161024400
m54284U_201013_031047/170461636/ccs	chr19	+	188	1	Intergenic	novelGene_9067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAATGAAATTAATGGGA	NA	False	NA	NA	False	NA	NA	NA	3756099	3756287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3756100_3756300
m54284U_201013_031047/170592805/ccs	chr11	-	219	1	Intergenic	novelGene_5973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	341	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAAGGGGGTTTCTTT	2079	False	NA	NA	False	NA	NA	NA	72487887	72487668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_72487700_72487900
m54284U_201013_031047/170724089/ccs	chr3	+	182	1	Intergenic	novelGene_1525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCATACACATAAGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	89749824	89750006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89749800_89750000
m54284U_201013_031047/171049204/ccs	chr6	-	1960	4	NNC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	74	0	intron_retention	FALSE	canonical	3	28	junction_2	474.370694241914	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8570	False	NA	NA	False	TATAAA	-15	NA	72339253	72336696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_72337618_72337857_72337933_72338104_72338210_72338394
m54284U_201013_031047/171051705/ccs	chr17	+	230	1	Intergenic	novelGene_8735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGGAAAACTGGGTGTA	NA	False	NA	NA	False	TTTAAA	-11	NA	80084333	80084563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_80084300_80084600
m54284U_201013_031047/171376908/ccs	chr6	+	1900	1	Intergenic	novelGene_3402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	97099370	97101270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_97099400_97101300
m54284U_201013_031047/171509613/ccs	chr1	+	185	1	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATTTTTGCTATCTTA	NA	False	NA	NA	False	NA	NA	NA	9321224	9321409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_9321200_9321400
m54284U_201013_031047/171575178/ccs	chr3	+	156	1	FSM	ENSMUSG00000105509.2	ENSMUST00000197569.2	3692	1	1577	1959	1577	-1959	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCACTCGGTTCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	110158907	110159063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_110158900_110159100
m54284U_201013_031047/171770485/ccs	chr11	+	179	1	Intergenic	novelGene_6508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTTAATTCCTGATCC	1750	False	NA	8	True	NA	NA	NA	120235701	120235880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120235700_120235900
m54284U_201013_031047/171771276/ccs	chr14	+	198	1	Intergenic	novelGene_7575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTAGTCAGGGTTTCTAT	1027	False	NA	NA	False	NA	NA	NA	99299994	99300192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_99300000_99300200
m54284U_201013_031047/171902018/ccs	chr3	+	175	1	Intergenic	novelGene_1623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTCTTTCTCA	NA	False	NA	NA	False	NA	NA	NA	107721508	107721683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_107721500_107721700
m54284U_201013_031047/171966717/ccs	chr14	-	1448	7	NIC	ENSMUSG00000067995.5	novel	1467	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	207.983706626799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGATGGCAACTGTTATC	NA	False	NA	-17	True	AATAAA	-19	NA	76248305	76134376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76245144_76245219_76248119
m54284U_201013_031047/172034619/ccs	chr19	+	2846	1	Antisense	novelGene_ENSMUSG00000024640.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAAGGAACAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	15894731	15897577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_+_15894700_15897600
m54284U_201013_031047/172427409/ccs	chr15	-	175	1	Intergenic	novelGene_7754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGAAAAGATGCA	NA	False	NA	NA	False	NA	NA	NA	73316517	73316342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_73316300_73316500
m54284U_201013_031047/172755312/ccs	chr2	+	156	1	Intergenic	novelGene_1022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAGATTCAC	NA	False	NA	NA	False	NA	NA	NA	120881743	120881899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_120881700_120881900
m54284U_201013_031047/172755613/ccs	chr15	+	186	1	Intergenic	novelGene_7854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGAGATTTAAA	6597	False	NA	NA	False	NA	NA	NA	81842490	81842676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81842500_81842700
m54284U_201013_031047/172819477/ccs	chr17	+	170	1	Intergenic	novelGene_8612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAATAGAAAATTT	NA	False	NA	NA	False	NA	NA	NA	46466177	46466347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_46466200_46466300
m54284U_201013_031047/173017515/ccs	chr2	+	183	1	Intergenic	novelGene_1224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATGGAGACTTCTAGA	NA	False	NA	NA	False	NA	NA	NA	165546168	165546351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_165546200_165546400
m54284U_201013_031047/17301828/ccs	chr9	+	169	1	Intergenic	novelGene_5161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAGAACAAACA	NA	False	NA	NA	False	NA	NA	NA	122597554	122597723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_122597600_122597700
m54284U_201013_031047/17302860/ccs	chr6	+	6235	28	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_6	74.3141664561799	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185006	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195624_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201013_031047/173146571/ccs	chr11	+	192	1	Intergenic	novelGene_6451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCCAGCTCCCTCAGG	5744	False	NA	NA	False	NA	NA	NA	115400383	115400575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115400400_115400600
m54284U_201013_031047/173213686/ccs	chr9	+	189	1	Intergenic	novelGene_5047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAACAAAATGATCTTAA	NA	False	NA	NA	False	NA	NA	NA	102677027	102677216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102677000_102677200
m54284U_201013_031047/173279358/ccs	chr11	+	202	1	Intergenic	novelGene_6296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGTGTGCCACCACTGCCA	NA	False	NA	NA	False	NA	NA	NA	98077633	98077835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98077600_98077800
m54284U_201013_031047/173342908/ccs	chr15	-	174	1	Intergenic	novelGene_7937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTATACCGGGAAAAGG	9068	False	NA	NA	False	NA	NA	NA	98473712	98473538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98473500_98473700
m54284U_201013_031047/173344012/ccs	chr12	-	207	1	Intergenic	novelGene_6574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGGAGAAGCCCTTGGG	2729	False	NA	NA	False	NA	NA	NA	17345667	17345460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_17345500_17345700
m54284U_201013_031047/173605913/ccs	chr11	+	184	1	Intergenic	novelGene_5955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGTAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	69821622	69821806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69821600_69821800
m54284U_201013_031047/173671350/ccs	chr15	-	196	1	Intergenic	novelGene_7866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTAAATTCTTAAGATCAG	NA	False	NA	NA	False	NA	NA	NA	83009745	83009549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_83009500_83009700
m54284U_201013_031047/17369470/ccs	chr9	+	193	1	Intergenic	novelGene_4821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTAGAAAGTATTTTGA	NA	False	NA	NA	False	NA	NA	NA	59118368	59118561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59118400_59118600
m54284U_201013_031047/173868880/ccs	chr11	+	181	1	Intergenic	novelGene_6261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTGATTTTATATCAT	NA	False	NA	NA	False	NA	NA	NA	97007436	97007617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97007400_97007600
m54284U_201013_031047/174129284/ccs	chr12	+	190	1	Intergenic	novelGene_6816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCTTTCTTCCTGAGCAA	NA	False	NA	NA	False	NA	NA	NA	85790954	85791144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_85791000_85791100
m54284U_201013_031047/174130608/ccs	chr12	+	173	1	Intergenic	novelGene_6927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTCACT	NA	False	NA	NA	False	NA	NA	NA	111689718	111689891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111689700_111689900
m54284U_201013_031047/174195251/ccs	chr5	+	2108	1	Genic_Genomic	ENSMUSG00000029404.16	novel	NA	NA	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254151	124256259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_+_124254200_124256300
m54284U_201013_031047/174327474/ccs	chr8	-	5195	9	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	0	1344	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	130.672718556706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCCTTCCCAACTAGGA	NA	False	NA	-31	True	AATAAA	-17	NA	96215455	96176020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96214192_96214305_96215030
m54284U_201013_031047/174523299/ccs	chr9	-	211	1	Intergenic	novelGene_5030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTAGATAGGACTGGTT	NA	False	NA	NA	False	NA	NA	NA	99165150	99164939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_99164900_99165200
m54284U_201013_031047/174524324/ccs	chrX	-	237	1	Intergenic	novelGene_9469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCAGTGAGCCCTTCAGG	NA	False	NA	NA	False	NA	NA	NA	55785360	55785123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_55785100_55785400
m54284U_201013_031047/174653979/ccs	chr1	+	176	1	Intergenic	novelGene_388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	153393489	153393665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_153393500_153393700
m54284U_201013_031047/174654410/ccs	chr6	-	188	1	Intergenic	novelGene_3221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCAGAGCCATTCTTAC	NA	False	NA	NA	False	NA	NA	NA	39384922	39384734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39384700_39384900
m54284U_201013_031047/174655295/ccs	chr10	+	155	1	Intergenic	novelGene_5176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	4295443	4295598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_4295400_4295600
m54284U_201013_031047/174785719/ccs	chr16	-	181	1	Intergenic	novelGene_8220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGGTTCCAGGTTTAAG	NA	False	NA	NA	False	NA	NA	NA	32593091	32592910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32592900_32593100
m54284U_201013_031047/174785887/ccs	chr2	+	177	1	Intergenic	novelGene_613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATTCCTCAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	19444200	19444377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_19444200_19444400
m54284U_201013_031047/174851967/ccs	chrX	+	202	1	Intergenic	novelGene_9647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTAGCTTCTTCTTCT	NA	False	NA	NA	False	NA	NA	NA	139410454	139410656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_139410500_139410700
m54284U_201013_031047/17498178/ccs	chr2	+	185	1	Intergenic	novelGene_901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATACAATTTAAATAATAA	6839	False	NA	NA	False	NA	NA	NA	84532312	84532497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_84532300_84532500
m54284U_201013_031047/17498494/ccs	chr9	+	3866	1	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	0	1912	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70450075	70453941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_70450100_70453900
m54284U_201013_031047/175114655/ccs	chrX	+	177	1	Intergenic	novelGene_9629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	130781352	130781529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_130781400_130781500
m54284U_201013_031047/175243743/ccs	chr2	+	222	1	Intergenic	novelGene_842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAACAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70244127	70244349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_70244100_70244300
m54284U_201013_031047/175309423/ccs	chr15	-	178	1	Intergenic	novelGene_8021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCACC	9349	False	NA	NA	False	NA	NA	NA	103314181	103314003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_103314000_103314200
m54284U_201013_031047/175636582/ccs	chr16	+	6340	8	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	0	intron_retention	TRUE	canonical	3	75	junction_2	1403.74456947357	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATGTCTGGTAATATT	NA	False	NA	32	True	ACTAAA	-32	NA	84571010	84619918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_84571442_84598457_84598527_84603724_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84618191_84619674
m54284U_201013_031047/175833969/ccs	chr1	+	208	1	Intergenic	novelGene_525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGTTGTGTAGTTAG	NA	False	NA	NA	False	AATACA	-18	NA	181745452	181745660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_181745500_181745700
m54284U_201013_031047/175965836/ccs	chr7	+	175	1	Intergenic	novelGene_3630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTATGCACACTCACC	NA	False	NA	NA	False	NA	NA	NA	4689650	4689825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_4689600_4689800
m54284U_201013_031047/176031871/ccs	chrX	+	1710	1	Intergenic	novelGene_9454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48165639	48167349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_48165600_48167300
m54284U_201013_031047/176227572/ccs	chr6	+	375	1	Intergenic	novelGene_3454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCACAAGAGAAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	120204671	120205046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120204700_120205000
m54284U_201013_031047/176555988/ccs	chr4	+	185	1	Intergenic	novelGene_1763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGCCATGTAAGGGAT	NA	False	NA	NA	False	NA	NA	NA	21693916	21694101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_21693900_21694100
m54284U_201013_031047/176816321/ccs	chr1	+	1788	1	FSM	ENSMUSG00000101188.2	ENSMUST00000122226.2	1218	1	0	-570	0	570	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTAAAGTGCTTAGATG	NA	False	NA	121	True	AATAAA	-42	NA	60743090	60744878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_60743100_60744900
m54284U_201013_031047/176816467/ccs	chr15	+	3409	13	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	0	307	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	121.303567777521	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	6	True	NA	3	True	AATAAA	-23	NA	9071339	9110255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9098897_9098964_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108308
m54284U_201013_031047/176817643/ccs	chr3	+	170	1	Intergenic	novelGene_1635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAACCCTCAGCCAATG	NA	False	NA	NA	False	NA	NA	NA	108836224	108836394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_108836200_108836400
m54284U_201013_031047/17695017/ccs	chr7	+	211	1	Intergenic	novelGene_4101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATAAAGATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127107781	127107992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_127107800_127108000
m54284U_201013_031047/17695633/ccs	chr8	+	191	1	Intergenic	novelGene_4315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAAGTTTTTTGTTGTTGT	7225	False	NA	NA	False	NA	NA	NA	70384039	70384230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_70384000_70384200
m54284U_201013_031047/177012839/ccs	chr12	-	190	1	Intergenic	novelGene_6717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAGGTACAGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	73184884	73184694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_73184700_73184900
m54284U_201013_031047/1771509/ccs	chr6	+	236	1	Intergenic	novelGene_3269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTGTCCCCAGTGGGT	NA	False	NA	NA	False	NA	NA	NA	51498869	51499105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_51498900_51499100
m54284U_201013_031047/177211971/ccs	chr16	-	173	1	Intergenic	novelGene_8030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGCTGTGTGAGGC	NA	False	NA	NA	False	NA	NA	NA	4380164	4379991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_4380000_4380200
m54284U_201013_031047/177342479/ccs	chr7	+	187	1	Intergenic	novelGene_3839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGCACAAAAGAGGCCC	NA	False	NA	NA	False	NA	NA	NA	45119151	45119338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_45119200_45119300
m54284U_201013_031047/177408136/ccs	chr18	-	172	1	Intergenic	novelGene_9009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATGAGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	71058961	71058789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_71058800_71059000
m54284U_201013_031047/177866966/ccs	chr8	-	178	1	Intergenic	novelGene_4525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAGCAAGTCTTAAAACCC	NA	False	NA	NA	False	NA	NA	NA	117379270	117379092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_117379100_117379300
m54284U_201013_031047/178587772/ccs	chr6	+	8119	1	Intergenic	novelGene_3414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100255167	100263286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_100255200_100263300
m54284U_201013_031047/179046505/ccs	chr3	+	165	1	Intergenic	novelGene_1397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTAAAGGTATAAACA	NA	False	NA	NA	False	NA	NA	NA	51307421	51307586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_51307400_51307600
m54284U_201013_031047/179177752/ccs	chr4	+	167	1	Intergenic	novelGene_2224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAATTGAAAAAAGAGTC	NA	False	NA	NA	False	NA	NA	NA	133552196	133552363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133552200_133552400
m54284U_201013_031047/179242661/ccs	chr16	-	181	1	Intergenic	novelGene_8203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAAGCTGAA	NA	False	NA	NA	False	NA	NA	NA	31910341	31910160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31910200_31910300
m54284U_201013_031047/179374797/ccs	chr14	+	189	1	Intergenic	novelGene_7397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCATCCAGATTTCTACA	NA	False	NA	NA	False	NA	NA	NA	34439789	34439978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_34439800_34440000
m54284U_201013_031047/17957717/ccs	chr1	-	2147	1	FSM	ENSMUSG00000093178.3	ENSMUST00000175437.3	87	1	-1622	-438	-1622	438	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCTGTGGGCAGTAATT	NA	False	NA	-15	True	AATAAA	-12	NA	10014396	10012249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_10012200_10014400
m54284U_201013_031047/179832885/ccs	chr2	+	199	1	Intergenic	novelGene_744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTGATACAGATTTAA	NA	False	NA	NA	False	NA	NA	NA	34191149	34191348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34191100_34191300
m54284U_201013_031047/179896903/ccs	chr12	+	185	1	Intergenic	novelGene_6791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATCAAAATTTGAAATCC	NA	False	NA	NA	False	NA	NA	NA	83896065	83896250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_83896100_83896200
m54284U_201013_031047/180027611/ccs	chr17	+	201	1	Intergenic	novelGene_8419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAAGTGGGCCCTGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	24959550	24959751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_24959600_24959800
m54284U_201013_031047/180094442/ccs	chr3	-	207	1	Intergenic	novelGene_1664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTATTTCTTCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	122184586	122184379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_122184400_122184600
m54284U_201013_031047/180159252/ccs	chr9	+	181	1	Intergenic	novelGene_4994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTTCTAGGAGGAAC	9408	False	NA	NA	False	NA	NA	NA	88966438	88966619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_88966400_88966600
m54284U_201013_031047/180290569/ccs	chr2	+	197	1	Antisense	novelGene_ENSMUSG00000027551.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAACCTGGCTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	168792881	168793078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_168792900_168793100
m54284U_201013_031047/180292389/ccs	chr5	-	138	1	Intergenic	novelGene_2986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3603	False	NA	NA	False	NA	NA	NA	135907973	135907835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135907800_135908000
m54284U_201013_031047/18090693/ccs	chr18	-	182	1	Intergenic	novelGene_8860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTATCCAAATTATAC	NA	False	NA	NA	False	NA	NA	NA	32408326	32408144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_32408100_32408300
m54284U_201013_031047/18352893/ccs	chr6	-	179	1	Intergenic	novelGene_3421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAATTAAAACAAGACTAC	NA	False	NA	NA	False	NA	NA	NA	113309971	113309792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_113309800_113310000
m54284U_201013_031047/1836183/ccs	chr7	-	183	1	ISM	ENSMUSG00000087088.3	ENSMUST00000208892.2	8508	2	12297	919	12259	-919	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGGATGTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	83268791	83268608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_83268600_83268800
m54284U_201013_031047/1837146/ccs	chr2	+	137	1	Intergenic	novelGene_653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	27375722	27375859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_27375700_27375900
m54284U_201013_031047/18418194/ccs	chr2	+	152	1	Intergenic	novelGene_1178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATTAATTAAA	NA	False	NA	NA	False	NA	NA	NA	156062209	156062361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_156062200_156062400
m54284U_201013_031047/18743718/ccs	chr11	+	176	1	Intergenic	novelGene_6233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAACCAAACAAAC	6244	False	NA	NA	False	NA	NA	NA	95673241	95673417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95673200_95673400
m54284U_201013_031047/18745471/ccs	chr13	+	177	1	Intergenic	novelGene_7174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATATATTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	65521804	65521981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_65521800_65522000
m54284U_201013_031047/18746067/ccs	chr15	-	175	1	Intergenic	novelGene_7843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	772	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTACTTTTTAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	81437619	81437444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81437400_81437600
m54284U_201013_031047/18942394/ccs	chr11	+	198	1	Intergenic	novelGene_6406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAACAAATATATCTTTAA	2580	False	NA	NA	False	NA	NA	NA	107025319	107025517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107025300_107025500
m54284U_201013_031047/19006318/ccs	chr2	+	176	1	Intergenic	novelGene_849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATGATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	71202762	71202938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_71202800_71202900
m54284U_201013_031047/19072737/ccs	chr8	+	2333	1	Intergenic	novelGene_4232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGAGGGAGGGGAGAGA	1181	False	NA	NA	False	NA	NA	NA	25575249	25577582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_25575200_25577600
m54284U_201013_031047/19334821/ccs	chr3	+	184	1	Intergenic	novelGene_1598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAGAAGAAGAAGTTT	1753	False	NA	NA	False	NA	NA	NA	100787493	100787677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_100787500_100787700
m54284U_201013_031047/19399057/ccs	chr11	+	196	1	Intergenic	novelGene_6463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTGTGATCTTCTAAAA	4400	False	NA	NA	False	NA	NA	NA	115904557	115904753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115904600_115904800
m54284U_201013_031047/19401008/ccs	chr7	-	209	1	Intergenic	novelGene_3876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTATTTAGGTCT	NA	False	NA	NA	False	NA	NA	NA	64466595	64466386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_64466400_64466600
m54284U_201013_031047/1966771/ccs	chr17	+	291	1	Intergenic	novelGene_8467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAAAAAAAACGCTGTTC	2660	False	NA	NA	False	NA	NA	NA	28850638	28850929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_28850600_28850900
m54284U_201013_031047/1967646/ccs	chrX	-	1415	1	Intergenic	novelGene_9674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACCTCAAAAAAATTCAAC	NA	False	NA	NA	False	TTTAAA	-32	NA	151035662	151034247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_151034200_151035700
m54284U_201013_031047/19791977/ccs	chr1	+	186	1	Intergenic	novelGene_556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTACATACCTCATGTTT	7381	False	NA	NA	False	NA	NA	NA	191298113	191298299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_191298100_191298300
m54284U_201013_031047/19793404/ccs	chr2	-	152	1	Intergenic	novelGene_1026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGAAATCTAG	24	False	NA	NA	False	NA	NA	NA	121241809	121241657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_121241700_121241800
m54284U_201013_031047/19793688/ccs	chr16	-	169	1	Intergenic	novelGene_8329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTTTTTTTTTAGGG	NA	False	NA	NA	False	NA	NA	NA	92090516	92090347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_92090300_92090500
m54284U_201013_031047/19860117/ccs	chr13	+	1739	1	Intergenic	novelGene_7140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATGATGATTTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	62423333	62425072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62423300_62425100
m54284U_201013_031047/20121936/ccs	chr11	-	175	1	Intergenic	novelGene_5715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAGAGTTTT	7595	False	NA	NA	False	NA	NA	NA	20056654	20056479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_20056500_20056700
m54284U_201013_031047/20252585/ccs	chr6	-	179	1	Intergenic	novelGene_3505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATTCCTTTGACCCT	NA	False	NA	NA	False	NA	NA	NA	124972745	124972566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_124972600_124972700
m54284U_201013_031047/20316651/ccs	chr18	+	194	1	Intergenic	novelGene_8853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATAGGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	31659330	31659524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_31659300_31659500
m54284U_201013_031047/2034052/ccs	chr7	+	180	1	Intergenic	novelGene_4120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTGCTTTCTACCCA	NA	False	NA	NA	False	NA	NA	NA	130091974	130092154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_130092000_130092200
m54284U_201013_031047/20513371/ccs	chr16	+	177	1	Intergenic	novelGene_8270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	48102865	48103042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_48102900_48103000
m54284U_201013_031047/20580731/ccs	chrX	+	4565	1	Antisense	novelGene_ENSMUSG00002076282.1_AS_novelGene_ENSMUSG00000086503.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102512070	102516635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chrX_+_102512100_102516600
m54284U_201013_031047/20644949/ccs	chr14	+	182	1	Intergenic	novelGene_7420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAAAAATTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	47447921	47448103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_47447900_47448100
m54284U_201013_031047/20775478/ccs	chr16	+	200	1	Intergenic	novelGene_8186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCTCACTCTCTCCT	NA	False	NA	NA	False	NA	NA	NA	30704689	30704889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_30704700_30704900
m54284U_201013_031047/20776780/ccs	chr9	+	181	1	Intergenic	novelGene_4828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAGCAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	59429832	59430013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59429800_59430000
m54284U_201013_031047/20777717/ccs	chr3	+	176	1	Intergenic	novelGene_1377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAACCTAGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	32705852	32706028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_32705900_32706000
m54284U_201013_031047/2098737/ccs	chr6	+	172	1	Intergenic	novelGene_3181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	2741	False	NA	NA	False	NA	NA	NA	37532963	37533135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_37533000_37533100
m54284U_201013_031047/2098950/ccs	chr9	-	187	1	Intergenic	novelGene_4624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACCAATGATGCAAGTAA	NA	False	NA	NA	False	NA	NA	NA	3433546	3433359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_3433400_3433500
m54284U_201013_031047/21235111/ccs	chr18	+	129	1	Intergenic	novelGene_8858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-15	NA	32188966	32189095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_32189000_32189100
m54284U_201013_031047/21561610/ccs	chr15	-	196	1	Intergenic	novelGene_7851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGCCCCATGACACAGC	NA	False	NA	NA	False	NA	NA	NA	81771511	81771315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81771300_81771500
m54284U_201013_031047/2164520/ccs	chr1	+	177	1	Intergenic	novelGene_439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTAAATTTTGGT	NA	False	NA	NA	False	NA	NA	NA	163162898	163163075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_163162900_163163100
m54284U_201013_031047/21692977/ccs	chr6	-	194	1	Intergenic	novelGene_3252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTGATATGAAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	47889335	47889141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47889100_47889300
m54284U_201013_031047/21758994/ccs	chr19	-	184	1	Intergenic	novelGene_9231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTCAAAAAAAGAGAAAA	8234	False	NA	NA	False	NA	NA	NA	36106065	36105881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_36105900_36106100
m54284U_201013_031047/21823815/ccs	chr1	+	199	1	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAACAACAACCAGA	NA	False	NA	NA	False	NA	NA	NA	36583555	36583754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36583600_36583800
m54284U_201013_031047/22153438/ccs	chr19	+	10010	1	Antisense	novelGene_ENSMUSG00000092274.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	3268	False	NA	NA	False	NA	NA	NA	5881901	5891911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_+_5881900_5891900
m54284U_201013_031047/22218568/ccs	chr11	+	176	1	Intergenic	novelGene_6058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATTTATATAAGTA	451	False	NA	NA	False	NA	NA	NA	77954309	77954485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77954300_77954500
m54284U_201013_031047/22284030/ccs	chrX	-	196	1	Intergenic	novelGene_9668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAATGAAATTTG	NA	False	NA	NA	False	NA	NA	NA	150185687	150185491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_150185500_150185700
m54284U_201013_031047/2230741/ccs	chr11	+	172	1	Intergenic	novelGene_6286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATATTTTTTAAAAATT	3352	False	NA	NA	False	NA	NA	NA	97771398	97771570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97771400_97771600
m54284U_201013_031047/22414882/ccs	chr1	+	185	1	Intergenic	novelGene_473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAAAAGAAGTT	2053	False	NA	NA	False	NA	NA	NA	171034909	171035094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171034900_171035100
m54284U_201013_031047/22544421/ccs	chr11	-	178	1	Intergenic	novelGene_6488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACCAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117272328	117272150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_117272200_117272300
m54284U_201013_031047/22677631/ccs	chr5	+	199	1	Intergenic	novelGene_2563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACTCAAGAATGAGACA	NA	False	NA	NA	False	NA	NA	NA	37622527	37622726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_37622500_37622700
m54284U_201013_031047/22743517/ccs	chr14	+	2011	1	NIC	ENSMUSG00000012405.17	novel	1922	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTAAAGGTGTTAT	NA	False	NA	2	True	AATAAA	-17	NA	4198725	4200736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_4198700_4200700
m54284U_201013_031047/22872424/ccs	chr7	+	177	1	Intergenic	novelGene_4038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACAAACAAACAAACT	NA	False	NA	NA	False	NA	NA	NA	115816030	115816207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_115816000_115816200
m54284U_201013_031047/23005235/ccs	chr16	+	199	1	Intergenic	novelGene_8079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTGCTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	13691481	13691680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13691500_13691700
m54284U_201013_031047/23071297/ccs	chr1	+	171	1	Intergenic	novelGene_197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGACTTATTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	75209269	75209440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_75209300_75209400
m54284U_201013_031047/23397294/ccs	chr19	+	174	1	Intergenic	novelGene_9330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGTAAGTTAATCA	NA	False	NA	NA	False	NA	NA	NA	47716590	47716764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_47716600_47716800
m54284U_201013_031047/2359502/ccs	chr13	-	192	1	Intergenic	novelGene_7083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGGACCCTTCCACCC	NA	False	NA	NA	False	NA	NA	NA	54808355	54808163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_54808200_54808400
m54284U_201013_031047/2361531/ccs	chr6	-	207	1	Intergenic	novelGene_3593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTAAGTCTGATGCAAT	NA	False	NA	NA	False	NA	NA	NA	148978184	148977977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148978000_148978200
m54284U_201013_031047/23857813/ccs	chr12	+	212	1	Intergenic	novelGene_6691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAGGATCAGAGGATA	NA	False	NA	NA	False	AATAAA	-6	NA	69978028	69978240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_69978000_69978200
m54284U_201013_031047/24313863/ccs	chr8	+	278	1	Intergenic	novelGene_4480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTCCGAGAC	NA	False	NA	NA	False	NA	NA	NA	108317904	108318182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_108317900_108318200
m54284U_201013_031047/24315142/ccs	chr10	+	205	1	Intergenic	novelGene_5460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCCTTTCAGAATGG	6129	False	NA	NA	False	NA	NA	NA	81006847	81007052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_81006800_81007100
m54284U_201013_031047/24380769/ccs	chr9	-	167	1	Intergenic	novelGene_5131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATACCGTATGTCTCT	771	False	NA	NA	False	NA	NA	NA	114500462	114500295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_114500300_114500500
m54284U_201013_031047/24445008/ccs	chr2	+	182	1	Intergenic	novelGene_861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAAGTTGATAACTTT	NA	False	NA	NA	False	NA	NA	NA	73164925	73165107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_73164900_73165100
m54284U_201013_031047/24510688/ccs	chr12	-	225	1	Intergenic	novelGene_6646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCCTGGGACCCCATC	5568	False	NA	NA	False	NA	NA	NA	54861633	54861408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_54861400_54861600
m54284U_201013_031047/24707457/ccs	chrX	+	901	1	NIC	ENSMUSG00000031231.5	novel	1001	3	NA	NA	0	487	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGCCCAACTGATCT	NA	False	NA	NA	False	NA	NA	NA	105059321	105060222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_105059300_105060200
m54284U_201013_031047/24772714/ccs	chr13	+	196	1	Intergenic	novelGene_7023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACACCATGACTGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	38033516	38033712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_38033500_38033700
m54284U_201013_031047/24773021/ccs	chr14	+	170	1	Intergenic	novelGene_7554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATCTTTTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	79560503	79560673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_79560500_79560700
m54284U_201013_031047/24903727/ccs	chr18	+	177	1	Intergenic	novelGene_8805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	9473375	9473552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_9473400_9473600
m54284U_201013_031047/2490544/ccs	chrX	+	261	1	Intergenic	novelGene_9715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGTAGATGAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	161449969	161450230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_161450000_161450200
m54284U_201013_031047/24969832/ccs	chr8	-	174	1	Intergenic	novelGene_4346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75660459	75660285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_75660300_75660500
m54284U_201013_031047/24969915/ccs	chr1	+	3115	1	Antisense	novelGene_ENSMUSG00000109510.2_AS_novelGene_ENSMUSG00000067653.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36572912	36576027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_36572900_36576000
m54284U_201013_031047/25035143/ccs	chr4	+	3830	1	Antisense	novelGene_ENSMUSG00000028878.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGAGGTGGTGGCAC	5578	False	NA	NA	False	TTTAAA	-22	NA	132644651	132648481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_+_132644700_132648500
m54284U_201013_031047/25036127/ccs	chr8	+	1254	1	Intergenic	novelGene_4341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGGCTCTTAGTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	73302357	73303611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_73302400_73303600
m54284U_201013_031047/25101340/ccs	chr2	+	2079	1	Intergenic	novelGene_1187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156973981	156976060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_156974000_156976100
m54284U_201013_031047/25494414/ccs	chr5	+	178	1	Intergenic	novelGene_2997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTTATGTAATATAATA	NA	False	NA	NA	False	NA	NA	NA	137325004	137325182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137325000_137325200
m54284U_201013_031047/25690271/ccs	chr17	+	1615	1	NIC	ENSMUSG00000097217.3	novel	1207	2	NA	NA	0	-12286	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACAAG	NA	False	NA	NA	False	AATAAA	-7	NA	32503762	32505377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_32503800_32505400
m54284U_201013_031047/25756005/ccs	chr5	+	192	1	Intergenic	novelGene_2565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAGACCAGCATCAT	NA	False	NA	NA	False	NA	NA	NA	38034565	38034757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_38034600_38034800
m54284U_201013_031047/25822211/ccs	chr8	-	175	1	Intergenic	novelGene_4318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTGTTTTTTCGAG	NA	False	NA	NA	False	NA	NA	NA	70450474	70450299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_70450300_70450500
m54284U_201013_031047/25888150/ccs	chr5	-	159	1	Intergenic	novelGene_2960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134350071	134349912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_134349900_134350100
m54284U_201013_031047/25952601/ccs	chr19	-	180	1	Intergenic	novelGene_9282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTAAAGTACTAGT	NA	False	NA	NA	False	NA	NA	NA	44365722	44365542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_44365500_44365700
m54284U_201013_031047/26019575/ccs	chr13	-	181	1	Intergenic	novelGene_7021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTGAATTTTAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	37956445	37956264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_37956300_37956400
m54284U_201013_031047/26083384/ccs	chr7	-	187	1	Intergenic	novelGene_4112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGATATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	127565340	127565153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127565200_127565300
m54284U_201013_031047/26150811/ccs	chrX	+	176	1	Antisense	novelGene_ENSMUSG00000083200.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAGGTAATGATAG	NA	False	NA	NA	False	NA	NA	NA	143069711	143069887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chrX_+_143069700_143069900
m54284U_201013_031047/26216870/ccs	chrX	+	183	1	Antisense	novelGene_ENSMUSG00000092752.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATATTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	161657969	161658152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chrX_+_161658000_161658200
m54284U_201013_031047/26280821/ccs	chr11	+	180	1	Intergenic	novelGene_6244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATTTATTTACTA	4366	False	NA	NA	False	NA	NA	NA	95926879	95927059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95926900_95927100
m54284U_201013_031047/26348157/ccs	chr2	+	183	1	Intergenic	novelGene_788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGAATAG	NA	False	NA	NA	False	NA	NA	NA	46225339	46225522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_46225300_46225500
m54284U_201013_031047/26413265/ccs	chr16	+	141	1	Intergenic	novelGene_8037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAAAAAATTATTATTTAA	NA	False	NA	NA	False	NA	NA	NA	4871186	4871327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_4871200_4871300
m54284U_201013_031047/264755/ccs	chrX	-	176	1	Intergenic	novelGene_9606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACTACCATAATT	NA	False	NA	NA	False	NA	NA	NA	105223840	105223664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_105223700_105223800
m54284U_201013_031047/26542947/ccs	chr5	-	179	1	Intergenic	novelGene_2472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	21039568	21039389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_21039400_21039600
m54284U_201013_031047/26544089/ccs	chr9	-	175	1	Intergenic	novelGene_4762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAGGATTTGT	NA	False	NA	NA	False	NA	NA	NA	50839865	50839690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_50839700_50839900
m54284U_201013_031047/26609918/ccs	chr10	+	188	1	Intergenic	novelGene_5296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATAATTCTTGGCTCTT	801	False	NA	NA	False	NA	NA	NA	50903895	50904083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_50903900_50904100
m54284U_201013_031047/26806815/ccs	chr17	+	159	1	Intergenic	novelGene_8376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	15686853	15687012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_15686900_15687000
m54284U_201013_031047/27066659/ccs	chrX	+	177	1	Intergenic	novelGene_9490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTGTGTATCCTTT	NA	False	NA	NA	False	NA	NA	NA	70796354	70796531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_70796400_70796500
m54284U_201013_031047/27199825/ccs	chr19	+	1068	6	NIC	ENSMUSG00000024845.20	novel	1615	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	163	junction_2	211.997735836966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGACAGTTGCACTTT	4371	False	NA	NA	False	AATAAA	-16	NA	4175959	4181726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_4176200_4177055_4177132_4177548_4177836_4181029_4181075_4181227_4181282_4181360
m54284U_201013_031047/27329315/ccs	chr6	+	212	1	Intergenic	novelGene_3362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATAACTTGCCTCTGCCT	NA	False	NA	NA	False	NA	NA	NA	86357359	86357571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_86357400_86357600
m54284U_201013_031047/27394487/ccs	chr2	-	3629	1	Genic_Genomic	ENSMUSG00000038400.16	novel	NA	NA	NA	NA	-115	-44809	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAGAAA	967	False	NA	NA	False	NA	NA	NA	173118441	173114812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_173114800_173118400
m54284U_201013_031047/27460276/ccs	chr2	+	193	1	Intergenic	novelGene_1021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAACAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	120803003	120803196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_120803000_120803200
m54284U_201013_031047/27525557/ccs	chr18	-	218	1	Intergenic	novelGene_8909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTGGGTGAGCTATGG	NA	False	NA	NA	False	NA	NA	NA	36382879	36382661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36382700_36382900
m54284U_201013_031047/2754082/ccs	chr10	-	176	1	Intergenic	novelGene_5367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACGAGAGGGGAA	NA	False	NA	NA	False	NA	NA	NA	63303151	63302975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_63303000_63303200
m54284U_201013_031047/27590856/ccs	chr10	+	179	1	Intergenic	novelGene_5472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTGAGTAAATTTTG	NA	False	NA	11	True	NA	NA	NA	82444256	82444435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_82444300_82444400
m54284U_201013_031047/27789407/ccs	chr10	+	169	1	Intergenic	novelGene_5476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTTTTAAAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	83124154	83124323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_83124200_83124300
m54284U_201013_031047/27854136/ccs	chr11	-	200	1	Intergenic	novelGene_6140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGAAGCTGTGCTGCA	5511	False	NA	NA	False	NA	NA	NA	85077970	85077770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_85077800_85078000
m54284U_201013_031047/27920445/ccs	chr19	+	175	1	Intergenic	novelGene_9161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATCTTTTTTTATA	1890	False	NA	NA	False	NA	NA	NA	10861782	10861957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_10861800_10862000
m54284U_201013_031047/28180790/ccs	chr2	+	177	1	Intergenic	novelGene_971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCATTCATTGAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	104717905	104718082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_104717900_104718100
m54284U_201013_031047/2820577/ccs	chr17	+	178	1	Intergenic	novelGene_8439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTATATTTTCTATT	5307	False	NA	NA	False	NA	NA	NA	27090283	27090461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27090300_27090500
m54284U_201013_031047/28377547/ccs	chr9	-	154	1	Intergenic	novelGene_4695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATGTCTGCTATCCTC	NA	False	NA	-1	True	NA	NA	NA	31501701	31501547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_31501500_31501700
m54284U_201013_031047/28378349/ccs	chr9	-	178	1	Intergenic	novelGene_4684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATATCTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29754502	29754324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_29754300_29754500
m54284U_201013_031047/28510472/ccs	chr3	-	205	1	Intergenic	novelGene_1626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGTCCTGACTCTCTA	NA	False	NA	NA	False	AAAACA	-11	NA	108163670	108163465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108163500_108163700
m54284U_201013_031047/28706457/ccs	chr11	+	189	1	Intergenic	novelGene_5659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCTTCACAGAACAAAGG	9734	False	NA	NA	False	NA	NA	NA	4276404	4276593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4276400_4276600
m54284U_201013_031047/28772194/ccs	chr6	-	166	1	Intergenic	novelGene_3501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAACAAATAGTTT	NA	False	NA	NA	False	NA	NA	NA	124829837	124829671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_124829700_124829800
m54284U_201013_031047/28772966/ccs	chr11	-	177	1	Intergenic	novelGene_5794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATGAAGAACAA	2876	False	NA	NA	False	NA	NA	NA	48925350	48925173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_48925200_48925400
m54284U_201013_031047/2885360/ccs	chr4	+	185	1	Intergenic	novelGene_2376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTAAGGAATGGAATGC	NA	False	NA	NA	False	NA	NA	NA	149177117	149177302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149177100_149177300
m54284U_201013_031047/28902684/ccs	chr15	+	194	1	Intergenic	novelGene_7631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTAATGTAAGACGGG	5796	False	NA	NA	False	NA	NA	NA	8843870	8844064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8843900_8844100
m54284U_201013_031047/29229382/ccs	chr17	-	179	1	Intergenic	novelGene_8558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACCAAACAAACA	8271	False	NA	NA	False	NA	NA	NA	35735848	35735669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35735700_35735800
m54284U_201013_031047/29230793/ccs	chr6	-	194	1	Intergenic	novelGene_3302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGAGTGGCCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	66480381	66480187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_66480200_66480400
m54284U_201013_031047/29231205/ccs	chr6	+	314	1	FSM	ENSMUSG00000072940.6	ENSMUST00000119024.2	210	1	-19	-85	-19	85	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAGTAAATACACGTTACT	NA	False	NA	NA	False	AATAAA	-21	NA	86310993	86311307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_86311000_86311300
m54284U_201013_031047/29361107/ccs	chr7	-	205	1	Intergenic	novelGene_3985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGACCTAGGTTTGGT	NA	False	NA	NA	False	NA	NA	NA	101271223	101271018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_101271000_101271200
m54284U_201013_031047/2949729/ccs	chr5	+	249	1	Intergenic	novelGene_2751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTACAAGAGAGGGGGCTG	4250	False	NA	NA	False	NA	NA	NA	108634289	108634538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108634300_108634500
m54284U_201013_031047/29820204/ccs	chr1	+	168	1	Intergenic	novelGene_201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGCGGGAGGGAGCAG	526	False	NA	NA	False	NA	NA	NA	75436533	75436701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_75436500_75436700
m54284U_201013_031047/29821415/ccs	chr7	+	191	1	Intergenic	novelGene_4156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATCTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140607191	140607382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140607200_140607400
m54284U_201013_031047/29887018/ccs	chr3	+	259	1	Intergenic	novelGene_1524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAGAAACCGAGGC	NA	False	NA	NA	False	NA	NA	NA	89700902	89701161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89700900_89701200
m54284U_201013_031047/3017407/ccs	chrX	+	174	1	Intergenic	novelGene_9725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAACAATATA	NA	False	NA	NA	False	NA	NA	NA	161634344	161634518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_161634300_161634500
m54284U_201013_031047/30277922/ccs	chr16	-	180	1	Intergenic	novelGene_8160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTCTCTCCCCCCACC	NA	False	NA	NA	False	NA	NA	NA	22006206	22006026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_22006000_22006200
m54284U_201013_031047/30343310/ccs	chr7	-	163	1	Intergenic	novelGene_4021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAGGCCACTAA	NA	False	NA	NA	False	NA	NA	NA	109760767	109760604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_109760600_109760800
m54284U_201013_031047/30607718/ccs	chr17	+	174	1	Intergenic	novelGene_8541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGTTTCAGGGGGC	1130	False	NA	NA	False	NA	NA	NA	34213113	34213287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_34213100_34213300
m54284U_201013_031047/30607747/ccs	chr13	+	171	1	Intergenic	novelGene_7251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATCCTAGAGAA	NA	False	NA	NA	False	NA	NA	NA	96779003	96779174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_96779000_96779200
m54284U_201013_031047/30739055/ccs	chr10	+	207	1	Intergenic	novelGene_5203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCTTCATCACCTTTA	NA	False	NA	NA	False	NA	NA	NA	13937128	13937335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_13937100_13937300
m54284U_201013_031047/30804297/ccs	chr9	+	3684	1	Intergenic	novelGene_4757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	AATACA	-39	NA	49702101	49705785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_49702100_49705800
m54284U_201013_031047/30804741/ccs	chrX	-	187	1	ISM	ENSMUSG00000006678.7	ENSMUST00000127718.2	3612	2	8668	213	8640	9	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGCAGTGCCTATCTAA	NA	False	NA	NA	False	NA	NA	NA	92667081	92666894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_-_92666900_92667100
m54284U_201013_031047/30804772/ccs	chr6	+	167	1	Intergenic	novelGene_3489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAAGTGAGG	6667	False	NA	NA	False	NA	NA	NA	122777368	122777535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_122777400_122777500
m54284U_201013_031047/30869392/ccs	chr6	+	172	1	Intergenic	novelGene_3129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATTAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29602949	29603121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29602900_29603100
m54284U_201013_031047/30934596/ccs	chr14	+	177	1	Intergenic	novelGene_7584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGACACCCTGA	NA	False	NA	NA	False	NA	NA	NA	101857572	101857749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_101857600_101857700
m54284U_201013_031047/31064423/ccs	chr19	+	174	1	Intergenic	novelGene_9175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGGAAGACGAGG	NA	False	NA	NA	False	NA	NA	NA	21505523	21505697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_21505500_21505700
m54284U_201013_031047/31066277/ccs	chrX	+	196	1	Intergenic	novelGene_9402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATCGACTTACCTGTTTG	NA	False	NA	NA	False	NA	NA	NA	17633640	17633836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_17633600_17633800
m54284U_201013_031047/31263366/ccs	chr6	+	193	1	Intergenic	novelGene_3469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAGTACTTGTAGA	NA	False	NA	NA	False	NA	NA	NA	120901818	120902011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120901800_120902000
m54284U_201013_031047/3147872/ccs	chr18	+	126	1	Intergenic	novelGene_8874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAAAGAACTCTATT	NA	False	NA	NA	False	NA	NA	NA	34826846	34826972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_34826800_34827000
m54284U_201013_031047/31523364/ccs	chr8	+	169	1	Intergenic	novelGene_4222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAATAAGTAAAT	NA	False	NA	NA	False	NA	NA	NA	22611245	22611414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_22611200_22611400
m54284U_201013_031047/31850841/ccs	chr5	-	170	1	Intergenic	novelGene_3031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGTCTATGGGGA	NA	False	NA	NA	False	NA	NA	NA	142538864	142538694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142538700_142538900
m54284U_201013_031047/31851225/ccs	chr2	+	183	1	Intergenic	novelGene_669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCACAATATTGTGTTAT	NA	False	NA	NA	False	NA	NA	NA	29577896	29578079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_29577900_29578100
m54284U_201013_031047/31981891/ccs	chr14	-	179	1	Intergenic	novelGene_7413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAGCTGGGCA	NA	False	NA	NA	False	NA	NA	NA	45687682	45687503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_45687500_45687700
m54284U_201013_031047/31982716/ccs	chr7	+	189	1	Intergenic	novelGene_3954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAGGGACTATTACATA	8621	False	NA	NA	False	NA	NA	NA	96627717	96627906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_96627700_96627900
m54284U_201013_031047/31982841/ccs	chr14	-	183	1	Intergenic	novelGene_7508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCTTTCTAGATATGAC	5761	False	NA	NA	False	NA	NA	NA	63239761	63239578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_63239600_63239800
m54284U_201013_031047/32047544/ccs	chr13	+	2684	12	NIC	ENSMUSG00000032727.15	novel	5279	13	NA	NA	0	-1610	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.5246435544121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGTTTGTTCCGAGGC	NA	False	NA	NA	False	ATTAAA	-20	NA	111822711	111852560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_111822889_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848219_111848315_111850774_111850903_111850978_111851122_111851217
m54284U_201013_031047/32047596/ccs	chr10	+	176	1	Intergenic	novelGene_5503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAACTACTCCTAT	NA	False	NA	NA	False	NA	NA	NA	92968312	92968488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_92968300_92968500
m54284U_201013_031047/32178353/ccs	chr13	-	199	1	Intergenic	novelGene_7243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAACAACAAAAACTGT	NA	False	NA	NA	False	NA	NA	NA	94951173	94950974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_94951000_94951200
m54284U_201013_031047/32180774/ccs	chr2	+	165	1	Intergenic	novelGene_648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAAGAACTGATTGATCT	NA	False	NA	NA	False	NA	NA	NA	26755691	26755856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_26755700_26755900
m54284U_201013_031047/32245014/ccs	chr2	+	160	1	Intergenic	novelGene_1299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAATAAATCAAAAA	NA	False	NA	NA	False	NA	NA	NA	176755950	176756110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_176756000_176756100
m54284U_201013_031047/32309330/ccs	chr14	+	185	1	Intergenic	novelGene_7582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCTTTAAACATGGAG	NA	False	NA	NA	False	NA	NA	NA	99624190	99624375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_99624200_99624400
m54284U_201013_031047/32443017/ccs	chr2	+	150	1	Intergenic	novelGene_873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGAATTGCTTTT	NA	False	NA	NA	False	NA	NA	NA	75467482	75467632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_75467500_75467600
m54284U_201013_031047/32574249/ccs	chr19	+	214	1	Intergenic	novelGene_9190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	24913917	24914131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_24913900_24914100
m54284U_201013_031047/32702480/ccs	chr4	+	168	1	Intergenic	novelGene_2074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATTGGCATAAA	NA	False	NA	NA	False	NA	NA	NA	120683456	120683624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_120683500_120683600
m54284U_201013_031047/32770686/ccs	chr2	+	196	1	Intergenic	novelGene_1270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCTGAGAGCCGGGG	5484	False	NA	NA	False	NA	NA	NA	168676001	168676197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168676000_168676200
m54284U_201013_031047/32835717/ccs	chr17	+	178	1	Intergenic	novelGene_8651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGAGGTAAAATTCAAA	7248	False	NA	NA	False	NA	NA	NA	56400948	56401126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_56400900_56401100
m54284U_201013_031047/32899348/ccs	chr7	-	177	1	Intergenic	novelGene_3658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGGCAGTGGCTG	NA	False	NA	NA	False	NA	NA	NA	14043769	14043592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_14043600_14043800
m54284U_201013_031047/33227868/ccs	chr8	+	184	1	Intergenic	novelGene_4531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTACAAAGTGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	118032507	118032691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_118032500_118032700
m54284U_201013_031047/33752521/ccs	chr11	+	178	1	Intergenic	novelGene_6408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAACAAAAAAACAAA	3817	False	NA	NA	False	NA	NA	NA	107029878	107030056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107029900_107030100
m54284U_201013_031047/33818972/ccs	chr2	+	195	1	Intergenic	novelGene_686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAGAAACCCAGAGGAAA	NA	False	NA	NA	False	NA	NA	NA	30349555	30349750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30349600_30349800
m54284U_201013_031047/33882412/ccs	chr13	+	201	1	FSM	ENSMUSG00000103398.2	ENSMUST00000195630.2	1840	1	1639	0	1639	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGATATGTTCTTTAT	NA	False	NA	NA	False	NA	NA	NA	67601415	67601616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_67601400_67601600
m54284U_201013_031047/33882643/ccs	chr11	-	183	1	Intergenic	novelGene_6189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTATTTGTATAGCGTG	NA	False	NA	NA	False	NA	NA	NA	88484458	88484275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88484300_88484500
m54284U_201013_031047/33883018/ccs	chrX	+	178	1	Intergenic	novelGene_9530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	92679327	92679505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_92679300_92679500
m54284U_201013_031047/33950523/ccs	chr12	-	177	1	Intergenic	novelGene_6797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAGCAACAACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	84294903	84294726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_84294700_84294900
m54284U_201013_031047/34014006/ccs	chr16	+	176	1	Intergenic	novelGene_8240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35676579	35676755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_35676600_35676800
m54284U_201013_031047/34277523/ccs	chr1	+	159	1	Intergenic	novelGene_259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	100311832	100311991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_100311800_100312000
m54284U_201013_031047/34408155/ccs	chr11	-	176	1	Intergenic	novelGene_6511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACATGCCTC	NA	False	NA	NA	False	NA	NA	NA	120366867	120366691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_120366700_120366900
m54284U_201013_031047/34538396/ccs	chr11	+	4545	1	NIC	ENSMUSG00000020544.15	novel	1224	4	NA	NA	0	-1944	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90528998	90533543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_90529000_90533500
m54284U_201013_031047/34538497/ccs	chr17	+	161	1	Intergenic	novelGene_8395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTACATTGAAAATGTAAA	1506	False	NA	NA	False	NA	NA	NA	23809647	23809808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_23809600_23809800
m54284U_201013_031047/34540024/ccs	chr3	+	180	1	Intergenic	novelGene_1709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGCTGGAACCTC	NA	False	NA	NA	False	NA	NA	NA	142679324	142679504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_142679300_142679500
m54284U_201013_031047/34605886/ccs	chr9	+	184	1	Intergenic	novelGene_4990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAAAAGTTTGCCGGG	NA	False	NA	NA	False	NA	NA	NA	88453534	88453718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_88453500_88453700
m54284U_201013_031047/3474356/ccs	chr15	-	166	1	Intergenic	novelGene_7736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTTTT	NA	False	NA	NA	False	NA	NA	NA	59740669	59740503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_59740500_59740700
m54284U_201013_031047/34801880/ccs	chr2	+	1019	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	603	-320	603	320	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATATTTTCTA	NA	False	NA	-5	True	AATAAA	-15	NA	80668087	80669106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_80668100_80669100
m54284U_201013_031047/34802394/ccs	chr12	+	191	1	Intergenic	novelGene_6585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGGTCCCCTGACTTT	NA	False	NA	NA	False	NA	NA	NA	21144047	21144238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_21144000_21144200
m54284U_201013_031047/34998083/ccs	chr4	+	178	1	Intergenic	novelGene_2050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATCTGTTTTATT	NA	False	NA	NA	False	NA	NA	NA	117931729	117931907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_117931700_117931900
m54284U_201013_031047/35129494/ccs	chr2	+	171	1	Intergenic	novelGene_1330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	5555	False	NA	NA	False	NA	NA	NA	181246172	181246343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_181246200_181246300
m54284U_201013_031047/35195572/ccs	chr8	+	4014	1	Intergenic	novelGene_4345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTTGAAGCAAACAGAAA	NA	False	NA	NA	False	NA	NA	NA	73720990	73725004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_73721000_73725000
m54284U_201013_031047/35261079/ccs	chr4	-	3574	1	Genic_Genomic	ENSMUSG00000028649.22	novel	NA	NA	NA	NA	-3002	-144909	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	123581155	123577581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_-_123577600_123581200
m54284U_201013_031047/35523224/ccs	chr8	+	177	1	Intergenic	novelGene_4380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTTAATCCCAA	280	False	NA	NA	False	NA	NA	NA	85731099	85731276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_85731100_85731300
m54284U_201013_031047/35784838/ccs	chr15	-	172	1	Intergenic	novelGene_7778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	76550068	76549896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76549900_76550100
m54284U_201013_031047/36176776/ccs	chr4	+	136	1	Intergenic	novelGene_1791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACATAAAATAAAATTAAAT	NA	False	NA	NA	False	NA	NA	NA	33524207	33524343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_33524200_33524300
m54284U_201013_031047/36309334/ccs	chr12	+	181	1	Intergenic	novelGene_6639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGTGTCATTA	NA	False	NA	NA	False	NA	NA	NA	54688552	54688733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_54688600_54688700
m54284U_201013_031047/36440165/ccs	chr2	-	183	1	Intergenic	novelGene_1160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGGATTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	155234767	155234584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_155234600_155234800
m54284U_201013_031047/36701012/ccs	chr1	+	179	1	Intergenic	novelGene_469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGGTGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	170974184	170974363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_170974200_170974400
m54284U_201013_031047/36701699/ccs	chr9	-	2381	10	NIC	ENSMUSG00000039048.16	novel	2232	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_6	58.6155079972679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122266	35115503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119279_35120333_35120453_35120711_35120826_35121240_35121462_35122102
m54284U_201013_031047/3671020/ccs	chr10	-	168	1	Intergenic	novelGene_5573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTT	NA	False	NA	NA	False	NA	NA	NA	120345695	120345527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_120345500_120345700
m54284U_201013_031047/36962552/ccs	chr13	+	194	1	Intergenic	novelGene_7134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGTTTTTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	59899751	59899945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_59899800_59899900
m54284U_201013_031047/37095781/ccs	chr3	-	177	1	Intergenic	novelGene_1725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGAGTGCTATT	NA	False	NA	NA	False	NA	NA	NA	153814672	153814495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_153814500_153814700
m54284U_201013_031047/37160812/ccs	chr10	+	134	1	Intergenic	novelGene_5290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAGGCACAGTACA	9716	False	NA	NA	False	NA	NA	NA	45885022	45885156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_45885000_45885200
m54284U_201013_031047/37161296/ccs	chr11	+	181	1	Intergenic	novelGene_6495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATATATTCAGA	NA	False	NA	NA	False	NA	NA	NA	118125113	118125294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_118125100_118125300
m54284U_201013_031047/3738093/ccs	chr11	-	177	1	Intergenic	novelGene_6267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAATAGAAAAAT	4498	False	NA	NA	False	NA	NA	NA	97145556	97145379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97145400_97145600
m54284U_201013_031047/37554843/ccs	chr1	+	184	1	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGACCTCATAAAATTGCA	5824	False	NA	NA	False	NA	NA	NA	33744765	33744949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_33744800_33744900
m54284U_201013_031047/37750430/ccs	chr16	+	151	1	Intergenic	novelGene_8296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	67319637	67319788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_67319600_67319800
m54284U_201013_031047/37945701/ccs	chr9	-	6353	12	NNC	ENSMUSG00000032423.13	novel	9450	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	21	junction_5	264.084822336366	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCAGGAGTCCAAGAATT	NA	False	NA	-16	True	AATAAA	-28	NA	88364249	88331783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345202_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
m54284U_201013_031047/38012653/ccs	chr4	+	177	1	Intergenic	novelGene_2294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTTAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	140419028	140419205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_140419000_140419200
m54284U_201013_031047/38077764/ccs	chr12	+	174	1	Intergenic	novelGene_6918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGACAGCTACAGT	NA	False	NA	8	True	NA	NA	NA	111520312	111520486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111520300_111520500
m54284U_201013_031047/38275766/ccs	chr14	+	179	1	Intergenic	novelGene_7516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAAATTGGTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	66074262	66074441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_66074300_66074400
m54284U_201013_031047/38339452/ccs	chr5	+	188	1	Intergenic	novelGene_2524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTGAGGTTAAAAATC	NA	False	NA	NA	False	NA	NA	NA	32669904	32670092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_32669900_32670100
m54284U_201013_031047/38601223/ccs	chr7	+	191	1	Intergenic	novelGene_4166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGTATTTAAAAAAAAAAAA	7422	False	NA	NA	False	NA	NA	NA	140928362	140928553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140928400_140928600
m54284U_201013_031047/38667326/ccs	chr4	+	176	1	Intergenic	novelGene_2189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132063793	132063969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132063800_132064000
m54284U_201013_031047/38797501/ccs	chr6	+	191	1	Intergenic	novelGene_3456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTTGTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	120276211	120276402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120276200_120276400
m54284U_201013_031047/38864396/ccs	chr17	+	182	1	Intergenic	novelGene_8641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACCATACACTTTA	6327	False	NA	NA	False	NA	NA	NA	50602824	50603006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_50602800_50603000
m54284U_201013_031047/38931101/ccs	chr13	-	173	1	Intergenic	novelGene_7299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTGCTTAGTAGATTT	3440	False	NA	NA	False	NA	NA	NA	109834219	109834046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_109834000_109834200
m54284U_201013_031047/39322104/ccs	chr11	-	185	1	Intergenic	novelGene_6022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCAAATCTGTAGCTTT	NA	False	NA	NA	False	NA	NA	NA	75887452	75887267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75887300_75887500
m54284U_201013_031047/39387598/ccs	chr8	-	176	1	Intergenic	novelGene_4334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAATTAACAAC	NA	False	NA	NA	False	NA	NA	NA	72893159	72892983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_72893000_72893200
m54284U_201013_031047/39454700/ccs	chr1	+	4663	1	NIC	ENSMUSG00000026289.16	novel	749	6	NA	NA	0	-7265	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGAGCCATGTCTGGTG	7288	False	NA	NA	False	NA	NA	NA	87683777	87688440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87683800_87688400
m54284U_201013_031047/39650532/ccs	chr1	+	190	1	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAAAATAGCTAATT	NA	False	NA	NA	False	NA	NA	NA	28380260	28380450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_28380300_28380400
m54284U_201013_031047/39716552/ccs	chr17	+	168	1	Intergenic	novelGene_8582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGATTTTATAACTTTG	NA	False	NA	NA	False	NA	NA	NA	36398911	36399079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_36398900_36399100
m54284U_201013_031047/3999203/ccs	chr10	-	4234	3	ISM	ENSMUSG00000002578.19	ENSMUST00000133342.10	5150	8	9218	0	7875	0	3prime_fragment	FALSE	canonical	2	3	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTTTGTTCTTGAAGA	NA	False	NA	NA	False	AATAAA	-15	NA	128472642	128466711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_-_128470681_128471658_128471791_128472509
m54284U_201013_031047/4000146/ccs	chr19	+	211	1	Intergenic	novelGene_9094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCTAGAAACCATCTA	NA	False	NA	NA	False	NA	NA	NA	4975022	4975233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4975000_4975200
m54284U_201013_031047/40435830/ccs	chrX	+	106	1	Intergenic	novelGene_9487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATTATCCTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	63542414	63542520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_63542400_63542500
m54284U_201013_031047/40437392/ccs	chr3	+	185	1	Intergenic	novelGene_1575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAAAAGATCCCACTGG	1985	False	NA	NA	False	NA	NA	NA	95821305	95821490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95821300_95821500
m54284U_201013_031047/40504037/ccs	chr6	-	179	1	Intergenic	novelGene_3196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAACACTGGAACCTTCCT	4773	False	NA	NA	False	NA	NA	NA	38314978	38314799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38314800_38315000
m54284U_201013_031047/40698188/ccs	chr15	+	184	1	Intergenic	novelGene_7944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGATCCTTTAACTATAA	NA	False	NA	NA	False	NA	NA	NA	98611341	98611525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98611300_98611500
m54284U_201013_031047/40765511/ccs	chr17	-	1887	12	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-110	0	intron_retention	TRUE	canonical	3	23	junction_11	178.029016113982	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318398	57310404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_57310632_57310720_57310812_57310914_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318015_57318108
m54284U_201013_031047/41028175/ccs	chr12	+	2585	1	Intergenic	novelGene_6841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAACAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	99213881	99216466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_99213900_99216500
m54284U_201013_031047/41091703/ccs	chr11	+	5679	1	Intergenic	novelGene_6293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGCTCTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	97958417	97964096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97958400_97964100
m54284U_201013_031047/41092037/ccs	chr9	+	171	1	Intergenic	novelGene_5081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTAAGGGTGGTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	108159470	108159641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108159500_108159600
m54284U_201013_031047/41157344/ccs	chr17	+	775	1	Intergenic	novelGene_8353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6728752	6729527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_6728800_6729500
m54284U_201013_031047/4130214/ccs	chr18	+	201	1	Intergenic	novelGene_9016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACATGAAATCATA	NA	False	NA	NA	False	NA	NA	NA	74299541	74299742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_74299500_74299700
m54284U_201013_031047/4130542/ccs	chr15	-	3777	5	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	16287	junction_4	5903.99849678165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79962096_79962187_79964754_79965096_79965985_79966590_79966784_79967524
m54284U_201013_031047/41486092/ccs	chr8	+	187	1	Intergenic	novelGene_4545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCAGAACCTCCTTGG	NA	False	NA	NA	False	NA	NA	NA	120416982	120417169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_120417000_120417200
m54284U_201013_031047/41486687/ccs	chr8	+	2831	1	FSM	ENSMUSG00000064450.3	ENSMUST00000082516.3	86	1	-624	-2121	-624	2121	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829152	123831983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123829200_123832000
m54284U_201013_031047/41616585/ccs	chr11	+	7797	20	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	0	321	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	30.6010880982651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAGAGAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	117545638	117653411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_117546158_117591550_117591651_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
m54284U_201013_031047/41944835/ccs	chr6	-	184	1	Intergenic	novelGene_3291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	56025594	56025410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_56025400_56025600
m54284U_201013_031047/42207068/ccs	chr2	+	190	1	Intergenic	novelGene_911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTGCATGCTTCCAAG	6464	False	NA	NA	False	NA	NA	NA	88247868	88248058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_88247900_88248100
m54284U_201013_031047/42598500/ccs	chr1	-	191	1	Intergenic	novelGene_233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTACAAAGAACTCCATCT	NA	False	NA	NA	False	NA	NA	NA	86641954	86641763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_86641800_86642000
m54284U_201013_031047/42665783/ccs	chr7	+	177	1	Intergenic	novelGene_4168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTCTTAGCCATGGTG	3542	False	NA	NA	False	NA	NA	NA	140958544	140958721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140958500_140958700
m54284U_201013_031047/42730527/ccs	chr17	-	204	1	Intergenic	novelGene_8655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCCCTCCTCCCCCAA	NA	False	NA	-5	True	NA	NA	NA	56571705	56571501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_56571500_56571700
m54284U_201013_031047/42928370/ccs	chr15	-	210	1	Intergenic	novelGene_7682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTCCCATAATTTAGAT	NA	False	NA	NA	False	NA	NA	NA	37011228	37011018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_37011000_37011200
m54284U_201013_031047/43255321/ccs	chr14	-	3083	1	Intergenic	novelGene_7349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGGAAGATTGGGGT	NA	False	NA	NA	False	NA	NA	NA	21366595	21363512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_21363500_21366600
m54284U_201013_031047/4328099/ccs	chr6	+	161	1	Intergenic	novelGene_3184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATACACATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	37662772	37662933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_37662800_37662900
m54284U_201013_031047/43385590/ccs	chr5	+	197	1	Intergenic	novelGene_2581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTAGTGCGATGTATT	NA	False	NA	NA	False	NA	NA	NA	63803305	63803502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_63803300_63803500
m54284U_201013_031047/43647774/ccs	chr13	+	176	1	Intergenic	novelGene_7257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTTTTTTTTTAAAAAA	NA	False	NA	11	True	NA	NA	NA	97150532	97150708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97150500_97150700
m54284U_201013_031047/43649734/ccs	chrX	+	177	1	Intergenic	novelGene_9511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAATCTTACT	1679	False	NA	NA	False	NA	NA	NA	74262571	74262748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_74262600_74262700
m54284U_201013_031047/4391197/ccs	chr7	-	184	1	Intergenic	novelGene_3609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACAATCCAGTA	4660	False	NA	NA	False	NA	NA	NA	3285483	3285299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3285300_3285500
m54284U_201013_031047/44631333/ccs	chr8	+	209	1	Intergenic	novelGene_4251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAACAAACCCCAGAA	NA	False	NA	NA	False	NA	NA	NA	27746765	27746974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_27746800_27747000
m54284U_201013_031047/44695781/ccs	chr18	-	160	1	Intergenic	novelGene_8865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAGTCTACTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	34188680	34188520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34188500_34188700
m54284U_201013_031047/44761929/ccs	chr6	-	193	1	Intergenic	novelGene_3417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGATGAGACAGAGGGA	NA	False	NA	NA	False	NA	NA	NA	108148449	108148256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_108148300_108148400
m54284U_201013_031047/44826916/ccs	chr18	-	190	1	Intergenic	novelGene_8849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAGTCATGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	30428545	30428355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_30428400_30428500
m54284U_201013_031047/44893077/ccs	chr1	+	4616	1	Antisense	novelGene_ENSMUSG00000010453.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTATCTCAAGAAAAAAACA	9683	False	NA	NA	False	NA	NA	NA	36394175	36398791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_36394200_36398800
m54284U_201013_031047/45220125/ccs	chr10	-	163	1	Intergenic	novelGene_5280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAACGAGCGGAGCA	NA	False	NA	NA	False	NA	NA	NA	42515616	42515453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_42515500_42515600
m54284U_201013_031047/45287574/ccs	chr7	+	175	1	Intergenic	novelGene_3902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGCCTTGAACTCCTGA	5529	False	NA	NA	False	NA	NA	NA	79296096	79296271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79296100_79296300
m54284U_201013_031047/45613770/ccs	chr2	-	2192	10	NNC	ENSMUSG00000005882.19	novel	2413	10	NA	NA	0	-235	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	138.350601331866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGAGGTATGCGCCAC	NA	False	NA	NA	False	TATAAA	-24	NA	155771980	155689075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771888
m54284U_201013_031047/45746658/ccs	chr12	+	182	1	Intergenic	novelGene_6778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAATAAAATTCATAC	NA	False	NA	NA	False	NA	NA	NA	82466661	82466843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_82466700_82466800
m54284U_201013_031047/45812522/ccs	chr13	-	188	1	Antisense	novelGene_ENSMUSG00000113816.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAACAAGGGTCAAAGAG	NA	False	NA	NA	False	NA	NA	NA	64444770	64444582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_-_64444600_64444800
m54284U_201013_031047/45941398/ccs	chr2	+	175	1	Intergenic	novelGene_894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAACCTATT	NA	False	NA	NA	False	NA	NA	NA	83547698	83547873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_83547700_83547900
m54284U_201013_031047/45941925/ccs	chr18	-	177	1	Intergenic	novelGene_8840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACATA	NA	False	NA	NA	False	NA	NA	NA	22724284	22724107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_22724100_22724300
m54284U_201013_031047/45943024/ccs	chr5	-	233	1	Intergenic	novelGene_2939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTGGTTAAACTTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	129156732	129156499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129156500_129156700
m54284U_201013_031047/46006843/ccs	chr4	+	179	1	Intergenic	novelGene_2198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTGGAAAAAAA	7260	False	NA	NA	False	NA	NA	NA	132359032	132359211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132359000_132359200
m54284U_201013_031047/46072751/ccs	chr15	-	557	1	Antisense	novelGene_ENSMUSG00000001285.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTCAGCAAAGGTGGGG	6916	False	NA	NA	False	AAGAAA	-19	NA	102242174	102241617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_102241600_102242200
m54284U_201013_031047/46139502/ccs	chr15	-	188	1	Intergenic	novelGene_7856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTACTAACTGCCCTTCCA	5569	False	NA	NA	False	NA	NA	NA	81866330	81866142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81866100_81866300
m54284U_201013_031047/46204030/ccs	chr17	+	192	1	Intergenic	novelGene_8426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCATAGTAGCTACAAAT	NA	False	NA	NA	False	NA	NA	NA	26158298	26158490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_26158300_26158500
m54284U_201013_031047/46204500/ccs	chr4	+	4628	1	Genic_Genomic	ENSMUSG00000035572.17	novel	NA	NA	NA	NA	-12	-23763	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	-10	True	NA	NA	False	NA	NA	NA	45342088	45346716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_+_45342100_45346700
m54284U_201013_031047/46334149/ccs	chr4	+	143	1	Intergenic	novelGene_2378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTTTTAAAATGAAATTA	NA	False	NA	NA	False	NA	NA	NA	149205432	149205575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149205400_149205600
m54284U_201013_031047/46531689/ccs	chr18	+	190	1	Intergenic	novelGene_8921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATTCAGTCACAGAAGA	NA	False	NA	NA	False	NA	NA	NA	38008241	38008431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_38008200_38008400
m54284U_201013_031047/46664411/ccs	chr11	-	4390	1	Genic_Genomic	ENSMUSG00000020482.5	novel	NA	NA	NA	NA	11375	2464	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGGAACCGAGGCTTC	NA	False	NA	-2	True	AATAAA	-19	NA	5480812	5476422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_-_5476400_5480800
m54284U_201013_031047/46793341/ccs	chr2	+	179	1	Intergenic	novelGene_1207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATTCCTAGATGTTTCA	NA	False	NA	NA	False	NA	NA	NA	163358987	163359166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_163359000_163359200
m54284U_201013_031047/46858395/ccs	chr8	+	3943	1	Antisense	novelGene_ENSMUSG00000019731.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCTGGCAGGAGCAAG	NA	False	NA	NA	False	NA	NA	NA	73235479	73239422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_+_73235500_73239400
m54284U_201013_031047/46858416/ccs	chr13	-	98	1	Intergenic	novelGene_6959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAATAAAATCACACTG	NA	False	NA	NA	False	NA	NA	NA	9104715	9104617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_9104600_9104700
m54284U_201013_031047/47121218/ccs	chr3	-	169	1	Intergenic	novelGene_1372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	31111043	31110874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_31110900_31111000
m54284U_201013_031047/47187982/ccs	chr4	+	176	1	Intergenic	novelGene_1943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATATTTATTTT	NA	False	NA	NA	False	NA	NA	NA	99056269	99056445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_99056300_99056400
m54284U_201013_031047/47188027/ccs	chr2	-	174	1	Intergenic	novelGene_960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACCACTATATTCT	NA	False	NA	NA	False	NA	NA	NA	102293035	102292861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_102292900_102293000
m54284U_201013_031047/4720246/ccs	chr2	+	207	1	Intergenic	novelGene_749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGAAATTTTTAACAGT	8986	False	NA	NA	False	NA	NA	NA	34598639	34598846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34598600_34598800
m54284U_201013_031047/4721373/ccs	chr15	+	202	1	Intergenic	novelGene_7672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAGATATTTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	34305258	34305460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_34305300_34305500
m54284U_201013_031047/4721491/ccs	chr2	+	196	1	Intergenic	novelGene_1213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATTATATGTAA	NA	False	NA	NA	False	NA	NA	NA	164610738	164610934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_164610700_164610900
m54284U_201013_031047/47908272/ccs	chr9	+	201	1	Intergenic	novelGene_5077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATCTGTGGCAATAC	NA	False	NA	NA	False	NA	NA	NA	108129596	108129797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108129600_108129800
m54284U_201013_031047/48104592/ccs	chr2	+	197	1	Intergenic	novelGene_958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCCAGAGGAGTTTAGG	NA	False	NA	NA	False	NA	NA	NA	102031509	102031706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_102031500_102031700
m54284U_201013_031047/48168989/ccs	chr9	-	176	1	Intergenic	novelGene_5026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTCTCAGAAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	98613047	98612871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_98612900_98613000
m54284U_201013_031047/48236404/ccs	chr15	+	190	1	Intergenic	novelGene_7813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACATGGACTCCAAAGGT	NA	False	NA	NA	False	NA	NA	NA	79480202	79480392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_79480200_79480400
m54284U_201013_031047/48300709/ccs	chr3	+	293	1	Intergenic	novelGene_1415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTTTGAAAACTGTTA	NA	False	NA	NA	False	NA	NA	NA	58454288	58454581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_58454300_58454600
m54284U_201013_031047/48301148/ccs	chr17	+	240	1	Intergenic	novelGene_8609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTTTATCTTATGCAA	NA	False	NA	NA	False	AAGAAA	-5	NA	46092993	46093233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_46093000_46093200
m54284U_201013_031047/48302640/ccs	chr5	-	187	1	Intergenic	novelGene_3054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGTATAAGTAA	NA	False	NA	NA	False	NA	NA	NA	144305338	144305151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_144305200_144305300
m54284U_201013_031047/48433966/ccs	chr13	+	181	1	Intergenic	novelGene_7163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATGCAGATTCTCA	NA	False	NA	NA	False	NA	NA	NA	64387571	64387752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_64387600_64387800
m54284U_201013_031047/4849665/ccs	chr2	+	182	1	Intergenic	novelGene_1054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTTGAACTAACATCA	NA	False	NA	NA	False	NA	NA	NA	126988021	126988203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_126988000_126988200
m54284U_201013_031047/48498612/ccs	chr17	+	198	1	Intergenic	novelGene_8665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACCTACTCCCCCATGT	NA	False	NA	NA	False	NA	NA	NA	57584821	57585019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_57584800_57585000
m54284U_201013_031047/48628110/ccs	chr14	+	1051	1	Intergenic	novelGene_7431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTAACTTGAACACAACC	NA	False	NA	NA	False	NA	NA	NA	49845647	49846698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_49845600_49846700
m54284U_201013_031047/48957445/ccs	chr7	+	196	1	Intergenic	novelGene_3778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAATTCCAAGCCAT	NA	False	NA	NA	False	NA	NA	NA	29927988	29928184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29928000_29928200
m54284U_201013_031047/4915864/ccs	chr13	+	176	1	Intergenic	novelGene_7007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGGAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	30046167	30046343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_30046200_30046300
m54284U_201013_031047/49613468/ccs	chrX	+	201	1	Intergenic	novelGene_9456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGCTCTGCTTAAGTTC	NA	False	NA	NA	False	NA	NA	NA	50274856	50275057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_50274900_50275100
m54284U_201013_031047/49744393/ccs	chr9	-	179	1	Intergenic	novelGene_4661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAGACAAA	NA	False	NA	NA	False	NA	NA	NA	21325091	21324912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21324900_21325100
m54284U_201013_031047/4983222/ccs	chr13	+	169	1	Intergenic	novelGene_7041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAGCAAAACC	NA	False	NA	NA	False	NA	NA	NA	43735414	43735583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_43735400_43735600
m54284U_201013_031047/49875311/ccs	chr9	+	175	1	Intergenic	novelGene_4685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	30469892	30470067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_30469900_30470100
m54284U_201013_031047/49940858/ccs	chr2	+	108	1	FSM	ENSMUSG00000119211.1	ENSMUST00000239968.1	107	1	0	-1	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGGAACCCAGATGCC	NA	False	NA	NA	False	NA	NA	NA	141482409	141482517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_141482400_141482500
m54284U_201013_031047/5048750/ccs	chr8	+	193	1	Intergenic	novelGene_4443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCAAGCAGTTCACTGT	NA	False	NA	NA	False	NA	NA	NA	106523628	106523821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106523600_106523800
m54284U_201013_031047/50726286/ccs	chrX	-	816	1	FSM	ENSMUSG00000080241.4	ENSMUST00000116499.4	451	1	-98	-267	-98	267	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTTGAAAAAAAAAAAAGA	NA	False	NA	-1	True	AATAAA	-13	NA	36807848	36807032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_36807000_36807800
m54284U_201013_031047/50726797/ccs	chr17	-	2884	1	NIC	ENSMUSG00000024190.8	novel	1990	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCGTGCTTTCTTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	26727448	26724564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26724600_26727400
m54284U_201013_031047/50856945/ccs	chr2	-	171	1	Intergenic	novelGene_1287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATACATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	172317021	172316850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_172316800_172317000
m54284U_201013_031047/50988904/ccs	chr1	+	7012	1	Genic_Genomic	ENSMUSG00000041483.15	novel	NA	NA	NA	NA	1388	3247	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTACAAAATTTTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	136554026	136561038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_+_136554000_136561000
m54284U_201013_031047/51119023/ccs	chr2	+	173	1	Intergenic	novelGene_615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTAAAAAGTAGGTTT	NA	False	NA	NA	False	NA	NA	NA	20162153	20162326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_20162200_20162300
m54284U_201013_031047/51119933/ccs	chr12	+	5061	1	Genic_Genomic	ENSMUSG00000055884.9	novel	NA	NA	NA	NA	5731	3591	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGTCTTTTGACAC	NA	False	NA	NA	False	NA	NA	NA	65177362	65182423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_+_65177400_65182400
m54284U_201013_031047/5113754/ccs	chr4	+	232	1	Intergenic	novelGene_1741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACAGCTGATCAAAATT	9059	False	NA	NA	False	TTTAAA	-11	NA	11114455	11114687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_11114500_11114700
m54284U_201013_031047/51186334/ccs	chr6	-	181	1	Intergenic	novelGene_3594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATTTTGT	7174	False	NA	NA	False	NA	NA	NA	148982161	148981980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148982000_148982200
m54284U_201013_031047/51513981/ccs	chr16	+	5243	1	Intergenic	novelGene_8113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCTGTTTCTTGTG	NA	False	NA	8	True	NA	NA	NA	17829607	17834850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17829600_17834800
m54284U_201013_031047/51642614/ccs	chr17	+	187	1	Intergenic	novelGene_8369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAGTTCCAGGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	13152325	13152512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_13152300_13152500
m54284U_201013_031047/51774079/ccs	chr5	+	200	1	Intergenic	novelGene_2860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGAGATTCTACTTCT	3849	False	NA	NA	False	NA	NA	NA	121852878	121853078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_121852900_121853100
m54284U_201013_031047/51774281/ccs	chr7	+	176	1	Intergenic	novelGene_4078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTGTAGCCTGGAACTG	NA	False	NA	NA	False	NA	NA	NA	125886580	125886756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_125886600_125886800
m54284U_201013_031047/5177502/ccs	chr11	+	175	1	Intergenic	novelGene_6047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATTCTGAATAAC	4489	False	NA	NA	False	NA	NA	NA	77511810	77511985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77511800_77512000
m54284U_201013_031047/52036144/ccs	chr15	+	198	1	Intergenic	novelGene_7716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGATGTCCACACTGT	NA	False	NA	NA	False	NA	NA	NA	55112181	55112379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_55112200_55112400
m54284U_201013_031047/52037540/ccs	chr1	+	140	1	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	20853105	20853245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_20853100_20853200
m54284U_201013_031047/52824330/ccs	chr10	+	166	1	Intergenic	novelGene_5343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	62182897	62183063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62182900_62183100
m54284U_201013_031047/52824875/ccs	chr12	+	251	1	Intergenic	novelGene_6640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGTAACTGGGAGGAGT	NA	False	NA	NA	False	NA	NA	NA	54716266	54716517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_54716300_54716500
m54284U_201013_031047/52889223/ccs	chr12	-	4261	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	38.6595467334165	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATGATACGAGCCA	NA	False	NA	NA	False	AATAAA	-36	NA	21423540	21373517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21403883_21404015_21411659_21411793_21423336
m54284U_201013_031047/52890089/ccs	chr1	+	198	1	Intergenic	novelGene_420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCCTTTAGTTTTGATG	NA	False	NA	NA	False	NA	NA	NA	157254201	157254399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_157254200_157254400
m54284U_201013_031047/53412995/ccs	chr9	+	222	1	Intergenic	novelGene_5163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATTTCCCCCTAGAAG	NA	False	NA	NA	False	TTTAAA	-16	NA	123326671	123326893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_123326700_123326900
m54284U_201013_031047/53414429/ccs	chr17	+	185	1	Intergenic	novelGene_8699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTAAGAACTACATGGTA	NA	False	NA	NA	False	NA	NA	NA	71085347	71085532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71085300_71085500
m54284U_201013_031047/53478532/ccs	chr17	+	186	1	Intergenic	novelGene_8671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAGTGTATTATGGTTA	NA	False	NA	NA	False	NA	NA	NA	63820886	63821072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_63820900_63821100
m54284U_201013_031047/53544951/ccs	chrX	+	169	1	Intergenic	novelGene_9697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGAGTGGTAGG	NA	False	NA	NA	False	NA	NA	NA	156785333	156785502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_156785300_156785500
m54284U_201013_031047/53545268/ccs	chr19	+	178	1	Intergenic	novelGene_9341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACAAGCATCTTTAATT	NA	False	NA	NA	False	NA	NA	NA	53597990	53598168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_53598000_53598200
m54284U_201013_031047/53610193/ccs	chr6	+	1390	1	Intergenic	novelGene_3544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATCAAATAAAAAAAA	6827	False	NA	NA	False	NA	NA	NA	134421328	134422718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_134421300_134422700
m54284U_201013_031047/53676070/ccs	chr2	+	168	1	Intergenic	novelGene_747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGCAA	NA	False	NA	NA	False	NA	NA	NA	34483332	34483500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34483300_34483500
m54284U_201013_031047/5376643/ccs	chr4	+	208	1	Intergenic	novelGene_1884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAATACTGATCTGGT	NA	False	NA	NA	False	NA	NA	NA	59249161	59249369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_59249200_59249400
m54284U_201013_031047/53805649/ccs	chr4	+	203	1	Intergenic	novelGene_1944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTTTACACTAATTT	NA	False	NA	NA	False	NA	NA	NA	99075553	99075756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_99075600_99075800
m54284U_201013_031047/54331260/ccs	chr19	-	1689	1	FSM	ENSMUSG00000095690.3	ENSMUST00000178377.3	654	1	-53	-982	-53	982	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATCCCACTCTGCTGCCT	6551	False	NA	NA	False	NA	NA	NA	7376495	7374806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_7374800_7376500
m54284U_201013_031047/54397575/ccs	chr1	-	145	1	Intergenic	novelGene_497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATCCTTTACCTCA	NA	False	NA	NA	False	NA	NA	NA	178206692	178206547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_178206500_178206700
m54284U_201013_031047/5441045/ccs	chr1	+	228	1	Intergenic	novelGene_104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAGCTGAGCAAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	43160579	43160807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_43160600_43160800
m54284U_201013_031047/54461770/ccs	chr11	+	194	1	Intergenic	novelGene_5964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGAAGACATTAAAACAT	7895	False	NA	NA	False	NA	NA	NA	70518990	70519184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_70519000_70519200
m54284U_201013_031047/54591602/ccs	chr17	+	173	1	Intergenic	novelGene_8352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGAGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	6684023	6684196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_6684000_6684200
m54284U_201013_031047/54594389/ccs	chr7	+	159	1	Intergenic	novelGene_3932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAAGAGGATTATC	NA	False	NA	NA	False	NA	NA	NA	81391440	81391599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_81391400_81391600
m54284U_201013_031047/54722777/ccs	chr2	+	200	1	Intergenic	novelGene_730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTTTAGAGGCTGGAG	NA	False	NA	NA	False	TTTAAA	-3	NA	33042051	33042251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33042100_33042300
m54284U_201013_031047/54724164/ccs	chr7	-	182	1	Intergenic	novelGene_3782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAATGGATCAAGAGC	NA	False	NA	NA	False	NA	NA	NA	30377777	30377595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_30377600_30377800
m54284U_201013_031047/54789247/ccs	chr11	+	186	1	Intergenic	novelGene_6412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGGTGTGTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	107046789	107046975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107046800_107047000
m54284U_201013_031047/54856057/ccs	chr17	+	140	1	Intergenic	novelGene_8501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29875121	29875261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29875100_29875300
m54284U_201013_031047/55052877/ccs	chr12	+	236	1	Intergenic	novelGene_6894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTGTGAGTCTCTCC	NA	False	NA	NA	False	AATAAA	-41	NA	110458709	110458945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_110458700_110458900
m54284U_201013_031047/55247332/ccs	chr3	+	197	1	Intergenic	novelGene_1458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAACTTGCTGGTCTTAC	7339	False	NA	NA	False	NA	NA	NA	86024577	86024774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_86024600_86024800
m54284U_201013_031047/55248366/ccs	chr3	+	180	1	FSM	ENSMUSG00000106383.2	ENSMUST00000200640.2	1742	1	455	1107	455	-1107	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATACTGGTAAAACTATA	270	False	NA	NA	False	NA	NA	NA	95547069	95547249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_95547100_95547200
m54284U_201013_031047/55314679/ccs	chrX	+	170	1	Intergenic	novelGene_9440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	41147522	41147692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_41147500_41147700
m54284U_201013_031047/55771787/ccs	chr17	+	179	1	Intergenic	novelGene_8603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTATTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	45915526	45915705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_45915500_45915700
m54284U_201013_031047/55772954/ccs	chr7	-	176	1	Intergenic	novelGene_3627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATAAAGGGAGAA	NA	False	NA	NA	False	NA	NA	NA	4212576	4212400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_4212400_4212600
m54284U_201013_031047/55838089/ccs	chr3	+	175	1	Intergenic	novelGene_1663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAAGTAAACAA	NA	False	NA	NA	False	NA	NA	NA	122015804	122015979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_122015800_122016000
m54284U_201013_031047/55969956/ccs	chr6	+	207	1	Intergenic	novelGene_3516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTGTATTGTATCT	NA	False	NA	NA	False	TTTAAA	-4	NA	125390771	125390978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_125390800_125391000
m54284U_201013_031047/56164807/ccs	chr17	+	179	1	Intergenic	novelGene_8343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTGGAATGATATT	NA	False	NA	NA	False	NA	NA	NA	4102407	4102586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_4102400_4102600
m54284U_201013_031047/56166743/ccs	chr7	+	1605	1	FSM	ENSMUSG00000033585.6	ENSMUST00000038775.6	3694	1	1752	337	1752	-337	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATACTGTGAAATAATT	NA	False	NA	NA	False	AATAAA	-17	NA	61998068	61999673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_61998100_61999700
m54284U_201013_031047/56429317/ccs	chr6	+	4632	1	Intergenic	novelGene_3448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGGAAAAAAAATACATTAA	NA	False	NA	NA	False	NA	NA	NA	119984427	119989059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_119984400_119989100
m54284U_201013_031047/56494426/ccs	chr17	+	177	1	FSM	ENSMUSG00000117725.2	ENSMUST00000235695.2	6295	1	6115	3	5947	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGATTATGTTCTGTA	719	False	NA	NA	False	NA	NA	NA	30801388	30801565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_30801400_30801600
m54284U_201013_031047/56559011/ccs	chr1	+	183	1	Intergenic	novelGene_188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAAGGAACCTGA	NA	False	NA	NA	False	NA	NA	NA	74571780	74571963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74571800_74572000
m54284U_201013_031047/56560165/ccs	chr18	+	180	1	Intergenic	novelGene_8993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGATGGGTTTGTCAA	NA	False	NA	NA	False	NA	NA	NA	66357023	66357203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_66357000_66357200
m54284U_201013_031047/56885694/ccs	chr6	+	159	1	Intergenic	novelGene_3139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAAGGCCTTGTC	NA	False	NA	NA	False	NA	NA	NA	29790236	29790395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29790200_29790400
m54284U_201013_031047/5701673/ccs	chr9	+	273	1	Intergenic	novelGene_5035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACATGATCAAACCATG	624	False	NA	NA	False	AAAAAG	-29	NA	99576426	99576699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_99576400_99576700
m54284U_201013_031047/57017352/ccs	chr6	-	1796	1	Antisense	novelGene_ENSMUSG00000071226.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACCTAAATCTGTAACCC	NA	False	NA	NA	False	AAAACA	-6	NA	120713866	120712070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_120712100_120713900
m54284U_201013_031047/57541964/ccs	chr10	+	179	1	Intergenic	novelGene_5525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATCCATTTGATT	3665	False	NA	NA	False	NA	NA	NA	99310279	99310458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_99310300_99310500
m54284U_201013_031047/57543462/ccs	chr16	-	190	1	Intergenic	novelGene_8327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAAGGGCTCCACC	9290	False	NA	NA	False	NA	NA	NA	91397605	91397415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_91397400_91397600
m54284U_201013_031047/57607097/ccs	chr18	-	191	1	Intergenic	novelGene_8978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	61803972	61803781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_61803800_61804000
m54284U_201013_031047/57672500/ccs	chr19	-	191	1	Intergenic	novelGene_9308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGGTGCAAGGGTTGAA	1748	False	NA	NA	False	NA	NA	NA	46043789	46043598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_46043600_46043800
m54284U_201013_031047/57672856/ccs	chr2	+	211	1	Intergenic	novelGene_838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATAACCAAGGAACAGAA	6677	False	NA	NA	False	NA	NA	NA	69757197	69757408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69757200_69757400
m54284U_201013_031047/57868775/ccs	chr7	-	169	1	Intergenic	novelGene_3711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTTTAAAAATCATCAGG	8830	False	NA	NA	False	NA	NA	NA	25123653	25123484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_25123500_25123700
m54284U_201013_031047/57999604/ccs	chr11	+	4287	1	NIC	ENSMUSG00000034757.16	novel	1939	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTCTTTGTGACTGC	NA	False	NA	16	True	AATAAA	-18	NA	102175776	102180063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102175800_102180100
m54284U_201013_031047/58198512/ccs	chr2	+	188	1	Intergenic	novelGene_587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGGCGCTGAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	9905055	9905243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_9905100_9905200
m54284U_201013_031047/58327610/ccs	chr1	+	195	1	Intergenic	novelGene_377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGCAATGGAAAGTCCC	NA	False	NA	NA	False	NA	NA	NA	152186581	152186776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_152186600_152186800
m54284U_201013_031047/58329697/ccs	chr16	+	196	1	Intergenic	novelGene_8137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCCTGATTTGATTCAA	NA	False	NA	NA	False	NA	NA	NA	20170941	20171137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_20170900_20171100
m54284U_201013_031047/5834828/ccs	chr5	-	2511	5	NIC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	14	junction_4	359.544416588549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	False	NA	0	True	AATAAA	-17	NA	130284333	130274571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130284152_130284291
m54284U_201013_031047/58458778/ccs	chr3	+	155	1	Intergenic	novelGene_1689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATTGGAACAAAATACAT	NA	False	NA	NA	False	NA	NA	NA	132382129	132382284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_132382100_132382300
m54284U_201013_031047/58917495/ccs	chr6	+	135	1	Intergenic	novelGene_3334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73168021	73168156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_73168000_73168200
m54284U_201013_031047/58919507/ccs	chr6	+	2700	7	NNC	ENSMUSG00000007458.15	novel	2515	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	492.902768189517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTTGTCGTTTGTGCT	2943	False	NA	6	True	ATTAAA	-15	NA	122285957	122294639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_122286126_122289192_122289373_122290217_122290849_122292015_122292126_122292262_122292394_122293008_122293136_122293286
m54284U_201013_031047/58982841/ccs	chr16	+	214	1	Intergenic	novelGene_8091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACTAGATTTGCCAGAA	NA	False	NA	NA	False	NA	NA	NA	16362758	16362972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_16362800_16363000
m54284U_201013_031047/58984562/ccs	chr10	+	176	1	Intergenic	novelGene_5635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGC	1856	False	NA	NA	False	NA	NA	NA	128490957	128491133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128491000_128491100
m54284U_201013_031047/5900296/ccs	chr11	-	175	1	Intergenic	novelGene_5838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAAACAGTCT	8418	False	NA	NA	False	NA	NA	NA	53610245	53610070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_53610100_53610200
m54284U_201013_031047/59181440/ccs	chr8	+	173	2	Intergenic	novelGene_4489	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAATTAAAAAAAAAGC	279	False	NA	NA	False	NA	NA	NA	111582928	111584112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111582980_111583990
m54284U_201013_031047/59246160/ccs	chr7	+	180	1	Intergenic	novelGene_3809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGTTTAGAG	NA	False	NA	NA	False	NA	NA	NA	42189670	42189850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_42189700_42189800
m54284U_201013_031047/59247087/ccs	chr3	+	193	1	Antisense	novelGene_ENSMUSG00000106268.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	131078446	131078639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_131078400_131078600
m54284U_201013_031047/59310339/ccs	chr9	-	169	1	Intergenic	novelGene_4945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAACTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	73725392	73725223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_73725200_73725400
m54284U_201013_031047/59310751/ccs	chr11	+	172	1	Intergenic	novelGene_6013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTTAAAAAAAGTT	7273	False	NA	NA	False	NA	NA	NA	75540765	75540937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75540800_75540900
m54284U_201013_031047/59378502/ccs	chr5	+	178	1	Intergenic	novelGene_2651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTTAAAAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	88855474	88855652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_88855500_88855700
m54284U_201013_031047/59704430/ccs	chr16	+	188	1	Intergenic	novelGene_8198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTGGGTAAGACTTCA	NA	False	NA	NA	False	NA	NA	NA	31824943	31825131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31824900_31825100
m54284U_201013_031047/59834986/ccs	chr15	+	169	1	Intergenic	novelGene_7611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAATCTGCCAA	8027	False	NA	NA	False	NA	NA	NA	5274887	5275056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_5274900_5275100
m54284U_201013_031047/59836892/ccs	chr6	-	208	1	Intergenic	novelGene_3224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACTTCATAAGTGTAAT	NA	False	NA	NA	False	NA	NA	NA	39430291	39430083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39430100_39430300
m54284U_201013_031047/59900405/ccs	chr7	+	191	1	Intergenic	novelGene_3923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAAACAT	NA	False	NA	NA	False	NA	NA	NA	80484179	80484370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_80484200_80484400
m54284U_201013_031047/59966938/ccs	chr2	-	189	1	Intergenic	novelGene_1209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGACTCGTCCAAGGCCA	NA	False	NA	NA	False	NA	NA	NA	163883966	163883777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_163883800_163884000
m54284U_201013_031047/60230417/ccs	chr9	+	157	1	Intergenic	novelGene_4770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	53587664	53587821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_53587700_53587800
m54284U_201013_031047/60295121/ccs	chr11	+	179	1	Intergenic	novelGene_6247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATATATATATATA	8052	False	NA	NA	False	NA	NA	NA	95981206	95981385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95981200_95981400
m54284U_201013_031047/6031064/ccs	chr6	+	96	1	Intergenic	novelGene_3426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAATAAAATATT	NA	False	NA	NA	False	NA	NA	NA	114891673	114891769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_114891700_114891800
m54284U_201013_031047/60359344/ccs	chr2	+	176	2	Intergenic	novelGene_706	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	9	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8139	False	NA	NA	False	NA	NA	NA	31624736	31966583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_31624786_31966456
m54284U_201013_031047/60622082/ccs	chr4	+	154	1	Intergenic	novelGene_2022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116497366	116497520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116497400_116497500
m54284U_201013_031047/60623567/ccs	chr11	+	197	1	Intergenic	novelGene_5993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATGTGATCTTAACAG	NA	False	NA	NA	False	NA	NA	NA	74745871	74746068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74745900_74746100
m54284U_201013_031047/60752375/ccs	chr17	+	195	1	Intergenic	novelGene_8751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATTAGTCTGAACAG	NA	False	NA	NA	False	NA	NA	NA	82023649	82023844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_82023600_82023800
m54284U_201013_031047/60752962/ccs	chr16	+	249	1	Intergenic	novelGene_8128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATATATGCAGCTAGAG	NA	False	NA	NA	False	NA	NA	NA	18660899	18661148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18660900_18661100
m54284U_201013_031047/60817985/ccs	chr9	+	178	1	Intergenic	novelGene_4704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTTTAATTAA	NA	False	NA	NA	False	NA	NA	NA	36391596	36391774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_36391600_36391800
m54284U_201013_031047/60818350/ccs	chr10	-	187	1	Intergenic	novelGene_5586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTTTAGGATTTTGAT	NA	False	NA	NA	False	NA	NA	NA	121382038	121381851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_121381900_121382000
m54284U_201013_031047/60884274/ccs	chr4	+	157	1	Intergenic	novelGene_2057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATAAATATTTTTT	NA	False	NA	NA	False	NA	NA	NA	118873235	118873392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_118873200_118873400
m54284U_201013_031047/60948761/ccs	chr13	+	177	1	Intergenic	novelGene_7115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGTCCA	NA	False	NA	NA	False	NA	NA	NA	56207899	56208076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_56207900_56208100
m54284U_201013_031047/6095696/ccs	chr14	+	156	1	Intergenic	novelGene_7504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAAACAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	61782349	61782505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_61782300_61782500
m54284U_201013_031047/61082331/ccs	chr12	+	176	1	Intergenic	novelGene_6774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	81877432	81877608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_81877400_81877600
m54284U_201013_031047/61211995/ccs	chr7	-	633	3	NNC	ENSMUSG00000030717.10	novel	829	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_2	1861.5	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGGCGTGTGTTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	126224647	126222420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126222752_126224061_126224206_126224489
m54284U_201013_031047/61409756/ccs	chr8	+	190	1	Intergenic	novelGene_4302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCGAATTTCAGACAGA	NA	False	NA	NA	False	NA	NA	NA	61530686	61530876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_61530700_61530900
m54284U_201013_031047/61669744/ccs	chr17	-	175	1	Intergenic	novelGene_8687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTCATCATCTCT	NA	False	NA	NA	False	NA	NA	NA	66783992	66783817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66783800_66784000
m54284U_201013_031047/61867737/ccs	chr3	+	154	1	Intergenic	novelGene_1362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	21976246	21976400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_21976200_21976400
m54284U_201013_031047/61999185/ccs	chr12	+	186	1	Intergenic	novelGene_6924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATCAGTACTGTCCC	8395	False	NA	NA	False	NA	NA	NA	111582911	111583097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111582900_111583100
m54284U_201013_031047/62260855/ccs	chr14	+	1016	1	Intergenic	novelGene_7509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGTCCATGTTAACCT	NA	False	NA	NA	False	AATATA	-42	NA	63744600	63745616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_63744600_63745600
m54284U_201013_031047/62324990/ccs	chr13	+	303	1	Intergenic	novelGene_7093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCATGTACTTAG	NA	False	NA	NA	False	NA	NA	NA	55354020	55354323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55354000_55354300
m54284U_201013_031047/62655210/ccs	chr2	-	163	1	Intergenic	novelGene_1321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	180632114	180631951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_180632000_180632100
m54284U_201013_031047/62720737/ccs	chr7	+	206	1	Intergenic	novelGene_3943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTCAAACAGGGCAGGA	NA	False	NA	NA	False	NA	NA	NA	88877921	88878127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_88877900_88878100
m54284U_201013_031047/62783916/ccs	chr10	+	184	1	Intergenic	novelGene_5261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCTGATACTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	39055394	39055578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_39055400_39055600
m54284U_201013_031047/62785351/ccs	chr4	+	197	1	Intergenic	novelGene_2381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTTTCTGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	149273345	149273542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149273300_149273500
m54284U_201013_031047/63176773/ccs	chr4	+	190	1	Intergenic	novelGene_1902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAATCTAGATGTCTGC	NA	False	NA	NA	False	NA	NA	NA	72125885	72126075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_72125900_72126100
m54284U_201013_031047/63507206/ccs	chr2	-	191	1	Intergenic	novelGene_1329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGGCATGGCTGAGAAC	6485	False	NA	NA	False	NA	NA	NA	181235549	181235358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181235400_181235500
m54284U_201013_031047/63637840/ccs	chr13	+	4741	1	Intergenic	novelGene_7220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAACGGTCTGAGAAAAT	585	False	NA	NA	False	NA	NA	NA	81784759	81789500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_81784800_81789500
m54284U_201013_031047/64095859/ccs	chr13	-	175	1	Intergenic	novelGene_7195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAATAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	68582715	68582540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_68582500_68582700
m54284U_201013_031047/64356396/ccs	chr5	+	191	2	Intergenic	novelGene_2780	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1622	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGGCTGGACCAGCCTCA	NA	False	NA	NA	False	NA	NA	NA	113791675	113949504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_113791726_113949363
m54284U_201013_031047/64489657/ccs	chr5	-	169	1	Intergenic	novelGene_2649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAATGAATA	NA	False	NA	NA	False	NA	NA	NA	88834971	88834802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_88834800_88835000
m54284U_201013_031047/64619941/ccs	chr5	-	200	1	Intergenic	novelGene_3043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGGAAAGAGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	143091357	143091157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_143091200_143091400
m54284U_201013_031047/64621105/ccs	chrX	-	3267	1	FSM	ENSMUSG00000096966.3	ENSMUST00000180787.3	2298	1	280	-1249	280	1249	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTGTCTCACCACTTC	NA	False	NA	-3	True	AATAAA	-15	NA	72442062	72438795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_72438800_72442100
m54284U_201013_031047/64684335/ccs	chr1	-	201	1	Intergenic	novelGene_166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGTGAAAAACCACCAT	NA	False	NA	NA	False	NA	NA	NA	64789762	64789561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_64789600_64789800
m54284U_201013_031047/64685325/ccs	chr12	+	141	1	Intergenic	novelGene_6936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAATTAAATATAT	5208	False	NA	NA	False	NA	NA	NA	113138726	113138867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_113138700_113138900
m54284U_201013_031047/64751357/ccs	chr19	-	194	1	Intergenic	novelGene_9159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTCACAAGTTTGAGGAC	NA	False	NA	NA	False	NA	NA	NA	10135853	10135659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_10135700_10135900
m54284U_201013_031047/64751583/ccs	chr3	+	182	1	Intergenic	novelGene_1413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGGCTGTAGGTTTGGG	NA	False	NA	NA	False	NA	NA	NA	55477705	55477887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_55477700_55477900
m54284U_201013_031047/64946214/ccs	chr2	+	177	1	Intergenic	novelGene_942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGATTTAT	1443	False	NA	NA	False	NA	NA	NA	91965317	91965494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91965300_91965500
m54284U_201013_031047/64948168/ccs	chr8	+	177	1	Intergenic	novelGene_4522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGACCTCTAGCCTAGAG	NA	False	NA	NA	False	NA	NA	NA	112823282	112823459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112823300_112823500
m54284U_201013_031047/65077712/ccs	chr7	+	196	1	Antisense	novelGene_ENSMUSG00000011382.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTCGGCCTCAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	45122632	45122828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_45122600_45122800
m54284U_201013_031047/65472976/ccs	chr8	+	1590	1	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGGCTGGAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	112729457	112731047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_+_112729500_112731000
m54284U_201013_031047/6555867/ccs	chr5	-	178	1	Intergenic	novelGene_2526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCCTAATAGT	1317	False	NA	NA	False	NA	NA	NA	32784311	32784133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_32784100_32784300
m54284U_201013_031047/65667225/ccs	chrX	+	177	1	Intergenic	novelGene_9536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	93173102	93173279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_93173100_93173300
m54284U_201013_031047/657993/ccs	chr2	+	103	1	Intergenic	novelGene_1079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATTCACTTGCTTGC	4225	False	NA	NA	False	NA	NA	NA	132098956	132099059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_132099000_132099100
m54284U_201013_031047/65864111/ccs	chr8	+	337	1	Intergenic	novelGene_4336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAATAAAACAT	NA	False	NA	NA	False	AATAAA	-2	NA	73031871	73032208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_73031900_73032200
m54284U_201013_031047/65940/ccs	chr12	-	180	1	Intergenic	novelGene_6844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTATTTATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	99463262	99463082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_99463100_99463300
m54284U_201013_031047/66194190/ccs	chr13	+	174	1	Intergenic	novelGene_7306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAATAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	112133959	112134133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_112134000_112134100
m54284U_201013_031047/66259623/ccs	chr3	-	3026	14	NIC	ENSMUSG00000028134.12	novel	3364	14	NA	NA	-123	-476	combination_of_known_junctions	FALSE	canonical	3	6	junction_6	23.8597975856545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATTTATTTGAACAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	119577160	119512866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_119514110_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
m54284U_201013_031047/66849150/ccs	chr2	+	175	1	Intergenic	novelGene_853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAAAAGAATAGTG	NA	False	NA	NA	False	NA	NA	NA	71903188	71903363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_71903200_71903400
m54284U_201013_031047/6686997/ccs	chr8	+	176	1	Intergenic	novelGene_4337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	73052048	73052224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_73052000_73052200
m54284U_201013_031047/66914914/ccs	chr12	+	166	1	Intergenic	novelGene_6743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	78603107	78603273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_78603100_78603300
m54284U_201013_031047/67176720/ccs	chr11	-	176	1	Intergenic	novelGene_6076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAATTATTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	78895606	78895430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_78895400_78895600
m54284U_201013_031047/67240580/ccs	chrX	+	187	1	Intergenic	novelGene_9703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCATCCATTGTTTGGC	NA	False	NA	NA	False	NA	NA	NA	158287231	158287418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_158287200_158287400
m54284U_201013_031047/67307201/ccs	chr15	+	309	1	Intergenic	novelGene_7855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	81849644	81849953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81849600_81850000
m54284U_201013_031047/67503708/ccs	chr8	-	4990	1	Genic_Genomic	ENSMUSG00000035569.18	novel	NA	NA	NA	NA	-4687	2640	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCACTGTGAGAAAACAC	NA	False	NA	NA	False	NA	NA	NA	123635151	123630161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_-_123630200_123635200
m54284U_201013_031047/6750845/ccs	chr16	+	187	1	Intergenic	novelGene_8136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACACAACTTAAGCTTTA	NA	False	NA	NA	False	NA	NA	NA	20165111	20165298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_20165100_20165300
m54284U_201013_031047/6751703/ccs	chr7	-	179	1	Intergenic	novelGene_4180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	143465851	143465672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_143465700_143465900
m54284U_201013_031047/67830239/ccs	chr8	+	187	1	Intergenic	novelGene_4384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGCCTGACACAAAACCA	NA	False	NA	NA	False	NA	NA	NA	86111759	86111946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_86111800_86111900
m54284U_201013_031047/67963294/ccs	chr17	+	186	1	Intergenic	novelGene_8586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGACGGGTTTGTAAA	NA	False	NA	NA	False	NA	NA	NA	37244394	37244580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_37244400_37244600
m54284U_201013_031047/68225398/ccs	chr9	+	224	1	Intergenic	novelGene_4954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTATTGCTGCAATAAA	NA	False	NA	NA	False	NA	NA	NA	75962880	75963104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_75962900_75963100
m54284U_201013_031047/68420356/ccs	chr3	-	4700	1	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	52796	796	10922	-796	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAAAACAAGGATTTT	8329	False	NA	NA	False	NA	NA	NA	95673148	95668448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_-_95668400_95673100
m54284U_201013_031047/68747400/ccs	chr2	+	2299	10	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	75	junction_8	747.958555001546	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116349	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120079_130120211_130120816
m54284U_201013_031047/6881985/ccs	chr1	+	179	1	Intergenic	novelGene_151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60200122	60200301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_60200100_60200300
m54284U_201013_031047/68946491/ccs	chr8	-	114	1	Intergenic	novelGene_4256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGTGCCCAGGAAAGAGGT	NA	False	NA	NA	False	NA	NA	NA	31657866	31657752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_31657800_31657900
m54284U_201013_031047/69010750/ccs	chr19	+	183	1	Intergenic	novelGene_9156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACAACC	4408	False	NA	NA	False	NA	NA	NA	9989513	9989696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_9989500_9989700
m54284U_201013_031047/69077654/ccs	chr7	+	188	1	Intergenic	novelGene_4024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGTTCCTCAGCAAAA	7078	False	NA	NA	False	NA	NA	NA	109805753	109805941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109805800_109805900
m54284U_201013_031047/69142417/ccs	chr4	+	182	1	Intergenic	novelGene_2217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTTTTTTTTTTAAA	1347	False	NA	NA	False	NA	NA	NA	133187040	133187222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133187000_133187200
m54284U_201013_031047/69339981/ccs	chr2	+	490	1	FSM	ENSMUSG00000082580.4	ENSMUST00000122241.2	312	1	-11	-167	-11	167	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAACCAGGAAGCAA	1039	False	NA	NA	False	NA	NA	NA	3551782	3552272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_3551800_3552300
m54284U_201013_031047/69468249/ccs	chr12	+	189	1	Intergenic	novelGene_6733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCCTTATAAGAGTTGC	NA	False	NA	NA	False	NA	NA	NA	76560610	76560799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_76560600_76560800
m54284U_201013_031047/69862838/ccs	chr19	-	138	1	Intergenic	novelGene_9137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCAGAGCAAGCAGGGAC	10009	False	NA	NA	False	NA	NA	NA	7196272	7196134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7196100_7196300
m54284U_201013_031047/69863010/ccs	chr12	+	167	1	Intergenic	novelGene_6880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAGTAAGGTGGATTA	NA	False	NA	NA	False	NA	NA	NA	105932654	105932821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105932700_105932800
m54284U_201013_031047/70058077/ccs	chr17	-	182	1	Antisense	novelGene_ENSMUSG00000004864.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTATTTTCTTCAGGGCT	8740	False	NA	NA	False	NA	NA	NA	28999373	28999191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_28999200_28999400
m54284U_201013_031047/70124277/ccs	chr3	-	177	1	Intergenic	novelGene_1546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATCTGAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	90418048	90417871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90417900_90418000
m54284U_201013_031047/70191152/ccs	chr18	+	182	1	Intergenic	novelGene_9030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTACATTTTAAATTTA	4689	False	NA	NA	False	NA	NA	NA	77190791	77190973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_77190800_77191000
m54284U_201013_031047/70320945/ccs	chr7	+	137	1	Intergenic	novelGene_3768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	29732009	29732146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29732000_29732100
m54284U_201013_031047/70647818/ccs	chr11	-	253	1	Intergenic	novelGene_5785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTTTTGCTTTTTGTTT	5762	False	NA	NA	False	NA	NA	NA	44490540	44490287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_44490300_44490500
m54284U_201013_031047/70650263/ccs	chr11	+	201	1	Intergenic	novelGene_6209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAACAGCCTTTTAGTAT	NA	False	NA	NA	False	NA	NA	NA	94198161	94198362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94198200_94198400
m54284U_201013_031047/70713551/ccs	chr2	+	175	1	Intergenic	novelGene_1024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	121221905	121222080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121221900_121222100
m54284U_201013_031047/7078729/ccs	chr10	-	157	1	Intergenic	novelGene_5309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	59117213	59117056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_59117100_59117200
m54284U_201013_031047/70912333/ccs	chr7	+	177	2	Intergenic	novelGene_3850	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	175	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTTTTATTTCAT	4004	False	NA	NA	False	NA	NA	NA	46426674	46457597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_46426725_46457470
m54284U_201013_031047/71043367/ccs	chr7	+	194	1	Intergenic	novelGene_3653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTGTCTCAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	12687806	12688000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_12687800_12688000
m54284U_201013_031047/71434540/ccs	chr10	+	177	1	Intergenic	novelGene_5477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGAAGAAGAAGCCACT	NA	False	NA	NA	False	NA	NA	NA	83143816	83143993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_83143800_83144000
m54284U_201013_031047/71567830/ccs	chr9	-	185	1	Intergenic	novelGene_4966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATTCTTTAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	78298136	78297951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_78298000_78298100
m54284U_201013_031047/71631342/ccs	chr17	+	181	1	Intergenic	novelGene_8725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAATCAGTTGATCAGC	NA	False	NA	NA	False	NA	NA	NA	74767070	74767251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_74767100_74767300
m54284U_201013_031047/71631778/ccs	chr12	+	188	1	Intergenic	novelGene_6808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATTGACAAGTAGCT	NA	False	NA	NA	False	NA	NA	NA	85061011	85061199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_85061000_85061200
m54284U_201013_031047/71633319/ccs	chr1	+	177	1	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGCTGTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34985332	34985509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_34985300_34985500
m54284U_201013_031047/71698458/ccs	chr3	+	3233	1	Intergenic	novelGene_1560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGGTCCTCAGCAAAGC	3338	False	NA	NA	False	NA	NA	NA	94936442	94939675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_94936400_94939700
m54284U_201013_031047/71960395/ccs	chr1	+	1292	1	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAATGGACACACA	NA	False	NA	NA	False	NA	NA	NA	10299731	10301023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_10299700_10301000
m54284U_201013_031047/72024350/ccs	chr4	+	190	1	Intergenic	novelGene_1777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTTAACTATATATTAA	NA	False	NA	NA	False	NA	NA	NA	31983462	31983652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_31983500_31983700
m54284U_201013_031047/72155572/ccs	chr11	+	180	1	Intergenic	novelGene_5941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAGAAGGAAAGGAA	5599	False	NA	NA	False	NA	NA	NA	69079025	69079205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69079000_69079200
m54284U_201013_031047/72418463/ccs	chr5	+	190	1	Intergenic	novelGene_2525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATCAGCACAGTTGTT	NA	False	NA	NA	False	AATAAA	-28	NA	32778779	32778969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_32778800_32779000
m54284U_201013_031047/72418708/ccs	chr6	+	206	1	Intergenic	novelGene_3319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCAACCCTTCTGCAGTA	NA	False	NA	NA	False	AAAACA	-6	NA	71387774	71387980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_71387800_71388000
m54284U_201013_031047/72680963/ccs	chr5	-	175	1	Intergenic	novelGene_2627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAAAAGACG	NA	False	NA	NA	False	NA	NA	NA	77055400	77055225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77055200_77055400
m54284U_201013_031047/72810871/ccs	chr5	+	181	1	Intergenic	novelGene_2932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATTCAGGAGT	NA	False	NA	NA	False	NA	NA	NA	128304253	128304434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_128304300_128304400
m54284U_201013_031047/72811986/ccs	chr5	+	187	1	Intergenic	novelGene_2659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTAAGGTCTCTGGCAG	2883	False	NA	NA	False	NA	NA	NA	92140840	92141027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92140800_92141000
m54284U_201013_031047/73139489/ccs	chr11	+	176	1	Intergenic	novelGene_5669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	5183	False	NA	NA	False	NA	NA	NA	4709855	4710031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4709900_4710000
m54284U_201013_031047/73140617/ccs	chr11	+	208	1	Intergenic	novelGene_5804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATCTTTGGAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	50286947	50287155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_50286900_50287200
m54284U_201013_031047/73203838/ccs	chr10	+	194	1	Intergenic	novelGene_5299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGTGGAATTTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	55003352	55003546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_55003400_55003500
m54284U_201013_031047/73206294/ccs	chr4	-	208	1	Intergenic	novelGene_2030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTTTTTTTGTTTTTTA	9998	False	NA	NA	False	NA	NA	NA	116656778	116656570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116656600_116656800
m54284U_201013_031047/73401455/ccs	chr17	-	166	1	Intergenic	novelGene_8585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTGTTAAATGAGAC	NA	False	NA	NA	False	NA	NA	NA	37213465	37213299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_37213300_37213500
m54284U_201013_031047/73665016/ccs	chr15	+	1092	1	Intergenic	novelGene_7922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAAACTTTCCCTTCGA	NA	False	NA	NA	False	NA	NA	NA	96485102	96486194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_96485100_96486200
m54284U_201013_031047/73728086/ccs	chr4	+	174	1	Intergenic	novelGene_2415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAACTGTTGTCC	NA	False	NA	NA	False	NA	NA	NA	153175301	153175475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_153175300_153175500
m54284U_201013_031047/74187124/ccs	chr13	+	185	1	Intergenic	novelGene_7030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAGAACAGAAATCAAG	NA	False	NA	NA	False	NA	NA	NA	41069059	41069244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_41069100_41069200
m54284U_201013_031047/74581761/ccs	chr2	+	186	1	Intergenic	novelGene_1144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACAGACTGAGCGAGCC	NA	False	NA	NA	False	NA	NA	NA	154421761	154421947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154421800_154421900
m54284U_201013_031047/74582198/ccs	chr16	-	196	1	Intergenic	novelGene_8114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTTCCTTTTTTATTT	NA	False	NA	NA	False	NA	NA	NA	18113207	18113011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18113000_18113200
m54284U_201013_031047/74648255/ccs	chr4	+	186	1	Intergenic	novelGene_1948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTAAGGGTGTTTGC	NA	False	NA	NA	False	NA	NA	NA	99537447	99537633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_99537400_99537600
m54284U_201013_031047/74777756/ccs	chr1	-	172	1	Intergenic	novelGene_125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAACATT	NA	False	NA	NA	False	NA	NA	NA	54987452	54987280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_54987300_54987500
m54284U_201013_031047/74974116/ccs	chr18	+	3448	1	Intergenic	novelGene_8859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGGGTTTGGTGTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	32238163	32241611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_32238200_32241600
m54284U_201013_031047/75040922/ccs	chr9	-	177	1	Intergenic	novelGene_4755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	49002615	49002438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_49002400_49002600
m54284U_201013_031047/75107068/ccs	chr11	+	196	1	Intergenic	novelGene_6313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCCAGAAGCGAGAGGC	NA	False	NA	NA	False	NA	NA	NA	99102115	99102311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_99102100_99102300
m54284U_201013_031047/75235941/ccs	chr1	+	184	1	Intergenic	novelGene_485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAACCTCTACCAGGG	NA	False	NA	NA	False	NA	NA	NA	172255071	172255255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_172255100_172255300
m54284U_201013_031047/75237123/ccs	chr19	+	180	1	Intergenic	novelGene_9226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAAAGTAGAAA	NA	False	NA	NA	False	NA	NA	NA	34863973	34864153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_34864000_34864200
m54284U_201013_031047/7536858/ccs	chr14	+	170	1	Intergenic	novelGene_7372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAGCCCAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	26735097	26735267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_26735100_26735300
m54284U_201013_031047/75498416/ccs	chr4	+	3534	27	NNC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_18	328.811417418635	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	503	False	NA	8	True	AATAAA	-20	NA	137321450	137383642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362212_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201013_031047/75499238/ccs	chr12	-	177	1	Intergenic	novelGene_6576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATCTGTAACT	NA	False	NA	NA	False	NA	NA	NA	17586229	17586052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_17586100_17586200
m54284U_201013_031047/75564725/ccs	chr17	+	179	1	Intergenic	novelGene_8778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAGAAGAAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	88393824	88394003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_88393800_88394000
m54284U_201013_031047/75565673/ccs	chr11	-	134	1	Intergenic	novelGene_5760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGGAGACAGGAAA	3740	False	NA	NA	False	NA	NA	NA	30252306	30252172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_30252200_30252300
m54284U_201013_031047/75631027/ccs	chr8	-	185	1	Intergenic	novelGene_4601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAACAACT	NA	False	NA	NA	False	NA	NA	NA	125322742	125322557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_125322600_125322700
m54284U_201013_031047/75694449/ccs	chr1	+	173	1	Intergenic	novelGene_405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	156232117	156232290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156232100_156232300
m54284U_201013_031047/75695491/ccs	chr5	-	1929	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	73	junction_4	384.450724248245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650236	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
m54284U_201013_031047/75696435/ccs	chr18	+	5286	1	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	0	-81264	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53995193	54000479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_53995200_54000500
m54284U_201013_031047/75891843/ccs	chr2	-	182	1	Intergenic	novelGene_987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGGAGAGGAATGG	NA	False	NA	NA	False	NA	NA	NA	112342643	112342461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_112342500_112342600
m54284U_201013_031047/76023624/ccs	chr13	-	169	1	Intergenic	novelGene_7292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTAAAAAAAGTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	107078011	107077842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_107077800_107078000
m54284U_201013_031047/76350016/ccs	chr2	-	3277	23	NIC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	15.0360448465712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGCCCCGTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	27317045	27159592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27171912_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
m54284U_201013_031047/7669149/ccs	chr2	+	187	1	Intergenic	novelGene_677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCAGGGGCATCACCTAT	NA	False	NA	NA	False	NA	NA	NA	30045951	30046138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30046000_30046100
m54284U_201013_031047/7670264/ccs	chr10	+	152	1	Intergenic	novelGene_5582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGTGGGACCAG	NA	False	NA	NA	False	NA	NA	NA	121235340	121235492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_121235300_121235500
m54284U_201013_031047/76940142/ccs	chr19	-	202	1	Intergenic	novelGene_9359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGCAAGTACAGG	9962	False	NA	NA	False	NA	NA	NA	60864604	60864402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_60864400_60864600
m54284U_201013_031047/77070420/ccs	chr6	+	192	1	Intergenic	novelGene_3284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAGCTGAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	54560893	54561085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_54560900_54561100
m54284U_201013_031047/77071810/ccs	chr13	-	172	1	Intergenic	novelGene_7084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTTTTTCGAGACAG	NA	False	NA	-2	True	NA	NA	NA	54822383	54822211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_54822200_54822400
m54284U_201013_031047/77137592/ccs	chr13	+	171	1	Intergenic	novelGene_7238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATGGACAGGCTT	NA	False	NA	NA	False	NA	NA	NA	93700060	93700231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_93700100_93700200
m54284U_201013_031047/77529873/ccs	chr1	-	176	1	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	7321	False	NA	NA	False	NA	NA	NA	38053267	38053091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_38053100_38053300
m54284U_201013_031047/77594820/ccs	chr6	-	182	1	Intergenic	novelGene_3531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTCATTCATTC	7988	False	NA	NA	False	NA	NA	NA	128484203	128484021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128484000_128484200
m54284U_201013_031047/77922520/ccs	chr19	+	172	1	Intergenic	novelGene_9096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	5127561	5127733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_5127600_5127700
m54284U_201013_031047/7799323/ccs	chr8	+	4878	1	ISM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	79087	0	78688	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATTGTCTCTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	107741468	107746346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_107741500_107746300
m54284U_201013_031047/78053581/ccs	chr10	+	185	1	Intergenic	novelGene_5198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAATCTTAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	12840626	12840811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_12840600_12840800
m54284U_201013_031047/78119360/ccs	chr19	-	153	1	Intergenic	novelGene_9279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATAAATAAATAAATCT	3239	False	NA	NA	False	NA	NA	NA	44228441	44228288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_44228300_44228400
m54284U_201013_031047/78121104/ccs	chr1	-	222	1	Intergenic	novelGene_164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGCTGAGTAGTATTC	NA	False	NA	NA	False	NA	NA	NA	63813464	63813242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_63813200_63813500
m54284U_201013_031047/78315716/ccs	chr5	+	4602	1	Intergenic	novelGene_2492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGCTTGTTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	25704867	25709469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_25704900_25709500
m54284U_201013_031047/7866978/ccs	chr7	+	263	1	Intergenic	novelGene_3607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATATAGAGAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	3272710	3272973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3272700_3273000
m54284U_201013_031047/78708794/ccs	chr11	-	2666	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26093	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	181.519172541084	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	NA	False	NA	-2	True	AATAAA	-19	NA	113482698	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113482607
m54284U_201013_031047/78776079/ccs	chr12	-	3663	1	ISM	ENSMUSG00000033713.13	ENSMUST00000046859.12	7705	6	197287	2770	94767	2246	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTTTGTTTTTTTG	9651	False	NA	-5	True	ATTAAA	-20	NA	99162769	99159106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_-_99159100_99162800
m54284U_201013_031047/79233287/ccs	chr9	+	203	1	Intergenic	novelGene_4841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTGTTAGTTGAGCA	NA	False	NA	NA	False	NA	NA	NA	62233712	62233915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_62233700_62233900
m54284U_201013_031047/79235535/ccs	chr4	-	211	1	Intergenic	novelGene_2419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGGCTAAGGAGGGTC	NA	False	NA	NA	False	NA	NA	NA	154969120	154968909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_154968900_154969100
m54284U_201013_031047/79300475/ccs	chr8	+	172	1	Intergenic	novelGene_4311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69539275	69539447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_69539300_69539400
m54284U_201013_031047/79300608/ccs	chr5	-	2778	9	NNC	ENSMUSG00000029603.16	novel	4035	10	NA	NA	-1092	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	41.4123698307643	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120834560	120818267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125_120821188_120821359_120821522_120821751_120821814_120832474_120833178_120834452
m54284U_201013_031047/79300767/ccs	chr3	-	191	1	Intergenic	novelGene_1412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTAAAAACATGAAATCG	NA	False	NA	NA	False	NA	NA	NA	54691170	54690979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_54691000_54691200
m54284U_201013_031047/7930356/ccs	chr2	+	188	1	Intergenic	novelGene_775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGGCTGCTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	38740974	38741162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_38741000_38741200
m54284U_201013_031047/7932543/ccs	chr5	+	204	1	Intergenic	novelGene_3044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTTAGTGGGCAGTAGC	NA	False	NA	NA	False	NA	NA	NA	143091865	143092069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_143091900_143092100
m54284U_201013_031047/79562645/ccs	chr5	+	170	1	Intergenic	novelGene_2540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTTTAAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	33749633	33749803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_33749600_33749800
m54284U_201013_031047/79628644/ccs	chr15	-	186	1	Intergenic	novelGene_7875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTTACATCACTTCT	NA	False	NA	NA	False	NA	NA	NA	83897533	83897347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_83897300_83897500
m54284U_201013_031047/7997457/ccs	chr19	+	190	1	Intergenic	novelGene_9284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGGCTGATAGCTCAG	NA	False	NA	NA	False	NA	NA	NA	44631628	44631818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_44631600_44631800
m54284U_201013_031047/80153195/ccs	chr7	+	172	1	Intergenic	novelGene_3743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTTTC	6852	False	NA	NA	False	NA	NA	NA	28323255	28323427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28323300_28323400
m54284U_201013_031047/80283106/ccs	chr14	+	169	1	Intergenic	novelGene_7497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTATTTTAAAAAAAAAAAAG	NA	False	NA	3	True	NA	NA	NA	59816626	59816795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_59816600_59816800
m54284U_201013_031047/80283394/ccs	chr1	+	158	1	Intergenic	novelGene_512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	180579117	180579275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_180579100_180579300
m54284U_201013_031047/80284302/ccs	chr1	+	177	1	Intergenic	novelGene_226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAACCTCTCACATTT	NA	False	NA	NA	False	NA	NA	NA	86256955	86257132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_86257000_86257100
m54284U_201013_031047/80413179/ccs	chr11	+	1505	1	Antisense	novelGene_ENSMUSG00000018405.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTATACCTGGCTCCAA	NA	False	NA	1	True	NA	NA	NA	84709673	84711178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_84709700_84711200
m54284U_201013_031047/80414940/ccs	chr16	+	1094	1	Intergenic	novelGene_8050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8999090	9000184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_8999100_9000200
m54284U_201013_031047/8060948/ccs	chr15	-	213	1	Intergenic	novelGene_7755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGGTGGAAGCTGTGGCG	NA	False	NA	NA	False	NA	NA	NA	73322865	73322652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_73322700_73322900
m54284U_201013_031047/80871744/ccs	chr3	+	174	1	Intergenic	novelGene_1585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGATAGATAGATAGATA	1869	False	NA	NA	False	NA	NA	NA	96375889	96376063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_96375900_96376100
m54284U_201013_031047/80937568/ccs	chr9	+	185	1	Intergenic	novelGene_4837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCACAGAAAAGCTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	60684796	60684981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_60684800_60685000
m54284U_201013_031047/81002600/ccs	chr17	+	171	1	Intergenic	novelGene_8427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTATAGTTTA	8672	False	NA	NA	False	NA	NA	NA	26168345	26168516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_26168300_26168500
m54284U_201013_031047/81068052/ccs	chr4	+	186	1	Intergenic	novelGene_1869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACAAAACAAAAGACAA	NA	False	NA	NA	False	NA	NA	NA	54929255	54929441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_54929300_54929400
m54284U_201013_031047/81133657/ccs	chr10	+	174	1	Intergenic	novelGene_5298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTAAAGAAGCCA	NA	False	NA	NA	False	NA	NA	NA	53267750	53267924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_53267800_53267900
m54284U_201013_031047/81396069/ccs	chr6	-	153	1	Intergenic	novelGene_3248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGAAAAGTTGTGTAGAAA	7932	False	NA	NA	False	NA	NA	NA	47772752	47772599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47772600_47772800
m54284U_201013_031047/81396787/ccs	chr6	+	172	1	Intergenic	novelGene_3150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	30203678	30203850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_30203700_30203800
m54284U_201013_031047/81397066/ccs	chr13	+	204	1	Intergenic	novelGene_7316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	560	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGATATTTATGAAATAA	NA	False	NA	NA	False	NA	NA	NA	114135901	114136105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_114135900_114136100
m54284U_201013_031047/81461537/ccs	chr9	+	206	1	Intergenic	novelGene_4787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCACCGCAGAGGGTAGC	NA	False	NA	NA	False	NA	NA	NA	56358585	56358791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_56358600_56358800
m54284U_201013_031047/81527955/ccs	chr14	-	188	1	Intergenic	novelGene_7350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGTGCAACAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	21394495	21394307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_21394300_21394500
m54284U_201013_031047/81854930/ccs	chr12	+	164	1	Intergenic	novelGene_6852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCCTTCTAGCTA	3619	False	NA	NA	False	NA	NA	NA	100996590	100996754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_100996600_100996800
m54284U_201013_031047/81856795/ccs	chr9	-	1126	1	NIC	ENSMUSG00000060461.6	novel	619	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275459	78274333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_78274300_78275500
m54284U_201013_031047/81920553/ccs	chr2	+	158	1	Intergenic	novelGene_745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAACTCTAA	NA	False	NA	NA	False	NA	NA	NA	34290195	34290353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34290200_34290400
m54284U_201013_031047/81921236/ccs	chr14	+	174	1	Intergenic	novelGene_7503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATCTAGATACTCT	NA	False	NA	NA	False	NA	NA	NA	61703928	61704102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_61703900_61704100
m54284U_201013_031047/81921821/ccs	chr11	-	207	1	Intergenic	novelGene_5811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAGCCTATGCTGGTTA	NA	False	NA	NA	False	NA	NA	NA	51719686	51719479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_51719500_51719700
m54284U_201013_031047/81987565/ccs	chr19	-	183	1	Intergenic	novelGene_9227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAAGAATA	7857	False	NA	NA	False	NA	NA	NA	34871601	34871418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_34871400_34871600
m54284U_201013_031047/82117155/ccs	chr19	+	1771	1	FSM	ENSMUSG00000094388.2	ENSMUST00000159764.2	522	1	369	-1618	369	1618	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGACATGTATC	NA	False	NA	NA	False	AATAAA	-17	NA	40611272	40613043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_40611300_40613000
m54284U_201013_031047/82707216/ccs	chr11	+	2284	1	Genic_Genomic	ENSMUSG00000018286.7	novel	NA	NA	NA	NA	0	1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGTGTGAAGGT	NA	False	NA	24	True	AATAAA	-14	NA	70416192	70418476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_70416200_70418500
m54284U_201013_031047/83429353/ccs	chr14	-	233	1	Intergenic	novelGene_7505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAAAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	61832235	61832002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_61832000_61832200
m54284U_201013_031047/83495737/ccs	chr4	+	192	1	Intergenic	novelGene_1926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAAGCTATGGGTAC	NA	False	NA	NA	False	NA	NA	NA	86721727	86721919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_86721700_86721900
m54284U_201013_031047/83691918/ccs	chr2	+	188	1	Intergenic	novelGene_1148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	154644233	154644421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154644200_154644400
m54284U_201013_031047/8391392/ccs	chr8	+	3423	1	Antisense	novelGene_ENSMUSG00000036550.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGAGATAGCGCATGC	NA	False	NA	NA	False	NA	NA	NA	96450170	96453593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_+_96450200_96453600
m54284U_201013_031047/84214157/ccs	chr17	-	184	1	Intergenic	novelGene_8559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCATATTAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	35798637	35798453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35798500_35798600
m54284U_201013_031047/84216403/ccs	chr7	-	183	1	Intergenic	novelGene_3821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCAAAAGAAGGAATGAGA	NA	False	NA	NA	False	NA	NA	NA	42992363	42992180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_42992200_42992400
m54284U_201013_031047/84607852/ccs	chr1	+	182	1	Intergenic	novelGene_545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGGGGCCTGGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	190525521	190525703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_190525500_190525700
m54284U_201013_031047/84608378/ccs	chr16	-	186	1	Intergenic	novelGene_8247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATCTATTGTTCTATCC	6870	False	NA	NA	False	NA	NA	NA	35925902	35925716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_35925700_35925900
m54284U_201013_031047/84675356/ccs	chrX	-	172	1	Intergenic	novelGene_9371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGATAGGAGATAGTTT	6443	False	NA	NA	False	NA	NA	NA	7961403	7961231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_7961200_7961400
m54284U_201013_031047/84738356/ccs	chr3	-	184	1	Intergenic	novelGene_1567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAAGTGTTTTTACTGG	NA	False	NA	NA	False	NA	NA	NA	95196822	95196638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_95196600_95196800
m54284U_201013_031047/84935217/ccs	chr6	+	174	1	Intergenic	novelGene_3265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49277406	49277580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_49277400_49277600
m54284U_201013_031047/8520243/ccs	chr16	+	305	1	Intergenic	novelGene_8082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	13984683	13984988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13984700_13985000
m54284U_201013_031047/85263986/ccs	chr15	+	390	1	Intergenic	novelGene_7709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGTGACCACACTCTG	NA	False	NA	NA	False	NA	NA	NA	51703660	51704050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_51703700_51704000
m54284U_201013_031047/85328405/ccs	chr9	+	176	1	Intergenic	novelGene_4734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	6726	False	NA	NA	False	NA	NA	NA	44343020	44343196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_44343000_44343200
m54284U_201013_031047/85524522/ccs	chr2	+	188	1	Intergenic	novelGene_1269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTGGGTAACTACTC	NA	False	NA	NA	False	NA	NA	NA	168664723	168664911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168664700_168664900
m54284U_201013_031047/85591455/ccs	chr7	+	177	1	Intergenic	novelGene_3700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAAGATTGCTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	24239643	24239820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_24239600_24239800
m54284U_201013_031047/85723612/ccs	chr16	+	231	1	Intergenic	novelGene_8097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAAAAGCTCACTTGATCT	4488	False	NA	NA	False	NA	NA	NA	17040077	17040308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17040100_17040300
m54284U_201013_031047/86441998/ccs	chr4	-	184	1	Intergenic	novelGene_2196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATTGCTATTATTTCA	NA	False	NA	NA	False	NA	NA	NA	132334936	132334752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_132334800_132334900
m54284U_201013_031047/8652930/ccs	chr3	+	132	1	Intergenic	novelGene_1466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	86831493	86831625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_86831500_86831600
m54284U_201013_031047/86771750/ccs	chr16	+	187	1	Intergenic	novelGene_8088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTTGGGATACAACTAGA	NA	False	NA	NA	False	NA	NA	NA	15413957	15414144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_15414000_15414100
m54284U_201013_031047/86903469/ccs	chr14	+	189	1	Intergenic	novelGene_7606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTTCAACTCTGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124620596	124620785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_124620600_124620800
m54284U_201013_031047/87034614/ccs	chr5	+	210	1	Intergenic	novelGene_2712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTCAGAATAATGATAAAT	1604	False	NA	NA	False	NA	NA	NA	104172291	104172501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_104172300_104172500
m54284U_201013_031047/87558311/ccs	chr8	-	240	1	Intergenic	novelGene_4450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAATCCCAGCACTGAGG	NA	False	NA	NA	False	AAAAAG	-40	NA	106643088	106642848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106642800_106643100
m54284U_201013_031047/87753103/ccs	chr3	-	178	1	Intergenic	novelGene_1359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	19908772	19908594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_19908600_19908800
m54284U_201013_031047/87755065/ccs	chr19	+	184	1	Intergenic	novelGene_9107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTCTGGCTGAAAGGTG	NA	False	NA	NA	False	NA	NA	NA	5839739	5839923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_5839700_5839900
m54284U_201013_031047/88016368/ccs	chr5	+	153	1	Intergenic	novelGene_2979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAATAAATAAATC	6894	False	NA	NA	False	NA	NA	NA	135696092	135696245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_135696100_135696200
m54284U_201013_031047/88148779/ccs	chr18	+	181	1	Intergenic	novelGene_8891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAACAACTTCTG	NA	False	NA	NA	False	NA	NA	NA	35626359	35626540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35626400_35626500
m54284U_201013_031047/88342593/ccs	chr2	-	234	1	Intergenic	novelGene_758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTTTCTTTCCAAGC	NA	False	NA	NA	False	AAAAAG	-33	NA	34710692	34710458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34710500_34710700
m54284U_201013_031047/88344841/ccs	chr15	+	174	1	Intergenic	novelGene_7626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACATTATTTAT	NA	False	NA	NA	False	NA	NA	NA	8568702	8568876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8568700_8568900
m54284U_201013_031047/88345103/ccs	chr16	-	185	1	Intergenic	novelGene_8081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGTCACAGAGACAGT	NA	False	NA	NA	False	NA	NA	NA	13949789	13949604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_13949600_13949800
m54284U_201013_031047/88540293/ccs	chr15	+	178	1	Intergenic	novelGene_7890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	85491271	85491449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_85491300_85491400
m54284U_201013_031047/88671013/ccs	chr4	+	178	1	Intergenic	novelGene_2431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAACATCCCTCAT	2657	False	NA	NA	False	NA	NA	NA	155731004	155731182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_155731000_155731200
m54284U_201013_031047/88671219/ccs	chr7	+	250	1	Intergenic	novelGene_3769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATTACATATCTGGTAT	NA	False	NA	NA	False	TTTAAA	-6	NA	29752205	29752455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29752200_29752500
m54284U_201013_031047/88933622/ccs	chr2	+	4638	1	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	0	1885	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCTAAAATAGTTTTCAA	7233	False	NA	NA	False	NA	NA	NA	29779836	29784474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779800_29784500
m54284U_201013_031047/89066088/ccs	chr2	+	5204	1	ISM	ENSMUSG00000044042.20	ENSMUST00000099576.9	11817	19	383828	0	2893	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGTGTGGTGGAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	113541908	113547112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_113541900_113547100
m54284U_201013_031047/89131010/ccs	chr7	+	179	1	Intergenic	novelGene_4056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTATTTAAAAAAATAACC	NA	False	NA	NA	False	NA	NA	NA	118208637	118208816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_118208600_118208800
m54284U_201013_031047/90049251/ccs	chr7	-	172	1	Intergenic	novelGene_3904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGTATGTATGTCAG	NA	False	NA	NA	False	NA	NA	NA	79396895	79396723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79396700_79396900
m54284U_201013_031047/90112083/ccs	chr1	+	189	1	Intergenic	novelGene_185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATTAAATCAAACTTAAA	3273	False	NA	NA	False	NA	NA	NA	74396547	74396736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74396500_74396700
m54284U_201013_031047/90113028/ccs	chr14	-	221	1	Intergenic	novelGene_7448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTGG	NA	False	NA	NA	False	NA	NA	NA	52548126	52547905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_52547900_52548100
m54284U_201013_031047/90573045/ccs	chr11	-	194	1	Intergenic	novelGene_6035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTGTTATTAGTTT	1937	False	NA	NA	False	NA	NA	NA	76526179	76525985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_76526000_76526200
m54284U_201013_031047/90638775/ccs	chr19	+	189	1	Intergenic	novelGene_9085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	4478228	4478417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4478200_4478400
m54284U_201013_031047/90767814/ccs	chr8	-	180	1	Intergenic	novelGene_4496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGTACAGTCTAT	NA	False	NA	NA	False	NA	NA	NA	111912929	111912749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_111912700_111912900
m54284U_201013_031047/90769324/ccs	chr5	+	172	1	Intergenic	novelGene_2834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTTTAAAAAATATAT	NA	False	NA	NA	False	NA	NA	NA	119654162	119654334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_119654200_119654300
m54284U_201013_031047/91622178/ccs	chr2	-	184	1	Intergenic	novelGene_1161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACGCCTGACAGTAAAG	NA	False	NA	NA	False	NA	NA	NA	155283666	155283482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_155283500_155283700
m54284U_201013_031047/91753306/ccs	chr6	+	182	1	Intergenic	novelGene_3548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCAAGTCATCTTGTTAT	6505	False	NA	NA	False	NA	NA	NA	134647613	134647795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_134647600_134647800
m54284U_201013_031047/9176263/ccs	chr9	+	158	1	Intergenic	novelGene_4733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAATATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	44288886	44289044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_44288900_44289000
m54284U_201013_031047/91883989/ccs	chrX	-	1628	3	NIC	ENSMUSG00000031146.7	novel	1212	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	2052	junction_2	57	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATAAGTTAACTTTTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	7537611	7534179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_7534746_7535165_7535998_7537381
m54284U_201013_031047/91949133/ccs	chr1	+	173	1	Intergenic	novelGene_202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	9298	False	NA	NA	False	NA	NA	NA	75488859	75489032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_75488900_75489000
m54284U_201013_031047/92342707/ccs	chr6	+	174	1	Intergenic	novelGene_3384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAATAAACAAAAAG	NA	False	NA	NA	False	NA	NA	NA	88415246	88415420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_88415200_88415400
m54284U_201013_031047/9241038/ccs	chr1	+	304	1	Intergenic	novelGene_97	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGGAAGGCAGCCAGGC	8019	False	NA	NA	False	NA	NA	NA	39360463	39360767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_39360500_39360800
m54284U_201013_031047/92602531/ccs	chr14	+	150	1	Intergenic	novelGene_7455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATCTCAAATGCTTGAC	NA	False	NA	NA	False	NA	NA	NA	54580570	54580720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54580600_54580700
m54284U_201013_031047/92668153/ccs	chr16	+	2954	1	Intergenic	novelGene_8331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGGTGGCGCACCC	NA	False	NA	NA	False	GATAAA	-36	NA	95862717	95865671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_95862700_95865700
m54284U_201013_031047/93063902/ccs	chr9	+	186	1	Intergenic	novelGene_5118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAGGAAAAAAAGAAAGA	471	False	NA	NA	False	NA	NA	NA	110844997	110845183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_110845000_110845200
m54284U_201013_031047/9306815/ccs	chr18	-	194	1	Intergenic	novelGene_8872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTATATTTCCTTTTTA	3414	False	NA	NA	False	NA	NA	NA	34700445	34700251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34700300_34700400
m54284U_201013_031047/93194388/ccs	chr4	+	199	1	Intergenic	novelGene_2018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAAATCTATTTGGCT	NA	False	NA	NA	False	NA	NA	NA	116377078	116377277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116377100_116377300
m54284U_201013_031047/93259669/ccs	chr1	+	175	1	Intergenic	novelGene_149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTACAAAAAGAAAACCTA	4640	False	NA	NA	False	NA	NA	NA	60052459	60052634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_60052500_60052600
m54284U_201013_031047/93324570/ccs	chr15	-	178	1	Intergenic	novelGene_7946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	98714392	98714214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98714200_98714400
m54284U_201013_031047/93324718/ccs	chr10	-	188	1	Intergenic	novelGene_5595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAATAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	126757737	126757549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_126757500_126757700
m54284U_201013_031047/93388919/ccs	chr13	+	179	1	Intergenic	novelGene_6992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGGAACA	NA	False	NA	NA	False	NA	NA	NA	22605528	22605707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_22605500_22605700
m54284U_201013_031047/93456235/ccs	chr4	-	174	1	Intergenic	novelGene_2111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	126113382	126113208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_126113200_126113400
m54284U_201013_031047/93782403/ccs	chr2	+	185	1	Intergenic	novelGene_832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAGAAACAGGAC	NA	False	NA	NA	False	NA	NA	NA	69667469	69667654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69667500_69667700
m54284U_201013_031047/93784777/ccs	chr11	-	163	1	Intergenic	novelGene_6381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATCTTTTTTTAAAATCC	6105	False	NA	NA	False	NA	NA	NA	105938393	105938230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_105938200_105938400
m54284U_201013_031047/93850412/ccs	chr2	+	177	1	Intergenic	novelGene_796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATTA	NA	False	NA	NA	False	NA	NA	NA	53735515	53735692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_53735500_53735700
m54284U_201013_031047/93979292/ccs	chr6	+	164	1	Intergenic	novelGene_3193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAAAGATAAGAATTGCC	NA	False	NA	NA	False	NA	NA	NA	38273897	38274061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38273900_38274100
m54284U_201013_031047/93980470/ccs	chr2	+	583	1	ISM	ENSMUSG00000040794.6	ENSMUST00000111466.3	1290	2	4083	0	4083	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGACTGTGATGCCTTTT	NA	False	NA	32	True	AATAAA	-38	NA	90720286	90720869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_90720300_90720900
m54284U_201013_031047/93980588/ccs	chr8	+	189	1	Intergenic	novelGene_4210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTGACCTCACTCTCTC	9822	False	NA	NA	False	NA	NA	NA	13801970	13802159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_13802000_13802200
m54284U_201013_031047/93980792/ccs	chr2	+	3108	1	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	0	-21373	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60040256	60043364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_60040300_60043400
m54284U_201013_031047/94112137/ccs	chr6	+	192	1	Intergenic	novelGene_3347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGACATGGTGGCCCAGA	1086	False	NA	NA	False	NA	NA	NA	83842732	83842924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_83842700_83842900
m54284U_201013_031047/94765369/ccs	chr19	+	97	1	Intergenic	novelGene_9089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTCATATCTTGTAGCTGA	NA	False	NA	NA	False	NA	NA	NA	4895279	4895376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4895300_4895400
m54284U_201013_031047/94767513/ccs	chr5	-	189	1	Intergenic	novelGene_2478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAACTATGCCATCAT	NA	False	NA	NA	False	NA	NA	NA	22241243	22241054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_22241100_22241200
m54284U_201013_031047/9503261/ccs	chr5	-	188	1	Intergenic	novelGene_2817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	117205016	117204828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_117204800_117205000
m54284U_201013_031047/95487801/ccs	chr4	+	189	1	Intergenic	novelGene_2014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTTGCAAGTCCAATG	8287	False	NA	NA	False	NA	NA	NA	116132118	116132307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116132100_116132300
m54284U_201013_031047/9568747/ccs	chr11	-	184	1	Intergenic	novelGene_5672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGGTAGAGGTACCAG	NA	False	NA	NA	False	NA	NA	NA	4819675	4819491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_4819500_4819700
m54284U_201013_031047/9568861/ccs	chr15	+	218	1	Intergenic	novelGene_7947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTCTTCTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	98785845	98786063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98785800_98786100
m54284U_201013_031047/9570801/ccs	chr1	+	142	1	NIC	ENSMUSG00000100894.2	novel	584	2	NA	NA	289	-297	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCTGAATTTTTGCTGC	NA	False	NA	NA	False	NA	NA	NA	45641474	45641616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_45641500_45641600
m54284U_201013_031047/95815428/ccs	chr11	-	176	1	Intergenic	novelGene_6285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	97756428	97756252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97756300_97756400
m54284U_201013_031047/95816042/ccs	chrX	+	191	1	Intergenic	novelGene_9382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACTAGCACCAGAGAAC	NA	False	NA	NA	False	NA	NA	NA	12187275	12187466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_12187300_12187500
m54284U_201013_031047/95946690/ccs	chr11	-	1562	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	295	junction_10	702.611101534839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAACCTTGTTCACTT	9585	False	NA	-6	True	AATAAA	-17	NA	5828212	5822187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828187
m54284U_201013_031047/95947371/ccs	chr11	+	1392	1	Intergenic	novelGene_6517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCTCTGGGTTTCTGTT	NA	False	NA	11	True	NA	NA	NA	120524561	120525953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120524600_120526000
m54284U_201013_031047/96075864/ccs	chr3	+	160	1	Intergenic	novelGene_1376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTCTCCTTTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	32380454	32380614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_32380500_32380600
m54284U_201013_031047/9701355/ccs	chr6	+	184	1	Intergenic	novelGene_3512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	125306335	125306519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_125306300_125306500
m54284U_201013_031047/97191781/ccs	chr11	-	170	2	Antisense	novelGene_ENSMUSG00000045671.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	165	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	19950095	19918293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_19918416_19950047
m54284U_201013_031047/97452657/ccs	chr7	+	193	1	Intergenic	novelGene_4140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATACTAAATAGCACTTGT	NA	False	NA	NA	False	NA	NA	NA	137040952	137041145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_137041000_137041100
m54284U_201013_031047/97454249/ccs	chr19	+	191	1	Intergenic	novelGene_9187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAGCTAACAGAGG	NA	False	NA	NA	False	NA	NA	NA	24148731	24148922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_24148700_24148900
m54284U_201013_031047/97519289/ccs	chr11	-	167	2	Intergenic	novelGene_5790	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	216	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGAAAGAAC	3957	False	NA	NA	False	NA	NA	NA	46359888	46299830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_46299954_46359844
m54284U_201013_031047/98173307/ccs	chr17	-	161	1	Antisense	novelGene_ENSMUSG00000117250.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTTTCTTTATCATTA	NA	False	NA	-9	True	NA	NA	NA	66196186	66196025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_66196000_66196200
m54284U_201013_031047/98305099/ccs	chr4	+	203	1	Intergenic	novelGene_2360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTCAAAAGAGAGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	147486812	147487015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_147486800_147487000
m54284U_201013_031047/98634311/ccs	chr8	-	242	1	Intergenic	novelGene_4241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGATACTGGAG	NA	False	NA	NA	False	NA	NA	NA	26390931	26390689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_26390700_26390900
m54284U_201013_031047/98697466/ccs	chr3	-	180	1	Intergenic	novelGene_1631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTAAAAATTGTGATC	5202	False	NA	NA	False	NA	NA	NA	108557229	108557049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108557000_108557200
m54284U_201013_031047/99813750/ccs	chr1	+	224	1	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGGAAGAGAATTCAAAAA	NA	False	NA	NA	False	AATAGA	-10	NA	16683728	16683952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_16683700_16684000
m54284U_201014_093907/100009176/ccs	chr7	+	2767	4	NNC	ENSMUSG00000068566.14	novel	4027	3	NA	NA	0	-108	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_3	395.547159711147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATTTTAATTTT	271	False	NA	13	True	NA	NA	NA	3339099	3347730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3339318_3341727_3341816_3345237_3346692_3346723
m54284U_201014_093907/10028928/ccs	chr2	-	187	1	Intergenic	novelGene_968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	555	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGTAATAGGTGAA	NA	False	NA	NA	False	NA	NA	NA	104313116	104312929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_104312900_104313100
m54284U_201014_093907/100336212/ccs	chr15	+	171	1	Intergenic	novelGene_7825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAACCAA	3799	False	NA	NA	False	NA	NA	NA	80114264	80114435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_80114300_80114400
m54284U_201014_093907/100401189/ccs	chr11	+	189	1	Intergenic	novelGene_6185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACAGTGTGCTGTGTTT	80	False	NA	NA	False	NA	NA	NA	87932028	87932217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87932000_87932200
m54284U_201014_093907/100401664/ccs	chr1	+	172	1	Intergenic	novelGene_272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	118278068	118278240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_118278100_118278200
m54284U_201014_093907/100534026/ccs	chr14	+	15197	9	NIC	ENSMUSG00000048279.20	novel	4581	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	3.93700393700591	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTGACTGGTTATTTT	NA	False	NA	15	True	AATAAA	-18	NA	61410438	61452946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_61410665_61410746_61410898_61416670_61416759_61418393_61418480_61421400_61421513_61427050_61427198_61428546_61430042_61430836_61430929_61440146
m54284U_201014_093907/100534245/ccs	chr17	+	2550	1	Intergenic	novelGene_8763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAATGTGTACACAGG	5653	False	NA	NA	False	NA	NA	NA	84632175	84634725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_84632200_84634700
m54284U_201014_093907/100599710/ccs	chr4	+	3626	13	NIC	ENSMUSG00000011257.20	novel	2700	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	253	junction_1	64.5774190840386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	NA	False	NA	8	True	AATAAA	-31	NA	123176617	123192625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189851_123191471_123191566_123191653_123191887_123192305
m54284U_201014_093907/100600481/ccs	chr4	+	1641	1	Intergenic	novelGene_2359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	147475978	147477619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_147476000_147477600
m54284U_201014_093907/100860850/ccs	chr6	+	183	1	Intergenic	novelGene_3185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACAAACTAGTTAATTA	NA	False	NA	NA	False	NA	NA	NA	37723037	37723220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_37723000_37723200
m54284U_201014_093907/100925521/ccs	chr1	+	177	1	Intergenic	novelGene_426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAATCAT	NA	False	NA	NA	False	NA	NA	NA	160187901	160188078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_160187900_160188100
m54284U_201014_093907/100927481/ccs	chr1	+	184	1	Intergenic	novelGene_474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAATAAAGAGCTG	2599	False	NA	NA	False	NA	NA	NA	171035455	171035639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171035500_171035600
m54284U_201014_093907/100992970/ccs	chr5	-	202	1	Intergenic	novelGene_2895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCGGGCGTGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	124314132	124313930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124313900_124314100
m54284U_201014_093907/101122579/ccs	chr7	+	1874	1	Intergenic	novelGene_3829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	44137278	44139152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_44137300_44139200
m54284U_201014_093907/101319599/ccs	chr17	-	186	1	Intergenic	novelGene_8745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	80687042	80686856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_80686900_80687000
m54284U_201014_093907/10158212/ccs	chr6	+	219	1	Intergenic	novelGene_3422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATTAATGCTGTTTAA	5803	False	NA	NA	False	NA	NA	NA	113313679	113313898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_113313700_113313900
m54284U_201014_093907/10158657/ccs	chr7	+	178	1	Intergenic	novelGene_3962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	97943871	97944049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_97943900_97944000
m54284U_201014_093907/10159308/ccs	chr17	+	182	1	Intergenic	novelGene_8730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGGCCTCCCTTCTCAA	NA	False	NA	NA	False	NA	NA	NA	75241281	75241463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_75241300_75241500
m54284U_201014_093907/101845318/ccs	chr12	+	207	1	Intergenic	novelGene_6762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTAAACTCTAGGGTTA	7439	False	NA	NA	False	NA	NA	NA	80700119	80700326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_80700100_80700300
m54284U_201014_093907/102039786/ccs	chr9	+	200	1	Intergenic	novelGene_5040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAATTTTTGCAACAA	NA	False	NA	NA	False	NA	NA	NA	102073573	102073773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102073600_102073800
m54284U_201014_093907/102170761/ccs	chr11	+	200	1	Intergenic	novelGene_6154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTAATGAACCAGTATCT	NA	False	NA	NA	False	AAAACA	-10	NA	86429293	86429493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_86429300_86429500
m54284U_201014_093907/102237181/ccs	chr16	+	197	1	Intergenic	novelGene_8118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGTGGCATTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	18162857	18163054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18162900_18163100
m54284U_201014_093907/102304360/ccs	chr8	+	1361	9	NNC	ENSMUSG00000031820.10	novel	1433	9	NA	NA	0	-69	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_7	111.202236937932	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGGTGTCACTTTGGGC	NA	False	NA	20	True	AATAAA	-22	NA	71849504	71857194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855622_71855707_71856838
m54284U_201014_093907/102304450/ccs	chr17	-	5742	7	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_6	16.5998661306516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGGCAAACAGCCAGT	NA	False	NA	-16	True	ATTAAA	-18	NA	32583437	32573034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32580939_32581766_32581938_32583155
m54284U_201014_093907/102433527/ccs	chr9	+	177	1	Intergenic	novelGene_4924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATTAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	72184764	72184941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72184800_72184900
m54284U_201014_093907/102433592/ccs	chr6	-	3344	5	ISM	ENSMUSG00000039841.15	ENSMUST00000115320.8	4311	6	-21	2307	0	-785	5prime_fragment	FALSE	canonical	2	3	junction_4	19.2548695139697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTAGTATTATTCAGT	-6	True	NA	NA	False	AATAAA	-21	NA	28261931	28242232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261376
m54284U_201014_093907/102498684/ccs	chr12	+	5005	1	Antisense	novelGene_ENSMUSG00000020593.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6623	False	NA	NA	False	NA	NA	NA	16628994	16633999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_+_16629000_16634000
m54284U_201014_093907/102763328/ccs	chr14	+	175	1	Intergenic	novelGene_7592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111437829	111438004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_111437800_111438000
m54284U_201014_093907/102892807/ccs	chr5	+	4026	30	NNC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	0	-5308	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_29	60.2165533196477	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGAGGAGGAGGAA	NA	False	NA	NA	False	AATACA	-15	NA	110434242	110461735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110461302
m54284U_201014_093907/102893248/ccs	chr8	-	3365	11	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	458	junction_4	35.296033771516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325913	4309730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4316681_4316769_4316863_4317254_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
m54284U_201014_093907/10291008/ccs	chr11	-	175	1	Intergenic	novelGene_6504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTTTTTTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	119944726	119944551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_119944600_119944700
m54284U_201014_093907/10291318/ccs	chr13	+	203	1	Intergenic	novelGene_7290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACCTAAGTAGTATAAG	NA	False	NA	NA	False	NA	NA	NA	107021222	107021425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_107021200_107021400
m54284U_201014_093907/10291561/ccs	chr6	-	185	1	Intergenic	novelGene_3219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAATAATGTATCTTTGT	3237	False	NA	NA	False	NA	NA	NA	39344193	39344008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39344000_39344200
m54284U_201014_093907/102958670/ccs	chr9	+	326	1	Intergenic	novelGene_4970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAAATAGACC	1793	False	NA	NA	False	NA	NA	NA	78397667	78397993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_78397700_78398000
m54284U_201014_093907/103023212/ccs	chr3	+	197	1	Antisense	novelGene_ENSMUSG00000042520.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAACCAGGGCTTGT	NA	False	NA	NA	False	NA	NA	NA	89944069	89944266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_89944100_89944300
m54284U_201014_093907/103156529/ccs	chr6	-	183	1	Intergenic	novelGene_3474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCATCTCACTCAG	NA	False	NA	NA	False	NA	NA	NA	122346908	122346725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122346700_122346900
m54284U_201014_093907/103483704/ccs	chr3	+	983	1	Antisense	novelGene_ENSMUSG00000042642.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTTGTAGACCAGGCT	NA	False	NA	NA	False	NA	NA	NA	89314575	89315558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_89314600_89315600
m54284U_201014_093907/103744219/ccs	chr10	+	118	1	Intergenic	novelGene_5353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	62734466	62734584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62734500_62734600
m54284U_201014_093907/103811764/ccs	chr12	-	161	1	Intergenic	novelGene_6833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAGTTATTAGCTA	NA	False	NA	NA	False	NA	NA	NA	91597235	91597074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_91597100_91597200
m54284U_201014_093907/104006968/ccs	chr9	-	3890	9	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	143.764564479568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156943
m54284U_201014_093907/104267845/ccs	chr10	-	177	1	Intergenic	novelGene_5257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTGCACTG	NA	False	NA	NA	False	NA	NA	NA	35868782	35868605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_35868600_35868800
m54284U_201014_093907/104598326/ccs	chr12	+	180	1	Intergenic	novelGene_6898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	110646789	110646969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_110646800_110647000
m54284U_201014_093907/104924277/ccs	chr8	+	185	1	Intergenic	novelGene_4285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAAAACAGTCAT	NA	False	NA	NA	False	NA	NA	NA	46666122	46666307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_46666100_46666300
m54284U_201014_093907/104924386/ccs	chr11	-	128	1	Intergenic	novelGene_6369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTTTATAAAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	104392099	104391971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_104392000_104392100
m54284U_201014_093907/104988959/ccs	chr1	+	3900	1	Antisense	novelGene_ENSMUSG00000026110.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGAAGAAGACGACGACG	4525	False	NA	NA	False	AATAAA	-42	NA	37499125	37503025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_37499100_37503000
m54284U_201014_093907/104989123/ccs	chr10	+	180	1	Intergenic	novelGene_5195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAATAGTAAACA	NA	False	NA	NA	False	NA	NA	NA	12554809	12554989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_12554800_12555000
m54284U_201014_093907/105054977/ccs	chr7	+	179	1	NIC	ENSMUSG00000091528.10	novel	2598	7	NA	NA	4497	-24633	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	42672718	42672897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_42672700_42672900
m54284U_201014_093907/105122356/ccs	chr2	+	2721	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1876	junction_5	283.045536107186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130119545_130119768_130119891_130120075_130120211_130120816
m54284U_201014_093907/105188114/ccs	chr15	-	192	1	Intergenic	novelGene_7949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACATTCTGGGCTAATGT	9821	False	NA	NA	False	NA	NA	NA	98822284	98822092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98822100_98822300
m54284U_201014_093907/105318353/ccs	chr6	+	3380	6	NNC	ENSMUSG00000041390.19	novel	3435	5	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	63.3731804472523	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTTTAAGATCTTTTTT	11	False	NA	12	True	ATTAAA	-20	NA	15720772	15802168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_15720963_15721185_15721364_15731582_15731641_15740986_15741110_15770212_15770492_15799616
m54284U_201014_093907/105448965/ccs	chr6	-	1508	7	NIC	ENSMUSG00000079477.10	novel	1657	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_6	799.58419749823	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTGGATTGTGTGTTT	NA	False	NA	0	True	ATTAAA	-21	NA	88022213	87976786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_87992613_87992701_88022054
m54284U_201014_093907/105644551/ccs	chr1	+	176	1	Intergenic	novelGene_279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAACTTTAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	119700182	119700358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_119700200_119700400
m54284U_201014_093907/105775724/ccs	chr17	+	1957	1	Antisense	novelGene_ENSMUSG00000116560.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9982	False	NA	NA	False	AAAAAG	-34	NA	6792846	6794803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_6792800_6794800
m54284U_201014_093907/105841855/ccs	chr5	+	178	1	Intergenic	novelGene_2729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	107395012	107395190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_107395000_107395200
m54284U_201014_093907/105842893/ccs	chr2	+	221	1	Intergenic	novelGene_804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTTTCTCTTACATCTT	NA	False	NA	NA	False	AAGAAA	-42	NA	59440569	59440790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_59440600_59440800
m54284U_201014_093907/105908779/ccs	chr11	+	177	1	Intergenic	novelGene_6252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAGACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96668958	96669135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_96669000_96669100
m54284U_201014_093907/106039319/ccs	chrX	+	176	1	Intergenic	novelGene_9390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAATTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	12635733	12635909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_12635700_12635900
m54284U_201014_093907/106039981/ccs	chr11	+	193	1	Intergenic	novelGene_5703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTTCTGGAGGCTGTTG	NA	False	NA	NA	False	NA	NA	NA	14067171	14067364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_14067200_14067400
m54284U_201014_093907/106367305/ccs	chr7	+	1622	4	NIC	ENSMUSG00000037563.16	novel	628	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	19383	junction_2	612.04702070638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTTTTGTGTTGGTCTC	NA	False	NA	0	True	AATAAA	-21	NA	28050187	28052121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28050277_28050416_28051699_28051787_28051836_28051918
m54284U_201014_093907/106367658/ccs	chr15	-	183	1	Intergenic	novelGene_7999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAAGAAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	102177378	102177195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102177200_102177400
m54284U_201014_093907/106367715/ccs	chr9	+	137	1	Intergenic	novelGene_4906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATTATAACATAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	67661435	67661572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_67661400_67661600
m54284U_201014_093907/106431844/ccs	chr14	+	5819	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	3.46648653907957	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTTCTAGTGATGCA	NA	False	NA	4	True	ATTAAA	-12	NA	60940401	61001998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_60940572_60944162_60944499_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
m54284U_201014_093907/106496068/ccs	chr17	+	198	1	Intergenic	novelGene_8361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTAGCCGGGCGGT	NA	False	NA	NA	False	NA	NA	NA	8547032	8547230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_8547000_8547200
m54284U_201014_093907/106562207/ccs	chr10	+	206	1	Intergenic	novelGene_5321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACCTTTACCCTGGCA	NA	False	NA	NA	False	AAAAAG	-7	NA	60597086	60597292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_60597100_60597300
m54284U_201014_093907/106823856/ccs	chrX	+	227	1	Intergenic	novelGene_9466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGACTTTATTCCCTCC	NA	False	NA	NA	False	TTTAAA	-11	NA	53255636	53255863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_53255600_53255900
m54284U_201014_093907/10683871/ccs	chr1	+	168	1	Antisense	novelGene_ENSMUSG00000044768.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGGGAGGGAGG	6804	False	NA	NA	False	NA	NA	NA	97570527	97570695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_97570500_97570700
m54284U_201014_093907/106956357/ccs	chr3	-	183	1	Intergenic	novelGene_1669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAATAATCTT	8883	False	NA	NA	False	NA	NA	NA	123026086	123025903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_123025900_123026100
m54284U_201014_093907/107086294/ccs	chr18	-	202	1	Intergenic	novelGene_8915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATATGTACAGTAGCC	NA	False	NA	NA	False	NA	NA	NA	36830803	36830601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36830600_36830800
m54284U_201014_093907/107087442/ccs	chr10	-	208	1	Intergenic	novelGene_5368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAATAGAAATAAATCTT	NA	False	NA	NA	False	GATAAA	-9	NA	66708889	66708681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_66708700_66708900
m54284U_201014_093907/10749128/ccs	chr12	-	181	1	Intergenic	novelGene_6913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTGTATATTTCTAAC	6627	False	NA	NA	False	NA	NA	NA	111448385	111448204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111448200_111448400
m54284U_201014_093907/10750729/ccs	chrX	+	4078	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_2	270.766466332042	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100998	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102998_143103058_143105013_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201014_093907/107611508/ccs	chr7	+	174	1	Intergenic	novelGene_4006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAAAG	NA	False	NA	NA	False	NA	NA	NA	109098771	109098945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109098800_109098900
m54284U_201014_093907/107676621/ccs	chr13	+	176	1	Intergenic	novelGene_7172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGCAT	NA	False	NA	NA	False	NA	NA	NA	65352221	65352397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_65352200_65352400
m54284U_201014_093907/108005343/ccs	chr2	+	3470	11	NIC	ENSMUSG00000006494.12	novel	5185	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	73.0534735656012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGCCCTCTCCAAGGA	NA	False	NA	11	True	AATAAA	-23	NA	71703663	71732330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_71704163_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
m54284U_201014_093907/108069151/ccs	chr12	+	178	1	Intergenic	novelGene_6689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGAACCAAGTG	1143	False	NA	NA	False	NA	NA	NA	69844825	69845003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_69844800_69845000
m54284U_201014_093907/108202478/ccs	chr19	-	2650	8	NIC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2610	junction_7	205.571676759505	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACCCCTGCCTCATGA	NA	False	NA	12	True	AATAAA	-2	NA	8691243	8684950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8690268_8690705
m54284U_201014_093907/108462155/ccs	chr7	+	213	1	Intergenic	novelGene_4076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATCTTCTAGTAGGTT	6878	False	NA	NA	False	ATTAAA	-15	NA	125760611	125760824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_125760600_125760800
m54284U_201014_093907/108659442/ccs	chr5	+	204	1	Intergenic	novelGene_2691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGAACTCAGATTCTT	NA	False	NA	NA	False	NA	NA	NA	100094946	100095150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_100094900_100095200
m54284U_201014_093907/108724305/ccs	chr17	-	4274	37	NIC	ENSMUSG00000024120.13	novel	4393	38	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_35	108.610159131946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTATGTATTTTTTTAT	NA	False	NA	-6	True	AATAAA	-16	NA	85097990	85012674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85084368_85084563_85097792
m54284U_201014_093907/108726934/ccs	chr7	+	187	1	Intergenic	novelGene_3879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAACAAACAAACA	NA	False	NA	6	True	NA	NA	NA	65471727	65471914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_65471700_65471900
m54284U_201014_093907/108792490/ccs	chr17	+	198	1	Intergenic	novelGene_8793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATATATATATAG	NA	False	NA	NA	False	NA	NA	NA	95162349	95162547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_95162300_95162500
m54284U_201014_093907/108986824/ccs	chr8	+	1492	4	NNC	ENSMUSG00000031851.15	novel	1497	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	41.9602986961088	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCATGTCTAATTAGTTTA	NA	False	NA	NA	False	ACTAAA	-15	NA	126460976	126465918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126464793
m54284U_201014_093907/109117750/ccs	chr18	+	182	1	Intergenic	novelGene_8807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGAAAACTAGAAC	NA	False	NA	NA	False	NA	NA	NA	10037753	10037935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_10037800_10037900
m54284U_201014_093907/109183153/ccs	chrX	+	4009	1	Genic_Genomic	ENSMUSG00000046774.18	novel	NA	NA	NA	NA	-22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838239	100842248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chrX_+_100838200_100842200
m54284U_201014_093907/109183917/ccs	chr18	+	181	1	Intergenic	novelGene_8886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGTCAGTTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	35280077	35280258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35280100_35280300
m54284U_201014_093907/109250129/ccs	chr1	+	175	1	Intergenic	novelGene_116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGAAGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	49146175	49146350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_49146200_49146400
m54284U_201014_093907/109314483/ccs	chr2	+	174	1	Intergenic	novelGene_609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATTTTTTCTTTTTAC	NA	False	NA	NA	False	NA	NA	NA	18881529	18881703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_18881500_18881700
m54284U_201014_093907/10944859/ccs	chr1	+	171	1	Intergenic	novelGene_187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	74503464	74503635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74503500_74503600
m54284U_201014_093907/10944970/ccs	chr1	-	177	1	Intergenic	novelGene_145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATATATGAAATC	NA	False	NA	NA	False	NA	NA	NA	59807911	59807734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59807700_59807900
m54284U_201014_093907/109774392/ccs	chr7	+	211	1	Intergenic	novelGene_3773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTTTCGAGACAGGG	NA	False	NA	NA	False	NA	NA	NA	29843805	29844016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29843800_29844000
m54284U_201014_093907/109775159/ccs	chr3	-	199	1	Intergenic	novelGene_1439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCTGAATTACGTGAC	9918	False	NA	NA	False	NA	NA	NA	79119508	79119309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_79119300_79119500
m54284U_201014_093907/109904512/ccs	chr3	-	3702	12	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_6	73.945143840016	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865620	65853571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857648_65857900_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
m54284U_201014_093907/109906097/ccs	chr8	+	154	1	Intergenic	novelGene_4237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAAACAAATC	955	False	NA	NA	False	NA	NA	NA	25911172	25911326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_25911200_25911300
m54284U_201014_093907/110101150/ccs	chr9	+	177	1	Intergenic	novelGene_5006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATACAGG	NA	False	NA	NA	False	NA	NA	NA	96029207	96029384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96029200_96029400
m54284U_201014_093907/11010573/ccs	chr4	-	704	5	NNC	ENSMUSG00000028495.15	novel	878	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	1096	junction_3	7241.45353157776	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTTCATTAATAGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	86775591	86772896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_86773193_86774103_86774251_86774382_86774478_86774964_86775097_86775557
m54284U_201014_093907/11012026/ccs	chr5	+	180	1	Intergenic	novelGene_3047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAACTGCATGTAG	4284	False	NA	NA	False	NA	NA	NA	143425602	143425782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_143425600_143425800
m54284U_201014_093907/110430990/ccs	chr15	+	4314	7	NIC	ENSMUSG00000046897.18	novel	3932	7	NA	NA	-160	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	54.8746045290736	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	746	False	NA	25	True	AATAAA	-26	NA	102111922	102124041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117589_102117709_102121030
m54284U_201014_093907/110624809/ccs	chr6	+	1544	1	FSM	ENSMUSG00000040078.10	ENSMUST00000160012.2	480	1	-118	-946	-118	946	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAGAGGGGGAGGGGGG	NA	False	NA	NA	False	NA	NA	NA	85820843	85822387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_85820800_85822400
m54284U_201014_093907/110625367/ccs	chr1	+	3911	4	NIC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	115	1697	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	77.3146529162199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015212	178080164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_178015524_178070177_178070272_178071906_178072049_178076800
m54284U_201014_093907/110626006/ccs	chrX	+	233	1	Intergenic	novelGene_9491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGCACTCCTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	71631926	71632159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_71631900_71632200
m54284U_201014_093907/110626391/ccs	chr11	+	1003	1	Intergenic	novelGene_6129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	83991999	83993002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_83992000_83993000
m54284U_201014_093907/110756348/ccs	chr15	-	3312	7	NIC	ENSMUSG00000018169.13	novel	1865	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	144	junction_4	12.3017613914973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTCCAGCTTCCTGCT	NA	False	NA	-4	True	ATTAAA	-17	NA	78657675	78640081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_78640845_78641496_78641583_78643392_78645092_78648514_78648669_78651017_78651121_78651341_78651391_78657217
m54284U_201014_093907/11075823/ccs	chr6	+	150	1	Intergenic	novelGene_3134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCAAAGCCATTTTGG	NA	False	NA	NA	False	NA	NA	NA	29688779	29688929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29688800_29688900
m54284U_201014_093907/11077538/ccs	chr11	+	177	1	Intergenic	novelGene_6172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAAAGTTATCC	NA	False	NA	NA	False	NA	NA	NA	87310982	87311159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87311000_87311200
m54284U_201014_093907/110821495/ccs	chr8	+	177	1	Intergenic	novelGene_4573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAGCACTCGTGAGGCA	NA	False	NA	NA	False	NA	NA	NA	123571744	123571921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_123571700_123571900
m54284U_201014_093907/110888946/ccs	chr4	+	177	1	Intergenic	novelGene_1732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTAGGATAGAT	NA	False	NA	NA	False	NA	NA	NA	8550726	8550903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_8550700_8550900
m54284U_201014_093907/110888964/ccs	chr17	-	176	1	Intergenic	novelGene_8472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATTATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29149211	29149035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29149000_29149200
m54284U_201014_093907/110889796/ccs	chr9	+	3470	13	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	39	junction_10	139.10817133919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704646	109722963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109718778_109718910_109720812_109720925_109721146
m54284U_201014_093907/110954460/ccs	chr1	+	5199	1	Intergenic	novelGene_502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCACAAAATCAGGGAATG	NA	False	NA	NA	False	AGTAAA	-30	NA	179324502	179329701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_179324500_179329700
m54284U_201014_093907/111083756/ccs	chr5	-	1344	10	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	76.178315828516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCCTGGTTTTGTATA	NA	False	NA	-7	True	ATTAAA	-25	NA	110255282	110251843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255210
m54284U_201014_093907/111086092/ccs	chr9	-	178	1	Intergenic	novelGene_4943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGGTTGGTTGGTT	NA	False	NA	-2	True	NA	NA	NA	73000019	72999841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72999800_7.3e+07
m54284U_201014_093907/111086405/ccs	chr8	+	196	1	Intergenic	novelGene_4213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTGGTCAGATAGAATA	NA	False	NA	NA	False	NA	NA	NA	14212302	14212498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_14212300_14212500
m54284U_201014_093907/111281372/ccs	chr3	+	2089	1	ISM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	241853	0	9735	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTCCTTGAACTAAACTC	NA	False	NA	25	True	ATTAAA	-28	NA	69466046	69468135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_69466000_69468100
m54284U_201014_093907/111282832/ccs	chr12	+	4190	1	Antisense	novelGene_ENSMUSG00000021224.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAGAAGAGGCCAGC	NA	False	NA	NA	False	NA	NA	NA	83901736	83905926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_+_83901700_83905900
m54284U_201014_093907/111346201/ccs	chr18	+	2343	14	NNC	ENSMUSG00000025423.17	novel	2633	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_13	403.248921024833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTCTAATTAAAGATG	7936	False	NA	13	True	AATAAA	-26	NA	77152940	77240813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240307
m54284U_201014_093907/111411732/ccs	chr1	+	193	1	Intergenic	novelGene_403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTTAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	156163841	156164034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156163800_156164000
m54284U_201014_093907/11143339/ccs	chr7	-	179	1	Intergenic	novelGene_3833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	901	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGGAAAAAAAAAAGGAT	NA	False	NA	-11	True	NA	NA	NA	44585472	44585293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_44585300_44585500
m54284U_201014_093907/111477290/ccs	chr4	+	201	1	Intergenic	novelGene_1967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCTTTTGAGCGAGCG	NA	False	NA	NA	False	NA	NA	NA	104664151	104664352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_104664200_104664400
m54284U_201014_093907/111542284/ccschr1_GL456212v1	chr1_GL456212v1_random	+	211	1	Intergenic	novelGene_9777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCTATAAAACAGAAATGC	NA	False	NA	NA	False	NA	NA	NA	29065	29276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_GL456212v1_random_+_29100_29300
m54284U_201014_093907/111609801/ccs	chrX	+	3852	1	FSM	ENSMUSG00000094574.2	ENSMUST00000120922.2	138	1	129	-3843	129	3843	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	3782	False	NA	NA	False	AATAAA	-16	NA	13045810	13049662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_13045800_13049700
m54284U_201014_093907/111806054/ccs	chr2	+	176	1	Intergenic	novelGene_691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAGAAAA	705	False	NA	NA	False	NA	NA	NA	30953690	30953866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30953700_30953900
m54284U_201014_093907/111872133/ccs	chr4	+	3599	1	NIC	ENSMUSG00000070737.11	novel	1762	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019838	127023437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_127019800_127023400
m54284U_201014_093907/11207611/ccs	chr7	+	2319	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-202	-1145	0	18	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGAGCTTGGGAATGACA	NA	False	NA	NA	False	NA	NA	NA	119339148	119341467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_119339100_119341500
m54284U_201014_093907/112394857/ccs	chr5	+	189	1	Intergenic	novelGene_2839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGTGAGAGCTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	120380600	120380789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_120380600_120380800
m54284U_201014_093907/112591891/ccs	chr12	+	171	1	Intergenic	novelGene_6603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTAAAAAAAAAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	27123679	27123850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_27123700_27123800
m54284U_201014_093907/112722459/ccs	chr2	+	461	1	Intergenic	novelGene_1292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCGGATTGCATGCTGCC	4127	False	NA	NA	False	NA	NA	NA	173086932	173087393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_173086900_173087400
m54284U_201014_093907/112724737/ccs	chr4	+	174	1	Intergenic	novelGene_2131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGAAGTCTAAA	425	False	NA	NA	False	NA	NA	NA	127030597	127030771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_127030600_127030800
m54284U_201014_093907/112984511/ccs	chr10	-	123	1	Intergenic	novelGene_5346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAATCAATCAATCAAT	NA	False	NA	NA	False	NA	NA	NA	62399973	62399850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62399800_62400000
m54284U_201014_093907/113181008/ccs	chr1	+	174	1	Intergenic	novelGene_356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136920433	136920607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_136920400_136920600
m54284U_201014_093907/113247765/ccs	chr2	+	192	1	Intergenic	novelGene_1151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGCAAACTAGGAC	NA	False	NA	NA	False	NA	NA	NA	154918977	154919169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154919000_154919200
m54284U_201014_093907/113378654/ccs	chr2	+	1652	11	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_4	78.6860216302743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5681	False	NA	19	True	AATAAA	-21	NA	22785606	22830278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
m54284U_201014_093907/11338564/ccs	chr9	-	168	1	Intergenic	novelGene_4991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTTTAAAAAAAAGTAAA	8883	False	NA	NA	False	NA	NA	NA	88471400	88471232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_88471200_88471400
m54284U_201014_093907/11338655/ccs	chr18	+	195	1	Intergenic	novelGene_8926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTCTTGAGCATATATA	NA	False	NA	NA	False	NA	NA	NA	38670822	38671017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_38670800_38671000
m54284U_201014_093907/113706780/ccs	chr3	-	4236	17	NIC	ENSMUSG00000027893.15	novel	3863	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_16	186.686903664933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTAGTCGTGTGTCTTT	NA	False	NA	-4	True	ATTAAA	-23	NA	107603876	107570435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603100
m54284U_201014_093907/113836412/ccs	chr11	+	1155	8	NNC	ENSMUSG00000040963.16	novel	672	5	NA	NA	-1580	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	15.9885162870488	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTAGCCTGGTTGTTT	5410	False	NA	NA	False	AAAAAG	-15	NA	69986937	69997013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_69987005_69987627_69987745_69988004_69988101_69988645_69988718_69988878_69988966_69989053_69989200_69996201_69996309_69996550
m54284U_201014_093907/113901901/ccs	chr18	-	361	1	Intergenic	novelGene_9058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGGGTGGTGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	85716416	85716055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_85716100_85716400
m54284U_201014_093907/113902442/ccs	chr19	-	176	1	Intergenic	novelGene_9268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAATGTATAAAAAAAA	5567	False	NA	NA	False	NA	NA	NA	42130423	42130247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_42130200_42130400
m54284U_201014_093907/114034250/ccs	chr4	+	311	1	Intergenic	novelGene_1832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAATCAAGACGCTAAT	NA	False	NA	NA	False	AATGAA	-5	NA	43891688	43891999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_43891700_43892000
m54284U_201014_093907/114230856/ccs	chr17	+	2463	1	FSM	ENSMUSG00000067722.5	ENSMUST00000232784.2	3109	1	0	646	0	-646	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACCTTTGCCCATGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	25403527	25405990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_25403500_25406000
m54284U_201014_093907/114232018/ccs	chr5	+	184	1	Intergenic	novelGene_2682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTCCTATTTTTACCA	NA	False	NA	NA	False	CATAAA	-27	NA	93346132	93346316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_93346100_93346300
m54284U_201014_093907/114294831/ccs	chr11	+	177	1	Intergenic	novelGene_6409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTTAAAAGAAAGAAAGAA	8588	False	NA	NA	False	NA	NA	NA	107034649	107034826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107034600_107034800
m54284U_201014_093907/11471496/ccs	chr5	+	1913	15	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	19.8329760443437	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCCCAAACAGCCTAAG	1557	False	NA	5	True	AAAACA	-8	NA	35915267	36015530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36000511_36000611_36006147_36006250_36014471_36014525_36015169
m54284U_201014_093907/114821757/ccs	chr2	-	138	1	Intergenic	novelGene_1068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTGT	NA	False	NA	NA	False	AATAAA	-10	NA	130462122	130461984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_130462000_130462100
m54284U_201014_093907/114885355/ccs	chr7	+	245	1	Intergenic	novelGene_4022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTACATTATATTTATTC	NA	False	NA	NA	False	NA	NA	NA	109766852	109767097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109766900_109767100
m54284U_201014_093907/114950611/ccs	chr16	+	188	1	Intergenic	novelGene_8134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGTTAAGAGAAAAGGAG	2813	False	NA	NA	False	NA	NA	NA	20115323	20115511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_20115300_20115500
m54284U_201014_093907/115016848/ccs	chr4	-	1270	6	NIC	ENSMUSG00000040795.13	novel	2639	5	NA	NA	0	140	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	35.7960891718635	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCACGCCTTTAATCCC	NA	False	NA	-20	True	NA	NA	NA	129512889	129509411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129509881_129510753_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
m54284U_201014_093907/115081659/ccs	chr9	+	175	1	Intergenic	novelGene_4859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAATTTTAGA	NA	False	NA	NA	False	NA	NA	NA	64168558	64168733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64168600_64168700
m54284U_201014_093907/115083850/ccs	chr2	+	2734	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	118	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	63.6951711665176	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAACTCTGAGAGAA	5001	False	NA	NA	False	ACTAAA	-15	NA	127267118	127278130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201014_093907/115345318/ccs	chr4	+	173	1	Intergenic	novelGene_2172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATTTATTTA	157	False	NA	NA	False	NA	NA	NA	130360340	130360513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_130360300_130360500
m54284U_201014_093907/11535244/ccs	chr13	-	175	1	Intergenic	novelGene_7178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	66007685	66007510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_66007500_66007700
m54284U_201014_093907/115608308/ccs	chr7	+	1819	5	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	206	junction_3	5942.55889221975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAATTGATACTTG	1313	False	NA	-18	True	NA	NA	NA	3707040	3709875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3707064_3707325_3707448_3707644_3708919_3709006_3709181_3709649
m54284U_201014_093907/115671626/ccs	chr1	-	257	1	Intergenic	novelGene_218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTACAACAAATTTATTT	4772	False	NA	NA	False	ACTAAA	-7	NA	84820147	84819890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_84819900_84820100
m54284U_201014_093907/115803420/ccs	chr19	+	2576	4	NIC	ENSMUSG00000071653.10	novel	806	4	NA	NA	0	1746	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	1556.0570540811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTTTTTGTTTTTTTT	NA	False	NA	15	True	NA	NA	NA	8866262	8869991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8866329_8866487_8866683_8867366_8867465_8867774
m54284U_201014_093907/115935414/ccs	chr9	+	5664	5	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	314	junction_4	139.313271083555	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198865	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59221135_59222016
m54284U_201014_093907/115935417/ccs	chr10	-	3992	1	NIC	ENSMUSG00000020078.17	novel	2712	9	NA	NA	27335	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	NA	False	NA	-6	True	AATAAA	-17	NA	62295042	62291050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62291000_62295000
m54284U_201014_093907/11599908/ccs	chr18	+	4310	10	NIC	ENSMUSG00000024576.15	novel	4083	10	NA	NA	0	257	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	613.012254927549	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGAATGAGCCATGAAG	482	False	NA	22	True	AATAAA	-20	NA	61688398	61723389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713547_61720496
m54284U_201014_093907/11600471/ccs	chr6	-	3218	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	56	0	intron_retention	FALSE	canonical	3	8132	junction_6	334.755300348047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	16	True	NA	-9	True	AATAAA	-17	NA	7693198	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682457_7685168_7685407_7689251_7689524_7693108
m54284U_201014_093907/116066133/ccs	chr9	+	184	1	Intergenic	novelGene_5024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	98255686	98255870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_98255700_98255900
m54284U_201014_093907/116129865/ccs	chr9	+	176	1	Intergenic	novelGene_4669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21987028	21987204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_21987000_21987200
m54284U_201014_093907/116327413/ccs	chr16	+	2322	11	NIC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	222	junction_1	22.6680391741324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	388	False	NA	8	True	AATAAA	-22	NA	18066865	18071366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
m54284U_201014_093907/116328823/ccs	chr1	+	191	1	Intergenic	novelGene_124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTATTTATTACATATAA	NA	False	NA	NA	False	NA	NA	NA	54987092	54987283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_54987100_54987300
m54284U_201014_093907/116392611/ccs	chr1	-	1612	2	NNC	ENSMUSG00000039349.6	novel	3035	2	NA	NA	9651	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGCTGTGCCTTCCCT	7149	False	NA	-3	True	AATAAA	-28	NA	184605764	184604122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_184604626_184604655
m54284U_201014_093907/116393350/ccs	chr11	+	185	1	Intergenic	novelGene_5871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTCTTGTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	59244721	59244906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59244700_59244900
m54284U_201014_093907/116394529/ccs	chr17	+	2818	10	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	25	junction_1	113.762368748237	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATATGTGATATACTAT	NA	False	NA	11	True	AATAAA	-19	NA	26357661	26414785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26358016_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
m54284U_201014_093907/116457683/ccs	chr14	-	172	1	Intergenic	novelGene_7545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGCGTTTATAAG	NA	False	NA	NA	False	NA	NA	NA	76185920	76185748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_76185700_76185900
m54284U_201014_093907/116656529/ccs	chr9	-	5834	40	NIC	ENSMUSG00000059495.15	novel	10752	41	NA	NA	-98	-4962	combination_of_known_junctions	FALSE	canonical	2	2	junction_34	6.95330532652203	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCCTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	43017380	42880100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934106_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
m54284U_201014_093907/116787793/ccs	chr5	+	205	1	Intergenic	novelGene_2521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTAGCCAGGTGGTA	NA	False	NA	NA	False	NA	NA	NA	31428112	31428317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_31428100_31428300
m54284U_201014_093907/116787925/ccs	chr2	+	175	1	Intergenic	novelGene_925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTCTGATTACCCAATC	NA	False	NA	NA	False	NA	NA	NA	91067833	91068008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91067800_91068000
m54284U_201014_093907/116851183/ccs	chr18	-	193	1	Intergenic	novelGene_8801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCCTCAGGCTTTAAGC	5210	False	NA	NA	False	NA	NA	NA	6221755	6221562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_6221600_6221800
m54284U_201014_093907/116851966/ccs	chr19	+	1022	1	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	0	-14852	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACGAAAAAAAAAAAAA	5744	False	NA	NA	False	NA	NA	NA	3901796	3902818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_3901800_3902800
m54284U_201014_093907/116852228/ccs	chr18	+	176	1	Intergenic	novelGene_8854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAATCTGCGCCA	NA	False	NA	NA	False	NA	NA	NA	31842873	31843049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_31842900_31843000
m54284U_201014_093907/117050159/ccs	chr11	-	195	1	Intergenic	novelGene_5864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGGACCCTGGTCCTA	NA	False	NA	NA	False	NA	NA	NA	57965657	57965462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57965500_57965700
m54284U_201014_093907/117179287/ccs	chr7	+	190	1	Intergenic	novelGene_3776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAACACTACAGGCCA	6402	False	NA	NA	False	NA	NA	NA	29914934	29915124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29914900_29915100
m54284U_201014_093907/11731322/ccs	chr1	+	180	1	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGCACTTGAAATAATAA	7220	False	NA	NA	False	NA	NA	NA	10066483	10066663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_10066500_10066700
m54284U_201014_093907/117375690/ccs	chr11	+	176	1	Intergenic	novelGene_6005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	75324730	75324906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75324700_75324900
m54284U_201014_093907/117441077/ccs	chr11	+	196	1	Intergenic	novelGene_5890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGCTAGGTGAAATCTG	497	False	NA	NA	False	NA	NA	NA	60778079	60778275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_60778100_60778300
m54284U_201014_093907/117442960/ccs	chr2	+	3149	12	NIC	ENSMUSG00000059316.3	novel	4054	13	NA	NA	53	-1067	intron_retention	FALSE	canonical	3	138	junction_1	13.7396091467018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGACAGCCTGGCTCCT	NA	False	NA	28	True	AATAAA	-20	NA	29692698	29706467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
m54284U_201014_093907/117508063/ccs	chr9	+	174	1	Intergenic	novelGene_5113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTTAAAAGAATATATAG	NA	False	NA	NA	False	NA	NA	NA	110437395	110437569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_110437400_110437600
m54284U_201014_093907/117573000/ccs	chr4	+	158	1	Intergenic	novelGene_1758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	16850554	16850712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_16850600_16850700
m54284U_201014_093907/117705074/ccs	chr1	+	196	1	Intergenic	novelGene_418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGCGCAAGTGAGTTCC	NA	False	NA	NA	False	NA	NA	NA	157052865	157053061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_157052900_157053100
m54284U_201014_093907/117769314/ccs	chr4	-	3632	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_18	81.3382663956327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7420	False	NA	-6	True	TATAAA	-12	NA	155753655	155739139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
m54284U_201014_093907/117834940/ccs	chr9	+	2980	23	NNC	ENSMUSG00000038379.16	novel	2871	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	72.2671238536767	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGGTCAGTTTCTTCA	NA	False	NA	13	True	AATAAA	-24	NA	83716742	83754442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83726402_83726485_83727969_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
m54284U_201014_093907/117899676/ccs	chr9	-	2802	1	Antisense	novelGene_ENSMUSG00000020257.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTTTTGTTACCAATC	6294	False	NA	NA	False	ATTAAA	-8	NA	106060212	106057410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_106057400_106060200
m54284U_201014_093907/117966650/ccs	chr10	+	154	1	Intergenic	novelGene_5471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	6889	False	NA	NA	False	NA	NA	NA	82185224	82185378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_82185200_82185400
m54284U_201014_093907/117966827/ccs	chr4	+	183	1	Intergenic	novelGene_2304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGGTTTTTTTTTTTT	5930	False	NA	NA	False	NA	NA	NA	141113032	141113215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141113000_141113200
m54284U_201014_093907/11798219/ccs	chr10	-	149	1	Intergenic	novelGene_5322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	60605271	60605122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_60605100_60605300
m54284U_201014_093907/11798324/ccs	chr9	+	177	1	Intergenic	novelGene_5072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTTACATATCA	NA	False	NA	NA	False	NA	NA	NA	107524522	107524699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_107524500_107524700
m54284U_201014_093907/118098373/ccs	chr9	+	226	1	Intergenic	novelGene_4782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCCGGGTGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	55049419	55049645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_55049400_55049600
m54284U_201014_093907/1182091/ccs	chr4	+	222	1	Intergenic	novelGene_2440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCATCATTAAAAGTAAG	NA	False	NA	NA	False	NA	NA	NA	156109178	156109400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156109200_156109400
m54284U_201014_093907/118229046/ccs	chr4	+	4173	18	NIC	ENSMUSG00000028613.16	novel	3291	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	26.5350848245035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659457	107731096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107705477_107705601_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
m54284U_201014_093907/118555718/ccs	chr9	+	195	1	Intergenic	novelGene_5128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCGATCGGGGCTGAAGT	8162	False	NA	NA	False	NA	NA	NA	114409670	114409865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_114409700_114409900
m54284U_201014_093907/11863510/ccs	chr19	-	183	1	Intergenic	novelGene_9071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGATCATTTCAG	NA	False	NA	NA	False	NA	NA	NA	3819665	3819482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_3819500_3819700
m54284U_201014_093907/11863866/ccs	chr2	+	170	1	Intergenic	novelGene_1073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTCCTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	130891086	130891256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_130891100_130891300
m54284U_201014_093907/119147272/ccs	chr11	+	178	1	Intergenic	novelGene_6465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATTCCAAAAAGG	1163	False	NA	NA	False	NA	NA	NA	115984003	115984181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115984000_115984200
m54284U_201014_093907/11928333/ccs	chr2	+	208	1	Intergenic	novelGene_885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGGAAACCCAAACAAAG	NA	False	NA	NA	False	NA	NA	NA	80352414	80352622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_80352400_80352600
m54284U_201014_093907/11929151/ccs	chr18	+	191	1	Intergenic	novelGene_9001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	370	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGTATGTTTACATT	NA	False	NA	NA	False	NA	NA	NA	67738711	67738902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_67738700_67738900
m54284U_201014_093907/11929358/ccs	chr12	-	249	1	Intergenic	novelGene_6922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGTGTGACCACAA	7269	False	NA	NA	False	NA	NA	NA	111531323	111531074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111531100_111531300
m54284U_201014_093907/11930101/ccs	chr11	-	2371	13	NNC	ENSMUSG00000020917.18	novel	4393	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_12	1050.92835943592	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTGATGCTCTTTTATG	1749	False	NA	-17	True	AATAAA	-15	NA	100385025	100367181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100384973
m54284U_201014_093907/119406624/ccs	chr11	+	178	1	Intergenic	novelGene_6354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATTAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	102647741	102647919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_102647700_102647900
m54284U_201014_093907/119472274/ccs	chrX	-	169	1	Intergenic	novelGene_9398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAAAAGGGGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	13099247	13099078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_13099100_13099200
m54284U_201014_093907/119670635/ccs	chr4	+	224	1	Intergenic	novelGene_1936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCGGGTCAGAGGGAAA	NA	False	NA	NA	False	ATTAAA	-6	NA	94578260	94578484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_94578300_94578500
m54284U_201014_093907/11995262/ccs	chr2	-	205	1	Intergenic	novelGene_782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATTAAAATTCTGCAGT	NA	False	NA	NA	False	NA	NA	NA	41373579	41373374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_41373400_41373600
m54284U_201014_093907/120193743/ccs	chr13	+	181	1	Intergenic	novelGene_7193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	67993710	67993891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_67993700_67993900
m54284U_201014_093907/120195268/ccs	chr7	-	2325	12	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1236	junction_8	113.43276306049	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
m54284U_201014_093907/120258678/ccs	chr16	+	233	1	Intergenic	novelGene_8234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCAAGCTGAGCACAAA	674	False	NA	NA	False	NA	NA	NA	34650626	34650859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_34650600_34650900
m54284U_201014_093907/120455568/ccs	chr8	+	189	1	Intergenic	novelGene_4395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTCAGAGCATGAAAAG	4327	False	NA	NA	False	NA	NA	NA	88810851	88811040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_88810900_88811000
m54284U_201014_093907/120717618/ccs	chr2	+	215	1	Intergenic	novelGene_1294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATTTCTGTGTGTATG	NA	False	NA	NA	False	NA	NA	NA	174237243	174237458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_174237200_174237500
m54284U_201014_093907/120848687/ccs	chrX	-	167	1	Intergenic	novelGene_9481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTGCAAAAAAAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	59173368	59173201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_59173200_59173400
m54284U_201014_093907/121045500/ccs	chr5	+	159	1	Intergenic	novelGene_2829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	118520201	118520360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_118520200_118520400
m54284U_201014_093907/121047403/ccs	chr3	+	178	1	Intergenic	novelGene_1390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACACCTGTG	NA	False	NA	NA	False	NA	NA	NA	49395639	49395817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_49395600_49395800
m54284U_201014_093907/121112643/ccs	chr13	+	173	1	Intergenic	novelGene_7300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCAAATATTTAAA	NA	False	NA	NA	False	NA	NA	NA	111533201	111533374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_111533200_111533400
m54284U_201014_093907/121176919/ccs	chr4	-	183	1	Intergenic	novelGene_2254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGAGTGTGGTGT	7531	False	NA	NA	False	NA	NA	NA	135980565	135980382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135980400_135980600
m54284U_201014_093907/121308799/ccs	chr18	-	191	1	Intergenic	novelGene_8837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTGTGGAGGTATACC	NA	False	NA	NA	False	NA	NA	NA	21128042	21127851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_21127900_21128000
m54284U_201014_093907/121375419/ccs	chr6	+	183	1	Intergenic	novelGene_3498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAGGGCAGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	124780908	124781091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_124780900_124781100
m54284U_201014_093907/121440623/ccs	chr6	+	175	1	Intergenic	novelGene_3472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACACACTCTACCGAA	NA	False	NA	NA	False	NA	NA	NA	122232236	122232411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_122232200_122232400
m54284U_201014_093907/121506321/ccs	chr1	+	2400	14	NIC	ENSMUSG00000038305.16	novel	2315	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	16.1274509627595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57813893	57986124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_57813961_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
m54284U_201014_093907/121832783/ccs	chr19	-	3630	16	NIC	ENSMUSG00000056917.14	novel	3812	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_15	18.9743686763662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGTTTAAAAAAAAGAAAC	8144	False	NA	-42	True	AAGAAA	-11	NA	5713688	5701254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711687_5713631
m54284U_201014_093907/121834005/ccs	chr10	+	182	1	Intergenic	novelGene_5443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAACAAAAAC	2954	False	NA	NA	False	NA	NA	NA	79877464	79877646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_79877500_79877600
m54284U_201014_093907/121834224/ccs	chr8	+	171	1	Intergenic	novelGene_4201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	12469571	12469742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_12469600_12469700
m54284U_201014_093907/12191312/ccs	chr1	+	204	1	Intergenic	novelGene_458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTTTTAGTATGGAGT	NA	False	NA	NA	False	NA	NA	NA	167143448	167143652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_167143400_167143700
m54284U_201014_093907/12192100/ccs	chr1	-	175	1	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGGAAGATATAA	NA	False	NA	NA	False	NA	NA	NA	6278448	6278273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_6278300_6278400
m54284U_201014_093907/122160383/ccs	chr10	+	1396	4	NIC	ENSMUSG00000020307.16	novel	1266	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1645	junction_3	181.846699783698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAGAATCACCTAGGA	NA	False	NA	21	True	AATAAA	-21	NA	79518028	79524232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79518425_79520651_79520739_79520838_79521202_79523682
m54284U_201014_093907/122814815/ccs	chr4	+	1604	1	NIC	ENSMUSG00000028948.17	novel	2419	6	NA	NA	0	-11290	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAG	7354	False	NA	NA	False	NA	NA	NA	152123792	152125396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_152123800_152125400
m54284U_201014_093907/123012823/ccs	chr11	-	176	1	Intergenic	novelGene_5886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAACAACTTTC	1861	False	NA	NA	False	NA	NA	NA	60694021	60693845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_60693800_60694000
m54284U_201014_093907/123013825/ccs	chr19	+	2457	11	NIC	ENSMUSG00000004054.10	novel	441	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	27.36439292219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738769	5752893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_5738859_5739504_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
m54284U_201014_093907/123208501/ccs	chr4	+	186	1	Intergenic	novelGene_1771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAAATCAGGTGCAGA	NA	False	NA	NA	False	NA	NA	NA	21954804	21954990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_21954800_21955000
m54284U_201014_093907/12321359/ccs	chr2	+	174	1	Intergenic	novelGene_1150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATAAAATGAAAT	7453	False	NA	NA	False	NA	NA	NA	154900475	154900649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154900500_154900600
m54284U_201014_093907/123536825/ccs	chr2	+	2566	2	NNC	ENSMUSG00000078875.11	novel	1749	4	NA	NA	-129342	-3160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATTAAGAATTTCATT	NA	False	NA	NA	False	NA	NA	NA	176563406	176698711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_176563555_176696293
m54284U_201014_093907/123537662/ccs	chr11	+	3770	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	220.243692358416	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115715850_115716079_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
m54284U_201014_093907/123667315/ccs	chr2	+	175	1	Intergenic	novelGene_1116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAGATTCTGGGC	NA	False	NA	NA	False	NA	NA	NA	151927958	151928133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_151928000_151928100
m54284U_201014_093907/123667899/ccs	chr8	+	181	1	NIC	ENSMUSG00000097424.3	novel	618	3	NA	NA	3774	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCACAACCAACCTGCGG	NA	False	NA	NA	False	NA	NA	NA	122274900	122275081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_122274900_122275100
m54284U_201014_093907/123798380/ccs	chr10	+	177	1	Intergenic	novelGene_5258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGAAAGAAAGAA	6407	False	NA	NA	False	NA	NA	NA	37003459	37003636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_37003500_37003600
m54284U_201014_093907/12387806/ccs	chr5	+	1562	1	Antisense	novelGene_ENSMUSG00000054280.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTGGGGGGACTAGAG	NA	False	NA	NA	False	NA	NA	NA	33008736	33010298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_33008700_33010300
m54284U_201014_093907/124192944/ccs	chr4	+	155	1	Intergenic	novelGene_2158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAATAAATAAAATTTAA	3160	False	NA	NA	False	NA	NA	NA	129578803	129578958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129578800_129579000
m54284U_201014_093907/124257712/ccs	chr17	-	179	1	Intergenic	novelGene_8786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTCATCTCAAAAG	NA	False	NA	NA	False	NA	NA	NA	88949877	88949698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_88949700_88949900
m54284U_201014_093907/124258170/ccs	chr14	+	4522	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_41	204.715751628696	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
m54284U_201014_093907/124258525/ccs	chr18	+	189	1	Intergenic	novelGene_8958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTCACATATAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	51467556	51467745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_51467600_51467700
m54284U_201014_093907/124585756/ccs	chr11	+	179	1	Intergenic	novelGene_6159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	86712666	86712845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_86712700_86712800
m54284U_201014_093907/1247431/ccs	chr12	-	584	6	NIC	ENSMUSG00000061477.5	novel	954	7	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	1048	junction_2	5002.98581249238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTGTAGTAACTTGT	NA	False	NA	-11	True	AATAAA	-15	NA	28685877	28681082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_28681193_28681622_28681774_28684207_28684352_28685414_28685487_28685578_28685663_28685854
m54284U_201014_093907/124977168/ccs	chr13	-	178	1	Intergenic	novelGene_7232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTAAGACAACTG	NA	False	NA	-1	True	NA	NA	NA	91665233	91665055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_91665100_91665200
m54284U_201014_093907/125044559/ccs	chr3	+	2823	1	Antisense	novelGene_ENSMUSG00000001017.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAAATCGAACACCCA	NA	False	NA	NA	False	NA	NA	NA	90413240	90416063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_90413200_90416100
m54284U_201014_093907/125109839/ccs	chr1	+	110	1	Intergenic	novelGene_424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGGTTGCCTGTAGAA	NA	False	NA	6	True	AATAAA	-32	NA	159121661	159121771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_159121700_159121800
m54284U_201014_093907/125110980/ccs	chr10	+	173	1	Intergenic	novelGene_5277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATGCCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	41555734	41555907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_41555700_41555900
m54284U_201014_093907/12517605/ccs	chr13	+	157	1	Intergenic	novelGene_7074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAACAAATAAATTT	NA	False	NA	NA	False	NA	NA	NA	51990320	51990477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_51990300_51990500
m54284U_201014_093907/125240070/ccs	chr10	+	189	1	Intergenic	novelGene_5184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTTAAAGTTTTAAAATT	NA	False	NA	NA	False	NA	NA	NA	7384334	7384523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_7384300_7384500
m54284U_201014_093907/125569613/ccs	chr6	+	169	1	Intergenic	novelGene_3543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAATAGATAGATAA	NA	False	NA	NA	False	NA	NA	NA	134362571	134362740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_134362600_134362700
m54284U_201014_093907/125831392/ccs	chr11	+	187	1	Intergenic	novelGene_6062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATAGTGGGTGG	3970	False	NA	NA	False	NA	NA	NA	78077200	78077387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_78077200_78077400
m54284U_201014_093907/12583420/ccs	chr13	+	716	1	Intergenic	novelGene_7077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	53265764	53266480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_53265800_53266500
m54284U_201014_093907/12583894/ccs	chr7	-	177	1	Intergenic	novelGene_4163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTTATTTATTTA	5139	False	NA	NA	False	NA	NA	NA	140782710	140782533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_140782500_140782700
m54284U_201014_093907/126027438/ccs	chr4	+	187	1	Intergenic	novelGene_2418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGGGGCTTTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	154280626	154280813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_154280600_154280800
m54284U_201014_093907/126028256/ccs	chr2	+	196	1	Intergenic	novelGene_1317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGCATTCACTGATAAG	NA	False	NA	NA	False	NA	NA	NA	180357095	180357291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_180357100_180357300
m54284U_201014_093907/126222948/ccs	chr4	+	176	1	Intergenic	novelGene_1841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACTCATAAGAAA	NA	False	NA	NA	False	NA	NA	NA	44861888	44862064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_44861900_44862100
m54284U_201014_093907/126223371/ccs	chr6	-	199	1	Intergenic	novelGene_3481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAAAGCATTTGCCT	7311	False	NA	NA	False	AAGAAA	-5	NA	122650469	122650270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122650300_122650500
m54284U_201014_093907/126355253/ccs	chr6	-	485	4	NNC	ENSMUSG00000030042.16	novel	1769	4	NA	NA	16614	112	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_3	429.604727886254	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGTGTTTTATATTGC	NA	False	NA	-1	True	AATAAA	-19	NA	82665732	82624711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_82625018_82628417_82628460_82629063_82629149_82665680
m54284U_201014_093907/126551307/ccs	chr7	+	267	1	Intergenic	novelGene_3914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTTTAATGCTCAGA	1786	False	NA	NA	False	ATTAAA	-25	NA	79892889	79893156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79892900_79893200
m54284U_201014_093907/126616831/ccs	chr11	+	205	1	Intergenic	novelGene_6279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACACCCGTATAGAT	NA	False	NA	NA	False	NA	NA	NA	97537590	97537795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97537600_97537800
m54284U_201014_093907/126746755/ccs	chr2	+	189	1	Intergenic	novelGene_865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTTATGTGTATGTAC	NA	False	NA	NA	False	NA	NA	NA	73736850	73737039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_73736800_73737000
m54284U_201014_093907/126812262/ccs	chr9	+	168	1	Intergenic	novelGene_5155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGGTTGGTTGGT	NA	False	NA	NA	False	NA	NA	NA	121083428	121083596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_121083400_121083600
m54284U_201014_093907/126813210/ccs	chr6	+	173	1	Intergenic	novelGene_3120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	28102240	28102413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_28102200_28102400
m54284U_201014_093907/126943705/ccs	chr1	+	184	1	Intergenic	novelGene_498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	178221303	178221487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_178221300_178221500
m54284U_201014_093907/126945474/ccs	chr6	+	4604	14	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	41.3643072849016	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTGGGGTGTTTGTTTT	NA	False	NA	15	True	AATAAA	-20	NA	146626492	146680310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668181_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
m54284U_201014_093907/127010823/ccs	chr2	+	3483	1	Antisense	novelGene_ENSMUSG00000027272.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATGTTCCTAGTGCCTA	9989	False	NA	NA	False	AATAAA	-29	NA	120702990	120706473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_120703000_120706500
m54284U_201014_093907/12715568/ccs	chr11	-	183	1	Intergenic	novelGene_5712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCCAATAAAAAAAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	19954395	19954212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_19954200_19954400
m54284U_201014_093907/127271767/ccs	chr16	+	164	1	Intergenic	novelGene_8222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATCTGCATCCG	NA	False	NA	NA	False	NA	NA	NA	32875861	32876025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_32875900_32876000
m54284U_201014_093907/127469241/ccs	chr7	-	178	1	Intergenic	novelGene_4023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGAATGTCTCTC	7172	False	NA	NA	False	NA	NA	NA	109801073	109800895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_109800900_109801100
m54284U_201014_093907/127533897/ccs	chr5	+	177	1	Intergenic	novelGene_2931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128173289	128173466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_128173300_128173500
m54284U_201014_093907/127535703/ccs	chr8	+	145	1	Intergenic	novelGene_4417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	96259804	96259949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_96259800_96259900
m54284U_201014_093907/127861599/ccs	chr5	-	192	1	Intergenic	novelGene_2881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAAAAAAAATTAAAGTT	NA	False	NA	NA	False	NA	NA	NA	123431440	123431248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123431200_123431400
m54284U_201014_093907/127926350/ccs	chr1	+	202	1	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCACACACATTAAACAAA	NA	False	NA	NA	False	NA	NA	NA	36344698	36344900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36344700_36344900
m54284U_201014_093907/127927013/ccs	chr11	+	178	1	Intergenic	novelGene_5984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCGAGAAGGTGCACAT	NA	False	NA	NA	False	NA	NA	NA	73042322	73042500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_73042300_73042500
m54284U_201014_093907/127993539/ccs	chr5	+	181	1	Intergenic	novelGene_2826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTGGTGGTGGTACAT	NA	False	NA	NA	False	NA	NA	NA	117960377	117960558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_117960400_117960600
m54284U_201014_093907/128190610/ccs	chr19	+	4958	1	Antisense	novelGene_ENSMUSG00000024758.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAGACAGAGAGATACC	NA	False	NA	NA	False	NA	NA	NA	7442042	7447000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_+_7442000_7447000
m54284U_201014_093907/128255114/ccs	chr9	-	173	1	Intergenic	novelGene_5111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAAGTATCCTTG	NA	False	NA	NA	False	NA	NA	NA	110368590	110368417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_110368400_110368600
m54284U_201014_093907/128846093/ccs	chr16	+	1644	10	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	0	170	combination_of_known_junctions	TRUE	non_canonical	0	0	junction_7	1284.5748203728	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTTCACAAAATTCCTA	NA	False	NA	-7	True	NA	NA	NA	84571010	84620088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615645_84615664_84618147_84618191_84619674
m54284U_201014_093907/128911242/ccs	chr6	+	2987	10	NIC	ENSMUSG00000046679.17	novel	2630	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9.7182531580755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCATTGATGTCATGA	1771	False	NA	NA	False	AATAAA	-26	NA	86415673	86447370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86416241_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
m54284U_201014_093907/128975219/ccs	chr4	+	179	1	Intergenic	novelGene_1947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATACCTCAACCTATCAC	NA	False	NA	NA	False	NA	NA	NA	99529106	99529285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_99529100_99529300
m54284U_201014_093907/129237507/ccs	chr5	+	216	1	Intergenic	novelGene_3017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGCTGGGCTGAAGG	NA	False	NA	NA	False	NA	NA	NA	140251578	140251794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_140251600_140251800
m54284U_201014_093907/129369906/ccs	chr5	+	3451	1	Intergenic	novelGene_3081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCAACCAAGAGACTCGA	7389	False	NA	NA	False	NA	NA	NA	148310595	148314046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_148310600_148314000
m54284U_201014_093907/129433941/ccs	chr5	+	170	1	Intergenic	novelGene_3028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTTTTTAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	141378385	141378555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_141378400_141378600
m54284U_201014_093907/129761332/ccs	chr5	-	3556	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_30	59.8322562577151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	134485131	134386516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
m54284U_201014_093907/129761561/ccs	chr4	-	2361	11	NIC	ENSMUSG00000028766.11	novel	2522	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	49	junction_10	469.73486138459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGAGTCTTTGTGGTC	NA	False	NA	-2	True	AATAAA	-24	NA	137523695	137469043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482395_137482512_137482940_137483061_137523552
m54284U_201014_093907/12977608/ccs	chrX	-	2336	6	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	86.1519587705352	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510968_69520583
m54284U_201014_093907/129827797/ccs	chr2	-	188	1	Intergenic	novelGene_756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAGAGTGAGTGCATA	1220	False	NA	NA	False	NA	NA	NA	34691341	34691153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34691200_34691300
m54284U_201014_093907/129827809/ccs	chrX	-	178	1	Intergenic	novelGene_9653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTATGGTC	NA	False	NA	NA	False	NA	NA	NA	143072077	143071899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_143071900_143072100
m54284U_201014_093907/129957984/ccs	chr6	+	3472	1	Intergenic	novelGene_3339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTCTGATGAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	82695284	82698756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_82695300_82698800
m54284U_201014_093907/130024750/ccs	chr3	+	3163	3	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	0	-71	intron_retention	FALSE	canonical	3	53	junction_1	1625	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGCAGTGCAACTGTTTT	NA	False	NA	-58	True	NA	NA	NA	89995367	90008132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_89997167_89997320_89997387_90006834
m54284U_201014_093907/130155215/ccs	chrX	+	189	1	Intergenic	novelGene_9639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTGGGCAGCCAGACA	NA	False	NA	NA	False	NA	NA	NA	135160285	135160474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_135160300_135160500
m54284U_201014_093907/130157274/ccs	chr12	+	1079	1	ISM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	851	1870	851	-1870	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCCATTGCTTTTTGTAC	NA	False	NA	NA	False	NA	NA	NA	102710871	102711950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_102710900_102712000
m54284U_201014_093907/130220420/ccs	chr4	+	187	1	Intergenic	novelGene_2093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTGACTAGTTCCACT	4314	False	NA	NA	False	NA	NA	NA	123952295	123952482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_123952300_123952500
m54284U_201014_093907/130416971/ccs	chr12	-	175	1	Intergenic	novelGene_6788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTCACCGACACA	NA	False	NA	NA	False	NA	NA	NA	83748375	83748200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_83748200_83748400
m54284U_201014_093907/130418610/ccs	chr11	+	1401	1	Intergenic	novelGene_5797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAAGAGCAGCGTCTGT	NA	False	NA	NA	False	NA	NA	NA	49734210	49735611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_49734200_49735600
m54284U_201014_093907/130418742/ccs	chr3	+	207	1	Intergenic	novelGene_1674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCACCTTGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	127251490	127251697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_127251500_127251700
m54284U_201014_093907/130614133/ccs	chr6	+	170	1	Intergenic	novelGene_3314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATATTTAAAAGAA	5125	False	NA	NA	False	NA	NA	NA	70854588	70854758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_70854600_70854800
m54284U_201014_093907/130680252/ccs	chr12	-	3515	20	NNC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	-73	0	intron_retention	FALSE	canonical	3	12	junction_18	51.1991927741075	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTTTTGTCTTTCA	NA	False	NA	-1	True	AATAAA	-21	NA	100487158	100267028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461696_100466334_100466490_100486829
m54284U_201014_093907/130877248/ccs	chr2	+	4862	1	FSM	ENSMUSG00000065287.3	ENSMUST00000083353.3	133	1	-1791	-2938	-1791	2938	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATGTGTGTATTTTGT	NA	False	NA	25	True	AATAAA	-14	NA	130116365	130121227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_130116400_130121200
m54284U_201014_093907/131007482/ccs	chr9	+	2282	4	NIC	ENSMUSG00000037845.15	novel	2658	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_2	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTCTGGACTCTTGTG	NA	False	NA	2	True	AAAAAG	-17	NA	50679550	50683969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_50679756_50679987_50680145_50681409_50682091_50682730
m54284U_201014_093907/13110044/ccs	chr5	+	2759	1	Intergenic	novelGene_2496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	25868017	25870776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_25868000_25870800
m54284U_201014_093907/131468109/ccs	chr14	-	191	1	Intergenic	novelGene_7483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATAGCAAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	57109341	57109150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_57109200_57109300
m54284U_201014_093907/131597262/ccs	chrX	+	170	1	Intergenic	novelGene_9535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	93133185	93133355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_93133200_93133400
m54284U_201014_093907/131599075/ccs	chr5	+	177	1	Intergenic	novelGene_2512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCAGTAA	NA	False	NA	NA	False	NA	NA	NA	30986980	30987157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_30987000_30987200
m54284U_201014_093907/131728639/ccs	chr5	+	5139	21	NIC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	93.4566610788124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8411	False	NA	5	True	AATAAA	-15	NA	64387636	64508824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64441309_64441469_64442032_64442153_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
m54284U_201014_093907/131793165/ccs	chr2	+	195	1	Intergenic	novelGene_1220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAACCAAAAACCAGAACT	4378	False	NA	NA	False	NA	NA	NA	164719705	164719900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_164719700_164719900
m54284U_201014_093907/131859240/ccs	chr17	-	187	1	Intergenic	novelGene_8408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAATAAATGAAGTGATG	NA	False	NA	NA	False	NA	NA	NA	24352180	24351993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24352000_24352200
m54284U_201014_093907/131859438/ccs	chr2	+	2118	10	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	44	junction_6	1048.09454384588	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130119395_130119545_130119768_130119891_130120079_130120211_130120332
m54284U_201014_093907/132055334/ccs	chr4	-	559	2	Intergenic	novelGene_2171	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	130362533	130359667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_130360111_130362417
m54284U_201014_093907/132120637/ccs	chr1	+	199	1	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCTTGAAGCAACAAG	NA	False	NA	NA	False	NA	NA	NA	33757021	33757220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_33757000_33757200
m54284U_201014_093907/132123104/ccs	chr15	+	173	1	Intergenic	novelGene_7743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAGAGAGAGGAGA	NA	False	NA	NA	False	NA	NA	NA	65584413	65584586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_65584400_65584600
m54284U_201014_093907/132252492/ccs	chr6	+	175	1	Intergenic	novelGene_3156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAAGTAGTT	NA	False	NA	NA	False	NA	NA	NA	30537391	30537566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_30537400_30537600
m54284U_201014_093907/132319030/ccs	chr9	-	158	1	Intergenic	novelGene_4855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	63720374	63720216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_63720200_63720400
m54284U_201014_093907/132385536/ccs	chr12	+	178	1	Intergenic	novelGene_6709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTCCTTATTTTAATC	NA	False	NA	1	True	NA	NA	NA	71861862	71862040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_71861900_71862000
m54284U_201014_093907/132580147/ccs	chr4	+	148	1	Intergenic	novelGene_1757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAATGAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	16010130	16010278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_16010100_16010300
m54284U_201014_093907/132582219/ccs	chr10	-	192	1	Intergenic	novelGene_5601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTTTTTTTCGAGA	NA	False	NA	-5	True	NA	NA	NA	127150993	127150801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127150800_127151000
m54284U_201014_093907/132647532/ccs	chr11	+	176	1	Intergenic	novelGene_6470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	116167235	116167411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_116167200_116167400
m54284U_201014_093907/132908146/ccs	chr5	+	164	1	Intergenic	novelGene_3001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	137596612	137596776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137596600_137596800
m54284U_201014_093907/132909522/ccs	chr5	-	173	1	Intergenic	novelGene_2628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTGGAGAGCCT	NA	False	NA	NA	False	NA	NA	NA	77057373	77057200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77057200_77057400
m54284U_201014_093907/132972928/ccs	chr8	+	2608	13	NNC	ENSMUSG00000031629.15	novel	3010	14	NA	NA	0	-292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.308487071679	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGTGTTAACAGTTCAC	NA	False	NA	NA	False	AATAAA	-19	NA	47005089	47032750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_47005163_47007049_47007099_47009120_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
m54284U_201014_093907/133038/ccs	chr5	+	176	1	Antisense	novelGene_ENSMUSG00000029623.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGTTAAACAGT	NA	False	NA	NA	False	NA	NA	NA	145070162	145070338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_145070200_145070300
m54284U_201014_093907/13305594/ccs	chr12	+	3748	10	NIC	ENSMUSG00000020571.14	novel	2125	13	NA	NA	0	-405	intron_retention	FALSE	canonical	3	2594	junction_6	185.266441432299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAATGCTGATAAATGTA	NA	False	NA	9	True	AATAAA	-11	NA	17316595	17334366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
m54284U_201014_093907/133105997/ccs	chr9	+	189	1	Intergenic	novelGene_4663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATACCAGAAAGATACCAAA	NA	False	NA	NA	False	NA	NA	NA	21423067	21423256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_21423100_21423300
m54284U_201014_093907/133366771/ccs	chr19	+	4255	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	728	junction_3	74.8924228477087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	3469	False	NA	20	True	AATAAA	-24	NA	8919238	8929667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8927754_8928275_8928395_8928499_8928649_8928853
m54284U_201014_093907/133397/ccs	chr1	-	191	1	Intergenic	novelGene_419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGATAGTAATCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	157164157	157163966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_157164000_157164200
m54284U_201014_093907/133497191/ccs	chr11	-	1527	7	NNC	ENSMUSG00000020530.15	novel	386	4	NA	NA	54	551	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_6	234.574378159442	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTTTTGTTTGTAT	NA	False	NA	0	True	ATTAAA	-16	NA	84761263	84742656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761186
m54284U_201014_093907/133562473/ccs	chr3	-	197	1	Intergenic	novelGene_1536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTATGGCAGCCTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	90062649	90062452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90062500_90062600
m54284U_201014_093907/133759684/ccs	chr1	+	2447	1	NIC	ENSMUSG00000026433.14	novel	1202	5	NA	NA	0	-1293	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131794977	131797424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_131795000_131797400
m54284U_201014_093907/133824743/ccs	chr16	+	167	1	Intergenic	novelGene_8233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTTTTAAAAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	34476764	34476931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_34476800_34476900
m54284U_201014_093907/133825574/ccs	chr10	+	202	1	Intergenic	novelGene_5331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTTTTTGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	61194996	61195198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61195000_61195200
m54284U_201014_093907/133826776/ccs	chr12	+	204	1	Intergenic	novelGene_6759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAGGTTAAAAAAAGATAT	NA	False	NA	NA	False	AAGAAA	-5	NA	80543057	80543261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_80543100_80543300
m54284U_201014_093907/134154965/ccs	chr2	-	197	1	Intergenic	novelGene_1253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCAGCCTCCGGCTGAGC	NA	False	NA	NA	False	NA	NA	NA	167674299	167674102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_167674100_167674300
m54284U_201014_093907/134220456/ccs	chr17	+	5465	25	NIC	ENSMUSG00000023805.18	novel	4808	26	NA	NA	0	-82	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	4.82974004361403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGTTTCTTGGGTCTGT	NA	False	NA	NA	False	NA	NA	NA	6025915	6089534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058375_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
m54284U_201014_093907/134416466/ccs	chr9	+	3759	1	Intergenic	novelGene_4801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCTACTTAAGCTCCAAAG	6304	False	NA	NA	False	NA	NA	NA	57547781	57551540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_57547800_57551500
m54284U_201014_093907/134417164/ccs	chr4	+	208	1	Intergenic	novelGene_1803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTAGGGCTGAATTGTCA	NA	False	NA	NA	False	NA	NA	NA	38983272	38983480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_38983300_38983500
m54284U_201014_093907/134480712/ccs	chr8	+	175	1	Intergenic	novelGene_4267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	34467451	34467626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_34467500_34467600
m54284U_201014_093907/134481390/ccs	chr8	-	176	1	Intergenic	novelGene_4607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTAAAAGTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	126650366	126650190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_126650200_126650400
m54284U_201014_093907/134613435/ccs	chr2	+	168	1	Intergenic	novelGene_1208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAAAAAGCACT	NA	False	NA	NA	False	NA	NA	NA	163490297	163490465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_163490300_163490500
m54284U_201014_093907/134678650/ccs	chr17	+	2620	14	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	473.577646202023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88028310_88028487_88030758
m54284U_201014_093907/134874647/ccs	chr5	-	181	1	Intergenic	novelGene_2603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTTTAAAAAAATTTAAT	NA	False	NA	NA	False	NA	NA	NA	66843235	66843054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_66843100_66843200
m54284U_201014_093907/134874896/ccs	chr7	+	195	1	Intergenic	novelGene_3862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGGACTGTTTTCAAT	NA	False	NA	NA	False	NA	NA	NA	49326073	49326268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_49326100_49326300
m54284U_201014_093907/13501511/ccs	chr9	-	4628	5	NIC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	-51	0	intron_retention	FALSE	canonical	3	101	junction_2	28.4725745235657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375394	57348609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375215
m54284U_201014_093907/135070261/ccs	chr11	+	3246	3	NIC	ENSMUSG00000037750.17	novel	3358	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	20.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAATGCCTGCGTGTGT	NA	False	NA	2	True	TTTAAA	-17	NA	78006431	78047526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78006664_78033918_78034041_78044634
m54284U_201014_093907/135136951/ccs	chr9	+	202	1	Intergenic	novelGene_4824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAAATACCGTCTCTCT	8099	False	NA	NA	False	AATAAA	-17	NA	59323265	59323467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59323300_59323500
m54284U_201014_093907/135202661/ccs	chr19	+	1114	1	Antisense	novelGene_ENSMUSG00000025077.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTCT	NA	False	NA	NA	False	NA	NA	NA	56535465	56536579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_+_56535500_56536600
m54284U_201014_093907/135331869/ccs	chr6	+	4603	1	Intergenic	novelGene_3160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCCC	4815	False	NA	NA	False	NA	NA	NA	32973100	32977703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_32973100_32977700
m54284U_201014_093907/135528972/ccs	chrX	-	175	1	Intergenic	novelGene_9636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTGGGATAATAT	4773	False	NA	NA	False	NA	NA	NA	135031322	135031147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_135031100_135031300
m54284U_201014_093907/135530015/ccs	chr2	+	173	1	Intergenic	novelGene_809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTAAAATACAGATGA	NA	False	NA	NA	False	NA	NA	NA	60009075	60009248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_60009100_60009200
m54284U_201014_093907/135661852/ccs	chr7	-	180	1	Intergenic	novelGene_4054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGATATTTACTG	NA	False	NA	NA	False	NA	NA	NA	117948460	117948280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_117948300_117948500
m54284U_201014_093907/135857140/ccs	chr7	+	163	1	Intergenic	novelGene_4161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAAAATAAA	4102	False	NA	NA	False	NA	NA	NA	140708490	140708653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140708500_140708700
m54284U_201014_093907/135987792/ccs	chr9	-	2586	8	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	111	junction_3	12.0203908388358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	3843	False	NA	-4	True	NA	NA	NA	106076474	106072149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106075196_106075299_106075424_106076168
m54284U_201014_093907/136055381/ccs	chr2	+	175	1	Intergenic	novelGene_1204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGTTCACAG	6003	False	NA	NA	False	NA	NA	NA	163211658	163211833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_163211700_163211800
m54284U_201014_093907/136120232/ccs	chr7	+	3405	28	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	251	junction_1	33.2996537671954	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGGCGTT	9875	False	NA	36	True	AATATA	-18	NA	24603782	24626019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
m54284U_201014_093907/136251950/ccs	chr19	+	170	1	Intergenic	novelGene_9195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAGGCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	25450786	25450956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_25450800_25451000
m54284U_201014_093907/136906540/ccs	chr15	+	139	1	Intergenic	novelGene_7853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTGAAAAAAAAATGACA	1491	False	NA	NA	False	NA	NA	NA	81813007	81813146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81813000_81813100
m54284U_201014_093907/13698510/ccs	chr11	+	2263	12	NNC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-4475	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_3	2085.9475203972	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360543	55391189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_55360628_55376451_55376565_55378304_55378455_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
m54284U_201014_093907/137036204/ccs	chr8	+	198	1	Intergenic	novelGene_4519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTAACTTGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	112626449	112626647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112626400_112626600
m54284U_201014_093907/137036284/ccs	chr7	-	936	7	NNC	ENSMUSG00000030780.16	novel	464	3	NA	NA	0	3518	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	59.0124751406194	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATCTAGATACCCTTGG	1167	False	NA	NA	False	AATAAA	-18	NA	127897281	127883618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_127883833_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
m54284U_201014_093907/137037821/ccs	chr9	-	6674	1	Intergenic	novelGene_5000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	241	False	NA	NA	False	NA	NA	NA	92436291	92429617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_92429600_92436300
m54284U_201014_093907/137497089/ccs	chr7	-	2191	3	NNC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	168	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	92	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATTTTAGGATTCCAA	NA	False	NA	-45	True	NA	NA	NA	12743559	12739637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_12740308_12740950_12742257_12743344
m54284U_201014_093907/137625938/ccs	chr9	+	157	1	Intergenic	novelGene_4839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	61786716	61786873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_61786700_61786900
m54284U_201014_093907/137626207/ccs	chr16	+	161	1	Intergenic	novelGene_8168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAATTGAAAAAT	1839	False	NA	NA	False	NA	NA	NA	23159180	23159341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_23159200_23159300
m54284U_201014_093907/137692912/ccs	chrX	+	195	1	Intergenic	novelGene_9376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAACTAATTTGTCT	NA	False	NA	NA	False	NA	NA	NA	8107228	8107423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_8107200_8107400
m54284U_201014_093907/137758820/ccs	chr16	-	183	1	Intergenic	novelGene_8163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCAAAGTCTTTTCAAAA	8273	False	NA	NA	False	NA	NA	NA	22113044	22112861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_22112900_22113000
m54284U_201014_093907/137822336/ccs	chr9	+	167	1	Intergenic	novelGene_5073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTGAAAAAAAAGATTTAA	1673	False	NA	NA	False	NA	NA	NA	107589550	107589717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_107589600_107589700
m54284U_201014_093907/137890492/ccs	chr11	+	171	1	Intergenic	novelGene_6067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	78279100	78279271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_78279100_78279300
m54284U_201014_093907/137954470/ccs	chr5	+	181	1	Intergenic	novelGene_2463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	11162080	11162261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_11162100_11162300
m54284U_201014_093907/138348985/ccs	chr18	+	189	1	Intergenic	novelGene_9053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGGCCAGAGCATTGTG	NA	False	NA	NA	False	NA	NA	NA	82729792	82729981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_82729800_82730000
m54284U_201014_093907/138478253/ccs	chr2	+	1513	1	Intergenic	novelGene_1171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155948438	155949951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155948400_155950000
m54284U_201014_093907/138543178/ccs	chr11	+	176	1	Intergenic	novelGene_5894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAAAACCTTTTA	NA	False	NA	NA	False	NA	NA	NA	61085915	61086091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_61085900_61086100
m54284U_201014_093907/138609462/ccs	chr5	+	4131	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	239.009184961306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186421	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212433_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201014_093907/138611250/ccs	chr9	-	2612	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_16	440.210744984718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678929	36643721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36678845
m54284U_201014_093907/138807259/ccs	chr10	-	2338	9	NIC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	84	0	intron_retention	FALSE	canonical	3	99	junction_8	17.8605710994918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTAGTTCCTCAGCTC	NA	False	NA	-17	True	AATAAA	-18	NA	79820080	79812951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79813688_79813796_79814155_79814225_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
m54284U_201014_093907/139003307/ccs	chr3	+	2890	1	Antisense	novelGene_ENSMUSG00000061175.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79407743	79410633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_79407700_79410600
m54284U_201014_093907/139068734/ccs	chr5	+	188	1	Intergenic	novelGene_2662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGTGACTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	92222574	92222762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92222600_92222800
m54284U_201014_093907/139134174/ccs	chr5	+	176	1	Intergenic	novelGene_2550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTTAATGTATAG	1112	False	NA	NA	False	NA	NA	NA	34531761	34531937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_34531800_34531900
m54284U_201014_093907/139591857/ccs	chr9	-	2999	10	NNC	ENSMUSG00000061559.16	novel	1187	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_9	347.327717307267	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCATTTGTGAACGTGCT	5423	False	NA	-3	True	AATAAA	-19	NA	54641801	54624442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641761
m54284U_201014_093907/13961688/ccs	chr11	+	188	1	Intergenic	novelGene_6219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTCTAGAAGGTTGTC	NA	False	NA	NA	False	NA	NA	NA	94860787	94860975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94860800_94861000
m54284U_201014_093907/139724295/ccs	chr11	-	188	1	Intergenic	novelGene_5861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGGTGTGAACGGAGC	NA	False	NA	NA	False	NA	NA	NA	57809346	57809158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57809200_57809300
m54284U_201014_093907/139788302/ccs	chr11	+	191	1	Intergenic	novelGene_5950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACACTAAAAAATTCCACC	7775	False	NA	NA	False	NA	NA	NA	69641522	69641713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69641500_69641700
m54284U_201014_093907/139854242/ccs	chr16	+	3376	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	intron_retention	FALSE	canonical	3	2657	junction_7	160.064989989717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20326904_20327458_20327570_20327710
m54284U_201014_093907/139854889/ccs	chr16	-	311	1	Intergenic	novelGene_8151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	21191497	21191186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_21191200_21191500
m54284U_201014_093907/139920274/ccs	chr3	+	2913	1	Intergenic	novelGene_1357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACAGCCAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	19346635	19349548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_19346600_19349500
m54284U_201014_093907/139920937/ccs	chr8	+	163	1	Intergenic	novelGene_4389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTAAAAATATATTAAA	1088	False	NA	NA	False	NA	NA	NA	86210120	86210283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_86210100_86210300
m54284U_201014_093907/139985318/ccs	chr17	-	6870	31	NNC	ENSMUSG00000024393.15	novel	6888	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_17	135.894930818711	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAAAGTCATGGGTGG	NA	False	NA	-1	True	AATAAA	-21	NA	35383873	35368051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369879_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376869_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
m54284U_201014_093907/139987396/ccs	chr7	-	772	6	NNC	ENSMUSG00000003873.12	novel	867	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	1236.80921730071	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCCCTTGTCCGCCCA	9977	False	NA	-2	True	AATAAA	-22	NA	45116260	45111120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115663_45116165
m54284U_201014_093907/140182562/ccs	chr13	+	4540	1	Intergenic	novelGene_7057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACACTAAAA	NA	False	NA	NA	False	NA	NA	NA	49093571	49098111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_49093600_49098100
m54284U_201014_093907/140641986/ccs	chr19	+	1509	10	NIC	ENSMUSG00000080268.5	novel	1388	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	76.2029454082248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTGATGTGTGGCTG	2730	False	NA	8	True	AATAAA	-19	NA	5091381	5099945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_5091640_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
m54284U_201014_093907/140837784/ccs	chr11	+	186	1	Intergenic	novelGene_6226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAAGAAAATATTTTTA	NA	False	NA	NA	False	NA	NA	NA	95330721	95330907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95330700_95330900
m54284U_201014_093907/140838557/ccs	chr8	+	193	1	Intergenic	novelGene_4580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACTAATGAACTGGGTG	NA	False	NA	NA	False	NA	NA	NA	124035589	124035782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_124035600_124035800
m54284U_201014_093907/14090644/ccs	chr7	+	185	1	Intergenic	novelGene_3889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	73075487	73075672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_73075500_73075700
m54284U_201014_093907/14091696/ccs	chr3	+	191	1	Antisense	novelGene_ENSMUSG00000027984.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTCCCCGTGTCCCACA	NA	False	NA	NA	False	NA	NA	NA	131040850	131041041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_131040800_131041000
m54284U_201014_093907/140970596/ccs	chr9	+	1476	1	Antisense	novelGene_ENSMUSG00000063849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTTGGGGGATGAAGGG	NA	False	NA	NA	False	NA	NA	NA	57331944	57333420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_57331900_57333400
m54284U_201014_093907/141099104/ccs	chr16	+	2990	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_12	115.71780059697	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2230	False	NA	22	True	AATAAA	-22	NA	21828261	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859282_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
m54284U_201014_093907/141165183/ccs	chr7	+	190	1	Intergenic	novelGene_3883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATTTAAAAGACAAAGCA	NA	False	NA	NA	False	NA	NA	NA	67727939	67728129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_67727900_67728100
m54284U_201014_093907/141298041/ccs	chr11	+	198	1	Intergenic	novelGene_6220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGGAAAATTTAAAGAAAAG	264	False	NA	NA	False	NA	NA	NA	94946081	94946279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94946100_94946300
m54284U_201014_093907/141361262/ccs	chr11	-	177	1	Intergenic	novelGene_5815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGTAGACTT	3342	False	NA	NA	False	NA	NA	NA	51946762	51946585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_51946600_51946800
m54284U_201014_093907/141428035/ccs	chr16	-	174	1	Intergenic	novelGene_8094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAGTAAAAG	NA	False	NA	NA	False	NA	NA	NA	16898157	16897983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_16898000_16898200
m54284U_201014_093907/141429510/ccs	chr1	+	175	1	Intergenic	novelGene_297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAGAAAGAAATAACA	2460	False	NA	NA	False	NA	NA	NA	131152193	131152368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_131152200_131152400
m54284U_201014_093907/14157364/ccs	chr7	+	182	1	Intergenic	novelGene_3754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATTCCTGTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	28894151	28894333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28894200_28894300
m54284U_201014_093907/141819923/ccs	chr8	+	1162	1	ISM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	25282	0	15029	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATCATTTTGTATC	NA	False	NA	13	True	AATAAA	-24	NA	69358424	69359586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_69358400_69359600
m54284U_201014_093907/141821846/ccs	chr6	+	183	1	Intergenic	novelGene_3345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAACTTTGGGGTAGGGG	NA	False	NA	NA	False	NA	NA	NA	83829913	83830096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_83829900_83830100
m54284U_201014_093907/142346510/ccs	chr2	+	177	1	Intergenic	novelGene_1182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATGAGTCTATGG	NA	False	NA	NA	False	NA	NA	NA	156663411	156663588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_156663400_156663600
m54284U_201014_093907/142410535/ccs	chr13	+	2770	4	NNC	ENSMUSG00000113566.2	novel	478	4	NA	NA	-326186	1564	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	236.785885465235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTATGTGTTGTTGTAG	NA	False	NA	NA	False	AGTAAA	-14	NA	61919375	62261425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_61919514_62254561_62254689_62254881_62254943_62258981
m54284U_201014_093907/142608498/ccs	chr19	-	129	1	Intergenic	novelGene_9349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTACAGTGTAGTTATG	NA	False	NA	NA	False	NA	NA	NA	57419652	57419523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_57419500_57419700
m54284U_201014_093907/142672142/ccs	chr13	+	3555	1	Intergenic	novelGene_7274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	99042327	99045882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_99042300_99045900
m54284U_201014_093907/142672797/ccs	chr7	+	2890	9	NNC	ENSMUSG00000001918.18	novel	2807	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	676.027539657224	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515292	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16530084_16531426
m54284U_201014_093907/142739441/ccs	chr11	+	162	1	Intergenic	novelGene_5930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGGCCTATTTTT	NA	False	NA	NA	False	NA	NA	NA	68722631	68722793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68722600_68722800
m54284U_201014_093907/142803187/ccs	chr3	-	178	1	Intergenic	novelGene_1448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAAGTGACTATTTA	NA	False	NA	-25	True	NA	NA	NA	82649614	82649436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_82649400_82649600
m54284U_201014_093907/142868992/ccs	chr16	+	194	1	Intergenic	novelGene_8196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTAGACATGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	31811554	31811748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31811600_31811700
m54284U_201014_093907/14288393/ccs	chr13	-	191	1	Intergenic	novelGene_7123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	413	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTATCTGTTATTCTA	NA	False	NA	NA	False	NA	NA	NA	58415676	58415485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58415500_58415700
m54284U_201014_093907/143000556/ccs	chr2	-	203	1	Intergenic	novelGene_916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTATACTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	90617411	90617208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_90617200_90617400
m54284U_201014_093907/143065344/ccs	chr12	+	242	1	Antisense	novelGene_ENSMUSG00000097832.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTATTTTTCTTTCTTTTT	NA	False	NA	NA	False	AATAGA	-28	NA	110808479	110808721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_+_110808500_110808700
m54284U_201014_093907/143197927/ccs	chr19	-	182	1	Intergenic	novelGene_9110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCCACCATGCCC	NA	False	NA	NA	False	NA	NA	NA	5940177	5939995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5940000_5940200
m54284U_201014_093907/143394637/ccs	chr8	+	2103	13	NIC	ENSMUSG00000042870.16	novel	2267	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	88.9817006780358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTCTGGCGGAAGCAA	NA	False	NA	12	True	AATAAA	-25	NA	75760332	75796749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_75760456_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
m54284U_201014_093907/143460365/ccs	chr2	+	196	1	Intergenic	novelGene_772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTCCTCAGCATTAGGAA	NA	False	NA	NA	False	NA	NA	NA	37826884	37827080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_37826900_37827100
m54284U_201014_093907/143525169/ccs	chr4	-	196	1	Intergenic	novelGene_2026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCACTTCCCTAGTGG	NA	False	NA	NA	False	NA	NA	NA	116574456	116574260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116574300_116574500
m54284U_201014_093907/143525939/ccs	chr4	+	148	1	Intergenic	novelGene_1882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATTTAAAAAAAAAACACT	NA	False	NA	NA	False	NA	NA	NA	59138303	59138451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_59138300_59138500
m54284U_201014_093907/143591648/ccs	chr4	+	1250	4	NNC	ENSMUSG00000042198.13	novel	524	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	182.550449647944	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTGGGGTTTTTTTT	NA	False	NA	28	True	ATTAAA	-21	NA	3938887	3943526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_3939118_3939378_3939527_3941245_3941312_3942720
m54284U_201014_093907/143656964/ccs	chr15	+	186	1	Intergenic	novelGene_7836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTTCAAGATTTGAC	243	False	NA	NA	False	NA	NA	NA	81302040	81302226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81302000_81302200
m54284U_201014_093907/143919478/ccs	chr11	-	177	1	Intergenic	novelGene_6145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGATAAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85161291	85161114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_85161100_85161300
m54284U_201014_093907/144050354/ccs	chr7	+	193	1	Intergenic	novelGene_4053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCAAGGGTCAGCAAGAT	NA	False	NA	NA	False	NA	NA	NA	117839993	117840186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_117840000_117840200
m54284U_201014_093907/144247260/ccs	chr11	+	173	1	Intergenic	novelGene_5717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAAGCCCTTC	1539	False	NA	NA	False	NA	NA	NA	20114615	20114788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_20114600_20114800
m54284U_201014_093907/144312942/ccs	chr19	+	177	1	Intergenic	novelGene_9262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGCCAAAGCGGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	41785641	41785818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_41785600_41785800
m54284U_201014_093907/1443832/ccs	chr17	-	178	1	Intergenic	novelGene_8659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTATTTTCTAAA	4492	False	NA	NA	False	NA	NA	NA	56977648	56977470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_56977500_56977600
m54284U_201014_093907/144509565/ccs	chr5	+	182	1	Intergenic	novelGene_3090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTCAATAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	149610294	149610476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_149610300_149610500
m54284U_201014_093907/144574286/ccs	chr4	-	167	1	Intergenic	novelGene_2246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTCCCCATGCCTTG	NA	False	NA	NA	False	NA	NA	NA	135247011	135246844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135246800_135247000
m54284U_201014_093907/144704470/ccs	chr7	+	198	1	Intergenic	novelGene_4045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTCCTGCTGTCGGGGG	NA	False	NA	NA	False	NA	NA	NA	116171815	116172013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_116171800_116172000
m54284U_201014_093907/144835603/ccs	chr2	+	208	1	Intergenic	novelGene_943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACACCCTGGGCTGGAGA	4563	False	NA	NA	False	NA	NA	NA	91968437	91968645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91968400_91968600
m54284U_201014_093907/14484131/ccs	chr13	+	135	1	Intergenic	novelGene_6958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAGAAAGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	9104410	9104545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_9104400_9104500
m54284U_201014_093907/14484484/ccs	chr3	-	258	1	Intergenic	novelGene_1445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTTTTCATGAAATGAAT	6355	False	NA	NA	False	NA	NA	NA	79515027	79514769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_79514800_79515000
m54284U_201014_093907/144901696/ccs	chr17	+	191	1	Intergenic	novelGene_8695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTCTGTTGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	69671920	69672111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_69671900_69672100
m54284U_201014_093907/145033445/ccs	chr6	-	172	1	Intergenic	novelGene_3573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATAAGATTCACAT	NA	False	NA	NA	False	NA	NA	NA	145063224	145063052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_145063100_145063200
m54284U_201014_093907/145033634/ccs	chr5	+	199	1	Intergenic	novelGene_3060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGGACTAAACCTTGTA	3562	False	NA	NA	False	NA	NA	NA	144682772	144682971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_144682800_144683000
m54284U_201014_093907/145096863/ccs	chr9	+	192	1	Intergenic	novelGene_4701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTCTTAGTAATGAAAGC	NA	False	NA	NA	False	NA	NA	NA	32862785	32862977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_32862800_32863000
m54284U_201014_093907/145097982/ccs	chr5	+	179	1	Intergenic	novelGene_2858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	8909	False	NA	NA	False	NA	NA	NA	121761966	121762145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_121762000_121762100
m54284U_201014_093907/145098547/ccs	chr19	+	2225	17	NIC	ENSMUSG00000032946.17	novel	919	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	85.6383885518054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATCAGCCTAAAACCCT	NA	False	NA	20	True	AATAAA	-22	NA	6449893	6465241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6449995_6451745_6451894_6452501_6452605_6453053_6453117_6453461_6453594_6454329_6454481_6454683_6454858_6454967_6455085_6457070_6457353_6458200_6458279_6458477_6458601_6458868_6458985_6463114_6463257_6463457_6463495_6463894_6464072_6464821_6464885_6465023
m54284U_201014_093907/145163209/ccs	chr7	+	204	1	Intergenic	novelGene_3680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCTTCCTCAGCTGAT	NA	False	NA	NA	False	NA	NA	NA	18805914	18806118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_18805900_18806100
m54284U_201014_093907/145228677/ccs	chr11	+	178	1	Intergenic	novelGene_6402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	106988434	106988612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106988400_106988600
m54284U_201014_093907/145425777/ccs	chr7	-	176	1	Intergenic	novelGene_3689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	19440189	19440013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_19440000_19440200
m54284U_201014_093907/145689007/ccs	chr2	+	178	1	Intergenic	novelGene_1165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTGGTTTG	NA	False	NA	NA	False	NA	NA	NA	155766901	155767079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155766900_155767100
m54284U_201014_093907/145951572/ccs	chr19	+	196	1	Intergenic	novelGene_9109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATTATAT	NA	False	NA	NA	False	NA	NA	NA	5904104	5904300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_5904100_5904300
m54284U_201014_093907/146276722/ccs	chr11	-	163	1	Intergenic	novelGene_5722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGAGCCAGGTGTGGTC	2469	False	NA	NA	False	NA	NA	NA	20540432	20540269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_20540300_20540400
m54284U_201014_093907/146277494/ccs	chr4	+	185	1	Intergenic	novelGene_2054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCATGACCCAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	118057568	118057753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_118057600_118057800
m54284U_201014_093907/146342079/ccs	chr3	+	1044	7	NNC	ENSMUSG00000005687.15	novel	1467	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	1390.84739357782	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5023	False	NA	48	True	AATAAA	-16	NA	103079064	103086143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_103079182_103079263_103079357_103080594_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
m54284U_201014_093907/146342273/ccs	chr3	-	185	1	Intergenic	novelGene_1589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTCTTAGGATGACACT	NA	False	NA	NA	False	NA	NA	NA	97878231	97878046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_97878000_97878200
m54284U_201014_093907/146343499/ccs	chr6	+	196	1	Antisense	novelGene_ENSMUSG00000107915.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAAGCCAGCAAGCAA	NA	False	NA	NA	False	NA	NA	NA	121174343	121174539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_+_121174300_121174500
m54284U_201014_093907/146538596/ccs	chr11	-	441	1	Intergenic	novelGene_5684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATAGTGGGGTAATGAA	2774	False	NA	NA	False	NA	NA	NA	5738387	5737946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_5737900_5738400
m54284U_201014_093907/146540377/ccs	chr1	-	1331	1	Antisense	novelGene_ENSMUSG00000025949.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAATGAAATTCCGTTC	NA	False	NA	NA	False	NA	NA	NA	65232149	65230818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_65230800_65232100
m54284U_201014_093907/146671455/ccs	chr19	+	203	1	Intergenic	novelGene_9327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGCAGCTTATAGCTGT	NA	False	NA	NA	False	NA	NA	NA	47053470	47053673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_47053500_47053700
m54284U_201014_093907/14680200/ccs	chr11	-	2085	6	NIC	ENSMUSG00000062825.16	novel	1189	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_3	2624.0529415391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239315	120236516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120237360_120237462_120237645_120237736_120238363_120238461_120238702_120238794_120238924_120239250
m54284U_201014_093907/146802045/ccs	chr19	-	1281	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	79.8254932649965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	9953	False	NA	-1	True	AATAAA	-14	NA	6117880	6112851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117698
m54284U_201014_093907/14680416/ccs	chr8	+	159	1	Intergenic	novelGene_4388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAAATAAAAA	NA	False	NA	-19	True	NA	NA	NA	86198382	86198541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_86198400_86198500
m54284U_201014_093907/14682015/ccs	chr4	+	175	1	Intergenic	novelGene_2072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAACAATGTAAA	NA	False	NA	NA	False	NA	NA	NA	120419740	120419915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_120419700_120419900
m54284U_201014_093907/147259865/ccs	chr17	-	174	1	Intergenic	novelGene_8364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGACCAGAGCAGGGGTT	NA	False	NA	NA	False	NA	NA	NA	9036428	9036254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_9036300_9036400
m54284U_201014_093907/147325764/ccs	chr16	+	2513	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_9	730.113860222424	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317623	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324107_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
m54284U_201014_093907/14746271/ccs	chr2	+	158	1	ISM	ENSMUSG00000039069.20	ENSMUST00000142608.8	2339	5	9640	218	1609	-218	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAAATAATTT	NA	False	NA	NA	False	NA	NA	NA	179722024	179722182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_179722000_179722200
m54284U_201014_093907/147524211/ccs	chr1	+	174	1	Intergenic	novelGene_100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAGTAATCT	5335	False	NA	NA	False	NA	NA	NA	39498686	39498860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_39498700_39498900
m54284U_201014_093907/147589722/ccs	chr8	+	139	1	Intergenic	novelGene_4605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGTCAGACTCTGAA	135	False	NA	NA	False	NA	NA	NA	125995575	125995714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_125995600_125995700
m54284U_201014_093907/147849258/ccs	chr2	+	176	1	Intergenic	novelGene_1232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	165821816	165821992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_165821800_165822000
m54284U_201014_093907/147981655/ccs	chr1	+	4235	6	NNC	ENSMUSG00000051285.18	novel	5232	6	NA	NA	81	79	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_2	49.9623858517585	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTATCCAGTGGCCTGC	NA	False	NA	NA	False	AATAAA	-19	NA	7159234	7242962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_7159441_7190417_7190824_7217860_7217964_7231115_7231288_7233471_7233596_7239738
m54284U_201014_093907/148177193/ccs	chr16	+	202	1	Intergenic	novelGene_8149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTATATTTTCCAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	20982590	20982792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_20982600_20982800
m54284U_201014_093907/148178015/ccs	chr10	-	177	1	Intergenic	novelGene_5320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTGAAAGAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	60362930	60362753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_60362800_60362900
m54284U_201014_093907/148505662/ccs	chr3	+	172	1	Intergenic	novelGene_1566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTTCTTTGAGACA	NA	False	NA	NA	False	NA	NA	NA	95182010	95182182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95182000_95182200
m54284U_201014_093907/148572645/ccs	chr13	+	174	1	Intergenic	novelGene_7267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAGTTGAAA	NA	False	NA	NA	False	NA	NA	NA	97433095	97433269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97433100_97433300
m54284U_201014_093907/148834032/ccs	chr3	+	4855	1	Antisense	novelGene_ENSMUSG00000068739.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATCAAACAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	108342175	108347030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_108342200_108347000
m54284U_201014_093907/149031277/ccs	chr9	+	183	1	Intergenic	novelGene_4907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAGTAGGAATTCATTG	NA	False	NA	NA	False	NA	NA	NA	68106268	68106451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_68106300_68106500
m54284U_201014_093907/149162160/ccs	chrX	-	2494	12	NNC	ENSMUSG00000031299.11	novel	2848	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	45	junction_1	402.795766800082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTTGAGTTCCCTTTC	NA	False	NA	-1	True	ATTAAA	-24	NA	158921352	158905204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_158906527_158906823_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
m54284U_201014_093907/149226243/ccs	chr10	+	317	1	Intergenic	novelGene_5448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACGTGCCAAGCCTCAAA	1317	False	NA	NA	False	NA	NA	NA	80160076	80160393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80160100_80160400
m54284U_201014_093907/149226597/ccs	chr2	-	1657	5	NNC	ENSMUSG00000027341.11	novel	1612	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	289.704483051264	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	4908	False	NA	-4	True	TATAAA	-18	NA	132089689	132081413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_132082547_132085938_132086062_132087207_132087293_132087875_132087995_132089492
m54284U_201014_093907/149555084/ccs	chr8	-	177	1	Intergenic	novelGene_4375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGTGGTGGTGGCACAC	NA	False	NA	NA	False	NA	NA	NA	85585935	85585758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_85585800_85585900
m54284U_201014_093907/149619185/ccs	chr8	+	2319	1	NIC	ENSMUSG00000055148.8	novel	1847	3	NA	NA	0	-305	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGTAGTGGTGTGGCTG	NA	False	NA	34	True	ATTAAA	-21	NA	73072876	73075195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_73072900_73075200
m54284U_201014_093907/149881480/ccs	chr17	-	181	1	Intergenic	novelGene_8623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGTGGGGGAGGCTG	NA	False	NA	NA	False	NA	NA	NA	47163558	47163377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_47163400_47163600
m54284U_201014_093907/149947068/ccs	chr5	+	196	1	Intergenic	novelGene_2461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAAGGTTAATGGAA	NA	False	NA	NA	False	NA	NA	NA	9917142	9917338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_9917100_9917300
m54284U_201014_093907/149947383/ccs	chr2	-	1842	1	FSM	ENSMUSG00000074807.4	ENSMUST00000238197.2	2540	1	0	698	0	390	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATTTGAGTATTGCTG	9123	False	NA	NA	False	AATAAA	-20	NA	128809964	128808122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_128808100_128810000
m54284U_201014_093907/150013187/ccs	chr14	+	155	1	Intergenic	novelGene_7436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTCCCTTTTCAATTT	NA	False	NA	NA	False	NA	NA	NA	51238708	51238863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_51238700_51238900
m54284U_201014_093907/150208583/ccs	chr4	+	189	1	Intergenic	novelGene_2060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCCTTCATATGGA	4170	False	NA	NA	False	NA	NA	NA	119124606	119124795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_119124600_119124800
m54284U_201014_093907/150342066/ccs	chr2	+	190	1	Intergenic	novelGene_575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGGCAGAGTTTAGGC	NA	False	NA	NA	False	NA	NA	NA	5673594	5673784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_5673600_5673800
m54284U_201014_093907/150407597/ccs	chr5	-	1704	7	NNC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_2	63.6310982670162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCTGCCTAGATTCT	NA	False	NA	-12	True	ATTAAA	-14	NA	33786943	33757699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_33758225_33764807_33765034_33765293_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
m54284U_201014_093907/150407766/ccs	chr11	-	179	1	Intergenic	novelGene_6040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTTGGCTCAAAGTT	NA	False	NA	-9	True	NA	NA	NA	76813415	76813236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_76813200_76813400
m54284U_201014_093907/150471303/ccs	chr13	+	162	1	Intergenic	novelGene_7321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTCTAGCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117314146	117314308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_117314100_117314300
m54284U_201014_093907/150471362/ccs	chr6	-	376	2	NNC	ENSMUSG00000107479.2	novel	479	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGAGTTGCTGTGGCCAT	NA	False	NA	NA	False	NA	NA	NA	66442683	66431177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_66431365_66442494
m54284U_201014_093907/150473551/ccs	chr7	-	779	4	NNC	ENSMUSG00000045948.9	novel	722	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_2	228.231364092571	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGTGCGGTGTCTGTC	1644	False	NA	-5	True	AATAAA	-24	NA	28441245	28439065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_28439665_28440139_28440196_28440911_28440980_28441189
m54284U_201014_093907/150603807/ccs	chr9	+	203	1	Intergenic	novelGene_4702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATTAACCAACCAGCG	NA	False	NA	NA	False	NA	NA	NA	35239517	35239720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_35239500_35239700
m54284U_201014_093907/15073672/ccs	chr12	+	163	1	Intergenic	novelGene_6728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	76215039	76215202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_76215000_76215200
m54284U_201014_093907/1508141/ccs	chr13	+	185	1	Intergenic	novelGene_6983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTATTTGGGGTAGTG	NA	False	NA	NA	False	NA	NA	NA	20217549	20217734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_20217500_20217700
m54284U_201014_093907/150864860/ccs	chr19	+	160	1	Intergenic	novelGene_9111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGAGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	5945160	5945320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_5945200_5945300
m54284U_201014_093907/151126832/ccs	chr10	-	3463	1	NIC	ENSMUSG00000075266.6	novel	1532	3	NA	NA	0	-1089	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAATGGCTTCTGAGT	NA	False	NA	-7	True	ATTAAA	-22	NA	30076556	30073093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_30073100_30076600
m54284U_201014_093907/151388951/ccs	chr1	+	182	1	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAATTAGTC	NA	False	NA	NA	False	NA	NA	NA	23895716	23895898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_23895700_23895900
m54284U_201014_093907/151389185/ccs	chr5	-	179	1	Intergenic	novelGene_3022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAAATTGAAGATGTTT	NA	False	NA	NA	False	NA	NA	NA	140439547	140439368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_140439400_140439500
m54284U_201014_093907/15139044/ccs	chr11	-	182	1	Intergenic	novelGene_6100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGTTTTTTG	2195	False	NA	NA	False	NA	NA	NA	79960224	79960042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79960000_79960200
m54284U_201014_093907/151586475/ccs	chr11	+	120	1	Intergenic	novelGene_5938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68932650	68932770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68932600_68932800
m54284U_201014_093907/151651765/ccs	chr11	-	189	1	Intergenic	novelGene_5998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGACCCCTGTGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	74984603	74984414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_74984400_74984600
m54284U_201014_093907/151651821/ccs	chr1	-	191	1	Intergenic	novelGene_180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGGGGTTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	72885268	72885077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_72885100_72885300
m54284U_201014_093907/151848289/ccs	chr9	+	205	1	Intergenic	novelGene_4999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAGATACAAGGTG	NA	False	NA	NA	False	NA	NA	NA	91221735	91221940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_91221700_91221900
m54284U_201014_093907/151912493/ccs	chr17	-	1125	2	NNC	ENSMUSG00000050138.9	novel	1972	2	NA	NA	50978	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTTTTCTAAAGAAAT	3768	False	NA	NA	False	AATAAA	-31	NA	88054444	88053228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_88054270_88054360
m54284U_201014_093907/151978332/ccs	chr11	-	175	1	Intergenic	novelGene_6102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTTTAAAAG	NA	False	NA	NA	False	NA	NA	NA	80020346	80020171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80020200_80020300
m54284U_201014_093907/15205469/ccs	chr13	+	2038	6	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	379	junction_1	15.1340675299141	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54937275	54944588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54943272_54943778_54943896_54943969
m54284U_201014_093907/152109423/ccs	chr6	-	200	1	Intergenic	novelGene_3561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGACTTTCGTTTTTTG	5955	False	NA	NA	False	NA	NA	NA	137643297	137643097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_137643100_137643300
m54284U_201014_093907/152110299/ccs	chr2	+	218	1	Intergenic	novelGene_718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGAGATAGGGT	NA	False	NA	NA	False	TATAAA	-10	NA	32356876	32357094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_32356900_32357100
m54284U_201014_093907/152241012/ccs	chr10	+	2500	14	NNC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	143.536317899732	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATAGTCATTGCACA	8464	False	NA	19	True	TATAAA	-17	NA	80062513	80079737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80062645_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
m54284U_201014_093907/152372739/ccs	chr9	+	3458	16	NNC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	0	intron_retention	FALSE	canonical	2	29	junction_9	91.3560555677011	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125505	99182457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160215_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99180636_99181780
m54284U_201014_093907/152438375/ccs	chr13	+	187	1	Intergenic	novelGene_7176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGGAAAAATCTTAAATGTA	NA	False	NA	NA	False	NA	NA	NA	65669500	65669687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_65669500_65669700
m54284U_201014_093907/152503174/ccs	chr5	+	196	1	Intergenic	novelGene_2890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATGAAACAAACCAAAA	6166	False	NA	NA	False	NA	NA	NA	123815807	123816003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123815800_123816000
m54284U_201014_093907/152504589/ccs	chr1	+	186	1	Intergenic	novelGene_487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTACAGAGACAAAGTGT	972	False	NA	NA	False	NA	NA	NA	172436277	172436463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_172436300_172436500
m54284U_201014_093907/152570628/ccs	chr7	+	7295	26	NNC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	101.494165349541	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTAAGCTCTTTGG	2093	False	NA	28	True	AATAAA	-16	NA	101583317	101664162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_101583525_101584067_101584134_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
m54284U_201014_093907/152963205/ccs	chr1	+	172	1	Intergenic	novelGene_510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	180466221	180466393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_180466200_180466400
m54284U_201014_093907/153027150/ccs	chr4	+	162	1	Intergenic	novelGene_1811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGTACAATTGTT	NA	False	NA	NA	False	NA	NA	NA	40911533	40911695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_40911500_40911700
m54284U_201014_093907/153027489/ccs	chr16	-	226	1	Intergenic	novelGene_8156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTAAAAAAAGGGTACT	NA	False	NA	NA	False	AAGAAA	-12	NA	21811055	21810829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_21810800_21811100
m54284U_201014_093907/153159303/ccs	chr1	+	185	1	Intergenic	novelGene_488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGAATTAGATTACCATA	NA	False	NA	NA	False	NA	NA	NA	174234929	174235114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_174234900_174235100
m54284U_201014_093907/153159438/ccs	chr17	-	184	1	Intergenic	novelGene_8708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATATACAAATAAG	NA	False	NA	NA	False	NA	NA	NA	71213424	71213240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71213200_71213400
m54284U_201014_093907/153224938/ccs	chr17	-	2249	14	NIC	ENSMUSG00000004865.17	novel	4804	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_6	201.015351646667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841461	28808563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
m54284U_201014_093907/153356580/ccs	chr1	+	165	1	Intergenic	novelGene_155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAATATTAATTTAG	NA	False	NA	NA	False	NA	NA	NA	60536889	60537054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_60536900_60537100
m54284U_201014_093907/153421169/ccs	chr12	+	3823	1	NIC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	0	-36028	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAATGCTAAGTGCCTAGG	NA	False	NA	NA	False	NA	NA	NA	86516890	86520713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_86516900_86520700
m54284U_201014_093907/153617295/ccs	chr6	-	186	1	Intergenic	novelGene_3333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAAACACCTGGATCCA	NA	False	NA	-34	True	NA	NA	NA	72888011	72887825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_72887800_72888000
m54284U_201014_093907/15401749/ccs	chr5	-	186	1	Intergenic	novelGene_2564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATAAATAATAAT	NA	False	NA	NA	False	NA	NA	NA	37947214	37947028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_37947000_37947200
m54284U_201014_093907/15402069/ccs	chr13	+	5234	1	Intergenic	novelGene_7291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTTGACCTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	107047943	107053177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_107047900_107053200
m54284U_201014_093907/154207770/ccs	chr9	+	185	1	Intergenic	novelGene_4947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATATCAAGGGCAGCATA	NA	False	NA	NA	False	NA	NA	NA	74069136	74069321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_74069100_74069300
m54284U_201014_093907/154274452/ccs	chr10	+	177	1	Intergenic	novelGene_5455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAAGAGTT	NA	False	NA	NA	False	NA	NA	NA	80825913	80826090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80825900_80826100
m54284U_201014_093907/154338508/ccs	chr4	+	510	1	FSM	ENSMUSG00000043770.11	ENSMUST00000102482.5	297	1	-123	-90	-123	90	mono-exon	FALSE	NA	NA	NA	NA	NA	613	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGAGATGAAGGGGAGA	8381	False	NA	NA	False	ATTAAA	-33	NA	43663919	43664429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_43663900_43664400
m54284U_201014_093907/154338792/ccs	chr5	+	176	1	Intergenic	novelGene_3051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGTATGATACCAT	NA	False	NA	NA	False	NA	NA	NA	143954169	143954345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_143954200_143954300
m54284U_201014_093907/154404277/ccs	chr12	+	190	1	Intergenic	novelGene_6544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTATAATGGGTCTCTTT	NA	False	NA	NA	False	NA	NA	NA	4455928	4456118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_4455900_4456100
m54284U_201014_093907/154470700/ccs	chr4	+	168	1	Intergenic	novelGene_2128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCTTAGCCATTCT	NA	False	NA	NA	False	NA	NA	NA	126959863	126960031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126959900_126960000
m54284U_201014_093907/15467145/ccs	chr9	-	4666	6	NIC	ENSMUSG00000025786.18	novel	5376	7	NA	NA	0	-642	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	132.023331271408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8714	False	NA	NA	False	AATAAA	-13	NA	122942269	122895866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122929327_122929658_122942060
m54284U_201014_093907/15467487/ccs	chr16	-	176	1	Intergenic	novelGene_8245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTTTTATACATTACA	NA	False	NA	-9	True	NA	NA	NA	35819392	35819216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_35819200_35819400
m54284U_201014_093907/154732488/ccs	chr7	+	170	1	Intergenic	novelGene_3650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATGTATCTAAT	6426	False	NA	NA	False	NA	NA	NA	12610153	12610323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_12610200_12610300
m54284U_201014_093907/154732832/ccs	chr15	-	1630	9	NNC	ENSMUSG00000022404.9	novel	1724	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	109.401496790492	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAAGTTGCTCTTGATT	6861	False	NA	-10	True	AATAAA	-27	NA	81245000	81203111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222208_81224174_81224242_81228301_81228363_81244877
m54284U_201014_093907/154798328/ccs	chr6	+	186	1	Intergenic	novelGene_3584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATAAAATCT	NA	False	NA	NA	False	NA	NA	NA	148830833	148831019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_148830800_148831000
m54284U_201014_093907/155125014/ccs	chr4	-	158	1	Intergenic	novelGene_1739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	-54	True	NA	NA	NA	11046162	11046004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11046000_11046200
m54284U_201014_093907/155255849/ccs	chr10	+	168	1	Intergenic	novelGene_5587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGTTAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	121430264	121430432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_121430300_121430400
m54284U_201014_093907/155517063/ccs	chr18	+	286	1	FSM	ENSMUSG00000058625.7	ENSMUST00000078739.7	1355	1	1233	-164	1233	164	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGCAACATT	NA	False	NA	NA	False	AGTAAA	-26	NA	82357819	82358105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_82357800_82358100
m54284U_201014_093907/155648660/ccs	chr1	+	3501	1	Intergenic	novelGene_326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	4164	False	NA	NA	False	NA	NA	NA	134329711	134333212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_134329700_134333200
m54284U_201014_093907/155975713/ccs	chr8	+	183	1	Intergenic	novelGene_4421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGGGAGGTTGGAGA	NA	False	NA	NA	False	NA	NA	NA	96523695	96523878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_96523700_96523900
m54284U_201014_093907/155977486/ccs	chr9	+	180	1	Intergenic	novelGene_4963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	78007935	78008115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_78007900_78008100
m54284U_201014_093907/15599072/ccs	chr5	-	180	1	Intergenic	novelGene_2473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTATCTTAAAAAAAAAAAAA	2687	False	NA	NA	False	NA	NA	NA	21053325	21053145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_21053100_21053300
m54284U_201014_093907/156041718/ccs	chr11	-	2462	5	NIC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	101.88964618645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCGTGTGTCCTGTGT	5007	False	NA	-4	True	AATAAA	-14	NA	63970292	63853452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63970161
m54284U_201014_093907/156042256/ccs	chr9	-	2121	10	NIC	ENSMUSG00000039048.16	novel	2240	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	66.2654594122089	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122297	35115503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35121240_35121462_35122102
m54284U_201014_093907/156108130/ccs	chr8	+	176	1	Intergenic	novelGene_4236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGAAGGACATTTTT	296	False	NA	NA	False	NA	NA	NA	25808952	25809128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_25809000_25809100
m54284U_201014_093907/156109156/ccs	chr11	+	183	1	Intergenic	novelGene_5698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAATCTGCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	8540204	8540387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_8540200_8540400
m54284U_201014_093907/156173766/ccs	chr15	+	151	1	Intergenic	novelGene_7961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	99248474	99248625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99248500_99248600
m54284U_201014_093907/156369333/ccs	chr15	+	174	1	Intergenic	novelGene_7925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAACTAAGGTATTAA	NA	False	NA	NA	False	NA	NA	NA	96681398	96681572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_96681400_96681600
m54284U_201014_093907/156371096/ccs	chr5	-	6358	15	NIC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	53.2140939593861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	142803417	142740543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
m54284U_201014_093907/15665048/ccs	chr16	-	169	1	Intergenic	novelGene_8195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAATTCAATTC	NA	False	NA	NA	False	NA	NA	NA	31762711	31762542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31762500_31762700
m54284U_201014_093907/15666000/ccs	chr11	-	1021	5	NIC	ENSMUSG00000018446.9	novel	1175	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	2231.85326578608	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAAGTTGAGGTTCTTT	NA	False	NA	-38	True	AATAAA	-20	NA	70873833	70868673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70869071_70869514_70869611_70870835_70870930_70872995_70873147_70873550
m54284U_201014_093907/156698478/ccs	chr13	+	187	1	Intergenic	novelGene_6985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGTGTTCATGAAA	1278	False	NA	NA	False	NA	NA	NA	20994650	20994837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_20994600_20994800
m54284U_201014_093907/157222258/ccs	chr3	+	170	1	Intergenic	novelGene_1414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAGAAATTTAACTT	9868	False	NA	NA	False	NA	NA	NA	57745960	57746130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_57746000_57746100
m54284U_201014_093907/157223004/ccs	chr18	+	2445	4	NIC	ENSMUSG00000033272.13	novel	2362	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	190.025144535021	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGTCCTGTCTTCTGT	NA	False	NA	19	True	AATAAA	-37	NA	36812644	36816914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_36812677_36813480_36813668_36814580_36814819_36814926
m54284U_201014_093907/15728918/ccs	chr8	+	987	4	NIC	ENSMUSG00000031818.13	novel	745	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	8115	junction_1	513.621347773716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395046	121400946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_121395095_121396047_121396122_121399463_121400092_121400709
m54284U_201014_093907/15731514/ccs	chr5	+	2755	14	NIC	ENSMUSG00000079109.12	novel	5482	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	28.7468032696655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCATGTCTGCAGTTAC	NA	False	NA	NA	False	AAAAAG	-17	NA	143846842	143868260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_143846898_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
m54284U_201014_093907/157352550/ccs	chr19	+	177	1	Intergenic	novelGene_9225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATATCTTGGGG	NA	False	NA	NA	False	NA	NA	NA	34760497	34760674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_34760500_34760700
m54284U_201014_093907/157352781/ccs	chr16	+	4866	1	Genic_Genomic	ENSMUSG00000086237.2	novel	NA	NA	NA	NA	-4617	-567	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAGACCAAGCAATAGGG	NA	False	NA	NA	False	NA	NA	NA	45552248	45557114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_+_45552200_45557100
m54284U_201014_093907/1573764/ccs	chr8	+	1089	7	NNC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	384.182862999148	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026551	86034700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_86026622_86027737_86027868_86029490_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
m54284U_201014_093907/157550827/ccs	chr2	+	157	2	Intergenic	novelGene_601	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	17823751	17850646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_17823801_17850538
m54284U_201014_093907/157876393/ccs	chr1	-	176	1	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTTTCACTGGGAAGG	NA	False	NA	-1	True	NA	NA	NA	4835415	4835239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_4835200_4835400
m54284U_201014_093907/157877154/ccs	chr8	+	188	1	Intergenic	novelGene_4499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGCAAGATAGACAAC	NA	False	NA	NA	False	NA	NA	NA	111967599	111967787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111967600_111967800
m54284U_201014_093907/157942678/ccs	chr5	+	177	1	Intergenic	novelGene_2726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAATAT	NA	False	NA	NA	False	NA	NA	NA	107043601	107043778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_107043600_107043800
m54284U_201014_093907/157943377/ccs	chr6	+	2584	9	NIC	ENSMUSG00000030232.19	novel	5932	8	NA	NA	160	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	104.343108900396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	140568548	140598552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
m54284U_201014_093907/15794519/ccs	chr5	+	653	1	Intergenic	novelGene_2606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCATCTTTACCTTTGC	NA	False	NA	NA	False	NA	NA	NA	67911705	67912358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_67911700_67912400
m54284U_201014_093907/158204184/ccs	chr7	+	179	1	Intergenic	novelGene_3874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATGAATCAACC	NA	False	NA	NA	False	NA	NA	NA	63592112	63592291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_63592100_63592300
m54284U_201014_093907/158206681/ccs	chr8	-	4892	7	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	-8863	-738	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	93.2255329831908	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTGATCCTGCTGGAAA	NA	False	NA	-7	True	AATAAA	-18	NA	89779653	89754600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89774349_89774422_89775330_89775532_89776215_89776356_89779568
m54284U_201014_093907/158271497/ccs	chr1	+	174	1	Intergenic	novelGene_430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAACCAAAACCAAAAGC	NA	False	NA	NA	False	NA	NA	NA	160848423	160848597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_160848400_160848600
m54284U_201014_093907/158401588/ccs	chr16	+	2138	1	Intergenic	novelGene_8310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCAGGCCTGCAGG	NA	False	NA	NA	False	NA	NA	NA	89847137	89849275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_89847100_89849300
m54284U_201014_093907/15860016/ccs	chr7	-	177	1	Intergenic	novelGene_3623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTCAACTCTACATG	8750	False	NA	NA	False	NA	NA	NA	3711632	3711455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3711500_3711600
m54284U_201014_093907/158665459/ccs	chr19	-	1956	14	NIC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	0	65	intron_retention	FALSE	canonical	2	2	junction_12	26.8797453495968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCACGGACCTCAGTGCT	2749	False	NA	66	True	NA	NA	NA	4213353	4206725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212718_4212820_4212862_4213166
m54284U_201014_093907/158730502/ccs	chr18	+	188	1	Intergenic	novelGene_8988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACATCACTAGACCAT	2011	False	NA	NA	False	NA	NA	NA	65590130	65590318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_65590100_65590300
m54284U_201014_093907/158859944/ccs	chr11	+	189	1	Intergenic	novelGene_6217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAATAAAGAAAGAAA	7523	False	NA	NA	False	NA	NA	NA	94749653	94749842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94749700_94749800
m54284U_201014_093907/158860757/ccs	chr13	+	4719	1	Genic_Genomic	ENSMUSG00000021763.18	novel	NA	NA	NA	NA	16488	2294	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCTATTCATTCTTTG	NA	False	NA	14	True	ATTAAA	-26	NA	113504624	113509343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_+_113504600_113509300
m54284U_201014_093907/158993139/ccs	chr3	-	188	1	Intergenic	novelGene_1431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTTTTTCGTGATCTA	NA	False	NA	NA	False	NA	NA	NA	69556971	69556783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_69556800_69557000
m54284U_201014_093907/159122384/ccs	chr3	+	190	1	Intergenic	novelGene_1370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATAACACTTTGACCTG	NA	False	NA	NA	False	NA	NA	NA	31088784	31088974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_31088800_31089000
m54284U_201014_093907/159123905/ccs	chr12	-	2228	5	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_3	377.932864408482	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111637479_111637648_111638014_111638199_111638408_111638663
m54284U_201014_093907/159124281/ccs	chr9	+	418	1	Intergenic	novelGene_5028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCCTTCTTTCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	99052660	99053078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_99052700_99053100
m54284U_201014_093907/159253209/ccs	chr17	+	959	1	Intergenic	novelGene_8747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCAACATGTTCCAAATCA	NA	False	NA	NA	False	NA	NA	NA	80781734	80782693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_80781700_80782700
m54284U_201014_093907/159253382/ccs	chr11	+	194	1	Intergenic	novelGene_5915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTATTTGAGAGGATT	NA	False	NA	NA	False	NA	NA	NA	66412190	66412384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_66412200_66412400
m54284U_201014_093907/159580569/ccs	chr5	+	222	1	Intergenic	novelGene_2930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTGGGGACCAATGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	128032225	128032447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_128032200_128032400
m54284U_201014_093907/159712405/ccs	chr1	-	180	1	Intergenic	novelGene_323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATACTCTA	NA	False	NA	NA	False	NA	NA	NA	133496719	133496539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_133496500_133496700
m54284U_201014_093907/159713500/ccs	chr11	+	213	1	Intergenic	novelGene_6049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGGTGACAGATTATGA	NA	False	NA	NA	False	NA	NA	NA	77543238	77543451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77543200_77543500
m54284U_201014_093907/159778661/ccs	chr5	+	176	1	Intergenic	novelGene_2789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATTAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	114754023	114754199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_114754000_114754200
m54284U_201014_093907/160040767/ccs	chr1	+	1820	7	NIC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	0	-1013	combination_of_known_splicesites	FALSE	canonical	3	56	junction_6	364.344807687565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343208	134360073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134359267
m54284U_201014_093907/160106892/ccs	chr12	+	873	6	NIC	ENSMUSG00000062054.8	novel	1141	6	NA	NA	0	-211	combination_of_known_splicesites	FALSE	canonical	3	85	junction_2	143.346293987672	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCATGATTATTGAT	NA	False	NA	10	True	ATTAAA	-20	NA	21366414	21373609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_21366514_21367376_21367430_21367930_21368048_21369770_21369933_21371334_21371457_21373289
m54284U_201014_093907/160630672/ccs	chr5	+	3674	1	Intergenic	novelGene_2504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAGAATACCCAAGATAC	8021	False	NA	NA	False	NA	NA	NA	29442728	29446402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_29442700_29446400
m54284U_201014_093907/160891494/ccs	chr13	-	2886	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	140	-135	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	33.9593875091999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGATTTCTTATTAT	NA	False	NA	NA	False	ACTAAA	-42	NA	74956789	74842541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
m54284U_201014_093907/160892888/ccs	chr11	+	2949	1	Antisense	novelGene_ENSMUSG00000018509.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62425129	62428078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_62425100_62428100
m54284U_201014_093907/161023146/ccs	chr1	+	223	1	Intergenic	novelGene_117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAAAAAAAAGGAC	NA	False	NA	NA	False	AATAAA	-10	NA	51560387	51560610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_51560400_51560600
m54284U_201014_093907/161349810/ccs	chr2	-	1756	9	NIC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	189	-1017	combination_of_known_junctions	FALSE	canonical	3	260	junction_8	4307.853872217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGAAGTCGATCTGTC	3974	False	NA	-23	True	ATTAAA	-17	NA	154734513	154714354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734028
m54284U_201014_093907/161546429/ccs	chr1	+	198	1	Intergenic	novelGene_208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGCAGTATTT	NA	False	NA	NA	False	NA	NA	NA	78601421	78601619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_78601400_78601600
m54284U_201014_093907/161745147/ccs	chr5	-	4272	25	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	48	junction_13	230.720155015888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
m54284U_201014_093907/161940611/ccs	chr12	+	202	1	Intergenic	novelGene_6712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGAGCCTCTTTCCAA	3582	False	NA	NA	False	NA	NA	NA	72739459	72739661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_72739500_72739700
m54284U_201014_093907/162071609/ccs	chr11	+	183	1	Intergenic	novelGene_5673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGAGGATTAGCTTT	NA	False	NA	NA	False	NA	NA	NA	4826988	4827171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4827000_4827200
m54284U_201014_093907/162072492/ccs	chr1	-	167	1	Intergenic	novelGene_347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAAAGTATATCTGC	NA	False	NA	NA	False	NA	NA	NA	136369957	136369790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_136369800_136370000
m54284U_201014_093907/162138011/ccs	chr8	-	1398	7	NIC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	47	junction_5	768.619704405241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746680_85750806_85750955_85751733
m54284U_201014_093907/162138583/ccs	chr8	-	2547	7	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_1	171.289229083442	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	110335052	110320108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_110320762_110321251_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
m54284U_201014_093907/162204237/ccs	chr10	-	2267	10	NIC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	83	0	intron_retention	FALSE	canonical	3	84	junction_3	20.8273324690844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTAGTTCCTCAGCTC	NA	False	NA	-17	True	AATAAA	-18	NA	79820081	79812951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79813688_79813796_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
m54284U_201014_093907/162530713/ccs	chr18	+	175	1	Intergenic	novelGene_9044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAGAGGATATTA	NA	False	NA	NA	False	NA	NA	NA	77928847	77929022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_77928800_77929000
m54284U_201014_093907/16255090/ccs	chr14	+	2802	1	Intergenic	novelGene_7482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATGCGACTTGCAATT	NA	False	NA	NA	False	NA	NA	NA	57011630	57014432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_57011600_57014400
m54284U_201014_093907/162662250/ccs	chr6	+	145	1	Intergenic	novelGene_3205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTAGCTGACCTGCA	NA	False	NA	NA	False	NA	NA	NA	38409628	38409773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38409600_38409800
m54284U_201014_093907/162728451/ccs	chr16	-	4859	14	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	744	junction_6	126.812305975191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4866651_4867669
m54284U_201014_093907/162859209/ccs	chr15	+	177	1	Intergenic	novelGene_7694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTGTGA	NA	False	NA	NA	False	NA	NA	NA	39045856	39046033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_39045900_39046000
m54284U_201014_093907/163447362/ccs	chr18	+	185	1	Intergenic	novelGene_8816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAATAGGCTTTATCCC	NA	False	NA	NA	False	NA	NA	NA	11912308	11912493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_11912300_11912500
m54284U_201014_093907/163449608/ccs	chr1	-	814	7	NIC	ENSMUSG00000026035.16	novel	896	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	60.3869467131212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGAGTGTCCTTTTTT	NA	False	NA	-2	True	AATAGA	-25	NA	58484641	58470155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484568
m54284U_201014_093907/163643783/ccs	chr16	-	3139	4	ISM	ENSMUSG00000051980.14	ENSMUST00000063597.14	4534	7	52036	0	51508	0	3prime_fragment	FALSE	canonical	1	1	junction_3	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTATAAGGCAGTATTA	3878	False	NA	NA	False	TATAAA	-21	NA	36330460	36314057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_-_36316337_36317951_36318076_36320538_36320770_36329955
m54284U_201014_093907/163774820/ccs	chr6	+	208	1	Intergenic	novelGene_3435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTTAATCAAATAGTCC	7746	False	NA	NA	False	NA	NA	NA	116145183	116145391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_116145200_116145400
m54284U_201014_093907/163775578/ccs	chr1	+	177	1	Intergenic	novelGene_402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATAACAACCAA	NA	False	NA	NA	False	NA	NA	NA	156110616	156110793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156110600_156110800
m54284U_201014_093907/163776814/ccs	chr15	-	175	1	Intergenic	novelGene_7860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCCTCTGTGGACTGT	NA	False	NA	NA	False	NA	NA	NA	82102782	82102607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_82102600_82102800
m54284U_201014_093907/16385912/ccs	chr8	+	235	1	Intergenic	novelGene_4505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGCCATTATAAAGCTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	111991261	111991496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111991300_111991500
m54284U_201014_093907/164037736/ccs	chr17	+	6166	1	NIC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	-57	351	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6869133	6875299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_6869100_6875300
m54284U_201014_093907/164039035/ccs	chr7	+	143	1	Intergenic	novelGene_3747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATCATTTATGGAG	NA	False	NA	NA	False	NA	NA	NA	28404077	28404220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28404100_28404200
m54284U_201014_093907/164039083/ccs	chr17	-	178	1	Intergenic	novelGene_8418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTACCACTACCATCAG	NA	False	NA	-26	True	NA	NA	NA	24945138	24944960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24945000_24945100
m54284U_201014_093907/1640935/ccs	chr18	+	1270	1	Antisense	novelGene_ENSMUSG00000118134.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGCACCAGTGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	67908814	67910084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_+_67908800_67910100
m54284U_201014_093907/164429996/ccs	chr7	+	190	1	Intergenic	novelGene_3611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAAGTAGCAGCG	887	False	NA	NA	False	NA	NA	NA	3304591	3304781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3304600_3304800
m54284U_201014_093907/164495532/ccs	chr11	+	167	1	Intergenic	novelGene_6077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAGAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	79162579	79162746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79162600_79162700
m54284U_201014_093907/164561524/ccs	chr10	+	172	1	Intergenic	novelGene_5373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTTAAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67048096	67048268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_67048100_67048300
m54284U_201014_093907/164561828/ccs	chr10	-	182	1	Intergenic	novelGene_5344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCAAGGTTTATCACCA	NA	False	NA	NA	False	NA	NA	NA	62384261	62384079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62384100_62384300
m54284U_201014_093907/164626992/ccs	chr10	+	5512	1	Antisense	novelGene_ENSMUSG00000062075.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTATTAGCAAGCAGTCT	NA	False	NA	NA	False	NA	NA	NA	80743855	80749367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_80743900_80749400
m54284U_201014_093907/164627800/ccs	chr15	+	193	1	Intergenic	novelGene_7818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATAAATTCTCGTG	NA	False	NA	NA	False	NA	NA	NA	79727076	79727269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_79727100_79727300
m54284U_201014_093907/164628158/ccs	chr2	+	990	1	Intergenic	novelGene_1039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACATGTATATATGGCAT	NA	False	NA	NA	False	NA	NA	NA	121897422	121898412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121897400_121898400
m54284U_201014_093907/164694129/ccs	chr8	+	1469	1	NIC	ENSMUSG00000031574.9	novel	4046	7	NA	NA	2481	1202	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26300982	26302451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_26301000_26302500
m54284U_201014_093907/164758662/ccs	chr4	-	2725	19	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_18	50.3518790949758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACTTGTTTGTTATTT	-6	True	NA	3	True	AATAAA	-24	NA	25281821	25250146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280720_25281675
m54284U_201014_093907/164891135/ccs	chr3	+	157	1	Intergenic	novelGene_1676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	129039985	129040142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_129040000_129040100
m54284U_201014_093907/165413065/ccs	chr15	+	187	1	Intergenic	novelGene_7789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAATATTTAAGC	NA	False	NA	NA	False	NA	NA	NA	77116850	77117037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_77116800_77117000
m54284U_201014_093907/165610859/ccs	chr14	+	7751	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_27	41.5514808978429	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8215	False	NA	14	True	AATAAA	-21	NA	30741094	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
m54284U_201014_093907/165743180/ccs	chr2	+	1639	1	ISM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	28703	0	18600	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTGGTCCTCTTAC	NA	False	NA	29	True	ATTAAA	-23	NA	128936564	128938203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_128936600_128938200
m54284U_201014_093907/165807608/ccs	chr15	+	177	1	Intergenic	novelGene_7688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACAGCTGGAATGTTTT	NA	False	NA	NA	False	NA	NA	NA	37949354	37949531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_37949400_37949500
m54284U_201014_093907/165807749/ccs	chr5	+	277	1	ISM	ENSMUSG00000029361.19	ENSMUST00000142742.9	10123	29	116714	0	39389	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCCGGCTGGTGT	NA	False	NA	11	True	ATTAAA	-18	NA	118096628	118096905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_118096600_118096900
m54284U_201014_093907/166266574/ccs	chr11	+	175	1	Intergenic	novelGene_5704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16699757	16699932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_16699800_16699900
m54284U_201014_093907/166267613/ccs	chr4	+	188	1	Antisense	novelGene_ENSMUSG00000086127.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGTTTTAAATGCCAT	NA	False	NA	NA	False	NA	NA	NA	33304805	33304993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_+_33304800_33305000
m54284U_201014_093907/166331939/ccs	chr11	-	2470	5	NIC	ENSMUSG00000011254.17	novel	2250	6	NA	NA	0	-1019	intron_retention	FALSE	canonical	3	110	junction_2	13.8270568090248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGGAGTCATTTTTAGC	6301	False	NA	0	True	TATAAA	-19	NA	45846321	45838688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_45839156_45841022_45842459_45843561_45843732_45844882_45845060_45846101
m54284U_201014_093907/166527911/ccs	chr11	-	90	1	Intergenic	novelGene_6479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATAGGGCTTTTAAACA	9793	False	NA	19	True	NA	NA	NA	116595243	116595153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116595200_116595200
m54284U_201014_093907/166528114/ccs	chr4	-	4494	25	NIC	ENSMUSG00000028430.15	novel	4599	26	NA	NA	181	0	intron_retention	FALSE	canonical	3	306	junction_15	31.7042540082908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGACTTGTCTTTCCTCTT	30	False	41124289	-4	True	NA	NA	NA	41124274	41114426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
m54284U_201014_093907/166528672/ccs	chr17	-	1128	6	NIC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	147.212227752996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	-3	True	AATAAA	-19	NA	36208012	36203568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207936
m54284U_201014_093907/166789470/ccs	chr16	+	468	4	NIC	ENSMUSG00000046516.11	novel	444	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_3	1753.17641883398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTTGTGTTTCTTTT	NA	False	NA	28	True	ATTAAA	-30	NA	38167383	38173125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_38167570_38169602_38169692_38170038_38170094_38172987
m54284U_201014_093907/166791757/ccs	chr12	-	1165	4	ISM	ENSMUSG00000073164.12	ENSMUST00000149246.8	3370	5	41	5678	0	0	5prime_fragment	FALSE	canonical	0	0	junction_2	1.69967317119759	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCAGCTGAGCTCATC	NA	False	NA	-7	True	NA	NA	NA	23060244	23009677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_-_23010256_23042788_23042850_23043051_23043179_23059845
m54284U_201014_093907/16712464/ccs	chr10	+	179	1	Intergenic	novelGene_5506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAAATTAGTTG	1643	False	NA	NA	False	NA	NA	NA	93642836	93643015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_93642800_93643000
m54284U_201014_093907/167249135/ccs	chr1	-	191	1	Intergenic	novelGene_328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTAATGTTATAT	1528	False	NA	NA	False	NA	NA	NA	134404104	134403913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_134403900_134404100
m54284U_201014_093907/167313489/ccs	chr3	-	3505	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	282.570306387855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201014_093907/167316312/ccs	chr7	-	182	1	Intergenic	novelGene_3802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAAGAGGCAA	NA	False	NA	NA	False	NA	NA	NA	39385431	39385249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_39385200_39385400
m54284U_201014_093907/167444917/ccs	chr17	-	174	1	Intergenic	novelGene_8347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAAATTCACTTTCAT	NA	False	NA	NA	False	NA	NA	NA	6162229	6162055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_6162100_6162200
m54284U_201014_093907/167446648/ccs	chr19	-	2027	7	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	104	0	intron_retention	FALSE	canonical	3	34	junction_5	42.2005792482626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9857	False	NA	-2	True	NA	NA	NA	61215570	61212839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214823_61214962_61215093_61215243_61215365_61215467
m54284U_201014_093907/167575644/ccs	chr14	+	202	1	Intergenic	novelGene_7381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTGGTTTAAAACAGAA	NA	False	NA	NA	False	NA	NA	NA	30259577	30259779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_30259600_30259800
m54284U_201014_093907/167641398/ccs	chrX	+	163	1	Intergenic	novelGene_9645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTTTAAAAAAAAAAACAC	NA	False	NA	NA	False	NA	NA	NA	139348184	139348347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_139348200_139348300
m54284U_201014_093907/167642219/ccs	chr9	+	185	1	Intergenic	novelGene_5007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCAGGGTGTGGGTT	NA	False	NA	NA	False	NA	NA	NA	96069534	96069719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96069500_96069700
m54284U_201014_093907/167708449/ccs	chr10	-	1185	1	FSM	ENSMUSG00000048185.6	ENSMUST00000054760.6	425	1	0	-760	0	760	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTCGAAGAAAAAAAAAA	NA	False	NA	29	True	ATTAAA	-18	NA	63257568	63256383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_63256400_63257600
m54284U_201014_093907/167773299/ccs	chr8	+	177	1	Intergenic	novelGene_4332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	3617	False	NA	NA	False	NA	NA	NA	71334344	71334521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_71334300_71334500
m54284U_201014_093907/167773998/ccs	chr16	+	206	1	Intergenic	novelGene_8077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	13585514	13585720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13585500_13585700
m54284U_201014_093907/16777718/ccs	chr14	-	189	1	Intergenic	novelGene_7526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTGAAGAATGGTCATT	NA	False	NA	NA	False	NA	NA	NA	68224911	68224722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_68224700_68224900
m54284U_201014_093907/167839320/ccs	chr1	+	177	1	Intergenic	novelGene_267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	111824484	111824661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_111824500_111824700
m54284U_201014_093907/167971160/ccs	chr9	+	185	1	Intergenic	novelGene_4807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACCTCTCTTCAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58077170	58077355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_58077200_58077400
m54284U_201014_093907/168101040/ccs	chr15	+	173	1	Intergenic	novelGene_7762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAATAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	75718798	75718971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_75718800_75719000
m54284U_201014_093907/168364166/ccs	chr7	+	156	1	Intergenic	novelGene_3896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	75012958	75013114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_75013000_75013100
m54284U_201014_093907/168427766/ccs	chr4	-	182	1	Intergenic	novelGene_1838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGTACTCCCAAA	NA	False	NA	NA	False	NA	NA	NA	44248510	44248328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_44248300_44248500
m54284U_201014_093907/16843481/ccs	chr4	+	204	1	Intergenic	novelGene_2102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAGAAAGT	9608	False	NA	NA	False	NA	NA	NA	124761236	124761440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_124761200_124761400
m54284U_201014_093907/168757695/ccs	chr12	+	188	1	Intergenic	novelGene_6838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTTGGATGTTATCTC	NA	False	NA	NA	False	NA	NA	NA	98845949	98846137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_98845900_98846100
m54284U_201014_093907/168757935/ccs	chr9	+	172	1	Intergenic	novelGene_4911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAAGAA	2327	False	NA	3	True	NA	NA	NA	70323956	70324128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_70324000_70324100
m54284U_201014_093907/168821119/ccs	chr1	-	203	1	Intergenic	novelGene_318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	709	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCGGCTGAAGCTGGT	NA	False	NA	NA	False	NA	NA	NA	132964019	132963816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_132963800_132964000
m54284U_201014_093907/168822988/ccs	chr6	+	168	1	Intergenic	novelGene_3208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	38453785	38453953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38453800_38454000
m54284U_201014_093907/168954602/ccs	chr17	+	184	1	Intergenic	novelGene_8570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGGTCGAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	35959629	35959813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35959600_35959800
m54284U_201014_093907/169019148/ccs	chr11	-	178	1	Intergenic	novelGene_5853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAGAAAAGAAAA	21	False	NA	NA	False	NA	NA	NA	55419888	55419710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_55419700_55419900
m54284U_201014_093907/169083503/ccs	chr16	+	2705	17	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	61.7929696142692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTAGAGTTTAAGT	NA	False	NA	10	True	AATAAA	-18	NA	87251914	87280405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_87251991_87255528_87255631_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
m54284U_201014_093907/16911108/ccs	chr19	+	177	1	Intergenic	novelGene_9355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGAAACCTGGGC	NA	False	NA	NA	False	NA	NA	NA	60581083	60581260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_60581100_60581300
m54284U_201014_093907/169149548/ccs	chr5	+	183	1	Intergenic	novelGene_3085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAATCTTTGAGA	NA	False	NA	NA	False	AGTAAA	-5	NA	148922268	148922451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_148922300_148922500
m54284U_201014_093907/169411658/ccs	chr5	-	2101	14	NNC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_13	150.386877811036	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755373	22691486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753013_22755189
m54284U_201014_093907/169413065/ccs	chr19	-	184	1	Intergenic	novelGene_9352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAGAGAGACAGAGAG	NA	False	NA	NA	False	NA	NA	NA	57718285	57718101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_57718100_57718300
m54284U_201014_093907/169478222/ccs	chr11	+	191	1	Intergenic	novelGene_5650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGCCAAAACAAACCAAACA	NA	False	NA	NA	False	NA	NA	NA	3277888	3278079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_3277900_3278100
m54284U_201014_093907/169543864/ccs	chr15	+	201	1	Intergenic	novelGene_7624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGAGGGTGCTGTTAGTG	NA	False	NA	NA	False	NA	NA	NA	8290496	8290697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8290500_8290700
m54284U_201014_093907/16976405/ccs	chr8	+	176	1	Intergenic	novelGene_4538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	119906939	119907115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_119906900_119907100
m54284U_201014_093907/169871029/ccs	chr18	+	256	1	Intergenic	novelGene_8916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATAAATACATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	36845502	36845758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_36845500_36845800
m54284U_201014_093907/169871208/ccs	chr15	+	208	1	Intergenic	novelGene_7727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTAGGACCTGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	57954925	57955133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_57954900_57955100
m54284U_201014_093907/169871313/ccs	chr15	+	1279	11	NNC	ENSMUSG00000046434.17	novel	1283	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_9	5069.46638316105	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTTCTTGTCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	103148858	103155119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103154776_103154849_103154971
m54284U_201014_093907/170068460/ccs	chr17	-	183	1	Intergenic	novelGene_8448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATAAGCCGGGCAT	NA	False	NA	NA	False	NA	NA	NA	27396555	27396372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_27396400_27396600
m54284U_201014_093907/170395960/ccs	chr5	+	1981	10	NNC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	96.9682396776019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGTCTCAAATG	4928	False	NA	NA	False	NA	NA	NA	130285875	130314227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130313523
m54284U_201014_093907/170461139/ccs	chr10	+	179	1	Intergenic	novelGene_5490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTTGCTGCCTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	88563480	88563659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_88563500_88563700
m54284U_201014_093907/170525540/ccs	chr2	+	203	1	Intergenic	novelGene_1200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTCATAAAAATCGCAT	NA	False	NA	NA	False	ATTAAA	-11	NA	160509056	160509259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_160509100_160509300
m54284U_201014_093907/170985879/ccs	chr1	+	179	1	Intergenic	novelGene_428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGAAAATAAAGAGTTTA	NA	False	NA	NA	False	NA	NA	NA	160749431	160749610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_160749400_160749600
m54284U_201014_093907/171180176/ccs	chr17	-	173	1	Intergenic	novelGene_8669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	60586897	60586724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_60586700_60586900
m54284U_201014_093907/171311598/ccs	chrX	+	187	1	Intergenic	novelGene_9543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGGTAGAAACCAAAATG	NA	False	NA	NA	False	NA	NA	NA	93257248	93257435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_93257200_93257400
m54284U_201014_093907/171313364/ccs	chr16	+	178	1	Intergenic	novelGene_8332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAGAAAGAAAATAGA	875	False	NA	NA	False	NA	NA	NA	95901418	95901596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_95901400_95901600
m54284U_201014_093907/171377380/ccs	chr1	+	179	1	Intergenic	novelGene_191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAAAATATTTTTA	NA	False	NA	NA	False	NA	NA	NA	74749457	74749636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74749500_74749600
m54284U_201014_093907/171443293/ccs	chr17	+	200	1	Intergenic	novelGene_8381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTTTCATTCTG	NA	False	NA	NA	False	NA	NA	NA	17116349	17116549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_17116300_17116500
m54284U_201014_093907/171836020/ccs	chr8	-	177	1	Intergenic	novelGene_4194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4432535	4432358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_4432400_4432500
m54284U_201014_093907/171968662/ccs	chr8	+	5447	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	128	junction_14	73.5629988030627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
m54284U_201014_093907/172230738/ccs	chr18	-	3245	11	NIC	ENSMUSG00000024515.14	novel	3384	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	125.498844616196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATTCTAGATTTGGTT	NA	False	NA	-10	True	AATAAA	-19	NA	73836851	73772079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_73773541_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
m54284U_201014_093907/17237406/ccs	chr10	+	188	1	Intergenic	novelGene_5308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGCAAGCTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	59102776	59102964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_59102800_59103000
m54284U_201014_093907/172427314/ccs	chr8	+	190	1	Intergenic	novelGene_4498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGTATATGAGTACACT	1704	False	NA	29	True	NA	NA	NA	111942455	111942645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111942500_111942600
m54284U_201014_093907/172491590/ccs	chr14	-	189	1	Intergenic	novelGene_7435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATAAATAAATAAG	1187	False	NA	NA	False	NA	NA	NA	51197756	51197567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_51197600_51197800
m54284U_201014_093907/173081658/ccs	chr7	-	1723	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	321.136283214299	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761734	16738564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16761617
m54284U_201014_093907/173147283/ccs	chr10	+	583	3	Antisense	novelGene_ENSMUSG00000058806.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	20	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACTGTAAAATGAGTTTC	NA	False	NA	7	True	NA	NA	NA	61670283	61710004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_61670501_61698165_61698280_61709752
m54284U_201014_093907/173213391/ccs	chr19	+	181	1	Intergenic	novelGene_9074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	3882528	3882709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3882500_3882700
m54284U_201014_093907/173279703/ccs	chr2	+	3623	19	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_13	159.424243784228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	634	False	NA	36	True	AATAAA	-37	NA	31462803	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
m54284U_201014_093907/173343727/ccs	chr1	-	175	1	Intergenic	novelGene_241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGGTTTTTCGAG	NA	False	NA	NA	False	NA	NA	NA	88955867	88955692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_88955700_88955900
m54284U_201014_093907/173343866/ccs	chr14	+	185	1	Intergenic	novelGene_7384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTCTTTTTGTTTTTT	9748	False	NA	NA	False	NA	NA	NA	30606398	30606583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_30606400_30606600
m54284U_201014_093907/173606376/ccs	chr17	+	3998	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	262	junction_8	140.70992840101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1176	False	NA	12	True	AATAAA	-20	NA	24888660	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24899250_24899597_24899773_24899854_24900006_24900082
m54284U_201014_093907/17367087/ccs	chr4	-	936	7	NNC	ENSMUSG00000006216.11	novel	2370	20	NA	NA	-2973	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_6	35.5387112878337	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTGTCCCCTCTCCTCCC	4162	False	NA	-4	True	AATAAA	-18	NA	141135641	141131663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_141131944_141132063_141132151_141132362_141132447_141132582_141132672_141134399_141134534_141135114_141135329_141135593
m54284U_201014_093907/173672770/ccs	chr9	+	172	1	Intergenic	novelGene_5012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTCCTAATAATGCAGGC	NA	False	NA	NA	False	NA	NA	NA	96178604	96178776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96178600_96178800
m54284U_201014_093907/17367821/ccs	chr16	+	3673	1	Genic_Genomic	ENSMUSG00000075122.6	novel	NA	NA	NA	NA	35976	2431	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38315455	38319128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_+_38315500_38319100
m54284U_201014_093907/17369088/ccs	chr10	-	182	1	Intergenic	novelGene_5543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTAAGACT	3246	False	NA	NA	False	NA	NA	NA	115312374	115312192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_115312200_115312400
m54284U_201014_093907/173738180/ccs	chr18	-	188	1	Intergenic	novelGene_8896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGCAAGGTTTTGAAC	8332	False	NA	NA	False	NA	NA	NA	35821799	35821611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35821600_35821800
m54284U_201014_093907/173999974/ccs	chr2	+	287	1	Intergenic	novelGene_1273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	168686853	168687140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168686900_168687100
m54284U_201014_093907/174063867/ccs	chr10	+	2169	4	NIC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	76.916982664573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382619	4405140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_4382712_4389491_4389737_4400646_4400810_4403471
m54284U_201014_093907/174129709/ccs	chr11	+	185	1	Intergenic	novelGene_6028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTGAGTGTGACAAGAAA	NA	False	NA	NA	False	NA	NA	NA	76040661	76040846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76040700_76040800
m54284U_201014_093907/174131052/ccs	chr3	+	171	1	Intergenic	novelGene_1596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAATAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100575623	100575794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_100575600_100575800
m54284U_201014_093907/174261991/ccs	chr3	-	2525	1	NIC	ENSMUSG00000027905.16	novel	2905	11	NA	NA	0	-3439	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105594768	105592243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_105592200_105594800
m54284U_201014_093907/174326881/ccs	chr6	-	3333	3	NIC	ENSMUSG00000059486.12	novel	3816	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	92.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTGGTTTTTTGGTTT	9703	False	NA	-1	True	AATAAA	-16	NA	56774721	56754509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_56757399_56758785_56758952_56774443
m54284U_201014_093907/174392141/ccs	chr7	+	192	1	Intergenic	novelGene_3735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	28038758	28038950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28038800_28039000
m54284U_201014_093907/174459671/ccs	chr13	-	175	1	Intergenic	novelGene_7025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATTACAAGAGTATA	NA	False	NA	NA	False	NA	NA	NA	38742662	38742487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_38742500_38742700
m54284U_201014_093907/174654528/ccs	chr9	+	175	1	Intergenic	novelGene_4761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAATCACAG	NA	False	NA	NA	False	NA	NA	NA	50827154	50827329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_50827200_50827300
m54284U_201014_093907/174655610/ccs	chr2	+	172	1	Intergenic	novelGene_1156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAGAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	155186178	155186350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155186200_155186400
m54284U_201014_093907/174720711/ccs	chr6	-	171	1	Intergenic	novelGene_3388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGAGAAAGAAAACAA	NA	False	NA	1	True	NA	NA	NA	91448522	91448351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_91448400_91448500
m54284U_201014_093907/175047117/ccs	chr15	+	387	1	Intergenic	novelGene_7701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	44773360	44773747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_44773400_44773700
m54284U_201014_093907/175048345/ccs	chr5	-	206	1	Intergenic	novelGene_2661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGCATTTAAATTTTAG	NA	False	NA	NA	False	NA	NA	NA	92180307	92180101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92180100_92180300
m54284U_201014_093907/175311030/ccs	chr7	-	4245	15	NIC	ENSMUSG00000078671.12	novel	9085	39	NA	NA	-125	9097	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	11.74581992516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTTAATGAGTTGAACA	NA	False	NA	NA	False	NA	NA	NA	73187494	73138357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73187056
m54284U_201014_093907/175375433/ccs	chr7	-	190	1	Intergenic	novelGene_3947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTATTGAGTTGAAGCC	NA	False	NA	NA	False	NA	NA	NA	89659834	89659644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_89659600_89659800
m54284U_201014_093907/175506585/ccs	chr5	+	157	1	Intergenic	novelGene_2771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2795	False	NA	NA	False	NA	NA	NA	110898082	110898239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110898100_110898200
m54284U_201014_093907/175704057/ccs	chr11	+	187	1	Intergenic	novelGene_5743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTTTAAAGACAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	23453957	23454144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_23454000_23454100
m54284U_201014_093907/176030928/ccs	chr1	+	219	1	Intergenic	novelGene_529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAATAAGTGGGAGGG	NA	False	NA	NA	False	NA	NA	NA	181911363	181911582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_181911400_181911600
m54284U_201014_093907/176031962/ccs	chr10	-	5297	19	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	458	junction_2	243.043333026016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269481	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80246109_80246231_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
m54284U_201014_093907/176095604/ccs	chr12	+	183	1	Intergenic	novelGene_6649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATCTATGGGGGCCATA	NA	False	NA	NA	False	NA	NA	NA	54984673	54984856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_54984700_54984900
m54284U_201014_093907/176096809/ccs	chr10	-	463	4	NIC	ENSMUSG00000035215.10	novel	468	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	184	junction_3	2016.46428736594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTCCCTTCCTGCTCT	NA	False	NA	-21	True	AATAAA	-17	NA	80691043	80688666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80688935_80689591_80689664_80690451_80690546_80691014
m54284U_201014_093907/17629488/ccs	chr13	+	942	5	NIC	ENSMUSG00000052293.15	novel	1230	3	NA	NA	0	10299	combination_of_known_splicesites	FALSE	canonical	3	171	junction_1	308.682988679325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATCTCTTTAATAGTA	NA	False	NA	37	True	AATAAA	-14	NA	100788114	100802867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_100788226_100790698_100790792_100800402_100800462_100800558_100800705_100802334
m54284U_201014_093907/17630959/ccs	chr1	+	5288	1	Antisense	novelGene_ENSMUSG00000025982.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAATTACATACATTTCC	912	False	NA	NA	False	NA	NA	NA	55035004	55040292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_55035000_55040300
m54284U_201014_093907/17631678/ccs	chr10	-	2153	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_14	117.894566833628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTTTGTAGTTACTT	NA	False	NA	-2	True	ATTAAA	-21	NA	115087372	115035300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115076753_115076853_115087286
m54284U_201014_093907/176425202/ccs	chr6	+	2840	1	Intergenic	novelGene_3550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAAAAAAAAGGATGGGG	NA	False	NA	NA	False	NA	NA	NA	134761637	134764477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_134761600_134764500
m54284U_201014_093907/176686578/ccs	chr17	-	2619	10	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9221	junction_4	999.096159437353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884197	45878700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
m54284U_201014_093907/176817049/ccs	chr2	-	171	1	Intergenic	novelGene_1011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATCTAGTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	119810920	119810749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_119810700_119810900
m54284U_201014_093907/177015377/ccs	chr8	-	2266	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	87.915797784016	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTGATTGACTTATT	NA	False	NA	-1	True	AATAAA	-26	NA	22675835	22658460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665812_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
m54284U_201014_093907/177078310/ccs	chr1	-	5289	20	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_19	15.966724400723	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTCTCATGTTGACT	NA	False	NA	-3	True	ATTAAA	-25	NA	24139297	24050761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24139141
m54284U_201014_093907/177081034/ccs	chr9	+	1986	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	128	junction_6	19.4679223339318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447084	108449973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449661_108449749
m54284U_201014_093907/177211063/ccs	chr10	+	187	1	Intergenic	novelGene_5233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAATCAGTTCACAATG	NA	False	NA	NA	False	NA	NA	NA	25160747	25160934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_25160700_25160900
m54284U_201014_093907/177276003/ccs	chr2	+	1609	6	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	-53	-440	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	126.631117818647	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGACTCATCAGTAT	NA	False	NA	NA	False	NA	NA	NA	177401027	177411315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168
m54284U_201014_093907/177473279/ccs	chr11	-	171	1	Intergenic	novelGene_5982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	72933414	72933243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_72933200_72933400
m54284U_201014_093907/177537617/ccs	chr6	+	186	1	Intergenic	novelGene_3261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCCAGGCAGATGAACA	NA	False	NA	NA	False	NA	NA	NA	49135001	49135187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_49135000_49135200
m54284U_201014_093907/17761458/ccs	chr8	+	217	1	Intergenic	novelGene_4283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTCCATGGCTATAATG	3052	False	NA	NA	False	NA	NA	NA	45787807	45788024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_45787800_45788000
m54284U_201014_093907/177668594/ccs	chr12	-	4116	1	Intergenic	novelGene_6794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84282505	84278389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_84278400_84282500
m54284U_201014_093907/177734023/ccs	chr9	-	1640	11	NIC	ENSMUSG00000062270.15	novel	1824	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	2169.84053791978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996751	89973723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
m54284U_201014_093907/177864895/ccs	chr4	-	173	1	Intergenic	novelGene_2065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	119367499	119367326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_119367300_119367500
m54284U_201014_093907/177866765/ccs	chr17	+	172	1	Intergenic	novelGene_8660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTGGAT	NA	False	NA	NA	False	NA	NA	NA	57048796	57048968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_57048800_57049000
m54284U_201014_093907/178192439/ccs	chr6	-	2737	20	NNC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_19	232.606476378422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571891	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571624
m54284U_201014_093907/178325409/ccs	chr4	+	198	1	Intergenic	novelGene_1996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACAGAAAGCAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	108273907	108274105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_108273900_108274100
m54284U_201014_093907/178457021/ccs	chr4	-	189	1	Intergenic	novelGene_1858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGAGTTCTGCATA	NA	False	NA	-9	True	AATAAA	-10	NA	48579022	48578833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_48578800_48579000
m54284U_201014_093907/178586243/ccs	chr7	+	182	1	ISM	ENSMUSG00000025479.10	ENSMUST00000026552.9	1833	9	11061	0	10319	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGCATATGGAGTTCC	1146	False	NA	NA	False	NA	NA	NA	140354712	140354894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_140354700_140354900
m54284U_201014_093907/178586306/ccs	chr9	+	3724	19	NNC	ENSMUSG00000032512.8	novel	3845	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	64.7542362406593	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCTGGACATGTT	NA	False	NA	30	True	AATAAA	-18	NA	119723960	119755653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738521_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
m54284U_201014_093907/178653995/ccs	chr5	+	174	1	Intergenic	novelGene_2823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTTTGTTCCTGAATT	NA	False	NA	NA	False	NA	NA	NA	117627222	117627396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_117627200_117627400
m54284U_201014_093907/178785034/ccs	chr17	+	1462	1	NIC	ENSMUSG00000050762.6	novel	1253	6	NA	NA	6344	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	24263461	24264923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24263500_24264900
m54284U_201014_093907/178847889/ccs	chr17	+	352	1	Intergenic	novelGene_8583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1435	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTAGTCAGTGTTCTT	NA	False	NA	NA	False	NA	NA	NA	36542144	36542496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_36542100_36542500
m54284U_201014_093907/179044697/ccs	chr7	-	5264	14	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	0	-81	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	43.9588295820629	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGCTTTTCCAATGAA	9808	False	NA	NA	False	AATAAA	-22	NA	34012976	33937085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33938663_33939168_33939248_33939933_33940066_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
m54284U_201014_093907/179045537/ccs	chr5	+	182	1	Intergenic	novelGene_2569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAATAGGAAGTCTTCAT	NA	False	NA	NA	False	NA	NA	NA	43710067	43710249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_43710100_43710200
m54284U_201014_093907/179110396/ccs	chr16	+	4908	11	NIC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	353	junction_3	31.5976264931403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTATTTGTTTAATAAAA	NA	False	NA	-13	True	AATAAA	-17	NA	44979147	45008257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
m54284U_201014_093907/179175463/ccs	chr2	-	186	1	Intergenic	novelGene_725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCAGAGGTGGTGTATA	NA	False	NA	NA	False	NA	NA	NA	32743905	32743719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32743700_32743900
m54284U_201014_093907/179177303/ccs	chr18	+	1287	3	NIC	ENSMUSG00000037058.17	novel	1475	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	1533	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCTTGTGTTATTGG	4664	False	NA	22	True	AATAAA	-16	NA	35731693	35750239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35731813_35746375_35746556_35749251
m54284U_201014_093907/179307277/ccs	chrX	+	203	1	Intergenic	novelGene_9733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGAGAAGTTTGCAGT	NA	False	NA	NA	False	NA	NA	NA	164960104	164960307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_164960100_164960300
m54284U_201014_093907/179307304/ccs	chr12	-	2900	1	FSM	ENSMUSG00000063632.7	ENSMUST00000079063.7	8311	1	-129	5540	-129	-5540	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGTGGCGAAGCAGAC	NA	False	NA	NA	False	AATAAA	-23	NA	27392702	27389802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_27389800_27392700
m54284U_201014_093907/179439501/ccs	chr1	-	1118	5	NIC	ENSMUSG00000060743.13	novel	724	5	NA	NA	0	130	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	1320.22772656841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTTCTGGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	180641112	180630131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_180630771_180637681_180637836_180639363_180639515_180640254_180640352_180641035
m54284U_201014_093907/179439828/ccs	chr2	+	1408	1	NIC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	0	-6814	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTATATGTATGCAAGT	NA	False	NA	NA	False	NA	NA	NA	30697968	30699376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_30698000_30699400
m54284U_201014_093907/17956888/ccs	chr17	-	198	1	Intergenic	novelGene_8604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCAGAGAGGTAGTCAC	NA	False	NA	NA	False	TTTAAA	-1	NA	45919170	45918972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_45919000_45919200
m54284U_201014_093907/179636550/ccs	chr17	+	1102	8	NNC	ENSMUSG00000034729.17	novel	1017	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	735.935528453965	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7137	False	NA	7	True	NA	NA	NA	47679811	47689606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_47679880_47681212_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
m54284U_201014_093907/179964350/ccs	chr16	+	179	1	Intergenic	novelGene_8204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAAATAACCT	NA	False	NA	NA	False	NA	NA	NA	31923111	31923290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31923100_31923300
m54284U_201014_093907/180356149/ccs	chr7	-	182	1	Intergenic	novelGene_3835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATGGATGTAA	4122	False	NA	NA	False	NA	NA	NA	44925410	44925228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_44925200_44925400
m54284U_201014_093907/18088829/ccs	chr4	+	2725	13	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_2	26.1709126066835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTCACAAGGCTCTC	NA	False	NA	15	True	AATAAA	-15	NA	133829893	133854087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
m54284U_201014_093907/18219274/ccs	chr2	+	174	1	Intergenic	novelGene_1158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCGGAGCAAGACGACC	8899	False	NA	NA	False	NA	NA	NA	155208516	155208690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155208500_155208700
m54284U_201014_093907/18416851/ccs	chr3	+	2081	1	Intergenic	novelGene_1344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGCAAAAACTCTGTAT	NA	False	NA	NA	False	NA	NA	NA	9599271	9601352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_9599300_9601400
m54284U_201014_093907/18548887/ccs	chr2	-	190	1	Intergenic	novelGene_938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGATTCCTAAATTTA	3634	False	NA	NA	False	NA	NA	NA	91632826	91632636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91632600_91632800
m54284U_201014_093907/19136531/ccs	chr3	+	190	1	Intergenic	novelGene_1609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTTAATGCCATCCTCT	NA	False	NA	NA	False	NA	NA	NA	103306314	103306504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_103306300_103306500
m54284U_201014_093907/19268602/ccs	chr2	-	177	1	Intergenic	novelGene_1059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTGTTTCACTGA	5971	False	NA	NA	False	NA	NA	NA	127825875	127825698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_127825700_127825900
m54284U_201014_093907/19268607/ccs	chr5	+	169	1	Intergenic	novelGene_2759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAGAGTAAATA	5491	False	NA	NA	False	NA	NA	NA	110115828	110115997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110115800_110116000
m54284U_201014_093907/19335539/ccs	chr7	+	766	5	NNC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	6377.90041373335	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAATTGATACTTG	1313	False	NA	-18	True	NA	NA	NA	3707040	3709875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3707149_3707325_3707448_3707644_3707768_3708731_3708919_3709649
m54284U_201014_093907/19399047/ccs	chr12	-	160	1	Intergenic	novelGene_6552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGATTTATTTTA	9879	False	NA	NA	False	NA	NA	NA	4907131	4906971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_4907000_4907100
m54284U_201014_093907/19791900/ccs	chr6	-	176	1	Intergenic	novelGene_3242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	47198948	47198772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47198800_47198900
m54284U_201014_093907/19793883/ccs	chr11	+	571	2	NNC	ENSMUSG00000099928.2	novel	422	3	NA	NA	1452	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGCTTAATAGGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95898166	95898881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_95898430_95898573
m54284U_201014_093907/20316864/ccs	chr4	+	188	1	Intergenic	novelGene_2411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAAATTATTAATTT	NA	False	NA	NA	False	NA	NA	NA	152252180	152252368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_152252200_152252400
m54284U_201014_093907/20777711/ccs	chr2	+	193	1	Intergenic	novelGene_1035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTAGAGCCATGGGATA	NA	False	NA	NA	False	NA	NA	NA	121777444	121777637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121777400_121777600
m54284U_201014_093907/20841102/ccs	chr1	-	1559	7	NIC	ENSMUSG00000025939.20	novel	1508	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	195.295289241702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAGTCTGTTCTTAAA	NA	False	NA	NA	False	AATAAA	-17	NA	16689508	16611013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_16612014_16614172_16614257_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
m54284U_201014_093907/20907643/ccs	chr2	+	3247	24	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	9.67955380246139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTATAGCTACGCGT	NA	False	NA	6	True	AATAAA	-17	NA	76236881	76426389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
m54284U_201014_093907/20907844/ccs	chr13	+	202	1	Intergenic	novelGene_7044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCATCAGATCACTGT	7765	False	NA	NA	False	NA	NA	NA	44774386	44774588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_44774400_44774600
m54284U_201014_093907/20908832/ccs	chr5	+	189	1	Intergenic	novelGene_2507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCAGCATGGAGGATAAA	NA	False	NA	NA	False	NA	NA	NA	29904029	29904218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_29904000_29904200
m54284U_201014_093907/21366160/ccs	chr15	+	2388	1	FSM	ENSMUSG00000103906.2	ENSMUST00000192937.2	4801	1	26	2387	26	-2387	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTCTTCCTGGGGA	NA	False	NA	NA	False	ATTAAA	-10	NA	75781609	75783997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_75781600_75784000
m54284U_201014_093907/21433033/ccs	chr2	+	176	1	Intergenic	novelGene_1248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	167101289	167101465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_167101300_167101500
m54284U_201014_093907/21495862/ccs	chrX	-	1208	6	NIC	ENSMUSG00000031320.10	novel	975	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	11043	junction_5	2174.6576190288	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTGCTGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	101232942	101228546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231978_101232903
m54284U_201014_093907/21954748/ccs	chr1	+	178	1	Intergenic	novelGene_459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAACAAACAC	NA	False	NA	NA	False	NA	NA	NA	167166056	167166234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_167166100_167166200
m54284U_201014_093907/22020130/ccs	chr13	+	2138	1	Antisense	novelGene_ENSMUSG00000035248.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59937241	59939379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_+_59937200_59939400
m54284U_201014_093907/22151738/ccs	chr5	+	646	1	Intergenic	novelGene_2497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATTAAAAAAAAAGAGTT	NA	False	NA	NA	False	AATAAA	-12	NA	26280506	26281152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_26280500_26281200
m54284U_201014_093907/22218447/ccs	chr8	-	2381	11	NIC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	23.2381152419898	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337327	78322610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731_78336949_78337290
m54284U_201014_093907/22219334/ccs	chr8	-	1437	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38817	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	84.5113010194495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633340	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43633233
m54284U_201014_093907/2228616/ccs	chr2	-	181	1	Intergenic	novelGene_880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGAGAGTACGTGAA	NA	False	NA	NA	False	NA	NA	NA	77361347	77361166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_77361200_77361300
m54284U_201014_093907/22350226/ccs	chr10	-	196	1	Intergenic	novelGene_5235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTATACAAAGAATCAAC	NA	False	NA	NA	False	NA	NA	NA	25224213	25224017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_25224000_25224200
m54284U_201014_093907/22742061/ccs	chr4	+	200	1	Intergenic	novelGene_2109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAGCCTCAATCCAGA	4419	False	NA	NA	False	NA	NA	NA	125449775	125449975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_125449800_125450000
m54284U_201014_093907/2293929/ccs	chr2	+	810	5	NIC	ENSMUSG00000027203.16	novel	1020	7	NA	NA	-183	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_2	998.653687471288	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACTGGAGAACATGGAGG	NA	False	NA	32	True	AATAAA	-33	NA	125089636	125099668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_125089817_125091085_125091178_125098768_125098844_125098989_125099061_125099276
m54284U_201014_093907/2295474/ccs	chr12	-	175	1	Intergenic	novelGene_6947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAATTAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	118880416	118880241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_118880200_118880400
m54284U_201014_093907/23136258/ccs	chr6	+	154	1	Intergenic	novelGene_3124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGGGGCTATAAGGAA	NA	False	NA	NA	False	AATAAA	-6	NA	29241225	29241379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29241200_29241400
m54284U_201014_093907/23331512/ccs	chr8	+	210	1	Intergenic	novelGene_4600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGTTATTTA	NA	False	NA	NA	False	NA	NA	NA	125322338	125322548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_125322300_125322500
m54284U_201014_093907/23527872/ccs	chr12	+	2856	24	NIC	ENSMUSG00000021000.18	novel	4434	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	102.574109867563	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTGTTTGGTATTAATAA	NA	False	NA	10	True	AATAAA	-18	NA	59178238	59236962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217047_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
m54284U_201014_093907/23528361/ccs	chr4	+	198	1	Intergenic	novelGene_1825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAAAACCAAAACCCC	NA	False	NA	NA	False	NA	NA	NA	43081695	43081893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_43081700_43081900
m54284U_201014_093907/23791352/ccs	chr6	+	171	1	Intergenic	novelGene_3170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTAATTAGT	NA	False	NA	NA	False	NA	NA	NA	35149046	35149217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_35149000_35149200
m54284U_201014_093907/23921570/ccs	chr5	+	209	1	Intergenic	novelGene_2566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAACTAGGAAGTCATT	NA	False	NA	NA	False	NA	NA	NA	38075966	38076175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_38076000_38076200
m54284U_201014_093907/24249136/ccs	chr11	+	180	1	Intergenic	novelGene_6434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATTAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	113561657	113561837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_113561700_113561800
m54284U_201014_093907/24314698/ccs	chr4	+	172	1	Intergenic	novelGene_1733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAATTAGTTGATC	NA	False	NA	NA	False	NA	NA	NA	8643789	8643961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_8643800_8644000
m54284U_201014_093907/2491009/ccs	chr11	+	188	1	Intergenic	novelGene_5974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTTCTTTCAGAGGAC	NA	False	NA	NA	False	NA	NA	NA	72496147	72496335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_72496100_72496300
m54284U_201014_093907/25166212/ccs	chr7	+	191	1	Intergenic	novelGene_4173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACACTGCCAAGTTTGA	NA	False	NA	NA	False	NA	NA	NA	141124982	141125173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_141125000_141125200
m54284U_201014_093907/25166977/ccs	chr1	+	188	1	Intergenic	novelGene_414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTTATGATTAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	156540056	156540244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156540100_156540200
m54284U_201014_093907/25167135/ccs	chr11	-	174	1	Intergenic	novelGene_6319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCACCAAACCCACAGCCT	9638	False	NA	NA	False	NA	NA	NA	100194653	100194479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_100194500_100194700
m54284U_201014_093907/25297844/ccs	chr3	+	177	1	Intergenic	novelGene_1470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGGGGGGGCAGGGGTA	NA	False	NA	4	True	NA	NA	NA	87398829	87399006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_87398800_87399000
m54284U_201014_093907/25363811/ccs	chr5	+	177	1	Intergenic	novelGene_2578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATGTATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54237945	54238122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_54237900_54238100
m54284U_201014_093907/25428758/ccs	chr2	+	212	1	Intergenic	novelGene_1334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGGGGGGGGGGTGTTT	1482	False	NA	NA	False	TTTAAA	-5	NA	181308236	181308448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_181308200_181308400
m54284U_201014_093907/25430475/ccs	chr10	+	161	2	Antisense	novelGene_ENSMUSG00000020262.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	327	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATTAATTATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77179799	77179981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_77179853_77179873
m54284U_201014_093907/25494563/ccs	chr9	+	162	1	Intergenic	novelGene_4956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	77400583	77400745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_77400600_77400700
m54284U_201014_093907/2555961/ccs	chr9	+	1667	1	Intergenic	novelGene_4835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGCTGGGGACACTGGAC	NA	False	NA	NA	False	NA	NA	NA	59844011	59845678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59844000_59845700
m54284U_201014_093907/2557333/ccs	chr11	+	188	1	Intergenic	novelGene_5748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTAAGAGTTTGAATCT	6391	False	NA	NA	False	NA	NA	NA	23901190	23901378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_23901200_23901400
m54284U_201014_093907/2558046/ccs	chr19	-	3604	1	Intergenic	novelGene_9196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TTAAAAAAAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	25736152	25732548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_25732500_25736200
m54284U_201014_093907/26018912/ccs	chr7	+	187	1	Intergenic	novelGene_4149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGTTTCCATGATCAG	NA	False	NA	NA	False	NA	NA	NA	139632549	139632736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_139632500_139632700
m54284U_201014_093907/26149049/ccs	chr5	-	173	1	Genic_Genomic	ENSMUSG00000043036.15	novel	NA	NA	NA	NA	261	55	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAATATTTTTTTAA	NA	False	NA	-13	True	NA	NA	NA	122272617	122272444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_-_122272400_122272600
m54284U_201014_093907/26150280/ccs	chr14	+	173	1	Intergenic	novelGene_7457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATCATGTACC	NA	False	NA	NA	False	NA	NA	NA	54637268	54637441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54637300_54637400
m54284U_201014_093907/26216551/ccs	chr11	-	215	1	Intergenic	novelGene_5789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACGGGCACTATTATAAAT	5285	False	NA	NA	False	AATAAA	-10	NA	46190774	46190559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_46190600_46190800
m54284U_201014_093907/26347086/ccs	chr19	+	177	1	Intergenic	novelGene_9310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAGGAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	46209288	46209465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46209300_46209500
m54284U_201014_093907/26413101/ccs	chr9	-	171	1	Intergenic	novelGene_4959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTGGTTCGA	NA	False	NA	NA	False	NA	NA	NA	77906254	77906083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_77906100_77906300
m54284U_201014_093907/26804928/ccs	chr11	+	175	1	Intergenic	novelGene_5733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAACATGAAT	NA	False	NA	NA	False	NA	NA	NA	23047478	23047653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_23047500_23047700
m54284U_201014_093907/27001991/ccs	chr9	+	172	1	Intergenic	novelGene_4798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTTAAAAAAGATTCA	NA	False	NA	NA	False	NA	NA	NA	57191656	57191828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_57191700_57191800
m54284U_201014_093907/27132330/ccs	chr19	+	188	1	Intergenic	novelGene_9103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	5680673	5680861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_5680700_5680900
m54284U_201014_093907/27134324/ccs	chr7	-	2919	1	NIC	ENSMUSG00000086526.3	novel	483	2	NA	NA	0	-764	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCATTTAGTTAAAGGAAA	NA	False	NA	NA	False	AATAAA	-20	NA	33933527	33930608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33930600_33933500
m54284U_201014_093907/27263153/ccs	chr4	-	228	1	Intergenic	novelGene_2062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATCCCTCTCTCCTCA	NA	False	NA	NA	False	NA	NA	NA	119157650	119157422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_119157400_119157600
m54284U_201014_093907/27265310/ccs	chr12	+	182	1	Intergenic	novelGene_6826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAAAACACTGTAGCT	7382	False	NA	NA	False	NA	NA	NA	87274110	87274292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_87274100_87274300
m54284U_201014_093907/27591077/ccs	chr14	+	196	1	Intergenic	novelGene_7480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCTGAGCTTTTTGAC	4273	False	NA	NA	False	NA	NA	NA	56908199	56908395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_56908200_56908400
m54284U_201014_093907/27723161/ccs	chr7	+	193	1	Intergenic	novelGene_3691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGAAGAGTCGGCATGT	NA	False	NA	NA	False	NA	NA	NA	19487326	19487519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_19487300_19487500
m54284U_201014_093907/27852956/ccs	chr11	+	1505	1	Intergenic	novelGene_5788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGGCAGAATGTTCT	1547	False	NA	NA	False	NA	NA	NA	46126554	46128059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_46126600_46128100
m54284U_201014_093907/27920577/ccs	chr10	+	193	1	Intergenic	novelGene_5578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	633	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTACTGGACATTAATC	NA	False	NA	NA	False	NA	NA	NA	120658243	120658436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_120658200_120658400
m54284U_201014_093907/27920753/ccs	chr13	+	206	1	Intergenic	novelGene_7246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAATTGCTTTAGT	9354	False	NA	NA	False	NA	NA	NA	95706309	95706515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_95706300_95706500
m54284U_201014_093907/28182816/ccs	chr2	-	158	1	Intergenic	novelGene_914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTCTATGGTCCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	90512753	90512595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_90512600_90512800
m54284U_201014_093907/28312729/ccs	chr9	+	190	1	Intergenic	novelGene_4933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAAGAACAGGAAGTG	2570	False	NA	NA	False	NA	NA	NA	72553694	72553884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72553700_72553900
m54284U_201014_093907/28377234/ccs	chr13	-	231	2	Antisense	novelGene_ENSMUSG00000114369.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	465	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGAATCCTTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	120219987	120218677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_-_120218860_120219938
m54284U_201014_093907/28379453/ccs	chr10	-	2732	8	NIC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	325	junction_3	62.2047311016499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	80492328	80478456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80479526_80479659_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
m54284U_201014_093907/28573937/ccs	chr10	-	201	1	Intergenic	novelGene_5625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTACAAAGAGCAGGAGAAA	7731	False	NA	NA	False	NA	NA	NA	128168903	128168702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128168700_128168900
m54284U_201014_093907/28575535/ccs	chr19	+	172	1	Intergenic	novelGene_9184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTTGGGGGAAAAATAA	2477	False	NA	4	True	NA	NA	NA	23093418	23093590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_23093400_23093600
m54284U_201014_093907/28901554/ccs	chr15	+	215	1	Intergenic	novelGene_7912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGAAATGCTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	93423944	93424159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_93423900_93424200
m54284U_201014_093907/28901990/ccs	chr6	-	176	1	Intergenic	novelGene_3487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAAGAGGCT	3983	False	NA	NA	False	NA	NA	NA	122766274	122766098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122766100_122766300
m54284U_201014_093907/29099596/ccs	chr12	+	4171	4	NIC	ENSMUSG00000034157.13	novel	4098	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	46.6976087896015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTCTATTTGCTTTG	NA	False	NA	7	True	AATAAA	-19	NA	86994116	87012136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_86994274_86999517_86999779_87007045_87007216_87008553
m54284U_201014_093907/29165374/ccs	chr5	+	1362	1	Intergenic	novelGene_2604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67581144	67582506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_67581100_67582500
m54284U_201014_093907/29229702/ccs	chr9	+	2009	18	NNC	ENSMUSG00000003402.15	novel	2012	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_11	210.276996423559	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGCTGTTTTTTAAT	NA	False	NA	20	True	AATAAA	-16	NA	21914313	21925518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922972_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
m54284U_201014_093907/29229944/ccs	chr19	+	174	1	Intergenic	novelGene_9264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTGG	5049	False	NA	NA	False	NA	NA	NA	41986841	41987015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_41986800_41987000
m54284U_201014_093907/29297151/ccs	chr9	+	170	1	Intergenic	novelGene_5056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAGAAAATAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	104288776	104288946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_104288800_104288900
m54284U_201014_093907/29361886/ccs	chr12	-	173	1	Intergenic	novelGene_6739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAAAATAAAAT	7317	False	NA	NA	False	NA	NA	NA	76932769	76932596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_76932600_76932800
m54284U_201014_093907/29492701/ccs	chr2	+	534	2	Intergenic	novelGene_760	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATATTGATTGAGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	34956839	34958751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34957071_34958448
m54284U_201014_093907/29690647/ccs	chr8	+	186	1	Intergenic	novelGene_4529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTGTTAAGCCTGAC	9071	False	NA	NA	False	NA	NA	NA	117711265	117711451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_117711300_117711500
m54284U_201014_093907/29885630/ccs	chr5	-	173	1	FSM	ENSMUSG00000029202.13	ENSMUST00000201673.2	6051	1	-165	6043	-165	3494	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTTTTTTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	65769281	65769108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65769100_65769300
m54284U_201014_093907/29885669/ccs	chr11	-	174	1	Intergenic	novelGene_5858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACACAAAAAACAC	7025	False	NA	NA	False	NA	NA	NA	57500106	57499932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57499900_57500100
m54284U_201014_093907/30082112/ccs	chr10	-	162	1	Intergenic	novelGene_5527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAAAAAGGTC	NA	False	NA	NA	False	NA	NA	NA	105769830	105769668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_105769700_105769800
m54284U_201014_093907/30082918/ccs	chr10	+	181	1	Intergenic	novelGene_5267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGTCCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	40008674	40008855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_40008700_40008900
m54284U_201014_093907/3015797/ccs	chr13	-	181	1	Intergenic	novelGene_7102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTAAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	55497948	55497767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55497800_55497900
m54284U_201014_093907/30212106/ccs	chr9	+	191	1	Intergenic	novelGene_4636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTTCTAAGGCCTACTC	NA	False	NA	NA	False	NA	NA	NA	14310864	14311055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_14310900_14311100
m54284U_201014_093907/30278631/ccs	chrX	+	177	1	Intergenic	novelGene_9422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAC	2145	False	NA	NA	False	NA	NA	NA	36330575	36330752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_36330600_36330800
m54284U_201014_093907/30343326/ccs	chr6	+	173	1	Intergenic	novelGene_3560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTGTTAGA	NA	False	NA	NA	False	NA	NA	NA	137640401	137640574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_137640400_137640600
m54284U_201014_093907/30411184/ccs	chr11	+	228	1	Intergenic	novelGene_5948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTGCATATCTTTTTT	2951	False	NA	NA	False	NA	NA	NA	69594450	69594678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69594400_69594700
m54284U_201014_093907/30476813/ccs	chr11	+	167	1	Intergenic	novelGene_5779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTAAAAAAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	40748595	40748762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_40748600_40748800
m54284U_201014_093907/30607082/ccs	chr11	+	2872	15	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	178	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	61.3790913678498	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCCCTTCATTTAA	NA	False	NA	11	True	NA	NA	NA	29476407	29495457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_29476566_29476692_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
m54284U_201014_093907/30607705/ccs	chr6	+	196	1	Intergenic	novelGene_3099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGAATCACAG	NA	False	NA	NA	False	NA	NA	NA	3456257	3456453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_3456300_3456500
m54284U_201014_093907/30672535/ccs	chr5	+	157	1	Intergenic	novelGene_2498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATGAATAAATC	NA	False	NA	NA	False	NA	NA	NA	26403787	26403944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_26403800_26403900
m54284U_201014_093907/30802761/ccs	chr2	+	2639	1	Antisense	novelGene_ENSMUSG00000035399.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGTAAATTGTGACT	NA	False	NA	NA	False	NA	NA	NA	163252452	163255091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_163252500_163255100
m54284U_201014_093907/30804607/ccs	chr3	+	194	1	Intergenic	novelGene_1360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGTTAAGAATTTACAAA	NA	False	NA	NA	False	NA	NA	NA	21655382	21655576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_21655400_21655600
m54284U_201014_093907/31001069/ccs	chr1	+	166	1	Intergenic	novelGene_446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTTTTTAAAAAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	164973692	164973858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_164973700_164973900
m54284U_201014_093907/31064338/ccs	chr7	-	2113	5	NIC	ENSMUSG00000019370.11	novel	2290	6	NA	NA	-139	0	intron_retention	FALSE	canonical	2	12	junction_4	1046.48303856298	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGACTCTTCCGTCTG	NA	False	NA	-14	True	AATAAA	-15	NA	16657893	16649303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16657765
m54284U_201014_093907/31066464/ccs	chr5	+	175	1	Intergenic	novelGene_2724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	106871667	106871842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_106871700_106871800
m54284U_201014_093907/31195245/ccs	chr11	+	3269	11	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	24.4040980165217	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTATTGGTTTCCTA	NA	False	NA	35	True	AATAAA	-37	NA	75239320	75296531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
m54284U_201014_093907/31195739/ccs	chr17	+	2880	4	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1677	junction_2	116.645712403938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTTTTCCATTCATT	NA	False	NA	17	True	AATAAA	-18	NA	29709726	29715086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29710200_29710298_29711006_29712695_29712873_29713563
m54284U_201014_093907/31392509/ccs	chr10	-	163	1	Intergenic	novelGene_5204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTTTAAAATGTGAACAA	NA	False	NA	NA	False	NA	NA	NA	14136885	14136722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_14136700_14136900
m54284U_201014_093907/31524176/ccs	chr11	+	136	1	Intergenic	novelGene_5990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTTCCTTTTGATTTT	NA	False	NA	5	True	AATAAA	-24	NA	74619567	74619703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74619600_74619700
m54284U_201014_093907/31589724/ccs	chr5	+	200	1	Intergenic	novelGene_3013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGGGGCTGGAGTGAT	NA	False	NA	NA	False	NA	NA	NA	139936557	139936757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_139936600_139936800
m54284U_201014_093907/31785228/ccs	chr10	-	183	1	Intergenic	novelGene_5508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTAATCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94403150	94402967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_94403000_94403200
m54284U_201014_093907/3213001/ccs	chr13	-	193	1	Intergenic	novelGene_7050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTAGGCTACTGC	NA	False	NA	NA	False	NA	NA	NA	45033732	45033539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_45033500_45033700
m54284U_201014_093907/3213972/ccs	chrX	-	2830	16	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-126	-56486	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_15	131.654429811111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	59224575	59157804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941_59224048_59224496
m54284U_201014_093907/32375913/ccs	chr16	+	189	1	Intergenic	novelGene_8039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAGGAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	8398992	8399181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_8399000_8399200
m54284U_201014_093907/32441973/ccs	chr15	-	2568	3	NNC	ENSMUSG00000072568.5	novel	5565	2	NA	NA	169	-325	intron_retention	FALSE	canonical	3	5	junction_1	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCGCTTCCTCTTTACT	NA	False	NA	-4	True	AATAAA	-18	NA	60696760	60691167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_60692121_60694623_60695841_60696362
m54284U_201014_093907/32507803/ccs	chr6	+	174	1	Intergenic	novelGene_3143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATAGAAAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	29982803	29982977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29982800_29983000
m54284U_201014_093907/32637023/ccs	chr3	-	188	1	Intergenic	novelGene_1636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCCACTGCTTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	111372898	111372710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_111372700_111372900
m54284U_201014_093907/32703251/ccs	chr17	+	176	1	Intergenic	novelGene_8366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGATTT	6413	False	NA	NA	False	NA	NA	NA	13067518	13067694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_13067500_13067700
m54284U_201014_093907/32704531/ccs	chrX	+	169	1	Intergenic	novelGene_9366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAATATCTC	4768	False	NA	NA	False	NA	NA	NA	7779543	7779712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_7779500_7779700
m54284U_201014_093907/3278209/ccs	chr4	+	188	1	Intergenic	novelGene_2036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTAAAAGTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	116869612	116869800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116869600_116869800
m54284U_201014_093907/32900497/ccs	chr7	+	157	1	Intergenic	novelGene_3644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	7140716	7140873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_7140700_7140900
m54284U_201014_093907/329129/ccs	chr4	+	188	1	Intergenic	novelGene_2369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAATAGTCACATGAT	NA	False	NA	NA	False	NA	NA	NA	148511294	148511482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_148511300_148511500
m54284U_201014_093907/33031034/ccs	chr10	+	207	1	Intergenic	novelGene_5347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTACATAATTTTGGAGGA	NA	False	NA	NA	False	NA	NA	NA	62407717	62407924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62407700_62407900
m54284U_201014_093907/33032638/ccs	chrX	+	181	1	Intergenic	novelGene_9459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACACATATTATCAGAGC	NA	False	NA	NA	False	NA	NA	NA	51222438	51222619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_51222400_51222600
m54284U_201014_093907/33095805/ccs	chr11	+	191	1	Intergenic	novelGene_5795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTAAAAAAAGATTTATT	NA	False	NA	NA	False	NA	NA	NA	49576391	49576582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_49576400_49576600
m54284U_201014_093907/33164056/ccs	chr16	-	189	1	Intergenic	novelGene_8209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCAGCTGGGCAGTGGT	7781	False	NA	NA	False	NA	NA	NA	32137907	32137718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32137700_32137900
m54284U_201014_093907/33295161/ccs	chr2	+	3979	1	Antisense	novelGene_ENSMUSG00000026669.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACCAAACCCCCCAAAAC	4504	False	NA	NA	False	NA	NA	NA	4998975	5002954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_4999000_5003000
m54284U_201014_093907/33358102/ccs	chr9	+	184	1	Intergenic	novelGene_4871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAACTTATTTAATGAG	NA	False	NA	NA	False	NA	NA	NA	64620273	64620457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64620300_64620500
m54284U_201014_093907/33360559/ccs	chr7	+	187	1	Intergenic	novelGene_4068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCCTTTCTCCCTGAAG	8227	False	NA	NA	False	NA	NA	NA	122450234	122450421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_122450200_122450400
m54284U_201014_093907/33423377/ccs	chr11	-	161	1	Intergenic	novelGene_6491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	433	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAATTCAGCATCAA	NA	False	NA	-7	True	NA	NA	NA	117541384	117541223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_117541200_117541400
m54284U_201014_093907/33425338/ccs	chr1	-	3820	1	Intergenic	novelGene_115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	48780832	48777012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_48777000_48780800
m54284U_201014_093907/3345044/ccs	chr11	+	183	1	Intergenic	novelGene_6006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAGAGAAAGGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	75347022	75347205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75347000_75347200
m54284U_201014_093907/33489986/ccs	chr1	+	142	1	Intergenic	novelGene_278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	119699522	119699664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_119699500_119699700
m54284U_201014_093907/33491045/ccs	chr15	+	202	1	Intergenic	novelGene_7795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATCAGCCCCTACAAAC	NA	False	NA	NA	False	NA	NA	NA	77717120	77717322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_77717100_77717300
m54284U_201014_093907/33619998/ccs	chr1	-	185	1	Intergenic	novelGene_105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATGTGGGTTCATGTT	2801	False	NA	NA	False	NA	NA	NA	43931074	43930889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_43930900_43931100
m54284U_201014_093907/33620168/ccs	chr2	+	173	1	Intergenic	novelGene_1139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	154237380	154237553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154237400_154237600
m54284U_201014_093907/33622631/ccs	chr12	+	149	1	Intergenic	novelGene_6856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGCTACTAAAAGATAACA	NA	False	NA	NA	False	NA	NA	NA	101829147	101829296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_101829100_101829300
m54284U_201014_093907/34014694/ccs	chr11	-	1930	12	NIC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	77	0	combination_of_known_splicesites	TRUE	canonical	2	12	junction_10	744.815934885596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5278	False	NA	-9	True	AATAAA	-20	NA	88846214	88814845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88843231_88843381_88846119
m54284U_201014_093907/34210360/ccs	chr7	+	2474	1	NIC	ENSMUSG00000045467.14	novel	3010	15	NA	NA	10960	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGCTGTACCTCCTTTC	NA	False	NA	NA	False	ATTAAA	-20	NA	79908095	79910569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79908100_79910600
m54284U_201014_093907/34275937/ccs	chr15	-	176	1	Antisense	novelGene_ENSMUSG00000116238.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGCAGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	76462422	76462246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_76462200_76462400
m54284U_201014_093907/34341109/ccs	chr2	+	176	1	Intergenic	novelGene_1185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGTTGGGGAAGG	NA	False	NA	NA	False	NA	NA	NA	156925571	156925747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_156925600_156925700
m54284U_201014_093907/34342182/ccs	chr8	+	3347	1	Intergenic	novelGene_4192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGAACGTATCTGAG	NA	False	NA	NA	False	NA	NA	NA	4346460	4349807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_4346500_4349800
m54284U_201014_093907/34407884/ccs	chr7	+	188	1	Intergenic	novelGene_4159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAGCAGACAGGGCT	NA	False	NA	NA	False	NA	NA	NA	140665268	140665456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140665300_140665500
m54284U_201014_093907/34409072/ccs	chr11	+	7391	30	NIC	ENSMUSG00000020859.17	novel	7340	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_26	18.5369765764142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGAAGTCTAGTGTGGT	664	False	NA	9	True	TATAAA	-16	NA	93886916	94016911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004088_94004128_94004998_94005176_94007555_94007706_94013547
m54284U_201014_093907/34474781/ccs	chr9	-	240	1	Intergenic	novelGene_5126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCATCTATCCATGAGTGA	NA	False	NA	NA	False	AATAAA	-33	NA	114322574	114322334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_114322300_114322600
m54284U_201014_093907/34736061/ccs	chr6	+	4111	1	Intergenic	novelGene_3446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-39	NA	119765157	119769268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_119765200_119769300
m54284U_201014_093907/3474788/ccs	chr15	+	732	3	NNC	ENSMUSG00000023020.4	novel	2090	2	NA	NA	0	478	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	37.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTAGTGGTTCTGTG	NA	False	NA	20	True	ATTAAA	-15	NA	99623557	99625929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_99623730_99624452_99624609_99625525
m54284U_201014_093907/3476239/ccs	chr4	+	196	1	Intergenic	novelGene_2150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTCCCCCGGTGGTGA	1721	False	NA	NA	False	NA	NA	NA	129314297	129314493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129314300_129314500
m54284U_201014_093907/34997471/ccs	chr14	+	213	1	Intergenic	novelGene_7410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45074229	45074442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_45074200_45074400
m54284U_201014_093907/35258696/ccs	chr1	+	3002	1	Antisense	novelGene_ENSMUSG00000018417.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTTTGAGCTCTGCTGG	NA	False	NA	NA	False	NA	NA	NA	51838271	51841273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_51838300_51841300
m54284U_201014_093907/35260620/ccs	chr4	-	180	1	Intergenic	novelGene_2290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGTTTTTTTTTATG	8635	False	NA	NA	False	NA	NA	NA	139084416	139084236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_139084200_139084400
m54284U_201014_093907/35456014/ccs	chr2	+	330	1	Intergenic	novelGene_1290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTCAAAAACACCATATG	NA	False	NA	NA	False	NA	NA	NA	172493579	172493909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_172493600_172493900
m54284U_201014_093907/35457040/ccs	chr14	+	188	1	Intergenic	novelGene_7356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACTGCACAAACAGTAATC	NA	False	NA	NA	False	NA	NA	NA	24390103	24390291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_24390100_24390300
m54284U_201014_093907/35652817/ccs	chr11	+	180	1	Intergenic	novelGene_6336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATGATA	2093	False	NA	NA	False	NA	NA	NA	101372811	101372991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101372800_101373000
m54284U_201014_093907/35784798/ccs	chr2	+	3922	1	Intergenic	novelGene_773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTAACCTATCCTAATCAG	NA	False	NA	NA	False	ATTAAA	-31	NA	37964487	37968409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_37964500_37968400
m54284U_201014_093907/35913758/ccs	chr8	+	171	1	Genic_Genomic	ENSMUSG00000012705.17	novel	NA	NA	NA	NA	4200	30	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGGTCATCCTGGT	NA	False	NA	NA	False	NA	NA	NA	3709969	3710140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_+_3710000_3710100
m54284U_201014_093907/3606666/ccs	chr2	+	191	1	Intergenic	novelGene_624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGAAAGAAAGCCGGAT	2221	False	NA	NA	False	NA	NA	NA	22930780	22930971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_22930800_22931000
m54284U_201014_093907/36177988/ccs	chr6	+	2905	1	ISM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	24746	3462	19491	-3462	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGTCTTTTGACCATT	1118	False	NA	5	True	ATTAAA	-15	NA	67268353	67271258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_67268400_67271300
m54284U_201014_093907/36242153/ccs	chr4	+	172	1	Intergenic	novelGene_2439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTTTTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156102691	156102863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156102700_156102900
m54284U_201014_093907/36242650/ccs	chr9	+	756	1	FSM	ENSMUSG00000062933.8	ENSMUST00000075723.7	490	1	-42	-224	-42	224	mono-exon	FALSE	NA	NA	NA	NA	NA	5144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCACCTGACACAAACAC	NA	False	NA	NA	False	NA	NA	NA	96777668	96778424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_96777700_96778400
m54284U_201014_093907/36571804/ccs	chr14	+	157	1	Intergenic	novelGene_7419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	47142358	47142515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_47142400_47142500
m54284U_201014_093907/36634808/ccs	chr17	+	184	1	Intergenic	novelGene_8365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCCAGCTCAGTTCTAG	NA	False	NA	NA	False	NA	NA	NA	10571227	10571411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_10571200_10571400
m54284U_201014_093907/36832972/ccs	chr6	+	205	1	Intergenic	novelGene_3555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTAACTCCACACACTGG	NA	False	NA	NA	False	NA	NA	NA	136343648	136343853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_136343600_136343900
m54284U_201014_093907/36964825/ccs	chr2	+	3908	22	NIC	ENSMUSG00000027624.21	novel	8344	25	NA	NA	-200	857	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	46.1339860753633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAATTACCTGACTG	7441	False	NA	22	True	AATAAA	-32	NA	156262628	156382763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352655_156352802_156353704_156353741_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
m54284U_201014_093907/37355853/ccs	chr3	+	3301	10	NIC	ENSMUSG00000034544.18	novel	3213	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	108.773408151936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGACTGCTTCCTCCC	NA	False	NA	16	True	AATAAA	-16	NA	66893310	67265729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_66893522_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
m54284U_201014_093907/3736588/ccs	chr4	-	253	1	Intergenic	novelGene_1972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTCTAGGGCACAAGG	NA	False	NA	NA	False	NA	NA	NA	106186671	106186418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_106186400_106186700
m54284U_201014_093907/37422755/ccs	chr1	-	177	1	Intergenic	novelGene_285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	126225593	126225416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_126225400_126225600
m54284U_201014_093907/37487069/ccs	chr9	+	2281	1	Genic_Genomic	ENSMUSG00000031993.8	novel	NA	NA	NA	NA	-27	-35312	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATTAAATAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	30338376	30340657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_30338400_30340700
m54284U_201014_093907/37488034/ccs	chr11	+	2396	1	Intergenic	novelGene_5661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4337466	4339862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4337500_4339900
m54284U_201014_093907/37552548/ccs	chr4	+	191	1	Intergenic	novelGene_2155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATCTTGAAGGTTTCCC	436	False	NA	NA	False	NA	NA	NA	129474512	129474703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129474500_129474700
m54284U_201014_093907/37554236/ccs	chr6	-	202	1	Intergenic	novelGene_3503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCTAAGAACACTGGTT	3983	False	NA	NA	False	NA	NA	NA	124916123	124915921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_124915900_124916100
m54284U_201014_093907/37618149/ccs	chr4	+	177	1	Intergenic	novelGene_1965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103336131	103336308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_103336100_103336300
m54284U_201014_093907/37880205/ccs	chr11	+	176	1	Intergenic	novelGene_6418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAAGTGATTTTCCG	8991	False	NA	NA	False	NA	NA	NA	107347028	107347204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107347000_107347200
m54284U_201014_093907/37881955/ccs	chr16	-	2892	6	NNC	ENSMUSG00000047714.15	novel	4078	6	NA	NA	56	-1125	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	405.029184133687	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCTGATTCTTCGTG	NA	False	NA	NA	False	AAAAAG	-8	NA	31094039	31071479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_31073552_31077154_31077318_31079391_31079487_31080047_31080126_31084122_31084231_31093663
m54284U_201014_093907/38011057/ccs	chr14	-	6118	4	NIC	ENSMUSG00000022124.16	novel	3352	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	110	junction_3	37.4165738677394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9922	False	NA	-4	True	AATAAA	-13	NA	103336435	103318469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_103320947_103326737_103326910_103329739_103332978_103336204
m54284U_201014_093907/3801766/ccs	chr16	+	1906	1	Antisense	novelGene_ENSMUSG00000060657.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	13953966	13955872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_+_13954000_13955900
m54284U_201014_093907/38077413/ccs	chr11	+	4856	31	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	25.7846853771769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGTGGATCCATGAA	NA	False	NA	15	True	ATTAAA	-23	NA	115656268	115689859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115656380_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
m54284U_201014_093907/38077561/ccs	chr14	+	2373	23	NIC	ENSMUSG00000041650.16	novel	2592	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_16	27.256245019481	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTTTTC	NA	False	NA	16	True	AATAAA	-19	NA	122771742	123127240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
m54284U_201014_093907/38273074/ccs	chr11	+	2122	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	42	junction_10	358.844635214493	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455259	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469620_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
m54284U_201014_093907/38275272/ccs	chr11	+	2304	1	Intergenic	novelGene_6133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGTTATTAACAAAATGC	NA	False	NA	NA	False	NA	NA	NA	84761704	84764008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_84761700_84764000
m54284U_201014_093907/38471371/ccs	chr7	+	181	1	Intergenic	novelGene_3683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAAAAACG	NA	False	NA	NA	False	NA	NA	NA	19015886	19016067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_19015900_19016100
m54284U_201014_093907/38536427/ccs	chr9	+	199	1	Intergenic	novelGene_4875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAAAGAGTTGGT	NA	False	NA	NA	False	NA	NA	NA	64865733	64865932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64865700_64865900
m54284U_201014_093907/38603475/ccs	chr2	+	2806	15	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_14	395.179964170291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405168	27426547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768_27425445_27425528
m54284U_201014_093907/38800059/ccs	chr11	+	186	1	Intergenic	novelGene_6394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACTTCAGACTAATTTC	NA	False	NA	NA	False	NA	NA	NA	106640625	106640811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106640600_106640800
m54284U_201014_093907/38930539/ccs	chr15	-	215	1	Intergenic	novelGene_7901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTCAATATACCTATAA	NA	False	NA	NA	False	AATGAA	-7	NA	88671077	88670862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_88670900_88671100
m54284U_201014_093907/38931064/ccs	chr1	+	4883	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_16	563.051968516922	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGGTTCATCCTGCA	NA	False	NA	22	True	AATAAA	-24	NA	185095254	185160557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131427_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
m54284U_201014_093907/39126275/ccs	chr12	+	176	1	Intergenic	novelGene_6579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGTGAGCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	17681577	17681753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_17681600_17681800
m54284U_201014_093907/39256383/ccs	chr4	-	178	1	Intergenic	novelGene_2424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAACAGC	3386	False	NA	NA	False	NA	NA	NA	155394683	155394505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155394500_155394700
m54284U_201014_093907/39257262/ccs	chr12	+	212	1	Intergenic	novelGene_6779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	82500005	82500217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_82500000_82500200
m54284U_201014_093907/39258328/ccs	chr9	-	1325	4	NIC	ENSMUSG00000025894.12	novel	2519	5	NA	NA	0	-1002	combination_of_known_splicesites	FALSE	canonical	3	71	junction_3	376.029549666276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTAAGTCTGTCGTC	-3	True	NA	33	True	AGTAAA	-12	NA	4309471	4295966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4309253
m54284U_201014_093907/39258450/ccs	chr7	+	225	1	Intergenic	novelGene_3952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCACAAATACATTTG	NA	False	NA	NA	False	NA	NA	NA	96402220	96402445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_96402200_96402400
m54284U_201014_093907/39388062/ccs	chr6	-	3045	12	NNC	ENSMUSG00000055799.14	novel	3042	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	125.048618644083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	4823	False	NA	-8	True	AATAAA	-14	NA	72766237	72603360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610305_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
m54284U_201014_093907/39388922/ccs	chr7	-	2425	12	NIC	ENSMUSG00000025512.16	novel	4222	13	NA	NA	0	78	intron_retention	FALSE	canonical	3	145	junction_11	23.7190860136371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGAGACAGCTGCTATG	NA	False	NA	-6	True	AATATA	-17	NA	141119745	141075882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141109615_141110062_141110213_141112731_141112887_141119685
m54284U_201014_093907/39389529/ccs	chr14	+	2699	1	Intergenic	novelGene_7521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACTTGGAAGAATCAATAA	3481	False	NA	NA	False	NA	NA	NA	67241207	67243906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_67241200_67243900
m54284U_201014_093907/39389637/ccs	chrX	+	176	1	Intergenic	novelGene_9444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	47351941	47352117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_47351900_47352100
m54284U_201014_093907/39453500/ccs	chr8	-	174	2	Antisense	novelGene_ENSMUSG00000047654.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	171	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAAGTGCTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	70459371	70206023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_70206150_70459323
m54284U_201014_093907/39583757/ccs	chr5	+	2950	1	Genic_Genomic	ENSMUSG00000106968.2	novel	NA	NA	NA	NA	0	954	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGAATCTGTTTCCTT	NA	False	NA	NA	False	ACTAAA	-16	NA	74103723	74106673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_+_74103700_74106700
m54284U_201014_093907/39780772/ccs	chr4	-	325	1	Intergenic	novelGene_1952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTTTTTTTCCCCAAT	NA	False	NA	NA	False	NA	NA	NA	100630597	100630272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_100630300_100630600
m54284U_201014_093907/39912973/ccs	chr1	+	195	1	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAAAATCACAAGCCGG	NA	False	NA	NA	False	NA	NA	NA	4942372	4942567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_4942400_4942600
m54284U_201014_093907/40306646/ccs	chr10	+	3819	11	Intergenic	novelGene_5576	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_10	35.5747101182849	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGCCCATATTTAATT	NA	False	NA	NA	False	AATAAA	-36	NA	120359230	120378833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120376179
m54284U_201014_093907/40307404/ccs	chr1	+	1128	3	ISM	ENSMUSG00000033227.8	ENSMUST00000006716.8	2071	4	10378	444	-169	276	3prime_fragment	FALSE	canonical	1	2	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATATTCCTCAGAATT	4358	False	NA	NA	False	AATAAA	-23	NA	74821428	74824037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_74821482_74821718_74822054_74823297
m54284U_201014_093907/40438183/ccs	chr7	+	196	1	Intergenic	novelGene_3999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGCACGAGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	105167805	105168001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_105167800_105168000
m54284U_201014_093907/40633181/ccs	chr1	-	132	1	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTTGTCTTGGTTCCAT	NA	False	NA	NA	False	NA	NA	NA	7200208	7200076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_7200100_7200200
m54284U_201014_093907/40634810/ccs	chr1	+	2491	1	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAACAAAAAAAAAA	1746	False	NA	NA	False	NA	NA	NA	36693308	36695799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36693300_36695800
m54284U_201014_093907/4065878/ccs	chr10	+	174	1	Intergenic	novelGene_5366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTGAAGCTGGCACG	NA	False	NA	NA	False	NA	NA	NA	63298476	63298650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_63298500_63298600
m54284U_201014_093907/40699324/ccs	chr1	+	4402	13	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	161	junction_1	119.058896489651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTCTCTATGAATCCA	NA	False	NA	56	True	TTTAAA	-6	NA	171975684	172023074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172016637_172020084_172020205_172021351_172021469_172022122
m54284U_201014_093907/40829113/ccs	chr4	+	179	1	Intergenic	novelGene_2100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAGAATTACAG	NA	False	NA	NA	False	NA	NA	NA	124607865	124608044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_124607900_124608000
m54284U_201014_093907/40829115/ccs	chr13	-	179	1	Intergenic	novelGene_7211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75003348	75003169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_75003200_75003300
m54284U_201014_093907/40829744/ccs	chr11	-	7201	40	NNC	ENSMUSG00000018474.19	novel	7261	40	NA	NA	-4281	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_35	13.3261815138831	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	False	NA	-11	True	TATAAA	-16	NA	69264513	69234098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_69235305_69235961_69236089_69236296_69236461_69237397_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252051_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69264330
m54284U_201014_093907/41093538/ccs	chr3	+	183	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	337	-76	337	76	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTAGTACCTATTTA	NA	False	NA	NA	False	NA	NA	NA	24387568	24387751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_24387600_24387800
m54284U_201014_093907/41222351/ccs	chr9	+	2015	1	FSM	ENSMUSG00000079884.7	ENSMUST00000182663.3	604	1	-87	-1324	-87	1324	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCAGACATAGGATTCA	NA	False	NA	NA	False	AATAAA	-44	NA	33639455	33641470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_33639500_33641500
m54284U_201014_093907/41222554/ccs	chr11	-	190	1	Intergenic	novelGene_6119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGCAGGCTTCTGATC	NA	False	NA	NA	False	NA	NA	NA	82591646	82591456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_82591500_82591600
m54284U_201014_093907/41224818/ccs	chr7	-	3628	15	NIC	ENSMUSG00000048170.15	novel	4237	16	NA	NA	0	-523	intron_retention	FALSE	canonical	2	4	junction_14	146.056950033407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTGTCCTAGAACAA	3862	False	NA	0	True	AATAAA	-28	NA	128342219	128298687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128341856
m54284U_201014_093907/41353622/ccs	chr11	+	177	1	Intergenic	novelGene_5868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGTAGATAATAAATTT	1693	False	NA	NA	False	NA	NA	NA	58980108	58980285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_58980100_58980300
m54284U_201014_093907/41551969/ccs	chr6	-	5052	12	NIC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	36.6012690020713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGTGCTTAAAACGT	NA	False	NA	1	True	ATTAAA	-24	NA	92191830	92163692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_92167234_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
m54284U_201014_093907/41616400/ccs	chr8	-	144	1	Intergenic	novelGene_4382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATCTTTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85841972	85841828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_85841800_85842000
m54284U_201014_093907/41617180/ccs	chr5	+	153	1	Intergenic	novelGene_2779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAGAAGGCTCA	1884	False	NA	NA	False	NA	NA	NA	113737900	113738053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_113737900_113738100
m54284U_201014_093907/41683450/ccs	chr14	+	187	1	Intergenic	novelGene_7547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGGATCAGTCAATTC	NA	False	NA	NA	False	NA	NA	NA	76375687	76375874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_76375700_76375900
m54284U_201014_093907/41812258/ccs	chr10	-	3069	9	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	134.311903791138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047454	127032935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_127035014_127035181_127035286_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
m54284U_201014_093907/41879133/ccs	chr10	+	4132	8	NIC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	116	junction_1	25.8330590286073	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	8	True	AATAAA	-19	NA	61551089	61574432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61571438_61572361
m54284U_201014_093907/41943969/ccs	chr11	+	191	1	Intergenic	novelGene_6009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTACTTATTTTATGT	NA	False	NA	NA	False	NA	NA	NA	75369386	75369577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75369400_75369600
m54284U_201014_093907/4195475/ccs	chr3	+	179	1	Intergenic	novelGene_1582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATAATTTTGTG	2841	False	NA	NA	False	NA	NA	NA	96198273	96198452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_96198300_96198500
m54284U_201014_093907/42076826/ccs	chr8	+	178	1	Intergenic	novelGene_4500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGACATTAGCATT	NA	False	NA	NA	False	NA	NA	NA	111968883	111969061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111968900_111969100
m54284U_201014_093907/42140443/ccs	chr19	+	190	1	Intergenic	novelGene_9146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGGAGCCCGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	7476520	7476710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_7476500_7476700
m54284U_201014_093907/42403686/ccs	chr1	-	4133	22	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_13	44.0561381723092	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168743	38091866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
m54284U_201014_093907/42470100/ccs	chr5	+	182	1	Intergenic	novelGene_2950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCAACTTCCATTTCTT	NA	False	NA	NA	False	NA	NA	NA	130020553	130020735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_130020600_130020700
m54284U_201014_093907/42533218/ccs	chr6	-	7142	41	NNC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_37	92.3015133949601	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093811	90990049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91002341_91003740_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91065862_91065968_91066816_91066914_91075547_91075680_91078244_91078382_91093599
m54284U_201014_093907/4260535/ccs	chr17	+	172	1	Intergenic	novelGene_8449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	27439155	27439327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27439200_27439300
m54284U_201014_093907/4262488/ccs	chr8	-	1836	12	NIC	ENSMUSG00000046707.10	novel	3773	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	88.3077825721489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGATGGAGCGTATTTA	NA	False	NA	-6	True	AATAAA	-13	NA	96215455	96174601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96215030
m54284U_201014_093907/42666786/ccs	chr7	+	171	1	Intergenic	novelGene_3729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAAACAA	NA	False	NA	NA	False	NA	NA	NA	27288548	27288719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_27288500_27288700
m54284U_201014_093907/43124086/ccs	chr7	-	4046	25	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	875	junction_24	150.580520172948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198273	44182172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
m54284U_201014_093907/43255373/ccs	chrX	+	1283	1	Intergenic	novelGene_9693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156344991	156346274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_156345000_156346300
m54284U_201014_093907/4325878/ccs	chr18	-	422	1	Intergenic	novelGene_8817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCCGTTTCTTGTG	NA	False	NA	NA	False	NA	NA	NA	12292564	12292142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_12292100_12292600
m54284U_201014_093907/43778875/ccs	chr9	-	194	1	Intergenic	novelGene_4850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGGTGATCTATTTAC	NA	False	NA	NA	False	NA	NA	NA	62836060	62835866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_62835900_62836100
m54284U_201014_093907/44042785/ccs	chr6	+	191	1	Intergenic	novelGene_3451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTTTTTTTTTAGCT	NA	False	NA	NA	False	AATAAA	-9	NA	120055445	120055636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120055400_120055600
m54284U_201014_093907/44501689/ccs	chr13	+	149	1	Intergenic	novelGene_6956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGGGGGAACCCTT	NA	False	NA	NA	False	NA	NA	NA	9058691	9058840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_9058700_9058800
m54284U_201014_093907/44566539/ccs	chr2	-	2022	7	NIC	ENSMUSG00000052406.15	novel	2278	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	59.1629106789042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854336	26843577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850614_26850753_26852394_26852736_26854063
m54284U_201014_093907/4457713/ccs	chr9	+	1878	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	158.714356356255	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8647	False	NA	21	True	GATAAA	-13	NA	21176601	21185041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179791_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
m54284U_201014_093907/44630939/ccs	chr8	-	1829	14	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	76.1652672088405	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578640	106571304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572796_106572854_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
m54284U_201014_093907/44695997/ccs	chr9	+	175	1	Intergenic	novelGene_5101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAATAGGA	NA	False	NA	NA	False	NA	NA	NA	109808418	109808593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_109808400_109808600
m54284U_201014_093907/44960087/ccs	chr7	-	2095	1	Antisense	novelGene_ENSMUSG00000030472.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCAGCACACTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	43296521	43294426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_43294400_43296500
m54284U_201014_093907/45023372/ccs	chr5	-	195	1	Intergenic	novelGene_2821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGGCTGCTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	117471662	117471467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_117471500_117471700
m54284U_201014_093907/45025474/ccs	chr18	+	1262	1	Intergenic	novelGene_8820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGCACTCTAGACTTG	NA	False	NA	NA	False	NA	NA	NA	14754872	14756134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_14754900_14756100
m54284U_201014_093907/4522966/ccs	chr7	+	174	1	Intergenic	novelGene_3719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATCATCAAAGAAA	NA	False	NA	9	True	NA	NA	NA	26995024	26995198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_26995000_26995200
m54284U_201014_093907/4524791/ccs	chr10	+	195	1	Intergenic	novelGene_5538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATAGCTCTGTGTTGAT	4289	False	NA	NA	False	NA	NA	NA	111489641	111489836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_111489600_111489800
m54284U_201014_093907/45418280/ccs	chr15	-	191	1	Intergenic	novelGene_7726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGTTCACATTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	57899460	57899269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_57899300_57899500
m54284U_201014_093907/45418639/ccs	chr11	+	185	1	Intergenic	novelGene_6255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCCAGGGACAGCCTTG	699	False	NA	NA	False	NA	NA	NA	96747789	96747974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_96747800_96748000
m54284U_201014_093907/45812331/ccs	chr1	+	193	1	Intergenic	novelGene_321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGACAAGACACACCTG	5328	False	NA	NA	False	NA	NA	NA	133261462	133261655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_133261500_133261700
m54284U_201014_093907/45941368/ccs	chr16	-	175	1	Intergenic	novelGene_8048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGACTATATTTTC	NA	False	NA	NA	False	NA	NA	NA	8642201	8642026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_8642000_8642200
m54284U_201014_093907/460221/ccs	chr11	-	225	1	Intergenic	novelGene_6265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTAAACTTTTAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	97094917	97094692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97094700_97094900
m54284U_201014_093907/46072783/ccs	chr17	-	4431	6	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	247	junction_5	1877.06990812809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	4530	False	NA	NA	False	AATAAA	-14	NA	25492574	25480889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25492455
m54284U_201014_093907/46074497/ccs	chr5	-	1071	7	ISM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	0	23035	0	12571	5prime_fragment	FALSE	canonical	3	39	junction_2	4.14996653266291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGCCAGGCATGCTCTG	NA	False	NA	NA	False	NA	NA	NA	31854971	31804817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
m54284U_201014_093907/46139678/ccs	chr7	+	186	1	Intergenic	novelGene_4082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTGGTAAAATGCACAAA	NA	False	NA	NA	False	NA	NA	NA	125948379	125948565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_125948400_125948600
m54284U_201014_093907/461400/ccs	chr1	+	185	1	Intergenic	novelGene_445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGATGGCAGGCA	NA	False	NA	NA	False	NA	NA	NA	164732312	164732497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_164732300_164732500
m54284U_201014_093907/461619/ccs	chr19	+	2798	6	NIC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	0	1413	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	45.5042855124657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTGTGAACTCAGAAC	NA	False	NA	NA	False	AATAAA	-20	NA	55304726	55436824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55434609
m54284U_201014_093907/46334375/ccs	chr3	-	194	1	Intergenic	novelGene_1723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTGTGAGGCTTTGCA	NA	False	NA	NA	False	NA	NA	NA	153636412	153636218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_153636200_153636400
m54284U_201014_093907/46400881/ccs	chr13	+	178	1	Intergenic	novelGene_7015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATTGCCAATGTTA	126	False	NA	NA	False	NA	NA	NA	34924572	34924750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_34924600_34924800
m54284U_201014_093907/4654121/ccs	chr7	+	193	1	Intergenic	novelGene_3742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATATTTTTTTAAAAAAG	4598	False	NA	NA	False	NA	NA	NA	28192180	28192373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28192200_28192400
m54284U_201014_093907/46597526/ccs	chr9	+	1121	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	204.273305483936	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661854	109672042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_109661957_109662263_109662364_109664390_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
m54284U_201014_093907/46794307/ccs	chr12	+	2054	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	-51	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	1987.96093187635	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758239	24764094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759411_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
m54284U_201014_093907/46923847/ccs	chr10	+	173	1	Intergenic	novelGene_5593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAGGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	126712005	126712178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_126712000_126712200
m54284U_201014_093907/46990475/ccs	chr2	+	184	1	Intergenic	novelGene_1034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAATAAAGATAGATT	NA	False	NA	NA	False	NA	NA	NA	121771446	121771630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121771400_121771600
m54284U_201014_093907/46992064/ccs	chr8	-	1352	8	NIC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	559.57553155066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564889	95549188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95559142_95559329_95564879
m54284U_201014_093907/4718898/ccs	chrX	+	181	1	Intergenic	novelGene_9547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTAACGAGTTCAGGTT	NA	False	NA	NA	False	NA	NA	NA	97813225	97813406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_97813200_97813400
m54284U_201014_093907/4719332/ccs	chr7	-	149	1	Intergenic	novelGene_4097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAACAAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	126886738	126886589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_126886600_126886700
m54284U_201014_093907/47385039/ccs	chr2	+	173	1	Intergenic	novelGene_915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAATTTCTTTTTTTTTTT	7567	False	NA	NA	False	NA	NA	NA	90587059	90587232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_90587100_90587200
m54284U_201014_093907/47448088/ccs	chr17	-	2735	19	NNC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_9	74.801403730144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891585	56869948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874019_56874532_56874625_56875894_56876023_56878204_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
m54284U_201014_093907/47775865/ccs	chr5	+	188	1	Intergenic	novelGene_2599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAATTAAAAAAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	66394133	66394321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_66394100_66394300
m54284U_201014_093907/47777697/ccs	chr13	+	4628	1	Antisense	novelGene_ENSMUSG00000021311.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAGACAGAAGGATTGCT	NA	False	NA	NA	False	NA	NA	NA	12245345	12249973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_+_12245300_12250000
m54284U_201014_093907/47844002/ccs	chr11	+	186	1	Intergenic	novelGene_5660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACTCCAAGAGGAGAAC	9045	False	NA	NA	False	NA	NA	NA	4325207	4325393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4325200_4325400
m54284U_201014_093907/48103742/ccs	chr4	+	206	1	Intergenic	novelGene_2273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAGATAAATA	8726	False	NA	NA	False	NA	NA	NA	137397425	137397631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_137397400_137397600
m54284U_201014_093907/48104252/ccs	chr4	-	167	1	Intergenic	novelGene_2049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTCTCTTTCTTTCTT	8486	False	NA	NA	False	NA	NA	NA	117918279	117918112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_117918100_117918300
m54284U_201014_093907/48235013/ccs	chr2	-	202	1	Intergenic	novelGene_1197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGATGTTTGTTTGTCT	NA	False	NA	NA	False	TTTAAA	-3	NA	158008332	158008130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_158008100_158008300
m54284U_201014_093907/4849945/ccs	chr9	+	3792	21	NIC	ENSMUSG00000033335.18	novel	1772	12	NA	NA	-300	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	180.899585405827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	48	False	NA	20	True	AATAAA	-30	NA	21368102	21418436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21368708_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
m54284U_201014_093907/48564578/ccs	chr11	+	155	1	Intergenic	novelGene_6513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTCTTTTTTGTG	1754	False	NA	NA	False	NA	NA	NA	120459874	120460029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120459900_120460000
m54284U_201014_093907/48629903/ccs	chr10	+	154	1	Intergenic	novelGene_5584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTATTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	121344166	121344320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_121344200_121344300
m54284U_201014_093907/48693820/ccs	chr14	+	136	1	Intergenic	novelGene_7452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAAAACAAAAAC	10	False	NA	NA	False	NA	NA	NA	54467977	54468113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54468000_54468100
m54284U_201014_093907/48760029/ccs	chr17	+	6887	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	48.2350608349362	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9390	False	NA	15	True	NA	NA	NA	36152567	36170562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169469_36169838
m54284U_201014_093907/48825390/ccs	chr13	+	202	1	Intergenic	novelGene_6993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGATGTCCAATCAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	22894441	22894643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_22894400_22894600
m54284U_201014_093907/48825587/ccs	chr2	+	174	1	Intergenic	novelGene_869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGTTCTCAACTT	NA	False	NA	2	True	NA	NA	NA	75432787	75432961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_75432800_75433000
m54284U_201014_093907/48958209/ccs	chr9	+	183	1	Intergenic	novelGene_4881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCACTACCACTCCCAC	NA	False	NA	NA	False	NA	NA	NA	65478745	65478928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_65478700_65478900
m54284U_201014_093907/49152190/ccs	chr11	+	186	1	Intergenic	novelGene_5834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGTTAATTTTAATTA	NA	False	NA	NA	False	NA	NA	NA	53254885	53255071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53254900_53255100
m54284U_201014_093907/49348683/ccs	chr8	+	168	1	Intergenic	novelGene_4284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAAGTCAATTG	NA	False	NA	NA	False	NA	NA	NA	46613261	46613429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_46613300_46613400
m54284U_201014_093907/49350324/ccs	chr16	+	199	1	Intergenic	novelGene_8285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTTTGAGAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	55897827	55898026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_55897800_55898000
m54284U_201014_093907/49351015/ccs	chr4	-	176	1	Intergenic	novelGene_2068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAATGCAGTGGAT	NA	False	NA	NA	False	NA	NA	NA	120205193	120205017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_120205000_120205200
m54284U_201014_093907/49416819/ccs	chr2	+	157	1	Intergenic	novelGene_608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAAAATTTTAA	NA	False	NA	NA	False	NA	NA	NA	18349006	18349163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_18349000_18349200
m54284U_201014_093907/49611077/ccs	chrX	-	206	1	Intergenic	novelGene_9406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGGCACTTTTAAGT	NA	False	NA	NA	False	NA	NA	NA	20519458	20519252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_20519300_20519500
m54284U_201014_093907/49612507/ccs	chr18	+	163	1	Intergenic	novelGene_8880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAGCAAGTTGG	5705	False	NA	NA	False	NA	NA	NA	35136349	35136512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35136300_35136500
m54284U_201014_093907/49807793/ccs	chr1	+	192	1	Intergenic	novelGene_550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTTCAGGGGCCAGGG	NA	False	NA	NA	False	NA	NA	NA	191023277	191023469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_191023300_191023500
m54284U_201014_093907/49938996/ccs	chr12	+	156	1	Intergenic	novelGene_6716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTCCCCAGCACCGGA	NA	False	NA	NA	False	NA	NA	NA	73143172	73143328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_73143200_73143300
m54284U_201014_093907/50135206/ccs	chr5	-	182	1	Intergenic	novelGene_3048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGGGGTTATTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	143432339	143432157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_143432200_143432300
m54284U_201014_093907/50201418/ccs	chr2	+	186	1	Intergenic	novelGene_638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTTAAAACTTTTT	NA	False	NA	NA	False	NA	NA	NA	25445573	25445759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_25445600_25445800
m54284U_201014_093907/50203258/ccs	chr10	-	177	1	Intergenic	novelGene_5539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAGAAGAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	111775606	111775429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_111775400_111775600
m54284U_201014_093907/50268084/ccs	chr12	+	168	1	Intergenic	novelGene_6629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTTTTAAAATAAAAAT	NA	False	NA	NA	False	NA	NA	NA	51859637	51859805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_51859600_51859800
m54284U_201014_093907/50399908/ccs	chr18	+	2787	1	NIC	ENSMUSG00000043991.6	novel	5957	2	NA	NA	5837	-2815	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCTTTGAGTGAAGAGAA	NA	False	NA	19	True	ATTAAA	-15	NA	36419986	36422773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_36420000_36422800
m54284U_201014_093907/5046369/ccs	chr7	+	3014	1	Antisense	novelGene_ENSMUSG00000069727.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTCCAGGCCCAGAAAC	NA	False	NA	NA	False	AATACA	-42	NA	42334754	42337768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_42334800_42337800
m54284U_201014_093907/5048537/ccs	chr13	+	176	1	Intergenic	novelGene_7152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAATCAGACACA	NA	False	NA	NA	False	NA	NA	NA	62987509	62987685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62987500_62987700
m54284U_201014_093907/5048863/ccs	chr1	-	182	1	Intergenic	novelGene_415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAATGCTAATTTCTG	NA	False	NA	NA	False	NA	NA	NA	156571222	156571040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_156571000_156571200
m54284U_201014_093907/50530360/ccs	chr17	+	225	1	Intergenic	novelGene_8350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	6463282	6463507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_6463300_6463500
m54284U_201014_093907/50856988/ccs	chr1	+	178	1	Intergenic	novelGene_451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAGTTCTTTAGA	NA	False	NA	NA	False	NA	NA	NA	165612862	165613040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_165612900_165613000
m54284U_201014_093907/50923138/ccs	chr1	+	494	5	NNC	ENSMUSG00000073702.12	novel	487	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	5012.72253246676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTTTGGTTTTCCTT	NA	False	NA	26	True	AATAAA	-15	NA	39407009	39410447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_39407093_39407229_39407337_39409094_39409221_39410034_39410148_39410382
m54284U_201014_093907/50924217/ccs	chr5	-	3348	6	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1095	junction_1	142.186356588809	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650206	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24648142_24648274_24648455_24648892
m54284U_201014_093907/51120876/ccs	chr2	+	183	1	Intergenic	novelGene_919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCCTCATTGTTGTTA	NA	False	NA	NA	False	NA	NA	NA	90668535	90668718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_90668500_90668700
m54284U_201014_093907/5112305/ccs	chr11	+	190	1	Intergenic	novelGene_6043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGCTACTCCAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	77280604	77280794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77280600_77280800
m54284U_201014_093907/51250721/ccs	chr16	-	218	1	Intergenic	novelGene_8140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGGTTCTTGTTTAAG	7777	False	NA	NA	False	AAAAAG	-14	NA	20309026	20308808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20308800_20309000
m54284U_201014_093907/51315381/ccs	chr2	+	174	1	Intergenic	novelGene_792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAAGTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	52542165	52542339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_52542200_52542300
m54284U_201014_093907/51708400/ccs	chr19	+	1576	10	NIC	ENSMUSG00000024786.10	novel	1562	11	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	4.54062594260057	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTGCCCTGAGGTTTA	7986	False	NA	10	True	AATAAA	-26	NA	6234365	6274255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6234613_6256247_6256294_6261633_6261710_6262157_6262284_6263026_6263059_6263328_6263427_6265175_6265240_6271702_6271776_6272677_6272787_6273550
m54284U_201014_093907/51839344/ccs	chr2	+	2356	14	NNC	ENSMUSG00000000194.14	novel	6134	18	NA	NA	0	-1633	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_13	125.749539742944	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	31042327	31080492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31079438
m54284U_201014_093907/51907256/ccs	chr4	+	311	1	Intergenic	novelGene_2084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATGAGTTGCGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	123152127	123152438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_123152100_123152400
m54284U_201014_093907/51971948/ccs	chr2	+	1398	3	NNC	ENSMUSG00000027655.15	novel	3212	21	NA	NA	-934	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	52	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTCTCCTGTCTGTGG	NA	False	NA	28	True	AGTAAA	-19	NA	158691614	158700134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_158691766_158693630_158693743_158698999
m54284U_201014_093907/52102421/ccs	chr4	+	200	1	Intergenic	novelGene_2364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACATTCTTAGTCAT	9524	False	NA	NA	False	NA	NA	NA	147878387	147878587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_147878400_147878600
m54284U_201014_093907/52365664/ccs	chr5	-	181	1	Intergenic	novelGene_3040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAAAATAAAAAAAGGGG	5375	False	NA	NA	False	NA	NA	NA	142923732	142923551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142923600_142923700
m54284U_201014_093907/52562597/ccs	chr3	+	176	1	Intergenic	novelGene_1523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAGTTAATAATGAT	NA	False	NA	NA	False	NA	NA	NA	89602308	89602484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89602300_89602500
m54284U_201014_093907/52627124/ccs	chr15	-	2533	1	Intergenic	novelGene_7913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	94835635	94833102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_94833100_94835600
m54284U_201014_093907/52887725/ccs	chr8	-	178	1	Intergenic	novelGene_4575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGGTGATTGGACCCG	2406	False	NA	NA	False	NA	NA	NA	123791514	123791336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_123791300_123791500
m54284U_201014_093907/53020545/ccs	chr10	+	187	1	Intergenic	novelGene_5278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTTCTTATACTTCT	NA	False	NA	NA	False	NA	NA	NA	41573792	41573979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_41573800_41574000
m54284U_201014_093907/53086096/ccs	chr7	+	179	1	Intergenic	novelGene_3665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGAAGGTGTA	NA	False	NA	NA	False	NA	NA	NA	15625594	15625773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_15625600_15625800
m54284U_201014_093907/53086672/ccs	chr15	+	360	1	Intergenic	novelGene_8001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTAGTTGGTTGGCAG	8636	False	NA	NA	False	NA	NA	NA	102233351	102233711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_102233400_102233700
m54284U_201014_093907/5309540/ccs	chr7	-	179	1	Intergenic	novelGene_3820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTGAGACAAGATCTC	NA	False	NA	5	True	NA	NA	NA	42933763	42933584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_42933600_42933800
m54284U_201014_093907/53215641/ccs	chr11	+	143	1	Intergenic	novelGene_6282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	97649171	97649314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97649200_97649300
m54284U_201014_093907/53216889/ccs	chr7	+	219	1	Intergenic	novelGene_3803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTTATTTTATGGGTA	NA	False	NA	NA	False	TTTAAA	-14	NA	41150702	41150921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_41150700_41150900
m54284U_201014_093907/53478454/ccs	chr13	-	194	1	Intergenic	novelGene_7036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCCTTGCTTGTATTAT	1701	False	NA	NA	False	NA	NA	NA	43479784	43479590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_43479600_43479800
m54284U_201014_093907/53741111/ccs	chr17	+	165	1	Intergenic	novelGene_8633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATCTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47913910	47914075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47913900_47914100
m54284U_201014_093907/53741506/ccs	chr16	-	182	1	Intergenic	novelGene_8263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAATCAGAGACTC	8389	False	NA	NA	False	NA	NA	NA	44053110	44052928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_44052900_44053100
m54284U_201014_093907/53872930/ccs	chr6	+	821	1	Intergenic	novelGene_3318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAGAAGAAACACATTCCA	2462	False	NA	NA	False	NA	NA	NA	71379771	71380592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_71379800_71380600
m54284U_201014_093907/53936262/ccs	chr13	-	6171	36	NIC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-71	-781	combination_of_known_splicesites	FALSE	canonical	0	0	junction_34	18.2812494549102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTTGTCTTGACA	NA	False	NA	NA	False	NA	NA	NA	47083265	46904769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47082691_47082783_47083042
m54284U_201014_093907/54002629/ccs	chr8	+	5928	9	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_6	69.6235412773582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106786264	106857169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106830656_106830784_106834756_106835762_106854549
m54284U_201014_093907/54069222/ccs	chr11	+	171	1	Intergenic	novelGene_6083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACGGGGGAAAAAGGTAA	3124	False	NA	NA	False	NA	NA	NA	79415803	79415974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79415800_79416000
m54284U_201014_093907/54329883/ccs	chr5	+	202	1	Intergenic	novelGene_2718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGGCCGGAACGAGTG	NA	False	NA	NA	False	NA	NA	NA	105833232	105833434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_105833200_105833400
m54284U_201014_093907/54460598/ccs	chr13	+	183	1	Intergenic	novelGene_7164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAACAAAAGAACCA	8606	False	NA	NA	False	NA	NA	NA	64441377	64441560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_64441400_64441600
m54284U_201014_093907/54462903/ccs	chr15	+	2013	20	NNC	ENSMUSG00000008690.16	novel	3299	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_12	268.324719555716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGCTACCCCACCT	NA	False	NA	-2	True	NA	NA	NA	89239965	89255766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254123_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
m54284U_201014_093907/54594266/ccs	chr19	+	180	1	Intergenic	novelGene_9276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAGTTATACAT	NA	False	NA	NA	False	NA	NA	NA	43742904	43743084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_43742900_43743100
m54284U_201014_093907/54789456/ccs	chr14	+	187	1	Intergenic	novelGene_7441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTAATGTATGTGAGTA	NA	False	NA	6	True	NA	NA	NA	52350429	52350616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_52350400_52350600
m54284U_201014_093907/54920371/ccs	chr5	+	190	1	Intergenic	novelGene_2544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGATTTGGTTGTGTGGC	6333	False	NA	NA	False	NA	NA	NA	34416798	34416988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_34416800_34417000
m54284U_201014_093907/54985483/ccs	chr11	-	184	1	Intergenic	novelGene_6155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGACACAGTGGTTA	5694	False	NA	NA	False	NA	NA	NA	86479562	86479378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_86479400_86479600
m54284U_201014_093907/55314307/ccs	chr11	+	171	1	Intergenic	novelGene_5869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	59033499	59033670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59033500_59033700
m54284U_201014_093907/55379417/ccs	chr11	+	176	1	Intergenic	novelGene_5806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGGTATTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	50824763	50824939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_50824800_50824900
m54284U_201014_093907/55380537/ccs	chr5	-	177	1	Intergenic	novelGene_2480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	23655910	23655733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_23655700_23655900
m54284U_201014_093907/55509488/ccs	chr7	+	179	1	Intergenic	novelGene_4177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAATCCTTTTAAAATAT	NA	False	NA	NA	False	NA	NA	NA	142264025	142264204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_142264000_142264200
m54284U_201014_093907/55509785/ccs	chr18	+	3002	1	Intergenic	novelGene_8836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTACAAATGAGACACTAT	NA	False	NA	NA	False	NA	NA	NA	21063198	21066200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_21063200_21066200
m54284U_201014_093907/55640822/ccs	chr8	-	157	1	Intergenic	novelGene_4297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	58214023	58213866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_58213900_58214000
m54284U_201014_093907/55707028/ccs	chr11	+	182	1	Intergenic	novelGene_6353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	102307135	102307317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_102307100_102307300
m54284U_201014_093907/55708202/ccs	chr10	+	448	1	Intergenic	novelGene_5511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTACATTATGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	95141368	95141816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_95141400_95141800
m54284U_201014_093907/55773573/ccs	chr10	-	4163	1	Intergenic	novelGene_5284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCCCTTTTCAACCAAT	NA	False	NA	NA	False	NA	NA	NA	43235356	43231193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_43231200_43235400
m54284U_201014_093907/55968150/ccs	chr5	+	982	1	Intergenic	novelGene_2969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATCATCCCCCC	7847	False	NA	NA	False	NA	NA	NA	134711406	134712388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_134711400_134712400
m54284U_201014_093907/56100345/ccs	chr17	+	175	1	Intergenic	novelGene_8516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTATTTTATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	32026493	32026668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32026500_32026700
m54284U_201014_093907/56100805/ccs	chr8	-	188	1	Intergenic	novelGene_4191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAAAAGTTTGATC	NA	False	NA	NA	False	NA	NA	NA	4329446	4329258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_4329300_4329400
m54284U_201014_093907/56166183/ccs	chr9	-	160	1	Intergenic	novelGene_4967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGATAAAGCTGG	9987	False	NA	NA	False	NA	NA	NA	78332603	78332443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_78332400_78332600
m54284U_201014_093907/56361096/ccs	chr11	+	164	1	Intergenic	novelGene_6509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGATGCAGCCG	NA	False	NA	NA	False	NA	NA	NA	120247951	120248115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120248000_120248100
m54284U_201014_093907/56361638/ccs	chr13	+	186	1	Intergenic	novelGene_7100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAAATCATTGTATCCC	6685	False	NA	NA	False	NA	NA	NA	55456676	55456862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55456700_55456900
m54284U_201014_093907/56428274/ccs	chr5	-	212	1	Intergenic	novelGene_2701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGTCTGTGAAGGTG	NA	False	NA	NA	False	NA	NA	NA	101304347	101304135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_101304100_101304300
m54284U_201014_093907/56428915/ccs	chr5	+	153	1	Intergenic	novelGene_2485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAGAAAAT	2757	False	NA	NA	False	NA	NA	NA	24259519	24259672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_24259500_24259700
m54284U_201014_093907/56429237/ccs	chr15	-	7216	14	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	252	junction_13	31.2470590332091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597611	96585272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96596145_96596495_96596699_96597288
m54284U_201014_093907/56886294/ccs	chr1	+	175	1	Intergenic	novelGene_381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACACTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	153326081	153326256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_153326100_153326300
m54284U_201014_093907/56887956/ccs	chr11	+	156	1	Intergenic	novelGene_5787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	45950105	45950261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_45950100_45950300
m54284U_201014_093907/57016692/ccs	chr7	+	196	1	Intergenic	novelGene_4094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTAAATTTTTAACTTAG	NA	False	NA	NA	False	NA	NA	NA	126682669	126682865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_126682700_126682900
m54284U_201014_093907/57278506/ccs	chr12	+	153	1	Intergenic	novelGene_6658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	58976580	58976733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_58976600_58976700
m54284U_201014_093907/57411713/ccs	chr5	+	184	1	Intergenic	novelGene_2611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAGCTGGATATAGAA	NA	False	NA	NA	False	NA	NA	NA	73064333	73064517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_73064300_73064500
m54284U_201014_093907/57543212/ccs	chr17	-	175	1	Intergenic	novelGene_8471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATCTTTTTTTTTTAAAT	5676	False	NA	NA	False	NA	NA	NA	29143306	29143131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29143100_29143300
m54284U_201014_093907/57674462/ccs	chr5	+	197	1	Intergenic	novelGene_2714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGCTAAAGAATCTCTG	NA	False	NA	NA	False	NA	NA	NA	104725133	104725330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_104725100_104725300
m54284U_201014_093907/5768700/ccs	chr10	-	170	1	Intergenic	novelGene_5610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTTAAAGGAATGATT	NA	False	NA	NA	False	NA	NA	NA	127840812	127840642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127840600_127840800
m54284U_201014_093907/57803240/ccs	chr2	+	207	1	Intergenic	novelGene_815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	282	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAACTGTCTAAACATGA	NA	False	NA	NA	False	NA	NA	NA	62877603	62877810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_62877600_62877800
m54284U_201014_093907/57803398/ccs	chr2	-	175	1	Intergenic	novelGene_988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGGTAAAGAATTC	NA	False	NA	NA	False	NA	NA	NA	113023564	113023389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_113023400_113023600
m54284U_201014_093907/57934075/ccs	chr4	-	207	1	Intergenic	novelGene_2173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGAGCCATCACGCCCG	NA	False	NA	NA	False	NA	NA	NA	130364764	130364557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_130364600_130364800
m54284U_201014_093907/57999842/ccs	chr7	-	175	1	Intergenic	novelGene_4183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAAAGGGGAGTTTATCC	NA	False	NA	NA	False	NA	NA	NA	144710470	144710295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_144710300_144710500
m54284U_201014_093907/57999924/ccs	chr14	+	183	1	Intergenic	novelGene_7529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTTAACGGAGAATTCG	NA	False	NA	NA	False	NA	NA	NA	68574577	68574760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_68574600_68574800
m54284U_201014_093907/58001092/ccs	chr11	-	1279	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	322	junction_7	6065.11492471495	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110823_33110922_33111105_33111226_33111547_33111628_33112921
m54284U_201014_093907/58196074/ccs	chr17	+	414	1	Intergenic	novelGene_8743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAAGCCTGGCA	NA	False	NA	NA	False	NA	NA	NA	80584097	80584511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_80584100_80584500
m54284U_201014_093907/58261925/ccs	chr5	+	161	1	Intergenic	novelGene_2903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTTCTATAAGA	5771	False	NA	NA	False	NA	NA	NA	124604546	124604707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_124604500_124604700
m54284U_201014_093907/58263299/ccs	chr4	-	3304	4	NIC	ENSMUSG00000044700.16	novel	3620	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	161.361567777323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGCGTCTTTTTTTCTTTC	NA	False	NA	-8	True	AATAAA	-39	NA	149822501	149809320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_149811888_149812358_149812709_149813992_149814170_149822291
m54284U_201014_093907/58327162/ccs	chr5	-	191	1	Intergenic	novelGene_2455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAATAAAAGAATGGCT	NA	False	NA	NA	False	NA	NA	NA	5751795	5751604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_5751600_5751800
m54284U_201014_093907/5833351/ccs	chr8	+	171	1	Intergenic	novelGene_4363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATGTAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	84578359	84578530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_84578400_84578500
m54284U_201014_093907/58459435/ccs	chr8	-	169	1	Intergenic	novelGene_4331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAGTTTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	71293355	71293186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_71293200_71293400
m54284U_201014_093907/58590069/ccs	chr7	+	172	1	Intergenic	novelGene_4066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAAACAAC	572	False	NA	NA	False	NA	NA	NA	121739975	121740147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_121740000_121740100
m54284U_201014_093907/58654979/ccs	chr14	+	176	1	Intergenic	novelGene_7444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	52376546	52376722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_52376500_52376700
m54284U_201014_093907/58917180/ccs	chr7	+	4151	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	259	junction_4	50.1174238448018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTCCATTTGGTC	NA	False	NA	21	True	AATAAA	-22	NA	127187938	127202766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127187984_127188096_127188301_127188683_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
m54284U_201014_093907/58982888/ccs	chr19	-	179	1	Intergenic	novelGene_9288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTGCTTAGTCCA	NA	False	NA	NA	False	NA	NA	NA	45126290	45126111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45126100_45126300
m54284U_201014_093907/59244985/ccs	chr3	+	181	1	Intergenic	novelGene_1410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGCATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	53739290	53739471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_53739300_53739500
m54284U_201014_093907/59377085/ccs	chr8	+	178	1	Intergenic	novelGene_4393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCTCTGAGACAG	NA	False	NA	NA	False	NA	NA	NA	87646106	87646284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_87646100_87646300
m54284U_201014_093907/59508701/ccs	chr15	+	177	1	Intergenic	novelGene_7676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATATATTCAGGGT	NA	False	NA	NA	False	NA	NA	NA	35543103	35543280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_35543100_35543300
m54284U_201014_093907/59574503/ccs	chr12	+	202	1	Intergenic	novelGene_6873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTTTGTTGGTGGCTA	NA	False	NA	NA	False	NA	NA	NA	105542884	105543086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105542900_105543100
m54284U_201014_093907/5966611/ccs	chr1	-	4629	21	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	48.9779542243242	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408262	36374810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393243_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406830_36407116_36408185
m54284U_201014_093907/59770680/ccs	chr10	+	2758	1	Genic_Genomic	ENSMUSG00000054206.3	novel	NA	NA	NA	NA	-255	-3738	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTCTGCTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	79524598	79527356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_+_79524600_79527400
m54284U_201014_093907/59835049/ccs	chr17	+	184	1	Intergenic	novelGene_8509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTATAAAAAAAATCCAC	NA	False	NA	NA	False	NA	NA	NA	31633624	31633808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_31633600_31633800
m54284U_201014_093907/59835920/ccs	chr4	-	169	1	Intergenic	novelGene_2386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTTTTTTTGTTTGTTG	9506	False	NA	-12	True	NA	NA	NA	149417114	149416945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_149416900_149417100
m54284U_201014_093907/59900034/ccs	chr11	+	178	1	Intergenic	novelGene_6352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGATATATAGTTTAGGA	NA	False	NA	NA	False	NA	NA	NA	102173904	102174082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_102173900_102174100
m54284U_201014_093907/60295918/ccs	chr3	-	3758	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	-243	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	278.999077430555	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3507	False	NA	-2	True	AATATA	-16	NA	89959822	89907842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201014_093907/60359662/ccs	chr7	+	2739	7	NIC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	330.342961514578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43896248_43896661_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201014_093907/60687629/ccs	chr1	+	217	1	Intergenic	novelGene_144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAAGCCATACGTGGTG	NA	False	NA	NA	False	NA	NA	NA	59795000	59795217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_59795000_59795200
m54284U_201014_093907/60688736/ccs	chr5	+	183	1	Intergenic	novelGene_2488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATATCGCAGTCCCTGAT	NA	False	NA	NA	False	NA	NA	NA	24787423	24787606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_24787400_24787600
m54284U_201014_093907/60753207/ccs	chr18	-	3142	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-115	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_20	49.7749187149641	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTGGGCTGTCCCAG	NA	False	NA	38	True	NA	NA	NA	34140134	33929969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024473_34024530_34054882_34054988_34139037_34139476_34139821
m54284U_201014_093907/60753422/ccs	chr1	+	2638	1	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	0	-30215	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTACTCACTAAATCTAC	NA	False	NA	NA	False	AATAAA	-18	NA	105918135	105920773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_105918100_105920800
m54284U_201014_093907/60819209/ccs	chr2	-	196	1	Intergenic	novelGene_1176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	156036192	156035996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156036000_156036200
m54284U_201014_093907/60819499/ccs	chr18	-	186	1	Intergenic	novelGene_8979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGCCTTCAGTCTA	NA	False	NA	NA	False	NA	NA	NA	63259851	63259665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_63259700_63259900
m54284U_201014_093907/60885366/ccs	chr3	+	186	1	FSM	ENSMUSG00000078578.10	ENSMUST00000196248.2	19300	1	15451	3663	-311	-749	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAATGTGGAACGAGT	NA	False	NA	NA	False	NA	NA	NA	135160075	135160261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_135160100_135160300
m54284U_201014_093907/60950672/ccs	chr5	+	181	1	Intergenic	novelGene_2928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGAGGCTCTGACCCTC	1571	False	NA	NA	False	NA	NA	NA	127659068	127659249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_127659100_127659200
m54284U_201014_093907/6095094/ccs	chr13	+	183	1	Intergenic	novelGene_7208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTACTTTTAAGGAAGCCA	574	False	NA	NA	False	NA	NA	NA	74494651	74494834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_74494700_74494800
m54284U_201014_093907/61079681/ccs	chr11	+	2184	1	Intergenic	novelGene_6518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	170	False	NA	NA	False	NA	NA	NA	120731042	120733226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120731000_120733200
m54284U_201014_093907/61145484/ccs	chr4	-	2462	11	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	0	-2055	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	101.622094054394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGGGATACTCTAGCA	7947	False	NA	-16	True	ATTAAA	-15	NA	129534771	129521930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534723
m54284U_201014_093907/61409044/ccs	chr2	-	3745	8	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	108	junction_6	11.3999641961486	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915289	179900332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
m54284U_201014_093907/61540283/ccs	chr5	-	4466	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	0	-109	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	61.0244571872622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087076	20963769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
m54284U_201014_093907/61671760/ccs	chr11	-	3786	27	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	29	junction_23	52.571802125267	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120992	102086572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097598_102097732_102097993_102109241_102109314_102115559_102115782_102120830
m54284U_201014_093907/61735223/ccs	chrX	+	3446	1	NIC	ENSMUSG00000047045.18	novel	1742	7	NA	NA	0	-86430	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141464410	141467856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_141464400_141467900
m54284U_201014_093907/61735831/ccs	chr1	-	180	1	Intergenic	novelGene_551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAACCTTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	191066345	191066165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_191066200_191066300
m54284U_201014_093907/61736636/ccs	chr19	-	3428	10	ISM	ENSMUSG00000036098.16	ENSMUST00000186854.7	1517	13	1153	-2028	1153	0	3prime_fragment	FALSE	canonical	2	8	junction_8	3.77450838921401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	NA	False	NA	0	True	NA	NA	NA	10193739	10185635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424
m54284U_201014_093907/62062991/ccs	chr1	-	258	1	Intergenic	novelGene_387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATGCCTTTCCTATAA	NA	False	NA	58	True	NA	NA	NA	153385458	153385200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153385200_153385500
m54284U_201014_093907/62128317/ccs	chr14	+	4605	1	Genic_Genomic	ENSMUSG00000040822.8	novel	NA	NA	NA	NA	0	79	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCCTCGGCGTCCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	54923672	54928277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr14_+_54923700_54928300
m54284U_201014_093907/62129794/ccs	chr6	+	180	1	Intergenic	novelGene_3138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAATACTGACAGTTT	NA	False	NA	NA	False	NA	NA	NA	29788301	29788481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29788300_29788500
m54284U_201014_093907/62130231/ccs	chr19	+	153	1	Intergenic	novelGene_9322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCAGATCCAGATCCACC	621	False	NA	NA	False	NA	NA	NA	46988561	46988714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46988600_46988700
m54284U_201014_093907/62261818/ccs	chr6	+	172	1	Intergenic	novelGene_3163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTCAAGTTTAACTT	NA	False	NA	NA	False	NA	NA	NA	34353057	34353229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_34353100_34353200
m54284U_201014_093907/62392246/ccs	chr15	+	4254	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-136	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.274064643576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	770	False	NA	25	True	AATAAA	-26	NA	102111946	102124041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116706_102116797_102117589_102117709_102121030
m54284U_201014_093907/62456445/ccs	chr11	-	2893	15	NNC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	1642	intron_retention	FALSE	canonical	1	23	junction_1	275.259664050259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACGAGAGGTTAAAGCCC	NA	False	NA	-2	True	CATAAA	-20	NA	120687229	120678384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
m54284U_201014_093907/62523092/ccs	chr17	+	180	1	Intergenic	novelGene_8567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATCACAGCTAGGCA	3045	False	NA	NA	False	NA	NA	NA	35891177	35891357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35891200_35891400
m54284U_201014_093907/62654992/ccs	chr11	-	176	1	Intergenic	novelGene_6427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAATAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	107501330	107501154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107501200_107501300
m54284U_201014_093907/62784440/ccs	chr15	-	3032	17	NIC	ENSMUSG00000042632.18	novel	3318	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_16	39.5790348543266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGTACAGTGTGTGC	NA	False	NA	-10	True	AATAAA	-16	NA	79212453	79170427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
m54284U_201014_093907/6291611/ccs	chr18	-	3159	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	63.814060950546	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600913_70601589_70602519_70602849_70604743_70605051_70605361
m54284U_201014_093907/62982447/ccs	chr9	+	2966	1	NIC	ENSMUSG00000097574.3	novel	1444	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTTGGGATTTCTTTT	NA	False	NA	3	True	AATAAA	-14	NA	78083195	78086161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_78083200_78086200
m54284U_201014_093907/63046347/ccs	chr4	-	180	2	Antisense	novelGene_ENSMUSG00000028760.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3837	False	NA	NA	False	NA	NA	NA	137781835	137741327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_137741460_137781787
m54284U_201014_093907/63113619/ccs	chr4	+	174	1	Intergenic	novelGene_1881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGCTCAAATT	NA	False	NA	NA	False	NA	NA	NA	58882357	58882531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_58882400_58882500
m54284U_201014_093907/63113791/ccs	chr4	+	191	1	Intergenic	novelGene_2005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTTAAAAAAATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	111505548	111505739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_111505500_111505700
m54284U_201014_093907/63113994/ccs	chr7	-	176	1	Intergenic	novelGene_4043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGATAAAGCCGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	115978707	115978531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_115978500_115978700
m54284U_201014_093907/63178283/ccs	chr12	+	228	1	Intergenic	novelGene_6842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGGACCAACACCTAAAG	NA	False	NA	NA	False	NA	NA	NA	99400921	99401149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_99400900_99401100
m54284U_201014_093907/63244801/ccs	chr2	-	175	1	Intergenic	novelGene_904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGAGAAAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	84617037	84616862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_84616900_84617000
m54284U_201014_093907/63373573/ccs	chr9	+	176	1	Intergenic	novelGene_4928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCATCTGCATCTTTG	NA	False	NA	3	True	NA	NA	NA	72425160	72425336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72425200_72425300
m54284U_201014_093907/63375049/ccs	chr8	+	763	1	FSM	ENSMUSG00000100691.2	ENSMUST00000191396.2	1009	1	0	246	0	-246	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCCAGCGTTTTGGATTT	2325	False	NA	13	True	ATTAAA	-14	NA	71229458	71230221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_71229500_71230200
m54284U_201014_093907/63439154/ccs	chr18	+	3707	1	Antisense	novelGene_ENSMUSG00000042211.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGACAGCCCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	62673389	62677096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_+_62673400_62677100
m54284U_201014_093907/63767688/ccs	chr6	+	155	1	Intergenic	novelGene_3137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTAACTCCAATGAG	7589	False	NA	NA	False	NA	NA	NA	29780597	29780752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29780600_29780800
m54284U_201014_093907/63768145/ccs	chr14	-	1505	1	Antisense	novelGene_ENSMUSG00000050222.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAAAGTGTGCAAAATAT	NA	False	NA	-4	True	AATAAA	-30	NA	57763079	57761574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_-_57761600_57763100
m54284U_201014_093907/63768524/ccs	chr14	+	211	1	Intergenic	novelGene_7339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACATCCATTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	14288455	14288666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_14288500_14288700
m54284U_201014_093907/63833601/ccs	chr8	+	1371	5	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_3	146.993834904733	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAACTTTCTTTAGCAC	NA	False	NA	39	True	AATAAA	-26	NA	96442542	96445638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96444820_96444964_96445103
m54284U_201014_093907/63899555/ccs	chr6	-	185	1	FSM	ENSMUSG00000001157.14	ENSMUST00000203741.2	2750	1	1747	818	1747	-734	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTGCATCGCTCCTC	NA	False	NA	NA	False	NA	NA	NA	86692128	86691943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_86691900_86692100
m54284U_201014_093907/64422164/ccs	chr15	+	201	1	Intergenic	novelGene_7630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAGGATGTTAAAAGGG	5414	False	NA	NA	False	NA	NA	NA	8843488	8843689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8843500_8843700
m54284U_201014_093907/64487618/ccs	chr6	+	198	1	Intergenic	novelGene_3470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAACCACTTCATTGGGA	NA	False	NA	NA	False	NA	NA	NA	121149364	121149562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_121149400_121149600
m54284U_201014_093907/64751168/ccs	chr12	+	229	1	Intergenic	novelGene_6643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTCCTCAAAATTTC	NA	False	NA	NA	False	NA	NA	NA	54771209	54771438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_54771200_54771400
m54284U_201014_093907/64881273/ccs	chr4	-	1285	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	0	189	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	108.196837086652	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCAAAAAGGCTTTATT	NA	False	NA	-17	True	CATAAA	-23	NA	130253736	130209882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130253668
m54284U_201014_093907/64947267/ccs	chr9	-	186	2	Intergenic	novelGene_4895	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	332	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTACTGCCGACATAAAG	NA	False	NA	NA	False	NA	NA	NA	66395717	66192518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66192656_66395668
m54284U_201014_093907/65143275/ccs	chr7	+	182	1	Intergenic	novelGene_3749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28429510	28429692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28429500_28429700
m54284U_201014_093907/65208915/ccs	chr11	-	181	1	Intergenic	novelGene_6367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCATGGCCCCCCACC	NA	False	NA	NA	False	NA	NA	NA	104279764	104279583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_104279600_104279800
m54284U_201014_093907/65407809/ccs	chr6	+	220	1	Intergenic	novelGene_3452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	360	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTATTAAAATAGATTA	NA	False	NA	NA	False	NA	NA	NA	120064237	120064457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120064200_120064500
m54284U_201014_093907/65473009/ccs	chr11	+	2338	1	Antisense	novelGene_ENSMUSG00000009894.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4115	False	NA	NA	False	NA	NA	NA	59311042	59313380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_59311000_59313400
m54284U_201014_093907/65473307/ccs	chr19	+	191	1	Intergenic	novelGene_9147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAAGAG	7038	False	NA	NA	False	NA	NA	NA	8674798	8674989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_8674800_8675000
m54284U_201014_093907/65601543/ccs	chr17	+	189	1	Intergenic	novelGene_8700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGTGAACAGCATATT	3050	False	NA	NA	False	NA	NA	NA	71093421	71093610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71093400_71093600
m54284U_201014_093907/65602811/ccs	chrX	+	3656	1	FSM	ENSMUSG00000079297.5	ENSMUST00000112099.2	1350	1	-125	-2181	-125	2181	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAACCATAATAGCCA	NA	False	NA	NA	False	NA	NA	NA	32942998	32946654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_32943000_32946700
m54284U_201014_093907/65604143/ccs	chr4	+	175	1	Intergenic	novelGene_1816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACCATTTAGATA	NA	False	NA	NA	False	NA	NA	NA	41176996	41177171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_41177000_41177200
m54284U_201014_093907/65995903/ccs	chr11	+	4493	1	Intergenic	novelGene_5914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65044239	65048732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_65044200_65048700
m54284U_201014_093907/65996737/ccs	chr19	+	1743	1	NIC	ENSMUSG00000018820.14	novel	636	3	NA	NA	0	-870	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTCCCAAGCGCTGGA	NA	False	NA	NA	False	NA	NA	NA	42159032	42160775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_42159000_42160800
m54284U_201014_093907/66128731/ccs	chr11	-	3001	9	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_8	1495.97659887279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69561574_69561753_69561803_69563104
m54284U_201014_093907/6619922/ccs	chr11	-	177	1	Intergenic	novelGene_5916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAGAATAGAACTTGG	NA	False	NA	NA	False	NA	NA	NA	66649402	66649225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_66649200_66649400
m54284U_201014_093907/66586851/ccs	chr12	-	142	1	Intergenic	novelGene_6857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTAGGTGGGGGG	NA	False	NA	NA	False	NA	NA	NA	102592532	102592390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_102592400_102592500
m54284U_201014_093907/66716176/ccs	chr11	+	2912	10	NNC	ENSMUSG00000059248.14	novel	647	4	NA	NA	872	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	200.265811015581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	135	False	NA	91	True	AATAAA	-16	NA	117199851	117253139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_117199969_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
m54284U_201014_093907/6685315/ccs	chr2	+	192	1	Intergenic	novelGene_644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCCTAAAGCCGGATGGT	NA	False	NA	NA	False	NA	NA	NA	26414005	26414197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_26414000_26414200
m54284U_201014_093907/66968/ccs	chr17	-	1325	8	NIC	ENSMUSG00000079657.11	novel	1575	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	28.0393309769091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTCATCTGTGGAA	NA	False	NA	-13	True	AATAAA	-12	NA	24752700	24748038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24748618_24748887_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
m54284U_201014_093907/67108892/ccs	chr5	+	204	1	Intergenic	novelGene_2981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATCAACCAACCAAGCT	5674	False	NA	NA	False	NA	NA	NA	135721662	135721866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_135721700_135721900
m54284U_201014_093907/67109578/ccs	chr14	+	184	1	Intergenic	novelGene_7562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTTCGTTACCCAGA	NA	False	NA	NA	False	NA	NA	NA	79729924	79730108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_79729900_79730100
m54284U_201014_093907/67241648/ccs	chr16	-	1501	8	NNC	ENSMUSG00000022805.18	novel	3048	17	NA	NA	23173	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	14.2571142284282	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGTTGTTTGTAAAGCT	NA	False	NA	-3	True	AATAAA	-16	NA	38139001	38118115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140_38125363_38127077_38127225_38128443_38128516_38131353_38131471_38138841
m54284U_201014_093907/67437506/ccs	chr5	+	3749	6	NIC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	25.9460979725276	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGAGGTTTCTCTC	937	False	NA	10	True	ATTAAA	-15	NA	145141371	145158560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149406_145155096_145155694_145156862
m54284U_201014_093907/67504238/ccs	chr1	+	3130	24	NIC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	0	136	combination_of_known_splicesites	FALSE	canonical	1	5	junction_14	327.152866577141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACCAGACTTTAGTTG	NA	False	NA	17	True	AATAAA	-17	NA	85992362	86067009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
m54284U_201014_093907/67699905/ccs	chrX	+	185	1	Intergenic	novelGene_9546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAAGAAGAGAGGGGGAT	NA	False	NA	NA	False	NA	NA	NA	95125591	95125776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_95125600_95125800
m54284U_201014_093907/67722/ccs	chr10	+	194	1	Intergenic	novelGene_5433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAAACAGTCTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	77851860	77852054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_77851900_77852100
m54284U_201014_093907/68028805/ccs	chr11	+	5047	1	NIC	ENSMUSG00000001105.16	novel	1141	6	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCACCCCA	NA	False	NA	40	True	NA	NA	NA	78427268	78432315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78427300_78432300
m54284U_201014_093907/68092393/ccs	chr15	+	3017	21	NIC	ENSMUSG00000042303.20	novel	2997	22	NA	NA	0	186	intron_retention	FALSE	canonical	3	124	junction_4	15.0375363673708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCATCTTTTGTTGAG	NA	False	NA	17	True	AATAAA	-17	NA	80861979	80896276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
m54284U_201014_093907/68158410/ccs	chr2	+	177	1	Intergenic	novelGene_569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAGTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	4717199	4717376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_4717200_4717400
m54284U_201014_093907/68159830/ccs	chr11	+	180	1	Intergenic	novelGene_6012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTTTTGT	4987	False	NA	NA	False	NA	NA	NA	75473186	75473366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75473200_75473400
m54284U_201014_093907/68289914/ccs	chr2	+	1079	1	Intergenic	novelGene_830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGAACAAAAACAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	69522260	69523339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69522300_69523300
m54284U_201014_093907/68356342/ccs	chr2	+	170	1	Intergenic	novelGene_770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTTTTAAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	37627535	37627705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_37627500_37627700
m54284U_201014_093907/68552674/ccs	chr2	+	3274	2	Antisense	novelGene_ENSMUSG00000083817.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	60	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCATGTATTCGGAGA	NA	False	NA	NA	False	NA	NA	NA	176915247	176918605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_176918457_176918540
m54284U_201014_093907/68681826/ccs	chr10	+	197	1	Intergenic	novelGene_5559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCGACCTTAGGTATTT	NA	False	NA	NA	False	NA	NA	NA	117686760	117686957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_117686800_117687000
m54284U_201014_093907/68682337/ccs	chr6	-	5714	14	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	0	641	intron_retention	FALSE	canonical	2	9	junction_13	9.75195322568645	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTCTCTCTGAGCTAG	NA	False	NA	39	True	ATTAAA	-19	NA	90693511	90637321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
m54284U_201014_093907/68814053/ccs	chr7	-	175	1	Intergenic	novelGene_4144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAATCCAGCAAATG	NA	False	NA	NA	False	NA	NA	NA	138575527	138575352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_138575400_138575500
m54284U_201014_093907/68814120/ccs	chr11	+	3134	1	ISM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	106554	0	2733	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTCACAGTTTTCTTGT	5845	False	NA	17	True	AATAAA	-17	NA	20599887	20603021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_20599900_20603000
m54284U_201014_093907/6882571/ccs	chr12	+	178	1	Intergenic	novelGene_6694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAAGTAGGTTGCAA	2262	False	NA	NA	False	NA	NA	NA	70977247	70977425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_70977200_70977400
m54284U_201014_093907/68945566/ccs	chr15	+	168	1	Intergenic	novelGene_7892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGGTTCTAGTTATTTT	NA	False	NA	NA	False	NA	NA	NA	85771511	85771679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_85771500_85771700
m54284U_201014_093907/68946105/ccs	chr10	+	185	1	Intergenic	novelGene_5611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTACACCTTATTTTAAG	3428	False	NA	NA	False	NA	NA	NA	127853484	127853669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_127853500_127853700
m54284U_201014_093907/69206435/ccs	chr4	-	3704	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	391.668977882209	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
m54284U_201014_093907/69273769/ccs	chr3	-	108	1	FSM	ENSMUSG00000064890.3	ENSMUST00000082956.3	108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAATGCCAACTTTAAC	NA	False	NA	NA	False	NA	NA	NA	99615163	99615055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_99615100_99615200
m54284U_201014_093907/69403913/ccs	chr10	+	4351	1	FSM	ENSMUSG00000112523.2	ENSMUST00000220086.2	871	1	829	-4309	829	4309	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGCTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	106019710	106024061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_106019700_106024100
m54284U_201014_093907/69405338/ccs	chr3	+	145	1	Intergenic	novelGene_1459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAAAAAAAAAAAT	4619	False	NA	NA	False	NA	NA	NA	86108827	86108972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_86108800_86109000
m54284U_201014_093907/69534202/ccs	chr1	-	107	1	FSM	ENSMUSG00000119061.1	ENSMUST00000239739.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTCACTCAACCAATAA	NA	False	NA	NA	False	NA	NA	NA	95759960	95759853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_95759900_95760000
m54284U_201014_093907/69665076/ccs	chr11	+	188	1	Intergenic	novelGene_5818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTGAGTATCGAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	52071799	52071987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_52071800_52072000
m54284U_201014_093907/69927090/ccs	chr4	-	176	1	Intergenic	novelGene_2377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	149197422	149197246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_149197200_149197400
m54284U_201014_093907/69992555/ccs	chr4	+	188	1	Intergenic	novelGene_2205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAAAACCAAACTAA	6988	False	NA	NA	False	NA	NA	NA	132588485	132588673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132588500_132588700
m54284U_201014_093907/70125138/ccs	chr3	-	178	1	Intergenic	novelGene_1627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAGTTAAAAAAAA	2451	False	NA	NA	False	NA	NA	NA	108224189	108224011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108224000_108224200
m54284U_201014_093907/70125577/ccs	chr4	-	192	1	Intergenic	novelGene_2347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAAAGCTTCTTTTCCAT	NA	False	NA	NA	False	NA	NA	NA	146511106	146510914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146510900_146511100
m54284U_201014_093907/70191758/ccs	chr12	-	160	1	Intergenic	novelGene_6812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGCAATGTAAAGT	NA	False	NA	-1	True	NA	NA	NA	85556675	85556515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85556500_85556700
m54284U_201014_093907/70256410/ccs	chr4	+	300	1	Intergenic	novelGene_2307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATTTATACAGATG	774	False	NA	NA	False	NA	NA	NA	141283700	141284000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141283700_141284000
m54284U_201014_093907/70582677/ccs	chr5	+	181	1	Intergenic	novelGene_2698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	100971912	100972093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_100971900_100972100
m54284U_201014_093907/70649138/ccs	chr9	-	1606	7	NIC	ENSMUSG00000032306.15	novel	1780	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	97.3077877436105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCAGCCTTTGGTAT	8951	False	NA	-8	True	ATTAAA	-30	NA	57460046	57451538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57452222_57452477_57452687_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
m54284U_201014_093907/7077990/ccs	chr14	+	200	1	Intergenic	novelGene_7364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTCAATTTCAAAATCC	NA	False	NA	NA	False	NA	NA	NA	26323843	26324043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_26323800_26324000
m54284U_201014_093907/70911380/ccs	chr9	+	183	1	FSM	ENSMUSG00000102330.2	ENSMUST00000193259.2	1441	1	397	861	397	-861	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATTTTAATATAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	72796723	72796906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72796700_72796900
m54284U_201014_093907/71434384/ccs	chr19	-	159	1	Antisense	novelGene_ENSMUSG00000024811.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	36864826	36864667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_-_36864700_36864800
m54284U_201014_093907/71631204/ccs	chrY	+	4078	1	Intergenic	novelGene_9741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	87788230	87792308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrY_+_87788200_87792300
m54284U_201014_093907/71893791/ccs	chr7	+	179	1	Intergenic	novelGene_4061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAACTGCCCTCCA	16	False	NA	NA	False	NA	NA	NA	120553083	120553262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_120553100_120553300
m54284U_201014_093907/71960740/ccs	chr1	+	182	1	Intergenic	novelGene_132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCATCCTTGAATCTTC	NA	False	NA	NA	False	NA	NA	NA	58474566	58474748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_58474600_58474700
m54284U_201014_093907/72026614/ccs	chr2	+	252	1	Intergenic	novelGene_826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTGAGCATGGTG	NA	False	NA	NA	False	NA	NA	NA	69476058	69476310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69476100_69476300
m54284U_201014_093907/721952/ccs	chr19	-	3326	3	NIC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	97	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGCATCTTAGAAATT	1885	False	NA	-13	True	AATAAA	-11	NA	8796697	8786438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_8789203_8795799_8796049_8796384
m54284U_201014_093907/72222324/ccs	chr11	-	181	1	Intergenic	novelGene_6349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAACTGAAAGAAA	2525	False	NA	NA	False	NA	NA	NA	102049170	102048989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_102049000_102049200
m54284U_201014_093907/72419118/ccs	chr14	-	172	1	Intergenic	novelGene_7531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGGAAAAGAAAAA	1282	False	NA	NA	False	NA	NA	NA	70055710	70055538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_70055500_70055700
m54284U_201014_093907/72485476/ccs	chr13	+	188	1	Intergenic	novelGene_7204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTCTTCAGAGGTACT	NA	False	NA	NA	False	NA	NA	NA	73908904	73909092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_73908900_73909100
m54284U_201014_093907/72548574/ccs	chr11	+	1249	1	Intergenic	novelGene_5904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTCTACAAAAACTTAG	NA	False	NA	NA	False	NA	NA	NA	62305919	62307168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_62305900_62307200
m54284U_201014_093907/72548907/ccs	chr16	-	193	1	Genic_Genomic	ENSMUSG00000116951.2	novel	NA	NA	NA	NA	868	13	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTTTGATGAGACTCAG	5912	False	NA	NA	False	NA	NA	NA	30688041	30687848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_-_30687800_30688000
m54284U_201014_093907/72550333/ccs	chr17	+	171	1	Intergenic	novelGene_8508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGCATGTGGACA	NA	False	NA	NA	False	NA	NA	NA	31459531	31459702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_31459500_31459700
m54284U_201014_093907/72614722/ccs	chr3	+	1663	1	Intergenic	novelGene_1612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7693	False	NA	NA	False	NA	NA	NA	103976338	103978001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_103976300_103978000
m54284U_201014_093907/72811196/ccs	chr1	-	166	1	Intergenic	novelGene_390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTTTAAAAAAAAATC	6313	False	NA	NA	False	NA	NA	NA	153401474	153401308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153401300_153401500
m54284U_201014_093907/72876421/ccs	chr4	+	190	1	Intergenic	novelGene_2207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCACCTGGGCTTGTAG	NA	False	NA	NA	False	NA	NA	NA	132654049	132654239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132654000_132654200
m54284U_201014_093907/72876950/ccs	chr16	+	194	1	Intergenic	novelGene_8254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAGTAGAACAG	4918	False	NA	NA	False	NA	NA	NA	38376907	38377101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_38376900_38377100
m54284U_201014_093907/72942304/ccs	chrX	+	2808	9	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	121.408144290241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7630197	7641440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7630238_7631745_7631860_7632793_7633095_7633677_7633924_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
m54284U_201014_093907/73138656/ccs	chr13	+	184	1	Intergenic	novelGene_7214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	76377349	76377533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_76377300_76377500
m54284U_201014_093907/73270391/ccs	chr6	+	183	1	Intergenic	novelGene_3106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTTATTATTATTAATA	NA	False	NA	NA	False	NA	NA	NA	11286353	11286536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_11286400_11286500
m54284U_201014_093907/73402668/ccs	chr2	+	3740	1	Intergenic	novelGene_989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGAGCATACACTAGC	NA	False	NA	NA	False	NA	NA	NA	114390605	114394345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_114390600_114394300
m54284U_201014_093907/7340691/ccs	chr10	+	176	1	Intergenic	novelGene_5408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAATCTGTG	7145	False	NA	NA	False	NA	NA	NA	75437197	75437373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75437200_75437400
m54284U_201014_093907/7342767/ccs	chr19	+	184	1	Intergenic	novelGene_9247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAAGCTAATTTGAG	NA	False	NA	NA	False	NA	NA	NA	38911640	38911824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_38911600_38911800
m54284U_201014_093907/73468593/ccs	chr9	+	179	1	Intergenic	novelGene_5141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAGGCAGGCA	1204	False	NA	NA	False	NA	NA	NA	118927872	118928051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_118927900_118928100
m54284U_201014_093907/73468744/ccs	chr2	+	194	1	Intergenic	novelGene_611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAACTACATTTATATT	7534	False	NA	NA	False	NA	NA	NA	19308122	19308316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_19308100_19308300
m54284U_201014_093907/73531760/ccs	chr6	+	202	1	Intergenic	novelGene_3582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAACATCAAGTACTTTT	NA	False	NA	NA	False	NA	NA	NA	148748728	148748930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_148748700_148748900
m54284U_201014_093907/73533310/ccs	chr11	+	162	1	Intergenic	novelGene_6137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCGGACCCGAAAAAACT	1227	False	NA	NA	False	NA	NA	NA	84946144	84946306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_84946100_84946300
m54284U_201014_093907/73597701/ccs	chr1	+	188	1	Intergenic	novelGene_290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAATAAAATATCT	5263	False	NA	NA	False	NA	NA	NA	128049746	128049934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_128049700_128049900
m54284U_201014_093907/73599102/ccs	chr1	-	181	1	Intergenic	novelGene_505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAATAAAAAAAGCTGCA	NA	False	NA	NA	False	NA	NA	NA	179566069	179565888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_179565900_179566100
m54284U_201014_093907/73730699/ccs	chr4	+	7662	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	30.0910937471953	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150366045	150706423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
m54284U_201014_093907/73794303/ccs	chr3	-	177	1	Intergenic	novelGene_1469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAATAACAG	NA	False	NA	NA	False	NA	NA	NA	87120814	87120637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_87120600_87120800
m54284U_201014_093907/73925631/ccs	chr18	+	170	1	Intergenic	novelGene_8963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	56649732	56649902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_56649700_56649900
m54284U_201014_093907/73992422/ccs	chr3	+	3821	1	FSM	ENSMUSG00000103464.2	ENSMUST00000194318.2	1511	1	-2310	0	-2310	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	51008770	51012591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_51008800_51012600
m54284U_201014_093907/74122274/ccs	chr8	+	200	1	Intergenic	novelGene_4461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAATCTTTGTTTGTT	7089	False	NA	NA	False	NA	NA	NA	107513349	107513549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_107513300_107513500
m54284U_201014_093907/74450207/ccs	chr11	+	189	1	Intergenic	novelGene_6460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACTGGCTGGTGTGGTGG	7380	False	NA	NA	False	NA	NA	NA	115620872	115621061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115620900_115621100
m54284U_201014_093907/74973415/ccs	chr5	+	177	1	Intergenic	novelGene_3046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	143399239	143399416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_143399200_143399400
m54284U_201014_093907/75105877/ccs	chr4	-	1896	1	Intergenic	novelGene_2336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCACAAGTTAATTGATTC	882	False	NA	NA	False	NA	NA	NA	146223932	146222036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146222000_146223900
m54284U_201014_093907/75235686/ccs	chr6	+	1634	1	Antisense	novelGene_ENSMUSG00000108268.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88016232	88017866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_+_88016200_88017900
m54284U_201014_093907/75303133/ccs	chr5	+	265	1	FSM	ENSMUSG00000106926.2	ENSMUST00000200912.2	799	1	608	-74	608	74	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTACATAGAATCTACA	NA	False	NA	NA	False	AATAAA	-34	NA	82485305	82485570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_82485300_82485600
m54284U_201014_093907/75433828/ccs	chr17	+	2161	10	NIC	ENSMUSG00000002280.12	novel	1921	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_9	80.7062957447528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTGTCTGGTACC	6951	False	NA	11	True	AATAAA	-23	NA	25992780	26001770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000705_26000989
m54284U_201014_093907/75957719/ccs	chr3	+	2953	6	NIC	ENSMUSG00000091512.6	novel	1295	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	124	junction_3	79.1267337882716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCTCTGTATAGGCCT	60	False	NA	2	True	AATAAA	-22	NA	137624266	137634526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137632704_137633107_137633172_137633707
m54284U_201014_093907/76220683/ccs	chr6	-	2029	11	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_10	136.483552122591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354717	113343615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276_113354335_113354450
m54284U_201014_093907/76220817/ccs	chr7	+	220	1	Intergenic	novelGene_4154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAACCAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	140564193	140564413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140564200_140564400
m54284U_201014_093907/76284698/ccs	chr4	+	203	1	Intergenic	novelGene_2402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTTATCTGTATTTTT	5309	False	NA	NA	False	NA	NA	NA	150683448	150683651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_150683400_150683700
m54284U_201014_093907/76285829/ccs	chr6	-	5624	13	NIC	ENSMUSG00000034312.16	novel	8036	14	NA	NA	0	601	intron_retention	FALSE	canonical	2	4	junction_1	13.2748718344933	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGGAGTGGTAACATTA	NA	False	NA	-1	True	AATACA	-21	NA	90693511	90637361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_90639938_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
m54284U_201014_093907/76415398/ccs	chr4	-	177	1	Intergenic	novelGene_1863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	49234610	49234433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_49234400_49234600
m54284U_201014_093907/76483355/ccs	chr15	-	183	1	Intergenic	novelGene_7873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAACCAAAAT	1788	False	NA	NA	False	NA	NA	NA	83472308	83472125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_83472100_83472300
m54284U_201014_093907/76612349/ccs	chr15	+	183	1	Intergenic	novelGene_7776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATACTAAGGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	76451604	76451787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76451600_76451800
m54284U_201014_093907/76679223/ccs	chr18	+	3237	1	Intergenic	novelGene_8831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AAGAAA	-43	NA	20873132	20876369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_20873100_20876400
m54284U_201014_093907/76809722/ccs	chr11	-	2731	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_10	155.769348717904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
m54284U_201014_093907/77005268/ccs	chr9	-	1341	1	FSM	ENSMUSG00002076266.1	ENSMUST00020182013.1	121	1	-1002	-218	-1002	218	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTCTCACTGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	108531929	108530588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_108530600_108531900
m54284U_201014_093907/77070455/ccs	chr1	+	155	1	Intergenic	novelGene_481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	171450484	171450639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171450500_171450600
m54284U_201014_093907/77072736/ccs	chr11	+	868	4	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	-4273	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	151.078346121033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117898895	117914837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_117898955_117905472_117905549_117910432_117910559_117914230
m54284U_201014_093907/77138617/ccs	chr3	+	252	1	Intergenic	novelGene_1624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCACCTGTATAAGTGA	4846	False	NA	NA	False	AAAAAG	-32	NA	107902144	107902396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_107902100_107902400
m54284U_201014_093907/77332879/ccs	chr16	-	174	1	Intergenic	novelGene_8308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATGTCAGTACATA	NA	False	NA	NA	False	NA	NA	NA	87318794	87318620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_87318600_87318800
m54284U_201014_093907/7735880/ccs	chr3	+	4844	1	Antisense	novelGene_ENSMUSG00000042520.17_AS_novelGene_ENSMUSG00000077569.3_AS_novelGene_ENSMUSG00000098397.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAGAAAAAAAAA	1372	False	NA	NA	False	AGTAAA	-24	NA	89914267	89919111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_89914300_89919100
m54284U_201014_093907/77466330/ccs	chr19	+	164	1	Intergenic	novelGene_9306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	45998124	45998288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45998100_45998300
m54284U_201014_093907/77923270/ccs	chr4	+	220	1	Intergenic	novelGene_2413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAGATCTGCAGCCCA	NA	False	NA	NA	False	NA	NA	NA	152525775	152525995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_152525800_152526000
m54284U_201014_093907/78053545/ccs	chr5	-	196	1	Intergenic	novelGene_2947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAAGTTCATCAGAC	NA	False	NA	NA	False	NA	NA	NA	129921627	129921431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129921400_129921600
m54284U_201014_093907/78251481/ccs	chr17	-	174	1	Intergenic	novelGene_8534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAACAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	33891473	33891299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_33891300_33891500
m54284U_201014_093907/78383721/ccs	chr10	-	174	1	Intergenic	novelGene_5424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCCTGCACTCATCTTAA	7084	False	NA	NA	False	NA	NA	NA	76877380	76877206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_76877200_76877400
m54284U_201014_093907/78446664/ccs	chr18	+	199	1	Intergenic	novelGene_9056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCCTTCTTCAGATCGAA	468	False	NA	NA	False	NA	NA	NA	84713005	84713204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_84713000_84713200
m54284U_201014_093907/78514969/ccs	chr9	-	138	1	Intergenic	novelGene_4654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAATCCTGTTTCTGGT	NA	False	NA	NA	False	NA	NA	NA	21011390	21011252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21011300_21011400
m54284U_201014_093907/78643641/ccs	chr6	-	3332	6	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1123	junction_1	275.047195950077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTATGCCAGGAGAT	NA	False	NA	-16	True	ATTAAA	-13	NA	124942170	124935375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941686
m54284U_201014_093907/78644347/ccs	chr11	+	150	1	Intergenic	novelGene_5996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAGCACTTTACATTAA	NA	False	NA	NA	False	NA	NA	NA	74871811	74871961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74871800_74872000
m54284U_201014_093907/788329/ccs	chr4	+	155	1	Intergenic	novelGene_2046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAAAAATTTAGCAC	NA	False	NA	NA	False	NA	NA	NA	117631118	117631273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_117631100_117631300
m54284U_201014_093907/78840723/ccs	chr4	+	1493	10	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	1298.89284287964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2348	False	NA	19	True	AATAAA	-19	NA	132262877	132281053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132279351_132279461_132280327
m54284U_201014_093907/78973683/ccs	chr5	-	175	1	Intergenic	novelGene_2680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTTAAAGAGTTCTA	8417	False	NA	NA	False	NA	NA	NA	93142299	93142124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_93142100_93142300
m54284U_201014_093907/79038664/ccs	chr4	+	1669	1	Genic_Genomic	ENSMUSG00000083816.4	novel	NA	NA	NA	NA	-215	-410	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGATGCTGTCCTCCCCTGC	231	False	NA	NA	False	NA	NA	NA	132611858	132613527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_+_132611900_132613500
m54284U_201014_093907/79038768/ccs	chr13	+	4981	1	Intergenic	novelGene_7217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGACCGTTTTCTCGTTG	NA	False	NA	NA	False	NA	NA	NA	80849207	80854188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_80849200_80854200
m54284U_201014_093907/79102343/ccs	chr12	+	188	1	Intergenic	novelGene_6746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCATAGACATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	78877021	78877209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_78877000_78877200
m54284U_201014_093907/79169410/ccs	chr10	+	190	1	Intergenic	novelGene_5213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTACGGCTAGTGCAGTG	NA	False	NA	NA	False	NA	NA	NA	19954381	19954571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_19954400_19954600
m54284U_201014_093907/79233314/ccs	chr14	-	195	1	Intergenic	novelGene_7539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCATGGTCCAAGT	NA	False	NA	NA	False	NA	NA	NA	75145809	75145614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_75145600_75145800
m54284U_201014_093907/79235248/ccs	chr11	-	3609	20	NNC	ENSMUSG00000020752.12	novel	3971	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_19	18.5488797998223	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTGGGTGTTTTAC	NA	False	NA	-2	True	AATAAA	-33	NA	115824303	115783420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614_115823745_115824106
m54284U_201014_093907/79301401/ccs	chrX	+	176	1	Intergenic	novelGene_9736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	166955090	166955266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_166955100_166955300
m54284U_201014_093907/79365728/ccs	chr19	+	204	1	Intergenic	novelGene_9135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAACTGGCTGGGCATG	NA	False	NA	NA	False	NA	NA	NA	7188392	7188596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_7188400_7188600
m54284U_201014_093907/79495756/ccs	chr10	+	181	1	Intergenic	novelGene_5281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCCCTGAGGAGATGC	NA	False	NA	NA	False	NA	NA	NA	42523896	42524077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_42523900_42524100
m54284U_201014_093907/79496579/ccs	chr6	+	189	1	Intergenic	novelGene_3267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCCAAAAAACAAAATTCTAA	NA	False	NA	NA	False	NA	NA	NA	50538759	50538948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_50538800_50538900
m54284U_201014_093907/79497770/ccs	chr2	+	215	1	Intergenic	novelGene_1076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAAGCTTTTCTTCATC	NA	False	NA	NA	False	AGTAAA	-21	NA	131876042	131876257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_131876000_131876300
m54284U_201014_093907/79691958/ccs	chr1	+	178	1	Intergenic	novelGene_322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAACATTTAACAA	NA	False	NA	NA	False	NA	NA	NA	133479591	133479769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_133479600_133479800
m54284U_201014_093907/79758684/ccs	chr6	+	181	1	Intergenic	novelGene_3309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACAACCCATAC	NA	False	NA	NA	False	NA	NA	NA	67217853	67218034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_67217900_67218000
m54284U_201014_093907/79823867/ccs	chr10	+	178	1	Intergenic	novelGene_5349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGTGGAAACCCATTAA	NA	False	NA	NA	False	NA	NA	NA	62528968	62529146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62529000_62529100
m54284U_201014_093907/80151644/ccs	chr1	-	176	1	Intergenic	novelGene_533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGAACTTACTATG	NA	False	NA	NA	False	NA	NA	NA	182805759	182805583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_182805600_182805800
m54284U_201014_093907/80281715/ccs	chrX	+	210	1	Intergenic	novelGene_9663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATGCAATACTCTAAGT	NA	False	NA	NA	False	AATGAA	-15	NA	149877297	149877507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_149877300_149877500
m54284U_201014_093907/8061775/ccs	chr17	+	187	1	Intergenic	novelGene_8425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTCTCAGCCGGGTAG	1860	False	NA	NA	False	NA	NA	NA	26089139	26089326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_26089100_26089300
m54284U_201014_093907/8062778/ccs	chr15	+	882	1	Intergenic	novelGene_7636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATGTTCAGAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	10482021	10482903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_10482000_10482900
m54284U_201014_093907/8063172/ccs	chr5	+	201	1	FSM	ENSMUSG00000104761.2	ENSMUST00000197084.2	2297	1	2096	0	2096	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAGAGATGGAAAGGG	NA	False	NA	NA	False	NA	NA	NA	100948710	100948911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_100948700_100948900
m54284U_201014_093907/8063810/ccs	chr2	+	161	1	Intergenic	novelGene_1309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAGGATTGTAA	NA	False	NA	NA	False	NA	NA	NA	179590887	179591048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_179590900_179591000
m54284U_201014_093907/80742888/ccs	chr19	+	191	1	Intergenic	novelGene_9066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTTCTAAATTAAGACA	NA	False	NA	NA	False	NA	NA	NA	3728632	3728823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3728600_3728800
m54284U_201014_093907/80937578/ccs	chr11	+	173	1	Intergenic	novelGene_6134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAGCATT	NA	False	NA	NA	False	NA	NA	NA	84866540	84866713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_84866500_84866700
m54284U_201014_093907/80938608/ccs	chrX	+	186	1	Intergenic	novelGene_9516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGAAAGGGTATAGA	NA	False	NA	NA	False	NA	NA	NA	76562261	76562447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_76562300_76562400
m54284U_201014_093907/81068164/ccs	chr17	+	1928	1	Antisense	novelGene_ENSMUSG00000062078.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAACCACCGCAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	10433800	10435728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_10433800_10435700
m54284U_201014_093907/81133596/ccs	chr7	-	201	1	Intergenic	novelGene_3737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCAAATCTCTAACTGAA	NA	False	NA	NA	False	NA	NA	NA	28086984	28086783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28086800_28087000
m54284U_201014_093907/81135014/ccs	chr2	+	2126	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	132	junction_7	701.069475872399	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
m54284U_201014_093907/8128382/ccs	chr2	-	181	1	Intergenic	novelGene_713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGTTTTAAAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	32026728	32026547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32026500_32026700
m54284U_201014_093907/81330186/ccs	chr8	+	176	1	Intergenic	novelGene_4273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTAAAAAAAAGCAACAAAC	NA	False	NA	NA	False	NA	NA	NA	41551699	41551875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_41551700_41551900
m54284U_201014_093907/81461606/ccs	chr12	-	174	1	Intergenic	novelGene_6536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCTGAGTGAGCAGGGT	NA	False	NA	NA	False	NA	NA	NA	3664024	3663850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_3663800_3664000
m54284U_201014_093907/81462493/ccs	chr5	-	1296	3	NNC	ENSMUSG00000029190.20	novel	2014	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	47	junction_1	14.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGTATTATGTTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	36853314	36828742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_36829428_36830091_36830587_36853198
m54284U_201014_093907/81789034/ccs	chr12	+	157	1	Intergenic	novelGene_6584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	20776262	20776419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_20776300_20776400
m54284U_201014_093907/81789879/ccs	chr1	+	3349	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	374.71355529352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGTGGGATTTAATGT	NA	False	NA	17	True	ATTAAA	-21	NA	151220259	151240173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
m54284U_201014_093907/81921941/ccs	chr13	+	4236	1	Intergenic	novelGene_7173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGCAAGGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	65457199	65461435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_65457200_65461400
m54284U_201014_093907/82184042/ccs	chr1	+	148	1	Intergenic	novelGene_427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTTTTTTAAAAAAAATCA	NA	False	NA	1	True	NA	NA	NA	160712191	160712339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_160712200_160712300
m54284U_201014_093907/82315118/ccs	chr6	-	1573	5	NNC	ENSMUSG00000030057.16	novel	2178	5	NA	NA	0	-91	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	4595.07249670775	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGACTAAAGTTCCTTT	NA	False	NA	-37	True	AATAAA	-19	NA	87828012	87820154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_87821139_87822103_87822335_87822446_87822540_87822637_87822776_87827885
m54284U_201014_093907/82316103/ccs	chr16	-	188	1	Intergenic	novelGene_8214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGGGAAACCAAGTTTC	NA	False	NA	NA	False	NA	NA	NA	32212873	32212685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32212700_32212900
m54284U_201014_093907/82578240/ccs	chr8	+	180	1	Intergenic	novelGene_4511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAGAGTTGTGATTATGG	NA	False	NA	NA	False	NA	NA	NA	112259470	112259650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112259500_112259600
m54284U_201014_093907/8257847/ccs	chr16	-	189	1	Intergenic	novelGene_8122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGTTGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	18263947	18263758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18263800_18263900
m54284U_201014_093907/82642014/ccs	chr12	+	191	1	Intergenic	novelGene_6837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAACTATTTCCTGAA	NA	False	NA	NA	False	NA	NA	NA	98670893	98671084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_98670900_98671100
m54284U_201014_093907/82643666/ccs	chr1	-	185	1	Intergenic	novelGene_532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTATTTACCAAATCTTA	NA	False	NA	NA	False	NA	NA	NA	182487387	182487202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_182487200_182487400
m54284U_201014_093907/82772236/ccs	chr15	+	166	1	Intergenic	novelGene_7931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAAGGGGACTAA	7271	False	NA	NA	False	NA	NA	NA	97368546	97368712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_97368500_97368700
m54284U_201014_093907/82837594/ccs	chr11	-	2800	12	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	937	junction_7	76.2727814497586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4489	False	NA	-2	True	NA	NA	NA	6217772	6208918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216972_6217417_6217580_6217659
m54284U_201014_093907/82969884/ccs	chr9	+	2115	1	Antisense	novelGene_ENSMUSG00000032015.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	43055711	43057826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_43055700_43057800
m54284U_201014_093907/82970855/ccs	chr12	+	191	1	Intergenic	novelGene_6614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACACCACAGAACTGAGT	NA	False	NA	NA	False	NA	NA	NA	31387347	31387538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_31387300_31387500
m54284U_201014_093907/83100668/ccs	chr2	+	172	1	Intergenic	novelGene_619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	20835312	20835484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_20835300_20835500
m54284U_201014_093907/83101984/ccs	chr8	+	154	1	Intergenic	novelGene_4494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGACAGA	NA	False	NA	NA	False	NA	NA	NA	111817613	111817767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111817600_111817800
m54284U_201014_093907/83102105/ccs	chr8	-	1413	10	NIC	ENSMUSG00000039720.8	novel	1356	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	28.2016547977833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTATGTTCTCCTT	NA	False	NA	-7	True	AATAAA	-17	NA	27713856	27687486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_27687710_27687955_27688099_27688420_27688587_27689294_27689446_27689537_27689631_27689865_27689976_27690260_27690373_27690749_27690932_27692399_27692492_27713715
m54284U_201014_093907/83167662/ccs	chrX	-	2001	11	NIC	ENSMUSG00000035232.9	novel	2115	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	155.054474298551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACCTTGGTTTGAAAGA	NA	False	NA	-2	True	ATTAAA	-33	NA	92875807	92808212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_92808862_92812494_92812635_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
m54284U_201014_093907/83297348/ccs	chr14	-	192	1	Intergenic	novelGene_7333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGCTGGTAAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	8470499	8470307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_8470300_8470500
m54284U_201014_093907/83297699/ccs	chr7	+	3665	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	272.71937860639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2629	False	NA	30	True	AATAAA	-18	NA	13012760	13045350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
m54284U_201014_093907/83362527/ccs	chr8	+	184	1	Intergenic	novelGene_4386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAGAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	86171566	86171750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_86171600_86171800
m54284U_201014_093907/83362957/ccs	chr9	+	4665	21	NIC	ENSMUSG00000042557.15	novel	4845	20	NA	NA	0	-211	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	92.7903416310124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTCTAGCTTCTTGT	NA	False	NA	21	True	ATTAAA	-25	NA	56979323	57035437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_56979348_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
m54284U_201014_093907/83494695/ccs	chr11	-	1782	14	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_10	275.977037892262	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687229	120680026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684713_120685093_120685145_120685728_120685838_120686302_120686550_120687044
m54284U_201014_093907/83624587/ccs	chr13	+	102	1	Intergenic	novelGene_7230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATCTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	91366247	91366349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_91366200_91366300
m54284U_201014_093907/83690182/ccs	chr4	+	5733	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	337.083209662965	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	503	False	NA	17	True	ATTAAA	-27	NA	137321450	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348374_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201014_093907/84082987/ccs	chr9	+	183	1	Intergenic	novelGene_4869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGGTTTGAGTCCTCT	4970	False	NA	NA	False	NA	NA	NA	64298982	64299165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64299000_64299200
m54284U_201014_093907/84083215/ccs	chr2	+	174	1	Intergenic	novelGene_719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGACCAC	NA	False	NA	NA	False	NA	NA	NA	32358826	32359000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_32358800_32359000
m54284U_201014_093907/84149773/ccs	chr15	+	179	1	Intergenic	novelGene_7677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAGATAAGTTG	NA	False	NA	NA	False	NA	NA	NA	35730530	35730709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_35730500_35730700
m54284U_201014_093907/84150046/ccs	chr17	-	3634	10	NNC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	canonical	1	33	junction_9	211.51470193772	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTCTATTGTCCACT	NA	False	NA	NA	False	AATAAA	-31	NA	66175153	66155412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66175053
m54284U_201014_093907/84413266/ccs	chr9	+	5406	29	NNC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	746.404554466659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569719	72657134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644231_72646326_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
m54284U_201014_093907/84476880/ccs	chr2	+	207	1	Intergenic	novelGene_1058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAAAATATAACACTT	NA	False	NA	NA	False	NA	NA	NA	127667397	127667604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_127667400_127667600
m54284U_201014_093907/84672708/ccs	chr10	+	162	1	Intergenic	novelGene_5395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGCAAATCGTGT	7412	False	NA	NA	False	NA	NA	NA	71138962	71139124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_71139000_71139100
m54284U_201014_093907/84673700/ccs	chrX	-	205	1	Intergenic	novelGene_9420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGGTTGATAAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	36030581	36030376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_36030400_36030600
m54284U_201014_093907/85067347/ccs	chr1	+	291	1	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTTAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	34835608	34835899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_34835600_34835900
m54284U_201014_093907/85067822/ccs	chr11	+	175	1	Intergenic	novelGene_5768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGTGTGGCCTT	NA	False	NA	NA	False	NA	NA	NA	33448136	33448311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_33448100_33448300
m54284U_201014_093907/85131461/ccs	chr2	+	2428	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	196.926946409632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119891_130120075_130120211_130120816
m54284U_201014_093907/8520827/ccs	chr12	+	192	1	Intergenic	novelGene_6660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTTCTTTCTATTTT	100	False	NA	NA	False	NA	NA	NA	59070354	59070546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_59070400_59070500
m54284U_201014_093907/85327937/ccs	chrX	-	176	1	Intergenic	novelGene_9713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGAGTGAGTGGGGCC	NA	False	NA	NA	False	NA	NA	NA	161388842	161388666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161388700_161388800
m54284U_201014_093907/85461718/ccs	chr7	+	2044	1	Antisense	novelGene_ENSMUSG00000063511.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45033181	45035225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_45033200_45035200
m54284U_201014_093907/85524599/ccs	chr9	+	4682	27	NNC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	100	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_25	70.5401811718918	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGGCTCCCTCCCC	NA	False	NA	31	True	AATAAA	-35	NA	108367900	108379536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377206_108377289_108377469_108379038
m54284U_201014_093907/85590748/ccs	chr17	+	198	1	Intergenic	novelGene_8452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATTCAGGGCCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	27882410	27882608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27882400_27882600
m54284U_201014_093907/8585249/ccs	chr13	+	204	1	Intergenic	novelGene_7212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCATTGTTTAGCTCTG	NA	False	NA	NA	False	NA	NA	NA	75508674	75508878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_75508700_75508900
m54284U_201014_093907/8586296/ccs	chr5	-	5579	26	NIC	ENSMUSG00000029406.16	novel	6792	26	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	8.21179639299465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCGGCTGCTTCCTTT	8149	False	NA	NA	False	TTTAAA	-6	NA	124387892	124258356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
m54284U_201014_093907/85985881/ccs	chr4	-	176	1	Intergenic	novelGene_1925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGCTTTATACC	4023	False	NA	NA	False	NA	NA	NA	86656186	86656010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_86656000_86656200
m54284U_201014_093907/86049258/ccs	chr7	+	199	1	Intergenic	novelGene_3785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	514	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCTTCCCACCAACAG	NA	False	NA	NA	False	NA	NA	NA	33859263	33859462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_33859300_33859500
m54284U_201014_093907/86115558/ccs	chr17	+	176	1	Intergenic	novelGene_8614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATACTCTTGAAGGG	NA	False	NA	NA	False	NA	NA	NA	46611043	46611219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_46611000_46611200
m54284U_201014_093907/86179949/ccs	chr1	-	6577	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9550	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_40	320.742682661235	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	NA	False	NA	17	True	NA	NA	NA	84827787	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772046_84792543_84792691_84822070_84822113_84827643
m54284U_201014_093907/86771105/ccs	chr15	-	2201	3	NIC	ENSMUSG00000014313.16	novel	503	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	8539	junction_2	141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	-5	True	AATAAA	-18	NA	35938353	35932125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_35932244_35935430_35937431_35938270
m54284U_201014_093907/86835553/ccs	chr7	+	172	1	Intergenic	novelGene_4114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATC	2886	False	NA	NA	False	NA	NA	NA	128191442	128191614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_128191400_128191600
m54284U_201014_093907/86835561/ccs	chr9	-	3278	1	FSM	ENSMUSG00000032299.11	ENSMUST00000213161.2	437	1	-2843	2	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6292	False	NA	-4	True	AATAAA	-15	NA	57065600	57062322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_57062300_57065600
m54284U_201014_093907/86966639/ccs	chr11	-	2053	1	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	300	-9125	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTAGCCCCGGCTGTC	NA	False	NA	NA	False	NA	NA	NA	77784622	77782569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_77782600_77784600
m54284U_201014_093907/86969149/ccs	chr15	-	860	3	NNC	ENSMUSG00000045608.8	novel	477	3	NA	NA	0	368	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	12.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTCTCTCCAAGTTTTAT	NA	False	NA	-11	True	ATTAAA	-16	NA	95530709	95522250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_95522899_95530158_95530347_95530685
m54284U_201014_093907/87032150/ccs	chr11	+	4205	26	NIC	ENSMUSG00000020290.15	novel	4906	26	NA	NA	0	674	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	458.823200808329	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACTCTGGCTTTTGAGA	NA	False	NA	-96	True	NA	NA	NA	23206040	23246907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_23206152_23206645_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
m54284U_201014_093907/87034087/ccs	chr4	+	1792	1	Intergenic	novelGene_2265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAAGCCCTTTTAATGG	NA	False	NA	NA	False	NA	NA	NA	137081852	137083644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_137081900_137083600
m54284U_201014_093907/87100178/ccs	chr2	+	200	1	Intergenic	novelGene_1044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAAGCCTTTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	125641116	125641316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_125641100_125641300
m54284U_201014_093907/87163208/ccs	chr2	-	157	1	Intergenic	novelGene_1137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	153572772	153572615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_153572600_153572800
m54284U_201014_093907/87164049/ccs	chr8	+	158	1	Intergenic	novelGene_4391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	87310142	87310300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_87310100_87310300
m54284U_201014_093907/87230104/ccs	chr19	+	176	1	Intergenic	novelGene_9358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	60856373	60856549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_60856400_60856500
m54284U_201014_093907/87230508/ccs	chr7	+	202	1	Intergenic	novelGene_4041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAAATCCTGCAAGCCA	NA	False	NA	NA	False	NA	NA	NA	115926971	115927173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_115927000_115927200
m54284U_201014_093907/87491806/ccs	chr15	+	176	1	Intergenic	novelGene_7647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGAGGCTGGATCAAG	NA	False	NA	NA	False	NA	NA	NA	12791029	12791205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_12791000_12791200
m54284U_201014_093907/87558866/ccs	chr5	+	187	1	Intergenic	novelGene_2711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATGAGTATTATATATA	NA	False	NA	NA	False	NA	NA	NA	104158913	104159100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_104158900_104159100
m54284U_201014_093907/87753366/ccs	chr17	+	195	1	Intergenic	novelGene_8580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGAATTTGGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	36347650	36347845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_36347600_36347800
m54284U_201014_093907/8783200/ccs	chr6	-	328	3	NIC	ENSMUSG00000057841.6	novel	517	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_1	7052.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785708	115782472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_115782650_115784762_115784864_115785658
m54284U_201014_093907/87950242/ccs	chr11	+	188	1	Intergenic	novelGene_6346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCTGGGTTTGCCAACCT	NA	False	NA	NA	False	NA	NA	NA	101579477	101579665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101579500_101579700
m54284U_201014_093907/87950526/ccs	chr2	+	184	1	Intergenic	novelGene_1107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAGGGCAGGGGCTACT	NA	False	NA	NA	False	NA	NA	NA	148243137	148243321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_148243100_148243300
m54284U_201014_093907/88016630/ccs	chr7	-	185	1	Intergenic	novelGene_4099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATGTTTAATTCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	127066280	127066095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127066100_127066300
m54284U_201014_093907/88080894/ccs	chr1	+	251	1	Intergenic	novelGene_261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	103095245	103095496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_103095200_103095500
m54284U_201014_093907/88081368/ccs	chr2	+	2091	1	NIC	ENSMUSG00000039849.7	novel	611	2	NA	NA	0	-1663	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAGAAAAGAAAAGAAAGAA	5949	False	NA	NA	False	NA	NA	NA	164721276	164723367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_164721300_164723400
m54284U_201014_093907/88146781/ccs	chr2	-	175	1	Intergenic	novelGene_964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	103663037	103662862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_103662900_103663000
m54284U_201014_093907/88147799/ccs	chr17	-	191	1	Intergenic	novelGene_8678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACATCAGCTAATTATT	NA	False	NA	NA	False	NA	NA	NA	66144617	66144426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66144400_66144600
m54284U_201014_093907/88212039/ccs	chr1	-	215	1	Intergenic	novelGene_292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTGAAACAACTATCTTT	NA	False	NA	NA	False	AATAAA	-18	NA	128176705	128176490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_128176500_128176700
m54284U_201014_093907/88213691/ccs	chr5	+	207	1	Intergenic	novelGene_2506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAATGCAGCAAGTATCT	NA	False	NA	NA	False	NA	NA	NA	29888331	29888538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_29888300_29888500
m54284U_201014_093907/88277943/ccs	chr16	-	3122	16	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	73.0161625943188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540772	17469074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
m54284U_201014_093907/88344939/ccs	chr18	+	2434	1	Intergenic	novelGene_8948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAATGGTCTTATATCAT	NA	False	NA	NA	False	NA	NA	NA	46652795	46655229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_46652800_46655200
m54284U_201014_093907/88409968/ccs	chr15	-	174	1	Intergenic	novelGene_7850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	81655366	81655192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81655200_81655400
m54284U_201014_093907/8848019/ccs	chr11	-	3365	1	Genic_Genomic	ENSMUSG00000020477.11	novel	NA	NA	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGGGTCTCTCTCTC	NA	False	NA	-25	True	AATAAA	-18	NA	5657690	5654325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_-_5654300_5657700
m54284U_201014_093907/88736335/ccs	chr1	+	3138	7	NNC	ENSMUSG00000062510.13	novel	4879	6	NA	NA	0	-1911	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	98.5721675840712	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTACTGTATTTTAAGGA	NA	False	NA	21	True	AATAAA	-25	NA	190795220	190816760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_190795470_190797371_190797451_190801452_190801616_190802186_190802318_190803374_190803430_190812685_190812754_190814367
m54284U_201014_093907/88738358/ccs	chr3	-	191	1	Intergenic	novelGene_1629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGTGTGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	108503039	108502848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108502800_108503000
m54284U_201014_093907/88866896/ccs	chr2	+	205	1	Intergenic	novelGene_693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCGCTACCATGCCCC	6111	False	NA	NA	False	NA	NA	NA	30988474	30988679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30988500_30988700
m54284U_201014_093907/88867358/ccs	chrX	-	181	1	Intergenic	novelGene_9416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGATTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	35469651	35469470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_35469500_35469700
m54284U_201014_093907/88999076/ccs	chr7	+	3090	1	Intergenic	novelGene_3965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98577318	98580408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_98577300_98580400
m54284U_201014_093907/89064336/ccs	chr8	+	198	1	Intergenic	novelGene_4582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGATGTAGCTCATACA	545	False	NA	NA	False	NA	NA	NA	124048156	124048354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_124048200_124048400
m54284U_201014_093907/8915659/ccs	chr1	+	377	1	Intergenic	novelGene_159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATAAAGCCACTCTTTG	NA	False	NA	NA	False	NA	NA	NA	63085202	63085579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_63085200_63085600
m54284U_201014_093907/89327895/ccs	chr11	+	1119	6	NIC	ENSMUSG00000020386.6	novel	1201	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	291.41544228129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTTGGGCAGCTGT	3572	False	NA	12	True	AATAAA	-18	NA	51654520	51682752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_51654619_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
m54284U_201014_093907/89456871/ccs	chr7	-	168	1	Intergenic	novelGene_3825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	43916105	43915937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_43915900_43916100
m54284U_201014_093907/89522779/ccs	chr7	+	694	6	NNC	ENSMUSG00000012848.16	novel	794	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	6942.55032678914	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCCTGTGTGCTTGTCT	NA	False	NA	37	True	AATAAA	-23	NA	12656244	12660612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_12656316_12656899_12657009_12659318_12659529_12659701_12659793_12660322_12660422_12660498
m54284U_201014_093907/89655235/ccs	chr12	-	172	1	Intergenic	novelGene_6697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTAATTTTTTACTAG	NA	False	NA	NA	False	AAAAAG	-16	NA	71045651	71045479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71045500_71045700
m54284U_201014_093907/8979072/ccs	chr14	+	196	1	Intergenic	novelGene_7340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGACTCATATTTGATAT	NA	False	NA	NA	False	NA	NA	NA	14295699	14295895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_14295700_14295900
m54284U_201014_093907/8979829/ccs	chr11	+	175	1	Intergenic	novelGene_6300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTCAGAAACTTT	NA	False	NA	NA	False	NA	NA	NA	98231782	98231957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98231800_98232000
m54284U_201014_093907/89981804/ccs	chr19	+	2580	12	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	380.920481495995	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
m54284U_201014_093907/90179884/ccs	chr2	-	186	1	Intergenic	novelGene_699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGCAGAAATAGTCCTC	NA	False	NA	NA	False	NA	NA	NA	31142221	31142035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31142000_31142200
m54284U_201014_093907/90245310/ccs	chr9	+	191	1	Intergenic	novelGene_4643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAATTTATGACTA	NA	False	NA	NA	False	NA	NA	NA	18287177	18287368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_18287200_18287400
m54284U_201014_093907/90245692/ccs	chr16	+	1886	1	Intergenic	novelGene_8171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATCTTAAA	NA	False	NA	NA	False	NA	NA	NA	28740314	28742200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_28740300_28742200
m54284U_201014_093907/9046245/ccs	chr6	+	176	1	Intergenic	novelGene_3484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGACATAAACAA	NA	False	NA	NA	False	NA	NA	NA	122678663	122678839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_122678700_122678800
m54284U_201014_093907/90570871/ccs	chr9	-	194	1	Intergenic	novelGene_4672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCTATATCCTAT	NA	False	NA	NA	False	NA	NA	NA	22227189	22226995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_22227000_22227200
m54284U_201014_093907/90636968/ccs	chr3	-	219	1	Intergenic	novelGene_1706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	138569529	138569310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_138569300_138569500
m54284U_201014_093907/90702697/ccs	chrX	+	180	1	Intergenic	novelGene_9587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATACTGAAAACCTTAA	NA	False	NA	NA	False	NA	NA	NA	102671399	102671579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_102671400_102671600
m54284U_201014_093907/90965096/ccs	chr1	+	225	1	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAGGTTAAAAAAACAAC	8948	False	NA	NA	False	AATAAA	-16	NA	36892245	36892470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36892200_36892500
m54284U_201014_093907/91160722/ccs	chr11	+	215	1	Intergenic	novelGene_5726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTCAAAGAAAAAAAAGCACA	NA	False	NA	NA	False	NA	NA	NA	22484194	22484409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_22484200_22484400
m54284U_201014_093907/91227978/ccs	chr17	+	4016	1	NIC	ENSMUSG00000037104.10	novel	4648	3	NA	NA	25763	-203	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACGTGCAGCGAAGTCT	NA	False	NA	NA	False	TTTAAA	-17	NA	87441048	87445064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87441000_87445100
m54284U_201014_093907/91292961/ccs	chr8	-	172	1	Intergenic	novelGene_4544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTTGTAATGGGAGC	NA	False	NA	NA	False	NA	NA	NA	120315462	120315290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_120315300_120315500
m54284U_201014_093907/91294475/ccs	chr10	+	199	1	Intergenic	novelGene_5249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACCTGCTGCTCTGGCA	NA	False	NA	NA	False	NA	NA	NA	33254321	33254520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_33254300_33254500
m54284U_201014_093907/91357471/ccs	chr2	+	1291	11	ISM	ENSMUSG00000079484.13	ENSMUST00000113645.8	1325	12	98	8	0	0	3prime_fragment	FALSE	canonical	2	39	junction_2	15.9185426468631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTATATGTAC	NA	False	NA	NA	False	AATAAA	-9	NA	30156830	30172152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
m54284U_201014_093907/91359439/ccs	chr11	+	2002	8	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	291	junction_7	24.6386124708717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1582	False	NA	24	True	AATAAA	-15	NA	4136821	4165505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4163044_4163556_4163747_4163836_4163992_4164700
m54284U_201014_093907/91554361/ccs	chr9	+	1125	2	Antisense	novelGene_ENSMUSG00000032473.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTGAGACTCTTAAT	1500	False	NA	NA	False	ATTAAA	-20	NA	99577302	99581843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_99577420_99580835
m54284U_201014_093907/918367/ccs	chr4	+	2857	1	NIC	ENSMUSG00000025791.19	novel	2371	11	NA	NA	53	-54971	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGTCTCTCGAATTTGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	99786663	99789520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_99786700_99789500
m54284U_201014_093907/91947169/ccs	chr4	+	173	1	Intergenic	novelGene_2319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATCTCTTCTCATC	NA	False	NA	NA	False	NA	NA	NA	143055171	143055344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_143055200_143055300
m54284U_201014_093907/91949218/ccs	chr9	+	171	1	Intergenic	novelGene_4865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATCTTAAATTCCT	NA	False	NA	NA	False	NA	NA	NA	64191674	64191845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64191700_64191800
m54284U_201014_093907/92146448/ccs	chr18	-	167	1	Intergenic	novelGene_8971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATATTTATTTATTTATT	264	False	NA	NA	False	NA	NA	NA	61065169	61065002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_61065000_61065200
m54284U_201014_093907/92210223/ccs	chr19	+	185	1	Intergenic	novelGene_9163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTTACATATAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	11900123	11900308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_11900100_11900300
m54284U_201014_093907/92210884/ccs	chr10	+	2016	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	67.9482155762754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1369	False	NA	18	True	TATAAA	-21	NA	81104054	81109070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81104154_81104643_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
m54284U_201014_093907/92341407/ccs	chr5	+	191	1	Intergenic	novelGene_3020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCAGACTGTCGATCC	NA	False	NA	NA	False	NA	NA	NA	140380791	140380982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_140380800_140381000
m54284U_201014_093907/92407325/ccs	chr2	+	5081	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	74.6655808274633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4642	False	NA	12	True	AATAAA	-16	NA	18069446	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201014_093907/92602979/ccs	chr11	-	167	1	Intergenic	novelGene_5888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGAAAATCCCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	60735544	60735377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_60735400_60735500
m54284U_201014_093907/92670185/ccs	chr18	+	753	4	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	3	188	at_least_one_novel_splicesite	FALSE	canonical	3	163	junction_1	1063.7732632265	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGATCTGCTGTGCTTA	NA	False	NA	8	True	AATAAA	-16	NA	80250012	80265741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_80250124_80250368_80250559_80261918_80262023_80265393
m54284U_201014_093907/92800332/ccs	chr12	-	148	1	Intergenic	novelGene_6687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	69733219	69733071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_69733100_69733200
m54284U_201014_093907/93061188/ccs	chr17	+	182	1	Intergenic	novelGene_8410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTTAAAAAATGTAT	6827	False	NA	NA	False	NA	NA	NA	24599972	24600154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_24600000_24600200
m54284U_201014_093907/93260493/ccs	chr14	-	5117	14	NIC	ENSMUSG00000037697.20	novel	3573	15	NA	NA	0	0	intron_retention	TRUE	canonical	1	2	junction_12	40.7780832188802	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGAGTCTCTTGAG	NA	False	NA	-3	True	ATTAAA	-20	NA	45895600	45830630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45866310_45866332_45867036_45867211_45894678
m54284U_201014_093907/93454912/ccs	chr7	+	189	1	Intergenic	novelGene_4030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGAGGAACACAGTGG	4734	False	NA	NA	False	NA	NA	NA	112366373	112366562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_112366400_112366600
m54284U_201014_093907/93522115/ccs	chr10	-	194	1	Intergenic	novelGene_5269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTACCGCCTTTCCTG	NA	False	NA	NA	False	NA	NA	NA	40104651	40104457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_40104500_40104700
m54284U_201014_093907/93716589/ccs	chr14	+	203	1	Intergenic	novelGene_7491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTTCTAGTTTGGTG	NA	False	NA	NA	False	NA	NA	NA	57914651	57914854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_57914700_57914900
m54284U_201014_093907/93717788/ccs	chr2	-	177	1	Intergenic	novelGene_976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAACCCTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	105470666	105470489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_105470500_105470700
m54284U_201014_093907/93849483/ccs	chr6	+	196	1	Intergenic	novelGene_3546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCAGAGCCCGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	134571185	134571381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_134571200_134571400
m54284U_201014_093907/93914054/ccs	chr2	+	176	1	Intergenic	novelGene_659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAAGGTTCCAG	NA	False	NA	NA	False	NA	NA	NA	28937209	28937385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_28937200_28937400
m54284U_201014_093907/93914830/ccs	chr11	-	3137	16	NIC	ENSMUSG00000000751.14	novel	5077	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1486	junction_1	164.566042129664	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCTTTGACTGTAAAG	NA	False	NA	-16	True	AATAAA	-21	NA	75239150	75191175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
m54284U_201014_093907/93981505/ccs	chr13	-	205	1	Intergenic	novelGene_7003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	626	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGCTAGAATATCACC	NA	False	NA	NA	False	NA	NA	NA	28566991	28566786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_28566800_28567000
m54284U_201014_093907/94110065/ccs	chr11	+	189	1	Intergenic	novelGene_5696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGACTTCCCTGATG	NA	False	NA	NA	False	NA	NA	NA	7024643	7024832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_7024600_7024800
m54284U_201014_093907/94177188/ccs	chr18	-	192	1	Intergenic	novelGene_8869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACAGGGTTTTAATCTC	NA	False	NA	NA	False	NA	NA	NA	34438332	34438140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34438100_34438300
m54284U_201014_093907/94438003/ccs	chr11	+	171	1	Intergenic	novelGene_6186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAACATATCCCCA	4889	False	NA	NA	False	NA	NA	NA	88104186	88104357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_88104200_88104400
m54284U_201014_093907/94504782/ccs	chr13	+	175	1	Intergenic	novelGene_7075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAACTTACGAGT	NA	False	NA	NA	False	NA	NA	NA	52360682	52360857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_52360700_52360900
m54284U_201014_093907/94701140/ccs	chr11	-	152	1	Intergenic	novelGene_6165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGTAATAAAAAAAAAAAAAT	5507	False	NA	NA	False	NA	NA	NA	87028902	87028750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87028800_87028900
m54284U_201014_093907/94898844/ccs	chr17	-	175	1	Antisense	novelGene_ENSMUSG00000036368.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTATGCATGAAAGGATAA	NA	False	NA	NA	False	NA	NA	NA	79921459	79921284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_79921300_79921500
m54284U_201014_093907/95094930/ccs	chr9	+	187	1	Intergenic	novelGene_5164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAATATATGCACA	NA	False	NA	NA	False	NA	NA	NA	123662750	123662937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_123662800_123662900
m54284U_201014_093907/95160995/ccs	chr10	+	3545	5	NIC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	0	-1732	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	149.676943782267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2289	False	NA	7	True	AATAAA	-21	NA	71183665	71219983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_71183921_71199279_71199366_71208537_71208711_71212534_71212617_71217034
m54284U_201014_093907/95488485/ccs	chr1	+	230	1	Antisense	novelGene_ENSMUSG00000025968.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATATT	5557	False	NA	NA	False	NA	NA	NA	63184027	63184257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_63184000_63184300
m54284U_201014_093907/95488641/ccs	chr2	-	2477	8	NIC	ENSMUSG00000052406.15	novel	2278	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	69.8298222941506	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGAGTGTGTGGAAGTT	NA	False	NA	-9	True	AATAAA	-11	NA	26854336	26843577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852997_26854063
m54284U_201014_093907/95552446/ccs	chr10	+	188	1	Intergenic	novelGene_5566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTTGGTCATATTTT	NA	False	NA	NA	False	NA	NA	NA	119143777	119143965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_119143800_119144000
m54284U_201014_093907/95683423/ccs	chr12	-	191	1	Intergenic	novelGene_6674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGAGCTTTGTCATCTAG	NA	False	NA	NA	False	NA	NA	NA	68200912	68200721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_68200700_68200900
m54284U_201014_093907/95947287/ccs	chr8	+	170	1	Intergenic	novelGene_4436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAGTAATCAT	NA	False	NA	NA	False	NA	NA	NA	105930149	105930319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_105930100_105930300
m54284U_201014_093907/96142792/ccs	chr2	+	192	1	Intergenic	novelGene_983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTAAAGCACTCCTATC	1926	False	NA	NA	False	NA	NA	NA	110733646	110733838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_110733600_110733800
m54284U_201014_093907/9634112/ccs	chr9	-	2261	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	19.7648678214654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63285184	63071049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63284404
m54284U_201014_093907/96403574/ccs	chr11	+	202	1	Intergenic	novelGene_6014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGAGGAATGGGCATC	5316	False	NA	NA	False	NA	NA	NA	75582448	75582650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75582400_75582600
m54284U_201014_093907/96534667/ccs	chr13	-	5383	8	NIC	ENSMUSG00000021464.16	novel	3985	9	NA	NA	-88	0	intron_retention	FALSE	canonical	3	114	junction_4	4.59369576880387	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTATTATCTCTGGG	NA	False	NA	-28	True	NA	NA	NA	53440248	53263352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_53265705_53267083_53267287_53271170_53273042_53275699_53275828_53284952_53284984_53285785_53286074_53300669_53300748_53439816
m54284U_201014_093907/96537246/ccs	chr9	+	187	1	Intergenic	novelGene_4763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATCGAAAGGACCCAGA	9969	False	NA	NA	False	NA	NA	NA	51666831	51667018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_51666800_51667000
m54284U_201014_093907/96600238/ccs	chr7	-	173	1	Intergenic	novelGene_3966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGCAACGTGAGC	NA	False	NA	NA	False	NA	NA	NA	98899735	98899562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_98899600_98899700
m54284U_201014_093907/96996023/ccs	chr12	+	205	1	Intergenic	novelGene_6538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGAAACAAAGCCAGGT	NA	False	NA	NA	False	NA	NA	NA	3697263	3697468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_3697300_3697500
m54284U_201014_093907/9701079/ccs	chr6	-	202	1	Intergenic	novelGene_3477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTTTTTTGAG	8939	False	NA	NA	False	NA	NA	NA	122594158	122593956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122594000_122594200
m54284U_201014_093907/9701870/ccs	chr9	+	189	1	Intergenic	novelGene_5103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTGCTCTTCCA	5012	False	NA	NA	False	NA	NA	NA	109953291	109953480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_109953300_109953500
m54284U_201014_093907/97059333/ccs	chr11	+	189	1	Intergenic	novelGene_6026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTTAGAAACCAACAGG	6864	False	NA	NA	False	NA	NA	NA	76018998	76019187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76019000_76019200
m54284U_201014_093907/97322674/ccs	chr17	+	250	1	Intergenic	novelGene_8638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTTAAAAGCAAGTTCA	327	False	NA	NA	False	NA	NA	NA	48248177	48248427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_48248200_48248400
m54284U_201014_093907/97518724/ccs	chr6	+	198	1	Intergenic	novelGene_3398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGGTATCTTGTAGTTG	NA	False	NA	NA	False	NA	NA	NA	94391856	94392054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_94391900_94392100
m54284U_201014_093907/97781874/ccs	chr14	-	175	1	Intergenic	novelGene_7587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGGATATTTGGA	NA	False	NA	NA	False	NA	NA	NA	103916546	103916371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_103916400_103916500
m54284U_201014_093907/97847456/ccs	chr12	+	186	1	Intergenic	novelGene_6555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTCTAGATAGAGGATG	NA	False	NA	NA	False	NA	NA	NA	8091114	8091300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_8091100_8091300
m54284U_201014_093907/97912143/ccs	chr11	-	174	1	Intergenic	novelGene_6075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	78891659	78891485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_78891500_78891700
m54284U_201014_093907/97976507/ccs	chr1	+	243	1	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACCAGGCTCTCATAT	NA	False	NA	NA	False	AAAACA	-37	NA	22446158	22446401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_22446200_22446400
m54284U_201014_093907/97977309/ccs	chr8	-	189	1	Intergenic	novelGene_4212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAATCCAGCAA	NA	False	NA	NA	False	NA	NA	NA	14100690	14100501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_14100500_14100700
m54284U_201014_093907/97977480/ccs	chr4	-	3713	13	NIC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	119.580836210862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914396	133857168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133900123_133900192_133914253
m54284U_201014_093907/98238627/ccs	chrX	-	175	1	Intergenic	novelGene_9600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	105003488	105003313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_105003300_105003500
m54284U_201014_093907/98306029/ccs	chr19	-	1548	7	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_5	41.3709506242672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9871	False	NA	-2	True	NA	NA	NA	61215121	61212839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214494_61214638_61214823_61214962
m54284U_201014_093907/98435767/ccs	chr5	+	188	1	Intergenic	novelGene_2532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTGCCCTACCACC	NA	False	NA	NA	False	NA	NA	NA	33012851	33013039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_33012900_33013000
m54284U_201014_093907/98437537/ccs	chr17	+	1058	5	NIC	ENSMUSG00000024181.10	novel	1046	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_2	597.959603568669	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGAGTCCTGTGAGTTC	NA	False	NA	21	True	AGTAAA	-21	NA	26342493	26345587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26342824_26343529_26343693_26344230_26344366_26344451_26344539_26345244
m54284U_201014_093907/98501225/ccs	chr9	-	184	1	Intergenic	novelGene_5020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAGTATGTTTCTTACT	NA	False	NA	NA	False	NA	NA	NA	96955983	96955799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_96955800_96956000
m54284U_201014_093907/98567459/ccs	chr7	+	174	2	Antisense	novelGene_ENSMUSG00000037032.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	85	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105167804	105238278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_105167856_105238155
m54284U_201014_093907/98633975/ccs	chr11	-	217	1	Intergenic	novelGene_5981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTTTCAAAAATACATT	NA	False	NA	NA	False	NA	NA	NA	72608837	72608620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_72608600_72608800
m54284U_201014_093907/98700025/ccs	chr3	+	184	1	Intergenic	novelGene_1641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCTGGAGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	116373875	116374059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_116373900_116374100
m54284U_201014_093907/98829436/ccs	chr6	+	172	1	Intergenic	novelGene_3408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAGAAAGAACTAA	NA	False	NA	NA	False	NA	NA	NA	99283523	99283695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_99283500_99283700
m54284U_201014_093907/98961919/ccs	chr11	+	185	1	Intergenic	novelGene_5995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAGGGAGAAAAA	4827	False	NA	NA	False	NA	NA	NA	74836073	74836258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74836100_74836300
m54284U_201014_093907/99353379/ccs	chr9	+	187	1	Intergenic	novelGene_4868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAGAAAAGAAAAGAAA	5246	False	NA	NA	False	NA	NA	NA	64286848	64287035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64286800_64287000
m54284U_201014_093907/99355403/ccs	chr15	+	175	1	Intergenic	novelGene_7939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	98558060	98558235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98558100_98558200
m54284U_201014_093907/99484703/ccs	chr7	+	175	1	Intergenic	novelGene_3979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATACATAAATAAAT	5327	False	NA	NA	False	NA	NA	NA	100478347	100478522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_100478300_100478500
m54284U_201014_093907/99616001/ccs	chr13	-	453	1	Intergenic	novelGene_7049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	232	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAGTTTTTATCATACT	NA	False	NA	NA	False	NA	NA	NA	45023500	45023047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_45023000_45023500
m54284U_201014_093907/99617501/ccs	chr7	-	878	5	NIC	ENSMUSG00000025102.15	novel	887	5	NA	NA	0	-103	combination_of_known_junctions	FALSE	canonical	3	98	junction_4	83.5852857864349	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTAATGTCAGTTATT	NA	False	NA	-2	True	AGTAAA	-16	NA	81439217	81432032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81438999
m54284U_201014_093907/9963454/ccs	chrX	+	184	1	Intergenic	novelGene_9408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTACATGGGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	20595825	20596009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_20595800_20596000
m54284U_201014_093907/99878610/ccs	chr1	+	2313	1	FSM	ENSMUSG00000092627.3	ENSMUST00000189763.2	3030	1	-34	751	-7	677	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATCGACCCGATTCTT	NA	False	NA	12	True	GATAAA	-19	NA	89857948	89860261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_89857900_89860300
m54284U_201014_093907/99943783/ccs	chr7	-	1589	8	NNC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	369.398905007051	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9163	False	NA	-4	True	ATTAAA	-15	NA	126461041	126451604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126452505_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
m54284U_201015_160726/100008588/ccs	chr11	+	3536	1	FSM	ENSMUSG00002076889.1	ENSMUST00020182364.1	80	1	-2456	-1000	-2456	1000	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGCTGTGTCTT	NA	False	NA	15	True	AATAAA	-33	NA	97917782	97921318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_97917800_97921300
m54284U_201015_160726/100009677/ccs	chr9	+	190	1	Intergenic	novelGene_4741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAGTAAAATTCATGGG	NA	False	NA	NA	False	NA	NA	NA	44832944	44833134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_44832900_44833100
m54284U_201015_160726/100272006/ccs	chr19	+	180	1	Intergenic	novelGene_9296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTATAGACAAGCTCCT	NA	False	NA	NA	False	NA	NA	NA	45455997	45456177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45456000_45456200
m54284U_201015_160726/100337084/ccs	chr16	+	224	1	Intergenic	novelGene_8153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATCCGTGGATTCAAG	3451	False	NA	NA	False	NA	NA	NA	21530915	21531139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_21530900_21531100
m54284U_201015_160726/100467633/ccs	chr5	-	176	1	Intergenic	novelGene_2801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGTTGTTGTTTTGG	8254	False	NA	-1	True	NA	NA	NA	115340702	115340526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115340500_115340700
m54284U_201015_160726/101449774/ccs	chr9	+	311	1	Intergenic	novelGene_5092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGAAAGAAAA	1438	False	NA	NA	False	NA	NA	NA	108833290	108833601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108833300_108833600
m54284U_201015_160726/101450613/ccs	chr3	+	177	1	Intergenic	novelGene_1519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	1699	False	NA	NA	False	NA	NA	NA	89304591	89304768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89304600_89304800
m54284U_201015_160726/101518107/ccs	chr4	+	196	1	Intergenic	novelGene_2144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAAGGCTTACTTTATTG	NA	False	NA	NA	False	NA	NA	NA	129222771	129222967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129222800_129223000
m54284U_201015_160726/101646627/ccs	chr16	+	177	1	Intergenic	novelGene_8192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAAAAAATTCTGTTT	NA	False	NA	NA	False	NA	NA	NA	31501589	31501766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31501600_31501800
m54284U_201015_160726/10226454/ccs	chr19	+	215	1	Intergenic	novelGene_9345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTCTTAAACCATTTA	NA	False	NA	NA	False	NA	NA	NA	56743092	56743307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_56743100_56743300
m54284U_201015_160726/102565913/ccs	chr16	+	156	1	Intergenic	novelGene_8117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTAGAAGAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	18115873	18116029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18115900_18116000
m54284U_201015_160726/102632066/ccs	chr11	+	195	1	Intergenic	novelGene_6497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGATTCTTTTAAAA	NA	False	NA	2	True	NA	NA	NA	118905838	118906033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_118905800_118906000
m54284U_201015_160726/102697727/ccs	chr8	-	396	2	Intergenic	novelGene_4559	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTTATGGTTGTGTGC	NA	False	NA	-8	True	TTTAAA	-23	NA	122106300	122105772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_122106116_122106247
m54284U_201015_160726/102893525/ccs	chr16	+	2466	21	NNC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	71.0679956098383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTGCCTCTCTGCTC	NA	False	NA	4	True	ATTAAA	-13	NA	20367393	20379568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20367496_20367715_20367868_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
m54284U_201015_160726/102893599/ccs	chr8	+	3088	21	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	950	junction_1	72.417038740893	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941204	95041488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
m54284U_201015_160726/103286290/ccs	chr11	+	2551	1	Intergenic	novelGene_6235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGATGGAGTCAT	6425	False	NA	NA	False	NA	NA	NA	95776180	95778731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95776200_95778700
m54284U_201015_160726/103287235/ccs	chr11	+	209	1	Intergenic	novelGene_5721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTTCCTTCTATCTCC	NA	False	NA	NA	False	NA	NA	NA	20398406	20398615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_20398400_20398600
m54284U_201015_160726/103548562/ccs	chr4	-	2818	15	NNC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	38.9337480175474	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	12	True	NA	-6	True	ATTAAA	-16	NA	43010506	43002342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005009_43005206_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
m54284U_201015_160726/104071312/ccs	chr17	+	159	1	Intergenic	novelGene_8528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	32952137	32952296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32952100_32952300
m54284U_201015_160726/104204496/ccs	chr7	+	173	1	Intergenic	novelGene_4040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	115908343	115908516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_115908300_115908500
m54284U_201015_160726/10487885/ccs	chr17	+	188	1	Intergenic	novelGene_8587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAATGTTACATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	37338679	37338867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_37338700_37338900
m54284U_201015_160726/105121995/ccs	chr5	+	213	1	Intergenic	novelGene_2874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACCAGGCTGGCCTCAT	NA	False	NA	NA	False	NA	NA	NA	123010937	123011150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123010900_123011200
m54284U_201015_160726/105187053/ccs	chr12	-	317	1	Intergenic	novelGene_6556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAATGTTGGTTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	8689291	8688974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_8689000_8689300
m54284U_201015_160726/105383425/ccs	chr19	+	188	1	Intergenic	novelGene_9254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTGTTCTGAATTGAT	NA	False	NA	NA	False	NA	NA	NA	41411933	41412121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_41411900_41412100
m54284U_201015_160726/105384793/ccs	chr11	-	191	1	Intergenic	novelGene_6166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGGCCAAGACGAGCA	1726	False	NA	NA	False	NA	NA	NA	87085040	87084849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87084800_87085000
m54284U_201015_160726/105711313/ccs	chr12	+	194	1	Intergenic	novelGene_6931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGAGAATATTTACCCC	NA	False	NA	NA	False	NA	NA	NA	111844508	111844702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111844500_111844700
m54284U_201015_160726/106171072/ccs	chr3	+	173	1	Intergenic	novelGene_1476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATAAAAGTAAATG	1993	False	NA	NA	False	NA	NA	NA	88032871	88033044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88032900_88033000
m54284U_201015_160726/106236730/ccs	chr11	+	965	1	FSM	ENSMUSG00000053613.7	ENSMUST00000151998.2	2659	1	1698	-4	1698	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGGAGCAGGACTGAT	NA	False	NA	NA	False	NA	NA	NA	120551680	120552645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_120551700_120552600
m54284U_201015_160726/106693310/ccs	chr5	-	381	2	Antisense	novelGene_ENSMUSG00000049971.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTTATTTCTCTTGTT	NA	False	NA	-5	True	AATAAA	-17	NA	127760484	127733936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_127734238_127760404
m54284U_201015_160726/106695155/ccs	chr10	+	176	1	FSM	ENSMUSG00000089214.3	ENSMUST00000158589.3	119	1	101	-158	101	158	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACAAAAAAAAAAAAAATTC	NA	False	NA	NA	False	NA	NA	NA	92998747	92998923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_92998700_92998900
m54284U_201015_160726/106760636/ccs	chr12	+	229	1	Intergenic	novelGene_6805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAATACTATGTTATGT	3860	False	NA	NA	False	NA	NA	NA	85033814	85034043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_85033800_85034000
m54284U_201015_160726/107021321/ccs	chr14	-	3897	21	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_19	124.511485413997	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTATTGAGTTGCTGA	2527	False	NA	-11	True	AATACA	-24	NA	99337206	99314705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
m54284U_201015_160726/107413515/ccs	chr14	-	173	1	Intergenic	novelGene_7532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGTTTGGGAA	NA	False	NA	NA	False	NA	NA	NA	70385895	70385722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_70385700_70385900
m54284U_201015_160726/10749053/ccs	chr4	+	3902	1	Antisense	novelGene_ENSMUSG00000078495.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAACCAGCTTATAAGTG	NA	False	NA	NA	False	NA	NA	NA	147858910	147862812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_+_147858900_147862800
m54284U_201015_160726/10750068/ccs	chr4	+	175	1	Intergenic	novelGene_1797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	35010807	35010982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_35010800_35011000
m54284U_201015_160726/107611459/ccs	chr13	+	182	1	Intergenic	novelGene_7147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGTTTAAATAATAGGAT	NA	False	NA	NA	False	NA	NA	NA	62708848	62709030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62708800_62709000
m54284U_201015_160726/108005536/ccs	chr7	+	168	1	Intergenic	novelGene_3827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATCTTTTTTAAGTGG	5342	False	NA	NA	False	NA	NA	NA	44026149	44026317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_44026100_44026300
m54284U_201015_160726/108333275/ccs	chr2	+	181	1	Intergenic	novelGene_1302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAAATTTTTC	NA	False	NA	NA	False	NA	NA	NA	176939858	176940039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_176939900_176940000
m54284U_201015_160726/108396928/ccs	chr4	+	2704	8	NIC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	83.6650269508943	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	False	NA	20	True	AATAAA	-21	NA	128621377	128646674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_128621664_128635708_128635878_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
m54284U_201015_160726/108658829/ccs	chr11	-	154	1	Intergenic	novelGene_6183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAAATAAATATA	NA	False	NA	NA	False	NA	NA	NA	87853853	87853699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87853700_87853900
m54284U_201015_160726/108989140/ccs	chr11	-	209	1	Intergenic	novelGene_6117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGAGGGTCCTTT	NA	False	NA	NA	False	AATGAA	-6	NA	80362124	80361915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80361900_80362100
m54284U_201015_160726/109119311/ccs	chr4	+	176	1	Intergenic	novelGene_2243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTCCGAGACA	NA	False	NA	NA	False	NA	NA	NA	135082293	135082469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_135082300_135082500
m54284U_201015_160726/109316750/ccs	chr12	+	3004	3	Fusion	ENSMUSG00000113234.2_ENSMUSG00000113642.2	novel	1295	3	NA	NA	-177	0	intron_retention	FALSE	canonical	3	7	junction_2	3.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTGTGAGTTTCCT	NA	False	NA	NA	False	AATAAA	-1	NA	18042956	18115611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr12_+_18043260_18111968_18113829_18114770
m54284U_201015_160726/109447673/ccs	chr10	+	1726	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_6	572.02271316356	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4790	False	NA	29	True	ATTAAA	-17	NA	80634469	80640758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80634586_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639349_80639416_80639558_80639653_80639723_80639805
m54284U_201015_160726/109775685/ccs	chr16	+	174	1	Intergenic	novelGene_8275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAGAGAGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	50809939	50810113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_50809900_50810100
m54284U_201015_160726/109903918/ccs	chr16	+	197	1	Intergenic	novelGene_8076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGATGTAGTCACCAA	NA	False	NA	NA	False	NA	NA	NA	13583324	13583521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13583300_13583500
m54284U_201015_160726/110232803/ccs	chr12	+	186	1	Intergenic	novelGene_6713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAATGGTTTCTTG	3124	False	NA	NA	False	NA	NA	NA	73047656	73047842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_73047700_73047800
m54284U_201015_160726/110364603/ccs	chr3	+	195	1	Intergenic	novelGene_1441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGAGCTAATTGGACA	NA	False	NA	NA	False	NA	NA	NA	79320220	79320415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_79320200_79320400
m54284U_201015_160726/110954770/ccs	chr12	+	6178	21	NIC	ENSMUSG00000020594.15	novel	6226	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.0381225204078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGCCTGATTACATCA	NA	False	NA	38	True	GATAAA	-22	NA	8724735	8802581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_8724840_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
m54284U_201015_160726/111020722/ccs	chr7	+	2576	1	Intergenic	novelGene_3826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCACTCCTCAATAGC	2936	False	NA	NA	False	NA	NA	NA	44019229	44021805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_44019200_44021800
m54284U_201015_160726/111084368/ccs	chr19	+	170	1	Intergenic	novelGene_9309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAATTTGTGTGTGTGT	9511	False	NA	NA	False	NA	NA	NA	46118448	46118618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46118400_46118600
m54284U_201015_160726/111085143/ccs	chr6	+	169	1	Intergenic	novelGene_3272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAAAAGTTTT	1869	False	NA	NA	False	NA	NA	NA	52120270	52120439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_52120300_52120400
m54284U_201015_160726/111149502/ccs	chr10	-	152	1	Intergenic	novelGene_5537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	111246579	111246427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_111246400_111246600
m54284U_201015_160726/111608030/ccs	chr14	+	3230	1	FSM	ENSMUSG00000092972.3	ENSMUST00000175231.3	87	1	-453	-2690	-453	2690	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCATCTATAGTTCTTTC	NA	False	NA	21	True	AATAAA	-21	NA	64828180	64831410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_64828200_64831400
m54284U_201015_160726/111739992/ccs	chr4	+	5209	1	Intergenic	novelGene_1857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTTTGTCTTGGTTCCTT	NA	False	NA	17	True	NA	NA	NA	48513813	48519022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_48513800_48519000
m54284U_201015_160726/111805293/ccs	chr8	+	202	1	Intergenic	novelGene_4513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTAAAAATCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	112282385	112282587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112282400_112282600
m54284U_201015_160726/111872538/ccs	chr5	-	173	1	Intergenic	novelGene_2812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	115904554	115904381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115904400_115904600
m54284U_201015_160726/112134778/ccs	chr12	+	3303	17	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_16	146.502346397592	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	736	False	NA	NA	False	ATTAAA	-21	NA	111540956	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
m54284U_201015_160726/112198752/ccs	chr18	+	3745	14	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_3	336.144235032467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695269	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35695346_35704895_35705989_35710610_35710673_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
m54284U_201015_160726/112461556/ccs	chr7	+	4990	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	231.289497377685	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTGAAGGGGTGCAT	7239	False	NA	14	True	AATAAA	-26	NA	109617521	109656091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109617716_109626277_109626356_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653206_109653324_109654223
m54284U_201015_160726/112656501/ccs	chr4	+	4411	5	NNC	ENSMUSG00000063245.12	novel	1275	6	NA	NA	-330307	63394	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	180.911580613293	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGCTGTTTTCAGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	146365110	146806011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_146365259_146697966_146698060_146797298_146797381_146800390_146800518_146802050
m54284U_201015_160726/112658429/ccs	chr5	-	230	1	Intergenic	novelGene_2619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGGAGACCCT	NA	False	NA	NA	False	AATAAA	-18	NA	73637282	73637052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_73637100_73637300
m54284U_201015_160726/11273334/ccs	chr6	-	2886	7	NIC	ENSMUSG00000029735.18	novel	2671	9	NA	NA	-215	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	17.2570436505085	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAATGCTGTGGTATT	NA	False	NA	-6	True	ATTAAA	-19	NA	43603115	43321934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43536876_43536947_43588247_43588320_43602626
m54284U_201015_160726/11274220/ccs	chr11	+	157	1	Intergenic	novelGene_6379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAATAAATCTAAAA	NA	False	NA	NA	False	NA	NA	NA	105331305	105331462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_105331300_105331500
m54284U_201015_160726/112788047/ccs	chr4	+	2039	1	Intergenic	novelGene_1865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAAGGTGTTGTGTTCT	NA	False	NA	NA	False	NA	NA	NA	51877739	51879778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_51877700_51879800
m54284U_201015_160726/112919551/ccs	chr4	+	169	1	Intergenic	novelGene_2409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTTAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	152237169	152237338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_152237200_152237300
m54284U_201015_160726/113117570/ccs	chr17	-	155	1	Intergenic	novelGene_8744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGAAATAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	80608645	80608490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_80608500_80608600
m54284U_201015_160726/11338814/ccs	chr2	+	175	1	Intergenic	novelGene_848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAGAAACTAT	NA	False	NA	NA	False	NA	NA	NA	71156640	71156815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_71156600_71156800
m54284U_201015_160726/113575302/ccs	chr14	+	3345	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_5	90.8951532750173	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	False	NA	25	True	AATAAA	-32	NA	30973459	30981901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
m54284U_201015_160726/113642159/ccs	chr3	-	4053	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	398	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	269.038683915664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	8121	False	NA	99	True	AAAAAG	-18	NA	89955208	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076
m54284U_201015_160726/114165978/ccs	chr2	+	184	1	Intergenic	novelGene_1167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAATAGTATATGCCAAT	NA	False	NA	NA	False	NA	NA	NA	155792524	155792708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155792500_155792700
m54284U_201015_160726/114361760/ccs	chr5	+	209	1	Intergenic	novelGene_2806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAGGATCATCATTGA	7513	False	NA	NA	False	NA	NA	NA	115639558	115639767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115639600_115639800
m54284U_201015_160726/114492740/ccs	chr17	+	2947	13	NNC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_12	9.27773619418492	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAGAAAAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	32725435	32749117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747338_32747690
m54284U_201015_160726/114557600/ccs	chr7	+	348	1	Intergenic	novelGene_3707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAGGAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	24675401	24675749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_24675400_24675700
m54284U_201015_160726/114558401/ccs	chr15	+	185	1	Intergenic	novelGene_7845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTGCTTTATGAAAAC	NA	False	NA	NA	False	NA	NA	NA	81544839	81545024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81544800_81545000
m54284U_201015_160726/114885366/ccs	chr19	+	176	1	Intergenic	novelGene_9198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGAGTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	28311477	28311653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_28311500_28311700
m54284U_201015_160726/115475354/ccs	chr2	-	3533	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	92	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	63.3021063367299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91793910	91763171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765244_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767120_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
m54284U_201015_160726/115542848/ccs	chr17	+	171	1	Intergenic	novelGene_8521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCGGGCGTGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	32466830	32467001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32466800_32467000
m54284U_201015_160726/115671551/ccs	chr3	+	4913	1	Antisense	novelGene_ENSMUSG00000027782.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	68983217	68988130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_68983200_68988100
m54284U_201015_160726/11602454/ccs	chr10	-	182	1	Intergenic	novelGene_5501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAAGTGCAACCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	91053992	91053810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_91053800_91054000
m54284U_201015_160726/116065385/ccs	chr10	+	175	1	Intergenic	novelGene_5488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATAAAAATATCAA	NA	False	NA	NA	False	NA	NA	NA	88199201	88199376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_88199200_88199400
m54284U_201015_160726/116067055/ccs	chr9	-	175	1	Intergenic	novelGene_4920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACCTCCAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	71728858	71728683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_71728700_71728900
m54284U_201015_160726/116720091/ccs	chr16	-	1370	1	NIC	ENSMUSG00000038037.6	novel	2908	2	NA	NA	347	-1577	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACAAAGATTCCTA	NA	False	NA	NA	False	AATAAA	-24	NA	10603053	10601683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_10601700_10603100
m54284U_201015_160726/116851159/ccs	chr7	+	188	1	Intergenic	novelGene_3746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTCAGTGGTGTGAGG	1362	False	NA	NA	False	NA	NA	NA	28384790	28384978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28384800_28385000
m54284U_201015_160726/117442329/ccs	chr9	-	4455	26	NIC	ENSMUSG00000034908.17	novel	4248	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_16	31.9102240669037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGGTGCAGGAG	NA	False	NA	-14	True	AATAAA	-34	NA	45866556	45849154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45858926_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
m54284U_201015_160726/117443051/ccs	chr2	+	183	1	Intergenic	novelGene_898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAAAATATACATAAGG	NA	False	NA	NA	False	NA	NA	NA	84482970	84483153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_84483000_84483200
m54284U_201015_160726/117571770/ccs	chr3	-	162	1	Intergenic	novelGene_1557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	94730255	94730093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_94730100_94730300
m54284U_201015_160726/117836099/ccs	chr8	-	176	1	Intergenic	novelGene_4539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAGAAAAAG	8157	False	NA	NA	False	NA	NA	NA	120107994	120107818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_120107800_120108000
m54284U_201015_160726/118032736/ccs	chr13	-	169	1	Intergenic	novelGene_7309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGGGAGGCTATG	NA	False	NA	NA	False	NA	NA	NA	113185209	113185040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_113185000_113185200
m54284U_201015_160726/118162506/ccs	chr8	+	223	1	Intergenic	novelGene_4245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGTCATCAGTGCT	NA	False	NA	NA	False	NA	NA	NA	26605025	26605248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_26605000_26605200
m54284U_201015_160726/118292922/ccs	chr2	+	157	1	Intergenic	novelGene_635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	3671	False	NA	NA	False	NA	NA	NA	25229094	25229251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_25229100_25229300
m54284U_201015_160726/118948375/ccs	chr3	+	187	1	Intergenic	novelGene_1620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCTTTAATAAATTCCAT	NA	False	NA	NA	False	NA	NA	NA	105518025	105518212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_105518000_105518200
m54284U_201015_160726/119147125/ccs	chr6	+	188	1	Intergenic	novelGene_3403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	97334511	97334699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_97334500_97334700
m54284U_201015_160726/119212001/ccs	chr3	-	4878	7	NIC	ENSMUSG00000027957.14	novel	5725	8	NA	NA	0	-249	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	65.8088562091422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTTCTATATTTCCA	2189	False	NA	-19	True	CATAAA	-9	NA	116505906	116463367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116505731
m54284U_201015_160726/119341137/ccs	chr12	+	156	1	Intergenic	novelGene_6789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATAAATATTTTTA	NA	False	NA	NA	False	NA	NA	NA	83760341	83760497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_83760300_83760500
m54284U_201015_160726/119474682/ccs	chr4	+	191	1	Intergenic	novelGene_2400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCAAATTAGGGGTGTG	5036	False	NA	NA	False	NA	NA	NA	150578551	150578742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_150578600_150578700
m54284U_201015_160726/119605552/ccs	chr7	-	175	1	Intergenic	novelGene_3903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAACAACAAAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	79374151	79373976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79374000_79374200
m54284U_201015_160726/119865374/ccs	chr2	+	170	1	Intergenic	novelGene_957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACAAATAAGATTAAAT	NA	False	NA	NA	False	NA	NA	NA	101643789	101643959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_101643800_101644000
m54284U_201015_160726/120194572/ccs	chr2	+	189	1	Intergenic	novelGene_658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGGGGGGGGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	28759490	28759679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_28759500_28759700
m54284U_201015_160726/120260938/ccs	chr2	-	2864	1	FSM	ENSMUSG00000068267.6	ENSMUST00000089510.5	4886	1	-85	2107	-85	-2107	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCATCCTTCATGGTCT	3081	False	NA	0	True	AATAAA	-45	NA	131022072	131019208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_131019200_131022100
m54284U_201015_160726/120457216/ccs	chr1	-	1843	16	NIC	ENSMUSG00000026245.17	novel	1801	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	338.789767653432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465499	78401721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78465421
m54284U_201015_160726/120457663/ccs	chr7	+	2532	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	59.0536479257068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGGACTTTCAAGGT	NA	False	NA	53	True	AATAAA	-24	NA	67925742	68012835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_67925790_67950580_67950712_67971567_67971654_67999981_68000165_68003356_68003492_68007932_68008037_68010989
m54284U_201015_160726/120521510/ccs	chr19	-	3012	17	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_16	94.3527291603163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCTTTTTTTTTTCC	1659	False	NA	0	True	AATAAA	-21	NA	6014197	5990569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
m54284U_201015_160726/120521884/ccs	chr10	+	197	1	Intergenic	novelGene_5458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGCTTTGAGAAAACTAT	8872	False	NA	NA	False	NA	NA	NA	80949520	80949717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80949500_80949700
m54284U_201015_160726/121703210/ccs	chr5	+	183	1	Intergenic	novelGene_2987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTTACTATCAGGC	7758	False	NA	NA	False	NA	NA	NA	135970707	135970890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_135970700_135970900
m54284U_201015_160726/121834175/ccs	chr2	+	159	1	Intergenic	novelGene_1085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	135953214	135953373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_135953200_135953400
m54284U_201015_160726/122358591/ccs	chr2	+	381	5	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	0	at_least_one_novel_splicesite	FALSE	canonical	3	337	junction_4	128.141523324799	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135488443	135493983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135493417_135493442_135493766
m54284U_201015_160726/122750891/ccs	chr6	-	169	1	Intergenic	novelGene_3364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGGAGATCTTTTAAAA	2969	False	NA	-2	True	NA	NA	NA	86385737	86385568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_86385600_86385700
m54284U_201015_160726/122947359/ccs	chr6	+	174	1	Intergenic	novelGene_3155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCAGATTTCTTATTAAA	NA	False	NA	NA	False	NA	NA	NA	30427079	30427253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_30427100_30427300
m54284U_201015_160726/123469855/ccs	chr14	+	161	1	Intergenic	novelGene_7406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGATGAAGTAC	NA	False	NA	NA	False	NA	NA	NA	42522260	42522421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_42522300_42522400
m54284U_201015_160726/123799983/ccs	chr19	+	176	1	Intergenic	novelGene_9307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAAGACTT	4938	False	NA	NA	False	NA	NA	NA	46008445	46008621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46008400_46008600
m54284U_201015_160726/124323857/ccs	chr10	+	183	1	Intergenic	novelGene_5207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	18232819	18233002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_18232800_18233000
m54284U_201015_160726/124324670/ccs	chr8	+	180	1	Intergenic	novelGene_4239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGTTTTTTGGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	26037479	26037659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_26037500_26037700
m54284U_201015_160726/124520361/ccs	chr13	-	185	1	Intergenic	novelGene_7011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCATTCCCAAATGTTC	NA	False	NA	NA	False	NA	NA	NA	32037250	32037065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_32037100_32037200
m54284U_201015_160726/12452596/ccs	chr16	+	2303	1	Intergenic	novelGene_8051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGCGTGTGTGTCTG	NA	False	NA	NA	False	NA	NA	NA	9057591	9059894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_9057600_9059900
m54284U_201015_160726/12454076/ccs	chr2	+	175	1	Intergenic	novelGene_594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGGGAAGAAAAAAAGA	3284	False	NA	NA	False	NA	NA	NA	11525369	11525544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_11525400_11525500
m54284U_201015_160726/124585705/ccs	chr11	+	195	1	Intergenic	novelGene_6223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATGACAACCGTTGG	NA	False	NA	NA	False	NA	NA	NA	95273455	95273650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95273500_95273600
m54284U_201015_160726/125045274/ccs	chr2	-	178	1	Intergenic	novelGene_996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAGCAAGT	NA	False	NA	NA	False	NA	NA	NA	118840300	118840122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_118840100_118840300
m54284U_201015_160726/125635022/ccs	chr1	+	195	1	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAACATTACATGTG	NA	False	NA	NA	False	NA	NA	NA	12705426	12705621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_12705400_12705600
m54284U_201015_160726/125830882/ccs	chr4	-	3691	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_14	415.714817739976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073685_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201015_160726/125960346/ccs	chrX	-	195	1	Intergenic	novelGene_9518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAAGTACAGTGATTTC	NA	False	NA	NA	False	NA	NA	NA	86194543	86194348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_86194300_86194500
m54284U_201015_160726/126159186/ccs	chr15	-	179	1	Intergenic	novelGene_7643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATCGTTGAATGGCC	NA	False	NA	NA	False	NA	NA	NA	12203623	12203444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_12203400_12203600
m54284U_201015_160726/12649740/ccs	chr19	-	172	1	Intergenic	novelGene_9182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGAAAGGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	22974426	22974254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_22974300_22974400
m54284U_201015_160726/126616503/ccs	chr3	+	197	1	Intergenic	novelGene_1722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCTGTATTCCTGTC	NA	False	NA	NA	False	NA	NA	NA	153595249	153595446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_153595200_153595400
m54284U_201015_160726/127011157/ccs	chr19	+	179	1	Intergenic	novelGene_9099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATATAATAAATATTAAAA	1095	False	NA	NA	False	NA	NA	NA	5451352	5451531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_5451400_5451500
m54284U_201015_160726/127205768/ccs	chr14	+	158	1	Intergenic	novelGene_7501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAATAAAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	61637273	61637431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_61637300_61637400
m54284U_201015_160726/127339066/ccs	chr15	+	180	1	Intergenic	novelGene_7934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTTTTTAAGAGAG	1019	False	NA	NA	False	NA	NA	NA	97870789	97870969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_97870800_97871000
m54284U_201015_160726/127402193/ccs	chr5	-	4183	17	NNC	ENSMUSG00000042216.14	novel	4339	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_16	19.3083531146496	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATAACCGTGGGTCTG	NA	False	NA	-9	True	AATATA	-10	NA	113428467	113391094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113426998_113427132_113427322_113427487_113428192_113428261_113428416
m54284U_201015_160726/127601348/ccs	chr3	+	194	1	Intergenic	novelGene_1544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGGAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	90381901	90382095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_90381900_90382100
m54284U_201015_160726/127797530/ccs	chr5	-	1568	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	0	-440	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	226.339761199839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717138	124708715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711869_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
m54284U_201015_160726/127992851/ccs	chr5	+	5631	1	Intergenic	novelGene_2992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136586547	136592178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_136586500_136592200
m54284U_201015_160726/128060238/ccs	chr8	-	1961	7	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	243.988160004174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419892	110397956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110399274_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201015_160726/12845365/ccs	chr3	+	944	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	0	-214	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	364.828460451697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	51	True	AATAAA	-29	NA	87826842	87830755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87826959_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
m54284U_201015_160726/12845699/ccs	chr16	+	1958	1	FSM	ENSMUSG00000092029.2	ENSMUST00000165914.2	661	1	526	-1823	526	1823	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGACCTTATATAAGCT	NA	False	NA	NA	False	AATAAA	-34	NA	61198144	61200102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_61198100_61200100
m54284U_201015_160726/128714670/ccs	chr15	+	821	1	NIC	ENSMUSG00000016541.11	novel	1937	12	NA	NA	0	-126147	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGCGAGGCTGTCAG	NA	False	NA	13	True	AATAAA	-13	NA	85220445	85221266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_85220400_85221300
m54284U_201015_160726/128975604/ccs	chr10	-	2091	11	NNC	ENSMUSG00000013858.15	novel	2225	11	NA	NA	83	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	37.310722319462	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGTAGTTCCTCAGCTC	NA	False	NA	-17	True	AATAAA	-18	NA	79820081	79812951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814259_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
m54284U_201015_160726/129042410/ccs	chr15	+	2235	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	205	junction_10	42.1345738562714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATATATATATA	7121	False	NA	18	True	NA	NA	NA	76361621	76385178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
m54284U_201015_160726/129238751/ccs	chrX	+	197	1	Intergenic	novelGene_9515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAACAATTAATGAAAG	5809	False	NA	NA	False	NA	NA	NA	75110250	75110447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_75110200_75110400
m54284U_201015_160726/129305388/ccs	chr5	+	182	1	Intergenic	novelGene_3074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAACTTGGTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	146870895	146871077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_146870900_146871100
m54284U_201015_160726/129370659/ccs	chr17	-	2528	9	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	60	1844	multi-exon	FALSE	canonical	3	8	junction_8	87.2431050284204	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37299877	37278242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396_37299673_37299826
m54284U_201015_160726/129631536/ccs	chr15	+	7042	1	FSM	ENSMUSG00000115318.2	ENSMUST00000227474.2	2906	1	0	-4136	0	4136	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTGCTGCTAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	33831593	33838635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_33831600_33838600
m54284U_201015_160726/129632775/ccs	chr9	+	201	1	Intergenic	novelGene_4706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGGGATGCTAGCCT	NA	False	NA	NA	False	NA	NA	NA	36680558	36680759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_36680600_36680800
m54284U_201015_160726/130156764/ccs	chr8	+	174	1	Intergenic	novelGene_4342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGGAAAAGGAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	73315395	73315569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_73315400_73315600
m54284U_201015_160726/130156898/ccs	chr2	-	174	1	Intergenic	novelGene_567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTAAACTTGTTT	NA	False	NA	NA	False	NA	NA	NA	4364001	4363827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_4363800_4364000
m54284U_201015_160726/130352621/ccs	chr4	-	4309	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	-73	-2131	combination_of_known_junctions	FALSE	canonical	2	9	junction_25	11.3804042107475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	-34	True	NA	-15	True	AATAAA	-15	NA	57300829	57192971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300592
m54284U_201015_160726/130419471/ccs	chrX	+	185	1	Intergenic	novelGene_9566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAATCCCTATTTCTGTA	3341	False	NA	NA	False	NA	NA	NA	100771071	100771256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100771100_100771300
m54284U_201015_160726/131073459/ccs	chr11	+	170	1	Intergenic	novelGene_6124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTTTATTTTGTTTTAA	6814	False	NA	NA	False	NA	NA	NA	83183490	83183660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_83183500_83183700
m54284U_201015_160726/131270182/ccs	chr17	+	174	1	Intergenic	novelGene_8553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAAAAGAGGGTTTAA	255	False	NA	NA	False	NA	NA	NA	35400938	35401112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35400900_35401100
m54284U_201015_160726/131467173/ccs	chr2	-	175	1	Intergenic	novelGene_981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCTTCAT	NA	False	NA	NA	False	NA	NA	NA	109731939	109731764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_109731800_109731900
m54284U_201015_160726/131728026/ccs	chr17	-	5203	1	Genic_Genomic	ENSMUSG00000073415.5	novel	NA	NA	NA	NA	-313	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTTTTCTCTTCAAGA	4419	False	NA	NA	False	AATAAA	-18	NA	35201077	35195874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr17_-_35195900_35201100
m54284U_201015_160726/131795383/ccs	chr8	-	170	1	Intergenic	novelGene_4485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCGTCTGTTCATGAT	8953	False	NA	-1	True	NA	NA	NA	111249185	111249015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_111249000_111249200
m54284U_201015_160726/131991487/ccs	chr5	+	188	1	Antisense	novelGene_ENSMUSG00000029401.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAACGAAGC	NA	False	NA	NA	False	NA	NA	NA	124615530	124615718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_124615500_124615700
m54284U_201015_160726/13241045/ccs	chr4	+	2535	1	NIC	ENSMUSG00000028282.13	novel	300	5	NA	NA	0	-13825	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAATAACAAGATCCTGG	2	True	NA	NA	False	NA	NA	NA	32615450	32617985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_32615400_32618000
m54284U_201015_160726/132842231/ccs	chr5	+	189	1	Intergenic	novelGene_2872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGGAGGGCTCACCTG	NA	False	NA	NA	False	NA	NA	NA	122972420	122972609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_122972400_122972600
m54284U_201015_160726/132908127/ccs	chr14	+	4127	10	NIC	ENSMUSG00000053205.10	novel	1730	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	63.4402606131679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGCAATGATTGAGAAG	NA	False	NA	-5	True	ATTAAA	-16	NA	45588678	45614340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45610968
m54284U_201015_160726/132909491/ccs	chr2	+	1197	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	119.474516111177	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	False	NA	37	True	CATAAA	-32	NA	26806392	26810195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808876_26809068_26809203_26809371_26809738
m54284U_201015_160726/133039992/ccs	chr6	+	188	1	Intergenic	novelGene_3215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTAATAGATTTGTTATG	729	False	NA	NA	False	NA	NA	NA	38559684	38559872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38559700_38559900
m54284U_201015_160726/133105564/ccs	chr1	+	2687	3	NIC	ENSMUSG00000066652.6	novel	2473	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1148	junction_2	52	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGAGCGAGTCATCGA	NA	False	NA	21	True	AATAAA	-19	NA	180720672	180726668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_180720999_180721699_180722407_180725014
m54284U_201015_160726/133761321/ccs	chr15	-	145	1	Intergenic	novelGene_7704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAATAAATTAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	48491781	48491636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_48491600_48491800
m54284U_201015_160726/134087784/ccs	chr5	+	173	1	Intergenic	novelGene_2945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	667	False	NA	NA	False	NA	NA	NA	129919225	129919398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_129919200_129919400
m54284U_201015_160726/134220623/ccs	chr11	+	393	1	Intergenic	novelGene_6059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATGGCGGGGGACAT	NA	False	NA	NA	False	NA	NA	NA	77972420	77972813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77972400_77972800
m54284U_201015_160726/134350053/ccs	chr1	+	176	1	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAATTCTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33888549	33888725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_33888500_33888700
m54284U_201015_160726/134480708/ccs	chr4	+	5097	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_13	176.387811370287	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201015_160726/134481989/ccs	chrX	+	203	1	Intergenic	novelGene_9424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGACAGAATCTATGTA	7518	False	NA	NA	False	NA	NA	NA	36344225	36344428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_36344200_36344400
m54284U_201015_160726/134482449/ccs	chr4	+	176	1	Intergenic	novelGene_2296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAATGAAGAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	140564447	140564623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_140564400_140564600
m54284U_201015_160726/134743759/ccs	chr10	-	2188	4	NIC	ENSMUSG00000039810.12	novel	565	5	NA	NA	0	1228	intron_retention	FALSE	canonical	1	1	junction_3	47.5908487935327	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAGTGAAAATTTCTT	NA	False	NA	-15	True	AATAAA	-16	NA	128383643	128379438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_128381408_128382696_128382761_128383039_128383114_128383562
m54284U_201015_160726/134941505/ccs	chr8	+	2727	1	Intergenic	novelGene_4558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTTTCCAAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	122099194	122101921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_122099200_122101900
m54284U_201015_160726/135004323/ccs	chr15	+	670	1	Intergenic	novelGene_7734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	208	False	NA	NA	False	NA	NA	NA	58899783	58900453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_58899800_58900500
m54284U_201015_160726/135138072/ccs	chr9	+	239	1	Intergenic	novelGene_5110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTATCTCTTTAATTAT	NA	False	NA	NA	False	NA	NA	NA	110301453	110301692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_110301500_110301700
m54284U_201015_160726/135332987/ccs	chr11	+	184	1	Intergenic	novelGene_6051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTTTGAAAATTTATTA	NA	False	NA	NA	False	NA	NA	NA	77564837	77565021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77564800_77565000
m54284U_201015_160726/135399693/ccs	chr6	+	201	1	Intergenic	novelGene_3225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCATCTATTTCTTGT	NA	False	NA	NA	False	NA	NA	NA	39477857	39478058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_39477900_39478100
m54284U_201015_160726/135463067/ccs	chr9	-	174	1	Intergenic	novelGene_4772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATAAATCTTT	1148	False	NA	NA	False	NA	NA	NA	53616211	53616037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_53616000_53616200
m54284U_201015_160726/135464102/ccs	chr11	+	186	1	Intergenic	novelGene_5755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCAAATAGTTGTATCTT	NA	False	NA	NA	False	NA	NA	NA	26408671	26408857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_26408700_26408900
m54284U_201015_160726/135594739/ccs	chrX	+	193	1	Intergenic	novelGene_9628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACAATGACACATC	NA	False	NA	NA	False	NA	NA	NA	129455712	129455905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_129455700_129455900
m54284U_201015_160726/135595180/ccs	chr7	+	203	1	Intergenic	novelGene_3842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTCTGACAAAGCAAAC	9549	False	NA	NA	False	AATAAA	-45	NA	45138593	45138796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_45138600_45138800
m54284U_201015_160726/13567725/ccs	chr12	+	2805	1	Antisense	novelGene_ENSMUSG00000035105.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTCGAAAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	54226863	54229668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_+_54226900_54229700
m54284U_201015_160726/135988331/ccs	chr17	+	7572	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	34	junction_30	85.5516104097665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
m54284U_201015_160726/136120112/ccs	chr5	+	189	1	Intergenic	novelGene_3086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGGAGCATA	NA	False	NA	NA	False	NA	NA	NA	148979171	148979360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_148979200_148979400
m54284U_201015_160726/136183963/ccs	chr11	-	189	1	Intergenic	novelGene_6480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGGAGGGCTTAGCCAA	9911	False	NA	NA	False	NA	NA	NA	116670687	116670498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116670500_116670700
m54284U_201015_160726/136184955/ccs	chr2	+	200	1	Intergenic	novelGene_1282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAAAAGAAAATGAGAAT	NA	False	NA	NA	False	NA	NA	NA	170044848	170045048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_170044800_170045000
m54284U_201015_160726/136839880/ccs	chr5	-	243	1	Intergenic	novelGene_2944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGAGGTTTTGGTGAC	6502	False	NA	NA	False	NA	NA	NA	129880959	129880716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129880700_129881000
m54284U_201015_160726/137429044/ccs	chr15	-	2915	17	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	218.645966333134	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATGTTGGTTTTCTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	99549537	99518377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540849_99549387
m54284U_201015_160726/137495881/ccs	chr11	+	2215	11	NNC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	12	junction_10	47.1215449661829	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992513	103003026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_102992615_102993507_102993923_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002364
m54284U_201015_160726/138218329/ccs	chr4	+	7914	1	Intergenic	novelGene_2346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAGTTCTTCTCTGGTA	NA	False	NA	NA	False	NA	NA	NA	146500195	146508109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_146500200_146508100
m54284U_201015_160726/138480257/ccs	chr1	-	4805	1	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	-596	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134278639	134273834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_134273800_134278600
m54284U_201015_160726/138742176/ccs	chr19	-	1297	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	380.445937172565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	-4	True	NA	-6	True	AGTAAA	-15	NA	46327141	46318982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46326751_46326860_46326958
m54284U_201015_160726/138871836/ccs	chr10	+	176	1	Intergenic	novelGene_5412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75679958	75680134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75680000_75680100
m54284U_201015_160726/13959307/ccs	chr15	-	3278	6	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	-54	0	intron_retention	FALSE	canonical	3	16	junction_2	208.900550501908	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816907	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79802675_79802953_79803129_79805572_79805640_79807672_79807739_79814786_79814831_79816648
m54284U_201015_160726/13961562/ccs	chr1	+	3311	17	NIC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_7	60.2348269276172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	7308	False	NA	23	True	AATAAA	-32	NA	87683797	87720150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
m54284U_201015_160726/140511465/ccs	chr11	+	202	1	Intergenic	novelGene_6364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATTCAACCAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	103846371	103846573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_103846400_103846600
m54284U_201015_160726/140576149/ccs	chr11	+	173	1	Intergenic	novelGene_5775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAATTCATATGA	NA	False	NA	NA	False	NA	NA	NA	34726540	34726713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_34726500_34726700
m54284U_201015_160726/140708138/ccs	chr8	-	177	1	Intergenic	novelGene_4592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATTGAACCACAGAA	NA	False	NA	NA	False	NA	NA	NA	124596359	124596182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124596200_124596400
m54284U_201015_160726/14092546/ccs	chrX	+	190	1	Intergenic	novelGene_9489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTGTTGGTTGAAAAT	NA	False	NA	NA	False	NA	NA	NA	70204136	70204326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_70204100_70204300
m54284U_201015_160726/14093117/ccs	chr7	+	177	1	Intergenic	novelGene_3888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	69883519	69883696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_69883500_69883700
m54284U_201015_160726/141166676/ccs	chr10	+	178	1	Intergenic	novelGene_5192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCCTCAAAGAA	2579	False	NA	NA	False	NA	NA	NA	11152060	11152238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_11152100_11152200
m54284U_201015_160726/141494831/ccs	chr14	-	182	1	Intergenic	novelGene_7434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGGATGTCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	51161035	51160853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_51160900_51161000
m54284U_201015_160726/141623790/ccs	chr11	-	1796	11	NIC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	448	junction_10	70.356307464221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	-21	True	AGTAAA	-16	NA	101308232	101297664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302824_101304762_101304923_101307928_101308061_101308175
m54284U_201015_160726/142344652/ccs	chr9	+	1031	4	NIC	ENSMUSG00000032381.6	novel	1240	5	NA	NA	159	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	323.837750870538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTCACCTTAGGTTTT	1542	False	NA	17	True	AATAAA	-18	NA	66034051	66046237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_66034253_66039808_66039974_66043583_66043630_66045618
m54284U_201015_160726/142608714/ccs	chr10	-	189	1	Intergenic	novelGene_5229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAATGCTGTTAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	23714875	23714686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_23714700_23714900
m54284U_201015_160726/142934609/ccs	chr12	+	3492	11	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	704.792026061589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504649	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111504674_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
m54284U_201015_160726/143132196/ccs	chr16	-	1723	2	NIC	ENSMUSG00000043391.11	novel	1695	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGGGTCTCCTGTTTGCT	NA	False	NA	3	True	AATAAA	-30	NA	21513415	21495471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_21496745_21512965
m54284U_201015_160726/143525186/ccs	chr5	+	373	1	Intergenic	novelGene_2889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	162	False	NA	NA	False	NA	NA	NA	123809803	123810176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123809800_123810200
m54284U_201015_160726/14352909/ccs	chr10	+	185	1	Intergenic	novelGene_5191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGTGTATTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	8822013	8822198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_8822000_8822200
m54284U_201015_160726/14353193/ccs	chr7	+	194	1	Intergenic	novelGene_3857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTGCATTCCAGTC	NA	False	NA	NA	False	NA	NA	NA	48401423	48401617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_48401400_48401600
m54284U_201015_160726/14354133/ccs	chr2	-	1206	4	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	0	-2235	multi-exon	FALSE	canonical	3	14	junction_1	148.996644257513	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTCTTCCTTTTTTT	NA	False	NA	0	True	NA	NA	NA	177090113	176919500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_-_176920428_177081219_177081347_177086489_177086545_177090016
m54284U_201015_160726/143788852/ccs	chr7	+	228	1	Intergenic	novelGene_3808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCAGAATTGTGAGAAATAA	NA	False	NA	NA	False	AAAAAG	-24	NA	41702242	41702470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_41702200_41702500
m54284U_201015_160726/144573492/ccs	chr3	+	198	1	Intergenic	novelGene_1482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAAAAGTCGGCCAGG	NA	False	NA	NA	False	NA	NA	NA	88186376	88186574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88186400_88186600
m54284U_201015_160726/144769276/ccs	chr8	-	1595	1	Genic_Genomic	ENSMUSG00000036840.6	novel	NA	NA	NA	NA	20407	74	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTTTACTTTAGC	NA	False	NA	NA	False	ATTAAA	-25	NA	87452155	87450560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_-_87450600_87452200
m54284U_201015_160726/144968338/ccs	chr2	+	179	1	Intergenic	novelGene_1124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAATCTTAAAAAAAA	7642	False	NA	NA	False	NA	NA	NA	152250984	152251163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_152251000_152251200
m54284U_201015_160726/145031304/ccs	chr7	+	3504	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	3307	junction_7	396.070775457616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758078	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201015_160726/145491432/ccs	chr2	-	184	1	Intergenic	novelGene_1092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGTCCCATTGG	NA	False	NA	NA	False	AATAAA	-6	NA	141019414	141019230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_141019200_141019400
m54284U_201015_160726/145557186/ccs	chr16	+	178	1	Intergenic	novelGene_8173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29442388	29442566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_29442400_29442600
m54284U_201015_160726/146279211/ccs	chr9	+	167	1	Intergenic	novelGene_4826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCCTGCTGCTGTTGGA	NA	False	NA	NA	False	NA	NA	NA	59419134	59419301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59419100_59419300
m54284U_201015_160726/146343700/ccs	chr12	+	2269	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	-51	intron_retention	FALSE	canonical	3	5416	junction_8	460.290244709792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758239	24764094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761802_24762659_24762765_24762859_24762974_24763078
m54284U_201015_160726/146473166/ccs	chr2	+	174	1	Intergenic	novelGene_952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAGAGGTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	93846819	93846993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_93846800_93847000
m54284U_201015_160726/146475256/ccs	chr12	-	176	1	Intergenic	novelGene_6537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTAAATCTACTTT	9361	False	NA	NA	False	NA	NA	NA	3681795	3681619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_3681600_3681800
m54284U_201015_160726/146538640/ccs	chr9	+	3525	21	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_1	42.6432878657357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6630	False	NA	19	True	AATAAA	-19	NA	21232043	21266324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
m54284U_201015_160726/146737690/ccs	chr19	-	3317	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-101	-152	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_24	173.05341480306	808	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTAGAATATTTTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	37340111	37247980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339916
m54284U_201015_160726/146737862/ccs	chr9	+	192	1	Intergenic	novelGene_4879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGATAATATA	NA	False	NA	NA	False	NA	NA	NA	65164101	65164293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_65164100_65164300
m54284U_201015_160726/146737963/ccs	chr4	+	181	1	Intergenic	novelGene_2089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAACTGGGTTTACTTTT	NA	False	NA	NA	False	NA	NA	NA	123553457	123553638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_123553500_123553600
m54284U_201015_160726/147327702/ccs	chr2	-	170	1	Intergenic	novelGene_1025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	121222285	121222115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_121222100_121222300
m54284U_201015_160726/147457692/ccs	chr8	+	208	1	Intergenic	novelGene_4467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGCCTATAAATAAAGTT	NA	False	NA	NA	False	NA	NA	NA	107760467	107760675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_107760500_107760700
m54284U_201015_160726/147654152/ccs	chr3	-	173	1	Intergenic	novelGene_1467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAATGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	86947258	86947085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_86947100_86947300
m54284U_201015_160726/147654515/ccs	chr19	+	261	1	Intergenic	novelGene_9266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATAACAACAGTTCCCC	4601	False	NA	NA	False	NA	NA	NA	42073313	42073574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_42073300_42073600
m54284U_201015_160726/147784655/ccs	chr5	+	172	1	Intergenic	novelGene_2571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAAGGTCTGGTGA	NA	False	NA	NA	False	NA	NA	NA	52188385	52188557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_52188400_52188600
m54284U_201015_160726/147849981/ccs	chr17	-	729	4	NIC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	0	-2550	combination_of_known_splicesites	FALSE	canonical	3	127	junction_3	3501.83516967255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367775	6360818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_6361219_6361567_6361646_6361983_6362108_6367648
m54284U_201015_160726/148048317/ccs	chr12	+	222	1	Intergenic	novelGene_6572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTCAGAATCATAGAT	NA	False	NA	NA	False	AAAAAG	-11	NA	16517860	16518082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_16517900_16518100
m54284U_201015_160726/14813898/ccs	chr5	+	196	1	Intergenic	novelGene_2922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTTATCTGTATGTG	5205	False	NA	NA	False	NA	NA	NA	125537747	125537943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_125537700_125537900
m54284U_201015_160726/148375374/ccs	chr5	+	2015	5	NNC	ENSMUSG00000039917.11	novel	4363	5	NA	NA	0	-381	intron_retention	FALSE	canonical	2	18	junction_2	110.212011595833	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGTGGCATACTG	NA	False	NA	15	True	TATAAA	-19	NA	135661557	135673000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_135661773_135663957_135664082_135664848_135665257_135667943_135668095_135671883
m54284U_201015_160726/148506898/ccs	chr9	+	176	1	Intergenic	novelGene_4955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGCCTTTAATAT	NA	False	NA	NA	False	NA	NA	NA	77075508	77075684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_77075500_77075700
m54284U_201015_160726/148702811/ccs	chr12	+	181	1	Intergenic	novelGene_6722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75663418	75663599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_75663400_75663600
m54284U_201015_160726/148965770/ccs	chr18	+	158	1	Intergenic	novelGene_9037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGACAAA	5417	False	NA	NA	False	NA	NA	NA	77805609	77805767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_77805600_77805800
m54284U_201015_160726/14943313/ccs	chr4	+	3422	1	Intergenic	novelGene_1731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGGTCGCGTCGTTC	NA	False	NA	NA	False	NA	NA	NA	8133526	8136948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_8133500_8136900
m54284U_201015_160726/149489390/ccs	chr2	+	122	1	Intergenic	novelGene_1268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	168657307	168657429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168657300_168657400
m54284U_201015_160726/150079876/ccs	chr6	+	2350	18	NNC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	213.903092244998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	8	True	NA	NA	NA	40302420	40373696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331687_40331742_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
m54284U_201015_160726/150143445/ccs	chr2	+	183	1	Intergenic	novelGene_1135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAACTCAAAACTCAA	NA	False	NA	NA	False	NA	NA	NA	153404911	153405094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_153404900_153405100
m54284U_201015_160726/150471272/ccs	chr2	+	175	1	Intergenic	novelGene_663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	29018269	29018444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_29018300_29018400
m54284U_201015_160726/150538002/ccs	chr6	-	183	1	Intergenic	novelGene_3304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGCTC	NA	False	NA	NA	False	NA	NA	NA	67132149	67131966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_67132000_67132100
m54284U_201015_160726/151258789/ccs	chr15	+	183	1	FSM	ENSMUSG00000079242.3	ENSMUST00000168646.2	1280	1	904	193	904	-193	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAAGCCTAGGGAGTG	NA	False	NA	NA	False	NA	NA	NA	89314695	89314878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_89314700_89314900
m54284U_201015_160726/151388676/ccs	chr3	-	176	1	Intergenic	novelGene_1650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAGTACATTAAA	NA	False	NA	NA	False	NA	NA	NA	121006104	121005928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_121005900_121006100
m54284U_201015_160726/151388847/ccs	chr18	+	181	1	Intergenic	novelGene_8902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTGATTGACTTTTATG	2790	False	NA	NA	False	NA	NA	NA	36016112	36016293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_36016100_36016300
m54284U_201015_160726/15140511/ccs	chr6	+	1299	1	Intergenic	novelGene_3552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCAAAAAAAACCCTAA	3407	False	NA	NA	False	NA	NA	NA	134861791	134863090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_134861800_134863100
m54284U_201015_160726/151718478/ccs	chr17	+	172	1	Intergenic	novelGene_8519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32353854	32354026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32353900_32354000
m54284U_201015_160726/152175566/ccs	chr12	+	2182	7	NNC	ENSMUSG00000021096.12	novel	1103	3	NA	NA	-23140	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	166.029113912791	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCATGTATGCGTGAT	NA	False	NA	NA	False	AATAAA	-23	NA	72781088	72841338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_72781169_72782668_72782779_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
m54284U_201015_160726/152439326/ccs	chr18	+	822	5	NNC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	3	188	at_least_one_novel_splicesite	FALSE	canonical	3	163	junction_1	910.17041673524	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGATCTGCTGTGCTTA	NA	False	NA	8	True	AATAAA	-16	NA	80250012	80265741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_80250124_80250368_80250559_80253276_80253346_80261918_80262023_80265393
m54284U_201015_160726/152635001/ccs	chr3	-	1759	1	FSM	ENSMUSG00000037096.7	ENSMUST00000036976.7	444	1	-417	-898	-417	898	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTTAAATGCCATCAGA	NA	False	NA	NA	False	NA	NA	NA	78874523	78872764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_78872800_78874500
m54284U_201015_160726/153290240/ccs	chr3	+	3239	1	Antisense	novelGene_ENSMUSG00000040209.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGGTTTAGTGGGACTG	NA	False	NA	3	True	NA	NA	NA	9673832	9677071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_9673800_9677100
m54284U_201015_160726/153354484/ccs	chr5	-	173	1	Intergenic	novelGene_2835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGATTTATTTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	119717000	119716827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_119716800_119717000
m54284U_201015_160726/153420151/ccs	chr11	+	203	1	Intergenic	novelGene_5952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGAGTTCCAGGACAG	NA	False	NA	NA	False	NA	NA	NA	69752625	69752828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69752600_69752800
m54284U_201015_160726/153420202/ccs	chr6	-	3125	10	NIC	ENSMUSG00000004267.17	novel	2491	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_9	9.41629792788369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCCTTGTCTGAGGAC	9989	False	NA	-6	True	ATTAAA	-17	NA	124746513	124737327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124738326_124738610_124738670_124739615_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
m54284U_201015_160726/153881282/ccs	chr2	+	1584	1	Intergenic	novelGene_576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTTAATGCTTTTGCT	NA	False	NA	NA	False	AAGAAA	-11	NA	5823093	5824677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_5823100_5824700
m54284U_201015_160726/154075663/ccs	chr9	+	4257	1	Intergenic	novelGene_4980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTCATGATATTATTTA	NA	False	NA	NA	False	NA	NA	NA	82816849	82821106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_82816800_82821100
m54284U_201015_160726/154402896/ccs	chr10	+	170	1	Intergenic	novelGene_5245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31281188	31281358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_31281200_31281400
m54284U_201015_160726/154469847/ccs	chr3	-	179	1	Intergenic	novelGene_1505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTATTTTAAATGAT	NA	False	NA	NA	False	NA	NA	NA	88854246	88854067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88854100_88854200
m54284U_201015_160726/154601001/ccs	chr11	+	154	1	Antisense	novelGene_ENSMUSG00000086919.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAAAGAAGCA	551	False	NA	NA	False	NA	NA	NA	89016093	89016247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_89016100_89016200
m54284U_201015_160726/154797515/ccs	chr16	+	176	1	Intergenic	novelGene_8280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAACAACTAAC	NA	False	NA	NA	False	NA	NA	NA	55702213	55702389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_55702200_55702400
m54284U_201015_160726/154863681/ccs	chr19	-	2996	1	Genic_Genomic	ENSMUSG00000059326.8	novel	NA	NA	NA	NA	156	-128	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAATAAAAGAAAAG	9909	False	NA	NA	False	NA	NA	NA	61215518	61212522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_61212500_61215500
m54284U_201015_160726/155126529/ccs	chr18	-	1830	5	NNC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	0	7756	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	93.7469999519985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTTGTCAACTTACAG	NA	False	NA	NA	False	AATATA	-45	NA	68433273	68401231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412622_68433144
m54284U_201015_160726/155845588/ccs	chrX	+	188	1	Intergenic	novelGene_9364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGCAACAACAACAAAAAAC	69	False	NA	NA	False	NA	NA	NA	7577577	7577765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_7577600_7577800
m54284U_201015_160726/156173332/ccs	chr17	-	4453	6	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	206	junction_5	1893.37229302639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTTGTTGCATTATCAT	3828	False	NA	NA	False	AATAAA	-14	NA	25493276	25480889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25481466_25483739_25483820_25484092_25487588_25488165_25488250_25488376_25488454_25493135
m54284U_201015_160726/156502356/ccs	chr2	+	190	1	Intergenic	novelGene_850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGATAAACCTTGCCA	2029	False	NA	NA	False	NA	NA	NA	71216514	71216704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_71216500_71216700
m54284U_201015_160726/156894346/ccs	chrX	+	184	1	Intergenic	novelGene_9558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGTGCACCGCCATGC	NA	False	NA	NA	False	NA	NA	NA	100477592	100477776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100477600_100477800
m54284U_201015_160726/157223368/ccs	chr5	+	230	1	Intergenic	novelGene_3057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTTATTA	NA	False	NA	NA	False	TTTAAA	-12	NA	144660973	144661203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_144661000_144661200
m54284U_201015_160726/157419257/ccs	chr7	-	3347	1	NIC	ENSMUSG00000040435.13	novel	2333	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTCTTACGTGTGTTC	3861	False	NA	39	True	AATAAA	-19	NA	45175692	45172345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45172300_45175700
m54284U_201015_160726/157877020/ccs	chr17	-	167	1	Intergenic	novelGene_8383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTTAATTTCAT	NA	False	NA	NA	False	NA	NA	NA	17184878	17184711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_17184700_17184900
m54284U_201015_160726/157877923/ccs	chr14	+	275	1	Intergenic	novelGene_7604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAATTTTGTGTGGGT	NA	False	NA	NA	False	NA	NA	NA	122497600	122497875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_122497600_122497900
m54284U_201015_160726/157944428/ccs	chr8	+	175	1	Intergenic	novelGene_4603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATATATTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125661510	125661685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_125661500_125661700
m54284U_201015_160726/15794927/ccs	chr3	-	174	1	Intergenic	novelGene_1515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTT	1940	False	NA	NA	False	NA	NA	NA	89100078	89099904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89099900_89100100
m54284U_201015_160726/158009230/ccs	chr3	+	199	1	Intergenic	novelGene_1719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTTGTAAGTGTGCACCTG	4334	False	NA	NA	False	NA	NA	NA	152925487	152925686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_152925500_152925700
m54284U_201015_160726/158140250/ccs	chr2	+	191	1	Intergenic	novelGene_723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGGAGAGGCAAACAC	743	False	NA	NA	False	NA	NA	NA	32588375	32588566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_32588400_32588600
m54284U_201015_160726/158205590/ccs	chr11	-	1864	9	NIC	ENSMUSG00000042709.16	novel	1813	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	136.995209770269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	False	NA	-12	True	NA	NA	NA	60307877	60291463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60302492_60302556_60307576
m54284U_201015_160726/158205745/ccs	chr16	+	202	1	Intergenic	novelGene_8087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTTCATTCACAAATGA	NA	False	NA	NA	False	NA	NA	NA	15401555	15401757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_15401600_15401800
m54284U_201015_160726/158337457/ccs	chr1	+	173	1	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTTTTTTAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	9777920	9778093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_9777900_9778100
m54284U_201015_160726/158402074/ccs	chr19	+	186	1	Intergenic	novelGene_9078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAGATTTATTTAGCTG	5267	False	NA	NA	False	NA	NA	NA	4145572	4145758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4145600_4145800
m54284U_201015_160726/15861876/ccs	chr15	+	186	1	Intergenic	novelGene_7869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGGGTGGGCCCAAAGAG	NA	False	NA	NA	False	NA	NA	NA	83062401	83062587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_83062400_83062600
m54284U_201015_160726/15862415/ccs	chr10	-	180	1	Intergenic	novelGene_5549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATCATATTGAAA	NA	False	NA	NA	False	NA	NA	NA	116866085	116865905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_116865900_116866100
m54284U_201015_160726/158924960/ccs	chr13	+	182	1	Intergenic	novelGene_7197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTTGATTCTACCGG	NA	False	NA	NA	False	NA	NA	NA	69719672	69719854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_69719700_69719900
m54284U_201015_160726/159056087/ccs	chr5	+	180	1	Intergenic	novelGene_3033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGAAATAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	142547413	142547593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_142547400_142547600
m54284U_201015_160726/159057485/ccs	chr1	+	169	1	Intergenic	novelGene_266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111478218	111478387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_111478200_111478400
m54284U_201015_160726/159253018/ccs	chr2	-	186	2	Intergenic	novelGene_1243	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	254	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGATAAAGATGGA	NA	False	NA	NA	False	AATAAA	-7	NA	166853939	166849894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166850032_166853890
m54284U_201015_160726/159516284/ccs	chr4	+	199	1	Intergenic	novelGene_2299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCGGAGGCATGATTGC	NA	False	NA	NA	False	NA	NA	NA	140681938	140682137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_140681900_140682100
m54284U_201015_160726/159517121/ccs	chr1	+	265	1	Intergenic	novelGene_147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAGAAAAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	59942583	59942848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_59942600_59942800
m54284U_201015_160726/159647045/ccs	chr4	-	4215	17	NNC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_16	145.862520888678	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCATTTGTTGGGGC	8387	False	NA	1	True	ATTAAA	-22	NA	133080792	133019769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029136_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096_133080261_133080600
m54284U_201015_160726/159844083/ccs	chr18	+	186	1	Intergenic	novelGene_9061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGAAATACTCACTTG	NA	False	NA	NA	False	NA	NA	NA	89969303	89969489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_89969300_89969500
m54284U_201015_160726/160236712/ccs	chr11	+	215	1	Intergenic	novelGene_5784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTGAGGGGTTAGTTTT	NA	False	NA	NA	False	AAAAAG	-16	NA	43710904	43711119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_43710900_43711100
m54284U_201015_160726/160368861/ccs	chr5	+	1339	1	Antisense	novelGene_ENSMUSG00000079173.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	137399529	137400868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_137399500_137400900
m54284U_201015_160726/160434865/ccs	chr15	+	173	1	Intergenic	novelGene_7702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATTAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	45515050	45515223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_45515000_45515200
m54284U_201015_160726/160827017/ccs	chr5	+	198	1	Intergenic	novelGene_2553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	457	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACTTTTTCATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	34738580	34738778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_34738600_34738800
m54284U_201015_160726/160892025/ccs	chr5	+	185	1	Intergenic	novelGene_2699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGAATAGTAAT	NA	False	NA	NA	False	NA	NA	NA	100985422	100985607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_100985400_100985600
m54284U_201015_160726/160958869/ccs	chr2	+	2887	1	Antisense	novelGene_ENSMUSG00000027010.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATATTTAAGATACCT	NA	False	NA	NA	False	ACTAAA	-12	NA	71140821	71143708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_71140800_71143700
m54284U_201015_160726/161219734/ccs	chr10	+	189	1	Intergenic	novelGene_5251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAGGCAGTGGTAACAC	NA	False	NA	NA	False	NA	NA	NA	33588536	33588725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_33588500_33588700
m54284U_201015_160726/161284231/ccs	chr11	+	198	1	Intergenic	novelGene_5957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATAGCCCCGTCTGACA	NA	False	NA	NA	False	NA	NA	NA	70160192	70160390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_70160200_70160400
m54284U_201015_160726/161482573/ccs	chr3	+	518	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	-29	-64	-29	64	mono-exon	FALSE	NA	NA	NA	NA	NA	1247	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTGGAATAGGATTG	7635	False	NA	NA	False	AATAAA	-30	NA	37768859	37769377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_37768900_37769400
m54284U_201015_160726/161612567/ccs	chr8	+	3578	1	NIC	ENSMUSG00000031669.11	novel	2519	3	NA	NA	-44	-1146	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGTAAATTATACACA	NA	False	NA	NA	False	NA	NA	NA	96360137	96363715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_96360100_96363700
m54284U_201015_160726/162005390/ccs	chr17	+	178	1	Intergenic	novelGene_8484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATAAGTACACCG	5013	False	NA	NA	False	NA	NA	NA	29332118	29332296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29332100_29332300
m54284U_201015_160726/162530956/ccs	chr5	-	2014	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	468	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	680.72819541507	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527112	117517213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525494_117525759_117525933_117525999_117526981
m54284U_201015_160726/162726946/ccs	chr16	+	176	1	Intergenic	novelGene_8255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAGACGCTA	NA	False	NA	NA	False	NA	NA	NA	38753032	38753208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_38753000_38753200
m54284U_201015_160726/162859719/ccs	chr6	+	203	1	Genic_Genomic	ENSMUSG00000052738.15	novel	NA	NA	NA	NA	2505	16	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACACTCCACTTAGGCA	NA	False	NA	NA	False	NA	NA	NA	73239847	73240050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr6_+_73239800_73240000
m54284U_201015_160726/162922852/ccs	chr11	-	192	1	Intergenic	novelGene_6281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	8211	False	NA	NA	False	NA	NA	NA	97539002	97538810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97538800_97539000
m54284U_201015_160726/16321295/ccs	chr15	+	586	2	Intergenic	novelGene_7680	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTAGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	36560542	36566201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_36560637_36565709
m54284U_201015_160726/163645143/ccs	chr5	+	181	1	Intergenic	novelGene_2847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAATTAGACCTTA	NA	False	NA	2	True	NA	NA	NA	121351487	121351668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_121351500_121351700
m54284U_201015_160726/163646036/ccs	chr12	+	178	1	Intergenic	novelGene_6872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGTGAAATGCT	NA	False	NA	NA	False	NA	NA	NA	105394376	105394554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105394400_105394600
m54284U_201015_160726/163776219/ccs	chr16	+	190	1	Intergenic	novelGene_8199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGTCCTTACTCAGA	NA	False	NA	NA	False	NA	NA	NA	31828261	31828451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31828300_31828500
m54284U_201015_160726/163841524/ccs	chr8	+	597	4	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	388.477655585091	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343478	61360614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_61343571_61357033_61357122_61358581_61358755_61360370
m54284U_201015_160726/163908280/ccs	chr9	+	1381	1	FSM	ENSMUSG00000094437.3	ENSMUST00000178509.3	357	1	-81	-943	-81	943	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAGAAGAGAGATAAGA	NA	False	NA	NA	False	AATAAA	-39	NA	44375458	44376839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_44375500_44376800
m54284U_201015_160726/1640110/ccs	chr10	+	1357	3	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	combination_of_known_splicesites	TRUE	canonical	2	9	junction_1	345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80438784_80448175_80448294_80450437
m54284U_201015_160726/164104211/ccs	chr11	+	176	1	Intergenic	novelGene_5926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATTATTTTCTTA	441	False	NA	NA	False	NA	NA	NA	68540055	68540231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68540100_68540200
m54284U_201015_160726/164235402/ccs	chr2	-	219	1	Intergenic	novelGene_704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGAACAATGCTTATTT	NA	False	NA	NA	False	AATGAA	-15	NA	31597394	31597175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31597200_31597400
m54284U_201015_160726/164432459/ccs	chr8	+	194	1	Intergenic	novelGene_4207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGATCCTGAAGTC	NA	False	NA	NA	False	NA	NA	NA	13256136	13256330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_13256100_13256300
m54284U_201015_160726/164560980/ccs	chr16	+	193	1	Intergenic	novelGene_8175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCAACTAAGAATTAC	NA	False	NA	NA	False	NA	NA	NA	29543375	29543568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_29543400_29543600
m54284U_201015_160726/164561288/ccs	chr15	-	175	1	Intergenic	novelGene_7735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	59180697	59180522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_59180500_59180700
m54284U_201015_160726/164758065/ccs	chr5	+	2843	1	NIC	ENSMUSG00000058013.12	novel	1792	10	NA	NA	25092	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCCATCCCTGCCT	NA	False	NA	4	True	TTTAAA	-16	NA	93321453	93324296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_93321500_93324300
m54284U_201015_160726/164759362/ccs	chr9	+	211	1	Intergenic	novelGene_4844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTATGAGGTGATATGTGT	NA	False	NA	NA	False	TTTAAA	-13	NA	62620932	62621143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_62620900_62621100
m54284U_201015_160726/164823518/ccs	chr11	+	189	1	Intergenic	novelGene_6506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATAGCAGTCGAGTGAG	804	False	NA	NA	False	NA	NA	NA	120099750	120099939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120099800_120099900
m54284U_201015_160726/165021228/ccs	chr3	+	175	1	Intergenic	novelGene_1358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19798641	19798816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_19798600_19798800
m54284U_201015_160726/165283531/ccs	chr9	+	144	1	Intergenic	novelGene_4969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	78380354	78380498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_78380400_78380500
m54284U_201015_160726/165675570/ccs	chr9	+	175	1	Intergenic	novelGene_4717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	40678964	40679139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_40679000_40679100
m54284U_201015_160726/166134530/ccs	chr1	-	5892	24	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_18	96.0161848360608	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778397	152712746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
m54284U_201015_160726/166463764/ccs	chr12	-	2963	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	224	junction_12	44.2401118895511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGCTTTCTGGTGTGG	NA	False	NA	0	True	AATAAA	-19	NA	112640710	112620254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112626096_112628613_112628743_112637949_112638089_112640433
m54284U_201015_160726/16648218/ccschrUn	chrUn_JH584304v1	-	1945	9	Intergenic	novelGene_9757	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_2	317.672763036115	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59716	52189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_53770_54335_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
m54284U_201015_160726/166725123/ccs	chr1	-	178	1	Intergenic	novelGene_508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATAATGTGTG	NA	False	NA	NA	False	NA	NA	NA	180147357	180147179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_180147200_180147400
m54284U_201015_160726/166725324/ccs	chr4	+	188	1	Intergenic	novelGene_1821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATGCCTTCACAA	NA	False	NA	NA	False	NA	NA	NA	41485041	41485229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_41485000_41485200
m54284U_201015_160726/166726100/ccs	chr5	+	2091	19	NNC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	115.307064552882	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	False	NA	33	True	AATAAA	-21	NA	31398238	31408910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_31398347_31401106_31401177_31401257_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
m54284U_201015_160726/166920631/ccs	chr2	+	182	1	Intergenic	novelGene_1257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCCTCTACCTTTT	NA	False	NA	NA	False	NA	NA	NA	167999072	167999254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_167999100_167999300
m54284U_201015_160726/166988124/ccs	chr7	+	189	2	Intergenic	novelGene_3649	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTGTCTCAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	12549583	12688000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_12549634_12687861
m54284U_201015_160726/16714042/ccs	chr18	+	206	1	Intergenic	novelGene_9011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAAATAGCACTGGGAG	NA	False	NA	NA	False	NA	NA	NA	73682241	73682447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_73682200_73682400
m54284U_201015_160726/167838886/ccs	chr11	+	3403	1	NIC	ENSMUSG00000059552.14	novel	1867	11	NA	NA	0	-6017	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACTAAATCAAAC	NA	False	NA	NA	False	NA	NA	NA	69471227	69474630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_69471200_69474600
m54284U_201015_160726/167840452/ccs	chr4	+	1765	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	27.5680975041804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTTAGTTTGTAG	42	False	NA	16	True	AATAAA	-28	NA	103171008	103223640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103223169
m54284U_201015_160726/167971173/ccs	chr8	+	192	1	Intergenic	novelGene_4190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGGGAGATAATGATG	NA	False	NA	NA	False	NA	NA	NA	4322233	4322425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_4322200_4322400
m54284U_201015_160726/168299105/ccs	chr2	+	189	1	Intergenic	novelGene_975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGAAGTTTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	105194907	105195096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_105194900_105195100
m54284U_201015_160726/168363877/ccs	chr3	+	190	1	Intergenic	novelGene_1343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTAGATCTCTCCCTTC	NA	False	NA	NA	False	NA	NA	NA	9278179	9278369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_9278200_9278400
m54284U_201015_160726/168430017/ccs	chr2	-	2141	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	-15	930	-15	-930	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTTAGGACCTAAGGG	NA	False	NA	-11	True	AATAAA	-12	NA	120971149	120969008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_120969000_120971100
m54284U_201015_160726/169215959/ccs	chr1	+	183	1	Intergenic	novelGene_399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAGTTCTTTTAAGGGT	NA	False	NA	NA	False	NA	NA	NA	155840404	155840587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_155840400_155840600
m54284U_201015_160726/169803926/ccs	chr2	+	177	1	Intergenic	novelGene_1319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAGAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	180543574	180543751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_180543600_180543800
m54284U_201015_160726/169803943/ccs	chr14	+	152	1	Intergenic	novelGene_7568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	87377227	87377379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_87377200_87377400
m54284U_201015_160726/169804967/ccs	chr2	+	204	1	Intergenic	novelGene_612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACCAAGCATACTTTAG	NA	False	NA	NA	False	NA	NA	NA	19410981	19411185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_19411000_19411200
m54284U_201015_160726/169872189/ccs	chr4	+	205	1	Intergenic	novelGene_2087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGATGTGAGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	123397740	123397945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_123397700_123397900
m54284U_201015_160726/169936444/ccs	chr6	+	183	1	Intergenic	novelGene_3164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAAAGCAGG	NA	False	NA	NA	False	NA	NA	NA	34893110	34893293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_34893100_34893300
m54284U_201015_160726/169937567/ccs	chr3	-	1687	4	NIC	ENSMUSG00000053192.10	novel	793	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.9942523039768	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGGGCTTAGTTTTTTC	4659	False	NA	0	True	AATAAA	-16	NA	95137709	95126445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95127775_95135394_95135571_95136362_95136517_95137681
m54284U_201015_160726/170067811/ccs	chr3	+	304	1	Intergenic	novelGene_1345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAGAGCTATACA	4113	False	NA	NA	False	NA	NA	NA	9662487	9662791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_9662500_9662800
m54284U_201015_160726/170264783/ccs	chr3	-	177	1	Intergenic	novelGene_1563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACT	372	False	NA	NA	False	NA	NA	NA	95015067	95014890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_95014900_95015100
m54284U_201015_160726/170264982/ccs	chr7	-	1344	4	NNC	ENSMUSG00000092367.2	novel	556	7	NA	NA	-3947	-3734	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	12.4988888395018	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGGTTTGTTCGTGTA	NA	False	NA	0	True	AATAAA	-20	NA	27060791	27055807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27056876_27059167_27059211_27059359_27059534_27060732
m54284U_201015_160726/170265280/ccs	chr8	+	1306	8	NIC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	0	175	intron_retention	FALSE	canonical	3	1933	junction_5	89.830679728076	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATCGTGCCACTAAC	NA	False	NA	32	True	AATAAA	-23	NA	95584145	95590544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589513_95590079
m54284U_201015_160726/170329420/ccs	chr8	+	217	1	Intergenic	novelGene_4451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTATCAGCTATGAAA	8753	False	NA	NA	False	TATAAA	-16	NA	106645045	106645262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106645000_106645300
m54284U_201015_160726/170788540/ccs	chr14	+	148	1	Intergenic	novelGene_7579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATTCATAAAATTAATCT	NA	False	NA	NA	False	NA	NA	NA	99481585	99481733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_99481600_99481700
m54284U_201015_160726/170854529/ccs	chr5	+	328	1	Intergenic	novelGene_2733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCGCGCAAAGATTAAAAA	NA	False	NA	NA	False	AATAAA	-42	NA	108015743	108016071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108015700_108016100
m54284U_201015_160726/170920322/ccs	chr4	-	4302	24	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	-6	-2205	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	119.498764141643	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	NA	False	NA	1	True	AATAAA	-22	NA	9669350	9451283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9669155
m54284U_201015_160726/170986078/ccs	chr9	+	206	1	Intergenic	novelGene_4927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTCAGGCTTCTCCCTTA	NA	False	NA	NA	False	TTTAAA	-5	NA	72376612	72376818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72376600_72376800
m54284U_201015_160726/171049200/ccs	chr7	-	132	1	Intergenic	novelGene_4047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGGAGGCTAGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	116310792	116310660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_116310700_116310800
m54284U_201015_160726/171050151/ccs	chr2	+	2864	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	162.261410791657	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209570	112244585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238875_112238959_112239485_112239576_112240487_112240582_112242727
m54284U_201015_160726/171574534/ccs	chr11	-	192	1	Intergenic	novelGene_6370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTAAACATAGTCAGTG	NA	False	NA	NA	False	NA	NA	NA	104404968	104404776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_104404800_104405000
m54284U_201015_160726/171707178/ccs	chr8	+	176	1	Intergenic	novelGene_4611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGAGGGCTCATGGT	NA	False	NA	1	True	NA	NA	NA	127303150	127303326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_127303200_127303300
m54284U_201015_160726/17172834/ccs	chrX	+	174	1	Intergenic	novelGene_9551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTAAAATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	100080402	100080576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100080400_100080600
m54284U_201015_160726/171903002/ccs	chr8	+	3592	18	NIC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	-140	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	83.0977246012792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26022000	26064801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_26022178_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
m54284U_201015_160726/171968146/ccs	chr5	+	3661	11	NIC	ENSMUSG00000029528.20	novel	898	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	85.531046994644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115680972	115694046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_115681121_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
m54284U_201015_160726/171968816/ccs	chr1	+	211	1	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGTCTCAGAGCCATT	6568	False	NA	NA	False	NA	NA	NA	38055821	38056032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_38055800_38056000
m54284U_201015_160726/172032707/ccs	chr10	+	1798	1	NIC	ENSMUSG00000019970.16	novel	563	4	NA	NA	3	-9930	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	21854573	21856371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_21854600_21856400
m54284U_201015_160726/172230537/ccs	chr1	-	110	1	FSM	ENSMUSG00000119657.1	ENSMUST00000239682.1	107	1	0	-3	0	3	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAGAACAACAAATGCAC	NA	False	NA	NA	False	NA	NA	NA	54288367	54288257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_54288300_54288400
m54284U_201015_160726/172362044/ccs	chr14	+	2653	14	NNC	ENSMUSG00000022019.17	novel	2657	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	26.7566283332432	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTCTGGTTCACTTGTC	NA	False	NA	7	True	AATAAA	-21	NA	87654074	87782940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_87654285_87694469_87694555_87696196_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
m54284U_201015_160726/172886639/ccs	chrX	+	177	1	Intergenic	novelGene_9706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	158728138	158728315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_158728100_158728300
m54284U_201015_160726/173475716/ccs	chr19	+	198	1	Intergenic	novelGene_9239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCTTTCATAGCTATTA	NA	False	NA	NA	False	NA	NA	NA	37489668	37489866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_37489700_37489900
m54284U_201015_160726/174130018/ccs	chr1	+	197	1	Antisense	novelGene_ENSMUSG00000099969.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGACCAGAGACAAGC	NA	False	NA	NA	False	NA	NA	NA	152965079	152965276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_152965100_152965300
m54284U_201015_160726/174262534/ccs	chr4	+	175	1	Intergenic	novelGene_2126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAATAAATACA	NA	False	NA	NA	False	NA	NA	NA	126882852	126883027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126882900_126883000
m54284U_201015_160726/174262620/ccs	chr18	+	3049	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	938	junction_12	93.71114419701	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGGACAGAAAATTGATA	6249	False	NA	53	True	TATAAA	-2	NA	34758059	34765888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_34758114_34758510_34758695_34759768_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
m54284U_201015_160726/174392881/ccs	chr9	-	5948	19	NNC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	0	-71	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_13	93.8585749879329	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53578807	53525952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553895_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
m54284U_201015_160726/174915679/ccs	chr1	+	652	2	ISM	ENSMUSG00000044835.16	ENSMUST00000052245.9	849	6	-76	12725	0	-11829	5prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATCAAGGTCAAACTTACC	NA	False	NA	NA	False	ATTAAA	-17	NA	160970260	160979036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_160970411_160978534
m54284U_201015_160726/174982347/ccs	chr7	+	2876	19	NNC	ENSMUSG00000006649.18	novel	4608	30	NA	NA	5563	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_16	15.2206000757745	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAAAAATTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	30164712	30186648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181898_30182006_30186009_30186175_30186263
m54284U_201015_160726/175114398/ccs	chr14	-	5939	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-4512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	116.27942346343	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCACCTTGGCTTGATT	NA	False	NA	-2	True	AATAAA	-27	NA	62998587	62927764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996_62998083_62998543
m54284U_201015_160726/175308851/ccs	chr6	+	1139	1	FSM	ENSMUSG00000080242.6	ENSMUST00000122373.2	465	1	-111	-563	-111	563	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAGGGAAAATCCTAA	NA	False	NA	NA	False	AATAAA	-37	NA	37782909	37784048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_37782900_37784000
m54284U_201015_160726/175376962/ccs	chr16	+	195	1	Intergenic	novelGene_8135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTCAATCACCCTAGA	2544	False	NA	NA	False	NA	NA	NA	20126373	20126568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_20126400_20126600
m54284U_201015_160726/17566331/ccs	chr7	-	176	1	Intergenic	novelGene_4137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATCTAGTAGAAGC	NA	False	NA	NA	False	NA	NA	NA	134894456	134894280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_134894300_134894500
m54284U_201015_160726/175900229/ccs	chr4	+	193	1	Intergenic	novelGene_1806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAACAGATTCAGAAAG	NA	False	NA	NA	False	NA	NA	NA	40217791	40217984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_40217800_40218000
m54284U_201015_160726/176032154/ccs	chr1	+	199	1	ISM	ENSMUSG00000056055.14	ENSMUST00000130886.8	1886	9	21170	252	-1638	-252	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGACATTAGAAGTCA	NA	False	NA	NA	False	NA	NA	NA	87752571	87752770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_87752600_87752800
m54284U_201015_160726/17630738/ccs	chr9	-	3344	5	Fusion	ENSMUSG00000062762.18_ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	-828	multi-exon	FALSE	canonical	0	0	junction_2	746.804316738997	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGCAGTTATTTTGA	NA	False	NA	NA	False	TATAAA	-27	NA	36708689	36641467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_-_36644259_36645610_36645727_36701075_36701222_36704535_36704646_36708508
m54284U_201015_160726/176359324/ccs	chr11	+	1958	1	Antisense	novelGene_ENSMUSG00000037278.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	78433402	78435360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_78433400_78435400
m54284U_201015_160726/176359349/ccs	chr18	-	192	1	Intergenic	novelGene_8856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTGTATAGCCATGGTG	NA	False	NA	NA	False	NA	NA	NA	32003481	32003289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_32003300_32003500
m54284U_201015_160726/176621852/ccs	chr5	+	174	1	Intergenic	novelGene_2451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAGAAGGAGAAGA	4528	False	NA	NA	False	NA	NA	NA	3526790	3526964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_3526800_3527000
m54284U_201015_160726/176753413/ccs	chr7	-	883	8	NIC	ENSMUSG00000030706.18	novel	4285	8	NA	NA	0	116	combination_of_known_junctions	FALSE	canonical	1	13	junction_7	166.611487464406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTTTGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	100256845	100198327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100256764
m54284U_201015_160726/177014453/ccs	chr11	+	174	1	Intergenic	novelGene_5874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	59282517	59282691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59282500_59282700
m54284U_201015_160726/177145714/ccs	chr4	+	186	1	Intergenic	novelGene_2425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTGGTAGAAACGGGAG	NA	False	NA	NA	False	NA	NA	NA	155447884	155448070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_155447900_155448100
m54284U_201015_160726/177210691/ccs	chr6	+	204	1	Intergenic	novelGene_3117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGCCCACTACCTGATC	2759	False	NA	NA	False	NA	NA	NA	23093676	23093880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_23093700_23093900
m54284U_201015_160726/177670025/ccs	chr11	+	184	1	Intergenic	novelGene_6359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACTCTGCACAGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	103297126	103297310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_103297100_103297300
m54284U_201015_160726/177932780/ccs	chr3	+	173	1	Intergenic	novelGene_1697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCTCATTCTCTCCTGG	NA	False	NA	NA	False	NA	NA	NA	137486474	137486647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_137486500_137486600
m54284U_201015_160726/178454588/ccs	chr12	-	187	1	Intergenic	novelGene_6764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACATTACAGAAATAGAG	4401	False	NA	NA	False	NA	NA	NA	80964392	80964205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80964200_80964400
m54284U_201015_160726/178456665/ccs	chr16	-	1180	3	Intergenic	novelGene_8279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTTGTTTTTCCTTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	55609203	55596651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_55596986_55600813_55601569_55609112
m54284U_201015_160726/178522527/ccs	chr11	-	236	1	Intergenic	novelGene_6163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTCCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	86914201	86913965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_86914000_86914200
m54284U_201015_160726/179504888/ccs	chr4	+	151	1	Intergenic	novelGene_2214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAACTATGCTTTCTAAA	8413	False	NA	NA	False	NA	NA	NA	133076684	133076835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133076700_133076800
m54284U_201015_160726/17957953/ccs	chr15	+	3794	11	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	583	junction_6	59.5218447294773	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900569	81924286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81915464_81919877_81919979_81921657_81921772_81923922
m54284U_201015_160726/179963460/ccs	chr18	+	189	1	Intergenic	novelGene_8851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGGAGCCATGCATCCC	NA	False	NA	NA	False	NA	NA	NA	30829390	30829579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_30829400_30829600
m54284U_201015_160726/180027918/ccs	chr4	+	176	1	Intergenic	novelGene_2070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGACATGAATT	789	False	NA	NA	False	NA	NA	NA	120292137	120292313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_120292100_120292300
m54284U_201015_160726/180028054/ccs	chr8	-	1535	9	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	548.641717676481	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564889	95549188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559112_95559329_95564879
m54284U_201015_160726/180292082/ccs	chr11	-	172	1	Intergenic	novelGene_6330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTAAAACAATATTCTC	2115	False	NA	NA	False	NA	NA	NA	101117779	101117607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_101117600_101117800
m54284U_201015_160726/180357461/ccs	chr2	+	175	1	Intergenic	novelGene_1212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGAGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	164556407	164556582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_164556400_164556600
m54284U_201015_160726/180554074/ccs	chr19	-	2180	13	ISM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	4639	21	4515	0	3prime_fragment	FALSE	canonical	0	0	junction_12	8.38152730712011	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATCTTTCTTCTTCCTCCT	7237	False	NA	-8	True	AATAAA	-17	NA	6992198	6976346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427_6991597_6991695_6991816_6991984
m54284U_201015_160726/18352520/ccs	chr19	-	182	1	Intergenic	novelGene_9100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGCTTTAAGAAACTGG	5902	False	NA	NA	False	NA	NA	NA	5462594	5462412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5462400_5462600
m54284U_201015_160726/18352698/ccs	chr19	+	177	1	Intergenic	novelGene_9250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTTATAAAAAGGATTGG	NA	False	NA	NA	False	NA	NA	NA	40261491	40261668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_40261500_40261700
m54284U_201015_160726/18548487/ccs	chr5	+	188	1	Intergenic	novelGene_2869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGTAATGACGATGATG	NA	False	NA	NA	False	NA	NA	NA	122421004	122421192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_122421000_122421200
m54284U_201015_160726/18810711/ccs	chr11	-	1508	12	NNC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	1377.50809869978	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7688	False	NA	95	True	NA	NA	NA	102298370	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296636_102297031_102297077_102297187_102297248_102297380_102297481_102298215
m54284U_201015_160726/19335047/ccs	chr5	+	192	1	Intergenic	novelGene_2537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	33356382	33356574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_33356400_33356600
m54284U_201015_160726/19531119/ccs	chr1	+	3304	1	ISM	ENSMUSG00000025964.16	ENSMUST00000087374.10	6426	26	146902	176	7774	-176	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGTTGTAGTTTTGTGC	NA	False	NA	NA	False	ATTAAA	-15	NA	63631955	63635259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_63632000_63635300
m54284U_201015_160726/19662046/ccs	chrX	+	1035	1	FSM	ENSMUSG00000084349.4	ENSMUST00000120557.2	1210	1	263	-88	263	88	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTTGAACACAACTCTT	NA	False	NA	NA	False	AATAAA	-43	NA	13069072	13070107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_13069100_13070100
m54284U_201015_160726/19991242/ccs	chr12	+	191	1	Intergenic	novelGene_6627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATTTCTAATGAT	NA	False	NA	NA	False	NA	NA	NA	50873573	50873764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_50873600_50873800
m54284U_201015_160726/2033435/ccs	chr16	+	181	1	Intergenic	novelGene_8179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAGAAGACAAAGAG	3334	False	NA	3	True	NA	NA	NA	30059051	30059232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_30059100_30059200
m54284U_201015_160726/20515026/ccs	chr1	+	183	1	Intergenic	novelGene_358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAGAAGTAAATA	2146	False	NA	NA	False	NA	NA	NA	136951845	136952028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_136951800_136952000
m54284U_201015_160726/20579774/ccs	chr11	+	177	1	Intergenic	novelGene_6473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCAGCCTTAACA	8552	False	NA	NA	False	NA	NA	NA	116317389	116317566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_116317400_116317600
m54284U_201015_160726/20776561/ccs	chr1	+	199	1	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCAAAACGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	36019591	36019790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36019600_36019800
m54284U_201015_160726/2099759/ccs	chr2	+	198	1	Intergenic	novelGene_886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGTTTTTGCTGTTA	NA	False	NA	NA	False	NA	NA	NA	80355382	80355580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_80355400_80355600
m54284U_201015_160726/21694557/ccs	chr6	-	4257	10	NIC	ENSMUSG00000029684.15	novel	4352	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	63.7305283746619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTCTCATTTGTTAT	2	True	NA	NA	False	AATAAA	-27	NA	24664937	24613803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24633835_24633933_24634570_24634658_24637647_24637783_24664534
m54284U_201015_160726/22153753/ccs	chr4	+	189	1	Intergenic	novelGene_1746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTATTTTACAGAAGC	NA	False	NA	NA	False	NA	NA	NA	11244940	11245129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_11244900_11245100
m54284U_201015_160726/22217267/ccs	chr11	-	1684	12	NIC	ENSMUSG00000018697.15	novel	1822	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	148.688370106605	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTTCACTGTGAGT	NA	False	NA	0	True	AATAAA	-44	NA	84404348	84313680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84401024_84401244_84402308_84402405_84402966_84403156_84404117
m54284U_201015_160726/22283719/ccs	chr14	+	4603	22	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	291	junction_9	30.2922275116745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724403	20744920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
m54284U_201015_160726/22284402/ccs	chr6	-	173	1	Intergenic	novelGene_3488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAGTGAATGGATAA	3797	False	NA	NA	False	NA	NA	NA	122776171	122775998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122776000_122776200
m54284U_201015_160726/2229282/ccs	chr8	-	221	1	Intergenic	novelGene_4548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	120599693	120599472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_120599500_120599700
m54284U_201015_160726/22545657/ccs	chr4	-	176	1	Intergenic	novelGene_1774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACCTAATTTATGT	NA	False	NA	NA	False	NA	NA	NA	25780553	25780377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_25780400_25780600
m54284U_201015_160726/22741261/ccs	chr12	+	193	1	Intergenic	novelGene_6704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTAGTTGGCCATAAA	NA	False	NA	NA	False	NA	NA	NA	71230282	71230475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_71230300_71230500
m54284U_201015_160726/22807622/ccs	chr15	+	177	1	Intergenic	novelGene_7747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATGTATTCAT	NA	False	NA	NA	False	NA	NA	NA	70386521	70386698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_70386500_70386700
m54284U_201015_160726/23332285/ccs	chr5	+	166	1	Intergenic	novelGene_2663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGTTTATAGC	NA	False	NA	NA	False	NA	NA	NA	92234729	92234895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92234700_92234900
m54284U_201015_160726/2359492/ccs	chr10	+	175	1	Intergenic	novelGene_5466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATAAGAAAATACA	7910	False	NA	NA	False	NA	NA	NA	81241079	81241254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_81241100_81241300
m54284U_201015_160726/23595223/ccs	chr1	+	198	1	Intergenic	novelGene_548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAAAAGAGCACATTG	1744	False	NA	NA	False	AATAAA	-12	NA	190762705	190762903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_190762700_190762900
m54284U_201015_160726/24184610/ccs	chr2	+	186	1	Intergenic	novelGene_831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTACCTCAAACTATTA	NA	False	NA	NA	False	NA	NA	NA	69573056	69573242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69573100_69573200
m54284U_201015_160726/24641844/ccs	chr8	+	187	1	Intergenic	novelGene_4407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTATGTGGGAGCCAGA	NA	False	NA	NA	False	NA	NA	NA	93516713	93516900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_93516700_93516900
m54284U_201015_160726/24707406/ccs	chrX	+	971	7	NNC	ENSMUSG00000001127.13	novel	1474	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_6	124.993333155546	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTCCTTCATTGTT	6305	False	NA	NA	False	AATAAA	-27	NA	20714813	20719143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20718834
m54284U_201015_160726/24905699/ccs	chr7	-	180	1	Intergenic	novelGene_4125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGAGCCAGTCAT	NA	False	NA	NA	False	NA	NA	NA	131822718	131822538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_131822500_131822700
m54284U_201015_160726/25233454/ccs	chr2	+	209	1	Intergenic	novelGene_1153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAAGTTTCCTTATTTT	1652	False	NA	NA	False	NA	NA	NA	155015211	155015420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155015200_155015400
m54284U_201015_160726/25627028/ccs	chr7	-	191	1	Intergenic	novelGene_4015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTTTTTTTTAAAT	9614	False	NA	NA	False	NA	NA	NA	109599613	109599422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_109599400_109599600
m54284U_201015_160726/25758359/ccs	chr6	+	173	1	Intergenic	novelGene_3277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTTTTAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	52324029	52324202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_52324000_52324200
m54284U_201015_160726/25822539/ccs	chr3	+	211	1	Intergenic	novelGene_1481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAGATGACTCCTATT	NA	False	NA	NA	False	NA	NA	NA	88180846	88181057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88180800_88181100
m54284U_201015_160726/26020497/ccs	chr15	+	188	1	Intergenic	novelGene_7863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTATATGGAATGGGTT	NA	False	NA	NA	False	NA	NA	NA	82719236	82719424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_82719200_82719400
m54284U_201015_160726/26151746/ccs	chr11	+	248	1	Intergenic	novelGene_6419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATCATAGAAGGCCTG	3408	False	NA	NA	False	NA	NA	NA	107356548	107356796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107356500_107356800
m54284U_201015_160726/26610164/ccs	chr3	+	172	1	Intergenic	novelGene_1395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	51300652	51300824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_51300700_51300800
m54284U_201015_160726/26805320/ccs	chr7	+	558	4	NIC	ENSMUSG00000006333.15	novel	751	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	288	junction_2	6025.82189875834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAATTGATACTTG	1313	False	NA	-18	True	NA	NA	NA	3707040	3709875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3707064_3707325_3707448_3708731_3708919_3709649
m54284U_201015_160726/26872647/ccs	chr7	+	187	1	Intergenic	novelGene_3720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAACCGAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	27000845	27001032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_27000800_27001000
m54284U_201015_160726/26936169/ccs	chr11	+	161	1	Intergenic	novelGene_6260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	96981136	96981297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_96981100_96981300
m54284U_201015_160726/26936485/ccs	chr5	-	1886	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAAGTGGTAATATTTT	NA	False	NA	NA	False	ATTAAA	-17	NA	104608217	104606331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_104606300_104608200
m54284U_201015_160726/26938086/ccs	chr11	-	175	1	Intergenic	novelGene_5798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAAATGCCTG	NA	False	NA	NA	False	NA	NA	NA	49930451	49930276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_49930300_49930500
m54284U_201015_160726/27264678/ccs	chr14	-	186	1	Intergenic	novelGene_7428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGATTAGTAGTC	NA	False	NA	NA	False	NA	NA	NA	49612094	49611908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_49611900_49612100
m54284U_201015_160726/27459691/ccs	chr15	+	1670	15	NNC	ENSMUSG00000022437.8	novel	4629	15	NA	NA	0	-2957	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	489.244878379333	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGATGTGGTCTGTTTT	NA	False	NA	34	True	AATAAA	-20	NA	84076441	84098511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_84076586_84079946_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
m54284U_201015_160726/27459867/ccs	chr7	+	1078	1	Intergenic	novelGene_4121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATACATTTCCCATATT	NA	False	NA	NA	False	NA	NA	NA	130093426	130094504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_130093400_130094500
m54284U_201015_160726/27722087/ccs	chr16	+	174	1	Intergenic	novelGene_8072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTAAAAAAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	13557761	13557935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13557800_13557900
m54284U_201015_160726/27920498/ccs	chr10	+	174	1	Intergenic	novelGene_5544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTTACATTGTACAAC	NA	False	NA	NA	False	NA	NA	NA	115801625	115801799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_115801600_115801800
m54284U_201015_160726/27921029/ccs	chr11	+	2326	1	Intergenic	novelGene_5827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	NA	False	NA	NA	False	NA	NA	NA	53185515	53187841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53185500_53187800
m54284U_201015_160726/28182725/ccs	chr11	-	4736	14	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-609	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	81.1953594150093	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9723	False	NA	-2	True	NA	NA	NA	104360296	104224326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229071_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
m54284U_201015_160726/28445092/ccs	chrX	+	257	1	Intergenic	novelGene_9446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGTAGTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	47560686	47560943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_47560700_47560900
m54284U_201015_160726/2885193/ccs	chr13	-	1344	10	NNC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	138.91484201961	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	False	NA	1	True	AATAAA	-41	NA	100912407	100896181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100907981_100908075_100908162_100908212_100909233_100909290_100912194
m54284U_201015_160726/29035035/ccs	chr8	-	1834	9	NNC	ENSMUSG00000031730.19	novel	2039	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	170.012821207696	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAGAATATATTGTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	110335052	110320108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_110320762_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
m54284U_201015_160726/29623941/ccs	chr17	+	1935	5	NNC	ENSMUSG00000034165.17	novel	1977	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	58	junction_3	1635.74637016256	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47904394	47910614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_47904778_47905658_47905875_47908344_47908505_47908969_47909065_47909533
m54284U_201015_160726/29821554/ccs	chr19	+	173	1	Intergenic	novelGene_9069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATGTGTGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	3804733	3804906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3804700_3804900
m54284U_201015_160726/30018157/ccs	chr14	-	209	1	Intergenic	novelGene_7330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGCTAACGACCAGTCA	NA	False	NA	NA	False	NA	NA	NA	8011114	8010905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_8010900_8011100
m54284U_201015_160726/3016471/ccs	chr2	-	1302	4	ISM	ENSMUSG00000004113.19	ENSMUST00000100348.10	7182	47	153079	0	-2434	0	3prime_fragment	FALSE	canonical	1	1	junction_3	2.62466929133727	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTTCTCTCTATCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	24499980	24496386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_24497113_24497453_24497699_24497953_24498159_24499854
m54284U_201015_160726/30671868/ccs	chr4	+	226	1	Intergenic	novelGene_1950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTCTTTTTTAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	99605364	99605590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_99605400_99605600
m54284U_201015_160726/30673675/ccs	chr7	+	789	6	NIC	ENSMUSG00000019738.16	novel	819	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	481.665610148784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTGTTTCCCGTGTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29931372	29932811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_29931804_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
m54284U_201015_160726/30736405/ccs	chr17	+	226	1	Intergenic	novelGene_8564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTATTTTATGTATTT	1193	False	NA	NA	False	NA	NA	NA	35822877	35823103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35822900_35823100
m54284U_201015_160726/30736539/ccs	chr5	+	175	1	Intergenic	novelGene_2502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCTTATCACT	NA	False	NA	NA	False	NA	NA	NA	28424225	28424400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_28424200_28424400
m54284U_201015_160726/3081678/ccs	chr6	+	190	1	Intergenic	novelGene_3329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTGTAGCAAGAGATGG	NA	False	NA	NA	False	NA	NA	NA	72791066	72791256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_72791100_72791300
m54284U_201015_160726/31196214/ccs	chr14	+	197	1	Intergenic	novelGene_7599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAAACCTCTAA	NA	False	NA	NA	False	NA	NA	NA	121075877	121076074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_121075900_121076100
m54284U_201015_160726/3148600/ccs	chr14	+	176	1	Intergenic	novelGene_7495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGGGGAGT	NA	False	NA	NA	False	NA	NA	NA	58132282	58132458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_58132300_58132500
m54284U_201015_160726/31523782/ccs	chr3	+	196	1	Intergenic	novelGene_1424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	66635944	66636140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_66635900_66636100
m54284U_201015_160726/31525664/ccs	chr4	-	797	4	NNC	ENSMUSG00000028322.12	novel	1077	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_3	209.085309542939	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTAGTTCTACAGT	3	True	NA	-1	True	AATAAA	-17	NA	45320604	45316612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_45317029_45317677_45317830_45319549_45319700_45320525
m54284U_201015_160726/31654400/ccs	chr16	+	200	1	Genic_Genomic	ENSMUSG00000041215.17	novel	NA	NA	NA	NA	-1987	22	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCTTAACCTCTTCAA	NA	False	NA	NA	False	NA	NA	NA	20009728	20009928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_+_20009700_20009900
m54284U_201015_160726/31721689/ccs	chr14	-	3271	5	NIC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	71.0633520177595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335554	65289511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65335445
m54284U_201015_160726/32048253/ccs	chr11	+	136	1	Intergenic	novelGene_5646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3123798	3123934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_3123800_3123900
m54284U_201015_160726/32312050/ccs	chr2	+	171	1	Intergenic	novelGene_628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTTAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	24805024	24805195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_24805000_24805200
m54284U_201015_160726/32639734/ccs	chr16	+	204	1	Intergenic	novelGene_8101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCATCCTGCTTTTACA	1033	False	NA	NA	False	NA	NA	NA	17201978	17202182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17202000_17202200
m54284U_201015_160726/32965112/ccs	chr17	-	7285	5	ISM	ENSMUSG00000116560.2	ENSMUST00000231996.2	3159	6	3116	-4353	3116	4353	3prime_fragment	FALSE	canonical	2	12	junction_2	8.31790237980706	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTACATGTGTGCCAAG	NA	False	NA	NA	False	AATAAA	-21	NA	6792996	6774836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_6779304_6781304_6783818_6785940_6786085_6791132_6791227_6792929
m54284U_201015_160726/33229440/ccs	chr6	-	190	1	Intergenic	novelGene_3476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTTGAGTCATGGTC	9136	False	NA	NA	False	NA	NA	NA	122485075	122484885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122484900_122485100
m54284U_201015_160726/33359634/ccs	chr15	+	183	1	Intergenic	novelGene_7625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCGGGCAGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	8483253	8483436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8483300_8483400
m54284U_201015_160726/3342699/ccs	chr4	-	179	1	Intergenic	novelGene_2107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	125048485	125048306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_125048300_125048500
m54284U_201015_160726/33557224/ccs	chr5	-	2515	11	NNC	ENSMUSG00000029405.17	novel	2716	12	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	510.187455745435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTTCTTCAGTTAAC	NA	False	NA	-9	True	AGTAAA	-17	NA	92231208	92201575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231131
m54284U_201015_160726/33686434/ccs	chr3	+	3306	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	95.5102569553316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7808	False	NA	27	True	AATAAA	-23	NA	40754476	40771318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
m54284U_201015_160726/33751759/ccs	chr18	+	1847	1	Intergenic	novelGene_9046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCAACAGCGTCACCCA	NA	False	NA	NA	False	NA	NA	NA	80165985	80167832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_80166000_80167800
m54284U_201015_160726/34276029/ccs	chr11	-	212	1	Intergenic	novelGene_6383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGAATATGCATGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	106007148	106006936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106006900_106007100
m54284U_201015_160726/34276537/ccs	chr7	-	2429	21	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_3	295.222475431665	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153827	143111442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
m54284U_201015_160726/34342235/ccs	chr5	-	178	1	Intergenic	novelGene_2938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGCTGCTGCTGCTGC	6486	False	NA	NA	False	NA	NA	NA	129122083	129121905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129121900_129122100
m54284U_201015_160726/34409158/ccs	chr5	+	139	1	Intergenic	novelGene_2796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATATATATAT	NA	False	NA	NA	False	NA	NA	NA	115077725	115077864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115077700_115077900
m54284U_201015_160726/34604292/ccs	chr17	+	179	1	Intergenic	novelGene_8533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATGTATTATGA	5257	False	NA	NA	False	NA	NA	NA	33815779	33815958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_33815800_33816000
m54284U_201015_160726/34670743/ccs	chr9	+	1747	1	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	0	-23264	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACGCT	4420	False	NA	NA	False	NA	NA	NA	77661816	77663563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_77661800_77663600
m54284U_201015_160726/34671113/ccs	chr17	-	3526	1	Antisense	novelGene_ENSMUSG00000061130.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85274982	85271456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_85271500_85275000
m54284U_201015_160726/35129779/ccs	chr3	-	189	1	Intergenic	novelGene_1401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAATTAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	51342058	51341869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_51341900_51342100
m54284U_201015_160726/35261229/ccs	chr7	+	125	1	Intergenic	novelGene_3901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTTTAGATTATTATAC	NA	False	NA	2	True	AATAAA	-10	NA	79289899	79290024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79289900_79290000
m54284U_201015_160726/35392007/ccs	chr10	+	875	1	Intergenic	novelGene_5546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACAGCTGACTACTGGG	NA	False	NA	NA	False	NA	NA	NA	116397482	116398357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_116397500_116398400
m54284U_201015_160726/35392242/ccs	chr4	-	199	1	Intergenic	novelGene_2039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAACTGGAGAGATGGCT	8288	False	NA	NA	False	NA	NA	NA	116994732	116994533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116994500_116994700
m54284U_201015_160726/35652997/ccs	chr11	+	207	1	Intergenic	novelGene_6034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTATTTTGTATGGGT	NA	False	NA	NA	False	AAGAAA	-5	NA	76302254	76302461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76302300_76302500
m54284U_201015_160726/3606371/ccs	chr17	+	128	1	Intergenic	novelGene_8579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATACACTCTTTTGTTTG	NA	False	NA	NA	False	AGTAAA	-19	NA	36310529	36310657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_36310500_36310700
m54284U_201015_160726/36242695/ccs	chr11	+	194	1	Intergenic	novelGene_5965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGTATGTGAGTACA	2663	False	NA	NA	False	NA	NA	NA	70522292	70522486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_70522300_70522500
m54284U_201015_160726/36309453/ccs	chr11	-	1452	5	NIC	ENSMUSG00000078812.11	novel	1343	6	NA	NA	79	0	intron_retention	FALSE	canonical	3	21069	junction_3	364.485510685953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6350	False	NA	-15	True	AATAAA	-20	NA	69812133	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69808168_69808253_69808328_69808422_69808848_69809976_69810163_69811988
m54284U_201015_160726/36570315/ccs	chr4	+	3725	1	Antisense	novelGene_ENSMUSG00000028790.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCAGGCAGTTTACTT	NA	False	NA	NA	False	AATAAA	-45	NA	129597298	129601023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_+_129597300_129601000
m54284U_201015_160726/36635656/ccs	chr2	-	3270	11	NNC	ENSMUSG00000039145.17	novel	1295	11	NA	NA	0	1971	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	13.8740765458462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTAAGAGTCATCGTGG	1177	False	NA	NA	False	AATAAA	-16	NA	5680857	5301726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_5303913_5306302_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5680724
m54284U_201015_160726/36897920/ccs	chr5	+	2516	15	NIC	ENSMUSG00000056310.15	novel	3044	16	NA	NA	0	-406	combination_of_known_splicesites	FALSE	canonical	2	25	junction_1	75.7162061751051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	4928	False	NA	20	True	AATAAA	-23	NA	130285875	130369998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_130286035_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
m54284U_201015_160726/37290782/ccs	chr2	+	176	1	Intergenic	novelGene_803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	59414963	59415139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_59415000_59415100
m54284U_201015_160726/3735580/ccs	chr17	+	1350	1	FSM	ENSMUSG00000044645.9	ENSMUST00000061681.9	756	1	-138	-456	-138	456	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTGTTGGAAATTTGA	NA	False	NA	NA	False	AATAAA	-34	NA	51005577	51006927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_51005600_51006900
m54284U_201015_160726/37553613/ccs	chr9	+	175	1	Intergenic	novelGene_5086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTTAAGGATAA	4692	False	NA	NA	False	NA	NA	NA	108332372	108332547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108332400_108332500
m54284U_201015_160726/37554790/ccs	chr7	-	175	1	Intergenic	novelGene_4175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAATACAGAT	9955	False	NA	NA	False	NA	NA	NA	141255511	141255336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_141255300_141255500
m54284U_201015_160726/3803556/ccs	chrX	-	185	1	Intergenic	novelGene_9496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTCAGTTTAGGAAC	NA	False	NA	NA	False	NA	NA	NA	72783324	72783139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_72783100_72783300
m54284U_201015_160726/38079141/ccs	chr4	+	209	1	Intergenic	novelGene_2130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAGAAATACTATAAGAAT	NA	False	NA	NA	False	NA	NA	NA	126993290	126993499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126993300_126993500
m54284U_201015_160726/38142326/ccs	chr14	-	158	1	Intergenic	novelGene_7571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAGTAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	93941985	93941827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_93941800_93942000
m54284U_201015_160726/38537336/ccs	chr3	+	3931	1	Antisense	novelGene_ENSMUSG00000040943.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	133176709	133180640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_133176700_133180600
m54284U_201015_160726/38666442/ccs	chr16	+	2972	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	598.610983339765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22930014_22930252_22930343_22930566_22930647_22931100
m54284U_201015_160726/38734114/ccs	chr17	+	2463	16	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_6	138.068807322855	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980375	57018764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
m54284U_201015_160726/39454595/ccs	chr10	+	3422	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	348	junction_6	43.3545773496021	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289312	93320737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
m54284U_201015_160726/39782669/ccs	chr5	-	4332	33	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	100.695312196931	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	621	False	NA	-3	True	AATAAA	-31	NA	134343614	134266687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
m54284U_201015_160726/39914193/ccs	chr6	-	227	1	Intergenic	novelGene_3114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTATCTAGATTCTTT	9651	False	NA	-1	True	AATAAA	-15	NA	20960692	20960465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_20960500_20960700
m54284U_201015_160726/39978545/ccs	chr15	-	100	1	Intergenic	novelGene_7797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCGCATGTGTGACCAGC	9392	False	NA	-2	True	NA	NA	NA	77757453	77757353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_77757400_77757500
m54284U_201015_160726/40045198/ccs	chrX	+	1424	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	246	-413	246	413	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTCTCTGTGTGT	NA	False	NA	9	True	AATAAA	-34	NA	12803356	12804780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_12803400_12804800
m54284U_201015_160726/40436377/ccs	chr4	-	5268	6	NIC	ENSMUSG00000050390.13	novel	5187	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	145	junction_5	46.0764581972182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGACTGCTGTTTTCCA	NA	False	NA	0	True	ATTAAA	-28	NA	129142236	129113370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129115271_129115607_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129141913
m54284U_201015_160726/40502667/ccs	chr9	+	3223	1	Antisense	novelGene_ENSMUSG00000032244.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAACCAGATATAGG	NA	False	NA	NA	False	NA	NA	NA	62703410	62706633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_62703400_62706600
m54284U_201015_160726/40567992/ccs	chr2	-	172	1	Intergenic	novelGene_1149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	154750431	154750259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_154750300_154750400
m54284U_201015_160726/40634696/ccs	chr6	-	6519	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	106.381679477225	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTACTATCTTGTATT	7345	False	NA	2	True	NA	NA	NA	85938624	85919249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932387_85935565_85935698_85936197_85936274_85938419
m54284U_201015_160726/40961020/ccs	chr11	+	3571	7	NIC	ENSMUSG00000047821.17	novel	3574	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	12.7017059221718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTGCTAGTATTTG	NA	False	NA	NA	False	TTTAAA	-5	NA	62711294	62733762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_62711464_62711560_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
m54284U_201015_160726/41158860/ccs	chr10	-	177	1	Antisense	novelGene_ENSMUSG00000112255.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAGAGAGAGAGAAAGAG	7395	False	NA	NA	False	NA	NA	NA	61409308	61409131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_-_61409100_61409300
m54284U_201015_160726/41683400/ccs	chr2	-	2687	3	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	70	0	intron_retention	FALSE	canonical	3	12	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCATTCTTGACTTT	NA	False	NA	-6	True	AATAAA	-44	NA	166349921	166341960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_166344399_166347371_166347507_166349807
m54284U_201015_160726/42009342/ccs	chr10	+	3791	10	NNC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_1	76.1253028131584	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTCAACCCTTTACAG	883	False	NA	30	True	AATAAA	-21	NA	81193385	81202059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_81193721_81196034_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
m54284U_201015_160726/42404438/ccs	chr6	+	241	1	Intergenic	novelGene_3566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTATTAGGATGAGCT	NA	False	NA	NA	False	NA	NA	NA	140475353	140475594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_140475400_140475600
m54284U_201015_160726/42731999/ccs	chr16	-	159	1	Intergenic	novelGene_8257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAGTAAAATAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	40067174	40067015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_40067000_40067200
m54284U_201015_160726/43256119/ccs	chr9	+	2552	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	0	-682	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	82.5432984674326	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695997	14745260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702026_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
m54284U_201015_160726/4328130/ccs	chr1	+	191	1	Intergenic	novelGene_559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATATGTAATAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	192124588	192124779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_192124600_192124800
m54284U_201015_160726/43451310/ccs	chr19	+	3213	12	NIC	ENSMUSG00000024949.18	novel	3221	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_2	420.443508454647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6425687
m54284U_201015_160726/43647531/ccs	chr8	+	188	1	Intergenic	novelGene_4263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGGCTTGCTTCTGGTT	NA	False	NA	NA	False	NA	NA	NA	34411289	34411477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_34411300_34411500
m54284U_201015_160726/43648540/ccs	chr7	-	2255	16	NIC	ENSMUSG00000038520.16	novel	8750	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	189	junction_4	25.5217554255188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCTGGCTGGCATCAGG	7867	False	NA	-10	True	AATAAA	-15	NA	44498335	44490455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
m54284U_201015_160726/4393671/ccs	chr5	+	200	1	Intergenic	novelGene_3011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	139470811	139471011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_139470800_139471000
m54284U_201015_160726/43974924/ccs	chr10	+	188	1	Intergenic	novelGene_5401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAATTTTGA	NA	False	NA	NA	False	NA	NA	NA	74638625	74638813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_74638600_74638800
m54284U_201015_160726/44042246/ccs	chr11	-	175	1	Intergenic	novelGene_6374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATGGAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	104816958	104816783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_104816800_104817000
m54284U_201015_160726/44434554/ccs	chr17	+	1402	1	NIC	ENSMUSG00000024301.11	novel	819	3	NA	NA	0	-3016	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAGGAAAACAAACCC	NA	False	NA	NA	False	NA	NA	NA	27136064	27137466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_27136100_27137500
m54284U_201015_160726/44500965/ccs	chr10	+	184	1	Intergenic	novelGene_5528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGCAAATTGGAAATG	NA	False	NA	NA	False	NA	NA	NA	107514355	107514539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_107514400_107514500
m54284U_201015_160726/44566451/ccs	chr7	-	192	1	Intergenic	novelGene_4108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGCTGGGAGCTGGGCG	NA	False	NA	NA	False	NA	NA	NA	127451697	127451505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127451500_127451700
m54284U_201015_160726/44630103/ccs	chr17	-	189	1	Intergenic	novelGene_8446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATCAAAACAGGGGC	NA	False	NA	NA	False	NA	NA	NA	27275053	27274864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_27274900_27275100
m54284U_201015_160726/44892424/ccs	chr2	+	174	1	Intergenic	novelGene_881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATATATGTGAATGTC	NA	False	NA	NA	False	NA	NA	NA	77519938	77520112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_77519900_77520100
m54284U_201015_160726/44894802/ccs	chr10	+	173	1	Intergenic	novelGene_5548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAATAA	8991	False	NA	NA	False	NA	NA	NA	116817795	116817968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_116817800_116818000
m54284U_201015_160726/4523710/ccs	chr11	+	2513	1	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	0	-46831	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCTTTGTGTATAATTGG	NA	False	NA	NA	False	NA	NA	NA	70735603	70738116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70735600_70738100
m54284U_201015_160726/45353217/ccs	chr10	-	950	6	NNC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	453.605114609613	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634128	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_80632357_80632424_80632511_80632565_80632657_80633606_80633674_80633743_80633812_80633914
m54284U_201015_160726/46139880/ccs	chr12	+	350	1	Intergenic	novelGene_6933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACTGAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112953715	112954065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_112953700_112954100
m54284U_201015_160726/46140181/ccs	chr9	+	155	1	Intergenic	novelGene_4699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAATCTA	9375	False	NA	NA	False	NA	NA	NA	32087610	32087765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_32087600_32087800
m54284U_201015_160726/46269846/ccs	chr5	-	3125	9	NIC	ENSMUSG00000037373.13	novel	2436	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_1	210.516886199184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432338	33405066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_33406028_33406450_33406569_33406930_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
m54284U_201015_160726/4654920/ccs	chr1	-	224	1	Intergenic	novelGene_530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATCCCAAATACACTTGA	6341	False	NA	NA	False	NA	NA	NA	181930885	181930661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_181930700_181930900
m54284U_201015_160726/46596161/ccs	chr4	-	184	1	Intergenic	novelGene_1896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGATGAAATAAATATA	NA	False	NA	NA	False	NA	NA	NA	64939933	64939749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_64939700_64939900
m54284U_201015_160726/46729430/ccs	chr11	+	2428	6	NIC	ENSMUSG00000020349.5	novel	7102	7	NA	NA	143	3047	intron_retention	FALSE	canonical	3	1809	junction_5	140.67636617428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGGCAACTCCTTGG	NA	False	NA	24	True	AATAAA	-20	NA	51989650	52013566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_51989978_52003946_52004157_52008813_52009586_52009969_52010132_52011759_52011879_52012728
m54284U_201015_160726/46792856/ccs	chr11	-	180	1	Intergenic	novelGene_5966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	70527670	70527490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_70527500_70527700
m54284U_201015_160726/47252960/ccs	chr16	+	176	1	Intergenic	novelGene_8107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAACCTTTTGCC	4580	False	NA	NA	False	NA	NA	NA	17410862	17411038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17410900_17411000
m54284U_201015_160726/47319558/ccs	chr8	+	3271	7	NNC	ENSMUSG00000019261.4	novel	3323	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	105.992793256062	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTTACTGTCTTAT	NA	False	NA	15	True	AATAAA	-15	NA	71358625	71370173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_71358777_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
m54284U_201015_160726/47645600/ccs	chr11	+	170	1	Intergenic	novelGene_5846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGAATATGAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	54749468	54749638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_54749500_54749600
m54284U_201015_160726/47646884/ccs	chr11	-	2803	12	NNC	ENSMUSG00000046605.15	novel	2864	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	27.8256080402552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGACTATAACATTCATA	NA	False	NA	2	True	AATAAA	-26	NA	121563979	121507022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121561695_121561796_121561882_121562000_121563806
m54284U_201015_160726/47842463/ccs	chr13	+	167	1	Intergenic	novelGene_7308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAATGGGTAGTAGGA	7296	False	NA	NA	False	NA	NA	NA	113044908	113045075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_113044900_113045100
m54284U_201015_160726/47844037/ccs	chr5	+	176	1	Intergenic	novelGene_2522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTTT	NA	False	NA	NA	False	NA	NA	NA	31651061	31651237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_31651100_31651200
m54284U_201015_160726/47908747/ccs	chr1	+	193	1	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCATGGTCATGGTA	NA	False	NA	NA	False	NA	NA	NA	13515536	13515729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_13515500_13515700
m54284U_201015_160726/48499100/ccs	chr3	+	159	1	Intergenic	novelGene_1527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATTAATTAATA	8368	False	NA	NA	False	NA	NA	NA	89807726	89807885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89807700_89807900
m54284U_201015_160726/48956432/ccs	chr15	+	178	1	Intergenic	novelGene_7786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAATAGGTA	8373	False	NA	NA	False	NA	NA	NA	76826660	76826838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76826700_76826800
m54284U_201015_160726/49545903/ccs	chr5	+	211	1	Intergenic	novelGene_2556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGACAGAGTTTCTCTG	NA	False	NA	NA	False	NA	NA	NA	35699579	35699790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_35699600_35699800
m54284U_201015_160726/49547293/ccs	chr2	+	5574	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2453	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	17.4418788568484	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155455584	155476123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_155455660_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
m54284U_201015_160726/49744161/ccs	chr15	-	172	1	Intergenic	novelGene_7989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100180748	100180576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100180600_100180700
m54284U_201015_160726/4983517/ccs	chr5	+	171	1	Intergenic	novelGene_2871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAAAAAGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	122797236	122797407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_122797200_122797400
m54284U_201015_160726/5047289/ccs	chr8	-	2154	1	NIC	ENSMUSG00000090137.9	novel	711	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTCTAGAGTGACTG	NA	False	NA	-5	True	AATAAA	-27	NA	70963067	70960913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70960900_70963100
m54284U_201015_160726/50726494/ccs	chr14	+	1074	1	Intergenic	novelGene_7570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACCAAGATGGCGACCGC	NA	False	NA	NA	False	NA	NA	NA	93452678	93453752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_93452700_93453800
m54284U_201015_160726/51054793/ccs	chr7	+	189	1	Intergenic	novelGene_3956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCAGACCCAGTCCT	9818	False	NA	NA	False	NA	NA	NA	97121500	97121689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_97121500_97121700
m54284U_201015_160726/51054865/ccs	chr2	-	163	1	Intergenic	novelGene_715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATGTTTTTAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	32212834	32212671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32212700_32212800
m54284U_201015_160726/51381279/ccs	chr14	+	215	1	Intergenic	novelGene_7389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGGAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	34027339	34027554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_34027300_34027600
m54284U_201015_160726/51446470/ccs	chr6	+	177	1	Intergenic	novelGene_3283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATTCATCACAT	1389	False	NA	NA	False	NA	NA	NA	54457593	54457770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_54457600_54457800
m54284U_201015_160726/51841692/ccs	chr1	+	4267	1	Intergenic	novelGene_270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATGAAGCAGTAACATTA	NA	False	NA	NA	False	NA	NA	NA	113886496	113890763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_113886500_113890800
m54284U_201015_160726/51971386/ccs	chr12	+	198	1	Intergenic	novelGene_6652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTACCTTAAGTATTTG	NA	False	NA	NA	False	NA	NA	NA	55297118	55297316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_55297100_55297300
m54284U_201015_160726/52166708/ccs	chr17	+	145	1	Intergenic	novelGene_8675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAATGTAACAA	NA	False	NA	14	True	NA	NA	NA	65863646	65863791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_65863600_65863800
m54284U_201015_160726/527184/ccs	chr5	-	2735	1	ISM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	39382	4670	38929	-4670	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTTTTTGGTGAATT	NA	False	NA	NA	False	AATGAA	-13	NA	75166053	75163318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_75163300_75166100
m54284U_201015_160726/52953340/ccs	chr11	-	3056	1	Antisense	novelGene_ENSMUSG00000084941.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAATATGTCTTT	3680	False	NA	NA	False	NA	NA	NA	3262720	3259664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_3259700_3262700
m54284U_201015_160726/53086470/ccs	chr17	+	246	1	Intergenic	novelGene_8712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTGAAAAAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	71842811	71843057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71842800_71843100
m54284U_201015_160726/5309500/ccs	chr9	+	178	1	Intergenic	novelGene_4939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCCTTCTGATGCTAT	484	False	NA	NA	False	NA	NA	NA	72748494	72748672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72748500_72748700
m54284U_201015_160726/53346887/ccs	chr8	-	3236	15	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	38	junction_8	888.817492916451	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTACTTGGCTTCACTGG	NA	False	NA	-12	True	AATAAA	-19	NA	26337722	26306903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321394_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
m54284U_201015_160726/53477962/ccs	chr3	+	171	1	Intergenic	novelGene_1569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	95464442	95464613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95464400_95464600
m54284U_201015_160726/53676758/ccs	chr12	-	3944	1	Antisense	novelGene_ENSMUSG00000061458.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACTATAGTTGCTGACT	7072	False	NA	NA	False	NA	NA	NA	17452302	17448358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_-_17448400_17452300
m54284U_201015_160726/53742161/ccs	chr3	-	1007	7	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	2	40	junction_2	658.965456015884	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATTGAACGGAACCTA	NA	False	NA	-1	True	AATAAA	-22	NA	129624784	129618560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_129618859_129619196_129619266_129620475_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
m54284U_201015_160726/53807903/ccs	chr11	-	1896	2	Antisense	novelGene_ENSMUSG00000018411.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	-7	True	NA	NA	NA	104180058	104177048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_104178875_104179988
m54284U_201015_160726/54068230/ccs	chr12	-	772	1	NIC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-59	-26337	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGTTTTGACTCGGT	NA	False	NA	NA	False	GATAAA	-14	NA	4957498	4956726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_4956700_4957500
m54284U_201015_160726/54200867/ccs	chr1	-	191	1	Intergenic	novelGene_178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTACGAAATGTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	72750015	72749824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_72749800_72750000
m54284U_201015_160726/54265867/ccs	chr1	-	7315	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	800	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_41	264.427688375359	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTTATAGTTCTGT	8467	False	NA	-6	True	AATAAA	-17	NA	84816452	84701184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816331
m54284U_201015_160726/54266041/ccs	chr14	-	2537	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_12	135.990706381805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3758	False	NA	-1	True	AATAAA	-24	NA	54891138	54879618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
m54284U_201015_160726/55052133/ccs	chr1	+	2924	1	NIC	ENSMUSG00000073676.5	novel	774	4	NA	NA	0	-70	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCATTGTCTCTGACCTT	NA	False	NA	32	True	AATAAA	-20	NA	55127472	55130396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_55127500_55130400
m54284U_201015_160726/5507362/ccs	chr16	+	3361	17	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	287	junction_1	39.9538796614296	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688630	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16708126_16708445_16708547_16709218_16709421_16710278
m54284U_201015_160726/55313287/ccs	chr7	+	4093	8	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_4	593.852417590053	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTTAAAAGTTGGGT	NA	False	NA	16	True	AATAAA	-11	NA	131162119	131172893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131164026_131164092_131165062_131168081_131169912_131170091_131170233_131170451_131172607
m54284U_201015_160726/55443686/ccs	chr5	+	181	1	Intergenic	novelGene_2746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACCACCAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	108239272	108239453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108239300_108239500
m54284U_201015_160726/55708459/ccs	chr2	-	172	1	Intergenic	novelGene_1295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTTAAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	174244801	174244629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_174244600_174244800
m54284U_201015_160726/5572959/ccs	chr3	-	172	1	Intergenic	novelGene_1452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTTAAAAAAAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	85503138	85502966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_85503000_85503100
m54284U_201015_160726/55903600/ccs	chr11	+	239	1	Intergenic	novelGene_5831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGAATCACTAACTTG	NA	False	NA	NA	False	NA	NA	NA	53238565	53238804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53238600_53238800
m54284U_201015_160726/55904876/ccs	chr3	-	181	1	Intergenic	novelGene_1591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGGTGAACTTC	NA	False	NA	-7	True	NA	NA	NA	97957572	97957391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_97957400_97957600
m54284U_201015_160726/56361880/ccs	chr7	+	1990	6	NNC	ENSMUSG00000045411.17	novel	1982	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	324.315032029044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896233_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201015_160726/56363529/ccs	chr6	+	4353	1	Intergenic	novelGene_3522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	7881	False	NA	NA	False	NA	NA	NA	127080787	127085140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_127080800_127085100
m54284U_201015_160726/56429310/ccs	chr16	+	173	1	Intergenic	novelGene_8264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	44503938	44504111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_44503900_44504100
m54284U_201015_160726/56624816/ccs	chr12	+	450	1	Intergenic	novelGene_6613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGGAGTGAGAGAATAGC	NA	False	NA	NA	False	NA	NA	NA	31386833	31387283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_31386800_31387300
m54284U_201015_160726/5702600/ccs	chr9	+	3844	15	NIC	ENSMUSG00000032264.10	novel	2863	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	236	junction_11	30.9756322924709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTCTTTAATAACAT	NA	False	NA	23	True	AGTAAA	-19	NA	48966912	48990075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
m54284U_201015_160726/57346351/ccs	chr2	+	186	1	Intergenic	novelGene_1249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCCCACAATAACAGAG	NA	False	NA	NA	False	NA	NA	NA	167109196	167109382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_167109200_167109400
m54284U_201015_160726/57411616/ccs	chr9	-	194	1	Intergenic	novelGene_4657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGGGCTGGAGAGATG	8166	False	NA	NA	False	NA	NA	NA	21134917	21134723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21134700_21134900
m54284U_201015_160726/57802962/ccs	chr15	+	184	1	Intergenic	novelGene_7828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTCGAGGAGGGGAGTG	NA	False	NA	NA	False	NA	NA	NA	80886527	80886711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_80886500_80886700
m54284U_201015_160726/57868344/ccs	chrX	-	171	1	Intergenic	novelGene_9361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGGGTTTCTA	NA	False	NA	NA	False	NA	NA	NA	5652785	5652614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_5652600_5652800
m54284U_201015_160726/58001999/ccs	chr17	+	164	1	Intergenic	novelGene_8640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCCATTTTCCTATTT	NA	False	NA	NA	False	NA	NA	NA	50575930	50576094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_50575900_50576100
m54284U_201015_160726/58392993/ccs	chr7	+	181	1	Intergenic	novelGene_3696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGCAGAGAGCATCACA	NA	False	NA	NA	False	NA	NA	NA	22927955	22928136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_22928000_22928100
m54284U_201015_160726/58458962/ccs	chr16	-	5137	31	NNC	ENSMUSG00000022710.18	novel	4003	31	NA	NA	-511	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	196.202786252727	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGCTGTGGAAGCCGAG	6021	False	NA	NA	False	AATAAA	-26	NA	8556795	8507458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511837_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
m54284U_201015_160726/58460363/ccs	chr4	+	177	1	Intergenic	novelGene_1983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACACATCT	5643	False	NA	NA	False	NA	NA	NA	107789353	107789530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_107789400_107789500
m54284U_201015_160726/59114338/ccs	chr11	-	3887	3	NIC	ENSMUSG00000001034.18	novel	3255	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	225	junction_1	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385092	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61380324_61380674_61382513_61383729
m54284U_201015_160726/59181634/ccs	chr10	+	194	1	Intergenic	novelGene_5605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGAGGGCCGGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	127315467	127315661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_127315500_127315700
m54284U_201015_160726/59245303/ccs	chr10	+	4117	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	17.1001527745659	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62816030	62849734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831091_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
m54284U_201015_160726/59770640/ccs	chr11	-	2832	12	NIC	ENSMUSG00000025377.15	novel	2770	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_10	8.80176541269791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCCACTTGGGCTGGT	NA	False	NA	-8	True	AATAAA	-16	NA	119989526	119981356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119982839_119983676_119983812_119984070_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
m54284U_201015_160726/59968110/ccs	chr17	-	188	1	Intergenic	novelGene_8664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACGGGAGGCACTATG	NA	False	NA	NA	False	NA	NA	NA	57427323	57427135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_57427100_57427300
m54284U_201015_160726/60032970/ccs	chr17	-	3244	10	NIC	ENSMUSG00000024222.18	novel	3543	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	178.430260955622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28705067	28618070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_28620126_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
m54284U_201015_160726/60687217/ccs	chr15	+	4765	12	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	-2087	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	235.916500146391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	52	False	NA	25	True	AATAAA	-26	NA	34082864	34143683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
m54284U_201015_160726/60754558/ccs	chr7	+	161	1	Intergenic	novelGene_4155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	140600259	140600420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140600300_140600400
m54284U_201015_160726/60884868/ccs	chr13	-	3112	15	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_13	70.6039904636257	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	-4	True	AATAAA	-19	NA	100969935	100939155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100965407_100965531_100969608
m54284U_201015_160726/61147977/ccs	chr2	-	2714	12	NIC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	244.471533268216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965543	124929661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
m54284U_201015_160726/61212565/ccs	chr9	-	986	10	NIC	ENSMUSG00000032314.15	novel	828	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	512.416304517921	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTATGATTTATTACT	NA	False	NA	NA	False	ATTAAA	-33	NA	55419404	55381820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_55381940_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
m54284U_201015_160726/61407515/ccs	chr7	+	5254	1	Antisense	novelGene_ENSMUSG00000041328.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGAACTATCAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	92310035	92315289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_92310000_92315300
m54284U_201015_160726/61409614/ccs	chr17	-	3128	7	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	75	junction_4	786.026381378019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512511_80512690_80512868_80513276_80513458_80514603
m54284U_201015_160726/61672099/ccs	chr11	+	187	1	Intergenic	novelGene_5680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATACTGATCAACTTCCC	NA	False	NA	NA	False	NA	NA	NA	5628026	5628213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_5628000_5628200
m54284U_201015_160726/62521903/ccs	chr13	+	3734	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	190	junction_14	78.20472870509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
m54284U_201015_160726/62522500/ccs	chr8	-	180	1	Intergenic	novelGene_4249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGCGCATTTGTGTAAG	NA	False	NA	NA	False	NA	NA	NA	27647008	27646828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_27646800_27647000
m54284U_201015_160726/62719786/ccs	chr12	-	556	5	NNC	ENSMUSG00000021276.11	novel	445	4	NA	NA	0	785	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	173.897060067156	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGACCTTACGGAGGCA	3370	False	NA	NA	False	NA	NA	NA	110855558	110842609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_110842678_110843274_110843405_110846118_110846249_110850323_110850493_110855499
m54284U_201015_160726/62850175/ccs	chr13	+	188	1	Intergenic	novelGene_7210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGCAAAGACTTAATAA	NA	False	NA	NA	False	NA	NA	NA	74942941	74943129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_74942900_74943100
m54284U_201015_160726/63243916/ccs	chr9	-	3232	9	NIC	ENSMUSG00000032096.17	novel	4072	10	NA	NA	0	-576	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	348.030507822231	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTACTGGACTCTAAC	NA	False	NA	-17	True	AATAAA	-18	NA	44679142	44653436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44678966
m54284U_201015_160726/63375119/ccs	chr5	+	198	1	Intergenic	novelGene_2805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	310	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCAGGGGCTGGGGCTG	7301	False	NA	NA	False	NA	NA	NA	115639346	115639544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115639300_115639500
m54284U_201015_160726/63504518/ccs	chr3	-	192	1	Intergenic	novelGene_1416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTAAAAAAAGACC	NA	False	NA	NA	False	NA	NA	NA	58609910	58609718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_58609700_58609900
m54284U_201015_160726/63505117/ccs	chr4	+	3047	1	NIC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	0	-9008	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGGAGCTGAGCAGTTA	38	True	NA	NA	False	TATAAA	-37	NA	48540498	48543545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_48540500_48543500
m54284U_201015_160726/6358427/ccs	chr6	+	162	1	Intergenic	novelGene_3562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCCAGAGCAAACAGTGA	NA	False	NA	NA	False	NA	NA	NA	138948357	138948519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_138948400_138948500
m54284U_201015_160726/63701447/ccs	chrX	-	207	1	Intergenic	novelGene_9612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCATGGTTATTTCATG	NA	False	NA	NA	False	NA	NA	NA	110291734	110291527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_110291500_110291700
m54284U_201015_160726/63703667/ccs	chr11	+	1322	10	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	1158.56553494631	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068547	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_9068661_9069373_9069450_9069892_9070001_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
m54284U_201015_160726/63769044/ccs	chr18	+	3108	1	Intergenic	novelGene_9023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCACATCCTTCTGTTA	NA	False	NA	NA	False	NA	NA	NA	75644491	75647599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_75644500_75647600
m54284U_201015_160726/64226349/ccs	chr1	+	177	1	Intergenic	novelGene_122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52730566	52730743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_52730600_52730700
m54284U_201015_160726/6423629/ccs	chr13	-	2180	6	Fusion	ENSMUSG00000113450.2_ENSMUSG00000113623.2	novel	633	4	NA	NA	0	817	multi-exon	FALSE	canonical	1	2	junction_3	54.6355195820448	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTAGGCATGTAAA	9538	False	NA	NA	False	AATAAA	-20	NA	62614620	62549489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr13_-_62551194_62555228_62555290_62555482_62555610_62604500_62604562_62604746_62604874_62614520
m54284U_201015_160726/64358180/ccs	chr8	-	3504	12	NNC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_3	465.909294900177	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448984	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_70362625_70364326_70364520_70365572_70365872_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
m54284U_201015_160726/64487775/ccs	chr17	+	165	1	Intergenic	novelGene_8759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	84388764	84388929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_84388800_84388900
m54284U_201015_160726/64685962/ccs	chr7	-	2877	1	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534686	127531809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_127531800_127534700
m54284U_201015_160726/65014243/ccs	chr14	+	3878	1	Antisense	novelGene_ENSMUSG00000060373.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGAGAGCCAGGAGTGGT	7435	False	NA	NA	False	NA	NA	NA	52335544	52339422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_52335500_52339400
m54284U_201015_160726/65407491/ccs	chr3	+	4134	20	NNC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	5002.46822568924	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927922	102965502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950875_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
m54284U_201015_160726/6555588/ccs	chr5	+	2704	13	NIC	ENSMUSG00000037313.17	novel	2669	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	792	junction_6	79.6252943479646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815929	33829545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008
m54284U_201015_160726/65732813/ccs	chr4	+	186	1	Intergenic	novelGene_2212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACATCCACATCGGACCT	NA	False	NA	NA	False	NA	NA	NA	132851206	132851392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132851200_132851400
m54284U_201015_160726/65733883/ccs	chr5	+	1475	6	NIC	ENSMUSG00000025532.14	novel	1492	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	143.923034987454	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGCCACCATACCTGG	NA	False	NA	5	True	AAAACA	-1	NA	130058151	130089630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071146_130077766_130077825_130088545
m54284U_201015_160726/657704/ccs	chr10	+	167	1	Intergenic	novelGene_5437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79402449	79402616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_79402400_79402600
m54284U_201015_160726/65798645/ccs	chr17	+	172	1	Intergenic	novelGene_8776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	87961398	87961570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_87961400_87961600
m54284U_201015_160726/65801007/ccs	chr2	-	3897	18	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	502.37788200933	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627994	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
m54284U_201015_160726/65931625/ccs	chr6	+	176	1	Intergenic	novelGene_3245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGTTAAATTATAT	5341	False	NA	NA	False	NA	NA	NA	47460344	47460520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_47460300_47460500
m54284U_201015_160726/65996699/ccs	chr5	-	190	1	Intergenic	novelGene_2595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTAGAGACTCAAGTTA	9904	False	NA	NA	False	NA	NA	NA	66141029	66140839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_66140800_66141000
m54284U_201015_160726/65997362/ccs	chr1	-	5064	1	ISM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	118214	0	5391	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATTTGTATTCATTTTTC	NA	False	NA	0	True	AATAAA	-24	NA	181729012	181723948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_181723900_181729000
m54284U_201015_160726/66783590/ccs	chr1	+	180	1	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTAGATGGGGTCC	6700	False	NA	NA	False	NA	NA	NA	34131324	34131504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_34131300_34131500
m54284U_201015_160726/67242111/ccs	chr1	-	226	1	Intergenic	novelGene_540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAAAGTTTTCCAGGT	NA	False	NA	NA	False	NA	NA	NA	185060298	185060072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_185060100_185060300
m54284U_201015_160726/67438948/ccs	chr3	+	1639	16	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_2	105.894412820822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466988	95494907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_95467035_95467121_95467381_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
m54284U_201015_160726/67635738/ccs	chr4	-	2618	1	Intergenic	novelGene_2227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGTACTCCTGGCTGTA	NA	False	NA	NA	False	NA	NA	NA	133703000	133700382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_133700400_133703000
m54284U_201015_160726/67700053/ccs	chr11	+	189	1	Intergenic	novelGene_5928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	5881	False	NA	NA	False	NA	NA	NA	68620100	68620289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68620100_68620300
m54284U_201015_160726/68288676/ccs	chr10	+	911	11	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_5	1587.69859860113	263	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657776	128713498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684107_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
m54284U_201015_160726/68291365/ccs	chr10	+	178	1	Intergenic	novelGene_5420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGTCAAC	6680	False	NA	NA	False	NA	NA	NA	75900127	75900305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75900100_75900300
m54284U_201015_160726/68946039/ccs	chr7	-	196	1	Intergenic	novelGene_3969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCAGCCATTTAGCTAG	7704	False	NA	NA	False	NA	NA	NA	99154517	99154321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_99154300_99154500
m54284U_201015_160726/69143063/ccs	chr11	-	181	1	Intergenic	novelGene_6008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTTAAAAAAAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	75366917	75366736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75366700_75366900
m54284U_201015_160726/69535295/ccs	chr14	+	1756	6	NNC	ENSMUSG00000041765.7	novel	688	5	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	167.24281748404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	2075	False	NA	16	True	AATAAA	-16	NA	122183790	122258446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_122183921_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
m54284U_201015_160726/7013152/ccs	chr13	+	176	1	Intergenic	novelGene_7203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	5123	False	NA	NA	False	NA	NA	NA	73768844	73769020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_73768800_73769000
m54284U_201015_160726/70321715/ccs	chr4	+	3526	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	396.146212494232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	570	False	NA	8	True	AATAAA	-20	NA	137321517	137383642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348374_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201015_160726/70387007/ccs	chr11	+	179	1	Intergenic	novelGene_5664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACCCAAAAGGGGAG	NA	False	NA	NA	False	NA	NA	NA	4475497	4475676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4475500_4475700
m54284U_201015_160726/70582402/ccs	chr13	-	171	1	Intergenic	novelGene_7096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAAAATAAAT	3989	False	NA	NA	False	NA	NA	NA	55397203	55397032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55397000_55397200
m54284U_201015_160726/70977521/ccs	chr7	+	223	1	Intergenic	novelGene_4148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGAAGATGTTTCTG	8482	False	NA	NA	False	NA	NA	NA	139078998	139079221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_139079000_139079200
m54284U_201015_160726/71042050/ccs	chr3	-	2279	6	NNC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	0	-5430	intron_retention	FALSE	canonical	3	11	junction_5	45.5692879031481	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACTGATGGAGTGTTA	NA	False	NA	-27	True	AATAAA	-20	NA	32419827	32394374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419736
m54284U_201015_160726/71174827/ccs	chr7	+	183	1	Intergenic	novelGene_3981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATTACATGAGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	100633170	100633353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_100633200_100633400
m54284U_201015_160726/71436488/ccs	chr11	-	173	1	Intergenic	novelGene_6496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	118252434	118252261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_118252300_118252400
m54284U_201015_160726/71699180/ccs	chr18	+	2786	1	Antisense	novelGene_ENSMUSG00000057440.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTCCTGGATGAGGTG	NA	False	NA	NA	False	NA	NA	NA	7456558	7459344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_+_7456600_7459300
m54284U_201015_160726/72025432/ccs	chr11	+	190	1	Intergenic	novelGene_6468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTAGTGGCTTGTCTCTC	NA	False	NA	NA	False	NA	NA	NA	116129995	116130185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_116130000_116130200
m54284U_201015_160726/722513/ccs	chr10	+	152	1	Intergenic	novelGene_5560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTATTAAAAAAAAGAAACAA	NA	False	NA	NA	False	NA	NA	NA	117693596	117693748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_117693600_117693700
m54284U_201015_160726/72353416/ccs	chr19	+	2224	8	NIC	ENSMUSG00000024785.8	novel	1803	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	369	junction_1	17.8885438199983	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	False	NA	27	True	CATAAA	-19	NA	29078774	29121243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
m54284U_201015_160726/72614327/ccs	chr15	+	196	1	Intergenic	novelGene_7763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTCTCTGGAGAATA	NA	False	NA	NA	False	NA	NA	NA	75722443	75722639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_75722400_75722600
m54284U_201015_160726/7275615/ccs	chr7	+	181	1	Intergenic	novelGene_3887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	67914964	67915145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_67915000_67915100
m54284U_201015_160726/72944185/ccs	chr4	+	206	1	Intergenic	novelGene_1934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATACAATTTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	92489097	92489303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_92489100_92489300
m54284U_201015_160726/73861243/ccs	chr10	+	187	1	Intergenic	novelGene_5394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATGCCAGGGGCCAAGG	NA	False	NA	NA	False	NA	NA	NA	70881900	70882087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_70881900_70882100
m54284U_201015_160726/74187331/ccs	chr2	-	4141	16	NNC	ENSMUSG00000039686.15	novel	4189	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	21.4140141029187	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGTGGTGTCTTTTCTT	NA	False	NA	-2	True	AATACA	-17	NA	30014597	29987294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014338
m54284U_201015_160726/74189552/ccs	chr17	+	3876	4	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	451	junction_3	45.3455865793158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_23945616_23951310_23954695_23955297_23955376_23955468
m54284U_201015_160726/74514435/ccs	chr6	+	166	1	Intergenic	novelGene_3411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATTATTTTTATT	NA	False	NA	NA	False	NA	NA	NA	100145916	100146082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_100145900_100146100
m54284U_201015_160726/75106563/ccs	chr2	-	262	1	Intergenic	novelGene_1259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTAATAGATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-33	NA	168153069	168152807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168152800_168153100
m54284U_201015_160726/7537969/ccs	chr2	+	7316	26	NIC	ENSMUSG00000035168.17	novel	7422	27	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_1	32.7975608849195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	NA	False	NA	11	True	AATAAA	-13	NA	59442385	59676059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_59442541_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
m54284U_201015_160726/75498701/ccs	chr10	-	188	1	Intergenic	novelGene_5628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTTCACTGAAAAAAAAAAAA	2998	False	NA	NA	False	NA	NA	NA	128208807	128208619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128208600_128208800
m54284U_201015_160726/75630477/ccs	chrX	+	185	1	Intergenic	novelGene_9718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATATATCCATAGCA	NA	False	NA	NA	False	NA	NA	NA	161503744	161503929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_161503700_161503900
m54284U_201015_160726/76808468/ccs	chr7	+	174	1	Intergenic	novelGene_3961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTCACATAATTT	NA	False	NA	NA	False	NA	NA	NA	97930228	97930402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_97930200_97930400
m54284U_201015_160726/76875602/ccs	chr15	-	166	1	Intergenic	novelGene_7810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATCAGACTTA	NA	False	NA	NA	False	NA	NA	NA	79243675	79243509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_79243500_79243700
m54284U_201015_160726/77465538/ccs	chr5	-	3477	1	Intergenic	novelGene_2538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAGAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	33692964	33689487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_33689500_33693000
m54284U_201015_160726/77727438/ccs	chr17	-	189	1	Intergenic	novelGene_8741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAACTTTCTTCATTTAT	NA	False	NA	-1	True	NA	NA	NA	80521606	80521417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_80521400_80521600
m54284U_201015_160726/77858691/ccs	chr4	+	260	1	Intergenic	novelGene_2438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTCTCAGAGAACCCTC	NA	False	NA	NA	False	TTTAAA	-2	NA	156054067	156054327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156054100_156054300
m54284U_201015_160726/78315871/ccs	chr11	-	2167	9	NNC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	-180	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	56.9868405862266	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675213	120671571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120672168_120672300_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
m54284U_201015_160726/78447890/ccs	chr1	-	1642	1	ISM	ENSMUSG00000039349.6	ENSMUST00000048308.6	3035	2	9651	0	9651	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGGGCTGTGCCTTCCCT	7149	False	NA	-3	True	AATAAA	-28	NA	184605764	184604122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_184604100_184605800
m54284U_201015_160726/78643745/ccs	chr7	-	199	1	Intergenic	novelGene_3885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTACCTTCATCCTTA	NA	False	NA	NA	False	NA	NA	NA	67884646	67884447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_67884400_67884600
m54284U_201015_160726/7866609/ccs	chr7	+	171	1	Intergenic	novelGene_3790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGCAGGA	NA	False	NA	NA	False	NA	NA	NA	34534811	34534982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_34534800_34535000
m54284U_201015_160726/78708875/ccs	chr5	+	194	1	Intergenic	novelGene_2499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26997006	26997200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_26997000_26997200
m54284U_201015_160726/788433/ccs	chr4	+	176	1	Intergenic	novelGene_2298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	140620445	140620621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_140620400_140620600
m54284U_201015_160726/789342/ccs	chr12	+	194	1	Intergenic	novelGene_6612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAGTAGTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	31288524	31288718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_31288500_31288700
m54284U_201015_160726/78971201/ccs	chr13	+	189	1	Intergenic	novelGene_7144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATCCTTTCCCTGTTAC	NA	False	NA	NA	False	NA	NA	NA	62647226	62647415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62647200_62647400
m54284U_201015_160726/79301366/ccs	chr7	+	198	1	Intergenic	novelGene_4063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAAGGGAAGGTCTAG	NA	False	NA	NA	False	NA	NA	NA	121624513	121624711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_121624500_121624700
m54284U_201015_160726/7931575/ccs	chr9	+	860	5	NIC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	254.098775085595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661838	109672042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109671519
m54284U_201015_160726/79366225/ccs	chr3	-	188	1	Intergenic	novelGene_1512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAGAGTATAAT	NA	False	NA	NA	False	NA	NA	NA	89029436	89029248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89029200_89029400
m54284U_201015_160726/79431585/ccs	chr7	+	177	1	Intergenic	novelGene_4018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAGTCTTTTGCATG	1480	False	NA	NA	False	NA	NA	NA	109705195	109705372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109705200_109705400
m54284U_201015_160726/79432413/ccs	chr7	+	220	1	Intergenic	novelGene_3891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAATCACTGAACGGT	NA	False	NA	NA	False	TTTAAA	-12	NA	73296198	73296418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_73296200_73296400
m54284U_201015_160726/79563401/ccs	chr19	+	4863	22	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	0	0	intron_retention	FALSE	canonical	2	12	junction_15	270.130186133126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1863	False	NA	-56	True	GATAAA	-42	NA	8875434	8894036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
m54284U_201015_160726/79759883/ccs	chr7	+	202	1	Intergenic	novelGene_4165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTTTTCTCTGAGAAG	9114	False	NA	NA	False	NA	NA	NA	140866536	140866738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140866500_140866700
m54284U_201015_160726/79824889/ccs	chr11	-	3266	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9071	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	538.108316233823	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	353	False	NA	-9	True	AATAAA	-19	NA	106615291	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615203
m54284U_201015_160726/80020393/ccs	chr3	+	3812	1	Intergenic	novelGene_1433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAAGATTCTGGTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	70479343	70483155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_70479300_70483200
m54284U_201015_160726/80153301/ccs	chr8	-	194	1	Intergenic	novelGene_4588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTCATCAGCTGATCAA	NA	False	NA	NA	False	NA	NA	NA	124372868	124372674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124372700_124372900
m54284U_201015_160726/80610022/ccs	chr4	+	2443	17	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	51	-374	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	117.154662065792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATTTGGAGTGTGTTTT	7	True	NA	31	True	AATAAA	-32	NA	44300926	44364301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
m54284U_201015_160726/80939399/ccs	chr10	-	183	1	Intergenic	novelGene_5523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTGTTTGTTAAATGT	NA	False	NA	NA	False	NA	NA	NA	98724761	98724578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_98724600_98724800
m54284U_201015_160726/81070345/ccs	chr13	+	157	1	Intergenic	novelGene_7244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAAACACAC	NA	False	NA	NA	False	NA	NA	NA	95485598	95485755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_95485600_95485800
m54284U_201015_160726/81135727/ccs	chr5	-	1341	1	Antisense	novelGene_ENSMUSG00000046079.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATAGCTTTCCGGTGTGTTT	NA	False	NA	NA	False	AAAAAG	-12	NA	105848524	105847183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_105847200_105848500
m54284U_201015_160726/81267435/ccs	chr12	+	186	1	Intergenic	novelGene_6701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	71149338	71149524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_71149300_71149500
m54284U_201015_160726/81856819/ccs	chr3	-	3955	11	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_7	60.1910292319379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865620	65853571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65862550_65862698_65864273_65864384_65864921_65864997_65865228
m54284U_201015_160726/82053902/ccs	chr15	+	4098	1	Intergenic	novelGene_7690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGGGAGCCACTGCTTA	NA	False	NA	NA	False	NA	NA	NA	38068571	38072669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_38068600_38072700
m54284U_201015_160726/82315097/ccs	chr9	+	182	1	Intergenic	novelGene_4628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCTCAACAGGACATGCA	NA	False	NA	NA	False	NA	NA	NA	9128888	9129070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_9128900_9129100
m54284U_201015_160726/8260307/ccs	chr14	+	174	1	Intergenic	novelGene_7459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCGAGGAGGGGGCC	NA	False	NA	NA	False	NA	NA	NA	54777768	54777942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54777800_54777900
m54284U_201015_160726/82971370/ccs	chrX	+	176	1	Intergenic	novelGene_9637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGAGGTGAG	NA	False	NA	NA	False	NA	NA	NA	135054225	135054401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_135054200_135054400
m54284U_201015_160726/83165440/ccs	chr2	-	294	1	Intergenic	novelGene_1219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAGTCAATTT	NA	False	NA	NA	False	CATAAA	-6	NA	164717884	164717590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_164717600_164717900
m54284U_201015_160726/83429640/ccs	chr5	-	187	1	Intergenic	novelGene_2608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTGTTCTCTTCCCA	NA	False	NA	NA	False	NA	NA	NA	72395977	72395790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_72395800_72396000
m54284U_201015_160726/83558769/ccs	chr14	+	173	1	Intergenic	novelGene_7543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTGGTTTTTCGAG	NA	False	NA	NA	False	NA	NA	NA	76068556	76068729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_76068600_76068700
m54284U_201015_160726/83626676/ccs	chr12	+	2069	3	NIC	ENSMUSG00000021040.16	novel	802	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	3665	junction_2	69.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACGTTTTTATTTGAAAT	NA	False	NA	32	True	AATAAA	-19	NA	87490681	87496690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_87490797_87494333_87496171_87496573
m54284U_201015_160726/83690743/ccs	chr5	+	765	2	Intergenic	novelGene_2756	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAAGAAACAGACTGACT	NA	False	NA	NA	False	AGTAAA	-6	NA	110014577	110018015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110014679_110017351
m54284U_201015_160726/84281037/ccs	chr17	+	3559	6	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	438	junction_2	42.4103760888771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_23945616_23951310_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
m54284U_201015_160726/84345361/ccs	chr6	-	156	1	Intergenic	novelGene_3203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	38359932	38359776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38359800_38359900
m54284U_201015_160726/84542076/ccs	chr10	+	183	1	Intergenic	novelGene_5483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCTGTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	84908360	84908543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_84908400_84908500
m54284U_201015_160726/84543255/ccs	chr1	-	187	1	Intergenic	novelGene_98	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCCTAAGAGGA	NA	False	NA	NA	False	NA	NA	NA	39395624	39395437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_39395400_39395600
m54284U_201015_160726/8456854/ccs	chr9	+	145	1	Intergenic	novelGene_4917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	70675404	70675549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_70675400_70675500
m54284U_201015_160726/84607869/ccs	chr8	+	175	1	Intergenic	novelGene_4555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGCCCATACCA	NA	False	NA	NA	False	NA	NA	NA	121317952	121318127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_121318000_121318100
m54284U_201015_160726/84609070/ccs	chr15	+	201	1	Intergenic	novelGene_7612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGAAATTCTGCCATATT	NA	False	NA	NA	False	NA	NA	NA	6163718	6163919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_6163700_6163900
m54284U_201015_160726/84609085/ccs	chr17	+	3425	11	NNC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_2	189.458280368001	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1176	False	NA	12	True	AATAAA	-20	NA	24888660	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_24888948_24895527_24895641_24896033_24896160_24896383_24896596_24896808_24897027_24897569_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
m54284U_201015_160726/84739750/ccs	chrX	-	3740	4	NIC	ENSMUSG00000079432.2	novel	3698	5	NA	NA	0	161	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	101.004950373732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134078381	134068211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_134070935_134071511_134072097_134073399_134073700_134078249
m54284U_201015_160726/85000477/ccs	chr9	+	193	1	Genic_Genomic	ENSMUSG00000025237.17	novel	NA	NA	NA	NA	-127	-3241	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGGACTAGGGATGTGAC	NA	False	NA	NA	False	NA	NA	NA	59528711	59528904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_59528700_59528900
m54284U_201015_160726/8520190/ccs	chr1	-	176	1	Intergenic	novelGene_423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTGGTGTAACT	NA	False	NA	NA	False	NA	NA	NA	159118349	159118173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_159118200_159118300
m54284U_201015_160726/85460978/ccs	chr2	-	3570	1	ISM	ENSMUSG00000054074.10	ENSMUST00000091420.6	4376	2	1144	255	542	-255	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGTTCCATACATTTC	3267	False	NA	-3	True	ATTAAA	-15	NA	18052718	18049148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_18049100_18052700
m54284U_201015_160726/85723619/ccs	chr9	+	1895	6	NIC	ENSMUSG00000032044.5	novel	1821	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	136	junction_5	9.97196068985433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAATTTTTTGAGAT	NA	False	NA	NA	False	NA	NA	NA	35179160	35187261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35184143_35184763_35184862_35186359
m54284U_201015_160726/85723867/ccs	chrX	+	185	1	Intergenic	novelGene_9436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTCTCCATCATCAA	NA	False	NA	NA	False	NA	NA	NA	39200862	39201047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_39200900_39201000
m54284U_201015_160726/86049217/ccs	chr17	+	175	1	Intergenic	novelGene_8644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTATATTCATT	NA	False	NA	NA	False	NA	NA	NA	53781718	53781893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_53781700_53781900
m54284U_201015_160726/86313645/ccs	chr9	-	2567	19	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.189701563019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100668	111057322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
m54284U_201015_160726/86443702/ccs	chr3	-	7578	1	Intergenic	novelGene_1425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-25	NA	67007412	66999834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_66999800_67007400
m54284U_201015_160726/86575356/ccs	chr16	+	179	1	Intergenic	novelGene_8154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACCCAAATCGTTT	5210	False	NA	NA	False	NA	NA	NA	21532674	21532853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_21532700_21532900
m54284U_201015_160726/86575630/ccs	chr11	+	163	1	Intergenic	novelGene_5670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATCTTAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4761684	4761847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4761700_4761800
m54284U_201015_160726/86640811/ccs	chr8	-	3273	15	NIC	ENSMUSG00000031834.16	novel	3165	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	127	junction_14	21.0558053461631	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTTGGGGACTGG	NA	False	NA	-8	True	NA	NA	NA	71229357	71220819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
m54284U_201015_160726/86901963/ccs	chr14	+	6991	17	NIC	ENSMUSG00000021767.20	novel	7699	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	51.8893052564784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21550956	21722201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
m54284U_201015_160726/87033741/ccs	chr13	-	1087	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	115.35888985851	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	False	NA	1	True	AATAAA	-41	NA	100912407	100896181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100896703_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
m54284U_201015_160726/87230138/ccs	chr7	+	183	1	Intergenic	novelGene_3695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGTAGCAAGGGTTGAG	2286	False	NA	NA	False	NA	NA	NA	19667751	19667934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_19667800_19667900
m54284U_201015_160726/87296476/ccs	chr1	+	192	1	Intergenic	novelGene_491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTTTTTTAAAATGTGA	NA	False	NA	NA	False	NA	NA	NA	175713637	175713829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_175713600_175713800
m54284U_201015_160726/87820766/ccs	chr13	+	3494	1	Antisense	novelGene_ENSMUSG00000009470.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAACAGAAACCTATCTAA	2181	False	NA	NA	False	ATTAAA	-30	NA	98979850	98983344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_+_98979800_98983300
m54284U_201015_160726/8782541/ccs	chr2	+	205	1	Intergenic	novelGene_1157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAACCATCACAAAT	8352	False	NA	NA	False	AATAAA	-4	NA	155207969	155208174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155208000_155208200
m54284U_201015_160726/8783398/ccs	chr9	+	139	1	Intergenic	novelGene_4696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAGCAATCA	5906	False	NA	NA	False	NA	NA	NA	31911931	31912070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_31911900_31912100
m54284U_201015_160726/88212129/ccs	chr11	-	219	1	Intergenic	novelGene_5655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAATTCCTTTATTA	1899	False	NA	NA	False	NA	NA	NA	3893254	3893035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_3893000_3893300
m54284U_201015_160726/88541137/ccs	chr16	+	186	1	Intergenic	novelGene_8206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTATGTCTTTTGCTT	1971	False	NA	-2	True	NA	NA	NA	31950603	31950789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31950600_31950800
m54284U_201015_160726/88606387/ccs	chr11	-	4470	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	88.5497957452789	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAACAGTTATAAAACTTT	NA	False	NA	NA	False	AATAAA	-17	NA	86435631	86389696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404121_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
m54284U_201015_160726/89456801/ccs	chr4	-	3568	10	NIC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_9	101.909545949119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTATCAGGCTGTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	149822501	149799839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_149801535_149802476_149802615_149803107_149803402_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149822291
m54284U_201015_160726/89525000/ccs	chr6	+	176	1	Intergenic	novelGene_3266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGCACACTGCAG	NA	False	NA	NA	False	NA	NA	NA	50013235	50013411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_50013200_50013400
m54284U_201015_160726/90439999/ccs	chr13	+	192	1	Intergenic	novelGene_7143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTCAAGACTCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	62637759	62637951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62637800_62638000
m54284U_201015_160726/90573240/ccs	chr8	-	1785	1	FSM	ENSMUSG00000031586.18	ENSMUST00000231942.2	2534	1	-532	1281	-61	-1281	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCCCCTTTGCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	34419952	34418167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_34418200_34420000
m54284U_201015_160726/90704622/ccs	chr8	-	3361	18	NIC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_6	54.2903255319655	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495384	70471216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
m54284U_201015_160726/9110165/ccs	chr9	+	203	1	Intergenic	novelGene_4846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCTGATCTTGAAATGA	NA	False	NA	NA	False	NA	NA	NA	62697896	62698099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_62697900_62698100
m54284U_201015_160726/91359542/ccs	chrX	+	223	1	Intergenic	novelGene_9498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGAGGTGTACTGACAT	NA	False	NA	NA	False	NA	NA	NA	72791917	72792140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_72791900_72792100
m54284U_201015_160726/91949520/ccs	chr8	+	159	1	Intergenic	novelGene_4282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAGAGAATCACCTCT	NA	False	NA	NA	False	NA	NA	NA	45686199	45686358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_45686200_45686400
m54284U_201015_160726/92146429/ccs	chr4	-	240	2	Antisense	novelGene_ENSMUSG00000082841.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAGTTCTGGCAGAAGC	NA	False	NA	NA	False	NA	NA	NA	116718644	116553441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_116553631_116718593
m54284U_201015_160726/92210391/ccs	chr10	+	176	1	Intergenic	novelGene_5206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGAGCTCTAATACAGA	NA	False	NA	NA	False	NA	NA	NA	17794076	17794252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_17794100_17794300
m54284U_201015_160726/92211333/ccs	chr18	+	3439	1	Antisense	novelGene_ENSMUSG00000036501.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGTTTATTTTTTAAT	NA	False	NA	NA	False	NA	NA	NA	34621160	34624599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_+_34621200_34624600
m54284U_201015_160726/92275367/ccs	chr10	-	178	1	Intergenic	novelGene_5337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGTGCTTCCATT	4720	False	NA	NA	False	NA	NA	NA	61378756	61378578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_61378600_61378800
m54284U_201015_160726/9307961/ccs	chr2	+	3297	20	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	37.3366803670469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126683	32145017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32127215_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
m54284U_201015_160726/9308921/ccs	chrX	-	185	1	Intergenic	novelGene_9635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGACAAAATGATGAAAT	3034	False	NA	NA	False	NA	NA	NA	135022291	135022106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_135022100_135022300
m54284U_201015_160726/93127042/ccs	chr11	-	1482	8	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	0	-127	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	260.48878702022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAATCTGGATAGTCTT	NA	False	NA	-7	True	AATAAA	-18	NA	70538305	70535148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70538116
m54284U_201015_160726/93192552/ccs	chrX	+	2492	1	Intergenic	novelGene_9457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGCTGCGCTGCGCTAG	NA	False	NA	NA	False	NA	NA	NA	50291190	50293682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_50291200_50293700
m54284U_201015_160726/93456191/ccs	chr13	-	5955	10	NIC	ENSMUSG00000005312.16	novel	3686	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	817	junction_3	195.659631396016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	1727	False	NA	-9	True	AATAAA	-13	NA	58363467	58323976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
m54284U_201015_160726/93586989/ccs	chr19	-	174	1	Intergenic	novelGene_9157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAGAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	10104898	10104724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_10104700_10104900
m54284U_201015_160726/9373208/ccs	chrX	+	543	1	Intergenic	novelGene_9735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	165289041	165289584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_165289000_165289600
m54284U_201015_160726/9373967/ccs	chr5	+	191	1	Intergenic	novelGene_2735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	108041900	108042091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108041900_108042100
m54284U_201015_160726/94306315/ccs	chrX	-	168	1	Intergenic	novelGene_9655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTAAAAGATAAGGAA	NA	False	NA	NA	False	NA	NA	NA	143093071	143092903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_143092900_143093100
m54284U_201015_160726/95095079/ccs	chr15	+	1902	9	NIC	ENSMUSG00000009585.19	novel	1953	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	228.012609300451	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGACAAGATTAAGT	8246	False	NA	-6	True	NA	NA	NA	79776603	79792107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790580_79790804_79791051_79791165_79791504
m54284U_201015_160726/95158321/ccs	chr11	-	172	1	Intergenic	novelGene_6528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	5906	False	NA	NA	False	NA	NA	NA	121667218	121667046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_121667000_121667200
m54284U_201015_160726/95421350/ccs	chr14	-	3829	20	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	393	junction_12	28.5575668788288	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTATTGAGTTGCTGA	2527	False	NA	-11	True	AATACA	-24	NA	99337206	99314705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_99314902_99315697_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
m54284U_201015_160726/95554088/ccs	chr2	+	830	3	NIC	ENSMUSG00000086202.2	novel	635	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_1	10	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTTTATATCAGA	NA	False	NA	NA	False	ATTAAA	-17	NA	45586616	45588459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_45586642_45586810_45587155_45587998
m54284U_201015_160726/9569902/ccs	chr9	+	174	1	Intergenic	novelGene_4942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAGTAAAAAA	7134	False	NA	NA	False	NA	NA	NA	72977374	72977548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72977400_72977500
m54284U_201015_160726/95880341/ccs	chr6	+	298	1	Intergenic	novelGene_3311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCTTATTTGTTTTCTAAT	1015	False	NA	NA	False	NA	NA	NA	67237786	67238084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_67237800_67238100
m54284U_201015_160726/96141997/ccs	chr11	-	176	1	Intergenic	novelGene_5678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGAGAGAGAGG	2454	False	NA	NA	False	NA	NA	NA	5077343	5077167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_5077200_5077300
m54284U_201015_160726/96142521/ccs	chr2	+	194	1	Intergenic	novelGene_1296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGGGACAAGCCCCGC	NA	False	NA	NA	False	NA	NA	NA	174661525	174661719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_174661500_174661700
m54284U_201015_160726/96142974/ccs	chr12	-	205	1	Intergenic	novelGene_6803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCCCCAACAAAATAGTA	5838	False	NA	NA	False	NA	NA	NA	84692956	84692751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_84692800_84693000
m54284U_201015_160726/96209107/ccs	chr8	+	189	1	Intergenic	novelGene_4197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGGACAAAGTTAGTT	NA	False	NA	NA	False	NA	NA	NA	11538452	11538641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_11538500_11538600
m54284U_201015_160726/9635715/ccs	chr7	+	180	1	Intergenic	novelGene_3934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTCAGGGATTAAGACAGA	3563	False	NA	NA	False	NA	NA	NA	81575432	81575612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_81575400_81575600
m54284U_201015_160726/96404956/ccs	chr12	-	165	1	Intergenic	novelGene_6908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGAAAAGGCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	111207569	111207404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111207400_111207600
m54284U_201015_160726/96470673/ccs	chr6	+	174	1	Intergenic	novelGene_3167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGCTGCTCTTGCTGA	NA	False	NA	NA	False	NA	NA	NA	35078089	35078263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_35078100_35078300
m54284U_201015_160726/96536596/ccs	chr16	+	1455	1	Intergenic	novelGene_8202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGAGCAAATTCTTGT	NA	False	NA	NA	False	NA	NA	NA	31895466	31896921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31895500_31896900
m54284U_201015_160726/9701461/ccs	chr1	+	2897	6	NIC	ENSMUSG00000026036.18	novel	3769	7	NA	NA	0	138	intron_retention	FALSE	canonical	3	232	junction_2	24.6203168135587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTTTGTTTTGTTTCTT	NA	False	NA	14	True	ATTAAA	-14	NA	58484786	58500681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_58484794_58486792_58487249_58489545_58491375_58494755_58494895_58496938_58497023_58500299
m54284U_201015_160726/97454835/ccs	chr1	-	3702	9	NIC	ENSMUSG00000016481.16	novel	2776	10	NA	NA	0	814	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	81.0361609098062	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGCCTTGATTGTGGT	NA	False	NA	NA	False	NA	NA	NA	194813869	194778875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
m54284U_201015_160726/9767669/ccs	chrX	-	173	1	Intergenic	novelGene_9723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCATGTGTATGCAT	NA	False	NA	NA	False	NA	NA	NA	161631083	161630910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161630900_161631100
m54284U_201015_160726/98044363/ccs	chr11	-	341	1	Intergenic	novelGene_6277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAACAAAA	9010	False	NA	NA	False	NA	NA	NA	97524151	97523810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97523800_97524200
m54284U_201015_160726/983070/ccs	chr15	+	1030	1	FSM	ENSMUSG00000067547.7	ENSMUST00000146631.2	819	1	-66	-145	-66	145	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTATTATTCCAGAAAGAT	NA	False	NA	NA	False	AATAAA	-39	NA	6683337	6684367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_6683300_6684400
m54284U_201015_160726/984771/ccs	chr3	+	3167	1	Antisense	novelGene_ENSMUSG00000027881.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	108811132	108814299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_108811100_108814300
m54284U_201015_160726/99156940/ccs	chr9	+	173	1	Intergenic	novelGene_5085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGCAATCAACTCC	NA	False	NA	NA	False	NA	NA	NA	108277464	108277637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108277500_108277600
m54284U_201015_160726/99614760/ccs	chr18	+	175	1	Intergenic	novelGene_9018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAGACAAAG	NA	False	NA	NA	False	NA	NA	NA	75130952	75131127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_75131000_75131100
m54284U_201015_160726/99748046/ccs	chr17	+	165	1	Intergenic	novelGene_8555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATACTTAAAAA	8311	False	NA	NA	False	NA	NA	NA	35525577	35525742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35525600_35525700
m54284U_201015_160726/99748322/ccs	chr11	-	175	1	Intergenic	novelGene_6501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCTGATATTTAT	NA	False	NA	NA	False	NA	NA	NA	119841076	119840901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_119840900_119841100
m54284U_201016_223608/100204557/ccs	chr11	-	3521	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_1	152.849301898665	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_100239306_100239477_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201016_223608/100205534/ccs	chr7	-	3950	12	NIC	ENSMUSG00000109336.2	novel	4391	13	NA	NA	-57	-713	intron_retention	FALSE	canonical	3	429	junction_11	37.2212504841429	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGCCTTCCC	6543	False	NA	NA	False	NA	NA	NA	28135709	28099686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
m54284U_201016_223608/100270609/ccs	chr5	-	3313	18	NNC	ENSMUSG00000036718.18	novel	3346	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_8	5.0540332997672	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGTTGCCTGTGTGTGTC	NA	False	NA	-4	True	AATAAA	-15	NA	139722091	139692450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139701805_139701837_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
m54284U_201016_223608/100270643/ccs	chr3	+	2844	14	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	37.0059966354407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161602	90171432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_90161866_90164423_90164526_90164601_90164719_90165771_90165834_90166460_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
m54284U_201016_223608/10027378/ccs	chr19	-	2447	11	NNC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	162.400615762379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTGTTTTTAGTT	7439	False	NA	-7	True	AATAAA	-38	NA	55304464	55286732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55303948
m54284U_201016_223608/10027773/ccs	chr9	-	193	1	Intergenic	novelGene_4978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTCACCACCATGTTCT	NA	False	NA	NA	False	NA	NA	NA	81459497	81459304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_81459300_81459500
m54284U_201016_223608/10028090/ccs	chr1	-	209	1	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAGTCTAGAT	NA	False	NA	NA	False	NA	NA	NA	3133751	3133542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_3133500_3133800
m54284U_201016_223608/100338325/ccs	chr4	+	3095	7	NIC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	589.701454598474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4706	False	NA	NA	False	AATAAA	-17	NA	135583442	135593126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589084_135589189_135590350_135590514_135590833_135590888_135591039
m54284U_201016_223608/100468626/ccs	chr5	+	3300	17	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-231	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	49.5961424281163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24656943	24707045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
m54284U_201016_223608/100468676/ccs	chr5	+	3999	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	1953	0	intron_retention	FALSE	canonical	2	22	junction_1	221.180043336301	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32770631	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_32770699_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
m54284U_201016_223608/100468772/ccs	chr1	-	5940	23	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	78.6312137041966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778397	152712746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
m54284U_201016_223608/100599606/ccs	chr4	+	3547	1	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	0	-914	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98812046	98815593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_98812000_98815600
m54284U_201016_223608/100600478/ccs	chr15	+	2665	18	NNC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	83	junction_6	459.921506767778	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	19	True	AAAAAG	-16	NA	81756684	81799334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788130_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
m54284U_201016_223608/100729302/ccs	chr8	-	1557	4	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	338.098933581413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	-17	True	AATAAA	-1	NA	65186615	65171172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_65172216_65173375_65173531_65180657_65180943_65186541
m54284U_201016_223608/100729687/ccs	chr11	-	2406	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	304	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_5	125.171983727207	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGGTTTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	95896766	95853957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
m54284U_201016_223608/100730789/ccs	chr9	+	2639	18	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	66	junction_1	83.1088001619555	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125505	99182457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_99125544_99128275_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
m54284U_201016_223608/100730879/ccs	chr11	-	186	1	Intergenic	novelGene_5822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAGCATGTACCTCA	9030	False	NA	NA	False	NA	NA	NA	52274318	52274132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_52274100_52274300
m54284U_201016_223608/100731272/ccs	chr11	-	2061	15	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	307	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	223.647955866503	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTTTGTTTCTTAACC	NA	False	NA	NA	False	AATAAA	-30	NA	95873437	95853954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95871957_95873327
m54284U_201016_223608/100794906/ccs	chr13	+	1973	6	NIC	ENSMUSG00000015536.15	novel	1193	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	133	junction_2	18.6010752377383	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCCTGTCTCCTTTTTA	NA	False	NA	NA	False	AATAAA	-24	NA	114954793	114965265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114962818_114964824
m54284U_201016_223608/100796863/ccs	chr12	-	195	1	Intergenic	novelGene_6820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAACATGGCGTTGTTCCT	3851	False	NA	NA	False	NA	NA	NA	86893171	86892976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_86893000_86893200
m54284U_201016_223608/100862333/ccs	chr19	+	188	1	Intergenic	novelGene_9073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATCCCTTATCTACCA	NA	False	NA	NA	False	NA	NA	NA	3879019	3879207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3879000_3879200
m54284U_201016_223608/10094377/ccs	chr17	-	169	1	Intergenic	novelGene_8774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTGCAAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	87775905	87775736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_87775700_87775900
m54284U_201016_223608/100991083/ccs	chr11	-	2638	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_10	131.475054668177	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
m54284U_201016_223608/100992470/ccs	chr1	+	190	1	Intergenic	novelGene_478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCTACAGCCGGGCAGG	4178	False	NA	NA	False	NA	NA	NA	171292253	171292443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171292300_171292400
m54284U_201016_223608/101059125/ccs	chr7	-	1937	15	NNC	ENSMUSG00000074358.10	novel	2022	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	58.7855407044825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCTAGTGTGTGATTCAA	2760	False	NA	-1	True	AATAAA	-18	NA	18644340	18624807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057_18644183_18644267
m54284U_201016_223608/101124578/ccs	chrX	+	4619	6	ISM	ENSMUSG00000047045.18	ENSMUST00000112889.8	1742	7	12	5127	0	129	5prime_fragment	FALSE	canonical	3	60	junction_1	22.0599184042009	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCAGGAGTCCTGGCC	NA	False	NA	1	True	ATTAAA	-10	NA	141464413	141621363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
m54284U_201016_223608/101254038/ccs	chr7	+	802	6	NIC	ENSMUSG00000030649.19	novel	3103	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	189.568562794573	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	7817	False	NA	25	True	AATAAA	-25	NA	101545614	101548751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
m54284U_201016_223608/101318685/ccs	chr4	-	152	1	Intergenic	novelGene_2017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	116376620	116376468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116376500_116376600
m54284U_201016_223608/101515932/ccs	chr13	-	1120	8	NNC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	195.729300779606	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6441	False	NA	-22	True	AATAAA	-14	NA	55469759	55467697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_55467979_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
m54284U_201016_223608/101516451/ccs	chr2	-	152	1	Intergenic	novelGene_581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCTTAAAAGAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	5975561	5975409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_5975400_5975600
m54284U_201016_223608/101518119/ccs	chr9	-	1201	1	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	0	-24826	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAAACAC	NA	False	NA	NA	False	AATAAA	-42	NA	105372332	105371131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_105371100_105372300
m54284U_201016_223608/101581293/ccs	chr9	+	2263	6	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	227.97315631451	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198865	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59221035_59221135_59222013
m54284U_201016_223608/101582211/ccs	chr11	-	184	1	Intergenic	novelGene_5987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCTTGCAGAAACTCAA	NA	False	NA	NA	False	NA	NA	NA	74526360	74526176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_74526200_74526400
m54284U_201016_223608/10158658/ccs	chr4	-	1861	9	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_1	78.0940938867979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952980	147945247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
m54284U_201016_223608/10159347/ccs	chr7	+	1585	8	ISM	ENSMUSG00000051048.18	ENSMUST00000208565.2	1215	9	3919	-462	3919	0	3prime_fragment	FALSE	canonical	1	3	junction_5	4.23300925429402	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTCTAACAGCGACTAT	NA	False	NA	8	True	ATTAAA	-15	NA	99954706	99968906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_99954871_99955073_99955251_99959993_99960059_99962412_99962573_99963814_99963878_99966248_99966318_99967188_99967286_99968116
m54284U_201016_223608/10160218/ccs	chr6	+	4224	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	81.5406057887112	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185016	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_116185089_116185167_116185289_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201016_223608/101714549/ccs	chr18	+	4119	21	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	181.876579030946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663694_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
m54284U_201016_223608/101777998/ccs	chr2	+	182	1	Intergenic	novelGene_1029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAAGCAATTAATTAAAA	2481	False	NA	NA	False	NA	NA	NA	121407627	121407809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121407600_121407800
m54284U_201016_223608/101844944/ccs	chr16	-	1341	9	NNC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	129.348366823861	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTGTGCAGCATACATA	NA	False	NA	-9	True	AATAAA	-14	NA	20429518	20424222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427309_20427491_20427640_20427736_20427837_20429292
m54284U_201016_223608/102041908/ccs	chr9	-	688	4	NNC	ENSMUSG00000074476.7	novel	627	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	1006.10679795382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTTCATTGATTTATCT	NA	False	NA	-20	True	ATTAAA	-14	NA	21671599	21667397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_21667592_21668526_21668691_21668980_21669126_21671414
m54284U_201016_223608/102105225/ccs	chrX	+	4099	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	299.952273536975	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201016_223608/102105506/ccs	chr1	-	165	1	Intergenic	novelGene_192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTATATGTAAATT	NA	False	NA	NA	False	NA	NA	NA	74756768	74756603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_74756600_74756800
m54284U_201016_223608/102173049/ccs	chr4	+	205	1	Intergenic	novelGene_2148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTGTTTAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	129281441	129281646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129281400_129281600
m54284U_201016_223608/102238444/ccs	chr11	-	211	1	Intergenic	novelGene_6280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGGAGGCAGAGGCAGGC	8404	False	NA	NA	False	NA	NA	NA	97538809	97538598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97538600_97538800
m54284U_201016_223608/10225709/ccs	chr7	+	1440	7	NNC	ENSMUSG00000025439.6	novel	1504	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	56	junction_2	433.430790322976	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	97345901	97368086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_97346077_97354795_97354933_97360909_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
m54284U_201016_223608/102433179/ccs	chr6	-	168	1	Intergenic	novelGene_3264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTTTAAAAAAATTGA	NA	False	NA	NA	False	NA	NA	NA	49268340	49268172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_49268200_49268300
m54284U_201016_223608/102434655/ccs	chr6	-	185	1	Intergenic	novelGene_3113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTGAGGCTAATATAT	NA	False	NA	NA	False	NA	NA	NA	18967789	18967604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_18967600_18967800
m54284U_201016_223608/102435054/ccs	chr10	+	145	1	Intergenic	novelGene_5254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTTTTTTAAAGCC	5402	False	NA	NA	False	NA	NA	NA	34290310	34290455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_34290300_34290500
m54284U_201016_223608/102499386/ccs	chr4	-	2787	18	NIC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	663	junction_7	52.3575014537316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427473	120397064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
m54284U_201016_223608/102564971/ccs	chr5	+	3780	11	NNC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	6075	0	intron_retention	FALSE	canonical	1	4	junction_1	237.141729773568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774753	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_32774875_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
m54284U_201016_223608/102696442/ccs	chr16	+	3008	19	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17853	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	404.178041077059	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	7374	False	NA	11	True	AATAAA	-16	NA	48317847	48451263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_48318727_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
m54284U_201016_223608/102696833/ccs	chr15	+	4428	15	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_9	93.88912805723	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41652336	41724444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
m54284U_201016_223608/102697606/ccs	chr4	-	226	1	Intergenic	novelGene_2007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTTTCACTTATTCTTC	NA	False	NA	NA	False	NA	NA	NA	114821356	114821130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_114821100_114821400
m54284U_201016_223608/102761153/ccs	chr1	-	170	1	Intergenic	novelGene_244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACACAAAATCAGAAACTGT	NA	False	NA	NA	False	NA	NA	NA	89901583	89901413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_89901400_89901600
m54284U_201016_223608/102761704/ccs	chr13	+	2978	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2859	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	104.321426370617	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35922436	36058046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36055560_36055705_36056494
m54284U_201016_223608/102762345/ccs	chr4	+	3443	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_6	19.6592270219506	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931858	155943760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
m54284U_201016_223608/10290872/ccs	chr6	+	2284	4	NIC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	-246	-3766	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	272.154776225262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTAATGGTTAAGAATAC	NA	False	NA	14	True	AATAAA	-16	NA	54793654	54866719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_54794458_54840884_54840981_54855333_54855440_54865440
m54284U_201016_223608/10291600/ccs	chr10	-	4222	42	NNC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_6	49.9834594889811	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGACTTCCTGCCCTTCCTC	5935	False	NA	4	True	AATAAA	-39	NA	77002382	76888849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894662_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
m54284U_201016_223608/102957506/ccs	chr17	+	2196	14	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	102.716822196416	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980375	57018764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
m54284U_201016_223608/102958353/ccs	chr5	-	3490	8	NIC	ENSMUSG00000037373.13	novel	2279	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	693	junction_6	76.6209860952212	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432338	33405066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_33406031_33406450_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
m54284U_201016_223608/102958670/ccs	chr2	-	2076	8	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	414	junction_3	22.9889059313045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATTGTCTGTCTATTT	NA	False	NA	-16	True	NA	NA	NA	25255627	25251501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25251752_25252082_25252150_25252674_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
m54284U_201016_223608/103090499/ccs	chr15	-	828	1	FSM	ENSMUSG00000057262.3	ENSMUST00000081993.3	612	1	-142	-74	-142	74	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGGACCAGTTTCTCAAA	NA	False	NA	NA	False	AATAAA	-38	NA	52341766	52340938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_52340900_52341800
m54284U_201016_223608/103153811/ccs	chrX	-	4750	16	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	65	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_13	138.86188181867	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800253	149766136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786584_149787240_149787282_149797016_149797086_149800196
m54284U_201016_223608/103219957/ccs	chr12	+	3273	16	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_3	136.140842104377	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201016_223608/103350299/ccs	chr7	+	2058	15	NIC	ENSMUSG00000001829.18	novel	2287	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_2	201.550229218325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCCACCTTGCCCTCAT	NA	False	NA	18	True	AATAAA	-24	NA	101312963	101437017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101313421_101316454_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
m54284U_201016_223608/103351768/ccs	chr1	-	191	1	Intergenic	novelGene_302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGATTGAAATGACAG	NA	False	NA	NA	False	NA	NA	NA	131750122	131749931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_131749900_131750100
m54284U_201016_223608/103416596/ccs	chr17	-	181	1	Intergenic	novelGene_8634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47947207	47947026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_47947000_47947200
m54284U_201016_223608/103418138/ccs	chr11	+	3503	25	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_22	172.677761668954	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6800	False	NA	40	True	AATAAA	-25	NA	115714874	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
m54284U_201016_223608/103418450/ccs	chr2	+	3066	7	NIC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	137.491110823775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112148	127140852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_127112801_127126014_127126224_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
m54284U_201016_223608/103483787/ccs	chr7	-	902	4	ISM	ENSMUSG00000006313.6	ENSMUST00000006476.6	1421	8	5886	0	5886	0	3prime_fragment	FALSE	canonical	3	18	junction_3	10.6144555520604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGCAGAGGAGCTTGTT	7793	False	NA	-8	True	AATAAA	-10	NA	30306386	30302516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299
m54284U_201016_223608/10356302/ccs	chr16	+	7292	37	NIC	ENSMUSG00000022946.11	novel	7319	37	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	15.285831210715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATTGTCATGTGTATAG	NA	False	NA	20	True	AATAAA	-23	NA	93508821	93607476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
m54284U_201016_223608/103614498/ccs	chr3	+	4104	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	61.537420864598	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101639	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152101776_152125651_152125778_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
m54284U_201016_223608/103680413/ccs	chr13	-	2463	6	NNC	ENSMUSG00000021147.18	novel	3780	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	30.9283041888817	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATCTGTTACAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	8921080	8900515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_8902368_8903705_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
m54284U_201016_223608/103680818/ccs	chr2	+	2644	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	0	-905	intron_retention	FALSE	canonical	3	424	junction_6	48.6208224426531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGCTTTTTTAATTCT	NA	False	NA	NA	False	AGTAAA	-18	NA	112209570	112243680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
m54284U_201016_223608/103809440/ccs	chr6	+	2812	17	NIC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	0	-292	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	160.073371848662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCTGTGAAATAATTCT	NA	False	NA	14	True	AATAAA	-16	NA	52690747	52743473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
m54284U_201016_223608/103875932/ccs	chr5	-	2325	16	NNC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	0	659	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	90.9460401679052	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCTTAAATACTTTGCAA	NA	False	NA	2	True	AGTAAA	-30	NA	23988709	23946703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983474_23988509
m54284U_201016_223608/104006766/ccs	chr2	+	187	1	Intergenic	novelGene_1003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGACACAACTCAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	119224990	119225177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119225000_119225200
m54284U_201016_223608/104008107/ccs	chr5	+	191	1	Intergenic	novelGene_3012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGCACCATCACTGCCC	NA	False	NA	NA	False	NA	NA	NA	139764822	139765013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_139764800_139765000
m54284U_201016_223608/104008504/ccs	chr3	+	189	1	Intergenic	novelGene_1578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGAGGGTAGTGGGT	2062	False	NA	NA	False	NA	NA	NA	95984874	95985063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95984900_95985100
m54284U_201016_223608/104071634/ccs	chr7	+	3062	15	NIC	ENSMUSG00000030774.14	novel	3065	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	60.5657426576565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97492141	97561588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_97492349_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
m54284U_201016_223608/104072916/ccs	chr17	-	3165	7	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	415	1843	multi-exon	FALSE	canonical	3	36	junction_4	70.2558815252423	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37299522	37278243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr17_-_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299396
m54284U_201016_223608/104139318/ccs	chr11	+	4883	26	NNC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	0	-574	intron_retention	FALSE	canonical	2	12	junction_4	583.98516967471	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACTTAAAATTATTCCT	NA	False	NA	20	True	AATAAA	-26	NA	23206040	23247023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_23206718_23211834_23211967_23217661_23217764_23218622_23218691_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
m54284U_201016_223608/104139510/ccs	chrX	-	3864	19	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	20.1286755711078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47683268	47630502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_47632167_47632281_47632319_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
m54284U_201016_223608/104202564/ccs	chr10	-	786	8	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_3	1853.70330937388	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337802	95316667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95316840_95326107_95326275_95326396_95326444_95326648_95326725_95329492_95329578_95332685_95332750_95336244_95336385_95337767
m54284U_201016_223608/104204779/ccs	chr17	-	3277	20	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_19	78.490608503621	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5674	False	NA	-17	True	TATAAA	-18	NA	25946393	25938019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
m54284U_201016_223608/10421206/ccs	chr3	-	3782	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	-243	combination_of_known_junctions	FALSE	canonical	3	140	junction_2	238.390666216966	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3507	False	NA	-2	True	AATATA	-16	NA	89959822	89907842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201016_223608/104268382/ccs	chr6	-	1337	8	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	151	junction_2	16.318263212907	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAGCAGATGTTTACC	NA	False	NA	-18	True	AATAAA	-32	NA	113396301	113392289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
m54284U_201016_223608/104270372/ccs	chr3	-	188	1	Intergenic	novelGene_1402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCCACAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51347557	51347369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_51347400_51347600
m54284U_201016_223608/104334452/ccs	chr8	-	1321	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	109	junction_5	750.461950327189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746603_85750806_85750955_85751733
m54284U_201016_223608/104336116/ccs	chr9	-	3801	18	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-133	intron_retention	FALSE	canonical	3	162	junction_6	87.3841695021746	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469252	114415166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
m54284U_201016_223608/104401606/ccs	chr8	+	1464	4	NNC	ENSMUSG00000031548.8	novel	4372	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	596.495506176609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGTGAGTTGTGATTGAC	NA	False	NA	24	True	ACTAAA	-17	NA	23901517	23939648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_23902345_23907345_23907424_23936181_23936382_23939289
m54284U_201016_223608/104465840/ccs	chr19	-	2804	10	NIC	ENSMUSG00000025223.16	novel	2108	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	657	junction_1	53.8023359904074	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	6718	False	NA	-30	True	ATTAAA	-21	NA	46033653	46021031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46033268
m54284U_201016_223608/104596629/ccs	chr11	+	4202	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	intron_retention	FALSE	canonical	3	2354	junction_12	205.106408697751	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332202	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
m54284U_201016_223608/104729391/ccs	chr5	-	2464	5	NIC	ENSMUSG00000036285.11	novel	2815	3	NA	NA	-339	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	64.2222702806433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCTA	NA	False	NA	NA	False	NA	NA	NA	77458270	77451225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_77451673_77452032_77452165_77454120_77454324_77455399_77455565_77456753
m54284U_201016_223608/104792357/ccs	chr15	-	1559	9	NIC	ENSMUSG00000022433.22	novel	3174	9	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	217.31684098339	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACGTGTACCTCTCTTT	8083	False	NA	-1	True	ATTAAA	-18	NA	79326273	79307843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
m54284U_201016_223608/104793207/ccs	chr15	+	2964	17	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	1727	junction_9	139.566964214315	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	19	True	AAAAAG	-16	NA	81756684	81799334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
m54284U_201016_223608/104793970/ccs	chr2	-	4051	3	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_2	138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26277684_26279160
m54284U_201016_223608/104794662/ccs	chr7	-	3985	6	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	98.7813747626545	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155164	42122809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42155033
m54284U_201016_223608/104857769/ccs	chr11	+	3964	11	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	107.560401635546	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9727	False	NA	12	True	AATAAA	-18	NA	44409790	44456347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_44410496_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
m54284U_201016_223608/104859273/ccs	chr5	+	5449	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	36.5368450911651	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2013	False	NA	7	True	AATAAA	-8	NA	33021064	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021088_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
m54284U_201016_223608/10486195/ccs	chr16	+	3714	11	NIC	ENSMUSG00000022545.14	novel	3480	11	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	14.2270868416553	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGGTTTCTCAGTGTTT	NA	False	NA	11	True	AATAAA	-14	NA	12927601	12966598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948887_12950721_12950815_12962264_12962378_12965389
m54284U_201016_223608/104923818/ccs	chr15	-	1982	20	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	23.4946802489415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080699	89069014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071202_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
m54284U_201016_223608/1049292/ccs	chr7	-	4679	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_10	38.4508107034169	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943332_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
m54284U_201016_223608/105055050/ccs	chr7	-	2922	6	ISM	ENSMUSG00000008435.16	ENSMUST00000119485.8	2119	7	-41	897	0	0	5prime_fragment	FALSE	canonical	2	7	junction_3	10.0279609093773	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCATTGTCCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	4448641	4428665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_4430802_4433392_4433495_4434420_4434634_4445592_4445749_4447201_4447321_4448445
m54284U_201016_223608/105056870/ccs	chr4	-	1488	11	Fusion	ENSMUSG00000028975.17_ENSMUSG00000086606.2	novel	2006	9	NA	NA	0	0	multi-exon	FALSE	canonical	3	45	junction_1	151.923796687682	38	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGCTCGTTGTGGACAA	NA	False	NA	-4	True	AATAAA	-14	NA	149184273	149031948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_-_149032363_149033223_149033365_149046004_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
m54284U_201016_223608/105120145/ccs	chr4	-	2839	15	NIC	ENSMUSG00000028453.11	novel	2974	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	28.3574127371109	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	12	True	NA	-6	True	ATTAAA	-16	NA	43010506	43002342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001_43010173_43010255
m54284U_201016_223608/105120838/ccs	chr7	+	3449	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.88532574747	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7198	False	NA	21	True	ATTAAA	-16	NA	109617480	109655322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109617716_109626277_109626356_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
m54284U_201016_223608/105121024/ccs	chr2	-	4313	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	17.917868176767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACCGTTTAAGAAAACAT	NA	False	NA	1	True	AATAAA	-18	NA	38177402	37689002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38133413_38133485_38177124
m54284U_201016_223608/105121358/ccs	chr11	-	193	1	Intergenic	novelGene_6101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTCACTAGTTCATTC	8547	False	NA	NA	False	NA	NA	NA	79965915	79965722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79965700_79965900
m54284U_201016_223608/105186466/ccs	chr9	-	3977	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	238.185044777281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526585	108480145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108482353_108482532_108482672_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
m54284U_201016_223608/105317591/ccs	chr10	+	3094	7	ISM	ENSMUSG00000025355.8	ENSMUST00000026411.8	3402	9	3603	0	3602	0	3prime_fragment	FALSE	canonical	1	1	junction_5	1.89296944860009	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTCCTTGTTTCAGAGT	NA	False	NA	NA	False	AATAAA	-15	NA	128630432	128636693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
m54284U_201016_223608/105383521/ccs	chr9	+	2373	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	256	junction_6	38.6426505026483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGCTCTGGCTGTATA	NA	False	NA	13	True	AATAAA	-14	NA	107828165	107848724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
m54284U_201016_223608/105447864/ccs	chr4	+	2230	9	NIC	ENSMUSG00000028410.14	novel	5622	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	944.437919809979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTGTCACTGCAGGC	-27	True	NA	5	True	AATATA	-17	NA	40722929	40733900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_40723002_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
m54284U_201016_223608/105448097/ccs	chr17	+	3791	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	276	junction_13	138.874711880889	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8820	False	NA	32	True	AATAAA	-33	NA	35354485	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201016_223608/105449121/ccs	chr1	+	2948	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	346	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	90.9490428485189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059759	159173016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_159060421_159067131_159067192_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
m54284U_201016_223608/105449238/ccs	chr9	+	1193	8	NIC	ENSMUSG00000031939.17	novel	1148	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	233.748163803767	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAATAAACTAATGAT	9118	False	NA	-22	True	ATTAAA	-19	NA	15217555	15223373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
m54284U_201016_223608/10554109/ccs	chr6	+	882	1	FSM	ENSMUSG00000101878.2	ENSMUST00000173192.2	387	1	-104	-391	-104	391	mono-exon	FALSE	NA	NA	NA	NA	NA	888	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACCAAAACACCAAATGCA	NA	False	NA	NA	False	AATAAA	-32	NA	116150593	116151475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_116150600_116151500
m54284U_201016_223608/105644888/ccs	chr8	-	3256	22	NNC	ENSMUSG00000037300.20	novel	3148	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	131.824679145242	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGGTCAGTTTGGTCGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	125448722	125398070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125419332_125419438_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
m54284U_201016_223608/105710659/ccs	chr17	-	2838	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.9463334554289	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580381	22556969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577970_22578420_22578506_22580148
m54284U_201016_223608/105776794/ccs	chr7	+	4304	13	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	0	427	combination_of_known_junctions	FALSE	canonical	2	61	junction_2	108.378452142891	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113113068	113170092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_113113145_113125194_113125246_113138483_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
m54284U_201016_223608/105777894/ccs	chr2	-	178	1	Intergenic	novelGene_910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATTATAGTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	87649962	87649784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_87649800_87650000
m54284U_201016_223608/105974003/ccs	chr14	-	173	1	Intergenic	novelGene_7523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAATAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	67603818	67603645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_67603600_67603800
m54284U_201016_223608/105974194/ccs	chr15	-	837	1	FSM	ENSMUSG00000082585.4	ENSMUST00000120421.2	648	1	-95	-94	-95	94	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTAAGATTTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	73966277	73965440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73965400_73966300
m54284U_201016_223608/105974424/ccs	chr3	+	2665	14	NNC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	277.623025663755	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754197_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201016_223608/106038005/ccs	chr7	-	2010	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	58	0	intron_retention	FALSE	canonical	3	64	junction_10	96.9278597721006	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937218	24927682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_24928356_24928889_24928998_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936994
m54284U_201016_223608/106038053/ccs	chr11	-	202	1	Intergenic	novelGene_6391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCAGTACACTGAACAT	4954	False	NA	NA	False	NA	NA	NA	106525155	106524953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106525000_106525200
m54284U_201016_223608/106038223/ccs	chr17	-	4259	16	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	584	junction_13	78.4682242836055	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
m54284U_201016_223608/106104375/ccs	chr14	+	4139	14	NNC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	128.124431013313	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438690	59474714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_59439034_59443073_59443197_59444252_59444380_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
m54284U_201016_223608/106105452/ccs	chr18	+	3012	15	NIC	ENSMUSG00000025429.10	novel	1056	14	NA	NA	0	878	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	7.97860659923186	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTATTCTTGTGT	2210	False	NA	NA	False	AATAAA	-20	NA	77877613	77971457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_77877687_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
m54284U_201016_223608/10618201/ccs	chr17	-	762	6	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10121	-15007	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_1	242.285286387762	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	2347	False	NA	NA	False	AATAAA	-15	NA	6744542	6723807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_6724073_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
m54284U_201016_223608/10619442/ccs	chrX	+	3615	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	87	-449	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	683.112113785139	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAAGTATGTCTA	NA	False	NA	72	True	AATAAA	-41	NA	20524746	20548969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20524968_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
m54284U_201016_223608/106300137/ccs	chr18	+	4152	22	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	220.780433915689	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
m54284U_201016_223608/106300492/ccs	chr12	+	3340	2	NNC	ENSMUSG00000033454.7	novel	12190	2	NA	NA	843	-8521	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAAGAAATCAAT	263	False	NA	NA	False	GATAAA	-4	NA	76417882	76435203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_76418019_76431999
m54284U_201016_223608/106367257/ccs	chr5	-	197	1	Intergenic	novelGene_3015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATAAGACTGTGAGTGC	NA	False	NA	NA	False	NA	NA	NA	140106039	140105842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_140105800_140106000
m54284U_201016_223608/106431034/ccs	chr4	+	777	7	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2498	5	NA	NA	0	-2017	multi-exon	TRUE	canonical	2	3	junction_5	74.9525776000325	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAAACAGTTTAACTTT	NA	False	NA	NA	False	AATACA	-6	NA	145311772	145554495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_+_145311905_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
m54284U_201016_223608/106432745/ccs	chr11	-	1987	11	NIC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	144.198509007548	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193112	101179087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101192553_101192683_101192957
m54284U_201016_223608/106496010/ccs	chr4	+	1757	4	NNC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	134.650164005346	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	14	True	NA	14	True	NA	NA	NA	48540410	48561918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_48540569_48549924_48549998_48552379_48552831_48560843
m54284U_201016_223608/106561777/ccs	chr6	-	1866	5	NIC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	197.444137669367	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAGTGTGCCCATAGT	NA	False	NA	-17	True	AATAAA	-12	NA	88423509	88234854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_88235374_88258530_88258688_88274558_88275219_88353185_88353394_88423187
m54284U_201016_223608/106629934/ccs	chr16	+	3031	16	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	118.145371847097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2230	False	NA	22	True	AATAAA	-22	NA	21828261	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
m54284U_201016_223608/106694148/ccs	chr7	-	4015	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_5	88.2813683627525	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTACTTACTGCTGTCTT	NA	False	NA	-15	True	AATAAA	-15	NA	42155164	42122809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42155033
m54284U_201016_223608/106758630/ccs	chr5	+	4109	4	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	644	0	intron_retention	FALSE	canonical	1	1	junction_1	257.045175450196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	5612	False	NA	19	True	AATAAA	-30	NA	105849375	105963076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_105849441_105862914_105863327_105880095_105880241_105959589
m54284U_201016_223608/106823781/ccs	chr1	-	3516	17	NIC	ENSMUSG00000026608.14	novel	3706	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	48.7384601726398	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGTGTCTTCAGTTATT	NA	False	NA	-2	True	ATTAAA	-20	NA	188740038	188703291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
m54284U_201016_223608/10682789/ccs	chr11	-	3284	27	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	377.093713338015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8466	False	NA	-9	True	TATAAA	-18	NA	102771793	102729302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
m54284U_201016_223608/10684860/ccs	chr11	-	3012	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	0	85	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	63.363712012476	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174158	52143112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
m54284U_201016_223608/106890172/ccs	chr2	+	1613	4	NNC	ENSMUSG00000026854.17	novel	622	2	NA	NA	-544	-938	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	12.5521135891752	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACTGTGACACTGT	7656	False	NA	23	True	AATAAA	-23	NA	30909286	30912656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_30909404_30909796_30909900_30910840_30910913_30911335
m54284U_201016_223608/106890253/ccs	chr7	-	3610	13	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	43.6898793264018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732169	121706487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723616_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
m54284U_201016_223608/106890390/ccs	chrX	-	2138	13	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68054	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	30.7679486912382	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGACCATTTTATTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	17117553	16998287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17117502
m54284U_201016_223608/106890719/ccs	chr3	-	7026	17	NIC	ENSMUSG00000032913.14	novel	7099	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	19.5220228203944	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTGGTCTTCTCTTGC	NA	False	NA	-21	True	AATAAA	-15	NA	104419234	104361296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_104365281_104368716_104369005_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
m54284U_201016_223608/106955508/ccs	chr11	-	5164	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	-280	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_18	50.3843560376962	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGTTTCGAAGTCTC	2066	False	NA	NA	False	ATTAAA	-16	NA	104441446	104393850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
m54284U_201016_223608/106956676/ccs	chr1	+	3342	10	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_5	16.0100277218474	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	76	False	NA	19	True	AATAAA	-15	NA	75168835	75176031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
m54284U_201016_223608/106956869/ccs	chr12	+	3452	8	ISM	ENSMUSG00000037466.14	ENSMUST00000196755.5	4000	9	-19	600	0	-600	intron_retention	FALSE	canonical	3	15	junction_3	72.3201499005129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120040	113129068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121090_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
m54284U_201016_223608/106957508/ccs	chr1	+	1081	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	47.0130005660373	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGTGCTGTTTCTT	2052	False	NA	12	True	AGTAAA	-18	NA	75145309	75148269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147980
m54284U_201016_223608/107020658/ccs	chr12	+	2843	4	Intergenic	novelGene_6582	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_3	34.2150064542836	62	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCTTTGTATTTTGTTG	NA	False	NA	6	True	AATAAA	-11	NA	19116402	19127634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_19116514_19123371_19123499_19123700_19123762_19125090
m54284U_201016_223608/107153053/ccs	chr10	+	1667	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_8	458.422822703015	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4886	False	NA	29	True	ATTAAA	-17	NA	80634565	80640758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639817
m54284U_201016_223608/107153504/ccs	chr10	+	3062	14	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	28.3183508362129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977715	118004902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986726_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
m54284U_201016_223608/107153910/ccs	chr1	-	184	1	Intergenic	novelGene_161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCCAAACAGTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	63219902	63219718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_63219700_63219900
m54284U_201016_223608/107217655/ccs	chr11	-	5130	18	NNC	ENSMUSG00000020802.9	novel	5205	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_10	40.7732356749479	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGGGGGAGTTGGC	7465	False	NA	1	True	ATTAAA	-19	NA	116472273	116428565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435946_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
m54284U_201016_223608/107219124/ccs	chr7	+	2202	9	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	224.395716313837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745949_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
m54284U_201016_223608/107282873/ccs	chr14	+	3712	3	NIC	ENSMUSG00000022125.8	novel	2445	4	NA	NA	120	0	intron_retention	FALSE	canonical	3	258	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTGCATCTTGTATCTT	NA	False	NA	6	True	NA	NA	NA	103307771	103315064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_103307904_103309069_103310849_103313263
m54284U_201016_223608/107284393/ccs	chr9	-	1046	5	ISM	ENSMUSG00000032207.11	ENSMUST00000034731.10	1920	9	118050	44	117855	0	3prime_fragment	FALSE	canonical	3	43	junction_2	8.95823643358446	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGGGTGTGCTTTGCT	NA	False	NA	NA	False	AATAAA	-11	NA	70724040	70705453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811
m54284U_201016_223608/107284456/ccs	chr13	+	4474	1	Genic_Genomic	ENSMUSG00000113566.2	novel	NA	NA	NA	NA	-1895	971	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTGCATATTTGTGT	NA	False	NA	NA	False	ATTAAA	-38	NA	62256358	62260832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_+_62256400_62260800
m54284U_201016_223608/107348677/ccs	chr3	+	2771	14	NIC	ENSMUSG00000028060.15	novel	2567	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	117.891435365528	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-10	True	NA	13	True	AATAAA	-14	NA	88593120	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
m54284U_201016_223608/107349793/ccs	chr19	+	2204	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	204.389596464343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
m54284U_201016_223608/107350543/ccs	chr9	-	195	1	Intergenic	novelGene_4726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTTTACACACCCAGCC	NA	False	NA	NA	False	NA	NA	NA	43389108	43388913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_43388900_43389100
m54284U_201016_223608/10749567/ccs	chr12	-	2746	4	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	0	382	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	12.2836838484589	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTGGTTTTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-27	NA	73160199	73149832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_73151013_73155434_73156124_73159116_73159932_73160137
m54284U_201016_223608/107743310/ccs	chr18	+	835	1	NIC	ENSMUSG00000025428.16	novel	2471	12	NA	NA	0	-6273	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCTTTGAATCCTTTA	NA	False	NA	NA	False	NA	NA	NA	77861691	77862526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_77861700_77862500
m54284U_201016_223608/107808644/ccs	chr5	+	2514	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	0	-1534	combination_of_known_splicesites	FALSE	canonical	3	4	junction_13	58.0289664456085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	20	True	AATAAA	-25	NA	143803585	143839535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143838602
m54284U_201016_223608/107939242/ccs	chr9	+	1503	1	Intergenic	novelGene_4686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTCTGTG	NA	False	NA	NA	False	NA	NA	NA	30558683	30560186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_30558700_30560200
m54284U_201016_223608/108004643/ccs	chr8	-	7693	49	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	296.058006674321	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
m54284U_201016_223608/108070003/ccs	chr6	-	188	1	Intergenic	novelGene_3427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTAAACACTCGCTG	NA	False	NA	NA	False	NA	NA	NA	114899402	114899214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_114899200_114899400
m54284U_201016_223608/108071087/ccs	chr4	+	203	1	Intergenic	novelGene_1985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGAGAGAACAAGCCCA	6557	False	NA	NA	False	NA	NA	NA	107975180	107975383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_107975200_107975400
m54284U_201016_223608/108071121/ccs	chr9	+	6410	37	NNC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	49.1547929793169	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAGACCTTAACTATG	NA	False	NA	15	True	AATAAA	-16	NA	113570540	113748750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113570944_113590657_113590737_113594991_113595117_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
m54284U_201016_223608/108071332/ccs	chr4	+	581	3	Intergenic	novelGene_1855	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	16	True	NA	NA	NA	48513813	48519021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_48514080_48514498_48514586_48518793
m54284U_201016_223608/108134812/ccs	chr1	-	5574	23	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	0	-729	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	37.7887779047853	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	418	False	NA	-2	True	AATAAA	-23	NA	161704251	161644411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
m54284U_201016_223608/108136584/ccs	chr11	+	4593	13	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	0	-313	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	132.897490779757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737579	49776925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_49737803_49745039_49745210_49745563_49745805_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
m54284U_201016_223608/10814748/ccs	chr15	-	644	2	Intergenic	novelGene_7724	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAATTTATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	57839453	57837903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_57838339_57839244
m54284U_201016_223608/108200357/ccs	chrX	+	4688	11	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	147	junction_5	150.763689262368	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158375066
m54284U_201016_223608/108202267/ccs	chr14	-	167	1	Intergenic	novelGene_7449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTTACAAAAACAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	52555169	52555002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_52555000_52555200
m54284U_201016_223608/108202733/ccs	chr15	-	1251	3	Antisense	novelGene_ENSMUSG00000115093.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTGTTGTATTATCT	NA	False	NA	NA	False	NA	NA	NA	6074116	6054170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_6055131_6073729_6073988_6074083
m54284U_201016_223608/108267150/ccs	chr4	+	1052	8	NIC	ENSMUSG00000028519.17	novel	5278	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	7.28991475552747	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGACTGTTGTAACTTT	NA	False	NA	8	True	AATAAA	-15	NA	104224786	104537579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_104224915_104336270_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104537387
m54284U_201016_223608/108331309/ccs	chr13	-	682	4	Fusion	ENSMUSG00000074830.5_ENSMUSG00000114353.2	novel	894	4	NA	NA	0	-1906	multi-exon	FALSE	canonical	3	13	junction_2	24.0739601136904	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCTGTATAGTCTCATAA	NA	False	NA	NA	False	NA	NA	NA	66950624	66820740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr13_-_66821069_66942962_66943090_66946612_66946744_66950528
m54284U_201016_223608/108397388/ccs	chr12	+	2054	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	138.267799487082	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512069_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201016_223608/108397739/ccs	chr4	-	2733	13	NIC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	156.936005181164	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	4	True	NA	-4	True	AATAAA	-17	NA	9669086	9575266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
m54284U_201016_223608/108528218/ccs	chr5	-	196	1	Intergenic	novelGene_2579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGACCTCAATATATATA	NA	False	NA	NA	False	NA	NA	NA	55595210	55595014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_55595000_55595200
m54284U_201016_223608/108528866/ccs	chr9	-	2856	9	NNC	ENSMUSG00000050627.14	novel	4391	8	NA	NA	0	-434	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	29.0376910239089	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGAGCCTATTTTTCC	NA	False	NA	-7	True	AATAAA	-20	NA	114762947	114728842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_114730448_114731440_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
m54284U_201016_223608/108528915/ccs	chrX	+	2076	5	NNC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	59.8351903147303	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	-2	True	AATAAA	-13	NA	162692140	162712542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162711021
m54284U_201016_223608/108529268/ccs	chr3	+	3854	10	NNC	ENSMUSG00000036580.16	novel	3770	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	79.9825598273974	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	False	NA	21	True	AATAAA	-22	NA	55019533	55044743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_55019639_55022902_55022992_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
m54284U_201016_223608/108593568/ccs	chr14	+	2768	1	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	14300	188	7712	-188	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATTCAAGATTGCTTA	NA	False	NA	12	True	AATAAA	-16	NA	52530902	52533670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_52530900_52533700
m54284U_201016_223608/108595417/ccs	chr8	+	3501	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	47.3133760743783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645179	18853205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
m54284U_201016_223608/108595678/ccs	chr12	+	3108	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	5416	junction_8	465.180996360556	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTTGGGTAAAATGTAC	NA	False	NA	72	True	ATTAAA	-26	NA	24758239	24764145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
m54284U_201016_223608/108790980/ccs	chr1	-	3078	21	ISM	ENSMUSG00000026458.14	ENSMUST00000186730.7	4674	22	294	1597	294	0	3prime_fragment	FALSE	canonical	2	30	junction_19	10.0641691162261	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCTGCTTGGACTA	NA	False	NA	-6	True	AATAAA	-13	NA	134254710	134226118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
m54284U_201016_223608/10881030/ccs	chr19	-	5270	22	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	0	2712	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	18.3974759187614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9860	False	NA	-2	True	AATAAA	-22	NA	40502223	40280484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
m54284U_201016_223608/108856304/ccs	chr7	+	1954	9	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	209.072318528781	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474729_138474781_138475848_138476014_138478184_138478447_138483937
m54284U_201016_223608/108923194/ccs	chr4	-	4336	25	NIC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-316	1097	combination_of_known_splicesites	TRUE	canonical	3	20	junction_2	61.2422188935052	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTCTTGGATTATTCC	-1	True	NA	NA	False	NA	NA	NA	57143753	56994580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019959_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
m54284U_201016_223608/108986818/ccs	chr1	-	192	1	Intergenic	novelGene_325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAATATCTAATAAA	NA	False	NA	NA	False	NA	NA	NA	133739450	133739258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_133739300_133739400
m54284U_201016_223608/108987713/ccs	chr7	+	2160	5	NIC	ENSMUSG00000042178.7	novel	3834	6	NA	NA	1177	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	39.1942278913618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGGGGTCGTCTG	NA	False	NA	10	True	ATTAAA	-21	NA	127837705	127844272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127837762_127839053_127839162_127839254_127840042_127842511_127842645_127843196
m54284U_201016_223608/108988576/ccs	chr9	+	3850	15	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	228	junction_1	21.0504738421631	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4420	False	NA	18	True	AATAAA	-45	NA	77661816	77701767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
m54284U_201016_223608/109054812/ccs	chr3	+	1516	6	NIC	ENSMUSG00000028140.14	novel	1612	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	87.5337649138891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGAACTTC	8502	False	NA	NA	False	NA	NA	NA	94350643	94356015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94355092
m54284U_201016_223608/109118124/ccs	chr18	-	2202	1	Intergenic	novelGene_8884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATATGACACTAGAAAAGC	3522	False	NA	NA	False	NA	NA	NA	35255461	35253259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35253300_35255500
m54284U_201016_223608/109249061/ccs	chr17	+	183	1	Intergenic	novelGene_8392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTACAAAATTCAGACAC	NA	False	NA	NA	False	NA	NA	NA	21747044	21747227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_21747000_21747200
m54284U_201016_223608/109379653/ccs	chr5	-	6637	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-8399	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	137.114228012404	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGAAACGTGAATATTC	NA	False	NA	NA	False	AATAAA	-27	NA	65864015	65765112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65863839
m54284U_201016_223608/109381598/ccs	chr2	+	2911	20	NNC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	34.216031945643	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126683	32145017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_32126829_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
m54284U_201016_223608/109381982/ccs	chr1	+	2324	7	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	282.033094984732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878114	4916962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_4878206_4878677_4878710_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
m54284U_201016_223608/10944602/ccs	chr17	-	3399	22	NIC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_15	46.8986943138577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	8347	False	NA	-9	True	AGTAAA	-14	NA	29457141	29376889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29421478_29421543_29421828_29421880_29423662_29423723_29428397_29428475_29428663_29428704_29430621_29430726_29444164_29444212_29445166_29445208_29456586
m54284U_201016_223608/109446457/ccs	chr13	-	2553	8	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	2476	junction_5	487.475964870608	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100922994	100915239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
m54284U_201016_223608/109446568/ccs	chr16	+	1494	8	NNC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	0	-99	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	209.430422911325	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATATACGTGTATATTT	5404	False	NA	8	True	AATATA	-14	NA	35590744	35645819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_35590800_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
m54284U_201016_223608/109448012/ccs	chr8	-	182	1	Intergenic	novelGene_4473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTCTGGGAGCCAAGC	NA	False	NA	NA	False	NA	NA	NA	107898078	107897896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107897900_107898100
m54284U_201016_223608/10945747/ccs	chr9	+	2145	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	236.300915040504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904139	86959434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
m54284U_201016_223608/10945881/ccs	chr9	-	2617	17	NIC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_14	444.014846141151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678929	36643721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36674632_36674694_36676349_36676477_36678845
m54284U_201016_223608/109774995/ccs	chr11	+	4308	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	112	-1200	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	101.895643268995	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2028	False	NA	26	True	AATAAA	-16	NA	87018014	87110309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040178_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
m54284U_201016_223608/109839423/ccs	chr11	-	193	1	Intergenic	novelGene_5833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACAGGTTGCACACTTCC	7981	False	NA	NA	False	NA	NA	NA	53247653	53247460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_53247500_53247700
m54284U_201016_223608/109905194/ccs	chrX	+	3626	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	0	-449	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_25	683.715009634862	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAAGTATGTCTA	NA	False	NA	72	True	AATAAA	-41	NA	20529136	20548969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548453_20548616
m54284U_201016_223608/109906584/ccs	chrX	-	180	1	Intergenic	novelGene_9648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGCTATGTGCCAT	NA	False	NA	NA	False	NA	NA	NA	139657826	139657646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_139657600_139657800
m54284U_201016_223608/109906598/ccs	chr19	+	3574	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	85.9051220824463	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502629	10525017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509624_10509699_10510183_10510288_10510656_10510830_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
m54284U_201016_223608/109970715/ccs	chr7	+	3296	9	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	682.108495768818	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515292	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
m54284U_201016_223608/110035276/ccs	chr1	+	1317	8	NNC	ENSMUSG00000026470.15	novel	4589	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	70.5112525395336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGAGATTGGTCTGCTG	NA	False	NA	NA	False	TATAAA	-19	NA	155034460	155081405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155080957
m54284U_201016_223608/110035787/ccs	chr8	+	195	1	Intergenic	novelGene_4408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACAGCCTTTTGACTCC	NA	False	NA	NA	False	NA	NA	NA	94733224	94733419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_94733200_94733400
m54284U_201016_223608/110037515/ccs	chr7	+	2459	16	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	155.061650821715	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428093	49508013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_49428250_49428328_49428462_49430056_49430092_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
m54284U_201016_223608/11011710/ccs	chr8	+	2257	2	ISM	ENSMUSG00000110013.2	ENSMUST00000210977.2	763	4	0	42639	0	-42639	5prime_fragment	FALSE	canonical	3	54	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTTTCTCGTGAGTGAT	NA	False	NA	23	True	NA	NA	NA	52809645	52813735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_52809842_52811674
m54284U_201016_223608/110231969/ccs	chr7	+	2392	5	NIC	ENSMUSG00000046027.18	novel	2483	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	73.39618518697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGAGTTCCTCATTTA	NA	False	NA	NA	False	ATTAAA	-23	NA	83281207	83291536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_83281348_83282337_83282471_83285958_83286077_83286811_83286906_83289629
m54284U_201016_223608/110232011/ccs	chr19	-	951	8	NIC	ENSMUSG00000034108.7	novel	1067	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	206.828727330078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTCTCTGTGTTCTT	NA	False	NA	-7	True	ATTAAA	-20	NA	4889315	4875393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883476_4884200_4884339_4888858_4888932_4889224
m54284U_201016_223608/110233294/ccs	chr8	-	1983	8	ISM	ENSMUSG00000031816.16	ENSMUST00000116415.9	1520	9	-65	384	0	0	5prime_fragment	FALSE	canonical	2	11	junction_5	27.5473618130147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGCAGGACTCAGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	121835131	121824675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832456_121832571_121833608_121833713_121835026
m54284U_201016_223608/110233398/ccs	chr1	+	2717	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	0	-802	combination_of_known_splicesites	FALSE	canonical	1	11	junction_10	539.934116351245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTTATAGATCAGTCT	891	False	NA	21	True	AATAAA	-16	NA	58432290	58445710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58444193
m54284U_201016_223608/110233889/ccs	chr7	+	221	1	Intergenic	novelGene_3697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACCTAATACCAG	NA	False	NA	NA	False	AAAAAG	-20	NA	23996552	23996773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_23996600_23996800
m54284U_201016_223608/110297267/ccs	chr4	+	1422	10	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-237	0	intron_retention	FALSE	canonical	2	236	junction_5	29.8009859808715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	0	True	NA	32	True	AATAAA	-33	NA	41755520	41758695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
m54284U_201016_223608/110297479/ccs	chr16	-	3449	16	NNC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	1184	0	intron_retention	TRUE	canonical	2	15	junction_15	117.179330752294	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20194208	20150052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20194136
m54284U_201016_223608/110363149/ccs	chr5	+	2409	13	NIC	ENSMUSG00000029141.17	novel	2499	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	26.846270173382	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	False	NA	11	True	AGTAAA	-21	NA	31684355	31711386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31705957_31706026_31708056_31708127_31711082
m54284U_201016_223608/110430047/ccs	chr8	-	2654	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	0	1989	intron_retention	FALSE	canonical	3	287	junction_2	21.48373851098	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGACCGGTGCCTGT	NA	False	NA	-14	True	AATAAA	-21	NA	122305529	122278748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_122279185_122280843_122281191_122281944_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
m54284U_201016_223608/110431063/ccs	chr2	-	1714	6	ISM	ENSMUSG00000027420.14	ENSMUST00000028907.14	2372	8	14149	0	13919	0	3prime_fragment	FALSE	canonical	0	0	junction_2	2.92574776766556	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCTCGTGTAATTAATA	NA	False	NA	-2	True	ATTAAA	-25	NA	143690944	143668447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_143669560_143672003_143672090_143673756_143673978_143683593_143683702_143687820_143687911_143690847
m54284U_201016_223608/110493831/ccs	chr16	-	2566	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	0	0	multi-exon	FALSE	canonical	3	59	junction_6	387.8436913099	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTGGATCGCCT	6230	False	NA	-16	True	AGTAAA	-22	NA	38370620	38318708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
m54284U_201016_223608/110494111/ccs	chr5	+	2838	7	ISM	ENSMUSG00000049327.18	ENSMUST00000147969.8	2112	8	279	-765	0	0	3prime_fragment	FALSE	canonical	3	338	junction_1	172.952787392012	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	4687	False	NA	29	True	AATAAA	-38	NA	124583846	124600371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
m54284U_201016_223608/110494618/ccs	chr11	-	2857	19	NNC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	0	1308	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_7	459.509400218199	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191284	53152398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159410_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
m54284U_201016_223608/110494732/ccs	chr4	+	910	1	FSM	ENSMUSG00000062554.8	ENSMUST00000122336.2	381	1	-66	-463	-66	463	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAATTGTGGGGAGCGG	NA	False	NA	NA	False	NA	NA	NA	34353976	34354886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_34354000_34354900
m54284U_201016_223608/110494940/ccs	chr7	-	3482	16	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_12	106.612486239756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9322	False	NA	-8	True	AATAAA	-20	NA	44804008	44791258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44796946_44797148_44797227_44797307_44797487_44798037_44799191_44803815
m54284U_201016_223608/110626595/ccs	chr16	+	1923	9	NNC	ENSMUSG00000002845.15	novel	2871	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	251.54817505798	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGGTTGCCCCTTCA	NA	False	NA	-15	True	NA	NA	NA	38383222	38411708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_38383410_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
m54284U_201016_223608/110691074/ccs	chrX	+	5936	34	NIC	ENSMUSG00000025862.15	novel	5825	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_30	34.473955780863	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTATCTCTTGTAATC	NA	False	NA	19	True	AATAAA	-22	NA	41239577	41366062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
m54284U_201016_223608/11075603/ccs	chr14	+	2763	11	NIC	ENSMUSG00000034327.18	novel	3157	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	37.6256561404582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTTCTGCTCTTGCT	NA	False	NA	10	True	AATAAA	-22	NA	67953588	67979610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
m54284U_201016_223608/110756850/ccs	chr16	-	6735	14	NIC	ENSMUSG00000062203.16	novel	3716	15	NA	NA	0	3052	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	423.908036805908	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCCTCTTTTTTA	NA	False	NA	-3	True	AATAAA	-16	NA	11072134	11034103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11071506
m54284U_201016_223608/11076436/ccs	chr8	+	2080	12	NIC	ENSMUSG00000025316.17	novel	2289	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	73.218342099741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677313	122752916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
m54284U_201016_223608/110823745/ccs	chr1	+	4165	22	NNC	ENSMUSG00000026288.15	novel	577	3	NA	NA	181	0	intron_retention	FALSE	canonical	3	20	junction_1	111.669357262742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9551	False	NA	19	True	AATAAA	-20	NA	87604141	87648229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
m54284U_201016_223608/110887347/ccs	chr14	-	3625	11	NNC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	27.4082104486958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032450	33958989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_33959544_33960637_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33995443_33995534_34030996_34031052_34032123
m54284U_201016_223608/110888099/ccs	chr5	-	3363	4	NNC	ENSMUSG00000028933.12	novel	3247	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	31.8852107828483	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATATTTCATATTTTC	NA	False	NA	-12	True	AATACA	-11	NA	25910823	25894809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_25897827_25903248_25903331_25908295_25908412_25910675
m54284U_201016_223608/110888685/ccs	chr1	+	2614	19	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_2	89.1384690617169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAACAAAAAGTTTAT	NA	False	NA	NA	False	AATAAA	-11	NA	159059759	159172670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_159060421_159067131_159067192_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
m54284U_201016_223608/110889492/ccs	chr15	+	3966	9	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	0	403	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	46.1078897803836	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296230	93389794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
m54284U_201016_223608/110952579/ccs	chr14	+	4368	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_39	183.463618759372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971724_47973556
m54284U_201016_223608/111084195/ccs	chr14	-	3383	10	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	933	junction_7	64.172991511275	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6430	False	NA	-11	True	ATTAAA	-14	NA	66071357	66056486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
m54284U_201016_223608/111084766/ccs	chr7	-	178	1	Intergenic	novelGene_3822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTAAATCTGTG	1068	False	NA	NA	False	NA	NA	NA	43312191	43312013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_43312000_43312200
m54284U_201016_223608/111214622/ccs	chr1	+	3082	3	NIC	ENSMUSG00000010290.8	novel	3458	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGCAGGCCTGTCATTT	NA	False	NA	NA	False	AATAAA	-15	NA	43137869	43155107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_43138023_43139874_43140042_43152345
m54284U_201016_223608/111214733/ccs	chr19	+	3193	4	ISM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	11424	0	11424	0	3prime_fragment	FALSE	canonical	3	53	junction_1	25.0909456887451	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGGCTGTGCTGTGC	NA	False	NA	34	True	AATAAA	-16	NA	47228773	47247874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_47229111_47241557_47242248_47245150_47245298_47245855
m54284U_201016_223608/111347884/ccs	chr7	-	3565	13	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_12	109.915118765952	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049239	105027816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
m54284U_201016_223608/111348349/ccs	chr7	-	3993	24	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	312.933386438434	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9414	False	NA	0	True	NA	NA	NA	126102609	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126091368_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201016_223608/111348396/ccs	chr8	+	171	1	Intergenic	novelGene_4287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTTTTTTAAAAAAACCC	4188	False	NA	NA	False	NA	NA	NA	46894737	46894908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_46894700_46894900
m54284U_201016_223608/11142309/ccs	chr11	+	2514	14	NIC	ENSMUSG00000033857.13	novel	4064	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	24.1545810765215	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAAAAGGTGCTTCT	NA	False	NA	6	True	CATAAA	-13	NA	118367771	118378599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
m54284U_201016_223608/11142620/ccs	chr19	+	3268	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_9	415.912342193507	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424583_6424639_6424748_6424929_6425687
m54284U_201016_223608/11143319/ccs	chr13	+	3272	18	NIC	ENSMUSG00000021595.19	novel	2834	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	1529	junction_7	131.794376911411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGCATGAGACTTGGA	NA	False	NA	31	True	AATAAA	-19	NA	69760167	69782453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69779435_69779650_69779790_69781346_69781387_69781690
m54284U_201016_223608/11143927/ccs	chr14	-	2670	7	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	0	1215	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	118.11670311838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTGATTGTTGATGGA	NA	False	NA	0	True	AATAAA	-25	NA	21102576	21084866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102522
m54284U_201016_223608/1114527/ccs	chr6	-	1861	7	ISM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	90	403	0	0	5prime_fragment	FALSE	canonical	3	1332	junction_6	190.502333027417	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942411	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
m54284U_201016_223608/111477702/ccs	chr19	-	5022	11	NIC	ENSMUSG00000025154.16	novel	5103	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	112.434380862795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGGTTCTGACTGGTC	4527	False	NA	NA	False	ATTAAA	-17	NA	41790486	41755026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41780185_41780452_41790410
m54284U_201016_223608/111543019/ccs	chr15	-	1104	10	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_7	121.483525276394	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1649	False	NA	NA	False	AATAAA	-23	NA	89313633	89310569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312916_89313031_89313251_89313361_89313579
m54284U_201016_223608/111609129/ccs	chr3	+	4865	24	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_12	50.0424772309506	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6947	False	NA	16	True	AATAAA	-20	NA	20111983	20172654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
m54284U_201016_223608/111674356/ccs	chr2	-	4332	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	16.0161955070022	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6114	False	NA	NA	False	AATAAA	-15	NA	120561999	120548666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182_120561674_120561892
m54284U_201016_223608/111805715/ccs	chr10	-	165	1	Intergenic	novelGene_5199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	12887218	12887053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_12887100_12887200
m54284U_201016_223608/111871509/ccs	chr7	-	2553	5	NIC	ENSMUSG00000030610.14	novel	2269	5	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	41.3098051314697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACACTGTCTCTTCCTTGA	NA	False	NA	-3	True	AATAAA	-18	NA	78496959	78477221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_78477861_78483858_78484051_78489752_78489941_78492583_78494013_78496854
m54284U_201016_223608/111871652/ccs	chr4	+	3528	3	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	860	junction_1	26.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650936	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134651079_134651185_134654130_134654241
m54284U_201016_223608/111872029/ccs	chr16	+	2936	15	NIC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	118.429863856467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2230	False	NA	22	True	AATAAA	-22	NA	21828261	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
m54284U_201016_223608/111872292/ccs	chr2	+	2798	17	NNC	ENSMUSG00000027067.17	novel	920	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	398.410415746125	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867876	84877453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_84868031_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
m54284U_201016_223608/111872418/ccs	chr10	+	178	1	Intergenic	novelGene_5338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAGTGTACATACA	NA	False	NA	NA	False	NA	NA	NA	61464477	61464655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61464500_61464700
m54284U_201016_223608/111937319/ccs	chr13	+	3707	12	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_7	55.6602741252905	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGACTCACTTCAAC	NA	False	NA	NA	False	AATAAA	-34	NA	14129209	14173671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165994_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
m54284U_201016_223608/112066962/ccs	chr7	-	1232	1	NIC	ENSMUSG00000051811.15	novel	585	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4754800_4756000
m54284U_201016_223608/112069065/ccs	chr7	+	5347	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	62.9845919533453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808696	140842663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841200_140841456_140841688_140841818_140842321
m54284U_201016_223608/112133337/ccs	chr1	-	175	1	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATGCAGTTTTGA	NA	False	NA	NA	False	NA	NA	NA	5141410	5141235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_5141200_5141400
m54284U_201016_223608/112199465/ccs	chr7	+	168	1	Intergenic	novelGene_4169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTGTATAAATAAAAATT	7413	False	NA	NA	False	NA	NA	NA	140983811	140983979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140983800_140984000
m54284U_201016_223608/112264138/ccs	chr3	-	242	1	Intergenic	novelGene_1408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACATTCACTGA	NA	False	NA	NA	False	AAGAAA	-44	NA	53435476	53435234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_53435200_53435500
m54284U_201016_223608/112265367/ccs	chr1	+	2806	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.760155719501	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723734_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201016_223608/112265853/ccs	chr10	+	2485	15	ISM	ENSMUSG00000019846.12	ENSMUST00000019992.6	6046	38	55	48673	0	3848	5prime_fragment	FALSE	canonical	0	0	junction_6	2.71052370871575	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTAAGCTTGAGGAAT	NA	False	NA	NA	False	AATAAA	-12	NA	38841565	38937511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349
m54284U_201016_223608/112329266/ccs	chrX	+	5059	1	Intergenic	novelGene_9658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGTTTTAGTCTCCAT	NA	False	NA	NA	False	NA	NA	NA	148930495	148935554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_148930500_148935600
m54284U_201016_223608/112329996/ccs	chr19	-	2394	16	NNC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	0	-15569	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	103.870346533016	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCTTTCCTGCATTTT	NA	False	NA	NA	False	AATAAA	-6	NA	23251182	23207667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_23207912_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
m54284U_201016_223608/112330655/ccs	chr16	+	233	1	Intergenic	novelGene_8159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATACCACATATTTCC	1921	False	NA	NA	False	NA	NA	NA	21932978	21933211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_21933000_21933200
m54284U_201016_223608/112330889/ccs	chr5	+	1390	9	NIC	ENSMUSG00000029168.15	novel	5191	13	NA	NA	0	98	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	19.6050854372023	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTCCCTTATTTTATA	NA	False	NA	4	True	AATAAA	-13	NA	30869237	30944376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_30869347_30902565_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30944046
m54284U_201016_223608/112460890/ccs	chr11	+	184	1	Intergenic	novelGene_6218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCGGACTTCAAAACTTC	NA	False	NA	NA	False	NA	NA	NA	94799485	94799669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94799500_94799700
m54284U_201016_223608/112526764/ccs	chr5	-	6646	17	NNC	ENSMUSG00000039477.17	novel	6487	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_15	45.1725857130185	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCTCGTTTCTCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	142803417	142740543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759804_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142778759_142778916_142800769_142801201_142803026
m54284U_201016_223608/112527217/ccs	chr17	-	3943	7	NIC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	0	-1484	intron_retention	FALSE	canonical	3	548	junction_6	43.8545575992077	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGTGTATATGTGTG	NA	False	NA	-3	True	AATAAA	-23	NA	56597511	56585959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56593296_56593447_56593647_56594793_56594877_56597453
m54284U_201016_223608/112591983/ccs	chr11	-	6167	24	NNC	ENSMUSG00000017631.20	novel	6271	23	NA	NA	-227	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_23	55.4650727135133	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCATGGTGTGGTTGTT	NA	False	NA	-2	True	AATAAA	-35	NA	76514611	76307560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76513002_76514161_76514490
m54284U_201016_223608/112723050/ccs	chr7	-	1239	10	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	1	32	junction_8	1099.68208649501	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635780	44626181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631315_44632909_44633012_44635706
m54284U_201016_223608/112723958/ccs	chr3	-	497	6	NNC	ENSMUSG00000027679.14	novel	659	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_4	1382.49918625654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATTAGTCTACTTATGA	NA	False	NA	-84	True	AATAAA	-20	NA	34135459	34131582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134375_34134432_34135334
m54284U_201016_223608/11272422/ccs	chr9	+	2843	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	130.778145993082	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201016_223608/112724763/ccs	chr10	+	893	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	3231.47152582569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662519	80665118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80662740_80664294_80664468_80664544_80664631_80664704
m54284U_201016_223608/11272761/ccs	chr8	-	1808	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	751	junction_3	220.170342216741	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
m54284U_201016_223608/11273107/ccs	chr1	-	4270	1	NIC	ENSMUSG00000054770.17	novel	5016	10	NA	NA	14503	-36582	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCCATTTAAATGGAGAG	1662	False	NA	NA	False	NA	NA	NA	58043612	58039342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_58039300_58043600
m54284U_201016_223608/112788912/ccs	chr5	+	2160	14	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_11	68.5178679240099	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
m54284U_201016_223608/112789230/ccs	chr3	+	2464	11	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	0	-1988	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	22.5690052948729	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAGAAAAAAAAAA	4416	False	NA	NA	False	NA	NA	NA	89344060	89356271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89344088_89346823_89346909_89350407_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
m54284U_201016_223608/112854249/ccs	chr11	-	925	7	NIC	ENSMUSG00000018565.18	novel	1454	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_3	199.363710060003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9891	False	NA	0	True	AATAAA	-30	NA	69871087	69859049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69859367_69859921_69860023_69860318_69860415_69865865_69866087_69870655_69870737_69870824_69870886_69871039
m54284U_201016_223608/113049691/ccs	chr7	+	181	1	Intergenic	novelGene_3726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGATAAATAAATAAAGGCA	526	False	NA	NA	False	NA	NA	NA	27195679	27195860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_27195700_27195900
m54284U_201016_223608/113049894/ccs	chr11	-	2425	13	NIC	ENSMUSG00000000384.16	novel	2347	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	184.937433113652	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGGCCACTGGCTTTTC	NA	False	NA	-6	True	AATAAA	-18	NA	6576067	6565598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
m54284U_201016_223608/113051744/ccs	chr2	-	7419	34	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39360	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_26	37.8594859912611	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1530	False	NA	-4	True	AATAAA	-19	NA	59881054	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
m54284U_201016_223608/113247206/ccs	chr17	-	1528	5	NIC	ENSMUSG00000039615.10	novel	1408	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1486	junction_1	48.5714679621689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGCTGGTGCAGT	6753	False	NA	-17	True	AATAAA	-17	NA	26051927	26049607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26051219_26051665
m54284U_201016_223608/11337956/ccs	chr2	-	6088	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_15	36.7544426328905	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8072	False	NA	-5	True	AATAAA	-26	NA	121101888	121028731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
m54284U_201016_223608/11338674/ccs	chr5	+	2418	9	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	210.391747699381	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495369	117516666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_117495539_117501657_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
m54284U_201016_223608/113443023/ccs	chr17	+	1002	4	NIC	ENSMUSG00000013766.12	novel	464	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	215.629826838084	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGAGAGCTGTCTGTG	NA	False	NA	20	True	NA	NA	NA	35295877	35297780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35295936_35296110_35296183_35296812_35296939_35297034
m54284U_201016_223608/113445130/ccs	chr2	+	900	8	NNC	ENSMUSG00000017299.14	novel	656	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_7	240.105249031013	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGTGTTGTGTTCAGT	NA	False	NA	13	True	NA	NA	NA	164587933	164601479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164601171
m54284U_201016_223608/113445221/ccs	chr1	+	3558	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	8616	0	intron_retention	FALSE	canonical	3	27	junction_1	87.8121836184293	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34899533	34918661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_34899885_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
m54284U_201016_223608/113509515/ccs	chr1	+	8247	23	NIC	ENSMUSG00000056268.16	novel	8206	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	11.4355000396583	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGTGGTGATGGCT	NA	False	NA	11	True	AATAAA	-17	NA	138891465	139103781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_138891624_138893903_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
m54284U_201016_223608/113573961/ccs	chr16	-	3028	16	NIC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	78.1211594611572	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540772	17469084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
m54284U_201016_223608/113574037/ccs	chrX	+	6875	55	NIC	ENSMUSG00000031093.15	novel	6665	53	NA	NA	-153	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_53	30.6312698293431	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCGAAGTGAAGGAAATA	NA	False	NA	8	True	AATAAA	-20	NA	35152331	35340215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35273595_35273635_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339569_35339588_35339751
m54284U_201016_223608/113574156/ccs	chrX	+	4370	12	NIC	ENSMUSG00000019558.15	novel	3964	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	365	junction_8	42.9568301460705	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716755	72726108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72717657_72719243_72719376_72720255_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
m54284U_201016_223608/113574231/ccs	chr16	+	1481	4	ISM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	-3	0	0	0	intron_retention	TRUE	canonical	3	70	junction_3	17.4547032821147	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTGGTTTATAAAGTG	NA	False	NA	12	True	AATAAA	-16	NA	16964839	16966710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660
m54284U_201016_223608/113575321/ccs	chr3	-	1279	6	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	677	junction_3	303.893007487833	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416805	90407001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90413569_90414851_90414934_90416497
m54284U_201016_223608/113575643/ccs	chr12	+	722	4	NNC	ENSMUSG00000064326.14	novel	924	4	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_1	752.765715360511	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7053	False	NA	17	True	AATAAA	-17	NA	112611310	112615579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_112611519_112613275_112613467_112614258_112614416_112615413
m54284U_201016_223608/113773176/ccs	chr15	-	2703	11	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	155.61375260561	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8429	False	NA	-4	True	AATAAA	-24	NA	79339767	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79339690
m54284U_201016_223608/113836826/ccs	chr14	+	4203	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	185.946439209918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886847_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201016_223608/113902600/ccs	chr16	-	3326	18	NIC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	97.580664883826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540772	17469084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
m54284U_201016_223608/114035419/ccs	chr6	+	1532	11	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	960	junction_9	81.0392497497355	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83034075_83034256_83034376_83034478
m54284U_201016_223608/11404014/ccs	chr2	+	2874	3	NIC	ENSMUSG00000048707.10	novel	2787	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	142	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTTGCCTTCTTTAC	NA	False	NA	14	True	AATAAA	-16	NA	25152629	25159897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25154566_25158843_25159252_25159367
m54284U_201016_223608/11404019/ccs	chr8	-	195	1	Intergenic	novelGene_4554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTCAGAGCCCACCCC	NA	False	NA	NA	False	NA	NA	NA	121317921	121317726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_121317700_121317900
m54284U_201016_223608/11405303/ccs	chr2	+	3034	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	207.851772604902	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119891_130120075
m54284U_201016_223608/114163970/ccs	chr11	-	169	1	Intergenic	novelGene_6448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	115234202	115234033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115234000_115234200
m54284U_201016_223608/114164364/ccs	chr7	+	3272	10	NIC	ENSMUSG00000031016.10	novel	3419	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	119.043409449383	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAAATCTTCACGGTG	NA	False	NA	26	True	ATTAAA	-23	NA	109721252	109742493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
m54284U_201016_223608/114166461/ccs	chr9	+	190	1	Intergenic	novelGene_4863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAGTCAACCTTGTATG	7158	False	NA	NA	False	NA	NA	NA	64186477	64186667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64186500_64186700
m54284U_201016_223608/114230196/ccs	chr1	-	4070	6	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	0	-638	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	157.591116500899	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8645	False	NA	-15	True	AATAAA	-23	NA	88205301	88190830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88202763_88202820_88204940_88205008_88205095
m54284U_201016_223608/114231273/ccs	chr7	-	180	1	Intergenic	novelGene_3844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATTAC	NA	False	NA	NA	False	NA	NA	NA	45160795	45160615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_45160600_45160800
m54284U_201016_223608/114231559/ccs	chr15	+	206	1	Intergenic	novelGene_7739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTAGGAAAAAAAATCTC	NA	False	NA	NA	False	NA	NA	NA	61892620	61892826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_61892600_61892800
m54284U_201016_223608/114295470/ccs	chr11	+	2683	15	ISM	ENSMUSG00000018507.17	ENSMUST00000018651.14	2909	16	1383	216	-204	0	3prime_fragment	FALSE	canonical	1	1	junction_1	4.86553896169326	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCAAGTCTTCTAGAAG	8124	False	NA	9	True	TATAAA	-11	NA	62466746	62491125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_62466952_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
m54284U_201016_223608/114361621/ccs	chr2	+	3247	10	NIC	ENSMUSG00000068882.14	novel	1563	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1543	junction_5	118.399616282328	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691966	69701854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
m54284U_201016_223608/114362090/ccs	chr14	+	3781	14	NNC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	17.0588955433745	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	26836855	27125868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_26836881_26837154_26837273_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
m54284U_201016_223608/114363012/ccs	chr7	-	1488	12	NIC	ENSMUSG00000006763.15	novel	1849	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	119.649557161427	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGCATCGGGATGATGGT	NA	False	NA	-12	True	AATAAA	-24	NA	46360085	46338727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351917_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
m54284U_201016_223608/114426288/ccs	chr2	-	2669	1	NIC	ENSMUSG00000015335.17	novel	1165	5	NA	NA	4	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCCGTGGACTCTTTCC	NA	False	NA	-3	True	ATTAAA	-16	NA	29983624	29980955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_29981000_29983600
m54284U_201016_223608/114492025/ccs	chr15	-	9174	59	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_21	196.692106552408	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAAATTAAGTATGTTC	NA	False	NA	-40	True	NA	NA	NA	38079098	37968137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009408_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038272_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
m54284U_201016_223608/114559800/ccs	chr11	-	190	1	Intergenic	novelGene_6115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGAGGTGAGCAGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	80347500	80347310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80347300_80347500
m54284U_201016_223608/114624215/ccs	chr17	+	3882	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	172.355233134619	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201016_223608/114688564/ccs	chr15	+	6859	22	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	296	junction_5	31.2219034691325	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTGGAGAGTGTCTAA	NA	False	NA	16	True	AATAAA	-16	NA	58287316	58329589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
m54284U_201016_223608/114688764/ccs	chr5	+	3743	13	NIC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	378	0	intron_retention	FALSE	canonical	3	3618	junction_3	480.048232530394	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	False	NA	38	True	AATAAA	-30	NA	129864439	129875212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
m54284U_201016_223608/114689222/ccs	chr3	+	181	1	Intergenic	novelGene_1501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGAGCAGTTTCTG	5487	False	NA	NA	False	NA	NA	NA	88722405	88722586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88722400_88722600
m54284U_201016_223608/114689380/ccs	chr7	-	3965	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	273.97854979303	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	9414	False	NA	-7	True	NA	NA	NA	126102609	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126091365_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201016_223608/114689434/ccs	chr4	-	2872	13	NIC	ENSMUSG00000028453.11	novel	2771	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	92	junction_5	14.74482018277	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAGTTGTATGTGTGTG	296	False	NA	-6	True	ATTAAA	-16	NA	43010222	43002342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43009280_43009706_43009801_43010001
m54284U_201016_223608/11471354/ccs	chr4	+	3273	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	41.4733385102208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	3337	False	NA	11	True	AATAAA	-21	NA	137392036	137457172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
m54284U_201016_223608/114886411/ccs	chr6	-	1600	4	NIC	ENSMUSG00000048668.17	novel	2015	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	133.417473451652	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTGTCTCAGTGGTC	474	False	NA	NA	False	CATAAA	-34	NA	128339831	128333962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_128335157_128336068_128336318_128339020_128339148_128339801
m54284U_201016_223608/114950150/ccs	chr7	-	878	1	Intergenic	novelGene_3929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAATCTGATT	NA	False	NA	NA	False	AATAAA	-10	NA	81071092	81070214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_81070200_81071100
m54284U_201016_223608/114951026/ccs	chr6	-	3181	17	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	888.462451285225	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875683	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864828_88864938_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
m54284U_201016_223608/114951820/ccs	chr11	-	975	12	NNC	ENSMUSG00000020599.14	novel	2313	17	NA	NA	8486	7970	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	5.1889902519383	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTGTTTGATTTTAT	NA	False	NA	NA	False	TTTAAA	-42	NA	109180406	109138857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_109139004_109139804_109139867_109140852_109140883_109150661_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109180257
m54284U_201016_223608/114952850/ccs	chr4	+	1538	6	NNC	ENSMUSG00000028478.19	novel	1121	6	NA	NA	-644	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	519.17110859523	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAAGCATCTTTAATT	NA	False	NA	21	True	AATAAA	-21	NA	44003807	44032846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_44003885_44012261_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
m54284U_201016_223608/115016469/ccs	chr1	+	1608	8	NIC	ENSMUSG00000026201.13	novel	2876	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	72.9262977118624	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187491	75190886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75187803_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
m54284U_201016_223608/115017103/ccs	chr17	-	3120	16	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	0	-1032	intron_retention	FALSE	canonical	3	665	junction_15	78.5571554135374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8737	False	NA	-4	True	AATAAA	-19	NA	24470321	24442203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24443321_24443881_24444052_24445448_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
m54284U_201016_223608/115018252/ccs	chr12	-	4666	9	NNC	ENSMUSG00000020634.13	novel	2696	7	NA	NA	-108	2218	at_least_one_novel_splicesite	TRUE	canonical	3	27	junction_5	590.777546437743	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAGTAAGACGTGGCTT	NA	False	NA	-18	True	AGTAAA	-21	NA	4957547	4926813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_4927640_4927765_4930772_4933822_4933982_4935720_4935859_4939817_4939854_4941314_4941422_4944537_4944680_4952219_4952273_4957348
m54284U_201016_223608/115146890/ccs	chr8	-	1604	9	NIC	ENSMUSG00000031711.8	novel	1675	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_6	163.083136390615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTGGTACTGAGTT	NA	False	NA	-17	True	AATAAA	-17	NA	83500789	83490249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497967_83497988_83499508_83499641_83500685
m54284U_201016_223608/115149468/ccs	chr1	-	169	1	Intergenic	novelGene_247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAGAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	91475254	91475085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_91475100_91475300
m54284U_201016_223608/115149532/ccs	chr7	+	465	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	625	junction_4	5897.4512503284	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2378	False	NA	27	True	AATAAA	-20	NA	141027543	141031263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031147
m54284U_201016_223608/115213137/ccs	chr17	+	3973	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1624	junction_8	137.35014097004	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026234_88026715_88026964_88028310_88028487_88030758
m54284U_201016_223608/115280197/ccs	chr9	+	183	1	Intergenic	novelGene_4780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGCATAAAGAAGCCA	NA	False	NA	NA	False	NA	NA	NA	54935041	54935224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_54935000_54935200
m54284U_201016_223608/115280557/ccs	chr18	+	646	2	Intergenic	novelGene_8832	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	15	True	NA	NA	NA	20895474	20911828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_20895821_20911528
m54284U_201016_223608/11536525/ccs	chr6	+	168	1	Intergenic	novelGene_3450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCCCATAACCAGCTAG	5691	False	NA	NA	False	NA	NA	NA	120045604	120045772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120045600_120045800
m54284U_201016_223608/11536625/ccs	chr18	-	1617	14	NNC	ENSMUSG00000044252.19	novel	2687	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_13	94.3034884243106	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTGTTTGCTAATCTAA	NA	False	NA	-11	True	ATTAAA	-13	NA	12996437	12889248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996405
m54284U_201016_223608/115409442/ccs	chr16	-	620	1	Intergenic	novelGene_8104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATTATTATAAT	NA	False	NA	NA	False	NA	NA	NA	17294974	17294354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_17294400_17295000
m54284U_201016_223608/115475451/ccs	chr17	+	1171	6	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	166.883672059312	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_25459339_25459417_25459617_25460037_25460232_25460661_25460836_25461132_25461197_25461427
m54284U_201016_223608/115477327/ccs	chr12	-	3504	12	NIC	ENSMUSG00000021238.12	novel	3399	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	51.5315838319705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTTTTCCTTCTTTTG	NA	False	NA	NA	False	AATAAA	-33	NA	84497740	84477490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486632_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
m54284U_201016_223608/115540205/ccs	chr6	-	176	1	Intergenic	novelGene_3468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTATGATATTG	NA	False	NA	NA	False	NA	NA	NA	120830997	120830821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120830800_120831000
m54284U_201016_223608/115541587/ccs	chr3	+	2601	4	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	2809	junction_3	164.544489086961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87813627	87823439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87814022_87820397_87820759_87821358_87821545_87821779
m54284U_201016_223608/115542477/ccs	chrX	+	4929	12	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	0	1702	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_11	449.962110434252	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTCATGGTATTTTA	NA	False	NA	16	True	NA	NA	NA	74460302	74499309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466505_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493749_74494289_74498147_74499157
m54284U_201016_223608/115542508/ccs	chr5	+	4675	18	NIC	ENSMUSG00000035851.15	novel	4346	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	75.8017812099563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952079	86984518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
m54284U_201016_223608/115607485/ccs	chr14	+	613	2	NIC	ENSMUSG00000101009.7	novel	857	5	NA	NA	388	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTTCACGAGTGTGT	NA	False	NA	NA	False	AATAAA	-31	NA	76915481	76924548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_76915820_76924273
m54284U_201016_223608/115671753/ccs	chr3	-	2513	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	178	junction_5	104.120554376886	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662195	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
m54284U_201016_223608/115673836/ccs	chr2	+	1470	15	NIC	ENSMUSG00000076441.10	novel	1696	16	NA	NA	94	0	combination_of_known_splicesites	FALSE	canonical	3	195	junction_12	721.33651817233	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCTGCGTGTGTGCC	NA	False	NA	27	True	ATTAAA	-22	NA	31360312	31410684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31404690_31404848_31408737_31408804_31410383
m54284U_201016_223608/115803833/ccs	chr14	-	155	1	Intergenic	novelGene_7496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTGACTTGAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	58172257	58172102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_58172100_58172300
m54284U_201016_223608/115804894/ccs	chrX	-	2129	13	NNC	ENSMUSG00000031297.15	novel	2371	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_12	572.923418142037	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100129011	100122815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128426_100128585_100128877
m54284U_201016_223608/115868877/ccs	chr1	+	5102	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	108	junction_14	13.9013277632119	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCCATGTGTGATTTAT	NA	False	NA	10	True	TATAAA	-22	NA	74700903	74737136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_74701049_74712002_74712170_74718056_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
m54284U_201016_223608/115870471/ccs	chr8	-	1991	1	NIC	ENSMUSG00000004994.13	novel	2119	10	NA	NA	0	-4209	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGATACAAACAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	84997009	84995018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84995000_84997000
m54284U_201016_223608/115870553/ccs	chr2	+	5916	34	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	20.7397623189571	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	35022245	35068834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
m54284U_201016_223608/115933911/ccs	chr6	-	110	1	Intergenic	novelGene_3152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCCGCTCTTGACTTGT	9035	False	NA	NA	False	NA	NA	NA	30234720	30234610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_30234600_30234700
m54284U_201016_223608/115934699/ccs	chr13	-	2024	16	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	328	junction_3	1826.77581912323	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540291_58541009_58541180_58541505_58541574_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
m54284U_201016_223608/115934899/ccs	chrX	-	1862	9	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	238	junction_8	106.849119673491	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963329	138907553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928316_138928452_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
m54284U_201016_223608/115935777/ccs	chr7	+	3409	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	263.342314108462	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7239	False	NA	21	True	ATTAAA	-16	NA	109617521	109655322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653206_109653324_109654223_109654345_109655160
m54284U_201016_223608/115999828/ccs	chr5	+	2740	15	NNC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	0	-1534	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	55.6278175163528	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	20	True	AATAAA	-25	NA	143803585	143839535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_143803756_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
m54284U_201016_223608/116000794/ccs	chr4	+	222	2	Antisense	novelGene_ENSMUSG00000088545.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCATCATTAAAAGTAAG	7236	False	NA	NA	False	NA	NA	NA	155768573	156109400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_+_155768625_156109229
m54284U_201016_223608/11601944/ccs	chr1	+	5694	29	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	38.2373762015062	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254751	87378518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335259_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
m54284U_201016_223608/11602074/ccs	chr16	+	3222	11	NNC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	36.5383360321731	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010810	10060915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10055029_10055097_10058424_10058511_10058730
m54284U_201016_223608/11602509/ccs	chr11	-	145	1	Intergenic	novelGene_6321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACAGCCAAGTGTGATGT	NA	False	NA	NA	False	NA	NA	NA	100209945	100209800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_100209800_100209900
m54284U_201016_223608/11602644/ccs	chr15	+	1418	8	NIC	ENSMUSG00000052369.9	novel	1623	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	50.2548606644985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCACTGTCTCTGACTGC	7707	False	NA	11	True	AATAAA	-17	NA	97862136	97868156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_97862206_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
m54284U_201016_223608/116131833/ccs	chr7	-	182	1	Intergenic	novelGene_3824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAGAAATTTCATAAATTC	NA	False	NA	NA	False	NA	NA	NA	43696031	43695849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_43695800_43696000
m54284U_201016_223608/116197252/ccs	chr9	+	1153	7	NIC	ENSMUSG00000032397.8	novel	1841	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_2	1027.99578468656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9543	False	NA	14	True	AATAAA	-14	NA	64188862	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_64188930_64195395_64195526_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
m54284U_201016_223608/116197515/ccs	chr6	-	202	1	Intergenic	novelGene_3107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAATGTTTGTACAATA	NA	False	NA	NA	False	TTTAAA	-6	NA	11937614	11937412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_11937400_11937600
m54284U_201016_223608/116197743/ccs	chr10	+	5852	33	NIC	ENSMUSG00000034560.7	novel	5858	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	59.380057350406	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAAACTGTCCTTCCAT	NA	False	NA	14	True	AATAAA	-17	NA	83379804	83432337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386750_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
m54284U_201016_223608/116263202/ccs	chr12	+	2468	12	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	59.1121640094854	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1583	False	NA	11	True	AATAAA	-16	NA	84363625	84390497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_84363820_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
m54284U_201016_223608/116327701/ccs	chr3	+	4250	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	80.4191759242328	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8618	False	NA	15	True	ATTAAA	-17	NA	88522673	88555359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
m54284U_201016_223608/116328806/ccs	chr8	+	167	1	Intergenic	novelGene_4541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAAAGAGAGAGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	120303072	120303239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_120303100_120303200
m54284U_201016_223608/116392006/ccs	chr13	+	3195	29	NNC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	110.683244496378	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	18901459	19050981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_18901507_18907357_18907397_18923615_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
m54284U_201016_223608/116393016/ccs	chr2	+	1980	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	803.725630354594	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
m54284U_201016_223608/116394324/ccs	chr7	-	2128	12	NNC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_11	244.399212778216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	False	NA	-12	True	AATAAA	-19	NA	37806959	37797408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806618
m54284U_201016_223608/116460358/ccs	chr11	-	3137	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.471167808096	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
m54284U_201016_223608/116523822/ccs	chr7	+	1225	8	NNC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	173	junction_2	1220.27114751984	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	3840	False	NA	18	True	ATTAAA	-17	NA	140972111	140982881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_140972232_140975961_140976082_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
m54284U_201016_223608/116523917/ccs	chr13	+	187	1	Intergenic	novelGene_6964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCATTACTTATACCTGAC	NA	False	NA	NA	False	NA	NA	NA	9797827	9798014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_9797800_9798000
m54284U_201016_223608/116654843/ccs	chr5	-	5194	17	NIC	ENSMUSG00000038780.15	novel	2725	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	29	junction_9	74.3727678236463	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTCCTTCCTCTCTTTC	NA	False	NA	-7	True	AATAAA	-20	NA	144902657	144813304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_144816267_144817434_144817511_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
m54284U_201016_223608/116720085/ccs	chr15	-	2017	11	NNC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_2	106.776823327911	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670346	99633472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_99634318_99636545_99636703_99637145_99637203_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
m54284U_201016_223608/116722161/ccs	chr11	-	1378	8	NIC	ENSMUSG00000020457.14	novel	1546	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	666.583705722465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGAGGTTTGCTGTG	NA	False	NA	-1	True	TATAAA	-34	NA	3216393	3199906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_3200366_3202159_3202283_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
m54284U_201016_223608/116850909/ccs	chr6	-	172	1	Intergenic	novelGene_3228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	39537636	39537464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39537500_39537600
m54284U_201016_223608/116853269/ccs	chr2	+	3990	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	11	junction_2	132.928800926295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210902	144249596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_144211078_144213524_144213714_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
m54284U_201016_223608/116916881/ccs	chr18	+	2423	7	NIC	ENSMUSG00000024317.16	novel	2422	8	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	154.918258015854	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTGTAAAAAACCTTTT	NA	False	NA	10	True	AATAAA	-21	NA	21134339	21160592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21153944_21154057_21157465_21157574_21159142
m54284U_201016_223608/116917194/ccs	chr15	-	2082	8	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	363.061978180035	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432145	98416701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_98417429_98418198_98418307_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
m54284U_201016_223608/116918851/ccs	chr9	-	1852	10	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	18.6474769087329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGCTTGGGGGAGGGG	NA	False	NA	2	True	AATAAA	-36	NA	108474779	108456060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097_108474180_108474406
m54284U_201016_223608/116982512/ccs	chr2	+	3532	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	0	1806	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	215.029720299881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAAATAAAA	2378	False	NA	NA	False	TTTAAA	-8	NA	90770802	90845523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
m54284U_201016_223608/116982769/ccs	chr11	+	3471	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_1	53.324624433129	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3915	False	NA	14	True	ATTAAA	-30	NA	3152733	3194588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
m54284U_201016_223608/117048600/ccs	chr10	-	2364	7	NNC	ENSMUSG00000025358.17	novel	2971	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_6	448.644780298277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8247	False	NA	-21	True	ATTAAA	-15	NA	128540900	128533812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540479
m54284U_201016_223608/117049993/ccschrUn	chrUn_JH584304v1	-	1667	9	Intergenic	novelGene_9751	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_2	293.962476346897	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACTCATGTGAGCCGT	NA	False	NA	-9	True	NA	NA	NA	59716	52162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_53770_54335_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
m54284U_201016_223608/117178424/ccs	chr15	+	197	1	Intergenic	novelGene_7712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTCAGCTCCTCACTT	NA	False	NA	NA	False	NA	NA	NA	52938949	52939146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_52938900_52939100
m54284U_201016_223608/117180928/ccs	chr4	+	201	1	Intergenic	novelGene_2384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATGCCACCACACCTGG	NA	False	NA	NA	False	NA	NA	NA	149378364	149378565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149378400_149378600
m54284U_201016_223608/117181144/ccs	chr11	+	193	1	Intergenic	novelGene_5654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3566504	3566697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_3566500_3566700
m54284U_201016_223608/117244036/ccs	chr10	+	2979	19	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	306.115592828656	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171916	21244797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
m54284U_201016_223608/117309859/ccs	chr2	+	4655	9	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_6	38.0944549770698	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007197	181025421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024338_181024408_181024497_181024591_181024954_181025050
m54284U_201016_223608/117312014/ccs	chr9	+	4022	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_11	31.7888441476707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	4669	False	NA	69	True	AATACA	-21	NA	69305204	69340404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69332938_69333024_69334132_69334184_69335597_69335857_69339322
m54284U_201016_223608/11732741/ccs	chr2	+	2722	1	NIC	ENSMUSG00000026810.13	novel	869	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCATCCTTGCTCTG	4773	False	NA	23	True	AATAAA	-24	NA	32460869	32463591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32460900_32463600
m54284U_201016_223608/11733816/ccs	chr6	+	197	1	Intergenic	novelGene_3140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAATAGCAACAACAACAAA	NA	False	NA	NA	False	NA	NA	NA	29816212	29816409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29816200_29816400
m54284U_201016_223608/117375267/ccs	chr15	+	2328	6	NNC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	0	416	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	42.1454623892063	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCACCGTGTAGACTAG	3544	False	NA	NA	False	NA	NA	NA	76253097	76256053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_76253741_76253851_76253901_76254055_76254155_76254361_76254454_76254531_76254655_76254731
m54284U_201016_223608/117376494/ccs	chr16	+	5476	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	346.60719250823	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492981_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201016_223608/117377278/ccs	chr14	+	7623	29	NIC	ENSMUSG00000042323.18	novel	5154	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_26	44.4163396115641	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8247	False	NA	14	True	AATAAA	-21	NA	30741126	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
m54284U_201016_223608/117442852/ccs	chr7	+	1370	4	NNC	ENSMUSG00000064264.15	novel	1159	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	89.1777251709566	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGAGCTGCGTGAGTGT	NA	False	NA	36	True	AATAAA	-30	NA	24206554	24215107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214461
m54284U_201016_223608/117639385/ccs	chr13	-	4511	11	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	-89	intron_retention	FALSE	canonical	3	2035	junction_5	142.283554917636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATCTTTCTATCCCTGA	NA	False	NA	-23	True	AATAAA	-16	NA	97334803	97312927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97318522_97320184_97320315_97322075_97322178_97325469_97327787_97330629_97330776_97334533
m54284U_201016_223608/117703524/ccs	chr12	+	2726	7	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1278	junction_1	250.508150233347	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992307	80997281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
m54284U_201016_223608/117769459/ccs	chr5	-	3775	21	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	0	-1969	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	233.313196154868	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996393	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988678_27988772_27993640_27993776_27996196
m54284U_201016_223608/117835191/ccs	chr17	+	2606	20	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_6	132.182992439666	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	35	True	AATAAA	-26	NA	56891981	56913294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
m54284U_201016_223608/117835782/ccs	chr2	+	1037	1	FSM	ENSMUSG00000083097.4	ENSMUST00000118786.2	435	1	-117	-485	-117	485	mono-exon	FALSE	NA	NA	NA	NA	NA	850	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTCCATGACCAAGATA	NA	False	NA	NA	False	NA	NA	NA	153667973	153669010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_153668000_153669000
m54284U_201016_223608/117966748/ccs	chr17	+	1903	8	ISM	ENSMUSG00000061126.6	ENSMUST00000003413.7	1599	12	13567	-795	3778	0	3prime_fragment	FALSE	canonical	3	49	junction_7	8.14912039825809	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTGTGCTCCGTTTA	NA	False	NA	NA	False	ACTAAA	-18	NA	32701002	32712248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_32701186_32702178_32702447_32705743_32705811_32705919_32706050_32708593_32708728_32710116_32710182_32710780_32710864_32711275
m54284U_201016_223608/1180304/ccs	chr5	+	932	4	NIC	ENSMUSG00000034211.15	novel	832	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	350.330637477734	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCAGCTTGATTTT	791	False	NA	23	True	CATAAA	-12	NA	129792597	129795544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129792614_129792747_129792959_129793790_129793931_129794979
m54284U_201016_223608/118031302/ccs	chr16	-	2004	9	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	582	at_least_one_novel_splicesite	FALSE	canonical	3	309	junction_2	620.677741968407	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGTTGGTTTTCTT	NA	False	NA	-23	True	AATAAA	-35	NA	22084676	22064615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
m54284U_201016_223608/118032459/ccs	chr2	-	5179	26	NNC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	0	1394	at_least_one_novel_splicesite	FALSE	canonical	3	206	junction_9	120.929824278381	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081296	53026855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
m54284U_201016_223608/118227987/ccs	chr6	-	3217	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	237	junction_2	20.6225604617855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401893	128386406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_128387381_128387455_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
m54284U_201016_223608/118292539/ccs	chr7	-	1577	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	121	0	combination_of_known_junctions	FALSE	canonical	3	386	junction_1	117.813647577671	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5561	False	NA	-10	True	AATAAA	-13	NA	44519091	44512492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
m54284U_201016_223608/118294370/ccs	chr2	-	174	1	Intergenic	novelGene_664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATCCTTATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	29197945	29197771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29197800_29197900
m54284U_201016_223608/118360792/ccs	chr8	+	3592	18	NIC	ENSMUSG00000031565.19	novel	2915	16	NA	NA	-134	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	81.2204910480721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26022006	26064801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_26022178_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
m54284U_201016_223608/118424444/ccs	chrX	+	2379	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	397	junction_1	981.218107867263	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
m54284U_201016_223608/118426201/ccs	chr7	-	2314	20	NIC	ENSMUSG00000031090.15	novel	2641	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_19	15.3155181744827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTCTTTTTAAAGTGT	NA	False	NA	-16	True	TATAAA	-4	NA	143376578	143349586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143376395
m54284U_201016_223608/118426411/ccs	chr4	+	664	3	Intergenic	novelGene_2281	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	52	junction_1	9.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTATATCTTTTCTGA	4294	False	NA	3	True	NA	NA	NA	138225895	138255983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_138226002_138226562_138226737_138255599
m54284U_201016_223608/118490587/ccs	chr4	+	3199	23	NIC	ENSMUSG00000041351.17	novel	3168	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	41.2645416392114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	9950	False	NA	11	True	AATAAA	-21	NA	137434832	137457172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137434972_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455539_137455675_137455838_137455880_137456185
m54284U_201016_223608/118491932/ccs	chr1	+	3246	13	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_8	115.942843916973	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817203	82874102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872196_82872289_82872719
m54284U_201016_223608/118557161/ccs	chr9	+	4051	3	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	39520	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAACAATTCAGAAGTG	NA	False	NA	NA	False	AATACA	-42	NA	13613275	13620684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_13613418_13613539_13613652_13616887
m54284U_201016_223608/118557248/ccs	chr17	-	2801	12	NIC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_2	96.5253360308462	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3823	False	NA	NA	False	ATTAAA	-21	NA	80203480	80156491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80157708_80159953_80160386_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
m54284U_201016_223608/118621022/ccs	chr17	-	2434	7	NIC	ENSMUSG00000024097.12	novel	1040	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1657	junction_4	228.054391660313	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
m54284U_201016_223608/118685971/ccs	chr10	-	4022	13	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	153	junction_4	79.8332898399325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332176	81322290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
m54284U_201016_223608/118687863/ccs	chr17	-	1938	6	NIC	ENSMUSG00000024436.17	novel	1079	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1264	junction_3	62.8477525453377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	4296	False	NA	-6	True	AATAAA	-21	NA	36227281	36221270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_36221849_36222310_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
m54284U_201016_223608/118752618/ccs	chr18	+	8160	47	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	42.1886124091944	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	107	False	NA	10	True	AATAAA	-19	NA	67933176	68018241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67938289_67938354_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
m54284U_201016_223608/118818443/ccs	chr11	+	188	1	Intergenic	novelGene_6355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCAGGCAGTGGTG	NA	False	NA	NA	False	NA	NA	NA	102686210	102686398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_102686200_102686400
m54284U_201016_223608/118818923/ccs	chr10	-	3742	9	ISM	ENSMUSG00000019917.11	ENSMUST00000220156.2	1821	10	349	22493	349	0	5prime_fragment	FALSE	canonical	3	43	junction_1	6.39824194603486	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTATGTATTTCCTAA	NA	False	NA	-29	True	AATAAA	-15	NA	59057320	58999941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
m54284U_201016_223608/118948199/ccs	chr17	+	5806	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	95.0668937417979	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004421	29057518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29004515_29016706_29016757_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
m54284U_201016_223608/118948870/ccs	chr14	-	159	1	Intergenic	novelGene_7513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATCTTTTAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	64869047	64868888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_64868900_64869000
m54284U_201016_223608/119014049/ccs	chr5	+	3210	18	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	23.627296395231	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578303	129648448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
m54284U_201016_223608/119014238/ccs	chr5	+	1739	12	NIC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	0	255	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	225.696644207688	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	20	True	AATAAA	-21	NA	124717228	124734905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124733615_124733752_124733865_124733903_124733980
m54284U_201016_223608/119079376/ccs	chr10	+	167	1	Intergenic	novelGene_5390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTTGCTGCCTGGTGGT	NA	False	NA	NA	False	NA	NA	NA	70058194	70058361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_70058200_70058400
m54284U_201016_223608/119081137/ccs	chr8	-	176	1	Intergenic	novelGene_4416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	95938272	95938096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_95938100_95938300
m54284U_201016_223608/119144723/ccs	chr12	-	2953	1	Antisense	novelGene_ENSMUSG00000034601.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCCCTGAGAGCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	71189153	71186200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_-_71186200_71189200
m54284U_201016_223608/119144948/ccs	chr4	-	3738	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	119	junction_13	62.6646971262766	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
m54284U_201016_223608/119145012/ccs	chr19	-	160	1	Intergenic	novelGene_9072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	3826195	3826035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_3826000_3826200
m54284U_201016_223608/119145731/ccs	chr16	+	3164	10	ISM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	-1	-1	0	0	intron_retention	FALSE	canonical	3	1315	junction_4	273.717210111296	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
m54284U_201016_223608/119277463/ccs	chr9	+	1302	1	Intergenic	novelGene_4691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGTGCAAAAGATTAATT	NA	False	NA	NA	False	NA	NA	NA	31119637	31120939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_31119600_31120900
m54284U_201016_223608/119278294/ccs	chr9	-	166	1	Intergenic	novelGene_4653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTAAAAAGAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	21007124	21006958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21007000_21007100
m54284U_201016_223608/11929770/ccs	chr17	+	2011	5	NIC	ENSMUSG00000067942.7	novel	2087	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	20.5836707124847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGCACATAAGTTCTTAA	NA	False	NA	NA	False	AATAAA	-15	NA	21229212	21263306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21261684
m54284U_201016_223608/119407221/ccs	chr9	+	196	1	Intergenic	novelGene_4968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCTGATGTTGAGTGTT	1970	False	NA	NA	False	NA	NA	NA	78371604	78371800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_78371600_78371800
m54284U_201016_223608/119407588/ccs	chr9	+	3712	21	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	72.2328872467382	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	17	True	AATAAA	-18	NA	70450075	70499516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480795_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
m54284U_201016_223608/119408920/ccs	chr5	+	992	8	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	459	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	551.935037585299	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTTTTTTTTTCTCTT	9078	False	NA	11	True	AATAAA	-20	NA	124045337	124065655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055344_124060242_124060327_124062793_124062911_124065060_124065201_124065312
m54284U_201016_223608/119538645/ccs	chr13	-	1627	6	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7259	22734	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	38.1386942618648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	1335	False	NA	NA	False	AATAAA	-24	NA	67010194	66974980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_66975488_66976590_66977274_66977723_66977867_67002549_67002611_67002809_67002937_67010088
m54284U_201016_223608/119605968/ccs	chr7	-	199	1	Intergenic	novelGene_3694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGTAAATGAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	19562898	19562699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_19562700_19562900
m54284U_201016_223608/119669414/ccs	chr11	+	2121	19	NIC	ENSMUSG00000034274.12	novel	2235	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	69.3319310755633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTAGCTCCTTGG	NA	False	NA	23	True	ATTAAA	-20	NA	4845342	4878867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_4845379_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
m54284U_201016_223608/119670222/ccs	chr8	-	186	1	Intergenic	novelGene_4247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTATGGCAAAATGTAC	NA	False	NA	NA	False	NA	NA	NA	27635869	27635683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_27635700_27635900
m54284U_201016_223608/119801188/ccs	chr9	-	214	2	Intergenic	novelGene_4964	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	6	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTGCAGCCATT	5918	False	NA	NA	False	NA	NA	NA	78475819	78257774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_78257939_78475769
m54284U_201016_223608/119802618/ccs	chr11	+	1847	13	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_2	39.9666527661916	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51154012	51172593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
m54284U_201016_223608/119865547/ccs	chr5	-	2051	12	NIC	ENSMUSG00000001082.13	novel	1907	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	174	junction_11	68.0427672998254	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	False	NA	-7	True	AATAAA	-17	NA	34794533	34790992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
m54284U_201016_223608/119865989/ccs	chr4	+	344	1	Intergenic	novelGene_2204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	97	False	NA	NA	False	NA	NA	NA	132530843	132531187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132530800_132531200
m54284U_201016_223608/119931502/ccs	chr11	+	2796	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_15	307.682395901041	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455259	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473910_115474039_115474151_115474254_115474546
m54284U_201016_223608/119933641/ccs	chr12	+	772	4	NNC	ENSMUSG00000079179.10	novel	812	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	79.4411032708439	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTCTCAGGACAAATTT	NA	False	NA	10	True	AATAAA	-19	NA	3285503	3288273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_3285930_3287346_3287413_3287590_3287661_3288063
m54284U_201016_223608/11995106/ccs	chr17	-	3605	14	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_5	126.05300847955	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201016_223608/120063479/ccs	chr17	+	2619	4	Intergenic	novelGene_8384	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	56.3698106751793	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	False	NA	5	True	NA	NA	NA	17225348	17261649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_17225389_17257537_17257665_17257906_17257968_17259258
m54284U_201016_223608/120063591/ccs	chr16	-	4007	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_17	327.192188774521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
m54284U_201016_223608/120128765/ccs	chr12	+	4638	14	NIC	ENSMUSG00000048285.10	novel	4662	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	34.6862522431374	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	787	False	NA	NA	False	AATAAA	-21	NA	70872287	70949008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
m54284U_201016_223608/120326237/ccs	chr11	-	1741	14	NNC	ENSMUSG00000020516.16	novel	3250	10	NA	NA	0	-3168	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	66.844958827948	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTGTGTGCTGT	NA	False	NA	NA	False	AATAAA	-12	NA	86435631	86396592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_86397008_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
m54284U_201016_223608/120522689/ccs	chr15	-	2625	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	0	345	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_18	760.317715022988	700	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCTCTGTCCTCACG	NA	False	NA	-5	True	AATAAA	-18	NA	11399751	11383745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397327_11399571
m54284U_201016_223608/120523339/ccs	chr15	-	2329	1	Intergenic	novelGene_7634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGTCTTGGCTACATTT	9	False	NA	2	True	NA	NA	NA	9357161	9354832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_9354800_9357200
m54284U_201016_223608/120588176/ccs	chrX	+	4484	14	NIC	ENSMUSG00000015214.15	novel	4634	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	19.0688568554895	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGTCTCTGTGTTT	NA	False	NA	11	True	ACTAAA	-24	NA	70408365	70462802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
m54284U_201016_223608/120588721/ccs	chr8	-	3214	19	NIC	ENSMUSG00000031788.15	novel	3277	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	17.8975134489214	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGTGCAATCTGAATC	NA	False	NA	-10	True	ATTAAA	-15	NA	95869145	95826461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
m54284U_201016_223608/120589041/ccs	chr13	-	179	1	Intergenic	novelGene_7124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAATAAAATTGATGT	NA	False	NA	NA	False	NA	NA	NA	58515240	58515061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58515100_58515200
m54284U_201016_223608/12060669/ccs	chrX	+	2808	4	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	31.6789449880446	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643481	134648071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134645667
m54284U_201016_223608/12060903/ccs	chr18	+	324	1	Intergenic	novelGene_8892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATACTAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	35652962	35653286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35653000_35653300
m54284U_201016_223608/120654096/ccs	chr1	-	719	2	Intergenic	novelGene_135	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTATCCATAAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	58808273	58806366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_58806855_58808042
m54284U_201016_223608/120717888/ccs	chr9	+	1284	8	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	238.474231697417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAATAAACTAATGAT	9118	False	NA	-22	True	ATTAAA	-19	NA	15217555	15223373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223113
m54284U_201016_223608/120783867/ccs	chr7	-	4473	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	875	junction_25	153.43558909197	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198273	44182174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
m54284U_201016_223608/120915889/ccs	chr11	+	972	3	NNC	ENSMUSG00000002064.11	novel	586	2	NA	NA	2283	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78138854	78146322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_78138984_78141841_78142039_78145676
m54284U_201016_223608/120979579/ccs	chr6	-	1702	15	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_13	326.611866325291	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGATGTCAGAATAAAA	NA	False	NA	-65	True	GATAAA	-25	NA	148113520	148082807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148107597_148107709_148108030_148108174_148113467
m54284U_201016_223608/120980768/ccs	chr6	-	827	4	NNC	ENSMUSG00000057841.6	novel	906	3	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	8439.08515315625	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785655	115782472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_115782650_115783946_115784129_115784762_115784864_115785288
m54284U_201016_223608/120982062/ccs	chr4	-	3658	2	NIC	ENSMUSG00000036822.7	novel	3856	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGCAACATTGATT	9561	False	NA	0	True	AATAAA	-28	NA	40269850	40259600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_40263082_40269673
m54284U_201016_223608/121111762/ccs	chr15	-	178	1	Intergenic	novelGene_8003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTTCTAGATGTCTC	NA	False	NA	NA	False	NA	NA	NA	102288331	102288153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102288200_102288300
m54284U_201016_223608/121112116/ccs	chr19	-	848	3	NNC	ENSMUSG00000024844.16	novel	758	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	746	junction_2	2648	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8986	False	NA	-8	True	AATAAA	-15	NA	5416391	5414667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_5415187_5415845_5415985_5416201
m54284U_201016_223608/121112387/ccs	chr17	+	2526	13	NIC	ENSMUSG00000024069.15	novel	2148	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	152	junction_5	21.8916206699174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGTGGCAGTGAGGT	NA	False	NA	14	True	TATAAA	-17	NA	74702615	74730662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
m54284U_201016_223608/121112963/ccs	chr2	+	4426	13	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	207.6820988113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90846910
m54284U_201016_223608/121113124/ccs	chr17	+	2527	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-52	-804	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	133.669030527726	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCTGTCTCAA	NA	False	NA	22	True	TATAAA	-16	NA	56347386	56375028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56347552_56351061_56351113_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
m54284U_201016_223608/121176519/ccs	chr9	-	195	1	Intergenic	novelGene_4896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGATCTAGAGTGTTGG	NA	False	NA	NA	False	NA	NA	NA	66395718	66395523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66395500_66395700
m54284U_201016_223608/121177047/ccs	chr15	+	1962	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	420.781759652434	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	195	False	NA	28	True	AATAAA	-14	NA	38662187	38692687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
m54284U_201016_223608/121178490/ccs	chr5	+	512	4	NNC	ENSMUSG00000086219.8	novel	3360	4	NA	NA	0	480	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_3	120.252512101272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTGTTGTTGTTGTTTT	NA	False	NA	10	True	NA	NA	NA	116576778	116600637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_116576898_116577427_116577496_116599782_116599924_116600453
m54284U_201016_223608/12124196/ccs	chr2	+	2370	10	NIC	ENSMUSG00000039108.15	novel	2534	9	NA	NA	0	-281	combination_of_known_junctions	TRUE	canonical	3	24	junction_3	16.1176232049821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCAGATCTTCTCTATA	NA	False	NA	NA	False	AGTAAA	-1	NA	179666779	179676973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_179667106_179668427_179668592_179669692_179669829_179670750_179670868_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
m54284U_201016_223608/121242026/ccs	chr14	+	4258	39	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	178.144586691016	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886767	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201016_223608/121242646/ccs	chr17	-	1331	8	NIC	ENSMUSG00000067148.16	novel	1314	9	NA	NA	0	0	intron_retention	TRUE	canonical	3	702	junction_7	54.3368180511002	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTTTTTTTTGTCTA	NA	False	NA	2	True	AATAAA	-25	NA	46558894	46554845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46555147_46555231_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
m54284U_201016_223608/121309095/ccs	chr19	+	5614	11	ISM	ENSMUSG00000045098.20	ENSMUST00000113972.9	4159	12	748	-1912	0	0	3prime_fragment	FALSE	canonical	3	88	junction_10	64.0924332507356	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3818168	3868303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
m54284U_201016_223608/121309241/ccs	chr11	-	2891	5	NIC	ENSMUSG00000047342.18	novel	3051	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	17.8535710713571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCAGGTTTTTAGTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	62680243	62669212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_62671726_62674497_62674588_62678784_62678871_62679755_62679916_62680201
m54284U_201016_223608/121440035/ccs	chr13	+	4688	28	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	419	junction_24	61.62600149577	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	18901459	19050981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
m54284U_201016_223608/121441055/ccs	chr18	-	769	6	NIC	ENSMUSG00000056671.8	novel	868	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	138.005217292681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTTCTCCAAATGT	NA	False	NA	-14	True	AATAAA	-23	NA	42084282	42008664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42070698_42070757_42084165
m54284U_201016_223608/121504811/ccs	chr4	+	2625	21	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_9	139.994740972652	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155709399_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724236_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201016_223608/121506086/ccs	chr7	+	3926	8	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	719.126794757903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515292	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_16516401_16516480_16516564_16519600_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
m54284U_201016_223608/121635297/ccs	chr17	+	3599	23	NIC	ENSMUSG00000024019.19	novel	2815	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	98.1865318733802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879594	29922333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29879746_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
m54284U_201016_223608/121635350/ccs	chr3	-	269	1	Intergenic	novelGene_1354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCAAGAAACATCATTC	NA	False	NA	NA	False	NA	NA	NA	14685787	14685518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_14685500_14685800
m54284U_201016_223608/121766233/ccs	chr16	+	951	8	NIC	ENSMUSG00000022681.16	novel	1014	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	230.175975270741	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAGATGACTTTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	13637169	13653315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_13637301_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
m54284U_201016_223608/121766647/ccs	chr11	+	3962	23	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	95.0498890318062	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5272	False	NA	21	True	AATAAA	-21	NA	68906922	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68906992_68911855_68912020_68913218_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
m54284U_201016_223608/121831557/ccs	chr14	+	3381	10	NIC	ENSMUSG00000056234.16	novel	4065	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_6	182.100365759865	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCAGTTGTGTTTGTGTT	NA	False	NA	-2	True	ATTAAA	-13	NA	31881894	31901204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896349_31896491_31897895_31898913_31899189_31899331_31899779
m54284U_201016_223608/12190347/ccs	chr9	+	1302	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_9	245.76431548423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTCTTGTGTCTGTC	2377	False	NA	42	True	TATAAA	-28	NA	21323140	21331570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331337
m54284U_201016_223608/12191745/ccs	chr9	+	1769	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	154	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_9	350.727685993311	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446976	59472392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59470149_59470334_59470506_59470598_59471165_59471271_59472103
m54284U_201016_223608/12192165/ccs	chr4	-	189	1	Intergenic	novelGene_2244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGGGGACAGTGAGAT	NA	False	NA	NA	False	NA	NA	NA	135150018	135149829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135149800_135150000
m54284U_201016_223608/121963275/ccs	chr14	+	2855	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	96	-358	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	428.224452615894	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTCTTTTCTGTGT	NA	False	NA	16	True	ATTAAA	-19	NA	34032779	34066864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_34033300_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
m54284U_201016_223608/122096474/ccs	chr11	+	205	1	Intergenic	novelGene_5699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCTGAGAGAAGTAGAGA	NA	False	NA	NA	False	NA	NA	NA	8583686	8583891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_8583700_8583900
m54284U_201016_223608/122226132/ccs	chr2	-	3032	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	0	2339	combination_of_known_junctions	FALSE	canonical	3	55	junction_3	55.3915356550279	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	-3	True	NA	NA	NA	156681740	156672629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681635
m54284U_201016_223608/122226791/ccs	chr12	-	194	1	Intergenic	novelGene_6892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGACTCTCTTCCAG	NA	False	NA	NA	False	NA	NA	NA	110408662	110408468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_110408500_110408700
m54284U_201016_223608/122357061/ccs	chr10	-	3630	7	NIC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	682	junction_2	191.57918293315	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8247	False	NA	-21	True	ATTAAA	-15	NA	128540900	128533812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_128535080_128535340_128535545_128535844_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
m54284U_201016_223608/122423273/ccs	chr2	+	181	1	Intergenic	novelGene_1162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATCTCTTAATTA	NA	False	NA	NA	False	NA	NA	NA	155321721	155321902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155321700_155321900
m54284U_201016_223608/122423662/ccs	chr15	-	2041	12	NIC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	87	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	100.554249163292	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9503	False	NA	-4	True	ATTAAA	-22	NA	98729248	98710677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98728767
m54284U_201016_223608/122486948/ccs	chr7	-	194	1	Intergenic	novelGene_4178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGTTGTTGTTGTTGTT	9308	False	NA	NA	False	NA	NA	NA	143059643	143059449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_143059400_143059600
m54284U_201016_223608/122487338/ccs	chr2	-	178	1	Intergenic	novelGene_655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGGGGGGGGTGTCCA	NA	False	NA	NA	False	NA	NA	NA	28392788	28392610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_28392600_28392800
m54284U_201016_223608/122488688/ccs	chr8	-	1608	1	ISM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	5811	0	4900	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTTTTACAATACACAAA	-10	True	NA	NA	False	NA	NA	NA	84978142	84976534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_84976500_84978100
m54284U_201016_223608/122489184/ccs	chr12	+	2102	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10191	-533	intron_retention	FALSE	canonical	3	10	junction_1	60.256857608814	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17942198	17954143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_17942310_17950611_17950788_17950987_17951049_17952389
m54284U_201016_223608/122489381/ccs	chr7	-	1674	12	NNC	ENSMUSG00000030726.17	novel	1716	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_4	154.789059343876	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTGCCTAGGAGAATTC	NA	False	NA	-10	True	TATAAA	-17	NA	99770673	99732616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742692_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
m54284U_201016_223608/122618765/ccs	chr4	+	3283	15	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	39.6369364948135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931858	155943760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940002_155940588_155940721_155940818_155940987_155941070_155941278_155942449
m54284U_201016_223608/122620201/ccs	chr9	+	2181	16	NNC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	226.806133563937	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904139	86959434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922431_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
m54284U_201016_223608/122684115/ccs	chr4	-	2172	17	NIC	ENSMUSG00000029053.17	novel	2641	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	50.979009160634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGAATAAAGTGTACCG	NA	False	NA	-36	True	NA	NA	NA	155445818	155346556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155441937_155442060_155445608
m54284U_201016_223608/122685970/ccs	chr14	+	1455	10	NNC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	5566	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	267.103022617413	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGTGCAATATGTGTAT	NA	False	NA	NA	False	TATAAA	-20	NA	62569516	62616007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62615332
m54284U_201016_223608/122749501/ccs	chr5	-	1788	11	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_10	480.6057531907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650206	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649257_24649372_24649394_24650063
m54284U_201016_223608/122814891/ccs	chr2	-	4288	5	ISM	ENSMUSG00000052056.15	ENSMUST00000063710.13	5685	6	11688	3	11688	0	3prime_fragment	FALSE	canonical	3	18	junction_4	7.63216876123687	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTGTCGTGGTTTTC	9128	False	NA	-3	True	AATATA	-17	NA	169961452	169950565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938
m54284U_201016_223608/122816786/ccs	chr7	+	847	8	NIC	ENSMUSG00000078765.12	novel	583	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	193.245851659676	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGGTTTCCTTCCAC	NA	False	NA	35	True	AATAAA	-23	NA	30262731	30264789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
m54284U_201016_223608/122880129/ccs	chr8	+	4897	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	75.1550134167154	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763796	85784212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
m54284U_201016_223608/122881631/ccs	chr8	-	4409	20	NIC	ENSMUSG00000031537.16	novel	3977	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	4	junction_8	23.848668784024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGAGTCATGTCATTGA	NA	False	NA	0	True	NA	NA	NA	23196605	23149227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
m54284U_201016_223608/122946228/ccs	chr2	+	3429	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	211.308482255229	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854915	146919920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_146855117_146866427_146866556_146866639_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
m54284U_201016_223608/122947612/ccs	chr17	-	1487	10	NIC	ENSMUSG00000058704.10	novel	1041	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	80.0302411977675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	74602491	74507696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
m54284U_201016_223608/123012315/ccs	chr13	-	177	1	Intergenic	novelGene_7076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGAGAGAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	52747299	52747122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_52747100_52747300
m54284U_201016_223608/123078014/ccs	chr4	-	2078	6	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	293	junction_4	40.5679676592259	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9092	False	NA	NA	False	AATAAA	-14	NA	155976226	155973318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155973626_155973890_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
m54284U_201016_223608/123078951/ccs	chr16	+	2213	7	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	181.921839138559	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104097	48114600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48110476_48111376_48111678_48113273_48113470_48114061
m54284U_201016_223608/123079239/ccs	chr11	+	229	1	Intergenic	novelGene_6038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTGGTCTTTAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	76638356	76638585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76638400_76638600
m54284U_201016_223608/12321776/ccs	chr11	-	209	1	Intergenic	novelGene_6335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGGCAGAGAGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	101360695	101360486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_101360500_101360700
m54284U_201016_223608/123273588/ccs	chr14	-	1360	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	0	328	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	1819.95631815711	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTAATTTCTGTCTTTA	NA	False	NA	-16	True	AGTAAA	-12	NA	36857229	36842452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_36842740_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
m54284U_201016_223608/123273632/ccs	chr2	-	4026	5	NIC	ENSMUSG00000078870.10	novel	912	4	NA	NA	0	2779	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	120.131958695428	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGTGATGTGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	176898214	176882370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176894619_176894675_176898132
m54284U_201016_223608/123275398/ccs	chr11	+	2224	12	NNC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	0	-99	intron_retention	FALSE	canonical	3	172	junction_7	342.859752548116	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTTTATTCATAACCC	NA	False	NA	28	True	AATAAA	-17	NA	80274128	80286972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282216_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
m54284U_201016_223608/123340405/ccs	chr15	-	4433	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	-231	combination_of_known_junctions	FALSE	canonical	3	16	junction_31	58.6938329288105	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1656	False	NA	-10	True	ATTAAA	-18	NA	73295061	73077181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73264192_73264297_73266496_73266594_73294857
m54284U_201016_223608/123406795/ccs	chrX	+	156	1	Intergenic	novelGene_9714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	161444462	161444618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_161444500_161444600
m54284U_201016_223608/123471872/ccs	chr6	-	1728	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	625.701826359972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942411	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942336
m54284U_201016_223608/123535960/ccs	chr15	+	3165	8	ISM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	0	33639	0	0	5prime_fragment	FALSE	canonical	3	18	junction_5	17.128565471225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	3850	False	NA	NA	False	AATAAA	-16	NA	66449428	66483465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
m54284U_201016_223608/123602532/ccs	chr2	-	976	6	NIC	ENSMUSG00000085385.8	novel	933	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.4059821413245	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTCTGCCTTTTAAA	8327	False	NA	-17	True	AATAAA	-12	NA	158203462	158197704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202383_158202520_158202862_158202991_158203324
m54284U_201016_223608/123603768/ccs	chr5	+	1406	8	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_7	487.320872375749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTCTATTCCTTTT	5421	False	NA	43	True	AATAAA	-45	NA	100666322	100695669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100695169
m54284U_201016_223608/123666552/ccs	chr7	-	508	5	NNC	ENSMUSG00000009687.15	novel	1172	9	NA	NA	882	0	intron_retention	FALSE	canonical	3	42	junction_4	22.1923410211721	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTCTTCTGTGAATT	7742	False	NA	-3	True	GATAAA	-23	NA	30736481	30732150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30736452
m54284U_201016_223608/123666635/ccs	chr11	+	1847	3	NNC	ENSMUSG00000058755.4	novel	773	2	NA	NA	1331	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	20	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTCAGTCTTTTAT	879	False	NA	5	True	TTTAAA	-18	NA	4187750	4191026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_4187820_4188405_4188543_4189385
m54284U_201016_223608/123733044/ccs	chr4	-	192	1	Intergenic	novelGene_1743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTTAAAAAAAAAACCTA	NA	False	NA	NA	False	NA	NA	NA	11160234	11160042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11160000_11160200
m54284U_201016_223608/123734487/ccs	chr12	+	182	1	Intergenic	novelGene_6914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAATGCTCTTCTGAG	NA	False	NA	NA	False	NA	NA	NA	111488002	111488184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111488000_111488200
m54284U_201016_223608/123798035/ccs	chr9	-	5636	31	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	19.8072938305284	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCCTGTGAGTGTGCT	NA	False	NA	37	True	ATTAAA	-25	NA	45739937	45678243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
m54284U_201016_223608/123798682/ccs	chr2	-	2309	11	NIC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_6	182.318978715876	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101393	25089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
m54284U_201016_223608/123799206/ccs	chr8	-	796	4	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20943	0	3513	0	3prime_fragment	FALSE	canonical	3	63	junction_3	15.6418242755334	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGGAGAGACCTGCTTTG	NA	False	NA	NA	False	AAAAAG	-1	NA	122650700	122642864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_122643247_122644726_122644883_122650293_122650357_122650505
m54284U_201016_223608/123800239/ccs	chr5	-	4072	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	48	junction_13	182.154238673347	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201016_223608/123864399/ccs	chr7	+	1367	8	NIC	ENSMUSG00000003184.16	novel	2031	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_6	54.0181375435461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647071	44651814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650241_44651096_44651213_44651587
m54284U_201016_223608/123865783/ccs	chr15	+	177	1	Intergenic	novelGene_7868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTACACAAAGCTTCTC	7987	False	NA	NA	False	NA	NA	NA	83043480	83043657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_83043500_83043700
m54284U_201016_223608/12388130/ccs	chr5	-	157	1	Intergenic	novelGene_2795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTTATAAAAATAGATAAA	NA	False	NA	NA	False	NA	NA	NA	115059784	115059627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115059600_115059800
m54284U_201016_223608/12388947/ccs	chr4	-	1745	2	Intergenic	novelGene_2414	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTGGTTTTTTTTAT	NA	False	NA	2	True	NA	NA	NA	153174317	153169840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_153171301_153174032
m54284U_201016_223608/123928846/ccs	chr12	+	1802	5	NNC	ENSMUSG00000079012.12	novel	1658	5	NA	NA	-9694	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	12.328828005938	60	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCTCTCAGCTTGCAG	660	False	NA	18	True	AATACA	-27	NA	104343728	104360516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_104343932_104355322_104355972_104357714_104357989_104358900_104359052_104359991
m54284U_201016_223608/124061955/ccs	chr11	-	2645	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-26093	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_10	155.33219241355	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	NA	False	NA	-2	True	AATAAA	-19	NA	113482698	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113482607
m54284U_201016_223608/124127670/ccs	chr15	+	1242	5	NIC	ENSMUSG00000022359.11	novel	1383	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	21.3131414859471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTTTTGAAGAATCTG	2660	False	NA	27	True	AATAAA	-17	NA	58004772	58022050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_58004978_58011729_58011838_58014001_58014053_58016975_58017101_58021297
m54284U_201016_223608/124127827/ccs	chr9	-	1173	3	Intergenic	novelGene_4774	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	8.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGCTCTGAAGAGAAG	NA	False	NA	NA	False	TTTAAA	-5	NA	53788469	53775951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_53776927_53777088_53777180_53788362
m54284U_201016_223608/124257236/ccs	chrX	+	183	1	Intergenic	novelGene_9704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAATTTCACTCATGA	NA	False	NA	NA	False	NA	NA	NA	158306180	158306363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_158306200_158306400
m54284U_201016_223608/124257461/ccs	chr9	-	1457	5	NIC	ENSMUSG00000063849.7	novel	1665	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	57.2996509587973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGTGTCCTTCTTTA	NA	False	NA	-4	True	AATAAA	-17	NA	57347407	57321243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57322010_57322368_57322756_57342185_57342369_57344699_57344766_57347352
m54284U_201016_223608/124259054/ccs	chr8	-	201	1	Intergenic	novelGene_4276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTTAAAAAAAAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	41629012	41628811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_41628800_41629000
m54284U_201016_223608/124389245/ccs	chr15	+	4675	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	-2087	combination_of_known_junctions	FALSE	canonical	3	69	junction_10	158.303032188269	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	52	False	NA	25	True	AATAAA	-26	NA	34082864	34143683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34140837
m54284U_201016_223608/124454778/ccs	chr8	+	4226	19	NIC	ENSMUSG00000031511.17	novel	4451	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	24.1689654079129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTGCTTCATCTTCCTT	9628	False	NA	17	True	ATTAAA	-27	NA	11808353	11885219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
m54284U_201016_223608/124519671/ccs	chr14	+	1671	10	NNC	ENSMUSG00000021916.17	novel	2018	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	35.7536150291732	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3802	False	NA	8	True	AATAAA	-19	NA	30723632	30733947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_30723835_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
m54284U_201016_223608/124519674/ccs	chr13	-	190	1	Intergenic	novelGene_7068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATCTCTGGGGCTAG	NA	False	NA	NA	False	NA	NA	NA	51341272	51341082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_51341100_51341300
m54284U_201016_223608/1246451/ccs	chr5	+	3110	4	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1125	junction_2	45.6143252352445	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276360	28283660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_28276794_28278544_28278670_28279479_28280160_28281788
m54284U_201016_223608/124651730/ccs	chr8	-	218	1	Intergenic	novelGene_4277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	43719812	43719594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_43719600_43719800
m54284U_201016_223608/124715790/ccs	chr2	-	3426	15	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	136.877291239792	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	6977	False	NA	-12	True	AATAAA	-16	NA	140012484	139961802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140011045_140011076_140012396
m54284U_201016_223608/124716647/ccs	chr4	-	3617	17	NNC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_7	346.656614813204	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
m54284U_201016_223608/124783104/ccs	chr16	+	4748	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.3517753559143	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482726	31692167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
m54284U_201016_223608/124847005/ccs	chr7	+	2858	16	NIC	ENSMUSG00000025477.15	novel	2826	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	42.9959171188252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGCTGCTTATTCTCC	NA	False	NA	19	True	AATAAA	-20	NA	138969024	139159568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_138969381_139033969_139034012_139057910_139058044_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
m54284U_201016_223608/124912309/ccs	chr14	-	3242	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	0	-361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	137.866246923663	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAATACATTAATTTCT	NA	False	NA	-13	True	AATAAA	-27	NA	67952824	67914164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941490_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
m54284U_201016_223608/124913982/ccs	chr8	+	4313	32	NNC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	56.946878143415	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566925	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_3567143_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
m54284U_201016_223608/124978508/ccs	chrX	+	3024	7	NNC	ENSMUSG00000000838.18	novel	4257	16	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	319.232934808842	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722292	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738687_67755872_67756020_67756846_67756930_67759170
m54284U_201016_223608/125044485/ccs	chr15	-	175	1	Intergenic	novelGene_7881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTCTAAAAAAGA	NA	False	NA	-1	True	NA	NA	NA	84413185	84413010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_84413000_84413200
m54284U_201016_223608/125110222/ccs	chr4	+	186	1	Intergenic	novelGene_1982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAAGATGGCATTC	NA	False	NA	NA	False	NA	NA	NA	107224458	107224644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_107224500_107224600
m54284U_201016_223608/125174192/ccs	chr15	-	4473	1	Intergenic	novelGene_7723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	57840026	57835553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_57835600_57840000
m54284U_201016_223608/125175503/ccs	chr11	-	3027	6	NNC	ENSMUSG00000041920.15	novel	4219	6	NA	NA	-1379	888	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	8.20731381147328	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGGTTTTTTGTTGT	1191	False	NA	NA	False	NA	NA	NA	109365803	109342663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_109344221_109345688_109346505_109349302_109349432_109350624_109350769_109354135_109354375_109365661
m54284U_201016_223608/12518377/ccs	chr17	-	3620	1	Antisense	novelGene_ENSMUSG00000001228.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAGAGCAA	2541	False	NA	NA	False	NA	NA	NA	56624341	56620721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_56620700_56624300
m54284U_201016_223608/12519418/ccs	chr16	-	196	1	Intergenic	novelGene_8309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCTCAACCGAGTAG	6890	False	NA	NA	False	NA	NA	NA	89564290	89564094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_89564100_89564300
m54284U_201016_223608/125239458/ccs	chr7	+	3062	3	NNC	ENSMUSG00000050917.6	novel	3030	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCTGTGTCTGCTTTG	8002	False	NA	28	True	ATTAAA	-18	NA	144415122	144418980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_144415570_144415968_144416073_144416469
m54284U_201016_223608/125371341/ccs	chr18	+	3949	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	183.403407594721	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTCTGAGTAGTTGTG	NA	False	NA	16	True	ATTAAA	-27	NA	24338823	24419875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
m54284U_201016_223608/125371799/ccs	chr10	-	1618	7	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_5	494.959482067865	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235256	80228372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231120_80231269_80231430_80234955
m54284U_201016_223608/125372562/ccs	chr6	-	1012	1	Intergenic	novelGene_3315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	70876169	70875157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_70875200_70876200
m54284U_201016_223608/125436357/ccs	chrX	-	3673	14	NNC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_10	99.4242002614712	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTTAATTTTCTTT	NA	False	NA	0	True	NA	NA	NA	73067437	73057519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066196_73066454_73066559_73066671_73066804_73066971_73067140_73067215
m54284U_201016_223608/125633388/ccs	chr2	-	177	1	Intergenic	novelGene_1179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAAAGGCTTAACTTAC	7684	False	NA	NA	False	NA	NA	NA	156172552	156172375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156172400_156172600
m54284U_201016_223608/125766284/ccs	chr10	-	1982	7	NIC	ENSMUSG00000035890.10	novel	1408	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	909	junction_4	89.7552226892675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCATGGCTTGGCGTC	NA	False	NA	-7	True	AATACA	-16	NA	79602744	79594375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79595071_79596624_79596741_79596822_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
m54284U_201016_223608/125766335/ccs	chr9	+	1807	9	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-628	-1824	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	94.0634759085587	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATATTTCAGTATACT	NA	False	NA	NA	False	NA	NA	NA	110782238	110811310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_110782345_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
m54284U_201016_223608/125830339/ccs	chr17	+	3444	7	NNC	ENSMUSG00000038141.12	novel	4499	17	NA	NA	3093	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	397.7376647993	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6350970	6358589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_6351074_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
m54284U_201016_223608/125830460/ccs	chr1	+	3303	13	NIC	ENSMUSG00000116048.2	novel	3267	13	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	276.106398070663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406742	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_93406903_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
m54284U_201016_223608/125830688/ccs	chr9	-	4440	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	86.1012692788473	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTTGTGTTTCATAA	2246	False	NA	-19	True	AATAAA	-15	NA	70411007	70332711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383180_70383531_70383951_70410740
m54284U_201016_223608/12584436/ccs	chr11	-	3148	13	NNC	ENSMUSG00000078622.9	novel	5193	13	NA	NA	-463	1425	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_12	175.732336713158	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGCTGCTTTGACTT	NA	False	NA	-4	True	ATTAAA	-14	NA	106107633	106090179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106107536
m54284U_201016_223608/125894731/ccs	chr6	+	4925	24	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	279	junction_1	39.2537188345773	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1739	False	NA	28	True	AATAAA	-30	NA	65019604	65093045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
m54284U_201016_223608/126026875/ccs	chr9	+	2449	13	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	0	117	intron_retention	FALSE	canonical	3	619	junction_7	52.7680985276353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184490	46192899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
m54284U_201016_223608/126027088/ccs	chr3	+	5499	11	NIC	ENSMUSG00000025764.15	novel	4790	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	239.579402286591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41519332	41571293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_41519446_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
m54284U_201016_223608/126091655/ccs	chr7	+	2374	5	NIC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	-2179	719	combination_of_known_junctions	FALSE	canonical	3	87	junction_4	746.226967818773	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCGTTCTCCCTTCCCC	220	False	NA	NA	False	NA	NA	NA	5068047	5072314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5071731
m54284U_201016_223608/126159077/ccs	chr13	-	166	1	Intergenic	novelGene_6984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAATAAAATAT	NA	False	NA	NA	False	NA	NA	NA	20419714	20419548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_20419500_20419700
m54284U_201016_223608/126222865/ccs	chr17	-	2407	8	NIC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	67.8948767265564	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAGGGCCTCTCAAAT	NA	False	NA	-4	True	AATAAA	-31	NA	47813212	47799206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_47800822_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
m54284U_201016_223608/126224026/ccs	chr6	-	1759	8	NNC	ENSMUSG00000030101.16	novel	452	2	NA	NA	0	1936	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	32.630898090676	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGGTCTTTGCTGATC	2498	False	NA	NA	False	AATAAA	-31	NA	108162517	108119337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_108120149_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
m54284U_201016_223608/126288556/ccs	chr8	+	4493	31	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	24.2166379903478	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567644	86787270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_86567733_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
m54284U_201016_223608/126353903/ccs	chr4	-	139	1	Intergenic	novelGene_2430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1003	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCTTGCTGTTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	155714531	155714392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155714400_155714500
m54284U_201016_223608/126419714/ccs	chr8	-	2429	6	ISM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	-74	1993	-74	-1990	5prime_fragment	FALSE	canonical	3	36	junction_5	46.6218832738447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGCCTCATCTTGAAC	NA	False	NA	NA	False	ATTAAA	-15	NA	112470515	112439098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
m54284U_201016_223608/126421110/ccs	chr19	-	7087	35	NNC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_25	25.2079242772344	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738723	5714662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734494_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
m54284U_201016_223608/126421745/ccs	chr2	+	3191	7	NIC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	326	junction_4	29.4938788376315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112148	127140852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132961_127134070_127134171_127137403_127137489_127139026
m54284U_201016_223608/126550226/ccs	chr1	+	2231	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	620.253697198887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724161	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731635_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
m54284U_201016_223608/126550584/ccs	chrX	+	5482	7	NIC	ENSMUSG00000025860.16	novel	6542	8	NA	NA	72	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	42.5535610208541	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTATCTTCTTTGTAT	NA	False	NA	18	True	AATAAA	-14	NA	41156866	41198533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_41156934_41157233_41157360_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
m54284U_201016_223608/126551133/ccs	chr17	+	3498	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	539.303830038087	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	499	False	NA	36	True	AATAAA	-20	NA	56610399	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201016_223608/126551769/ccs	chr5	-	195	1	Intergenic	novelGene_2460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCCGTACACTTGAACTCA	8425	False	NA	NA	False	NA	NA	NA	9153302	9153107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_9153100_9153300
m54284U_201016_223608/126616434/ccs	chr12	+	193	1	Intergenic	novelGene_6783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGTTAGTTACCGCA	1110	False	NA	NA	False	NA	NA	NA	83633696	83633889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_83633700_83633900
m54284U_201016_223608/126616570/ccs	chr5	-	4150	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_14	184.506416148599	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201016_223608/126616725/ccs	chr12	+	4801	17	NIC	ENSMUSG00000007411.17	novel	3365	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	329	junction_16	61.8801449881139	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	736	False	NA	NA	False	ATTAAA	-21	NA	111540956	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111619869_111621703
m54284U_201016_223608/126616835/ccs	chr9	-	3922	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	359	junction_14	154.606683771002	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526585	108480145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108526427
m54284U_201016_223608/126681208/ccs	chr2	+	5365	23	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	70.0875632971044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	1678	False	NA	17	True	AATAAA	-21	NA	5956279	6061514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_5956365_5957238_5957433_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319_6056441_6060243
m54284U_201016_223608/126814697/ccs	chr16	-	1826	15	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	0	113	combination_of_known_junctions	FALSE	canonical	3	4	junction_14	1300.67884355887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292592	87280762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292466
m54284U_201016_223608/126877791/ccs	chrX	+	177	1	Intergenic	novelGene_9537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGATCCTGGGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	93176857	93177034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_93176900_93177000
m54284U_201016_223608/126878367/ccs	chr11	+	2361	11	NIC	ENSMUSG00000041958.11	novel	2501	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	151.766300607216	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCATAACTCGTTCTTGT	NA	False	NA	28	True	NA	NA	NA	78219240	78233608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78219335_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
m54284U_201016_223608/126880245/ccs	chr9	+	1582	15	NNC	ENSMUSG00000041506.16	novel	1586	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	352.458189733483	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	False	NA	23	True	ATTAAA	-23	NA	106354467	106362623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_106354634_106354873_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
m54284U_201016_223608/126880258/ccs	chr1	+	3694	3	NIC	ENSMUSG00000063659.12	novel	646	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGCTTTTTGTA	NA	False	NA	7	True	AATAAA	-17	NA	177270031	177278330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_177270162_177274654_177275343_177275454
m54284U_201016_223608/126944326/ccs	chr12	-	184	1	Intergenic	novelGene_6748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGAGATGCAGCTCAGC	NA	False	NA	NA	False	NA	NA	NA	79373143	79372959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_79373000_79373100
m54284U_201016_223608/127010726/ccs	chr14	+	3803	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	134	junction_15	101.735663996062	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923905	32019177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_31924143_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
m54284U_201016_223608/127141189/ccs	chr8	-	3741	1	Intergenic	novelGene_4618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	129476789	129473048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_129473000_129476800
m54284U_201016_223608/127142226/ccs	chr1	-	1931	1	Antisense	novelGene_ENSMUSG00000026275.14_AS_novelGene_ENSMUSG00000106302.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93274665	93272734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_93272700_93274700
m54284U_201016_223608/127206431/ccs	chr1	+	4886	9	NNC	ENSMUSG00000026039.10	novel	4939	9	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_3	31.5584774664432	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTATCTATTTATTTA	5192	False	NA	15	True	ATTAAA	-19	NA	58035182	58065058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058906_58063946
m54284U_201016_223608/127207013/ccs	chr2	+	2651	6	NIC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	72.2744768227346	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7302	False	NA	14	True	ATTAAA	-19	NA	131076024	131089945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_131076048_131080655_131080831_131083799_131083970_131085038_131085193_131087122_131087590_131088283
m54284U_201016_223608/127270940/ccs	chr1	-	5177	1	NIC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	0	-1069	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	134289691	134284514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_134284500_134289700
m54284U_201016_223608/127337631/ccs	chr2	+	168	1	Intergenic	novelGene_1291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAGAGAGAGAGAGTAGAGA	NA	False	NA	NA	False	NA	NA	NA	172880642	172880810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_172880600_172880800
m54284U_201016_223608/127338354/ccs	chr11	+	1655	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-809	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	1010.03465287088	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206682	97219937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217433_97217758_97218911_97219086_97219307
m54284U_201016_223608/127402124/ccs	chr5	+	2140	1	Antisense	novelGene_ENSMUSG00000062234.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGTAGGATCTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	108740171	108742311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_108740200_108742300
m54284U_201016_223608/127402992/ccs	chr2	-	626	3	NIC	ENSMUSG00000056436.5	novel	655	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	94.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGCGTTATGTTTATGA	NA	False	NA	1	True	AATAAA	-30	NA	76190794	76184285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_76184581_76186423_76186617_76190656
m54284U_201016_223608/127404041/ccs	chr5	+	2565	13	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	57.0079794609686	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	-4	True	NA	6	True	AATAAA	-22	NA	120649232	120672089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
m54284U_201016_223608/127404137/ccs	chr3	-	2562	5	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	677	junction_3	338.147157314682	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	False	NA	-28	True	NA	NA	NA	90416805	90407001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414_90414934_90416497
m54284U_201016_223608/127468715/ccs	chr5	+	4165	12	NNC	ENSMUSG00000051674.16	novel	4116	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	50.51094309059	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	NA	False	NA	19	True	AATAAA	-30	NA	73648409	73718137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_73648535_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
m54284U_201016_223608/127469872/ccs	chr6	-	3930	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	237	junction_3	17.8941331167509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401893	128386406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128393028_128393219_128393262_128394579_128394676_128401680
m54284U_201016_223608/127533547/ccs	chr7	-	2978	12	NIC	ENSMUSG00000003269.18	novel	1510	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	132.289502216518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATTATTTAATCCCTT	3157	False	NA	NA	False	NA	NA	NA	45463740	45457032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457903_45458153_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
m54284U_201016_223608/127535946/ccs	chr3	+	189	1	Intergenic	novelGene_1670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAACACTCTTTTAGTAT	NA	False	NA	99	True	NA	NA	NA	124180161	124180350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_124180200_124180400
m54284U_201016_223608/127600064/ccs	chr2	+	5693	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_34	202.897936761374	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATGTGGCAACTTTC	4868	False	NA	18	True	ATTAAA	-19	NA	30176428	30234278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229507_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
m54284U_201016_223608/127600669/ccs	chr19	+	1485	9	NIC	ENSMUSG00000024911.8	novel	1209	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	126	junction_5	11.4455231422596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGACTGGTCCTTGTTCCA	NA	False	NA	15	True	AATAAA	-15	NA	5510643	5515077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5514244_5514361_5514460_5514952
m54284U_201016_223608/127666566/ccs	chr5	-	177	1	Intergenic	novelGene_2491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTTTAGCTTGT	NA	False	NA	NA	False	NA	NA	NA	24997202	24997025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_24997000_24997200
m54284U_201016_223608/127730966/ccs	chr16	-	1824	15	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	0	113	combination_of_known_junctions	FALSE	canonical	3	341	junction_3	1215.80900252147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292761	87280762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_87280954_87281691_87281812_87282467_87282612_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
m54284U_201016_223608/127796916/ccs	chr8	+	3543	11	NIC	ENSMUSG00000031684.12	novel	3595	12	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_9	39.4031724611103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCTGGAAATGTCGTGG	NA	False	NA	32	True	ATTAAA	-17	NA	79235974	79460632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79456246_79456393_79458237
m54284U_201016_223608/127797282/ccs	chr11	-	2522	6	NIC	ENSMUSG00000001053.16	novel	2367	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_5	175.389167282361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAGGAATGTTATTC	NA	False	NA	0	True	AATATA	-32	NA	51541669	51533889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51538834_51538990_51541504
m54284U_201016_223608/12780189/ccs	chr6	+	1396	7	NNC	ENSMUSG00000030089.16	novel	2324	10	NA	NA	16185	0	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_6	13.490737563232	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCCTCCATCCTTC	2837	False	NA	NA	False	AATAAA	-17	NA	90612313	90623394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550_90623032_90623053
m54284U_201016_223608/12781786/ccs	chr4	-	3617	10	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	67.8917075246844	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-24	True	NA	-3	True	AATAAA	-25	NA	46138455	46114745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135592_46138379
m54284U_201016_223608/12781869/ccs	chr13	+	1844	11	NNC	ENSMUSG00000021322.9	novel	2921	21	NA	NA	-74227	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_6	9.14549069213894	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTGGGCATAATTGTG	NA	False	NA	23	True	AATAAA	-16	NA	21120575	21208422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_21120623_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21207378
m54284U_201016_223608/12782362/ccs	chr7	-	3878	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	232	junction_7	20.8868379607829	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9941	False	NA	-3	True	AATAAA	-17	NA	4504679	4484518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
m54284U_201016_223608/127862178/ccs	chr1	-	3351	13	ISM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	-43	8095	0	7903	5prime_fragment	FALSE	canonical	3	234	junction_5	31.6503247306494	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAACTGCTGTCTGTTTC	NA	False	NA	-4	True	AATAAA	-13	NA	33853651	33808720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
m54284U_201016_223608/127926608/ccs	chr10	+	192	1	Intergenic	novelGene_5279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAAAGATCTGCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	42318487	42318679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_42318500_42318700
m54284U_201016_223608/127927851/ccs	chrX	-	719	3	NNC	ENSMUSG00000015289.5	novel	761	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	696.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	4493	False	NA	-19	True	AATAAA	-29	NA	73397224	73395767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_73396105_73396520_73396609_73396930
m54284U_201016_223608/127928842/ccs	chr19	-	1865	1	Genic_Genomic	ENSMUSG00000034371.10	novel	NA	NA	NA	NA	15204	601	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10566418	10564553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_10564600_10566400
m54284U_201016_223608/127993412/ccs	chr14	+	6773	19	NIC	ENSMUSG00000007817.16	novel	930	5	NA	NA	96	-141	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	14.544949486181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGTGTTCATGTGGTT	410	False	NA	13	True	AATAAA	-24	NA	25608357	25667026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_25608637_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
m54284U_201016_223608/127994439/ccs	chr15	-	2446	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_3	447.246748809857	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432145	98416700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
m54284U_201016_223608/128058183/ccs	chr7	-	2612	23	NNC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_12	411.870860066479	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153827	143111442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143124700_143124816_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
m54284U_201016_223608/128059069/ccs	chr11	-	2790	5	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	254	junction_4	31.693847983481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734116	116728257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116728590_116729815_116731372_116731894_116732182_116733157_116733547_116733890
m54284U_201016_223608/128059147/ccs	chr13	+	217	1	Intergenic	novelGene_7088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	7824	False	NA	NA	False	AATAAA	-38	NA	55198281	55198498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55198300_55198500
m54284U_201016_223608/128190813/ccs	chr6	+	3177	13	NNC	ENSMUSG00000030134.12	novel	2227	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_11	9.46484724300046	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTCTCTCTCTCT	NA	False	NA	3	True	NA	NA	NA	118043379	118068507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_118043424_118057318_118057523_118059974_118060098_118061381_118061520_118062224_118062447_118062733_118062809_118063177_118063271_118063987_118064091_118064167_118064248_118065069_118065262_118066063_118066188_118066420_118066469_118066776
m54284U_201016_223608/128190925/ccs	chr13	-	2498	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	40	junction_1	488.277496491746	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259677	47238257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_47239556_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
m54284U_201016_223608/128321566/ccs	chr10	+	4986	1	FSM	ENSMUSG00000053830.5	ENSMUST00000217785.2	1836	1	-102	-3048	-102	3048	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTAGCTTCCTAGTGGG	NA	False	NA	NA	False	TATAAA	-35	NA	72145048	72150034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_72145000_72150000
m54284U_201016_223608/128387078/ccs	chr9	-	1944	12	NIC	ENSMUSG00000090626.10	novel	2054	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_5	58.5026664646243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTGGTGAAATAAACAGA	7876	False	NA	-32	True	AATAAA	-14	NA	72399243	72368384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
m54284U_201016_223608/128387785/ccs	chr11	+	187	1	Intergenic	novelGene_5663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATGTTCAGAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	4468439	4468626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4468400_4468600
m54284U_201016_223608/128452614/ccs	chr8	+	2465	4	NIC	ENSMUSG00000026317.8	novel	6857	3	NA	NA	-150	2880	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	81.7897032367495	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAGGTATGATGCCTAT	NA	False	NA	10	True	TATAAA	-18	NA	14938853	14947939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_14939119_14940491_14940624_14944571_14945231_14946530
m54284U_201016_223608/12845671/ccs	chr5	+	1389	8	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	791.240204504605	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377872	38391650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_38377980_38381970_38382142_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
m54284U_201016_223608/128518661/ccs	chr15	-	219	1	ISM	ENSMUSG00000033228.9	ENSMUST00000227133.2	2599	2	10576	266	-3652	-266	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATTTCATTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	96348105	96347886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_96347900_96348100
m54284U_201016_223608/128581714/ccs	chr10	+	2677	10	NIC	ENSMUSG00000019794.14	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	353	junction_4	22.572243416185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTTCAATTTAGCAC	NA	False	NA	9	True	AATAAA	-18	NA	7601771	7638913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7636634_7637006_7637134_7638553
m54284U_201016_223608/128581815/ccs	chr8	+	4461	35	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	70.8391130011934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3565410	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_3565557_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
m54284U_201016_223608/128582706/ccs	chr14	-	5676	8	NIC	ENSMUSG00000021273.12	novel	2860	8	NA	NA	0	-1252	intron_retention	FALSE	canonical	2	3	junction_5	299.978978855356	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTCCTTGTCTTTCTC	4307	False	NA	-36	True	AATAGA	-11	NA	63415246	63383853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63396686_63400935_63401980_63402079_63415131
m54284U_201016_223608/128583008/ccs	chr6	-	193	1	Intergenic	novelGene_3434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAAACCAGGTCAGAAGA	9470	False	NA	NA	False	NA	NA	NA	116047418	116047225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_116047200_116047400
m54284U_201016_223608/128715598/ccs	chr7	+	2726	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.8262979824561	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1308	False	NA	21	True	AATAAA	-15	NA	5083233	5101177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_5083638_5085016_5085121_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
m54284U_201016_223608/128778590/ccs	chr3	-	1752	8	NIC	ENSMUSG00000042642.14	novel	3007	9	NA	NA	0	-415	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	105.155666921542	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3737	False	NA	-15	True	AGTAAA	-18	NA	89319177	89310388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319124
m54284U_201016_223608/128779986/ccs	chr7	+	1002	5	NIC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	147.438758472798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	19	True	AATAAA	-16	NA	139616324	139620515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_139616520_139617132_139617335_139617428_139617554_139619238_139619359_139620155
m54284U_201016_223608/128845438/ccs	chr3	-	1744	8	NNC	ENSMUSG00000004896.17	novel	2492	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	32.1666578548506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9443	False	NA	-22	True	TATAAA	-27	NA	87837451	87830964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
m54284U_201016_223608/128846448/ccs	chr14	+	959	2	Intergenic	novelGene_7405	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGCAAGAATGTGTT	8838	False	NA	NA	False	AATAAA	-16	NA	41146716	41148274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_41146812_41147410
m54284U_201016_223608/128911173/ccs	chr4	-	4338	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	0	-2205	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	122.196055718087	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	4	True	NA	1	True	AATAAA	-22	NA	9669086	9451283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
m54284U_201016_223608/128976612/ccs	chr11	+	2913	10	NIC	ENSMUSG00000059248.14	novel	647	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	178.114819397177	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117198979	117253139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_117199098_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
m54284U_201016_223608/129106197/ccs	chr6	-	184	1	Antisense	novelGene_ENSMUSG00000097048.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTAACTTGTAAAGGT	NA	False	NA	NA	False	NA	NA	NA	86558507	86558323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_86558300_86558500
m54284U_201016_223608/129106563/ccs	chr10	+	4385	21	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_14	130.463203624624	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235753	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201016_223608/129107373/ccs	chr16	-	160	1	Intergenic	novelGene_8180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAATCAATCAATCAAT	NA	False	NA	NA	False	NA	NA	NA	30215171	30215011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_30215000_30215200
m54284U_201016_223608/129107702/ccs	chr9	+	4501	20	NIC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	52.9521291152616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTTGATAAGATACCG	NA	False	NA	15	True	AATAAA	-16	NA	61279664	61325119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
m54284U_201016_223608/12911342/ccs	chr5	-	2058	13	ISM	ENSMUSG00000029471.14	ENSMUST00000199830.5	3139	14	-10	2732	0	-2732	5prime_fragment	FALSE	canonical	3	28	junction_4	15.8190725251374	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGGAATGTCACTCAGT	4623	False	NA	-22	True	AATAAA	-16	NA	122917472	122881413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
m54284U_201016_223608/12913250/ccs	chr11	+	2071	7	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	581	junction_1	38.2262998470948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936496	68942490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939471_68939556_68939706_68941127_68941303_68941725
m54284U_201016_223608/129174349/ccs	chr7	-	3789	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_10	1322.53667310237	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676040_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201016_223608/129303142/ccs	chr14	+	7316	24	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_23	68.3154033064469	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8928	False	NA	16	True	AATAAA	-20	NA	27150790	27205512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
m54284U_201016_223608/129303821/ccs	chrX	-	1480	12	NNC	ENSMUSG00000002012.14	novel	1532	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	20.4110648974504	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGGTGCTGAACTGGG	NA	False	NA	-2	True	AATAAA	-15	NA	72703723	72699599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_72699940_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703624
m54284U_201016_223608/129304065/ccs	chr6	+	127	1	Intergenic	novelGene_3371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGAAAGTTAAAAAACAAA	3784	False	NA	31	True	AATAAA	-16	NA	86543494	86543621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_86543500_86543600
m54284U_201016_223608/129305356/ccs	chr7	+	3149	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	482	junction_4	87.0195849407782	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138476014_138478184_138478447_138483937
m54284U_201016_223608/129370743/ccs	chrM	+	163	1	Intergenic	novelGene_9743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		-1	True	NA	NA	False	AATAAA	-10	NA	16136	16299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrM_+_16100_16300
m54284U_201016_223608/129435574/ccs	chr2	-	3065	10	NNC	ENSMUSG00000056941.18	novel	1343	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_1	54.2909400622195	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTATGGGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-14	NA	153474660	153458852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_153460241_153460344_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
m54284U_201016_223608/129566913/ccs	chr10	+	2946	7	Fusion	ENSMUSG00000078427.4_ENSMUSG00000025354.6	novel	427	7	NA	NA	-558	649	multi-exon	FALSE	canonical	3	6	junction_1	135.15299972007	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTTCCTTCTCTTCTTT	3458	False	NA	NA	False	TATAAA	-18	NA	128640864	128654021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr10_+_128640915_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
m54284U_201016_223608/129630899/ccs	chr17	+	2427	7	NNC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	414.185948578655	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53786261	53814708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_53786637_53790247_53790309_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
m54284U_201016_223608/129696994/ccs	chr9	+	6285	36	NIC	ENSMUSG00000033392.17	novel	2727	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_24	28.274947445773	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAGACCTTAACTATG	NA	False	NA	15	True	AATAAA	-16	NA	113570540	113748750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
m54284U_201016_223608/129762156/ccs	chr4	+	3830	25	NNC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-3135	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_23	6.67382428264002	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	1488	False	NA	9	True	AATAAA	-15	NA	129900533	129916426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915358_129915455_129915942
m54284U_201016_223608/129762899/ccs	chr1	-	5032	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	12	junction_15	59.8130673396263	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168743	38091876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
m54284U_201016_223608/12978052/ccs	chr13	+	1051	1	FSM	ENSMUSG00002075877.1	ENSMUST00020183356.1	84	1	0	-967	0	967	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGAGATCTCGCAGGT	NA	False	NA	NA	False	AATAAA	-42	NA	81213595	81214646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_81213600_81214600
m54284U_201016_223608/129826977/ccs	chr16	+	6039	17	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	399	junction_7	25.2140059044571	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8020	False	NA	14	True	AATAAA	-15	NA	32427800	32451608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
m54284U_201016_223608/129827662/ccs	chr4	+	2506	8	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_4	68.9610952136146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8271	False	NA	22	True	NA	NA	NA	156194454	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208580_156209873
m54284U_201016_223608/129828971/ccs	chr10	+	3769	1	Intergenic	novelGene_5187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCATCAGGAGGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	7560862	7564631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_7560900_7564600
m54284U_201016_223608/130024264/ccs	chr7	+	1249	11	NIC	ENSMUSG00000030714.15	novel	1312	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	179.607043291737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTCCTGGGCCTCAC	114	False	NA	33	True	AATAAA	-16	NA	126248483	126271951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_126248650_126260223_126260321_126261737_126261824_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
m54284U_201016_223608/130090358/ccs	chr1	-	4209	16	NNC	ENSMUSG00000026028.13	novel	6189	16	NA	NA	-53	1028	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	13.2839083940767	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTTGCTTTGAAAGTGT	1494	False	NA	NA	False	ATTAAA	-23	NA	59012642	58941634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_58943342_58945864_58945971_58947687_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
m54284U_201016_223608/130155670/ccs	chr3	+	3134	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	119.346079476414	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201016_223608/130220769/ccs	chr11	-	4059	16	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	189	junction_1	103.515409480908	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201016_223608/130221586/ccs	chr17	+	1231	7	NNC	ENSMUSG00000007039.13	novel	1254	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	162.253659434849	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	17	True	AATAAA	-23	NA	35278076	35281071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280500_35280602_35280766
m54284U_201016_223608/130287241/ccs	chr5	+	5399	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	31.4394642018125	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2013	False	NA	7	True	AATAAA	-8	NA	33021064	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
m54284U_201016_223608/130288358/ccs	chr13	-	2646	15	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_11	1885.34713958324	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4751	False	NA	-23	True	AATAAA	-15	NA	58550330	58539052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
m54284U_201016_223608/130351358/ccs	chr13	+	3587	4	NNC	ENSMUSG00000035367.10	novel	2447	4	NA	NA	-81	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	169.267703817224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCGTGGTCATGGTGTC	NA	False	NA	9	True	NA	NA	NA	58550432	58558962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_58550604_58552381_58552470_58554815_58554905_58555723
m54284U_201016_223608/130353307/ccs	chr4	-	183	1	Intergenic	novelGene_2090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGCCAGGGATGGTG	NA	False	NA	NA	False	NA	NA	NA	123650525	123650342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_123650300_123650500
m54284U_201016_223608/13044174/ccs	chr2	-	2220	11	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_10	221.250536722513	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174332	152158253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173022_152173953
m54284U_201016_223608/130613700/ccs	chr15	-	2167	3	Intergenic	novelGene_7725	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAATTTATTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	57840677	57837903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_57839652_57839752_57840113_57840618
m54284U_201016_223608/130680394/ccs	chr13	-	3026	14	NIC	ENSMUSG00000021629.11	novel	3179	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	72.6867315728638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGCAAATGAATAATT	NA	False	NA	-4	True	AATAAA	-19	NA	100969935	100939155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100965407_100965531_100969608
m54284U_201016_223608/130681638/ccs	chr18	+	4063	5	NIC	ENSMUSG00000024594.10	novel	523	5	NA	NA	0	-234	combination_of_known_junctions	FALSE	canonical	3	294	junction_1	276.069284781918	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-38	NA	57506963	57525791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_57507156_57507598_57507763_57514699_57514804_57517245_57517349_57522291
m54284U_201016_223608/130744734/ccs	chr17	+	1694	2	Antisense	novelGene_ENSMUSG00000097624.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGGTCATTCATTG	NA	False	NA	8	True	NA	NA	NA	15461238	15463987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_15461391_15462445
m54284U_201016_223608/130746383/ccs	chr5	+	3287	14	NNC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	93.7481202967377	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7146	False	NA	16	True	AATAAA	-17	NA	31609778	31639098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627713_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
m54284U_201016_223608/130812645/ccs	chr15	-	1422	13	NNC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	764.753496050997	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43128938_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
m54284U_201016_223608/130812696/ccs	chr11	+	1345	8	NIC	ENSMUSG00000018411.18	novel	1527	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	225.97661067338	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGAAAAAAAAACATGTA	NA	False	NA	5	True	AATAAA	-9	NA	104122309	104219261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_104122434_104173193_104173307_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
m54284U_201016_223608/130878101/ccs	chr17	-	4714	5	NIC	ENSMUSG00000024018.19	novel	7117	5	NA	NA	0	1598	intron_retention	FALSE	canonical	3	10	junction_1	117.737791299141	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTAATTGTGACTGAAC	NA	False	NA	NA	False	AATAAA	-17	NA	29935982	29914950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_29919227_29923228_29923444_29924244_29924298_29924462_29924558_29935907
m54284U_201016_223608/130941053/ccs	chr4	-	2681	12	NNC	ENSMUSG00000029026.18	novel	4752	12	NA	NA	3214	229	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	4.45918126124753	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGGGGTCAGCTTG	NA	False	NA	-3	True	GATAAA	-14	NA	154166565	154142739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_154143784_154145044_154145139_154145818_154145958_154146409_154146559_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154166326
m54284U_201016_223608/130941550/ccs	chr19	+	4368	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1016	junction_10	59.0680962957162	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245643	7252590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7250543_7251197_7251256_7251384_7251615_7251707
m54284U_201016_223608/130942978/ccs	chrX	+	4242	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	211.034357392345	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350738_158350792_158350914_158351011_158357940_158358094_158375066
m54284U_201016_223608/131007169/ccs	chr16	+	4650	10	NNC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	180.387100904803	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84631812	84660667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641239_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
m54284U_201016_223608/131008965/ccs	chr15	-	1710	2	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCCAGCTTAAGTCTCT	245	False	NA	NA	False	AATAAA	-20	NA	83251483	83241734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_83243152_83251190
m54284U_201016_223608/131137666/ccs	chr1	+	2687	16	NIC	ENSMUSG00000026342.11	novel	756	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	24.987107786928	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCTTAAGCGATGACAT	NA	False	NA	NA	False	TTTAAA	-41	NA	125488331	125523557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_125488555_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
m54284U_201016_223608/131138841/ccs	chr3	+	2665	17	NIC	ENSMUSG00000027668.14	novel	4562	18	NA	NA	68	328	combination_of_known_splicesites	FALSE	canonical	3	7	junction_15	132.514135448827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTATCATTGTAGCCAC	NA	False	NA	24	True	ATTAAA	-21	NA	32583755	32631830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32628382_32628518_32631211
m54284U_201016_223608/131203244/ccs	chr11	-	1079	4	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	657	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	12.9614813968157	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTCTGTCTGCCTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	83473161	83465486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83473098
m54284U_201016_223608/131204280/ccs	chr10	-	1500	8	NIC	ENSMUSG00000035890.10	novel	1408	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	357.615915273835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCATGGCTTGGCGTC	NA	False	NA	-7	True	AATACA	-16	NA	79602744	79594375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
m54284U_201016_223608/131205508/ccs	chrX	+	3305	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	196.729703880448	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158374327_158374354_158375066
m54284U_201016_223608/131270181/ccs	chr4	-	2720	6	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	226.835094286576	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726970	147696395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147706414_147706543_147725368_147725463_147726791
m54284U_201016_223608/131271206/ccs	chr4	-	2006	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	293	junction_5	37.4985184892535	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9092	False	NA	NA	False	AATAAA	-14	NA	155976226	155973318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155973626_155973890_155974054_155974125_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
m54284U_201016_223608/131402472/ccs	chr6	-	2038	8	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	1423.55806029133	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8571	False	NA	-24	True	AATAAA	-16	NA	145021824	144944883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144993017_144993090_145021614
m54284U_201016_223608/131402509/ccs	chr17	+	2794	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_2	441.748341183955	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87980235_87985635_87985791_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
m54284U_201016_223608/131466512/ccs	chr11	-	4546	5	NNC	ENSMUSG00000038615.18	novel	4596	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_4	636.545560034786	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720328	96708256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96718023_96719050_96720236
m54284U_201016_223608/131467856/ccs	chr2	+	2941	7	NNC	ENSMUSG00000037523.14	novel	887	4	NA	NA	-1307	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	67.1004636513208	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	5953	False	NA	14	True	ATTAAA	-19	NA	131074675	131089945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_131074811_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
m54284U_201016_223608/131468017/ccs	chr12	+	168	1	Intergenic	novelGene_6770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAATAATTAGCT	NA	False	NA	NA	False	NA	NA	NA	81588841	81589009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_81588800_81589000
m54284U_201016_223608/131531616/ccs	chr11	+	3751	26	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_23	246.576125364967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
m54284U_201016_223608/131531648/ccs	chr4	-	3211	15	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	262	481	combination_of_known_splicesites	FALSE	canonical	3	9	junction_7	22.6805679661094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	14	True	NA	NA	False	NA	NA	NA	59438371	59314201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
m54284U_201016_223608/131728005/ccs	chr7	+	3813	11	NNC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	0	1035	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	39.6359685134601	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGGTGGTCAATGCATT	NA	False	NA	4	True	AATAAA	-15	NA	132532870	132586760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_132533275_132549772_132549938_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
m54284U_201016_223608/131925266/ccs	chr1	+	1787	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_1	75.8797934601535	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGACTCCTACTTGCGC	NA	False	NA	18	True	AATAAA	-22	NA	75412625	75419823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75412957_75413427_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
m54284U_201016_223608/131989702/ccs	chr7	+	2106	17	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	91.6639369858725	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTCTCTTAGGAGAC	NA	False	NA	9	True	AATAAA	-21	NA	24246622	24272865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265816_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
m54284U_201016_223608/131991667/ccs	chr10	+	208	1	Intergenic	novelGene_5274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAGAGGATAAAAAGCCA	NA	False	NA	NA	False	NA	NA	NA	40325077	40325285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_40325100_40325300
m54284U_201016_223608/132057536/ccs	chr16	+	3044	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	intron_retention	FALSE	canonical	3	2657	junction_7	160.083651601917	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
m54284U_201016_223608/132057820/ccs	chr2	+	347	4	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.688048003968	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135488443	135493983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_135488469_135490846_135490892_135493417_135493478_135493766
m54284U_201016_223608/132078/ccs	chr8	+	189	1	Intergenic	novelGene_4196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGATATCATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11531297	11531486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_11531300_11531500
m54284U_201016_223608/132122294/ccs	chr15	-	2463	10	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	176.454869549283	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8083	False	NA	-4	True	AATAAA	-24	NA	79326273	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79303143_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
m54284U_201016_223608/132188647/ccs	chr16	-	3868	4	ISM	ENSMUSG00000040820.17	ENSMUST00000226776.2	3388	6	-16	35393	0	-35393	5prime_fragment	FALSE	canonical	3	38	junction_3	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGCTTCCTCTGCTCA	NA	False	NA	NA	False	AATAAA	-14	NA	94091145	94065820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_-_94069167_94069394_94069558_94088650_94088786_94090921
m54284U_201016_223608/132188970/ccs	chr7	+	2339	10	NNC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	264.47422801466	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_4743239_4743684_4743818_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
m54284U_201016_223608/132253445/ccs	chr2	-	2740	12	NIC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	539	junction_6	53.4874666712595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101393	25089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
m54284U_201016_223608/132253962/ccs	chr10	+	2669	8	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	598.725721675559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516108	61529076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525390_61525467_61525552_61525685_61527063
m54284U_201016_223608/132318835/ccs	chr2	+	1217	5	NIC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	2580	junction_4	1523.82780769351	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5802	False	NA	24	True	AATAAA	-23	NA	32851731	32854057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853866_32854002
m54284U_201016_223608/132318994/ccs	chr7	-	1599	11	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	165	junction_9	1344.93463038171	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	False	NA	-36	True	AATAAA	-11	NA	44635780	44626187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633558_44635706
m54284U_201016_223608/13241034/ccs	chr17	+	183	1	Intergenic	novelGene_8566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATATCTAATTAGTATTT	4464	False	NA	14	True	NA	NA	NA	35846349	35846532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35846300_35846500
m54284U_201016_223608/132450667/ccs	chr3	-	194	1	Antisense	novelGene_ENSMUSG00000008958.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAAAGGAACAGAAACTCT	1347	False	NA	NA	False	NA	NA	NA	95024009	95023815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_-_95023800_95024000
m54284U_201016_223608/132450720/ccs	chr14	+	3484	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_25	108.5905631259	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640153	56726892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724513_56726767
m54284U_201016_223608/132515358/ccs	chr4	+	1108	9	NNC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	0	358	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	796.449582522334	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGATACTCTTGGGTTA	NA	False	NA	14	True	AATAAA	-14	NA	118478044	118483173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_118478195_118478278_118478360_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
m54284U_201016_223608/132580302/ccs	chr2	+	5816	18	NIC	ENSMUSG00000014353.16	novel	2100	19	NA	NA	0	0	intron_retention	FALSE	canonical	1	36	junction_11	25.8501136110158	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTCCTGGGATTATC	NA	False	NA	9	True	AATAAA	-20	NA	128660222	128696181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128688720_128690924_128690978_128692223_128692255_128693203
m54284U_201016_223608/132581879/ccs	chr10	+	1389	1	Antisense	novelGene_ENSMUSG00000020086.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTAGCATTGAGCGAA	NA	False	NA	NA	False	NA	NA	NA	61619212	61620601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_61619200_61620600
m54284U_201016_223608/132647432/ccs	chr6	+	191	1	Intergenic	novelGene_3146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCAGTCGACTGATAGTC	NA	False	NA	NA	False	NA	NA	NA	30038747	30038938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_30038700_30038900
m54284U_201016_223608/132778033/ccs	chr5	-	1058	7	ISM	ENSMUSG00000029718.15	ENSMUST00000054564.13	1585	10	2707	-3	-477	0	3prime_fragment	FALSE	canonical	3	52	junction_6	194.602729226037	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	6841	False	NA	-4	True	AATAAA	-19	NA	137606931	137603366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137606878
m54284U_201016_223608/132778282/ccs	chr4	-	3863	18	NIC	ENSMUSG00000036940.16	novel	3008	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	907	junction_16	212.667715211843	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTAATTGTGTGTG	NA	False	NA	-9	True	AATAAA	-26	NA	136330034	136277854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136301415_136304381_136304516_136320275_136320442_136329542
m54284U_201016_223608/132844113/ccs	chr9	-	3083	7	NIC	ENSMUSG00000057367.13	novel	3331	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	57.8234861933761	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGATGTGATTCATGAGA	-27	True	NA	-1	True	AATAAA	-21	NA	7837065	7818227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_7818945_7819021_7819064_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
m54284U_201016_223608/132972994/ccs	chr7	-	173	1	Intergenic	novelGene_4105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAACTGGAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	127429548	127429375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127429400_127429500
m54284U_201016_223608/133040061/ccs	chr16	+	6247	36	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	31.5407866815302	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTTCACTGTCGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	94171625	94270079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_94171721_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
m54284U_201016_223608/133040770/ccs	chr7	-	157	1	Intergenic	novelGene_3723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTACCAGTGAAG	NA	False	NA	-7	True	AATAAA	-15	NA	27080589	27080432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_27080400_27080600
m54284U_201016_223608/13306668/ccs	chr18	-	176	1	Intergenic	novelGene_8989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	65621450	65621274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_65621300_65621400
m54284U_201016_223608/133105136/ccs	chr11	+	2485	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_1	25.5477494116409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992534	103003026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102992615_102993507_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
m54284U_201016_223608/133171258/ccs	chr2	+	2921	7	NIC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	3891	junction_1	4810.34778426213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29956467	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959644_29960196_29960368_29960452_29960600_29960930
m54284U_201016_223608/133236981/ccs	chr8	-	3570	11	NIC	ENSMUSG00000039633.8	novel	3930	12	NA	NA	210	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	33.7971892322424	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCCCCCCCCTTTAAAT	NA	False	NA	-2	True	AATAAA	-15	NA	36716460	36683217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36701053_36701177_36703142_36703262_36715720
m54284U_201016_223608/133237082/ccs	chr13	+	752	5	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	20990	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	41.8090899207337	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGTGTATAGTCTCATA	5534	False	NA	NA	False	NA	NA	NA	66711973	66744965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66744311_66744439_66744638
m54284U_201016_223608/133300902/ccs	chr2	+	2681	17	NIC	ENSMUSG00000027642.16	novel	2314	17	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	582.937305671673	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121228	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_157121694_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
m54284U_201016_223608/133301790/ccs	chr5	-	2147	10	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	114.615083143322	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACTTGATCATTTCTT	NA	False	NA	4	True	AATAAA	-42	NA	134205613	134176892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134177846_134182962_134183049_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
m54284U_201016_223608/133497651/ccs	chr17	-	3373	7	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	274	1843	multi-exon	FALSE	canonical	3	13	junction_4	77.3665517735755	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37299663	37278243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr17_-_37280210_37280331_37280614_37281212_37281462_37281732_37281958_37298307_37298416_37298546_37298823_37299396
m54284U_201016_223608/133563019/ccs	chr18	+	991	6	NIC	ENSMUSG00000024537.6	novel	1059	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	169.713169789501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGTTTTATCTGGAAAG	NA	False	NA	26	True	AATAAA	-32	NA	67774677	67787232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_67774806_67777378_67777551_67781197_67781317_67781842_67782017_67786222_67786344_67786955
m54284U_201016_223608/133563702/ccs	chr7	-	4341	1	FSM	ENSMUSG00000060860.9	ENSMUST00000206139.2	4093	1	-1235	987	-3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGCCTGAAGTGTC	NA	False	NA	-25	True	AATAAA	-15	NA	4815353	4811012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_4811000_4815400
m54284U_201016_223608/133564754/ccs	chr5	+	142	1	FSM	ENSMUSG00000105031.2	ENSMUST00000199823.2	204	1	163	-101	163	101	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTGGGCTTGGGCTCC	NA	False	NA	32	True	AATAAA	-27	NA	113905346	113905488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_113905300_113905500
m54284U_201016_223608/133628926/ccs	chr4	+	2500	8	NNC	ENSMUSG00000029028.15	novel	3395	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	149.446598202454	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTTGTGAGTGTAATCT	NA	False	NA	40	True	AATAGA	-41	NA	154096259	154105124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104393_154104442
m54284U_201016_223608/133629422/ccs	chr16	+	3310	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	0	-843	combination_of_known_splicesites	FALSE	canonical	1	1	junction_7	219.124510314132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTATTCTGAGCTATAA	NA	False	NA	-5	True	AATAAA	-18	NA	32698182	32728402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32725901
m54284U_201016_223608/133630765/ccs	chr14	+	2102	9	ISM	ENSMUSG00000039599.17	ENSMUST00000225942.2	2151	14	-60	6874	0	115	5prime_fragment	FALSE	canonical	3	87	junction_7	68.9373583407429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTACTTGTCCATGTG	NA	False	NA	NA	False	AATAAA	-22	NA	20398229	20426470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577
m54284U_201016_223608/133694847/ccs	chr11	+	5396	26	NNC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_12	82.5694955779675	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540320	74561673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
m54284U_201016_223608/13370879/ccs	chr9	-	4797	5	NNC	ENSMUSG00000032252.15	novel	4850	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	63.6646487463804	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTGGATATTTCTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	62029892	61964529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_61968318_61975666_61975860_61977296_61977896_61995710_61995802_62029766
m54284U_201016_223608/133824940/ccs	chr6	+	2592	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	270.803413731971	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117502_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
m54284U_201016_223608/133825510/ccs	chr9	-	3960	14	NNC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	32.0279094267565	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGTTCTGTAAAATG	NA	False	NA	0	True	AATAAA	-17	NA	62888165	62785649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_62787936_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
m54284U_201016_223608/133826391/ccs	chr2	+	3027	18	NIC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	0	-624	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	218.393996520653	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2725	False	NA	29	True	AATAAA	-28	NA	152689914	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_152690218_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
m54284U_201016_223608/133892923/ccs	chr8	-	3687	3	NIC	ENSMUSG00000071302.11	novel	1776	5	NA	NA	0	-314	intron_retention	FALSE	canonical	3	10	junction_2	29	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGTAAGGCTGGTTATT	NA	False	NA	NA	False	AATAAA	-11	NA	129960527	129943148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_129946633_129948024_129948086_129960385
m54284U_201016_223608/133956077/ccs	chr16	+	2947	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	356.504442609065	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	NA	False	NA	11	True	AATAAA	-16	NA	48251662	48451263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
m54284U_201016_223608/133956427/ccs	chr5	+	4931	14	NIC	ENSMUSG00000034462.10	novel	5219	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	20.2464110341392	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGGTGTTAAAAACACGT	NA	False	NA	9	True	AATAAA	-15	NA	104607435	104653685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
m54284U_201016_223608/133958372/ccs	chr3	+	3137	27	NNC	ENSMUSG00000027751.14	novel	3753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	128.485425001709	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201016_223608/134022450/ccs	chr2	-	2279	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5293	-53	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_15	28.2830141408035	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCCTCCTGATGAC	NA	False	NA	-5	True	AATAAA	-16	NA	71164477	71105086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164435
m54284U_201016_223608/134087507/ccs	chr7	-	4942	4	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	275.587050171488	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454907	118441444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_118445318_118449843_118449913_118451625_118452564_118454845
m54284U_201016_223608/134089222/ccs	chr15	+	3559	6	NIC	ENSMUSG00000036167.17	novel	1154	8	NA	NA	0	403	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	63.5282614274938	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296230	93389794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93362985_93363127_93386854
m54284U_201016_223608/134218615/ccs	chr4	+	1562	8	NNC	ENSMUSG00000023286.17	novel	3483	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	412.017980586443	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	787	False	NA	37	True	TATAAA	-19	NA	156028317	156042171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039898_156040018_156040824_156040906_156041537
m54284U_201016_223608/134349937/ccs	chr9	-	4356	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	-457	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	79.8840876246409	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2246	False	NA	-1	True	AATAAA	-15	NA	70411007	70333168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
m54284U_201016_223608/134350946/ccs	chr17	+	3474	17	NNC	ENSMUSG00000001228.15	novel	3483	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	655.998856706321	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	499	False	NA	36	True	AATAAA	-20	NA	56610399	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201016_223608/134416183/ccs	chr15	+	2711	16	NIC	ENSMUSG00000054263.13	novel	2844	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_15	8.17964954424495	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATGCGGCACAGGTTAT	NA	False	NA	NA	False	NA	NA	NA	7159047	7214824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7214547
m54284U_201016_223608/134416967/ccs	chr18	+	181	1	Intergenic	novelGene_8828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACATACCAGAAGAG	NA	False	NA	18	True	NA	NA	NA	20144096	20144277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_20144100_20144300
m54284U_201016_223608/134482176/ccs	chr4	-	1864	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127222954	127219027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_127220806_127222868
m54284U_201016_223608/134613767/ccs	chr4	-	3110	15	NNC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	470.819758398009	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117354249	117128660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353875
m54284U_201016_223608/134744919/ccs	chrX	+	2858	6	NNC	ENSMUSG00000000838.18	novel	4058	17	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	346.488325921668	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722292	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_67722474_67731887_67731941_67735106_67735141_67755911_67756020_67756846_67756930_67759170
m54284U_201016_223608/134807933/ccs	chr13	+	3703	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	7	junction_15	87.5608419424269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTCCTAATCCTTAC	NA	False	NA	9	True	AATAAA	-19	NA	94495467	94702825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
m54284U_201016_223608/134940729/ccs	chr17	+	1804	9	NIC	ENSMUSG00000023827.9	novel	967	7	NA	NA	116	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	85.5599205235722	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAGTGTTTACACAA	NA	False	NA	28	True	ATTAAA	-19	NA	12337706	12438532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_12337728_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
m54284U_201016_223608/135070309/ccs	chr9	+	2377	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	217	junction_8	148.387634255689	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9118	False	NA	7	True	NA	NA	NA	15217555	15228274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
m54284U_201016_223608/135070365/ccs	chr2	-	2289	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5252	-53	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_15	22.4311291636323	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCCTCCTGATGAC	NA	False	NA	-5	True	AATAAA	-16	NA	71164436	71105086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71164384
m54284U_201016_223608/135137123/ccs	chr15	+	2498	4	NNC	ENSMUSG00000116114.2	novel	833	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAATATAAAGAATTTCA	923	False	NA	NA	False	AATAAA	-6	NA	101262620	101303715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_101262699_101264782_101265322_101301319_101301441_101301955
m54284U_201016_223608/135332262/ccs	chr4	+	4432	18	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	198.134971996434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670924	149733356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_149671230_149698506_149698630_149710543_149710574_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
m54284U_201016_223608/135398326/ccs	chr19	-	2852	21	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	0	-367	combination_of_known_junctions	FALSE	canonical	3	100	junction_16	496.484226839081	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCGCTCTTGAACCTC	3866	False	NA	-21	True	AATAAA	-24	NA	5345483	5324326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338439_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
m54284U_201016_223608/135399025/ccs	chr2	-	3976	13	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_12	42.8027614633552	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315744	155232584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155315559
m54284U_201016_223608/135464168/ccs	chr3	+	189	1	Intergenic	novelGene_1577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAACAAAACCCAAAAA	NA	False	NA	NA	False	NA	NA	NA	95842945	95843134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95842900_95843100
m54284U_201016_223608/135465037/ccs	chr13	+	187	1	Intergenic	novelGene_7245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAGAATTCTGCATTAT	NA	False	NA	NA	False	NA	NA	NA	95665200	95665387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_95665200_95665400
m54284U_201016_223608/135594124/ccs	chr8	-	3551	12	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	405.675378100143	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70449034	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
m54284U_201016_223608/135660583/ccs	chr11	-	4278	24	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_21	95.1456151944862	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97171396	97096669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97154721_97154853_97158420_97158506_97171026
m54284U_201016_223608/13568022/ccs	chr7	+	4469	6	NIC	ENSMUSG00000048897.16	novel	4721	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	152.282106631081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTGTACGTGCTTCTT	NA	False	NA	18	True	AATAAA	-18	NA	79676134	79742497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79738282_79738381_79740082
m54284U_201016_223608/13568679/ccs	chr17	+	3539	19	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	493.967188518968	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923209	71966026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71950142_71950232_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
m54284U_201016_223608/135725896/ccs	chr12	+	183	1	Intergenic	novelGene_6711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAAAGAGCTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	72695250	72695433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_72695200_72695400
m54284U_201016_223608/135791891/ccs	chr2	+	2472	7	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	6051.45598641811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29952112	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959529_29959644_29960196_29960368_29960452_29960600_29960930
m54284U_201016_223608/135793341/ccs	chr17	+	1231	7	NNC	ENSMUSG00000060586.12	novel	1669	6	NA	NA	-5532	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	69.5477453904071	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCTTCATAGAGTTTCA	NA	False	NA	12	True	AATAAA	-16	NA	34519308	34535173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34519432_34524926_34525022_34528564_34528835_34533143_34533426_34534016_34534128_34534529_34534554_34534847
m54284U_201016_223608/135923405/ccs	chr10	-	1454	5	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	210.086291794586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520877	88511133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88520827
m54284U_201016_223608/135987726/ccs	chr2	+	2276	9	NNC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	141.368700124886	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCATACATTACTT	NA	False	NA	8	True	AATAAA	-15	NA	30282441	30290540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_30282525_30283663_30283866_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
m54284U_201016_223608/135988476/ccs	chr11	-	1583	3	ISM	ENSMUSG00000018678.14	ENSMUST00000062652.7	2367	8	1317	6519	1317	-6519	internal_fragment	FALSE	canonical	1	2	junction_2	252.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATAACAGCAAGAATGA	7976	False	NA	-12	True	AATAAA	-20	NA	96872468	96851563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_96852836_96854190_96854271_96872237
m54284U_201016_223608/135988552/ccs	chr4	+	1586	7	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_4	392.724988594648	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650936	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134653336_134653462_134654045_134654130_134654241
m54284U_201016_223608/136053869/ccs	chr18	-	3102	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	889	intron_retention	FALSE	canonical	3	906	junction_8	80.3187527344413	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784788	34765841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_34767218_34767445_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
m54284U_201016_223608/136185249/ccs	chr14	+	7530	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	154	junction_16	44.9305478737062	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8928	False	NA	16	True	AATAAA	-20	NA	27150790	27205512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202598
m54284U_201016_223608/136250779/ccs	chr16	+	3575	8	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	310	junction_7	143.492160064583	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGGTTGCCCCTTCA	7070	False	NA	-15	True	NA	NA	NA	38379059	38411708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38408666_38411273
m54284U_201016_223608/136314961/ccs	chr11	+	1520	11	NNC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	0	60	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_1	850.280683068832	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTATATGTTGTTTT	NA	False	NA	14	True	ATTAAA	-17	NA	107370309	107388619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_107370511_107376379_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
m54284U_201016_223608/136315069/ccs	chr14	+	1884	10	NNC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	1263	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	2355.85194676188	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTGACATTGGCAGGG	NA	False	NA	17	True	AATAAA	-12	NA	63359962	63380575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_63360015_63370774_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
m54284U_201016_223608/13632850/ccs	chr7	+	1301	4	NNC	ENSMUSG00000035585.17	novel	1319	4	NA	NA	72	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	530.083221977665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTGAGTCCTTAC	3005	False	NA	6	True	AATAAA	-16	NA	3697593	3704011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3697844_3697930_3698227_3698350_3698621_3703526
m54284U_201016_223608/136513078/ccs	chr1	-	6064	24	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	0	-1853	intron_retention	FALSE	canonical	2	1032	junction_2	150.157661314426	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066553	55026184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55055650_55055937_55056043_55058392_55058560_55066497
m54284U_201016_223608/136514042/ccs	chr17	+	4027	21	NNC	ENSMUSG00000061950.18	novel	3850	20	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	111.455495602505	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCACCCACTTTGTTTC	NA	False	NA	17	True	AATAAA	-27	NA	66090224	66148851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
m54284U_201016_223608/136577302/ccs	chr3	+	2220	18	NIC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_15	384.426270035524	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4849	False	NA	20	True	ATTAAA	-23	NA	34074246	34123494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
m54284U_201016_223608/136579092/ccs	chr5	+	185	1	Intergenic	novelGene_2999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATTAGACTGTG	NA	False	NA	NA	False	NA	NA	NA	137541828	137542013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137541800_137542000
m54284U_201016_223608/136579154/ccs	chr19	-	3492	15	NIC	ENSMUSG00000024941.10	novel	2586	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	227	junction_10	27.0876317886663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9907	False	NA	-11	True	AATAAA	-13	NA	5821429	5808454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
m54284U_201016_223608/136709142/ccs	chr3	-	3681	26	NNC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_21	278.879483648403	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTATGCTTTTATGTC	3507	False	NA	NA	False	AATAAA	-18	NA	89959822	89913300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946175_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201016_223608/136776334/ccs	chr5	-	188	1	Intergenic	novelGene_3008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAGAAAAACAAAACAAAAA	1015	False	NA	NA	False	NA	NA	NA	138154702	138154514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_138154500_138154700
m54284U_201016_223608/136839218/ccs	chr2	+	2592	10	NNC	ENSMUSG00000039515.12	novel	2586	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	163.062663104604	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGTGTGAGACATCTTT	NA	False	NA	17	True	ATTAAA	-20	NA	30306050	30337817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328372_30329675_30329777_30333301_30333410_30336388
m54284U_201016_223608/136972388/ccs	chr5	+	5969	4	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	2504	junction_1	202.501577497285	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296418	122313332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122296679_122306237_122306370_122306981_122311344_122312117
m54284U_201016_223608/13698986/ccs	chr13	-	183	1	Intergenic	novelGene_7282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCTAACTTCCAAATGT	NA	False	NA	NA	False	NA	NA	NA	101023038	101022855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_101022900_101023000
m54284U_201016_223608/137101500/ccs	chr2	+	3836	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	95.2666772587266	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942914	128968514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
m54284U_201016_223608/137101667/ccs	chr5	+	8743	57	NIC	ENSMUSG00000041638.19	novel	8555	58	NA	NA	0	0	intron_retention	FALSE	canonical	2	352	junction_15	70.4387466389148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGAGTTTGTCATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	115703330	115760713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
m54284U_201016_223608/137102246/ccs	chr8	+	2065	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	0	-383	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	134.331040353177	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTTCCTGCTGTTGCC	2378	False	NA	20	True	ATTAAA	-25	NA	70495683	70524614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511943_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
m54284U_201016_223608/137103133/ccs	chr6	-	1885	6	NNC	ENSMUSG00000004446.13	novel	2189	6	NA	NA	8904	-265	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	380.930964874214	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120884855	120870079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120884774
m54284U_201016_223608/137167682/ccs	chr9	+	3348	6	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_4	15.3414471286121	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	False	NA	19	True	AATAAA	-28	NA	20779953	20785603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20780233_20780625_20780750_20780899_20782532_20782671_20782822_20784163_20784561_20784837
m54284U_201016_223608/137232794/ccs	chr12	-	3036	31	NIC	ENSMUSG00000034761.16	novel	4498	32	NA	NA	0	-1257	combination_of_known_splicesites	FALSE	canonical	1	42	junction_9	20.3279774366922	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTCTAGTTCCAAGAAAC	NA	False	NA	-3	True	AATAAA	-17	NA	69939783	69851791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
m54284U_201016_223608/137233270/ccs	chr9	+	1544	2	Intergenic	novelGene_5119	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACTCTTTGACAGTTTT	1243	False	NA	15	True	NA	NA	NA	111353208	111361785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_111353258_111360290
m54284U_201016_223608/137233288/ccs	chr2	+	6022	24	NIC	ENSMUSG00000027130.16	novel	6060	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	19.8360958717408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGCTGTAGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	112114921	112193508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_112115151_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
m54284U_201016_223608/137233990/ccs	chr9	-	173	1	Intergenic	novelGene_4693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAAGTTCTGTCTT	NA	False	NA	NA	False	NA	NA	NA	31269558	31269385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_31269400_31269600
m54284U_201016_223608/137299492/ccs	chr2	+	3936	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	105.980213037885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3998	False	NA	33	True	ATTAAA	-21	NA	25222773	25242224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235203_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
m54284U_201016_223608/137300572/ccs	chr3	+	4056	13	NNC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	0	-3966	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.28626204439	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011838	96064480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
m54284U_201016_223608/137363578/ccs	chr5	+	2494	10	NNC	ENSMUSG00000029291.12	novel	619	2	NA	NA	-11875	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	30.6159000085468	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATTGTGTTGGTTGTCTT	119	False	NA	11	True	AATAAA	-15	NA	88782674	88799251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_88782879_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
m54284U_201016_223608/137497361/ccs	chr8	-	201	1	Intergenic	novelGene_4465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAATAAAACTAGTCCC	NA	False	NA	NA	False	NA	NA	NA	107687071	107686870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107686900_107687100
m54284U_201016_223608/137561946/ccs	chr1	-	8160	45	NNC	ENSMUSG00000026193.16	novel	8043	45	NA	NA	-85	0	intron_retention	FALSE	canonical	0	0	junction_5	520.157855092929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692444	71624678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634818_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
m54284U_201016_223608/137562328/ccs	chr11	-	2716	12	NIC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	0	266	intron_retention	FALSE	canonical	3	148	junction_5	12.1960568075461	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTGTGTATGTGTG	4645	False	NA	-3	True	AATATA	-15	NA	32217629	32182668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_32183117_32183903_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
m54284U_201016_223608/137562417/ccs	chr19	+	2592	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	46.3923485070545	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGTCCATGATGAGT	NA	False	NA	17	True	AATAAA	-20	NA	10666126	10691991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10666261_10683573_10683673_10687633_10687806_10688634_10688718_10689887
m54284U_201016_223608/137562729/ccs	chr2	+	2041	3	NIC	ENSMUSG00000095315.3	novel	2159	4	NA	NA	57	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	56.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTTGGGGAGCATC	NA	False	NA	NA	False	AATAAA	-20	NA	150153407	150168932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_150153479_150165621_150165749_150167089
m54284U_201016_223608/13763575/ccs	chr17	+	4786	18	NNC	ENSMUSG00000036552.20	novel	2535	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	62.9965122338786	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATGTTGCCTTTCATTT	NA	False	NA	14	True	ATTAAA	-27	NA	15261876	15284494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15281587
m54284U_201016_223608/13765111/ccs	chr13	+	4176	20	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_7	67.2116597192486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059486	35090047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077299_35077406_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
m54284U_201016_223608/137691275/ccs	chr2	+	174	1	Antisense	novelGene_ENSMUSG00000027487.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAATTAGAAAAACAAACA	786	False	NA	NA	False	NA	NA	NA	154214891	154215065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_154214900_154215100
m54284U_201016_223608/137692202/ccs	chr11	+	355	1	Intergenic	novelGene_6454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAGACAAAACAAAA	9955	False	NA	NA	False	NA	NA	NA	115430106	115430461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115430100_115430500
m54284U_201016_223608/137692919/ccs	chr6	-	2923	17	NIC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_15	193.208396233187	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	20	False	6217138	-4	True	AATAAA	-15	NA	6217118	6041218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
m54284U_201016_223608/137693822/ccs	chr15	+	1775	12	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	304.280970635544	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832719	80853320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
m54284U_201016_223608/1377606/ccs	chr5	+	175	1	Intergenic	novelGene_2963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAGCGGCACTT	NA	False	NA	5	True	NA	NA	NA	134558306	134558481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_134558300_134558500
m54284U_201016_223608/1377926/ccs	chrX	-	3093	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_20	18.3888553205467	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134986004	134972847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982185_134985845
m54284U_201016_223608/137822675/ccs	chr9	+	2408	12	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_1	6667.86631093455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1872	False	NA	20	True	AATAAA	-20	NA	59563858	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59563933_59564369_59564554_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201016_223608/137822873/ccs	chr2	+	2654	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	75.0698294252813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4065	False	NA	-41	True	NA	NA	NA	180609057	180624253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_180609123_180609394_180609608_180612806_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
m54284U_201016_223608/137825010/ccs	chr11	-	1943	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	299.949482926196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806826_96807023_96807209
m54284U_201016_223608/137889642/ccs	chrX	+	177	1	Intergenic	novelGene_9722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAGACAATGGAGC	NA	False	NA	NA	False	NA	NA	NA	161618931	161619108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_161618900_161619100
m54284U_201016_223608/138019367/ccs	chr3	-	2294	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_13	152.583161239208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662195	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658817_95658943_95660318_95660443_95661630_95661828_95662069
m54284U_201016_223608/138019950/ccs	chr4	-	2855	2	Intergenic	novelGene_1744	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACGGTCTTTCATGTTTC	NA	False	NA	0	True	NA	NA	NA	11191288	11175963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11178675_11191144
m54284U_201016_223608/138020281/ccs	chr2	+	5431	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	18.1510475266798	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135501473	135856513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
m54284U_201016_223608/138084730/ccs	chr11	+	5281	42	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_41	71.8700658498291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATTATGTTGTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	30721780	30807152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30806888
m54284U_201016_223608/138085575/ccs	chr8	+	3152	15	NIC	ENSMUSG00000031842.16	novel	3380	18	NA	NA	5960	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_14	1.66598625567009	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCTGGAGTGTGGCTAAG	NA	False	NA	NA	False	NA	NA	NA	71182673	71203835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198708_71198832_71198886_71199180_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
m54284U_201016_223608/138150275/ccs	chr19	+	2216	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	92	junction_3	189.441835885513	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
m54284U_201016_223608/138151504/ccs	chr2	-	183	1	Intergenic	novelGene_761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGTATATATAAAACTG	NA	False	NA	NA	False	NA	NA	NA	34970021	34969838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34969800_34970000
m54284U_201016_223608/138152043/ccs	chr17	-	7358	12	NIC	ENSMUSG00000034647.16	novel	10821	13	NA	NA	0	-1012	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	19.3732370565579	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTAAACTTTTTTACA	NA	False	NA	NA	False	AATAAA	-20	NA	66384068	66276086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66356780_66356929_66359948_66360087_66383878
m54284U_201016_223608/138152441/ccs	chr11	+	3417	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	30.4802392165639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616187	23682876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678935_23679075_23681320
m54284U_201016_223608/138152716/ccs	chr7	-	3125	4	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_3	11.3431330181157	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3423	False	NA	-4	True	AATAAA	-21	NA	29553094	29543360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_29545674_29545893_29546386_29550366_29550443_29552850
m54284U_201016_223608/138283503/ccs	chr5	+	2143	8	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1098	junction_7	56.9679465908287	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCAGTAGTCCTTTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	139238124	139255806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139253058_139253157_139253231_139254735
m54284U_201016_223608/13830795/ccs	chr14	+	4855	27	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	30.1476887355345	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	False	NA	35	True	NA	NA	NA	121272975	121521156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492849_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
m54284U_201016_223608/138349134/ccs	chr9	+	1658	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	766	junction_8	67.5113159239085	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799562	20803474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802662_20802746_20803044_20803127
m54284U_201016_223608/138412350/ccs	chr17	+	5229	2	Antisense	novelGene_ENSMUSG00000116868.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	704	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAGTAGCTGAGTAAGG	NA	False	NA	NA	False	NA	NA	NA	6843198	6848643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_6843908_6844123
m54284U_201016_223608/138414397/ccs	chr3	+	3057	12	NIC	ENSMUSG00000042626.14	novel	3154	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	168.084640229236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	NA	False	NA	32	True	ATTAAA	-29	NA	89325900	89337334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
m54284U_201016_223608/138478734/ccs	chr2	-	180	1	Intergenic	novelGene_800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACTGTTGAAATAGACAA	4470	False	NA	NA	False	NA	NA	NA	57119669	57119489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_57119500_57119700
m54284U_201016_223608/138545522/ccs	chr6	+	2276	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	10.3632969597244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	5827	False	NA	6	True	AATAAA	-21	NA	113448458	113460101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453386_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
m54284U_201016_223608/138674574/ccs	chr1	-	4463	2	Antisense	novelGene_ENSMUSG00000026623.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	55	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAGGTAAATCACATGA	3469	False	NA	NA	False	NA	NA	NA	191516367	191511870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_191513241_191513274
m54284U_201016_223608/138676317/ccs	chr9	+	2352	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	142	0	intron_retention	FALSE	canonical	3	1100	junction_8	86.9189836699798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446964	59472392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59470334_59470506_59470598_59471165_59471271_59472103
m54284U_201016_223608/138740339/ccs	chrX	+	3304	10	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_1	143.100931314963	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7707602	7741529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7707640_7707725_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
m54284U_201016_223608/138742011/ccs	chr1	-	184	1	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GATAAAGAAAAAAAGAAAAC	NA	False	NA	NA	False	NA	NA	NA	21131279	21131095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_21131100_21131300
m54284U_201016_223608/138805535/ccs	chr3	+	916	6	NIC	ENSMUSG00000027500.11	novel	2073	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_5	694.848357557244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACGGTTTGGTCTGGTCTC	NA	False	NA	23	True	AATAAA	-23	NA	8574574	8626666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325_8625397_8626398
m54284U_201016_223608/138872176/ccs	chr12	+	1451	13	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_11	275.952026325833	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	False	NA	NA	False	ATTAAA	-42	NA	105976541	106041479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036786_106036875_106041265
m54284U_201016_223608/138937965/ccs	chr4	-	6732	10	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	0	-20078	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	11.2447518622887	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGGACTGCATTTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	142939279	142854038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142871959_142872017_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
m54284U_201016_223608/13894283/ccs	chr7	+	2984	1	Genic_Genomic	ENSMUSG00000046185.11	novel	NA	NA	NA	NA	9883	1597	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTCCTCTCATGGTTT	NA	False	NA	3	True	AATATA	-15	NA	29477859	29480843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_29477900_29480800
m54284U_201016_223608/13895961/ccs	chr14	-	3496	20	ISM	ENSMUSG00000019027.9	ENSMUST00000048603.8	12872	78	54385	0	0	0	3prime_fragment	FALSE	canonical	0	0	junction_4	1.18391809254758	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGGCTAAGTACTTGA	9881	False	NA	NA	False	ATTAAA	-23	NA	30991468	30982331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_-_30982505_30983002_30983238_30983445_30983798_30984109_30984241_30984369_30984541_30985075_30985253_30985324_30985505_30985806_30985978_30986271_30986404_30986479_30986639_30986867_30987013_30987219_30987417_30987835_30987988_30988271_30988468_30988596_30988823_30989411_30989573_30989668_30989819_30989942_30990063_30990741_30990868_30991326
m54284U_201016_223608/139068336/ccs	chr9	-	3916	22	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_20	148.196137730021	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946499	109913387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944558_109944651_109946425
m54284U_201016_223608/139069302/ccs	chr4	+	1385	9	NNC	ENSMUSG00000035601.10	novel	2064	9	NA	NA	0	347	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	90.2966465324156	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCGATTTCCACCAGCT	-8	True	NA	12	True	CATAAA	-21	NA	45297154	45315489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_45297187_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
m54284U_201016_223608/139069767/ccs	chr16	+	3285	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	0	87	intron_retention	FALSE	canonical	0	0	junction_1	36.6614046887186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGTGATACTTTTT	6401	False	NA	11	True	AATAAA	-16	NA	44167776	44207593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
m54284U_201016_223608/139134003/ccs	chr16	-	1441	6	NNC	ENSMUSG00000005732.15	novel	1085	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	5048.94469765713	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTGACAAGGCTATGTG	7133	False	NA	-1	True	AATAAA	-22	NA	18066596	18057647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_18058058_18058757_18058824_18059252_18059738_18063064_18063223_18065152_18065290_18066411
m54284U_201016_223608/139198577/ccs	chr17	+	1079	9	NIC	ENSMUSG00000050668.11	novel	4134	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	40.2086355774478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAAGTGATGTGGCATT	8830	False	NA	8	True	AATACA	-20	NA	79142995	79152787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_79143108_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
m54284U_201016_223608/139199976/ccs	chr8	-	4212	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	51	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_4	190.539864595312	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414480	85397107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85414303
m54284U_201016_223608/139201182/ccs	chr11	+	175	1	Intergenic	novelGene_6275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	97485950	97486125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97486000_97486100
m54284U_201016_223608/139264141/ccs	chr1	+	3979	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	115	1697	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	74.6906118598583	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015212	178080164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071911_178072049_178076800
m54284U_201016_223608/139265937/ccs	chrX	-	173	1	Intergenic	novelGene_9381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	2674	False	NA	NA	False	NA	NA	NA	12125725	12125552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_12125600_12125700
m54284U_201016_223608/139266816/ccs	chr11	-	191	1	Intergenic	novelGene_6466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAATAAATCTTCAGAA	NA	False	NA	NA	False	NA	NA	NA	115986270	115986079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115986100_115986300
m54284U_201016_223608/139329720/ccs	chr3	+	2265	10	NIC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	-291	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	45.5520323840878	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAAGTATTGTTCTGGT	NA	False	NA	19	True	AATAAA	-19	NA	57643502	57742249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703717_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
m54284U_201016_223608/139462138/ccs	chr17	+	3412	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	114.032494150668	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332316	26342228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336737_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
m54284U_201016_223608/139593818/ccs	chr13	-	244	1	Intergenic	novelGene_7072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCAGACAGTCTGTCCT	NA	False	NA	NA	False	GATAAA	-42	NA	51880865	51880621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_51880600_51880900
m54284U_201016_223608/13959382/ccs	chr4	+	1176	9	NIC	ENSMUSG00000057375.14	novel	1321	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	129.727599222371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	NA	False	NA	29	True	AGTAAA	-19	NA	107171580	107217020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107216803
m54284U_201016_223608/13960593/ccs	chr12	+	922	6	NNC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	1205	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_5	67.517108942845	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGGTGGCGCATGCCT	NA	False	NA	NA	False	NA	NA	NA	113120040	113122414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113122174
m54284U_201016_223608/13961555/ccs	chr3	+	2316	20	NNC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	388.641165702593	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGTAAAGGATTCAT	NA	False	NA	43	True	AATAAA	-33	NA	151916118	151938426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_151916228_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
m54284U_201016_223608/139658804/ccs	chr18	+	4564	23	NNC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	-100	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_18	117.755805598136	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGTCCGATTGGAGAT	5655	False	NA	54	True	NA	NA	NA	31937150	32040350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32027356_32027446_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
m54284U_201016_223608/139659949/ccs	chr6	-	3450	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	145.545215387598	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	828	False	NA	-5	True	AATAAA	-18	NA	51989529	51834401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_51836619_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
m54284U_201016_223608/139660009/ccs	chr17	-	2030	3	NIC	ENSMUSG00000001525.11	novel	2649	4	NA	NA	0	800	intron_retention	FALSE	canonical	3	8733	junction_1	720	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCTTTCTCTTTCCAC	NA	False	NA	-32	True	NA	NA	NA	36149109	36145696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_36146932_36147054_36147629_36148888
m54284U_201016_223608/139724450/ccs	chr18	+	9613	15	NIC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	0	-2790	combination_of_known_splicesites	FALSE	canonical	3	18	junction_7	28.5999857285536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTACTGAAATTGGTATT	NA	False	NA	13	True	AATAAA	-18	NA	34353976	34452452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
m54284U_201016_223608/139724542/ccs	chrX	+	1431	5	NNC	ENSMUSG00000015217.12	novel	1571	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	347.83140671883	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGACTCACCAGTCTTT	NA	False	NA	NA	False	AATAAA	-45	NA	70599595	70604282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_70599615_70601726_70601814_70602038_70602179_70602703_70602879_70603272
m54284U_201016_223608/139854449/ccs	chr10	+	4453	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	intron_retention	FALSE	canonical	2	23	junction_6	306.096956761702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80438784_80442147_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449731_80449903_80450437
m54284U_201016_223608/139854527/ccs	chr8	+	3910	4	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	106	-777	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	537.629984282871	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACATAAATATAAATAG	NA	False	NA	NA	False	AATAAA	-5	NA	20016571	20045111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_20016689_20030550_20030924_20039783_20039904_20041811
m54284U_201016_223608/139855004/ccs	chr4	-	2308	1	Antisense	novelGene_ENSMUSG00000085525.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAGGAAAAAAAAAAA	8124	False	NA	NA	False	AATGAA	-27	NA	146216690	146214382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_146214400_146216700
m54284U_201016_223608/139855034/ccs	chrX	-	1057	8	NNC	ENSMUSG00000058328.14	novel	1474	8	NA	NA	0	303	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_7	139.651022779159	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161230
m54284U_201016_223608/139919925/ccs	chr4	-	1709	4	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	360.371413344005	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_126059411_126060723_126060756_126080341_126080382_126096362
m54284U_201016_223608/139921339/ccs	chr11	-	206	1	Intergenic	novelGene_5878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	59792482	59792276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_59792300_59792500
m54284U_201016_223608/139921886/ccs	chr11	+	2272	10	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_1	36.8269225190243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATAAGAATCTGGGAGT	7673	False	NA	28	True	AATAAA	-35	NA	58197894	58205453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
m54284U_201016_223608/139987361/ccs	chr9	+	3889	13	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_4	17.6704005488148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9042	False	NA	2	True	AATAAA	-13	NA	78303058	78330869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
m54284U_201016_223608/139987482/ccs	chrX	-	3965	11	NNC	ENSMUSG00000031232.18	novel	4115	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	66.0984871233828	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATGGTTTTTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	105055392	105011689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_105014596_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
m54284U_201016_223608/140052175/ccs	chr7	+	3797	7	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	549	junction_1	84.2054366151946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_138448245_138448340_138448434_138470138_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
m54284U_201016_223608/140116907/ccs	chr13	-	3966	28	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	154.313373639327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073453	106930946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
m54284U_201016_223608/140183232/ccs	chr2	+	184	1	Intergenic	novelGene_1307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTGTTTCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	177488866	177489050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_177488900_177489000
m54284U_201016_223608/140248219/ccs	chr17	+	3750	10	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	59	junction_1	736.668493377993	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	False	NA	37	True	AATGAA	-26	NA	35460753	35472683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35460829_35462222_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
m54284U_201016_223608/140313414/ccs	chr12	+	3940	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	-646	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	110.208707385912	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGCCCCCTGGGTCAG	8457	False	NA	12	True	AATAAA	-12	NA	73954776	73993658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
m54284U_201016_223608/140378572/ccs	chr15	+	1938	9	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	219.175122618878	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGACAAGATTAAGT	7502	False	NA	-6	True	NA	NA	NA	79775859	79792107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
m54284U_201016_223608/140380317/ccs	chr11	+	2153	10	NIC	ENSMUSG00000018899.18	novel	2069	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	19.5170074613634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGGCTTTTTATTTA	NA	False	NA	10	True	TATAAA	-17	NA	53661302	53668149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_53661584_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
m54284U_201016_223608/140444484/ccs	chr2	+	2881	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_5	405.393329347302	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405168	27426547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410420_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
m54284U_201016_223608/140510517/ccs	chr3	+	3142	3	NIC	ENSMUSG00000047824.14	novel	3198	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGGACTCCTTTGTTC	NA	False	NA	NA	False	AATAAA	-16	NA	89337730	89342435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89338037_89338326_89338484_89339756
m54284U_201016_223608/140642184/ccs	chr10	-	178	1	Intergenic	novelGene_5385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAACAAGGGG	NA	False	NA	NA	False	NA	NA	NA	69443392	69443214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_69443200_69443400
m54284U_201016_223608/140642523/ccs	chr7	-	2083	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	241.126522804937	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTACAAGCCATTCC	NA	False	NA	-16	True	AATAAA	-15	NA	44203375	44199055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201768_44201930_44202045_44202120_44202179_44203002_44203133_44203232
m54284U_201016_223608/140708368/ccs	chr18	+	3218	13	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_6	160.217733794428	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	2	True	NA	NA	False	AATAAA	-22	NA	7868844	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
m54284U_201016_223608/140903411/ccs	chr9	+	3286	8	NIC	ENSMUSG00000038145.18	novel	1664	9	NA	NA	0	597	intron_retention	FALSE	canonical	3	20	junction_3	6.34388666033558	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTCTGTGTAAGTTTCC	8271	False	NA	NA	False	NA	NA	NA	121946383	121997138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_121946474_121960958_121961009_121961693_121961817_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
m54284U_201016_223608/140903989/ccs	chr11	+	4224	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_21	53.0816766793681	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	987	False	NA	21	True	AATAAA	-24	NA	101443692	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101471410
m54284U_201016_223608/14090910/ccs	chr15	+	4520	32	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	-3791	0	intron_retention	FALSE	canonical	3	79	junction_14	137.871473424284	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	32	False	NA	30	True	ATTAAA	-20	NA	12833644	12935377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
m54284U_201016_223608/14092749/ccs	chr1	+	702	4	NIC	ENSMUSG00000026568.7	novel	1025	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	205.825708360793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGTCTTTACATTTGCC	NA	False	NA	12	True	AATAAA	-17	NA	165288792	165308688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_165289081_165305789_165305875_165307035_165307148_165308471
m54284U_201016_223608/14092960/ccs	chr8	+	171	1	Intergenic	novelGene_4376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	85630689	85630860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_85630700_85630900
m54284U_201016_223608/140968593/ccs	chr4	+	202	1	Intergenic	novelGene_2215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGCTGCCCTTAAGT	4685	False	NA	NA	False	AAAAAG	-7	NA	133082210	133082412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133082200_133082400
m54284U_201016_223608/141034792/ccs	chr14	+	1369	10	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	28	junction_1	727.515406480623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881338	21895587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_21881513_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
m54284U_201016_223608/141035276/ccs	chr4	+	2447	1	Intergenic	novelGene_2043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGTTTAGGAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	117291218	117293665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_117291200_117293700
m54284U_201016_223608/141035635/ccs	chr4	+	3055	3	Intergenic	novelGene_2344	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	33	junction_2	3.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146370014	146393561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_146370163_146384326_146384431_146390758
m54284U_201016_223608/141100184/ccs	chr11	-	1638	4	NIC	ENSMUSG00000020921.7	novel	1574	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	131.230924539742	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTTTGCTTCTGTCT	4465	False	NA	0	True	AATAAA	-16	NA	102047230	102043371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102044421_102045382_102045530_102046549_102046731_102046969
m54284U_201016_223608/141101142/ccs	chr8	-	1498	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	153.13787864713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	594	False	NA	-9	True	NA	NA	NA	71725122	71703768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71724927
m54284U_201016_223608/141101255/ccs	chr11	-	1306	6	NNC	ENSMUSG00000059923.14	novel	2041	6	NA	NA	0	-774	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	348.945841069929	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCTGGTATTTTCTCTA	4491	False	NA	NA	False	AATAAA	-15	NA	115599402	115536249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_115536778_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
m54284U_201016_223608/141231667/ccs	chr2	-	173	1	Intergenic	novelGene_1255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAGAAAAGTACA	NA	False	NA	NA	False	NA	NA	NA	167947778	167947605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_167947600_167947800
m54284U_201016_223608/141363836/ccs	chr4	+	3174	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	0	-805	intron_retention	FALSE	canonical	3	1814	junction_2	376.940584285684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAGCTCTGACTTTGC	22	False	NA	1	True	AATAAA	-7	NA	40722558	40733095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
m54284U_201016_223608/141427174/ccs	chr19	+	1471	3	NIC	ENSMUSG00000056201.9	novel	1148	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	6173	junction_2	86.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGCTTTTGGGTTTGG	NA	False	NA	12	True	NA	NA	NA	5540543	5544057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_5540631_5542524_5543260_5543408
m54284U_201016_223608/141429268/ccs	chr8	-	189	1	Intergenic	novelGene_4238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAATAGGTTCAAGCTC	NA	False	NA	NA	False	NA	NA	NA	25956835	25956646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_25956600_25956800
m54284U_201016_223608/141494477/ccs	chr8	-	2679	12	NIC	ENSMUSG00000037103.9	novel	2199	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_7	21.9424491427043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTCCTGTTCTGT	9257	False	NA	-3	True	ACTAAA	-17	NA	84831397	84823700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84829511_84829584_84829683_84831245
m54284U_201016_223608/141560370/ccs	chr17	+	2825	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	34	junction_13	449.818313662441	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88028310_88028487_88030758
m54284U_201016_223608/14157782/ccs	chr10	-	3538	1	NIC	ENSMUSG00000055531.13	novel	6526	10	NA	NA	0	-7255	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4474	False	NA	NA	False	NA	NA	NA	117212875	117209337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_117209300_117212900
m54284U_201016_223608/141755957/ccs	chr1	-	177	2	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTGAAAACAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	21547279	21487926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_21488061_21547236
m54284U_201016_223608/141756291/ccs	chr7	+	6841	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_8	33.5151686393731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	122723403	122793210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
m54284U_201016_223608/141819934/ccs	chr5	-	2529	3	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4248	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_2	277.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110585435	110577740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_110580012_110580766_110580968_110585378
m54284U_201016_223608/141821754/ccs	chr4	-	1746	8	NIC	ENSMUSG00000028494.13	novel	1888	8	NA	NA	0	-141	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	201.72642618261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCTCCTGTGTGGTC	NA	False	NA	-21	True	AATAAA	-15	NA	86587797	86574942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86587682
m54284U_201016_223608/141886909/ccs	chr7	-	3562	6	NIC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	0	-968	intron_retention	FALSE	canonical	3	217	junction_5	45.7226420933874	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGT	NA	False	NA	-21	True	NA	NA	NA	42155164	42123777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42139701_42150781_42150850_42155033
m54284U_201016_223608/141887208/ccs	chr10	+	1397	10	NNC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	86	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	532.846537099347	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTTGGTTGTTCTGTCCC	2289	False	NA	36	True	ACTAAA	-24	NA	79795988	79803531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_79796202_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
m54284U_201016_223608/142017197/ccs	chr14	-	3113	5	NNC	ENSMUSG00000022124.16	novel	3352	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	72.973882314154	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9922	False	NA	-4	True	AATAAA	-13	NA	103336435	103318469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332867_103332978_103336204
m54284U_201016_223608/142018187/ccs	chr11	+	4583	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	75	0	intron_retention	FALSE	canonical	3	5	junction_3	104.725164120187	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122964	29170797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29138129_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
m54284U_201016_223608/142018704/ccs	chr2	-	2401	3	ISM	ENSMUSG00000026890.20	ENSMUST00000136821.9	825	5	2850	-1730	2850	0	3prime_fragment	FALSE	canonical	3	7	junction_1	4	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCCATGGAATTCCAT	NA	False	NA	NA	False	AATAAA	-39	NA	35981435	35971965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_35974088_35980973_35981149_35981331
m54284U_201016_223608/14222472/ccs	chr15	+	2063	14	NIC	ENSMUSG00000022550.19	novel	2040	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	114	junction_9	18.1199161407206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTTTGTGTTTTAT	3157	False	NA	NA	False	AAGAAA	-1	NA	76460612	76480016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
m54284U_201016_223608/14223453/ccs	chr3	+	5046	8	NIC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2177	junction_3	244.828803160786	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGATGTCCTTTCCTG	NA	False	NA	29	True	AATAAA	-19	NA	79498671	79510957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_79498865_79500916_79501058_79502508_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
m54284U_201016_223608/142281281/ccs	chr6	+	2999	10	NNC	ENSMUSG00000029781.8	novel	549	2	NA	NA	5481	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	240.823586884674	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56814524	56856343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_56814884_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
m54284U_201016_223608/142345563/ccs	chr8	+	4369	35	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	71.0022905230217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3565636	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_3565691_3566506_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
m54284U_201016_223608/142411819/ccs	chr9	-	175	1	Intergenic	novelGene_5097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTTTTTAATTAAT	NA	False	NA	NA	False	NA	NA	NA	109758345	109758170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_109758200_109758300
m54284U_201016_223608/142412311/ccs	chr4	+	3271	12	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_1	208.386640012111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9714	False	NA	34	True	AATAAA	-20	NA	155648298	155675454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155648437_155661184_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
m54284U_201016_223608/142475471/ccs	chr7	+	1448	5	ISM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	760	-125	0	0	3prime_fragment	FALSE	canonical	3	59	junction_4	570.385998688607	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTGAGTCCTTAC	2933	False	NA	6	True	AATAAA	-16	NA	3697521	3704011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
m54284U_201016_223608/142475699/ccs	chr11	+	193	1	Intergenic	novelGene_6184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCCTGTTTAAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	87929738	87929931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87929700_87929900
m54284U_201016_223608/142476802/ccs	chr2	+	4048	22	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	343.861116034049	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201016_223608/142477834/ccs	chr7	-	642	1	FSM	ENSMUSG00000099647.2	ENSMUST00000122119.2	321	1	-46	-275	-46	275	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGCTACTTCAAAGC	NA	False	NA	NA	False	AATAAA	-40	NA	54062272	54061630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_54061600_54062300
m54284U_201016_223608/142606686/ccs	chr13	-	526	1	Intergenic	novelGene_6962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTCAACATAGCTCATAT	NA	False	NA	NA	False	NA	NA	NA	9329739	9329213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_9329200_9329700
m54284U_201016_223608/142608472/ccs	chr17	-	197	1	Intergenic	novelGene_8737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACTGCCAAGATAAAGTA	NA	False	NA	NA	False	NA	NA	NA	80363066	80362869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_80362900_80363100
m54284U_201016_223608/142672554/ccs	chr10	+	3193	11	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	294	junction_9	203.215255332861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTGTAACTATCAACTT	2793	False	NA	12	True	AATAAA	-20	NA	20188217	20216012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
m54284U_201016_223608/142674014/ccs	chr5	+	4435	17	NIC	ENSMUSG00000029267.18	novel	3732	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	694.135253390865	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213582	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201016_223608/142739958/ccs	chr11	-	1432	1	NIC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	-7	-2365	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9118	False	NA	NA	False	NA	NA	NA	116570511	116569079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116569100_116570500
m54284U_201016_223608/142740195/ccs	chr11	+	4749	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	88	0	intron_retention	FALSE	canonical	3	27	junction_4	78.3308084699472	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122977	29170797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138287_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
m54284U_201016_223608/14288394/ccs	chr15	-	152	1	Intergenic	novelGene_7997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATTTTAAA	6652	False	NA	NA	False	NA	NA	NA	101047682	101047530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_101047500_101047700
m54284U_201016_223608/142934852/ccs	chr5	+	2043	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	206.218767164378	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696163	74756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
m54284U_201016_223608/143001037/ccs	chr17	+	2933	10	NIC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	117.112481543742	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTACAGTGTTGGTTTT	NA	False	NA	30	True	ATTAAA	-22	NA	8384371	8415307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_8384531_8384755_8384810_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
m54284U_201016_223608/143067509/ccs	chr19	+	188	1	Intergenic	novelGene_9347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAATGGCACAC	NA	False	NA	NA	False	NA	NA	NA	57285503	57285691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_57285500_57285700
m54284U_201016_223608/143131458/ccs	chr16	+	2497	16	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	764.066855713556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324109_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
m54284U_201016_223608/143132182/ccs	chr18	+	4944	21	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	436	junction_6	88.1976615336257	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
m54284U_201016_223608/143261926/ccs	chr8	-	2455	7	ISM	ENSMUSG00000031958.17	ENSMUST00000070004.4	2273	11	1151	-637	-636	-131	3prime_fragment	FALSE	canonical	2	7	junction_4	3.60555127546399	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCGTTGAAGATTCAACAAT	NA	False	NA	NA	False	AATACA	-21	NA	112355855	112352265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355353_112355617
m54284U_201016_223608/143262629/ccs	chr3	-	176	1	Intergenic	novelGene_1558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATACAACAATAAC	7799	False	NA	-1	True	NA	NA	NA	94830548	94830372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_94830400_94830500
m54284U_201016_223608/143262723/ccs	chr4	+	184	1	Intergenic	novelGene_2237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGGTTCTATTTAAGAA	8705	False	NA	NA	False	NA	NA	NA	134557069	134557253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_134557100_134557300
m54284U_201016_223608/143264340/ccs	chr11	+	188	1	Intergenic	novelGene_5816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAACTTCTTTCTGATG	NA	False	NA	NA	False	NA	NA	NA	51993617	51993805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_51993600_51993800
m54284U_201016_223608/143458589/ccs	chr5	-	158	1	Intergenic	novelGene_2873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATATTTTAA	9759	False	NA	NA	False	NA	NA	NA	122978935	122978777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_122978800_122978900
m54284U_201016_223608/143459447/ccs	chr11	-	1381	8	NIC	ENSMUSG00000020718.13	novel	1506	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	16.8001457719623	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGGACTTTTGTA	4319	False	NA	NA	False	AATAAA	-33	NA	106670341	106659078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669909
m54284U_201016_223608/143460605/ccs	chr3	+	2793	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	376.85898407435	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGTATATTTATCTC	NA	False	NA	50	True	AATAAA	-36	NA	19242428	19274981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269639_19269868_19271343_19271588_19272325_19272486_19273201
m54284U_201016_223608/14353072/ccs	chr13	+	3070	27	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	116.078560675608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	18901459	19050981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
m54284U_201016_223608/14354900/ccs	chr13	-	1262	9	NIC	ENSMUSG00000033114.12	novel	1542	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	35.5773804544404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTGTGATATTACAGT	NA	False	NA	NA	False	AATAAA	-19	NA	64277150	64244954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64276999
m54284U_201016_223608/143590260/ccs	chr16	+	155	1	Intergenic	novelGene_8326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAATAAATAAA	4214	False	NA	NA	False	NA	NA	NA	91381756	91381911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_91381800_91381900
m54284U_201016_223608/143590321/ccs	chr1	-	537	1	FSM	ENSMUSG00000102824.2	ENSMUST00000191699.2	381	1	-21	-135	-21	135	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGGGTTTTGTTATTAG	NA	False	NA	NA	False	AATAAA	-34	NA	189010041	189009504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_189009500_189010000
m54284U_201016_223608/143655489/ccs	chr9	-	4656	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_16	148.471938987361	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7183	False	NA	-3	True	AATAAA	-20	NA	22300484	22243307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274215_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
m54284U_201016_223608/143722982/ccs	chr7	-	2064	10	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24742	-328	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_9	17.7332776384533	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGTTTGGTGTCTTGT	NA	False	NA	-4	True	NA	NA	NA	26410604	26364979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26410317
m54284U_201016_223608/143786040/ccs	chr1	-	3688	16	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	2842	junction_6	233.704143452072	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287401	128259326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
m54284U_201016_223608/143918482/ccs	chr9	-	847	2	Intergenic	novelGene_4822	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGCAAAAATAAAAAAAA	NA	False	NA	NA	False	AATAAA	-42	NA	59182492	59181521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_59182170_59182293
m54284U_201016_223608/143918610/ccs	chr16	+	4649	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	76.7834142789531	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482726	31692167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
m54284U_201016_223608/143919766/ccs	chr13	+	1227	9	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	319.703671389617	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337526	85361029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357004_85359972_85360034_85360858
m54284U_201016_223608/143985353/ccs	chr12	+	1321	8	NNC	ENSMUSG00000021286.9	novel	794	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_6	286.13568923338	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	16	True	ATTAAA	-17	NA	111780641	111794820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793979_111794120_111794251
m54284U_201016_223608/144179720/ccs	chr2	-	1023	4	ISM	ENSMUSG00000027077.8	ENSMUST00000028471.6	1761	8	6377	0	6377	0	3prime_fragment	FALSE	canonical	3	109	junction_3	14.8996644257513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTGGCAGTTTGCC	4146	False	NA	-19	True	AATAAA	-19	NA	84646619	84641519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_84641884_84645634_84645787_84645950_84646066_84646227
m54284U_201016_223608/144180943/ccs	chr15	+	283	1	Intergenic	novelGene_7622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATTTAAAAAATTAGGCA	NA	False	NA	NA	False	NA	NA	NA	8214209	8214492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8214200_8214500
m54284U_201016_223608/144180964/ccs	chr7	+	2276	13	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	153	junction_7	2158.85604191716	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510361	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28516830_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
m54284U_201016_223608/14420332/ccs	chr2	+	2981	8	NNC	ENSMUSG00000037523.14	novel	2867	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	77.1359785293054	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGAGTTCCAAATTTC	7264	False	NA	14	True	ATTAAA	-19	NA	131075986	131089945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_131076048_131079346_131079461_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
m54284U_201016_223608/144245122/ccs	chr15	-	5188	7	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	107.135039397326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTACTTTCTTTT	2180	False	NA	-10	True	AATAAA	-20	NA	4025226	4011516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021437_4021550_4021839_4021947_4025096
m54284U_201016_223608/144312813/ccs	chr4	+	195	1	Intergenic	novelGene_1912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACATGAAGGGAAAATTCA	NA	False	NA	NA	False	NA	NA	NA	83159614	83159809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_83159600_83159800
m54284U_201016_223608/144312976/ccs	chr15	-	1272	11	NIC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	112.30422966211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1649	False	NA	NA	False	AATAAA	-23	NA	89313633	89310569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312782_89312916_89313031_89313251_89313361_89313579
m54284U_201016_223608/144376880/ccs	chr9	+	729	3	NIC	ENSMUSG00000066442.18	novel	1406	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	155	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAATAGAAATTATTA	NA	False	NA	NA	False	AATAAA	-21	NA	89093452	89122279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_89093535_89097261_89097524_89121894
m54284U_201016_223608/1444209/ccs	chr9	+	2394	12	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	41	junction_9	6611.8519767145	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1869	False	NA	20	True	AATAAA	-20	NA	59563855	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59582479_59582850_59583018_59585326_59585509_59586010
m54284U_201016_223608/144441893/ccs	chr19	+	4809	6	NNC	ENSMUSG00000025203.7	novel	5455	6	NA	NA	-217	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	1073.59396421552	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCGTGGTGTTTTGGCT	850	False	NA	22	True	AATAAA	-23	NA	44281895	44295303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_44281988_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
m54284U_201016_223608/144442126/ccs	chr1	+	2234	14	NIC	ENSMUSG00000033793.13	novel	2049	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	139.358420021071	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATAATTAAAGGATTCT	NA	False	NA	-12	True	NA	NA	NA	5153354	5232642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
m54284U_201016_223608/144443306/ccs	chr17	+	3102	8	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_1	90.3293294290511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148025	37170290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_37148157_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
m54284U_201016_223608/144507460/ccs	chr12	+	2157	10	NNC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	-51	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	1986.03784480247	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758239	24764094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_24758460_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
m54284U_201016_223608/144508477/ccs	chr3	-	2508	17	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	19	junction_13	152.949223089723	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662195	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658292_95658817_95658943_95660318_95660443_95661630_95661828_95662069
m54284U_201016_223608/144509319/ccs	chr2	+	2962	15	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	78.2569029360532	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTCTGATTTTGTTT	4692	False	NA	27	True	ATTAAA	-29	NA	14078918	14152351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14138453_14138520_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
m54284U_201016_223608/144704571/ccs	chr11	+	1160	9	NNC	ENSMUSG00000020407.14	novel	430	5	NA	NA	206	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	930.094887632439	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068992	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_9069052_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
m54284U_201016_223608/144704639/ccs	chr19	-	1787	8	NIC	ENSMUSG00000025190.14	novel	2058	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	297.400163320159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTGTGATCCATTCA	8437	False	NA	-3	True	NA	NA	NA	43512924	43488190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_43488997_43491346_43491490_43492960_43493127_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
m54284U_201016_223608/144704701/ccs	chr16	-	4041	29	NNC	ENSMUSG00000039637.16	novel	4296	28	NA	NA	-3980	493	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_28	22.0708506627994	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTTGTGCTGCTCCAC	7972	False	NA	-1	True	ATTAAA	-16	NA	4501621	4444747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415_4497856_4501339
m54284U_201016_223608/144769931/ccs	chr4	+	2628	11	NIC	ENSMUSG00000028645.12	novel	3260	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	273.7542693731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	669	False	NA	36	True	TATAAA	-18	NA	118966000	118994527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_118966170_118973203_118973318_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
m54284U_201016_223608/144771720/ccs	chr8	-	192	1	Intergenic	novelGene_4523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGATGGTAAGCAGATG	NA	False	NA	NA	False	NA	NA	NA	114839470	114839278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_114839300_114839500
m54284U_201016_223608/144836393/ccs	chr18	-	4417	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_14	71.811194429764	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877680	53814794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
m54284U_201016_223608/14484243/ccs	chr1	+	1446	12	NIC	ENSMUSG00000018189.13	novel	1845	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	458.199927492049	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	25	True	NA	NA	NA	143653042	143682679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143678665_143678816_143682421
m54284U_201016_223608/14484371/ccs	chr12	+	1543	4	NNC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	1205	intron_retention	FALSE	canonical	3	62	junction_3	84.4169545898347	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGGTGGCGCATGCCT	NA	False	NA	NA	False	NA	NA	NA	113120040	113122414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_113120192_113120294_113121348_113121688_113121788_113122174
m54284U_201016_223608/144900480/ccs	chr6	-	226	1	Intergenic	novelGene_3151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCGTGCTGGAGAGATG	NA	False	NA	NA	False	NA	NA	NA	30233663	30233437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_30233400_30233700
m54284U_201016_223608/144901394/ccs	chr15	-	1333	11	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	0	-1397	combination_of_known_junctions	FALSE	canonical	1	1	junction_9	953.639114130707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTATTCTTTTCAGAGC	NA	False	NA	-6	True	AATAAA	-19	NA	10486033	10476261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485436_10485503_10485820
m54284U_201016_223608/144968515/ccs	chr5	-	186	1	Intergenic	novelGene_2959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAACAAAAAAGAAACCA	6290	False	NA	NA	False	NA	NA	NA	134337945	134337759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_134337800_134337900
m54284U_201016_223608/145031652/ccs	chr15	-	150	1	Intergenic	novelGene_7878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATGAAACTTAA	4098	False	NA	NA	False	NA	NA	NA	84127972	84127822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_84127800_84128000
m54284U_201016_223608/145031680/ccs	chr7	+	184	1	Intergenic	novelGene_4012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	109376034	109376218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109376000_109376200
m54284U_201016_223608/145032962/ccs	chr7	-	1401	12	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	1527.14858261678	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635780	44626181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633194_44633300_44633503_44633558_44635706
m54284U_201016_223608/145098260/ccs	chr5	+	3106	18	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	91.8634084559722	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283743	110319838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
m54284U_201016_223608/145359410/ccs	chr10	+	3467	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_19	29.0870736107926	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCATCTTTCTGTGC	1778	False	NA	4	True	ATTAAA	-17	NA	45453924	45588255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
m54284U_201016_223608/145360127/ccs	chr10	-	1341	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	0	-225	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	331.259315906738	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGCGGCCATGCATGGTC	NA	False	NA	-20	True	AATAAA	-15	NA	79602744	79594600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_79595071_79596624_79596741_79596826_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
m54284U_201016_223608/145360953/ccs	chr12	-	897	1	FSM	ENSMUSG00000091498.5	ENSMUST00000181662.2	330	1	-51	-516	-51	516	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGAATCCAAGGGAATT	NA	False	NA	NA	False	AATAAA	-35	NA	110825379	110824482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_110824500_110825400
m54284U_201016_223608/145426994/ccs	chr5	-	2644	1	Intergenic	novelGene_2533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCCTTGGTACTTTCTTA	NA	False	NA	NA	False	NA	NA	NA	33029398	33026754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_33026800_33029400
m54284U_201016_223608/14549078/ccs	chr1	-	4393	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	20.8533907392885	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6554	False	NA	NA	False	AAGAAA	-10	NA	92108063	91860478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
m54284U_201016_223608/145491782/ccs	chrX	-	172	1	Intergenic	novelGene_9384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	12422091	12421919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_12421900_12422100
m54284U_201016_223608/14549657/ccs	chr19	-	686	5	NIC	ENSMUSG00000016495.13	novel	1012	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	17.2825779327044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATCATGGCAGTATTC	NA	False	NA	-105	True	AATAAA	-15	NA	29339273	29326104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_29326406_29327759_29327870_29335716_29335804_29338216_29338328_29339196
m54284U_201016_223608/14550109/ccs	chr11	-	179	1	Intergenic	novelGene_6216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGAGATGAATTAGT	NA	False	NA	NA	False	NA	NA	NA	94571108	94570929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_94570900_94571100
m54284U_201016_223608/14551746/ccs	chr12	-	168	1	Intergenic	novelGene_6632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAAATCTTTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	52068318	52068150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_52068200_52068300
m54284U_201016_223608/145556359/ccs	chr13	-	3899	12	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	0	-1383	intron_retention	FALSE	canonical	3	368	junction_4	40.0938980539062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGAGGTGTTCCTGA	NA	False	NA	-3	True	TATAAA	-19	NA	98399521	98384735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
m54284U_201016_223608/145557099/ccs	chr10	-	4359	11	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	193	0	intron_retention	FALSE	canonical	2	10	junction_10	7.95298686029343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACCTGTCATGTTGGG	3019	False	NA	NA	False	AATAAA	-17	NA	127177562	127165750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
m54284U_201016_223608/145557228/ccs	chr15	-	8903	6	NIC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_5	201.842512865848	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGGTAGTTTGAAG	NA	False	NA	0	True	AATAAA	-22	NA	103148243	103099970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123549_103148159
m54284U_201016_223608/145623412/ccs	chr15	+	237	1	Intergenic	novelGene_7900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAACATGACAAAACAAAG	NA	False	NA	NA	False	NA	NA	NA	88611280	88611517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_88611300_88611500
m54284U_201016_223608/145686691/ccs	chr8	-	1833	4	NIC	ENSMUSG00000031987.7	novel	3594	5	NA	NA	0	-1624	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	128.380510808906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTTGCCAGTGAGT	NA	False	NA	-10	True	ATTAAA	-23	NA	125676063	125636949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_125637503_125638479_125638548_125642399_125642520_125674971
m54284U_201016_223608/145687541/ccs	chr8	+	2691	13	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	377.101472860202	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201016_223608/145752438/ccs	chr1	+	2717	5	NNC	ENSMUSG00000066877.12	novel	2772	5	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	74.5620546927189	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCTGTGTGTTTGTGTT	NA	False	NA	11	True	AATAAA	-15	NA	43484962	43609675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_43485188_43548780_43548944_43572714_43572954_43593020_43593743_43608307
m54284U_201016_223608/145819350/ccs	chr12	+	3392	8	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_6	22.1018052637871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2788	False	NA	22	True	AATAAA	-19	NA	80509993	80544896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80538005_80539315_80539673_80543554
m54284U_201016_223608/145885151/ccs	chr2	+	965	5	NIC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	539.338657524194	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745181	145758238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_145745283_145753616_145753684_145754312_145754449_145757453_145757600_145757723
m54284U_201016_223608/146080094/ccs	chr3	-	1341	6	NIC	ENSMUSG00000028104.15	novel	607	7	NA	NA	0	0	intron_retention	TRUE	canonical	3	25	junction_5	29.5540183393054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTAACAGAGTGATGT	NA	False	NA	0	True	NA	NA	NA	96501475	96485187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_96485905_96487113_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96501399
m54284U_201016_223608/14615881/ccs	chr9	-	3232	18	NNC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	77.3019514339821	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537327	113483539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_113484176_113485084_113485276_113486144_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
m54284U_201016_223608/146211428/ccs	chr18	+	4868	32	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	19796	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	16.1479888600645	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	4998	False	NA	NA	False	AATAAA	-19	NA	12657051	12716070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_12657178_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
m54284U_201016_223608/146212128/ccs	chr6	-	4333	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_22	129.620767369019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3493	False	NA	-9	True	AATAAA	-20	NA	125168566	125144969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
m54284U_201016_223608/146212642/ccs	chr5	-	4389	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_26	174.664111296935	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
m54284U_201016_223608/146279083/ccs	chr11	+	4244	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	100	-1200	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	108.886636401245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2016	False	NA	26	True	AATAAA	-16	NA	87018002	87110309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
m54284U_201016_223608/146344462/ccs	chr4	+	190	1	Intergenic	novelGene_2094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAATTGCCCTTAGTAAG	NA	False	NA	NA	False	NA	NA	NA	124180828	124181018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_124180800_124181000
m54284U_201016_223608/146344507/ccs	chr2	+	1256	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	49.0736408087093	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857984	119863075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119862055_119862133_119862321_119862482_119862594
m54284U_201016_223608/146408883/ccs	chr1	+	214	1	Intergenic	novelGene_349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATGTCATCTATACATA	NA	False	NA	NA	False	NA	NA	NA	136486244	136486458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_136486200_136486500
m54284U_201016_223608/146475082/ccs	chr2	-	195	1	Intergenic	novelGene_1281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTTGAGGCAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	170005372	170005177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_170005200_170005400
m54284U_201016_223608/146605676/ccs	chr3	-	2427	5	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	0	164	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	1200.66655966592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTTTTCTT	NA	False	NA	-3	True	AATATA	-17	NA	9069783	8994493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_8996235_9009670_9009773_9012540_9012690_9018743_9018860_9069464
m54284U_201016_223608/146671384/ccs	chr4	+	2398	4	NIC	ENSMUSG00000050213.7	novel	2345	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	40.7785346584314	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGAGGGTATTACTTTT	NA	False	NA	14	True	AATAAA	-20	NA	124960494	124967835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_124960746_124961799_124961986_124964899_124965484_124966458
m54284U_201016_223608/146737270/ccs	chr1	+	4161	31	NIC	ENSMUSG00000026553.18	novel	4622	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	29	junction_1	205.033970085176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTTGCCGTTTCCCTG	3040	False	NA	13	True	AATAAA	-18	NA	171910371	171949895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171910517_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
m54284U_201016_223608/146867394/ccs	chr10	-	2157	11	NIC	ENSMUSG00000019813.17	novel	2255	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_8	61.0777373516734	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGAAATATTCTGGG	367	False	NA	4	True	AATAAA	-25	NA	41685626	41594836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621918_41685568
m54284U_201016_223608/146999160/ccs	chr10	+	1492	5	NIC	ENSMUSG00000078440.11	novel	1444	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	318.019653480724	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGGCTCCTGCTGTGTG	NA	False	NA	15	True	AATAAA	-19	NA	81220261	81224186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81220461_81221552_81221882_81222246_81222324_81223073_81223315_81223540
m54284U_201016_223608/147065466/ccs	chr14	+	5849	12	NIC	ENSMUSG00000021990.17	novel	1208	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	4.14010819517662	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGTTCTAGTGATGCA	NA	False	NA	4	True	ATTAAA	-12	NA	60940401	61001998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_60940572_60944162_60944529_60946873_60947019_60983093_60983231_60984162_60984343_60984889_60985076_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
m54284U_201016_223608/147129401/ccs	chr9	+	1972	7	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	0	-162	intron_retention	FALSE	canonical	3	13	junction_3	53.5184288093571	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTCTGTGACAGAACCA	1791	False	NA	22	True	AATAAA	-39	NA	119939470	119953408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949503_119949738_119949914_119951159_119951327_119952707
m54284U_201016_223608/147196369/ccs	chr3	+	2914	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	0	0	multi-exon	FALSE	canonical	3	36	junction_12	335.692091142168	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89072123	89090072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
m54284U_201016_223608/147260139/ccs	chr17	+	2566	10	NNC	ENSMUSG00000039656.18	novel	2577	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	69.5796905234087	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	21	True	CATAAA	-21	NA	34250785	34257373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253125_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
m54284U_201016_223608/147326713/ccs	chr14	-	2749	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.4984565054474	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70864494	70841109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
m54284U_201016_223608/147522394/ccs	chr11	+	1054	3	NNC	ENSMUSG00000086391.2	novel	1075	4	NA	NA	14017	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	3	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGTAAATATTTTATTT	2736	False	NA	NA	False	NA	NA	NA	11832139	11835321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_11832389_11832956_11833080_11834639
m54284U_201016_223608/147588955/ccs	chr18	+	3921	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	1773	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	81.4708536840016	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACACGAAGGTGTCGTCT	NA	False	NA	10	True	ATTAAA	-17	NA	82990900	83021598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_82990978_83004868_83006324_83011194_83011315_83012594_83012663_83019397
m54284U_201016_223608/147653040/ccs	chr1	-	1884	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	0	-1086	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	175.278191582537	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTGTGTGGCTCTGATT	NA	False	NA	-17	True	TATAAA	-28	NA	36749028	36738280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
m54284U_201016_223608/147653606/ccs	chr5	+	3631	6	NNC	ENSMUSG00000055991.16	novel	3794	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	23.6101673013979	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGAGGTTTCTCTC	937	False	NA	10	True	ATTAAA	-15	NA	145141371	145158560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155531_145156862
m54284U_201016_223608/147655328/ccs	chr15	-	1195	1	FSM	ENSMUSG00000068964.6	ENSMUST00000091031.6	435	1	-14	-746	-14	746	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCACTTCCTCTAGCT	6652	False	NA	NA	False	AATAAA	-39	NA	31446977	31445782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_31445800_31447000
m54284U_201016_223608/147785161/ccs	chr13	-	181	1	Intergenic	novelGene_7264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTTTTTAAAAAAAGA	NA	False	NA	-6	True	NA	NA	NA	97298429	97298248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_97298200_97298400
m54284U_201016_223608/147785886/ccs	chr1	-	1312	6	NNC	ENSMUSG00000026021.16	novel	1215	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	1439.42688595149	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGCTCCTTTTATTTTA	589	False	NA	0	True	AATAAA	-21	NA	59709993	59678592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_59679428_59681576_59681649_59683675_59683754_59691930_59692028_59694616_59694692_59709838
m54284U_201016_223608/147786009/ccs	chr2	+	3616	28	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	956	junction_9	75.5117156763742	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854915	146919920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
m54284U_201016_223608/147916352/ccs	chr12	-	2704	6	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-68	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_2	30.7310917476096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATAAAGGATTTGGGG	7601	False	NA	1	True	AATAAA	-21	NA	87346547	87325411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_87326977_87329073_87329268_87329419_87329561_87331799_87332161_87333668_87333912_87346347
m54284U_201016_223608/147917360/ccs	chr10	-	3754	9	NNC	ENSMUSG00000019917.11	novel	2532	10	NA	NA	349	0	intron_retention	FALSE	canonical	2	11	junction_8	14.6495520409329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCTATGTATTTCCTAA	NA	False	NA	-29	True	AATAAA	-15	NA	59057320	58999941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057200
m54284U_201016_223608/147981523/ccs	chr11	-	149	1	Intergenic	novelGene_5739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTACATATAATAAATAATA	NA	False	NA	NA	False	NA	NA	NA	23271587	23271438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23271400_23271600
m54284U_201016_223608/147982447/ccs	chr4	+	3622	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_15	165.086993901868	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-20	True	NA	16	True	NA	NA	NA	40970971	41012608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011455
m54284U_201016_223608/148046002/ccs	chr1	-	3987	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	5.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTTAACTCTGC	-20	True	NA	NA	False	AATAAA	-17	NA	10038157	10030387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_10033747_10037323_10037743_10037948
m54284U_201016_223608/148048258/ccs	chr8	-	176	1	Intergenic	novelGene_4484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111211432	111211256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_111211300_111211400
m54284U_201016_223608/14812320/ccs	chr17	+	1573	11	NIC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	699.847383362973	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	False	NA	37	True	AATGAA	-26	NA	35460753	35472683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35460829_35462222_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
m54284U_201016_223608/148177088/ccs	chr9	+	4502	20	NIC	ENSMUSG00000032571.15	novel	4929	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	35.7025259626095	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGAGAGTTGGGATTTTT	NA	False	NA	24	True	AGTAAA	-15	NA	105520206	105564848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_105520227_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
m54284U_201016_223608/148177770/ccs	chr7	+	1139	6	NIC	ENSMUSG00000030983.5	novel	1244	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	614.874491258175	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAAGTGTTCATGTCC	1322	False	NA	23	True	AATAAA	-24	NA	133311076	133322874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_133311258_133315916_133315992_133316627_133316709_133319327_133319516_133320832_133321008_133322435
m54284U_201016_223608/148374591/ccs	chr19	+	3289	13	NIC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_10	310.864777229943	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6425687
m54284U_201016_223608/148441837/ccs	chr2	+	500	4	NNC	ENSMUSG00000087283.2	novel	566	3	NA	NA	-27247	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	58.0344725141876	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGGTATACCCTTAT	2639	False	NA	NA	False	NA	NA	NA	60214621	60242923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_60214668_60241980_60242062_60242190_60242353_60242712
m54284U_201016_223608/148507122/ccs	chr3	+	4846	15	NIC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	256	junction_10	35.9895109435955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7808	False	NA	27	True	AATAAA	-23	NA	40754476	40771318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40769524_40770749
m54284U_201016_223608/148570202/ccs	chr17	+	1573	5	NNC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	183.138438073497	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_25459320_25459417_25460232_25460661_25460836_25461132_25461197_25461427
m54284U_201016_223608/148570906/ccs	chr1	-	3296	16	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	2257	junction_10	185.766328727487	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCTTTGTGCTTTAA	NA	False	NA	-12	True	AGTAAA	-24	NA	20890484	20873229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_20873879_20875040_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
m54284U_201016_223608/148701610/ccs	chr1	+	2688	10	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	68233	330	-84	-322	3prime_fragment	FALSE	canonical	3	10	junction_1	34.5450144694044	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATCATTCTTCTCTA	NA	False	NA	15	True	NA	NA	NA	173246677	173293276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
m54284U_201016_223608/148703222/ccs	chr10	+	189	1	Intergenic	novelGene_5494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGTAGCCTTAATTA	4071	False	NA	NA	False	NA	NA	NA	89690464	89690653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_89690500_89690700
m54284U_201016_223608/14878946/ccs	chr16	-	4383	15	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	65.4459194094402	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107110	18071811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18087451_18087515_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
m54284U_201016_223608/148963489/ccs	chrX	-	2383	11	NIC	ENSMUSG00000036572.17	novel	2344	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_3	55.9360348970143	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGTTTATTTATTCAAG	NA	False	NA	-1	True	AATAAA	-24	NA	36373975	36355330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_36356315_36359174_36359476_36360510_36360672_36362718_36362758_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
m54284U_201016_223608/148964151/ccs	chr14	-	4296	18	NIC	ENSMUSG00000022185.20	novel	4383	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	59	junction_15	155.599365775564	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2945	False	NA	-1	True	AATAAA	-24	NA	54924073	54879618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884291_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
m54284U_201016_223608/149096692/ccs	chr9	+	1721	8	NIC	ENSMUSG00000032519.12	novel	961	8	NA	NA	0	-162	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	64.126469430592	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTCTGTGACAGAACCA	1791	False	NA	22	True	AATAAA	-39	NA	119939470	119953408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_119939639_119945567_119945690_119946518_119946604_119948948_119949072_119949322_119949503_119949738_119949914_119951159_119951327_119952707
m54284U_201016_223608/149160967/ccs	chr3	-	6989	24	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	53522	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_8	23.0471695156761	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	271	False	NA	-25	True	AATAAA	-18	NA	27711025	27470310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27710592
m54284U_201016_223608/149161668/ccs	chr9	+	2712	6	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	19.6916225842362	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105272590	105282666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
m54284U_201016_223608/149359286/ccschrX_GL456233v2	chrX_GL456233v2_random	+	2262	8	Intergenic	novelGene_9779	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_5	6.38557046817915	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAGGGTTAAATTTTC	NA	False	NA	NA	False	NA	NA	NA	251318	468931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_GL456233v2_random_+_251453_354605_354788_394862_395040_409324_409605_422004_422125_460904_461142_467193_467333_467938
m54284U_201016_223608/149423374/ccs	chr13	-	1830	15	NIC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	308	junction_9	2338.89545381523	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5157	False	NA	-5	True	AATAAA	-14	NA	58549924	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
m54284U_201016_223608/14942484/ccs	chr19	-	6362	16	NIC	ENSMUSG00000035173.15	novel	6445	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_11	16.2693986776812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGTTGATGGCGTCT	5197	False	NA	-1	True	ATTAAA	-22	NA	56810622	56775912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796492_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
m54284U_201016_223608/14942911/ccs	chr4	+	3681	12	NIC	ENSMUSG00000042608.16	novel	3492	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	134.010422685811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTAGCCTGCCTCTG	NA	False	NA	22	True	AATAAA	-23	NA	125997764	126034822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_125997940_126012066_126012256_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
m54284U_201016_223608/14944315/ccs	chr11	-	2031	7	NIC	ENSMUSG00000025158.8	novel	2118	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	56.0518113494609	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCTCCTCTTGTCAT	NA	False	NA	-4	True	AGTAAA	-19	NA	120675033	120671571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120672730_120672804_120672891_120673208_120673375_120673832_120673987_120674093_120674197_120674560_120674610_120674718
m54284U_201016_223608/149487654/ccs	chr5	+	4287	16	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	677.372492306363	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213582	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108213832_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201016_223608/149490499/ccs	chr13	-	2161	16	NIC	ENSMUSG00000021494.10	novel	2199	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	642	junction_9	46.138728008282	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684334	55678228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
m54284U_201016_223608/149553919/ccs	chr17	-	1664	6	NNC	ENSMUSG00000024206.16	novel	4141	5	NA	NA	0	-2026	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	106.679707536157	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTTACTCCTTTTTAT	NA	False	NA	NA	False	CATAAA	-17	NA	57138013	57108934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_57109953_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
m54284U_201016_223608/149554016/ccs	chr7	-	3205	11	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	376	junction_6	42.5305772356783	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976622	125969238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125974376_125975845_125975912_125976008
m54284U_201016_223608/149619295/ccs	chr4	+	175	1	Intergenic	novelGene_1813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGCTGACAGTCTG	NA	False	NA	NA	False	NA	NA	NA	41029731	41029906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_41029700_41029900
m54284U_201016_223608/149619319/ccs	chr18	-	170	1	Intergenic	novelGene_8932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGGAGTTCAGATAG	NA	False	NA	NA	False	NA	NA	NA	42324531	42324361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_42324400_42324500
m54284U_201016_223608/149686562/ccs	chr17	+	2647	5	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	64	junction_2	774.062780076655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTTTTCCATTCATT	NA	False	NA	17	True	AATAAA	-18	NA	29709726	29715086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29710200_29710298_29710406_29710638_29711006_29712695_29712873_29713563
m54284U_201016_223608/149750652/ccs	chr11	-	3217	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	494.225031966434	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
m54284U_201016_223608/149750842/ccs	chr4	+	2678	11	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	73.1142257019795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
m54284U_201016_223608/149751533/ccs	chr18	-	187	1	Intergenic	novelGene_9052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGAGATCTTCTGCCGCT	NA	False	NA	NA	False	NA	NA	NA	82661920	82661733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_82661700_82661900
m54284U_201016_223608/149751584/ccs	chr9	-	4664	7	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_3	313.821826661067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGATTTTATAATGGT	NA	False	NA	-4	True	ATTAAA	-37	NA	96993210	96957617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_96961293_96962204_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
m54284U_201016_223608/149751912/ccs	chr11	+	2267	7	NIC	ENSMUSG00000020515.14	novel	2035	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	277.391069711257	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57994978	58009420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008032
m54284U_201016_223608/149752643/ccs	chr11	-	2784	4	NNC	ENSMUSG00000035455.13	novel	2961	3	NA	NA	0	-88	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	242.201477195238	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACGGAGTTGCTTCAT	NA	False	NA	-9	True	AATAAA	-20	NA	11758959	11750375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_11752762_11752850_11753064_11756095_11756216_11758894
m54284U_201016_223608/149752662/ccs	chr7	-	1703	9	NIC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2342	junction_8	206.630558001473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGAGGCCTCGGTTTTC	9881	False	NA	-13	True	NA	NA	NA	19449363	19435237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19435783_19436772_19436876_19436990_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
m54284U_201016_223608/149817764/ccs	chr7	+	3154	28	NNC	ENSMUSG00000056394.21	novel	3174	28	NA	NA	-111	0	at_least_one_novel_splicesite	TRUE	canonical	2	58	junction_1	258.091332288531	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	996	False	NA	30	True	AATAAA	-18	NA	13011127	13045350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_13011325_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
m54284U_201016_223608/149881446/ccs	chr6	+	172	1	Intergenic	novelGene_3360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTAAAAAGAAAGGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	86294780	86294952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_86294800_86295000
m54284U_201016_223608/150013209/ccs	chr14	-	1168	7	NNC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	1592.64807439964	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTATCTCCATTTAATA	NA	False	NA	NA	False	AATAAA	-40	NA	31923855	31902118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915364_31915445_31915810_31915905_31920925_31920985_31923599
m54284U_201016_223608/150014044/ccs	chr2	+	5487	36	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	-817	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	10.0369114690095	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	10	True	AATAAA	-13	NA	24865227	24944069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_24866326_24868137_24868234_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
m54284U_201016_223608/15008175/ccs	chr6	+	6293	20	NIC	ENSMUSG00000029992.15	novel	6238	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	34.6378173872402	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGACTTTTTCTTTT	9949	False	NA	14	True	AATAAA	-15	NA	87019831	87069179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_87019988_87027902_87028011_87030183_87030243_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
m54284U_201016_223608/15010470/ccs	chr2	+	5036	23	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_1	47.2740384433549	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4592	False	NA	12	True	AATAAA	-16	NA	18069396	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201016_223608/150143228/ccs	chr16	+	3730	10	NIC	ENSMUSG00000022967.14	novel	3909	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_2	50.8296598551245	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATATTTTCTTTATTTA	NA	False	NA	24	True	NA	NA	NA	91282125	91304329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_91282305_91286583_91286708_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
m54284U_201016_223608/150210861/ccs	chr7	-	192	1	Intergenic	novelGene_4088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAAGTCCTCTGTTGAG	NA	False	NA	NA	False	NA	NA	NA	126125781	126125589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_126125600_126125800
m54284U_201016_223608/150406472/ccs	chr16	+	4158	26	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	36.3301747862572	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18696019	18789059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_18696270_18713523_18713587_18714652_18714797_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
m54284U_201016_223608/150406675/ccs	chr9	+	4682	26	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_17	205.873553425397	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290869	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44291235_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299305_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
m54284U_201016_223608/150407974/ccs	chr3	-	3476	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	259.770316402684	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201016_223608/150536558/ccs	chr2	-	174	1	Intergenic	novelGene_1223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAATAAATAAAA	3571	False	NA	NA	False	NA	NA	NA	165231148	165230974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_165231000_165231100
m54284U_201016_223608/150602438/ccs	chr7	+	2615	6	NIC	ENSMUSG00000025439.6	novel	1504	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1189	junction_3	39.3263270596175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGCTGTGATTTTGCTCT	NA	False	NA	11	True	AATAAA	-17	NA	97345901	97368086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97363288_97365657_97365747_97367425
m54284U_201016_223608/150668339/ccs	chr12	-	2318	4	NIC	ENSMUSG00000021067.9	novel	2524	5	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	65.576079649688	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTCCTTGAATGCA	NA	False	NA	-14	True	ATTAAA	-17	NA	70033841	70011785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_70013122_70015843_70015988_70030982_70031427_70033447
m54284U_201016_223608/150734190/ccs	chr8	-	4388	7	NNC	ENSMUSG00000025591.7	novel	4328	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	369.903440853901	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAGTCTGATAACAAA	NA	False	NA	0	True	AATAAA	-17	NA	66939173	66925769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_66929562_66930666_66930710_66932989_66933141_66934114_66934200_66935157_66935252_66936709_66936823_66939063
m54284U_201016_223608/150734708/ccs	chr7	-	3749	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	59	0	intron_retention	FALSE	canonical	3	143	junction_22	237.014331609778	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7301	False	NA	0	True	NA	NA	NA	126101213	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
m54284U_201016_223608/150735123/ccs	chr8	-	4375	5	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	51	0	intron_retention	FALSE	canonical	3	570	junction_4	39.1176111233802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85414480	85397107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85403882_85414303
m54284U_201016_223608/15074546/ccs	chr9	+	1521	13	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	145	junction_1	1677.55762237513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765781	108778691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108765856_108766134_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
m54284U_201016_223608/150798572/ccs	chr19	-	3219	21	NNC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_3	503.233136826263	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3866	False	NA	-25	True	AATAAA	-18	NA	5345483	5323959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_5324556_5324819_5325006_5325091_5325189_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
m54284U_201016_223608/150798958/ccs	chrX	+	5683	26	NNC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	164	junction_4	86.7100916848783	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAGAAAAAAAAAAGCAAAA	NA	False	NA	-20	True	AATAAA	-35	NA	151016224	151056768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
m54284U_201016_223608/1508129/ccs	chr19	+	905	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	-12	-260	-12	260	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAACAGCGGAT	NA	False	NA	NA	False	NA	NA	NA	23653199	23654104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_23653200_23654100
m54284U_201016_223608/150930402/ccs	chr3	+	3452	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1317	junction_9	113.299995096597	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6105	False	NA	NA	False	AATAAA	-26	NA	88461064	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472636_88472997_88473185_88475387
m54284U_201016_223608/150930672/ccs	chr4	+	2755	10	NNC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	9	junction_3	76.5216018883266	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8271	False	NA	22	True	NA	NA	NA	156194454	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156194481_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
m54284U_201016_223608/150997332/ccs	chr3	+	3260	11	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	406.990417577613	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6111	False	NA	NA	False	AATAAA	-26	NA	88461070	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88461220_88462708_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
m54284U_201016_223608/151060844/ccs	chr8	-	222	1	Intergenic	novelGene_4308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGCAAGGTAACACCGCT	NA	False	NA	NA	False	NA	NA	NA	65526156	65525934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_65525900_65526200
m54284U_201016_223608/151192000/ccs	chr1	-	3645	18	NIC	ENSMUSG00000060985.16	novel	3759	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	4.86211254582866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTTTGTGATCTATATT	NA	False	NA	NA	False	GATAAA	-17	NA	156131176	156082867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_156083416_156087300_156087506_156090398_156090543_156090975_156091159_156094782_156094942_156098135_156098271_156098768_156098970_156104131_156104199_156104867_156105081_156111834_156112056_156112955_156113165_156115797_156115952_156120896_156120954_156122004_156122089_156128166_156128307_156129083_156129477_156129936_156130173_156130880
m54284U_201016_223608/151192288/ccs	chr12	+	3486	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	251	junction_3	70.8601909866652	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201016_223608/151258211/ccs	chr11	-	173	1	Intergenic	novelGene_5764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAAGAATGTTG	NA	False	NA	NA	False	NA	NA	NA	31571860	31571687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_31571700_31571900
m54284U_201016_223608/151259122/ccs	chr17	+	4870	20	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_7	33.7657729635013	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	9439	False	NA	11	True	AATAAA	-18	NA	3165246	3249134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
m54284U_201016_223608/151388314/ccs	chr1	+	1215	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_3	9429.70911534391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_86454673_86456894_86456967_86457177_86457279_86457457_86457527_86457686
m54284U_201016_223608/151388740/ccs	chr15	-	2989	14	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	8.88386610227084	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGATCTTTTAATTTGTA	2674	False	NA	2	True	ATTAAA	-24	NA	58953909	58815090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
m54284U_201016_223608/151388766/ccs	chr4	-	3535	9	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_1	22.2650931954034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCATCTTTGGCCCCCTT	8248	False	NA	-5	True	AATAAA	-35	NA	156319314	156313796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_156315144_156315370_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
m54284U_201016_223608/151390775/ccs	chr11	-	2042	14	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	107.105710100324	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508739	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201016_223608/15140118/ccs	chr8	+	2547	12	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	417.641726328019	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2103	False	NA	94	True	AATAAA	-24	NA	13388750	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201016_223608/151454360/ccs	chr13	-	176	1	Intergenic	novelGene_7129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGATAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	58853976	58853800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58853800_58854000
m54284U_201016_223608/151456061/ccs	chr2	-	1453	4	NNC	ENSMUSG00000057234.10	novel	2018	7	NA	NA	113613	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	19.09624744987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATTTATTT	NA	False	NA	NA	False	AATAAA	-17	NA	108995012	108922644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_108923643_108961829_108962009_108967685_108967878_108994928
m54284U_201016_223608/151521391/ccs	chr2	-	1308	5	Fusion	ENSMUSG00000078867.10_ENSMUSG00000083817.2	novel	2135	3	NA	NA	0	-2235	multi-exon	FALSE	canonical	1	4	junction_2	140.284309528899	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTTCTTCCTTTTTTT	NA	False	NA	0	True	NA	NA	NA	177090113	176919500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_-_176920428_177081219_177081347_177085086_177085189_177086489_177086545_177090016
m54284U_201016_223608/151522132/ccs	chr9	+	1344	9	NNC	ENSMUSG00000055334.5	novel	1391	9	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	66.806506980982	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCTTGTGGTTATTCGG	NA	False	NA	8	True	AATATA	-19	NA	56858214	56890490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_56858238_56864297_56864467_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
m54284U_201016_223608/151585779/ccs	chr6	+	2550	3	NIC	ENSMUSG00000030036.9	novel	2780	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	153	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCCTTGCTTTAGACA	5173	False	NA	28	True	AATAAA	-17	NA	83092476	83095879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83092908_83093608_83093806_83093957
m54284U_201016_223608/151586085/ccs	chr7	+	2210	7	NIC	ENSMUSG00000003865.17	novel	480	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	83.740505266103	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTGGACATAAGCTC	NA	False	NA	25	True	AATACA	-21	NA	45097028	45106043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_45097078_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
m54284U_201016_223608/151783590/ccs	chr2	+	2206	13	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	92.6614207148201	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859438	162888061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162859577_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
m54284U_201016_223608/151913743/ccs	chr5	-	3315	10	NIC	ENSMUSG00000004530.13	novel	3491	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_8	306.929396312878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGTGTGCTGTGCTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	114046766	113980496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114020018_114020219_114046671
m54284U_201016_223608/151914353/ccs	chr2	+	3943	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	11.9745099644574	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950277	28977668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
m54284U_201016_223608/151914492/ccs	chr5	-	787	1	Intergenic	novelGene_2991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCCAAAACCAAACAACAAC	NA	False	NA	NA	False	AATAAA	-15	NA	136181016	136180229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_136180200_136181000
m54284U_201016_223608/151914878/ccs	chr5	-	164	1	Intergenic	novelGene_2697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	100938634	100938470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_100938500_100938600
m54284U_201016_223608/151979664/ccs	chr4	-	177	1	Intergenic	novelGene_2088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGAAATGAAGG	8961	False	NA	NA	False	NA	NA	NA	123477457	123477280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_123477300_123477500
m54284U_201016_223608/152044723/ccs	chr5	-	1259	5	Antisense	novelGene_ENSMUSG00000029651.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_2	4.55521678957215	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGTAGTATACTCTTTC	8608	False	NA	-1	True	NA	NA	NA	147949125	147941084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_147941718_147942673_147942827_147943327_147943469_147943860_147944081_147949013
m54284U_201016_223608/15205292/ccs	chr6	+	3704	8	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	19.9632315080725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGCCTGTGTGTGCT	NA	False	NA	12	True	ATTAAA	-17	NA	127430582	127471203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_127430786_127444994_127445116_127447667_127447794_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
m54284U_201016_223608/15205770/ccs	chr7	-	1816	7	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	19619	junction_6	466.768590060071	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398342	126394405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395928_126396025_126396081_126396508_126396949_126398216
m54284U_201016_223608/152305846/ccs	chr10	+	4516	28	NNC	ENSMUSG00000025369.16	novel	4533	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_17	24.5570358751608	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGTGGGTGCCTCTGT	2681	False	NA	46	True	TATAAA	-19	NA	128295176	128326041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317954_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
m54284U_201016_223608/152371646/ccs	chr8	+	2695	18	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	79.4584176686668	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792246	123824494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_123792449_123792965_123793099_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
m54284U_201016_223608/152371701/ccs	chr11	+	187	1	Intergenic	novelGene_5685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGTTAGCGAGGTCC	229	False	NA	NA	False	NA	NA	NA	5798225	5798412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_5798200_5798400
m54284U_201016_223608/152373758/ccs	chr7	-	1239	10	NIC	ENSMUSG00000109324.3	novel	1508	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1118.3310757829	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTCTCGCCCTGGGGCT	NA	False	NA	-30	True	AATAAA	-17	NA	44635780	44626181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44626408_44626927_44627050_44627550_44627699_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
m54284U_201016_223608/152438583/ccs	chr7	-	3005	5	NIC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	18.7082869338697	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3423	False	NA	-4	True	AATAAA	-21	NA	29553094	29543360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552701
m54284U_201016_223608/152503841/ccs	chr3	+	2130	5	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	102.806857747915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910098	30951341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_30910207_30931383_30931711_30944090_30944191_30948277_30948390_30949858
m54284U_201016_223608/152568803/ccs	chr5	-	3054	16	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	347.876504268716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719036	38684155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_38685256_38686867_38687013_38687114_38687193_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
m54284U_201016_223608/152701223/ccs	chr11	+	210	1	Intergenic	novelGene_6202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCACAATCATCCTTAA	NA	False	NA	NA	False	NA	NA	NA	89638236	89638446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_89638200_89638400
m54284U_201016_223608/15271055/ccs	chr8	+	182	1	Intergenic	novelGene_4527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTAAGAAGAGCTTAC	NA	False	NA	NA	False	NA	NA	NA	117594959	117595141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_117595000_117595100
m54284U_201016_223608/152765746/ccs	chr2	-	188	1	Intergenic	novelGene_1051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTTATTCTGTGAACTT	9096	False	NA	NA	False	NA	NA	NA	126801143	126800955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_126801000_126801100
m54284U_201016_223608/152767143/ccs	chr15	-	2561	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_3	398.463749919613	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432145	98416700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
m54284U_201016_223608/152830070/ccs	chr14	+	3712	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	114.227925235433	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043975	32070108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_32044074_32045846_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
m54284U_201016_223608/152830904/ccs	chr4	+	2005	16	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	0	136	combination_of_known_splicesites	FALSE	canonical	3	8	junction_12	241.994673954247	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972504_155972567_155972640_155972784_155972852_155972983_155973076
m54284U_201016_223608/152832862/ccs	chr10	-	790	8	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_3	1840.73094399026	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337802	95316667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95316840_95326107_95326275_95326396_95326444_95326648_95326729_95329492_95329578_95332685_95332750_95336244_95336385_95337767
m54284U_201016_223608/152895985/ccs	chr13	-	6777	1	NIC	ENSMUSG00000044934.14	novel	3532	5	NA	NA	0	-5958	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTATTTTGAATTACCT	6050	False	NA	NA	False	AATAAA	-32	NA	64301016	64294239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_64294200_64301000
m54284U_201016_223608/152961734/ccs	chr8	+	2857	6	NIC	ENSMUSG00000019428.17	novel	1698	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	559.390883014731	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980396	70987978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70980487_70982040_70982326_70983589_70985400_70986766_70986845_70987132_70987265_70987516
m54284U_201016_223608/152963816/ccs	chr5	+	3482	11	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_7	35.5870763058726	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112246	107132298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
m54284U_201016_223608/153093503/ccs	chr4	+	2467	14	NIC	ENSMUSG00000012126.17	novel	1573	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_2	25.7307404852087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTCACAAGGCTCTC	NA	False	NA	15	True	AATAAA	-15	NA	133829913	133854087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_133829960_133835562_133835667_133836401_133836431_133836870_133836970_133839825_133839921_133840225_133840281_133840667_133840745_133843341_133843469_133850702_133850915_133851152_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
m54284U_201016_223608/153290989/ccs	chr6	+	1742	12	NNC	ENSMUSG00000038388.15	novel	616	3	NA	NA	33833	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	331.464643540386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTGCGCATCAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	50121672	50175404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_50121699_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
m54284U_201016_223608/153355627/ccs	chr5	+	2216	10	NIC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	1059.49673587668	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_77099350_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201016_223608/153420625/ccs	chr15	+	194	1	Intergenic	novelGene_7628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCTTTTTTTTTTTTA	2440	False	NA	NA	False	NA	NA	NA	8834767	8834961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8834800_8835000
m54284U_201016_223608/153552348/ccs	chr7	-	1392	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_9	686.433747713499	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748402_27748528_27748628_27749407
m54284U_201016_223608/153683765/ccs	chr2	-	1676	7	NIC	ENSMUSG00000026972.16	novel	1590	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	75	junction_2	4.41273409829124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	9381	False	NA	-34	True	AATAAA	-14	NA	24825200	24815366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_24815689_24815767_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
m54284U_201016_223608/153684328/ccs	chr13	-	269	1	Intergenic	novelGene_7080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAATGCTAATACTATC	NA	False	NA	NA	False	NA	NA	NA	54627120	54626851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_54626900_54627100
m54284U_201016_223608/153813048/ccs	chr9	+	3346	16	NNC	ENSMUSG00000032058.15	novel	2074	16	NA	NA	0	-184	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	195.3755358278	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	14	True	NA	14	True	ATTAAA	-20	NA	50768263	50792547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772580_50772708_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
m54284U_201016_223608/153814827/ccs	chr7	-	2636	10	NIC	ENSMUSG00000030970.17	novel	1997	10	NA	NA	0	565	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	334.998102076805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAGTACATCTCACCT	6283	False	NA	-5	True	AATAAA	-28	NA	132714428	132588726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132714349
m54284U_201016_223608/153815573/ccs	chr1	-	5565	29	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	319	-118	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	63.8298419588345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	9153	False	NA	-40	True	ATTAAA	-12	NA	97697817	97633890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
m54284U_201016_223608/153815676/ccs	chr1	-	5755	23	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_18	80.4197279566905	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778397	152712746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152736513_152736617_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
m54284U_201016_223608/153879705/ccs	chr8	-	170	1	Intergenic	novelGene_4595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAGGAGACAGAGAG	NA	False	NA	NA	False	NA	NA	NA	124684653	124684483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124684500_124684700
m54284U_201016_223608/154011989/ccs	chr13	-	170	1	Intergenic	novelGene_7327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAGAATACTTAAA	NA	False	NA	NA	False	NA	NA	NA	120154669	120154499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_120154500_120154700
m54284U_201016_223608/15403696/ccs	chr10	-	1514	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	918	junction_5	149.282818837266	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235256	80228372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
m54284U_201016_223608/154140908/ccs	chrX	-	3722	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	798	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_18	124.493607402242	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223651	59101315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
m54284U_201016_223608/154141722/ccs	chr5	+	5208	21	NNC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	105	junction_4	312.280963236634	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	766	False	NA	14	True	NA	NA	NA	75735614	75817382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775984_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
m54284U_201016_223608/154208180/ccs	chr4	+	5332	29	NNC	ENSMUSG00000028782.15	novel	5104	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	7.96252382817695	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	129878662	129916426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_129879101_129885846_129886673_129898817_129898902_129899182_129899348_129900544_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915358_129915455_129915942
m54284U_201016_223608/154208437/ccs	chr17	-	2900	7	NNC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	204.007080487146	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28637501	28618070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637414
m54284U_201016_223608/154273147/ccs	chr6	-	185	1	Antisense	novelGene_ENSMUSG00000052337.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCTTGGGTTAAATTC	NA	False	NA	NA	False	NA	NA	NA	71842679	71842494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_71842500_71842700
m54284U_201016_223608/154273905/ccs	chr14	-	2013	5	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	258	junction_4	246.406549223027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168313	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_51165495_51166277_51166369_51166462_51167148_51167590_51167782_51168090
m54284U_201016_223608/154405186/ccs	chr17	+	3069	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_7	453.255758068469	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003926_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
m54284U_201016_223608/154405430/ccs	chr10	-	178	1	Intergenic	novelGene_5417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTCAAATAGAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	75798683	75798505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75798500_75798700
m54284U_201016_223608/154534420/ccs	chr15	+	3753	17	ISM	ENSMUSG00000022436.17	ENSMUST00000061239.14	1917	18	0	0	0	0	intron_retention	FALSE	canonical	3	401	junction_16	46.1503995107301	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4398	False	NA	87	True	AATAAA	-20	NA	78783967	78796251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207
m54284U_201016_223608/154535217/ccs	chr8	-	1524	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_6	54.6308576927445	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633351	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43618053_43618097_43633233
m54284U_201016_223608/154602182/ccs	chr11	-	172	1	Intergenic	novelGene_6191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTAAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	88719018	88718846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88718800_88719000
m54284U_201016_223608/154602269/ccs	chr6	+	2590	8	NNC	ENSMUSG00000038301.16	novel	2480	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	146.232551723867	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTCGATTTCTTACTT	NA	False	NA	NA	False	ATTAAA	-24	NA	51500880	51567659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_51501015_51538997_51539045_51546778_51546889_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
m54284U_201016_223608/15468436/ccs	chr1	+	182	1	Intergenic	novelGene_471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGAGTTCTGAGGATCT	7939	False	NA	NA	False	NA	NA	NA	171006518	171006700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171006500_171006700
m54284U_201016_223608/154731799/ccs	chr10	+	5207	21	NNC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_15	49.5912290632124	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATTGTTAGTATTTTT	NA	False	NA	22	True	CATAAA	-24	NA	88215087	88283191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272251_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
m54284U_201016_223608/154731886/ccs	chr9	-	175	1	Intergenic	novelGene_5153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAGGATTTGAG	NA	False	NA	NA	False	NA	NA	NA	120528819	120528644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_120528600_120528800
m54284U_201016_223608/154796719/ccs	chr2	+	2811	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	408.12498085758	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405168	27426547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_27405293_27408719_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
m54284U_201016_223608/154862787/ccs	chr15	+	2775	6	ISM	ENSMUSG00000033287.18	ENSMUST00000162517.9	901	8	98	-806	0	0	intron_retention	FALSE	canonical	1	3	junction_5	48.5691259958423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	24	True	AATAAA	-31	NA	78312861	78323503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321357
m54284U_201016_223608/154863112/ccs	chr17	+	2030	10	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	40.6086410557539	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	359	False	NA	17	True	AATAAA	-19	NA	28532545	28545546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
m54284U_201016_223608/154864054/ccs	chr10	-	3415	6	NIC	ENSMUSG00000063804.9	novel	5402	5	NA	NA	0	-2054	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	6.46838465151849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATACTTGTTAGTAACT	NA	False	NA	NA	False	AATAAA	-19	NA	45362491	45254769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_45257528_45295232_45295305_45296619_45296805_45345132_45345315_45352443_45352493_45362322
m54284U_201016_223608/154993438/ccs	chr3	-	4624	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_24	121.663180954634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069723	100045495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_100046159_100046374_100046469_100047494_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
m54284U_201016_223608/154993667/ccs	chr14	+	1294	2	ISM	ENSMUSG00000050222.12	ENSMUST00000089494.6	1274	3	362	0	362	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAAGCCACTGGTCT	NA	False	NA	10	True	ATTAAA	-22	NA	57762595	57780623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_57763057_57779790
m54284U_201016_223608/155123836/ccs	chr3	-	3608	1	Intergenic	novelGene_1340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTCTTCAAGCCTATAT	NA	False	NA	NA	False	AATAAA	-25	NA	8087895	8084287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_8084300_8087900
m54284U_201016_223608/155123892/ccs	chr13	-	144	1	ISM	ENSMUSG00000052909.9	ENSMUST00000171257.4	2904	3	8964	1630	8964	-1630	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAGACACCAAT	NA	False	NA	NA	False	NA	NA	NA	67912606	67912462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_67912500_67912600
m54284U_201016_223608/155125592/ccs	chr7	-	1776	8	ISM	ENSMUSG00000003863.19	ENSMUST00000211067.2	4565	30	23041	0	-2513	0	3prime_fragment	FALSE	canonical	3	8	junction_7	19.3422451897289	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	4473	False	NA	-2	True	NA	NA	NA	44993097	44988549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991749_44991926_44992976
m54284U_201016_223608/155126270/ccs	chr4	+	183	1	Intergenic	novelGene_2118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	126534837	126535020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126534800_126535000
m54284U_201016_223608/155190259/ccs	chr9	+	1545	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	849.465858582886	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_64189269_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
m54284U_201016_223608/155190906/ccs	chr6	+	892	4	NNC	ENSMUSG00000029761.17	novel	4096	13	NA	NA	0	4706	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	100.677703589226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGCTGAATGTGGTGG	1305	False	NA	NA	False	ATTAAA	-22	NA	34686424	34723849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_34686633_34718723_34718871_34722553_34722951_34723709
m54284U_201016_223608/155386618/ccs	chr11	-	1963	12	NIC	ENSMUSG00000069855.10	novel	2377	17	NA	NA	5532	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	5.65393156562408	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTGTGCTGAGAATAT	NA	False	NA	NA	False	AATAAA	-13	NA	61227878	61192456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61227640
m54284U_201016_223608/155386791/ccs	chr1	+	1427	4	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	20058	junction_2	1765.57494570151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_86454673_86456894_86457275_86457452_86457527_86457686
m54284U_201016_223608/155451454/ccs	chr10	-	2389	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	144.203246804255	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417405	116321070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385081_116417357
m54284U_201016_223608/155452772/ccs	chr5	-	2495	6	NIC	ENSMUSG00000036285.11	novel	2288	7	NA	NA	-339	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	53.9013914477168	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCCATGTATCTGTGA	NA	False	NA	69	True	AATAAA	-14	NA	77458270	77442028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_77442404_77444932_77445051_77447504_77447622_77454120_77454324_77455399_77455565_77456753
m54284U_201016_223608/155518306/ccs	chr19	-	3218	25	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	0	-154	combination_of_known_junctions	FALSE	canonical	1	3	junction_10	231.467585323638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340010	37247982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37267442_37267588_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
m54284U_201016_223608/155519054/ccs	chr19	-	176	1	Intergenic	novelGene_9257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATACTTTATAAA	NA	False	NA	NA	False	NA	NA	NA	41454912	41454736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_41454700_41454900
m54284U_201016_223608/155582604/ccs	chr1	+	219	1	Intergenic	novelGene_440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTGGAGCAGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	163846849	163847068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_163846800_163847100
m54284U_201016_223608/155582680/ccs	chrX	+	7271	39	NNC	ENSMUSG00000031314.19	novel	7331	39	NA	NA	-5108	0	intron_retention	FALSE	canonical	3	40	junction_1	61.923395620781	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGAGTGATTTTAAGTAG	NA	False	NA	NA	False	AATAAA	-24	NA	100571231	100644640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_100571348_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
m54284U_201016_223608/155583734/ccs	chr18	+	2555	3	NIC	ENSMUSG00000046668.10	novel	2302	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	329	junction_2	30	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35962840	35994741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35963293_35991445_35992510_35993702
m54284U_201016_223608/155649430/ccs	chr16	-	2637	1	Intergenic	novelGene_8024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAAAAGGATGT	NA	False	NA	NA	False	NA	NA	NA	3579151	3576514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_3576500_3579200
m54284U_201016_223608/155649966/ccs	chr17	-	2592	21	NIC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	0	-196	intron_retention	FALSE	canonical	3	500	junction_13	41.3413836246442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGGTTTCTCATGTGA	NA	False	NA	-27	True	NA	NA	NA	24926605	24919627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
m54284U_201016_223608/155714921/ccs	chrX	-	3742	14	NIC	ENSMUSG00000031392.19	novel	3835	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_3	98.3373014276424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	False	NA	-12	True	NA	NA	NA	73067524	73057531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_73059108_73060153_73060304_73060735_73061037_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
m54284U_201016_223608/155781143/ccs	chr13	-	4905	38	NNC	ENSMUSG00000021375.12	novel	3426	26	NA	NA	-71	-9364	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	16.9234515990337	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGCCAGTTTTTCAAA	NA	False	NA	-17	True	AATAAA	-24	NA	47083265	46913352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_46913548_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47018294_47018308_47082691_47082783_47083042
m54284U_201016_223608/155845147/ccs	chr12	-	177	1	Intergenic	novelGene_6622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	40629482	40629305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_40629300_40629500
m54284U_201016_223608/155846519/ccs	chr5	-	2150	5	NIC	ENSMUSG00000001847.15	novel	2325	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	533.751580793912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGGTTATGCTTGTGT	3466	False	NA	-9	True	AATAAA	-13	NA	143513748	143491236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_143492861_143493081_143493242_143493850_143493914_143502912_143502985_143513517
m54284U_201016_223608/155846695/ccs	chr2	+	1540	8	NIC	ENSMUSG00000026975.11	novel	1666	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	37.5004761874528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTATGCATCTGTCT	NA	False	NA	36	True	ATTAAA	-39	NA	24852452	24862175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_24852638_24853034_24853169_24855568_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
m54284U_201016_223608/155847133/ccs	chr2	-	4353	5	NIC	ENSMUSG00000027547.18	novel	5073	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_3	240.637694470339	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGGCTTGTGTGTATGCT	NA	False	NA	-17	True	AATAAA	-22	NA	168609037	168590251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_168592381_168594373_168594661_168596353_168597050_168597685_168598721_168608831
m54284U_201016_223608/155911175/ccs	chr14	-	2556	11	NNC	ENSMUSG00000021982.15	novel	2202	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	42.8579047551324	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACAAATAAAATGTTA	NA	False	NA	-32	True	NA	NA	NA	59835395	59801424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59822250_59822603_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
m54284U_201016_223608/155976853/ccs	chr1	+	1605	3	NIC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	20695	junction_1	1693	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_86454673_86456894_86457527_86457686
m54284U_201016_223608/15598298/ccs	chr10	+	6709	1	Antisense	novelGene_ENSMUSG00000020166.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGCTTCAGCAATAAA	4629	False	NA	NA	False	AATATA	-2	NA	116382260	116388969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_116382300_116389000
m54284U_201016_223608/15599145/ccs	chr5	-	2325	16	NIC	ENSMUSG00000029472.14	novel	2760	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	550.492611717501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGAAGTGGGTTTTTTT	NA	False	NA	-23	True	AATAAA	-16	NA	122959357	122925789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
m54284U_201016_223608/15599467/ccs	chrX	-	1334	8	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	50	-78	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	38.4819066946681	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTAAGATTCTGTAA	NA	False	NA	-5	True	AATAAA	-15	NA	20797744	20791770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_20791999_20793519_20793632_20793773_20793963_20794566_20794759_20794881_20795053_20795834_20796011_20797390_20797542_20797629
m54284U_201016_223608/15599820/ccs	chr4	-	2011	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	219	junction_7	24.6915667665654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952980	147945247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
m54284U_201016_223608/156043597/ccs	chr4	-	170	1	Intergenic	novelGene_1831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCTTTTTAAAAAAAATGAA	5531	False	NA	NA	False	NA	NA	NA	43528809	43528639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_43528600_43528800
m54284U_201016_223608/156043674/ccs	chr14	-	1647	7	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	298.976030254378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168313	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_51165495_51166277_51166369_51166462_51166516_51166626_51166765_51167040_51167148_51167590_51167782_51168069
m54284U_201016_223608/156106829/ccs	chr4	+	3366	16	NNC	ENSMUSG00000028423.16	novel	3617	16	NA	NA	66	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_15	149.55756974044	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTCTTGTCAGGCTA	-20	True	NA	16	True	NA	NA	NA	40970971	41012608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011711
m54284U_201016_223608/156173549/ccs	chr7	-	3316	8	NIC	ENSMUSG00000030452.17	novel	3925	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	93.4351242787186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	False	NA	-20	True	AATAAA	-16	NA	55612216	55581034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55594706_55594834_55611199_55611321_55611947
m54284U_201016_223608/156173774/ccs	chr2	-	1161	9	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	40.6799628195504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATGATTTGATCCAAAA	8853	False	NA	-7	True	ATTAAA	-20	NA	93841097	93810981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
m54284U_201016_223608/156239411/ccs	chr10	-	171	1	Intergenic	novelGene_5524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGAAGAAGAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	98745484	98745313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_98745300_98745500
m54284U_201016_223608/156304350/ccs	chr17	+	2710	9	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	25	junction_1	108.366277042261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATATGTGATATACTAT	NA	False	NA	11	True	AATAAA	-19	NA	26357661	26414785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26358016_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
m54284U_201016_223608/156305427/ccs	chr17	-	1616	4	NIC	ENSMUSG00000039615.10	novel	1498	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1486	junction_1	43.1457478270519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6753	False	NA	-19	True	AATAAA	-15	NA	26051927	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26049985_26050075_26050606_26050769_26051219_26051665
m54284U_201016_223608/156370323/ccs	chr5	+	7139	23	NIC	ENSMUSG00000057406.17	novel	7142	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	54.8431459815812	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTTACACTTATTTAA	NA	False	NA	12	True	ATTAAA	-15	NA	33978068	34055310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
m54284U_201016_223608/156435919/ccs	chr11	+	3079	2	Antisense	novelGene_ENSMUSG00000025576.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGAGTCTCAACTGTTA	9078	False	NA	NA	False	ATTAAA	-19	NA	118442922	118446740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_118443246_118443984
m54284U_201016_223608/156436487/ccs	chr17	+	184	1	Intergenic	novelGene_8625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCTGTTGTTTATGG	2872	False	NA	NA	False	NA	NA	NA	47328487	47328671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47328500_47328700
m54284U_201016_223608/156436881/ccs	chr3	-	2402	2	Antisense	novelGene_ENSMUSG00000074637.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	181	junction_1	0	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTTTTGAACAAGTTAAT	NA	False	NA	NA	False	NA	NA	NA	34706610	34704175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_-_34705642_34705674
m54284U_201016_223608/156501735/ccs	chr6	-	3183	17	NNC	ENSMUSG00000053470.14	novel	4753	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_4	123.284668045139	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71586123	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568976_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
m54284U_201016_223608/156501757/ccs	chr9	+	8282	21	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_13	24.3052977764108	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCCTCAAAATTA	NA	False	NA	20	True	AATAAA	-21	NA	110358263	110447682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_110358374_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
m54284U_201016_223608/156567891/ccs	chr13	-	175	1	Intergenic	novelGene_7086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTGAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	54859802	54859627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_54859600_54859800
m54284U_201016_223608/156631106/ccs	chr1	+	1586	9	NIC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_7	334.131710557379	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACCTAGCATTGA	NA	False	NA	51	True	TATAAA	-11	NA	15875880	15913694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15908405_15908513_15913144
m54284U_201016_223608/15663747/ccs	chr19	-	169	2	Intergenic	novelGene_9356	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	296	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATTAATTAAAAAAAATAG	NA	False	NA	NA	False	NA	NA	NA	61092680	60783278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_60783398_61092630
m54284U_201016_223608/15664897/ccs	chr15	+	161	1	Intergenic	novelGene_7988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTTTTAAAAATTAAAA	3834	False	NA	NA	False	NA	NA	NA	100160810	100160971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_100160800_100161000
m54284U_201016_223608/156697217/ccs	chr3	+	6807	41	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_21	21.0653744329409	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6168	False	NA	12	True	AAGAAA	-13	NA	87524881	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
m54284U_201016_223608/156762949/ccs	chr17	+	208	1	Intergenic	novelGene_8502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATATTTTAAAAGATTTT	NA	False	NA	NA	False	NA	NA	NA	30154664	30154872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_30154700_30154900
m54284U_201016_223608/156764733/ccs	chr1	+	1019	6	NNC	ENSMUSG00000025934.16	novel	1457	7	NA	NA	3342	198	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	18.4867520132661	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCGAACATTGTCATT	NA	False	NA	20	True	AATAAA	-26	NA	21327086	21335443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_21327270_21327554_21327607_21329071_21329205_21330271_21330414_21333016_21333149_21335066
m54284U_201016_223608/156895849/ccs	chr4	+	2504	20	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	123.771570491975	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155709399_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201016_223608/156959829/ccs	chr13	+	4687	9	NIC	ENSMUSG00000037933.17	novel	4588	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	20.4110111214511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCCCTCTGTGATTGC	1428	False	NA	18	True	AATAAA	-25	NA	49495060	49540502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49537813_49537902_49538446
m54284U_201016_223608/156960998/ccs	chr15	-	229	1	Intergenic	novelGene_7695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	39087313	39087084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_39087100_39087300
m54284U_201016_223608/157027050/ccs	chr17	-	2653	9	NNC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	177.430091867191	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	7993	False	NA	-1	True	AATAAA	-19	NA	27423443	27408573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_27409765_27411905_27412009_27412076_27412205_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
m54284U_201016_223608/157091567/ccs	chr1	-	186	1	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGCTAAGGAAAATTACT	NA	False	NA	NA	False	NA	NA	NA	34129727	34129541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_34129500_34129700
m54284U_201016_223608/157091831/ccs	chr11	-	3487	3	Fusion	ENSMUSG00000018931.4_ENSMUSG00000042549.11	novel	4179	3	NA	NA	0	-810	multi-exon	FALSE	canonical	3	4	junction_2	107	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTCTGCTTTTCTCT	NA	False	NA	-1	True	ATTAAA	-22	NA	60822693	60793881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr11_-_60796948_60797707_60797827_60822391
m54284U_201016_223608/157157453/ccs	chr8	+	4391	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_12	46.4396262785231	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645179	18853205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18851421
m54284U_201016_223608/157157751/ccs	chr10	-	1111	2	Intergenic	novelGene_5370	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGACTTTCTTTGTCC	NA	False	NA	NA	False	NA	NA	NA	66810458	66805487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_66806523_66810382
m54284U_201016_223608/157223295/ccs	chr9	+	2549	12	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-407	1098	intron_retention	TRUE	canonical	3	45	junction_1	43.6816053348329	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGTGCACAGTCAGGC	NA	False	NA	21	True	AATAAA	-22	NA	124195419	124202494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
m54284U_201016_223608/157223425/ccs	chr5	+	2812	3	NIC	ENSMUSG00000018604.19	novel	485	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	538	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119818313	119822789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_119818361_119818459_119819131_119820695
m54284U_201016_223608/157288732/ccs	chr1	-	177	1	Intergenic	novelGene_361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATAAAATGTTCA	NA	False	NA	NA	False	NA	NA	NA	139271796	139271619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_139271600_139271800
m54284U_201016_223608/157484158/ccs	chr8	+	3833	20	NIC	ENSMUSG00000031706.8	novel	4172	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	11.873058960768	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACTGATGACGAGAGCA	NA	False	NA	21	True	AATAAA	-17	NA	84793464	84823621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84793678_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
m54284U_201016_223608/157549791/ccs	chr2	+	179	1	Intergenic	novelGene_793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTAAAGCTTCACTC	NA	False	NA	NA	False	NA	NA	NA	52680869	52681048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_52680900_52681000
m54284U_201016_223608/157682401/ccs	chr5	+	901	6	NIC	ENSMUSG00000029344.16	novel	1813	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.943779479539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112424572	112463221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_112424638_112451765_112451838_112457554_112457754_112459549_112459601_112461107_112461157_112462756
m54284U_201016_223608/157745463/ccs	chr8	-	7669	49	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	313	junction_31	292.082375622538	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
m54284U_201016_223608/157746394/ccs	chr16	-	192	1	Intergenic	novelGene_8200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCTTATCTCCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31844231	31844039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31844000_31844200
m54284U_201016_223608/157811565/ccs	chr16	-	3459	9	NIC	ENSMUSG00000022911.12	novel	3528	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	12.6830349285965	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTATCTAATTTTAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	62667403	62614047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_62616072_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
m54284U_201016_223608/157812418/ccs	chr7	+	1694	5	NNC	ENSMUSG00000030876.8	novel	1823	5	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	108.278287297131	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCACCATGTTCTTCT	9553	False	NA	7	True	AATAAA	-16	NA	120633793	120676058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675355
m54284U_201016_223608/157813034/ccs	chr19	-	2960	10	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35314	0	intron_retention	FALSE	canonical	3	31	junction_7	13.1242871646519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	873	False	NA	-2	True	AATAAA	-16	NA	44145567	44136076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44143034_44143886_44144116_44144279_44144505_44145490
m54284U_201016_223608/157813451/ccs	chr11	-	172	1	Intergenic	novelGene_6248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	95982802	95982630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95982600_95982800
m54284U_201016_223608/157944524/ccs	chr16	+	3019	17	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	0	87	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.2833029498811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGTGATACTTTTT	6401	False	NA	11	True	AATAAA	-16	NA	44167776	44207593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_44167870_44175802_44175899_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
m54284U_201016_223608/15795253/ccs	chr6	-	3282	4	NIC	ENSMUSG00000029998.15	novel	4295	6	NA	NA	0	-618	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	84.3972090112516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTCTCTTCTTTTTC	NA	False	NA	-6	True	ATTAAA	-15	NA	86374123	86363605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_86366354_86368657_86368811_86369118_86369331_86373954
m54284U_201016_223608/158139910/ccs	chr17	-	107	1	FSM	ENSMUSG00000119272.1	ENSMUST00000240167.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAGTAAGGGAGAAAG	NA	False	NA	NA	False	NA	NA	NA	13652401	13652294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_13652300_13652400
m54284U_201016_223608/158140943/ccs	chr6	+	3298	12	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-118	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	63.0599871826111	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTGATGTTTTAT	NA	False	NA	6	True	TATAAA	-18	NA	124985989	125014600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
m54284U_201016_223608/158204676/ccs	chr10	+	194	1	Intergenic	novelGene_5332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGACTTCAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	61232849	61233043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61232800_61233000
m54284U_201016_223608/158271826/ccs	chr16	+	5450	33	NNC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_5	371.710567637981	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494512_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201016_223608/158466359/ccs	chr12	+	3696	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	0	131	intron_retention	FALSE	canonical	3	93	junction_10	145.998689322715	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGGTGGGCTCCCTT	3981	False	NA	11	True	TATAAA	-15	NA	83679025	83728925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83722093_83722855_83722955_83724628_83724677_83728276
m54284U_201016_223608/158468106/ccs	chr3	-	202	1	Intergenic	novelGene_1614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCATGGTTTGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	104181967	104181765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_104181800_104182000
m54284U_201016_223608/158534430/ccs	chrX	+	1072	11	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	0	1702	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_10	385.15219069869	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTCATGGTATTTTA	NA	False	NA	16	True	NA	NA	NA	74460305	74499309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466505_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74499157
m54284U_201016_223608/158664554/ccs	chr1	+	4673	14	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	0	-159	intron_retention	FALSE	canonical	3	1145	junction_2	94.9643969411196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220268	151240007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
m54284U_201016_223608/158729322/ccs	chr4	+	183	1	Intergenic	novelGene_1827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAAGCAAGCAAGCAA	2403	False	NA	NA	False	NA	NA	NA	43269587	43269770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_43269600_43269800
m54284U_201016_223608/158729648/ccs	chr14	+	4253	39	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	163.177895633167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201016_223608/158795779/ccs	chr2	+	3679	4	Fusion	ENSMUSG00000078872.10_ENSMUSG00000083317.2	novel	508	4	NA	NA	0	2343	multi-exon	FALSE	canonical	0	0	junction_1	72.866697163763	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGCCTGGTGAGATGGC	NA	False	NA	NA	False	AATAAA	-18	NA	176724447	176781483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_176724562_176776035_176776163_176776368_176776430_176778106
m54284U_201016_223608/158859689/ccs	chr5	+	2688	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	-89	0	intron_retention	FALSE	canonical	3	48	junction_5	515.46545956058	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAGTGATTATTCTGT	2915	False	NA	23	True	AGTAAA	-20	NA	32616406	32650100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32648297
m54284U_201016_223608/158860631/ccs	chr17	-	4242	35	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	69.0126862616715	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035454	80887945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
m54284U_201016_223608/158861505/ccs	chr19	-	2747	10	NNC	ENSMUSG00000013662.7	novel	3771	10	NA	NA	0	257	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	136.12584954218	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCAATTACAGCACTGAA	NA	False	NA	NA	False	ATTAAA	-13	NA	32689720	32649964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675925_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
m54284U_201016_223608/158925769/ccs	chr5	+	3634	19	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	224.162701328001	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201016_223608/159056389/ccs	chr7	-	4935	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	52.8538210539219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTTGCTGGCTGTAT	NA	False	NA	2	True	ATTAAA	-21	NA	115907590	115722719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115769896_115770073_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
m54284U_201016_223608/159057331/ccs	chr19	-	4375	31	NNC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_30	128.22596807546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGTACAGTGTAGTT	4311	False	NA	-9	True	AATAAA	-15	NA	6947182	6931081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944197_6946914
m54284U_201016_223608/159057759/ccs	chr19	-	253	1	Intergenic	novelGene_9209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTGACAAAAATTTCTAT	NA	False	NA	NA	False	NA	NA	NA	30203721	30203468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_30203500_30203700
m54284U_201016_223608/159058616/ccs	chr9	+	181	1	Intergenic	novelGene_4786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	55273262	55273443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_55273300_55273400
m54284U_201016_223608/159124112/ccs	chr5	+	194	2	Intergenic	novelGene_2490	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1084	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTTCTCTCCGAGGCA	NA	False	NA	NA	False	NA	NA	NA	24963761	24995806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_24963804_24995654
m54284U_201016_223608/159124142/ccs	chr3	-	528	3	NNC	ENSMUSG00000106223.2	novel	643	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	5.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGACTTGTTTAACTATT	NA	False	NA	-2	True	AATAAA	-27	NA	41482909	41476638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_41476891_41477364_41477565_41482833
m54284U_201016_223608/159124218/ccs	chrX	+	177	1	Intergenic	novelGene_9391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGTAAAAGAGAT	NA	False	NA	NA	False	NA	NA	NA	12715792	12715969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_12715800_12716000
m54284U_201016_223608/159189394/ccs	chr18	+	4222	12	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	32.497425199977	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATAAAGGTAGTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	53995193	54088620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54086316
m54284U_201016_223608/159319105/ccs	chr1	+	1220	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9439.51567547297	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_86454673_86456894_86456967_86457177_86457279_86457452_86457527_86457686
m54284U_201016_223608/159319458/ccs	chr7	-	185	1	Intergenic	novelGene_4176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATTGCCAAA	2465	False	NA	NA	False	NA	NA	NA	142227510	142227325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_142227300_142227500
m54284U_201016_223608/159383926/ccs	chr11	-	196	1	Intergenic	novelGene_6044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTCATGCCACCACCA	NA	False	NA	NA	False	NA	NA	NA	77387735	77387539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_77387500_77387700
m54284U_201016_223608/159385907/ccs	chr11	-	176	1	Intergenic	novelGene_6372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTTAAAAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	104582622	104582446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_104582400_104582600
m54284U_201016_223608/159451903/ccs	chr5	-	1427	2	NNC	ENSMUSG00000107142.2	novel	420	2	NA	NA	-1201	0	intron_retention	FALSE	canonical	3	94	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTTATGTCTTTTGTC	721	False	NA	2	True	NA	NA	NA	31646493	31643972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_31645334_31646427
m54284U_201016_223608/159515142/ccs	chr15	-	1722	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	86.2554346113913	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGTACTATGACCTG	1363	False	NA	0	True	AATAAA	-31	NA	82223008	82213732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222438_82222516_82222952
m54284U_201016_223608/159515634/ccs	chrX	+	6034	40	NNC	ENSMUSG00000031314.19	novel	7210	38	NA	NA	-5108	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_39	69.217586589162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGAGTGATTTTAAGTAG	NA	False	NA	NA	False	AATAAA	-24	NA	100571231	100644640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
m54284U_201016_223608/159581067/ccs	chr15	-	169	1	Intergenic	novelGene_7969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAATAATTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	99691291	99691122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99691100_99691300
m54284U_201016_223608/159582416/ccs	chr11	-	2779	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	0	-3542	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	20.8862245271854	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCGCTTCCCCTTTTTGT	NA	False	NA	-2	True	AATAAA	-20	NA	107361525	107102259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
m54284U_201016_223608/159712365/ccs	chr5	+	2485	7	NNC	ENSMUSG00000008090.15	novel	2318	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	38.2044936274954	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108842095	108854790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108842255_108842760_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
m54284U_201016_223608/159713217/ccs	chrX	+	4786	13	NNC	ENSMUSG00000037315.16	novel	2472	10	NA	NA	-339	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	41.5759011394288	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	9	True	ATTAAA	-17	NA	20291587	20386178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20291651_20295261_20295371_20301449_20301538_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
m54284U_201016_223608/159713759/ccs	chr2	+	4471	4	NIC	ENSMUSG00000027424.12	novel	2840	5	NA	NA	79	0	intron_retention	FALSE	canonical	3	360	junction_1	72.2403396079134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGTCTTTCAGTGGACC	NA	False	NA	14	True	AATAAA	-16	NA	144112939	144122436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_144112993_144113834_144114405_144118234_144121047_144121400
m54284U_201016_223608/159777791/ccs	chr3	+	158	1	Intergenic	novelGene_1386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	36110699	36110857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_36110700_36110900
m54284U_201016_223608/159908056/ccs	chr4	+	4789	1	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	828	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAAGAAGAAATTA	-8	True	NA	NA	False	NA	NA	NA	34614960	34619749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_34615000_34619700
m54284U_201016_223608/159910455/ccs	chrX	+	1735	2	NIC	ENSMUSG00000008035.13	novel	2022	2	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGGACAAGTGTG	1562	False	NA	NA	False	AATAAA	-15	NA	10583711	10585929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_10583740_10584222
m54284U_201016_223608/159910502/ccs	chr8	-	879	7	NIC	ENSMUSG00000052926.17	novel	1006	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	423.006468298325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	8253	False	NA	-8	True	AATAAA	-14	NA	85692670	85684295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85691759_85691848_85691945_85692073_85692199_85692272_85692488
m54284U_201016_223608/159910573/ccs	chr8	+	991	6	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	109	junction_2	378.03089820807	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026551	86034700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_86026622_86027737_86027868_86029990_86030081_86031837_86031951_86032845_86032948_86034214
m54284U_201016_223608/15992601/ccs	chrX	+	3494	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3075	junction_4	295.922979844418	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
m54284U_201016_223608/160040949/ccs	chr8	-	186	1	Antisense	novelGene_ENSMUSG00000061048.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTGAAAAGAACAATTT	9110	False	NA	NA	False	NA	NA	NA	107284092	107283906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_107283900_107284100
m54284U_201016_223608/160041546/ccs	chr7	+	1017	6	NNC	ENSMUSG00000025470.12	novel	1076	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_4	120.382058463876	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATCTGTTCTTCTTCATG	NA	False	NA	19	True	AATAAA	-16	NA	139616324	139620515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617495_139619238_139619359_139620155
m54284U_201016_223608/160041654/ccs	chr18	-	4362	23	NIC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_22	88.4667024253562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681766	62637225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62677889_62677998_62681682
m54284U_201016_223608/160235858/ccs	chr4	+	2675	7	NNC	ENSMUSG00000078532.10	novel	1202	7	NA	NA	0	1463	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	31.3975405972435	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTATCTGTCTTGC	NA	False	NA	11	True	ATTAAA	-17	NA	130297196	130341107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130297542_130332055_130332194_130333903_130333985_130337200_130337399_130338581_130338643_130339094_130339171_130339331
m54284U_201016_223608/160236191/ccs	chr4	+	3921	11	NNC	ENSMUSG00000028683.15	novel	3754	10	NA	NA	0	321	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	193.1	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTCTTTTTGTTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	116876604	116930778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116928138
m54284U_201016_223608/160236668/ccs	chr7	-	3349	5	ISM	ENSMUSG00000059975.16	ENSMUST00000108212.8	2060	7	0	2277	0	-301	5prime_fragment	FALSE	canonical	2	4	junction_4	20.9568008054665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGTCTATTTTCTTTTA	5378	False	NA	-8	True	AATAAA	-14	NA	29643180	29632516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642966_29643056
m54284U_201016_223608/160237597/ccs	chr2	-	7687	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39377	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_32	39.1168067136627	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1547	False	NA	-4	True	AATAAA	-19	NA	59881037	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59880905
m54284U_201016_223608/160301321/ccs	chr12	+	3281	16	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	126.053251533716	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	736	False	NA	NA	False	ATTAAA	-21	NA	111540956	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
m54284U_201016_223608/160302101/ccs	chr5	-	2578	14	NNC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_12	405.416244569636	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782465	24770342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781507_24781726_24782344
m54284U_201016_223608/160433748/ccs	chr10	+	1313	16	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	35	junction_5	641.6635532392	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309087	111332745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111325899_111326274_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
m54284U_201016_223608/160434069/ccs	chr13	+	2776	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	264.208800004845	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	54225887	54262361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_54225945_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
m54284U_201016_223608/160498415/ccs	chr4	+	4307	23	NIC	ENSMUSG00000059810.19	novel	2072	18	NA	NA	-92	0	combination_of_known_junctions	TRUE	canonical	2	39	junction_18	14.1957973061405	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTATTCCTGGT	NA	False	NA	1	True	AATAAA	-21	NA	62501745	62621255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_62501951_62521157_62521209_62523724_62523784_62524743_62524839_62525845_62525915_62533537_62533599_62534710_62534802_62535311_62535368_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
m54284U_201016_223608/160564267/ccs	chr16	+	5242	30	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	358.114354091568	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201016_223608/16057241/ccs	chr3	-	191	1	Intergenic	novelGene_1409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGCTGGAAAGACAAAAC	NA	False	NA	NA	False	NA	NA	NA	53667944	53667753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_53667800_53667900
m54284U_201016_223608/160629600/ccs	chr3	+	3805	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	22.3489160462629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067804	95081335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
m54284U_201016_223608/160630753/ccs	chr6	-	6813	13	NNC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	4212	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	80.9252055226855	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	112673631	112592598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663699_112663748_112664937_112665000_112670429_112670512_112673504
m54284U_201016_223608/160631265/ccs	chr8	-	1900	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	-336	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	849.435378485157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337722	26307349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_26307537_26307622_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
m54284U_201016_223608/160696890/ccs	chr11	+	4286	23	NNC	ENSMUSG00000020456.18	novel	702	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	148.169108490076	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241984	6306642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_6242205_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
m54284U_201016_223608/160762429/ccs	chr17	-	2575	21	NIC	ENSMUSG00000040688.17	novel	5226	22	NA	NA	0	-193	intron_retention	FALSE	canonical	3	500	junction_13	39.931034296647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCTCATGTGAATC	NA	False	NA	-24	True	NA	NA	NA	24926605	24919624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
m54284U_201016_223608/160827852/ccs	chr4	+	189	1	Intergenic	novelGene_1780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAAAATTCCAGGCTAT	NA	False	NA	NA	False	NA	NA	NA	32778545	32778734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_32778500_32778700
m54284U_201016_223608/160893434/ccs	chr16	-	3463	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_16	54.027177886812	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201016_223608/160893445/ccs	chr7	+	2159	15	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	0	0	intron_retention	TRUE	canonical	3	180	junction_5	20.6265382852444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGAAGTGCTGGCTG	268	False	NA	25	True	AATAAA	-33	NA	28441416	28453296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
m54284U_201016_223608/160893544/ccs	chr15	+	2244	14	NNC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	531.293408947008	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	195	False	NA	28	True	AATAAA	-14	NA	38662187	38692687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_38662328_38673100_38673265_38674140_38674209_38674873_38675061_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
m54284U_201016_223608/160957421/ccs	chr10	+	1253	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	106	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	1174.6459986831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTTTATGATTTCTT	51	False	NA	17	True	AATAAA	-17	NA	81395321	81401997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400646_81400745_81401125_81401201_81401305
m54284U_201016_223608/161024045/ccs	chr11	+	173	1	Intergenic	novelGene_6099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTTTTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	79940683	79940856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79940700_79940900
m54284U_201016_223608/161024126/ccs	chr3	-	1306	12	NIC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	248.823878102664	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
m54284U_201016_223608/161088018/ccs	chr4	+	4470	15	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	92.0617860405695	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTATGTGTGTAACCAT	-33	True	NA	33	True	AATAAA	-33	NA	53440412	53567818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
m54284U_201016_223608/161089041/ccs	chr6	-	2439	22	NIC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_9	215.718732215289	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
m54284U_201016_223608/161154159/ccs	chr8	-	100	1	Intergenic	novelGene_4610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGTTTATTAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	127230177	127230077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_127230100_127230200
m54284U_201016_223608/161155862/ccs	chr12	+	3524	11	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	707.608853816853	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504649	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509533_111509699_111509960_111510096_111510962
m54284U_201016_223608/161220344/ccs	chr18	+	3290	19	NIC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	50.9122944719157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3245	False	NA	9	True	ATTAAA	-31	NA	11790439	11875935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853566_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
m54284U_201016_223608/161220640/ccs	chrX	-	157	1	Intergenic	novelGene_9695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAGAAACAAATTTCA	NA	False	NA	NA	False	NA	NA	NA	156387336	156387179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_156387200_156387300
m54284U_201016_223608/161220998/ccs	chr4	+	2706	11	NNC	ENSMUSG00000028890.14	novel	7631	11	NA	NA	0	-4468	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	26.0967430918113	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTACTGCCCATCATT	352	False	NA	28	True	CATAAA	-32	NA	124696374	124738704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736323_124736385_124737939
m54284U_201016_223608/161221320/ccs	chr19	+	2750	9	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	204	junction_1	54.1548705104167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043484	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38043530_38045857_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201016_223608/161221399/ccs	chr12	-	4664	9	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	442	junction_4	59.9404652551179	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771647	69737206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
m54284U_201016_223608/16123890/ccs	chr9	+	2013	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_14	224.417534056136	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904139	86959434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86958880
m54284U_201016_223608/161285959/ccs	chr6	+	2992	18	NIC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	0	-292	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	151.620063311608	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCTGTGAAATAATTCT	NA	False	NA	14	True	AATAAA	-16	NA	52690747	52743473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_52690874_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
m54284U_201016_223608/161286566/ccs	chrX	-	203	1	Intergenic	novelGene_9477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAGTAACATTTCA	NA	False	NA	NA	False	NA	NA	NA	57104497	57104294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_57104300_57104500
m54284U_201016_223608/161415693/ccs	chr7	-	2214	11	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24742	-254	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_10	22.2216111027081	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATTCATGTGTGTTTT	NA	False	NA	-1	True	CATAAA	-37	NA	26410604	26364905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26389739_26389834_26390877_26390954_26410317
m54284U_201016_223608/161416428/ccs	chr4	+	3444	13	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	-136	0	intron_retention	FALSE	canonical	2	62	junction_6	14.1598022585063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692393	117726502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
m54284U_201016_223608/161417072/ccs	chr9	+	1675	8	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-377	-1824	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	92.9191002091253	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATATTTCAGTATACT	NA	False	NA	NA	False	NA	NA	NA	110789524	110811310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_110789646_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
m54284U_201016_223608/161547582/ccs	chr9	+	1428	12	NNC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	96.9895623591094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818268	57837251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_57818291_57818992_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
m54284U_201016_223608/161548509/ccs	chr10	+	176	1	Intergenic	novelGene_5467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGGTATTTTCCTCAT	6224	False	NA	NA	False	NA	NA	NA	81274462	81274638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_81274500_81274600
m54284U_201016_223608/161548894/ccs	chr4	-	1961	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	343.341753942045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9570	False	NA	NA	False	ATTAAA	-14	NA	117146643	117128660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146395
m54284U_201016_223608/161548975/ccs	chr11	-	1138	7	NNC	ENSMUSG00000018442.14	novel	3666	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_6	196.977508586358	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	False	NA	-9	True	AATAAA	-20	NA	70910095	70900758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909201_70909969
m54284U_201016_223608/161678028/ccs	chr4	+	1629	6	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_2	295.098220936691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3203	False	NA	16	True	AATAAA	-16	NA	129494499	129502321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129494525_129494775_129494928_129495199_129495419_129495987_129496055_129500879_129500973_129501248
m54284U_201016_223608/161744490/ccs	chr15	-	1418	6	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	99.9551899603017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTTTGTATTTGATT	NA	False	NA	-5	True	AATGAA	-40	NA	27630779	27606004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630539
m54284U_201016_223608/161744773/ccs	chr8	+	2921	25	NIC	ENSMUSG00000031930.12	novel	4314	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	187.153898161973	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCTGTTGCAAAGCCAGA	NA	False	NA	11	True	AATAAA	-22	NA	108163047	108283845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_108163074_108178219_108178260_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
m54284U_201016_223608/161809716/ccs	chr7	-	2403	10	NIC	ENSMUSG00000038187.15	novel	2581	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_7	47.410734836931	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGACCAACTTTATGA	NA	False	NA	-16	True	AATAAA	-17	NA	112968543	112914849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112964111_112964177_112968078_112968166_112968405
m54284U_201016_223608/161810289/ccs	chr10	+	2257	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_5	103.891636921468	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144353	44240287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44222952_44223071_44238911
m54284U_201016_223608/161874421/ccs	chr11	-	1596	7	NNC	ENSMUSG00000020358.18	novel	2013	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	343	junction_1	1043.14630911595	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTAAATGTGGGATG	NA	False	NA	-17	True	AATAAA	-22	NA	51497674	51491695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_51492301_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
m54284U_201016_223608/16189106/ccs	chr3	+	5073	13	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-664	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	21.8649580125115	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84721910	84886505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_84723077_84771270_84771319_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
m54284U_201016_223608/16189657/ccs	chr13	-	2538	11	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	474.906148623073	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259677	47238257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251791_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
m54284U_201016_223608/161940814/ccs	chr14	-	200	1	Intergenic	novelGene_7515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGTGTTGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	65344745	65344545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_65344500_65344700
m54284U_201016_223608/161941075/ccs	chr12	+	3178	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7377	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	43.9365072196991	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066204	81233188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_81066271_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
m54284U_201016_223608/161941400/ccs	chr18	+	3797	4	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	1773	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	94.6232294711798	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACACGAAGGTGTCGTCT	NA	False	NA	10	True	ATTAAA	-17	NA	82990900	83021598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_82990974_83004868_83006324_83012594_83012663_83019397
m54284U_201016_223608/162006042/ccs	chr5	+	3246	25	NIC	ENSMUSG00000042719.18	novel	5447	24	NA	NA	0	207	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	112.146822167292	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGCAGGACCCTCATC	NA	False	NA	28	True	ATTAAA	-33	NA	121536057	121578201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121567395_121567525_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
m54284U_201016_223608/162007028/ccs	chr8	+	190	1	Intergenic	novelGene_4368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTCAGGCCAGTCTGCA	897	False	NA	NA	False	NA	NA	NA	84947896	84948086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_84947900_84948100
m54284U_201016_223608/162070609/ccs	chr12	+	2237	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	-51	intron_retention	FALSE	canonical	3	5416	junction_8	310.666119008816	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758239	24764094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762974_24763078
m54284U_201016_223608/162072301/ccs	chr10	-	2624	14	NNC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	12	junction_2	61.0739197091447	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390955	79376079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_79377034_79377347_79377769_79378211_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
m54284U_201016_223608/162202684/ccs	chr3	+	2411	6	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	4254	junction_2	529.439930492591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGCTGGTTATTTTCT	NA	False	NA	27	True	AATAAA	-27	NA	121220145	121251856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245649_121248595_121248743_121250730
m54284U_201016_223608/162269860/ccs	chr16	-	153	1	Intergenic	novelGene_8252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAACAAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	38151816	38151663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_38151700_38151800
m54284U_201016_223608/162335066/ccs	chr3	-	3719	6	NNC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_2	35.9254784240934	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGTAATTTTTATTTC	9443	False	NA	-22	True	TATAAA	-27	NA	87837451	87830964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_87831220_87831650_87831836_87832248_87832739_87834037_87834182_87834361_87834425_87834869
m54284U_201016_223608/162400709/ccs	chr6	+	6513	39	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_25	118.681832745466	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1789	False	NA	14	True	AATAAA	-18	NA	125073124	125107554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097170_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
m54284U_201016_223608/162532056/ccs	chr1	-	193	1	Intergenic	novelGene_539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAAGAAAGCATTTA	NA	False	NA	NA	False	NA	NA	NA	185031742	185031549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_185031500_185031700
m54284U_201016_223608/162661916/ccs	chr1	-	903	5	NNC	ENSMUSG00000026281.16	novel	1003	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	883.642284807602	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGCTTTGGTTCTGCCCCT	2338	False	NA	-20	True	AATAAA	-24	NA	93729628	93720297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_93720666_93722447_93722574_93726101_93726193_93728523_93728633_93729419
m54284U_201016_223608/162726640/ccs	chr10	+	4444	17	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	50.6098742835823	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCTCCGGTGACTTA	5000	False	NA	NA	False	AATAAA	-16	NA	81128821	81155807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153599
m54284U_201016_223608/162794162/ccs	chr2	+	193	1	Intergenic	novelGene_634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGAGTCCTGGTGGTTC	NA	False	NA	NA	False	NA	NA	NA	25149923	25150116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_25149900_25150100
m54284U_201016_223608/162857648/ccs	chr18	+	3937	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	3711	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	426.688236551083	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35686462	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690445_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
m54284U_201016_223608/162858563/ccs	chr16	+	4344	12	NIC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	44.2104284470426	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005440	33063682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
m54284U_201016_223608/162990512/ccs	chr3	+	3314	14	NIC	ENSMUSG00000038354.14	novel	3295	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	34.4249462320121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTATTGTTGTGGTTTTTG	467	False	NA	16	True	AATAAA	-16	NA	96577642	96598348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507_96597613_96598154
m54284U_201016_223608/163054358/ccs	chrX	+	3252	23	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	0	-584	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	134.849288387119	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATACCTGAGCCTCAACC	NA	False	NA	9	True	AATAAA	-22	NA	100683699	100725962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100683717_100683823_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
m54284U_201016_223608/163054469/ccs	chr17	+	2162	21	NNC	ENSMUSG00000007036.16	novel	1945	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	48.0332176727731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTATGAGATGT	NA	False	NA	32	True	AATAAA	-19	NA	35308238	35321963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35310794_35310984_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
m54284U_201016_223608/163120784/ccs	chr14	+	1391	5	NIC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	75.1182401284801	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTACCAGCCTTTGC	NA	False	NA	9	True	AATAAA	-21	NA	3576002	3896121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_3576112_3581246_3581431_3839264_3839398_3882697_3882846_3895304
m54284U_201016_223608/163120870/ccs	chr13	-	2316	16	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_15	1977.57133429422	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
m54284U_201016_223608/16318555/ccs	chr8	-	1972	2	ISM	ENSMUSG00000074240.6	ENSMUST00000211946.2	2014	4	5399	0	5381	0	3prime_fragment	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGATCTCTGCCTTTTGC	NA	False	NA	NA	False	AATAAA	-18	NA	72961282	72958178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_72958275_72959406
m54284U_201016_223608/163185775/ccs	chr4	+	1602	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_1	65.4017412237781	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569696	149581125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_149570050_149570318_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
m54284U_201016_223608/163186945/ccs	chr14	-	183	1	Intergenic	novelGene_7470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCAAGTTTGGGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	55796308	55796125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_55796100_55796300
m54284U_201016_223608/16319694/ccs	chr9	+	193	1	Intergenic	novelGene_4776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGAAGGAGAGGACTGG	NA	False	NA	NA	False	NA	NA	NA	54654601	54654794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_54654600_54654800
m54284U_201016_223608/16320236/ccs	chr2	-	175	1	Intergenic	novelGene_1016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGAAGGGTGGCAGG	9630	False	NA	NA	False	NA	NA	NA	120279438	120279263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_120279300_120279400
m54284U_201016_223608/163251097/ccs	chrX	+	1380	13	NNC	ENSMUSG00000001962.9	novel	1383	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_5	234.580521001496	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAAGAACCTGCGCTTTA	199	False	NA	NA	False	AATAAA	-33	NA	73356638	73363755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361245_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
m54284U_201016_223608/163251153/ccs	chr9	+	189	1	Intergenic	novelGene_5134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGCAGTGGTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	114825350	114825539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_114825400_114825500
m54284U_201016_223608/163251573/ccs	chr4	+	2851	12	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_10	132.529803290922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-4	True	NA	13	True	AATAAA	-25	NA	21848054	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873588_21874673_21874912
m54284U_201016_223608/163252929/ccs	chr1	-	1282	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	313.343653036022	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCACGTGAAATTGTCCT	NA	False	NA	-25	True	AATAAA	-2	NA	10108170	10095067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107886
m54284U_201016_223608/163253024/ccs	chr14	-	1490	9	NIC	ENSMUSG00000022177.10	novel	1587	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	152.528224847075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGTCATTTTTCCT	NA	False	NA	-1	True	AATAAA	-20	NA	54791818	54779241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
m54284U_201016_223608/163253028/ccs	chr9	+	3142	5	NIC	ENSMUSG00000032567.17	novel	2755	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_3	13.5092560861063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105272590	105282666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105280791_105282197
m54284U_201016_223608/163381854/ccs	chr10	+	1677	9	NNC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	429.244230450451	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4834	False	NA	29	True	ATTAAA	-17	NA	80634513	80640758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80634586_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
m54284U_201016_223608/163383837/ccs	chr5	-	1030	4	NIC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	238.844905511692	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	7978	False	NA	-2	True	AATAAA	-22	NA	114266279	114261986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_114262316_114263592_114263792_114265586_114265831_114266021
m54284U_201016_223608/163447322/ccs	chr6	-	2399	8	NIC	ENSMUSG00000029817.12	novel	2090	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	123	junction_7	139.301024799547	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTTG	4590	False	NA	-4	True	AATAAA	-15	NA	49240967	49220857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49230043_49240771
m54284U_201016_223608/163447351/ccs	chr7	-	1176	5	NIC	ENSMUSG00000070371.12	novel	3028	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	30.0863341070327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534691	127531809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_127532287_127532542_127532665_127532738_127533005_127533561_127533800_127534618
m54284U_201016_223608/163514380/ccs	chr19	+	2239	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_14	167.763803836081	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352190	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
m54284U_201016_223608/163645250/ccs	chr14	-	2172	9	NNC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	72.2253418129676	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063620	58044017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_58044989_58045431_58045536_58047399_58047513_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
m54284U_201016_223608/163645251/ccs	chr3	+	7555	32	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	88.6012944942465	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88742537	88817405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
m54284U_201016_223608/163646030/ccs	chr8	+	2452	8	NIC	ENSMUSG00000008129.15	novel	2366	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	5.99659767480439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGATCTGTAGCTGTG	1883	False	NA	5	True	AATAAA	-15	NA	84874653	84899219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84875028_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
m54284U_201016_223608/163646303/ccs	chr7	+	4927	14	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_13	26.7477809730499	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311774	118336247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118334490
m54284U_201016_223608/163710013/ccs	chr9	-	1107	5	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	189.758234340436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	7868	False	NA	-6	True	AATAAA	-22	NA	106563126	106535950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_106536507_106539558_106539728_106550715_106550938_106562127_106562195_106563033
m54284U_201016_223608/163774755/ccs	chr13	+	983	10	NIC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	409	junction_5	30.3205101100449	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	False	NA	10	True	AATAAA	-21	NA	104365475	104386125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
m54284U_201016_223608/163841625/ccs	chr17	-	1793	7	NIC	ENSMUSG00000061232.17	novel	1619	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_6	25.5907969568923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTCACTATGCTGTGT	NA	False	NA	-11	True	AATAAA	-25	NA	34219279	34214997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218978_34219167
m54284U_201016_223608/16384777/ccs	chr8	-	4284	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_16	232.071469939248	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
m54284U_201016_223608/16385404/ccs	chr10	-	1111	5	NNC	ENSMUSG00000020029.7	novel	3210	5	NA	NA	0	-2102	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_2	214.72307747422	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGATGCCAAAGCC	NA	False	NA	-16	True	AATAAA	-19	NA	95400008	95384970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
m54284U_201016_223608/163906399/ccs	chrX	+	1524	11	NIC	ENSMUSG00000031105.17	novel	1760	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.2180673730426	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGACTTTGTCTTCA	NA	False	NA	14	True	ATTAAA	-17	NA	47712289	47751171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_47712386_47712550_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
m54284U_201016_223608/163908387/ccs	chr14	-	3414	3	NNC	ENSMUSG00000021752.15	novel	3052	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	103.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAAAGGTTGTATTTA	NA	False	NA	NA	False	AATAAA	-13	NA	14255633	14246211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_14247587_14249552_14249623_14253664
m54284U_201016_223608/1639348/ccs	chr7	+	3984	5	NNC	ENSMUSG00000109176.2	novel	2801	5	NA	NA	-166	0	intron_retention	FALSE	canonical	2	12	junction_3	9.01041064547005	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAATATAGTGGAGCTG	2988	False	NA	30	True	AATAAA	-41	NA	6980078	6994086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_6980472_6984231_6984357_6985317_6985372_6987994_6989202_6991881
m54284U_201016_223608/163973534/ccs	chr15	-	1651	11	NNC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	0	-83	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	1800.99954469733	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	NA	False	NA	-30	True	AATAAA	-45	NA	31601886	31591028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_31591202_31592485_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
m54284U_201016_223608/163973846/ccs	chr7	+	180	1	Intergenic	novelGene_3911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTAAAAGGAGG	6113	False	NA	NA	False	NA	NA	NA	79817356	79817536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79817400_79817500
m54284U_201016_223608/1640263/ccs	chr17	+	269	1	Intergenic	novelGene_8764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTAATTCTAGATGAA	NA	False	NA	NA	False	NA	NA	NA	85136481	85136750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_85136500_85136800
m54284U_201016_223608/164169522/ccs	chr17	+	1115	8	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	734.648576267759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47679880_47681188_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
m54284U_201016_223608/164170121/ccs	chr5	-	202	1	Intergenic	novelGene_2738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTAAAGGAAACCGGTAG	NA	False	NA	NA	False	NA	NA	NA	108136339	108136137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108136100_108136300
m54284U_201016_223608/164233430/ccs	chr12	-	2463	2	NNC	ENSMUSG00000112980.2	novel	2941	2	NA	NA	0	-439	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGTGTCTCGC	NA	False	NA	2	True	NA	NA	NA	116368830	116366005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_116368264_116368625
m54284U_201016_223608/164234784/ccs	chr15	+	2248	2	NNC	ENSMUSG00000044250.9	novel	2185	6	NA	NA	15477	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTCCAAAAGTGGTTC	NA	False	NA	14	True	AATAAA	-15	NA	97274574	97283561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_97275170_97281908
m54284U_201016_223608/164301369/ccs	chr10	+	258	1	Intergenic	novelGene_5513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGTCATGATGCATCAT	3186	False	NA	NA	False	AATAAA	-7	NA	95183521	95183779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_95183500_95183800
m54284U_201016_223608/164366818/ccs	chr5	-	3498	19	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	233	intron_retention	FALSE	canonical	3	214	junction_16	116.119258087388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31337255	31314554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31331434_31331575_31331840_31337227
m54284U_201016_223608/164497261/ccs	chr3	-	1405	1	Intergenic	novelGene_1420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-43	NA	62353699	62352294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_62352300_62353700
m54284U_201016_223608/16451941/ccs	chr15	+	2869	7	NIC	ENSMUSG00000033287.18	novel	1180	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_6	43.4105082004602	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTCTCTGGGCCACT	NA	False	NA	24	True	AATAAA	-31	NA	78312861	78323503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321357
m54284U_201016_223608/16451947/ccs	chr3	+	5820	24	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2090	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	106.461509147939	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148890	63291134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_63148988_63150636_63150716_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
m54284U_201016_223608/164561957/ccs	chr15	-	5043	6	NNC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	95.3217708605962	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTACTTTCTTTT	2180	False	NA	-10	True	AATAAA	-20	NA	4025226	4011516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_4015962_4018072_4018155_4019036_4019169_4021199_4021347_4021839_4021947_4025096
m54284U_201016_223608/164562077/ccs	chr17	+	3528	9	NIC	ENSMUSG00000024182.18	novel	3777	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	112.325141887291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATATGTGATATACTAT	NA	False	NA	11	True	AATAAA	-19	NA	26357661	26414785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26358016_26361591_26362551_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26412912_26413081_26413908
m54284U_201016_223608/164694101/ccs	chr13	-	183	1	Intergenic	novelGene_7278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCCATGTGGTTTC	2780	False	NA	NA	False	NA	NA	NA	100783826	100783643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_100783600_100783800
m54284U_201016_223608/164759839/ccs	chr9	+	3519	8	NNC	ENSMUSG00000032495.9	novel	520	4	NA	NA	-377	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	108.274405741964	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTTCCACGTGTGTTC	NA	False	NA	8	True	AATAAA	-19	NA	110789524	110813134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_110789646_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799248_110808537_110808694_110809894_110810032_110810697
m54284U_201016_223608/164825822/ccs	chr8	+	861	5	NIC	ENSMUSG00000031697.13	novel	1287	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	431.436264122524	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGTGTATGAGTAT	NA	False	NA	9	True	AATAAA	-17	NA	86026551	86034700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_86026622_86029990_86030081_86031837_86031951_86032845_86032948_86034214
m54284U_201016_223608/164889002/ccs	chr3	-	4977	13	NNC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_5	53.8892898037779	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACGCCTGGCCTTTTTT	7000	False	NA	-4	True	AATAAA	-19	NA	142101457	141945350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965012_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
m54284U_201016_223608/164954456/ccs	chr9	-	957	4	NNC	ENSMUSG00000037410.14	novel	3473	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_1	32.9679979508749	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGTTCTTCAGACATAA	NA	False	NA	NA	False	AATAAA	-18	NA	90152857	90120332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_90120514_90123062_90123232_90131843_90131998_90152404
m54284U_201016_223608/165021650/ccs	chr6	-	3567	9	NIC	ENSMUSG00000018999.15	novel	4110	9	NA	NA	0	848	combination_of_known_splicesites	TRUE	canonical	1	2	junction_6	73.4536418430019	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	NA	False	NA	-24	True	TATAAA	-19	NA	34153905	34132809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34144559_34144663_34147395_34147510_34153712
m54284U_201016_223608/165085513/ccs	chr10	-	2176	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_1	63.0349880798134	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390955	79376079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79377034_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
m54284U_201016_223608/165085739/ccs	chr6	-	4294	10	NNC	ENSMUSG00000030002.16	novel	6435	9	NA	NA	0	-2221	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	97.2756043922449	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCTGATATTTAAGT	7345	False	NA	-16	True	AATAAA	-16	NA	85938624	85921470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85932277_85932383_85935565_85935698_85936197_85936274_85938419
m54284U_201016_223608/16517455/ccs	chr8	+	3520	17	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	-7430	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	84.1614659078013	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26038202	26064801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_26038487_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
m54284U_201016_223608/16517831/ccs	chr1	-	2164	7	NIC	ENSMUSG00000048234.14	novel	2492	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	65.8847900167827	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATGTAACAAATTT	4717	False	NA	-3	True	AATAAA	-17	NA	39616486	39590376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39616235
m54284U_201016_223608/165284199/ccs	chr16	-	3324	22	NIC	ENSMUSG00000022962.16	novel	3276	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	483.698609333541	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443840	91418291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_91418664_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
m54284U_201016_223608/165348637/ccs	chr12	+	1902	9	NNC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	141.848015054847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515634_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201016_223608/165349548/ccs	chr6	-	2132	14	NIC	ENSMUSG00000029782.21	novel	3485	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_11	251.613679649939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATCTTGAAAGGTCAA	-1	True	NA	-18	True	ATTAAA	-16	NA	30509748	30482413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30508452_30508512_30508664_30508802_30509683
m54284U_201016_223608/165414561/ccs	chr11	+	1745	6	NNC	ENSMUSG00000069844.13	novel	2412	6	NA	NA	0	-429	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	109.587225532906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGACAAGCATGGCTTTG	NA	False	NA	9	True	AATAAA	-21	NA	66943495	66955728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_66943743_66944597_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
m54284U_201016_223608/165479468/ccs	chr12	-	208	1	Intergenic	novelGene_6534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTACTTAACTAGGCAA	NA	False	NA	NA	False	NA	NA	NA	3632334	3632126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_3632100_3632300
m54284U_201016_223608/165479786/ccs	chr17	-	163	1	Intergenic	novelGene_8565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTAAAGGAGCTGCT	NA	False	NA	NA	False	NA	NA	NA	35823261	35823098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35823100_35823300
m54284U_201016_223608/165480797/ccs	chr8	+	1624	12	NIC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	2	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_4	72.4595070731871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8827	False	NA	5	True	NA	NA	NA	70592362	70620138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
m54284U_201016_223608/165546510/ccs	chr13	+	2453	11	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	71.7933840963079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370447	84443989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_84370554_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
m54284U_201016_223608/165610378/ccs	chr9	+	6861	22	NIC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	7.64460000896398	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGCATGTTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	31191844	31293019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31289635
m54284U_201016_223608/165610418/ccs	chr4	+	2632	11	NNC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	231.159706696474	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136049250_136049361_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
m54284U_201016_223608/165611654/ccs	chr15	+	1726	3	NIC	ENSMUSG00000022415.13	novel	819	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1362	junction_2	41.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCCTGTGTGGATTA	NA	False	NA	18	True	NA	NA	NA	79975544	79997642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_79975694_79994644_79995946_79997366
m54284U_201016_223608/165807271/ccs	chr16	-	6815	28	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_27	11.5384488762197	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTGACTTCTTTACTC	2446	False	NA	-20	True	AATAAA	-13	NA	90807951	90732988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
m54284U_201016_223608/165807621/ccs	chr5	+	4833	20	NNC	ENSMUSG00000029174.19	novel	4760	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	77.9609960012501	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTCGTGTTGTCT	8516	False	NA	5	True	AATAAA	-15	NA	64387741	64508824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_64387874_64391534_64391613_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
m54284U_201016_223608/165808131/ccs	chr17	+	2010	7	NNC	ENSMUSG00000024160.17	novel	1949	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	70.7248188403477	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	25105732	25111123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_25106220_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
m54284U_201016_223608/165808377/ccs	chr6	-	181	1	Intergenic	novelGene_3209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38519557	38519376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38519400_38519600
m54284U_201016_223608/16581310/ccs	chr13	-	5204	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_8	45.9511280910437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718933	55687131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
m54284U_201016_223608/16582011/ccs	chr4	-	196	1	Intergenic	novelGene_2024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAAAAGGCAACAACA	NA	False	NA	NA	False	NA	NA	NA	116532835	116532639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116532600_116532800
m54284U_201016_223608/165871688/ccs	chr12	+	194	1	Intergenic	novelGene_6758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTTTATCATTTTGA	5973	False	NA	NA	False	NA	NA	NA	80525198	80525392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_80525200_80525400
m54284U_201016_223608/165873898/ccs	chr5	-	4221	12	NNC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	-53963	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	596.157212057024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92285541	92200022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
m54284U_201016_223608/165938767/ccs	chr4	-	138	1	Intergenic	novelGene_2210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACCAAAAAAA	1663	False	NA	NA	False	NA	NA	NA	132733183	132733045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_132733000_132733200
m54284U_201016_223608/165939796/ccs	chr9	+	3553	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	213	0	intron_retention	FALSE	canonical	3	42	junction_1	104.062673423279	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1515	False	NA	23	True	AATAAA	-23	NA	113760214	113806270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201016_223608/166004458/ccs	chr10	+	2999	20	NIC	ENSMUSG00000019854.18	novel	2595	20	NA	NA	-305	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_9	57.6845946971456	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGGCGAGCCTCAAC	NA	False	NA	25	True	AATAAA	-36	NA	17931303	18000903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983418_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
m54284U_201016_223608/166004774/ccs	chr11	-	2624	10	NNC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_4	144.381524757699	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	975	False	NA	-24	True	ATTAAA	-12	NA	79145497	79130213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134237_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
m54284U_201016_223608/166068797/ccs	chr17	+	4931	17	NIC	ENSMUSG00000000708.15	novel	4653	18	NA	NA	322	0	intron_retention	FALSE	canonical	3	180	junction_6	30.4743103900646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGTTATGTTTTAT	NA	False	NA	19	True	AATATA	-45	NA	53874320	53979748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
m54284U_201016_223608/166070207/ccs	chr1	-	2535	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_7	102.476143565222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTAGAGTCTTCC	NA	False	NA	-16	True	AATGAA	-26	NA	160898228	160869074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
m54284U_201016_223608/166070751/ccs	chr5	-	3616	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	0	-691	combination_of_known_junctions	FALSE	canonical	3	183	junction_8	31.7487357578569	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23881012	23711140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
m54284U_201016_223608/166265254/ccs	chr2	+	4566	6	ISM	ENSMUSG00000026657.18	ENSMUST00000176828.8	4355	12	37528	-1459	31108	0	3prime_fragment	FALSE	canonical	3	51	junction_3	8.23164625090267	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTTGCCTCTTGGACA	4816	False	NA	NA	False	ATTAAA	-21	NA	4602094	4618854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
m54284U_201016_223608/166265603/ccs	chr17	+	1266	11	NNC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	132.636684216698	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTGTACCAAATCTG	NA	False	NA	NA	False	AATAAA	-13	NA	79244576	79255361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303_79254323_79255226
m54284U_201016_223608/166397070/ccs	chr5	-	3503	9	NIC	ENSMUSG00000040570.15	novel	3677	10	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	18.0398863632785	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGGTCTTTTTCCTTGA	NA	False	NA	1	True	ATTAAA	-19	NA	8672900	8540333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_8542590_8570858_8571017_8578605_8578775_8598235_8598317_8609411_8609502_8619494_8619581_8629024_8629159_8653869_8653986_8672487
m54284U_201016_223608/16647472/ccs	chr12	+	1862	1	Genic_Genomic	ENSMUSG00000114025.2	novel	NA	NA	NA	NA	1146	721	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTCCTTGTATTTTGTT	NA	False	NA	NA	False	NA	NA	NA	17953535	17955397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_+_17953500_17955400
m54284U_201016_223608/16647859/ccs	chr6	+	5812	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	0	889	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	30.8887948463326	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAGTTTCAAGTCTTTG	NA	False	NA	-4	True	AATAAA	-14	NA	120643381	120744754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
m54284U_201016_223608/166658242/ccs	chr16	+	2790	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	675	junction_9	454.50977525513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
m54284U_201016_223608/166659288/ccs	chrX	-	10383	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_34	43.1735453408802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972976	104841220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
m54284U_201016_223608/166789552/ccs	chr6	+	221	1	Intergenic	novelGene_3312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATATTATCAAAGAAGAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	67335070	67335291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_67335100_67335300
m54284U_201016_223608/166790797/ccs	chr3	-	189	1	Intergenic	novelGene_1391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTTTAGATGACATCA	NA	False	NA	NA	False	NA	NA	NA	51225775	51225586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_51225600_51225800
m54284U_201016_223608/166856709/ccs	chr11	+	1367	4	NNC	ENSMUSG00000020397.16	novel	2547	3	NA	NA	0	70	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	200.899643271626	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATAAAATGTTTAGAT	NA	False	NA	8	True	AATAAA	-21	NA	46327787	46332424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_46328019_46330632_46330652_46330720_46330803_46331389
m54284U_201016_223608/166920863/ccs	chr17	-	2609	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	55.588067433553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891585	56869948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
m54284U_201016_223608/166921914/ccs	chr1	-	173	1	Intergenic	novelGene_496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTAAGGAACTTTATTT	NA	False	NA	NA	False	NA	NA	NA	178140682	178140509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_178140500_178140700
m54284U_201016_223608/166987730/ccs	chr17	+	248	1	Intergenic	novelGene_8718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTCTCTCCAAGTACT	NA	False	NA	NA	False	AATAAA	-43	NA	74447817	74448065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_74447800_74448100
m54284U_201016_223608/166987821/ccs	chr10	+	3472	13	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	97	junction_1	125.203917004754	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATAGTCATTGCACA	8464	False	NA	19	True	TATAAA	-17	NA	80062513	80079737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80062641_80064155_80064273_80064828_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
m54284U_201016_223608/167051575/ccs	chr16	+	171	1	Intergenic	novelGene_8121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTGAAGCGAGCGGGGC	9925	False	NA	NA	False	NA	NA	NA	18258926	18259097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18258900_18259100
m54284U_201016_223608/167117465/ccs	chr9	+	2213	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_1	5271.33028750808	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1872	False	NA	20	True	AATAAA	-20	NA	59563858	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_59563922_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201016_223608/167117723/ccs	chr15	+	5086	2	Intergenic	novelGene_7820	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTGCCTCTTTCGAC	9618	False	NA	NA	False	NA	NA	NA	79856645	79878346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_79856837_79873451
m54284U_201016_223608/167182834/ccs	chr2	+	3445	26	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	8.49621092016906	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTATAGCTACGCGT	NA	False	NA	6	True	AATAAA	-17	NA	76236851	76426389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
m54284U_201016_223608/167185008/ccs	chr3	-	3612	16	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-153	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	69.9608144289041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86827839	86693465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_86694720_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
m54284U_201016_223608/167250426/ccs	chr1	+	177	1	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAAATGCAT	NA	False	NA	NA	False	NA	NA	NA	25263764	25263941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_25263800_25263900
m54284U_201016_223608/167314196/ccs	chr4	+	938	8	NNC	ENSMUSG00000009863.15	novel	1142	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	293	junction_1	1023.38288563579	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCGTTACTCTCCATTAT	NA	False	NA	NA	False	AATAAA	-14	NA	140688711	140706504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_140688788_140693811_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
m54284U_201016_223608/167446146/ccs	chr7	+	1934	6	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	55.9692772867401	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	594	False	NA	16	True	AATAAA	-23	NA	101872234	101887774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
m54284U_201016_223608/167446896/ccs	chr10	+	2390	6	NNC	ENSMUSG00000061759.16	novel	2429	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.8990329867172	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCACTGGTTTTTATTT	NA	False	NA	8	True	AATAAA	-17	NA	4382619	4405140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_4382712_4384827_4384934_4389491_4389737_4398308_4398424_4400646_4400810_4403471
m54284U_201016_223608/167510422/ccs	chr18	+	2128	20	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_12	65.5135265473079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGTTGCTAACTCCC	NA	False	NA	NA	False	AATAAA	-45	NA	12301795	12323054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317968_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
m54284U_201016_223608/167575713/ccs	chr11	+	1832	2	Intergenic	novelGene_5679	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAACCGTGTTGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	5407366	5414195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_5407536_5412532
m54284U_201016_223608/167576801/ccs	chr12	+	3821	10	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	0	-56	intron_retention	FALSE	canonical	3	24	junction_2	725.721981933666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGTACTCTGGAGAAG	NA	False	NA	-50	True	AAAAAG	-45	NA	111504649	111513124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
m54284U_201016_223608/167772440/ccs	chr13	+	4969	8	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	824	junction_5	87.3725310591004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGTGTTTTGTTTTGA	NA	False	NA	8	True	AATAAA	-19	NA	85337566	85361842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85360034_85360858
m54284U_201016_223608/167774066/ccs	chr1	+	3381	9	NNC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	0	-460	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	58.9888760699846	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATTCCAGTTGTTT	NA	False	NA	22	True	AATAAA	-22	NA	190661049	190678699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_190661444_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
m54284U_201016_223608/167774677/ccs	chr11	+	1976	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_11	247.898824098904	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455350	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
m54284U_201016_223608/167774687/ccs	chr2	-	172	1	Intergenic	novelGene_641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAACTTACA	NA	False	NA	NA	False	NA	NA	NA	25921049	25920877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_25920900_25921000
m54284U_201016_223608/16777741/ccs	chr7	+	2223	13	NIC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	130	junction_4	14.0227988964004	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	24099148	24122203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_24099317_24102816_24102973_24104951_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
m54284U_201016_223608/16778481/ccs	chr12	+	1598	12	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1680	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	278.776903604784	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	3240	False	NA	13	True	AATAAA	-18	NA	110450491	110537345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
m54284U_201016_223608/167904071/ccs	chr5	+	734	7	NNC	ENSMUSG00000049971.18	novel	1713	11	NA	NA	0	-22135	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_6	12.7986544431653	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTCTTGGTCATGG	8701	False	NA	NA	False	NA	NA	NA	127709325	127744800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_127709416_127721382_127721532_127727746_127727853_127734150_127734203_127740405_127740443_127741715_127741773_127744557
m54284U_201016_223608/167904601/ccs	chr2	+	2250	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_7	576.213271606096	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121215	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141466_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
m54284U_201016_223608/167905425/ccs	chr8	+	4196	14	NIC	ENSMUSG00000025812.19	novel	4214	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_13	37.2228217836647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTTGTATGTATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	128026092	128129058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
m54284U_201016_223608/167906115/ccs	chr13	+	423	2	Intergenic	novelGene_7303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTTTCTCTGCAGATA	285	False	NA	NA	False	AATATA	-6	NA	111686609	111688207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_111686713_111687887
m54284U_201016_223608/168100950/ccs	chr2	-	3395	16	NIC	ENSMUSG00000074643.13	novel	3441	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_15	84.4055290448045	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953855	155913764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953747
m54284U_201016_223608/168167277/ccs	chr11	+	2320	7	NNC	ENSMUSG00000020515.14	novel	231	3	NA	NA	-1281	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	266.148872291848	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57993697	58009420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_57994039_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
m54284U_201016_223608/168233727/ccs	chr3	-	1912	9	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	357	junction_8	250.561743887609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6116	False	NA	-2	True	AATAAA	-15	NA	153618630	153612925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_153613379_153613691_153613842_153614426_153614537_153614985_153615097_153615182_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
m54284U_201016_223608/168233815/ccs	chr5	-	1851	10	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_1	1604.44424438287	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126797	100108860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
m54284U_201016_223608/168297201/ccs	chr13	-	2406	6	NIC	ENSMUSG00000025872.6	novel	2335	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	215.338802820114	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTGTCTAAAGTTACTA	NA	False	NA	-3	True	AATAAA	-15	NA	54616662	54606649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614269_54615638_54615796_54616353
m54284U_201016_223608/168363600/ccs	chr8	-	1132	1	FSM	ENSMUSG00000063696.8	ENSMUST00000076373.8	954	1	-73	-105	-73	105	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGGCCATTTCTTTAG	NA	False	NA	NA	False	NA	NA	NA	103592503	103591371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_103591400_103592500
m54284U_201016_223608/168364435/ccs	chr7	+	2788	5	Intergenic	novelGene_3817	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	56.6629287982893	97	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTTTAAGTCATCAA	NA	False	NA	NA	False	NA	NA	NA	42903175	42915080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_42903292_42906867_42906982_42910109_42910237_42910431_42910493_42912710
m54284U_201016_223608/168428711/ccs	chr11	-	1189	1	Intergenic	novelGene_5736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTATTACGTATAAAATG	NA	False	NA	NA	False	TTTAAA	-11	NA	23223462	23222273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23222300_23223500
m54284U_201016_223608/168430005/ccs	chr4	-	472	3	NNC	ENSMUSG00000054428.13	novel	539	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	3917.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9299	False	NA	-20	True	AATAAA	-19	NA	132260912	132257865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_132258135_132260615_132260699_132260792
m54284U_201016_223608/168430250/ccs	chr17	-	200	1	Intergenic	novelGene_8794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGGGCAGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	95177252	95177052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_95177100_95177300
m54284U_201016_223608/168625468/ccs	chr18	+	4215	23	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	206.472578372613	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
m54284U_201016_223608/168626468/ccs	chr11	-	195	1	Intergenic	novelGene_6157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTAGCCTAGTCCACAAGG	2611	False	NA	NA	False	NA	NA	NA	86668566	86668371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_86668400_86668600
m54284U_201016_223608/168755338/ccs	chr8	+	2409	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_9	161.454169623732	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415900	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423978_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201016_223608/168886426/ccs	chr2	+	5177	16	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	85.906046870339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038653	156151872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
m54284U_201016_223608/168887457/ccs	chr13	-	5934	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_26	21.4396428147408	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTATCCACATTATT	NA	False	NA	-8	True	AATAAA	-17	NA	59970961	59919693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970446
m54284U_201016_223608/168953581/ccs	chr4	-	1219	10	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	986.569527250242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	8929	False	NA	-7	True	AATAAA	-16	NA	43031370	43028025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031130_43031328
m54284U_201016_223608/169084403/ccs	chr17	-	206	1	Antisense	novelGene_ENSMUSG00000024036.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGCCCCACAACCAAG	NA	False	NA	NA	False	NA	NA	NA	31526644	31526438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_31526400_31526600
m54284U_201016_223608/169085052/ccs	chr17	+	483	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_1	3791.74445341455	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTCTTAGTATTTA	4115	False	NA	33	True	AATATA	-24	NA	34043586	34057291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34043655_34044578_34044625_34048640_34048791_34057072
m54284U_201016_223608/16908687/ccs	chr10	+	2727	15	NNC	ENSMUSG00000019849.12	novel	10933	15	NA	NA	0	-8200	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	218.486491433167	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTTAGTTTTGGTTCCTT	NA	False	NA	34	True	AATAAA	-19	NA	44943298	45035094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_44943472_44948154_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
m54284U_201016_223608/16908967/ccs	chr11	-	176	1	Intergenic	novelGene_5737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATACATGAGTACACCAC	7657	False	NA	NA	False	NA	NA	NA	23249825	23249649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23249600_23249800
m54284U_201016_223608/16910663/ccs	chrX	-	182	1	Intergenic	novelGene_9711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGAGTCTTTTAG	NA	False	NA	NA	False	NA	NA	NA	159802431	159802249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_159802200_159802400
m54284U_201016_223608/16911186/ccs	chr11	+	174	1	Intergenic	novelGene_5645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTGTAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	3122088	3122262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_3122100_3122300
m54284U_201016_223608/169149130/ccs	chr16	-	4093	21	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	400.51053669036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
m54284U_201016_223608/169149980/ccs	chr5	+	1491	11	NIC	ENSMUSG00000052139.19	novel	1888	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_5	219.40148130767	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTCCTGAAGGCTTC	5874	False	NA	35	True	AATAAA	-31	NA	31855349	32242306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
m54284U_201016_223608/169214586/ccs	chr12	-	1911	1	Intergenic	novelGene_6787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCGATGTGTCTGAAAGAC	NA	False	NA	NA	False	NA	NA	NA	83732070	83730159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_83730200_83732100
m54284U_201016_223608/169216494/ccs	chr5	+	2661	4	NNC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	-4932	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	715.6819591597	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108228690_108228708_108252291_108252397_108254453
m54284U_201016_223608/169216756/ccs	chr17	-	2097	14	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1063	junction_5	395.007197897117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906498	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
m54284U_201016_223608/169280337/ccs	chr3	-	1792	9	NIC	ENSMUSG00000005625.16	novel	1332	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1001	junction_3	353.089201725286	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949856	94940014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
m54284U_201016_223608/169282270/ccs	chr9	+	2504	8	NNC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	49455	1043	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	21.4466590329	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	94	False	NA	NA	False	AATATA	-9	NA	114999061	115062336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_114999099_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
m54284U_201016_223608/169346849/ccs	chr2	+	1791	10	NNC	ENSMUSG00000027323.11	novel	3368	10	NA	NA	0	518	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_2	216.486648862701	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGTTATTTGCTGGAG	NA	False	NA	20	True	AATAAA	-16	NA	118943297	118966207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_118943516_118946792_118946882_118949091_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
m54284U_201016_223608/169411125/ccs	chr2	-	3522	22	NIC	ENSMUSG00000006800.15	novel	3808	22	NA	NA	232	-226	combination_of_known_splicesites	FALSE	canonical	3	15	junction_21	255.172272962579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGAGCTTTCAGACAT	NA	False	NA	-29	True	AATAAA	-25	NA	165996973	165916065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165996866
m54284U_201016_223608/169477116/ccs	chr1	+	2137	12	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	27.2156979494562	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981175	91056666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
m54284U_201016_223608/169478662/ccs	chr4	-	2134	7	NIC	ENSMUSG00000051517.15	novel	1508	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_4	12.5088857306405	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	-14	True	NA	-7	True	AATAAA	-14	NA	43499661	43496145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43496721_43496820_43496910_43497086_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
m54284U_201016_223608/169542757/ccs	chr13	+	3031	16	NIC	ENSMUSG00000074886.12	novel	2971	16	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_7	145.154936380254	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	NA	False	NA	28	True	AATACA	-30	NA	55593096	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599530_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
m54284U_201016_223608/169543522/ccs	chr5	+	1804	6	NNC	ENSMUSG00000029326.14	novel	1833	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_1	168.151122505917	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	False	NA	15	True	AATAAA	-15	NA	100187843	100216619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_100188133_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
m54284U_201016_223608/169544022/ccs	chr4	-	1311	7	NIC	ENSMUSG00000028842.16	novel	625	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	7.32006375199925	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATTGTCCTTTCATAA	2379	False	NA	NA	False	ATTAAA	-18	NA	126323334	126269470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126269734_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
m54284U_201016_223608/169607857/ccs	chr2	+	551	6	NNC	ENSMUSG00000084762.2	novel	412	4	NA	NA	-2383	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	272.981024981591	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTCTGAGCCCAAAATC	NA	False	NA	25	True	AATAAA	-35	NA	135488443	135493983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_135488469_135490846_135490892_135491052_135491123_135492537_135492672_135493417_135493478_135493766
m54284U_201016_223608/169804040/ccs	chrX	-	2289	14	NNC	ENSMUSG00000025038.8	novel	2554	15	NA	NA	68054	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_13	14.945265027612	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGACCATTTTATTGTA	NA	False	NA	-9	True	ATTAAA	-17	NA	17117553	16998287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_16998612_17014510_17014617_17027489_17027583_17028929_17029128_17067284_17067416_17070991_17071189_17073918_17074062_17081896_17082063_17089326_17089466_17090177_17090292_17092576_17092829_17096739_17096964_17109665_17109817_17117502
m54284U_201016_223608/169870414/ccs	chr5	+	203	1	Intergenic	novelGene_2792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTAAGAACTTATTTT	6104	False	NA	NA	False	NA	NA	NA	114948323	114948526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_114948300_114948500
m54284U_201016_223608/170000531/ccs	chr4	-	1320	7	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-268	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	582.22561491802	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTATTTTGACACTTT	NA	False	NA	-28	True	TATAAA	-23	NA	155170828	155158834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155170661
m54284U_201016_223608/170000633/ccs	chr3	+	858	5	NNC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	205	junction_4	6309.7996947209	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGCTTTAAACTTGCT	NA	False	NA	-3	True	AATAAA	-12	NA	137570351	137572579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571899_137572146
m54284U_201016_223608/170002887/ccs	chr3	-	196	1	Intergenic	novelGene_1660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTCAAGTGCATCTGA	2790	False	NA	NA	False	NA	NA	NA	121720612	121720416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_121720400_121720600
m54284U_201016_223608/170066982/ccs	chr19	+	5916	5	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	0	790	intron_retention	FALSE	canonical	1	3	junction_4	41.0510353097215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGAGTGACTCTTGTT	NA	False	NA	5	True	NA	NA	NA	41471075	41575765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41570216
m54284U_201016_223608/170133915/ccs	chr5	+	976	7	NIC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	459	combination_of_known_splicesites	FALSE	canonical	3	116	junction_2	529.179684879237	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTTTTTTTTTCTCTT	9078	False	NA	11	True	AATAAA	-20	NA	124045337	124065655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_124045430_124046162_124046278_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
m54284U_201016_223608/170525819/ccs	chr8	-	185	1	Intergenic	novelGene_4204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTCTTATAAGAAT	7348	False	NA	NA	False	NA	NA	NA	13194072	13193887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_13193900_13194100
m54284U_201016_223608/170592232/ccs	chr1	-	187	1	Intergenic	novelGene_248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGTCTGCTACCATA	NA	False	NA	NA	False	NA	NA	NA	92588500	92588313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_92588300_92588500
m54284U_201016_223608/170592381/ccs	chr6	+	2688	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_10	494.340526573553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808316	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201016_223608/170658541/ccs	chr5	-	2986	18	NIC	ENSMUSG00000029253.13	novel	3192	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	34.9586013196806	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCATCTTGTCTGTGGTG	NA	False	NA	-6	True	ATTAAA	-17	NA	86213410	86159882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
m54284U_201016_223608/170722096/ccs	chr2	+	3910	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	385.584283912091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7203	False	NA	14	True	AATAAA	-14	NA	29779806	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201016_223608/170723265/ccs	chr3	+	2481	12	NIC	ENSMUSG00000068917.13	novel	2112	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	250	junction_3	93.3379180298595	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072123	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
m54284U_201016_223608/170788620/ccs	chr5	-	5591	20	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	0	-1969	intron_retention	FALSE	canonical	2	22	junction_19	175.883901521442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996393	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27995942
m54284U_201016_223608/171048971/ccs	chr1	-	1569	11	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_9	98.4024898058987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	189654560	189612688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_189613064_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189642047_189642112_189654303
m54284U_201016_223608/17106953/ccs	chr11	+	2159	15	NIC	ENSMUSG00000018167.11	novel	2070	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	37.1593370033779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGATGGTGCATTCCT	875	False	NA	11	True	AATAAA	-14	NA	98249193	98271938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_98249335_98262895_98263169_98265829_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
m54284U_201016_223608/171114893/ccs	chr8	-	2896	27	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	1	1	junction_15	43.3067529615302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178348	72161296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
m54284U_201016_223608/171182576/ccs	chr18	-	1935	15	NNC	ENSMUSG00000024556.5	novel	715	4	NA	NA	0	-3406	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	146.095789096869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTCTCCAGTGCT	360	False	NA	NA	False	AATAAA	-18	NA	73948520	73906379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_73906671_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
m54284U_201016_223608/171182794/ccs	chr7	-	4130	24	NIC	ENSMUSG00000030739.19	novel	6390	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_23	21.0276620404758	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGGCTGCGTTTCTAA	NA	False	NA	-3	True	AATAAA	-15	NA	44282209	44255228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282174
m54284U_201016_223608/171312120/ccs	chrX	+	3167	23	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_9	67.1727297333874	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCATGTCCTAGTAT	557	False	NA	41	True	AATAAA	-29	NA	20484023	20517140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
m54284U_201016_223608/171379272/ccs	chr8	-	956	5	NIC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	44	junction_3	828.737895839209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85744885_85745150_85745349_85745439_85745548_85750806_85750955_85751733
m54284U_201016_223608/171444672/ccs	chr14	+	717	8	NIC	ENSMUSG00000037628.11	novel	634	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_1	23.9395497204172	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAGTTCTCCAGCATAG	NA	False	NA	2	True	AATAAA	-17	NA	46998051	47008977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
m54284U_201016_223608/171508917/ccs	chr5	+	167	1	Antisense	novelGene_ENSMUSG00000105601.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATATAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65692990	65693157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_65693000_65693200
m54284U_201016_223608/171574829/ccs	chr9	+	213	2	Antisense	novelGene_ENSMUSG00000054978.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGTGTACTCATATAAAT	NA	False	NA	NA	False	NA	NA	NA	65156446	65481679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_65156495_65481514
m54284U_201016_223608/171575485/ccs	chr17	+	2083	12	NIC	ENSMUSG00000048440.17	novel	2227	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	20.9331876957963	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCATGTCTTGGTTCCATT	NA	False	NA	21	True	NA	NA	NA	32755542	32770772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_32755630_32755971_32756171_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
m54284U_201016_223608/171639560/ccs	chr16	+	3059	6	NIC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-11	0	intron_retention	FALSE	canonical	1	49	junction_4	45.0910190614495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702511	3722634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3718742_3719646_3719990_3721329
m54284U_201016_223608/17172994/ccs	chr14	+	3426	21	NIC	ENSMUSG00000047098.19	novel	3485	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	45.0271029492238	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGGTGGTCCTTCTTC	4210	False	NA	18	True	AATAAA	-21	NA	55829200	55841130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832929_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
m54284U_201016_223608/171771984/ccs	chr4	-	158	1	Intergenic	novelGene_2229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAGAGAGAGAGA	NA	False	NA	-9	True	NA	NA	NA	133768814	133768656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_133768700_133768800
m54284U_201016_223608/171836550/ccs	chr15	-	2327	13	NNC	ENSMUSG00000022614.9	novel	3262	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	68.3192566801874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTAGTGGTTTTTCCTT	NA	False	NA	-3	True	AATAAA	-21	NA	89239862	89235341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238699_89239788
m54284U_201016_223608/171836761/ccs	chr2	+	2628	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	67.1094479528415	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201016_223608/172165046/ccs	chr7	+	1403	7	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	2401.74718810194	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGACCTCTTCCTGT	NA	False	NA	42	True	AATAAA	-30	NA	142606530	142621671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619984_142620090_142620397_142620500_142620883_142620971_142621048
m54284U_201016_223608/172230103/ccs	chr2	-	909	8	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	90.1022095359781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTGTAGGTATTCAGA	6119	False	NA	NA	False	NA	NA	NA	181007154	181001107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006492_181007011
m54284U_201016_223608/172230500/ccs	chr13	+	187	1	Intergenic	novelGene_7131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCACTATAGTGCCTTCT	NA	False	NA	NA	False	NA	NA	NA	59285138	59285325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_59285100_59285300
m54284U_201016_223608/172230904/ccs	chr14	+	1452	10	NIC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	0	-136	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	503.772435397836	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGGTCTCTTTTCT	NA	False	NA	14	True	TATAAA	-17	NA	73790205	73833087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_73790338_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
m54284U_201016_223608/172231106/ccs	chr9	+	2151	7	NIC	ENSMUSG00000032469.13	novel	2261	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	92.1188845399731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCCATCCTGCTGCAT	6435	False	NA	49	True	TATAAA	-1	NA	99457880	99466554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_99458179_99458628_99458754_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
m54284U_201016_223608/172294156/ccs	chr2	-	1597	1	FSM	ENSMUSG00000083879.5	ENSMUST00000121500.2	807	1	-18	-772	-18	772	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTCAGGTGGTGGCTGGG	NA	False	NA	NA	False	AATAAA	-35	NA	134605568	134603971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_134604000_134605600
m54284U_201016_223608/172361388/ccs	chr9	-	2446	4	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	939	junction_2	29.9369708257569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTGTTTACTCTTCAT	NA	False	NA	-4	True	AATAAA	-20	NA	64645040	64623886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_64624271_64632783_64632865_64633905_64635712_64644865
m54284U_201016_223608/17237591/ccs	chr11	-	3261	8	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	839	junction_7	39.0227563122351	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381174	116361670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116370651_116376694_116376762_116378943_116378997_116380873
m54284U_201016_223608/17238399/ccs	chr16	-	189	1	Intergenic	novelGene_8169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	23439215	23439026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_23439000_23439200
m54284U_201016_223608/172491812/ccs	chr7	-	2489	8	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1616	junction_3	188.063384885772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765080	79744593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_79744952_79745368_79745462_79745546_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
m54284U_201016_223608/172492409/ccs	chr4	-	243	1	Intergenic	novelGene_1975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCTGATTCGCTTTA	NA	False	NA	NA	False	NA	NA	NA	106622308	106622065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_106622100_106622300
m54284U_201016_223608/172558693/ccs	chrX	+	4332	17	NNC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	169	junction_14	180.447880286802	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722187	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
m54284U_201016_223608/172622315/ccs	chr2	+	4919	19	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_1	47.5505254349077	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201016_223608/172623784/ccs	chr16	-	202	1	Intergenic	novelGene_8288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTAAGAGAATTAAACTCA	NA	False	NA	NA	False	NA	NA	NA	61527794	61527592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_61527600_61527800
m54284U_201016_223608/172688939/ccs	chr16	+	3362	8	NIC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	0	-843	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	210.012050188768	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTATTCTGAGCTATAA	NA	False	NA	-5	True	AATAAA	-18	NA	32698182	32728402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32722788_32722916_32725901
m54284U_201016_223608/172754642/ccs	chr1	-	2980	11	NIC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	299	junction_6	22.8613210466937	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	189654560	189612688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_189613064_189614305_189614415_189616020_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
m54284U_201016_223608/172755200/ccs	chr17	-	176	1	Intergenic	novelGene_8642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGAATTTAAATC	NA	False	NA	NA	False	NA	NA	NA	51386019	51385843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_51385800_51386000
m54284U_201016_223608/172949954/ccs	chr4	+	3833	25	NIC	ENSMUSG00000028782.15	novel	4871	29	NA	NA	-3135	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_14	5.46055934253382	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGCCCGGATTGTTT	1488	False	NA	9	True	AATAAA	-15	NA	129900533	129916426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129900710_129901354_129901520_129901602_129901771_129901864_129901967_129902115_129902223_129903003_129903199_129903274_129903344_129903446_129903556_129903850_129904188_129905105_129905212_129905394_129905439_129905617_129905745_129906068_129906173_129906266_129906370_129907285_129907437_129907614_129907685_129908115_129908183_129908343_129908430_129910854_129911027_129911321_129911418_129911707_129911748_129912453_129913074_129915011_129915048_129915355_129915455_129915942
m54284U_201016_223608/172951586/ccs	chr13	+	3097	17	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	175.913286522082	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
m54284U_201016_223608/172951628/ccs	chr14	-	186	1	Intergenic	novelGene_7450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTTGCATAACATTCC	NA	False	NA	NA	False	NA	NA	NA	52574983	52574797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_52574800_52575000
m54284U_201016_223608/173081068/ccs	chr13	-	4251	15	NIC	ENSMUSG00000021156.18	novel	3824	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	40.2020407645265	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814992	9734871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
m54284U_201016_223608/173343286/ccs	chr1	+	1211	5	NNC	ENSMUSG00000026238.15	novel	1216	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	9439.51567547297	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTTCTGTGTGTA	NA	False	NA	57	True	NA	NA	NA	86454447	86458434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_86454673_86456894_86456967_86457177_86457275_86457457_86457527_86457686
m54284U_201016_223608/173343432/ccs	chr7	-	2232	6	NIC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	276	junction_4	23.0824608740056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGGTGGTTATTTCTC	NA	False	NA	-2	True	AATATA	-20	NA	33832693	33808967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818632_33824909_33825012_33831913
m54284U_201016_223608/173343545/ccs	chr2	+	3282	13	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	201	junction_1	24.4135379110307	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4065	False	NA	-41	True	NA	NA	NA	180609057	180624253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
m54284U_201016_223608/173540099/ccs	chr6	+	181	1	Intergenic	novelGene_3515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGAGGGAGATTGCAAA	NA	False	NA	34	True	NA	NA	NA	125389668	125389849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_125389700_125389800
m54284U_201016_223608/173605430/ccs	chr11	-	2484	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	86.0969995605732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGTGGCTTGTCTG	NA	False	NA	-4	True	AATAAA	-21	NA	86435631	86392858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
m54284U_201016_223608/173671098/ccs	chr3	-	961	11	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_6	627.010334843055	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642467	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639651_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
m54284U_201016_223608/173672048/ccs	chr1	-	162	1	Intergenic	novelGene_350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	136500074	136499912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_136499900_136500100
m54284U_201016_223608/17367749/ccs	chr5	-	3066	1	Antisense	novelGene_ENSMUSG00000029625.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	145109861	145106795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_145106800_145109900
m54284U_201016_223608/17368773/ccs	chr5	+	3026	18	NNC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	105.920875345279	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGGTAGTTTTCAATC	396	False	NA	15	True	AATAAA	-18	NA	67464307	67513129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485116_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
m54284U_201016_223608/17369911/ccs	chr19	+	5530	24	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	0	-591	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	225.734926603853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36811631	36870286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
m54284U_201016_223608/173736054/ccs	chr3	+	2556	17	NIC	ENSMUSG00000027774.17	novel	4078	18	NA	NA	0	280	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	186.187814702654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAGGGAAGAAGAGAATA	NA	False	NA	NA	False	NA	NA	NA	67337448	67382417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
m54284U_201016_223608/173801567/ccs	chr8	-	196	1	Intergenic	novelGene_4453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACCAAACCCCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	106697773	106697577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106697600_106697800
m54284U_201016_223608/173802275/ccs	chr7	+	2971	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	357.593073496982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2629	False	NA	30	True	AATAAA	-18	NA	13012760	13045350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
m54284U_201016_223608/173804046/ccs	chr11	-	1333	9	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1890	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	29.6858552175948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100162587	100153712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235_100160370_100162468
m54284U_201016_223608/173867973/ccs	chr6	+	2231	17	NIC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	0	-60	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	52.6289710496985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	16	True	ATTAAA	-23	NA	58572959	58669436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_58573003_58573959_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
m54284U_201016_223608/173868714/ccs	chr18	-	2791	2	Intergenic	novelGene_8810	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCACATGTGATTCTTAA	NA	False	NA	NA	False	NA	NA	NA	10276033	10272228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_10274701_10275714
m54284U_201016_223608/173998457/ccs	chr9	+	1599	9	NNC	ENSMUSG00000066705.8	novel	1789	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	453.492006544768	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	625	False	NA	22	True	AATAAA	-26	NA	45281739	45307457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_45281787_45287685_45287750_45301285_45301346_45301931_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
m54284U_201016_223608/174000473/ccs	chr5	+	3805	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	453	junction_14	43.6456338941788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATACTCAGTATTTAT	NA	False	NA	18	True	ATTAAA	-25	NA	45827260	45857469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853887_45856182_45856253_45857189
m54284U_201016_223608/174130610/ccs	chr15	+	8806	38	NIC	ENSMUSG00000023026.17	novel	8914	38	NA	NA	105	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	7.50183809957063	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTTTAATTCTTAAAC	4962	False	NA	9	True	AATAAA	-13	NA	99936649	100117354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053035_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
m54284U_201016_223608/174131442/ccs	chr1	+	5441	13	NIC	ENSMUSG00000038866.16	novel	5796	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	20.013016597538	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATGCCTTATTGCAAG	NA	False	NA	16	True	AATAAA	-20	NA	105918418	105961804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_105919438_105928660_105928773_105931829_105931907_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
m54284U_201016_223608/174196201/ccs	chrX	+	3095	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	100.321998591339	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCATGTCCTAGTAT	555	False	NA	41	True	AATAAA	-29	NA	20484021	20517140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
m54284U_201016_223608/174261728/ccs	chr6	+	4064	8	NIC	ENSMUSG00000041477.15	novel	1748	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_6	11.7038280847223	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152248	119197167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119194941_119196963
m54284U_201016_223608/174262422/ccs	chr7	-	1503	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	210	junction_7	116.504882966775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	False	NA	-7	True	AATAAA	-16	NA	4687980	4663519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
m54284U_201016_223608/174262714/ccs	chr8	+	4972	21	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	950	junction_1	72.314867074482	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941204	95041488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
m54284U_201016_223608/17433300/ccs	chr16	-	1216	3	NIC	ENSMUSG00000002844.10	novel	2966	4	NA	NA	0	-1374	combination_of_known_junctions	FALSE	canonical	2	38	junction_2	649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTCTGACTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	38273044	38265765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_38266467_38267609_38267971_38272890
m54284U_201016_223608/17434907/ccs	chr16	-	211	1	Intergenic	novelGene_8126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATGTTGAAATTTGATG	NA	False	NA	NA	False	NA	NA	NA	18518130	18517919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18517900_18518100
m54284U_201016_223608/17435376/ccs	chr11	+	1466	1	Intergenic	novelGene_5883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATATATTGC	NA	False	NA	NA	False	NA	NA	NA	60237489	60238955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_60237500_60239000
m54284U_201016_223608/174391338/ccs	chr12	-	184	1	Intergenic	novelGene_6707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAGAAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	71352540	71352356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71352400_71352500
m54284U_201016_223608/174391645/ccs	chr12	-	177	1	Intergenic	novelGene_6866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGGAGGGAGCAGAGGT	1917	False	NA	NA	False	NA	NA	NA	104986847	104986670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_104986700_104986800
m54284U_201016_223608/174393854/ccs	chr2	+	1428	4	NNC	ENSMUSG00000086454.8	novel	582	4	NA	NA	0	72	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	222.40653467618	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389528	104399249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_104389821_104390068_104390321_104398205_104398836_104398995
m54284U_201016_223608/174458763/ccs	chr2	+	3654	18	NIC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	123.527310906505	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153003467	153052386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_153003492_153020805_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
m54284U_201016_223608/174590042/ccs	chr11	+	176	1	Intergenic	novelGene_5657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTCTGTATTTT	7717	False	NA	NA	False	NA	NA	NA	4042801	4042977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4042800_4043000
m54284U_201016_223608/174655206/ccs	chr13	-	2832	23	NIC	ENSMUSG00000021196.15	novel	2679	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	364.829941703852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	False	NA	-14	True	ATTAAA	-10	NA	6698761	6631217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6643290_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
m54284U_201016_223608/174719379/ccs	chr7	+	2432	9	NIC	ENSMUSG00000025485.14	novel	3406	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	213	junction_2	25.0171815958553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTTAACATTCATGAT	NA	False	NA	9	True	ATTAAA	-16	NA	140437334	140443056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441354_140441752_140441873_140442223
m54284U_201016_223608/174915850/ccs	chr2	+	3081	16	NNC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	0	-941	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_4	131.53781036476	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGTTACCTCAATATT	NA	False	NA	18	True	AATAAA	-28	NA	29825439	29849442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829500_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
m54284U_201016_223608/174917926/ccs	chr18	-	2657	16	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_14	1766.58751520803	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649599	64632728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64647885_64647936_64648396_64648477_64649486
m54284U_201016_223608/17499398/ccs	chr7	-	4435	9	NIC	ENSMUSG00000030846.16	novel	2319	13	NA	NA	61	0	intron_retention	FALSE	canonical	3	185	junction_8	24.0204990580962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTATAAATTTTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	128063315	128044003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_128044384_128045530_128046129_128046336_128046422_128046535_128046632_128047374_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
m54284U_201016_223608/17500190/ccs	chr6	+	2908	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	32	junction_1	197.076572985819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATACTCAAAGAAACC	NA	False	NA	1	True	AATAAA	-21	NA	87864909	87889512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_87865055_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
m54284U_201016_223608/17500676/ccs	chr9	-	1789	8	NIC	ENSMUSG00000019471.11	novel	7851	8	NA	NA	0	1522	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	586.784875227641	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCTGGTTCAGTGCTGT	NA	False	NA	-8	True	AATAAA	-18	NA	21061278	21050726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053974_21054242_21054522_21061051
m54284U_201016_223608/17500728/ccs	chr6	+	2712	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	212.708109379775	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118466_125120963
m54284U_201016_223608/175244756/ccs	chr5	-	222	1	Intergenic	novelGene_2542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAACAAAGCTAATGTTC	NA	False	NA	NA	False	AAAAAG	-26	NA	33896473	33896251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_33896300_33896500
m54284U_201016_223608/175245057/ccs	chr10	-	1111	1	Intergenic	novelGene_5172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAAGACAGGACACAAA	NA	False	NA	NA	False	NA	NA	NA	3976126	3975015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_3975000_3976100
m54284U_201016_223608/175245943/ccs	chr16	-	179	1	Intergenic	novelGene_8141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	5225	False	NA	NA	False	NA	NA	NA	20333453	20333274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20333300_20333500
m54284U_201016_223608/175308882/ccs	chr17	+	2424	7	NIC	ENSMUSG00000034729.17	novel	1109	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_1	627.511487278653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
m54284U_201016_223608/175311490/ccs	chr5	+	1108	5	NNC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_1	256.087265399902	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254184	124256259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_124254675_124255038_124255257_124255333_124255452_124255892_124255963_124256047
m54284U_201016_223608/175311494/ccs	chr14	-	1609	6	NIC	ENSMUSG00000021792.16	novel	1537	6	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_5	120.659852477947	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACCTCTGTGCACA	NA	False	NA	-22	True	AATAAA	-11	NA	40735732	40715696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735582
m54284U_201016_223608/175571314/ccs	chr18	+	1910	13	NIC	ENSMUSG00000025423.17	novel	2633	15	NA	NA	0	-124	combination_of_known_junctions	FALSE	canonical	3	372	junction_1	338.465163150754	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGATTCTTTCAAGAA	7936	False	NA	19	True	AATAAA	-29	NA	77152940	77234509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
m54284U_201016_223608/17564431/ccs	chr11	-	2872	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	72	junction_9	62.8793418727409	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671484	117656813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664200_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
m54284U_201016_223608/17564995/ccs	chr3	-	1018	6	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	110	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_3	88.3388929068052	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876489	107871011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107875451_107875517_107876078_107876155_107876420
m54284U_201016_223608/175834687/ccs	chr13	-	3595	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	35.2448499214194	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	-2	True	AATAAA	-22	NA	77283584	77191206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
m54284U_201016_223608/175835713/ccs	chrX	+	176	1	Intergenic	novelGene_9400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGTTTTAAACCCC	NA	False	NA	NA	False	NA	NA	NA	13534676	13534852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_13534700_13534900
m54284U_201016_223608/175965800/ccs	chr17	-	3781	3	NIC	ENSMUSG00000094441.3	novel	3544	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	111	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTGTGTTGTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	33474119	33458691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33461925_33462686_33463109_33473993
m54284U_201016_223608/176030280/ccs	chr9	+	1989	9	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	466	junction_7	31.6462379280697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8647	False	NA	21	True	GATAAA	-13	NA	21176601	21185041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184207_21184549
m54284U_201016_223608/176030450/ccs	chr1	+	141	1	Intergenic	novelGene_110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTCATCTGGTTACCAA	NA	False	NA	NA	False	AATAAA	-28	NA	45846296	45846437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_45846300_45846400
m54284U_201016_223608/176096725/ccs	chr3	-	2531	17	NIC	ENSMUSG00000015748.14	novel	2933	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	136.057834669673	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGTATGATATTTTT	NA	False	NA	-38	True	ATTAAA	-12	NA	95763197	95737933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95757006_95757103_95758874_95759006_95760755_95760950_95763060
m54284U_201016_223608/176097226/ccs	chr6	-	1871	6	NNC	ENSMUSG00000040649.16	novel	4725	6	NA	NA	0	-1330	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	64.001874972535	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGCATGTTTGCATG	9240	False	NA	-128	True	AATAAA	-14	NA	122463464	122432548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497_122449723_122463414
m54284U_201016_223608/176163509/ccs	chr11	-	5654	15	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	3872	junction_7	627.752977707321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	False	NA	-13	True	AATAAA	-23	NA	5049067	5019688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
m54284U_201016_223608/176226349/ccs	chr16	-	8967	44	NIC	ENSMUSG00000022914.18	novel	9843	41	NA	NA	0	-2271	combination_of_known_junctions	TRUE	canonical	3	75	junction_31	102.463997291444	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATGTTTGGAGTGCA	NA	False	NA	NA	False	TATAAA	-29	NA	95883647	95802741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_95804555_95805059_95805909_95806162_95806331_95809036_95809415_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
m54284U_201016_223608/176291876/ccs	chr10	-	2760	18	NNC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	61	0	at_least_one_novel_splicesite	FALSE	canonical	2	140	junction_3	844.513938539527	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541312	86526703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_86526993_86527492_86527613_86528003_86528156_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
m54284U_201016_223608/176293853/ccs	chr5	+	2757	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1054.8382840775	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493760	34510780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_34493886_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
m54284U_201016_223608/17631562/ccs	chr5	+	2608	10	NNC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	733.442113144135	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTGTGTGTATGTGC	4601	False	NA	33	True	AATAAA	-44	NA	29940992	29991476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969399_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
m54284U_201016_223608/176359840/ccs	chrX	-	195	1	Intergenic	novelGene_9622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAGCATACAGGTGAAGG	NA	False	NA	NA	False	NA	NA	NA	128660520	128660325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_128660300_128660500
m54284U_201016_223608/176423658/ccs	chr2	+	1034	6	NIC	ENSMUSG00000001999.16	novel	657	6	NA	NA	0	424	combination_of_known_junctions	FALSE	canonical	3	37	junction_5	66.545022353291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAGTCGATTTTGAT	2237	False	NA	NA	False	NA	NA	NA	126912612	126932693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126932163
m54284U_201016_223608/176424766/ccs	chr15	-	1753	6	NIC	ENSMUSG00000033220.8	novel	3038	7	NA	NA	0	1025	intron_retention	FALSE	canonical	3	13	junction_2	6.04648658313239	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTGTTGATTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	78456981	78445069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_78446239_78449062_78449223_78449640_78449704_78450113_78450232_78454931_78455004_78456810
m54284U_201016_223608/176424956/ccs	chr15	-	176	1	Intergenic	novelGene_7953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAACCAAAAGTAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	98905103	98904927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98904900_98905100
m54284U_201016_223608/176555669/ccs	chr17	+	3452	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_8	115.934847603682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332316	26342228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338357_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
m54284U_201016_223608/176555850/ccs	chr18	-	191	1	Intergenic	novelGene_8941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCATTGATGACTTACA	NA	False	NA	NA	False	NA	NA	NA	42754479	42754288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_42754300_42754500
m54284U_201016_223608/176620613/ccs	chr5	-	952	1	FSM	ENSMUSG00000106133.2	ENSMUST00000197957.2	349	1	-63	-540	-63	540	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGCTTAAAAGTCCAAAA	5852	False	NA	NA	False	AATAAA	-45	NA	24323725	24322773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24322800_24323700
m54284U_201016_223608/176621749/ccs	chr6	-	4258	7	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	0	-607	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	106.573527044321	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-13	True	NA	NA	False	ATTAAA	-19	NA	13608043	13581292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13606922_13607084_13607828
m54284U_201016_223608/176621793/ccs	chr15	-	874	3	NNC	ENSMUSG00000045608.8	novel	477	3	NA	NA	0	367	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTCTCTCCAAGTTTTA	NA	False	NA	-12	True	ATTAAA	-15	NA	95530709	95522251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_95522899_95530158_95530347_95530670
m54284U_201016_223608/176621872/ccs	chr4	+	2694	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	0	-148	combination_of_known_splicesites	FALSE	canonical	3	20	junction_10	149.820722494883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGGGAGAATTTGTATG	5272	False	NA	10	True	NA	NA	NA	108436650	108471882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
m54284U_201016_223608/176686598/ccs	chr3	-	1152	7	NNC	ENSMUSG00000000563.18	novel	1311	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_6	1728.67248359993	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATAAGTTTCATAC	NA	False	NA	-24	True	AATAAA	-12	NA	105866580	105850017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866443
m54284U_201016_223608/176883739/ccs	chr1	+	470	11	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	388	junction_4	1994.59027371538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201016_223608/177013398/ccs	chr13	-	2672	1	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	0	-25792	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGTGTATTGGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	13568180	13565508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_13565500_13568200
m54284U_201016_223608/177078918/ccs	chr5	-	3417	1	Intergenic	novelGene_2548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCCAAAAAAAAAAAAA	7699	False	NA	NA	False	NA	NA	NA	34518463	34515046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_34515000_34518500
m54284U_201016_223608/177079923/ccs	chr11	+	5592	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	61	0	intron_retention	FALSE	canonical	2	6	junction_19	96.7877182291224	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599251	3640477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634074_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
m54284U_201016_223608/177080668/ccs	chr17	+	758	5	NNC	ENSMUSG00000057409.8	novel	3065	5	NA	NA	0	-2245	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_4	24.0572234474388	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAAATAAAA	1475	False	NA	NA	False	NA	NA	NA	21709259	21727781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21727601
m54284U_201016_223608/177145082/ccs	chr2	+	5889	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	53.1669090845673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4619	False	NA	33	True	AATAAA	-25	NA	20524424	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20810769_20812712_20812836_20813520
m54284U_201016_223608/177146223/ccs	chr17	+	1153	6	NIC	ENSMUSG00000006818.6	novel	5861	5	NA	NA	0	-262	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	1288.2053563	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGTGTGAATTGCTCT	NA	False	NA	46	True	ATTAAA	-34	NA	13225732	13234241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_13225849_13226747_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
m54284U_201016_223608/1771861/ccs	chr9	-	2167	1	Antisense	novelGene_ENSMUSG00000032369.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAATGAACCTGACAAGA	NA	False	NA	NA	False	NA	NA	NA	92147673	92145506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_92145500_92147700
m54284U_201016_223608/177211317/ccs	chr11	+	1251	3	NNC	ENSMUSG00000014245.9	novel	2174	7	NA	NA	53085	-514	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	112	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGGGCCCACACCTT	NA	False	NA	24	True	AATAAA	-28	NA	62402518	62404729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_62402636_62402963_62403098_62403729
m54284U_201016_223608/177211490/ccs	chr11	+	2044	14	NIC	ENSMUSG00000025142.19	novel	1690	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	887	junction_3	62.6465618847222	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563881	120600270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120600073_120600169
m54284U_201016_223608/177277027/ccs	chr5	-	3379	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	169	junction_18	290.373753405274	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559841	149540309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559625_149559784
m54284U_201016_223608/177341366/ccs	chr17	-	191	1	ISM	ENSMUSG00000097125.3	ENSMUST00000234190.2	417	2	17641	0	17046	0	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGACCCATCTGCCTC	NA	False	NA	NA	False	NA	NA	NA	29666083	29665892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_29665900_29666100
m54284U_201016_223608/177343062/ccs	chr16	-	762	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACTTTGGCTGTGAAG	NA	False	NA	-5	True	AATAAA	-31	NA	48434229	48420466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_48421063_48434063
m54284U_201016_223608/177407073/ccs	chr7	-	190	1	Intergenic	novelGene_3710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	372	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGGGCACAGGTTGTTC	NA	False	NA	NA	False	NA	NA	NA	25019091	25018901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_25018900_25019100
m54284U_201016_223608/17761276/ccs	chr11	+	187	1	Intergenic	novelGene_5867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGGTTTTTCTTTGACT	NA	False	NA	NA	False	NA	NA	NA	58264064	58264251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_58264100_58264300
m54284U_201016_223608/177669466/ccs	chr17	+	217	1	Intergenic	novelGene_8639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGGTGGAAACCTTC	NA	False	NA	NA	False	NA	NA	NA	48282022	48282239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_48282000_48282200
m54284U_201016_223608/177734988/ccs	chr5	+	3446	15	NNC	ENSMUSG00000040584.9	novel	2705	10	NA	NA	-8045	-52	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	59.4603280536266	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCATAATTGTAAATAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8761773	8798518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_8762145_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
m54284U_201016_223608/177867545/ccs	chr15	-	3066	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_6	160.006944293747	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069_79855098_79855202
m54284U_201016_223608/177930479/ccs	chr4	-	1381	3	NNC	ENSMUSG00000046133.4	novel	913	3	NA	NA	-9901	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_2	141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTTCTTCTTGATGT	NA	False	NA	-2	True	ATTAAA	-26	NA	101760887	101747216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_101747741_101747885_101748198_101760342
m54284U_201016_223608/177996781/ccs	chr11	+	4044	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	0	64	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	19.4608741731395	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGCCACTGGTCTCTT	1480	False	NA	NA	False	AATAAA	-22	NA	83855301	83931844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
m54284U_201016_223608/177997654/ccs	chr6	-	3015	14	NIC	ENSMUSG00000001157.14	novel	2949	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	102.041585675158	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTCCTGTTTAAAGTGA	NA	False	NA	-18	True	AATAAA	-20	NA	86710365	86668749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694500_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
m54284U_201016_223608/178061730/ccs	chr6	-	631	4	NIC	ENSMUSG00000030042.16	novel	457	4	NA	NA	0	110	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	385.203842140755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGTTTTTCTTTTTCT	NA	False	NA	-14	True	NA	NA	NA	82629851	82595862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_82596120_82628417_82628460_82629063_82629149_82629604
m54284U_201016_223608/178063766/ccs	chr12	+	2602	5	NIC	ENSMUSG00000037957.15	novel	1351	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	61.3977809045246	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTTTATCCTTTTT	5372	False	NA	NA	False	ATTAAA	-15	NA	110704451	110770672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110763376_110763442_110769838
m54284U_201016_223608/178064001/ccs	chr6	-	4515	6	NIC	ENSMUSG00000030203.18	novel	5104	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	28.8818281969823	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTGAGACGTGGCT	NA	False	NA	-3	True	AATAAA	-24	NA	134769588	134692435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_134696015_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134769239
m54284U_201016_223608/178127641/ccs	chr13	-	4131	15	NIC	ENSMUSG00000021156.18	novel	4003	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	39.4736414249679	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9814490	9734871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
m54284U_201016_223608/178128384/ccs	chr13	-	1636	8	NIC	ENSMUSG00000045273.9	novel	1251	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	316	junction_6	18.9413703359625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGACTGGAGAGATG	NA	False	NA	1	True	AATAAA	-41	NA	100912407	100896181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100908212_100909233_100909290_100912194
m54284U_201016_223608/178194877/ccs	chr9	-	576	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	664	junction_2	88746.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275501	78274333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_78274577_78275002_78275178_78275343
m54284U_201016_223608/178260716/ccs	chr4	+	1413	10	ISM	ENSMUSG00000028763.19	ENSMUST00000030547.15	14187	97	0	58547	0	-16814	5prime_fragment	TRUE	canonical	3	21	junction_4	6.76227735764575	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGCCGTCCCTAGT	NA	False	NA	NA	False	ATTAAA	-15	NA	137196079	137239394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152
m54284U_201016_223608/17826672/ccs	chr12	+	5025	8	NIC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	38.0579579492293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATGTGAGTGGCTCTTT	NA	False	NA	12	True	ATTAAA	-17	NA	80690999	80730111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80691191_80691379_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
m54284U_201016_223608/17827749/ccs	chr17	+	158	1	Intergenic	novelGene_8753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGTAGACTTTG	NA	False	NA	4	True	NA	NA	NA	83605387	83605545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_83605400_83605500
m54284U_201016_223608/17827950/ccs	chr17	-	1082	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	-73	-324	-73	324	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGTACTAAACCTCAA	NA	False	NA	NA	False	NA	NA	NA	17566475	17565393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_17565400_17566500
m54284U_201016_223608/178389751/ccs	chr11	+	2001	14	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	188	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	1424.6122196343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGTCATTTTAAAAT	NA	False	NA	22	True	ATTAAA	-22	NA	22940625	22953339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_22940946_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
m54284U_201016_223608/178389933/ccs	chr8	-	199	1	Intergenic	novelGene_4568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATAAATAAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	123286624	123286425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_123286400_123286600
m54284U_201016_223608/178456577/ccs	chr1	+	913	7	NNC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_1	233.142779333943	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890328	134901900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_134890348_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
m54284U_201016_223608/178520549/ccs	chr5	+	3962	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	3	616	junction_3	357.553592386612	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201016_223608/178717609/ccs	chr9	-	3130	16	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	0	-160	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	74.7007065264818	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGACTTTCCAGGTGTT	6378	False	NA	-21	True	AATAAA	-33	NA	44272967	44259384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
m54284U_201016_223608/178783387/ccs	chr10	+	186	1	Intergenic	novelGene_5536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGCTTGAGACAGTAGC	NA	False	NA	NA	False	NA	NA	NA	111114851	111115037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_111114900_111115000
m54284U_201016_223608/178847983/ccs	chr2	-	4074	14	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	120	junction_7	19.2079865046321	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315744	155232584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
m54284U_201016_223608/178849905/ccs	chr8	+	2155	15	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	0	-383	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	133.476685268267	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTTCCTGCTGTTGCC	2157	False	NA	20	True	ATTAAA	-25	NA	70495462	70524614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70495528_70495670_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
m54284U_201016_223608/178915875/ccs	chr7	-	1791	7	NNC	ENSMUSG00000062300.15	novel	1955	6	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	342.880769688564	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGTGTTTTGTAATC	NA	False	NA	-4	True	AATAAA	-16	NA	19483401	19458085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472083_19472189_19472300_19483139
m54284U_201016_223608/17892471/ccs	chr7	+	1563	5	NIC	ENSMUSG00000011096.18	novel	1160	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	128.581443062364	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGTGAGTTCGTGTTG	1757	False	NA	6	True	ATTAAA	-11	NA	44499004	44504832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44499114_44501994_44502384_44503203_44503282_44503362_44503533_44504015
m54284U_201016_223608/17894081/ccs	chr12	+	945	10	NNC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	0	58	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_9	268.690009095341	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTGAAATGTCTGTGA	NA	False	NA	6	True	AATATA	-17	NA	59060239	59074731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074579
m54284U_201016_223608/178979852/ccs	chr11	+	1503	4	NIC	ENSMUSG00000001445.11	novel	1708	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	229.382262222305	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTATGTTTATATCTGTA	908	False	NA	10	True	NA	NA	NA	96932420	96940039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_96932479_96937855_96938021_96938238_96938384_96938904
m54284U_201016_223608/178981163/ccs	chr14	+	1282	1	Antisense	novelGene_ENSMUSG00002076975.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	77777179	77778461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_77777200_77778500
m54284U_201016_223608/178981619/ccs	chr10	+	166	1	Intergenic	novelGene_5561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAGAAAACA	NA	False	NA	NA	False	NA	NA	NA	118932747	118932913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_118932700_118932900
m54284U_201016_223608/179110442/ccs	chr14	+	520	2	NNC	ENSMUSG00000021967.5	novel	2877	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTGTCTCATACGGAA	NA	False	NA	25	True	ATTAAA	-17	NA	58063690	58064405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_58063771_58063965
m54284U_201016_223608/179111725/ccs	chr16	-	346	1	Intergenic	novelGene_8062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATGATAACATGA	NA	False	NA	NA	False	NA	NA	NA	11119837	11119491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_11119500_11119800
m54284U_201016_223608/179177938/ccs	chr15	-	1301	4	NNC	ENSMUSG00000014313.16	novel	738	3	NA	NA	78	0	intron_retention	FALSE	canonical	3	46	junction_3	4068.60175271828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCTTTGCTTGGTTAT	NA	False	NA	-5	True	AATAAA	-18	NA	35938275	35932125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_35932244_35935430_35935560_35937105_35937185_35937300
m54284U_201016_223608/179306748/ccs	chr5	+	2175	2	NNC	ENSMUSG00000039095.9	novel	3539	2	NA	NA	2478	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGAAATAACTCT	79	False	NA	NA	False	TTTAAA	-18	NA	28373169	28377164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_28373297_28375116
m54284U_201016_223608/179309247/ccs	chr8	+	3314	12	NNC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	74	-298	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	239.722877196232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTCAAGTAGGATGGCT	NA	False	NA	21	True	AATAAA	-22	NA	86219311	86253891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_86219399_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
m54284U_201016_223608/17957064/ccs	chr11	-	2826	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	85	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_1	76.6025496787408	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174214	52143112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_52144644_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
m54284U_201016_223608/179700076/ccs	chr2	-	934	1	FSM	ENSMUSG00000081400.2	ENSMUST00000119790.2	793	1	-12	-129	-12	129	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGAAAACATTTT	NA	False	NA	NA	False	NA	NA	NA	83184305	83183371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_83183400_83184300
m54284U_201016_223608/179898443/ccs	chr5	-	167	1	Intergenic	novelGene_2667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	320	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2249	False	NA	NA	False	NA	NA	NA	92261415	92261248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92261200_92261400
m54284U_201016_223608/180028915/ccs	chr7	-	4582	28	NIC	ENSMUSG00000032737.14	novel	4730	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.3932567353139	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGGAAAAGGAAAACC	NA	False	NA	-22	True	AATAAA	-22	NA	101487010	101471859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_101472611_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
m54284U_201016_223608/180226355/ccs	chr5	+	1387	4	NIC	ENSMUSG00000040532.15	novel	1473	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	552	junction_2	38.6637929966641	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGATCCGTTTTCACC	NA	False	NA	10	True	AATAAA	-17	NA	135038544	135041024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_135038972_135039740_135040235_135040337_135040520_135040740
m54284U_201016_223608/180226747/ccs	chr8	-	758	6	NNC	ENSMUSG00000031509.11	novel	1263	6	NA	NA	-3519	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	15.5897402159241	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTGATAGGGCTGTTT	NA	False	NA	-8	True	AATAAA	-22	NA	11716123	11705477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_11705682_11706108_11706190_11711671_11711756_11712589_11712692_11715035_11715099_11715899
m54284U_201016_223608/18023394/ccs	chr17	+	1597	5	NIC	ENSMUSG00000091705.9	novel	1150	5	NA	NA	895	0	combination_of_known_splicesites	TRUE	canonical	1	3	junction_4	2.23606797749979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTTGTTTCTGTT	5775	False	NA	NA	False	NA	NA	NA	35562112	35565738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564819
m54284U_201016_223608/180290151/ccs	chr13	+	4477	3	NNC	ENSMUSG00000045767.10	novel	4652	2	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	158	junction_2	37.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTACTACTTTATTTT	NA	False	NA	19	True	AATAAA	-19	NA	55840936	55851313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55841161_55846885_55848033_55848207
m54284U_201016_223608/180290777/ccs	chr7	-	2648	12	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	141	junction_4	13.331129294417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	1167	False	NA	-16	True	AGTAAA	-16	NA	127897281	127870550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
m54284U_201016_223608/180357266/ccs	chr7	-	2659	9	NIC	ENSMUSG00000019082.19	novel	2811	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_8	22.1412369798979	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	461	False	NA	-19	True	AATAAA	-18	NA	141017551	141009661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
m54284U_201016_223608/180357318/ccs	chr4	-	1651	6	NNC	ENSMUSG00000028619.16	novel	6431	5	NA	NA	0	448	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	29.9492904757358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAGAGGCATAGTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	107035480	106996018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_106996997_107004711_107004906_107022744_107022887_107033670_107033822_107034761_107034902_107035434
m54284U_201016_223608/180552902/ccs	chr7	-	1111	7	NIC	ENSMUSG00000053291.16	novel	1192	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	262.193312907353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	False	NA	-1	True	CATAAA	-19	NA	26878321	26867848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26878151
m54284U_201016_223608/180554252/ccs	chr10	+	4022	17	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	7	junction_14	86.6349200669107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235753	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25383674_25383756_25388870_25388980_25398194
m54284U_201016_223608/18154847/ccs	chr18	+	3984	21	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_18	167.510029550472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704888_42704973_42706324_42706426_42707582
m54284U_201016_223608/18155067/ccs	chr17	+	5220	23	NIC	ENSMUSG00000032624.17	novel	5286	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_3	107.479269575252	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658410	83787790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83734651_83734781_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
m54284U_201016_223608/18220071/ccs	chr16	-	674	2	Antisense	novelGene_ENSMUSG00000022652.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	705	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAATAAATATAAA	NA	False	NA	-41	True	NA	NA	NA	48422120	48420502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_48421063_48422006
m54284U_201016_223608/18284755/ccs	chr12	+	203	1	Intergenic	novelGene_6653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTGAAGTCCTGGAC	NA	False	NA	NA	False	NA	NA	NA	55359920	55360123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_55359900_55360100
m54284U_201016_223608/18351925/ccs	chr12	+	4429	21	NIC	ENSMUSG00000021111.16	novel	2605	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_17	515.704081814368	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750974	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105800968_105801044_105803023
m54284U_201016_223608/18352462/ccs	chr4	+	97	1	Intergenic	novelGene_2289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGGTAGAAGGAGTTAA	NA	False	NA	NA	False	NA	NA	NA	139050664	139050761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_139050700_139050800
m54284U_201016_223608/1836715/ccs	chr10	-	187	1	Intergenic	novelGene_5252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTGGTGAAGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	34129967	34129780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_34129800_34130000
m54284U_201016_223608/1836892/ccs	chr12	+	2911	1	Intergenic	novelGene_6610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAACTCTCGCGAGAAG	NA	False	NA	NA	False	NA	NA	NA	30631468	30634379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_30631500_30634400
m54284U_201016_223608/18482536/ccs	chr7	+	368	3	NNC	ENSMUSG00000047721.9	novel	333	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_1	1083.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTGGTCTCAGTGTGC	1141	False	NA	18	True	ATTAAA	-13	NA	126295137	126295865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_126295272_126295357_126295453_126295726
m54284U_201016_223608/18547983/ccs	chr7	-	3900	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	4823	junction_8	530.346716780636	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201016_223608/18678358/ccs	chr10	-	2061	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_15	561.749291647677	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899280	116886910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899064
m54284U_201016_223608/18678793/ccs	chr17	-	1916	14	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_10	101.600738477491	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557430_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201016_223608/18680527/ccs	chr12	-	181	1	Intergenic	novelGene_6813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTTTTGCTTACTGCT	NA	False	NA	NA	False	NA	NA	NA	85605245	85605064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85605100_85605200
m54284U_201016_223608/18811400/ccs	chr9	-	678	4	NNC	ENSMUSG00000032346.8	novel	2138	3	NA	NA	0	-1297	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	952.33059152563	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTCAGTTGATGGTTC	NA	False	NA	-18	True	AGTAAA	-15	NA	78286007	78284687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_78284974_78285256_78285440_78285635_78285812_78285974
m54284U_201016_223608/18877098/ccs	chr11	+	3917	20	NNC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	92.2018440997883	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4913	False	NA	20	True	ATTAAA	-20	NA	6339363	6356074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348657_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
m54284U_201016_223608/18941421/ccs	chr5	+	197	1	ISM	ENSMUSG00000029502.15	ENSMUST00000136900.2	3786	3	6689	2758	6649	-824	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATCATGAACTCTAGA	650	False	NA	NA	False	NA	NA	NA	110331411	110331608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_110331400_110331600
m54284U_201016_223608/18941569/ccs	chr8	+	1698	7	NIC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	78.3212756677406	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96058952	96074135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_96059075_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
m54284U_201016_223608/19007151/ccs	chr4	-	668	1	FSM	ENSMUSG00000056412.7	ENSMUST00000121600.2	306	1	-196	-166	-196	166	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATAGGCACTGGGGGTTGG	6124	False	NA	NA	False	NA	NA	NA	40775760	40775092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_40775100_40775800
m54284U_201016_223608/1900971/ccs	chr11	+	2208	2	NNC	ENSMUSG00000037573.6	novel	2288	2	NA	NA	-1606	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTATCCTGTGGTCTTTG	NA	False	NA	NA	False	ATTAAA	-19	NA	94100673	94106321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_94100872_94104311
m54284U_201016_223608/1902251/ccs	chr3	-	4848	15	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	48.8133157644343	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTTCTTAATGACT	NA	False	NA	-34	True	AATAAA	-13	NA	152046044	151979485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_151982491_151989418_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
m54284U_201016_223608/19072436/ccs	chr13	-	3403	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	0	3026	combination_of_known_junctions	TRUE	canonical	3	32	junction_23	102.017993890807	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCTGTGACATGCCG	NA	False	NA	-12	True	AATAAA	-22	NA	99027548	98980539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027451
m54284U_201016_223608/19072792/ccs	chr9	-	599	1	FSM	ENSMUSG00000080848.4	ENSMUST00000117563.2	472	1	-65	-62	-65	62	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGGGGTGGCTCATTTA	NA	False	NA	-1	True	AATAAA	-34	NA	115870197	115869598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_115869600_115870200
m54284U_201016_223608/19203912/ccs	chr17	-	2365	16	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	491.668786436108	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5740	False	NA	-5	True	AATAAA	-16	NA	33904393	33865209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
m54284U_201016_223608/19268560/ccs	chr4	-	1883	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	375.814528723944	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9570	False	NA	NA	False	ATTAAA	-14	NA	117146643	117128660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146395
m54284U_201016_223608/19268828/ccs	chr8	-	189	1	Antisense	novelGene_ENSMUSG00000050079.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACCAAGACAAAATGCACA	NA	False	NA	NA	False	NA	NA	NA	95379016	95378827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_95378800_95379000
m54284U_201016_223608/19334697/ccs	chr10	+	2186	13	NIC	ENSMUSG00000005897.15	novel	3732	14	NA	NA	-106	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	10.3289641300568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTGCGTTCTCTTCCT	NA	False	NA	0	True	AATAAA	-16	NA	93983778	94031543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94024010_94024151_94026480_94026619_94028696_94028803_94031038
m54284U_201016_223608/19399632/ccs	chr14	-	2548	21	NIC	ENSMUSG00000040701.17	novel	2673	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_19	30.3714915669284	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTAGCTGTGAAGTGGC	NA	False	NA	-22	True	AATAAA	-16	NA	55344050	55336306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55343381_55343587_55343964
m54284U_201016_223608/19464393/ccs	chr11	+	4047	22	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	0	64	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	16.6746919453981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTGCCACTGGTCTCTT	1480	False	NA	NA	False	AATAAA	-22	NA	83855301	83931844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910416_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
m54284U_201016_223608/19466556/ccs	chr16	-	2321	14	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	141.24916086047	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406410	30380188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400979_30401348_30401470_30404371_30404499_30406255
m54284U_201016_223608/19466643/ccs	chr9	+	1421	12	NIC	ENSMUSG00000055720.11	novel	1319	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	95.5400482857649	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818268	57837251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_57818291_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
m54284U_201016_223608/19466651/ccs	chr11	-	201	1	Intergenic	novelGene_5766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTCTTATCAGAGCTGT	1079	False	NA	NA	False	NA	NA	NA	32236159	32235958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_32236000_32236200
m54284U_201016_223608/19532514/ccs	chr13	+	2440	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	170.857036683091	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201016_223608/19597600/ccs	chr5	-	1919	11	NIC	ENSMUSG00000029406.16	novel	1690	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	9.73447481891037	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCGCTTCAGGGGTTCTT	8218	False	NA	NA	False	AATAAA	-20	NA	124387823	124270867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124271039_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
m54284U_201016_223608/19662129/ccs	chr14	+	4409	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	168.511683571199	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201016_223608/1967033/ccs	chr12	+	3622	25	NIC	ENSMUSG00000020608.8	novel	5272	26	NA	NA	0	204	combination_of_known_junctions	FALSE	canonical	3	100	junction_2	124.985825585233	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4536	False	NA	15	True	AATAAA	-16	NA	11316105	11368248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_11316290_11321729_11321873_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
m54284U_201016_223608/1968407/ccs	chr12	+	177	1	Intergenic	novelGene_6569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAATGCCACTGAAG	NA	False	NA	2	True	NA	NA	NA	12851044	12851221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_12851000_12851200
m54284U_201016_223608/196909/ccs	chrX	+	1389	10	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	130.820015835536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTACCTTCTGTATTA	NA	False	NA	20	True	AATAAA	-24	NA	47345773	47371330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47367243_47367438_47367544_47367645_47370938
m54284U_201016_223608/197061/ccs	chr8	+	2574	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	371.107314518171	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201016_223608/19728462/ccs	chr2	-	3332	4	NIC	ENSMUSG00000087179.9	novel	874	4	NA	NA	0	2339	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	68.6164865190737	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	-3	True	NA	NA	NA	156681740	156672629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_156675347_156679742_156679834_156680337_156680457_156681335
m54284U_201016_223608/19728864/ccs	chr9	-	711	5	ISM	ENSMUSG00000034218.17	ENSMUST00000132403.2	1243	7	0	5252	0	95	5prime_fragment	FALSE	canonical	3	85	junction_4	8.07774721070176	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACGACTCAGAGTTTAA	NA	False	NA	-4	True	AATAAA	-16	NA	53447973	53438398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_53438638_53442930_53443077_53444959_53445073_53445164_53445267_53447862
m54284U_201016_223608/19728910/ccs	chr18	+	2822	17	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	3711	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	434.874982035067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35686462	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
m54284U_201016_223608/197528/ccs	chr12	+	1299	8	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	0	-317	intron_retention	FALSE	canonical	3	289	junction_7	680.802857376675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACACTTTTGTGACTGTCT	NA	False	NA	NA	False	ATTAAA	-23	NA	80992307	80996954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
m54284U_201016_223608/19794740/ccs	chr14	-	174	1	Intergenic	novelGene_7351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGGAACAATATAGCTT	NA	False	NA	NA	False	NA	NA	NA	21449463	21449289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_21449300_21449500
m54284U_201016_223608/19859594/ccs	chr11	-	182	1	Intergenic	novelGene_6019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACTTTTGGAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75695896	75695714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75695700_75695900
m54284U_201016_223608/19923314/ccs	chr3	-	3456	16	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	61.1551760324141	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86827686	86693465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_86694720_86699375_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
m54284U_201016_223608/19988705/ccs	chr9	+	178	1	Intergenic	novelGene_5090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTTTTTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	108546427	108546605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108546400_108546600
m54284U_201016_223608/20056543/ccs	chr13	+	3743	9	NIC	ENSMUSG00000064138.15	novel	3892	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	34.765059686415	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAACTGTGTCTTCTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	77856837	78314354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78147704_78147822_78154506_78154592_78311631
m54284U_201016_223608/20120751/ccs	chr9	+	2478	14	NIC	ENSMUSG00000032059.14	novel	2530	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	55.2657913388354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTTTCAGTCTGCT	NA	False	NA	38	True	TTTAAA	-45	NA	50686604	50754842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
m54284U_201016_223608/20121535/ccs	chr9	+	844	2	NNC	ENSMUSG00000079225.4	novel	638	2	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	2674	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	81559593	81560730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_81560062_81560354
m54284U_201016_223608/20252554/ccs	chrX	-	4262	4	NIC	ENSMUSG00000087403.10	novel	398	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGACTGTGTGACTTCC	NA	False	NA	NA	False	NA	NA	NA	151110466	151077823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_151081871_151103205_151103281_151110156_151110236_151110405
m54284U_201016_223608/20317549/ccs	chr7	+	188	1	Intergenic	novelGene_4147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGGTATCTTCAAAA	NA	False	NA	NA	False	NA	NA	NA	138959102	138959290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_138959100_138959300
m54284U_201016_223608/20318081/ccs	chr11	+	3489	20	NNC	ENSMUSG00000025579.15	novel	3633	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	106.801470105146	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCACGTCACCTCATG	NA	False	NA	19	True	AATAAA	-20	NA	119158853	119176280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171387_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
m54284U_201016_223608/2032997/ccs	chrX	-	1233	9	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	662.694499750828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974423	72965726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72974013_72974124_72974319
m54284U_201016_223608/2033976/ccs	chr11	+	5520	15	NNC	ENSMUSG00000018401.18	novel	5753	19	NA	NA	4032	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	33.9546516304753	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGGTCTTTTTATTT	NA	False	NA	20	True	AATAAA	-20	NA	87490509	87507128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87490701_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
m54284U_201016_223608/2034455/ccs	chr9	+	4026	9	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	77.4721724233934	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
m54284U_201016_223608/20448194/ccs	chr15	+	142	1	FSM	ENSMUSG00000061848.6	ENSMUST00000072779.6	456	1	380	-66	380	66	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAATGATGGTATGT	6654	False	NA	NA	False	AATAAA	-36	NA	81856970	81857112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_81857000_81857100
m54284U_201016_223608/20449833/ccs	chr2	+	185	1	Intergenic	novelGene_994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGTTTGAAATAAAATTA	NA	False	NA	NA	False	NA	NA	NA	118484179	118484364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_118484200_118484400
m54284U_201016_223608/20711301/ccs	chr17	+	2417	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_6	211.832047449225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5622	False	NA	12	True	AATAAA	-23	NA	34128471	34134564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132927_34133037_34134316
m54284U_201016_223608/20775177/ccs	chr6	+	4884	28	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_16	80.1745181511443	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7539	False	NA	13	True	AATAAA	-17	NA	146789984	146933523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146918358_146918392_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
m54284U_201016_223608/20775664/ccs	chr10	+	1479	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	86	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTTGGTTGTTCTGTCCC	2286	False	NA	36	True	ACTAAA	-24	NA	79795985	79803531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802304_79802393_79802561_79803153_79803223_79803304
m54284U_201016_223608/20776308/ccs	chr5	-	2546	7	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	110	junction_6	363.263181300953	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186754	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
m54284U_201016_223608/20908187/ccs	chr17	+	4553	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	43.4635783688837	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
m54284U_201016_223608/2099360/ccs	chr2	-	2940	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	84	junction_13	124.260444885995	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652910	93525975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
m54284U_201016_223608/2099482/ccs	chrX	-	205	1	Intergenic	novelGene_9732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAAAACAAATACATTG	NA	False	NA	NA	False	NA	NA	NA	163892428	163892223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_163892200_163892400
m54284U_201016_223608/2099527/ccs	chr11	+	4176	24	NNC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_17	126.910697507251	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5272	False	NA	21	True	AATAAA	-21	NA	68906922	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924490_68924686_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
m54284U_201016_223608/21038827/ccs	chr2	+	194	1	Intergenic	novelGene_883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCAAGAGCACAAGGAG	NA	False	NA	NA	False	NA	NA	NA	78954909	78955103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_78954900_78955100
m54284U_201016_223608/21105367/ccs	chr9	-	1389	7	NNC	ENSMUSG00000050471.18	novel	1662	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	58.402815761647	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6389	False	NA	-20	True	ATTAAA	-21	NA	35179076	35128530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
m54284U_201016_223608/21168598/ccs	chr10	-	2159	11	NIC	ENSMUSG00000025403.6	novel	2289	12	NA	NA	0	-178	intron_retention	FALSE	canonical	3	1501	junction_10	185.884614747967	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGTTCCTATTACTGTG	NA	False	NA	-6	True	AATAAA	-13	NA	127358271	127353185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_127353786_127353893_127354002_127354093_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
m54284U_201016_223608/21170454/ccs	chr11	-	3789	27	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	78	junction_13	40.333300731889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120992	102086572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
m54284U_201016_223608/21170915/ccs	chr15	-	4501	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	0	0	intron_retention	FALSE	canonical	3	484	junction_24	49.9440503289962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491711	76480008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76480133_76480208_76480348_76480419_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
m54284U_201016_223608/21234387/ccs	chr3	+	3769	7	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1030	junction_1	92.5466849157164	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066092	97083834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_97066682_97073158_97073288_97073389_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
m54284U_201016_223608/21235521/ccs	chr3	+	2507	14	NNC	ENSMUSG00000027865.11	novel	3008	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	26.3712682095922	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTCTTCTCAGAGTCA	NA	False	NA	22	True	AGTAAA	-33	NA	100069833	100113971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093923_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
m54284U_201016_223608/21235905/ccs	chr19	+	5509	13	NIC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.6525935444266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214338	25411860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_25214682_25252111_25252199_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
m54284U_201016_223608/21300197/ccs	chr13	-	4124	10	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	442	junction_9	97.8388698035931	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54841663	54827213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831576_54831773_54831900_54832150_54832302_54841541
m54284U_201016_223608/21365781/ccs	chr11	-	2960	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_5	62.8630256987365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508739	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201016_223608/21366005/ccs	chr11	-	3134	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	493.407245649242	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
m54284U_201016_223608/21498371/ccs	chr10	-	1341	4	NIC	ENSMUSG00000035278.10	novel	1261	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	953	junction_3	134.254319193917	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634394	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80632357_80632424_80632657_80633606_80633812_80633914
m54284U_201016_223608/21627543/ccs	chr6	+	3542	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	1154	junction_4	129.83740400705	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201016_223608/2164315/ccs	chr16	-	3327	22	NIC	ENSMUSG00000022962.16	novel	3518	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	423.491999833412	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACTTATCTAGCA	NA	False	NA	NA	False	AATAAA	-12	NA	91443840	91418291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_91418664_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
m54284U_201016_223608/21758844/ccs	chr3	+	3366	12	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	0	130	combination_of_known_junctions	TRUE	canonical	3	14	junction_10	54.0434474740096	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTTTGTGAACACTTG	NA	False	NA	55	True	GATAAA	-29	NA	33854339	33864223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861575_33861987_33862098_33862834
m54284U_201016_223608/21760588/ccs	chr8	+	2333	6	NNC	ENSMUSG00000056820.8	novel	2391	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	173.008207897776	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCCTCTGGTTAAGCTT	5246	False	NA	9	True	AATAAA	-14	NA	125739787	125760931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_125739952_125740254_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
m54284U_201016_223608/21825236/ccs	chr15	+	1374	5	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	353.147543528197	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTACTGTCCTGTGTCTTT	35	False	NA	27	True	AATAAA	-32	NA	10486134	10493775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_10486351_10486538_10486803_10490341_10490601_10492850_10492950_10493239
m54284U_201016_223608/21826347/ccs	chr16	+	1156	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_7	1349.13685369572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571166	84619774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84618147_84618191_84619674
m54284U_201016_223608/2184/ccs	chr13	-	2727	7	NIC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	512	junction_4	31.4624997240984	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090342	36080686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36087740_36088401_36088547_36090186
m54284U_201016_223608/21889215/ccs	chr10	-	1168	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	169	junction_4	139.833829955415	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520877	88511133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_88511933_88513361_88513471_88514385_88514499_88515720_88515818_88520827
m54284U_201016_223608/21889401/ccs	chr3	-	3115	2	NNC	ENSMUSG00000054379.8	novel	669	5	NA	NA	-20565	2280	intron_retention	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGGTGTTTCTATCT	NA	False	NA	NA	False	AATAAA	-19	NA	103126856	103103261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_103106313_103126792
m54284U_201016_223608/21955925/ccs	chr14	-	1922	10	ISM	ENSMUSG00000022091.7	ENSMUST00000227259.2	2481	21	12381	-464	12381	0	3prime_fragment	FALSE	canonical	3	14	junction_5	4.24554959434284	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCTGCTTCATTA	NA	False	NA	NA	False	AATAAA	-16	NA	70429691	70417916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534
m54284U_201016_223608/21956488/ccs	chr2	+	2573	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	0	at_least_one_novel_splicesite	FALSE	canonical	1	342	junction_7	5706.51241645751	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29952112	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960933
m54284U_201016_223608/22021677/ccs	chr7	+	168	1	Intergenic	novelGene_3601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAATAAAATAA	691	False	NA	NA	False	NA	NA	NA	3214571	3214739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3214600_3214700
m54284U_201016_223608/22217877/ccs	chr11	-	4429	22	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	0	-8130	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	16.9562595883946	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGTAGAAAATCATTTAG	8151	False	NA	NA	False	ATTAAA	-20	NA	77498641	77428117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77496377_77496465_77498033
m54284U_201016_223608/22218242/ccs	chr17	-	192	1	Antisense	novelGene_ENSMUSG00000046201.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAACAAGATCTTTA	NA	False	NA	NA	False	NA	NA	NA	3201233	3201041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_3201000_3201200
m54284U_201016_223608/22218756/ccs	chrX	-	1727	8	NIC	ENSMUSG00000072944.12	novel	1996	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	199.257704124737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGCTGAACTGGGTTT	NA	False	NA	-9	True	AATAAA	-16	NA	138963329	138907553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_138908616_138922769_138922837_138925977_138926090_138928587_138928638_138928886_138929038_138935506_138935664_138939798_138939905_138963307
m54284U_201016_223608/22282920/ccs	chrX	+	1894	16	NIC	ENSMUSG00000025271.14	novel	1739	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	50	junction_2	10.2058806577385	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTTCATTGTTCTC	NA	False	NA	19	True	AATAAA	-37	NA	149371251	149426874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_149371339_149371940_149372041_149372948_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
m54284U_201016_223608/22283523/ccs	chr11	+	4350	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_18	31.7647167454221	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022222	50062857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50059522_50059630_50061523
m54284U_201016_223608/2230539/ccs	chr18	+	2675	21	NIC	ENSMUSG00000036452.19	novel	7898	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	6.07124369466422	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGACTTTGAGCGTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	39126197	39440426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_39126683_39230682_39230779_39232624_39232687_39235221_39235294_39243507_39243610_39244842_39244954_39253171_39253277_39254826_39254957_39259885_39259987_39265108_39265204_39283092_39283172_39338336_39338374_39360420_39360487_39362943_39363019_39376658_39376747_39378335_39378395_39379871_39379978_39419579_39419740_39429837_39429977_39439754_39439906_39440070
m54284U_201016_223608/22348831/ccs	chr2	+	195	2	Intergenic	novelGene_680	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	346	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTCACATATGAACACA	NA	False	NA	NA	False	NA	NA	NA	30091512	30280072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30091562_30279926
m54284U_201016_223608/22480195/ccs	chr5	+	2892	16	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	62.5618271969595	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	-4	True	NA	6	True	AATAAA	-22	NA	120649232	120672089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659038_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
m54284U_201016_223608/22480587/ccs	chr8	+	2382	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	179	junction_1	102.688395968905	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415917	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201016_223608/22545671/ccs	chr5	-	3070	7	NNC	ENSMUSG00000047881.15	novel	3241	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	184.251111861563	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGCGACATCTTACAGGA	NA	False	NA	-13	True	AATAAA	-23	NA	64126240	64066407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_64068492_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
m54284U_201016_223608/22677194/ccs	chr5	+	2537	11	NNC	ENSMUSG00000001569.11	novel	9219	11	NA	NA	52	5121	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	52.8295371927485	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACATGGTGGCACGTGTCT	3011	False	NA	5	True	TTTAAA	-7	NA	29639713	29656474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29644885_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
m54284U_201016_223608/22678045/ccs	chr9	-	2260	18	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_17	125.657082658103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7563	False	NA	NA	False	AATAAA	-18	NA	107749970	107650761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107738821_107738929_107749847
m54284U_201016_223608/22741451/ccs	chr11	+	183	1	Intergenic	novelGene_6180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACACTACTTACATGT	NA	False	NA	NA	False	NA	NA	NA	87517059	87517242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87517100_87517200
m54284U_201016_223608/22742035/ccs	chr4	-	1502	1	NIC	ENSMUSG00000036114.4	novel	856	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	9620	False	NA	-17	True	AATAAA	-14	NA	41713534	41712032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_41712000_41713500
m54284U_201016_223608/22808784/ccs	chr15	-	3224	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	171.411217706297	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79802252_79802477_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79855069
m54284U_201016_223608/22874930/ccs	chrX	+	1879	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	-54	-757	-54	757	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAGTAATAATGGTCAA	NA	False	NA	NA	False	AAAAAG	-28	NA	79500293	79502172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_79500300_79502200
m54284U_201016_223608/23003268/ccs	chr12	+	7069	29	NNC	ENSMUSG00000036333.12	novel	7409	32	NA	NA	0	-220	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	9.91340053685321	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACGGAGTTTTATTCAC	NA	False	NA	9	True	AATAAA	-19	NA	25024923	25109476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040671_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
m54284U_201016_223608/23070399/ccs	chr16	-	2834	12	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_5	11.3705433554579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	8072	False	NA	-1	True	AATAAA	-19	NA	17907027	17889589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898940_17899394_17899430_17902410_17902620_17906751
m54284U_201016_223608/23070569/ccs	chr15	-	1793	4	NNC	ENSMUSG00000053929.18	novel	1854	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	313.477626350306	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTATCCTGTCTGTG	NA	False	NA	-10	True	AATAAA	-15	NA	76541120	76531135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_76531969_76532298_76532511_76533140_76533328_76540559
m54284U_201016_223608/23135178/ccs	chr7	-	5635	11	NIC	ENSMUSG00000044465.20	novel	3521	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_3	97.955295926254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049239	105027816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
m54284U_201016_223608/23200681/ccs	chr1	-	1623	1	Intergenic	novelGene_329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGAGAGACTTG	NA	False	NA	NA	False	NA	NA	NA	134429160	134427537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_134427500_134429200
m54284U_201016_223608/23202549/ccs	chr17	+	166	1	Intergenic	novelGene_8413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGTATTAATAGTTA	NA	False	NA	5	True	NA	NA	NA	24688533	24688699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_24688500_24688700
m54284U_201016_223608/23265781/ccs	chr11	-	167	1	Intergenic	novelGene_6257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAATTAAAATAAA	3927	False	NA	NA	False	NA	NA	NA	96785071	96784904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_96784900_96785100
m54284U_201016_223608/23265931/ccs	chr11	-	5011	1	Intergenic	novelGene_6177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCCTGTCTTAGCTGC	NA	False	NA	NA	False	NA	NA	NA	87373797	87368786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87368800_87373800
m54284U_201016_223608/23266115/ccs	chr7	+	158	1	Intergenic	novelGene_4067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATGT	NA	False	NA	NA	False	NA	NA	NA	121755937	121756095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_121755900_121756100
m54284U_201016_223608/23267296/ccs	chr11	-	2421	17	NNC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	1342	junction_9	1044.5656674397	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	False	NA	-13	True	AATAAA	-23	NA	5049096	5019688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
m54284U_201016_223608/23397950/ccs	chr2	+	1869	16	NNC	ENSMUSG00000027649.16	novel	2442	16	NA	NA	62	-514	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	147.611863419653	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATTGTATGTGTAAGCT	NA	False	NA	23	True	ATTAAA	-23	NA	157579382	157733020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_157579480_157616330_157616523_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
m54284U_201016_223608/23398839/ccs	chr7	+	5368	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_7	57.954223672848	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140808696	140842660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827139_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
m54284U_201016_223608/23399141/ccs	chr3	+	2634	14	NNC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	272.128972207652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_157742514_157746073_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201016_223608/23464720/ccs	chr2	+	5237	7	NIC	ENSMUSG00000027164.9	novel	6169	8	NA	NA	0	-729	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8426555195142	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCCCAATAAATAAATAAAT	NA	False	NA	NA	False	TTTAAA	-13	NA	101508784	101531285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_101508966_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
m54284U_201016_223608/23464754/ccs	chr4	-	2031	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	114.767972448763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	94445033	94388317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_94389654_94409298_94409373_94438658_94438744_94439501_94439703_94444698
m54284U_201016_223608/23528298/ccs	chr4	+	6496	10	NIC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	77.5370878999205	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	2	True	NA	7	True	AATAAA	-20	NA	32615450	32653265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_32615493_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
m54284U_201016_223608/23528588/ccs	chr14	+	778	5	NIC	ENSMUSG00000025290.18	novel	714	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	776	junction_1	5312.66281515212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540785	24545926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450_24543562_24545842
m54284U_201016_223608/23594000/ccs	chr10	+	664	6	NNC	ENSMUSG00000025400.12	novel	514	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	3.96988664825584	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACTGATGCAATAGGCT	NA	False	NA	6	True	AATAAA	-16	NA	127563715	127567636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127563897_127564039_127564146_127564315_127564346_127564982_127565037_127565344_127565419_127567417
m54284U_201016_223608/23594037/ccs	chr2	+	2416	10	NIC	ENSMUSG00000027259.16	novel	2477	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	40.8051679128399	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGCTTGAATTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	120970908	120987159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_120971091_120972573_120972785_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120981611_120981693_120982910_120983050_120985199_120985301_120985815
m54284U_201016_223608/23595727/ccs	chr9	+	2478	12	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	0	-386	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	23.3436419573877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCCTGTATGATGATGC	3155	False	NA	10	True	AATAAA	-21	NA	108685571	108695657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
m54284U_201016_223608/23595830/ccs	chr10	-	1672	6	NIC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	918	junction_5	149.900500332721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235256	80228372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231430_80235051
m54284U_201016_223608/2360568/ccs	chr1	-	2089	15	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_13	52.099394802392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATTGACATCTGCTT	NA	False	NA	-2	True	AATAAA	-34	NA	43866960	43788671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
m54284U_201016_223608/2361219/ccs	chr19	-	2750	17	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	495	junction_16	99.5576937006879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978275	4957258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
m54284U_201016_223608/23660136/ccs	chr3	-	1527	9	NIC	ENSMUSG00000028179.13	novel	1815	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	351.024838864716	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCCTGATCCTACTTT	NA	False	NA	-16	True	AATAAA	-18	NA	157630714	157599884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157630502
m54284U_201016_223608/23726885/ccs	chr13	+	3279	1	Antisense	novelGene_ENSMUSG00000038991.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATACCTTCTTGCCATCT	NA	False	NA	NA	False	NA	NA	NA	38688583	38691862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_+_38688600_38691900
m54284U_201016_223608/23791415/ccs	chr4	+	2628	21	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	115.97994438695	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155709399_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201016_223608/23856994/ccs	chr15	-	240	1	Intergenic	novelGene_7972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	3467	False	NA	NA	False	NA	NA	NA	99720328	99720088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99720100_99720300
m54284U_201016_223608/23857770/ccs	chr12	+	5726	15	NNC	ENSMUSG00000041781.10	novel	5732	15	NA	NA	-240	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	56.6248395051111	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATGTTTCTTGTGCTT	NA	False	NA	11	True	NA	NA	NA	101942006	101972683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_101942148_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
m54284U_201016_223608/24118181/ccs	chr4	-	3957	5	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	569.910738624918	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000073	134941279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134999828
m54284U_201016_223608/24183904/ccs	chr16	+	2336	12	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	141	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	14.4244970693081	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33337838	33483778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33410621_33410736_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33483294
m54284U_201016_223608/24185649/ccs	chr1	+	1135	9	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_5	1013.94981846983	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201016_223608/2426472/ccs	chr7	+	3663	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_12	71.3206764472189	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCTTTTATTTGGTTC	NA	False	NA	23	True	AATAAA	-25	NA	130467616	130515042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
m54284U_201016_223608/2427647/ccs	chr9	+	1406	10	NIC	ENSMUSG00000070284.11	novel	1429	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1655374700484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGACTGGAAGTCAAGC	NA	False	NA	29	True	NA	NA	NA	107926487	107928901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107926561_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
m54284U_201016_223608/24315815/ccs	chr5	+	4161	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	57.6288233911142	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	893	False	NA	4	True	TTTAAA	-7	NA	121849922	121953013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
m54284U_201016_223608/24379952/ccs	chr4	+	1240	2	NNC	ENSMUSG00000085918.2	novel	2001	3	NA	NA	3411	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTATGGGTGTTTTGC	NA	False	NA	NA	False	NA	NA	NA	140541714	140544822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_140542139_140544006
m54284U_201016_223608/24445320/ccs	chr8	-	2824	2	ISM	ENSMUSG00000045246.12	ENSMUST00000061828.10	3806	3	2537	0	2203	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCAGGCTGTTTGTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	120359882	120350592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_120353159_120359624
m54284U_201016_223608/24445469/ccs	chr1	-	6887	15	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	0	441	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	50.6746323849215	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30913002	30842185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30902067_30902245_30912658
m54284U_201016_223608/24446992/ccs	chr19	+	2515	4	NIC	ENSMUSG00000048832.10	novel	2686	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	51.9893151415643	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGTCCATGATGAGT	NA	False	NA	17	True	AATAAA	-20	NA	10666114	10691991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10666344_10683573_10683673_10688634_10688718_10689887
m54284U_201016_223608/24447788/ccs	chr4	+	5844	30	NIC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_29	29.8622282388044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317206	108416612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415914
m54284U_201016_223608/24641771/ccs	chr2	+	4876	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	63.2565234193442	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4642	False	NA	12	True	AATAAA	-16	NA	18069446	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201016_223608/24643045/ccs	chr12	+	241	1	Intergenic	novelGene_6594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGTAGAAATGCCTCTG	NA	False	NA	NA	False	NA	NA	NA	24805822	24806063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_24805800_24806100
m54284U_201016_223608/24644171/ccs	chr7	-	1407	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	212	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	378.048138550805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569717	46539121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_46539453_46540669_46540789_46542101_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
m54284U_201016_223608/24709978/ccs	chrX	+	176	1	Intergenic	novelGene_9472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAGGAAGTTGGAAAG	3043	False	NA	NA	False	NA	NA	NA	56377862	56378038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_56377900_56378000
m54284U_201016_223608/24773597/ccs	chr15	-	3787	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	0	-418	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	21.6347521363199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419135	102407877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417833_102418353_102418441_102419018
m54284U_201016_223608/24774782/ccs	chr3	+	4542	12	NIC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_9	113.551604753736	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATGTGCATTGTT	8	True	NA	16	True	AATAAA	-16	NA	88593109	88620231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88617250_88618067
m54284U_201016_223608/24840705/ccs	chr17	-	2661	8	NIC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	100.888501802328	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26160909	26145400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26153731_26153853_26153976_26154109_26155737_26156437_26160788
m54284U_201016_223608/24840997/ccs	chr10	+	4454	9	NNC	ENSMUSG00000078429.10	novel	4817	8	NA	NA	-90	0	at_least_one_novel_splicesite	TRUE	canonical	3	168	junction_8	83.7734109070414	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGACTGGGAGCTGCTT	NA	False	NA	13	True	AATAAA	-19	NA	126814807	126835838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229_126835253_126835393
m54284U_201016_223608/24904553/ccs	chr17	+	2595	6	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_3	772.893938389997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGCCTGTTTTTCCTTG	NA	False	NA	37	True	ATTAAA	-28	NA	29251646	29261084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29251761_29255214_29255423_29257463_29258884_29259748_29259788_29260180_29260268_29260357
m54284U_201016_223608/24904976/ccs	chr7	+	1717	4	NNC	ENSMUSG00000002083.14	novel	1814	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	95.7160151466595	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	False	NA	26	True	AATAAA	-19	NA	16043540	16052130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_16043690_16046050_16046340_16047551_16047743_16051042
m54284U_201016_223608/25035750/ccs	chr19	+	2179	14	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_2	203.151006300601	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352172	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_45352326_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
m54284U_201016_223608/25166685/ccs	chr2	-	202	1	Intergenic	novelGene_847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATCCATCTATAGTTG	NA	False	NA	NA	False	NA	NA	NA	71069340	71069138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_71069100_71069300
m54284U_201016_223608/25299481/ccs	chr17	-	3274	20	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	337	junction_19	103.932777123797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5674	False	NA	-17	True	TATAAA	-18	NA	25946393	25938019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
m54284U_201016_223608/25363638/ccs	chr4	-	3750	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_15	395.582510345629	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201016_223608/25428250/ccs	chr13	+	5754	24	NIC	ENSMUSG00000039219.19	novel	5864	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	13.4276750581372	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGTTTGTAGAAGGTA	1443	False	NA	9	True	AATAAA	-23	NA	14238383	14373952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344657_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
m54284U_201016_223608/25430567/ccs	chr6	-	174	1	Intergenic	novelGene_3510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAAGAAAAAG	8647	False	NA	NA	False	NA	NA	NA	125160346	125160172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_125160200_125160300
m54284U_201016_223608/25495540/ccs	chr8	-	3234	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	38	junction_9	864.074646981125	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCAATGTTTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	26337722	26306023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321394_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
m54284U_201016_223608/25559256/ccs	chr14	-	1401	9	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1299.59305529654	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
m54284U_201016_223608/25559507/ccs	chr6	-	2467	11	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	1216.17556709547	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8571	False	NA	-24	True	AATAAA	-16	NA	145021824	144944883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955859_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
m54284U_201016_223608/25561539/ccs	chr19	+	1909	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	121.95691862293	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTTCTCTGTGCCTCG	4139	False	NA	18	True	AATAAA	-24	NA	41921928	41932543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927158_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
m54284U_201016_223608/2556953/ccs	chr15	-	183	1	Intergenic	novelGene_7686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAGTTTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	37272474	37272291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_37272300_37272500
m54284U_201016_223608/2558184/ccs	chr3	-	2009	8	NIC	ENSMUSG00000042642.14	novel	3007	9	NA	NA	0	-415	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	114.072300739129	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTGCCTGTTGCTCT	3737	False	NA	-15	True	AGTAAA	-18	NA	89319177	89310388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89318867
m54284U_201016_223608/2558596/ccs	chr8	+	2429	8	NNC	ENSMUSG00000052794.14	novel	2887	8	NA	NA	0	-101	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	24.6833001465049	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGTGTCTGCTTGTTT	NA	False	NA	5	True	AGTAAA	-20	NA	73197723	73214384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_73197834_73198593_73199315_73203290_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
m54284U_201016_223608/25625207/ccs	chr5	-	1516	8	ISM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	839	2	54	0	3prime_fragment	FALSE	canonical	3	423	junction_6	64.4265124789793	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATCGTGTCTGAGGTTCT	4862	False	NA	-4	True	AATAAA	-19	NA	137608910	137603366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658
m54284U_201016_223608/25625569/ccs	chr10	+	1702	8	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	1293.22735031078	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGATTTCTTGG	846	False	NA	-1	True	TTTAAA	-22	NA	127894822	127912847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127895156_127904544_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
m54284U_201016_223608/25625630/ccs	chr15	+	2673	11	NIC	ENSMUSG00000023010.16	novel	944	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	719.435257684804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	False	NA	15	True	AATAAA	-20	NA	99291099	99307930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99291265_99297537_99297753_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
m54284U_201016_223608/25625906/ccs	chr16	-	1291	9	NIC	ENSMUSG00000033918.17	novel	1348	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	575.510208423795	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCGTTCCTTCAGAG	NA	False	NA	-16	True	AATAAA	-24	NA	20121129	20098569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20116342_20116484_20116880_20117077_20120958
m54284U_201016_223608/25626231/ccs	chr13	+	173	1	Intergenic	novelGene_7043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGGATTTCCT	NA	False	NA	NA	False	NA	NA	NA	44484824	44484997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_44484800_44485000
m54284U_201016_223608/25626706/ccs	chr1	+	671	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	-53	-135	-53	135	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGGCAGATGTGTTA	NA	False	NA	NA	False	AATAAA	-35	NA	43228262	43228933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_43228300_43228900
m54284U_201016_223608/25690388/ccs	chr12	+	2316	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	113.901516915077	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622416	3831398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3824569_3824611_3829618_3829655_3831105
m54284U_201016_223608/25690617/ccs	chr6	-	2957	17	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_14	89.544681584112	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCTGCTTAAGCTTGAC	NA	False	NA	-8	True	AATAAA	-25	NA	39354609	39312919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39349780_39349862_39354552
m54284U_201016_223608/25692426/ccs	chr1	+	5835	34	NIC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	0	2458	combination_of_known_splicesites	FALSE	canonical	3	14	junction_27	14.2043333317495	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGACTTGAAGTTTCTT	6174	False	NA	38	True	AATATA	-39	NA	136059126	136102495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
m54284U_201016_223608/25692628/ccs	chr9	-	172	1	Intergenic	novelGene_4728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCCATTTTTTATTA	NA	False	NA	NA	False	NA	NA	NA	43724411	43724239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_43724200_43724400
m54284U_201016_223608/25758459/ccs	chr16	-	186	1	Intergenic	novelGene_8083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAATTGCATTAAA	NA	False	NA	NA	False	NA	NA	NA	14021694	14021508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_14021500_14021700
m54284U_201016_223608/25889475/ccs	chr8	+	4250	2	ISM	ENSMUSG00000046794.10	ENSMUST00000211648.2	4386	3	902	-5	0	0	3prime_fragment	FALSE	canonical	3	26	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACTATTCCTTCTATT	NA	False	NA	NA	False	NA	NA	NA	35843813	35855293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_35843908_35851137
m54284U_201016_223608/25889628/ccs	chr17	-	827	8	NNC	ENSMUSG00000024099.16	novel	927	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	251	junction_2	1388.3332100187	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5516	False	NA	-11	True	AATAAA	-15	NA	66408490	66386435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_66386583_66387805_66387880_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
m54284U_201016_223608/25954536/ccs	chr1	+	179	1	Intergenic	novelGene_464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACACACATCTGAGCCAT	NA	False	NA	NA	False	NA	NA	NA	169982345	169982524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_169982300_169982500
m54284U_201016_223608/26018301/ccs	chr9	-	1794	13	NNC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_12	94.4161885836675	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGTACCAGTGTGTC	9807	False	NA	-9	True	AATAAA	-21	NA	57672404	57657991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672319
m54284U_201016_223608/26084403/ccs	chr15	-	2142	17	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	0	-777	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	170.527387371501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGTTGCATAGCTC	NA	False	NA	-5	True	AATAAA	-18	NA	99549537	99519154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537687_99540763_99540853_99549387
m54284U_201016_223608/26085844/ccs	chr4	+	2783	22	NIC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	155.880092297263	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155709399_155709641_155709797_155709987_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201016_223608/26151127/ccs	chr6	+	3194	9	NIC	ENSMUSG00000030232.19	novel	3727	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	123	junction_8	72.0736385580747	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCAAATTGTAACAATTC	NA	False	NA	NA	False	AATAAA	-20	NA	140569224	140598552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
m54284U_201016_223608/26216199/ccs	chr4	-	172	1	Intergenic	novelGene_2134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTTTTTAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	127394590	127394418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_127394400_127394600
m54284U_201016_223608/2623845/ccs	chr7	+	2384	2	NNC	ENSMUSG00000109511.2	novel	2414	2	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACTTGCTGTGAGT	383	False	NA	13	True	AATAAA	-13	NA	44465819	44480228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_44465886_44477910
m54284U_201016_223608/26280987/ccs	chr1	+	1439	8	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_4	1075.75672464189	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201016_223608/26281919/ccs	chr8	-	3484	21	NIC	ENSMUSG00000031537.16	novel	3580	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	24.678482530334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAGTCATGTCATTG	NA	False	NA	-1	True	NA	NA	NA	23196590	23149228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_23150476_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
m54284U_201016_223608/263037/ccs	chr2	+	1551	5	NNC	ENSMUSG00000032966.15	novel	1658	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	1034.53090214841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384513	151403610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401547_151402540
m54284U_201016_223608/26347318/ccs	chr10	-	9260	41	NIC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	0	0	intron_retention	TRUE	canonical	3	73	junction_29	43.2194328398696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGGCTACAGCCATTC	NA	False	NA	-16	True	AATAAA	-18	NA	76278560	76187096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
m54284U_201016_223608/26478254/ccs	chr10	-	1649	7	NIC	ENSMUSG00000034620.18	novel	1546	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_5	138.233799533013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATTCATAAGTGTAA	NA	False	NA	-10	True	AATAAA	-19	NA	121933031	121917164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932133_121932252_121932367_121932804
m54284U_201016_223608/26542497/ccs	chr8	-	190	1	Intergenic	novelGene_4414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTTGACTAGAGGTGA	NA	False	NA	NA	False	NA	NA	NA	95578334	95578144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_95578100_95578300
m54284U_201016_223608/26543789/ccs	chr2	-	2183	11	NNC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	181.518070725754	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101393	25089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_25090479_25090670_25090750_25093422_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
m54284U_201016_223608/26544313/ccs	chr17	+	184	1	Intergenic	novelGene_8670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	60761944	60762128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_60761900_60762100
m54284U_201016_223608/26607630/ccs	chr10	-	3634	1	Antisense	novelGene_ENSMUSG00000001785.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAGAAGAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	85716474	85712840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_-_85712800_85716500
m54284U_201016_223608/26608117/ccs	chr3	+	178	1	Intergenic	novelGene_1428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACTGGAATTAAT	1620	False	NA	NA	False	AATAAA	-6	NA	68871443	68871621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_68871400_68871600
m54284U_201016_223608/26608654/ccs	chr17	+	1227	7	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	175.009206107057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	4917	False	NA	29	True	AATACA	-19	NA	33848063	33850690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_33848191_33848595_33848673_33848754_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
m54284U_201016_223608/26609113/ccs	chr2	+	2160	22	ISM	ENSMUSG00000027570.16	ENSMUST00000103059.2	2846	32	6751	386	1788	197	3prime_fragment	FALSE	canonical	2	8	junction_11	3.68363421063118	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTAGTACTGGTTATAG	NA	False	NA	NA	False	AATAAA	-18	NA	180246765	180263592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_180247068_180247519_180247574_180248267_180248322_180248600_180248655_180248875_180248930_180249419_180249474_180250224_180250279_180251118_180251173_180251273_180251328_180251848_180251894_180251982_180252037_180252452_180252507_180253052_180253107_180253221_180253294_180254746_180254783_180255939_180255985_180257080_180257114_180257269_180257417_180257595_180257651_180258173_180258357_180261485_180261564_180263022
m54284U_201016_223608/26610221/ccs	chr11	+	2166	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	144.892752483422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268545	50277355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
m54284U_201016_223608/26740319/ccs	chr2	+	2121	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	82.0069683450306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390870	25395483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25390899_25391947_25392164_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
m54284U_201016_223608/26804370/ccs	chr10	+	1731	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	232.090260219788	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80438784_80444636_80444685_80445225_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
m54284U_201016_223608/26871133/ccs	chr13	-	2505	11	NNC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	474.493930414289	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259677	47238257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255160_47255209_47255448_47255551_47259047_47259214_47259548
m54284U_201016_223608/26871573/ccs	chr14	-	2462	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_12	150.58939759049	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3758	False	NA	-1	True	AATAAA	-24	NA	54891138	54879618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54890991
m54284U_201016_223608/2688176/ccs	chr17	+	1536	6	NIC	ENSMUSG00000040482.17	novel	1447	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	133	junction_1	20.3115730557729	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGCTGTGTCTGAATG	2976	False	NA	30	True	AATAAA	-19	NA	35055994	35058162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35056193_35056368_35056731_35056876_35057422_35057523_35057660_35057788_35057884_35057962
m54284U_201016_223608/2688691/ccs	chr16	+	4006	9	NNC	ENSMUSG00000022811.18	novel	653	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	46.8368177825949	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCACGAATGTTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	33201499	33319013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_33201588_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
m54284U_201016_223608/2689876/ccs	chr4	-	2652	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	112	junction_4	172.276828260668	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491418	94457403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
m54284U_201016_223608/26937954/ccs	chr16	-	197	1	Intergenic	novelGene_8145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGGATCAAGGAGAGG	NA	False	NA	NA	False	NA	NA	NA	20594971	20594774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20594800_20595000
m54284U_201016_223608/27001684/ccs	chr10	+	2115	12	NIC	ENSMUSG00000025395.15	novel	1536	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	557	junction_6	52.0176384579673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTGCAGAAGTTTGTAA	1008	False	NA	2	True	AATAAA	-12	NA	127851064	127865852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
m54284U_201016_223608/27067909/ccs	chr15	+	3275	12	NIC	ENSMUSG00000042535.10	novel	3449	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	65.8303605005803	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATGTTCCCTGCCC	NA	False	NA	17	True	AATAAA	-18	NA	79575045	79605680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_79575300_79578356_79578469_79591192_79591374_79592069_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
m54284U_201016_223608/27134633/ccs	chr12	+	2433	15	NIC	ENSMUSG00000021288.20	novel	2261	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_13	47.7933476713303	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725282	111761331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755921_111760082_111760134_111760770
m54284U_201016_223608/27198482/ccs	chr9	-	175	1	Intergenic	novelGene_4725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAGAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	43176186	43176011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_43176000_43176200
m54284U_201016_223608/27199495/ccs	chr11	+	780	3	NIC	ENSMUSG00000017716.16	novel	3334	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	950.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTCTTGGAGAAATGG	NA	False	NA	40	True	AATAAA	-29	NA	117740144	117746569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_117740288_117743488_117743607_117746050
m54284U_201016_223608/27265470/ccs	chr11	-	3014	6	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	175	junction_4	30.6502854799103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385014	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61380097_61380189_61380324_61380674_61382513_61383729_61383896_61384472_61384781_61384905
m54284U_201016_223608/27331123/ccs	chr1	-	203	1	Antisense	novelGene_ENSMUSG00000026017.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTGAAAAGATGCCT	NA	False	NA	NA	False	TTTAAA	-5	NA	60146830	60146627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_60146600_60146800
m54284U_201016_223608/27395885/ccs	chrX	+	4714	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	147	junction_5	195.307259516472	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158374327_158374354_158375066
m54284U_201016_223608/27395940/ccs	chr5	-	2927	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	64.898900483372	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911556	114867635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
m54284U_201016_223608/27461040/ccs	chr1	-	4608	15	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	2842	junction_5	200.874313429862	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287401	128259326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
m54284U_201016_223608/27525637/ccs	chr8	-	214	1	Intergenic	novelGene_4431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAATGACTATTAGGGTG	NA	False	NA	NA	False	NA	NA	NA	105210502	105210288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_105210300_105210500
m54284U_201016_223608/2753522/ccs	chr4	+	2698	1	Intergenic	novelGene_1754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTCTGAACTTCGGAGC	1717	False	NA	NA	False	ATTAAA	-33	NA	12235345	12238043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_12235300_12238000
m54284U_201016_223608/27591436/ccs	chr2	-	952	9	NNC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	108.788498932562	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	-5	True	AATAAA	-19	NA	26806357	26803394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804224_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
m54284U_201016_223608/27592613/ccs	chrX	+	4284	7	NIC	ENSMUSG00000041649.14	novel	4407	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	50.56349144063	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152142608	152178793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_152142706_152143291_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
m54284U_201016_223608/27723765/ccs	chr10	-	438	1	Intergenic	novelGene_5407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9974	False	NA	NA	False	NA	NA	NA	75424485	75424047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75424000_75424500
m54284U_201016_223608/27724181/ccs	chr1	-	3328	1	Antisense	novelGene_ENSMUSG00000026447.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGCAGTCCTTGAAGC	5457	False	NA	NA	False	NA	NA	NA	133025126	133021798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_133021800_133025100
m54284U_201016_223608/27788505/ccs	chr11	+	985	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8368	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	201.516128386787	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGAAAAAAAAACATGTA	9488	False	NA	5	True	AATAAA	-9	NA	104200490	104219261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_104200551_104201094_104201361_104212176_104212259_104213253_104213367_104218797
m54284U_201016_223608/27984938/ccs	chr17	-	2162	15	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_6	121.469929931449	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201016_223608/27985687/ccs	chr14	-	185	1	Intergenic	novelGene_7475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGAGAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	56199368	56199183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_56199200_56199400
m54284U_201016_223608/28051213/ccs	chr11	-	3191	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	388	junction_14	370.599266494863	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
m54284U_201016_223608/28052014/ccs	chr6	+	1308	6	NIC	ENSMUSG00000036371.7	novel	1336	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2466.11024895482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5871	False	NA	37	True	AATATA	-25	NA	67243993	67261295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_67244394_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
m54284U_201016_223608/28117404/ccs	chr2	-	181	1	Intergenic	novelGene_585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTTTTTTTGCCACTAA	8980	False	NA	NA	False	NA	NA	NA	6314183	6314002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_6314000_6314200
m54284U_201016_223608/28181920/ccs	chr2	-	4186	20	NIC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	51	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.186623243575	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740885	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
m54284U_201016_223608/28182187/ccs	chr5	+	2944	4	NNC	ENSMUSG00000102644.6	novel	650	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	5.24933858267454	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGGGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	92110748	92119925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_92110835_92112954_92113164_92114310_92114434_92117399
m54284U_201016_223608/2819780/ccs	chr17	+	2498	18	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_14	85.6016767290427	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9806	False	NA	11	True	AATAAA	-24	NA	34866184	34874048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872478_34872547_34872677_34872790_34872894_34872980_34873444
m54284U_201016_223608/2820700/ccs	chr13	-	189	1	Intergenic	novelGene_7177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATTTAACATTTTTGAC	NA	False	NA	NA	False	NA	NA	NA	65883706	65883517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_65883500_65883700
m54284U_201016_223608/28246249/ccs	chr9	+	3230	10	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	173.205152034684	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1163	False	NA	64	True	NA	NA	NA	108394301	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108394452_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201016_223608/28312465/ccs	chr10	-	2310	7	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	383.247816548104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTTGTAGTTTAAAT	5257	False	NA	-6	True	AATAAA	-17	NA	62322525	62291050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62316336_62316487_62322436
m54284U_201016_223608/28313171/ccs	chr7	+	2898	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	291.16989891574	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201016_223608/28313974/ccs	chr12	+	1589	9	NIC	ENSMUSG00000021113.6	novel	6275	10	NA	NA	0	278	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	28.297250308113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATCTTCTAGTGTGTG	NA	False	NA	3	True	AATAAA	-15	NA	74011299	74031159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_74011521_74014681_74014842_74015012_74015154_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
m54284U_201016_223608/28378796/ccs	chr5	+	1227	6	NNC	ENSMUSG00000054920.13	novel	3149	11	NA	NA	0	-3943	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	25.9121593079388	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAGAGGGCACTTAAA	NA	False	NA	23	True	AATAAA	-20	NA	65264881	65307054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65306880
m54284U_201016_223608/28445106/ccs	chr12	-	189	1	Intergenic	novelGene_6886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCAGTGCTAAATGGGAA	NA	False	NA	NA	False	NA	NA	NA	108577181	108576992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_108577000_108577200
m54284U_201016_223608/28509807/ccs	chr9	+	2795	15	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	128.768440327938	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201016_223608/28639800/ccs	chr10	+	3295	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	382	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	33.5120553120764	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103204085	103255238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_103204182_103224887_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
m54284U_201016_223608/28641745/ccs	chr5	+	1799	7	NIC	ENSMUSG00000029344.16	novel	442	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	87.1615677284942	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112436627	112463221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_112436679_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
m54284U_201016_223608/28705390/ccs	chr15	+	2959	1	Intergenic	novelGene_7898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCTGGCCTGGCTGCTT	NA	False	NA	18	True	NA	NA	NA	88592673	88595632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_88592700_88595600
m54284U_201016_223608/28705943/ccs	chr12	-	5531	27	NIC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	10.0899064920222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGAATTCTGAAGTT	NA	False	NA	-8	True	AATAAA	-18	NA	55033121	54940335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974410_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
m54284U_201016_223608/28706026/ccs	chr15	-	3620	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	0	1151	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	49.3316274559802	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCATCCTTTTGTAAGC	NA	False	NA	0	True	ATTAAA	-21	NA	77191204	76966537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77115586_77115638_77190563
m54284U_201016_223608/28838525/ccs	chr13	-	1920	5	NIC	ENSMUSG00000021495.11	novel	4786	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	62.8589691293136	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718933	55687131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55718587
m54284U_201016_223608/2884511/ccs	chr2	+	174	1	Intergenic	novelGene_877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGAATCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	76196483	76196657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_76196500_76196700
m54284U_201016_223608/28901807/ccs	chr7	-	228	1	Intergenic	novelGene_3967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTGGAGAAACTAAGAGC	NA	False	NA	NA	False	NA	NA	NA	99081061	99080833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_99080800_99081100
m54284U_201016_223608/29032689/ccs	chr18	+	3720	15	NNC	ENSMUSG00000037236.17	novel	1951	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	318.785610255737	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695351	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_35695361_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
m54284U_201016_223608/29032784/ccs	chr13	+	4540	27	NNC	ENSMUSG00000042426.7	novel	4682	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_25	61.9055995402506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTCCATCTCTGTGT	NA	False	NA	18	True	AATAAA	-18	NA	113064181	113105966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101933_113103069_113103167_113105668
m54284U_201016_223608/29035149/ccs	chr8	+	1857	1	NIC	ENSMUSG00000031839.8	novel	1208	4	NA	NA	0	803	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGATTTTTCCTTCC	NA	False	NA	NA	False	NA	NA	NA	120071226	120073083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_120071200_120073100
m54284U_201016_223608/29098020/ccs	chr11	+	2773	17	NIC	ENSMUSG00000020409.11	novel	1662	16	NA	NA	0	-946	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	62.6749738232893	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	14	True	AATAAA	-25	NA	43324570	43337862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_43324647_43327180_43327260_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
m54284U_201016_223608/29100752/ccs	chr3	+	4337	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	59	-222	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	256.061447398374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049954	31106886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_31050235_31072698_31072821_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
m54284U_201016_223608/29164291/ccschrUn	chrUn_GL456367v1	+	194	1	Intergenic	novelGene_9780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTGTTTTCAGGC	NA	False	NA	NA	False	NA	NA	NA	12382	12576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_GL456367v1_+_12400_12600
m54284U_201016_223608/29164582/ccs	chr9	+	2181	11	Fusion	ENSMUSG00000111394.2_ENSMUSG00000032294.18	novel	625	5	NA	NA	0	0	multi-exon	FALSE	canonical	3	209	junction_1	7672.28055013631	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	2536	False	NA	20	True	AATAAA	-20	NA	59564522	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_+_59564554_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59582479_59585326_59585509_59586010
m54284U_201016_223608/29229494/ccs	chr6	+	2788	12	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	411	junction_7	62.0754006986731	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACAATGCCTTGTGGGG	NA	False	NA	28	True	AATAAA	-22	NA	85408970	85423417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
m54284U_201016_223608/29231907/ccs	chr4	+	193	1	Intergenic	novelGene_2010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGCCAAGGGCTTGGCCC	NA	False	NA	NA	False	NA	NA	NA	115965211	115965404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_115965200_115965400
m54284U_201016_223608/29295279/ccs	chr11	-	174	1	Intergenic	novelGene_5842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	54288197	54288023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_54288000_54288200
m54284U_201016_223608/29296352/ccs	chr7	-	3085	7	NNC	ENSMUSG00000092416.3	novel	4069	7	NA	NA	0	-968	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_4	78.7541886011292	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGT	NA	False	NA	-21	True	NA	NA	NA	42155164	42123777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139462_42139701_42150781_42150850_42155033
m54284U_201016_223608/29491452/ccs	chrX	+	3813	24	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	0	-721	combination_of_known_splicesites	TRUE	canonical	3	8	junction_19	184.50908656371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATCTAAATTTGATTC	NA	False	NA	20	True	AATAAA	-24	NA	150799423	150844969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
m54284U_201016_223608/2951002/ccs	chr18	-	176	1	Intergenic	novelGene_9015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGTAGCAACAAAA	8931	False	NA	NA	False	NA	NA	NA	74207011	74206835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_74206800_74207000
m54284U_201016_223608/29623692/ccs	chr14	-	8973	45	NIC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	55	0	combination_of_known_splicesites	TRUE	canonical	3	69	junction_16	126.962452557849	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651761	14518184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
m54284U_201016_223608/29624957/ccs	chr17	-	156	1	Intergenic	novelGene_8487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCAGAGAAAGCAGGAAC	6115	False	NA	NA	False	NA	NA	NA	29392015	29391859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29391900_29392000
m54284U_201016_223608/30015738/ccs	chr7	+	4291	23	NIC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_5	32.7131282565666	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	122723403	122793210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
m54284U_201016_223608/30016484/ccs	chr6	+	4097	4	NNC	ENSMUSG00000036402.14	novel	4248	5	NA	NA	0	-55	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	150.139934727573	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873380	66998279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_66873512_66891436_66891460_66992716_66992828_66994447
m54284U_201016_223608/30081354/ccs	chr7	+	1742	9	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	271.883678022422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835206	63861175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63858023_63858199_63858616_63858741_63859704_63859778_63860585
m54284U_201016_223608/30082321/ccs	chr12	+	3005	7	NNC	ENSMUSG00000020605.10	novel	2959	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	51.6881675692481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTGTTGTTCTTTTCC	NA	False	NA	NA	False	AGTAAA	-24	NA	8363431	8393824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_8363498_8367784_8367997_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
m54284U_201016_223608/30146840/ccs	chr2	-	2964	19	NNC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	974.065485985236	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022116	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156012250_156012402_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
m54284U_201016_223608/30149162/ccs	chrX	-	3090	21	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_19	15.6232999075099	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134986004	134972847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
m54284U_201016_223608/3016429/ccs	chr2	+	3420	24	NIC	ENSMUSG00000002718.15	novel	3641	25	NA	NA	0	-117	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	183.567658006966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGACAGGATTTGGTGC	NA	False	NA	16	True	AATAAA	-28	NA	166747978	166788192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
m54284U_201016_223608/30212110/ccs	chr17	-	4098	27	NIC	ENSMUSG00000040356.17	novel	3951	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_19	16.3224262177268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTGGAGTATGGTAACT	5305	False	NA	-23	True	AATAAA	-13	NA	35069186	35058219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
m54284U_201016_223608/30213002/ccs	chr9	+	2575	11	Fusion	ENSMUSG00000111394.2_ENSMUSG00000032294.18	novel	718	3	NA	NA	262	0	multi-exon	FALSE	canonical	3	9	junction_1	5310.89104011747	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	2798	False	NA	20	True	AATAAA	-20	NA	59564784	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_+_59565210_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201016_223608/30278477/ccs	chr3	-	5370	26	NIC	ENSMUSG00000060671.13	novel	5559	27	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	41.9719144190493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	3862	False	NA	-7	True	TATAAA	-35	NA	89867886	89846795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89848739_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
m54284U_201016_223608/30279783/ccs	chr13	-	1382	7	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	203.272121934011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6441	False	NA	-22	True	AATAAA	-14	NA	55469759	55467697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55468050_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
m54284U_201016_223608/30343638/ccs	chr8	-	3829	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	101	junction_13	121.604892993662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73229005	73214332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73224072_73224714_73224900_73228455_73228630_73228901
m54284U_201016_223608/30344204/ccs	chr15	-	190	1	Intergenic	novelGene_7958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGGGGCTGGAGAGATG	NA	False	NA	NA	False	NA	NA	NA	99001763	99001573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99001600_99001800
m54284U_201016_223608/30410947/ccs	chr8	+	3063	23	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	0	-687	combination_of_known_splicesites	FALSE	canonical	2	5	junction_6	54.501876531497	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCACTATCTTTTCT	NA	False	NA	23	True	ATTAAA	-25	NA	85809898	85824224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
m54284U_201016_223608/30474504/ccs	chr5	-	3242	20	NIC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	233	combination_of_known_junctions	FALSE	canonical	3	165	junction_17	146.210507369935	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31337255	31314554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31337227
m54284U_201016_223608/30477033/ccs	chr14	+	2765	8	NIC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1534	junction_5	88.3409443518666	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
m54284U_201016_223608/30541766/ccs	chr2	-	3807	4	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_3	119.589111358667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26277324_26277567_26277684_26279160
m54284U_201016_223608/30606157/ccs	chr4	-	2537	9	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	0	0	intron_retention	TRUE	canonical	3	276	junction_3	16.3893067272536	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTTTGTGTCCT	NA	False	NA	1	True	ATTAAA	-41	NA	106536098	106519452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_106520429_106522852_106522936_106524692_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
m54284U_201016_223608/30671724/ccs	chr17	+	3033	9	NNC	ENSMUSG00000034265.9	novel	3078	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	4.789311015167	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGTCAACAGCTTGC	2715	False	NA	30	True	AATAAA	-31	NA	5542831	5804086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765293_5775501_5775605_5777099_5777210_5781746_5781850_5803011
m54284U_201016_223608/30673013/ccs	chr2	+	3658	11	NNC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	141.713125715299	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAACTTTTTCCTTTTA	NA	False	NA	27	True	AATAAA	-24	NA	60040256	60079555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071420_60073362_60073430_60073900_60074015_60075555_60075605_60078233
m54284U_201016_223608/30803857/ccs	chr18	+	2509	7	NIC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	0	1931	intron_retention	FALSE	canonical	3	1009	junction_2	97.2585329018602	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422321	67451910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
m54284U_201016_223608/3082246/ccs	chr12	-	6413	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_5	192.746171777013	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8772	False	NA	-24	True	AATAAA	-25	NA	101049961	101005770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
m54284U_201016_223608/3082384/ccs	chr4	-	197	1	Intergenic	novelGene_1787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATATCCCTTCTAGCCGT	NA	False	NA	NA	False	NA	NA	NA	33011625	33011428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_33011400_33011600
m54284U_201016_223608/30868424/ccs	chr16	-	4039	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_17	350.8684683735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
m54284U_201016_223608/30933158/ccs	chr17	-	2932	2	Intergenic	novelGene_8548	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	307	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	274	False	NA	-17	True	NA	NA	NA	35219329	35215700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35218446_35219142
m54284U_201016_223608/30934880/ccs	chr10	+	3453	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	348	junction_6	43.3330228007683	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289312	93320737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93318195_93318823_93318929_93320524
m54284U_201016_223608/31001158/ccs	chr4	-	1705	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	121.196248342285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9080	False	NA	NA	False	AATAAA	-14	NA	155976238	155973318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155973626_155973890_155974054_155974125_155974643_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
m54284U_201016_223608/31065463/ccs	chr16	+	3116	6	NIC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	432	junction_3	59.3464404998312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104095	48114600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48111678_48113273_48113470_48114061
m54284U_201016_223608/31195420/ccs	chr13	-	3200	7	NIC	ENSMUSG00000094870.9	novel	2561	8	NA	NA	0	-73	intron_retention	FALSE	canonical	3	47	junction_6	45.1568254961405	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTATTTTCTTTACCT	NA	False	NA	2	True	AATAAA	-23	NA	120252274	120226796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252040
m54284U_201016_223608/31197037/ccs	chr11	-	3219	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	341	junction_14	378.799506766483	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
m54284U_201016_223608/31262506/ccs	chr5	+	205	1	Intergenic	novelGene_2965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGTGCTGGAAACTACCTC	NA	False	NA	NA	False	NA	NA	NA	134645372	134645577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_134645400_134645600
m54284U_201016_223608/31328005/ccs	chr11	+	2622	5	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	0	0	intron_retention	TRUE	canonical	3	43	junction_1	113.778293184597	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575272	113585473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_113576098_113578599_113580048_113582554_113582660_113583220_113583329_113585337
m54284U_201016_223608/31328111/ccs	chr4	+	202	1	Intergenic	novelGene_1864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCCATGGATCTAAAAT	NA	False	NA	NA	False	NA	NA	NA	51782154	51782356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_51782200_51782400
m54284U_201016_223608/31458192/ccs	chr4	+	1512	7	NNC	ENSMUSG00000028899.12	novel	3787	6	NA	NA	0	617	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	223.982886251011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTGTCCATAGGACCT	NA	False	NA	26	True	AATAAA	-22	NA	132001685	132020640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_132001799_132003933_132004096_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
m54284U_201016_223608/31458715/ccs	chr11	+	2518	14	NIC	ENSMUSG00000036620.15	novel	2429	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	193	junction_13	11.5957551915146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCTCATAGGTGAAT	NA	False	NA	13	True	AATAAA	-13	NA	50116161	50125930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_50116567_50121506_50121693_50121787_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
m54284U_201016_223608/31460113/ccs	chr6	-	3012	15	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	0	221	intron_retention	FALSE	canonical	3	14	junction_14	37.9085903785645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCGTTTCACCAATTAA	6193	False	NA	-2	True	ATTAAA	-19	NA	142332800	142307625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332587
m54284U_201016_223608/3147283/ccs	chr4	-	3675	4	NIC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1140	junction_2	50.6315667894601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	9	True	NA	-7	True	AATAAA	-21	NA	55532466	55527142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_55528301_55529717_55529883_55529998_55531751_55531866
m54284U_201016_223608/3147311/ccs	chr8	-	2190	14	NNC	ENSMUSG00000031591.15	novel	2773	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_11	385.543296059074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCAGTCATGCATGCTG	7639	False	NA	-21	True	AATAAA	-18	NA	41827672	41793697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807157_41807863_41807955_41813289_41813337_41827546
m54284U_201016_223608/31524610/ccs	chr2	+	2936	15	NIC	ENSMUSG00000042133.17	novel	6245	14	NA	NA	0	1065	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	126.877813631213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTGGTGTAATACTG	NA	False	NA	NA	False	AATAAA	-21	NA	69553436	69580957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_69553708_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
m54284U_201016_223608/31588866/ccs	chr17	+	2446	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_1	222.120210145547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5569	False	NA	12	True	AATAAA	-23	NA	34128418	34134564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34128438_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
m54284U_201016_223608/31589388/ccs	chr16	-	1372	6	NIC	ENSMUSG00000049916.13	novel	1156	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	255	junction_4	29.3011945148999	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	False	NA	NA	False	AATAAA	-17	NA	16943004	16931262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16939416_16942853
m54284U_201016_223608/31590381/ccs	chr11	+	3890	6	NIC	ENSMUSG00000042331.14	novel	2690	6	NA	NA	0	1194	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	7.07106781186548	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTGTGGTTTGAATTT	NA	False	NA	NA	False	AATAAA	-12	NA	61967884	62030543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62028875
m54284U_201016_223608/31654387/ccs	chr3	+	747	6	NIC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_1	1712.2576208036	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96537382_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
m54284U_201016_223608/31655202/ccs	chr16	+	1507	1	NIC	ENSMUSG00000053414.9	novel	5393	11	NA	NA	426	-94079	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACCCACAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	90183326	90184833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_90183300_90184800
m54284U_201016_223608/31655203/ccs	chr13	+	3746	12	NNC	ENSMUSG00000039242.11	novel	2397	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	13	junction_9	58.0022798070034	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGACTCACTTCAAC	NA	False	NA	NA	False	AATAAA	-34	NA	14129205	14173671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169706_14169861_14170311_14170369_14171477
m54284U_201016_223608/31655334/ccs	chr4	+	1074	7	NIC	ENSMUSG00000028277.14	novel	3530	8	NA	NA	0	-2336	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	28.5214344348636	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGATTGTTTACAAAAAGA	-32	True	NA	23	True	ATTAAA	-23	NA	33031415	33050027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33049681
m54284U_201016_223608/31720421/ccs	chr14	-	3230	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	0	-373	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	125.363145969407	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGACTTTAAGTAGAAAT	NA	False	NA	-25	True	AATAAA	-15	NA	67952824	67914176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
m54284U_201016_223608/31785157/ccs	chr8	-	1675	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_1	344.430828404711	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
m54284U_201016_223608/31851680/ccs	chr17	-	179	1	Intergenic	novelGene_8358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCACAAAGTTTAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	7283150	7282971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_7283000_7283200
m54284U_201016_223608/31916497/ccs	chr14	+	4499	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_38	176.407304781434	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
m54284U_201016_223608/31916871/ccs	chr13	+	3953	7	NIC	ENSMUSG00000074794.11	novel	4101	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	74.3721871550261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGCAGTTTATTTGA	NA	False	NA	30	True	AATAAA	-30	NA	81031528	81044161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_81032049_81035524_81035607_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
m54284U_201016_223608/31918440/ccs	chr11	-	3368	5	NIC	ENSMUSG00000020326.8	novel	3512	6	NA	NA	65	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	308.372339875028	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCCTTGTTTTGGTTTCT	NA	False	NA	-5	True	AATAAA	-16	NA	40646073	40639378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_40641887_40642087_40642187_40642930_40643185_40644634_40644896_40645827
m54284U_201016_223608/31918819/ccs	chr18	+	1726	1	Genic_Genomic	ENSMUSG00000024576.15	novel	NA	NA	NA	NA	5827	335	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGGCCTCCCGACTGG	NA	False	NA	100	True	AAAACA	-35	NA	61721741	61723467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr18_+_61721700_61723500
m54284U_201016_223608/31983575/ccs	chr14	+	3617	12	NIC	ENSMUSG00000035469.18	novel	3903	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	90.3297906251319	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438682	59474714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_59438754_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
m54284U_201016_223608/32049480/ccs	chrX	-	546	7	NNC	ENSMUSG00000001134.10	novel	875	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	227.131386353068	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACATAGTCCTTTTTTCCC	NA	False	NA	-8	True	ATTAAA	-20	NA	20828230	20818161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827960_20828026_20828172
m54284U_201016_223608/32113326/ccs	chr9	+	1772	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	766	junction_8	68.7216608258755	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799562	20803474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20799614_20799702_20799874_20800633_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
m54284U_201016_223608/3211481/ccs	chr17	+	237	1	Intergenic	novelGene_8460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAGAAAATTACTGTGC	2675	False	NA	NA	False	NA	NA	NA	28695309	28695546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_28695300_28695500
m54284U_201016_223608/32115160/ccs	chr13	+	2278	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	45.0175891550551	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730364	68740398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_68730384_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
m54284U_201016_223608/3211700/ccs	chr2	+	3172	8	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1115	junction_3	88.7849959745681	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8663	False	NA	NA	False	AATAAA	-16	NA	72306596	72317237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
m54284U_201016_223608/32178793/ccs	chr15	-	3348	1	Intergenic	novelGene_7740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGGCTATCTCTACAAAAG	NA	False	NA	NA	False	NA	NA	NA	61935952	61932604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_61932600_61936000
m54284U_201016_223608/32244711/ccs	chr11	+	3758	4	NIC	ENSMUSG00000035007.6	novel	3223	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	54	junction_2	2.35702260395516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCTGCACTCTCTAAG	NA	False	NA	35	True	AATAAA	-39	NA	101315910	101326499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101316437_101320277_101320437_101322173_101323025_101324277
m54284U_201016_223608/32245134/ccs	chr1	+	1821	6	NIC	ENSMUSG00000053332.14	novel	1614	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	897.552984508436	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201016_223608/32245368/ccs	chr11	+	783	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	287	junction_1	154.183786436836	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654677	4687669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_4654713_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
m54284U_201016_223608/32245432/ccs	chr12	+	2693	1	NIC	ENSMUSG00000071454.14	novel	2820	20	NA	NA	0	-21727	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTCTCTGGCACTT	NA	False	NA	NA	False	NA	NA	NA	3622432	3625125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_3622400_3625100
m54284U_201016_223608/32245566/ccs	chr11	+	3954	23	NNC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_16	96.2792512168433	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5272	False	NA	21	True	AATAAA	-21	NA	68906922	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924216_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
m54284U_201016_223608/32246492/ccs	chr7	-	4667	32	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	24	junction_10	39.0660477577263	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
m54284U_201016_223608/32376585/ccs	chr11	+	2872	10	NIC	ENSMUSG00000059248.14	novel	778	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	199.641345083293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117217258	117253139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_117217336_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
m54284U_201016_223608/32441797/ccs	chr16	-	7536	33	NIC	ENSMUSG00000022533.15	novel	7310	34	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_27	57.6385474178305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207655	30131240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30162707_30162726_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
m54284U_201016_223608/32506980/ccs	chr18	+	2855	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	200	junction_1	171.970666103263	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-35	True	NA	72	True	ATTAAA	-28	NA	3382987	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_3383173_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
m54284U_201016_223608/32507241/ccs	chr17	-	193	1	Intergenic	novelGene_8616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAAAAG	2036	False	NA	NA	False	NA	NA	NA	46750164	46749971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_46750000_46750200
m54284U_201016_223608/32507648/ccs	chr6	-	1266	5	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5441	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	37.4799946638203	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2725	False	NA	-11	True	NA	NA	NA	83675084	83669787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_83670449_83671329_83671456_83672566_83672825_83673961_83674051_83674952
m54284U_201016_223608/32573503/ccs	chr11	-	3257	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_13	76.2771530776592	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442705	101379589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
m54284U_201016_223608/32639260/ccs	chr12	+	4200	23	NIC	ENSMUSG00000020661.16	novel	2613	19	NA	NA	0	426	intron_retention	FALSE	canonical	2	4	junction_1	39.0183258490945	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAACATACAAAA	123	False	NA	-15	True	NA	NA	NA	3856526	3958973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_3856603_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
m54284U_201016_223608/32768561/ccs	chr14	-	1828	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	249.473457339974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741050	30734390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30740885
m54284U_201016_223608/32769924/ccs	chr18	-	195	1	Intergenic	novelGene_8949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAAATGTCTGCCAAGG	7854	False	NA	NA	False	NA	NA	NA	46733710	46733515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_46733500_46733700
m54284U_201016_223608/32770596/ccs	chr9	-	2719	8	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	122.011039982253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8714	False	NA	-1	True	AATAAA	-16	NA	122942269	122905896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122941498_122941754_122942060
m54284U_201016_223608/328203/ccs	chr2	+	3810	12	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	35.533013400531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGGTGTTTCTTTTC	1582	False	NA	23	True	ATTAAA	-23	NA	32425343	32459768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32425642_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
m54284U_201016_223608/32833570/ccs	chr11	-	2754	4	Intergenic	novelGene_6529	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	27.2070252365491	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTTGTCTTGCTTGGTT	NA	False	NA	-2	True	NA	NA	NA	121816149	121795184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_121797657_121798775_121798837_121799014_121799142_121816055
m54284U_201016_223608/32834444/ccs	chr17	+	196	1	Intergenic	novelGene_8722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTACGGGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	74652031	74652227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_74652000_74652200
m54284U_201016_223608/32900097/ccs	chr12	-	187	1	Intergenic	novelGene_6766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATAATCCCTCATGGG	NA	False	NA	NA	False	NA	NA	NA	80977690	80977503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80977500_80977700
m54284U_201016_223608/32901910/ccs	chr4	+	1602	4	ISM	ENSMUSG00000028801.15	ENSMUST00000063707.3	2380	9	29422	105	29422	-105	3prime_fragment	FALSE	canonical	3	11	junction_1	4.02768199119819	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAAGCCGGGTTCTTTGT	NA	False	NA	6	True	ATTAAA	-18	NA	135252719	135265009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_135252843_135256802_135256969_135260949_135261141_135263887
m54284U_201016_223608/32966620/ccs	chr12	+	3613	7	NNC	ENSMUSG00000043061.11	novel	762	3	NA	NA	-2969	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	79.2983115975506	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30631455	30641214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_30631943_30633078_30633302_30633704_30633774_30635468_30635590_30637198_30637254_30638472_30638567_30638650
m54284U_201016_223608/330298/ccs	chr11	+	1950	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	53.6563688406117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51153976	51172593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_51154097_51157997_51158159_51158991_51159059_51161363_51161423_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
m54284U_201016_223608/33095994/ccs	chr5	-	1321	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	0	419	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	576.721628460988	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047607	25008245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_25008732_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
m54284U_201016_223608/33097302/ccs	chr19	-	1516	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	0	585	combination_of_known_splicesites	FALSE	canonical	3	40	junction_4	328.565569305935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATGTTTAGTGAAAACT	NA	False	NA	-14	True	AATAAA	-16	NA	41921737	41911419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41919794_41919870_41921487_41921604_41921690
m54284U_201016_223608/33163648/ccs	chr17	+	4143	1	Intergenic	novelGene_8662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGGCACAATGGTACAAG	NA	False	NA	NA	False	AAAAAG	-6	NA	57215869	57220012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_57215900_57220000
m54284U_201016_223608/33293429/ccs	chr6	-	3591	19	NNC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_13	20.1913684039664	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797660	148743990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777980_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
m54284U_201016_223608/33294572/ccs	chr4	+	3922	11	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	113	junction_4	18.720042734994	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931917	155943760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155932362_155937874_155937945_155938093_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
m54284U_201016_223608/33294781/ccs	chr15	-	938	4	NIC	ENSMUSG00000064284.13	novel	997	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	153.805793851279	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGGTTTGAGTCACTG	8086	False	NA	0	True	ATTAAA	-15	NA	85695897	85691172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_85691740_85692456_85692569_85693412_85693526_85695751
m54284U_201016_223608/33359437/ccs	chr8	+	748	5	NIC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	382.667610335654	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343478	61360614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_61343571_61353117_61353269_61357033_61357122_61358581_61358755_61360370
m54284U_201016_223608/33360030/ccs	chr11	+	3930	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	36.2425164689209	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGTTTTAAGTA	NA	False	NA	25	True	AATAAA	-33	NA	84771135	84801957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_84771338_84771983_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
m54284U_201016_223608/33424628/ccs	chr7	+	4109	12	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	213	-68	intron_retention	FALSE	canonical	3	13	junction_1	95.1843795782821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109821174	109882645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109821524_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
m54284U_201016_223608/33425575/ccs	chr1	+	2382	6	NIC	ENSMUSG00000026005.16	novel	2713	7	NA	NA	0	-299	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	305.506530208439	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCAAAAGTTTGTAAGT	NA	False	NA	11	True	NA	NA	NA	66739989	66758665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_66740177_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
m54284U_201016_223608/3342735/ccs	chr11	+	197	1	Intergenic	novelGene_6507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCATAAATTAGGCCGG	6	True	NA	NA	False	NA	NA	NA	120232975	120233172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120233000_120233200
m54284U_201016_223608/3343407/ccs	chr10	-	189	2	Intergenic	novelGene_5470	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	439	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACAAAGCTTAGACCCA	NA	False	NA	NA	False	NA	NA	NA	81879618	81873334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_81873475_81879569
m54284U_201016_223608/33489804/ccs	chr15	-	3047	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	175.453380955993	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79802252_79802477_79802678_79802953_79803129_79805572_79805640_79807672_79807739_79814786_79814831_79855069
m54284U_201016_223608/33555148/ccs	chr3	-	4692	13	NIC	ENSMUSG00000028273.16	novel	5016	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	45.7355775688419	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACGCCTGGCCTTTTTT	7000	False	NA	-4	True	AATAAA	-19	NA	142101457	141945350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142017976_142020166_142020210_142058494_142058647_142097473_142097612_142101346
m54284U_201016_223608/33621038/ccs	chr13	-	157	1	Intergenic	novelGene_6991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	22291277	22291120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_22291100_22291300
m54284U_201016_223608/33621623/ccs	chr19	-	1893	14	NIC	ENSMUSG00000024830.18	novel	1979	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_5	10.8698595277881	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTGGCTTTTGCCGGA	2749	False	NA	-2	True	AGTAAA	-14	NA	4213353	4206793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
m54284U_201016_223608/33688129/ccs	chr4	-	3692	1	Genic_Genomic	ENSMUSG00000028675.13	novel	NA	NA	NA	NA	-243	516	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-37	NA	135601404	135597712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_-_135597700_135601400
m54284U_201016_223608/33751536/ccs	chr19	+	3016	5	ISM	ENSMUSG00000025202.9	ENSMUST00000026220.7	3489	6	12327	0	12327	0	3prime_fragment	FALSE	canonical	3	12	junction_1	133.013157243936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTGGCTCCAGAGTCT	760	False	NA	NA	False	NA	NA	NA	44204034	44232455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_44204124_44222661_44222793_44224209_44224416_44226814_44227048_44230098
m54284U_201016_223608/33752955/ccs	chr19	+	2241	8	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	145.434745869488	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800022	60824665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60814268_60814370_60819224_60819333_60821021_60821117_60823263
m54284U_201016_223608/33817738/ccs	chr1	+	3046	20	NIC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	346	combination_of_known_junctions	FALSE	canonical	3	166	junction_4	54.1975457121338	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059759	159173016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
m54284U_201016_223608/33819346/ccs	chr5	-	165	1	FSM	ENSMUSG00000107029.2	ENSMUST00000201893.2	3471	1	2780	526	2780	-526	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAAAAATAT	NA	False	NA	NA	False	NA	NA	NA	135643373	135643208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_135643200_135643400
m54284U_201016_223608/33819459/ccs	chr10	-	200	1	Intergenic	novelGene_5285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATTCCTTTTTGTTTGT	351	False	NA	NA	False	CATAAA	-10	NA	43373600	43373400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_43373400_43373600
m54284U_201016_223608/33883183/ccs	chr9	+	2273	11	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	38	junction_1	5302.45371596962	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1872	False	NA	20	True	AATAAA	-20	NA	59563858	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59563982_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201016_223608/33949072/ccs	chr4	+	2225	5	NIC	ENSMUSG00000028797.21	novel	1437	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_2	271.708023436924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3176	False	NA	16	True	AATAAA	-16	NA	129494472	129502321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129494525_129494775_129494928_129495199_129496055_129500879_129500973_129501248
m54284U_201016_223608/34013366/ccs	chr1	-	171	1	Intergenic	novelGene_311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATG	NA	False	NA	NA	False	NA	NA	NA	132020667	132020496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_132020500_132020700
m54284U_201016_223608/34079603/ccs	chr2	-	2703	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_15	762.364351766457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022158	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019827_156020799_156020873_156021096_156021161_156021806
m54284U_201016_223608/3408707/ccs	chr4	+	2602	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_5	54.3310166939659	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8271	False	NA	22	True	NA	NA	NA	156194454	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
m54284U_201016_223608/34145212/ccs	chrX	-	2509	7	NNC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	82.8653526310404	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508689_69510759_69510968_69513723_69513901_69520583
m54284U_201016_223608/34146081/ccs	chr10	-	3090	3	NIC	ENSMUSG00000048696.12	novel	3266	2	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	2	28	junction_1	22	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCGTTCGCGTGGTG	NA	False	NA	0	True	AATAAA	-20	NA	80223493	80216188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80216897_80217072_80218456_80222494
m54284U_201016_223608/34146292/ccs	chr5	+	2069	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	239.805927059907	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815929	33829545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33816072_33818686_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
m54284U_201016_223608/34210405/ccs	chr1	+	210	1	Intergenic	novelGene_256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGGACCGAGATCA	NA	False	NA	NA	False	NA	NA	NA	93791972	93792182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_93792000_93792200
m54284U_201016_223608/34278207/ccs	chr19	-	219	1	Intergenic	novelGene_9152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTGGCCAGTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	8827317	8827098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_8827100_8827300
m54284U_201016_223608/34341906/ccs	chr9	+	5812	32	NIC	ENSMUSG00000037286.16	novel	6186	34	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	78.9085536143374	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525668	100840597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_100525850_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
m54284U_201016_223608/34406933/ccs	chr3	-	202	1	Intergenic	novelGene_1422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCCCCTAACTATAGCC	9889	False	NA	NA	False	NA	NA	NA	63919505	63919303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_63919300_63919500
m54284U_201016_223608/34472719/ccs	chr5	+	4382	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	44.337907032245	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	NA	False	NA	19	True	AATAAA	-30	NA	73649998	73718137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_73650420_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
m54284U_201016_223608/34473820/ccs	chr5	-	2174	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	470	intron_retention	FALSE	canonical	3	1613	junction_6	128.157985064538	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117527112	117517211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_117517972_117518831_117518887_117519900_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
m54284U_201016_223608/34539069/ccs	chr5	+	2016	17	NIC	ENSMUSG00000029227.16	novel	1969	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	220.557452478374	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696163	74756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
m54284U_201016_223608/34539566/ccs	chr7	-	4506	25	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_18	144.586743475634	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGATGGGGCATCTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	125799594	125700887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125748675_125748710_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
m54284U_201016_223608/34539773/ccs	chr11	-	178	1	Intergenic	novelGene_5791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCACCAGCTCAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	48573934	48573756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_48573800_48573900
m54284U_201016_223608/34539880/ccs	chr8	+	2153	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	156.933704155608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415917	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201016_223608/34605863/ccs	chr12	-	1643	3	NIC	ENSMUSG00000056459.15	novel	1672	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	31	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGTAGAAACTTTA	NA	False	NA	-12	True	ATTAAA	-19	NA	76416376	76395673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_76396974_76402662_76402843_76416213
m54284U_201016_223608/34668633/ccs	chr2	+	3521	1	NIC	ENSMUSG00000033943.16	novel	11982	25	NA	NA	417	28	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATAGTCCTCCTAG	NA	False	NA	NA	False	NA	NA	NA	119789211	119792732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_119789200_119792700
m54284U_201016_223608/34736506/ccs	chr13	-	901	1	FSM	ENSMUSG00000049233.8	ENSMUST00000061241.8	586	1	-10	-305	-10	305	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGTCAAGTGTTCTG	NA	False	NA	NA	False	ATTAAA	-38	NA	107551239	107550338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_107550300_107551200
m54284U_201016_223608/3474694/ccs	chrX	-	3204	11	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	1240	junction_8	164.27967007515	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585609	93579079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_93579284_93579465_93579852_93580479_93580963_93581147_93581191_93581281_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
m54284U_201016_223608/3475076/ccs	chr5	+	2411	9	NNC	ENSMUSG00000029364.16	novel	2421	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	203.014777787234	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCTGTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	117495369	117516666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117513998_117514561_117514673_117514755_117514864_117515454
m54284U_201016_223608/34800823/ccs	chr1	-	193	1	Intergenic	novelGene_243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAGACTGGAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	89874717	89874524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_89874500_89874700
m54284U_201016_223608/34930773/ccs	chr9	+	3541	21	NNC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	70.4623835815962	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	17	True	AATAAA	-18	NA	70450075	70499516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480966_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
m54284U_201016_223608/34932165/ccs	chr8	+	3032	23	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	0	-687	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	54.9261901431035	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCACTATCTTTTCT	NA	False	NA	23	True	ATTAAA	-25	NA	85809943	85824224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85810118_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
m54284U_201016_223608/35063682/ccs	chr12	-	1617	12	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1825	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	74.9526572340586	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9497	False	NA	-3	True	AATATA	-18	NA	110805536	110774231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777176_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
m54284U_201016_223608/35193103/ccs	chr8	+	2197	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	67.3046040195039	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677313	122752916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122750741_122750886_122752302
m54284U_201016_223608/35259384/ccs	chr6	-	3105	12	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	615	junction_1	2828.42684716294	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446874	51438100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_51438414_51438899_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
m54284U_201016_223608/35261231/ccs	chr4	-	176	1	Intergenic	novelGene_1924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATCTTTTTAAA	498	False	NA	NA	False	NA	NA	NA	86632664	86632488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_86632500_86632700
m54284U_201016_223608/35391195/ccs	chr7	+	3498	12	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	66.4602037138463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCTTTTATTTGGTTC	NA	False	NA	23	True	AATAAA	-25	NA	130467616	130515042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
m54284U_201016_223608/35391932/ccs	chr11	+	1275	5	NIC	ENSMUSG00000001313.13	novel	1578	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	68.3245929369506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGGACTTAGTTTTGTT	7809	False	NA	21	True	AATAAA	-21	NA	101355824	101362679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101355971_101359758_101359847_101360838_101360949_101361543_101361679_101361883
m54284U_201016_223608/3540114/ccs	chr12	+	2537	4	NIC	ENSMUSG00000037957.15	novel	1351	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	63.2525800966956	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGTTTATCCTTTTT	5372	False	NA	NA	False	ATTAAA	-15	NA	110704451	110770672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_110704712_110745729_110745913_110759547_110760808_110769838
m54284U_201016_223608/35457210/ccs	chr2	+	2610	12	NNC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_4	61.0294604377453	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367055	180384073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377747_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
m54284U_201016_223608/35457766/ccs	chr1	-	184	1	Intergenic	novelGene_450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAATACAAGACTCTG	7439	False	NA	NA	False	NA	NA	NA	165594519	165594335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_165594300_165594500
m54284U_201016_223608/35521223/ccs	chr1	+	3869	23	NNC	ENSMUSG00000026496.12	novel	3873	23	NA	NA	0	0	intron_retention	FALSE	canonical	1	11	junction_15	462.566298576228	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3147	False	NA	10	True	ATTAAA	-18	NA	180396493	180428819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421611_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
m54284U_201016_223608/35587921/ccs	chr5	+	2506	16	NIC	ENSMUSG00000056310.15	novel	4698	9	NA	NA	0	-406	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	68.4530658350831	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTGGCTTTGTCCTTAC	3512	False	NA	20	True	AATAAA	-23	NA	130284459	130369998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_130284487_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
m54284U_201016_223608/35588045/ccs	chr4	+	1531	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-124	at_least_one_novel_splicesite	FALSE	canonical	3	304	junction_4	2093.78108268802	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCTTTTCTTTCTTTT	6	True	NA	29	True	AATAAA	-25	NA	46450959	46472533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469885_46470008_46471397_46471468_46472086
m54284U_201016_223608/35588359/ccs	chr17	+	1956	13	NIC	ENSMUSG00000019487.12	novel	2016	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	103.173666967669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGAGTCTGCACCGC	NA	False	NA	13	True	ATTAAA	-23	NA	57556454	57570427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_57556572_57557741_57557858_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
m54284U_201016_223608/35652694/ccs	chr7	-	3059	9	NIC	ENSMUSG00000030583.17	novel	4321	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	24.1631822200636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTTCTCCTGCAGC	1021	False	NA	-1	True	AATAAA	-17	NA	29041293	29019796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031372_29031469_29031649_29031816_29038380_29038603_29041243
m54284U_201016_223608/35719647/ccs	chr13	-	195	1	Intergenic	novelGene_7270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTACCAAGGTGTTTCTG	3931	False	NA	NA	False	NA	NA	NA	97584168	97583973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_97584000_97584200
m54284U_201016_223608/35784837/ccs	chr9	-	1633	6	NNC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	0	-1002	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_4	309.593669185919	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTAAGTCTGTCGTC	-3	True	NA	33	True	AGTAAA	-12	NA	4309471	4295966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308733_4308920_4309253
m54284U_201016_223608/35850570/ccs	chr9	+	1342	13	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	171.959055204042	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9118	False	NA	7	True	NA	NA	NA	15217555	15228274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15225561_15226397_15226428_15226678_15226737_15228184
m54284U_201016_223608/35916004/ccs	chr13	+	5404	33	NIC	ENSMUSG00000037851.14	novel	4426	34	NA	NA	0	0	intron_retention	FALSE	canonical	1	598	junction_16	243.941941655053	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGAAGTAGTTATTCTC	NA	False	NA	30	True	ATTAAA	-31	NA	49835605	49887743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
m54284U_201016_223608/35916190/ccs	chr1	-	197	1	Intergenic	novelGene_203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACATGGACAAAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	75606787	75606590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_75606600_75606800
m54284U_201016_223608/35979806/ccs	chr14	+	4531	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_41	183.663945762989	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
m54284U_201016_223608/36047565/ccs	chr7	-	1696	1	FSM	ENSMUSG00000082016.4	ENSMUST00000117129.2	765	1	-27	-904	-27	904	mono-exon	FALSE	NA	NA	NA	NA	NA	562	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAATCTGAAAGAAAG	8930	False	NA	NA	False	AATAAA	-36	NA	27169987	27168291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27168300_27170000
m54284U_201016_223608/36112673/ccs	chr7	+	2575	8	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	583.012094249181	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515292	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16527571_16527806_16529682_16529878_16529948_16530084_16531426
m54284U_201016_223608/36176219/ccs	chr6	+	190	1	Intergenic	novelGene_3600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCCATAAGGCAGTAG	NA	False	NA	NA	False	NA	NA	NA	149454253	149454443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_149454300_149454400
m54284U_201016_223608/36177532/ccs	chr2	-	2535	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	0	-1332	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_5	32.7078821624934	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACAAGGATTCCTCCTAG	NA	False	NA	NA	False	AATAAA	-15	NA	130471947	130433253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
m54284U_201016_223608/36242404/ccs	chr19	-	191	1	Intergenic	novelGene_9121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAGGAGTGGTGTGACAC	NA	False	NA	NA	False	NA	NA	NA	6316239	6316048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_6316000_6316200
m54284U_201016_223608/36242584/ccs	chr3	-	2019	12	NIC	ENSMUSG00000033439.13	novel	3402	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	44.0480579022353	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCTGAGTGTGAGGCTT	NA	False	NA	NA	False	AATAAA	-23	NA	116388536	116374741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116384053_116384206_116385841_116385909_116386112_116386160_116388287
m54284U_201016_223608/36439935/ccs	chr5	+	1663	3	NNC	ENSMUSG00000049686.15	novel	1482	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGGACACCTCTTCCTC	4874	False	NA	-4	True	NA	NA	NA	123153136	123168219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_123153630_123165997_123166086_123167137
m54284U_201016_223608/36506077/ccs	chr8	-	1854	9	NIC	ENSMUSG00000031774.9	novel	828	9	NA	NA	0	713	intron_retention	FALSE	canonical	0	0	junction_3	229.797975132506	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3861	False	NA	-8	True	AATAAA	-19	NA	95328354	95301571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95323678_95323737_95328124
m54284U_201016_223608/36506244/ccs	chr4	+	3004	18	NNC	ENSMUSG00000028894.19	novel	3809	24	NA	NA	9707	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	39.8917219604376	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGGTTCTCTCTTTTTTT	NA	False	NA	22	True	AATATA	-30	NA	124645377	124695304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_124645486_124671133_124671231_124674167_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
m54284U_201016_223608/36569456/ccs	chr10	+	1402	3	NIC	ENSMUSG00000074781.6	novel	3867	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1883	junction_2	187	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCCTTTGTACAGTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	95351006	95378868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_95351100_95377066_95377641_95378133
m54284U_201016_223608/36700864/ccs	chr5	-	180	1	Intergenic	novelGene_2865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGGTCTACAGAGTG	NA	False	NA	NA	False	NA	NA	NA	122286082	122285902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_122285900_122286100
m54284U_201016_223608/36700947/ccs	chr9	-	658	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	3061	junction_1	89128.5	4065	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275501	78274333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_78274574_78275002_78275186_78275266
m54284U_201016_223608/3670876/ccs	chr6	-	2523	16	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	328	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	63.7024332345319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146478950	146451129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146477722_146477959_146478798
m54284U_201016_223608/3672861/ccs	chr7	+	2461	11	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	44.445584707595	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1308	False	NA	21	True	AATAAA	-15	NA	5083233	5101177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
m54284U_201016_223608/36832927/ccs	chr14	-	4190	1	Genic_Genomic	ENSMUSG00000014496.9	novel	NA	NA	NA	NA	-28	-49389	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAAATTACTTAGACCA	5252	False	NA	NA	False	NA	NA	NA	31552636	31548446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr14_-_31548400_31552600
m54284U_201016_223608/36833637/ccs	chr16	+	289	1	Intergenic	novelGene_8167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTTAAAATATCTCATA	6966	False	NA	NA	False	AATAAA	-19	NA	23153566	23153855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_23153600_23153900
m54284U_201016_223608/36833678/ccs	chr14	+	4909	22	NNC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_20	460.456049197565	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801351	19861855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19860785_19860838_19861021_19861135_19861253
m54284U_201016_223608/36896993/ccs	chr9	+	1988	9	NIC	ENSMUSG00000002820.7	novel	2123	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_7	37.8068694154911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8647	False	NA	21	True	GATAAA	-13	NA	21176601	21185041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
m54284U_201016_223608/36897243/ccs	chr2	+	2377	9	NIC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	620	junction_5	88.8225055940216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	False	NA	28	True	AATAAA	-36	NA	83474880	83494966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
m54284U_201016_223608/36898957/ccs	chr11	-	4529	15	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	0	-663	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	116.000901650261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTGGAGCCCAGCACTC	NA	False	NA	NA	False	AATAAA	-32	NA	12414960	12187773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
m54284U_201016_223608/36899378/ccs	chr5	-	4312	11	NIC	ENSMUSG00000032850.17	novel	4431	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	5.24976189936267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTATCTGTGAGTCAC	NA	False	NA	NA	False	AATAAA	-17	NA	118383059	118328806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_118331732_118339212_118339315_118339430_118339497_118340838_118340989_118366848_118367003_118370466_118370568_118372205_118372283_118375191_118375665_118380522_118380582_118380914_118381097_118383036
m54284U_201016_223608/37094291/ccs	chr9	+	1862	16	NNC	ENSMUSG00000032497.20	novel	1839	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	82.1629816617895	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGGATTTTGTTTGT	NA	False	NA	46	True	AATGAA	-18	NA	110947202	111053290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111023497_111023543_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
m54284U_201016_223608/37094573/ccs	chr2	+	3584	19	NIC	ENSMUSG00000070544.7	novel	3856	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	104.119530075821	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCGTCTGCCTGTTTGT	NA	False	NA	23	True	AATAAA	-21	NA	160487899	160564684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_160488183_160488527_160488553_160512019_160512123_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
m54284U_201016_223608/37158999/ccs	chr8	+	175	1	Intergenic	novelGene_4506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATGCATAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	112032305	112032480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112032300_112032500
m54284U_201016_223608/37160691/ccs	chr10	-	185	1	Intergenic	novelGene_5317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAGAATAATGAGTAA	NA	False	NA	NA	False	NA	NA	NA	60058421	60058236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_60058200_60058400
m54284U_201016_223608/37160889/ccs	chr16	+	4223	25	NIC	ENSMUSG00000022702.17	novel	4218	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_15	33.301547344764	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGCCTTCCCTGCCTT	NA	False	NA	7	True	AATAAA	-23	NA	18696019	18789059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_18696270_18713523_18713587_18715203_18715524_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18765095_18765298_18766163_18766269_18767885_18768035_18769924_18770087_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
m54284U_201016_223608/37227022/ccs	chr5	-	3135	29	NIC	ENSMUSG00000040537.18	novel	9161	30	NA	NA	0	340	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	5.47955383257448	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTTTAGCAGGTTTTC	6061	False	NA	-3	True	AATAAA	-15	NA	8418160	8128345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8161894_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200_8417362_8417875
m54284U_201016_223608/37290054/ccs	chrX	-	1126	9	NIC	ENSMUSG00000079845.9	novel	1162	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_7	103.290548938419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	72126084	72117950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72118324_72118440_72118537_72120338_72120438_72121630_72121731_72122581_72122700_72124325_72124395_72125079_72125208_72125626_72125674_72125988
m54284U_201016_223608/37290087/ccs	chr12	+	3728	26	NIC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	0	204	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	141.720705614952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4536	False	NA	15	True	AATAAA	-16	NA	11316105	11368248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_11316290_11321729_11321873_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
m54284U_201016_223608/3735614/ccs	chr18	-	189	1	Intergenic	novelGene_8968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAATAGAGTGGTAATGA	NA	False	NA	NA	False	NA	NA	NA	57272572	57272383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_57272400_57272600
m54284U_201016_223608/37356743/ccs	chr7	-	195	1	Intergenic	novelGene_4139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGAGAGTGATTAGAAC	NA	False	NA	NA	False	NA	NA	NA	136475482	136475287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_136475300_136475500
m54284U_201016_223608/37488753/ccs	chr5	+	3234	10	NIC	ENSMUSG00000029466.12	novel	2751	11	NA	NA	0	-459	intron_retention	FALSE	canonical	3	226	junction_7	30.3498123735734	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTGAGACTCTTCCTT	NA	False	NA	29	True	AATAAA	-25	NA	122560543	122582516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122579504_122581866
m54284U_201016_223608/37489265/ccs	chr15	-	175	1	Intergenic	novelGene_7915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAAAAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	95665304	95665129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_95665100_95665300
m54284U_201016_223608/37489406/ccs	chr1	-	190	1	Intergenic	novelGene_506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAGGAAGAATGCAAAC	NA	False	NA	NA	False	NA	NA	NA	179685108	179684918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_179684900_179685100
m54284U_201016_223608/37553227/ccs	chr7	-	1365	8	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	212	combination_of_known_junctions	FALSE	canonical	3	40	junction_3	409.120460280842	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569717	46539121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
m54284U_201016_223608/37617980/ccs	chr11	+	4548	5	NIC	ENSMUSG00000000282.13	novel	4590	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	37.5923861972075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCAGCATCTGGGTCAT	NA	False	NA	41	True	AATAAA	-32	NA	74721745	74736551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74722228_74727188_74727775_74728437_74728550_74732986_74733180_74733376
m54284U_201016_223608/37619544/ccs	chr11	+	2251	11	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_1	26.5083005867973	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATAAGAATCTGGGAGT	7673	False	NA	28	True	AATAAA	-35	NA	58197894	58205453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
m54284U_201016_223608/37620267/ccs	chr16	-	3064	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	55.8162014750864	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201016_223608/37683444/ccs	chr5	-	3469	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_17	495.072834147776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559841	149540309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559623
m54284U_201016_223608/37686101/ccs	chr6	-	3039	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	8132	junction_6	326.707652190762	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1567	False	NA	-9	True	AATAAA	-17	NA	7693254	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
m54284U_201016_223608/37749380/ccs	chr3	+	997	6	NIC	ENSMUSG00000005687.15	novel	2717	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_4	1540.95848094619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5023	False	NA	48	True	AATAAA	-16	NA	103079064	103086143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103084654_103084736_103085670
m54284U_201016_223608/37750039/ccs	chr7	+	3436	12	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-541	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_10	21.4830319358564	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101916471	102086525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
m54284U_201016_223608/37815068/ccs	chr15	-	186	1	Intergenic	novelGene_7879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGCTAGATCAAGACC	NA	False	NA	NA	False	NA	NA	NA	84161040	84160854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_84160900_84161000
m54284U_201016_223608/37817081/ccs	chr16	-	3474	18	NIC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_15	37.195732165794	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	57051736	56989224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019086_57019134_57019221_57019347_57028566_57028691_57032733_57032854_57034526_57034633_57038671_57038784_57051676
m54284U_201016_223608/37880659/ccs	chr1	+	185	1	Intergenic	novelGene_245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	747	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCCTTAGCTGCTGCC	NA	False	NA	NA	False	NA	NA	NA	91231406	91231591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_91231400_91231600
m54284U_201016_223608/37881804/ccs	chr14	+	171	1	Intergenic	novelGene_7577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCTCAATTATGAAGAAGT	6429	False	NA	NA	False	NA	NA	NA	99345586	99345757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_99345600_99345800
m54284U_201016_223608/37882039/ccs	chr14	+	4450	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	201.105679618951	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
m54284U_201016_223608/37945651/ccs	chr13	-	3991	10	NIC	ENSMUSG00000034928.17	novel	3797	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	257	junction_7	154.091202751592	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54841663	54827222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54832302_54841541
m54284U_201016_223608/3802404/ccs	chr1	-	2439	9	NIC	ENSMUSG00000026399.13	novel	2533	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	21.5982493503525	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTGTCTCCTGTAATA	NA	False	NA	NA	False	TTTAAA	-45	NA	130390468	130366763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_130368117_130375355_130375377_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
m54284U_201016_223608/38208694/ccs	chr9	-	4361	1	ISM	ENSMUSG00000059495.15	ENSMUST00000165665.9	10752	41	137783	1	58457	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGACTTTTTCTTTG	NA	False	NA	-2	True	ATTAAA	-18	NA	42879499	42875138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_42875100_42879500
m54284U_201016_223608/38209479/ccs	chr11	+	1824	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	35.3321898042513	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51153976	51172593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_51154097_51157997_51158159_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
m54284U_201016_223608/38339933/ccs	chr8	+	1904	1	Antisense	novelGene_ENSMUSG00000031959.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTAATGAGATCTGATGCC	NA	False	NA	NA	False	NA	NA	NA	112201267	112203171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_+_112201300_112203200
m54284U_201016_223608/38471305/ccs	chr2	+	3600	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	269.578043114865	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201016_223608/38471839/ccs	chr5	+	2161	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	405	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_7	1203.25670504047	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	False	NA	38	True	AATAAA	-30	NA	129864466	129875212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869104_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
m54284U_201016_223608/38536961/ccs	chr11	+	991	5	NIC	ENSMUSG00000019437.18	novel	457	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_1	80.151419201409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCTGAAGTCCTGTTC	NA	False	NA	NA	False	AATGAA	-1	NA	78068955	78071306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78069063_78069863_78070048_78070195_78070279_78070365_78070449_78070772
m54284U_201016_223608/38537990/ccs	chr9	+	197	1	Intergenic	novelGene_4690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCCTGACTAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	31090687	31090884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_31090700_31090900
m54284U_201016_223608/38601609/ccs	chr6	+	2303	18	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	8.17117899020487	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	5827	False	NA	6	True	AATAAA	-21	NA	113448458	113460101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113451513_113451559_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
m54284U_201016_223608/38602615/ccs	chr12	+	3200	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7390	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	44.458470009162	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066191	81233188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_81066280_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197425_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
m54284U_201016_223608/38667640/ccs	chr14	+	3663	13	NIC	ENSMUSG00000021895.11	novel	3198	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	15.3622914957372	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCCTCCTGTGTACAG	NA	False	NA	NA	False	AATAAA	-15	NA	26836855	27125868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_26836881_26874918_26875013_26930845_26930913_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
m54284U_201016_223608/38668807/ccs	chr17	+	3625	26	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	107.302294476866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGATTGTTTCAGG	6670	False	NA	20	True	AATAAA	-21	NA	35117444	35133028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
m54284U_201016_223608/38668962/ccs	chr13	+	208	1	Intergenic	novelGene_7137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAGGTGAAAACACT	NA	False	NA	NA	False	TTTAAA	-15	NA	62361630	62361838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62361600_62361800
m54284U_201016_223608/3867190/ccs	chr19	-	1544	7	NNC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_5	41.5317816724601	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9871	False	NA	-2	True	NA	NA	NA	61215121	61212839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_61213472_61213570_61213653_61213761_61214091_61214229_61214260_61214365_61214494_61214638_61214823_61214962
m54284U_201016_223608/3868888/ccs	chr11	+	913	4	NNC	ENSMUSG00000017716.16	novel	3334	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	863.560973849302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTCTTGGAGAAATGG	NA	False	NA	40	True	AATAAA	-29	NA	117740144	117746569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_117740288_117740579_117740713_117743488_117743607_117746050
m54284U_201016_223608/38798674/ccs	chr3	-	181	1	Intergenic	novelGene_1485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCCATTTCTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	88466694	88466513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88466500_88466700
m54284U_201016_223608/38798696/ccs	chr11	+	1657	15	NIC	ENSMUSG00000017428.17	novel	2848	14	NA	NA	0	57	combination_of_known_junctions	FALSE	canonical	2	12	junction_3	359.20998917977	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAAGCTGTGCTCTCTGC	NA	False	NA	13	True	NA	NA	NA	80319469	80362792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_80319582_80322530_80322633_80329076_80329202_80329346_80329457_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
m54284U_201016_223608/38929152/ccs	chrX	+	2189	5	NNC	ENSMUSG00000033460.15	novel	2228	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	54.8925085963467	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618711	133622659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620823
m54284U_201016_223608/38994229/ccs	chr11	-	3681	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-508	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5316	False	NA	-4	True	ATTAAA	-19	NA	60101218	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60101161
m54284U_201016_223608/38995940/ccs	chr5	+	2085	16	NIC	ENSMUSG00000037108.14	novel	2222	17	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	25.4046364972136	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGCTTTGTGTGTGTGT	7130	False	NA	32	True	AATAAA	-25	NA	137786112	137820883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
m54284U_201016_223608/39061084/ccs	chr2	+	1198	4	NIC	ENSMUSG00000023330.13	novel	1342	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	74.5534856477028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCGCCCTTACCTTTCG	7279	False	NA	25	True	ATTAAA	-23	NA	125994060	126007196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_125994135_125996465_125996781_126001689_126001949_126006646
m54284U_201016_223608/39190969/ccs	chr5	-	1010	5	ISM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	2238	0	-225	0	3prime_fragment	FALSE	canonical	1	50	junction_4	239.958720408324	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGGCCAGCCATCATTAAT	NA	False	NA	-7	True	NA	NA	NA	109704564	109702574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285
m54284U_201016_223608/39191571/ccs	chr1	-	6584	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	65.2179998160017	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7132	False	NA	-1	True	AATAAA	-22	NA	36978697	36831274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_36832287_36833124_36833277_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835361_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
m54284U_201016_223608/39192101/ccs	chr4	-	4290	22	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	0	-2205	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	128.779743058535	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	4	True	NA	1	True	AATAAA	-22	NA	9669086	9451283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9610842_9610939_9635900_9635970_9639197_9639348_9668780
m54284U_201016_223608/39193114/ccs	chr4	+	177	1	Intergenic	novelGene_1859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGGAAGCTGGCTTGC	9223	False	NA	NA	False	NA	NA	NA	48628153	48628330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_48628200_48628300
m54284U_201016_223608/39323104/ccs	chr7	+	2631	13	NNC	ENSMUSG00000015165.17	novel	1850	13	NA	NA	459	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	1657.64973347474	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510823	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_28511592_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
m54284U_201016_223608/3934413/ccs	chr9	+	2216	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	240	junction_1	5243.70720483133	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1872	False	NA	20	True	AATAAA	-20	NA	59563858	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_59563933_59572490_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201016_223608/3934452/ccs	chr4	-	169	1	Intergenic	novelGene_2368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGGGGCATGTTCTC	NA	False	NA	NA	False	NA	NA	NA	148226808	148226639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_148226600_148226800
m54284U_201016_223608/39388165/ccs	chr11	-	3122	7	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	297.908636255406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678472	54608281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54632078_54632161_54647231_54647386_54678385
m54284U_201016_223608/39388664/ccs	chr6	+	3277	9	NIC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	0	568	intron_retention	FALSE	canonical	3	2268	junction_5	115.163742123986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACATTTGCTTTTGCTGT	537	False	NA	5	True	AATAAA	-11	NA	88061463	88080937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88079203_88080346
m54284U_201016_223608/39521026/ccs	chr5	-	213	1	Intergenic	novelGene_2906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACTGGAGAGAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	124638566	124638353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124638400_124638600
m54284U_201016_223608/395953/ccs	chr8	+	2518	11	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	161	junction_2	301.20167662216	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201016_223608/39716617/ccs	chr11	+	1769	8	NNC	ENSMUSG00000037992.17	novel	2380	9	NA	NA	4462	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	85.0267664938998	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACTGAAGGAATTTGT	NA	False	NA	6	True	NA	NA	NA	98855699	98864988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_98855733_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
m54284U_201016_223608/39716786/ccs	chr1	-	2976	18	NIC	ENSMUSG00000026037.15	novel	3561	18	NA	NA	0	-425	combination_of_known_junctions	FALSE	canonical	3	142	junction_17	104.64575272802	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGGTCTGCACTT	NA	False	NA	0	True	AATAAA	-18	NA	58544114	58502354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541044_58543930
m54284U_201016_223608/39717644/ccs	chr14	-	2132	7	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	0	1103	intron_retention	FALSE	canonical	3	280	junction_4	44.7167008323885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919277	55916560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55916867_55916970_55917388_55917471_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
m54284U_201016_223608/39782384/ccs	chr11	-	176	1	Intergenic	novelGene_6250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGATTCCCTGGAT	8395	False	NA	-3	True	NA	NA	NA	96139248	96139072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_96139100_96139200
m54284U_201016_223608/39782483/ccs	chr6	+	2258	17	NNC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	0	4560	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_16	168.346728788385	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTACGTTAGTTCTGT	NA	False	NA	NA	False	NA	NA	NA	31375770	31474188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31473982
m54284U_201016_223608/39848166/ccs	chr3	-	4659	12	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_8	60.6462442542715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865620	65853571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65860157_65862698_65864273_65864384_65864921_65864997_65865228
m54284U_201016_223608/39913683/ccs	chr12	+	2576	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_10	357.8025762816	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713247	98753107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745399_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
m54284U_201016_223608/39978782/ccs	chr16	+	5359	20	NIC	ENSMUSG00000022801.14	novel	5536	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	16.4029927679418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTTTTCTTGCCAGAG	NA	False	NA	16	True	AATAAA	-25	NA	32734496	32836017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
m54284U_201016_223608/39979772/ccs	chr1	+	174	1	Intergenic	novelGene_411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGTTTATTTGTTT	2964	False	NA	NA	False	NA	NA	NA	156503369	156503543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156503400_156503500
m54284U_201016_223608/3998705/ccs	chr7	-	4074	1	Intergenic	novelGene_4136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTCTGGGGGTTAAG	NA	False	NA	NA	False	NA	NA	NA	133620558	133616484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_133616500_133620600
m54284U_201016_223608/3999067/ccs	chr4	+	549	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	-844	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	92.8906166771793	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGCAGTGAATGTGACA	NA	False	NA	13	True	NA	NA	NA	147576873	147597033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_147577009_147592042_147592098_147595209_147595337_147596801
m54284U_201016_223608/3999553/ccs	chr3	+	6648	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_36	20.6390460440072	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6168	False	NA	12	True	AAGAAA	-13	NA	87524881	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
m54284U_201016_223608/3999855/ccs	chr5	-	3881	20	NNC	ENSMUSG00000106864.4	novel	4200	21	NA	NA	0	235	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_19	181.770090089017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGAGTGGGTGTTTGG	NA	False	NA	-1	True	AGTAAA	-23	NA	31337255	31314552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31336590
m54284U_201016_223608/40043088/ccs	chr15	-	4901	36	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	0	-230	combination_of_known_splicesites	FALSE	canonical	2	4	junction_31	72.5089157079518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1656	False	NA	-9	True	ATTAAA	-19	NA	73295061	73077180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73236889_73237045_73263607_73263730_73264192_73264297_73266496_73266594_73294857
m54284U_201016_223608/40044040/ccs	chr1	+	2999	8	NNC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	271	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	349.512488463341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	1133	False	NA	38	True	AATAAA	-23	NA	74545489	74570001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_74545621_74556228_74556413_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
m54284U_201016_223608/40239817/ccs	chr4	-	202	1	Intergenic	novelGene_2291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTATCAGGTATGTGG	NA	False	NA	NA	False	NA	NA	NA	139267862	139267660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_139267700_139267900
m54284U_201016_223608/40239831/ccs	chr19	+	2869	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	0	-2771	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	409.731164911824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919358	38956724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
m54284U_201016_223608/40370278/ccs	chr14	+	1920	1	Antisense	novelGene_ENSMUSG00000032849.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTTAGCTTTCTTTGGT	5366	False	NA	NA	False	NA	NA	NA	118943324	118945244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_118943300_118945200
m54284U_201016_223608/40372914/ccs	chr4	-	5233	19	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	34.6963903911176	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776402	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
m54284U_201016_223608/40502224/ccs	chr11	-	5462	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	63.2860691085319	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2066	False	NA	-32	True	AATAAA	-16	NA	104441446	104393570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104417011_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441303
m54284U_201016_223608/40503360/ccs	chr1	-	1730	11	NNC	ENSMUSG00000046337.18	novel	1659	10	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_8	39.9335698379196	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACGCC	NA	False	NA	NA	False	AATACA	-27	NA	36722212	36639056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
m54284U_201016_223608/40567516/ccs	chrX	-	1080	8	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	0	303	combination_of_known_junctions	FALSE	canonical	3	293	junction_4	76.0110088696878	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72152123_72152218_72152324_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161207
m54284U_201016_223608/4063869/ccs	chr8	-	2261	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	895.061929222139	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTACTTGGCTTCACTGG	NA	False	NA	-12	True	AATAAA	-19	NA	26337722	26306903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
m54284U_201016_223608/40699850/ccs	chr3	+	3548	13	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_9	122.701082128706	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-10	True	NA	13	True	AATAAA	-14	NA	88593120	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617164_88617250_88618067
m54284U_201016_223608/40700398/ccs	chr15	-	1856	10	NNC	ENSMUSG00000033228.9	novel	796	8	NA	NA	-127	-1807	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	90.598013223249	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTATTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	96358851	96320487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_96321226_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
m54284U_201016_223608/40700545/ccs	chr6	-	2403	4	NNC	ENSMUSG00000085794.6	novel	1435	6	NA	NA	5441	0	intron_retention	FALSE	canonical	3	98	junction_3	15.6914697279198	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTAGGCGGACTTTGC	2725	False	NA	-11	True	NA	NA	NA	83675084	83669787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_83670449_83671329_83671456_83672566_83674051_83674952
m54284U_201016_223608/40765647/ccs	chr11	+	1807	9	NIC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	409.499065169873	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823998	4844200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
m54284U_201016_223608/40766302/ccs	chr6	+	1698	11	NIC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	7	junction_10	35.1630487870435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGATGCCTTTCAGCA	NA	False	NA	19	True	AATAAA	-21	NA	88879280	88889220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88888664
m54284U_201016_223608/40894923/ccs	chrX	-	4129	21	NIC	ENSMUSG00000036916.14	novel	4045	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	26.1914108058348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGCATCATCTAATAC	NA	False	NA	43	True	AATAAA	-21	NA	47683329	47630502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47682390_47682476_47683240
m54284U_201016_223608/40897164/ccs	chr7	+	2074	7	NIC	ENSMUSG00000058454.16	novel	2556	9	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	155.689238192268	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_143384003_143390374_143390467_143391498_143391722_143395076_143395109_143396850_143397056_143399177_143399310_143400789
m54284U_201016_223608/40960942/ccs	chr9	+	4676	27	NIC	ENSMUSG00000006676.17	novel	4512	27	NA	NA	101	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_18	68.2213157964143	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGGCTCCCTCCCC	NA	False	NA	31	True	AATAAA	-35	NA	108367901	108379536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375330_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
m54284U_201016_223608/41025916/ccs	chr4	-	3748	1	Antisense	novelGene_ENSMUSG00000041025.16_AS_novelGene_ENSMUSG00000094439.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATCTCTCTCTCTCTCTG	8451	False	NA	NA	False	NA	NA	NA	139344111	139340363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_139340400_139344100
m54284U_201016_223608/41026984/ccs	chr9	+	3600	23	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	56.9185477184737	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6630	False	NA	19	True	AATAAA	-19	NA	21232043	21266324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
m54284U_201016_223608/41091958/ccs	chr16	+	2588	17	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_14	970.705765715724	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327031_20327140_20327458_20327570_20327710
m54284U_201016_223608/41092493/ccs	chr5	-	2761	13	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	59	0	intron_retention	FALSE	canonical	3	1197	junction_12	119.967356671166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782406	24770342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
m54284U_201016_223608/41093027/ccs	chr13	-	2649	31	NIC	ENSMUSG00000021585.11	novel	5141	32	NA	NA	140	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_30	28.2737609022138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCTGTATTGAGT	NA	False	NA	-6	True	AATGAA	-13	NA	74956789	74842781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74956554
m54284U_201016_223608/41158189/ccs	chr1	+	1690	14	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	88.7478310427522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGACTCCTACTTGCGC	NA	False	NA	18	True	AATAAA	-22	NA	75412625	75419823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75412656_75412758_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
m54284U_201016_223608/41289492/ccs	chr2	-	173	1	Intergenic	novelGene_1077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAGAAACAGG	8931	False	NA	NA	False	NA	NA	NA	131998536	131998363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_131998400_131998500
m54284U_201016_223608/4129292/ccs	chr8	-	1384	10	NIC	ENSMUSG00000038000.11	novel	3154	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	60.9681155286196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427734	106424788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106427035_106427334_106427472_106427551
m54284U_201016_223608/4130172/ccs	chr8	+	1115	5	NNC	ENSMUSG00000031851.15	novel	1155	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	25.0499500997507	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGAGTCCTTGTGTGGG	NA	False	NA	23	True	AATAAA	-31	NA	126460976	126474974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_126461089_126462806_126462965_126464061_126464159_126471974_126472185_126474436
m54284U_201016_223608/4130377/ccs	chr8	-	172	1	Intergenic	novelGene_4424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAGTTGGTTATTTCTGC	NA	False	NA	NA	False	NA	NA	NA	96597183	96597011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_96597000_96597200
m54284U_201016_223608/41354867/ccs	chr6	+	3276	13	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	0	-52	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	180.170347634306	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGTTTCCAATTCTTA	-14	True	NA	17	True	ATTAAA	-29	NA	30048000	30153127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
m54284U_201016_223608/41355173/ccs	chr15	-	181	1	Intergenic	novelGene_7671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	34295553	34295372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_34295400_34295600
m54284U_201016_223608/41419977/ccs	chr4	+	4104	28	NIC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_19	18.4710502737861	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1429	False	NA	12	True	AATAAA	-17	NA	140714210	140734641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140734160_140734251
m54284U_201016_223608/41550265/ccs	chr1	-	4168	13	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	1975	junction_5	145.400787098588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669944	181642899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
m54284U_201016_223608/41616282/ccs	chr9	+	3646	8	NIC	ENSMUSG00000020257.14	novel	3747	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	76.5447714792874	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCATTGAGTTTCTGTA	NA	False	NA	54	True	NA	NA	NA	106048127	106068338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_106048579_106053811_106053910_106057764_106057832_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
m54284U_201016_223608/41681395/ccs	chr12	+	3356	9	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	107	junction_2	35.806554916663	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807618	117842441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117839460_117840640_117840778_117841201
m54284U_201016_223608/41747224/ccs	chr14	+	1682	5	NIC	ENSMUSG00000022102.14	novel	404	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	2.38484800354236	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTGGCCTGTAATGC	NA	False	NA	NA	False	ATTAAA	-16	NA	71010711	71015935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_71010805_71012905_71013188_71013423_71013512_71014255_71014438_71014898
m54284U_201016_223608/41812640/ccs	chrX	+	3292	4	NIC	ENSMUSG00000073176.5	novel	3738	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	18.8030730348939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTTCTGATTCTTTTA	NA	False	NA	6	True	AATAAA	-16	NA	55391759	55411034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_55391800_55398822_55399028_55407826_55407941_55408101
m54284U_201016_223608/41812781/ccs	chr2	-	4781	26	NIC	ENSMUSG00000034032.16	novel	4813	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_25	88.1886704741601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTGGACTGTTTTGTC	481	False	NA	-5	True	AATAAA	-17	NA	119618001	119594443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617701_119617779_119617915
m54284U_201016_223608/41878487/ccs	chr1	+	3987	20	NIC	ENSMUSG00000025995.17	novel	2953	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	553	junction_3	48.4054322630857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAAGCCTTGTGTTTAT	NA	False	NA	8	True	TATAAA	-24	NA	45834666	45862779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
m54284U_201016_223608/42010962/ccs	chr8	-	4312	27	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_16	201.421663160973	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
m54284U_201016_223608/42075370/ccs	chr8	+	950	3	NNC	ENSMUSG00000041203.10	novel	902	3	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	617	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753519	85756915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_85753864_85756051_85756246_85756503
m54284U_201016_223608/42336327/ccs	chr15	-	4429	1	Intergenic	novelGene_7640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGACCTGCTTTCTTTC	3931	False	NA	NA	False	NA	NA	NA	12133999	12129570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_12129600_12134000
m54284U_201016_223608/42404527/ccs	chr17	-	5607	41	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_40	61.3754378803117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTTGACTTTGTCTT	NA	False	NA	8	True	NA	NA	NA	24851601	24815443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
m54284U_201016_223608/42467787/ccs	chr2	-	153	1	Intergenic	novelGene_933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAATAATAAATGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	91563768	91563615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91563600_91563800
m54284U_201016_223608/42534653/ccs	chr1	+	2313	7	NIC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	409	junction_5	19.2440466984814	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954339	171962850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171954416_171956197_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
m54284U_201016_223608/42599466/ccs	chr13	+	1806	7	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	379	junction_1	14.3488288333539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54937275	54944588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_54937495_54940421_54940473_54940552_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
m54284U_201016_223608/42600383/ccs	chr7	-	3891	6	NIC	ENSMUSG00000030788.17	novel	4032	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_4	41.252393869932	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTAGGTGTTGGGAGTTT	NA	False	NA	0	True	ATTAAA	-22	NA	110443609	110412737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436369_110436478_110443545
m54284U_201016_223608/42600407/ccs	chr15	-	6620	36	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	-310	0	intron_retention	FALSE	canonical	2	5	junction_20	89.0563041346453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	8833	False	NA	-5	True	AATACA	-19	NA	89065301	89039751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89064867
m54284U_201016_223608/4260168/ccs	chr14	-	173	1	Intergenic	novelGene_7371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATAAGCCGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	26730593	26730420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26730400_26730600
m54284U_201016_223608/4261339/ccs	chr12	+	2578	6	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	91.7243697171041	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258133	8335759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_8258205_8270599_8270756_8288442_8288616_8318363_8318599_8325807_8325891_8333899
m54284U_201016_223608/42665340/ccs	chr7	-	2258	1	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	0	-6629	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGCCAAGGCTAGCAA	7925	False	NA	NA	False	NA	NA	NA	126641643	126639385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126639400_126641600
m54284U_201016_223608/42665824/ccs	chr12	+	3006	14	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	423.960713263072	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713247	98754012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
m54284U_201016_223608/42666059/ccs	chr2	-	3418	21	NNC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_14	75.2298311841785	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168399	165131074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150937_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
m54284U_201016_223608/42730256/ccs	chr19	-	2565	10	NIC	ENSMUSG00000024797.15	novel	2675	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	45.903548909307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTTGCCTGCAGGGGC	1015	False	NA	-3	True	AATAAA	-18	NA	6127233	6118019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6118472_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
m54284U_201016_223608/42862087/ccs	chr16	-	166	1	Intergenic	novelGene_8237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTTTAAAAATCATTT	NA	False	NA	NA	False	NA	NA	NA	34963939	34963773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_34963800_34963900
m54284U_201016_223608/42862355/ccs	chr19	-	3138	17	NIC	ENSMUSG00000024660.10	novel	3236	18	NA	NA	0	-60	intron_retention	FALSE	canonical	3	363	junction_13	48.9015273278862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876853	9849765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
m54284U_201016_223608/42992141/ccs	chr15	-	2429	10	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	332.434380418077	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432145	98416701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426907_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
m54284U_201016_223608/42994329/ccs	chr10	+	2496	14	NIC	ENSMUSG00000020156.17	novel	2640	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_1	122.224887305831	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCATAGTCATTGCACA	8464	False	NA	19	True	TATAAA	-17	NA	80062513	80079737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80062641_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
m54284U_201016_223608/43124645/ccs	chr9	+	5558	33	NIC	ENSMUSG00000033577.19	novel	7927	35	NA	NA	0	802	combination_of_known_junctions	TRUE	canonical	3	6	junction_28	17.6442437054553	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGTCTTTATTTGT	4854	False	NA	30	True	AATAAA	-33	NA	80072312	80216686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80203924_80203964_80206427_80206532_80207816_80207949_80214241_80214461_80214953
m54284U_201016_223608/43124725/ccs	chr8	+	1966	7	NIC	ENSMUSG00000034656.19	novel	2941	16	NA	NA	-9218	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	6.02771377334171	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTTCTGAACTAGAGT	NA	False	NA	8	True	NA	NA	NA	85356401	85366875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85356555_85359835_85359946_85360041_85360181_85360278_85360393_85363140_85363328_85365240_85365495_85365866
m54284U_201016_223608/43125003/ccs	chr11	-	2747	7	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	64.1320252811859	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834965	105824527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
m54284U_201016_223608/43190414/ccs	chr7	-	3751	22	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	147	junction_21	1306.04265608024	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680779_110681991
m54284U_201016_223608/43256314/ccs	chr6	+	2049	10	NNC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	229.298931528256	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTCAGAGCATTCC	NA	False	NA	12	True	ATTAAA	-17	NA	82923882	83007164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_82924038_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
m54284U_201016_223608/4326081/ccs	chr3	-	1471	13	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	66	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	242.200444994545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857512	88830941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857422
m54284U_201016_223608/43320833/ccs	chr5	+	1968	17	NNC	ENSMUSG00000029227.16	novel	4673	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	197.99270030736	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696163	74756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717706_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
m54284U_201016_223608/43321988/ccs	chr6	+	183	1	ISM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	25667	1857	25604	-1857	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACACAGTAAAAAACAAAA	2580	False	NA	NA	False	NA	NA	NA	134931721	134931904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_134931700_134931900
m54284U_201016_223608/43387388/ccs	chr15	-	182	1	Intergenic	novelGene_7921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAGAGAGATAA	NA	False	NA	NA	False	NA	NA	NA	96390973	96390791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_96390800_96391000
m54284U_201016_223608/43583905/ccs	chr14	+	4358	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	179.099449342444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
m54284U_201016_223608/43779609/ccs	chr2	+	8519	30	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	98.1481565903952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6650	False	NA	24	True	AATAAA	-40	NA	32041093	32124549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
m54284U_201016_223608/43779952/ccs	chr17	+	4902	14	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1624	junction_8	114.104903462046	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88028487_88030758
m54284U_201016_223608/43845570/ccs	chr7	+	4236	31	NNC	ENSMUSG00000030835.7	novel	4257	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_30	63.0641736646093	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGTGTGGGGTGCATAC	8093	False	NA	29	True	AATAAA	-29	NA	45683121	45733636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733047
m54284U_201016_223608/4392177/ccs	chr7	+	1521	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30760	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	122.938437337555	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81889333	81956627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919987_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
m54284U_201016_223608/44107376/ccs	chr2	-	1557	14	NNC	ENSMUSG00000017754.14	novel	2226	15	NA	NA	244	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	100.554910078168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164698472	164681437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698385
m54284U_201016_223608/44303777/ccs	chr1	+	2718	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	116.815132358479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201016_223608/44370413/ccs	chr2	-	3305	12	NIC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1195	junction_9	117.178820752975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144112704	144092042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
m54284U_201016_223608/44370449/ccs	chr11	-	1137	5	NIC	ENSMUSG00000040699.14	novel	2950	5	NA	NA	0	273	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	113.415993140297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTCTCTTGTGTGGC	NA	False	NA	-14	True	TTTAAA	-15	NA	106050968	106048866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050241_106050876
m54284U_201016_223608/44500015/ccs	chr4	+	1245	6	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	136	junction_2	1239.30522471262	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCATTTTTGTTCCTA	8716	False	NA	28	True	AATACA	-36	NA	148675959	148679076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_148676244_148676500_148676622_148677744_148677899_148678224_148678455_148678539_148678663_148678743
m54284U_201016_223608/44500257/ccs	chr5	+	5934	24	NIC	ENSMUSG00000046808.18	novel	6052	23	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_23	25.1562978093101	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATTACTCCTGTAACT	NA	False	NA	24	True	AATAAA	-29	NA	72360671	72456118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_72360907_72384974_72385302_72387619_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404395_72404649_72412253_72412490_72418266_72418456_72421345_72421956_72423313_72423418_72424749_72424877_72426614_72426800_72434421_72434729_72436727_72436805_72437386_72437513_72439447_72439649_72445485_72445567_72446660_72446766_72452984_72453173_72454270_72454965_72455082
m54284U_201016_223608/44500646/ccs	chr19	+	2505	5	NIC	ENSMUSG00000048832.10	novel	2690	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	44.7017896733453	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTGTCCATGATGAGT	NA	False	NA	17	True	AATAAA	-20	NA	10666126	10691991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10666174_10683573_10683673_10687633_10687806_10688634_10688718_10689887
m54284U_201016_223608/44500993/ccs	chr8	-	865	4	ISM	ENSMUSG00000034845.7	ENSMUST00000048452.6	1987	6	4068	0	4068	0	3prime_fragment	FALSE	canonical	3	9	junction_3	3.77123616632825	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTTTGTATTTGTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	71960328	71950408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_71951050_71959480_71959563_71959663_71959722_71960244
m54284U_201016_223608/44566781/ccs	chr17	-	2485	14	NIC	ENSMUSG00000024137.10	novel	2552	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	26.3685755236784	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGTTGTGATTGGG	NA	False	NA	-4	True	AATAAA	-13	NA	24674289	24662755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664529_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
m54284U_201016_223608/4457299/ccs	chr14	-	1341	9	NNC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	0	-1127	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_8	1786.95934131138	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATTTTCATCTCTTA	NA	False	NA	-38	True	AATAAA	-18	NA	36857229	36843907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855753_36857151
m54284U_201016_223608/4458317/ccs	chr14	-	2667	8	NIC	ENSMUSG00000041028.17	novel	3188	9	NA	NA	0	333	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	1935.73440158235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTCTGTCTTTAGTCTC	NA	False	NA	-11	True	AGTAAA	-17	NA	36857229	36842447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36853494_36853607_36855127_36855228_36855589_36855761_36857151
m54284U_201016_223608/4458930/ccs	chr8	+	4386	18	NNC	ENSMUSG00000017478.16	novel	4789	8	NA	NA	231	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	73.4055898609729	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	1208	False	NA	15	True	AATAAA	-16	NA	123103650	123144099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_123104490_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
m54284U_201016_223608/44631890/ccs	chr18	+	3244	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_11	143.536853812416	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	12	True	NA	NA	False	AATAAA	-8	NA	7869196	7927067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921424_7921609_7921855_7921984_7926069
m54284U_201016_223608/44632614/ccs	chr6	+	2470	14	NIC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	309	junction_2	383.92254519637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201016_223608/44632825/ccs	chr7	-	1702	11	NNC	ENSMUSG00000031027.16	novel	2295	13	NA	NA	51257	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_10	9.45568612000208	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCAGTCCCTCACGTGT	NA	False	NA	-14	True	AATAAA	-26	NA	108986767	108878429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_108879064_108911477_108911628_108920003_108920090_108920667_108920781_108924887_108924964_108926798_108926887_108928739_108928829_108930675_108930815_108935247_108935353_108937526_108937641_108986659
m54284U_201016_223608/44698202/ccs	chr2	+	2050	8	NNC	ENSMUSG00000026856.15	novel	2251	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	114.803470046397	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCATACATTACTT	NA	False	NA	8	True	AATAAA	-15	NA	30282441	30290540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286467_30286543_30287030_30287160_30287479_30287570_30289153
m54284U_201016_223608/44762717/ccs	chr1	-	6396	42	NNC	ENSMUSG00000026219.15	novel	6442	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_25	267.718380895604	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
m54284U_201016_223608/44827418/ccs	chr6	+	4226	15	NIC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-1255	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	55.9380123394619	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCTTCCCTGAACAAT	7092	False	NA	6	True	AATAAA	-14	NA	136495843	136584062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_136495962_136536761_136538438_136540757_136540845_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
m54284U_201016_223608/44828141/ccs	chr17	-	1549	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	264.919479424433	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181535	15165270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_15165447_15166574_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
m54284U_201016_223608/44828916/ccs	chr5	-	147	1	Intergenic	novelGene_2679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	93138952	93138805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_93138800_93139000
m54284U_201016_223608/44959289/ccs	chr17	-	2254	8	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_3	678.209978922608	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514733	80507508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511583_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
m54284U_201016_223608/44960461/ccs	chr3	+	2814	5	NNC	ENSMUSG00000046722.15	novel	2805	5	NA	NA	-1488	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	170.332579091611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACGGTTTCAGAGTAATC	175	False	NA	21	True	AATAAA	-11	NA	95138109	95143720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_95138253_95139095_95139404_95139859_95139971_95140798_95140891_95141560
m54284U_201016_223608/45024358/ccs	chr1	-	178	1	Intergenic	novelGene_360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	138778009	138777831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_138777800_138778000
m54284U_201016_223608/45089884/ccs	chr8	+	1511	12	NIC	ENSMUSG00000031634.14	novel	1640	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	58.4742650182239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAGCTGTGATTTAAAAA	8866	False	NA	6	True	AATAAA	-19	NA	46428570	46449897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_46428626_46432245_46432333_46433351_46433505_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
m54284U_201016_223608/45154717/ccs	chr3	-	2338	5	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-741	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	103.228811385194	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102075030	102064032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102074975
m54284U_201016_223608/4523782/ccs	chr15	+	3548	17	ISM	ENSMUSG00000022364.15	ENSMUST00000110175.9	3468	18	5	0	0	0	intron_retention	FALSE	canonical	3	200	junction_2	25.2003689209107	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTCTGCATGTAATTG	NA	False	NA	2	True	AATAAA	-16	NA	57775634	57822798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732
m54284U_201016_223608/45351021/ccs	chr11	+	4600	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-380	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	71.8904699485369	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCAATGGTACAGTA	NA	False	NA	33	True	AATAAA	-29	NA	21188900	21271136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_21189372_21213198_21213288_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
m54284U_201016_223608/45351586/ccs	chr10	-	4379	5	NIC	ENSMUSG00000039879.10	novel	5098	4	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.4642691338338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTTTAGATTTTGT	NA	False	NA	-11	True	AATAAA	-22	NA	17823898	17774782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_17775030_17775831_17778126_17783781_17783937_17790739_17791781_17823256
m54284U_201016_223608/45351779/ccs	chr19	-	6074	4	NIC	ENSMUSG00000024782.8	novel	2809	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_3	6.37704215656966	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGGGCTGTCTCCATGTT	NA	False	NA	-1	True	AATAAA	-16	NA	29025361	28998232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_29003731_29004570_29004744_29015271_29015392_29025078
m54284U_201016_223608/45416762/ccs	chr10	+	4960	9	NIC	ENSMUSG00000038332.14	novel	3809	10	NA	NA	218	0	intron_retention	FALSE	canonical	3	40	junction_1	19.5320249846246	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTTATTAATTTCAT	210	False	NA	8	True	AATAAA	-15	NA	41686148	41784420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41781361_41782331_41782477_41783267
m54284U_201016_223608/45482088/ccs	chr6	-	1830	7	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	429	junction_6	64.9095524557056	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	2026	False	NA	2	True	AATAAA	-31	NA	83031423	83028246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83030052_83030309_83030505_83030593_83030799_83030901
m54284U_201016_223608/45482726/ccschrUn	chrUn_JH584304v1	-	2497	8	Intergenic	novelGene_9752	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	124	junction_5	302.837398278215	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59701	52188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
m54284U_201016_223608/45614287/ccs	chr6	-	4361	22	NIC	ENSMUSG00000030138.9	novel	4345	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	285	junction_21	61.0015426740733	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCTAGTGATTTATT	8347	False	NA	-1	True	ATTAAA	-16	NA	118396373	118360341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
m54284U_201016_223608/45680507/ccs	chr11	+	4297	22	NNC	ENSMUSG00000020536.13	novel	4303	22	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_15	80.74533747412	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCACACATGTGGACA	NA	False	NA	39	True	AATAAA	-24	NA	60590548	60605012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601118_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
m54284U_201016_223608/45746806/ccs	chr16	-	171	1	Intergenic	novelGene_8217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGTATTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	32367502	32367331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32367300_32367500
m54284U_201016_223608/45811020/ccs	chr17	+	3771	19	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_18	11.188066835078	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69463804	69596984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
m54284U_201016_223608/45812289/ccs	chr8	-	1754	19	NIC	ENSMUSG00000031878.19	novel	1808	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_16	180.03728180437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTGTTGTCTGGAA	3356	False	NA	NA	False	AATAAA	-19	NA	105261246	105237659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105256687_105256749_105257024_105257129_105261143
m54284U_201016_223608/45877392/ccs	chr8	-	2767	6	NNC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-233	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_4	40.6890648700606	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740877	27715803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_27716411_27716753_27716822_27717284_27718779_27719136_27719313_27739175_27739238_27740517
m54284U_201016_223608/45877684/ccs	chr8	-	176	1	Intergenic	novelGene_4188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACATGTGT	NA	False	NA	NA	False	NA	NA	NA	3792706	3792530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_3792500_3792700
m54284U_201016_223608/4588247/ccs	chr1	-	1813	10	NNC	ENSMUSG00000003051.14	novel	1901	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	195.894529445482	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTGAGCTCTCTGT	NA	False	NA	-10	True	AATAAA	-23	NA	135186176	135181316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_135181885_135181972_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135184965_135185352_135185521_135186086
m54284U_201016_223608/4588935/ccs	chr3	+	2889	1	FSM	ENSMUSG00000105176.2	ENSMUST00000197014.2	5342	1	-1023	3476	-1023	-3476	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAACACTAGGAATT	NA	False	NA	-20	True	NA	NA	NA	34123784	34126673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_34123800_34126700
m54284U_201016_223608/45941369/ccs	chr1	-	3616	16	NIC	ENSMUSG00000026409.15	novel	4505	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	6.66199836552233	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAAATTTTCAATTCA	3919	False	NA	NA	False	AATAAA	-26	NA	130643551	130616919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_130618886_130625642_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
m54284U_201016_223608/45943002/ccs	chr6	+	4287	31	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	75.7615044435864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185016	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_116185089_116185167_116185289_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201016_223608/460069/ccs	chr9	-	200	1	Intergenic	novelGene_5109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAATGAGTTGTTCCC	NA	False	NA	NA	False	NA	NA	NA	110243812	110243612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_110243600_110243800
m54284U_201016_223608/46008097/ccs	chr16	-	3370	21	NIC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	242.777526760613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8610172	8507463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516674_8529996_8530057_8534378_8534484_8574679_8574937_8610099
m54284U_201016_223608/46073911/ccs	chr15	-	2101	16	NNC	ENSMUSG00000023169.16	novel	6966	16	NA	NA	3730	-258	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_15	116.760076890843	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTCATAAATAATTTGCC	NA	False	NA	NA	False	NA	NA	NA	96536113	96474125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96536028
m54284U_201016_223608/46074329/ccs	chr1	-	222	1	Intergenic	novelGene_453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATGTACATGACT	NA	False	NA	NA	False	NA	NA	NA	166094496	166094274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_166094300_166094500
m54284U_201016_223608/46202977/ccs	chr1	+	1213	4	NNC	ENSMUSG00000039323.19	novel	1307	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_2	1673.19514701663	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGTGTGTGTCTTAC	1290	False	NA	11	True	ATTAAA	-11	NA	72863661	72891626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_72864124_72888244_72888385_72888722_72888864_72891156
m54284U_201016_223608/46205676/ccs	chr15	+	2514	5	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	855	junction_2	36.2249913733599	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88746388	88749929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_88746956_88747040_88747151_88747243_88747752_88748518_88748696_88748777
m54284U_201016_223608/46271281/ccs	chr12	-	196	1	Intergenic	novelGene_6638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATAATTGCACTCTTAG	3750	False	NA	NA	False	NA	NA	NA	54652756	54652560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_54652600_54652800
m54284U_201016_223608/46334695/ccs	chr11	+	3902	24	NIC	ENSMUSG00000060180.13	novel	6062	40	NA	NA	17702	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_21	20.5284624211406	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATGCTCTGCTGTGTT	NA	False	NA	22	True	AATAAA	-18	NA	67235630	67262412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67260134_67260231_67261745_67261881_67262313
m54284U_201016_223608/46335901/ccs	chrX	-	6570	10	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	852	junction_3	61.6747742418063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
m54284U_201016_223608/46400188/ccs	chr13	-	183	1	Intergenic	novelGene_7159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTACCATGTTTAAGAAC	NA	False	NA	NA	False	NA	NA	NA	64261070	64260887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64260900_64261100
m54284U_201016_223608/46401622/ccs	chr4	-	191	1	Intergenic	novelGene_1962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTCTCTTATAAAAAAAA	2371	False	NA	NA	False	NA	NA	NA	101901320	101901129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_101901100_101901300
m54284U_201016_223608/46402238/ccs	chrX	+	2174	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_3	67.8576942333489	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3176	False	NA	NA	False	AATAAA	-17	NA	151922976	151954939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
m54284U_201016_223608/46531796/ccs	chr17	+	3795	20	NNC	ENSMUSG00000061950.18	novel	664	7	NA	NA	274	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	79.4921902468998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCACCCACTTTGTTTC	NA	False	NA	17	True	AATAAA	-27	NA	66090048	66148851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_66090210_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
m54284U_201016_223608/46596138/ccs	chr5	-	3788	13	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_11	48.956542520439	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTGCATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	100648493	100589899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100633661_100633715_100648359
m54284U_201016_223608/46596190/ccs	chrX	-	191	1	Intergenic	novelGene_9716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTTTGTGATTA	NA	False	NA	NA	False	NA	NA	NA	161487994	161487803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161487800_161488000
m54284U_201016_223608/46598225/ccs	chr7	-	5471	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-481	0	intron_retention	FALSE	canonical	0	0	junction_11	32.0206544912746	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTGTCAAGCCATTT	NA	False	NA	-2	True	AATAAA	-29	NA	140908084	140877092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
m54284U_201016_223608/46598339/ccs	chr4	+	1253	10	NNC	ENSMUSG00000028601.19	novel	1307	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_4	242.073909742	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGCTGGAATTGTTGG	NA	False	NA	24	True	AATAAA	-17	NA	108022684	108036505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030079_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
m54284U_201016_223608/46598358/ccs	chr14	+	4439	23	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_20	73.8804176741204	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724403	20744920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742600_20742787_20742980_20743211_20743302_20743718
m54284U_201016_223608/46662533/ccs	chr19	+	2108	14	NIC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	23	junction_2	181.690581637082	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_45352326_45394983_45395026_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
m54284U_201016_223608/46663630/ccs	chr8	+	4388	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_10	44.0286365145837	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	14	True	AGTAAA	-15	NA	88925840	88986350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979154_88979202_88981736_88981902_88983726
m54284U_201016_223608/46663866/ccs	chr11	-	1392	4	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	746.295890083521	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATGTGTCCTGGTCTTT	6003	False	NA	-10	True	ATTAAA	-26	NA	116743920	116740731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116741180_116741681_116741788_116742846_116743158_116743393
m54284U_201016_223608/46794075/ccs	chr5	+	5210	20	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	41.3345917659083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTGTTTTTATTACC	NA	False	NA	NA	False	AATAAA	-23	NA	147366970	147485312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
m54284U_201016_223608/46795328/ccs	chr17	+	181	1	Intergenic	novelGene_8711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGGCTGAAGCATTAGA	2578	False	NA	NA	False	NA	NA	NA	71789794	71789975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71789800_71790000
m54284U_201016_223608/46859786/ccs	chr11	-	176	1	FSM	ENSMUSG00000082419.4	ENSMUST00000119608.2	498	1	391	-69	391	69	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTAGGGGCTGAAGGG	NA	False	NA	NA	False	AATAAA	-43	NA	82918432	82918256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_82918300_82918400
m54284U_201016_223608/46860275/ccs	chr1	-	211	1	Intergenic	novelGene_341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGACCGGATGCAAATA	5757	False	NA	NA	False	AAAAAG	-9	NA	135628288	135628077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_135628100_135628300
m54284U_201016_223608/46860328/ccs	chr4	-	7683	34	NIC	ENSMUSG00000033295.15	novel	7656	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	110.857091635313	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGTCTCAGCTCCTG	NA	False	NA	-2	True	AATAAA	-30	NA	118148602	118065409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118085015_118085043_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
m54284U_201016_223608/46925704/ccs	chr1	-	3213	9	NNC	ENSMUSG00000026398.15	novel	4733	9	NA	NA	824	182	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	15.8646619882051	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATAGTGTTTACATT	NA	False	NA	NA	False	AATAAA	-24	NA	136880544	136771831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136876459_136876598_136879839_136879903_136880319
m54284U_201016_223608/46926589/ccs	chr7	-	2228	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	121	0	intron_retention	FALSE	canonical	3	386	junction_1	122.965627126224	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5561	False	NA	-9	True	AATAAA	-14	NA	44519091	44512491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44512619_44512802_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
m54284U_201016_223608/46989792/ccs	chr4	+	2829	13	NIC	ENSMUSG00000073792.12	novel	3079	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	56.4121736270934	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCGTGTATTTCTT	NA	False	NA	18	True	ATTAAA	-18	NA	99603900	99651697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
m54284U_201016_223608/46990393/ccs	chr2	-	1680	7	NNC	ENSMUSG00000015787.16	novel	1811	6	NA	NA	64	-198	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	1.7950549357115	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTAGTTTCCCCCCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	26746746	26732712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_26733887_26735967_26736103_26736585_26736622_26738262_26738320_26738932_26739003_26746433_26746565_26746669
m54284U_201016_223608/46991709/ccs	chr17	+	4683	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	40.7135319325118	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
m54284U_201016_223608/47057064/ccs	chr6	+	2454	18	NIC	ENSMUSG00000025609.16	novel	11395	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	20	junction_5	167.370359891596	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31375770	31484903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409870_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
m54284U_201016_223608/47057338/ccs	chr5	+	518	6	NNC	ENSMUSG00000016833.15	novel	638	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	713.079630896859	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTGGAAATGTCTTTC	NA	False	NA	51	True	AATAAA	-33	NA	100946608	100952337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_100946727_100947417_100947480_100949777_100949858_100950918_100950977_100951835_100951896_100952197
m54284U_201016_223608/47187838/ccs	chrX	+	2567	7	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_5	12.5266382827424	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326355	73333757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332789_73332904
m54284U_201016_223608/4719379/ccs	chr5	+	3864	11	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_1	229.089414858042	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768514	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_32768720_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
m54284U_201016_223608/47253025/ccs	chr11	-	3236	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	54	-486	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	1089.57002378677	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8190	False	NA	-2	True	AATAAA	-23	NA	50216446	50185779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_50187163_50187884_50187962_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
m54284U_201016_223608/47253133/ccs	chr17	+	4446	4	NNC	ENSMUSG00000071037.7	novel	741	4	NA	NA	73	-36020	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	37.6769897358528	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTCAGTCCATCTGTGA	2300	False	NA	1	True	AATAAA	-37	NA	85398106	85437916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_85398292_85403917_85404091_85421210_85421276_85433893
m54284U_201016_223608/47318085/ccs	chr7	-	753	2	Intergenic	novelGene_4057	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGCCTTCTTCCTCTC	NA	False	NA	NA	False	NA	NA	NA	118622950	118610807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_118611350_118622739
m54284U_201016_223608/47318714/ccs	chr2	+	4679	5	NIC	ENSMUSG00000078875.11	novel	683	5	NA	NA	0	2787	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	44.7178655572915	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176692748	176707367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_176692840_176696293_176696349_176701473_176701601_176701806_176701868_176703022
m54284U_201016_223608/47516178/ccs	chr16	-	385	1	Intergenic	novelGene_8323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACTGGACAAGCTTCG	NA	False	NA	NA	False	ATTAAA	-31	NA	90910928	90910543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_90910500_90910900
m54284U_201016_223608/47580613/ccs	chr19	-	3352	25	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	0	-152	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_24	172.867402620878	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATGTAGAATATTTTTAA	NA	False	NA	-18	True	AATAAA	-15	NA	37340010	37247980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339780
m54284U_201016_223608/47645450/ccs	chr5	-	2427	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	1920	junction_7	152.553143325405	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2320	False	NA	-25	True	AATAAA	-15	NA	138170080	138162861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167987_138168578_138168659_138169987
m54284U_201016_223608/47711742/ccs	chr19	+	218	1	Intergenic	novelGene_9213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAATAAAAATAAA	NA	False	NA	NA	False	AATAAA	-27	NA	32287113	32287331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_32287100_32287300
m54284U_201016_223608/47776840/ccs	chr16	-	176	1	Intergenic	novelGene_8284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	5051	False	NA	NA	False	NA	NA	NA	55890331	55890155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_55890200_55890300
m54284U_201016_223608/47842359/ccs	chr7	-	3137	22	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	290	junction_20	343.696096577661	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153827	143111443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
m54284U_201016_223608/47842512/ccs	chr4	-	197	1	Intergenic	novelGene_1874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACAAAACAAAACAAAC	7514	False	NA	NA	False	NA	NA	NA	56857657	56857460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_56857500_56857700
m54284U_201016_223608/47843488/ccs	chrX	+	904	4	NNC	ENSMUSG00000095562.9	novel	583	3	NA	NA	-390	0	intron_retention	FALSE	canonical	3	229	junction_2	116.825606021207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAAGCCTGCGCCGACC	NA	False	NA	NA	False	NA	NA	NA	168792264	168801791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_168792487_168792588_168792759_168793669_168794060_168801669
m54284U_201016_223608/47843627/ccs	chr5	-	237	1	Intergenic	novelGene_2631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATGATACAAAATATCACT	NA	False	NA	NA	False	AATACA	-39	NA	77289913	77289676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77289700_77289900
m54284U_201016_223608/4785271/ccs	chr3	-	4503	9	NIC	ENSMUSG00000019338.14	novel	4617	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_8	23.3422230089595	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCTTTTCTTTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	94922759	94914142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922630
m54284U_201016_223608/4785306/ccs	chr2	-	1881	12	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	0	-500	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_11	165.622841479775	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGACGATGGTGGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	152174332	152158753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173022_152173953
m54284U_201016_223608/47908586/ccs	chr15	+	5145	8	NNC	ENSMUSG00000022412.15	novel	4097	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	83.1460480487344	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACGTGTCTATGTGGT	2828	False	NA	16	True	AATAAA	-18	NA	80118293	80137572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_80118383_80118882_80118982_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529_80135053_80135079
m54284U_201016_223608/47909650/ccs	chr12	+	2369	12	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	58.2940678552067	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1846	False	NA	11	True	AATAAA	-16	NA	84363888	84390497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_84363984_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
m54284U_201016_223608/47973151/ccs	chr18	+	4034	1	NIC	ENSMUSG00000036299.6	novel	979	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCCTGCTTTTTGTCTTT	NA	False	NA	26	True	ATTAAA	-17	NA	75138970	75143004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_75139000_75143000
m54284U_201016_223608/48039450/ccs	chr12	-	1519	11	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_10	69.6330381356436	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7660	False	NA	-3	True	AATATA	-18	NA	110807373	110774231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
m54284U_201016_223608/48104564/ccs	chr2	-	1832	11	NNC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	65	-347	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_10	90.9712042351864	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTACATGCTGGATTCT	NA	False	NA	-8	True	AATAAA	-18	NA	155571330	155543943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571196
m54284U_201016_223608/48171637/ccs	chr1	-	4302	13	NIC	ENSMUSG00000070643.12	novel	3693	14	NA	NA	-80	0	intron_retention	FALSE	canonical	3	41	junction_7	18.2412459978905	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGTGCCCTTTCTCTGCT	NA	False	NA	-8	True	AATAAA	-15	NA	133352195	133310040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_133312412_133313203_133313348_133313731_133313829_133313922_133314033_133314503_133314667_133314821_133314905_133316186_133316299_133316666_133316736_133317061_133317235_133318296_133318384_133318466_133318579_133320810_133321010_133351613
m54284U_201016_223608/48236192/ccs	chr7	+	794	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	204.430330430687	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	8193	False	NA	25	True	AATAAA	-25	NA	101545990	101548751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_101546021_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
m54284U_201016_223608/48236866/ccs	chr17	-	161	1	Intergenic	novelGene_8739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	80427918	80427757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_80427800_80427900
m54284U_201016_223608/48237312/ccs	chr2	-	199	1	Intergenic	novelGene_835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAAGATATCTATTTAA	NA	False	NA	NA	False	NA	NA	NA	69738202	69738003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_69738000_69738200
m54284U_201016_223608/48300987/ccs	chr2	-	2481	14	NIC	ENSMUSG00000009566.13	novel	2273	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	280	junction_7	42.3982248149097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32584147	32572621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
m54284U_201016_223608/48301286/ccs	chr7	+	3378	10	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	7.83786315046595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATGTTTCCTCAATGA	NA	False	NA	1	True	AATAAA	-20	NA	19725389	19796865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
m54284U_201016_223608/48301410/ccs	chr15	-	1741	10	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_9	124.308258816044	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8666	False	NA	-2	True	AATAAA	-21	NA	76501048	76496582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76500772
m54284U_201016_223608/48301910/ccs	chr9	+	4107	21	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	86.9113916584011	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974254	80051453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
m54284U_201016_223608/48367555/ccs	chr13	+	167	1	Intergenic	novelGene_7322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAACTAGTATA	NA	False	NA	NA	False	NA	NA	NA	117344043	117344210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_117344000_117344200
m54284U_201016_223608/48433503/ccs	chr17	+	3681	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_23	184.283407530671	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
m54284U_201016_223608/48628677/ccs	chr19	+	4305	11	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	125	junction_1	17.592327873252	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159032	42180156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
m54284U_201016_223608/48630458/ccs	chr14	-	177	1	Intergenic	novelGene_7465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTATACACTTG	NA	False	NA	NA	False	NA	NA	NA	55117015	55116838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_55116800_55117000
m54284U_201016_223608/48694211/ccs	chrX	+	728	5	NIC	ENSMUSG00000000355.14	novel	783	6	NA	NA	0	98	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	253.564094461341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGACTCAATGTCCTAT	NA	False	NA	10	True	ATTAAA	-23	NA	37689531	37702401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_37689656_37691452_37691551_37694815_37694950_37700642_37700711_37702097
m54284U_201016_223608/48694245/ccs	chr4	-	3716	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	118	junction_11	58.8548740018329	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7420	False	NA	-6	True	TATAAA	-12	NA	155753655	155739139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
m54284U_201016_223608/48694796/ccs	chr1	+	337	1	Intergenic	novelGene_209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAAAATTTTTAAAAGAAA	NA	False	NA	NA	False	ATTAAA	-3	NA	80294571	80294908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_80294600_80294900
m54284U_201016_223608/48694903/ccs	chr3	+	187	1	Intergenic	novelGene_1615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAAGATGTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	104434598	104434785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_104434600_104434800
m54284U_201016_223608/48694960/ccs	chr15	-	2095	10	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	77	junction_9	343.824388135198	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432145	98416700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
m54284U_201016_223608/48695713/ccs	chr19	+	1928	11	NIC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	55.2485293921929	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	7024	False	NA	12	True	NA	NA	NA	8719251	8733006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8719519_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
m54284U_201016_223608/48761185/ccs	chr4	+	2682	4	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	19.9053315024448	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_147637884_147661528_147661587_147665716_147665826_147667290
m54284U_201016_223608/48824773/ccs	chr3	+	5131	11	NNC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	0	-2966	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	117.739585526704	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTCCACCTCATTTTT	-10	True	NA	NA	False	AATAAA	-19	NA	88593120	88613249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88609426
m54284U_201016_223608/48891327/ccs	chr17	+	4497	18	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	287.115977916741	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320744	6358589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_6320866_6330872_6330977_6335503_6335596_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
m54284U_201016_223608/48891694/ccs	chr1	+	4930	1	NIC	ENSMUSG00000070871.11	novel	3281	11	NA	NA	103	-15599	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATTGACAGCAACTCAT	NA	False	NA	NA	False	NA	NA	NA	64730083	64735013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_64730100_64735000
m54284U_201016_223608/48955804/ccs	chr12	-	3395	10	NIC	ENSMUSG00000021224.16	novel	3549	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	34.4383507154451	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968641	83840809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
m54284U_201016_223608/48956414/ccs	chr2	-	3153	11	NIC	ENSMUSG00000026925.17	novel	2790	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_10	12.6826653350153	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCTGGCCAAAGAGTG	983	False	NA	3	True	AATAAA	-23	NA	26299215	26287065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778_26298822_26299013
m54284U_201016_223608/49023522/ccs	chr6	-	3290	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	47	junction_14	894.90189158117	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875683	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870494_88874268_88874499_88875626
m54284U_201016_223608/4917021/ccs	chr10	-	212	1	Intergenic	novelGene_5268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGTAAATGAGTACTTA	NA	False	NA	NA	False	NA	NA	NA	40055451	40055239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_40055200_40055500
m54284U_201016_223608/4917660/ccs	chr4	-	2522	7	NNC	ENSMUSG00000040550.18	novel	2647	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_5	96.2042098870938	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGAAGTAATGTTATC	23	True	NA	-2	True	AATAAA	-12	NA	14826395	14810045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822769_14825498_14825654_14826290
m54284U_201016_223608/4917690/ccs	chr6	+	192	1	Intergenic	novelGene_3330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGCCTCATTATATAG	NA	False	NA	NA	False	NA	NA	NA	72804167	72804359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_72804200_72804400
m54284U_201016_223608/4917965/ccs	chr17	-	1634	7	NIC	ENSMUSG00000024327.17	novel	1550	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	218.983763984659	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250636	34247246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34250521
m54284U_201016_223608/49220011/ccs	chr11	-	2843	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	0	85	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	71.3401009250758	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174158	52143112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_52144644_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
m54284U_201016_223608/49283831/ccs	chr11	+	221	1	Intergenic	novelGene_5732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTAAGGGTTGAGCCTT	4022	False	NA	NA	False	NA	NA	NA	23036865	23037086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_23036900_23037100
m54284U_201016_223608/49284353/ccs	chr5	+	3764	10	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_1	248.962489117647	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768514	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_32768720_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
m54284U_201016_223608/49351231/ccs	chr1	+	1628	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	167	junction_4	31.580584752872	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187491	75190886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189873_75190219_75190342_75190457
m54284U_201016_223608/49351238/ccs	chr7	+	2005	6	NNC	ENSMUSG00000045411.17	novel	1982	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	300.883100223326	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896248_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201016_223608/49351474/ccs	chr6	+	1695	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	276	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	140.564575907303	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5726	False	NA	7	True	AATAAA	-17	NA	83254374	83280734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83254554_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
m54284U_201016_223608/49414579/ccs	chr5	-	4117	26	NIC	ENSMUSG00000029480.14	novel	4760	27	NA	NA	0	383	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	34.6997636879561	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGGCTATTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	125511185	125491468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
m54284U_201016_223608/49480282/ccs	chr1	-	196	1	Intergenic	novelGene_114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTTGCTTTATTTATGT	NA	False	NA	NA	False	NA	NA	NA	47813447	47813251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_47813300_47813400
m54284U_201016_223608/49807912/ccs	chr11	-	3619	19	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	74.3837439097058	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844882	103712607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
m54284U_201016_223608/49807995/ccs	chr5	+	3046	17	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	98.0280572081279	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283725	110319838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110283801_110283916_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
m54284U_201016_223608/49810067/ccs	chr7	+	3421	9	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	121.410203442709	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGACTATAGCGTGT	NA	False	NA	27	True	NA	NA	NA	12568963	12584504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_12569092_12569373_12569455_12569881_12569988_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
m54284U_201016_223608/4982525/ccs	chr1	+	1179	10	NIC	ENSMUSG00000026197.13	novel	1206	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	43.344727846634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGAGTGCTGTTTCTT	2052	False	NA	12	True	AGTAAA	-18	NA	75145309	75148269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75145352_75145477_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
m54284U_201016_223608/4983538/ccs	chr2	-	158	1	Intergenic	novelGene_892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCGGCTGACCTTGAAT	NA	False	NA	NA	False	NA	NA	NA	83544297	83544139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_83544100_83544300
m54284U_201016_223608/49873701/ccs	chr3	+	3296	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_7	435.808317956415	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6111	False	NA	NA	False	AATAAA	-26	NA	88461070	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472341_88472398_88472519_88472636_88472997_88473185_88475387
m54284U_201016_223608/49873928/ccs	chr2	-	3040	12	NNC	ENSMUSG00000027206.14	novel	3392	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_9	266.946461342233	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTGTGTGCATGTGA	NA	False	NA	-4	True	AATAAA	-22	NA	125700916	125672223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125690188_125690205_125691659_125691774_125700855
m54284U_201016_223608/49874461/ccs	chr2	+	7302	20	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	52.8005183387635	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4619	False	NA	33	True	AATAAA	-25	NA	20524424	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
m54284U_201016_223608/49875248/ccs	chr17	+	4004	20	NIC	ENSMUSG00000024044.20	novel	2703	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	4	junction_1	15.2069746354206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69382746	69596984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
m54284U_201016_223608/50005367/ccs	chr12	-	3822	1	Intergenic	novelGene_6835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	93509221	93505399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_93505400_93509200
m54284U_201016_223608/50137059/ccs	chr12	+	1373	9	NNC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	0	-1689	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	1484.77762960485	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGCTTCTTCCTTCTT	NA	False	NA	24	True	AATAAA	-17	NA	78908858	78932095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_78908955_78913299_78913370_78913446_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
m54284U_201016_223608/50137189/ccs	chr4	+	266	1	Intergenic	novelGene_1916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACTTTAAAGCA	5089	False	NA	NA	False	NA	NA	NA	83347344	83347610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_83347300_83347600
m54284U_201016_223608/50202768/ccs	chr19	-	3026	8	NIC	ENSMUSG00000025218.7	novel	2324	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_7	12.7775312999988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGCTGTCTGTGAGCT	NA	False	NA	2	True	AATAAA	-19	NA	45548970	45540713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_45541610_45541947_45542117_45543529_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
m54284U_201016_223608/50203131/ccs	chr11	-	2009	12	NNC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	132.301621336492	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193112	101179087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186405_101187083_101187143_101189834_101189903_101192553_101192683_101192957
m54284U_201016_223608/50268735/ccs	chr15	-	170	1	Intergenic	novelGene_7858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGTATGAAACA	6386	False	NA	NA	False	NA	NA	NA	81962956	81962786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81962800_81963000
m54284U_201016_223608/50333299/ccs	chrX	+	1109	3	NIC	ENSMUSG00000087193.8	novel	1177	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	23	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGGCCACTGGATTTT	NA	False	NA	29	True	TATAAA	-19	NA	7917829	7939198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7917897_7936874_7937304_7938585
m54284U_201016_223608/50333676/ccs	chr16	+	2861	18	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	287	junction_1	39.4304608859032	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688630	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
m54284U_201016_223608/50334533/ccs	chr3	+	3164	18	NIC	ENSMUSG00000058388.15	novel	5647	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	19.101984534304	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875681	103914806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
m54284U_201016_223608/50594907/ccs	chr11	-	2692	3	Intergenic	novelGene_6530	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	94	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTTGTCTTGCTTGGT	NA	False	NA	-3	True	NA	NA	NA	121816149	121795185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_121797657_121799014_121799142_121816055
m54284U_201016_223608/50595018/ccs	chr3	+	6697	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	35	junction_21	21.8596322932791	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6152	False	NA	12	True	AAGAAA	-13	NA	87524865	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
m54284U_201016_223608/50660596/ccs	chr19	+	6393	35	NIC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	0	-105	intron_retention	FALSE	canonical	3	156	junction_7	35.7605938038528	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079206	47119585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
m54284U_201016_223608/50726713/ccs	chr7	-	6616	6	NIC	ENSMUSG00000044452.11	novel	6693	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	25.6093732840146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCTAAGTTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	35502428	35471767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35502258
m54284U_201016_223608/50857706/ccs	chr15	+	1668	8	NIC	ENSMUSG00000022553.17	novel	1686	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	221.621114443879	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGAGTTTGTGGGGGCG	NA	False	NA	31	True	AATAAA	-23	NA	76235526	76238580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76235860_76236623_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
m54284U_201016_223608/50921730/ccs	chr13	+	1025	9	NIC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	310.456921327259	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337553	85361029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345649_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
m54284U_201016_223608/50921763/ccs	chr2	-	5173	8	ISM	ENSMUSG00000074994.7	ENSMUST00000231375.2	9037	12	-234	15188	-234	-15188	5prime_fragment	FALSE	canonical	3	39	junction_1	21.0877660635502	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTTGTTTTATTTTGT	NA	False	NA	-8	True	AATAAA	-15	NA	104647339	104600327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
m54284U_201016_223608/50922354/ccs	chr13	+	1671	7	NIC	ENSMUSG00000021420.14	novel	2125	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	85.194711625129	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36301636	36721567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_36301777_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
m54284U_201016_223608/50924043/ccs	chr2	+	1278	1	FSM	ENSMUSG00000075312.5	ENSMUST00000121239.2	375	1	-53	-850	-53	850	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTGGTTTAATAAGTC	NA	False	NA	NA	False	AATAAA	-44	NA	68384845	68386123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_68384800_68386100
m54284U_201016_223608/50924086/ccs	chr2	+	185	1	Intergenic	novelGene_1038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTTAAAGTATGCTGG	NA	False	NA	NA	False	NA	NA	NA	121853271	121853456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121853300_121853500
m54284U_201016_223608/50989321/ccs	chr5	+	177	1	Intergenic	novelGene_2669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATGTGAGTTCC	NA	False	NA	NA	False	NA	NA	NA	92269176	92269353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92269200_92269400
m54284U_201016_223608/51052992/ccs	chr5	+	1858	14	NIC	ENSMUSG00000029095.18	novel	3042	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_11	15.4395174220198	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTCCCAAACAGCCTAAG	1513	False	NA	5	True	AAAACA	-8	NA	35915223	36015530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169
m54284U_201016_223608/51053861/ccs	chr11	-	1315	1	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	15831	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTAAGGCAGGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	86104228	86102913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_86102900_86104200
m54284U_201016_223608/51120953/ccs	chr6	-	2650	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_12	239.071333482446	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
m54284U_201016_223608/5112843/ccs	chr4	+	1587	8	NNC	ENSMUSG00000023286.17	novel	3483	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_6	437.485953127267	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	787	False	NA	37	True	TATAAA	-19	NA	156028317	156042171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040023_156040824_156040906_156041537
m54284U_201016_223608/51315846/ccs	chr7	-	2120	10	NIC	ENSMUSG00000060601.14	novel	1999	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	245.647343327687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGAGCCCAGTGTGGAG	NA	False	NA	0	True	AATAAA	-31	NA	44203375	44199039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201789_44201930_44202045_44202120_44202179_44203002_44203133_44203232
m54284U_201016_223608/51446073/ccs	chr9	-	3170	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	62.7010326959117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
m54284U_201016_223608/51511557/ccs	chr9	+	6631	22	NNC	ENSMUSG00000041444.15	novel	540	6	NA	NA	-83733	77	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_1	7.18653313520513	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCCTCCCACTCATTAC	NA	False	NA	NA	False	AATAAA	-14	NA	31943698	32172591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_31944029_32040865_32040975_32063217_32063310_32064335_32064421_32081385_32081473_32093137_32093276_32097624_32097718_32098929_32099053_32101279_32101358_32119479_32119562_32150557_32150708_32156447_32156551_32157213_32157359_32157742_32157826_32158403_32158512_32158781_32158928_32159675_32159872_32161937_32162084_32165362_32165435_32166469_32167355_32168008_32168995_32170197
m54284U_201016_223608/51511999/ccs	chr14	-	647	7	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	212.21091447478	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATGCACTGTTACTTA	NA	False	NA	-2	True	CATAAA	-15	NA	47059699	47049130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053054_47053106_47053634_47053685_47054842_47054940_47059557
m54284U_201016_223608/51577912/ccs	chr6	-	1519	8	NIC	ENSMUSG00000068329.13	novel	1725	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	183.177063888179	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGGTTGGATCTTCTCC	2026	False	NA	2	True	AATAAA	-31	NA	83031423	83028246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029708_83030018_83030052_83030309_83030505_83030593_83030799_83030901
m54284U_201016_223608/51578860/ccs	chr1	-	6145	30	NIC	ENSMUSG00000056536.15	novel	6759	31	NA	NA	0	-509	combination_of_known_junctions	FALSE	canonical	3	20	junction_28	13.8006014103214	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTAATTTTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	105591402	105446659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105587017_105587092_105591224
m54284U_201016_223608/51644314/ccs	chr1	-	3120	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	-159	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_21	113.919247896579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTATTAACATCTGAAC	NA	False	NA	-1	True	AATAAA	-22	NA	180971769	180920982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969882_180969965_180971615
m54284U_201016_223608/51708084/ccs	chr1	-	5847	10	ISM	ENSMUSG00000055322.17	ENSMUST00000187691.7	2813	12	3137	-3679	2841	0	3prime_fragment	FALSE	canonical	3	66	junction_7	9.39266853573691	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGCCTGGCTTCGTT	NA	False	NA	-3	True	TATAAA	-22	NA	73964535	73949390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864
m54284U_201016_223608/51709185/ccs	chr9	+	991	1	ISM	ENSMUSG00000032097.11	ENSMUST00000170489.2	6065	14	34849	0	34844	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCTTGTATGTATGTTC	NA	False	NA	17	True	AATAAA	-18	NA	44551037	44552028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_44551000_44552000
m54284U_201016_223608/51709200/ccs	chr5	+	2129	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_13	250.045261208968	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGGTCCTGTTGTTTA	NA	False	NA	35	True	ACTAAA	-23	NA	33815929	33829545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829069_33829130_33829325
m54284U_201016_223608/51774776/ccs	chr8	+	2504	4	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	68	0	intron_retention	FALSE	canonical	3	95	junction_1	4.10960933531265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTATTTATT	NA	False	NA	11	True	ATTAAA	-24	NA	84752771	84756924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84752904_84753377_84753714_84754754_84754801_84754934
m54284U_201016_223608/51839923/ccs	chr11	+	1951	4	NIC	ENSMUSG00000046756.11	novel	1962	5	NA	NA	219	360	intron_retention	FALSE	canonical	3	642	junction_3	43.1508980207828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCAGTCTTCCATTCTG	NA	False	NA	5	True	NA	NA	NA	115494969	115498187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115495070_115495546_115495739_115495848_115496964_115497643
m54284U_201016_223608/51906672/ccs	chr1	+	168	1	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTTTTTTGTTT	NA	False	NA	10	True	NA	NA	NA	13160436	13160604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_13160400_13160600
m54284U_201016_223608/51970192/ccs	chr2	+	3754	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	561	junction_4	193.045616370846	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201016_223608/51970222/ccs	chr11	+	4027	28	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	245.871390651171	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115715850_115716079_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
m54284U_201016_223608/52036227/ccs	chr11	+	156	2	Intergenic	novelGene_5835	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	44	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAGTAAATAAATATTTA	NA	False	NA	NA	False	NA	NA	NA	53344505	53569200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53344554_53569092
m54284U_201016_223608/52036836/ccs	chr9	-	1944	1	FSM	ENSMUSG00000059422.6	ENSMUST00000182917.2	1201	1	-77	-666	-77	666	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTCGAATTAGAAATTA	NA	False	NA	NA	False	AATAAA	-21	NA	78729197	78727253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_78727300_78729200
m54284U_201016_223608/52038215/ccs	chr11	+	266	1	Intergenic	novelGene_6316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGTAATTAGATGTAGC	NA	False	NA	NA	False	AATGAA	-11	NA	99760943	99761209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_99760900_99761200
m54284U_201016_223608/52103298/ccs	chr6	+	146	1	Intergenic	novelGene_3506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	124985219	124985365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_124985200_124985400
m54284U_201016_223608/52167102/ccs	chr4	+	2801	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	208.120662116956	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9714	False	NA	34	True	AATAAA	-20	NA	155648298	155675454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
m54284U_201016_223608/52232664/ccs	chr4	-	1977	1	Antisense	novelGene_ENSMUSG00000058006.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32735091	32733114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_32733100_32735100
m54284U_201016_223608/52300532/ccs	chr12	-	2523	5	NNC	ENSMUSG00000021067.9	novel	2524	5	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	61.6699886492612	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGGTCCTTGAATGCA	NA	False	NA	-14	True	ATTAAA	-17	NA	70033841	70011785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_70013122_70015843_70015988_70022741_70023013_70030982_70031361_70033447
m54284U_201016_223608/52365301/ccs	chr15	-	1078	1	FSM	ENSMUSG00000082585.4	ENSMUST00000120421.2	648	1	97	-527	97	527	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACAGGCTGAGAAAAAA	NA	False	NA	NA	False	AGTAAA	-41	NA	73966085	73965007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_73965000_73966100
m54284U_201016_223608/52429165/ccs	chr17	+	1061	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	419.268219639886	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	21	True	AATAAA	-29	NA	48717041	48724294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_48717123_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
m54284U_201016_223608/52429921/ccs	chr4	-	2389	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	0	-657	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTAGCGGCGACCCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	141327343	141304029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327256
m54284U_201016_223608/5244323/ccs	chr17	+	2071	5	NIC	ENSMUSG00000023882.16	novel	2832	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	8.22724133595217	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCGTTTTGTTTTCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	21643519	21655416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_21643580_21647593_21647634_21647998_21648091_21650456_21650584_21653664
m54284U_201016_223608/52494628/ccs	chr4	+	1055	5	NNC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	0	-96	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	710.853887940412	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAAGTGTCTGTTGTTG	NA	False	NA	21	True	AATAAA	-21	NA	155789580	155818240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155789919_155799918_155800063_155815781_155815922_155816380_155816503_155817929
m54284U_201016_223608/52496521/ccs	chr5	-	5320	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31026	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	25.1701353648667	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATTCTCTGCCTTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	3783158	3739999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
m54284U_201016_223608/52628244/ccs	chr7	-	195	1	Intergenic	novelGene_3718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAAGATGGTCAGTTCC	NA	False	NA	NA	False	AAGAAA	-3	NA	26992492	26992297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_26992300_26992500
m54284U_201016_223608/526881/ccs	chr11	+	2334	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_1	26.418755029031	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATAAGAATCTGGGAGT	7673	False	NA	28	True	AATAAA	-35	NA	58197894	58205453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
m54284U_201016_223608/52691949/ccs	chr7	-	2885	4	NIC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	-54	0	intron_retention	FALSE	canonical	3	463	junction_1	137.152793952179	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	156	False	NA	-31	True	AATAAA	-14	NA	126625798	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126622341_126623615_126623788_126624047_126625327_126625399
m54284U_201016_223608/52756758/ccs	chr8	+	2075	9	NIC	ENSMUSG00000031728.11	novel	2127	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_2	4.9180788932265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCCCTTGTCTCAT	NA	False	NA	8	True	AATAAA	-21	NA	110432251	110451564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_110432496_110432988_110433052_110434660_110434777_110436042_110436160_110444393_110444539_110447826_110447976_110448385_110448491_110449518_110449686_110450595
m54284U_201016_223608/52758507/ccs	chr11	-	4564	9	NIC	ENSMUSG00000005949.10	novel	2723	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_8	9.19238815542512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCGGAACGTTTACTAG	4465	False	NA	-1	True	ATTAAA	-23	NA	73089868	73074422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_73075878_73076063_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
m54284U_201016_223608/52822414/ccs	chr2	+	7185	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	54.0828125866615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4619	False	NA	33	True	AATAAA	-25	NA	20524424	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20810395_20810474_20810585_20812185_20812712_20812836_20813520
m54284U_201016_223608/52824674/ccs	chr18	-	3996	18	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	38.8663756441135	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-23	True	NA	-23	True	AATAAA	-14	NA	6135970	6025216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6111684_6112440_6115813_6115851_6135803
m54284U_201016_223608/52953978/ccs	chr12	-	3926	8	NIC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	750	junction_7	42.3450356100491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGAGGGTGTTGCAGTG	NA	False	NA	-12	True	ATTAAA	-20	NA	103392083	103374240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_103374737_103376186_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
m54284U_201016_223608/53085776/ccs	chr8	-	1529	18	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_13	459.404089715208	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052713_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
m54284U_201016_223608/53086117/ccs	chr8	-	1696	5	NIC	ENSMUSG00000004996.10	novel	2819	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	94.3699501960237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTATTTACTTTTATTT	6964	False	NA	NA	False	NA	NA	NA	84983955	84977650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84978341_84980491_84980717_84980813_84980982_84982872_84983049_84983518
m54284U_201016_223608/53087007/ccs	chr4	-	1259	10	NIC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_6	304.035816603534	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033744	123020907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033694
m54284U_201016_223608/53151547/ccs	chr2	+	1099	8	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	112.260811487885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	172	False	NA	13	True	AATAAA	-13	NA	26476641	26482694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26482129_26482293_26482429
m54284U_201016_223608/53152236/ccs	chr4	-	1973	3	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9758	1205	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	2.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTGTTTGTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	101828488	101823444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_101824980_101825125_101825438_101828362
m54284U_201016_223608/53217737/ccs	chr7	+	1362	4	NNC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	150.608395811418	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGAGCTGCGTGAGTGT	NA	False	NA	36	True	AATAAA	-30	NA	24206523	24215107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_24206862_24208193_24208403_24209970_24210179_24214500
m54284U_201016_223608/53281110/ccs	chr3	+	6544	18	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	0	387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	105.578944372492	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATCTTGGGTCTGGTTT	NA	False	NA	10	True	AATATA	-11	NA	88682522	88733281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88706921_88707026_88715213_88715410_88715859_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
m54284U_201016_223608/53282455/ccs	chr10	+	1947	18	NIC	ENSMUSG00000015889.9	novel	2029	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_16	100.405509988178	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTCATTTTTGG	NA	False	NA	22	True	AATACA	-21	NA	93289272	93320737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
m54284U_201016_223608/53346859/ccs	chr7	-	3526	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_17	279.491264378523	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198273	44182174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189873_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
m54284U_201016_223608/53478096/ccs	chr5	-	3313	16	NNC	ENSMUSG00000029207.17	novel	6333	16	NA	NA	23569	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_15	19.4792196968975	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTCTTTTCAGATGGT	NA	False	NA	NA	False	ATTAAA	-24	NA	66752414	66459214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66752306
m54284U_201016_223608/53478371/ccs	chr9	+	2523	6	NIC	ENSMUSG00000032567.17	novel	2349	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_4	18.4932420089069	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105272590	105282666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_105272865_105273743_105275058_105278674_105278886_105279916_105279976_105280594_105280791_105282197
m54284U_201016_223608/53543632/ccs	chr2	-	378	4	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5298	-846	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_3	127.14908135291	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCATGACTGTAACCA	NA	False	NA	-41	True	NA	NA	NA	176964127	176957292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_176957402_176958542_176958604_176958795_176958923_176964046
m54284U_201016_223608/53544406/ccs	chr10	+	186	1	Intergenic	novelGene_5487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGAGTTGCAC	NA	False	NA	NA	False	NA	NA	NA	85513960	85514146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_85514000_85514100
m54284U_201016_223608/53608563/ccs	chr9	-	2468	7	NIC	ENSMUSG00000025786.18	novel	2492	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	97.6774738048077	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTCTGCTCTCTCCC	8714	False	NA	-1	True	AATAAA	-16	NA	122942269	122905896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929323_122929658_122942060
m54284U_201016_223608/53609909/ccs	chr7	-	2731	6	NIC	ENSMUSG00000057342.16	novel	2577	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_5	25.7480096318143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGACATCCCTTTCAGTT	3262	False	NA	-6	True	AATAAA	-35	NA	45367326	45359690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45361236_45361481_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
m54284U_201016_223608/53674495/ccs	chr1	-	4408	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_11	20.8533907392885	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6554	False	NA	NA	False	AAGAAA	-10	NA	92108063	91860478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107723
m54284U_201016_223608/53674847/ccs	chr19	-	5296	10	NIC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_9	36.3402983470227	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGACTTTAAAAA	4171	False	NA	7	True	NA	NA	NA	4384029	4366197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4383670
m54284U_201016_223608/5375741/ccs	chr12	+	2516	11	NIC	ENSMUSG00000021258.11	novel	2789	12	NA	NA	82	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	19.4483932498291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTTATGTGTGAGTACAG	NA	False	NA	24	True	AATAAA	-17	NA	108146078	108169616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_108146140_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334
m54284U_201016_223608/53806153/ccs	chr11	-	177	1	Intergenic	novelGene_5859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAGTCAACTTTCT	NA	False	NA	NA	False	NA	NA	NA	57534184	57534007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57534000_57534200
m54284U_201016_223608/53873374/ccs	chr7	-	189	1	Intergenic	novelGene_3639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGGCTGAGTAATATC	NA	False	NA	NA	False	NA	NA	NA	6265117	6264928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_6264900_6265100
m54284U_201016_223608/53936701/ccs	chr2	+	3558	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-82	983	intron_retention	FALSE	canonical	3	2774	junction_1	161.951810390896	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896524	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201016_223608/53937503/ccs	chr19	-	1644	8	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_7	67.6669515090684	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9773	False	NA	NA	False	AGTAAA	-14	NA	60215129	60187330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214741
m54284U_201016_223608/54001953/ccs	chr16	-	1801	10	NNC	ENSMUSG00000022889.8	novel	523	2	NA	NA	0	-1517	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	316.524880538639	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTTTATAAACTTAATGA	NA	False	NA	NA	False	NA	NA	NA	84532118	84515980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_84516809_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
m54284U_201016_223608/54134333/ccs	chr11	-	3253	15	NNC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	0	-486	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_14	1051.7507173416	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8136	False	NA	-2	True	AATAAA	-23	NA	50216500	50185779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216355
m54284U_201016_223608/54265070/ccs	chr5	-	1938	14	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	150.475380832502	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755302	22691486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751503_22752921_22753015_22755189
m54284U_201016_223608/54330874/ccs	chr2	-	3449	9	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-119	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	29.756301853557	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTCTGTGCTGG	NA	False	NA	0	True	AATAAA	-21	NA	19003056	18847065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18893862_18894016_18911039_18911137_18912865_18912964_19002662
m54284U_201016_223608/54331214/ccs	chr16	-	3344	18	NNC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	68.7278872900185	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGCATCTACCTTTT	NA	False	NA	-13	True	AATAAA	-26	NA	17540772	17469074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473409_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
m54284U_201016_223608/5439831/ccs	chr17	+	3739	3	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	1.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGTGGCCTTGGGCTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	80540209	80553790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_80540468_80549334_80549558_80550532
m54284U_201016_223608/5440810/ccs	chr4	-	176	1	Intergenic	novelGene_2165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAAAAGGAGGAGG	6335	False	NA	0	True	NA	NA	NA	129817002	129816826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129816800_129817000
m54284U_201016_223608/5441080/ccs	chr4	-	2605	12	NIC	ENSMUSG00000028538.13	novel	2225	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.3545438866066	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	1862	False	NA	-5	True	AATAAA	-14	NA	117992111	117789354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991586
m54284U_201016_223608/5441386/ccs	chr2	-	2093	11	NNC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	-9003	0	intron_retention	FALSE	canonical	3	13	junction_2	42.1739255939022	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5051011	5025452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_5026293_5028877_5028958_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797
m54284U_201016_223608/5441877/ccs	chr1	+	2901	7	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	255	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	381.836243259682	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	1117	False	NA	38	True	AATAAA	-23	NA	74545473	74570001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74566150_74566250_74566750_74566843_74567844
m54284U_201016_223608/54462844/ccs	chr18	-	181	1	Intergenic	novelGene_9025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATTTCCAGTTTTG	NA	False	NA	NA	False	NA	NA	NA	76476978	76476797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_76476800_76477000
m54284U_201016_223608/54526129/ccs	chr6	+	1909	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	178.740889433715	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATGTATGGTTTGGGC	13	True	NA	2	True	AATAAA	-18	NA	30048027	30144854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
m54284U_201016_223608/54528395/ccs	chr17	-	3897	4	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_2	115.274551494344	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGTTTTTTATTAATTT	8783	False	NA	1	True	AATAAA	-19	NA	66258132	66230059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66233462_66236541_66236809_66255652_66255810_66258061
m54284U_201016_223608/54528743/ccs	chr7	+	1345	9	NNC	ENSMUSG00000030825.20	novel	1400	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	224.43707358634	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGAGTGGTCGTGTCCT	NA	False	NA	10	True	NA	NA	NA	45204360	45216745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215554_45215641_45216070
m54284U_201016_223608/54591686/ccs	chr2	+	1981	12	NIC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	106.160567612002	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162859410	162888061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162859454_162864294_162864420_162865269_162865358_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
m54284U_201016_223608/54591694/ccs	chr11	-	4604	5	NNC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	94	junction_3	526.057268745524	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720794	96708256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_96711343_96712076_96712236_96712929_96713113_96718023_96719050_96720644
m54284U_201016_223608/54592905/ccs	chr7	+	3797	11	NIC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	0	-68	intron_retention	FALSE	canonical	1	9	junction_1	99.8957456551579	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109820938	109882645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_109821117_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
m54284U_201016_223608/54593825/ccs	chr15	+	195	1	Intergenic	novelGene_7785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTAAACCAGAAGCTACG	NA	False	NA	NA	False	NA	NA	NA	76814357	76814552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76814400_76814600
m54284U_201016_223608/54594214/ccs	chr19	+	2924	8	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	140.719434278544	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	3925	False	NA	21	True	TATAAA	-24	NA	53933303	54021562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_53933327_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
m54284U_201016_223608/54788984/ccs	chr9	-	2464	9	NIC	ENSMUSG00000006675.11	novel	1841	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_4	18.9369843164111	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCCCGCTTGGGGGAGGGG	NA	False	NA	2	True	AATAAA	-36	NA	108474779	108456060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108456508_108456914_108457039_108457214_108458104_108459040_108459204_108459280_108459379_108460045_108460143_108460840_108461032_108474097_108474180_108474406
m54284U_201016_223608/54789336/ccs	chr8	-	3360	13	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_10	325.022264194658	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426975	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370672_70388428_70388687_70403302_70403405_70426739
m54284U_201016_223608/54789978/ccs	chr7	+	2000	11	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	301.433309373732	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835206	63861175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_63835372_63836134_63836221_63847024_63847105_63848910_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
m54284U_201016_223608/54790070/ccs	chr8	-	2845	3	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	166.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGAGTTGCTTCCTT	NA	False	NA	NA	False	AATAAA	-23	NA	87611886	87570946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_87571670_87587053_87588739_87611449
m54284U_201016_223608/54856254/ccs	chr2	-	202	1	Intergenic	novelGene_1228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGGCTCAGCAGTTAAA	NA	False	NA	NA	False	NA	NA	NA	165757968	165757766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_165757800_165758000
m54284U_201016_223608/54985902/ccs	chr1	-	2188	1	Intergenic	novelGene_365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATACA	-14	NA	143681581	143679393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_143679400_143681600
m54284U_201016_223608/54986670/ccs	chr10	+	5298	12	NIC	ENSMUSG00000037608.17	novel	5307	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	221	junction_3	266.237450718882	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2793	False	NA	16	True	AATAAA	-17	NA	20188217	20218247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
m54284U_201016_223608/54987456/ccs	chr16	-	1062	4	NIC	ENSMUSG00000039568.7	novel	1851	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	161.605142932464	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCAGGCTCTGTAGT	169	False	NA	-11	True	NA	NA	NA	4697669	4692651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4692962_4693230_4693734_4694225_4694286_4697480
m54284U_201016_223608/5505274/ccs	chr17	+	4678	12	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-94	-804	intron_retention	TRUE	canonical	3	392	junction_3	52.2185489984558	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCTGTCTCAA	NA	False	NA	22	True	TATAAA	-16	NA	56347344	56375028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56372426_56374406
m54284U_201016_223608/55115821/ccs	chr7	+	1994	6	NNC	ENSMUSG00000045411.17	novel	3336	5	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	293.138465575571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896357	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896472_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201016_223608/55117605/ccs	chr1	+	1533	10	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	0	-163	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	26.6333124739176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	AATAAA	-23	NA	9618316	9646963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_9618377_9623542_9623698_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
m54284U_201016_223608/55184150/ccs	chr6	-	203	1	Intergenic	novelGene_3425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTAAGTGGTCACTAA	NA	False	NA	NA	False	NA	NA	NA	114842225	114842022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_114842000_114842200
m54284U_201016_223608/55378069/ccs	chr2	+	230	1	Intergenic	novelGene_991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTCATGAGCAATGAAA	NA	False	NA	NA	False	NA	NA	NA	115942527	115942757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_115942500_115942800
m54284U_201016_223608/55509985/ccs	chr17	+	2413	6	ISM	ENSMUSG00000003279.18	ENSMUST00000133717.9	2445	11	239114	-856	-47903	0	3prime_fragment	FALSE	canonical	2	6	junction_2	1.62480768092719	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGACACGCTGCCTCATT	4059	False	NA	NA	False	AATAAA	-20	NA	71068163	71126396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188_71122342_71125019
m54284U_201016_223608/55576882/ccs	chr11	-	2045	11	NNC	ENSMUSG00000010122.15	novel	2987	18	NA	NA	2049	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	8.3282651254628	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGGCTGTAGATTATT	NA	False	NA	-2	True	ATTAAA	-17	NA	61254429	61234227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_61235355_61239484_61239558_61240270_61240366_61243487_61243621_61243891_61243962_61250177_61250254_61250345_61250455_61253512_61253581_61253652_61253767_61253848_61253947_61254347
m54284U_201016_223608/55641841/ccs	chr5	-	180	1	Intergenic	novelGene_2811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACTGGTTTCTAATTCA	NA	False	NA	NA	False	NA	NA	NA	115836919	115836739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115836700_115836900
m54284U_201016_223608/55642186/ccs	chr12	-	2425	25	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	0	-2324	combination_of_known_splicesites	FALSE	canonical	3	94	junction_3	428.838223835308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGTCTTCTTTTAAA	NA	False	NA	-1	True	AATAAA	-24	NA	13299164	13269297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
m54284U_201016_223608/55707467/ccs	chr1	+	2156	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	614.893580675189	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724161	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731710_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
m54284U_201016_223608/5572329/ccs	chr5	+	2419	4	NIC	ENSMUSG00000029195.11	novel	3540	5	NA	NA	23496	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	56.6058497173413	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529246	65541350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_65529554_65533022_65533292_65536270_65537415_65540651
m54284U_201016_223608/5572363/ccs	chr11	-	173	1	Intergenic	novelGene_6146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTAGATTTGT	NA	False	NA	NA	False	NA	NA	NA	85214556	85214383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_85214400_85214600
m54284U_201016_223608/55772243/ccs	chr8	+	2158	9	NIC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_5	5.50993421013355	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGCGTGTTGGGA	4281	False	NA	7	True	AATAAA	-12	NA	120339485	120343663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120343269_120343352
m54284U_201016_223608/55837157/ccs	chr2	+	210	1	Intergenic	novelGene_784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAGACAAAACTGCATTT	NA	False	NA	NA	False	NA	NA	NA	44207776	44207986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_44207800_44208000
m54284U_201016_223608/55837754/ccs	chr11	+	3796	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	236.611645964262	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746294
m54284U_201016_223608/55902388/ccs	chrX	+	3363	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_5	151.634892079191	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
m54284U_201016_223608/56033315/ccs	chr1	+	2019	7	NIC	ENSMUSG00000026240.13	novel	5383	8	NA	NA	0	-61	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	132.540140670247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTCAATATTTGTTA	6041	False	NA	32	True	AATACA	-22	NA	86510659	86533987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
m54284U_201016_223608/56035420/ccs	chr8	+	2228	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	299.962074425668	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAGACATTTTAAATTA	NA	False	NA	12	True	AATAAA	-17	NA	107620282	107649720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_107620341_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
m54284U_201016_223608/56101513/ccs	chr4	+	3709	4	NNC	ENSMUSG00000045071.15	novel	10856	4	NA	NA	0	1263	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	38.1313519298752	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGTCTTTAAATTAGTT	-11	True	NA	16	True	ATTAAA	-23	NA	59626210	59754302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_59626492_59690143_59691339_59737561_59737735_59752242
m54284U_201016_223608/56164830/ccs	chr9	+	2193	11	NNC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	5288.78123956739	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1872	False	NA	20	True	AATAAA	-20	NA	59563858	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_59563902_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201016_223608/56296758/ccs	chr14	+	2669	4	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	0	-147680	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	75.7011668778406	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTTTAAGTTTTTAT	NA	False	NA	NA	False	AATAAA	-8	NA	13803532	13819672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13817450
m54284U_201016_223608/56297556/ccs	chr11	-	3133	17	NIC	ENSMUSG00000020918.15	novel	3046	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_9	107.749111800284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6779	False	NA	-1	True	AATAAA	-18	NA	100603291	100595571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
m54284U_201016_223608/56298193/ccs	chr2	-	178	1	FSM	ENSMUSG00000103532.2	ENSMUST00000193902.2	1041	1	863	0	863	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTCTCAGT	NA	False	NA	NA	False	NA	NA	NA	129038183	129038005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_129038000_129038200
m54284U_201016_223608/5636376/ccs	chr11	-	174	1	ISM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	6630	15	5997	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCTTTAAAATATCT	6588	False	NA	NA	False	NA	NA	NA	95959866	95959692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_95959700_95959900
m54284U_201016_223608/5637997/ccs	chr13	-	200	1	Intergenic	novelGene_7201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATAAACCAGCCCCAG	NA	False	NA	NA	False	NA	NA	NA	70842892	70842692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_70842700_70842900
m54284U_201016_223608/56493498/ccs	chrX	+	1043	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	0	615	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_3	26.8048503073604	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTCATTGTGTTTGT	NA	False	NA	10	True	NA	NA	NA	20828352	20853591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852228_20852400_20853321
m54284U_201016_223608/56558946/ccs	chr8	+	3875	29	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_28	12.9998037661798	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGATGTGCTGCTTT	NA	False	NA	10	True	AATAAA	-17	NA	12807068	12912205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911911
m54284U_201016_223608/56623807/ccs	chr16	+	2923	16	NIC	ENSMUSG00000043065.13	novel	4627	18	NA	NA	0	87	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.8355505958204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACGTGATACTTTTT	6401	False	NA	11	True	AATAAA	-16	NA	44167776	44207593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_44167870_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
m54284U_201016_223608/56755688/ccs	chr10	+	4438	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_13	68.3928183364306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGGATTCTTTGGCTT	NA	False	NA	20	True	AATAAA	-29	NA	128139203	128157227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
m54284U_201016_223608/56820471/ccs	chr2	+	5434	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_19	24.1549275783594	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135501473	135856513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_135501651_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
m54284U_201016_223608/56822577/ccs	chr2	+	4567	7	NNC	ENSMUSG00000040007.9	novel	662	2	NA	NA	-217	0	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_1	14.9182960004002	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATTTTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-32	NA	118730640	118755009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_118730928_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752085_118752178_118752863
m54284U_201016_223608/56886981/ccs	chr14	+	4226	10	NIC	ENSMUSG00000034522.11	novel	4229	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_1	16.9297750708808	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGTGTGTGCCTCTCTAC	NA	False	NA	NA	False	AATAAA	-17	NA	65596124	65636379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_65596205_65622847_65623110_65623775_65624009_65626238_65626349_65628735_65628966_65629503_65629605_65630368_65630670_65632204_65632298_65633303_65633408_65633667
m54284U_201016_223608/56887103/ccs	chr17	-	5824	20	NIC	ENSMUSG00000024002.19	novel	5957	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	68.0204059328427	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503696	32415247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390_32448710_32503491
m54284U_201016_223608/56887587/ccs	chr7	+	2456	15	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	157.585885232434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428093	49508013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498484_49498573_49507114
m54284U_201016_223608/56952102/ccs	chr6	+	2431	19	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_17	81.7724183026387	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	1976	False	NA	13	True	AATAAA	-14	NA	113214811	113258157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254791_113254907_113257563
m54284U_201016_223608/5703857/ccs	chr4	-	3097	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	684	junction_4	53.8171350377242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
m54284U_201016_223608/57084737/ccs	chr11	+	225	1	Intergenic	novelGene_5738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCATTTCATACATG	NA	False	NA	NA	False	NA	NA	NA	23252609	23252834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_23252600_23252800
m54284U_201016_223608/57278632/ccs	chr4	-	2653	13	NIC	ENSMUSG00000028538.13	novel	2225	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	23.5914297056273	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCCTCCTGTTGTTTTC	1862	False	NA	-5	True	AATAAA	-14	NA	117992111	117789354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991586
m54284U_201016_223608/57281363/ccs	chr2	+	1377	6	NIC	ENSMUSG00000037514.19	novel	1398	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	215.37817902471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGGAGGTCATCTTT	864	False	NA	13	True	NA	NA	NA	131104414	131138611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_131104736_131115830_131116041_131124511_131124689_131129393_131129518_131135318_131135445_131138192
m54284U_201016_223608/57607347/ccs	chr5	+	172	1	Intergenic	novelGene_2685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTTTTTACAAA	805	False	NA	NA	False	NA	NA	NA	96998526	96998698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_96998500_96998700
m54284U_201016_223608/57672324/ccs	chr15	-	694	5	NNC	ENSMUSG00000022205.16	novel	3372	5	NA	NA	0	66	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_4	3424.13773817585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTACCCTTTTTTGAT	855	False	NA	79	True	AATAAA	-22	NA	11996098	11984060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996032
m54284U_201016_223608/57673561/ccs	chr11	-	3391	12	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-97	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	27.2178235234813	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTCGCTGTCTTATTTCC	NA	False	NA	-1	True	ATTAAA	-19	NA	78588296	78457993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_78458569_78459718_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78474148_78474251_78477694_78477905_78480130_78480217_78481708_78481816_78509100_78509157_78517402_78517533_78586634
m54284U_201016_223608/57673678/ccs	chr19	+	3307	11	NIC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	241.797518597689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160302	10174238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10160629_10162290_10162402_10163048_10163247_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
m54284U_201016_223608/57674052/ccs	chr4	-	3444	7	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	0	93	intron_retention	FALSE	canonical	3	431	junction_1	26.7810048770061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGATTCAATTTGTGGC	8500	False	NA	-6	True	ATTAAA	-19	NA	140805653	140794564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_140794924_140795505_140795591_140797366_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
m54284U_201016_223608/57870564/ccs	chr6	-	4804	28	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_18	130.557000254681	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71609889	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
m54284U_201016_223608/57870967/ccs	chr11	+	190	1	Intergenic	novelGene_6029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATCCCTAAGAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	76068608	76068798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76068600_76068800
m54284U_201016_223608/58001696/ccs	chr10	+	2960	13	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	21.2053452380919	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977715	118004902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
m54284U_201016_223608/58130514/ccs	chr7	-	1457	9	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	212	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	396.88718485232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569717	46539121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
m54284U_201016_223608/58131908/ccs	chr4	+	2285	15	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	0	136	intron_retention	FALSE	canonical	3	774	junction_2	72.5354241395336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972567_155972640_155972784_155972852_155972983_155973076
m54284U_201016_223608/58197549/ccs	chr9	+	2341	6	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	102.024702891016	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	395	False	NA	NA	False	TTTAAA	-7	NA	37400614	37435446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_37401130_37402751_37402866_37424909_37425000_37428668_37428769_37430022_37430084_37433985
m54284U_201016_223608/58329477/ccs	chr5	+	1060	4	NNC	ENSMUSG00000029178.15	novel	4016	3	NA	NA	-5454	153	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	332.404372213524	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCTTCTGGTTTTTTAT	NA	False	NA	NA	False	ACTAAA	-23	NA	64955276	64980605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_64955374_64974078_64974174_64979216_64979701_64980221
m54284U_201016_223608/5833894/ccs	chr11	+	2100	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	235.082307624425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455350	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115455429_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
m54284U_201016_223608/5834864/ccs	chr5	-	3881	4	Genic_Genomic	ENSMUSG00000105044.2	novel	645	1	NA	NA	-10885	1495	multi-exon	FALSE	canonical	3	110	junction_1	60.4997704311531	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTGTGCTCAACAATTA	NA	False	NA	-3	True	NA	NA	NA	109992896	109979871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_-_109983468_109984614_109984676_109984863_109984991_109992799
m54284U_201016_223608/58394999/ccs	chr10	+	8382	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_26	93.9192214249097	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932760	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
m54284U_201016_223608/58460950/ccs	chr2	-	178	1	Intergenic	novelGene_778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	38966948	38966770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_38966800_38966900
m54284U_201016_223608/58589294/ccs	chr16	+	2002	10	NIC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	-136	intron_retention	FALSE	canonical	3	142	junction_4	840.981040874948	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGGGCCCGCAGAG	1394	False	NA	NA	False	AATAAA	-26	NA	20354268	20362670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
m54284U_201016_223608/58590810/ccs	chr8	-	1311	8	NNC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	856.027846199753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580923	112495122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_112495420_112498511_112498645_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
m54284U_201016_223608/58655130/ccs	chr1	+	3331	14	NIC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	343.313233551171	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406742	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_93406791_93407185_93407322_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
m54284U_201016_223608/58656042/ccs	chr14	+	1581	1	Intergenic	novelGene_7392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCTGACTGCGTGTT	8578	False	NA	12	True	AAAAAG	-37	NA	34101109	34102690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_34101100_34102700
m54284U_201016_223608/58720513/ccs	chr11	+	4051	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	0	94	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	175.708169834944	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTGCTAAGTAATGTCA	NA	False	NA	-15	True	AATAAA	-25	NA	32592783	32696663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_32592936_32602747_32602905_32630200_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
m54284U_201016_223608/58720875/ccs	chrX	+	5341	8	NIC	ENSMUSG00000025630.9	novel	1289	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2155	junction_4	132.973681606549	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCACTTTTTGAATTCTTT	NA	False	NA	12	True	AATAAA	-16	NA	52077013	52110536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52105307_52108981_52109029_52109199_52109277_52109943
m54284U_201016_223608/58722044/ccs	chr7	-	2781	6	NIC	ENSMUSG00000053985.11	novel	2835	5	NA	NA	0	-155	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	3.65513337649941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCTGCATTTATAAACC	NA	False	NA	NA	False	AATAAA	-21	NA	29750798	29736470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29749864_29749929_29750769
m54284U_201016_223608/58786132/ccs	chr11	-	1625	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	130.186298135488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734181	116728257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116728590_116729815_116729955_116730663_116730753_116731273_116731372_116731894_116732182_116733157_116733547_116733890
m54284U_201016_223608/58786251/ccs	chr13	+	2844	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	70.6745278646337	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619208	97633515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_97619286_97619456_97619541_97629663_97629744_97630912
m54284U_201016_223608/58853024/ccs	chr8	-	198	1	Intergenic	novelGene_4394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAACCTGTGAGACAAAA	2398	False	NA	NA	False	NA	NA	NA	88633759	88633561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_88633600_88633800
m54284U_201016_223608/58916919/ccs	chr3	+	708	6	NNC	ENSMUSG00000038374.11	novel	2608	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	1697.12573488236	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539006
m54284U_201016_223608/58918439/ccs	chr10	+	601	4	NNC	ENSMUSG00000049422.8	novel	1488	5	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	canonical	3	841	junction_2	7249.94865882204	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTGCCCATTTA	7273	False	NA	23	True	ATTAAA	-20	NA	75771733	75773581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_75771839_75772071_75772280_75773173_75773289_75773408
m54284U_201016_223608/58984335/ccs	chr6	-	884	2	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTAGTGTAATTGGATTC	NA	False	NA	-15	True	AGTAAA	-18	NA	47167374	47161135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_47161996_47167350
m54284U_201016_223608/5900326/ccs	chr5	+	2883	8	NNC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1021.63404526718	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493733	34510780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_34493829_34499865_34500024_34504120_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
m54284U_201016_223608/5900460/ccs	chr3	+	2557	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	74	junction_19	396.655791807601	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGTAAAGGATTCAT	NA	False	NA	43	True	AATAAA	-33	NA	151916118	151938426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151937891
m54284U_201016_223608/59049299/ccs	chr15	-	1783	5	NNC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	942	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	281.684553179616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTTGCTTGCTTGCTT	NA	False	NA	-4	True	NA	NA	NA	97065125	97057871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_97059277_97059835_97059964_97063982_97064057_97064383_97064492_97065057
m54284U_201016_223608/59050162/ccs	chr6	-	2870	10	NIC	ENSMUSG00000040234.17	novel	3241	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	281.457230924178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAATGTCCTCCTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	146535996	146503849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146527593_146527749_146535883
m54284U_201016_223608/59115710/ccs	chr19	+	4050	3	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	7394989	7403269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_7395283_7397431_7397927_7400007
m54284U_201016_223608/59245580/ccs	chr18	-	5155	9	NIC	ENSMUSG00000024477.5	novel	1278	10	NA	NA	0	-2163	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.5308524460071	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGGTAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	46413897	46370580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407652_46407776_46413746
m54284U_201016_223608/59377786/ccs	chr3	+	4924	7	NIC	ENSMUSG00000078578.10	novel	787	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	870	junction_1	671.973213751858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144514	135171819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135164637_135165735_135165842_135168710_135168805_135170955
m54284U_201016_223608/59442899/ccs	chr14	-	1585	6	NIC	ENSMUSG00000037722.9	novel	2788	6	NA	NA	-64	703	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	472.830371274943	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	-1	True	ATTAAA	-30	NA	45626314	45614907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_45615944_45618393_45618474_45619012_45619141_45620850_45620914_45622037_45622206_45626204
m54284U_201016_223608/59443060/ccs	chr11	+	2060	4	NIC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	275	junction_3	562.44999777758	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCATGGTTGTCCTTTT	6602	False	NA	21	True	AATAAA	-15	NA	87938550	87942316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87938859_87939315_87939501_87939868_87940922_87941802
m54284U_201016_223608/59443971/ccs	chr12	-	175	1	Intergenic	novelGene_6854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101046448	101046273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_101046300_101046400
m54284U_201016_223608/59509232/ccs	chr2	-	3096	1	Antisense	novelGene_ENSMUSG00000026662.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTCCCGGTGGCGGCG	NA	False	NA	NA	False	NA	NA	NA	4889649	4886553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_4886600_4889600
m54284U_201016_223608/59573812/ccs	chr3	-	3340	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	-86	1330	combination_of_known_splicesites	TRUE	canonical	3	44	junction_2	35.7070264168999	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCTTTGCTCATTGGTT	NA	False	NA	-20	True	AATAAA	-2	NA	19365572	19280218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_19282006_19283851_19283933_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
m54284U_201016_223608/59573883/ccs	chr2	+	4967	23	NNC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	58.9791425522476	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4559	False	NA	12	True	AATAAA	-16	NA	18069363	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_18069548_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201016_223608/59573909/ccs	chr19	-	3481	25	NIC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	93	junction_7	96.5628753139056	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAAAGATTGGTTAT	NA	False	NA	-8	True	AATAAA	-17	NA	23251261	23186098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
m54284U_201016_223608/59637775/ccs	chr15	+	4241	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	379	junction_6	56.0576687191166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761750	78778785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
m54284U_201016_223608/59638145/ccs	chr5	-	2167	1	Intergenic	novelGene_2543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33977954	33975787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_33975800_33978000
m54284U_201016_223608/5965289/ccs	chr19	-	3268	1	Antisense	novelGene_ENSMUSG00000024683.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTGTATTTTTCTT	6637	False	NA	NA	False	NA	NA	NA	11752389	11749121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_-_11749100_11752400
m54284U_201016_223608/5965942/ccs	chr9	+	2057	10	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	158.927734179274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8647	False	NA	21	True	GATAAA	-13	NA	21176601	21185041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21177014_21177888_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
m54284U_201016_223608/59704625/ccs	chrX	+	4055	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_17	271.280995829462	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201016_223608/59769155/ccs	chr19	-	4549	23	NIC	ENSMUSG00000024812.12	novel	4728	24	NA	NA	70	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_22	110.720443139131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAAATGTGTGTATGA	NA	False	NA	NA	False	ATTAAA	-16	NA	24202320	24071868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_24072955_24073947_24074034_24075364_24075680_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24202214
m54284U_201016_223608/59770815/ccs	chr17	+	3084	12	NIC	ENSMUSG00000023921.10	novel	3674	13	NA	NA	0	-341	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	101.484681089649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCTGAAGAACTCTTGT	NA	False	NA	3	True	AATAAA	-4	NA	41245575	41272538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
m54284U_201016_223608/59771696/ccs	chr1	-	3313	9	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	87	junction_7	17.1386806668425	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5189	False	NA	-15	True	AGTAAA	-16	NA	171108760	171104564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
m54284U_201016_223608/59967288/ccs	chr12	-	958	3	NIC	ENSMUSG00000021242.10	novel	3299	4	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	11	junction_1	1419.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGCTTGGTTTTGTTTTT	NA	False	NA	-27	True	ATTAAA	-17	NA	84819688	84803265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_84803987_84812050_84812159_84819559
m54284U_201016_223608/60031529/ccs	chr11	-	202	1	Intergenic	novelGene_6447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAAGAGTGAATTTTGT	5858	False	NA	NA	False	NA	NA	NA	115060843	115060641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115060600_115060800
m54284U_201016_223608/60032311/ccs	chr1	-	3734	24	NIC	ENSMUSG00000026335.17	novel	4095	26	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	5.92422216983633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCAGAGTGTATTTTTG	NA	False	NA	-6	True	AATAAA	-18	NA	98023357	97748818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_97749714_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
m54284U_201016_223608/60097414/ccs	chr11	+	1129	9	NNC	ENSMUSG00000020407.14	novel	430	5	NA	NA	206	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	933.045676467664	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068992	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_9069021_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
m54284U_201016_223608/60098384/ccs	chr9	+	2025	15	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_11	187.642422099664	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904139	86959434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86940977_86941129_86941417_86941505_86948701_86948867_86958880
m54284U_201016_223608/60099407/ccs	chr11	-	2695	8	NNC	ENSMUSG00000057286.7	novel	3643	9	NA	NA	0	-814	intron_retention	TRUE	canonical	3	10	junction_3	7.67184090405574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTTTTCCACATTTCCA	NA	False	NA	2	True	AATAAA	-21	NA	116585435	116567528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_116568508_116569291_116569392_116570732_116570916_116572684_116572789_116575171_116576092_116576661_116576837_116581137_116581199_116585262
m54284U_201016_223608/60164064/ccs	chr17	+	241	1	Intergenic	novelGene_8574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTATTTCATGTC	NA	False	NA	NA	False	TATAAA	-15	NA	36186531	36186772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_36186500_36186800
m54284U_201016_223608/60227786/ccs	chr13	+	4194	1	Genic_Genomic	ENSMUSG00000078952.10	novel	NA	NA	NA	NA	11671	1812	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGTTTTGTTGTTGTTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	97631133	97635327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_+_97631100_97635300
m54284U_201016_223608/60227924/ccs	chr8	-	1694	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	0	1983	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	107.929493236113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGAGCTGAATGACCGGT	NA	False	NA	-20	True	AATAAA	-15	NA	122305529	122278754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122305196
m54284U_201016_223608/60228790/ccs	chrX	+	2322	11	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_1	1083.29227819642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
m54284U_201016_223608/60229275/ccs	chr1	-	9812	18	NIC	ENSMUSG00000026605.15	novel	11130	18	NA	NA	0	823	combination_of_known_junctions	FALSE	canonical	3	9	junction_12	65.9448233236195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTCTTTGAATGTGTG	NA	False	NA	58	True	AGTAAA	-18	NA	189420283	189374069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412468_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
m54284U_201016_223608/60229444/ccs	chr2	+	1944	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1876	junction_8	241.9110580358	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
m54284U_201016_223608/60295487/ccs	chr8	-	1144	9	NNC	ENSMUSG00000003657.10	novel	1431	11	NA	NA	15140	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_8	57.2319840648566	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCACCCGTTTCTTGTCG	NA	False	NA	-12	True	AATAAA	-22	NA	110879698	110869169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_110869833_110872283_110872356_110873932_110873987_110874246_110874287_110874674_110874731_110875145_110875224_110875987_110876045_110879261_110879343_110879655
m54284U_201016_223608/6030482/ccs	chr8	-	1681	5	NNC	ENSMUSG00000037300.20	novel	2409	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	180.045133230532	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTCTAAAGTCATTTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	125448722	125434719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_125435912_125436641_125436713_125439355_125439432_125440927_125441023_125448475
m54284U_201016_223608/60360357/ccs	chr5	-	4257	32	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_24	96.4058689669873	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	621	False	NA	-3	True	AATAAA	-31	NA	134343614	134266687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
m54284U_201016_223608/60360376/ccs	chr3	-	3146	3	NIC	ENSMUSG00000034317.15	novel	2939	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGACATAGTTTTCTTA	NA	False	NA	-6	True	AATAAA	-26	NA	68952088	68942620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_68945342_68951100_68951176_68951738
m54284U_201016_223608/60360858/ccs	chr2	+	1237	5	NNC	ENSMUSG00000069020.10	novel	681	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	137.995244483279	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTTTACTAGCCTTGCT	NA	False	NA	14	True	AATAAA	-16	NA	29717372	29734076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_29717448_29722705_29722775_29731413_29731496_29732732_29732782_29733114
m54284U_201016_223608/60492594/ccs	chr11	+	5646	6	NNC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	0	-1001	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	40.4257343779924	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCTATGACTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	87959104	87974554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87970159
m54284U_201016_223608/60556392/ccs	chr2	+	6130	13	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	190	junction_9	22.0749984270793	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTCTGATTTTGTTT	4692	False	NA	27	True	ATTAAA	-29	NA	14078918	14152351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
m54284U_201016_223608/60557719/ccs	chr11	-	205	1	Intergenic	novelGene_5723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGTAGTTATTTTCTT	NA	False	NA	NA	False	AAAACA	-16	NA	20680850	20680645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_20680600_20680800
m54284U_201016_223608/60558089/ccs	chr1	+	168	1	Intergenic	novelGene_315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTTAAAAATGTAAAAA	NA	False	NA	NA	False	NA	NA	NA	132397590	132397758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_132397600_132397800
m54284U_201016_223608/60621434/ccs	chr12	+	197	1	Intergenic	novelGene_6824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCCCTATCCCTGCTT	NA	False	NA	NA	False	NA	NA	NA	87100362	87100559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_87100400_87100600
m54284U_201016_223608/60687450/ccs	chr8	-	183	1	Intergenic	novelGene_4614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATATAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	127755325	127755142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_127755100_127755300
m54284U_201016_223608/60689127/ccs	chr11	+	1182	9	NIC	ENSMUSG00000020407.14	novel	518	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	905.183821110386	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068786	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_9068868_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
m54284U_201016_223608/60689235/ccs	chr10	+	1625	11	Intergenic	novelGene_5575	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_8	31.0845620847391	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTGGTAATGAGAGAGAA	NA	False	NA	31	True	AATAAA	-31	NA	120359230	120374537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_120359328_120359405_120359477_120360126_120360189_120363521_120363638_120364338_120364520_120369971_120370079_120370224_120370312_120372451_120372613_120373440_120373621_120373690_120373794_120374077
m54284U_201016_223608/60752015/ccs	chr3	+	2779	14	NIC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	124.465912255563	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	8	True	NA	13	True	AATAAA	-14	NA	88593109	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88616249_88617164_88617250_88618067_88618160_88618936
m54284U_201016_223608/60753478/ccs	chr1	-	189	1	Intergenic	novelGene_214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACATTAATTTTCTCATT	NA	False	NA	NA	False	NA	NA	NA	83500865	83500676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_83500700_83500900
m54284U_201016_223608/60754080/ccs	chr5	+	3987	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	63.7318601642852	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	NA	False	NA	9	True	AATAAA	-21	NA	37025856	37112422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_37026235_37080311_37080410_37083628_37083795_37084874_37084988_37088680_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
m54284U_201016_223608/60883217/ccs	chr15	-	2192	3	NIC	ENSMUSG00000075511.10	novel	2270	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCCAGCTTAAGTCTCT	245	False	NA	NA	False	AATAAA	-20	NA	83251483	83241734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_83243152_83249229_83249712_83251190
m54284U_201016_223608/60884914/ccs	chr4	-	2408	10	NNC	ENSMUSG00000066151.13	novel	3279	18	NA	NA	17635	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	34.5643075733435	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTGTTCCTTTTTGGG	NA	False	NA	-1	True	NA	NA	NA	62232896	62218578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62232796
m54284U_201016_223608/60948844/ccs	chr2	+	5536	17	NIC	ENSMUSG00000026883.18	novel	6649	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	76.7872212269073	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	8466	False	NA	11	True	ATTAAA	-21	NA	35511992	35621006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
m54284U_201016_223608/60950061/ccs	chr14	+	2305	14	NNC	ENSMUSG00000015971.6	novel	2328	14	NA	NA	0	-1253	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_13	85.8768900035766	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGCTACTTACCGGAT	NA	False	NA	6	True	ATTAAA	-19	NA	29700361	29716571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917_29715103_29716243
m54284U_201016_223608/60950501/ccs	chr9	+	10425	42	NNC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	52	-1667	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_25	14.6749431337428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGGATTTTTTAATC	607	False	NA	NA	False	AATAAA	-32	NA	59658230	59834482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782481_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
m54284U_201016_223608/60950616/ccs	chr8	-	191	1	Intergenic	novelGene_4364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACTGGGATTAACTA	9483	False	NA	NA	False	NA	NA	NA	84712320	84712129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_84712100_84712300
m54284U_201016_223608/6097745/ccs	chr4	+	888	1	ISM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	84832	0	19478	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTTTTCTCCTTTGTCTTT	NA	False	NA	21	True	AATAAA	-17	NA	132451188	132452076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_132451200_132452100
m54284U_201016_223608/61082051/ccs	chr6	-	2522	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	210.928584522333	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
m54284U_201016_223608/61082447/ccs	chr17	-	327	1	Intergenic	novelGene_8605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGGAGTATTTTCTT	NA	False	NA	NA	False	NA	NA	NA	45925601	45925274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_45925300_45925600
m54284U_201016_223608/61210866/ccs	chr16	-	3879	21	NIC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	159	junction_7	37.4113619105213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201016_223608/61212220/ccs	chr7	-	1865	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1616	junction_4	181.074024832762	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765080	79744593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
m54284U_201016_223608/61343006/ccs	chr15	-	3138	3	NIC	ENSMUSG00000037465.11	novel	3044	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	2013	junction_1	150	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGAGTCTGTTGTATG	NA	False	NA	-7	True	AATAAA	-18	NA	38300950	38294656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_38296409_38296858_38298097_38300802
m54284U_201016_223608/61408786/ccs	chr7	-	2126	8	NIC	ENSMUSG00000070426.13	novel	2249	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	128.061050491792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGACACGCATTTGC	NA	False	NA	-15	True	AATAAA	-19	NA	101714365	101668358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101684513_101684669_101688756_101688899_101691833_101691872_101714272
m54284U_201016_223608/61474753/ccs	chr4	-	183	1	Intergenic	novelGene_1923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGTGTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	86103480	86103297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_86103300_86103500
m54284U_201016_223608/61538600/ccs	chr7	-	3191	6	NIC	ENSMUSG00000030772.7	novel	3359	8	NA	NA	631	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	21.3971960779912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATGGTATGGGTCCATT	NA	False	NA	-1	True	AATAAA	-23	NA	111757633	111715223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111749817_111749956_111757389
m54284U_201016_223608/61539795/ccs	chr19	-	156	1	Intergenic	novelGene_9104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	5693858	5693702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5693700_5693900
m54284U_201016_223608/61540538/ccs	chr13	+	913	6	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	91.9469412215545	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTTGTCTTTTTTTTC	NA	False	NA	NA	False	AATACA	-15	NA	55357594	55388660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
m54284U_201016_223608/61605186/ccs	chr9	+	3300	20	NIC	ENSMUSG00000032212.11	novel	3755	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	70.7250930092244	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTAATGTATTGAGAAC	NA	False	NA	17	True	AATAAA	-18	NA	70450075	70499516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
m54284U_201016_223608/61605793/ccs	chr4	-	4503	5	NIC	ENSMUSG00000040520.8	novel	4867	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	25.7815340893439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAATCTATTCATTGTT	0	True	NA	-4	True	AATAAA	-25	NA	26346891	26324505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340635_26346596
m54284U_201016_223608/61605996/ccs	chr8	+	4099	10	NIC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	838	junction_7	55.0059480509849	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063814	72077555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72075941_72076136
m54284U_201016_223608/6161244/ccs	chr6	+	177	1	Intergenic	novelGene_3587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTGCAGAGTAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	148880605	148880782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_148880600_148880800
m54284U_201016_223608/61670799/ccs	chr15	-	3768	17	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	0	-418	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	18.6906351885108	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419135	102407877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102416762_102416899_102417724_102417814_102418353_102418441_102419018
m54284U_201016_223608/61735107/ccs	chr15	+	182	1	Intergenic	novelGene_7839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAAGAAAAGAAAGGA	NA	False	NA	NA	False	NA	NA	NA	81343614	81343796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81343600_81343800
m54284U_201016_223608/61736835/ccs	chr1	-	3692	6	NIC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	0	3236	intron_retention	FALSE	canonical	3	2151	junction_4	152.774867042979	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACCCTTGATACTTG	NA	False	NA	-12	True	ATTAAA	-13	NA	13730770	13696982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_13697129_13697579_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
m54284U_201016_223608/61737547/ccs	chr11	+	2299	13	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	173.891309443572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATCTGATTTGTTGCGC	4334	False	NA	17	True	AATAAA	-19	NA	102321343	102327635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102321529_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
m54284U_201016_223608/61933001/ccs	chr4	+	3881	4	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3824	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	187.21289129402	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145401078	145431011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_145401211_145422720_145422806_145425813_145425941_145427474
m54284U_201016_223608/61997784/ccs	chr1	+	1384	7	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_5	75.900519687871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187513	75190886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75190219_75190342_75190457
m54284U_201016_223608/61998621/ccs	chr10	+	5607	14	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	352.227115407662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGGTCTCTGTTTGCCT	2793	False	NA	16	True	AATAAA	-17	NA	20188217	20218247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
m54284U_201016_223608/62064422/ccs	chr15	-	6478	19	NIC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_10	47.9875562573836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCTGGACTCAATACTAT	6143	False	NA	2	True	AATAAA	-36	NA	97991450	97936624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97959830_97959909_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
m54284U_201016_223608/62065251/ccs	chr6	-	3007	18	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	95	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_11	245.930392154909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8239	False	NA	-28	True	AATAAA	-15	NA	115653501	115595557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
m54284U_201016_223608/62129354/ccs	chr11	-	223	2	Intergenic	novelGene_6450	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	50	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTAACTCTGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	115431544	115400087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115400260_115431493
m54284U_201016_223608/62194739/ccs	chrX	-	1224	7	NIC	ENSMUSG00000031157.11	novel	1104	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	180.072824774373	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGGCTTGAGTGCTTC	565	False	NA	-1	True	AATAAA	-22	NA	7765239	7760757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765018
m54284U_201016_223608/62261927/ccs	chr11	-	2091	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	142.244346396026	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84011907_84012015_84017813_84017922_84020362
m54284U_201016_223608/6228745/ccs	chrX	+	3597	27	NIC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	0	-449	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	890.53387102557	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAAGTATGTCTA	NA	False	NA	72	True	AATAAA	-41	NA	20524659	20548969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20524766_20525438_20525536_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
m54284U_201016_223608/62390318/ccs	chr4	-	1889	10	NIC	ENSMUSG00000028789.17	novel	2063	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	8.90831211236775	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	128856232	128825814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128855155_128855353_128855876_128855998_128856093
m54284U_201016_223608/62456163/ccs	chr2	+	3305	11	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	0	-58	intron_retention	FALSE	canonical	3	1013	junction_9	110.218011232285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172841916	172857474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
m54284U_201016_223608/62456562/ccs	chr11	+	274	1	Intergenic	novelGene_5844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAAGGGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	54734993	54735267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_54735000_54735300
m54284U_201016_223608/62456874/ccs	chr7	-	173	1	Intergenic	novelGene_3949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGTATGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	93314496	93314323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_93314300_93314500
m54284U_201016_223608/62587496/ccs	chr4	-	3110	1	Intergenic	novelGene_1915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAAGCTTCATGTAGGAC	4287	False	NA	NA	False	NA	NA	NA	83280905	83277795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_83277800_83280900
m54284U_201016_223608/62654052/ccs	chr16	-	2765	5	NIC	ENSMUSG00000022656.16	novel	3062	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	101.921538449927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGAGATTTTTGGGGGTT	NA	False	NA	-7	True	ATTAAA	-13	NA	46317330	46267531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_46269332_46274986_46275139_46278476_46278595_46284180_46284523_46316977
m54284U_201016_223608/62654319/ccs	chr1	+	187	1	Intergenic	novelGene_416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATTGGCTAGAGTA	NA	False	NA	NA	False	NA	NA	NA	156706667	156706854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156706700_156706900
m54284U_201016_223608/62654874/ccs	chrX	+	161	1	Intergenic	novelGene_9504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTAAAAAGGAATGTGG	3229	False	NA	NA	False	NA	NA	NA	73120317	73120478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_73120300_73120500
m54284U_201016_223608/62719842/ccs	chr12	-	173	1	Intergenic	novelGene_6636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAGGACAAACATGT	1336	False	NA	NA	False	NA	NA	NA	54458139	54457966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_54458000_54458100
m54284U_201016_223608/62720203/ccs	chr10	-	1537	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_6	328.57143439441	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCATGGCTTGGCGTC	NA	False	NA	-7	True	AATACA	-16	NA	79602744	79594375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598131_79598315_79598380_79598480_79598540_79602586
m54284U_201016_223608/62783919/ccs	chr9	-	3080	11	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	112.525063874676	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
m54284U_201016_223608/62784274/ccs	chrX	+	3750	7	NIC	ENSMUSG00000072966.12	novel	3736	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.6669207311169	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	False	NA	NA	False	AATAAA	-20	NA	134739804	134745475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_134740012_134740531_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
m54284U_201016_223608/62915203/ccs	chr12	-	3625	13	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	24.4108354811729	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	NA	False	NA	-37	True	AATAAA	-14	NA	83968641	83840844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
m54284U_201016_223608/62915725/ccs	chr18	+	2809	21	NIC	ENSMUSG00000024231.16	novel	2799	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	207.334819796386	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	13	True	NA	72	True	ATTAAA	-28	NA	3383256	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414131_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
m54284U_201016_223608/62915738/ccs	chr16	+	3483	17	NIC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_8	254.136989387614	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	False	NA	27	True	AATAAA	-20	NA	13598576	13632703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
m54284U_201016_223608/62981145/ccs	chr2	+	1358	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	303.287714060428	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_5850193_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
m54284U_201016_223608/62981685/ccs	chr10	+	842	2	NNC	ENSMUSG00000020308.8	novel	368	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTTGCTGGTCACCT	8479	False	NA	10	True	AATAAA	-12	NA	79505716	79511960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_79505832_79511233
m54284U_201016_223608/63177105/ccs	chr14	-	5302	20	NIC	ENSMUSG00000021910.16	novel	5559	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	233.809686559573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGTCTTCAAGGTTATA	9422	False	NA	-4	True	AATAAA	-17	NA	30928657	30892886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
m54284U_201016_223608/63309843/ccs	chr9	+	2556	12	NIC	ENSMUSG00000032435.10	novel	2601	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_9	128.648537811324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGGTCAAATAACGTG	2126	False	NA	3	True	AATAAA	-16	NA	114517857	114553370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114549616_114549738_114550772_114550926_114552320
m54284U_201016_223608/63310255/ccs	chr13	-	195	1	Intergenic	novelGene_7004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGCACAGTAGAGCCTT	NA	False	NA	NA	False	NA	NA	NA	28862395	28862200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_28862200_28862400
m54284U_201016_223608/63310487/ccs	chr7	-	828	7	NNC	ENSMUSG00000030744.14	novel	1908	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	119	junction_6	5708.79212754813	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGACTGGATTGTGTCC	8422	False	NA	-34	True	AATAAA	-36	NA	99132858	99128088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131901_99132798
m54284U_201016_223608/63374595/ccs	chr7	+	2075	11	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	0	553	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	93.4751838725124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTCTGGCTGCCCTTT	6825	False	NA	12	True	AATAAA	-17	NA	140711213	140736068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140711431_140715221_140715324_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
m54284U_201016_223608/63438982/ccs	chr15	-	202	1	Intergenic	novelGene_7752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAGTTAGTTTTTCA	8405	False	NA	NA	False	NA	NA	NA	73276361	73276159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_73276200_73276400
m54284U_201016_223608/63441120/ccs	chr3	-	171	1	Intergenic	novelGene_1538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	90193954	90193783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90193800_90194000
m54284U_201016_223608/63506168/ccs	chr12	-	2487	8	NIC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	904	junction_7	87.6938086847222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAATGATTTTAAAAACA	112	False	NA	-21	True	TTTAAA	-18	NA	78908269	78889775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
m54284U_201016_223608/63506506/ccs	chr16	+	161	1	Intergenic	novelGene_8243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATAGAGAAATATCCTA	NA	False	NA	NA	False	NA	NA	NA	35796580	35796741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_35796600_35796700
m54284U_201016_223608/63507083/ccs	chr17	+	175	1	Intergenic	novelGene_8428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	26269737	26269912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_26269700_26269900
m54284U_201016_223608/6357527/ccs	chr4	-	199	1	Intergenic	novelGene_1860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGATATATTTAAGCGGC	NA	False	NA	NA	False	NA	NA	NA	48666546	48666347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_48666300_48666500
m54284U_201016_223608/6358498/ccs	chrX	+	1510	11	NNC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_10	63.2250741399328	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGGGTGGGGCGTGCTT	4039	False	NA	17	True	AATAAA	-30	NA	7588488	7594440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7594049
m54284U_201016_223608/6359784/ccs	chr4	+	2719	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	84	junction_13	71.5348220745028	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-25	True	NA	19	True	AGTAAA	-16	NA	11558921	11615805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11615442
m54284U_201016_223608/63636483/ccs	chr7	-	4558	9	NIC	ENSMUSG00000074272.11	novel	2873	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	9.49259579883184	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCACTTTGTGGGGTTTTC	2848	False	NA	-1	True	AATAAA	-21	NA	25177028	25161131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_25164175_25164273_25164306_25164892_25164946_25165741_25165863_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
m54284U_201016_223608/63701509/ccs	chr9	-	2243	14	NNC	ENSMUSG00000056131.14	novel	2666	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	173.196847341382	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTTTCGATTGCTTACC	NA	False	NA	-2	True	ATTAAA	-20	NA	86453846	86437053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86452640_86452876_86453782
m54284U_201016_223608/63767546/ccs	chr10	+	6778	30	NIC	ENSMUSG00000090112.9	novel	9271	30	NA	NA	0	977	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	19.8640444419897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGATTGTTTTATTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	11025216	11091018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063781_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
m54284U_201016_223608/63900450/ccs	chr3	-	194	1	Intergenic	novelGene_1497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCTTGCTTCTGGATTC	NA	False	NA	NA	False	NA	NA	NA	88623189	88622995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88623000_88623200
m54284U_201016_223608/63963186/ccs	chr2	+	4643	7	NNC	ENSMUSG00000040007.9	novel	4594	7	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	12.1609575646365	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTATTTTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-32	NA	118731875	118755009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752085_118752178_118752863
m54284U_201016_223608/63963197/ccs	chr1	-	3613	15	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	754.011858429999	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669944	181642899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181667264_181667368_181669852
m54284U_201016_223608/64029093/ccs	chr10	-	2049	16	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	619.881114049747	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899668	116886910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891287_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
m54284U_201016_223608/64161259/ccs	chr18	+	2456	16	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	51.8457541388128	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151782	75420035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
m54284U_201016_223608/64226966/ccs	chr7	-	3527	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	281.499038869919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	7024	False	NA	-7	True	NA	NA	NA	126101490	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091620_126091781_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
m54284U_201016_223608/64227539/ccs	chr7	-	3573	27	NNC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_24	283.394950951586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198273	44182172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192068_44192303_44192664_44192861_44198178
m54284U_201016_223608/64291076/ccs	chr5	+	3878	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	574.951383451969	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108228690_108228708_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201016_223608/64356764/ccs	chr9	+	3206	3	NIC	ENSMUSG00000032434.10	novel	3383	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	298.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTGCCTTCACAGTT	NA	False	NA	19	True	AATAAA	-15	NA	114560240	114578412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_114560442_114569126_114569226_114575506
m54284U_201016_223608/64357540/ccs	chr13	+	8212	15	NIC	ENSMUSG00000021318.16	novel	2004	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_10	4.81970868795353	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACTGGATTTCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	15637819	15904611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_15637994_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15834546_15834761_15835465_15835580_15836974_15837116_15888083_15888234_15889534_15889700_15894639_15894931_15898024_15898353_15899045
m54284U_201016_223608/64358519/ccs	chr17	-	177	1	Intergenic	novelGene_8525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAACCACATAACC	4077	False	NA	NA	False	NA	NA	NA	32519996	32519819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_32519800_32520000
m54284U_201016_223608/64555594/ccs	chr12	+	2638	17	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	370.134725260614	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713247	98753107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751547_98751666_98751893_98752001_98752833
m54284U_201016_223608/64620335/ccs	chr8	-	2624	14	NIC	ENSMUSG00000064325.5	novel	9074	13	NA	NA	483	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	3.68910117177901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTGCCCTTTTAAA	4789	False	NA	0	True	ATTAAA	-19	NA	80784152	80692479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_80693058_80699026_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
m54284U_201016_223608/64686701/ccs	chr1	-	268	1	Intergenic	novelGene_504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTTGCCATGTGC	NA	False	NA	NA	False	NA	NA	NA	179476407	179476139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_179476100_179476400
m54284U_201016_223608/64752199/ccs	chr4	+	167	1	Intergenic	novelGene_2283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACATAAAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	138702063	138702230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_138702100_138702200
m54284U_201016_223608/64816701/ccs	chr3	-	173	1	Intergenic	novelGene_1337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	3102114	3101941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_3101900_3102100
m54284U_201016_223608/64817104/ccs	chr4	+	1491	1	Intergenic	novelGene_1886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGACAAAATTAGTAAAG	NA	False	NA	NA	False	NA	NA	NA	59326864	59328355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_59326900_59328400
m54284U_201016_223608/64882948/ccs	chr5	-	2256	6	ISM	ENSMUSG00000066861.15	ENSMUST00000086368.12	1977	7	459	580	459	0	3prime_fragment	FALSE	canonical	3	61	junction_5	127.706851813049	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121025186	121014784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_121015091_121015245_121015273_121016383_121016538_121017162_121017396_121019947_121020133_121023835
m54284U_201016_223608/64883512/ccs	chr3	+	5812	23	NIC	ENSMUSG00000027820.13	novel	3345	23	NA	NA	0	2090	combination_of_known_junctions	FALSE	canonical	3	270	junction_1	51.6275000395194	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63202868	63291134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_63203037_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
m54284U_201016_223608/6490071/ccs	chr7	-	1572	16	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	624.837258812245	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	9182	False	NA	-3	True	TATAAA	-16	NA	45084047	45071320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084043
m54284U_201016_223608/64948106/ccs	chr10	+	1869	5	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	381	junction_2	22.792542640083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGAGTGTTTGCCTG	NA	False	NA	13	True	TTTAAA	-18	NA	126877826	126882234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_126877940_126878928_126879093_126880335_126880739_126880894_126880997_126881147
m54284U_201016_223608/64948130/ccs	chrX	-	1235	4	NIC	ENSMUSG00000031168.15	novel	1743	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	780	junction_2	7.25718035235908	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGAGAGATATTTAATTA	NA	False	NA	-5	True	AATAAA	-17	NA	8059137	8051569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_8052073_8052882_8053159_8056317_8056676_8059039
m54284U_201016_223608/65013744/ccs	chrX	+	8307	45	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	-165	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	216.585567042773	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTGACTGTTAATT	823	False	NA	NA	False	AATAAA	-45	NA	12937752	13035972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
m54284U_201016_223608/65014200/ccs	chr3	+	193	1	Intergenic	novelGene_1691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGACTTTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	134770094	134770287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_134770100_134770300
m54284U_201016_223608/65078704/ccs	chr11	+	4092	18	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	32.2346500579712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	74816648	75055274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74816830_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
m54284U_201016_223608/65143472/ccs	chr1	-	1386	10	NIC	ENSMUSG00000026000.17	novel	4270	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	146.548774167089	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCGAGTTTTTATTTCC	NA	False	NA	-5	True	AATGAA	-16	NA	67078024	67042533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077960
m54284U_201016_223608/65210768/ccs	chr5	-	2390	15	NIC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	170	junction_14	144.727259325383	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185345
m54284U_201016_223608/65275313/ccs	chr3	-	2351	3	NNC	ENSMUSG00000052544.10	novel	416	3	NA	NA	-134272	1899	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	46	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGAGCGTTGTTTTCTCTC	NA	False	NA	-4	True	AATAAA	-24	NA	153065692	152909103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_152911229_152912254_152912363_153065574
m54284U_201016_223608/65340146/ccs	chr14	-	4563	9	NIC	ENSMUSG00000022034.11	novel	2913	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	933	junction_6	64.7721969675261	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCAGTGGCTTG	6430	False	NA	-11	True	ATTAAA	-14	NA	66071357	66056486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
m54284U_201016_223608/65341181/ccs	chr3	-	4159	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	277.185793802125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3507	False	NA	99	True	AAAAAG	-18	NA	89959822	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201016_223608/65406175/ccs	chr11	+	2872	9	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	65	0	intron_retention	FALSE	canonical	3	1074	junction_7	53.5694642497011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1700	False	NA	18	True	ATTAAA	-15	NA	78403083	78413562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78409806_78410005_78410132_78411977_78412058_78412619
m54284U_201016_223608/65406774/ccs	chr1	+	4187	29	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_16	32.5407711296811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10109991	10206993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
m54284U_201016_223608/65407197/ccs	chr1	-	179	1	Intergenic	novelGene_517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAAGAGG	NA	False	NA	NA	False	NA	NA	NA	180742391	180742212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_180742200_180742400
m54284U_201016_223608/65470650/ccs	chr17	-	2060	16	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	126.131148677346	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201016_223608/65471037/ccs	chr9	+	1185	8	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	832	junction_5	84.7158515875517	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914210	20920127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919196_20919789
m54284U_201016_223608/65472446/ccs	chr2	+	1023	11	NNC	ENSMUSG00000027384.7	novel	1166	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	69.9549140518377	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTATGTTTCCCAGAA	NA	False	NA	11	True	AATAAA	-11	NA	140012632	140045552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030656_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
m54284U_201016_223608/65472653/ccs	chr13	+	3185	7	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2855	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_1	63.2334739060114	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35922440	36058046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_35922622_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
m54284U_201016_223608/65473094/ccs	chr8	+	3382	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2092	at_least_one_novel_splicesite	FALSE	canonical	2	99	junction_1	755.304689912074	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760547	111782204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_111760577_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
m54284U_201016_223608/65537964/ccs	chr12	+	3168	11	NIC	ENSMUSG00000021065.17	novel	3358	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	26.8158535198863	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77285586	77522763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
m54284U_201016_223608/65538494/ccs	chr15	+	183	1	Intergenic	novelGene_7983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAAGCCGGGCGTGGTG	1665	False	NA	NA	False	NA	NA	NA	100085894	100086077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_100085900_100086100
m54284U_201016_223608/65601767/ccs	chr12	+	5472	22	NNC	ENSMUSG00000021171.9	novel	5560	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_18	40.103324600224	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTAATATGTTTTTTGTT	NA	False	NA	5	True	AATAAA	-18	NA	116244841	116336711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331389_116331460_116332355_116332462_116333631_116333682_116333790
m54284U_201016_223608/65604355/ccs	chr6	+	2597	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_5	405.973692563021	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201016_223608/65667680/ccs	chr4	+	3295	4	NIC	ENSMUSG00000046862.15	novel	3260	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	75.7011668778406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTCACTTCCTTTG	NA	False	NA	10	True	AATAAA	-17	NA	143139541	143147661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_143139662_143143189_143143523_143143942_143144531_143145407
m54284U_201016_223608/65668345/ccs	chr16	+	2458	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	2	87	junction_14	731.810145385324	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327479_20327570_20327710
m54284U_201016_223608/65668760/ccs	chr11	+	160	1	Intergenic	novelGene_5700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAGGAGGAGGAAAGGT	NA	False	NA	NA	False	NA	NA	NA	8586510	8586670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_8586500_8586700
m54284U_201016_223608/65734914/ccs	chr17	-	195	1	Intergenic	novelGene_8752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTTCTTCAAAGTCAAA	NA	False	NA	NA	False	NA	NA	NA	82824417	82824222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_82824200_82824400
m54284U_201016_223608/65735220/ccs	chr12	+	191	1	Intergenic	novelGene_6598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCTCATGCTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	25071364	25071555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_25071400_25071600
m54284U_201016_223608/65798302/ccs	chr7	+	1290	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	69.7438461918516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014240	30018471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_30014512_30014686_30014826_30015719_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018097_30018157_30018248
m54284U_201016_223608/65865968/ccs	chr7	+	2169	7	NNC	ENSMUSG00000045411.17	novel	2131	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	324.736303278008	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896233_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201016_223608/65866133/ccs	chr7	+	201	1	Intergenic	novelGene_3983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCAGTCTCAGCTGGGCG	NA	False	NA	NA	False	NA	NA	NA	100920138	100920339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_100920100_100920300
m54284U_201016_223608/65929388/ccs	chr12	+	2413	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	190.767502473561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627141
m54284U_201016_223608/65931661/ccs	chr1	-	178	1	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTTACATTTAC	NA	False	NA	NA	False	NA	NA	NA	9900865	9900687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_9900700_9900900
m54284U_201016_223608/65996212/ccs	chr19	+	3786	6	NNC	ENSMUSG00000025010.15	novel	3819	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	8.01498596380555	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTGCTGCTTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	40819722	40837016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
m54284U_201016_223608/66061047/ccs	chr5	+	253	1	Intergenic	novelGene_2549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCGAATTACACATTTCAA	NA	False	NA	NA	False	NA	NA	NA	34521692	34521945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_34521700_34521900
m54284U_201016_223608/66061073/ccs	chr9	+	2338	8	ISM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	292	0	0	0	intron_retention	FALSE	canonical	3	3928	junction_3	5928.96304386443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758
m54284U_201016_223608/66063120/ccs	chrX	+	5173	16	NNC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	-1590	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	120.425283428726	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76553028	76706589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_76553225_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
m54284U_201016_223608/66063161/ccs	chr6	+	2371	20	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-51	0	at_least_one_novel_splicesite	TRUE	canonical	2	62	junction_6	56.8725064900417	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	122	False	NA	NA	False	AATAAA	-22	NA	49372486	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
m54284U_201016_223608/66128707/ccs	chr2	+	1647	12	NNC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	497.726284764482	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691966	69701854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_69692057_69693584_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
m54284U_201016_223608/66324469/ccs	chr4	+	3901	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43735	1183	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.313930820368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	145508071	145557695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_145508210_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
m54284U_201016_223608/66389140/ccs	chr11	+	2457	10	NIC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1895	junction_3	129.307080191513	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
m54284U_201016_223608/66520604/ccs	chr4	+	3331	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	56	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_6	308.421789113545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGGCTGTCATTCTG	4637	False	NA	24	True	AATAAA	-29	NA	155896957	155908816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
m54284U_201016_223608/66586149/ccs	chr1	+	170	1	Intergenic	novelGene_288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTTACTATCCTTTT	NA	False	NA	NA	False	NA	NA	NA	127842050	127842220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_127842000_127842200
m54284U_201016_223608/66586810/ccs	chrX	-	2175	12	NNC	ENSMUSG00000031297.15	novel	2232	12	NA	NA	167	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	409.125251083797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100128791	100122815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128759
m54284U_201016_223608/66587302/ccs	chr10	-	1607	1	FSM	ENSMUSG00000085666.4	ENSMUST00000121229.2	1194	1	-146	-267	-146	267	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTCTCTGAGGAGTC	2316	False	NA	NA	False	AAGAAA	-1	NA	41931448	41929841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_-_41929800_41931400
m54284U_201016_223608/66650913/ccs	chr19	-	2105	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	284	junction_17	297.862756069448	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407225	27367460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404526_27407191
m54284U_201016_223608/66716702/ccs	chr7	-	1985	11	Fusion	ENSMUSG00000030491.17_ENSMUSG00000100068.2	novel	769	6	NA	NA	0	113	multi-exon	FALSE	canonical	3	19	junction_1	140.882362274346	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTGGTTAGTATTT	NA	False	NA	NA	False	NA	NA	NA	35237118	35196766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_-_35197571_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
m54284U_201016_223608/66716837/ccs	chr8	+	2019	8	NIC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	91	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	1013.26761781186	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTGTCCTTCTGTGAC	8293	False	NA	21	True	AATAAA	-22	NA	13209251	13225338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13209435_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
m54284U_201016_223608/66716968/ccs	chr6	+	6407	43	NNC	ENSMUSG00000038759.16	novel	4508	30	NA	NA	123	0	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_1	74.8991347445852	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGTGTGGTCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	35154686	35224531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_35154912_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
m54284U_201016_223608/66717409/ccs	chr2	+	189	1	Intergenic	novelGene_731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAAAGAAGTT	NA	False	NA	NA	False	NA	NA	NA	33268688	33268877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33268700_33268900
m54284U_201016_223608/66718232/ccs	chr4	+	2780	5	NIC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	39.4104998699585	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_147637884_147646898_147646979_147661528_147661587_147665698_147665826_147667290
m54284U_201016_223608/66846769/ccs	chr13	+	2143	6	NIC	ENSMUSG00000074867.5	novel	1560	5	NA	NA	0	487	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	19.2561678430575	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTTATGTGTGGACCA	NA	False	NA	NA	False	NA	NA	NA	62277746	62384445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_62277843_62351245_62351373_62351567_62351629_62381070_62381198_62381382_62381444_62382774
m54284U_201016_223608/66847064/ccs	chr7	+	3120	11	Fusion	ENSMUSG00000100254.2_ENSMUSG00000099481.7	novel	2298	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_1	28.9048438847194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCCGATCTGTGTTT	NA	False	NA	NA	False	AATAAA	-19	NA	101714964	101732972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_+_101715150_101719103_101719199_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
m54284U_201016_223608/6686140/ccs	chr6	-	1706	6	NIC	ENSMUSG00000030057.16	novel	952	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	4588.50247466426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828012	87820063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87825996_87826092_87827885
m54284U_201016_223608/66912974/ccs	chr8	-	2589	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	56	-454	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	77	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	8577	False	NA	-3	True	NA	NA	NA	72154377	72143853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_72145800_72145960_72146544_72154317
m54284U_201016_223608/66914057/ccs	chr3	+	2897	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	116.599933013266	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201016_223608/66978010/ccs	chr15	-	196	1	Intergenic	novelGene_7935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATATTTTACAGATGAC	NA	False	NA	NA	False	NA	NA	NA	98041676	98041480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98041500_98041700
m54284U_201016_223608/67045493/ccs	chr7	+	160	1	Intergenic	novelGene_3823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAGTAATATAGAAA	NA	False	NA	NA	False	NA	NA	NA	43524801	43524961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_43524800_43525000
m54284U_201016_223608/67109398/ccs	chr17	+	3913	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	166.80136210475	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201016_223608/67111418/ccs	chr7	-	4010	11	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_8	7.22841614740048	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282778	105259856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105260418_105260535_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
m54284U_201016_223608/67174413/ccs	chr14	-	186	1	Intergenic	novelGene_7446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTAAAATCTGAGTGTT	9990	False	NA	NA	False	NA	NA	NA	52407316	52407130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_52407100_52407300
m54284U_201016_223608/67175082/ccs	chr2	+	2226	15	NNC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	148.36931650996	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_174257750_174261825_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
m54284U_201016_223608/67176605/ccs	chr11	-	2877	11	NIC	ENSMUSG00000035086.14	novel	2123	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	365	junction_7	51.9161824482502	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193112	101179087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
m54284U_201016_223608/67176652/ccs	chr7	-	3541	16	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	357	junction_11	39.9080053233545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9322	False	NA	-8	True	AATAAA	-20	NA	44804008	44791258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
m54284U_201016_223608/67242180/ccs	chrX	+	2333	2	Antisense	novelGene_ENSMUSG00000025266.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	436	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCCCAAGTGTCAGGG	NA	False	NA	NA	False	NA	NA	NA	149766136	149768628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chrX_+_149766741_149766899
m54284U_201016_223608/67306257/ccs	chr5	-	1889	11	NNC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	171.377244697188	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9810	False	NA	-4	True	AATAAA	-18	NA	115257369	115248357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115256835_115256891_115257283
m54284U_201016_223608/67307670/ccschrUn	chrUn_JH584304v1	-	3004	4	Intergenic	novelGene_9766	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	275.460019280879	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54868_55293_55702_58563_58836_59591
m54284U_201016_223608/67307899/ccs	chr19	-	3469	16	NIC	ENSMUSG00000024660.10	novel	3449	17	NA	NA	0	-60	intron_retention	FALSE	canonical	3	363	junction_12	50.4849372475483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATGACTTTTAGTTTC	NA	False	NA	-26	True	AATAAA	-18	NA	9876853	9849765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
m54284U_201016_223608/67307999/ccs	chr18	-	3204	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	50.5179396078484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-23	True	NA	-23	True	AATAAA	-14	NA	6135970	6025216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6069830_6070092_6135803
m54284U_201016_223608/67372240/ccs	chr5	-	4823	18	ISM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	25742	174	5469	-174	3prime_fragment	FALSE	canonical	3	23	junction_1	26.3728916079505	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTAGGTTTTTTTATTG	NA	False	NA	-15	True	ATTAAA	-14	NA	41975916	41945054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550
m54284U_201016_223608/67373102/ccs	chr2	-	159	2	Intergenic	novelGene_928	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	91563770	91200344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91200453_91563719
m54284U_201016_223608/67373560/ccs	chr15	-	192	1	Intergenic	novelGene_7745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGGAAAGCATACAGG	NA	False	NA	NA	False	NA	NA	NA	68862559	68862367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_68862400_68862600
m54284U_201016_223608/67436912/ccs	chr19	+	2854	18	NIC	ENSMUSG00000071646.10	novel	756	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	219.349052700063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	4087	False	NA	20	True	AATAAA	-24	NA	8919856	8929667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8920084_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
m54284U_201016_223608/67437961/ccs	chr16	-	195	1	Intergenic	novelGene_8298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAATGCTAAACACAC	NA	False	NA	NA	False	NA	NA	NA	73300915	73300720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_73300700_73300900
m54284U_201016_223608/67439119/ccs	chr17	-	1171	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-23434	-15007	at_least_one_novel_splicesite	TRUE	canonical	3	74	junction_4	288.250758888854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	NA	False	NA	NA	False	AATAAA	-15	NA	6757855	6723807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6757652
m54284U_201016_223608/6751300/ccs	chr16	+	3474	1	Antisense	novelGene_ENSMUSG00000035764.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32055415	32058889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_+_32055400_32058900
m54284U_201016_223608/6751318/ccs	chr2	+	248	1	Intergenic	novelGene_690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGGATAGCCTAAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	30861765	30862013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30861800_30862000
m54284U_201016_223608/67633804/ccs	chr18	-	261	1	Intergenic	novelGene_8889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTGCGTAACTATA	NA	False	NA	NA	False	NA	NA	NA	35545588	35545327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35545300_35545600
m54284U_201016_223608/67699858/ccs	chr9	+	2184	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_3	5605.38982605499	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
m54284U_201016_223608/67700942/ccs	chr15	+	1425	9	NIC	ENSMUSG00000023051.12	novel	782	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	96.5083383703191	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102427233	102432111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102427280_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
m54284U_201016_223608/67700982/ccs	chr15	-	3667	14	NIC	ENSMUSG00000022314.11	novel	3956	14	NA	NA	0	-364	combination_of_known_junctions	FALSE	canonical	3	19	junction_13	201.697735067504	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGGAACATACTCAGT	NA	False	NA	-21	True	AATAAA	-20	NA	51854906	51825999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854630
m54284U_201016_223608/67830103/ccs	chr2	+	5908	18	ISM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	81073	0	-208	0	3prime_fragment	FALSE	canonical	3	10	junction_17	7.40616034613513	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCTGGTGTCCTTATTT	NA	False	NA	17	True	AATAAA	-18	NA	49590382	49664790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
m54284U_201016_223608/67830308/ccs	chr10	+	2815	15	NIC	ENSMUSG00000035206.11	novel	2869	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	9.35387074740632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTCCTGTCCTGTGAG	NA	False	NA	11	True	ATTAAA	-19	NA	80691165	80704542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
m54284U_201016_223608/67830755/ccs	chr11	+	2831	7	NNC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_5	938.310257265095	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	False	NA	27	True	ATTAAA	-18	NA	94520592	94536042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532051_94532220_94534119
m54284U_201016_223608/67831198/ccs	chr8	+	192	1	Intergenic	novelGene_4340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAACCAACCAAC	NA	False	NA	NA	False	NA	NA	NA	73226202	73226394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_73226200_73226400
m54284U_201016_223608/68027666/ccs	chr5	+	1943	11	NIC	ENSMUSG00000056367.15	novel	2031	11	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	16	junction_6	37.7095478625772	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCCTTGTGGTCTC	NA	False	NA	10	True	AATAAA	-18	NA	25964994	26055686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_25965127_26003443_26003500_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
m54284U_201016_223608/68028705/ccs	chr4	-	183	1	Intergenic	novelGene_2250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGGGTTACTCTGTG	NA	False	NA	NA	False	NA	NA	NA	135787858	135787675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135787700_135787900
m54284U_201016_223608/68029148/ccs	chr19	+	200	1	Intergenic	novelGene_9218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGCTGTTGGCAAGGCA	NA	False	NA	NA	False	NA	NA	NA	32683682	32683882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_32683700_32683900
m54284U_201016_223608/68093877/ccs	chr11	-	2688	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_6	61.2106510474516	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508762	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201016_223608/68159425/ccs	chr15	-	212	1	Intergenic	novelGene_7693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGGGTGGGGAGAGGAG	3896	False	NA	NA	False	NA	NA	NA	38705898	38705686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_38705700_38705900
m54284U_201016_223608/6818411/ccs	chr16	-	166	2	Intergenic	novelGene_8069	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGAATGAATGAATAAAT	NA	False	NA	NA	False	NA	NA	NA	13544028	13524890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_13525010_13543981
m54284U_201016_223608/68291072/ccs	chr7	-	3189	11	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	75.555343953952	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9604	False	NA	87	True	NA	NA	NA	3218931	3204497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3213722_3214125_3218840
m54284U_201016_223608/68354909/ccs	chr11	-	1973	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	204.16338161025	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGGTTTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	95873437	95853957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
m54284U_201016_223608/68356010/ccs	chr11	+	2087	13	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	143.551457092338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268545	50277355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
m54284U_201016_223608/68402/ccs	chr8	-	3276	5	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	0	-821	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	38.9711431702997	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484161	26471452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479770_26484114
m54284U_201016_223608/68421305/ccs	chr7	+	2036	11	NIC	ENSMUSG00000030435.17	novel	2183	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_2	528.922527408315	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCTCATCTGTGTCCA	35	False	NA	33	True	ATTAAA	-23	NA	5065243	5082937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_5065336_5069401_5069538_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
m54284U_201016_223608/68486328/ccs	chr4	-	2902	4	NIC	ENSMUSG00000040025.18	novel	4129	5	NA	NA	50	226	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	439.377590082456	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGTACCACTTAGTATT	NA	False	NA	-14	True	AATAAA	-23	NA	131939564	131913374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_131914259_131931442_131933027_131938062_131938143_131939210
m54284U_201016_223608/68552249/ccs	chr18	+	204	1	Intergenic	novelGene_8929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTCCCCTTCCCTCTT	NA	False	NA	NA	False	AATAAA	-44	NA	39228767	39228971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_39228800_39229000
m54284U_201016_223608/68553333/ccs	chr11	-	1482	7	NIC	ENSMUSG00000018727.20	novel	1375	8	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	74.0855361502275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCATTGATTCCTTTTC	NA	False	NA	-9	True	AATATA	-16	NA	113600499	113588997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_113589493_113590661_113590809_113593238_113593333_113594096_113594193_113597242_113597396_113599629_113599681_113600053
m54284U_201016_223608/68681881/ccs	chr16	-	2117	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATATGCATATAATGTT	4072	False	NA	NA	False	AATAAA	-20	NA	55936661	55932444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_55934491_55936590
m54284U_201016_223608/68682734/ccs	chr5	-	2631	8	ISM	ENSMUSG00000032661.10	ENSMUST00000044833.9	4720	16	15896	0	-4110	0	3prime_fragment	FALSE	canonical	1	3	junction_5	2.43276948084663	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTGGTTGTGATG	7691	False	NA	NA	False	NA	NA	NA	120899830	120891162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_120892441_120892620_120892769_120894091_120894331_120894969_120895146_120896777_120897064_120897985_120898160_120899189_120899335_120899645
m54284U_201016_223608/68684570/ccs	chr13	-	3043	15	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_14	2405.27368823303	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5697	False	NA	-23	True	AATAAA	-15	NA	58549384	58539052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58548923
m54284U_201016_223608/68684636/ccs	chr15	+	1965	11	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	92.8168088225403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATATATATATA	7121	False	NA	18	True	NA	NA	NA	76361621	76385178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382116_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
m54284U_201016_223608/68747710/ccs	chr9	-	3128	23	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_16	70.2958329649162	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
m54284U_201016_223608/68748503/ccs	chr5	-	3418	11	NIC	ENSMUSG00000029475.18	novel	3532	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_6	104.312031904282	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	8594	False	NA	NA	False	TATAAA	-21	NA	123038418	123008730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
m54284U_201016_223608/6881783/ccs	chr2	-	4065	6	NIC	ENSMUSG00000078867.10	novel	588	7	NA	NA	0	2802	combination_of_known_splicesites	FALSE	canonical	3	51	junction_2	99.4633600880244	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	177090113	177076114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_177079803_177080953_177081015_177081219_177081347_177081614_177081652_177086489_177086545_177090016
m54284U_201016_223608/6882038/ccs	chr9	+	2495	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	86.1095777193223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125505	99182457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_99125544_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
m54284U_201016_223608/6882223/ccs	chr2	-	1635	7	ISM	ENSMUSG00000026766.17	ENSMUST00000134480.8	803	8	-30	-469	0	0	intron_retention	FALSE	canonical	3	69	junction_6	213.816445163187	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186729	50169892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182926_50186263
m54284U_201016_223608/6883092/ccs	chr3	+	5095	22	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	414	junction_14	44.6200894323665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052151	152098970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
m54284U_201016_223608/6883876/ccs	chr17	-	2007	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_2	4.01995024844836	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	2	True	NA	NA	NA	34243626	34240057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34240458_34240656_34240931_34241269_34242169_34242266_34242428_34243262_34243393_34243483
m54284U_201016_223608/68879034/ccs	chr19	-	2475	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-697	-1256	-697	1256	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCGTCACTGAGGACAC	NA	False	NA	NA	False	AATAAA	-10	NA	40550199	40547724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_40547700_40550200
m54284U_201016_223608/68879934/ccs	chr17	+	175	1	Intergenic	novelGene_8400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGTTTGTTTGGTTTG	NA	False	NA	3	True	NA	NA	NA	24001075	24001250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_24001100_24001200
m54284U_201016_223608/68880980/ccs	chr2	+	196	1	Intergenic	novelGene_819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATAGCTCTCTGGAAAA	NA	False	NA	NA	False	NA	NA	NA	66466271	66466467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_66466300_66466500
m54284U_201016_223608/68944743/ccs	chr1	-	2233	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_13	2012.11850145694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86286691	86278217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286688
m54284U_201016_223608/69012296/ccs	chr11	+	184	1	Intergenic	novelGene_6153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTCTTCAGAGGACCT	NA	False	NA	NA	False	NA	NA	NA	86149734	86149918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_86149700_86149900
m54284U_201016_223608/69271633/ccs	chr3	+	778	3	NNC	ENSMUSG00000027703.17	novel	2387	8	NA	NA	10841	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	6.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTGTGGGAAGAATG	NA	False	NA	5	True	NA	NA	NA	30712875	30726580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_30713166_30714049_30714247_30726289
m54284U_201016_223608/69274373/ccs	chr2	-	196	1	Intergenic	novelGene_920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTTAACCTTGACCAT	NA	False	NA	NA	False	NA	NA	NA	90730944	90730748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_90730700_90730900
m54284U_201016_223608/69470358/ccs	chr15	-	4363	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	0	-230	combination_of_known_junctions	FALSE	canonical	3	34	junction_31	46.9187191954075	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1656	False	NA	-9	True	ATTAAA	-19	NA	73295061	73077180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73266496_73266594_73294857
m54284U_201016_223608/69600473/ccs	chr12	+	2534	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	81	junction_9	361.279762326464	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713247	98753107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
m54284U_201016_223608/69601048/ccs	chr11	-	3979	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	178.625891694551	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120038546_120038665_120041805
m54284U_201016_223608/69665769/ccs	chr11	+	3890	6	NNC	ENSMUSG00000045671.18	novel	4449	7	NA	NA	28571	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	25.0647162361755	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGCTTTGGGGTATTT	7169	False	NA	3	True	TATAAA	-15	NA	19933140	19974026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_19933245_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
m54284U_201016_223608/69665866/ccs	chr11	-	2420	8	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	0	-3782	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	26.7177232318526	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTCAGGTGTCACATGC	NA	False	NA	NA	False	NA	NA	NA	107361525	107102499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_107103485_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
m54284U_201016_223608/69732769/ccs	chr11	-	1375	4	NNC	ENSMUSG00000046909.10	novel	1309	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	123.047416334788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCCTTCTTTGCTTAA	NA	False	NA	-4	True	AATAAA	-14	NA	80033001	80027503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_80028106_80028743_80028894_80030625_80031150_80032902
m54284U_201016_223608/69863084/ccs	chr15	+	707	4	NNC	ENSMUSG00000022587.15	novel	1122	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_3	242.10511950161	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8387	False	NA	27	True	AATAAA	-15	NA	74827501	74831180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_74827567_74829625_74829727_74830117_74830238_74830759
m54284U_201016_223608/69863577/ccs	chr11	-	2532	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	184	junction_5	84.7049326771157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508739	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201016_223608/69864075/ccs	chr18	+	2809	21	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	211.235792421644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	13	True	NA	72	True	ATTAAA	-28	NA	3383256	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_3383398_3399845_3399987_3405686_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
m54284U_201016_223608/69928163/ccs	chr4	+	6573	11	NNC	ENSMUSG00000028282.13	novel	6557	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	83.3396064305562	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	2	True	NA	7	True	AATAAA	-20	NA	32615450	32653265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631811_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
m54284U_201016_223608/69929555/ccs	chr8	-	2654	11	NNC	ENSMUSG00000061410.7	novel	625	6	NA	NA	0	579	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	10.6470653233649	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGCCCTCTTTGACGTG	NA	False	NA	NA	False	AAAAAG	-8	NA	122379640	122332373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_122332815_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
m54284U_201016_223608/70058789/ccs	chr5	-	185	1	Intergenic	novelGene_2647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATAGCTATGAAAAG	NA	False	NA	NA	False	NA	NA	NA	86591607	86591422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_86591400_86591600
m54284U_201016_223608/70060533/ccs	chr2	-	157	1	Intergenic	novelGene_944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAATAAAAAAAAAAAAA	8936	False	NA	NA	False	NA	NA	NA	91992962	91992805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91992800_91993000
m54284U_201016_223608/70189583/ccs	chr12	-	1701	11	NIC	ENSMUSG00000001627.13	novel	3378	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	198.773640103511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTGTAGTGAGCAGA	NA	False	NA	-3	True	AATAAA	-21	NA	40273184	40253129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
m54284U_201016_223608/70191232/ccs	chr5	-	2332	5	NIC	ENSMUSG00000037979.14	novel	809	5	NA	NA	228	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	82.6177190437983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGTGGTGGTTCAGGT	NA	False	NA	NA	False	NA	NA	NA	124939260	124911481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124913356_124913543_124913631_124916006_124916049_124916724_124916872_124939078
m54284U_201016_223608/70255572/ccs	chr9	+	2163	9	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	128	junction_5	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447084	108449973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
m54284U_201016_223608/70256012/ccs	chr13	+	171	1	Intergenic	novelGene_7277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATTGCCTTACATT	NA	False	NA	NA	False	NA	NA	NA	100644376	100644547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_100644400_100644500
m54284U_201016_223608/70256643/ccs	chr3	-	2818	21	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	30.6652898241644	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257303	89246950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_89247261_89247361_89247481_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
m54284U_201016_223608/70257327/ccs	chr14	+	2481	11	NIC	ENSMUSG00000022070.8	novel	2726	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	97.5676688252825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTTTTCCTTGTTCTGT	NA	False	NA	5	True	AATAAA	-16	NA	99283889	99311976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_99284117_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
m54284U_201016_223608/70387612/ccs	chr2	-	191	1	Intergenic	novelGene_646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	26543679	26543488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_26543500_26543700
m54284U_201016_223608/70453976/ccs	chr10	-	193	1	Intergenic	novelGene_5551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGGTTAGTTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	116933171	116932978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_116933000_116933200
m54284U_201016_223608/70454011/ccs	chr9	+	177	1	Intergenic	novelGene_5079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATACTTGTTGG	NA	False	NA	NA	False	NA	NA	NA	108132642	108132819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108132600_108132800
m54284U_201016_223608/70519311/ccs	chr4	-	2335	14	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	-87	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	45.0459331646549	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGGCCTTATCATTCC	3132	False	NA	2	True	AATAAA	-15	NA	116991247	116985851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990385_116990503_116990591_116990700_116990848
m54284U_201016_223608/70582555/ccs	chrX	+	3666	13	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1538	junction_12	91.5752195374564	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201016_223608/70583211/ccs	chr12	-	2395	14	NNC	ENSMUSG00000021039.10	novel	2232	14	NA	NA	-4931	0	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	244.437985988436	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTTATTTAGTGGA	NA	False	NA	-2	True	AATAAA	-20	NA	87523975	87496679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87523785
m54284U_201016_223608/70583927/ccs	chr4	+	695	6	Fusion	ENSMUSG00000078502.11_ENSMUSG00000084350.2	novel	2498	5	NA	NA	0	-2017	multi-exon	FALSE	canonical	2	3	junction_4	97.8885080078351	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTAAACAGTTTAACTTT	NA	False	NA	NA	False	AATACA	-6	NA	145311772	145554495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_+_145311905_145510590_145510684_145541336_145541383_145551778_145551837_145552678_145552806_145554256
m54284U_201016_223608/70584436/ccs	chr4	+	1071	8	NNC	ENSMUSG00000057375.14	novel	524	3	NA	NA	2286	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	124.64774857369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCCTTCAGCTCTT	11	True	NA	29	True	AGTAAA	-19	NA	107178453	107217020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_107178547_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
m54284U_201016_223608/70648410/ccs	chr17	+	2185	4	Intergenic	novelGene_8385	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	41.206795556073	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGGGATGCAACATA	NA	False	NA	13	True	NA	NA	NA	17225348	17426486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_17225539_17257537_17257665_17423325_17423387_17424679
m54284U_201016_223608/70650119/ccs	chr11	+	194	1	Intergenic	novelGene_5907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAATGATTTGAGAATTA	NA	False	NA	9	True	ATTAAA	-17	NA	62406666	62406860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_62406700_62406900
m54284U_201016_223608/70650333/ccs	chr8	-	175	1	Intergenic	novelGene_4224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAAACCTTCCTGTACC	NA	False	NA	NA	False	NA	NA	NA	22899019	22898844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_22898800_22899000
m54284U_201016_223608/70713453/ccs	chr1	+	3621	11	NNC	ENSMUSG00000033964.13	novel	8361	11	NA	NA	0	-1090	intron_retention	FALSE	canonical	2	5	junction_1	15.9762323468332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGAGTTTAGAAACTT	NA	False	NA	NA	False	ATTAAA	-19	NA	139350119	139375831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_139350334_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
m54284U_201016_223608/70713455/ccs	chr2	+	4475	16	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1870	junction_1	201.108196418412	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120978	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
m54284U_201016_223608/70714145/ccs	chr17	-	4425	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	0	-1268	intron_retention	FALSE	canonical	3	305	junction_6	57.9901469463317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATGTGTGTATGTATG	NA	False	NA	-3	True	AATAAA	-24	NA	53996361	53983081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
m54284U_201016_223608/70715362/ccs	chr5	+	1804	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	0	255	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_2	193.045097638407	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	20	True	AATAAA	-21	NA	124717204	124734905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_124717265_124720510_124720591_124722024_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
m54284U_201016_223608/70715903/ccs	chr9	-	174	1	Intergenic	novelGene_4899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGGGGGAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	66562060	66561886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66561900_66562100
m54284U_201016_223608/7079006/ccs	chr2	+	2879	8	NIC	ENSMUSG00000026662.14	novel	5319	9	NA	NA	262	346	combination_of_known_junctions	FALSE	canonical	3	91	junction_2	174.392707205693	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAGTGCAGAAACTATAC	4354	False	NA	6	True	AATAAA	-15	NA	4886636	4913294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_4886672_4889142_4889417_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
m54284U_201016_223608/7080334/ccs	chr1	-	1802	7	NIC	ENSMUSG00000040843.11	novel	4380	7	NA	NA	0	660	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	206.382062097353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTTTGCTGTTTATT	NA	False	NA	-5	True	AATAAA	-18	NA	165064512	165042490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064240
m54284U_201016_223608/70846324/ccs	chr17	+	2792	5	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1677	junction_3	102.616701856959	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTTTTCCATTCATT	NA	False	NA	17	True	AATAAA	-18	NA	29709726	29715086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29710200_29710298_29710406_29710493_29711006_29712695_29712873_29713563
m54284U_201016_223608/70846768/ccs	chr2	-	180	1	Intergenic	novelGene_1265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168631509	168631329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168631300_168631500
m54284U_201016_223608/70847060/ccs	chr5	-	248	1	Intergenic	novelGene_2471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTCTGTGAATAATTAA	NA	False	NA	NA	False	ATTAAA	-33	NA	20861722	20861474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_20861500_20861700
m54284U_201016_223608/70975656/ccs	chr1	+	3229	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	171	junction_3	608.300614626602	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724143	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
m54284U_201016_223608/70976249/ccs	chrX	-	2158	10	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1120	junction_7	129.110633007338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
m54284U_201016_223608/70976765/ccs	chr6	+	1443	8	NIC	ENSMUSG00000030120.15	novel	1475	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	1323.79340517765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGATTCTGGCTGTACTT	NA	False	NA	27	True	AATAAA	-17	NA	124908348	124913108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124908550_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
m54284U_201016_223608/71238723/ccs	chr1	+	178	1	Intergenic	novelGene_289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGCTGGGCATTACA	NA	False	NA	NA	False	NA	NA	NA	127848906	127849084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_127848900_127849100
m54284U_201016_223608/71239690/ccs	chr7	+	3541	1	Antisense	novelGene_ENSMUSG00000078671.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAGAAAGA	2187	False	NA	NA	False	NA	NA	NA	73110471	73114012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_73110500_73114000
m54284U_201016_223608/71240337/ccs	chr7	+	561	3	NNC	ENSMUSG00000025491.15	novel	736	2	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTCCTGTGTTGAGT	NA	False	NA	24	True	AATAAA	-28	NA	140548011	140549738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_140548037_140548152_140548352_140549401
m54284U_201016_223608/71304334/ccs	chr17	-	4061	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_31	57.3580363675178	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035454	80887945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
m54284U_201016_223608/71305633/ccs	chr11	+	179	1	Intergenic	novelGene_5658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTTGTATGTA	1679	False	NA	NA	False	NA	NA	NA	4050306	4050485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4050300_4050500
m54284U_201016_223608/71370696/ccs	chr6	+	3707	8	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	15.8513502933488	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGCCTGTGTGTGCT	NA	False	NA	12	True	ATTAAA	-17	NA	127430582	127471203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_127430786_127444994_127445116_127447664_127447794_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
m54284U_201016_223608/71370845/ccs	chrX	-	3327	16	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-126	-56486	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	177.057228664131	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTTCTACTTTGTTT	NA	False	NA	-1	True	NA	NA	NA	59224575	59157804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_59158819_59160462_59160507_59164448_59164497_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
m54284U_201016_223608/7145201/ccs	chr1	-	189	1	Intergenic	novelGene_234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCTGGCTTATAGGTT	NA	False	NA	NA	False	NA	NA	NA	86999199	86999010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_86999000_86999200
m54284U_201016_223608/71502568/ccs	chr7	+	3569	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	65.7594522145338	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCTTTTATTTGGTTC	NA	False	NA	23	True	AATAAA	-25	NA	130467616	130515042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
m54284U_201016_223608/71566328/ccs	chr8	-	7678	49	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_46	334.129754299633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
m54284U_201016_223608/71567298/ccs	chr7	+	2068	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	164	junction_5	17.6562469272367	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTAAAGTCTCTGTTCC	580	False	NA	20	True	AATAAA	-21	NA	28092386	28098813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
m54284U_201016_223608/71567962/ccs	chr11	+	190	1	Intergenic	novelGene_5847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCCACCAGTGCCGG	NA	False	NA	NA	False	NA	NA	NA	54769253	54769443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_54769300_54769400
m54284U_201016_223608/71632887/ccs	chr1	-	2165	17	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	96.678510409501	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTAGAGTCTTCC	NA	False	NA	-16	True	AATGAA	-26	NA	160898228	160869074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160898112
m54284U_201016_223608/71633152/ccs	chr3	-	4530	23	NNC	ENSMUSG00000033222.17	novel	4541	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_9	52.8610372221199	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGGTGATGCTGTGTGTT	NA	False	NA	-7	True	AATAAA	-17	NA	100876979	100846175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857510_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
m54284U_201016_223608/71828252/ccs	chr3	-	3175	21	NIC	ENSMUSG00000014601.14	novel	3215	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	51.0788361261296	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGCCTTGTGTGTAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	107539010	107519847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_107520783_107521950_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
m54284U_201016_223608/71828412/ccs	chr14	-	4331	8	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	265.835072393177	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059699	47045605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47055872_47056033_47059557
m54284U_201016_223608/71829360/ccs	chr11	-	2960	11	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	349	junction_5	34.9978570772555	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508739	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201016_223608/71959589/ccschrUn	chrUn_JH584304v1	-	2848	7	Intergenic	novelGene_9767	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	244.42818759073	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
m54284U_201016_223608/72092254/ccs	chr1	-	2422	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	159	junction_5	2006.43037263611	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86287122	86278217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280850_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
m54284U_201016_223608/7210736/ccs	chr11	+	2311	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-5025	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	51.3272283978007	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1431	False	NA	18	True	TATAAA	-20	NA	87739015	87754629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87739055_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
m54284U_201016_223608/7210796/ccs	chr7	-	3829	5	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	0	1644	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	65.3657976314831	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713540	27686492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713445
m54284U_201016_223608/72221526/ccs	chrX	-	197	1	Intergenic	novelGene_9690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGACACTCCAACCCA	NA	False	NA	NA	False	NA	NA	NA	154953308	154953111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_154953100_154953300
m54284U_201016_223608/72222414/ccs	chr11	+	2208	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	136.035411331369	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268595	50277355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_50268630_50269085_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
m54284U_201016_223608/72222594/ccs	chr4	+	4150	17	NIC	ENSMUSG00000028613.16	novel	7391	19	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	11	junction_4	21.0887262536171	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659360	107731096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
m54284U_201016_223608/72287776/ccs	chr12	+	2297	15	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	27	junction_13	36.2404808050278	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGTTCATAACTATTTT	NA	False	NA	NA	False	ATTAAA	-33	NA	111725282	111773160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111772441_111772509_111772748
m54284U_201016_223608/72288129/ccs	chr8	+	5444	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	268	junction_14	55.3667706295105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106607791_106611132_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
m54284U_201016_223608/72288706/ccs	chr11	+	1156	11	NNC	ENSMUSG00000023170.15	novel	1159	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_10	108.352018901357	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCCTGAGTGCTGTTTA	4091	False	NA	12	True	AATAAA	-22	NA	69804875	69807417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807249
m54284U_201016_223608/72352112/ccs	chr2	+	185	1	Intergenic	novelGene_1175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGTTTTAAAAGGTGT	5033	False	NA	NA	False	NA	NA	NA	156013146	156013331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_156013100_156013300
m54284U_201016_223608/72353308/ccs	chr8	+	2065	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	0	-383	at_least_one_novel_splicesite	TRUE	canonical	2	16	junction_6	138.293145465855	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTTCCTGCTGTTGCC	2378	False	NA	20	True	ATTAAA	-25	NA	70495683	70524614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513197_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
m54284U_201016_223608/72353970/ccs	chr4	-	1826	9	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	54	0	intron_retention	TRUE	canonical	3	1043	junction_4	212.79787945372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294495	118290097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118294040_118294137
m54284U_201016_223608/72418190/ccs	chr6	-	3810	14	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	147.495782709743	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49191638	49062156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49191230
m54284U_201016_223608/72419604/ccs	chr6	-	1194	4	NNC	ENSMUSG00000107666.2	novel	1505	9	NA	NA	53549	-1029	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	4.54606056566195	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTGTAAAAATCAATTC	NA	False	NA	NA	False	AAAAAG	-6	NA	134326829	134286942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_134287767_134291473_134291617_134293190_134293294_134326705
m54284U_201016_223608/72420158/ccs	chr11	+	1307	7	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-809	combination_of_known_splicesites	FALSE	canonical	3	74	junction_6	1050.71521937308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206682	97219937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97219307
m54284U_201016_223608/72483222/ccs	chr3	-	192	1	Intergenic	novelGene_1561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACTGGCTATTTTTCCA	NA	False	NA	NA	False	NA	NA	NA	94984133	94983941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_94983900_94984100
m54284U_201016_223608/72548971/ccs	chr11	+	4002	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	combination_of_known_splicesites	FALSE	canonical	3	37	junction_24	551.711502143305	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332180	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341702
m54284U_201016_223608/72551111/ccs	chr3	-	1903	14	NIC	ENSMUSG00000068921.15	novel	4760	13	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	232.06477365511	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857870	88830941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174_88857249_88857422
m54284U_201016_223608/72615945/ccs	chr8	+	4335	4	NIC	ENSMUSG00000031986.7	novel	4464	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	34.7786652353933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGATGTGTCTTTCCG	NA	False	NA	9	True	AATAAA	-18	NA	125624624	125632900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_125625121_125625814_125625915_125628363_125628632_125629429
m54284U_201016_223608/72746460/ccs	chr4	+	2985	10	NIC	ENSMUSG00000037366.15	novel	2248	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	13.8171480504087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGGCTGGCTTTCTTCT	1866	False	NA	20	True	ATTAAA	-22	NA	134123717	134154724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134123736_134130280_134130416_134131403_134131555_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
m54284U_201016_223608/7274951/ccs	chr9	+	1872	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-147	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6157.49403291892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_64081197_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
m54284U_201016_223608/7276523/ccs	chr9	-	3694	18	NIC	ENSMUSG00000031996.18	novel	3634	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	434.500086604727	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTTGTGTTCCTGACCA	8715	False	NA	-9	True	AATAAA	-19	NA	31123111	31060852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
m54284U_201016_223608/72811288/ccs	chr7	-	185	1	Intergenic	novelGene_3917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAAGGGGCTGGGGGCTC	NA	False	NA	NA	False	NA	NA	NA	80004634	80004449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_80004400_80004600
m54284U_201016_223608/72812754/ccs	chr5	+	1295	9	NNC	ENSMUSG00000016503.19	novel	1298	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	164.357841309747	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGCTGTTTCCGTCGT	NA	False	NA	23	True	ATTAAA	-23	NA	146885466	146892424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891936_146891994_146892177
m54284U_201016_223608/72813010/ccs	chr2	-	256	3	NIC	ENSMUSG00000078865.9	novel	1348	4	NA	NA	0	-976	combination_of_known_splicesites	FALSE	canonical	3	155	junction_2	266.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACTGTAACCAATGTG	2337	False	NA	NA	False	NA	NA	NA	177270003	177261972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_177262087_177263226_177263288_177269922
m54284U_201016_223608/72877399/ccs	chr8	+	3784	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	120.768818152769	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363199	106409554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408072
m54284U_201016_223608/72878312/ccs	chr3	+	2151	12	NIC	ENSMUSG00000042572.13	novel	3077	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	944	junction_1	74.5925571808398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTCTTGACTCATC	NA	False	NA	23	True	AAAACA	-22	NA	89680922	89690051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89681346_89683383_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
m54284U_201016_223608/72942878/ccs	chr1	+	991	6	NIC	ENSMUSG00000026429.10	novel	1116	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	296.487841234679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTTTATATGAAACG	NA	False	NA	15	True	AATAAA	-17	NA	134890328	134901900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899843_134899928_134901537
m54284U_201016_223608/72942959/ccs	chr11	+	7446	41	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	17.6113422259634	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77654126	77756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
m54284U_201016_223608/72943859/ccs	chr3	+	1999	14	NIC	ENSMUSG00000027671.15	novel	922	8	NA	NA	-184	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	382.691171239132	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	23	True	AATAAA	-20	NA	32763128	32781122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_32763492_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
m54284U_201016_223608/72944409/ccs	chr3	+	2410	16	NNC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	18.7538440503985	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGTATAAGTTTTAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	144824348	144859656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
m54284U_201016_223608/73007461/ccs	chr11	-	3018	17	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	19.6666556320591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172300	32159584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
m54284U_201016_223608/73008549/ccs	chr3	+	471	1	FSM	ENSMUSG00000044330.9	ENSMUST00000054148.9	288	1	-74	-109	-74	109	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAATGCCAAGC	NA	False	NA	NA	False	AATAAA	-33	NA	85823015	85823486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_85823000_85823500
m54284U_201016_223608/73073189/ccs	chr15	-	1989	9	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	214	junction_6	10244.8949482169	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
m54284U_201016_223608/73073212/ccs	chr15	+	204	1	Genic_Genomic	ENSMUSG00000022438.7	novel	NA	NA	NA	NA	2427	15	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAAAGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	84157918	84158122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr15_+_84157900_84158100
m54284U_201016_223608/73073252/ccs	chr2	+	2724	17	NNC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	392.719638984034	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867577	84877453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_84867673_84868137_84868299_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
m54284U_201016_223608/73205764/ccs	chr2	-	179	1	Intergenic	novelGene_950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGAGAGAGAGAGAGAG	382	False	NA	NA	False	NA	NA	NA	92460104	92459925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_92459900_92460100
m54284U_201016_223608/73206298/ccs	chr16	-	1327	3	NNC	ENSMUSG00000039568.7	novel	1851	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_2	157	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCACCAGGCTCTGTAGT	169	False	NA	-11	True	NA	NA	NA	4697669	4692651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_4693734_4694225_4694282_4697480
m54284U_201016_223608/7340538/ccs	chr3	+	2121	9	NIC	ENSMUSG00000028199.19	novel	2507	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	62.745019722684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTCTGTCTCGTGTG	NA	False	NA	18	True	AGTAAA	-18	NA	154302833	154328819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_154302922_154310528_154310753_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
m54284U_201016_223608/7341482/ccs	chr2	+	2541	18	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_16	718.681058375563	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120978	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157165142_157165191_157167630
m54284U_201016_223608/7342208/ccs	chr19	-	202	1	Intergenic	novelGene_9274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTGCATGAGGGAGATG	NA	False	NA	NA	False	AAGAAA	-5	NA	43566956	43566754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_43566800_43567000
m54284U_201016_223608/7342247/ccs	chr16	-	1021	6	NIC	ENSMUSG00000033809.16	novel	1132	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	164.001951207905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGTGCAGCATACATAA	NA	False	NA	-8	True	AATAAA	-15	NA	20429518	20424221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20429292
m54284U_201016_223608/7342393/ccs	chr2	-	2383	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5293	-53	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	37.8665419598886	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCCTCCTGATGAC	NA	False	NA	-5	True	AATAAA	-16	NA	71164477	71105086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164435
m54284U_201016_223608/73466127/ccs	chr1	+	1867	8	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	74.0904025842892	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097908	171104469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171097985_171098772_171098944_171099397_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
m54284U_201016_223608/73467535/ccs	chr11	+	1278	9	NNC	ENSMUSG00000020407.14	novel	430	5	NA	NA	206	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	933.373551960843	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068992	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_9069170_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
m54284U_201016_223608/73534274/ccs	chr5	+	4932	24	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.7049976560749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTTACTTTTTATC	NA	False	NA	80	True	AAGAAA	-11	NA	110324744	110371067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110324916_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
m54284U_201016_223608/73598221/ccs	chr11	+	4120	26	NNC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_23	540.379549576036	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332202	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340827_72340921_72341451_72341601_72341702
m54284U_201016_223608/73729742/ccs	chr5	+	4194	16	NIC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	692.923006785987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213582	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108213832_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201016_223608/73730087/ccs	chr12	+	4838	11	NIC	ENSMUSG00000021282.18	novel	4050	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1736	junction_1	192.565027977564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504630	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
m54284U_201016_223608/73859721/ccs	chr10	-	1265	9	NIC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	177	junction_7	135.128411150283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62855171_62855307_62859498
m54284U_201016_223608/73859846/ccs	chr7	+	5422	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	49.6786907872893	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808696	140842663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
m54284U_201016_223608/73861445/ccs	chr8	+	2068	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	113.375964714749	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415917	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201016_223608/73924671/ccs	chr9	+	601	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	261	-64	261	64	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACACATCCTTGGGTGGA	NA	False	NA	NA	False	CATAAA	-35	NA	84306297	84306898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_84306300_84306900
m54284U_201016_223608/73924772/ccs	chr15	+	2485	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_13	127.304185145484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761750	78778785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78777366_78777537_78777738_78777850_78777933
m54284U_201016_223608/73927339/ccs	chr2	+	2733	1	Antisense	novelGene_ENSMUSG00000035949.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATCATGGAATGCTCAAC	NA	False	NA	NA	False	NA	NA	NA	34711368	34714101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_34711400_34714100
m54284U_201016_223608/73991083/ccs	chr5	-	174	1	Intergenic	novelGene_2635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	77396969	77396795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77396800_77397000
m54284U_201016_223608/73991782/ccs	chr7	+	1228	3	NNC	ENSMUSG00000054716.5	novel	1484	3	NA	NA	269	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	61.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACGATGCCTGTAAGTGA	NA	False	NA	31	True	AATAAA	-16	NA	126843714	126853975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_126843781_126844143_126844307_126852976
m54284U_201016_223608/73991812/ccs	chrX	-	1063	3	Intergenic	novelGene_9643	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	13	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTCTAGAGTTTTTATG	NA	False	NA	NA	False	AATAAA	-25	NA	138300892	138296085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_138296298_138297305_138297544_138300279
m54284U_201016_223608/74058003/ccs	chr5	+	5333	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	36.3321480940489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2013	False	NA	7	True	AATAAA	-8	NA	33021064	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
m54284U_201016_223608/74121269/ccs	chr9	-	5575	19	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	71	-71	combination_of_known_junctions	FALSE	canonical	3	65	junction_18	82.5942222891865	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53581243	53525952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53581150
m54284U_201016_223608/74123432/ccs	chr8	+	2531	8	NIC	ENSMUSG00000019428.17	novel	1720	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	562.342259061624	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980396	70987978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70985400_70986766_70986845_70987132_70987265_70987516
m54284U_201016_223608/74123672/ccs	chr18	-	2312	7	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	468.174824896285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38472033	38460610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471914
m54284U_201016_223608/74187998/ccs	chr3	+	297	1	Intergenic	novelGene_1495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCAGCACATGGCTACT	3508	False	NA	NA	False	NA	NA	NA	88590402	88590699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88590400_88590700
m54284U_201016_223608/74252741/ccs	chr2	+	1133	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	115.994827470883	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	False	NA	37	True	CATAAA	-32	NA	26806392	26810195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808940_26809068_26809203_26809371_26809738
m54284U_201016_223608/74252896/ccs	chr2	+	2761	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	154	junction_14	56.5337060288406	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266258	130285654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282949_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
m54284U_201016_223608/74253525/ccs	chr2	+	2511	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	208.815670808012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119891_130120075_130120211_130120816
m54284U_201016_223608/74318154/ccs	chr6	+	2364	6	NIC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5781	junction_4	317.012050244151	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5871	False	NA	37	True	AATATA	-25	NA	67243993	67261295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_67244394_67248181_67248333_67248870_67249923_67254744_67254923_67258631_67258806_67260886
m54284U_201016_223608/74320348/ccs	chrX	-	2841	1	NIC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGAATCCTGTGTAATA	NA	False	NA	-6	True	AATAAA	-20	NA	73412164	73409323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_73409300_73412200
m54284U_201016_223608/74384819/ccs	chr15	+	2708	5	NNC	ENSMUSG00000033669.9	novel	2772	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	34.1055347414463	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGCCTGTACTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	76763519	76776595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_76763554_76764938_76764983_76765311_76765439_76772433_76772548_76774206
m54284U_201016_223608/74515456/ccs	chr19	-	2934	11	NIC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	0	-1584	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	59.3	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTTCCTATCACTG	4335	False	NA	-7	True	AATAAA	-14	NA	5925302	5901313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924837_5925118
m54284U_201016_223608/74515512/ccs	chr11	+	3359	3	NNC	ENSMUSG00000040599.14	novel	3003	3	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	59	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTATTATTGCTTAAT	NA	False	NA	16	True	AATAAA	-37	NA	70910436	70918197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_70911372_70915375_70915538_70915935
m54284U_201016_223608/74580870/ccs	chr17	+	2976	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	371	junction_2	28.0978610559304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980366	57018764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
m54284U_201016_223608/74581938/ccs	chr5	+	199	1	Intergenic	novelGene_2585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATAAATATAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	65489913	65490112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_65489900_65490100
m54284U_201016_223608/74646685/ccs	chr8	-	3778	13	NIC	ENSMUSG00000031751.15	novel	3880	14	NA	NA	161	-335	intron_retention	FALSE	canonical	3	217	junction_1	14.6370439486788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAACTGCTGTTAGTTA	NA	False	NA	-43	True	AATAAA	-17	NA	94739309	94698550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
m54284U_201016_223608/74712610/ccs	chr15	+	3485	1	Genic_Genomic	ENSMUSG00000022619.6	novel	NA	NA	NA	NA	6464	522	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAAAAAAAAAAACCCAA	8851	False	NA	NA	False	NA	NA	NA	89345708	89349193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr15_+_89345700_89349200
m54284U_201016_223608/74777084/ccs	chr4	-	875	5	NIC	ENSMUSG00000057236.11	novel	722	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	413.387454454051	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2492	False	NA	-29	True	AATAAA	-14	NA	129229163	129203309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129203670_129216594_129216663_129222380_129222527_129228289_129228438_129229010
m54284U_201016_223608/74843800/ccs	chr3	+	1727	9	NIC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	0	76	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	236.604495942068	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTGCTTCAAACTAGTT	NA	False	NA	25	True	AATAAA	-35	NA	30847484	30874257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873709
m54284U_201016_223608/74844984/ccs	chr10	-	178	1	Intergenic	novelGene_5642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAGAAAAAGA	8444	False	NA	NA	False	NA	NA	NA	128739288	128739110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128739100_128739300
m54284U_201016_223608/75039712/ccs	chr5	-	2233	12	NNC	ENSMUSG00000029598.13	novel	4208	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	113.942134074079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGAGGGCCTTGAGTCTT	NA	False	NA	-5	True	NA	NA	NA	120641677	120623311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_120623904_120624104_120624268_120624712_120624869_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
m54284U_201016_223608/75236367/ccs	chr12	+	8008	28	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_21	27.6289345558485	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTTTCTTTAGCATGA	NA	False	NA	7	True	AATAAA	-15	NA	4967406	5097394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5063985_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
m54284U_201016_223608/75237230/ccs	chr7	-	1567	10	NIC	ENSMUSG00000000486.14	novel	1486	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	221	junction_9	51.3653099058927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCGGAGTCTTC	NA	False	NA	-7	True	AATAAA	-18	NA	126817643	126813618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126814017_126814120_126814212_126814452_126814619_126814830_126814928_126815039_126815142_126815861_126816208_126816790_126816915_126817142_126817230_126817312_126817404_126817578
m54284U_201016_223608/75301911/ccs	chr11	+	2286	9	NNC	ENSMUSG00000020458.17	novel	4618	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	404.083047621402	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTAGTGTTTTA	NA	False	NA	14	True	AATAAA	-14	NA	29642947	29692916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_29643694_29655534_29655592_29656409_29656440_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
m54284U_201016_223608/7537416/ccs	chr9	+	3085	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	36	junction_1	289.6445393645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAGGGTCCAAGAATC	NA	False	NA	40	True	AATAAA	-42	NA	21458218	21500783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21458527_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
m54284U_201016_223608/75500004/ccs	chr5	-	214	1	Intergenic	novelGene_2914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTATCAGAGGGCTGTG	7282	False	NA	NA	False	NA	NA	NA	125282461	125282247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125282200_125282500
m54284U_201016_223608/75565552/ccs	chr2	-	2155	10	NNC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_9	120.630852061717	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279040_26279160
m54284U_201016_223608/75565784/ccs	chr8	-	2244	1	Genic_Genomic	ENSMUSG00000051176.7	novel	NA	NA	NA	NA	10481	851	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCATTTTTATTTCTAG	NA	False	NA	-10	True	CATAAA	-21	NA	43749492	43747248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_-_43747200_43749500
m54284U_201016_223608/75629133/ccs	chr11	+	1864	8	NNC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	2575.49587062217	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557825	95571599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_95557869_95558862_95558978_95560702_95560811_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
m54284U_201016_223608/75629675/ccs	chr2	+	2831	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	342	junction_7	6652.12388056995	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29956467	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960933
m54284U_201016_223608/75694517/ccs	chr10	-	177	1	Intergenic	novelGene_5585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAGAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	121351332	121351155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_121351200_121351300
m54284U_201016_223608/75760421/ccs	chr14	+	3805	12	NIC	ENSMUSG00000035469.18	novel	2163	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	92.2668605389769	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438682	59474714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_59439034_59447465_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
m54284U_201016_223608/75760624/ccs	chr7	+	2031	12	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	0	553	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	88.9139243899021	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTCTGGCTGCCCTTT	6825	False	NA	12	True	AATAAA	-17	NA	140711213	140736068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734850_140734910_140735246
m54284U_201016_223608/75761738/ccs	chr5	+	4088	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_30	29.5591964327517	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278805	138310652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307460_138307534_138309995_138310068_138310297
m54284U_201016_223608/75762371/ccs	chr11	-	1031	4	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	23722	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_3	1285.62574474672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	4724	False	NA	-9	True	AATAAA	-20	NA	88822569	88814845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88822545
m54284U_201016_223608/75891281/ccs	chr13	-	3603	12	NIC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	0	-1579	intron_retention	FALSE	canonical	3	368	junction_4	40.335575831838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTGCTTTGGCAAAGT	NA	False	NA	NA	False	AGTAAA	-15	NA	98399521	98384931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98395798_98395881_98395975_98397306_98397479_98399382
m54284U_201016_223608/75893547/ccs	chr11	+	209	1	Intergenic	novelGene_6340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTTTTTAAAATTTGTTT	NA	False	NA	NA	False	NA	NA	NA	101496427	101496636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101496400_101496600
m54284U_201016_223608/75956224/ccs	chr15	-	192	1	Intergenic	novelGene_7998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATGGCTGGAAATGGC	NA	False	NA	NA	False	NA	NA	NA	101908492	101908300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_101908300_101908500
m54284U_201016_223608/76023125/ccs	chr8	-	201	1	Intergenic	novelGene_4398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCACATGTTTCAGCAA	1926	False	NA	NA	False	TTTAAA	-7	NA	89013753	89013552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_89013600_89013800
m54284U_201016_223608/76023826/ccs	chr5	-	177	1	Intergenic	novelGene_2949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	129982009	129981832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129981800_129982000
m54284U_201016_223608/7604817/ccs	chr13	-	917	4	NNC	ENSMUSG00000061474.12	novel	701	4	NA	NA	-417	0	at_least_one_novel_splicesite	FALSE	canonical	3	219	junction_3	475.847547948804	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTTTTCTGTTTATTT	NA	False	NA	NA	False	AATAAA	-1	NA	100881584	100872462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_100872782_100875521_100875710_100877675_100877740_100881238
m54284U_201016_223608/76088427/ccs	chr18	+	4195	22	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_20	199.165913811801	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
m54284U_201016_223608/76088713/ccs	chr17	-	203	1	Intergenic	novelGene_8750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATAGATACCACTTAC	5394	False	NA	NA	False	NA	NA	NA	81556562	81556359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_81556400_81556600
m54284U_201016_223608/76090034/ccs	chrX	+	4074	10	NIC	ENSMUSG00000031148.15	novel	3579	11	NA	NA	83	0	intron_retention	FALSE	canonical	3	223	junction_8	33.549300373563	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCGCATTTGTGTTATC	NA	False	NA	NA	False	NA	NA	NA	7563452	7576501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
m54284U_201016_223608/76153111/ccs	chr17	-	1971	4	NIC	ENSMUSG00000024114.16	novel	1799	5	NA	NA	0	-56	intron_retention	FALSE	canonical	3	22	junction_1	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTCTGGCTTCGTTCAC	NA	False	NA	-35	True	NA	NA	NA	24063146	24060081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24061500_24062415_24062846_24062930_24062958_24063050
m54284U_201016_223608/76220118/ccs	chr10	-	191	1	Intergenic	novelGene_5499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGCACCTGGATAAGAA	NA	False	NA	NA	False	NA	NA	NA	90964519	90964328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_90964300_90964500
m54284U_201016_223608/76220697/ccs	chr9	+	186	1	Intergenic	novelGene_4769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTTTGTTAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	53535197	53535383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_53535200_53535400
m54284U_201016_223608/76284851/ccs	chr2	+	2263	5	NIC	ENSMUSG00000026811.19	novel	2536	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	26.3569250862084	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	3354	False	NA	7	True	AATAAA	-16	NA	32497022	32510818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509351
m54284U_201016_223608/76351887/ccs	chr8	+	1624	9	NIC	ENSMUSG00000118664.1	novel	2747	10	NA	NA	0	179	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	47.9785108147387	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTTTTGTTATTCTT	NA	False	NA	17	True	TATAAA	-17	NA	39472998	39618334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39593682_39593747_39597896_39597972_39610300_39610392_39617866
m54284U_201016_223608/76483068/ccs	chr6	-	2787	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1123	junction_1	277.297323383324	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942501	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124939410_124939584_124939661_124941686_124941892_124942364
m54284U_201016_223608/76548014/ccs	chrX	+	4215	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_9	192.349219447915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158374327_158374354_158375066
m54284U_201016_223608/76548091/ccs	chr11	-	1897	5	NIC	ENSMUSG00000020553.9	novel	2723	6	NA	NA	0	-758	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	18.1435250158287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTGTCTCCCTCT	NA	False	NA	-7	True	AATAAA	-19	NA	89893720	89874248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_89875583_89878021_89878194_89879520_89879601_89881896_89882015_89893527
m54284U_201016_223608/7667855/ccs	chrX	-	3232	1	FSM	ENSMUSG00000083327.2	ENSMUST00000120233.2	2406	1	-254	-572	-254	572	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAAGAACAAATAAAAAA	NA	False	NA	NA	False	AATAAA	-28	NA	103392094	103388862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_103388900_103392100
m54284U_201016_223608/76679037/ccs	chr10	-	2478	4	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	178	0	intron_retention	FALSE	canonical	3	762	junction_1	9.0921211313239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755422	5749159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_5749823_5750255_5751243_5751868_5752533_5755258
m54284U_201016_223608/76679270/ccs	chr13	-	187	1	Intergenic	novelGene_7060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTATTCTCCTGGT	7807	False	NA	NA	False	NA	NA	NA	49176164	49175977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_49176000_49176200
m54284U_201016_223608/7667966/ccs	chr5	+	3069	11	NIC	ENSMUSG00000044017.17	novel	5163	26	NA	NA	65837	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	16.6180624622728	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTTGAGCGTCACA	4621	False	NA	29	True	AATAAA	-17	NA	129239657	129281663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129239733_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
m54284U_201016_223608/76743063/ccs	chr5	+	2963	20	NNC	ENSMUSG00000029599.14	novel	4322	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_12	124.927059050882	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGAGTGTGGCTTCCT	NA	False	NA	27	True	AATAAA	-18	NA	120751191	120765692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761642_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
m54284U_201016_223608/76808859/ccs	chr11	+	3983	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	110.839732411224	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCCCCTCTCATTCCT	3585	False	NA	17	True	ATTAAA	-14	NA	59553332	59667049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
m54284U_201016_223608/76810576/ccs	chr17	-	158	1	Intergenic	novelGene_8499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3226	False	NA	NA	False	NA	NA	NA	29849529	29849371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29849400_29849500
m54284U_201016_223608/76810979/ccs	chr7	+	4079	7	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	76.9518247563587	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248708	41277957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_41248825_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
m54284U_201016_223608/76942093/ccs	chr8	+	2178	17	NNC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	74	junction_1	296.727140810796	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAGACATTTTAAATTA	NA	False	NA	12	True	AATAAA	-17	NA	107620282	107649720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_107620345_107621276_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
m54284U_201016_223608/77006140/ccs	chr4	+	1733	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-20	0	at_least_one_novel_splicesite	TRUE	canonical	3	89	junction_2	238.585938395371	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407541	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_117407928_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
m54284U_201016_223608/77071371/ccs	chr1	-	3905	8	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	8.71311467541538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTATTAAGAAAATACCA	NA	False	NA	NA	False	ATTAAA	-38	NA	64995934	64832967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64976855_64977699_64995773
m54284U_201016_223608/77071673/ccs	chr16	+	190	1	Intergenic	novelGene_8189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAAGGGGGCGGGGTT	NA	False	NA	NA	False	NA	NA	NA	31121653	31121843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31121700_31121800
m54284U_201016_223608/77072195/ccs	chr2	-	2656	18	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	0	-502	at_least_one_novel_splicesite	FALSE	canonical	2	65	junction_17	156.356305014051	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGTACTGCCTGGTTC	NA	False	NA	-5	True	AATAAA	-15	NA	37593360	37473669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593262
m54284U_201016_223608/77073037/ccs	chr3	-	3290	4	NIC	ENSMUSG00000028133.18	novel	1484	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	77	junction_3	12.657891697365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTCATGTTTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	120965344	120949491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_120949707_120949835_120949952_120950049_120952905_120965240
m54284U_201016_223608/77136099/ccs	chr3	+	197	1	Intergenic	novelGene_1570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGGGATTAAAGGCGTG	737	False	NA	NA	False	NA	NA	NA	95555214	95555411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95555200_95555400
m54284U_201016_223608/77137094/ccs	chr9	-	6560	50	NIC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	27	junction_27	45.6108432419436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6256	False	NA	NA	False	TTTAAA	-18	NA	21763931	21711475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
m54284U_201016_223608/7735784/ccs	chr15	+	3790	1	Intergenic	novelGene_7707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAACCCATAGACTA	NA	False	NA	NA	False	NA	NA	NA	50655025	50658815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_50655000_50658800
m54284U_201016_223608/77463673/ccs	chr7	+	2402	7	NIC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	6684	junction_1	724.883132343108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495266	46505051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46501419_46503406_46503531_46504400
m54284U_201016_223608/77464794/ccs	chr17	+	3398	17	NIC	ENSMUSG00000001228.15	novel	529	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	688.208816421295	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1506	False	NA	36	True	AATAAA	-20	NA	56611406	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56611484_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201016_223608/77529947/ccs	chr4	+	4546	8	NIC	ENSMUSG00000028488.16	novel	2822	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	246	junction_4	16.9957977999605	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGGCTTCTGCTTCTTCC	NA	False	NA	28	True	AATAAA	-18	NA	85123677	85307617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_85123859_85265360_85265430_85273563_85273637_85294577_85294722_85295630_85297648_85299641_85299746_85304026_85304158_85305790
m54284U_201016_223608/77595125/ccs	chr18	-	4928	4	NIC	ENSMUSG00000047466.11	novel	1606	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_3	66.9178600972864	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGACTCTTTCTGAG	NA	False	NA	-8	True	AATAAA	-15	NA	77802186	77719192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77802002
m54284U_201016_223608/77660738/ccs	chr8	+	1254	4	NIC	ENSMUSG00000071078.7	novel	1161	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	279.964680312039	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCCCATTTGTGGTAC	447	False	NA	19	True	NA	NA	NA	70583982	70586399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70584250_70584567_70584659_70585061_70585305_70585746
m54284U_201016_223608/77661039/ccs	chr2	+	3604	20	NIC	ENSMUSG00000026790.20	novel	553	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	330.859302599071	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6629	False	NA	14	True	AATAAA	-14	NA	29779232	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779291_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201016_223608/77726552/ccs	chr3	-	2777	7	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	65.3667006629182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489932	84403399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84441893_84442003_84455240_84455343_84489720
m54284U_201016_223608/77793180/ccs	chr10	-	996	4	NIC	ENSMUSG00000040415.16	novel	1944	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	54.0760780957922	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTCTTCTGTT	NA	False	NA	0	True	AATAAA	-25	NA	127031597	127026246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_127026909_127029598_127029673_127030278_127030504_127031562
m54284U_201016_223608/77857907/ccs	chr8	+	3910	4	ISM	ENSMUSG00000013033.17	ENSMUST00000132500.8	5719	22	-20	13665	0	-3730	5prime_fragment	FALSE	canonical	3	58	junction_1	10.6562449087639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCGTACCATACTCATGT	3682	False	NA	NA	False	NA	NA	NA	84627343	84652951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627
m54284U_201016_223608/77858044/ccs	chr9	+	4109	22	NIC	ENSMUSG00000057193.9	novel	3478	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_21	46.6520385236562	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	6630	False	NA	19	True	AATAAA	-19	NA	21232043	21266324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
m54284U_201016_223608/77924720/ccs	chr4	-	2672	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_18	121.172155869344	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980882	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980724
m54284U_201016_223608/77924750/ccs	chr2	+	4713	26	NIC	ENSMUSG00000035437.16	novel	4847	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	48.8404094986928	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCTTCATACAAAAGTA	NA	False	NA	7	True	ATTAAA	-18	NA	37342256	37456449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_37342314_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
m54284U_201016_223608/77989860/ccs	chr8	-	170	1	Intergenic	novelGene_4557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCTATATGTTAGCACAT	NA	False	NA	NA	False	AATAAA	-15	NA	121726620	121726450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_121726400_121726600
m54284U_201016_223608/77990419/ccs	chr3	+	2108	11	NNC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	138.424166965165	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4481	False	NA	45	True	AATAAA	-31	NA	95222557	95230910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_95222657_95227372_95227547_95227897_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
m54284U_201016_223608/7800864/ccs	chr13	-	1967	9	NNC	ENSMUSG00000021557.16	novel	4143	25	NA	NA	-3318	0	intron_retention	FALSE	canonical	2	7	junction_8	8.08451451851006	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTCTTGTCATCTTT	NA	False	NA	-3	True	AATAAA	-17	NA	59625713	59597350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59625604
m54284U_201016_223608/78054217/ccs	chr8	+	6588	38	NIC	ENSMUSG00000031592.11	novel	6484	39	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	32	junction_10	42.5841838011169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTTTGGGAAATGTT	NA	False	NA	8	True	AATAAA	-20	NA	41692788	41785381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
m54284U_201016_223608/78120252/ccs	chr2	-	183	1	Intergenic	novelGene_716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAACAGAAACT	NA	False	NA	NA	False	NA	NA	NA	32264003	32263820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32263800_32264000
m54284U_201016_223608/78121611/ccs	chr1	-	1373	10	NNC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	77.6737399417796	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813869	194786103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813767
m54284U_201016_223608/78185663/ccs	chr11	-	196	1	Intergenic	novelGene_6464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACTTTCTGTGGCACCAA	NA	False	NA	NA	False	NA	NA	NA	115981384	115981188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115981200_115981400
m54284U_201016_223608/78185962/ccs	chr8	-	4295	24	NNC	ENSMUSG00000031835.17	novel	4336	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_23	138.535194084391	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8141	False	NA	-7	True	AATAAA	-14	NA	120285474	120234894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276397_120285384
m54284U_201016_223608/78252579/ccs	chr13	+	233	1	Intergenic	novelGene_6978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTTTATAAGGCAAATG	8752	False	NA	NA	False	AATAAA	-24	NA	18726435	18726668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_18726400_18726700
m54284U_201016_223608/78315835/ccs	chr16	+	5389	32	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_2	368.433034817239	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201016_223608/78382991/ccs	chr17	-	3212	14	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	514.328861250069	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5740	False	NA	-5	True	AATAAA	-16	NA	33904393	33865209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
m54284U_201016_223608/78447888/ccs	chr4	+	2460	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	0	1083	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	83.5886090059857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTGTTGGTTATTTA	NA	False	NA	21	True	TTTAAA	-30	NA	62327033	62342651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_62327139_62327811_62327990_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
m54284U_201016_223608/78513933/ccs	chr14	+	2215	5	NNC	ENSMUSG00000021806.5	novel	3976	17	NA	NA	0	-35612	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	630.287434429721	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGCTTTTCGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	19801351	19820586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19819923
m54284U_201016_223608/78578730/ccs	chr4	-	181	1	Intergenic	novelGene_1909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTTTGTTGTATGGTGC	NA	False	NA	NA	False	NA	NA	NA	79769352	79769171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_79769200_79769400
m54284U_201016_223608/78578759/ccs	chr17	+	2440	5	NIC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_2	109.005733794145	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	879	False	NA	35	True	AGTAAA	-19	NA	23819829	23829993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_23819934_23824478_23824939_23826553_23826619_23827081_23827140_23828240
m54284U_201016_223608/7864371/ccs	chr2	+	3785	10	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	543	junction_4	42.3559286447367	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174267047_174267705_174267821_174268109_174268423_174268609_174268740_174268823
m54284U_201016_223608/78644688/ccs	chr10	-	3894	5	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	194	junction_2	17.5926120857592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5056	False	NA	-3	True	ATTAAA	-17	NA	75768336	75759055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75764344_75768167
m54284U_201016_223608/786745/ccs	chr11	+	3375	12	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	143.003149708132	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742790	45801452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_45742997_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
m54284U_201016_223608/78776750/ccs	chr17	-	186	1	Intergenic	novelGene_8513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGCCATGTCTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	31888120	31887934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_31887900_31888100
m54284U_201016_223608/78776798/ccs	chr10	+	2300	7	NNC	ENSMUSG00000035873.9	novel	870	5	NA	NA	218	589	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	264.853838098593	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCTTGGTATTTAGG	5816	False	NA	12	True	AATAAA	-14	NA	108168199	108250690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_108168294_108168548_108169173_108218590_108218723_108227558_108227594_108245323_108245472_108247824_108247930_108249528
m54284U_201016_223608/78971372/ccs	chr6	+	2645	22	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	62	junction_6	55.816430581886	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	124	False	NA	NA	False	AATAAA	-22	NA	49372488	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
m54284U_201016_223608/78973399/ccs	chr16	+	2393	15	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_5	115.876605728258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688630	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_16688694_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
m54284U_201016_223608/79036747/ccs	chr4	+	3306	20	ISM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	64	221970	0	0	5prime_fragment	FALSE	canonical	2	11	junction_1	4.26088308379139	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTCTTTTAAATTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	98284091	98385870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110
m54284U_201016_223608/79036916/ccs	chr4	+	2750	20	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	-223	0	at_least_one_novel_splicesite	TRUE	canonical	2	11	junction_7	153.380449624031	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3724	False	NA	23	True	ATTAAA	-28	NA	155709087	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155709399_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724056_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201016_223608/79102969/ccs	chr11	-	3992	15	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	135.088576383748	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5020	False	NA	-12	True	AATAAA	-12	NA	120042148	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
m54284U_201016_223608/79104785/ccs	chr7	-	1428	11	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	0	-614	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_9	800.001531248535	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654859	59632863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59652693_59652811_59654783
m54284U_201016_223608/79167833/ccs	chr13	-	3235	11	NIC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	47	junction_5	140.407300380002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGCTTAAAAACAATTT	NA	False	NA	-15	True	AATAAA	-17	NA	65260789	65212959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
m54284U_201016_223608/79168708/ccs	chr3	+	2739	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	217.542583211205	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754197_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201016_223608/7932322/ccs	chr15	+	5253	26	NIC	ENSMUSG00000037386.17	novel	4760	26	NA	NA	0	-50	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	11.0478233150245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGATTAGCTGAATAT	NA	False	NA	7	True	ATTAAA	-18	NA	39061655	39545799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374659_39374771_39398233_39398414_39399267_39399378_39430338_39430440_39448985_39449159_39479664_39479907_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
m54284U_201016_223608/79430521/ccs	chr3	+	182	1	Intergenic	novelGene_1342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAATTTATGAAATTTT	NA	False	NA	NA	False	NA	NA	NA	9110235	9110417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_9110200_9110400
m54284U_201016_223608/79431452/ccs	chr5	+	3958	15	NIC	ENSMUSG00000029106.15	novel	3761	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	135.779157427923	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731112	34789652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
m54284U_201016_223608/79432135/ccs	chr13	+	2519	12	NIC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	69.776028941722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370447	84443989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
m54284U_201016_223608/79495979/ccs	chr3	+	2448	9	NIC	ENSMUSG00000025762.17	novel	2497	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	22.2920950114609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTTTTTAAGGGCTT	NA	False	NA	13	True	AATAAA	-26	NA	40904262	40932228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_40905120_40916042_40916102_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
m54284U_201016_223608/79496922/ccs	chr12	-	191	1	Intergenic	novelGene_6753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGCCTGGCCTTAGAC	NA	False	NA	NA	False	NA	NA	NA	80419828	80419637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80419600_80419800
m54284U_201016_223608/79497579/ccs	chr19	+	1522	6	NNC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	0	-155	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	270.070064983145	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACGCCTCTTTTGTAT	NA	False	NA	22	True	ATTAAA	-16	NA	37184941	37199221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_37185304_37188069_37188273_37194581_37194755_37197701_37197886_37198037_37198205_37198788
m54284U_201016_223608/79627106/ccs	chr7	-	4109	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	0	1644	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	46.6491038380041	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713540	27686492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713440
m54284U_201016_223608/79627276/ccs	chr10	-	3021	7	NIC	ENSMUSG00000000901.18	novel	2288	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	194	junction_2	15.0489940601431	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCCTGTCTGTTTTTCTTT	5056	False	NA	-3	True	ATTAAA	-17	NA	75768336	75759055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_75759950_75761253_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
m54284U_201016_223608/79627362/ccs	chr2	+	2435	10	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	503.918644227419	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8663	False	NA	NA	False	AATAAA	-16	NA	72306596	72317237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_72306656_72309249_72309373_72309957_72310063_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
m54284U_201016_223608/79628779/ccs	chr2	+	1913	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	27.6450718935582	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	1945	False	NA	NA	False	AATAAA	-15	NA	122016752	122036878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_122016834_122016944_122017027_122023712_122023787_122028866_122028956_122035291
m54284U_201016_223608/79889864/ccs	chr7	+	3089	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	0	intron_retention	FALSE	canonical	3	3307	junction_6	367.95050391776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758305	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201016_223608/7996286/ccs	chr15	-	4110	31	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	0	-231	combination_of_known_junctions	FALSE	canonical	1	6	junction_30	42.3057784337895	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1656	False	NA	-10	True	ATTAAA	-18	NA	73295061	73077181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73294857
m54284U_201016_223608/7996395/ccs	chr13	+	2181	7	NIC	ENSMUSG00000041112.18	novel	3748	5	NA	NA	357	-1825	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	14.4308696896618	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGGTGTTTTGATT	NA	False	NA	8	True	AATAAA	-18	NA	20657252	20790698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_20657458_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
m54284U_201016_223608/7996412/ccs	chr13	-	183	1	Intergenic	novelGene_7120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTTTCAAAAAGAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	58302456	58302273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58302300_58302500
m54284U_201016_223608/7996777/ccs	chr12	+	2653	7	NIC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	19.6694913225759	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	4871	False	NA	NA	False	NA	NA	NA	108860218	108994378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_108860257_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
m54284U_201016_223608/7997478/ccs	chr7	-	3812	11	NIC	ENSMUSG00000044465.20	novel	3414	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	83	junction_4	99.153466908626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049261	105027816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105039100_105039227_105039560_105049090
m54284U_201016_223608/7997915/ccs	chr9	+	2600	10	NNC	ENSMUSG00000037257.9	novel	5294	10	NA	NA	0	1569	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_6	67.8911619914051	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATGTGTTTTGTTCTG	9214	False	NA	NA	False	ATTAAA	-22	NA	63509941	63549179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
m54284U_201016_223608/80020966/ccs	chr3	+	488	1	Intergenic	novelGene_1338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGATGCAGAAAAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	5925398	5925886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_5925400_5925900
m54284U_201016_223608/80021116/ccs	chr17	+	4704	24	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	37.0128981759057	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
m54284U_201016_223608/80086678/ccs	chr13	-	1965	1	Intergenic	novelGene_7000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGCTTTCACACATAC	NA	False	NA	NA	False	NA	NA	NA	25377804	25375839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_25375800_25377800
m54284U_201016_223608/80151444/ccs	chr14	-	4848	1	Antisense	novelGene_ENSMUSG00000037536.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGCCAACTAAATTAT	8253	False	NA	NA	False	NA	NA	NA	47715790	47710942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_-_47710900_47715800
m54284U_201016_223608/80151996/ccs	chr7	-	3511	24	Fusion	ENSMUSG00000052296.8_ENSMUSG00000045282.8	novel	2731	7	NA	NA	0	657	multi-exon	FALSE	canonical	2	11	junction_1	66.4640841368572	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGGTGTGGGAGAGATT	NA	False	NA	NA	False	NA	NA	NA	4662018	4633836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_-_4634236_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
m54284U_201016_223608/80216724/ccs	chr5	+	4156	34	NIC	ENSMUSG00000036928.15	novel	4123	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	29	junction_1	25.0320272353535	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278805	138310652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_138278883_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299043_138299122_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
m54284U_201016_223608/80217024/ccs	chr6	-	1817	6	NIC	ENSMUSG00000032641.19	novel	2075	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	28.4422221354099	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTCCTGTGGATTTTGT	NA	False	NA	-3	True	ACTAAA	-34	NA	134874888	134846055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_134847407_134854179_134854298_134863853_134863900_134864592_134864749_134874124_134874177_134874794
m54284U_201016_223608/80217722/ccs	chr9	+	2912	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_5	202.631290772181	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	15	True	AATAAA	-18	NA	44953914	44965313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963178
m54284U_201016_223608/80218654/ccs	chr12	+	175	1	Intergenic	novelGene_6870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTATTTGTATGT	NA	False	NA	NA	False	NA	NA	NA	105046348	105046523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105046300_105046500
m54284U_201016_223608/80282936/ccs	chr5	+	3834	14	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_3	632.644950296843	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201016_223608/80283384/ccs	chr15	+	178	1	Intergenic	novelGene_7835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTTGTATT	NA	False	NA	NA	False	NA	NA	NA	81287281	81287459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81287300_81287500
m54284U_201016_223608/80347936/ccs	chr19	+	181	1	Intergenic	novelGene_9200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTAGCTCATTAA	NA	False	NA	2	True	NA	NA	NA	28638109	28638290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_28638100_28638300
m54284U_201016_223608/80348160/ccs	chr11	-	1795	13	NIC	ENSMUSG00000064090.15	novel	1889	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	30.8175635348128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTTTAAGCATTCC	NA	False	NA	-7	True	AATAAA	-28	NA	26543622	26421403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543385
m54284U_201016_223608/80414834/ccs	chr11	-	1544	9	NIC	ENSMUSG00000025140.16	novel	1861	8	NA	NA	0	-1056	combination_of_known_junctions	FALSE	canonical	2	46	junction_1	319.603269695415	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTAGACTACTTCCTGCT	NA	False	NA	-10	True	NA	NA	NA	120534574	120527593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120528061_120531025_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
m54284U_201016_223608/80415284/ccs	chr18	+	643	2	Intergenic	novelGene_8833	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	NA	False	NA	15	True	NA	NA	NA	20895474	20911828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_20895821_20911531
m54284U_201016_223608/80478546/ccs	chr8	+	3210	16	NNC	ENSMUSG00000061048.9	novel	4384	16	NA	NA	0	-1171	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	12.1039938312388	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCTAGGGGAGTGGATT	NA	False	NA	8	True	ATTAAA	-22	NA	107237522	107282758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_107237639_107237855_107237974_107262042_107262114_107263192_107263319_107263447_107263604_107263705_107263851_107265625_107265802_107266426_107266556_107267938_107268125_107270282_107270525_107270748_107270895_107271634_107271860_107274253_107274464_107279020_107279152_107279497_107279645_107281872
m54284U_201016_223608/80480448/ccs	chr2	+	1314	10	NNC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_7	729.37377164622	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813387	179818079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817075_179817390_179817549_179817646_179817750_179817866
m54284U_201016_223608/80546472/ccs	chr11	-	3412	10	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	0	-108	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	72.4284235863924	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTTGTAATCTGATTTT	NA	False	NA	-15	True	AATAAA	-16	NA	65679123	65579176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65678961
m54284U_201016_223608/80612166/ccs	chr16	+	208	1	Intergenic	novelGene_8138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTTGCAATCCTGGAAT	NA	False	NA	NA	False	NA	NA	NA	20278760	20278968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_20278800_20279000
m54284U_201016_223608/8062557/ccs	chr17	-	1675	1	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	1743	224	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTGTAAAGTTTTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	95055577	95053902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_95053900_95055600
m54284U_201016_223608/80806249/ccs	chr9	-	4082	27	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	0	579	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	218.671323975034	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTTTCAGGCAATTTTAA	8293	False	NA	-18	True	AATAAA	-16	NA	95393947	95342451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
m54284U_201016_223608/80871715/ccs	chr1	+	3234	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	0	-460	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	61.1349685123007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATTCCAGTTGTTT	NA	False	NA	22	True	AATAAA	-22	NA	190661049	190678699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_190661297_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
m54284U_201016_223608/80937938/ccs	chr7	-	5294	21	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	-569	combination_of_known_junctions	TRUE	canonical	3	18	junction_15	19.5153144991312	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTTGAACTGTATATA	3690	False	NA	-2	True	TATAAA	-19	NA	98305802	98238711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
m54284U_201016_223608/80939027/ccs	chr4	+	208	1	Intergenic	novelGene_1853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTCACTCACAGCAAATC	NA	False	NA	NA	False	TTTAAA	-14	NA	46645173	46645381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_46645200_46645400
m54284U_201016_223608/80939145/ccs	chr18	-	3988	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	77.8143613347303	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681766	62637225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
m54284U_201016_223608/81069296/ccs	chr6	+	2880	5	NNC	ENSMUSG00000042097.18	novel	2812	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	9.98436277385793	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTCCAATGTGTTCATTT	NA	False	NA	12	True	TTTAAA	-6	NA	117840044	117849726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_117840104_117843355_117843536_117846178_117846235_117846362_117846438_117847216
m54284U_201016_223608/81070014/ccs	chr10	+	199	1	Intergenic	novelGene_5264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGGCATTTTAAAGTG	NA	False	NA	NA	False	NA	NA	NA	39777079	39777278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_39777100_39777300
m54284U_201016_223608/81134163/ccs	chr14	-	189	1	Intergenic	novelGene_7550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTGCATCCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77229697	77229508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_77229500_77229700
m54284U_201016_223608/81266409/ccs	chr8	-	2461	11	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	245.924866575139	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAGTGTTGGTCAAAT	NA	False	NA	-16	True	AATAAA	-17	NA	110419892	110397959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110399274_110402007_110402057_110402274_110402435_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201016_223608/8127352/ccs	chr11	-	3074	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	16	junction_4	21.8274483162829	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269590	120260387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269367
m54284U_201016_223608/8127767/ccs	chr19	+	1943	7	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-56	566	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	440.453554115906	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTCGAATTAGAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	18648186	18682152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18681383
m54284U_201016_223608/8128184/ccs	chr5	+	8175	14	NNC	ENSMUSG00000038970.8	novel	8114	14	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	16.0413666433687	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTGCTACATTTACT	NA	False	NA	NA	False	AATAAA	-23	NA	144037189	144125022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_144037595_144066170_144066296_144070953_144071099_144080346_144080418_144084413_144084533_144085095_144085184_144093678_144093813_144101423_144101509_144103115_144103238_144108554_144108705_144110426_144113296_144119554_144119688_144119999_144120240_144121533
m54284U_201016_223608/81463125/ccs	chr17	-	2984	18	NIC	ENSMUSG00000025733.18	novel	3189	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	133	junction_17	11.5985323018515	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTGCTGTTTTTGTGT	5969	False	NA	0	True	NA	NA	NA	26063543	26057430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
m54284U_201016_223608/81529032/ccs	chr2	+	193	1	Intergenic	novelGene_643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTACTTTGGTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	26123517	26123710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_26123500_26123700
m54284U_201016_223608/81529159/ccs	chr9	-	3941	6	NIC	ENSMUSG00000032470.18	novel	4701	6	NA	NA	-239	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_5	168.084978507896	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTTATTTCCTCTTC	2311	False	NA	-4	True	NA	NA	NA	99302444	99267472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99302132
m54284U_201016_223608/81594533/ccs	chr10	+	2394	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	44.1832547465666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGTTGTGAGACAC	NA	False	NA	16	True	ATTAAA	-18	NA	76869101	76886265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_76869285_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
m54284U_201016_223608/81594696/ccs	chr12	+	2015	10	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.7317782101372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1849	False	NA	11	True	AATAAA	-16	NA	84363891	84390497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_84363949_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
m54284U_201016_223608/81658184/ccs	chr18	+	2149	6	NIC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	0	943	combination_of_known_splicesites	FALSE	canonical	2	125	junction_2	359.805169501496	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTGTCTTGTCTGTC	7	True	NA	19	True	ATTAAA	-16	NA	6765202	6790183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_6765333_6770053_6770110_6783119_6783193_6784569_6784689_6784938_6785006_6788479
m54284U_201016_223608/81660248/ccs	chr17	-	399	1	FSM	ENSMUSG00000049124.5	ENSMUST00000053575.5	231	1	-36	-132	-36	132	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATCAAGGGCTG	NA	False	NA	NA	False	AATAAA	-28	NA	26318231	26317832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_26317800_26318200
m54284U_201016_223608/81725798/ccs	chr4	-	1860	8	NIC	ENSMUSG00000028975.17	novel	2006	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	146.864785793336	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGCTCTGACCTCGTC	NA	False	NA	-12	True	AATAAA	-20	NA	149184273	149044991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149068493_149068623_149126177_149126263_149160476_149160525_149184228
m54284U_201016_223608/81789901/ccs	chr2	+	2678	1	Intergenic	novelGene_1275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	NA	False	NA	NA	False	AAAAAG	-29	NA	168847610	168850288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168847600_168850300
m54284U_201016_223608/81854788/ccs	chr11	-	3234	2	Intergenic	novelGene_5854	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450922	57445632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57446486_57448541
m54284U_201016_223608/81854905/ccs	chr9	-	217	1	Intergenic	novelGene_5162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAAGACAATTTCTACGT	NA	False	NA	NA	False	TTTAAA	-11	NA	122601923	122601706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_122601700_122601900
m54284U_201016_223608/81855083/ccs	chr16	+	2948	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	108.44980917969	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688630	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_16688694_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
m54284U_201016_223608/81856298/ccs	chr11	+	98	2	Intergenic	novelGene_6389	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	320	junction_1	0	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAACCCCGCTGGTGTCT	4511	False	NA	17	True	AATAAA	-7	NA	106391740	106392030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106391767_106391958
m54284U_201016_223608/81857252/ccs	chr18	+	5183	14	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26651	1910	at_least_one_novel_splicesite	FALSE	canonical	3	706	junction_12	216.509206932155	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTCTGACATTGATTT	6434	False	NA	7	True	AATAAA	-18	NA	77126252	77243406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
m54284U_201016_223608/81921664/ccs	chr8	+	4580	32	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	23.8918391755081	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567644	86787270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_86567733_86569654_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
m54284U_201016_223608/81921979/ccs	chr11	-	5258	2	Intergenic	novelGene_5855	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	117	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	57450922	57445632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57448210_57448241
m54284U_201016_223608/81922063/ccs	chr4	-	4785	12	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	684	junction_3	52.9799587868644	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
m54284U_201016_223608/8193266/ccs	chr16	-	4876	15	NIC	ENSMUSG00000033581.18	novel	3899	16	NA	NA	-245	0	intron_retention	FALSE	canonical	3	902	junction_2	83.0511276017272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGGTGTCTTGGTGTCTT	2028	False	NA	NA	False	AATATA	-16	NA	21982294	21877758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
m54284U_201016_223608/8194256/ccs	chr15	-	2230	15	NNC	ENSMUSG00000013611.15	novel	2344	14	NA	NA	-4595	-248	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	8.53444401785363	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATAATCATCTCGCCAA	NA	False	NA	NA	False	NA	NA	NA	36560313	36504805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_36505620_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36556627_36556725_36560155
m54284U_201016_223608/8194273/ccs	chr9	+	4322	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	66.4161961505709	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATT	NA	False	NA	17	True	AATAAA	-20	NA	102595683	102610617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_102595913_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
m54284U_201016_223608/8194351/ccs	chr7	+	7364	28	NIC	ENSMUSG00000059263.10	novel	5540	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	115	junction_12	66.4543739225875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTATCTTAGTCATT	NA	False	NA	4	True	AATAAA	-16	NA	111622710	111710591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
m54284U_201016_223608/81986157/ccs	chr4	+	5247	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	0	0	intron_retention	FALSE	canonical	1	26	junction_4	21.999842171151	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126450787	126487696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
m54284U_201016_223608/81987411/ccs	chr18	-	3520	8	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_4	46.2782180878624	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602519_70602849_70604743_70605051_70605361
m54284U_201016_223608/81987585/ccs	chrX	+	4033	17	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_9	15.57040461902	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGGTGTATGTCTCTT	NA	False	NA	19	True	AATAAA	-30	NA	55500216	55553203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
m54284U_201016_223608/82117794/ccs	chr19	+	4294	16	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	70.764272215732	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2523	False	NA	8	True	AATAAA	-17	NA	53131226	53235518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_53131521_53191844_53191907_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
m54284U_201016_223608/82119253/ccs	chr4	-	1536	8	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	262	junction_2	3531.96674123986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_119135565_119136130_119136409_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
m54284U_201016_223608/82249926/ccs	chr2	-	2521	16	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-161	650	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	61.7638513479635	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATATTTTATAGAAGTA	NA	False	NA	-15	True	NA	NA	NA	91536240	91505977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
m54284U_201016_223608/82314504/ccschrUn	chrUn_JH584304v1	-	2742	5	Intergenic	novelGene_9763	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	340.077197118537	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59020	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563
m54284U_201016_223608/82380483/ccs	chr2	+	2101	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	34.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAACT	3373	False	NA	NA	False	NA	NA	NA	91541197	91551890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_91541321_91542424_91543211_91550698
m54284U_201016_223608/82445139/ccs	chr17	+	3441	3	NIC	ENSMUSG00000096910.3	novel	5788	4	NA	NA	0	490	intron_retention	FALSE	canonical	3	48	junction_2	25	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACATAAAATATAGTCG	NA	False	NA	-6	True	AATAAA	-13	NA	33508517	33523631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_33508644_33519554_33519977_33520738
m54284U_201016_223608/82446880/ccs	chr16	+	217	1	Intergenic	novelGene_8287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGCAATACCACCAGCAA	NA	False	NA	NA	False	AAAAAG	-18	NA	58635193	58635410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_58635200_58635400
m54284U_201016_223608/82511011/ccs	chr2	+	1327	6	NIC	ENSMUSG00000014873.16	novel	1203	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	113.91821627817	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATATGTGTATCATTGTT	NA	False	NA	37	True	CATAAA	-32	NA	26806378	26810195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809614
m54284U_201016_223608/82511976/ccs	chr3	+	190	1	Intergenic	novelGene_1622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTAAGAAAA	8823	False	NA	NA	False	NA	NA	NA	107342618	107342808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_107342600_107342800
m54284U_201016_223608/82576301/ccs	chrX	-	7703	39	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	42	junction_7	32.9462859247091	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGTATATTGTTACTT	NA	False	NA	1	True	AATAAA	-26	NA	41000778	40883867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901453_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
m54284U_201016_223608/8258755/ccs	chr8	-	173	1	Intergenic	novelGene_4495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGGGCTGGCATAGAA	NA	False	NA	NA	False	NA	NA	NA	111837777	111837604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_111837600_111837800
m54284U_201016_223608/82641529/ccs	chr8	+	654	4	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	212.071266847308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATTTGAAGTCAAT	NA	False	NA	2	True	AATAAA	-20	NA	80438448	80501971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80501560
m54284U_201016_223608/82642619/ccs	chr8	+	1869	10	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2216	junction_5	100.447885880081	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441896	84449904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
m54284U_201016_223608/82708500/ccs	chr14	+	6230	20	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	0	0	intron_retention	FALSE	canonical	2	32	junction_2	233.021083777337	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395884	34469940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_34396318_34398910_34399207_34399327_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
m54284U_201016_223608/82774068/ccs	chr4	+	3504	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	555	junction_19	264.570952206992	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	591	False	NA	8	True	AATAAA	-20	NA	137321538	137383642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201016_223608/82969697/ccs	chr15	-	2392	8	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	16287	junction_7	5307.90272968101	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964754_79965096_79965985_79966590_79966784_79967524
m54284U_201016_223608/83035349/ccs	chr16	-	1790	17	NIC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	137.923835412883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGTAGAGTATGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	35311243	35217681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230806_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
m54284U_201016_223608/83036695/ccs	chr3	-	2316	17	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	10	junction_14	185.097904836873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662195	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658149_95658297_95660318_95660443_95661630_95661828_95662069
m54284U_201016_223608/83102250/ccs	chr1	+	645	3	NNC	ENSMUSG00000058267.14	novel	674	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	138	junction_1	1309.5	127	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGGTCTTTCCTTCAAGT	NA	False	NA	17	True	AATAAA	-17	NA	160022784	160027390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_160022882_160024519_160024675_160026997
m54284U_201016_223608/83232003/ccs	chr11	-	4319	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	-147	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	64.7674017274941	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAATAGAAGTGATT	NA	False	NA	NA	False	NA	NA	NA	86435631	86389843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
m54284U_201016_223608/83233575/ccs	chr16	-	3773	11	NIC	ENSMUSG00000013089.16	novel	3975	13	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_8	436.265240421467	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCAACCTGCCTCTTT	7589	False	NA	-13	True	AATAAA	-22	NA	22258366	22200058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254950_22255039_22255187_22255311_22258266
m54284U_201016_223608/8324201/ccs	chr11	+	187	1	Intergenic	novelGene_6253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATTTTACCTCTGTAAC	NA	False	NA	NA	False	NA	NA	NA	96669311	96669498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_96669300_96669500
m54284U_201016_223608/83297665/ccs	chr7	+	3254	22	NNC	ENSMUSG00000002957.12	novel	4646	22	NA	NA	0	-1360	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_7	117.945873284924	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGTGGAAATTTTGTTC	9631	False	NA	36	True	ATTAAA	-20	NA	141142120	141211564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
m54284U_201016_223608/83298087/ccs	chr15	+	2904	5	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	290	0	intron_retention	FALSE	canonical	3	800	junction_3	52.4809489243478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88746678	88749929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88748696_88748777
m54284U_201016_223608/83362635/ccs	chr16	-	1836	15	NNC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	0	113	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	1302.26241908583	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292761	87280762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283231_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
m54284U_201016_223608/83364416/ccs	chr13	-	1295	1	FSM	ENSMUSG00000114547.2	ENSMUST00000225150.2	1342	1	215	-168	215	168	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATACATAGCATATTTG	NA	False	NA	NA	False	AGTAAA	-24	NA	112731403	112730108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_112730100_112731400
m54284U_201016_223608/83429168/ccs	chr16	-	5841	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	20.1183995387307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800154	43785395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_43789777_43791761_43791921_43793830_43794530_43799270_43799540_43799821
m54284U_201016_223608/83494087/ccs	chr4	+	2566	10	Fusion	ENSMUSG00000028647.14_ENSMUSG00000028646.17	novel	1685	5	NA	NA	0	0	multi-exon	FALSE	canonical	2	5	junction_4	170.420250347179	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	16	True	AATAAA	-16	NA	123798833	123830786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
m54284U_201016_223608/83495332/ccs	chr6	-	188	1	Intergenic	novelGene_3557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGGCTGGAAGATAAGA	NA	False	NA	NA	False	NA	NA	NA	136862044	136861856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_136861900_136862000
m54284U_201016_223608/83625906/ccs	chr11	-	3549	7	NIC	ENSMUSG00000020696.19	novel	3633	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	63.0204993104096	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2743	False	NA	NA	False	AATAAA	-11	NA	82762036	82694647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82736577_82736722_82761833
m54284U_201016_223608/83626766/ccs	chr5	+	4271	13	NNC	ENSMUSG00000014932.16	novel	2259	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_3	284.416495751487	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768514	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_32768720_32797674_32797948_32802351_32802452_32808293_32808428_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
m54284U_201016_223608/83691866/ccs	chr9	+	2348	1	NIC	ENSMUSG00000032369.14	novel	2302	9	NA	NA	-107	-19393	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	GGGGCT	-22	NA	92132287	92134635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_92132300_92134600
m54284U_201016_223608/83692008/ccs	chr7	+	2957	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	319.250337161573	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648584_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201016_223608/83757315/ccs	chr4	-	3825	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_12	72.017744726946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
m54284U_201016_223608/8390542/ccs	chr17	+	1120	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	141	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	403.460233480327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	21	True	AATAAA	-29	NA	48717260	48724294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_48717401_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
m54284U_201016_223608/8390598/ccs	chr2	+	4290	26	NNC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_20	29.1518507131194	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178324	32197925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195224_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
m54284U_201016_223608/8390874/ccs	chrX	+	9665	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	1034	combination_of_known_junctions	FALSE	canonical	3	36	junction_44	220.868268655245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	823	False	NA	NA	False	AATAGA	-15	NA	12937752	13037171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
m54284U_201016_223608/84019243/ccs	chr11	-	2044	9	NIC	ENSMUSG00000001054.10	novel	1946	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	245	junction_3	13.7380630002923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGATTGCATGGTCTTGT	NA	False	NA	-7	True	AATATA	-21	NA	51526723	51514497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
m54284U_201016_223608/84148905/ccs	chr15	-	1762	17	NIC	ENSMUSG00000022555.13	novel	1888	17	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	48.5218620185788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGGGGTTGTGGAGGC	NA	False	NA	-5	True	AATAAA	-18	NA	76396095	76386214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387202_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
m54284U_201016_223608/84149533/ccs	chr3	+	4973	23	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	273	junction_12	62.2008377345196	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052148	152098970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
m54284U_201016_223608/84214943/ccs	chr4	+	3396	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	755	junction_7	68.3096192467258	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGAAACTAGTCTCTT	9118	False	NA	33	True	TATAAA	-25	NA	152018195	152065684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152063787_152063900_152064044_152064374_152064505_152065159
m54284U_201016_223608/84280680/ccs	chr2	-	4189	12	Fusion	ENSMUSG00000027635.16_ENSMUSG00000082163.3	novel	2080	11	NA	NA	0	914	multi-exon	FALSE	canonical	0	0	junction_10	78.4810341883485	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCTTCATTCAGATT	8134	False	NA	NA	False	AATAAA	-16	NA	156848995	156835178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848179_156848283_156848894
m54284U_201016_223608/84345845/ccs	chr3	+	1670	10	NNC	ENSMUSG00000002228.8	novel	1721	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	22.6949714341098	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTGTGTCATTATTTGC	NA	False	NA	NA	False	AATAAA	-14	NA	104688371	104693334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_104688726_104689916_104690038_104690442_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692559_104692713_104692866_104693017
m54284U_201016_223608/84346993/ccs	chr4	+	5666	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_19	303.200767844182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	570	False	NA	17	True	ATTAAA	-27	NA	137321517	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365075_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201016_223608/84410987/ccs	chr7	-	233	1	Intergenic	novelGene_3663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGCAGCACAATTTATCC	NA	False	NA	NA	False	NA	NA	NA	15595044	15594811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_15594800_15595000
m54284U_201016_223608/84412811/ccs	chr19	-	180	1	Intergenic	novelGene_9092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCCTTCTCAGTTTGTT	9118	False	NA	NA	False	NA	NA	NA	4919132	4918952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4919000_4919100
m54284U_201016_223608/84477533/ccs	chr11	+	2196	14	NIC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_11	142.282700508197	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268545	50277355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274718_50275470_50275564_50275967_50276018_50276603
m54284U_201016_223608/84542297/ccs	chr13	+	5770	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	56	-936	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	41.6980178195876	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTAACCTGTTTTTTT	NA	False	NA	NA	False	ATTAAA	-29	NA	76246908	76337289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259795_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
m54284U_201016_223608/8456204/ccs	chr9	-	4819	14	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	90.4619309253653	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTTGTGTTTCATAA	2246	False	NA	-19	True	AATAAA	-15	NA	70411007	70332711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
m54284U_201016_223608/84607020/ccs	chr1	+	169	1	Intergenic	novelGene_262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACAAGGTGAA	NA	False	NA	NA	False	NA	NA	NA	105418591	105418760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_105418600_105418800
m54284U_201016_223608/84609789/ccs	chr2	+	192	1	Intergenic	novelGene_947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	92141932	92142124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_92141900_92142100
m54284U_201016_223608/84673886/ccs	chr1	-	155	1	Intergenic	novelGene_298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAAATAAAATAT	NA	False	NA	NA	False	NA	NA	NA	131258995	131258840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_131258800_131259000
m54284U_201016_223608/84739753/ccs	chr4	-	4300	8	NIC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_7	68.3591953714841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1188	False	NA	-5	True	AATAAA	-15	NA	129083335	129041797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083164
m54284U_201016_223608/84871286/ccs	chr2	-	1307	8	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	208.37515226541	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186729	50169892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186689
m54284U_201016_223608/84936036/ccs	chr13	-	3139	12	NIC	ENSMUSG00000021711.18	novel	3502	13	NA	NA	-14	-359	combination_of_known_junctions	FALSE	canonical	3	331	junction_5	173.024051258921	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAGTCAAAGACAAAATC	NA	False	NA	NA	False	NA	NA	NA	104314947	104279022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
m54284U_201016_223608/85000624/ccs	chr11	-	1828	8	NNC	ENSMUSG00000020116.8	novel	1544	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	685.118491166875	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCAGTCTCTTTTTCTAA	NA	False	NA	48	True	AGTAAA	-19	NA	17161568	17153197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_17154002_17154500_17154572_17158380_17158665_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
m54284U_201016_223608/8519768/ccs	chr3	+	195	1	Intergenic	novelGene_1597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTCATTGTTGTAAAG	NA	False	NA	NA	False	NA	NA	NA	100754600	100754795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_100754600_100754800
m54284U_201016_223608/85199181/ccs	chr5	-	174	1	Intergenic	novelGene_2900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAGAAAGAAAAC	5526	False	NA	NA	False	NA	NA	NA	124573563	124573389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124573400_124573600
m54284U_201016_223608/85264972/ccs	chr17	-	1236	7	NNC	ENSMUSG00000015120.16	novel	824	7	NA	NA	0	-54	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_4	1799.90709636791	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGATGTCAGTATTTC	4263	False	NA	NA	False	AGTAAA	-16	NA	25492841	25481206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488159_25488250_25488376_25488454_25492294
m54284U_201016_223608/85328110/ccs	chr3	+	3170	8	NNC	ENSMUSG00000028152.11	novel	6653	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	59.5739978890942	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGATCACGTCGTCTTA	4825	False	NA	19	True	AATAAA	-32	NA	138447955	138610187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603877_138603922_138604027_138604145_138608139
m54284U_201016_223608/85328524/ccs	chr9	-	2874	20	NNC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_18	406.540652258859	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	0	True	ACTAAA	-20	NA	64080185	64044425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64074552_64074671_64075894_64075947_64080099
m54284U_201016_223608/85329831/ccs	chr15	+	183	1	Intergenic	novelGene_7963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTCCCCTTCCCTAA	NA	False	NA	NA	False	NA	NA	NA	99317900	99318083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99317900_99318100
m54284U_201016_223608/853782/ccs	chr1	-	171	1	Intergenic	novelGene_449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	165439502	165439331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_165439300_165439500
m54284U_201016_223608/85394094/ccs	chrX	+	196	1	Intergenic	novelGene_9429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATCTTTTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	37592702	37592898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_37592700_37592900
m54284U_201016_223608/85395865/ccs	chr11	-	3587	19	NIC	ENSMUSG00000041592.17	novel	11287	45	NA	NA	-7116	-3796	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	2.33861835331658	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTTAGCAACTTCCTTG	NA	False	NA	NA	False	AAAAAG	-24	NA	113724161	113670995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_113671970_113682200_113682328_113684125_113684265_113684548_113684690_113685748_113685914_113690968_113691095_113693950_113694113_113697092_113697231_113701154_113701342_113712173_113712290_113712401_113712504_113715840_113715977_113717267_113717339_113717852_113717957_113719183_113719386_113720723_113720919_113721605_113721705_113723079_113723270_113723948
m54284U_201016_223608/854060/ccs	chr9	+	177	1	Intergenic	novelGene_5058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAAAGCCTTTTGAGTT	NA	False	NA	NA	False	NA	NA	NA	106009117	106009294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_106009100_106009300
m54284U_201016_223608/854483/ccs	chr12	+	2240	3	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-299	-533	intron_retention	FALSE	canonical	1	6	junction_1	44.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17931898	17954143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr12_+_17932324_17950987_17951049_17952389
m54284U_201016_223608/85461474/ccs	chr9	-	2207	11	NNC	ENSMUSG00000039048.16	novel	2240	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	55.0422564944425	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTCTTGAGAGTGTT	NA	False	NA	NA	False	NA	NA	NA	35122297	35115503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_35116420_35116600_35116706_35116884_35116987_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
m54284U_201016_223608/85525433/ccs	chr17	-	2602	10	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9263	junction_8	946.978482814462	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884197	45878700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
m54284U_201016_223608/85525815/ccs	chr12	-	8847	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_19	32.5636390713501	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGTGTCGTGTTAC	NA	False	NA	-5	True	ATTAAA	-14	NA	51876319	51790504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
m54284U_201016_223608/85525961/ccs	chr10	+	1087	4	NNC	ENSMUSG00000019804.13	novel	1401	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	1054.41579401423	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTGTGCTCTGGTTGC	NA	False	NA	12	True	AATAAA	-13	NA	42378285	42411366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_42378489_42401949_42402046_42409144_42409270_42410703
m54284U_201016_223608/85525966/ccs	chr3	-	2464	1	Antisense	novelGene_ENSMUSG00000042626.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCTGGGTGTGGTGGTGC	9878	False	NA	NA	False	AATAAA	-37	NA	89330284	89327820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_-_89327800_89330300
m54284U_201016_223608/85592729/ccs	chr4	+	3035	4	NIC	ENSMUSG00000054679.9	novel	829	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_3	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTTTGATGTGCTGTCC	-27	True	NA	NA	False	AATAAA	-13	NA	33209262	33233340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_33209371_33223567_33223673_33225764_33226170_33230923
m54284U_201016_223608/85786966/ccs	chr5	+	3420	10	NNC	ENSMUSG00000029436.10	novel	6422	10	NA	NA	0	-2865	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_8	58.5586126125877	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGGGTTGATCTCCTC	NA	False	NA	34	True	AATAAA	-40	NA	129661232	129685298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_129661513_129671607_129671741_129672017_129672148_129672468_129672753_129673625_129673803_129675722_129675823_129678996_129679080_129679165_129679319_129682715_129682837_129683339
m54284U_201016_223608/85787463/ccs	chr16	+	6410	37	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_28	29.9596436379604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTTCACTGTCGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	94171625	94270079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_94171721_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
m54284U_201016_223608/85853273/ccs	chr15	-	3188	6	NNC	ENSMUSG00000053411.17	novel	663	6	NA	NA	0	-76	intron_retention	FALSE	canonical	3	16	junction_2	208.465824537261	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATAGCATCTATTTATT	NA	False	NA	19	True	NA	NA	NA	79855320	79800089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79802675_79802953_79803129_79805572_79805640_79807672_79807739_79814786_79814831_79855069
m54284U_201016_223608/8585502/ccs	chr17	+	2688	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	32.5386116125864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4357	False	NA	20	True	AATAAA	-22	NA	35827921	35841902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35828009_35829047_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
m54284U_201016_223608/8585727/ccs	chr5	-	1211	2	NNC	ENSMUSG00000041548.5	novel	1816	3	NA	NA	5511	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCTTCATTTAGCGA	NA	False	NA	0	True	AATAAA	-20	NA	116548440	116546549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_116547550_116548229
m54284U_201016_223608/8585820/ccs	chr3	+	1996	15	NIC	ENSMUSG00000045576.17	novel	5728	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	19.3639945701884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTAGTGTATTTTCTTT	648	False	NA	29	True	AATACA	-40	NA	104772386	104834176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104788239_104788280_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
m54284U_201016_223608/85983694/ccs	chr15	-	2342	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7493	-262	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	224.216549845211	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	7649	False	NA	-2	True	AATAAA	-19	NA	88592560	88571498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592298
m54284U_201016_223608/86049826/ccs	chr16	-	4072	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_18	340.731850442275	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163843_16164010_16176627
m54284U_201016_223608/86115483/ccs	chr3	+	2617	11	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	0	-1988	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.7984495658169	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAGAAAAAAAAAA	4416	False	NA	NA	False	NA	NA	NA	89344060	89356271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89344262_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
m54284U_201016_223608/86116158/ccs	chr3	+	6568	19	NNC	ENSMUSG00000078684.9	novel	6190	19	NA	NA	0	387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	100.330149451144	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATCTTGGGTCTGGTTT	NA	False	NA	10	True	AATATA	-11	NA	88682522	88733281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88702795_88706921_88707026_88715213_88715410_88715859_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725069_88726976_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
m54284U_201016_223608/86116572/ccs	chr11	-	1866	11	NIC	ENSMUSG00000018677.10	novel	1564	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	4398	junction_3	175.70853707205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7726	False	NA	95	True	NA	NA	NA	102298332	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102297077_102297187_102297248_102297380_102297481_102298215
m54284U_201016_223608/86245934/ccs	chr8	+	3168	24	NNC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	0	-687	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	52.1592370663352	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCACTATCTTTTCT	NA	False	NA	23	True	ATTAAA	-25	NA	85809943	85824224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_85810118_85811029_85811133_85811236_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
m54284U_201016_223608/86246387/ccs	chr4	+	1907	4	NIC	ENSMUSG00000037600.17	novel	1708	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	23.3666428910958	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACCTGCCTGGTCATCA	5500	False	NA	6	True	NA	NA	NA	133246302	133258098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_133246364_133255050_133256321_133257141_133257217_133257597
m54284U_201016_223608/86247369/ccs	chr11	+	2598	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-3959	combination_of_known_splicesites	FALSE	canonical	3	121	junction_1	2170.29634842802	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCATCTGGCAATGT	NA	False	NA	13	True	ATTAAA	-14	NA	55360543	55391705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
m54284U_201016_223608/86443732/ccs	chr2	-	1034	1	Antisense	novelGene_ENSMUSG00000002728.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAACACATTTCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	145751336	145750302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_145750300_145751300
m54284U_201016_223608/8651592/ccs	chr15	-	2394	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	86	1618	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	3143.77363808211	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	241	False	NA	-15	True	ATTAAA	-10	NA	37007560	36999253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37005373_37005420_37007371
m54284U_201016_223608/8651873/ccs	chr6	-	174	1	Intergenic	novelGene_3591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAAGAAGGGAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	148927977	148927803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148927800_148928000
m54284U_201016_223608/8652038/ccs	chr5	+	176	1	Intergenic	novelGene_2493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCTCTCTCTACACCC	NA	False	NA	NA	False	NA	NA	NA	25719520	25719696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_25719500_25719700
m54284U_201016_223608/8652076/ccs	chr11	-	4379	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	123.776780367017	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470513	61408075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61470392
m54284U_201016_223608/86574455/ccs	chr7	-	2017	20	NNC	ENSMUSG00000038292.15	novel	2262	20	NA	NA	394	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	15.2344557716802	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACAGGATGATTTCCTC	9472	False	NA	-4	True	NA	NA	NA	44853922	44833047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_44833316_44833415_44833533_44833612_44833678_44834701_44834754_44836075_44836135_44837565_44837722_44838035_44838124_44838276_44838342_44838764_44838825_44839060_44839118_44839373_44839452_44842599_44842651_44842882_44843001_44843383_44843546_44843773_44843841_44844952_44845018_44845391_44845579_44845930_44846036_44849668_44849810_44853866
m54284U_201016_223608/86575453/ccs	chr1	+	2279	13	ISM	ENSMUSG00000025991.9	ENSMUST00000027144.8	5555	38	81478	0	81478	0	3prime_fragment	FALSE	canonical	0	0	junction_2	3.27448045073142	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAGTTGAATTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	67243662	67270418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_67243862_67244290_67244359_67245914_67245991_67248754_67248833_67251561_67251670_67253175_67253266_67254568_67254740_67257010_67257086_67259661_67259761_67266282_67266343_67267394_67267508_67268547_67268678_67269406
m54284U_201016_223608/86575542/ccs	chr8	+	1037	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	0	1286	at_least_one_novel_splicesite	FALSE	canonical	3	391	junction_1	2806.70361589891	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57964940	57967529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_57965040_57965695_57965783_57966095_57966242_57966323_57966499_57966999
m54284U_201016_223608/86638732/ccs	chr4	+	3385	3	NIC	ENSMUSG00000038729.25	novel	7231	5	NA	NA	15452	-3342	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTCTTCATGTTGCAG	NA	False	NA	6	True	TATAAA	-18	NA	57757546	57893640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_57757684_57854561_57857038_57892868
m54284U_201016_223608/86638933/ccs	chr12	-	2460	5	NIC	ENSMUSG00000034442.12	novel	2066	5	NA	NA	0	83	intron_retention	FALSE	canonical	3	14	junction_4	37.6056844107377	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATATTGTATAGACTG	NA	False	NA	-12	True	AGTAAA	-16	NA	73333484	73327171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73332677
m54284U_201016_223608/86639669/ccs	chr7	-	541	1	Intergenic	novelGene_4032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCGCAGGCCCCACGGT	NA	False	NA	NA	False	NA	NA	NA	112820379	112819838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_112819800_112820400
m54284U_201016_223608/86640547/ccs	chr8	-	4014	9	NIC	ENSMUSG00000031617.17	novel	2678	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	71	junction_5	11.596739843594	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCTTACGTGTCTTCT	NA	False	NA	-4	True	TTTAAA	-6	NA	78337282	78322610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78332830_78332915_78333047_78336731
m54284U_201016_223608/86704756/ccs	chr11	+	2146	1	Genic_Genomic	ENSMUSG00000061650.7	novel	NA	NA	NA	NA	12888	1034	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATGTAGAGATTTTGT	3617	False	NA	NA	False	AATAAA	-26	NA	59851919	59854065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_59851900_59854100
m54284U_201016_223608/86704946/ccs	chr12	+	3392	15	NIC	ENSMUSG00000020656.17	novel	3469	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	6.88869230207396	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTCGGCTCCTGTTA	NA	False	NA	NA	False	TTTAAA	-33	NA	24622281	24667387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_24622458_24625912_24626100_24628018_24628090_24631326_24631718_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
m54284U_201016_223608/86705594/ccs	chr6	-	5217	24	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_16	51.0872340417994	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAACTCTGTCTGCTC	NA	False	NA	-9	True	AATAAA	-19	NA	148732965	148672188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
m54284U_201016_223608/86706133/ccs	chr4	+	2795	13	NNC	ENSMUSG00000029009.18	novel	847	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	54	junction_1	21.7464875835667	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGAGGCTTGCTCTTG	NA	False	NA	18	True	AAGAAA	-32	NA	148123615	148140663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140089_148140140
m54284U_201016_223608/86706452/ccs	chr17	+	173	1	Intergenic	novelGene_8480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTTCTTTTTTCTTT	NA	False	NA	NA	False	NA	NA	NA	29249640	29249813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29249600_29249800
m54284U_201016_223608/86901991/ccs	chr3	+	1692	13	NNC	ENSMUSG00000040213.14	novel	734	7	NA	NA	-10294	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	24.2674622122344	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCCGTGTTGTACTTTC	NA	False	NA	23	True	AATACA	-37	NA	142418581	142450099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_142418803_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
m54284U_201016_223608/86967300/ccs	chr11	-	2445	25	NIC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_24	127.335453461844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924271	54869933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54924184
m54284U_201016_223608/86967539/ccs	chr7	-	4104	7	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	0	1644	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	44.8578000154067	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713540	27686492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27689948_27704643_27704743_27704891_27705052_27706738_27706866_27707808_27707862_27711760_27711876_27713445
m54284U_201016_223608/86968578/ccs	chr6	+	1686	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	979	-468	at_least_one_novel_splicesite	FALSE	canonical	3	602	junction_1	2063.97825139274	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTCTCATGCAAACTT	4767	False	NA	NA	False	ATTAAA	-14	NA	117884788	117902112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_117884841_117894430_117894560_117896059_117896121_117900668
m54284U_201016_223608/86968768/ccs	chr1	+	1947	8	NNC	ENSMUSG00000026457.15	novel	3123	8	NA	NA	0	-1013	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_5	359.222857324656	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343193	134360073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355901_134356008_134358794_134358989_134359267
m54284U_201016_223608/87098577/ccs	chr7	-	2788	16	ISM	ENSMUSG00000078671.12	ENSMUST00000169922.9	9085	39	0	63625	0	7444	5prime_fragment	FALSE	canonical	3	19	junction_14	8.62142035217451	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGAAACTTTCTGATG	NA	False	NA	-7	True	NA	NA	NA	73191494	73140010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_73140418_73141082_73141173_73143172_73143390_73147454_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73190519_73190653_73190993
m54284U_201016_223608/87099344/ccs	chr8	+	682	3	NNC	ENSMUSG00000031585.14	novel	1634	8	NA	NA	-210	187	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	654.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTTAAGAAGTTAGGAA	NA	False	NA	18	True	AATAAA	-15	NA	34254819	34266993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_34254873_34265971_34266088_34266480
m54284U_201016_223608/87100084/ccs	chr10	+	2967	21	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	0	701	combination_of_known_splicesites	FALSE	canonical	2	7	junction_14	51.7483091511211	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367445	76389768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
m54284U_201016_223608/87163337/ccs	chr12	+	188	1	Intergenic	novelGene_6796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAATCACGTTGACATA	NA	False	NA	NA	False	NA	NA	NA	84284583	84284771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_84284600_84284800
m54284U_201016_223608/8716823/ccs	chr5	-	3404	16	NIC	ENSMUSG00000042508.17	novel	3498	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	63.5882588743132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211737	9168867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
m54284U_201016_223608/8718643/ccs	chr9	-	1642	8	NNC	ENSMUSG00000050471.18	novel	1860	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	45.5246064883417	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTGGCTCTACTTTG	6364	False	NA	-20	True	ATTAAA	-21	NA	35179101	35128530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_35129044_35129224_35129282_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
m54284U_201016_223608/87228464/ccs	chr5	+	2186	9	NIC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	0	-104	combination_of_known_splicesites	FALSE	canonical	1	10	junction_8	650.499219350031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGCTCTCTTGTGGTC	4601	False	NA	3	True	AATAAA	-16	NA	29940992	29991372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29990028
m54284U_201016_223608/87228999/ccs	chr11	+	2236	10	NIC	ENSMUSG00000017718.16	novel	2327	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	15.3984126166015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTTTCTGTTTGTTT	NA	False	NA	15	True	NA	NA	NA	117716749	117730734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_117716833_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
m54284U_201016_223608/87230293/ccs	chr7	-	2771	5	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	40.4992283877113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTCATCTGTTATGTAA	NA	False	NA	-3	True	ATTAAA	-24	NA	25418428	25410530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_25412539_25413777_25413908_25414175_25414270_25415159_25415613_25418342
m54284U_201016_223608/87294519/ccs	chrX	-	3048	20	NIC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	18.5366299040426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134986004	134972847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134982111_134982182_134985845
m54284U_201016_223608/87295965/ccs	chr12	+	3351	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_16	115.676272415738	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	736	False	NA	NA	False	ATTAAA	-21	NA	111540956	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
m54284U_201016_223608/87689576/ccs	chr4	+	3327	18	NIC	ENSMUSG00000010517.8	novel	4468	19	NA	NA	98	-1909	intron_retention	FALSE	canonical	3	1117	junction_7	105.559147230422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCATGAGTATATGTTC	NA	False	NA	28	True	AATAAA	-20	NA	109533882	109819248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
m54284U_201016_223608/87753620/ccs	chr14	+	4430	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	184.773021231456	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
m54284U_201016_223608/87753708/ccs	chr7	-	2177	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	21	junction_7	326.208192913616	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761841	16738564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16741172_16741650_16741757_16742538_16742634_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
m54284U_201016_223608/8782500/ccs	chr9	+	1206	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	673	junction_1	630.170951862611	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
m54284U_201016_223608/87885068/ccs	chr11	+	4294	12	NIC	ENSMUSG00000020366.19	novel	4675	12	NA	NA	0	-313	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	104.259609224774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAGCATGTCCAATTCC	NA	False	NA	24	True	AATACA	-23	NA	49737597	49776925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49760038_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
m54284U_201016_223608/87885074/ccs	chr18	-	2054	9	NIC	ENSMUSG00000071855.6	novel	2801	10	NA	NA	0	393	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	22.4468121344658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAAGACTATTTTAAATA	2750	False	NA	-4	True	ATTAAA	-16	NA	46444958	46415831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_46416354_46416743_46416863_46420416_46420831_46423818_46424210_46424590_46424667_46426470_46426561_46429335_46429458_46432340_46432463_46444760
m54284U_201016_223608/87886136/ccs	chr2	-	3661	18	NIC	ENSMUSG00000098950.8	novel	5505	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_15	80.1041709319311	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953855	155913764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155940149_155940293_155945268_155945350_155953705
m54284U_201016_223608/87951244/ccs	chr2	+	5560	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	82.3578320501457	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038653	156151872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
m54284U_201016_223608/88016727/ccs	chr4	-	2777	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	269.519233606714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126080227_126080382_126088109_126088198_126096362
m54284U_201016_223608/88081368/ccs	chr10	-	4655	32	NIC	ENSMUSG00000035673.11	novel	4850	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	18.0258226152743	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGCCTACAGGTCAG	NA	False	NA	4	True	AATATA	-21	NA	79938532	79892825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894564_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443
m54284U_201016_223608/88212164/ccs	chr2	+	3338	12	NNC	ENSMUSG00000027397.15	novel	3316	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_6	191.197833591932	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTGCTTTTTGTTT	NA	False	NA	22	True	AATAAA	-24	NA	129040720	129053536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129046165_129046225_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
m54284U_201016_223608/88212289/ccs	chr13	-	3239	13	NNC	ENSMUSG00000034575.14	novel	4750	13	NA	NA	0	91	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	17.3755495516609	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTCAGATATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	69682736	69647585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_69648227_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
m54284U_201016_223608/88213761/ccs	chr7	-	789	6	ISM	ENSMUSG00000030708.15	ENSMUST00000154516.3	905	7	3015	-60	0	0	3prime_fragment	FALSE	canonical	3	47	junction_4	7.5736384915046	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTATGATGGGAAGTGA	NA	False	NA	-9	True	AATAAA	-13	NA	100160988	100152227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_100152518_100153122_100153200_100153713_100153828_100155288_100155403_100159901_100160064_100160956
m54284U_201016_223608/88214347/ccs	chr4	-	2740	6	NNC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_5	422.760263033318	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709832_148711137
m54284U_201016_223608/88345166/ccs	chr11	-	3126	13	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_2	230.602155598482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_100239306_100239477_100239686_100240062_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201016_223608/88408953/ccs	chr8	+	4134	18	NIC	ENSMUSG00000044433.17	novel	3832	18	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	42.9626859907903	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTACGTCTCGTGTT	6520	False	NA	53	True	NA	NA	NA	3637659	3659075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_3637960_3647841_3648096_3648685_3648809_3648892_3648989_3650357_3650406_3650675_3650815_3651965_3652106_3652185_3652280_3652367_3652426_3652553_3652628_3653431_3653502_3653605_3655077_3656266_3656407_3656503_3656821_3657790_3657891_3658188_3658302_3658393_3658513_3658597
m54284U_201016_223608/88410802/ccs	chr9	+	2840	6	NNC	ENSMUSG00000032092.6	novel	3107	6	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	211.37171050072	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGATTTTTATTATTTGC	NA	False	NA	15	True	AATAAA	-18	NA	44953904	44965313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44954093_44954997_44955165_44955450_44955662_44958461_44958610_44960949_44961023_44963260
m54284U_201016_223608/88475330/ccs	chr8	-	1239	6	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38817	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	72.7532817129234	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633340	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43595725_43595759_43633233
m54284U_201016_223608/8850039/ccs	chr16	-	1291	12	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	35	junction_8	593.762439626105	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	False	NA	-34	True	AATAAA	-15	NA	22946487	22932700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22940979_22941051_22943285_22943365_22946149_22946292_22946434
m54284U_201016_223608/88540047/ccs	chr1	+	5571	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	0	671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	247.226236735055	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGACTACAGCTTCTTC	6751	False	NA	9	True	AATAAA	-19	NA	134487944	134559931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_134488266_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
m54284U_201016_223608/88540664/ccs	chr4	+	2457	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	86.901724506607	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-25	True	NA	19	True	AGTAAA	-16	NA	11558921	11615805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11612371_11612439_11615442
m54284U_201016_223608/88541112/ccs	chrX	-	202	1	Intergenic	novelGene_9563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCTGATTTTAAATAA	NA	False	NA	NA	False	AAGAAA	-5	NA	100705447	100705245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_100705200_100705400
m54284U_201016_223608/88541880/ccs	chr6	+	185	1	Intergenic	novelGene_3382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTTGGTGTCCCTACA	1153	False	NA	NA	False	NA	NA	NA	88194873	88195058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_88194900_88195100
m54284U_201016_223608/88607421/ccs	chr4	+	1436	8	NNC	ENSMUSG00000023286.17	novel	3483	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	408.183682142423	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	776	False	NA	37	True	TATAAA	-19	NA	156028306	156042171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039898_156040018_156040824_156040906_156041537
m54284U_201016_223608/88671144/ccs	chr1	+	4889	32	NNC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	565.803749947572	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGGTTCATCCTGCA	NA	False	NA	22	True	AATAAA	-24	NA	185095254	185160557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_185095441_185099730_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
m54284U_201016_223608/88672015/ccs	chr6	+	1398	12	NIC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	307.048519599802	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83031814_83031891_83031995_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
m54284U_201016_223608/88672528/ccs	chr7	-	1493	10	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	24	junction_7	747.656057453502	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGTGTGTGGCTCTGT	2656	False	NA	-1	True	NA	NA	NA	28011497	28004940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009720_28009753_28010293_28010445_28011349
m54284U_201016_223608/88737223/ccs	chr16	+	1466	1	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGACTTGGTGTAAAAGCC	9439	False	NA	NA	False	NA	NA	NA	4693671	4695137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_+_4693700_4695100
m54284U_201016_223608/88868514/ccs	chr12	+	2238	2	Intergenic	novelGene_6751	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	80057334	80062765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_80057457_80060649
m54284U_201016_223608/88868826/ccs	chr13	-	193	1	Intergenic	novelGene_7166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	64471586	64471393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64471400_64471600
m54284U_201016_223608/88934815/ccs	chr4	-	1797	5	NNC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	325.07797141609	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_126059411_126060723_126060756_126080341_126080382_126088109_126088198_126096362
m54284U_201016_223608/88997952/ccs	chr17	+	3134	13	NNC	ENSMUSG00000069135.12	novel	3505	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_7	119.683929813303	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTACAGTGTTGGTTTT	NA	False	NA	30	True	ATTAAA	-22	NA	8384371	8415307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401062_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
m54284U_201016_223608/88999626/ccs	chr16	+	779	1	Genic_Genomic	ENSMUSG00000116389.2	novel	NA	NA	NA	NA	-380	-1622	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAAAGATTGTAAGTCCA	NA	False	NA	NA	False	ATTAAA	-10	NA	3164395	3165174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_+_3164400_3165200
m54284U_201016_223608/89065915/ccs	chr18	+	180	1	Intergenic	novelGene_9000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAGCATCTCACTATGC	NA	False	NA	NA	False	NA	NA	NA	67732391	67732571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_67732400_67732600
m54284U_201016_223608/89130791/ccs	chr8	-	3173	21	NIC	ENSMUSG00000057672.17	novel	6662	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	231	junction_12	29.7011784277998	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	False	NA	-26	True	TTTAAA	-25	NA	84425808	84396727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
m54284U_201016_223608/8915151/ccs	chr10	+	1406	11	NNC	ENSMUSG00000035027.19	novel	2405	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	214.132762556317	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1157	False	NA	13	True	NA	NA	NA	80941805	80959717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955410_80956876_80956945_80957736_80957799_80958400_80958447_80959453
m54284U_201016_223608/89327517/ccs	chr7	-	1860	7	NIC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	115.481119187895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGGTGGTTATTTCTC	NA	False	NA	-2	True	AATATA	-20	NA	33832693	33808967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33831913
m54284U_201016_223608/89328185/ccs	chr7	+	3537	13	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3333	junction_5	366.569106339067	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201016_223608/89392542/ccs	chr8	-	488	4	ISM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	911	0	911	0	3prime_fragment	FALSE	canonical	3	6124	junction_2	115.905133622286	901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGACTCTATAGTGACTC	NA	False	NA	-20	True	AATAAA	-17	NA	70354297	70346829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191
m54284U_201016_223608/89393332/ccs	chr5	-	198	1	Intergenic	novelGene_3025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTTCTACCTATCTTTG	6794	False	NA	NA	False	NA	NA	NA	140558272	140558074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_140558100_140558300
m54284U_201016_223608/89457081/ccs	chr4	+	186	1	Intergenic	novelGene_1829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCATACTTTTCTTCAT	3685	False	NA	NA	False	NA	NA	NA	43485964	43486150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_43486000_43486200
m54284U_201016_223608/89458309/ccs	chr5	+	2913	8	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1029.01304011888	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493760	34510780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_34493886_34499865_34500024_34504120_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
m54284U_201016_223608/89523837/ccs	chr5	+	2925	16	NIC	ENSMUSG00000038828.14	novel	3746	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	358	junction_2	22.4453905191145	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCTGTCTGAATCTT	NA	False	NA	19	True	AATAAA	-19	NA	31026978	31034812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
m54284U_201016_223608/89589254/ccs	chr15	+	2455	13	NIC	ENSMUSG00000032783.10	novel	2255	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_1	8.33166649996666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCAGCCAGTGCTGTTG	NA	False	NA	14	True	AATAAA	-23	NA	98972867	98981290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980984_98981108
m54284U_201016_223608/89654152/ccs	chr9	+	4198	22	NIC	ENSMUSG00000034252.15	novel	4706	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	64.7191035033447	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974184	80051453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_79974855_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
m54284U_201016_223608/89655869/ccs	chr19	+	3242	25	NNC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_24	269.419717866009	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1904	False	NA	-56	True	GATAAA	-42	NA	8875475	8894036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988_8893139_8893679
m54284U_201016_223608/89721308/ccs	chr12	-	2174	7	NNC	ENSMUSG00000020652.18	novel	4348	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	14.9666295470958	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4283965	4263481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283781
m54284U_201016_223608/89786083/ccs	chr13	-	3246	13	NIC	ENSMUSG00000034152.7	novel	4922	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	65.7558615891643	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTAGGTGCTTGGTGTG	7173	False	NA	-11	True	ATTAAA	-11	NA	74356828	74320117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74355941
m54284U_201016_223608/89786562/ccs	chr10	+	2389	6	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	46.9535941116332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGTTGTGAGACAC	NA	False	NA	16	True	ATTAAA	-18	NA	76869101	76886265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_76869280_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
m54284U_201016_223608/8981032/ccs	chr5	-	1598	6	NNC	ENSMUSG00000025856.16	novel	1543	7	NA	NA	0	128	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	152.901275338043	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTATTTCTGATGCGCC	NA	False	NA	-13	True	AATAAA	-18	NA	138980708	138962142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979046_138979140_138980463
m54284U_201016_223608/89850562/ccs	chr11	+	1840	4	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	17.6131264181639	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGAGTTCATTGGGT	NA	False	NA	34	True	NA	NA	NA	80074676	80090583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_80075082_80084711_80084875_80087698_80087774_80089386
m54284U_201016_223608/89850930/ccs	chr7	+	3837	9	Fusion	ENSMUSG00000062542.12_ENSMUSG00000057215.7	novel	1294	6	NA	NA	0	0	multi-exon	FALSE	canonical	3	15	junction_3	64.1374256967022	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTCGTTGTCTCATTA	NA	False	NA	NA	False	AGTAAA	-16	NA	106842228	107147860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_+_106842336_106883988_106884145_106884819_106884938_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
m54284U_201016_223608/89851275/ccs	chr7	-	194	1	Intergenic	novelGene_3906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATATTCTCTCTGGGTT	NA	False	NA	NA	False	NA	NA	NA	79654222	79654028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79654000_79654200
m54284U_201016_223608/89981261/ccs	chr17	+	2058	5	NIC	ENSMUSG00000017831.9	novel	2366	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	398.092011977131	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGAGTTTTCTCTGTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	53786314	53814708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_53786637_53804554_53804707_53805415_53805539_53807403_53807498_53813341
m54284U_201016_223608/89983003/ccs	chr7	-	1827	4	NIC	ENSMUSG00000030615.13	novel	756	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	739	junction_3	32.6904675198546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAACATTAAAATACTT	1666	False	NA	NA	False	AATAAA	-19	NA	90106416	90099907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_90100144_90100750_90102109_90104631_90104728_90106279
m54284U_201016_223608/89983225/ccs	chr12	+	1611	3	ISM	ENSMUSG00000021228.16	ENSMUST00000120927.8	1854	4	1535	0	583	0	3prime_fragment	FALSE	canonical	2	7	junction_1	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGTGGTGGTGACAC	NA	False	NA	NA	False	AGTAAA	-1	NA	84100452	84106339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_84100716_84103682_84103886_84105194
m54284U_201016_223608/89983327/ccs	chr1	+	201	1	Intergenic	novelGene_219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCCTTATCCTTCCCCA	3874	False	NA	NA	False	NA	NA	NA	84843786	84843987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_84843800_84844000
m54284U_201016_223608/90047073/ccs	chr8	+	2906	4	NNC	ENSMUSG00000110605.2	novel	1134	4	NA	NA	0	2265	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	15.5777619273972	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTGCCTTGGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	129990121	130011590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_129990206_130007503_130007631_130007817_130007879_130008956
m54284U_201016_223608/90113564/ccs	chr10	-	1843	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	81.2991731541936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	False	NA	NA	False	AATAAA	-21	NA	67121084	67102467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_67103946_67105884_67105926_67111348_67111434_67120845
m54284U_201016_223608/90244577/ccs	chr7	-	188	1	Intergenic	novelGene_3853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCCTGGTGTCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	46610017	46609829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_46609800_46610000
m54284U_201016_223608/90309329/ccs	chr4	+	5337	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	137.961166444446	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201016_223608/90311090/ccs	chr15	+	4531	8	NIC	ENSMUSG00000050697.10	novel	4655	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	45.007482371132	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTATTTCTTATTTCAT	NA	False	NA	18	True	AATAAA	-27	NA	5173372	5211380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_5173478_5190083_5190226_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
m54284U_201016_223608/90440995/ccs	chr14	-	3925	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_14	12.6229887011753	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTCTTGTCATGTT	7526	False	NA	NA	False	AATAAA	-20	NA	27230417	27204363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
m54284U_201016_223608/90441611/ccs	chr3	+	3194	4	NNC	ENSMUSG00000048039.9	novel	2893	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	165.235858362793	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGTGTATGTGTGTGC	NA	False	NA	31	True	NA	NA	NA	87837620	87847993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_87837919_87838336_87839583_87845880_87846082_87846544
m54284U_201016_223608/9046108/ccs	chr2	-	3194	6	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_5	97.638107314716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26279160
m54284U_201016_223608/90505256/ccs	chr11	+	228	1	FSM	ENSMUSG00000080776.2	ENSMUST00000119853.2	813	1	658	-73	658	73	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATATTTCTTGCAGCCATA	NA	False	NA	NA	False	AATAAA	-32	NA	46619302	46619530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_46619300_46619500
m54284U_201016_223608/90571032/ccs	chr15	-	175	1	Intergenic	novelGene_7805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGTATCATGCT	NA	False	NA	NA	False	NA	NA	NA	78905641	78905466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_78905500_78905600
m54284U_201016_223608/90636631/ccs	chr17	-	2697	8	NNC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	156.691559753419	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTGCCGCTTACTTTT	NA	False	NA	0	True	AATAAA	-30	NA	53996361	53981813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_53983740_53986678_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
m54284U_201016_223608/90768666/ccs	chr15	-	1817	9	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	29	junction_8	84.7758072801433	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGTACTATGACCTG	1363	False	NA	0	True	AATAAA	-31	NA	82223008	82213732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222952
m54284U_201016_223608/90833975/ccs	chr7	-	4873	3	NIC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	295.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454907	118441444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_118445318_118451625_118452564_118454845
m54284U_201016_223608/90899539/ccs	chrX	+	2663	9	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	665	junction_4	23.6748812035034	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGGCTTCGTGTCACT	NA	False	NA	14	True	AATAAA	-19	NA	73340748	73348295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
m54284U_201016_223608/90900204/ccs	chr7	-	967	1	NIC	ENSMUSG00000078813.4	novel	2222	4	NA	NA	187	-4589	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGCC	8890	False	NA	NA	False	NA	NA	NA	3668652	3667685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_3667700_3668700
m54284U_201016_223608/90900852/ccs	chr14	+	3191	17	NNC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_12	93.8549204557225	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	False	NA	25	True	AATAAA	-32	NA	30973459	30981901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979461_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
m54284U_201016_223608/90964106/ccs	chr2	-	3226	7	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	70	0	intron_retention	FALSE	canonical	0	0	junction_6	13.2748718344933	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTCTTGACTTTTTGTT	NA	False	NA	-1	True	AATAAA	-17	NA	166349921	166341955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166349381_166349480_166349807
m54284U_201016_223608/91029551/ccs	chr6	+	3974	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_26	71.6795145499915	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185055	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116235602_116236218_116237451_116237630_116239295
m54284U_201016_223608/91030377/ccs	chr4	-	162	1	Intergenic	novelGene_2252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGGAGAAGAAGAAAACC	6524	False	NA	NA	False	NA	NA	NA	135891965	135891803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135891800_135892000
m54284U_201016_223608/91032254/ccs	chr17	-	2805	1	Intergenic	novelGene_8596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTACTACTTTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	43178062	43175257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_43175300_43178100
m54284U_201016_223608/91095187/ccs	chr5	-	2543	9	NIC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-242	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_8	425.280771226492	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187765	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
m54284U_201016_223608/9109706/ccs	chr5	-	200	1	Intergenic	novelGene_2901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTTGTGGTGATAGA	NA	False	NA	NA	False	NA	NA	NA	124579612	124579412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124579400_124579600
m54284U_201016_223608/9110939/ccs	chr3	+	1971	10	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-5	673	combination_of_known_junctions	FALSE	canonical	3	115	junction_8	275.350057782793	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTACTTATTACC	NA	False	NA	23	True	AATAAA	-27	NA	105866818	105875516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873173_105873672_105873742_105874478
m54284U_201016_223608/9111543/ccs	chr12	+	5393	4	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	5890	junction_1	534.78365303696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTTTGGGTAAAATGTAC	NA	False	NA	72	True	ATTAAA	-26	NA	24758239	24764145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_24758445_24758558_24758634_24758937_24762765_24762859
m54284U_201016_223608/91161473/ccs	chr16	-	4697	9	NIC	ENSMUSG00000022772.13	novel	6332	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	20.0234237831596	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTCTGTTGTGTTTA	NA	False	NA	NA	False	AATAAA	-18	NA	31821996	31778489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31821809
m54284U_201016_223608/91227099/ccs	chr17	+	1687	5	NIC	ENSMUSG00000034165.17	novel	385	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	1687.74514885986	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47905237	47910614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47905331_47905658_47905875_47908344_47908505_47908927_47909065_47909533
m54284U_201016_223608/91227922/ccs	chr9	+	2515	23	NIC	ENSMUSG00000032604.17	novel	2800	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_2	38.846487444515	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGCGTCTCTCTGTTGTC	NA	False	NA	13	True	AATAAA	-16	NA	108385257	108393135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392432_108392994
m54284U_201016_223608/91228520/ccs	chr15	-	188	2	Intergenic	novelGene_7838	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	1974	junction_1	0	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTAACTGCAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	81437619	81330741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81330881_81437570
m54284U_201016_223608/91293404/ccs	chr8	+	2006	8	ISM	ENSMUSG00000031486.16	ENSMUST00000178514.8	5129	16	-57	10439	-57	-8627	5prime_fragment	FALSE	canonical	3	17	junction_4	4.03049599419025	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATCAAAATAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	27575553	27603024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370
m54284U_201016_223608/91423615/ccs	chr17	-	1204	1	FSM	ENSMUSG00000091614.3	ENSMUST00000168877.2	510	1	-53	-641	-53	2	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTTTCTTTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	29738817	29737613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_29737600_29738800
m54284U_201016_223608/91423828/ccs	chr7	+	1057	5	NNC	ENSMUSG00000038563.15	novel	3610	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.1139542868376	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGGCCTGTGGCTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	82297848	82308234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82307474
m54284U_201016_223608/91555438/ccs	chr7	+	3231	11	NNC	ENSMUSG00000030811.15	novel	3449	10	NA	NA	626	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	32.3907394173088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCCAGTTTGGCTCTTC	2159	False	NA	4	True	NA	NA	NA	127346572	127368100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_127346757_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
m54284U_201016_223608/91622017/ccs	chr2	-	2358	13	NNC	ENSMUSG00000027423.16	novel	2419	13	NA	NA	-4657	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_12	366.130327433643	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTTCTGACTGTTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	144107339	144092042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144107204
m54284U_201016_223608/91622152/ccs	chr4	-	1393	7	NNC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	0	-541	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_6	178.015604809117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262609	134253415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262499
m54284U_201016_223608/91685528/ccs	chr6	+	3286	17	NIC	ENSMUSG00000035125.11	novel	4192	17	NA	NA	0	-161	combination_of_known_junctions	FALSE	canonical	3	20	junction_9	11.5805602196094	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTGGCCTTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	81900649	81936076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921387_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
m54284U_201016_223608/91685752/ccs	chr1	+	4352	10	NIC	ENSMUSG00000025962.16	novel	2613	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	319	junction_1	48.7627159737417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGTGGATCAGCTGGCTG	NA	False	NA	5	True	AATAAA	-16	NA	63769799	63791624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
m54284U_201016_223608/91751026/ccs	chr13	-	4380	20	NIC	ENSMUSG00000021670.15	novel	4425	20	NA	NA	0	-367	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	109.037211874695	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGCTTCAAGTTTGGT	NA	False	NA	-2	True	AATAAA	-23	NA	96807356	96785841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96806908
m54284U_201016_223608/91751083/ccs	chr18	+	3816	19	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	558.933157623841	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGAAGTCGTTCTT	NA	False	NA	33	True	AATAAA	-21	NA	35251965	35387832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35252035_35271037_35271175_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
m54284U_201016_223608/91751353/ccs	chr1	+	3973	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58219	-1740	intron_retention	FALSE	canonical	3	42	junction_2	46.0506967012082	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	136494419	136556051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_136494541_136551065_136551108_136552021_136552790_136553009
m54284U_201016_223608/917524/ccs	chr5	+	188	1	Intergenic	novelGene_2734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAAGAGAGGCTTGTGGC	NA	False	NA	NA	False	NA	NA	NA	108030091	108030279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108030100_108030300
m54284U_201016_223608/91752442/ccs	chr19	+	2921	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1016	junction_10	68.840104590275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245643	7252590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
m54284U_201016_223608/9175925/ccs	chr1	-	1539	6	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	0	-358	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	123.769139933992	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689508	16640363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_16641507_16652150_16652227_16655499_16655577_16668174_16668278_16672485_16672578_16689460
m54284U_201016_223608/91816901/ccs	chr1	-	1699	13	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	120.514493134874	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGTTTCTGAATGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	189654450	189612688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_189613064_189613691_189613821_189614305_189614415_189616020_189616196_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
m54284U_201016_223608/91882143/ccs	chr10	+	2398	13	NNC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	0	-339	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_4	143.054840882789	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5542	False	NA	10	True	ATTAAA	-16	NA	80905960	80918054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913749_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
m54284U_201016_223608/91948723/ccs	chr10	+	2828	13	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_1	471.055751300558	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1561	False	NA	31	True	ATTAAA	-15	NA	79690438	79700193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79690556_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
m54284U_201016_223608/919690/ccs	chr4	+	3085	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_3	577.28370167728	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4706	False	NA	NA	False	AATAAA	-17	NA	135583442	135593126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590836_135590888_135591039
m54284U_201016_223608/92013073/ccs	chr3	-	4177	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	287.205901039371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3507	False	NA	99	True	AAAAAG	-18	NA	89959822	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201016_223608/92013837/ccs	chr14	+	5397	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_5	46.725093632865	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201633	30249020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
m54284U_201016_223608/92014618/ccs	chr2	+	2470	16	NIC	ENSMUSG00000027012.16	novel	2548	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_15	136.596664999146	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCACTTTTACTTTTTGA	NA	False	NA	24	True	AATAAA	-26	NA	71042335	71093647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092994
m54284U_201016_223608/92078969/ccs	chr15	-	1846	11	NIC	ENSMUSG00000022378.15	novel	1770	12	NA	NA	-117	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	335.160260174144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	8622	False	NA	-6	True	AATAAA	-20	NA	63869935	63802792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63869746
m54284U_201016_223608/92079831/ccs	chr17	-	2308	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	657.005808690503	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5740	False	NA	-8	True	AATAAA	-13	NA	33904393	33865212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
m54284U_201016_223608/92144193/ccs	chr19	+	2976	19	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	56	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_18	26.08160271149	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAACAGAAGCACGTG	9000	False	NA	NA	False	NA	NA	NA	6291753	6302325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302199
m54284U_201016_223608/92144531/ccs	chr17	-	1359	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_9	102.741435015946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382740	24374806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382555
m54284U_201016_223608/92209827/ccs	chr4	-	2794	20	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_18	140.349583327369	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980882	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980440_115980514_115980675
m54284U_201016_223608/92210050/ccs	chr6	-	1941	12	NNC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_10	2458.8277257921	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1567	False	NA	-9	True	AATAAA	-17	NA	7693254	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689311_7689524_7693108
m54284U_201016_223608/92210730/ccs	chr7	-	811	6	NIC	ENSMUSG00000030538.16	novel	1047	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	305.980130073833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCCTTGTATGATGGT	2240	False	NA	-12	True	AATAAA	-15	NA	79882372	79876906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882257
m54284U_201016_223608/92276951/ccs	chr3	-	185	1	Intergenic	novelGene_1648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGATGGAAGTATCCA	NA	False	NA	NA	False	NA	NA	NA	118291027	118290842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_118290800_118291000
m54284U_201016_223608/92341269/ccs	chr11	+	1805	10	NIC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1895	junction_3	137.00455070391	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480689_69481481_69481589_69482175
m54284U_201016_223608/92342601/ccs	chr3	+	3916	4	NIC	ENSMUSG00000005687.15	novel	2717	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	3803	junction_3	91.8924492122297	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5023	False	NA	48	True	AATAAA	-16	NA	103079064	103086143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_103079357_103080590_103080662_103081655_103084736_103085670
m54284U_201016_223608/92342766/ccs	chr9	+	3109	25	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	56.399477317318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	23	True	AATAAA	-24	NA	57038051	57049497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_57038174_57038442_57038566_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
m54284U_201016_223608/92407556/ccs	chr16	+	2213	15	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	69.4050518657669	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATGTTATTTCAATGTT	NA	False	NA	52	True	AATAAA	-19	NA	36648768	36693083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
m54284U_201016_223608/92407630/ccs	chr16	-	3416	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	374.363788438131	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
m54284U_201016_223608/92471480/ccs	chr17	-	3443	14	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	144	junction_10	71.06809802023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201016_223608/92474126/ccs	chr11	+	2229	10	NNC	ENSMUSG00000017715.12	novel	2863	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_4	111.492678162966	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877710	117914837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893217_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
m54284U_201016_223608/92538384/ccs	chr3	+	3962	9	NIC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	697	junction_7	86.7308156020684	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCTGACTGAATGTT	NA	False	NA	3	True	AATAAA	-11	NA	157240012	157254013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157248882_157250600_157250760_157252311
m54284U_201016_223608/92538652/ccs	chr7	+	2074	12	NNC	ENSMUSG00000030435.17	novel	1810	12	NA	NA	459	0	intron_retention	FALSE	canonical	2	7	junction_1	513.507739325424	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCTCATCTGTGTCCA	553	False	NA	33	True	ATTAAA	-23	NA	5065761	5082937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_5065847_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
m54284U_201016_223608/92604599/ccs	chr8	+	1120	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	0	1286	at_least_one_novel_splicesite	FALSE	canonical	3	1278	junction_1	2424.68941310016	642	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57964940	57967529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_57965040_57965612_57965783_57966095_57966242_57966323_57966499_57966999
m54284U_201016_223608/92668599/ccs	chr15	+	3522	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	583	junction_6	63.4240614455424	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900569	81924286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81915464_81919877_81919979_81921657_81921772_81923922
m54284U_201016_223608/92734297/ccs	chr7	+	2960	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	361.946776661711	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648584_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201016_223608/92734567/ccs	chr14	-	172	1	Intergenic	novelGene_7421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAGGAAACA	6973	False	NA	NA	False	NA	NA	NA	47561458	47561286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_47561300_47561500
m54284U_201016_223608/92799243/ccs	chr17	+	5668	25	NIC	ENSMUSG00000024219.17	novel	6838	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_23	11.2395012740285	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	4250	False	NA	14	True	CATAAA	-15	NA	28128290	28281573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
m54284U_201016_223608/92801031/ccs	chr11	+	3319	18	ISM	ENSMUSG00000020893.18	ENSMUST00000021271.14	4671	23	0	3664	0	0	5prime_fragment	FALSE	canonical	3	10	junction_1	5.84636047433339	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGATTCTTCCCCGCC	NA	False	NA	12	True	AATAAA	-18	NA	68989773	68997122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_68989835_68991334_68991743_68991830_68991930_68992021_68992177_68992276_68992399_68992500_68992703_68992812_68992865_68992989_68993133_68993499_68993579_68993650_68993758_68993929_68994084_68994178_68994288_68994374_68994507_68994667_68994774_68994856_68995029_68995116_68995248_68995459_68995640_68996215
m54284U_201016_223608/92865990/ccs	chr2	+	4491	10	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	237	junction_7	20.2362588647088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952141	173964495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_173952366_173952869_173953056_173953406_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962918_173963271_173963383_173963883
m54284U_201016_223608/92932392/ccs	chr11	+	2005	5	NIC	ENSMUSG00000017837.13	novel	2097	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_3	123.71413621733	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCCGTCCCCTACCCCT	NA	False	NA	17	True	AATAAA	-24	NA	100513701	100518433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_100513835_100515017_100515126_100515768_100515843_100515934_100516011_100516819
m54284U_201016_223608/93062863/ccs	chr4	-	178	1	Intergenic	novelGene_2350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	146825644	146825466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146825500_146825600
m54284U_201016_223608/93063432/ccs	chr9	+	3462	11	NIC	ENSMUSG00000042487.7	novel	2180	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	353	junction_2	50.3250434674427	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATGCTTAAGAAAAC	926	False	NA	5	True	AATAAA	-14	NA	75348817	75373714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75364476_75365356_75365544_75368287_75368386_75373475
m54284U_201016_223608/93064020/ccs	chr14	-	184	1	Intergenic	novelGene_7583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACTGAATGATGCAAAAAT	NA	False	NA	NA	False	NA	NA	NA	99782621	99782437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_99782400_99782600
m54284U_201016_223608/93128168/ccs	chr18	-	1850	1	Intergenic	novelGene_8885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-26	NA	35265549	35263699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35263700_35265500
m54284U_201016_223608/93128423/ccs	chr11	-	4426	15	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	106.290514484538	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	9016	False	NA	-8	True	AATAAA	-21	NA	4799365	4715844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
m54284U_201016_223608/93193585/ccs	chr11	+	7167	15	NNC	ENSMUSG00000017639.14	novel	7156	15	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	45.8902861981372	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79481957	79588849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_79482261_79510454_79510543_79511292_79511382_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
m54284U_201016_223608/93257993/ccs	chr17	-	2965	4	NNC	ENSMUSG00000038045.15	novel	764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_3	86.5678924313166	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_79192646_79196359_79196517_79198274_79198370_79200136
m54284U_201016_223608/93258490/ccs	chr6	+	4224	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_30	64.6488721221544	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185055	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239321
m54284U_201016_223608/93259736/ccs	chrX	+	3461	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1538	junction_13	88.1096680817006	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201016_223608/93324884/ccs	chr15	-	2896	6	ISM	ENSMUSG00000022620.15	ENSMUST00000023292.9	2699	7	0	-52	0	0	intron_retention	FALSE	canonical	3	68	junction_4	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTTTAGAAGCATCTAT	NA	False	NA	NA	False	NA	NA	NA	89360316	89356678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89359209_89359324
m54284U_201016_223608/93325580/ccs	chr8	+	1172	5	Intergenic	novelGene_4278	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.1775993080961	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTATGGTTTTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	43806967	43824716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_43807132_43809132_43809201_43811094_43811168_43818030_43818205_43824023
m54284U_201016_223608/93325716/ccs	chr12	+	3170	17	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	147.664950140512	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201016_223608/93456272/ccs	chrX	+	1083	8	NIC	ENSMUSG00000072479.11	novel	1652	9	NA	NA	0	309	combination_of_known_splicesites	FALSE	canonical	3	121	junction_7	152.49623615295	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATGCTTTCATTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	72192401	72202008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72192503_72194831_72194969_72195486_72195557_72196723_72196759_72197791_72197913_72198588_72198689_72201393_72201499_72201594
m54284U_201016_223608/93520091/ccs	chr11	-	2055	15	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	240.619364498015	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGGTTTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	95873437	95853957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95871874_95871957_95873327
m54284U_201016_223608/93522760/ccs	chr2	+	1423	5	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9575	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	186.483745940497	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162873937	162888061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162874156_162875154_162875224_162882546_162882635_162884610_162884720_162887122
m54284U_201016_223608/93585640/ccs	chr5	+	2813	13	NIC	ENSMUSG00000029592.12	novel	4604	13	NA	NA	0	-1788	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	11.3293497901101	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGGTCTAAGGTTTGG	NA	False	NA	22	True	ATTAAA	-24	NA	114238375	114260993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249932_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
m54284U_201016_223608/93652682/ccs	chr2	-	230	1	Intergenic	novelGene_972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTAAACTAGTTCAT	NA	False	NA	NA	False	AAGAAA	-5	NA	104758481	104758251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_104758300_104758500
m54284U_201016_223608/93717272/ccs	chr5	-	219	1	Intergenic	novelGene_3087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAACATAAGAAGTTTCAG	NA	False	NA	NA	False	NA	NA	NA	149078142	149077923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_149077900_149078100
m54284U_201016_223608/9372759/ccs	chr2	+	197	1	Intergenic	novelGene_1263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTAAAAAAGTTAAAGTC	2463	False	NA	NA	False	NA	NA	NA	168551516	168551713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168551500_168551700
m54284U_201016_223608/93980039/ccs	chr8	-	4042	11	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21252	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	172.619350016155	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGAGCTGTGTTACT	NA	False	NA	-9	True	AATAAA	-15	NA	81585873	81491068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81561848_81561936_81585823
m54284U_201016_223608/94045830/ccs	chr6	+	6197	25	NIC	ENSMUSG00000030016.15	novel	9033	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	91.9737186948291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891352	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
m54284U_201016_223608/94046711/ccs	chr11	-	1714	12	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	191.53818426898	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGTGTGTTCTCTCA	NA	False	NA	-4	True	ATTAAA	-27	NA	59730664	59708620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721134_59723709_59723760_59723857_59723971_59727716_59727847_59730495
m54284U_201016_223608/94110959/ccs	chr7	+	643	7	NNC	ENSMUSG00000030672.13	novel	268	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	712.609621196783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4031	False	NA	32	True	AATAAA	-24	NA	126811850	126813460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_126811894_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
m54284U_201016_223608/94175591/ccs	chr6	-	1643	5	NNC	ENSMUSG00000030057.16	novel	1614	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	5020.87238435713	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828012	87820063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_87821139_87822103_87822335_87822446_87822540_87822658_87822776_87827885
m54284U_201016_223608/94177540/ccs	chr2	+	1837	8	NNC	ENSMUSG00000027236.9	novel	5413	8	NA	NA	0	-3573	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	451.575608965149	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGTTATATCCCAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	121859026	121883506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_121859206_121859288_121859393_121871636_121871692_121872065_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
m54284U_201016_223608/94241820/ccs	chr2	+	647	2	Intergenic	novelGene_871	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	80	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGATGGTCGTCTGTTC	NA	False	NA	NA	False	NA	NA	NA	75464372	75465116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_75464502_75464598
m54284U_201016_223608/94306429/ccs	chr2	-	196	1	Intergenic	novelGene_1193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGCCACTGCAG	NA	False	NA	NA	False	NA	NA	NA	157479672	157479476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_157479500_157479700
m54284U_201016_223608/94307912/ccs	chr9	-	178	1	Intergenic	novelGene_4874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAAGAAAAGAAAAGCT	884	False	NA	NA	False	NA	NA	NA	64829241	64829063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_64829100_64829200
m54284U_201016_223608/94308486/ccs	chr7	-	2011	13	NIC	ENSMUSG00000003363.16	novel	2282	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	130.304211367093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATGAGATGGTATGTT	NA	False	NA	1	True	AGTAAA	-31	NA	27252441	27231424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27252422
m54284U_201016_223608/94374189/ccs	chr4	+	228	1	Intergenic	novelGene_1890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCCATAGAAGAATCCCCA	NA	False	NA	NA	False	TATAAA	-24	NA	60104046	60104274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_60104000_60104300
m54284U_201016_223608/94374405/ccs	chr7	+	1051	6	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	507.074905709206	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358636	25367457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_25358809_25362561_25362676_25363672_25363874_25364845_25364987_25365677_25365768_25367124
m54284U_201016_223608/9437870/ccs	chr17	-	1197	6	NIC	ENSMUSG00000014771.14	novel	1120	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	344.156592265788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAACTAAAAACTTATG	NA	False	NA	-32	True	NA	NA	NA	15747563	15741854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747157
m54284U_201016_223608/9438469/ccs	chr11	-	4279	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_9	124.703302202656	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470513	61408074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61444335_61444406_61470392
m54284U_201016_223608/94504054/ccs	chr2	+	1834	1	Genic_Genomic	ENSMUSG00000074698.11	novel	NA	NA	NA	NA	53189	83	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACGGGGTTGGTGGAAA	NA	False	NA	17	True	AATAAA	-31	NA	152122021	152123855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_152122000_152123900
m54284U_201016_223608/94766053/ccs	chr19	-	4078	19	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	1448	junction_13	356.632639429109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGCTAACTACTTGGA	3866	False	NA	-25	True	AATAAA	-18	NA	5345483	5323959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
m54284U_201016_223608/94766910/ccs	chr1	+	2906	14	NIC	ENSMUSG00000026584.15	novel	4368	14	NA	NA	253	216	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	22.8377347864782	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTCTTTTATGTGCTA	NA	False	NA	10	True	AATAAA	-19	NA	163757626	163781587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_163757756_163761047_163761263_163762261_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
m54284U_201016_223608/94833057/ccs	chr6	+	1659	11	NIC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	960	junction_9	76.9269783626005	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
m54284U_201016_223608/95029956/ccs	chr6	-	3644	20	NIC	ENSMUSG00000002413.16	novel	9728	22	NA	NA	124	5071	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	7.35788720728475	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCATTCTCCCTCTTCCTG	6565	False	NA	-15	True	AATAAA	-16	NA	39702273	39585974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
m54284U_201016_223608/95094439/ccs	chr9	+	708	2	NNC	ENSMUSG00000032500.11	novel	3005	5	NA	NA	48006	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	4040	False	NA	NA	False	AATAAA	-20	NA	111316154	111318186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_111316269_111317592
m54284U_201016_223608/95095275/ccs	chr7	-	3517	22	NIC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	147.836613865081	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATTGACTGCCCACCCT	NA	False	NA	-3	True	AATAAA	-24	NA	44578920	44549797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551139_44552172_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
m54284U_201016_223608/95160667/ccs	chr4	+	4682	17	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	0	-1064	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	46.7449445796013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTATGTAGGAATGGTAG	-1	True	NA	12	True	AATAAA	-21	NA	31964119	32022403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988716_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
m54284U_201016_223608/95225663/ccs	chr17	+	2708	20	NIC	ENSMUSG00000024036.17	novel	3389	20	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_1	25.6401693159089	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCCCAC	NA	False	NA	NA	False	AATAAA	-13	NA	31515177	31569669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_31515230_31519263_31519482_31526253_31526336_31534467_31534601_31535114_31535194_31538028_31538165_31540021_31540099_31541072_31541240_31544639_31544678_31547122_31547204_31552545_31552672_31554707_31554799_31556343_31556407_31556964_31557051_31557916_31557966_31559185_31559260_31559907_31559987_31565383_31565482_31568328_31568394_31568755
m54284U_201016_223608/95226578/ccs	chr17	-	3666	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	584	junction_14	79.502923491844	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
m54284U_201016_223608/95226619/ccs	chr11	-	3052	7	NIC	ENSMUSG00000001034.18	novel	3069	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_5	75.7840499196382	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385014	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384331_61384781_61384905
m54284U_201016_223608/95289732/ccs	chr11	+	3451	15	NIC	ENSMUSG00000002129.12	novel	4920	16	NA	NA	0	1208	intron_retention	FALSE	canonical	3	694	junction_11	84.6770575872394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAAGCAGTTTGTCCC	NA	False	NA	7	True	ATTAAA	-22	NA	4110354	4130627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4128226_4129140_4129243_4129353_4129426_4130033
m54284U_201016_223608/95290530/ccs	chr6	-	4792	31	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	51	0	intron_retention	TRUE	canonical	3	436	junction_20	79.3484929493518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3544	False	NA	-9	True	AATAAA	-20	NA	125168515	125144969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
m54284U_201016_223608/95486217/ccs	chr19	-	2617	4	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16435	1719	multi-exon	FALSE	canonical	3	25	junction_1	10.4243305140746	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAAAAATATAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	61301942	61283620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_61285953_61287055_61287117_61287295_61287423_61301845
m54284U_201016_223608/95552533/ccs	chr4	+	3765	32	NIC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	155.794482943758	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGACGTGTGTGCAT	9940	False	NA	39	True	AATAAA	-31	NA	108857851	108918358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108858362_108870706_108871038_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
m54284U_201016_223608/95617925/ccs	chr3	+	6658	31	NIC	ENSMUSG00000027692.17	novel	1340	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	4.82171016226493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTTTTATATTTTT	NA	False	NA	11	True	AATAAA	-21	NA	28463579	28724734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_28463699_28548115_28548173_28559901_28560028_28587036_28587148_28593562_28593654_28596116_28596248_28609076_28609132_28611187_28611267_28618223_28618400_28625015_28625083_28631517_28631723_28648170_28648282_28649055_28649143_28650220_28650410_28658324_28658490_28661286_28661527_28666011_28666119_28675083_28675248_28677159_28677258_28684579_28684765_28692536_28692667_28700745_28700911_28703291_28703404_28704175_28704347_28705931_28706076_28708315_28708451_28715835_28715937_28718067_28718218_28719828_28719989_28720237_28720378_28722047
m54284U_201016_223608/95682880/ccs	chr2	+	2495	7	NIC	ENSMUSG00000027479.15	novel	483	4	NA	NA	0	-4748	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	426.443984858765	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583521	153610482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_153583575_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
m54284U_201016_223608/95683142/ccs	chr9	+	3528	15	NIC	ENSMUSG00000006932.18	novel	2222	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	170.049332577944	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTCATTTTGTTTGTT	NA	False	NA	27	True	ATTAAA	-16	NA	120762883	120789573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_120763028_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
m54284U_201016_223608/95683902/ccs	chr12	+	4405	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_9	463.255035050889	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750991	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
m54284U_201016_223608/9568707/ccs	chr7	-	1752	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	570.766230605841	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCATGTGATGTC	9074	False	NA	-10	True	AATAAA	-15	NA	45045133	45025886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45032548_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
m54284U_201016_223608/9571053/ccs	chr12	-	211	1	Intergenic	novelGene_6619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAATAAAAAAAA	284	False	NA	NA	False	NA	NA	NA	31950272	31950061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_31950100_31950300
m54284U_201016_223608/95750598/ccs	chr12	+	180	1	Intergenic	novelGene_6545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAATTTATAAAGCCT	6763	False	NA	NA	False	NA	NA	NA	4466404	4466584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_4466400_4466600
m54284U_201016_223608/95815345/ccs	chr4	+	3878	4	NNC	ENSMUSG00000058186.14	novel	1938	3	NA	NA	3824	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	197.444225598578	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145401078	145431011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_145401211_145422723_145422806_145425813_145425941_145427474
m54284U_201016_223608/95815550/ccs	chr6	-	2896	17	NIC	ENSMUSG00000029676.16	novel	3151	18	NA	NA	0	-208	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	31.693847983481	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTTTTGTGTCTGTGTGT	0	True	NA	-6	True	AATAAA	-14	NA	25809225	25743943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25800282_25800510_25805873_25805941_25809173
m54284U_201016_223608/95945881/ccs	chr2	-	3028	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	428.286046352201	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9690	False	NA	NA	False	AATAAA	-26	NA	35090994	35070216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089936_35090022_35090771
m54284U_201016_223608/95946572/ccs	chr1	-	176	1	Intergenic	novelGene_519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTATACTTGGCATC	NA	False	NA	NA	False	NA	NA	NA	180766781	180766605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_180766600_180766800
m54284U_201016_223608/95947519/ccs	chr15	+	2283	10	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	245	junction_2	19.9208309609022	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	4826	False	NA	24	True	AATAAA	-27	NA	76215543	76219107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
m54284U_201016_223608/96078256/ccs	chr3	+	1874	11	NIC	ENSMUSG00000050150.17	novel	2072	11	NA	NA	0	1036	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	33.6964389809962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCTTTATTTTTGTTTA	NA	False	NA	7	True	AATACA	-17	NA	135053789	135099880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097921_135098011_135099720
m54284U_201016_223608/96143003/ccs	chr17	+	4577	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_13	35.4617708255333	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
m54284U_201016_223608/96273296/ccs	chr13	+	1494	8	NIC	ENSMUSG00000025875.15	novel	1585	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_5	126.228493823943	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54937275	54944588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943227_54943272_54943778_54943896_54943969
m54284U_201016_223608/96274428/ccs	chr17	+	2849	15	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	309	junction_14	144.223412999217	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTATTGGCTTAGGTGC	NA	False	NA	NA	False	TATAAA	-25	NA	56386637	56407607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
m54284U_201016_223608/96339470/ccs	chr4	+	1741	17	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	43.6183286446191	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTTCTGGGCTTTCTC	NA	False	NA	35	True	AATAAA	-25	NA	116664934	116676637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
m54284U_201016_223608/96339557/ccs	chr2	+	1631	1	ISM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	42843	4429	4695	2293	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCCGTGTTTGTCACTTG	NA	False	NA	20	True	AATAAA	-25	NA	132147910	132149541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_132147900_132149500
m54284U_201016_223608/96340537/ccs	chr3	+	3359	11	NNC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	441.31268959775	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6105	False	NA	NA	False	AATAAA	-26	NA	88461064	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466895_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
m54284U_201016_223608/96340543/ccs	chr4	-	182	1	Intergenic	novelGene_2015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	116265695	116265513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116265500_116265700
m54284U_201016_223608/9634122/ccs	chr9	-	199	1	Intergenic	novelGene_4998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTGAAATGGCTTACA	NA	False	NA	NA	False	NA	NA	NA	90020970	90020771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_90020800_90021000
m54284U_201016_223608/96405661/ccs	chr17	+	1604	5	NIC	ENSMUSG00000046711.17	novel	1595	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	289	junction_4	2070.90322987338	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775626	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_27775724_27778506_27778645_27779901_27779986_27780434_27780486_27781414
m54284U_201016_223608/96405851/ccs	chr9	-	2520	8	NIC	ENSMUSG00000032562.14	novel	2215	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1026	junction_1	124.90437158409	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTGTTCTTTTCTCCT	4794	False	NA	0	True	AATAAA	-24	NA	107512542	107491323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_107492298_107492810_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
m54284U_201016_223608/96406265/ccs	chr3	+	2702	13	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	64.2475140029212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101639	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
m54284U_201016_223608/96535472/ccs	chr7	+	5467	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	127	junction_1	73.1737819636508	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	82	False	NA	20	True	ATTAAA	-20	NA	4140037	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
m54284U_201016_223608/96536232/ccs	chr5	+	728	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2211	25	0	0	3prime_fragment	FALSE	canonical	3	535	junction_1	139.257629952545	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGTGCACTTGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	115376105	115379025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
m54284U_201016_223608/96536965/ccs	chr6	-	1712	5	NIC	ENSMUSG00000004263.16	novel	4433	10	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	39.1431667088906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCTGTGACGTGTTTTT	9789	False	NA	0	True	AAAACA	-21	NA	124722620	124719506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722492
m54284U_201016_223608/96601214/ccs	chr8	-	2162	8	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	226.92190511365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419892	110397956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110399274_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201016_223608/96602469/ccs	chr10	-	171	1	Intergenic	novelGene_5406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAAAGGTTTAAC	NA	False	NA	NA	False	NA	NA	NA	75403111	75402940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75402900_75403100
m54284U_201016_223608/96602564/ccs	chr8	-	2648	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1743	-454	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	71.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	6778	False	NA	-3	True	NA	NA	NA	72156176	72143853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_72145800_72145960_72146544_72156057
m54284U_201016_223608/96602704/ccs	chr17	-	3776	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_5	27.8384552703043	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGGCAAACAGCCAGT	NA	False	NA	-16	True	ATTAAA	-18	NA	32583437	32573034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766_32581938_32583155
m54284U_201016_223608/96602919/ccs	chr8	-	2005	13	NIC	ENSMUSG00000038225.16	novel	1833	14	NA	NA	0	266	combination_of_known_splicesites	FALSE	canonical	3	19	junction_10	37.7258937012174	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070247	47031631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47063474_47063661_47065404_47065482_47070168
m54284U_201016_223608/96666740/ccs	chr1	+	2105	5	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	176	junction_1	31.068472765812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187513	75190886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75190342_75190457
m54284U_201016_223608/96667283/ccs	chr13	-	175	1	Intergenic	novelGene_7017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAGTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	35302425	35302250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_35302200_35302400
m54284U_201016_223608/96667738/ccs	chr2	+	1362	9	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_7	223.812107302085	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
m54284U_201016_223608/96731151/ccs	chr19	-	1898	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	36.2745089560148	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4140	False	NA	-3	True	AATAAA	-21	NA	42074796	42063380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067117_42067216_42074635
m54284U_201016_223608/96863398/ccs	chr7	+	4274	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_28	53.1046689787907	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285674	35338651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337442
m54284U_201016_223608/96864636/ccs	chr2	+	2159	7	NNC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	48.2749647563022	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	1945	False	NA	NA	False	AATAAA	-15	NA	122016752	122036878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_122016834_122016944_122017027_122021087_122021150_122021605_122021790_122023712_122023787_122028866_122028956_122035291
m54284U_201016_223608/96864956/ccs	chr12	+	1264	3	NIC	ENSMUSG00000072949.7	novel	2272	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_2	57	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACACAGTTGTGTAAC	2819	False	NA	1	True	AATAAA	-12	NA	84056263	84064438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_84056741_84061152_84061356_84063854
m54284U_201016_223608/96930259/ccs	chr7	-	1346	9	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	287	junction_8	6630.75357708308	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126399218	126394405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126399173
m54284U_201016_223608/9700424/ccschrX_GL456233v2	chrX_GL456233v2_random	-	2495	8	Intergenic	novelGene_9778	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_7	117.818088767457	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTTTCTTCTTTAAT	NA	False	NA	-5	True	AATAAA	-12	NA	134112	105707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_GL456233v2_random_-_107510_109039_109133_116592_116661_119836_119928_123935_124074_125547_125606_127389_127507_133984
m54284U_201016_223608/97059099/ccs	chr5	+	181	1	Intergenic	novelGene_2505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGGAAAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	29882647	29882828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_29882600_29882800
m54284U_201016_223608/97059311/ccs	chr19	+	3507	2	Fusion	ENSMUSG00000044387.6_ENSMUSG00000033863.3	novel	414	2	NA	NA	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCATTACGTTCTTCCA	NA	False	NA	NA	False	AATAAA	-29	NA	23112263	23145498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr19_+_23112319_23142046
m54284U_201016_223608/97124719/ccs	chr13	-	2882	11	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	114.767983340303	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGTGAGGCTTTGTG	NA	False	NA	NA	False	ATTAAA	-25	NA	68730240	68708898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68730183
m54284U_201016_223608/97126818/ccs	chr13	-	6043	6	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	3468	junction_3	249.128882307933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100922994	100915239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100922127_100922240_100922412_100922889
m54284U_201016_223608/97191329/ccs	chr10	+	1669	3	NNC	ENSMUSG00000046463.6	novel	1791	3	NA	NA	1384	661	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATAATTTATAATAAT	NA	False	NA	NA	False	AATAAA	-8	NA	37018468	37027972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_37018518_37024872_37025003_37026482
m54284U_201016_223608/97192690/ccs	chr6	-	1727	8	NNC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	606.197381474155	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942501	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941749_124941892_124942364
m54284U_201016_223608/97256523/ccs	chr7	+	1416	5	NIC	ENSMUSG00000030868.7	novel	1532	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	141.324758977329	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTAGGCTCATTCATT	NA	False	NA	14	True	AATAAA	-15	NA	121732276	121748267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121747279
m54284U_201016_223608/97257484/ccs	chr10	+	4264	20	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14816	0	intron_retention	TRUE	canonical	3	27	junction_12	129.882239439747	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25259740	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_25259800_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201016_223608/97321319/ccs	chr11	+	174	1	Intergenic	novelGene_6461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	115628317	115628491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115628300_115628500
m54284U_201016_223608/97388887/ccs	chr17	+	4471	12	NIC	ENSMUSG00000006705.14	novel	2170	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_6	55.2265057934029	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGATTCTGTAAAGCTT	NA	False	NA	29	True	ATTAAA	-22	NA	31783732	31826667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814201_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
m54284U_201016_223608/97454846/ccs	chr2	-	1564	5	NIC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	0	0	intron_retention	TRUE	canonical	3	284	junction_3	30.0114561459453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8226	False	NA	-1	True	AATAAA	-19	NA	164646742	164634687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_164634931_164636904_164637730_164641639_164641866_164644916_164645054_164646609
m54284U_201016_223608/97518587/ccs	chr11	-	3069	2	Intergenic	novelGene_6194	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCGTGGTCTCGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	88787238	88781075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88783940_88787033
m54284U_201016_223608/97520405/ccs	chr5	-	3423	5	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	934	junction_2	102.524082536739	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186754	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671
m54284U_201016_223608/97585715/ccs	chr7	+	183	1	Intergenic	novelGene_4055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGGAAAGAAAGTCTGT	NA	False	NA	NA	False	NA	NA	NA	118035012	118035195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_118035000_118035200
m54284U_201016_223608/97651323/ccs	chr5	+	2146	18	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	110	junction_9	229.420784136424	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696141	74756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
m54284U_201016_223608/97714822/ccs	chr2	-	2454	7	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	0	-1328	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	63.6649214420486	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	130471947	130433249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
m54284U_201016_223608/97716203/ccs	chr18	+	850	3	NNC	ENSMUSG00000024576.15	novel	3204	9	NA	NA	0	-286	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	887.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAAATACACCACTGGT	482	False	NA	NA	False	AATAAA	-9	NA	61688398	61691023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_61688945_61689573_61689681_61690826
m54284U_201016_223608/97782179/ccs	chr10	+	188	1	Intergenic	novelGene_5383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAAAACAAAAGAAAGCA	401	False	NA	NA	False	NA	NA	NA	69192496	69192684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_69192500_69192700
m54284U_201016_223608/97845748/ccs	chr11	+	208	1	Intergenic	novelGene_6107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGAGGAAAGCCACGTG	NA	False	NA	NA	False	TATAAA	-25	NA	80109307	80109515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_80109300_80109500
m54284U_201016_223608/97847567/ccs	chr10	+	203	1	Intergenic	novelGene_5442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCCCAGCTCCCCGTT	5223	False	NA	NA	False	TTTAAA	-4	NA	79760337	79760540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_79760300_79760500
m54284U_201016_223608/97847653/ccs	chr9	+	4003	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_4	79.7542122712023	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
m54284U_201016_223608/97912256/ccs	chr4	-	4507	28	NIC	ENSMUSG00000040964.17	novel	4382	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	53.9528321154549	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376067	140241795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
m54284U_201016_223608/97913428/ccs	chr5	+	192	1	Intergenic	novelGene_2644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAACCTGTTGCTGACTT	2725	False	NA	NA	False	NA	NA	NA	86074470	86074662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_86074500_86074700
m54284U_201016_223608/98042918/ccs	chr9	+	3731	16	NIC	ENSMUSG00000032185.16	novel	3336	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_3	288.484361216803	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAGGGTCCAAGAATC	NA	False	NA	40	True	AATAAA	-42	NA	21458218	21500783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486189_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
m54284U_201016_223608/98173158/ccs	chr4	+	2514	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_3	355.1049140747	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650936	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134651079_134651185_134651794_134652603_134653133_134653336_134654130_134654241
m54284U_201016_223608/98239465/ccs	chr11	+	2201	5	ISM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	-22	491	0	0	5prime_fragment	FALSE	canonical	3	583	junction_4	77.1508263079534	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441
m54284U_201016_223608/98306412/ccs	chr7	+	2781	11	NNC	ENSMUSG00000049643.16	novel	1989	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_4	129.933983237643	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	449	False	NA	NA	False	AATAAA	-20	NA	27252710	27281524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_27252779_27255838_27255960_27259976_27260029_27260463_27260597_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
m54284U_201016_223608/98306502/ccs	chr11	-	196	1	Intergenic	novelGene_6401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAGAAATAAGCGCTGAT	NA	False	NA	NA	False	NA	NA	NA	106955366	106955170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106955200_106955400
m54284U_201016_223608/98437109/ccs	chr19	+	1247	6	NIC	ENSMUSG00000040385.8	novel	1473	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	77	junction_1	1534.00737938251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATAGCCTCTGTCTCTCTT	3371	False	NA	31	True	AATAAA	-20	NA	4242157	4245419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_4242271_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
m54284U_201016_223608/98437574/ccs	chr6	-	3555	10	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	5712	junction_9	757.172925761462	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446874	51438100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
m54284U_201016_223608/985235/ccs	chr17	+	3916	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	178.822969441848	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201016_223608/98568555/ccs	chr12	-	199	1	Intergenic	novelGene_6696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGTAATCTAAAAGACAGT	NA	False	NA	NA	False	NA	NA	NA	71040638	71040439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71040400_71040600
m54284U_201016_223608/98631808/ccs	chr5	+	1411	6	NNC	ENSMUSG00000028970.10	novel	613	4	NA	NA	-252	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	91.0173609812985	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	7186	False	NA	10	True	ATTAAA	-17	NA	8901134	8916315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_8901271_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
m54284U_201016_223608/98698082/ccs	chr16	+	2473	16	NNC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_15	746.651565323478	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317641	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327716
m54284U_201016_223608/98698143/ccs	chr5	+	2405	6	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	43.0041858427758	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108842095	108854790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108842399_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
m54284U_201016_223608/98698905/ccs	chr8	-	973	6	NNC	ENSMUSG00000031594.10	novel	1120	8	NA	NA	5777	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	3.55527776692624	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGCCATGGTAATTGT	NA	False	NA	NA	False	AATAAA	-33	NA	41662413	41644470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_41644718_41649994_41650183_41650350_41650440_41652688_41652787_41653481_41653642_41662222
m54284U_201016_223608/98699413/ccs	chr19	-	2616	16	NIC	ENSMUSG00000041491.9	novel	2667	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	54.2496287749716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	175	False	NA	NA	False	AATAAA	-17	NA	15962353	15933136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_15933768_15935458_15935526_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
m54284U_201016_223608/98763831/ccs	chr10	-	4375	1	Intergenic	novelGene_5202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGGAAAACTCACTCCT	NA	False	NA	NA	False	NA	NA	NA	13855932	13851557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_13851600_13855900
m54284U_201016_223608/98765169/ccs	chr18	+	2469	12	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	315	junction_6	28.9099485293029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGCCCTTGAGTGTG	3975	False	NA	20	True	AATAAA	-21	NA	38383319	38395682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391416_38392949_38393110_38394116_38394339_38394932
m54284U_201016_223608/98896688/ccs	chr19	-	1137	6	NIC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	103.315826473973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4758	False	NA	-1	True	GATAAA	-17	NA	6965019	6959840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964719
m54284U_201016_223608/98959904/ccs	chr3	+	3083	8	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-5	673	intron_retention	FALSE	canonical	3	910	junction_4	51.9076888646114	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTACTTATTACC	NA	False	NA	23	True	AATAAA	-27	NA	105866818	105875516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105873742_105874478
m54284U_201016_223608/98960254/ccs	chr10	-	2687	12	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	0	-179	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	9.0160554677945	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGCTTGCTCGCACTGT	NA	False	NA	NA	False	ATTAAA	-29	NA	13350156	13089317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
m54284U_201016_223608/99026657/ccs	chr9	-	6298	1	NIC	ENSMUSG00000032412.9	novel	1994	7	NA	NA	4629	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAACACATGATGGAGT	NA	False	NA	-10	True	AATAAA	-41	NA	96221005	96214707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_96214700_96221000
m54284U_201016_223608/99027420/ccs	chr1	-	2895	14	NIC	ENSMUSG00000006010.15	novel	3273	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	29.9368170945323	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAATGTGGAATTTTA	965	False	NA	NA	False	AATAAA	-13	NA	150268499	150237063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264371_150265986_150266108_150268440
m54284U_201016_223608/99027478/ccs	chr15	-	1806	4	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	61.3568795382121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACTCTTAAGTGAATGT	9168	False	NA	-5	True	AATAAA	-28	NA	82784012	82692636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82783702
m54284U_201016_223608/99158590/ccs	chr4	-	2882	15	NNC	ENSMUSG00000028207.19	novel	2884	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	164.974286802891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGATTGTCATTATTTT	4	True	NA	-4	True	AATAAA	-17	NA	9669086	9575266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_9576974_9580219_9580294_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
m54284U_201016_223608/99354482/ccs	chr5	-	575	1	FSM	ENSMUSG00000060419.9	ENSMUST00000140155.2	441	1	-54	-80	-54	80	mono-exon	FALSE	NA	NA	NA	NA	NA	1194	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTTTAAAAGGCCCTA	NA	False	NA	NA	False	AATAAA	-44	NA	129205635	129205060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129205100_129205600
m54284U_201016_223608/99418137/ccs	chr16	+	3024	9	ISM	ENSMUSG00000022884.17	ENSMUST00000147117.8	1947	10	4	189	0	0	intron_retention	FALSE	canonical	3	563	junction_3	488.360122629807	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
m54284U_201016_223608/99418993/ccs	chr6	+	4831	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_22	94.6080321752129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1954	False	NA	28	True	AATAAA	-30	NA	65019819	65093045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65091284
m54284U_201016_223608/99420619/ccs	chr2	-	2826	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_12	857.58899585591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022132	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
m54284U_201016_223608/99484047/ccs	chr4	+	5331	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	131.228263506217	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201016_223608/99485218/ccs	chr18	-	4525	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_14	47.0558179187229	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTTTTTTGT	-23	True	NA	7	True	NA	NA	NA	6135970	6024426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
m54284U_201016_223608/99550406/ccs	chr10	+	1983	14	NNC	ENSMUSG00000019777.17	novel	2005	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_13	331.192394790194	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTTCTGTCTGTTTATT	NA	False	NA	14	True	ATTAAA	-15	NA	36850539	36877885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876401_36877524
m54284U_201016_223608/9963645/ccs	chr1	-	2044	12	NNC	ENSMUSG00000026277.15	novel	4249	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	53.4045839491036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGTACAGAGCCTGGC	NA	False	NA	-36	True	AATAAA	-19	NA	93563351	93549623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553368_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
m54284U_201016_223608/9963651/ccs	chr5	-	177	1	ISM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	13140	2726	10295	2239	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAGGGAACATTTTCATT	NA	False	NA	NA	False	NA	NA	NA	138140866	138140689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_138140700_138140900
m54284U_201016_223608/9963866/ccs	chrX	+	2244	9	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_5	467.123845998039	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72246536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241732_72241891_72241992_72243351_72243451_72245455_72245552_72245645
m54284U_201016_223608/9964258/ccs	chr4	+	611	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.29827926028	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_146516986_146533486_146533533_146547961_146548020_146548860_146548988_146550437
m54284U_201016_223608/99746313/ccs	chr4	+	2149	10	NIC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	0	-1475	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	367.852963110447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCATGTTTGCTTTTG	-9	True	NA	22	True	AGTAAA	-14	NA	55350051	55390762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_55350251_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
m54284U_201016_223608/99746793/ccs	chr2	+	5271	15	ISM	ENSMUSG00000026883.18	ENSMUST00000112986.9	5580	17	103084	0	0	0	3prime_fragment	FALSE	canonical	3	47	junction_14	55.3541934698165	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551361	35621006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
m54284U_201016_223608/99748628/ccs	chr3	-	176	1	Intergenic	novelGene_1494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	88590135	88589959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88590000_88590100
m54284U_201016_223608/99811616/ccs	chr19	-	1428	8	ISM	ENSMUSG00000059326.8	ENSMUST00000237386.2	1771	11	693	-9	0	0	3prime_fragment	FALSE	canonical	3	89	junction_6	20.6861878398834	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9871	False	NA	-2	True	NA	NA	NA	61215121	61212839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962
m54284U_201016_223608/99812054/ccs	chr2	-	1837	15	NNC	ENSMUSG00000109865.2	novel	1795	14	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	360.744588543287	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGAGTCTTTGTTTTCTT	3966	False	NA	-5	True	ATTAAA	-20	NA	3513827	3489886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3494224_3494291_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
m54284U_201016_223608/99879431/ccs	chr10	-	175	1	Intergenic	novelGene_5486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCGAAGCAAGCGGGTCT	NA	False	NA	NA	False	NA	NA	NA	85379127	85378952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_85379000_85379100
m54284U_201016_223608/99943369/ccs	chrX	+	4425	15	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	232.87177868115	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132960082	132987568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132973224_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
m54284U_201016_223608/99945248/ccs	chr2	-	194	1	Intergenic	novelGene_982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAGTATTAAATAGTTAT	NA	False	NA	NA	False	NA	NA	NA	110663676	110663482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_110663500_110663700
m54284U_201016-1_223608/10094976/ccs	chr1	-	3681	14	NNC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	0	-3467	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_13	1699.00209834406	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTTTGGGATTCTCGC	NA	False	NA	-21	True	AATAAA	-15	NA	178165362	178155863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163721_178164517
m54284U_201016-1_223608/105055085/ccs	chr1	+	3289	8	NIC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	51	-237	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	1014.93826091511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTGGACTTGT	NA	False	NA	15	True	AATAAA	-18	NA	87142058	87167973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
m54284U_201016-1_223608/113904410/ccs	chr12	+	3109	15	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_12	411.282141601115	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713247	98754012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
m54284U_201016-1_223608/118294254/ccs	chr10	-	2050	6	NNC	ENSMUSG00000004359.17	novel	646	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	180.578625534696	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520877	88510633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_88511933_88513361_88513757_88514385_88514499_88515720_88515818_88516340_88516437_88520827
m54284U_201016-1_223608/123275364/ccs	chr4	-	2456	6	NIC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	32.8852550545073	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCTTGTGTGAACACTG	-1	True	NA	-4	True	AATAAA	-17	NA	16013821	15997226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_15999001_16001929_16002022_16005385_16005549_16006356_16006494_16008600_16008756_16013686
m54284U_201016-1_223608/123601803/ccs	chr11	-	5328	14	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_11	60.3367277042696	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8169	False	NA	-2	True	NA	NA	NA	104333117	104224326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
m54284U_201016-1_223608/128190288/ccs	chr18	-	4307	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	0	94	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_21	58.4071253380051	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCCATGGACTTGAAA	NA	False	NA	46	True	AATAAA	-17	NA	62681766	62637131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
m54284U_201016-1_223608/129433834/ccs	chr18	-	5478	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-287	0	at_least_one_novel_splicesite	FALSE	canonical	3	164	junction_9	17.2092464467595	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCCTAGTTTCCTG	NA	False	NA	-22	True	AATAAA	-19	NA	21029437	20950279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
m54284U_201016-1_223608/130089433/ccs	chr7	-	3418	12	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_10	89.1434909764649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTTGTATTGTAAATGT	NA	False	NA	NA	False	NA	NA	NA	105401442	105394017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105401188_105401261_105401377
m54284U_201016-1_223608/134153245/ccs	chr9	+	3661	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	213	0	intron_retention	FALSE	canonical	3	42	junction_1	101.01175674148	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1515	False	NA	23	True	AATAAA	-23	NA	113760214	113806270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201016-1_223608/135595056/ccs	chrX	+	6360	8	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	36.8604649665603	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	84617570	84678075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_84617772_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
m54284U_201016-1_223608/136839856/ccs	chr4	+	4313	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	145.031078879082	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225248	107273543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237797_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
m54284U_201016-1_223608/139594313/ccs	chr5	+	4700	17	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	220	junction_12	176.742209428733	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGAAGTTTGGTCATTA	NA	False	NA	13	True	AATAAA	-22	NA	74696163	74759451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
m54284U_201016-1_223608/140380956/ccs	chr14	+	4943	25	NIC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	-66	182	combination_of_known_junctions	TRUE	canonical	2	100	junction_12	26.7082683306541	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACTTGTGACTTTCTGC	NA	False	NA	21	True	ATTAAA	-15	NA	57124043	57197991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_57124156_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
m54284U_201016-1_223608/143655323/ccschrUn	chrUn_JH584304v1	-	3200	7	Intergenic	novelGene_9765	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	124	junction_4	312.424213032359	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591
m54284U_201016-1_223608/146933446/ccs	chr10	+	8624	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	34.4406736287199	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGATGTTACAGTTCT	NA	False	NA	13	True	ATTAAA	-14	NA	66932085	67092097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
m54284U_201016-1_223608/147915231/ccs	chr12	+	627	5	NIC	ENSMUSG00000109975.2	novel	363	4	NA	NA	0	166	combination_of_known_junctions	FALSE	canonical	3	112	junction_2	32.0507410210747	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCTTCTGTCTTAGTTA	6100	False	NA	NA	False	ATTAAA	-18	NA	21593307	21604688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_21593347_21595309_21595401_21599867_21599956_21604009_21604108_21604377
m54284U_201016-1_223608/149358206/ccs	chr5	+	2391	9	NNC	ENSMUSG00000023106.16	novel	2339	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	669.883758573083	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCGCTAACTGAATTTG	9085	False	NA	NA	False	AATGAA	-2	NA	124045344	124066898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_124045430_124046162_124046278_124046446_124046606_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
m54284U_201016-1_223608/153749316/ccs	chr2	+	3840	5	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	217.555165417877	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	864	False	NA	5	True	AATAAA	-19	NA	131104414	131141108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_131104736_131115830_131116184_131129393_131129518_131135318_131135445_131138192
m54284U_201016-1_223608/154469062/ccs	chr11	+	3563	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	0	30191	at_least_one_novel_splicesite	FALSE	canonical	3	225	junction_24	67.5794671109502	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCATAATTTGTTC	1916	False	NA	8	True	NA	NA	NA	87017902	87141700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
m54284U_201016-1_223608/159451020/ccs	chr4	+	3634	22	NNC	ENSMUSG00000039523.17	novel	5151	22	NA	NA	0	-1511	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_14	19.8388061962538	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGCTATTCTAAGAGCAG	NA	False	NA	NA	False	AATAAA	-16	NA	154059650	154091678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078134_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
m54284U_201016-1_223608/159517299/ccs	chr2	+	2191	3	NIC	ENSMUSG00000027243.9	novel	2308	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	37.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAACT	3373	False	NA	NA	False	NA	NA	NA	91541197	91551890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_91541411_91542424_91543211_91550698
m54284U_201016-1_223608/159909677/ccs	chr17	+	3139	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_5	72.172969316774	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148064	37170290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
m54284U_201016-1_223608/16321021/ccs	chr9	+	2708	13	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_3	91.9133045622643	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201016-1_223608/163905647/ccs	chr7	+	3289	15	NIC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	51.4204358644479	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97437747	97561588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_97438182_97503645_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
m54284U_201016-1_223608/164170189/ccs	chr4	+	3351	12	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	2428	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1322.08953698365	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	4809	False	NA	28	True	AATAAA	-21	NA	140431211	140450531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_140431263_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
m54284U_201016-1_223608/16516570/ccs	chr12	-	2581	11	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	133.084334164469	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTGTTCCTTGTC	NA	False	NA	0	True	ATTAAA	-19	NA	108145573	108072689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
m54284U_201016-1_223608/16516638/ccs	chr13	-	4023	9	NIC	ENSMUSG00000021638.13	novel	4052	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	21.5638586528478	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTAGTCCACTGTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	100689006	100633014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688923
m54284U_201016-1_223608/168231714/ccs	chr13	-	4695	14	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	0	-1134	combination_of_known_junctions	FALSE	canonical	3	31	junction_13	15.7570309280854	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTGCCACAATCAAGGG	9676	False	NA	NA	False	NA	NA	NA	64422802	64341492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_64344490_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
m54284U_201016-1_223608/16975255/ccs	chr12	-	2878	14	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	177.875064192647	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTGTTCCTTGTC	NA	False	NA	0	True	ATTAAA	-19	NA	108145573	108072689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108133531_108133655_108145411
m54284U_201016-1_223608/17302657/ccs	chr6	-	3863	22	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_20	129.939965206333	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	3	True	NA	-2	True	TTTAAA	-5	NA	29609622	29540825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589027_29589229_29609364
m54284U_201016-1_223608/21104011/ccs	chr4	+	3662	13	NNC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	436	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_1	1255.58957764868	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGCTTTCATGATTCCT	2817	False	NA	28	True	AATAAA	-21	NA	140429219	140450531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_140429293_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
m54284U_201016-1_223608/24773998/ccs	chr1	+	2929	13	NIC	ENSMUSG00000026280.18	novel	513	6	NA	NA	0	-1176	combination_of_known_junctions	FALSE	canonical	2	16	junction_1	90.4551761309926	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTGTGTGTGTGTTGA	NA	False	NA	NA	False	GATAAA	-22	NA	93679221	93717156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_93679304_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
m54284U_201016-1_223608/27001282/ccs	chr2	+	4418	9	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	0	0	intron_retention	TRUE	canonical	1	4	junction_1	36.4245796132227	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCATTCCTAGTATTAA	NA	False	NA	126	True	AATAAA	-24	NA	173918110	173941564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_173918932_173926438_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
m54284U_201016-1_223608/38208888/ccs	chr13	-	2666	15	NIC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_11	2229.34046827069	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	5157	False	NA	-8	True	AATACA	-15	NA	58549924	58538955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
m54284U_201016-1_223608/39454720/ccs	chr14	-	3389	10	NNC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	221.475411783546	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTGAATTTGTATTTA	NA	False	NA	-8	True	AATAAA	-21	NA	67309893	67252122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276419_67307683_67307759_67309538
m54284U_201016-1_223608/47120464/ccs	chr13	+	2277	6	NNC	ENSMUSG00000021756.13	novel	3004	6	NA	NA	0	498	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	158.377523657873	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCTTCTGCATAGCTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	112600645	112620648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112619103
m54284U_201016-1_223608/47317444/ccs	chr9	-	1982	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4355	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_8	53.8573056789884	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27033491	27008679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
m54284U_201016-1_223608/47318227/ccs	chr19	-	2416	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	690	junction_19	186.942819408855	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGCTTTGTCTGCCTC	5059	False	NA	-3	True	AATAAA	-14	NA	53027072	52979613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53026944
m54284U_201016-1_223608/54004107/ccs	chr9	-	4087	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_16	276.386158469902	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526585	108480145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521565_108522131_108522194_108523130_108523296_108526427
m54284U_201016-1_223608/54067378/ccs	chr6	+	3123	22	NIC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	204	junction_1	97.2284170361992	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATATTCCCATTGTCTT	NA	False	NA	19	True	AATAAA	-20	NA	47430837	47503073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_47430964_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
m54284U_201016-1_223608/54069724/ccs	chr2	-	2223	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_5	166.375148384607	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174332	152158253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
m54284U_201016-1_223608/55247075/ccs	chr2	+	3489	17	NIC	ENSMUSG00000027263.13	novel	4250	18	NA	NA	0	-634	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	56.955266163455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTTTGTTTGCTGTAC	NA	False	NA	19	True	AATAAA	-20	NA	121001720	121028616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
m54284U_201016-1_223608/5899719/ccs	chr11	+	2629	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-3959	combination_of_known_splicesites	FALSE	canonical	3	262	junction_2	2165.33416358769	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCATCTGGCAATGT	NA	False	NA	13	True	ATTAAA	-14	NA	55360543	55391705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55376451_55376565_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
m54284U_201016-1_223608/62392309/ccs	chr17	-	5604	18	NNC	ENSMUSG00000061665.8	novel	5364	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_11	66.4230959957521	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	False	NA	-3	True	AATAAA	-17	NA	43187556	43103841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136787_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
m54284U_201016-1_223608/62850190/ccs	chr7	-	3261	12	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	659	0	intron_retention	FALSE	canonical	3	93	junction_3	15.4117053292952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8173	False	NA	-6	True	AATAAA	-15	NA	19296342	19264724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
m54284U_201016-1_223608/63898462/ccs	chr10	+	2669	13	NIC	ENSMUSG00000019878.9	novel	2430	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_11	71.7650487509221	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTCCTTCTCATTGTT	NA	False	NA	13	True	NA	NA	NA	57362480	57389231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57385211_57387539_57387625_57387998
m54284U_201016-1_223608/64488921/ccs	chr17	-	4930	11	NIC	ENSMUSG00000037326.11	novel	5216	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	23.9282260103001	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTTGCATTCTGTTGTC	1722	False	NA	-9	True	AATAAA	-18	NA	26204770	26177340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26178708_26178780_26178960_26179038_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26204444
m54284U_201016-1_223608/66126918/ccs	chr12	+	7032	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	0	824	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	115.531741670129	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTGACTTGTGTTTGT	NA	False	NA	14	True	ATTAAA	-23	NA	52550798	52616442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_52550832_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
m54284U_201016-1_223608/66258341/ccs	chr11	-	3674	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_13	1072.77340599599	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8190	False	NA	-54	True	AATAAA	-22	NA	50216446	50185293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202481_50202612_50216319
m54284U_201016-1_223608/68946160/ccs	chr14	-	5468	13	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	0	-332	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_12	27.8581476212775	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGATGTGTTTTGTG	NA	False	NA	-5	True	AGTAAA	-19	NA	34224485	34133022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182573_34224351
m54284U_201016-1_223608/69993946/ccs	chr2	+	1627	7	NNC	ENSMUSG00000061689.16	novel	4840	13	NA	NA	9322	0	intron_retention	FALSE	canonical	3	40	junction_1	119.417219119448	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACAGCGTTTCTCACCC	NA	False	NA	11	True	ATTAAA	-14	NA	156572733	156604875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_156572978_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
m54284U_201016-1_223608/75892730/ccs	chr9	-	1943	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5163	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_8	47.0729155141255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27032683	27008679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
m54284U_201016-1_223608/78383417/ccs	chr9	+	2455	13	NIC	ENSMUSG00000001833.18	novel	2516	14	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	380.283474310064	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTGTCTTGTAT	NA	False	NA	17	True	AATAAA	-17	NA	25163802	25219862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
m54284U_201016-1_223608/79628663/ccs	chr2	+	4406	8	NNC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	23.5554058096468	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCATTCCTAGTATTAA	NA	False	NA	126	True	AATAAA	-24	NA	173918110	173941564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_173918932_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
m54284U_201016-1_223608/80085916/ccs	chr17	+	1766	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	665	junction_1	102.378167868928	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAGTACAGTTCATTTC	NA	False	NA	146	True	TTTAAA	-7	NA	56316207	56323790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
m54284U_201016-1_223608/83034905/ccs	chr11	+	2681	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8326	1684	at_least_one_novel_splicesite	FALSE	canonical	3	288	junction_1	100.158312186258	59	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGGACGCAT	9530	False	NA	NA	False	NA	NA	NA	104200532	104220945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_104200605_104201094_104201361_104212176_104212259_104213253_104213367_104218797
m54284U_201016-1_223608/8323276/ccs	chr13	+	2494	16	NIC	ENSMUSG00000057649.7	novel	2430	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	34.8873743478768	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCGTCCGCTTTGATG	NA	False	NA	29	True	AATAAA	-26	NA	74085929	74109014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090749_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
m54284U_201016-1_223608/87360440/ccs	chr7	-	3398	21	NIC	ENSMUSG00000030766.16	novel	3372	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	48.4230317101274	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122969126	122878497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
m54284U_201016-1_223608/89785180/ccs	chr4	-	3687	14	NIC	ENSMUSG00000028693.16	novel	2118	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	774	junction_11	207.002729879378	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCTTGTTCTGGAATT	NA	False	NA	NA	False	AATAAA	-16	NA	116484694	116458248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
m54284U_201016-1_223608/90442421/ccs	chr15	+	2765	2	NNC	ENSMUSG00000050328.3	novel	1031	2	NA	NA	-4777	2246	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTTTTGAGAACCAT	NA	False	NA	21	True	ATTAAA	-18	NA	102840414	102849290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_102840603_102846713
m54284U_201016-1_223608/92277259/ccs	chr7	+	4982	12	NIC	ENSMUSG00000025326.13	novel	9856	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	67.1986078171415	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTGTGTTCTTCAGTT	NA	False	NA	9	True	AATAAA	-9	NA	58878549	58956477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_58879020_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
m54284U_201201_044215/100010399/ccs	chr3	-	3759	18	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	124	junction_17	34.3116189829602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993967	107981377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_107982438_107982564_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
m54284U_201201_044215/100010820/ccs	chr18	+	4479	21	NIC	ENSMUSG00000024400.17	novel	4575	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_19	111.330543877231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAGCACCCACTGTGCAG	5655	False	NA	39	True	AATACA	-22	NA	31937150	32040450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32037288_32037505_32039818
m54284U_201201_044215/100073479/ccs	chr3	-	1217	10	NIC	ENSMUSG00000059743.13	novel	1237	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	738.196166507869	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTTTTATTCTTGT	NA	False	NA	-3	True	AATAAA	-14	NA	89009198	89000894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89001151_89001537_89001673_89001758_89001885_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
m54284U_201201_044215/100073627/ccs	chr16	+	2625	15	NIC	ENSMUSG00000003235.14	novel	2554	16	NA	NA	74	0	intron_retention	FALSE	canonical	3	2657	junction_7	155.865981155712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	False	NA	27	True	AGTAAA	-18	NA	20317640	20328073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
m54284U_201201_044215/100073790/ccs	chr17	+	1091	2	Antisense	novelGene_ENSMUSG00000073377.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	64841683	64843390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_64841801_64842416
m54284U_201201_044215/100073874/ccs	chr7	-	4820	19	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	190	junction_18	27.5721276332136	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCACATGCTGTCCCC	NA	False	NA	-9	True	AATAAA	-21	NA	19338411	19314967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
m54284U_201201_044215/100074978/ccs	chrX	+	747	1	FSM	ENSMUSG00000081684.5	ENSMUST00000117295.2	882	1	198	-63	198	63	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCACGGACCACAACT	NA	False	NA	NA	False	AATAAA	-40	NA	51987662	51988409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_51987700_51988400
m54284U_201201_044215/100075130/ccs	chr1	+	1369	5	NIC	ENSMUSG00000026547.16	novel	1586	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	491.019602460024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGTTTCTAGGGCC	NA	False	NA	29	True	AATAAA	-26	NA	172327811	172334947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_172327900_172332705_172332895_172333327_172333503_172333752_172333856_172334133
m54284U_201201_044215/100139911/ccs	chr2	-	2296	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	16	junction_6	88.3547507691073	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	59	True	ATTAAA	-23	NA	73605690	73442679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
m54284U_201201_044215/100206475/ccs	chr11	-	1998	4	NIC	ENSMUSG00000034120.19	novel	1336	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_2	824.490145483862	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATGTGTCCTGGTCTTT	6003	False	NA	-10	True	ATTAAA	-26	NA	116743920	116740731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116741788_116742473_116742578_116742846_116743158_116743393
m54284U_201201_044215/100270600/ccs	chr10	+	1752	8	NIC	ENSMUSG00000020211.16	novel	2213	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1171	junction_6	126.117211436061	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	4886	False	NA	29	True	ATTAAA	-17	NA	80634565	80640758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639558_80639653_80639723_80639805
m54284U_201201_044215/10027862/ccs	chr11	-	166	1	Intergenic	novelGene_5746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGTACAGATCTGGTG	NA	False	NA	NA	False	NA	NA	NA	23701602	23701436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23701400_23701600
m54284U_201201_044215/10028511/ccs	chr9	+	3498	5	NIC	ENSMUSG00000038884.15	novel	3210	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_3	17.1227188261678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	False	NA	19	True	AATAAA	-28	NA	20779953	20785603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20780233_20780625_20782532_20782671_20782822_20784163_20784561_20784837
m54284U_201201_044215/10029007/ccs	chr8	-	1761	10	NIC	ENSMUSG00000031774.9	novel	828	9	NA	NA	0	717	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	230.771063937005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3861	False	NA	-4	True	AATAAA	-23	NA	95328354	95301567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95323678_95323737_95328124_95328213_95328309
m54284U_201201_044215/10029716/ccs	chr4	+	1690	2	Genic_Genomic	ENSMUSG00000074738.3	novel	2140	1	NA	NA	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCACTGTCTTGTGTGT	NA	False	NA	8	True	NA	NA	NA	155778798	155780938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_+_155780366_155780815
m54284U_201201_044215/100336426/ccs	chrX	+	4539	29	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	345	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_25	40.8997498869654	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	18	True	AATAAA	-22	NA	99669687	99770820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99762099_99762277_99768247_99768365_99769733_99769857_99770064
m54284U_201201_044215/100337642/ccs	chr19	+	2750	13	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	73.4296715685605	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5720	False	NA	6	True	AATAAA	-17	NA	3901772	3944369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_3902414_3914647_3914760_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
m54284U_201201_044215/100337765/ccs	chr15	-	1818	12	NNC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	174.707973581797	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCACTTTGCTCAG	7107	False	NA	NA	False	AGTAAA	-19	NA	83348807	83259807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_83260018_83261892_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
m54284U_201201_044215/100338144/ccs	chr10	+	190	1	Intergenic	novelGene_5596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAGAGTAAAAGGTT	NA	False	NA	NA	False	NA	NA	NA	126758915	126759105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_126758900_126759100
m54284U_201201_044215/100401907/ccs	chr11	-	187	1	Intergenic	novelGene_6310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTTGAGCCGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	98924844	98924657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_98924700_98924800
m54284U_201201_044215/100402986/ccs	chr11	+	9480	20	NIC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-55	-587	combination_of_known_junctions	FALSE	canonical	2	14	junction_4	26.2976779780271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCACTGTGCTCTCGC	NA	False	NA	41	True	AATAAA	-28	NA	53241604	53312070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
m54284U_201201_044215/100403005/ccs	chr4	-	553	5	NNC	ENSMUSG00000028470.11	novel	610	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	311.572924850668	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATCCCTGTCTTAAA	-12	True	NA	-5	True	AATAAA	-16	NA	43656466	43654226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_43654412_43654512_43654586_43654715_43654762_43654905_43655047_43656358
m54284U_201201_044215/100467207/ccs	chr7	-	184	1	Intergenic	novelGene_3755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGAGTACTGGCTTTGA	NA	False	NA	NA	False	NA	NA	NA	28937109	28936925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28936900_28937100
m54284U_201201_044215/100468913/ccs	chr1	-	2526	3	NNC	ENSMUSG00000040723.15	novel	2622	7	NA	NA	51024	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	12	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGGTTGGTTCTTATTCT	NA	False	NA	-2	True	AATAAA	-11	NA	165484593	165476515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_165477780_165482873_165483606_165484063
m54284U_201201_044215/100469449/ccs	chr17	-	3164	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_20	79.2377908576457	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5674	False	NA	-17	True	TATAAA	-18	NA	25946393	25938019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
m54284U_201201_044215/100532897/ccs	chr1	+	176	2	Antisense	novelGene_ENSMUSG00000073538.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	271	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAGCAAATGAAG	NA	False	NA	NA	False	NA	NA	NA	153287688	153292536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_153287738_153292409
m54284U_201201_044215/100533627/ccs	chr8	-	2193	17	NIC	ENSMUSG00000031660.14	novel	3625	17	NA	NA	0	473	combination_of_known_junctions	FALSE	canonical	3	37	junction_4	122.717663765246	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTCGCTGGTGTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	89088642	89058941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
m54284U_201201_044215/100598358/ccs	chr2	+	2704	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	983	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_9	824.293952853021	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896542	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201201_044215/100599037/ccs	chr14	-	1769	13	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	0	664	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	63.7296808576838	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127733	58072484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_58073012_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
m54284U_201201_044215/100599918/ccs	chr6	-	2509	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	443	junction_6	133.55213528621	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
m54284U_201201_044215/100795573/ccs	chr15	-	3188	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	0	345	intron_retention	FALSE	canonical	3	2899	junction_10	221.796393429668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCTCTGTCCTCACG	NA	False	NA	-5	True	AATAAA	-18	NA	11399687	11383745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
m54284U_201201_044215/100796582/ccs	chr1	-	146	1	Intergenic	novelGene_227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATAATAAAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	86308694	86308548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_86308500_86308700
m54284U_201201_044215/100926111/ccs	chrX	+	4782	9	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3075	junction_4	325.581019102773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100489835_100491199
m54284U_201201_044215/100926247/ccs	chr7	+	5379	13	NNC	ENSMUSG00000035704.18	novel	2039	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	47.0841445357847	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCACATTCACTTTCCT	NA	False	NA	63	True	NA	NA	NA	97020812	97041392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_97020940_97022875_97022955_97023933_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037689_97037796_97039448_97039547_97040095_97040169_97040734
m54284U_201201_044215/10093592/ccs	chr19	+	1291	10	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1012	junction_7	81.959038248489	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATCCTGGACCTTTT	963	False	NA	21	True	AATAAA	-14	NA	8713190	8717981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8713270_8713350_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
m54284U_201201_044215/10093848/ccs	chr8	+	175	1	Intergenic	novelGene_4264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTCTAAAAAATGAC	NA	False	NA	NA	False	NA	NA	NA	34439000	34439175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_34439000_34439200
m54284U_201201_044215/10093884/ccs	chr3	+	6544	39	NIC	ENSMUSG00000041977.19	novel	5603	39	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_20	20.8896487242537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6185	False	NA	12	True	AAGAAA	-13	NA	87524898	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
m54284U_201201_044215/10095295/ccs	chr19	-	5361	24	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	0	2713	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	19.5313716914923	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTGTTCTCTTCCTTC	9860	False	NA	-1	True	AATAAA	-23	NA	40502223	40280483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
m54284U_201201_044215/101056941/ccs	chr7	+	3539	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_12	38.4154012806785	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCTTTTATTTGGTTC	NA	False	NA	23	True	AATAAA	-25	NA	130467616	130515042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
m54284U_201201_044215/101124474/ccs	chr12	+	1730	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	128.442792792777	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201201_044215/101187941/ccs	chr4	-	3246	4	NIC	ENSMUSG00000043085.15	novel	1671	6	NA	NA	-91	0	intron_retention	FALSE	canonical	3	77	junction_1	16.391054470859	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCGTTGAGGATCACAGT	NA	False	NA	-4	True	AATAAA	-16	NA	141345383	141341543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141342018_141342255_141344781_141344950_141345024_141345209
m54284U_201201_044215/101189371/ccs	chr11	-	3814	22	NIC	ENSMUSG00000034187.19	novel	3766	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_21	89.2116899491472	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTATAGACCAGTATTT	NA	False	NA	NA	False	AATAAA	-19	NA	103844882	103712607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103821901_103821950_103844795
m54284U_201201_044215/101189850/ccs	chr17	+	182	1	Intergenic	novelGene_8600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAGTTTTTTACTTGTC	NA	False	NA	NA	False	NA	NA	NA	43300101	43300283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_43300100_43300300
m54284U_201201_044215/101190115/ccs	chr8	+	4105	22	NNC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	20.3039265440598	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2642	False	NA	7	True	NA	NA	NA	106331886	106348851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345448_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
m54284U_201201_044215/101254112/ccs	chr15	-	3932	14	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	5069	junction_9	549.323338460614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	377	False	NA	-7	True	AATAAA	-16	NA	36609217	36595904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
m54284U_201201_044215/101320938/ccs	chr7	-	743	5	NNC	ENSMUSG00000030869.12	novel	1416	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	267	junction_1	2197.68361007676	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTTTCTCAATTAGT	6393	False	NA	-13	True	AATAAA	-14	NA	121701074	121690055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_121690291_121690808_121690909_121692839_121692928_121695831_121695955_121700877
m54284U_201201_044215/101321225/ccs	chr4	+	2099	9	NIC	ENSMUSG00000028757.5	novel	2120	11	NA	NA	129	-402	intron_retention	FALSE	canonical	3	2261	junction_7	68.9524292537979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCACCTGGCCCCATGA	NA	False	NA	32	True	AATAAA	-18	NA	138032169	138039537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038842_138038950_138039058_138039144
m54284U_201201_044215/101385021/ccs	chr7	+	1046	9	NIC	ENSMUSG00000030982.20	novel	1102	9	NA	NA	0	-71	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	189.52226122543	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTAATTTTCTTTCAAT	NA	False	NA	NA	False	GATAAA	-16	NA	118339969	118361298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118360988
m54284U_201201_044215/101385704/ccs	chr4	+	3791	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	551.568369893222	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4706	False	NA	23	True	AATAAA	-28	NA	135583442	135597219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590836_135590888_135594436
m54284U_201201_044215/101385873/ccs	chr1	-	1251	6	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	243	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	366.673369635702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978048
m54284U_201201_044215/101386045/ccs	chr15	-	1980	7	NIC	ENSMUSG00000033055.13	novel	1904	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_5	6.51707159867238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCTGGTTGTTGTTTTT	NA	False	NA	-10	True	NA	NA	NA	78947093	78937303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_78938285_78938695_78938804_78939491_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
m54284U_201201_044215/101450724/ccs	chr14	-	2601	9	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	157	junction_8	1608.14391749464	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52334778_52336002_52341345
m54284U_201201_044215/101452195/ccs	chr13	-	4004	8	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	2476	junction_5	479.670550205757	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100922994	100915239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100920156_100921964_100922127_100922240_100922412_100922889
m54284U_201201_044215/101452308/ccs	chr11	-	1332	12	NIC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	176.559076339951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTGTATACTGCCATT	NA	False	NA	-21	True	AGTAAA	-16	NA	101308232	101297664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302051_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
m54284U_201201_044215/101452429/ccs	chr9	+	4193	24	NNC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	111.632092193784	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974184	80051453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043896_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
m54284U_201201_044215/101452491/ccs	chr5	+	162	1	Intergenic	novelGene_3019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGGAGCTGGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	140371621	140371783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_140371600_140371800
m54284U_201201_044215/101517822/ccs	chr1	+	1849	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_2	126.880950146994	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954339	171962850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_171954416_171956197_171956308_171956771_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
m54284U_201201_044215/10158104/ccs	chr10	+	969	12	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1520.20222121546	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657776	128713498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
m54284U_201201_044215/101581258/ccs	chr12	+	2855	7	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	289	junction_6	724.102202731079	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992307	80997281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996490
m54284U_201201_044215/101582735/ccs	chr11	-	1730	6	NNC	ENSMUSG00000025132.14	novel	1867	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	1344.78616887593	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATTGTGTGGTCTGTGC	NA	False	NA	-15	True	AATAAA	-17	NA	120472450	120468934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120470125_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
m54284U_201201_044215/10158455/ccs	chr2	-	3570	10	NNC	ENSMUSG00000026779.7	novel	1201	7	NA	NA	0	-9374	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	46.3896540189728	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTCTTAAATCAGTGTT	NA	False	NA	NA	False	ATTAAA	-28	NA	23045909	23014991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_23016302_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
m54284U_201201_044215/10160685/ccs	chr3	+	4963	19	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_1	23.362415738442	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009975	103077054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
m54284U_201201_044215/10160757/ccs	chr18	-	2579	15	NNC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_14	1336.50887748336	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649599	64632728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649517
m54284U_201201_044215/10160961/ccs	chr18	-	2663	16	NIC	ENSMUSG00000024587.11	novel	2745	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_14	1703.51520751129	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACACTTTGCTGACTT	NA	False	NA	NA	False	AATAAA	-23	NA	64649599	64632725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64647885_64647936_64648396_64648480_64649486
m54284U_201201_044215/101647210/ccs	chr11	-	3902	20	NIC	ENSMUSG00000034329.17	novel	6931	20	NA	NA	0	-3064	combination_of_known_junctions	FALSE	canonical	3	7	junction_19	19.7350876413186	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTCTTCATTGGAAT	NA	False	NA	-24	True	GATAAA	-22	NA	86092019	85952027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091899
m54284U_201201_044215/101647918/ccs	chr14	+	4343	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	186.073836729721	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
m54284U_201201_044215/101648443/ccs	chr7	-	341	2	NNC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	-222	-1270	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGTCTAACTTCCAAGG	7778	False	NA	-31	True	AGTAAA	-19	NA	141055267	141053042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_141053318_141055201
m54284U_201201_044215/101712338/ccs	chr2	+	3593	11	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_9	145.637769826374	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAACTTTTTCCTTTTA	NA	False	NA	27	True	AATAAA	-24	NA	60040256	60079555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60077831_60077857_60078233
m54284U_201201_044215/101714376/ccs	chr6	-	5068	9	NIC	ENSMUSG00000030189.16	novel	1684	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2150	junction_4	354.022046453325	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGTAACTAGTGTGTA	4933	False	NA	-9	True	AATAAA	-21	NA	131365439	131341817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
m54284U_201201_044215/101714404/ccs	chr4	+	1744	6	NIC	ENSMUSG00000028797.21	novel	875	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	299.030834530488	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGCAAATGTTTTATTT	3197	False	NA	16	True	AATAAA	-16	NA	129494493	129502321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129494525_129494775_129495037_129495199_129495419_129495987_129496055_129500879_129500973_129501248
m54284U_201201_044215/101714657/ccs	chr5	+	1694	11	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	113.163421652051	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	18	True	AATAAA	-18	NA	135398823	135404997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402104_135402228_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
m54284U_201201_044215/101714690/ccs	chr17	+	3791	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_23	173.132661274527	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8796	False	NA	32	True	AATAAA	-33	NA	35354461	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
m54284U_201201_044215/101777883/ccs	chr17	+	938	6	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	652.177889842948	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47679880_47683351_47683417_47685897_47686035_47686858_47686968_47688684_47688775_47689126
m54284U_201201_044215/101908642/ccs	chr13	+	82	1	Intergenic	novelGene_7200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCCGGACAAACATTCATA	NA	False	NA	NA	False	NA	NA	NA	70252361	70252443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_70252400_70252400
m54284U_201201_044215/101910664/ccs	chr13	+	2572	24	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_14	220.934174049104	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59766044_59766093_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201201_044215/101976052/ccs	chr5	+	1699	1	FSM	ENSMUSG00000107331.2	ENSMUST00000202887.2	1197	1	879	-1381	879	1381	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73469585	73471284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_73469600_73471300
m54284U_201201_044215/101976391/ccs	chr17	+	168	1	Intergenic	novelGene_8728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACCCTAATAGATTT	NA	False	NA	NA	False	NA	NA	NA	74996549	74996717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_74996500_74996700
m54284U_201201_044215/102105160/ccs	chr9	-	176	1	Intergenic	novelGene_4886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGAGAGAGTTGGGT	6685	False	NA	NA	False	NA	NA	NA	65523119	65522943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65522900_65523100
m54284U_201201_044215/102171859/ccs	chr10	+	4435	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_13	57.2123902664449	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGGATTCTTTGGCTT	NA	False	NA	20	True	AATAAA	-29	NA	128139203	128157227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
m54284U_201201_044215/102236982/ccs	chr7	+	3622	20	NIC	ENSMUSG00000039361.12	novel	3528	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	45.9396207370349	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACGGTGTTCTGGTTTG	NA	False	NA	19	True	AATAAA	-20	NA	89779437	89858140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
m54284U_201201_044215/102237316/ccs	chr6	+	1389	7	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	89.2070002235749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2335	False	NA	14	True	AATAAA	-23	NA	113303959	113311149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113304324_113305325_113305441_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
m54284U_201201_044215/10225045/ccs	chrX	-	1102	9	NIC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	0	303	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	115.823141038395	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161284
m54284U_201201_044215/102301904/ccs	chr5	-	195	1	Intergenic	novelGene_2973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGATATAGTAATAAC	NA	False	NA	NA	False	NA	NA	NA	135182774	135182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135182600_135182800
m54284U_201201_044215/102302812/ccs	chr4	-	6899	14	NIC	ENSMUSG00000028438.17	novel	5593	13	NA	NA	0	1114	combination_of_known_junctions	TRUE	canonical	3	20	junction_12	9.0651814539423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTCTATGCCTAGGTG	-33	True	NA	NA	False	AATACA	-16	NA	41464887	41389630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41429266_41429412_41464709
m54284U_201201_044215/102303361/ccs	chr17	+	2231	11	NIC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3235	junction_7	186.904280314818	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCCTGTCCTCAGTTT	NA	False	NA	5	True	ATTAAA	-20	NA	13135328	13143449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
m54284U_201201_044215/102367343/ccs	chr11	-	1176	7	NIC	ENSMUSG00000018442.14	novel	1466	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	209.920619917784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	False	NA	-9	True	AATAAA	-20	NA	70910095	70900758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909934
m54284U_201201_044215/102367733/ccs	chr9	+	1599	11	NIC	ENSMUSG00000036138.17	novel	1762	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	84.7362968272747	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7848	False	NA	28	True	AGTAAA	-19	NA	119170479	119179365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
m54284U_201201_044215/102433602/ccs	chr19	+	6359	40	NNC	ENSMUSG00000024773.16	novel	6371	40	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_17	22.554193628461	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCCCCACTCTGTCTA	8944	False	NA	55	True	NA	NA	NA	6291697	6312365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301747_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
m54284U_201201_044215/102434187/ccs	chr6	-	4097	6	NIC	ENSMUSG00000029569.10	novel	4587	5	NA	NA	0	-607	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	105.174901949087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGCTTTTAGAGTTT	-13	True	NA	NA	False	ATTAAA	-19	NA	13608043	13581292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13605785_13605959_13607828
m54284U_201201_044215/102499050/ccs	chr9	+	4219	11	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_2	83.9083428509943	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_19533582_19535527_19535595_19536795_19536934_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
m54284U_201201_044215/102631797/ccs	chr14	+	1570	12	NIC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_11	474.427937382059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTTTATTCTTTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	73790205	73833223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813_73832914_73833112
m54284U_201201_044215/102696985/ccs	chr11	-	3171	13	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	67.9384934252217	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGAATGTTGAAACACAA	NA	False	NA	-45	True	NA	NA	NA	59700647	59682615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
m54284U_201201_044215/102760643/ccs	chr4	-	201	1	Intergenic	novelGene_1776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGGAGGCAGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	31422032	31421831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_31421800_31422000
m54284U_201201_044215/102827754/ccs	chr4	-	4010	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_9	35.2686339855951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	-7	True	NA	-7	True	AATAAA	-21	NA	43025819	43017634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
m54284U_201201_044215/10289669/ccs	chr1	-	3276	9	NIC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	0	-207	intron_retention	FALSE	canonical	3	1166	junction_4	87.1040146893356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401489	92367207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_92367630_92379732_92379842_92388101_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
m54284U_201201_044215/10289783/ccs	chr9	+	1879	10	NIC	ENSMUSG00000032123.6	novel	2205	9	NA	NA	0	-288	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	85.6912344077327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTAGCATCCCCTCCCTCT	3480	False	NA	23	True	AATAAA	-26	NA	44237847	44244903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_44238117_44238442_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
m54284U_201201_044215/103022619/ccs	chr5	-	4111	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	64	junction_13	176.439469507251	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201201_044215/103023085/ccs	chr11	+	3642	26	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-1096	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	169.618744247209	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	NA	False	NA	40	True	AATAAA	-25	NA	115721697	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115721918_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
m54284U_201201_044215/103024486/ccs	chr9	+	182	1	Intergenic	novelGene_4744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAAGGGTCTCAGTGC	6977	False	NA	NA	False	NA	NA	NA	45913946	45914128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_45913900_45914100
m54284U_201201_044215/103024794/ccs	chr6	+	4827	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	85.466943317285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891352	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
m54284U_201201_044215/103024906/ccs	chr15	+	2607	10	NNC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	67.1357570639016	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	8	True	AATAAA	-15	NA	84921325	84947031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_84921446_84923040_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
m54284U_201201_044215/103089092/ccs	chr16	-	1662	10	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_6	39.6842475822944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400703	93380347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93393185_93393224_93396099_93396196_93398525_93398687_93400453
m54284U_201201_044215/103090861/ccs	chr11	-	3219	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9015	0	at_least_one_novel_splicesite	TRUE	canonical	3	95	junction_14	498.38029492281	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615168
m54284U_201201_044215/103155578/ccs	chr11	+	757	6	NNC	ENSMUSG00000020412.17	novel	4844	19	NA	NA	0	-31954	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	127.679912280672	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGAATTATTTATTT	NA	False	NA	NA	False	AATAAA	-35	NA	4587746	4601431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4601308
m54284U_201201_044215/103284760/ccs	chr2	+	3267	8	NNC	ENSMUSG00000027465.14	novel	3386	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	59.9952379062586	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTTTGTATCATCGC	NA	False	NA	28	True	AATAAA	-23	NA	152135791	152155916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153311_152153425_152153629
m54284U_201201_044215/103285294/ccs	chr14	+	3984	13	NIC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	112.641762533559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438690	59474714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_59439034_59443073_59443172_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
m54284U_201201_044215/103285908/ccs	chr17	+	3533	24	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_23	189.724853007642	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8820	False	NA	32	True	AATAAA	-33	NA	35354485	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
m54284U_201201_044215/103350950/ccs	chr19	+	5291	13	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	18.9839113169254	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214113	25411860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
m54284U_201201_044215/103351319/ccs	chr6	+	9750	59	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	0	0	combination_of_known_junctions	TRUE	non_canonical	0	0	junction_26	14.5585047121273	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108190056	108528070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
m54284U_201201_044215/103352273/ccs	chr15	-	205	1	Intergenic	novelGene_7741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGTATTGCATACAGTG	NA	False	NA	NA	False	TTTAAA	-8	NA	63375017	63374812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_63374800_63375000
m54284U_201201_044215/103352350/ccs	chr4	+	4336	22	NNC	ENSMUSG00000028397.14	novel	1844	8	NA	NA	187	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	71.2580822483617	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	False	NA	14	True	ATTAAA	-15	NA	74170359	74324097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_74170651_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
m54284U_201201_044215/103416389/ccs	chr11	-	2648	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-26093	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_10	155.114022576942	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	NA	False	NA	-2	True	AATAAA	-19	NA	113482698	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607
m54284U_201201_044215/103416637/ccs	chrX	+	3764	7	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	856	junction_4	309.180457913426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72246536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72243451_72245455_72245552_72245645
m54284U_201201_044215/103417545/ccs	chr7	+	1526	10	NIC	ENSMUSG00000030805.15	novel	1456	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	172	junction_3	25.7681974534502	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTGCAGTGTGTTC	NA	False	NA	NA	False	NA	NA	NA	127440935	127448191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447840_127447922
m54284U_201201_044215/103482209/ccs	chr12	-	1322	9	NNC	ENSMUSG00000021114.10	novel	3667	9	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	342.574809348265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAATGATTTTAAAAACA	55	False	NA	-21	True	TTTAAA	-18	NA	78908326	78889775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896495_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
m54284U_201201_044215/103483250/ccs	chr14	-	2463	11	NIC	ENSMUSG00000022052.10	novel	2192	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	281.93305943078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGAATCTGGTTTTCTTT	NA	False	NA	-5	True	AATAAA	-13	NA	67309893	67253122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276422_67307683_67307759_67309538
m54284U_201201_044215/103614070/ccs	chr16	-	662	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8907	-42762	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	15	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTGAGTATCACTTTT	NA	False	NA	NA	False	NA	NA	NA	8601265	8566585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_8566919_8574679_8574937_8601193
m54284U_201201_044215/103678455/ccs	chr6	+	5183	18	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	0	679	combination_of_known_splicesites	FALSE	canonical	2	7	junction_16	9.86903865001209	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCAGTTGTCCTTGCA	NA	False	NA	16	True	AGTAAA	-17	NA	86826498	86975283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86959523_86959626_86972821
m54284U_201201_044215/103678858/ccs	chr6	-	2512	12	NIC	ENSMUSG00000030177.15	novel	2610	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	82.5612720127521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGGCTCTACAAAGTC	NA	False	NA	-14	True	AATAAA	-18	NA	120334338	120301283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319039_120325348_120325492_120327167_120327352_120330961_120331016_120334287
m54284U_201201_044215/103680681/ccs	chr3	-	1599	1	FSM	ENSMUSG00000047674.3	ENSMUST00000057860.3	2352	1	546	207	546	-207	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTAGATTTTTGATTTT	NA	False	NA	-1	True	AATAAA	-15	NA	140917570	140915971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_140916000_140917600
m54284U_201201_044215/103743981/ccs	chr6	-	4410	28	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_16	141.806171931285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71609889	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588882_71589001_71590815_71590980_71593801_71593855_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
m54284U_201201_044215/103744275/ccs	chr11	+	4624	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-380	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	78.5193766977732	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCAATGGTACAGTA	NA	False	NA	33	True	AATAAA	-29	NA	21188900	21271136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
m54284U_201201_044215/103744708/ccs	chr19	+	159	1	Intergenic	novelGene_9312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAGAAAACA	9269	False	NA	NA	False	NA	NA	NA	46277115	46277274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46277100_46277300
m54284U_201201_044215/103745952/ccs	chr13	+	1207	3	NNC	ENSMUSG00000078941.10	novel	1298	5	NA	NA	179	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	627	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTGGTACTTTGGCAG	NA	False	NA	NA	False	AATAAA	-19	NA	100787665	100792566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_100787755_100790698_100790792_100791541
m54284U_201201_044215/103746015/ccs	chr10	+	2658	17	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	253.84047032536	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171916	21244797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
m54284U_201201_044215/103811265/ccs	chr1	+	3049	12	NIC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_8	287.720939180615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406742	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93431156_93431241_93433265_93433324_93434684_93434805_93435434
m54284U_201201_044215/103941599/ccs	chr1	-	205	1	Intergenic	novelGene_162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGGTAAGATCTATG	NA	False	NA	NA	False	NA	NA	NA	63221455	63221250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_63221200_63221500
m54284U_201201_044215/104007628/ccs	chr11	+	2947	1	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	0	20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGATTTATCTGTCTAG	NA	False	NA	NA	False	NA	NA	NA	120563881	120566828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_120563900_120566800
m54284U_201201_044215/104008219/ccs	chrX	-	2046	7	NNC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	110.674322024377	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838029	100833953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_100834130_100834212_100834255_100834449_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
m54284U_201201_044215/104008318/ccs	chr15	-	3052	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	153.192326468687	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816969	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
m54284U_201201_044215/104008427/ccs	chr11	-	2564	13	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	287	junction_5	185.301106310783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687229	120680027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
m54284U_201201_044215/104202342/ccs	chr5	-	3012	10	NNC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	83.4476253277438	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	GATAAA	-19	NA	5609523	5587453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_5589452_5592246_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
m54284U_201201_044215/104204835/ccs	chr12	-	1890	5	NNC	ENSMUSG00000021098.15	novel	2051	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	10.917302780449	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGGGTATTTTGCCT	NA	False	NA	NA	False	AATAAA	-21	NA	72964680	72958432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_72960049_72962129_72962257_72963447_72963505_72963596_72963654_72964647
m54284U_201201_044215/10421071/ccs	chr11	-	3487	11	NIC	ENSMUSG00000019373.12	novel	1646	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	617	junction_6	44.1039680754465	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAATGTGTGTTCTCTCA	NA	False	NA	-4	True	ATTAAA	-27	NA	59730664	59708620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
m54284U_201201_044215/10421407/ccs	chr11	+	282	1	Intergenic	novelGene_6125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGTCTTACCCACTGGAG	7577	False	NA	NA	False	NA	NA	NA	83184253	83184535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_83184300_83184500
m54284U_201201_044215/10421642/ccs	chr13	-	2535	15	NIC	ENSMUSG00000006191.18	novel	2629	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	48.9583850774079	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGTTTATTGGACTTT	NA	False	NA	NA	False	AATAAA	-23	NA	30039626	29509283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_29510212_29538612_29538778_29541482_29541567_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
m54284U_201201_044215/104270503/ccs	chr17	+	198	1	Intergenic	novelGene_8781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATCTTCTTAAAAAGTA	NA	False	NA	NA	False	TTTAAA	-7	NA	88402386	88402584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_88402400_88402600
m54284U_201201_044215/104335053/ccs	chr8	+	1176	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	0	1286	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_1	2920.50820705918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57965007	57967529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_57965163_57965612_57965783_57966095_57966242_57966323_57966499_57966999
m54284U_201201_044215/104335862/ccs	chr13	-	2555	15	NIC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_14	30.5478046240141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579539	63459948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550892_63579263
m54284U_201201_044215/104336093/ccs	chr10	-	382	1	Intergenic	novelGene_5396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGTGA	334	False	NA	NA	False	NA	NA	NA	71159515	71159133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_71159100_71159500
m54284U_201201_044215/104398977/ccs	chr18	-	541	1	Intergenic	novelGene_8957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGACGATCTGGCACTA	NA	False	NA	NA	False	NA	NA	NA	50286109	50285568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_50285600_50286100
m54284U_201201_044215/104399872/ccs	chr15	-	2515	1	Intergenic	novelGene_7644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACACTAGAAAAAGACAGG	NA	False	NA	NA	False	ATTAAA	-41	NA	12329269	12326754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_12326800_12329300
m54284U_201201_044215/104400101/ccs	chr12	+	4406	22	NIC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_1	447.931451266836	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750962	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105751073_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
m54284U_201201_044215/104401022/ccs	chr11	-	1252	7	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	1916.82799321054	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	4306	False	NA	-7	True	AATAAA	-19	NA	120489191	120485334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433_120486547_120486745_120486894_120488460_120488593_120488930
m54284U_201201_044215/104465315/ccs	chr4	+	1800	19	NIC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	160.269410526829	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	0	True	NA	12	True	AATAGA	-27	NA	34614968	34660167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
m54284U_201201_044215/104530859/ccs	chr2	+	3024	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1260	junction_6	144.857569893864	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867577	84877453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
m54284U_201201_044215/104530974/ccs	chr15	-	1428	6	NNC	ENSMUSG00000101892.2	novel	1341	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	316.693795329179	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCCCAGGTAATTTCA	NA	False	NA	-20	True	AATAAA	-29	NA	57897721	57885665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895291_57895476_57897479
m54284U_201201_044215/104598116/ccs	chr8	+	3787	12	NNC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_11	123.55405013914	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363199	106409554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408072
m54284U_201201_044215/104661275/ccs	chr10	-	4060	12	NIC	ENSMUSG00000025407.8	novel	4057	13	NA	NA	193	0	intron_retention	FALSE	canonical	2	10	junction_11	7.80972057996892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCACCTGTCATGTTGGG	3019	False	NA	NA	False	AATAAA	-17	NA	127177562	127165750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_127167670_127168269_127168535_127169436_127169668_127170067_127170233_127171831_127171982_127172280_127172419_127172507_127173027_127173258_127173464_127173940_127174034_127174289_127174416_127177073_127177188_127177427
m54284U_201201_044215/104661422/ccs	chrX	+	3139	16	NIC	ENSMUSG00000031065.15	novel	3270	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_1	416.044580944559	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	1860	False	NA	18	True	ATTAAA	-20	NA	20554192	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201201_044215/104661925/ccs	chr8	+	3164	13	NIC	ENSMUSG00000001482.16	novel	3242	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	99.5811715246523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169734	124190009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_124169791_124174055_124174103_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
m54284U_201201_044215/104663039/ccs	chr14	-	5877	6	NIC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	51.808879547815	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335554	65289511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65335445
m54284U_201201_044215/104663639/ccs	chr5	+	2366	12	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	29.8768823536452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940395	52982007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_52940557_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
m54284U_201201_044215/104727152/ccs	chr11	-	176	1	Intergenic	novelGene_5910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATCATAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	62664550	62664374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_62664400_62664600
m54284U_201201_044215/104792307/ccs	chr11	+	3979	27	NIC	ENSMUSG00000055805.16	novel	3824	27	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_15	8.099236577363	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTCGGCTCGGTGCCT	4890	False	NA	23	True	AATAAA	-16	NA	103061774	103089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_103062268_103070341_103070426_103071707_103071822_103072534_103072609_103072911_103072996_103073467_103073594_103073841_103073860_103076446_103076556_103077236_103077314_103077438_103077533_103080751_103080827_103081121_103081233_103082840_103082991_103083504_103083607_103083775_103084029_103084276_103084562_103084753_103084879_103085451_103085655_103086084_103086320_103086435_103086505_103087086_103087168_103087241_103087372_103087510_103087675_103087903_103088006_103088140_103088222_103088483_103088605_103089308
m54284U_201201_044215/104792957/ccs	chr5	-	3121	19	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	567	233	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_18	143.423797894454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTGAGTGGGTGTTT	NA	False	NA	-3	True	AGTAAA	-21	NA	31336626	31314554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336590
m54284U_201201_044215/104857982/ccs	chr6	-	4437	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_4	21.2642225290113	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	143045833	142956653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
m54284U_201201_044215/104858663/ccs	chr16	+	2481	11	NNC	ENSMUSG00000004069.18	novel	2505	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	248.346149557427	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	35	True	TTTAAA	-8	NA	4501978	4525559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524436
m54284U_201201_044215/104858838/ccs	chr10	-	191	1	Intergenic	novelGene_5545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCTCCCTTTAAAATCT	NA	False	NA	NA	False	NA	NA	NA	116181135	116180944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_116180900_116181100
m54284U_201201_044215/104859579/ccs	chr15	+	2847	12	NNC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	185.316615374565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7137	False	NA	30	True	ATTAAA	-41	NA	85743945	85760774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755546_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
m54284U_201201_044215/104859770/ccs	chrX	+	3036	7	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	0	-54	multi-exon	FALSE	canonical	3	49	junction_4	307.710587330946	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATCTAGATGTAAATT	NA	False	NA	-34	True	ATTAAA	-25	NA	67722187	67761515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738687_67755911_67756020_67756846_67756930_67759170
m54284U_201201_044215/10486799/ccs	chr17	-	185	1	Intergenic	novelGene_8630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCCCCCCCCAAAAAAGT	3633	False	NA	NA	False	NA	NA	NA	47808291	47808106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_47808100_47808300
m54284U_201201_044215/104923222/ccs	chr8	-	2895	10	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	191	junction_7	19.9115327336313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578640	106571304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_106571628_106571705_106571811_106571891_106573024_106573279_106573433_106573615_106573811_106575382_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
m54284U_201201_044215/104925951/ccs	chr1	-	207	1	Intergenic	novelGene_137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATATTTTTTAAAA	NA	False	NA	NA	False	AATAAA	-27	NA	59298510	59298303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59298300_59298500
m54284U_201201_044215/104989343/ccs	chr17	-	2666	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	112.156620125682	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5806	False	NA	-30	True	AATAAA	-18	NA	46593952	46568799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
m54284U_201201_044215/104991322/ccs	chr12	-	197	1	Intergenic	novelGene_6795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATACACACATGTATAG	NA	False	NA	NA	False	NA	NA	NA	84283982	84283785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_84283800_84284000
m54284U_201201_044215/104991537/ccs	chr1	-	160	1	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	37523781	37523621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_37523600_37523800
m54284U_201201_044215/1050273/ccs	chr6	-	203	1	Intergenic	novelGene_3367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATATAAGAAAAAAGAAAAG	9572	False	NA	NA	False	NA	NA	NA	86506717	86506514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_86506500_86506700
m54284U_201201_044215/105120727/ccs	chr12	+	5750	6	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	182	junction_4	20.1136769388394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2788	False	NA	22	True	AATAAA	-19	NA	80509993	80544896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80539673_80543554
m54284U_201201_044215/105120910/ccs	chrX	+	4185	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_2	303.130962089845	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100995	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102894_143103058_143105013_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201201_044215/105186421/ccs	chr2	-	3908	1	Genic_Genomic	ENSMUSG00000027423.16	novel	NA	NA	NA	NA	-10	2445	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	144112836	144108928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_144108900_144112800
m54284U_201201_044215/105186997/ccs	chr4	+	158	1	Intergenic	novelGene_2160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	129674908	129675066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129674900_129675100
m54284U_201201_044215/105187275/ccs	chr2	+	2749	14	NNC	ENSMUSG00000039050.9	novel	2805	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	46.788963448571	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGGTTGAAGGTTTGA	NA	False	NA	10	True	ATTAAA	-16	NA	179761127	179804473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_179761263_179778771_179778906_179780032_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
m54284U_201201_044215/105251645/ccs	chr15	+	3458	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_5	198.434701044229	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900569	81924286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909769_81909890_81911425_81911613_81913322_81913492_81913763_81915464_81919877_81919979_81921657_81921772_81923922
m54284U_201201_044215/105252731/ccs	chr9	-	2700	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-136	at_least_one_novel_splicesite	FALSE	canonical	3	162	junction_7	96.2047231971076	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469252	114415169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
m54284U_201201_044215/105253195/ccs	chr2	-	3790	4	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_3	123.64465212859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26277684_26279160
m54284U_201201_044215/105253232/ccs	chr9	+	3602	12	Fusion	ENSMUSG00000103970.2_ENSMUSG00000006673.15	novel	721	3	NA	NA	0	0	multi-exon	FALSE	canonical	3	8	junction_2	279.742207182504	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1659	False	NA	64	True	NA	NA	NA	108394797	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_+_108395176_108395965_108396026_108404111_108404196_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201201_044215/105318587/ccs	chr3	+	2848	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	129.783712884851	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600227	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/105319246/ccs	chr12	-	6879	42	NIC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	0	-667	combination_of_known_junctions	FALSE	canonical	3	50	junction_40	9.83879584241854	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGTTACTGACAAGAGC	NA	False	NA	-12	True	ATTAAA	-14	NA	105651470	105583064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602815_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
m54284U_201201_044215/105383048/ccs	chr2	-	6952	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_17	264.832022232962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9785	False	NA	-6	True	AATAAA	-21	NA	120394324	120337300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120369775_120369974_120376323_120376386_120385711_120385797_120394167
m54284U_201201_044215/105384372/ccs	chrX	-	3297	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1225	junction_3	142.325008917145	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759798	52744867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753054_52753476_52753824_52759728
m54284U_201201_044215/105384395/ccs	chr4	-	2467	3	NNC	ENSMUSG00000047719.3	novel	576	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	31.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGGCTTTGTTTCTT	NA	False	NA	0	True	ATTAAA	-16	NA	148529218	148518951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_148521100_148528384_148528587_148529101
m54284U_201201_044215/105448665/ccs	chr19	+	178	1	Intergenic	novelGene_9333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGATGTGTGGTCTGGGT	6328	False	NA	NA	False	NA	NA	NA	53057744	53057922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_53057700_53057900
m54284U_201201_044215/105513216/ccs	chr10	-	4666	1	Intergenic	novelGene_5532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	108237915	108233249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_108233200_108237900
m54284U_201201_044215/105514194/ccs	chr4	-	1303	3	NNC	ENSMUSG00000045573.10	novel	721	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTAAGAACTGGCTGT	3	True	NA	-7	True	AATAAA	-24	NA	4138819	4133530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_4134508_4138005_4138147_4138634
m54284U_201201_044215/105515841/ccs	chr4	-	3425	7	NNC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	2	32	junction_1	505.318628853782	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTCTTTTTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-19	NA	135000073	134941279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_134943767_134944408_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
m54284U_201201_044215/10551938/ccs	chr3	+	2878	1	NIC	ENSMUSG00000027550.15	novel	3359	19	NA	NA	0	-14717	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAGTGAGGAAAACCTA	NA	False	NA	NA	False	AATGAA	-37	NA	14598938	14601816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_14598900_14601800
m54284U_201201_044215/10553069/ccs	chr12	-	178	1	Intergenic	novelGene_6821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGGAGTCATCATGAAA	NA	False	NA	NA	False	NA	NA	NA	86908356	86908178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_86908200_86908400
m54284U_201201_044215/10554206/ccs	chr16	-	3568	17	NIC	ENSMUSG00000022974.13	novel	2732	18	NA	NA	55	0	intron_retention	FALSE	canonical	3	97	junction_10	90.8908815214706	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAATGAAAGGAACTCAG	NA	False	NA	7	True	AATACA	-41	NA	90841376	90811803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827303_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
m54284U_201201_044215/105578834/ccs	chr13	+	3285	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_14	125.436218445707	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
m54284U_201201_044215/105581373/ccs	chr7	+	2067	13	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_4	15.3803626600791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTAAAGTCTCTGTTCC	580	False	NA	20	True	AATAAA	-21	NA	28092386	28098813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
m54284U_201201_044215/105645256/ccs	chr5	-	2068	11	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_7	179.096761556428	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGTTTTATTT	NA	False	NA	0	True	AATAAA	-25	NA	92582982	92563398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92575958_92576186_92578659_92578813_92578897_92578982_92582862
m54284U_201201_044215/105646538/ccs	chr11	+	1349	10	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	0	60	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	902.530407134557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTATATGTTGTTTT	NA	False	NA	14	True	ATTAAA	-17	NA	107370309	107388619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107386513_107386592_107388349
m54284U_201201_044215/105710464/ccs	chr7	+	197	1	Intergenic	novelGene_4065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGGTAGCCTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	121683433	121683630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_121683400_121683600
m54284U_201201_044215/105710752/ccs	chr17	-	4229	16	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10121	119	intron_retention	FALSE	canonical	0	0	junction_3	262.892238167826	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCAATTGAGTCTGT	2347	False	NA	NA	False	AATAAA	-29	NA	6744542	6708463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
m54284U_201201_044215/105711014/ccs	chr1	+	3050	12	NIC	ENSMUSG00000026199.18	novel	2770	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_4	18.0906806746658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTGTACTTACAGTC	76	False	NA	19	True	AATAAA	-15	NA	75168835	75176031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
m54284U_201201_044215/105775396/ccs	chr4	+	3559	12	NIC	ENSMUSG00000042608.16	novel	3860	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	134.390389758733	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTAGCCTGCCTCTG	NA	False	NA	22	True	AATAAA	-23	NA	125997764	126034822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_125997940_126012066_126012134_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
m54284U_201201_044215/105775948/ccs	chr5	+	4148	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	174.643942542153	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731108	34789652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_34731258_34755512_34755792_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
m54284U_201201_044215/105776545/ccs	chr17	+	4755	14	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	488	junction_10	80.7556765183775	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCGGATGTTCTATAAATT	NA	False	NA	-17	True	NA	NA	NA	32255383	32279547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_32255579_32264902_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
m54284U_201201_044215/105842899/ccs	chr7	-	1505	10	NIC	ENSMUSG00000003438.18	novel	1515	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	2125	junction_8	157.858586504926	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTGTCCAGAGTCC	2656	False	NA	-2	True	AATAAA	-19	NA	28011497	28005248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
m54284U_201201_044215/105843080/ccs	chr3	+	3200	15	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	839	junction_3	66.9193849466106	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTTGTGAAGGTTT	NA	False	NA	11	True	AATAAA	-21	NA	69629364	69656375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69654169_69655630_69655702_69656104
m54284U_201201_044215/105907542/ccs	chr7	-	181	1	Intergenic	novelGene_3702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAGAAGCAGGTGAATC	3129	False	NA	NA	False	NA	NA	NA	24313495	24313314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_24313300_24313500
m54284U_201201_044215/105908691/ccs	chr2	-	3687	11	NNC	ENSMUSG00000027217.14	novel	3751	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_1	10.0776981498753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTCTCATTGGTTGT	NA	False	NA	-11	True	TATAAA	-16	NA	93164850	93032104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_93033454_93033535_93034768_93036044_93036129_93040138_93040322_93041168_93041268_93042162_93042238_93050363_93050559_93053056_93053130_93054841_93054924_93142291_93142373_93164616
m54284U_201201_044215/105973213/ccs	chr8	+	7368	21	NIC	ENSMUSG00000036990.14	novel	7354	21	NA	NA	-192	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	64.8731647139247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGGATTCTTTGGTCT	NA	False	NA	17	True	ATTAAA	-17	NA	80366054	80404301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391647_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
m54284U_201201_044215/105974024/ccs	chr18	+	1510	11	NNC	ENSMUSG00000038903.14	novel	1618	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	9.48946784598589	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCATGTCCTTCCA	NA	False	NA	3	True	AATAAA	-14	NA	70058640	70102555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_70058692_70071916_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
m54284U_201201_044215/105974259/ccs	chr1	-	180	1	Intergenic	novelGene_357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	8668	False	NA	NA	False	NA	NA	NA	136940927	136940747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_136940700_136940900
m54284U_201201_044215/106037538/ccs	chr2	+	2613	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	56.7243004232172	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201201_044215/106038917/ccs	chr17	+	1452	4	NNC	ENSMUSG00000034165.17	novel	336	3	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	3	143	junction_1	1892.45349275014	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47908028	47910614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_47908103_47908344_47908505_47908927_47909065_47909533
m54284U_201201_044215/106105506/ccs	chr2	+	211	1	Intergenic	novelGene_596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGATTCAGTACTGATC	9778	False	NA	NA	False	NA	NA	NA	14084004	14084215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_14084000_14084200
m54284U_201201_044215/106170085/ccs	chr7	-	2787	10	NNC	ENSMUSG00000035354.10	novel	3147	11	NA	NA	-15780	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	50.8374315287903	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98681631	98535956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681491
m54284U_201201_044215/10618920/ccs	chr18	+	2189	3	NIC	ENSMUSG00000046668.10	novel	857	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	135.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACACTCCTGGCTTCTTGC	NA	False	NA	34	True	AATAAA	-25	NA	35963366	35994741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35963453_35991445_35992510_35993702
m54284U_201201_044215/106234941/ccs	chr6	-	2920	17	NNC	ENSMUSG00000015112.16	novel	3067	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	159.387107383251	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATTGCTTGCTCTTGTG	20	False	6217138	-4	True	AATAAA	-15	NA	6217118	6041218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6191263_6191318_6216995
m54284U_201201_044215/106432213/ccs	chr1	+	2544	10	NNC	ENSMUSG00000033813.16	novel	2547	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	330	junction_4	508.177450294338	388	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACATGTTTTTTGTCTTT	NA	False	NA	NA	False	AATAAA	-17	NA	4928036	4968128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959682_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
m54284U_201201_044215/106496055/ccs	chr18	-	3247	10	ISM	ENSMUSG00000024268.17	ENSMUST00000115816.3	3995	13	248912	0	-3832	0	3prime_fragment	FALSE	canonical	3	7	junction_2	9.7410927974683	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCAAAAACCT	NA	False	NA	NA	False	AATAAA	-10	NA	25638128	25610688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr18_-_25612769_25619850_25620023_25624137_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
m54284U_201201_044215/106496441/ccs	chrX	+	214	1	Intergenic	novelGene_9513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGGGGTAAAGGAATGA	4076	False	NA	NA	False	NA	NA	NA	74317323	74317537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_74317300_74317500
m54284U_201201_044215/106496561/ccs	chr15	-	1379	10	NIC	ENSMUSG00000022617.16	novel	1416	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_3	105.224627451097	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1649	False	NA	NA	False	AATAAA	-23	NA	89313633	89310569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89310865_89311013_89311096_89311526_89311603_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
m54284U_201201_044215/106498200/ccs	chr6	+	2097	16	NIC	ENSMUSG00000029802.14	novel	600	5	NA	NA	0	-60	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	43.6165106353087	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	16	True	ATTAAA	-23	NA	58572959	58669436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_58573003_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
m54284U_201201_044215/106498222/ccs	chr4	-	189	1	Intergenic	novelGene_1866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAAGTTTTGTGGCTTTG	NA	False	NA	NA	False	NA	NA	NA	52433231	52433042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_52433000_52433200
m54284U_201201_044215/106627447/ccs	chr5	+	204	1	Intergenic	novelGene_2917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGGAAGGTAAACTAGC	NA	False	NA	NA	False	NA	NA	NA	125438571	125438775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_125438600_125438800
m54284U_201201_044215/106629186/ccs	chr2	-	177	1	Intergenic	novelGene_1272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAAGGAAATAAA	NA	False	NA	NA	False	NA	NA	NA	168678409	168678232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168678200_168678400
m54284U_201201_044215/106629499/ccs	chr6	-	6569	8	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	8407	junction_1	792.626864885853	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8913	False	NA	-21	True	AATAAA	-12	NA	122719481	122704784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122716953_122717346_122717440_122719334
m54284U_201201_044215/106629541/ccs	chr4	+	3287	1	Intergenic	novelGene_2318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATGTAAATGTGCCAT	NA	False	NA	NA	False	AAGAAA	-29	NA	142902159	142905446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_142902200_142905400
m54284U_201201_044215/106823840/ccs	chr17	+	3031	4	NIC	ENSMUSG00000007038.6	novel	3619	5	NA	NA	53	-600	intron_retention	FALSE	canonical	3	122	junction_1	26.5120517668642	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTTGTGGAGTCTGTGGT	8037	False	NA	13	True	NA	NA	NA	35150342	35154297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35150524_35150891_35151085_35151541_35153482_35153580
m54284U_201201_044215/106823879/ccs	chrX	+	2180	6	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	236	junction_4	22.2656686403081	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
m54284U_201201_044215/106825718/ccs	chr2	+	1088	1	Intergenic	novelGene_720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	32434385	32435473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_32434400_32435500
m54284U_201201_044215/106825966/ccs	chr14	+	1714	6	NIC	ENSMUSG00000041765.7	novel	688	5	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	151.832275883621	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	2075	False	NA	16	True	AATAAA	-16	NA	122183790	122258446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_122183879_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
m54284U_201201_044215/10682778/ccs	chr11	+	2392	11	NIC	ENSMUSG00000057522.16	novel	2881	11	NA	NA	0	-396	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	92.4878370381749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTGTGTGGTATCTCTG	NA	False	NA	1	True	TATAAA	-13	NA	95304923	95383836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365131_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
m54284U_201201_044215/10683442/ccs	chr17	-	177	1	Intergenic	novelGene_8572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	36096586	36096409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_36096400_36096600
m54284U_201201_044215/106889747/ccs	chr4	-	3442	5	NIC	ENSMUSG00000008489.19	novel	3671	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	43.8940485715319	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGTATCTTTAAATACAT	NA	False	NA	2	True	AATAAA	-20	NA	91260271	91138999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_91141805_91152228_91152383_91169450_91169555_91196847_91197092_91260136
m54284U_201201_044215/106892003/ccs	chr16	+	2753	1	Antisense	novelGene_ENSMUSG00000014039.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAACAAAACCAGACCG	NA	False	NA	NA	False	NA	NA	NA	97619584	97622337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_+_97619600_97622300
m54284U_201201_044215/106957649/ccs	chr5	+	168	1	Intergenic	novelGene_2832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAACAAAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	118908592	118908760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_118908600_118908800
m54284U_201201_044215/107021162/ccs	chr6	+	3171	9	NNC	ENSMUSG00000038271.18	novel	2840	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_1	17.2898091371767	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGAGCCTGCTTCACCT	8227	False	NA	11	True	AATAAA	-18	NA	125122203	125138745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_125122993_125126061_125126146_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130466_125136024_125136156_125137495
m54284U_201201_044215/107022284/ccs	chr15	-	4857	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	0	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	233.478883175522	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	NA	False	NA	-2	True	AATAAA	-19	NA	88618436	88571498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585441_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
m54284U_201201_044215/107088552/ccs	chr6	-	5473	23	NNC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_4	70.235730588068	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046484	84595468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84795659_84795705_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
m54284U_201201_044215/107154221/ccs	chr6	+	4286	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	76.7226534705074	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185016	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195624_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201201_044215/107219202/ccs	chr3	-	3883	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-243	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	264.679514775583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3507	False	NA	-2	True	AATATA	-16	NA	89959822	89907842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201201_044215/107284618/ccs	chr5	+	2845	16	ISM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	8	10528	0	-2501	5prime_fragment	FALSE	canonical	3	18	junction_10	3.53396220818629	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTAGTTCATGATTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	23639446	23698705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196
m54284U_201201_044215/107348557/ccs	chr3	+	4454	22	NNC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_5	77.786643485639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243566	88269645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252766_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
m54284U_201201_044215/107349588/ccs	chr8	-	3379	9	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_8	783.710086702985	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634433	122607888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122633804
m54284U_201201_044215/107350612/ccs	chr5	+	188	1	Intergenic	novelGene_2827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTACCCAGGAGCATG	7077	False	NA	NA	False	NA	NA	NA	118059686	118059874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_118059700_118059900
m54284U_201201_044215/107413663/ccs	chr4	-	230	1	Intergenic	novelGene_2428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAAGGTGCTCCAGGGC	4472	False	NA	NA	False	NA	NA	NA	155486754	155486524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155486500_155486800
m54284U_201201_044215/107413728/ccs	chr2	-	183	1	Intergenic	novelGene_905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAGAAAGACAAGTCA	408	False	NA	NA	False	NA	NA	NA	84678435	84678252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_84678300_84678400
m54284U_201201_044215/107415818/ccs	chr4	+	4303	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	0	1246	intron_retention	FALSE	canonical	3	147	junction_6	19.4575321034183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	-1	True	NA	NA	False	AATAAA	-20	NA	31964119	32020806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
m54284U_201201_044215/10749276/ccs	chr14	-	9012	46	NNC	ENSMUSG00000025278.10	novel	9100	46	NA	NA	55	0	at_least_one_novel_splicesite	FALSE	canonical	3	255	junction_40	115.220754303303	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCCTGTCATTCTTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	14651761	14518184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547059_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
m54284U_201201_044215/10749352/ccs	chr7	-	1240	5	NNC	ENSMUSG00000002985.17	novel	817	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_4	5193.51332794092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGAGTCTCTGTGAGT	NA	False	NA	-30	True	AATAAA	-14	NA	19432963	19430196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_19431029_19431403_19431573_19432112_19432179_19432328_19432474_19432935
m54284U_201201_044215/10750111/ccs	chr7	+	1836	15	NNC	ENSMUSG00000030795.19	novel	5536	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	334.291880285014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1184	False	NA	37	True	ATTAAA	-20	NA	127566662	127581204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576386_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
m54284U_201201_044215/10750375/ccs	chr17	+	4236	9	NIC	ENSMUSG00000116564.2	novel	3220	10	NA	NA	0	-933	intron_retention	FALSE	canonical	3	388	junction_8	30.9553610058096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAATCTGTAGTTCTCT	NA	False	NA	6	True	AATAAA	-15	NA	17594833	17614228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_17594933_17597980_17598120_17598744_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
m54284U_201201_044215/107544857/ccs	chr12	+	2424	19	NIC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	262.037317104941	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336358	21364836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_21336546_21336805_21336952_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
m54284U_201201_044215/107544874/ccs	chr11	+	202	1	Intergenic	novelGene_5877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCACTTAATGGCATTAT	933	False	NA	NA	False	NA	NA	NA	59728560	59728762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59728600_59728800
m54284U_201201_044215/107610202/ccs	chr4	+	3175	10	NIC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	168.148376570248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_136039059_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
m54284U_201201_044215/107611101/ccs	chr17	+	2006	9	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	87	junction_2	86.7564839075443	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720189	15737689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_15720287_15721415_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
m54284U_201201_044215/107676213/ccs	chr1	+	2113	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	109	-1166	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	62.1285697861577	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAGTCCTTTATATATG	NA	False	NA	NA	False	NA	NA	NA	190660797	190677993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_190660956_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
m54284U_201201_044215/107741231/ccs	chr2	-	226	1	Intergenic	novelGene_632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAATCGGTTGAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	25146912	25146686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_25146700_25146900
m54284U_201201_044215/107743064/ccs	chr19	+	812	6	NNC	ENSMUSG00000041035.10	novel	687	7	NA	NA	0	234	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_3	159.454570332744	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTCTGTGTATTGCCCGC	3712	False	NA	36	True	AGTAAA	-43	NA	45549073	45566216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_45549147_45553349_45553431_45560323_45560438_45560843_45560978_45565431_45565535_45565909
m54284U_201201_044215/107743764/ccs	chr7	-	2363	9	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1616	junction_4	183.33980575696	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765080	79744593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
m54284U_201201_044215/107743947/ccs	chr16	-	179	1	Intergenic	novelGene_8201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	31881058	31880879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31880900_31881100
m54284U_201201_044215/107807845/ccs	chr15	-	4761	25	NIC	ENSMUSG00000059323.15	novel	4235	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	178	junction_20	26.216513031972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCAGCTCTCTGCG	NA	False	NA	-1	True	AATAAA	-16	NA	76524158	76510437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
m54284U_201201_044215/107807909/ccs	chr11	-	3105	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	0	85	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	90.6081382147531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174158	52143112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_52144813_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
m54284U_201201_044215/107874725/ccs	chr11	+	225	1	Intergenic	novelGene_6347	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTCAGTTTGAAGAGAAAA	4780	False	NA	NA	False	NA	NA	NA	101609623	101609848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101609600_101609800
m54284U_201201_044215/107874949/ccs	chr16	-	164	1	Intergenic	novelGene_8061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	11116459	11116295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_11116300_11116500
m54284U_201201_044215/107938100/ccs	chr15	-	176	1	Intergenic	novelGene_7720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACATTCTGAATGT	NA	False	NA	NA	False	NA	NA	NA	56589342	56589166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_56589200_56589300
m54284U_201201_044215/107938272/ccs	chrX	-	3376	9	NNC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	-3724	0	at_least_one_novel_splicesite	FALSE	canonical	3	201	junction_6	415.817192405509	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTCTGTGCCATGCCG	NA	False	NA	-22	True	AATAAA	-15	NA	23185142	23085523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23184851
m54284U_201201_044215/108005501/ccs	chr17	-	179	1	Intergenic	novelGene_8577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTGTGTATGTGTTT	9729	False	NA	NA	False	NA	NA	NA	36248135	36247956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_36248000_36248100
m54284U_201201_044215/108136368/ccs	chr7	+	187	1	Intergenic	novelGene_3918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATACTATCTACCCAACA	666	False	NA	NA	False	NA	NA	NA	80014881	80015068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_80014900_80015100
m54284U_201201_044215/108137251/ccs	chr3	-	1871	1	FSM	ENSMUSG00000070522.5	ENSMUST00000094335.5	648	1	-19	-1204	-19	1204	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGCCACCAGATTACCT	NA	False	NA	NA	False	ATTAAA	-37	NA	28819528	28817657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_28817700_28819500
m54284U_201201_044215/10816200/ccs	chr11	-	3213	4	Intergenic	novelGene_6531	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	17.326921891156	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTGACCTGATTCTTA	NA	False	NA	NA	False	NA	NA	NA	121847545	121832032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_121834966_121836089_121836151_121836329_121836457_121847453
m54284U_201201_044215/10816242/ccs	chr6	+	5042	29	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	35	junction_16	87.8358278441162	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7539	False	NA	13	True	AATAAA	-17	NA	146789984	146933523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
m54284U_201201_044215/108200123/ccs	chr2	+	4161	7	NNC	ENSMUSG00000078864.11	novel	744	6	NA	NA	0	2805	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	121.969941652305	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	177401080	177415070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_177401169_177404638_177404694_177405994_177406097_177409531_177409569_177409836_177409964_177410168_177410230_177411379
m54284U_201201_044215/108331267/ccs	chr10	+	223	1	Intergenic	novelGene_5311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGAGAAGTGGGATAG	7849	False	NA	NA	False	NA	NA	NA	59548702	59548925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_59548700_59548900
m54284U_201201_044215/108397164/ccs	chr5	-	176	1	Intergenic	novelGene_2623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAATTGTATGT	NA	False	NA	NA	False	NA	NA	NA	76206021	76205845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_76205800_76206000
m54284U_201201_044215/108397678/ccs	chr10	-	190	1	Intergenic	novelGene_5178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCTTTAAGAAATCCT	NA	False	NA	NA	False	NA	NA	NA	4439304	4439114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_4439100_4439300
m54284U_201201_044215/108464230/ccs	chrX	+	3376	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1538	junction_14	87.5299365698294	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201201_044215/108464331/ccs	chr6	+	4226	15	NIC	ENSMUSG00000030213.13	novel	3018	9	NA	NA	0	-1255	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	51.1530815797254	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCTTCCCTGAACAAT	8850	False	NA	6	True	AATAAA	-14	NA	136509924	136584062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_136510052_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
m54284U_201201_044215/108464901/ccs	chr10	+	3086	11	NNC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	437.697441162271	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTAGTATACAGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	82465692	82486158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82479120_82479180_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
m54284U_201201_044215/108529134/ccs	chr11	+	5488	27	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	100.259640744071	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540320	74561673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74540521_74540915_74541005_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
m54284U_201201_044215/108593573/ccs	chr10	-	471	3	NNC	ENSMUSG00000111149.2	novel	378	3	NA	NA	0	693	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	27.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCTCGGTCTCTTTCT	NA	False	NA	-1	True	NA	NA	NA	34109527	34106209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_34106388_34106902_34107071_34109402
m54284U_201201_044215/108594586/ccs	chr9	-	1100	5	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1481	0	1481	0	3prime_fragment	FALSE	canonical	3	59	junction_4	28.1646942110153	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789542	20785103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344
m54284U_201201_044215/108594793/ccs	chr8	-	3078	3	NIC	ENSMUSG00000031983.8	novel	3307	4	NA	NA	178	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	130	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGATCTGTTTCATTTTC	NA	False	NA	-3	True	AATAAA	-19	NA	125389930	125362494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_125364704_125365829_125366355_125389586
m54284U_201201_044215/108595315/ccs	chr9	+	2059	12	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	0	intron_retention	TRUE	canonical	3	1280	junction_11	425.701404684567	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGACAACTGATCTTT	1179	False	NA	21	True	AATAAA	-14	NA	108437668	108442768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108437831_108438232_108438282_108438795_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
m54284U_201201_044215/108659052/ccs	chr13	+	183	1	Intergenic	novelGene_7198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTTACAATAAAGATTT	6711	False	NA	NA	False	NA	NA	NA	69809108	69809291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_69809100_69809300
m54284U_201201_044215/108659253/ccs	chr14	-	3176	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	78.4808893935332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9813	False	NA	-4	True	AATAAA	-13	NA	103336990	103318469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336791
m54284U_201201_044215/108660109/ccs	chrX	+	3998	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3075	junction_4	308.936527101892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487098_100487882_100487968_100488293_100488941_100489724_100489835_100491199
m54284U_201201_044215/108660199/ccs	chr9	-	1923	1	Intergenic	novelGene_4873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCTATGAAATTAGAAA	6478	False	NA	NA	False	NA	NA	NA	64731245	64729322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_64729300_64731200
m54284U_201201_044215/108660584/ccs	chr9	-	2534	8	NIC	ENSMUSG00000032366.16	novel	887	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	256	junction_1	130.784134343269	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTCTTTTACTCCTTA	NA	False	NA	-8	True	AATAAA	-21	NA	66951084	66935247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66950859
m54284U_201201_044215/108790033/ccs	chr15	+	188	1	Intergenic	novelGene_7642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGCAGCTTGGCATATA	1553	False	NA	NA	False	NA	NA	NA	12147833	12148021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_12147800_12148000
m54284U_201201_044215/108790068/ccs	chr2	-	1805	1	NIC	ENSMUSG00000075467.5	novel	2766	2	NA	NA	0	-2175	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCACCGGGCCTGGGCTCC	NA	False	NA	-24	True	AGTAAA	-15	NA	26242112	26240307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26240300_26242100
m54284U_201201_044215/108790098/ccs	chr2	+	3490	6	NIC	ENSMUSG00000027651.17	novel	4504	7	NA	NA	0	-887	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.3452370108182	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870416	157919240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_157870966_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
m54284U_201201_044215/108792310/ccs	chrX	-	4057	7	NIC	ENSMUSG00000035725.14	novel	4146	9	NA	NA	0	433	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	19.7800404448525	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATCTGTTTCAGGTCG	NA	False	NA	NA	False	AATAAA	-15	NA	76839578	76804583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76825643_76825908_76829733_76829903_76839153
m54284U_201201_044215/10879443/ccs	chr2	-	2083	5	NIC	ENSMUSG00000038932.14	novel	2225	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	37.9242666376029	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCCCAGTGAGTCGCTTT	5369	False	NA	NA	False	AATAAA	-19	NA	180284501	180263748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_180264508_180280196_180280441_180282093_180282257_180282673_180282858_180283768
m54284U_201201_044215/10879982/ccs	chr10	-	3439	11	NIC	ENSMUSG00000062075.14	novel	3370	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_7	23.5501592351305	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3111	False	NA	-1	True	AATAAA	-17	NA	80754079	80737197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
m54284U_201201_044215/10881728/ccs	chr13	-	214	1	ISM	ENSMUSG00000021477.10	ENSMUST00000222517.2	6168	9	8843	2497	5008	1380	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAAAGTTCAGTGACTTC	NA	False	NA	NA	False	NA	NA	NA	64509861	64509647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_64509600_64509900
m54284U_201201_044215/108858131/ccs	chr13	+	4117	3	NIC	ENSMUSG00000035840.8	novel	4250	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	29.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGTTGTTGAATATAAT	418	False	NA	27	True	AATAAA	-29	NA	81805910	81820990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_81806056_81813127_81813389_81817279
m54284U_201201_044215/108922825/ccs	chr5	+	6896	4	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	-5142	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	390.478623685799	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	618	False	NA	14	True	AATAAA	-14	NA	77408195	77434279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77408386_77415778_77416671_77423080_77423165_77428549
m54284U_201201_044215/108923660/ccs	chr3	-	4890	5	NIC	ENSMUSG00000027752.16	novel	2316	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1645	junction_4	250.749376868618	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642467	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_54636315_54636614_54641153_54641523_54641588_54641716_54641754_54642428
m54284U_201201_044215/108986725/ccs	chr14	-	5367	22	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_11	32.5658586159231	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256086	26134329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
m54284U_201201_044215/108987080/ccs	chr12	+	3393	8	NNC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	-600	intron_retention	FALSE	canonical	3	18	junction_3	71.3030325370499	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120040	113129068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_113120192_113120294_113120374_113120780_113120984_113121149_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
m54284U_201201_044215/109051960/ccs	chr12	+	2027	12	NNC	ENSMUSG00000011179.9	novel	2208	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	102	junction_2	469.236341092261	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGGAATGTTTGCAAG	NA	False	NA	NA	False	AATAAA	-20	NA	17594972	17601085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_17595170_17597096_17597195_17597286_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
m54284U_201201_044215/109051995/ccs	chr5	+	1952	15	Fusion	ENSMUSG00000015804.15_ENSMUSG00000039682.13	novel	2267	13	NA	NA	0	0	multi-exon	FALSE	canonical	3	45	junction_12	689.258030532152	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTTGTTGTTGTTTGTA	NA	False	NA	22	True	AGTAAA	-11	NA	45650845	45682940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45679777_45679845_45680763_45680877_45682494
m54284U_201201_044215/109052664/ccs	chr5	-	1351	12	ISM	ENSMUSG00000028944.15	ENSMUST00000076306.12	2838	14	87301	840	0	188	3prime_fragment	FALSE	canonical	3	39	junction_11	38.9905688956947	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTACTACTTTTCATTTCA	NA	False	NA	-4	True	ATTAAA	-19	NA	25113450	25068585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320
m54284U_201201_044215/109118601/ccs	chr12	-	1493	10	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1825	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_8	78.692086288549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9497	False	NA	-3	True	AATATA	-18	NA	110805536	110774231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110800559_110800675_110805381
m54284U_201201_044215/109120066/ccs	chrX	-	2751	8	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	102.324214621756	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539797	12521117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12532471_12532634_12535765_12535886_12539264_12539400_12539564
m54284U_201201_044215/109120158/ccs	chr1	+	5195	6	NIC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	53.9874059387928	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155916635	155944607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_155916749_155916820_155916881_155935156_155935334_155937333_155937916_155939338_155939441_155940446
m54284U_201201_044215/109184696/ccs	chr16	-	2341	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	20.4717691793683	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8191	False	NA	-5	True	AATAAA	-13	NA	4782069	4759299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4759662_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
m54284U_201201_044215/109184896/ccs	chr12	+	4422	22	NNC	ENSMUSG00000021111.16	novel	1508	12	NA	NA	168	0	intron_retention	FALSE	canonical	2	5	junction_1	449.032853365275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105751298	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_105751425_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
m54284U_201201_044215/109314069/ccs	chrX	+	2346	5	NIC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.5181111881864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618711	133622659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620375_133620475_133620782
m54284U_201201_044215/109314428/ccs	chr8	-	6445	22	NIC	ENSMUSG00000031563.9	novel	8678	23	NA	NA	0	-2123	combination_of_known_splicesites	TRUE	canonical	0	0	junction_21	51.5776059264733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATGTTGCTTATTCAG	NA	False	NA	0	True	AATACA	-18	NA	48443586	48279116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48443100
m54284U_201201_044215/109380274/ccs	chr11	+	4571	10	ISM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	0	-1665	0	1665	intron_retention	FALSE	canonical	3	12	junction_2	3.01027048536535	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGCTTCACTCTTCAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	80044930	80071449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871
m54284U_201201_044215/109446412/ccs	chr15	+	3161	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	59.3076396586785	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775634	57833463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
m54284U_201201_044215/109446711/ccs	chr2	-	2511	8	NIC	ENSMUSG00000027361.16	novel	4153	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	136.879210866176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCATGCAGACTCATGT	NA	False	NA	-10	True	ATTAAA	-14	NA	126517512	126470832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126495474_126495643_126500389_126500498_126517275
m54284U_201201_044215/10945761/ccs	chr11	+	1193	6	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	271.902188295718	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697621_96698628
m54284U_201201_044215/109512036/ccs	chr6	+	1366	12	NNC	ENSMUSG00000068328.11	novel	1769	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	317.12207936872	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5421	False	NA	9	True	ATTAAA	-19	NA	83031709	83034663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_83031814_83031891_83032030_83032109_83032192_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
m54284U_201201_044215/109512119/ccs	chr5	-	3616	3	NIC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	115.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	False	NA	0	True	AATAAA	-31	NA	108280486	108269492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_108272626_108277883_108277982_108280101
m54284U_201201_044215/109513200/ccs	chr9	-	180	1	Intergenic	novelGene_4671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGACACAAAATTGGAA	3726	False	NA	NA	False	NA	NA	NA	22182533	22182353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_22182400_22182500
m54284U_201201_044215/109576648/ccs	chr18	-	3807	16	NIC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	0	-225	intron_retention	FALSE	canonical	3	5978	junction_5	271.883667933344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	199	False	NA	-17	True	AATAAA	-13	NA	35087410	35070691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
m54284U_201201_044215/109577477/ccs	chr7	-	3616	24	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	137	junction_14	303.426562184232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	7242	False	NA	-7	True	NA	NA	NA	126101272	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
m54284U_201201_044215/109577705/ccs	chr1	+	4206	13	NIC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	281	junction_8	36.9996246227205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405104	132433397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
m54284U_201201_044215/109578933/ccs	chr16	+	2845	25	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	361.689006606504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	NA	False	NA	11	True	AATAAA	-16	NA	48251662	48451263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_48251766_48257637_48257692_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
m54284U_201201_044215/109707523/ccs	chr6	-	4458	16	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	72	0	intron_retention	FALSE	canonical	3	610	junction_7	72.9438139940598	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8216	False	NA	-28	True	AATAAA	-15	NA	115653524	115595557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
m54284U_201201_044215/109707637/ccs	chr2	+	2408	7	NIC	ENSMUSG00000026856.15	novel	2294	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	306	junction_4	23.4354906546081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCATACATTACTT	NA	False	NA	8	True	AATAAA	-15	NA	30282427	30290540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287570_30289153
m54284U_201201_044215/109707692/ccs	chr4	-	4218	17	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_16	112.020575676971	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCATTTGTTGGGGC	8387	False	NA	1	True	ATTAAA	-22	NA	133080792	133019769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096_133080261_133080600
m54284U_201201_044215/109772975/ccs	chr4	+	1525	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_12	47.0592858943789	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696417	115736447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115736141
m54284U_201201_044215/109773148/ccs	chr7	-	2856	5	NNC	ENSMUSG00000050855.17	novel	2764	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	9.83298021964857	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTGACTTTGTGGTG	3423	False	NA	-4	True	AATAAA	-21	NA	29553094	29543360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552850
m54284U_201201_044215/109773544/ccs	chr1	+	1891	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	116	junction_13	497.65060278169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724129	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748235_59749712_59749812_59750429
m54284U_201201_044215/109775461/ccs	chr7	-	3430	15	NIC	ENSMUSG00000025507.14	novel	3357	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_12	13.4416729400983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTTTGCAGAGATC	NA	False	NA	-5	True	NA	NA	NA	141023938	141018029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
m54284U_201201_044215/109775673/ccs	chr3	+	2530	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	329	junction_1	62.0118716232805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	7072	False	NA	16	True	AATAAA	-24	NA	108291194	108295495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
m54284U_201201_044215/109840536/ccs	chr2	-	3058	23	NIC	ENSMUSG00000027422.16	novel	5177	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_22	85.5170105353847	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTTCTGTCTGATCTT	9758	False	NA	-1	True	ATTAAA	-20	NA	143853183	143789314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143852918
m54284U_201201_044215/109840745/ccs	chr2	-	207	1	Intergenic	novelGene_688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGCTGACTTTAAACT	7236	False	NA	NA	False	NA	NA	NA	30821033	30820826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_30820800_30821000
m54284U_201201_044215/109969767/ccs	chr6	-	1817	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_6	2583.32646988336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	16	True	NA	-9	True	AATAAA	-17	NA	7693198	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
m54284U_201201_044215/109970666/ccs	chr5	+	2416	9	NIC	ENSMUSG00000029131.15	novel	2918	10	NA	NA	0	-104	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	736.838591127663	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGCTCTCTTGTGGTC	4601	False	NA	3	True	AATAAA	-16	NA	29940992	29991372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_29941115_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
m54284U_201201_044215/109971237/ccs	chr10	+	2919	6	NNC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_5	639.254753599846	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395409	41407044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404670
m54284U_201201_044215/109971584/ccs	chr10	+	3885	25	NNC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	73.9024789089574	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079701	63153657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099809_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
m54284U_201201_044215/109971679/ccs	chr3	+	3165	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_4	451.412707063908	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6111	False	NA	NA	False	AATAAA	-26	NA	88461070	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
m54284U_201201_044215/109972067/ccs	chr10	-	3661	16	NIC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	0	-588	intron_retention	FALSE	canonical	3	391	junction_15	43.9676648863179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGTTTTCAGTTA	NA	False	NA	-3	True	ATTAAA	-13	NA	115087372	115034364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
m54284U_201201_044215/110035509/ccs	chr17	-	175	1	Intergenic	novelGene_8637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACCATAAAACTTACTC	9019	False	NA	NA	False	NA	NA	NA	48137289	48137114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_48137100_48137300
m54284U_201201_044215/11012059/ccs	chrX	+	2453	5	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	236	junction_3	24.5662369930765	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100839695_100840283_100840444_100840965_100841368_100841707_100841990_100842072
m54284U_201201_044215/11012832/ccs	chr4	-	2043	8	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_7	40.0209129004794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	2031	False	NA	0	True	TTTAAA	-42	NA	116664745	116661198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116664002_116664664
m54284U_201201_044215/110234050/ccs	chr6	+	1148	6	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	0	-251	intron_retention	FALSE	canonical	0	0	junction_3	431.365552634885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTAAGAAGTTAGAGCA	1362	False	NA	32	True	ATTAAA	-19	NA	124807197	124810244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124807237_124807326_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
m54284U_201201_044215/110297194/ccs	chr11	+	2989	17	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	862	junction_14	82.9351921306631	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455259	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
m54284U_201201_044215/110298304/ccs	chr9	+	6899	4	NIC	ENSMUSG00000034584.4	novel	2315	3	NA	NA	123	1283	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	2.05480466765633	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTCTGTAATTGCAT	NA	False	NA	NA	False	NA	NA	NA	53252611	53290097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_53252771_53264453_53264503_53278376_53278513_53283542
m54284U_201201_044215/110299578/ccs	chr4	-	3078	26	NIC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_24	92.9993892453063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGTACAATTTAGTGG	-1	True	NA	-15	True	ATTAAA	-19	NA	11254258	11204383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11252775_11252951_11253980
m54284U_201201_044215/110362659/ccs	chr6	+	178	1	Intergenic	novelGene_3316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGGACAAACAA	1860	False	NA	NA	False	NA	NA	NA	70967789	70967967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_70967800_70968000
m54284U_201201_044215/110364426/ccs	chr9	-	3968	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	243.725439467754	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526585	108480145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108526427
m54284U_201201_044215/110428290/ccs	chr12	-	186	1	Intergenic	novelGene_6785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAGGAGAGTACTGAC	NA	False	NA	NA	False	NA	NA	NA	83649897	83649711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_83649700_83649900
m54284U_201201_044215/110429282/ccs	chrX	+	1196	4	NIC	ENSMUSG00000002014.13	novel	800	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1181	junction_1	199.50995519578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5432	False	NA	48	True	AATAAA	-30	NA	72830633	72834432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72830913_72832440_72832560_72833405_72834031_72834259
m54284U_201201_044215/110494252/ccs	chrX	+	4497	17	NIC	ENSMUSG00000045103.20	novel	4438	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	247	junction_13	44.1996535619907	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAAATACCTATTGGT	NA	False	NA	10	True	AATAAA	-16	NA	84091927	84248645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_84092066_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
m54284U_201201_044215/110562000/ccs	chrX	+	2301	7	NIC	ENSMUSG00000073125.11	novel	2384	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_5	541.181936957331	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235816	72246536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72245455_72245552_72245645
m54284U_201201_044215/110624985/ccs	chr10	-	2670	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	0	225	intron_retention	FALSE	canonical	3	644	junction_8	53.2417834036389	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214297	81202706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
m54284U_201201_044215/110625468/ccs	chr10	+	4784	2	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	-6892	-416	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTCTGTCTTTTTT	7990	False	NA	13	True	AATAAA	-15	NA	75861591	75878652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_75861791_75874067
m54284U_201201_044215/110626066/ccs	chr9	-	192	1	Intergenic	novelGene_4818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	222	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTATACAATGTTGGAT	NA	False	NA	NA	False	NA	NA	NA	58535754	58535562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58535600_58535800
m54284U_201201_044215/110690404/ccs	chr11	+	3681	26	NIC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	36.3988131674647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3496	False	NA	14	True	AATAAA	-22	NA	85244010	85716884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_85244060_85245419_85245506_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85712847_85712939_85716027
m54284U_201201_044215/110691596/ccs	chr9	-	2861	14	NIC	ENSMUSG00000032405.11	novel	5564	14	NA	NA	0	-1590	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	23.8180976391468	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGAAATAGTTATGT	NA	False	NA	-8	True	AATAAA	-22	NA	62888165	62787358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_62788546_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
m54284U_201201_044215/110691863/ccs	chr3	+	704	4	NNC	ENSMUSG00000087260.6	novel	881	4	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	550.836333829448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGTTCATTTCTGG	3208	False	NA	9	True	AATAAA	-13	NA	107186371	107191395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_107186430_107187185_107187248_107189203_107189343_107190950
m54284U_201201_044215/110693088/ccs	chr5	+	1102	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	0	-1161	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_1	5645.42574912547	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGTGAATCATCCCT	475	False	NA	NA	False	AATAAA	-19	NA	129097265	129100226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_129097343_129097572_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
m54284U_201201_044215/110755889/ccs	chr19	+	189	1	Intergenic	novelGene_9208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGATTGTGATG	NA	False	NA	NA	False	NA	NA	NA	30155998	30156187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_30156000_30156200
m54284U_201201_044215/110757915/ccs	chr13	-	2285	16	NIC	ENSMUSG00000021149.9	novel	2442	16	NA	NA	0	-145	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	195.391982094114	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATGACTTACATTTTG	NA	False	NA	-14	True	AGTAAA	-18	NA	9046086	9022660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9045984
m54284U_201201_044215/11077581/ccs	chr2	+	2966	22	NIC	ENSMUSG00000026785.15	novel	3460	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_7	19.7860437769826	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTGTGTAGTGTCTAG	1377	False	NA	24	True	AATAAA	-26	NA	29967754	29981034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29967812_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
m54284U_201201_044215/110821490/ccs	chr8	-	1759	10	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	0	-319	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	135.177889199362	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860655	91850515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91860527
m54284U_201201_044215/110821917/ccs	chr19	+	2227	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	23.4795655837156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4312	False	NA	18	True	ATTAAA	-19	NA	5074141	5081997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
m54284U_201201_044215/110824181/ccs	chr9	+	2523	1	Genic_Genomic	ENSMUSG00000063382.7	novel	NA	NA	NA	NA	10107	5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCTCTTGCATTTTTA	1344	False	NA	9	True	ATTAAA	-18	NA	44420675	44423198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_44420700_44423200
m54284U_201201_044215/110888924/ccs	chr9	-	4571	16	NIC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	71	junction_15	81.6292431260595	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100614	111057322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097372_111100476
m54284U_201201_044215/110952877/ccs	chr1	+	186	1	Antisense	novelGene_ENSMUSG00000102760.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTTTATATGCTATG	NA	False	NA	NA	False	NA	NA	NA	181834973	181835159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_181835000_181835200
m54284U_201201_044215/111018190/ccs	chr16	+	1610	3	NNC	ENSMUSG00000116469.2	novel	673	3	NA	NA	53115	928	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	3.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCTCTCCCTAGTC	6224	False	NA	5	True	AATAAA	-15	NA	8951123	8956236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_8951217_8953545_8953645_8954818
m54284U_201201_044215/111019126/ccs	chr5	+	3934	19	NIC	ENSMUSG00000029098.18	novel	3976	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	12.8490764427681	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGCTTTCTCCCCTGTG	NA	False	NA	24	True	AATAAA	-15	NA	35740421	35771145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_35740479_35741219_35741316_35745502_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765777_35766363_35766432_35767079_35767167_35769358
m54284U_201201_044215/111020566/ccs	chr16	+	163	1	Intergenic	novelGene_8273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACTAACGTATCCTAAA	NA	False	NA	NA	False	NA	NA	NA	48260922	48261085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_48260900_48261100
m54284U_201201_044215/111084273/ccs	chrX	-	3020	20	NNC	ENSMUSG00000057000.13	novel	2978	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_19	14.4216288782296	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGTTTATATGTATG	NA	False	NA	NA	False	AATAAA	-25	NA	134986004	134972847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979810_134979920_134979999_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
m54284U_201201_044215/111085707/ccs	chr12	-	2776	9	NIC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	83.2807750924546	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2423	False	NA	-1	True	AATAAA	-20	NA	102671173	102534840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102641701_102641727_102670980
m54284U_201201_044215/111149823/ccs	chr8	-	3100	5	NIC	ENSMUSG00000034189.6	novel	3141	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	55.8496866598193	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCGCCACCAGAGGGT	NA	False	NA	-10	True	AATAAA	-19	NA	120301922	120288727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294690_120301830
m54284U_201201_044215/111151097/ccs	chrX	-	2348	9	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1120	junction_6	124.053415914275	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
m54284U_201201_044215/111215652/ccs	chr9	-	2793	15	NIC	ENSMUSG00000042790.17	novel	3964	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.9340386434508	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATCAGGTTCCATTT	9606	False	NA	NA	False	AGTAAA	-18	NA	45817689	45775596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
m54284U_201201_044215/111215893/ccs	chr4	+	4291	5	ISM	ENSMUSG00000028977.18	ENSMUST00000122222.8	7926	21	141413	0	-1160	0	3prime_fragment	FALSE	canonical	2	3	junction_3	1.87082869338697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACGTTATCTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	149030298	149039346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_149030679_149031446_149031619_149032980_149033133_149033249_149033392_149035901
m54284U_201201_044215/111215953/ccs	chrX	-	1287	12	NNC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_4	566.604457774776	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974423	72965726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971446_72971543_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
m54284U_201201_044215/111280155/ccs	chr10	-	200	1	Intergenic	novelGene_5231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTTAAAACATTGTGGCA	9729	False	NA	NA	False	AAAACA	-4	NA	24914542	24914342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_24914300_24914500
m54284U_201201_044215/111280247/ccs	chr11	-	2586	17	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_16	54.30350903717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3582	False	NA	-5	True	CATAAA	-18	NA	54846948	54801612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54846846
m54284U_201201_044215/111280741/ccs	chr6	+	221	1	Intergenic	novelGene_3177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAGATTCATAGAAACT	NA	False	NA	NA	False	TTTAAA	-3	NA	36421842	36422063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_36421800_36422100
m54284U_201201_044215/111282162/ccs	chr8	-	1684	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	64.4388363982749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578640	106571304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576464_106576556_106578502
m54284U_201201_044215/111282667/ccs	chr11	+	5116	22	NNC	ENSMUSG00000020532.19	novel	9513	56	NA	NA	26304	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_17	56.7144656348352	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	1981	False	NA	12	True	AATAAA	-20	NA	84197584	84292477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_84197739_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
m54284U_201201_044215/111346480/ccs	chr17	-	1655	6	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	0	355	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	1387.58774857664	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTCGATAGCTTGTTT	2963	False	NA	-17	True	AATAAA	-14	NA	65920550	65887059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_65887843_65889574_65889773_65899285_65899367_65900434_65900539_65901896_65902050_65920214
m54284U_201201_044215/111348154/ccs	chr17	+	2703	18	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	149.65172948686	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980366	57018764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56980412_56993005_56993062_56998744_56998883_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
m54284U_201201_044215/111411946/ccs	chr3	-	596	1	FSM	ENSMUSG00000070343.4	ENSMUST00000084614.5	537	1	-12	-47	-12	47	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTAAAGAAGTGCTAGG	NA	False	NA	NA	False	AATAAA	-25	NA	146545114	146544518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_146544500_146545100
m54284U_201201_044215/11141363/ccs	chr8	+	2577	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	0	0	intron_retention	TRUE	canonical	3	109	junction_18	72.710434300971	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717245	85729978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727952_85728054_85729132_85729244_85729315_85729388_85729493
m54284U_201201_044215/1114186/ccs	chr17	-	841	7	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	95	junction_5	2338.47820886433	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877729	31866055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31873952_31874041_31877626
m54284U_201201_044215/1114750/ccs	chr2	-	5028	17	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_16	64.3316298079724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481109	84431126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
m54284U_201201_044215/111477345/ccs	chr9	+	3362	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	252.557003466544	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1147	False	NA	64	True	NA	NA	NA	108394285	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_108394440_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201201_044215/111477845/ccs	chr17	-	3308	6	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1956	junction_1	145.974792344432	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80509597_80509634_80510119_80511662_80511741_80512868_80513276_80513458_80514603
m54284U_201201_044215/111478272/ccs	chr14	-	5419	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_12	54.2318256108985	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATGTTTGAGTTGTAC	NA	False	NA	-5	True	AATAAA	-17	NA	26256086	26134328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26180564_26180616_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
m54284U_201201_044215/111478321/ccs	chr11	-	2089	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	27	junction_12	280.186856501537	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687229	120680026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685805_120686302_120686550_120686764
m54284U_201201_044215/111478618/ccs	chr11	-	3624	11	NNC	ENSMUSG00000020863.16	novel	3478	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_5	100.65689246147	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGATTGTCTGTGTCAT	NA	False	NA	-5	True	AATAAA	-23	NA	94212814	94181964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94189775_94189922_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
m54284U_201201_044215/1114945/ccs	chr5	+	3363	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_11	24.9767793394753	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578303	129648448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620360_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
m54284U_201201_044215/111542431/ccs	chr18	+	2191	15	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	54.3467701760779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151851	75420035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
m54284U_201201_044215/111674982/ccs	chr5	-	10904	53	NIC	ENSMUSG00000029505.18	novel	10608	52	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_41	25.0433942913722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTGTTCTGTCTTAA	NA	False	NA	-5	True	AATAAA	-14	NA	110918451	110812243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110848387_110848631_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
m54284U_201201_044215/111804911/ccs	chr2	-	2780	4	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	70	0	intron_retention	FALSE	canonical	3	17	junction_3	8.52447456836295	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCATTCTTGACTTT	NA	False	NA	-6	True	AATAAA	-44	NA	166349921	166341960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166349807
m54284U_201201_044215/111805743/ccs	chr1	-	3015	18	NIC	ENSMUSG00000026198.16	novel	2966	19	NA	NA	0	0	intron_retention	TRUE	canonical	3	123	junction_17	15.8487662296931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTGTGGTTTGGTTGTG	NA	False	NA	-2	True	AATAAA	-15	NA	75156930	75148360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154747_75155574_75155713_75156213
m54284U_201201_044215/111870134/ccs	chr9	-	1958	12	NIC	ENSMUSG00000032534.19	novel	4180	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	34.0354700737407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCACATGAATGTTTATTA	NA	False	NA	-10	True	AATAAA	-17	NA	102503733	102463885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102492473_102492570_102496009_102496188_102496890_102496960_102503461
m54284U_201201_044215/111871149/ccs	chr19	+	1525	10	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1028	junction_5	75.4630152237947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATCCTGGACCTTTT	963	False	NA	21	True	AATAAA	-14	NA	8713190	8717981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8717329_8717459_8717517_8717765
m54284U_201201_044215/111871328/ccs	chrX	+	6468	5	Fusion	ENSMUSG00000099072.3_ENSMUSG00000043929.17	novel	1227	5	NA	NA	0	0	multi-exon	FALSE	canonical	3	16	junction_4	17.9652442232217	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTCTTTAACTGATTAT	NA	False	NA	NA	False	AATAAA	-20	NA	93278595	93321330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chrX_+_93278732_93278826_93279027_93285550_93285602_93296020_93296733_93315961
m54284U_201201_044215/111872269/ccs	chr6	+	6320	42	NIC	ENSMUSG00000038759.16	novel	6412	43	NA	NA	0	0	intron_retention	FALSE	canonical	2	193	junction_5	62.8466117556167	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAATGTGTGGTCATTC	NA	False	NA	NA	False	AATAAA	-16	NA	35154550	35224531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
m54284U_201201_044215/111936570/ccs	chr1	+	5778	7	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	79.0831138036995	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155911471	155944607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_155911838_155916820_155916881_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
m54284U_201201_044215/111938357/ccs	chr5	+	191	1	Intergenic	novelGene_2580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTGAGACATGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	63770974	63771165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_63771000_63771200
m54284U_201201_044215/112001536/ccs	chr19	+	2414	10	NNC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	90.951078967938	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043484	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_38043530_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/112001605/ccs	chr11	+	2509	9	NNC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	12	junction_8	42.8689864587443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992513	103003026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_102992615_102993507_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002364
m54284U_201201_044215/112003285/ccs	chr4	+	2765	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_5	54.8475158963467	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
m54284U_201201_044215/112003453/ccs	chr3	-	3998	15	NIC	ENSMUSG00000039735.17	novel	5357	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	12.9545910229319	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	False	NA	-5	True	AATAAA	-18	NA	122413364	122332373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342915_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
m54284U_201201_044215/112066978/ccs	chr5	-	6612	8	NIC	ENSMUSG00000029190.20	novel	6677	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	24.0882730381234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTGTTTTTATTTAT	NA	False	NA	45	True	AATAAA	-13	NA	36853314	36757828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_36760148_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
m54284U_201201_044215/112068114/ccs	chr12	-	191	1	Intergenic	novelGene_6817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCCTGAGCTAATCCAT	NA	False	NA	NA	False	NA	NA	NA	85831503	85831312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85831300_85831500
m54284U_201201_044215/112068692/ccs	chr16	-	154	1	Intergenic	novelGene_8147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAATAAATAAACTTCCA	4968	False	NA	NA	False	NA	NA	NA	20729561	20729407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20729400_20729600
m54284U_201201_044215/11209509/ccs	chr2	+	2114	6	NNC	ENSMUSG00000006418.18	novel	1985	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	238.000336134216	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	False	NA	15	True	AATAAA	-16	NA	167345365	167358084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_167345522_167348988_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
m54284U_201201_044215/112133069/ccs	chr2	+	200	1	Intergenic	novelGene_1114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAGGAAGAGTTAGACT	NA	False	NA	NA	False	NA	NA	NA	151856970	151857170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_151857000_151857200
m54284U_201201_044215/112134520/ccs	chr18	+	5807	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	35.3647658929996	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGGATCTCTTTTT	NA	False	NA	22	True	GATAAA	-24	NA	24087748	24097730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24088241_24089395_24089911_24090111_24090254_24093072
m54284U_201201_044215/112198875/ccs	chr11	-	1840	14	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	-62	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	280.168482699651	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACCCTCTGGAATGT	4489	False	NA	-23	True	AATAAA	-18	NA	6217772	6208980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216918_6217417_6217580_6217659
m54284U_201201_044215/112199505/ccs	chr12	-	3142	8	NIC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_4	181.049998731887	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771647	69737206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69759395_69759528_69768085_69768238_69768851_69768968_69771427
m54284U_201201_044215/112199619/ccs	chr18	+	2922	22	NIC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	266.031795279762	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-12	True	NA	72	True	ATTAAA	-28	NA	3383231	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3416467_3416554_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
m54284U_201201_044215/112264647/ccs	chr3	+	4154	24	NNC	ENSMUSG00000025437.16	novel	821	6	NA	NA	-6458	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	110.248576327455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152045656	152098970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_152046063_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
m54284U_201201_044215/112265929/ccs	chr9	+	2595	12	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	168	0	intron_retention	FALSE	canonical	3	1100	junction_8	78.2026399334574	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446990	59472392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59470334_59470506_59470598_59471165_59471271_59472103
m54284U_201201_044215/112331555/ccs	chr11	+	178	1	Intergenic	novelGene_5884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAGGCAGAGG	4092	False	NA	NA	False	NA	NA	NA	60458714	60458892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_60458700_60458900
m54284U_201201_044215/112396800/ccs	chr10	-	187	1	Intergenic	novelGene_5422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACACTTAGGGAAGAATG	NA	False	NA	NA	False	NA	NA	NA	76239233	76239046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_76239000_76239200
m54284U_201201_044215/112396919/ccs	chr14	+	2830	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	1681.58701496202	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGCCTTCTTGACCC	NA	False	NA	22	True	AATAAA	-18	NA	99536126	99552472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_99536137_99538816_99539691_99540853_99540914_99550586
m54284U_201201_044215/112460106/ccs	chr6	+	2304	19	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	36	junction_17	69.6486996147429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	173	False	NA	NA	False	AATAAA	-22	NA	49372537	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
m54284U_201201_044215/112462605/ccs	chr15	-	202	1	Intergenic	novelGene_7948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGAATGACTCTTGGCT	NA	False	NA	NA	False	NA	NA	NA	98788401	98788199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98788200_98788400
m54284U_201201_044215/112591618/ccs	chr18	+	3204	19	NNC	ENSMUSG00000041238.17	novel	3209	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_8	47.134428192009	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3245	False	NA	9	True	ATTAAA	-31	NA	11790439	11875935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851940_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
m54284U_201201_044215/112592690/ccs	chr16	+	5486	33	NNC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_20	346.449794286182	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201201_044215/112593682/ccs	chr2	-	199	1	Intergenic	novelGene_1332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGTTCCTCTATTGA	NA	False	NA	NA	False	TATAAA	-7	NA	181267527	181267328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181267300_181267500
m54284U_201201_044215/112657147/ccs	chr2	+	3573	4	NIC	ENSMUSG00000037514.19	novel	3622	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	277.441084837043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	864	False	NA	5	True	AATAAA	-19	NA	131104414	131141108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_131104736_131115830_131116041_131135318_131135445_131138192
m54284U_201201_044215/112657591/ccs	chr2	-	5714	32	NIC	ENSMUSG00000033526.17	novel	5533	30	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	48	junction_7	19.1421648876737	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGGGTGTGACTCCTTT	NA	False	NA	-5	True	AATAAA	-17	NA	121185814	121141041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_121142964_121147135_121147250_121152135_121152274_121157332_121157396_121158125_121158252_121162038_121162130_121162722_121162873_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957_121181133_121181397_121181495_121185781
m54284U_201201_044215/112658284/ccs	chr12	+	3001	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	128.051189540969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201201_044215/112722052/ccs	chr1	-	6670	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9550	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_41	294.850421348963	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	NA	False	NA	17	True	NA	NA	NA	84827787	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
m54284U_201201_044215/112722882/ccs	chr9	+	1890	12	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	110.549342036909	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	24	True	AATAAA	-15	NA	114230172	114303445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_114230338_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
m54284U_201201_044215/112723179/ccs	chr18	-	3247	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_5	57.5298835389052	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
m54284U_201201_044215/112723844/ccs	chr7	+	4338	31	NIC	ENSMUSG00000030447.16	novel	2908	24	NA	NA	-43	200	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	114.098183839865	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGTTTGTTCATTGG	NA	False	NA	11	True	AATAAA	-14	NA	55491775	55580446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_55491815_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
m54284U_201201_044215/11272443/ccs	chr18	-	4469	25	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	130	junction_13	309.116247011811	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982043	60946826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
m54284U_201201_044215/112724458/ccs	chr1	+	2321	7	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	167	junction_1	23.5772960470214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097908	171104469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171097985_171098772_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
m54284U_201201_044215/11274428/ccs	chr8	-	2049	9	NNC	ENSMUSG00000031949.18	novel	2762	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	15.189943219117	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGCATAGTCTCTGTCC	NA	False	NA	NA	False	AATAAA	-22	NA	112718934	112698184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717020_112718812
m54284U_201201_044215/11274569/ccs	chr12	+	183	1	Intergenic	novelGene_6948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTATGAGGACAGGTGC	NA	False	NA	NA	False	NA	NA	NA	119257228	119257411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_119257200_119257400
m54284U_201201_044215/112853114/ccs	chr3	-	1876	12	NNC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	991.989002871595	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352525	108333927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_108334298_108334575_108334706_108335176_108335219_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
m54284U_201201_044215/112854077/ccs	chr7	-	1085	7	NIC	ENSMUSG00000025499.19	novel	2828	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	236.49154318918	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTCTCTGGCTGGA	NA	False	NA	-6	True	AGTAAA	-14	NA	140773873	140770842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140771108_140771254_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
m54284U_201201_044215/112854523/ccs	chr6	-	2796	9	NIC	ENSMUSG00000029672.17	novel	2826	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	132.259924013285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTAGTAGTTGCAGTGAT	18	False	22356183	0	True	ATTAAA	-22	NA	22356165	22306518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339271_22339377_22343264_22343319_22355993
m54284U_201201_044215/112918837/ccs	chr8	-	1868	11	NIC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	128	-194	intron_retention	FALSE	canonical	3	204	junction_10	28.318898283655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTAGGACTGGACTAGGT	NA	False	NA	-13	True	AATAAA	-15	NA	85620418	85613215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620314_85620370
m54284U_201201_044215/112984229/ccs	chr13	-	3081	15	NIC	ENSMUSG00000021639.18	novel	1656	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	225	junction_9	30.744835305449	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGAAAGCACTTTGA	NA	False	NA	-19	True	AATAAA	-32	NA	100629087	100605315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
m54284U_201201_044215/112984822/ccs	chr12	-	4593	28	NIC	ENSMUSG00000021068.18	novel	7183	30	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_27	9.24799314603341	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTTCTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	70158751	70065512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158627
m54284U_201201_044215/112985879/ccs	chr7	-	2299	7	NIC	ENSMUSG00000030423.8	novel	2113	7	NA	NA	0	-828	intron_retention	TRUE	canonical	3	24	junction_5	91.4706996195442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATAAATGGCTTCAAAT	NA	False	NA	-13	True	AATAAA	-11	NA	37970797	37962247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37968084_37968325_37968379_37970570
m54284U_201201_044215/113049790/ccs	chr4	+	179	1	Intergenic	novelGene_1734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGACTTTAAAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	8685797	8685976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_8685800_8686000
m54284U_201201_044215/113117038/ccs	chr18	-	4253	23	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	136.764781182514	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAACTAGTATGACCC	NA	False	NA	NA	False	AATAAA	-17	NA	34757654	34731667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_34732639_34732853_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
m54284U_201201_044215/113182228/ccs	chr17	-	3358	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	431	junction_6	64.6791137470362	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	7993	False	NA	-1	True	AATAAA	-19	NA	27423443	27408573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27418413_27420610_27420652_27422632
m54284U_201201_044215/113247157/ccs	chr11	-	2444	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_6	110.81174601799	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508762	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201201_044215/113247614/ccs	chr11	+	4588	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-380	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	84.5645911006918	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCAATGGTACAGTA	NA	False	NA	33	True	AATAAA	-29	NA	21188900	21271136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
m54284U_201201_044215/113312475/ccs	chr1	-	5605	29	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	340	-111	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	65.6063068614596	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTGAATTTAAAGCAT	9174	False	NA	-33	True	ATTAAA	-19	NA	97697796	97633883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97648830_97649005_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
m54284U_201201_044215/113313576/ccs	chr15	-	1681	13	NNC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-89	406	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_11	939.498754508074	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283884	81249244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81280305_81280376_81283685
m54284U_201201_044215/113313957/ccs	chr12	+	184	1	Intergenic	novelGene_6723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCTTTAAAAATTTTACT	NA	False	NA	NA	False	NA	NA	NA	75688405	75688589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_75688400_75688600
m54284U_201201_044215/113314103/ccs	chr6	-	4039	24	NNC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_23	185.996371694595	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	3	True	NA	-2	True	TTTAAA	-5	NA	29609622	29540825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29602857_29602910_29609364
m54284U_201201_044215/113378129/ccs	chr9	+	2125	16	NIC	ENSMUSG00000070291.5	novel	2207	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	19.8422668955832	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTGTTGAAATTTTTTA	9042	False	NA	2	True	AATAAA	-13	NA	78303058	78330869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_78303409_78306322_78306379_78308130_78308258_78309631_78309764_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329121_78330733
m54284U_201201_044215/113380087/ccs	chr5	+	220	1	Intergenic	novelGene_2995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATCCCTGGCATCCAC	NA	False	NA	NA	False	NA	NA	NA	137280377	137280597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137280400_137280600
m54284U_201201_044215/11339694/ccs	chr19	+	2091	1	Intergenic	novelGene_9325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAACCTAAAAAT	6524	False	NA	NA	False	NA	NA	NA	47031785	47033876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_47031800_47033900
m54284U_201201_044215/113443416/ccs	chr2	+	166	1	Intergenic	novelGene_790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAGAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	49041631	49041797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_49041600_49041800
m54284U_201201_044215/113508566/ccs	chr8	-	4767	17	NIC	ENSMUSG00000031858.17	novel	1931	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_6	53.9156966360447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495384	70471216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
m54284U_201201_044215/113509104/ccs	chr13	-	1474	8	NIC	ENSMUSG00000021519.12	novel	1479	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	109.238178270405	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGTTTCAATATTA	377	False	NA	NA	False	AATAAA	-18	NA	67081152	67060181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065233_67070819_67071010_67076233_67076387_67077948_67078288_67080998
m54284U_201201_044215/113509409/ccs	chr11	-	3930	15	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	168.641813393031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5020	False	NA	-12	True	AATAAA	-12	NA	120042148	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996860_119997259_119997437_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201201_044215/113511192/ccs	chr6	+	1912	13	NIC	ENSMUSG00000058440.15	novel	1879	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	175.389309030574	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATGTATGGTTTGGGC	13	True	NA	2	True	AATAAA	-18	NA	30048027	30144854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
m54284U_201201_044215/113575389/ccs	chr6	-	7574	19	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	782	intron_retention	FALSE	canonical	3	90	junction_15	15.3676146570284	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825128	119548808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
m54284U_201201_044215/113576446/ccs	chr2	+	3936	13	NNC	ENSMUSG00000026803.18	novel	4160	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	20.8704669063461	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTGAAATGACTTGAA	NA	False	NA	21	True	AATAAA	-23	NA	28950277	28977668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964814_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118_28976918_28977130
m54284U_201201_044215/113640190/ccs	chr5	+	2814	13	NIC	ENSMUSG00000054099.12	novel	2784	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.6829171678492	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTTGTTTTACATTAC	NA	False	NA	NA	False	AATAAA	-19	NA	8472849	8504736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_8473040_8474796_8474888_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
m54284U_201201_044215/113640426/ccs	chr3	-	4144	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	257.541526273147	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3507	False	NA	99	True	AAAAAG	-18	NA	89959822	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201201_044215/113641172/ccs	chr9	-	1347	7	NNC	ENSMUSG00000032040.16	novel	1274	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	302.376375105963	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGTGTAGCCCAGTAG	NA	False	NA	-3	True	AATAAA	-22	NA	35087289	35035703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_35036141_35037206_35037348_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
m54284U_201201_044215/113773096/ccs	chr5	-	195	1	Intergenic	novelGene_2958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTAACTGCTCTTGCACA	NA	False	NA	NA	False	NA	NA	NA	134328805	134328610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_134328600_134328800
m54284U_201201_044215/113838331/ccs	chr18	-	4745	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	0	-147	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	26.2461849079485	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-15	True	NA	NA	False	AATAAA	-17	NA	7626859	7348110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
m54284U_201201_044215/113838806/ccs	chr6	-	4482	18	ISM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	75	1	0	0	intron_retention	FALSE	canonical	3	65	junction_10	8.75226120065937	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797660	148743990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434
m54284U_201201_044215/113903946/ccs	chr2	-	3904	12	NIC	ENSMUSG00000036327.19	novel	2559	13	NA	NA	135	0	intron_retention	FALSE	canonical	3	117	junction_2	7.1269480445526	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTCAGTTTTTTGAAA	NA	False	NA	NA	False	AATAAA	-21	NA	26127402	26099136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
m54284U_201201_044215/113903961/ccs	chr3	+	3099	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_20	93.1009504905751	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/11404519/ccs	chrX	-	218	1	Intergenic	novelGene_9671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATCAAATAAAATTAGATT	NA	False	NA	NA	False	NA	NA	NA	150610104	150609886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_150609900_150610100
m54284U_201201_044215/11405005/ccs	chr16	-	3051	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	35.9374456521328	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710048	43681769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701355_43701577_43709929
m54284U_201201_044215/11405111/ccs	chr15	-	2195	3	NIC	ENSMUSG00000075511.10	novel	4969	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_1	13	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCCAGCTTAAGTCTCT	245	False	NA	NA	False	AATAAA	-20	NA	83251483	83241734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_83243152_83249229_83249715_83251190
m54284U_201201_044215/114098450/ccs	chr6	-	1676	11	NIC	ENSMUSG00000004980.17	novel	1728	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	874	junction_10	2893.40520667258	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAATTATAGACTTTT	NA	False	NA	-14	True	AATAAA	-17	NA	51446874	51439739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
m54284U_201201_044215/114098800/ccs	chr2	+	2616	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	48.8950470250594	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201201_044215/114100586/ccs	chr4	+	5334	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	144.41451111439	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/114163832/ccs	chr7	+	3336	24	NIC	ENSMUSG00000036528.17	novel	3310	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	7.22105721461798	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGTGAAACATTTTTA	7245	False	NA	NA	False	AATAAA	-16	NA	107194413	107344092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_107194587_107236420_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
m54284U_201201_044215/114164268/ccs	chr2	-	1775	6	NIC	ENSMUSG00000018322.11	novel	1923	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	238.364930306453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGCTCTGACGCATTT	5881	False	NA	-5	True	ATTAAA	-16	NA	163913089	163895459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_163896428_163896620_163896748_163902758_163902929_163906811_163906965_163908489_163908590_163912832
m54284U_201201_044215/114164686/ccs	chr5	+	177	1	Intergenic	novelGene_2545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCTTAAAAATACACTAAGA	7342	False	NA	NA	False	NA	NA	NA	34417807	34417984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_34417800_34418000
m54284U_201201_044215/114295412/ccs	chr5	-	3672	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	296	-1969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229.180278383634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996085	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27995942
m54284U_201201_044215/114362930/ccs	chr13	+	2680	2	NIC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619208	97633515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_97619286_97630912
m54284U_201201_044215/114427961/ccs	chr11	-	3878	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	-180	-508	combination_of_known_junctions	FALSE	canonical	3	37	junction_18	97.6774106086452	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	1644	False	NA	-4	True	ATTAAA	-19	NA	60113587	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60113348
m54284U_201201_044215/114428319/ccs	chr8	-	3772	1	Antisense	novelGene_ENSMUSG00000031723.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCCCAAACGGAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	110296404	110292632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_110292600_110296400
m54284U_201201_044215/114491540/ccs	chr1	-	2318	10	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	53	junction_6	23.0656604361988	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5256	False	NA	-15	True	AGTAAA	-16	NA	171108693	171104564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171108097_171108247_171108343_171108446
m54284U_201201_044215/114494137/ccs	chr5	+	197	1	Intergenic	novelGene_2996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCGTAGATATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	137322494	137322691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137322500_137322700
m54284U_201201_044215/114557089/ccs	chr2	-	3006	1	Intergenic	novelGene_618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	20824856	20821850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_20821800_20824900
m54284U_201201_044215/114559176/ccs	chr19	-	4233	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	115.170793729986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3860	False	NA	-1	True	AATAAA	-20	NA	7319225	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
m54284U_201201_044215/114559745/ccs	chr15	+	2336	19	NNC	ENSMUSG00000033065.15	novel	2816	23	NA	NA	12576	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	22.6396898290492	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGCTCTTGTTATTATCT	NA	False	NA	11	True	AATAAA	-23	NA	98018922	98030332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_98018951_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
m54284U_201201_044215/114559758/ccs	chr10	+	177	1	Intergenic	novelGene_5239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGAAAAAGAACATAAGCT	NA	False	NA	NA	False	NA	NA	NA	27449061	27449238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_27449100_27449200
m54284U_201201_044215/114622814/ccs	chr11	+	5250	16	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	42.8555195459763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93777032	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_93777243_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
m54284U_201201_044215/114688907/ccs	chr17	-	3584	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_6	14.4501057281791	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533818	22504851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22532217_22532302_22533727
m54284U_201201_044215/11469432/ccs	chr2	-	1287	8	NIC	ENSMUSG00000026766.17	novel	1342	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_6	203.005881085012	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186729	50169892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182911_50186263_50186322_50186654
m54284U_201201_044215/11469542/ccs	chr18	+	273	1	Intergenic	novelGene_8966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTATTAGATTTAT	NA	False	NA	NA	False	AATATA	-13	NA	56807518	56807791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_56807500_56807800
m54284U_201201_044215/11470046/ccs	chr11	+	3480	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	223.899344944702	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697135	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97697374_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201201_044215/11471448/ccs	chr7	-	1460	11	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	0	-71	combination_of_known_splicesites	FALSE	canonical	3	36	junction_3	717.789133381107	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89629767	89603938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_89604272_89604738_89604813_89605462_89605622_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
m54284U_201201_044215/114754605/ccs	chr16	-	5886	30	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_20	110.769119612331	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20245104	20150052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
m54284U_201201_044215/114754870/ccs	chr6	+	190	1	Intergenic	novelGene_3387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAATACTA	NA	False	NA	NA	False	NA	NA	NA	91402832	91403022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_91402800_91403000
m54284U_201201_044215/114755391/ccs	chrX	+	232	1	Intergenic	novelGene_9548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATTACACTTTCTTATA	NA	False	NA	NA	False	NA	NA	NA	98364386	98364618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_98364400_98364600
m54284U_201201_044215/114819871/ccs	chr1	-	184	1	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTTTATGTTTTGATCC	NA	False	NA	NA	False	NA	NA	NA	4947637	4947453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_4947500_4947600
m54284U_201201_044215/114821233/ccs	chr9	-	7739	10	NNC	ENSMUSG00000002028.14	novel	16470	36	NA	NA	-194	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	4.45831169949753	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTGAGCTTCCTTTGG	3622	False	NA	NA	False	AATAAA	-22	NA	44731606	44714651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722041_44722202_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579
m54284U_201201_044215/114950268/ccs	chr6	-	3441	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_5	203.200288971292	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
m54284U_201201_044215/114951108/ccs	chr5	+	4273	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_5	743.5429438674	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108215325_108215439_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/114952954/ccs	chr8	-	3796	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	416	junction_13	66.9152624126215	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73229005	73214332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73224072_73224714_73224900_73228455_73228630_73228901
m54284U_201201_044215/115016769/ccs	chr13	-	5486	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_26	23.0564011314883	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTATCCACATTATT	NA	False	NA	-8	True	AATAAA	-17	NA	59970961	59919693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
m54284U_201201_044215/115016980/ccs	chr4	-	2682	15	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	684	junction_5	53.4872195301011	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
m54284U_201201_044215/115018248/ccs	chr14	-	3082	8	NIC	ENSMUSG00000060373.16	novel	2535	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	157	junction_7	1610.44522934954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52319361_52321571_52321849_52334778_52336002_52341345
m54284U_201201_044215/115081670/ccs	chr6	-	173	1	Intergenic	novelGene_3538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	3199	False	NA	NA	False	NA	NA	NA	128823104	128822931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128822900_128823100
m54284U_201201_044215/115083995/ccs	chr8	+	4215	20	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2092	intron_retention	FALSE	canonical	2	1913	junction_1	396.844457622513	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760547	111782204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
m54284U_201201_044215/115146801/ccs	chr10	+	2788	14	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	40.4205700752365	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	24	True	AATAAA	-17	NA	23672883	23703866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
m54284U_201201_044215/115148067/ccs	chr6	+	4181	13	NNC	ENSMUSG00000030207.16	novel	4221	13	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	20.9165006633519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTGTCCTTTTCTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	135175044	135213240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_135175100_135186030_135186430_135188802_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
m54284U_201201_044215/115212881/ccs	chr9	-	3568	15	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	0	-166	intron_retention	FALSE	canonical	0	0	junction_14	60.350380009963	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6378	False	NA	-27	True	AATAAA	-27	NA	44272967	44259390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
m54284U_201201_044215/115214050/ccs	chr19	+	2689	7	NNC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	-413	-265	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	136.840539802112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTCTTGTTTATTGGG	NA	False	NA	16	True	AATAAA	-16	NA	21249228	21259389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_21249332_21249625_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
m54284U_201201_044215/115277848/ccs	chr3	+	1638	5	NIC	ENSMUSG00000001418.14	novel	4219	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	936	junction_3	74.2596795037522	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGGCTGCCCTAAGGG	4027	False	NA	-34	True	NA	NA	NA	88232361	88235888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88232509_88232983_88233620_88233717_88233937_88235163_88235421_88235509
m54284U_201201_044215/115280714/ccs	chr3	-	250	1	Intergenic	novelGene_1341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGAATGACGTTCCCAG	NA	False	NA	NA	False	NA	NA	NA	8311432	8311182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_8311200_8311400
m54284U_201201_044215/11534767/ccs	chr14	-	1991	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	775	junction_9	85.8071320189962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741050	30734390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_30734592_30734679_30734747_30735123_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
m54284U_201201_044215/11536438/ccs	chr7	-	3995	7	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	178	junction_3	25.2762514801718	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7964	False	NA	-2	True	AATAAA	-15	NA	3695951	3680787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_3681849_3686807_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
m54284U_201201_044215/11537224/ccs	chr2	+	2313	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	33	junction_1	578.05134665962	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120936	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_157121034_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
m54284U_201201_044215/115408983/ccs	chr1	+	188	1	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTAAGCATTGGCTTCT	NA	False	NA	NA	False	NA	NA	NA	17235648	17235836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_17235600_17235800
m54284U_201201_044215/115477315/ccs	chr4	-	163	1	Intergenic	novelGene_1730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGCGAATTACATTGA	NA	False	NA	NA	False	NA	NA	NA	5208608	5208445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_5208400_5208600
m54284U_201201_044215/115672174/ccs	chr14	-	2491	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	101	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	70.0381820064992	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70873317	70841109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70873259
m54284U_201201_044215/115672397/ccs	chr9	+	1884	10	NNC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_8	152.03800694417	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCCTGGCGTTGTTGA	8647	False	NA	21	True	GATAAA	-13	NA	21176601	21185041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184113_21184207_21184549
m54284U_201201_044215/115673731/ccs	chr5	-	181	1	Intergenic	novelGene_2867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	122329158	122328977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_122329000_122329200
m54284U_201201_044215/115736710/ccs	chr9	-	184	1	Intergenic	novelGene_4645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTGCCACCACTGCCC	8623	False	NA	NA	False	NA	NA	NA	20451354	20451170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_20451200_20451400
m54284U_201201_044215/115736836/ccs	chr19	+	195	1	Intergenic	novelGene_9263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGCTGGGCAGTGGTGG	9864	False	NA	NA	False	NA	NA	NA	41858659	41858854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_41858700_41858900
m54284U_201201_044215/115738709/ccs	chr12	-	3542	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	26.5375206076227	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTATAGTTCTGTTTT	NA	False	NA	-2	True	NA	NA	NA	83968641	83840809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83923441_83923587_83968591
m54284U_201201_044215/115738725/ccs	chr7	-	176	1	Intergenic	novelGene_3895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	7519	False	NA	NA	False	NA	NA	NA	73988861	73988685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_73988700_73988900
m54284U_201201_044215/115803664/ccs	chr18	-	2440	2	Intergenic	novelGene_8829	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	108	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACCATTACATACTGTG	8834	False	NA	NA	False	NA	NA	NA	20737578	20735083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_20736604_20736658
m54284U_201201_044215/115934170/ccs	chr2	+	5159	17	NIC	ENSMUSG00000040506.17	novel	5203	18	NA	NA	0	0	intron_retention	TRUE	canonical	3	16	junction_7	27.2367370246511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCTCCTGCTTATTTCT	NA	False	NA	7	True	ATTAAA	-19	NA	91560526	91749194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
m54284U_201201_044215/115935006/ccs	chr8	-	1306	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_3	126.388290596875	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	480	False	NA	-6	True	AATAAA	-18	NA	71085280	71082042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71085245
m54284U_201201_044215/115935571/ccs	chr14	+	2550	4	NIC	ENSMUSG00000040640.12	novel	3339	8	NA	NA	0	1402	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	17.7451088722749	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACATTCTTGTTTGTTTGT	2326	False	NA	NA	False	AATAAA	-21	NA	27344384	27377161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_27344572_27345639_27345707_27374643_27375441_27375662
m54284U_201201_044215/115999325/ccs	chr9	-	4538	17	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_15	69.1425158639748	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTTATTTATTTA	5572	False	NA	47	True	AATAAA	-29	NA	119151493	119067497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119133870_119133984_119151070
m54284U_201201_044215/116000052/ccs	chr6	-	1252	9	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	211.170547188759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	False	NA	-41	True	AATAAA	-18	NA	115014837	114981348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_114981481_114987767_114987831_114989118_114989281_114993043_114993190_115002234_115002386_115009180_115009274_115011116_115011212_115011911_115012095_115014610
m54284U_201201_044215/116000392/ccs	chrX	+	2096	4	NNC	ENSMUSG00000033460.15	novel	2228	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_3	34.8839345385363	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618711	133622659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_133618800_133619668_133619742_133620375_133620475_133620823
m54284U_201201_044215/116001013/ccs	chr5	+	215	1	Intergenic	novelGene_3016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAACACTATCAGCCAC	NA	False	NA	NA	False	NA	NA	NA	140159249	140159464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_140159200_140159500
m54284U_201201_044215/11600929/ccs	chr9	-	203	1	Intergenic	novelGene_5005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCACCCACGAGGTACTA	NA	False	NA	NA	False	NA	NA	NA	95942800	95942597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_95942600_95942800
m54284U_201201_044215/11601362/ccs	chr14	+	4427	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_37	170.363095695635	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
m54284U_201201_044215/11601456/ccs	chr8	+	2120	8	NNC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	173.163365122096	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633577	43646918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_43633650_43636158_43636403_43636739_43636836_43638315_43638496_43640023_43640749_43643105_43643129_43643305_43643407_43646239
m54284U_201201_044215/11601581/ccs	chr7	-	480	3	ISM	ENSMUSG00000006311.9	ENSMUST00000108147.3	1048	6	1092	0	1092	0	3prime_fragment	FALSE	canonical	3	44	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCGAACCTGCGTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	30334185	30333040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_30333260_30333413_30333527_30334037
m54284U_201201_044215/116064647/ccs	chr9	+	7063	14	NIC	ENSMUSG00000041440.19	novel	4455	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	19.7490169031031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCATATGCATATTT	NA	False	NA	17	True	AATAAA	-27	NA	96001414	96066661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_96001666_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
m54284U_201201_044215/116065160/ccs	chr5	-	2249	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-77	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_2	564.425528758926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2243	False	NA	-25	True	AATAAA	-15	NA	138170157	138162861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_138163183_138163313_138163424_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
m54284U_201201_044215/116066350/ccs	chr4	+	1576	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-124	at_least_one_novel_splicesite	FALSE	canonical	3	202	junction_5	2168.7001291096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCTTTTCTTTCTTTT	6	True	NA	29	True	AATAAA	-25	NA	46450959	46472533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470050_46471397_46471468_46472086
m54284U_201201_044215/116196088/ccs	chr16	-	2512	1	Antisense	novelGene_ENSMUSG00000009569.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAAGGTCTGACAGCA	NA	False	NA	NA	False	NA	NA	NA	13212765	13210253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_13210300_13212800
m54284U_201201_044215/116196564/ccs	chr2	-	214	1	Intergenic	novelGene_1184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAAAAAGAATACTTGAT	NA	False	NA	NA	False	NA	NA	NA	156725278	156725064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156725100_156725300
m54284U_201201_044215/116196812/ccs	chr9	+	1674	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-147	intron_retention	FALSE	canonical	3	17440	junction_1	1299.57868172727	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_64080716_64082105_64082278_64082475_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
m54284U_201201_044215/116196970/ccs	chr11	-	2665	16	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_10	72.5416661880146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860799	70833902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
m54284U_201201_044215/116197553/ccs	chrX	-	2508	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	79.6773005455269	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510963_69513723_69513901_69520583
m54284U_201201_044215/116197854/ccs	chr2	+	2463	9	NNC	ENSMUSG00000055612.16	novel	582	3	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	408.468787057224	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	9003	False	NA	NA	False	AATAAA	-16	NA	72306936	72317237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_72307129_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
m54284U_201201_044215/116261174/ccs	chr3	-	3884	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-243	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	285.028444695813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3507	False	NA	-2	True	AATATA	-16	NA	89959822	89907842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/116261252/ccs	chr4	+	2271	12	NIC	ENSMUSG00000028820.14	novel	925	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_9	288.88503246702	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTTTGTTCAAGTAGGA	NA	False	NA	18	True	AATAAA	-19	NA	126915116	126930806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126929600_126929648_126930355_126930443_126930724
m54284U_201201_044215/116261878/ccs	chr8	+	2237	13	NNC	ENSMUSG00000031584.17	novel	347	5	NA	NA	-184	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	492.898083617023	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCAGTGTATTTTC	NA	False	NA	14	True	TATAAA	-17	NA	34142366	34188191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_34142473_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
m54284U_201201_044215/116262400/ccs	chr13	+	3095	17	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	162.861472960919	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
m54284U_201201_044215/116328490/ccs	chr13	-	184	1	Intergenic	novelGene_7151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTCCCCCTCTTCCCT	NA	False	NA	NA	False	NA	NA	NA	62982059	62981875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_62981900_62982100
m54284U_201201_044215/116392340/ccs	chr1	-	6587	41	NNC	ENSMUSG00000026116.12	novel	6698	42	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	55.9871413808564	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAATTGTTTTGTTTTGCT	7132	False	NA	-1	True	AATAAA	-22	NA	36978697	36831274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835361_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
m54284U_201201_044215/116393767/ccs	chr15	-	1562	11	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	-89	406	combination_of_known_splicesites	FALSE	canonical	3	103	junction_2	742.189086419357	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGGTTCCTGAAGTATC	NA	False	NA	-30	True	AATAAA	-25	NA	81283884	81249244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_81249780_81250547_81250691_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
m54284U_201201_044215/116457966/ccs	chr2	-	1998	10	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	175.514974212571	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	NA	False	NA	-14	True	AATAAA	-14	NA	34760974	34742113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755668_34755993_34756108_34756904_34757050_34760761
m54284U_201201_044215/116459534/ccs	chr2	+	3010	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	121.546833167554	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_91480598_91481843_91482000_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
m54284U_201201_044215/116459859/ccs	chr6	-	3616	12	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	27.9506649191301	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673631	112603375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
m54284U_201201_044215/116523227/ccs	chrX	+	4002	9	NNC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_1	178.510810246887	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATCTTGTTTGTGTGT	NA	False	NA	16	True	AATAAA	-25	NA	7708320	7742859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_7708950_7722545_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
m54284U_201201_044215/116523235/ccs	chr11	-	339	2	ISM	ENSMUSG00000020940.14	ENSMUST00000021323.11	1199	10	9064	3	9038	0	3prime_fragment	FALSE	canonical	3	22	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTGGCTGCGCCTAGTG	NA	False	NA	NA	False	AGTAAA	-14	NA	103090310	103089772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_103089945_103090143
m54284U_201201_044215/116588712/ccs	chr8	-	2081	5	NIC	ENSMUSG00000031796.8	novel	1295	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_1	23.0054341406547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTTTACTTTTTTATA	NA	False	NA	-6	True	AATAAA	-24	NA	96161472	96146876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96147298_96147763_96148875_96149410_96149523_96151244_96151325_96161115
m54284U_201201_044215/116589212/ccs	chr7	-	3817	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	1337.88210300532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674539_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201201_044215/116589927/ccs	chr7	+	1592	10	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	0	391	intron_retention	FALSE	canonical	3	1130	junction_7	69.0812725868757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGCTGTCCCTTTGA	NA	False	NA	32	True	AATAAA	-22	NA	15832532	15851055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
m54284U_201201_044215/116590020/ccs	chr8	-	2230	7	NIC	ENSMUSG00000002910.12	novel	2355	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	37.4640568486056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCCGTCTTTTCATTTG	NA	False	NA	-1	True	AATAAA	-20	NA	71292162	71287772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71288639_71288863_71289022_71289501_71289665_71289753_71290191_71291337_71291486_71291622_71291690_71291771
m54284U_201201_044215/116590602/ccs	chr2	-	1661	10	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	65	-352	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	100.051961808494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTTTTACATGCTGG	NA	False	NA	-13	True	AATAAA	-13	NA	155571330	155543948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
m54284U_201201_044215/116656808/ccs	chr17	+	184	1	Intergenic	novelGene_8631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTGGCGCCCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	47813976	47814160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47814000_47814200
m54284U_201201_044215/116720403/ccs	chr6	+	176	1	Intergenic	novelGene_3363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTTAAAAGATCTCCAT	NA	False	NA	NA	False	NA	NA	NA	86385369	86385545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_86385400_86385500
m54284U_201201_044215/116721407/ccs	chr15	+	4040	18	NNC	ENSMUSG00000022463.9	novel	5077	19	NA	NA	0	-2009	intron_retention	FALSE	canonical	3	12	junction_17	162.450737808521	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTCCTCAAGAAGACAGA	2243	False	NA	NA	False	NA	NA	NA	82031451	82086011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82085183
m54284U_201201_044215/116722347/ccs	chr9	+	156	1	Intergenic	novelGene_5041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	102077041	102077197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102077000_102077200
m54284U_201201_044215/116785652/ccs	chr11	+	3666	18	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	56.8118974819688	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3915	False	NA	14	True	ATTAAA	-30	NA	3152733	3194588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
m54284U_201201_044215/116851285/ccs	chr4	+	3781	17	NNC	ENSMUSG00000006445.4	novel	969	4	NA	NA	-5147	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	33.5838502855167	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTTTCATTCCTGGA	9594	False	NA	8	True	AATAAA	-22	NA	141023403	141056695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_141023467_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
m54284U_201201_044215/116851286/ccs	chr1	+	159	1	FSM	ENSMUSG00000102719.2	ENSMUST00000194726.2	3841	1	3098	584	3098	-584	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAATAAATT	8431	False	NA	NA	False	NA	NA	NA	58840039	58840198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58840000_58840200
m54284U_201201_044215/116852523/ccs	chr19	-	2301	20	NIC	ENSMUSG00000024858.15	novel	3376	21	NA	NA	-56	-418	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	62.2372816274677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTATTTGTTTTCCC	NA	False	NA	-29	True	TATAAA	-22	NA	4356306	4337064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
m54284U_201201_044215/116852529/ccs	chr11	-	1119	8	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	284.884366087043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	486	False	NA	-6	True	AATAAA	-16	NA	116029615	116022646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116026016_116026152_116029267_116029448_116029536
m54284U_201201_044215/116853019/ccs	chr7	+	4147	8	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	94.4373239946225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248708	41277957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_41248825_41251171_41251240_41252859_41252959_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
m54284U_201201_044215/116853578/ccs	chr16	+	452	1	FSM	ENSMUSG00000082241.5	ENSMUST00000120931.2	205	1	0	-247	0	247	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATCCAGGAGAGGTCT	NA	False	NA	NA	False	AATAAA	-31	NA	22113776	22114228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22113800_22114200
m54284U_201201_044215/116919124/ccs	chr16	+	1701	8	NIC	ENSMUSG00000022711.17	novel	1842	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	59.2149319282333	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTGTGGCCGAATCAT	NA	False	NA	17	True	AATAAA	-24	NA	8455601	8475395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_8455693_8460601_8460714_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
m54284U_201201_044215/116982774/ccs	chr3	-	4984	35	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	16.8193125114079	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	False	NA	-26	True	AATAAA	-14	NA	83947468	83805515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_83805921_83806483_83806624_83807633_83807723_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
m54284U_201201_044215/117047713/ccs	chr2	+	4410	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	0	629	intron_retention	FALSE	canonical	3	55	junction_1	77.7924589318699	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAACAGCTGTGGTTTCT	7046	False	NA	8	True	AATAAA	-9	NA	181162318	181194671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065
m54284U_201201_044215/117048268/ccs	chr3	-	3440	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	259.029660238749	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/117113055/ccs	chr11	-	193	1	Intergenic	novelGene_5725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACTGGAAGGACATGTT	NA	False	NA	NA	False	NA	NA	NA	21618274	21618081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_21618100_21618300
m54284U_201201_044215/117309856/ccs	chr7	+	2211	14	NIC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	0	524	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	27.7429024987159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAGTTATTTTTAAA	7358	False	NA	10	True	ATTAAA	-22	NA	96600727	96712703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_96600863_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
m54284U_201201_044215/117311347/ccs	chr4	-	3447	6	NNC	ENSMUSG00000039410.17	novel	8598	17	NA	NA	5233	-2356	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	7.55248303539968	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCAAGGTGTGTGCTT	NA	False	NA	-7	True	NA	NA	NA	154414076	154402937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_154405380_154406727_154406903_154407703_154407938_154412716_154412892_154413120_154413291_154413825
m54284U_201201_044215/11732438/ccs	chr11	+	2304	17	NNC	ENSMUSG00000034121.13	novel	688	4	NA	NA	-5016	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	42.5595171495166	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1440	False	NA	18	True	TATAAA	-20	NA	87739024	87754629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87739055_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
m54284U_201201_044215/117440663/ccs	chr16	+	211	1	Intergenic	novelGene_8057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTAAAGTATAGGACTT	NA	False	NA	NA	False	NA	NA	NA	10975821	10976032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_10975800_10976000
m54284U_201201_044215/117440915/ccs	chrX	-	4431	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-126	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	138.734807956675	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224575	59101315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
m54284U_201201_044215/117442777/ccs	chr8	-	1559	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	428	junction_1	272.959695844562	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
m54284U_201201_044215/117508909/ccs	chr2	+	4949	8	NIC	ENSMUSG00000027281.17	novel	4906	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	6.90164133096066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTGTGCAATTT	9751	False	NA	15	True	AATAAA	-23	NA	136733527	136913870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_136733582_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
m54284U_201201_044215/117572918/ccs	chr8	+	2462	9	NIC	ENSMUSG00000005481.19	novel	1551	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2290	junction_7	86.1013211280756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATGGCTCCAGCCCCA	NA	False	NA	26	True	AATAAA	-12	NA	84441896	84449904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
m54284U_201201_044215/117639037/ccs	chr9	+	4208	23	NIC	ENSMUSG00000032485.15	novel	597	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	27.2204423060839	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGCTGAAGTTCTTGT	NA	False	NA	11	True	AATAAA	-23	NA	110162703	110214018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_110162835_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
m54284U_201201_044215/117639207/ccs	chr10	-	1635	8	NIC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	909	junction_5	92.3283846509019	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCATGGCTTGGCGTC	NA	False	NA	-7	True	AATACA	-16	NA	79602744	79594375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
m54284U_201201_044215/117639379/ccs	chr13	-	1203	6	NIC	ENSMUSG00000052180.16	novel	1325	7	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	94	junction_5	331.741827329627	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCAGAACCGAGTGTTTT	NA	False	NA	-7	True	AATAAA	-19	NA	34089206	34063798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_34064316_34064604_34064761_34077786_34077930_34079251_34079370_34081326_34081480_34089090
m54284U_201201_044215/117639437/ccs	chr13	-	173	1	Intergenic	novelGene_7087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAACAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	54963369	54963196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_54963200_54963400
m54284U_201201_044215/117703733/ccs	chr17	-	187	1	Intergenic	novelGene_8393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGCCTAGGCTATCA	8886	False	NA	NA	False	NA	NA	NA	23801143	23800956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_23801000_23801100
m54284U_201201_044215/117704721/ccs	chr2	+	2771	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	433	junction_9	646.991289272941	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120332
m54284U_201201_044215/117705317/ccs	chr1	+	226	1	Intergenic	novelGene_422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATTAGTCTCGCTTAA	NA	False	NA	NA	False	NA	NA	NA	157333706	157333932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_157333700_157333900
m54284U_201201_044215/117768239/ccs	chr4	-	239	1	Intergenic	novelGene_1917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGATTTATATTTTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	83395814	83395575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_83395600_83395800
m54284U_201201_044215/117768315/ccs	chr11	+	186	1	Intergenic	novelGene_5992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAGGCAAAAGGATT	NA	False	NA	NA	False	NA	NA	NA	74648440	74648626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74648400_74648600
m54284U_201201_044215/117768711/ccs	chr7	-	3825	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_3	1292.2405896336	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_110671965_110673035_110673158_110673244_110673469_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201201_044215/117835963/ccs	chrX	-	1899	11	NNC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	63	-34250	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	26.949768088056	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCAGAATAATAGGTCT	NA	False	NA	NA	False	ATTAAA	-17	NA	12628249	12609617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_12609903_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
m54284U_201201_044215/117900563/ccs	chr9	+	5656	1	Genic_Genomic	ENSMUSG00000102097.2	novel	NA	NA	NA	NA	1687	1721	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAAACTCCTCGCA	NA	False	NA	NA	False	NA	NA	NA	96589567	96595223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_96589600_96595200
m54284U_201201_044215/117902123/ccs	chr17	-	3360	17	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_16	78.7249960304858	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTGTCCGTGTTTGTTC	NA	False	NA	-1	True	NA	NA	NA	57138107	57082896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57106249_57106325_57110477_57110740_57111325_57111397_57112357_57112448_57137882
m54284U_201201_044215/117965086/ccs	chr10	-	174	1	Intergenic	novelGene_5485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAGATAAGC	6743	False	NA	NA	False	NA	NA	NA	85121263	85121089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_85121100_85121300
m54284U_201201_044215/117965146/ccs	chr14	+	1078	11	NIC	ENSMUSG00000021932.14	novel	362	5	NA	NA	-108	-481	combination_of_known_junctions	TRUE	canonical	2	10	junction_1	256.284704966957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62529929	62609960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_62530104_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
m54284U_201201_044215/117967017/ccs	chr1	-	2887	12	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	48.2219386991111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6055	False	NA	NA	False	AATAAA	-18	NA	53336174	53228345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53306986_53307090_53314228_53314412_53321099_53321252_53336044
m54284U_201201_044215/117967619/ccs	chr14	-	171	1	Intergenic	novelGene_7518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGCTGCTCTGGAG	NA	False	NA	NA	False	NA	NA	NA	66313340	66313169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_66313200_66313300
m54284U_201201_044215/11798270/ccs	chr13	-	2727	14	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2524.91972805792	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	4751	False	NA	-8	True	AATACA	-15	NA	58550330	58538955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
m54284U_201201_044215/118030674/ccs	chr12	-	4530	1	Antisense	novelGene_ENSMUSG00000021277.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	111216731	111212201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_-_111212200_111216700
m54284U_201201_044215/1181476/ccs	chr6	-	2922	8	NNC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	159	junction_1	1397.39899784695	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397396	39374737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_39376245_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
m54284U_201201_044215/1182138/ccs	chr2	-	4244	15	NIC	ENSMUSG00000027104.19	novel	4195	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_12	95.5978236025853	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722938	73646863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710726_73722818
m54284U_201201_044215/1182142/ccs	chr5	-	4144	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	163	junction_5	145.633410441033	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201201_044215/118227051/ccs	chr8	+	3505	20	NNC	ENSMUSG00000031446.15	novel	2570	16	NA	NA	-730	0	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_1	87.5396230033456	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13154890	13197940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13154951_13156193_13156310_13165469_13165574_13171676_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
m54284U_201201_044215/118228556/ccs	chr18	-	3270	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	48.531593375404	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-23	True	NA	-23	True	AATAAA	-14	NA	6135970	6025216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
m54284U_201201_044215/1182554/ccs	chr10	-	3288	14	NIC	ENSMUSG00000019988.8	novel	3534	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_9	47.0005665331586	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTCTGAGCTTGAACC	NA	False	NA	-1	True	AATAAA	-19	NA	92558266	92520607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
m54284U_201201_044215/118293485/ccs	chr17	-	2498	10	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-72	122	combination_of_known_junctions	FALSE	canonical	1	23	junction_9	213.995384743125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGAGTGGCTTCTTTTT	NA	False	NA	-28	True	NA	NA	NA	66191470	66156702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191216
m54284U_201201_044215/118359033/ccs	chr19	+	7482	17	NIC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_7	40.0169885798519	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568116	47633685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
m54284U_201201_044215/118359687/ccs	chr5	+	3356	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	-93	intron_retention	FALSE	canonical	0	0	junction_4	742.994321983688	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGAGTTGTCTTCTGTT	NA	False	NA	10	True	AAAAAG	-17	NA	108208607	108256042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/118489789/ccs	chr17	+	2490	16	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	174.051639846723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCGGATGTTCTATAAATT	NA	False	NA	-17	True	NA	NA	NA	32255383	32279547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_32255579_32264902_32265204_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
m54284U_201201_044215/118489992/ccs	chrX	+	1982	10	NIC	ENSMUSG00000062070.13	novel	1825	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3907	junction_9	360.180853063541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCCTGTCATACTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	105230768	105247305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246542_105246844
m54284U_201201_044215/118489994/ccs	chr5	+	3588	20	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	453	junction_14	44.6156252519283	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATACTCAGTATTTAT	NA	False	NA	18	True	ATTAAA	-25	NA	45827260	45857469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853887_45856182_45856253_45857189
m54284U_201201_044215/118490256/ccs	chr15	+	2214	6	NIC	ENSMUSG00000023027.14	novel	2365	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	119.054609318581	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTTTTCGGAATGCAAA	NA	False	NA	13	True	ATTAAA	-16	NA	100125751	100159125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_100125964_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
m54284U_201201_044215/118554784/ccs	chr9	+	2057	10	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	51	junction_8	5635.17585471654	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1872	False	NA	20	True	AATAAA	-20	NA	59563858	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59585326_59585509_59586010
m54284U_201201_044215/118620408/ccs	chr13	+	1868	6	NIC	ENSMUSG00000035958.4	novel	1957	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	322.122585361536	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGACTTTTTTCTTCAT	NA	False	NA	20	True	AATAAA	-20	NA	25015663	25026135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_25015913_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
m54284U_201201_044215/118620412/ccs	chr18	-	3640	6	NIC	ENSMUSG00000036223.17	novel	2630	7	NA	NA	0	-298	intron_retention	FALSE	canonical	3	429	junction_5	34.6040460062115	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTTCAAAACGTAC	6765	False	NA	-19	True	AGTAAA	-16	NA	74340850	74329847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_74330123_74330584_74330755_74332970_74335759_74337334_74337460_74339859_74339956_74340664
m54284U_201201_044215/118622616/ccs	chr4	+	1048	5	NNC	ENSMUSG00000029038.10	novel	1472	5	NA	NA	0	-96	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	745.021140639647	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAAGTGTCTGTTGTTG	NA	False	NA	21	True	AATAAA	-21	NA	155789580	155818240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816499_155817929
m54284U_201201_044215/118622986/ccs	chr14	-	190	1	Intergenic	novelGene_7445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTATTCACTTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	52391647	52391457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_52391500_52391600
m54284U_201201_044215/11863995/ccs	chr3	+	2237	4	ISM	ENSMUSG00000051860.14	ENSMUST00000172593.2	1511	8	5617	-1671	440	0	3prime_fragment	FALSE	canonical	2	5	junction_3	2.44948974278318	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATACCTCAGGCTCTT	972	False	NA	NA	False	ATTAAA	-9	NA	30810810	30821315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_30810898_30812474_30812594_30816287_30816399_30819395
m54284U_201201_044215/11864373/ccs	chr16	+	6524	20	NIC	ENSMUSG00000022637.12	novel	3728	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	15.1180030632521	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTATGTTATTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	51851925	52028411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_51852049_51852540_51852623_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
m54284U_201201_044215/118686111/ccs	chr11	+	1922	14	NNC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	188	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_11	1409.40968800383	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGTCATTTTAAAAT	NA	False	NA	22	True	ATTAAA	-22	NA	22940625	22953339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952180_22952402_22952816_22952931_22953136
m54284U_201201_044215/118752101/ccs	chr13	+	2503	10	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	0	79	intron_retention	FALSE	canonical	1	20	junction_5	82.099909023874	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACACTACACACTTAGA	NA	False	NA	15	True	AATAAA	-23	NA	38388920	38411035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38398644_38399039_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
m54284U_201201_044215/118752711/ccs	chr2	+	3632	12	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1351	junction_7	94.8629285158938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	653	False	NA	19	True	AATAAA	-16	NA	26279359	26287134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
m54284U_201201_044215/118817729/ccs	chr7	+	4679	25	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	242.944895443848	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7239	False	NA	NA	False	AAGAAA	-2	NA	109617521	109655816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109642035_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
m54284U_201201_044215/118817985/ccs	chr9	+	4142	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_1	169.097776009147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCCTTTTTGAAAT	NA	False	NA	20	True	AATAAA	-26	NA	48896684	48953817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_48896838_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
m54284U_201201_044215/118883346/ccs	chr7	+	4479	25	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_24	36.1270664537761	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGGTAGTTCCCACTT	NA	False	NA	6	True	AATAAA	-19	NA	133239421	133273908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273097
m54284U_201201_044215/118884375/ccs	chr1	-	3255	9	NNC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_3	37.1817747693679	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5189	False	NA	-15	True	AGTAAA	-16	NA	171108760	171104564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105324_171105378_171105454_171105574_171105707_171106888_171107003_171108097_171108247_171108343_171108446
m54284U_201201_044215/118884855/ccs	chr2	-	194	1	Intergenic	novelGene_1246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAACCCTTGTCACCTG	NA	False	NA	NA	False	NA	NA	NA	166863259	166863065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166863100_166863300
m54284U_201201_044215/118948720/ccs	chr11	+	171	1	Intergenic	novelGene_6309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGCTGGAGAGACAGCTC	NA	False	NA	NA	False	AAAACA	-20	NA	98878856	98879027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98878900_98879000
m54284U_201201_044215/118949140/ccs	chr16	+	1673	9	NNC	ENSMUSG00000022849.6	novel	4680	9	NA	NA	0	-99	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	249.638457323787	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATATACGTGTATATTT	5404	False	NA	8	True	AATATA	-14	NA	35590744	35645819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634414_35634699_35634780_35637521_35637694_35639048_35639133_35645058_35645170_35645252
m54284U_201201_044215/118949806/ccs	chr11	-	3311	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	0	-486	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	1105.29966386441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8136	False	NA	-2	True	AATAAA	-23	NA	50216500	50185779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_50187163_50187884_50187983_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
m54284U_201201_044215/119015407/ccs	chr7	+	3221	13	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	201	junction_6	1620.40727690774	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510361	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28516759_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
m54284U_201201_044215/119080416/ccs	chr19	+	1255	10	NIC	ENSMUSG00000036278.8	novel	1228	11	NA	NA	-62	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	15.0185071014251	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGTCTGGGTCTGGC	8470	False	NA	6	True	AATAAA	-16	NA	7034115	7175422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175277
m54284U_201201_044215/119146579/ccs	chr11	+	1118	7	NNC	ENSMUSG00000010362.10	novel	1124	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	417.624798380343	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGTGTGGTTTGGGTCCC	NA	False	NA	29	True	AATAAA	-28	NA	101518767	101526926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_101518891_101519098_101519279_101521063_101521187_101521651_101521806_101524627_101524727_101525613_101525700_101526573
m54284U_201201_044215/119210262/ccs	chr6	+	3111	22	NNC	ENSMUSG00000029686.16	novel	2385	20	NA	NA	80	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	133.679601389533	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTTGCATT	NA	False	NA	8	True	AATAAA	-13	NA	47430917	47502992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_47431113_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
m54284U_201201_044215/119210854/ccs	chrX	-	197	1	Intergenic	novelGene_9610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACACTTGCTTGTAGCAGA	NA	False	NA	NA	False	NA	NA	NA	108123086	108122889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_108122900_108123100
m54284U_201201_044215/119212215/ccs	chr19	+	179	1	Intergenic	novelGene_9160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGGGGGGGGGTGTT	420	False	NA	NA	False	NA	NA	NA	10535859	10536038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_10535900_10536000
m54284U_201201_044215/119212311/ccs	chr9	-	2193	4	ISM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	1867	0	1867	0	3prime_fragment	FALSE	canonical	3	97	junction_3	15.9652400197707	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789156	20785103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687
m54284U_201201_044215/11928419/ccs	chr5	-	2036	8	NIC	ENSMUSG00000029328.16	novel	1477	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	230	junction_1	297.206243239284	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186754	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
m54284U_201201_044215/119342550/ccs	chr6	+	1840	11	NIC	ENSMUSG00000002871.15	novel	1820	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	18.4325798519903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGATGCCTTTCAGCA	NA	False	NA	19	True	AATAAA	-21	NA	88879298	88889220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887384_88887529_88887633_88887778_88887860_88888664
m54284U_201201_044215/119406643/ccs	chr10	+	3599	18	ISM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	78	61745	0	-51784	5prime_fragment	FALSE	canonical	3	12	junction_5	6.24859845877153	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACTGACCACTAATTATT	NA	False	NA	NA	False	AATAAA	-15	NA	20828523	20894583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811
m54284U_201201_044215/119406905/ccs	chrX	-	179	1	Intergenic	novelGene_9646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTCTTTTTTTTTTTTT	9016	False	NA	NA	False	NA	NA	NA	139348705	139348526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_139348500_139348700
m54284U_201201_044215/119409154/ccs	chr16	-	179	1	Intergenic	novelGene_8216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGAGGTTTGGA	NA	False	NA	-1	True	NA	NA	NA	32279156	32278977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32279000_32279200
m54284U_201201_044215/119473953/ccs	chr18	-	1744	4	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	84	0	intron_retention	FALSE	canonical	3	375	junction_3	11.7756811551038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551103	53539403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_53540138_53542196_53542382_53544058_53544692_53550911
m54284U_201201_044215/119474868/ccs	chr17	-	2695	8	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	431	junction_6	47.9846914363831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	7993	False	NA	-1	True	AATAAA	-19	NA	27423443	27408573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_27409765_27411905_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
m54284U_201201_044215/119537714/ccs	chr4	-	153	1	Intergenic	novelGene_1796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACGCCCGGCCAAGATT	1350	False	NA	NA	False	NA	NA	NA	34881591	34881438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_34881400_34881600
m54284U_201201_044215/119605519/ccs	chr16	+	2008	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	653.897178967119	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
m54284U_201201_044215/119669207/ccs	chr16	-	3314	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	408.143658646989	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
m54284U_201201_044215/119734559/ccs	chr11	-	631	4	NNC	ENSMUSG00000020477.11	novel	995	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_3	1216.61890317205	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCTGGGTCTCTCTCTC	NA	False	NA	-25	True	AATAAA	-18	NA	5657687	5654325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_5654733_5657297_5657410_5657486_5657556_5657644
m54284U_201201_044215/119734878/ccs	chr2	+	2922	18	NNC	ENSMUSG00000027469.17	novel	3654	18	NA	NA	0	-624	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	239.527750485398	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2812	False	NA	29	True	AATAAA	-28	NA	152690001	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
m54284U_201201_044215/119801786/ccs	chr7	-	183	1	Intergenic	novelGene_3679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAAGATGAGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	18803476	18803293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_18803300_18803500
m54284U_201201_044215/119802454/ccs	chr5	-	158	1	Intergenic	novelGene_2551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	34544255	34544097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_34544100_34544300
m54284U_201201_044215/119868154/ccs	chrX	+	3803	19	NNC	ENSMUSG00000034480.19	novel	4208	26	NA	NA	0	-41598	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_18	25.5326588248593	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAATACTCAAT	NA	False	NA	NA	False	AATAAA	-42	NA	128650544	128901681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128900132
m54284U_201201_044215/119931166/ccs	chr2	+	7293	24	NIC	ENSMUSG00000027130.16	novel	6105	25	NA	NA	-232	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	19.1293477952058	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGCTGTAGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	112095937	112193508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_112097438_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
m54284U_201201_044215/119932124/ccs	chr6	-	1725	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_7	583.751379843669	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942253	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942181
m54284U_201201_044215/119996698/ccs	chr5	+	1289	5	NIC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	0	239	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	487.170914566952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAGTGAATTTTTTTTT	606	False	NA	NA	False	ATTAAA	-13	NA	76331796	76354119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76353815
m54284U_201201_044215/119996735/ccs	chr1	+	195	1	Intergenic	novelGene_158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGTGGCATATGTACA	NA	False	NA	NA	False	NA	NA	NA	62462628	62462823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_62462600_62462800
m54284U_201201_044215/119998997/ccs	chr1	-	202	1	Intergenic	novelGene_316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAGTATTAAATCCAC	NA	False	NA	NA	False	NA	NA	NA	132752722	132752520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_132752500_132752700
m54284U_201201_044215/120127642/ccs	chr11	-	185	1	Intergenic	novelGene_6360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	103304868	103304683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_103304700_103304900
m54284U_201201_044215/120194127/ccs	chr19	-	4618	23	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	175.242830343432	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340010	37246141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
m54284U_201201_044215/120195172/ccs	chr9	-	4879	15	NNC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	97.9988806683265	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTTGTGTTTCATAA	2246	False	NA	-19	True	AATAAA	-15	NA	70411007	70332711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
m54284U_201201_044215/120259146/ccs	chr2	+	1973	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	3006	-4	53	0	3prime_fragment	FALSE	canonical	3	200	junction_1	44.5268458348444	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGAGTGTATTGAAACA	NA	False	NA	17	True	AATAAA	-21	NA	32518454	32525070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
m54284U_201201_044215/120259817/ccs	chr2	+	174	1	Intergenic	novelGene_1069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGGAACAGGGA	NA	False	NA	NA	False	NA	NA	NA	130603387	130603561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_130603400_130603600
m54284U_201201_044215/120324329/ccs	chr2	+	7687	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	182.048826274516	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
m54284U_201201_044215/120325024/ccs	chr16	+	4694	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.0681462806789	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482726	31692167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
m54284U_201201_044215/120392222/ccs	chr5	-	2171	10	NNC	ENSMUSG00000029422.16	novel	1595	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_3	142.495310730729	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGTATGCTATTTGC	4323	False	NA	NA	False	AATAAA	-15	NA	123887475	123866488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_123867420_123868517_123868608_123869099_123869330_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
m54284U_201201_044215/120392327/ccs	chr19	+	3276	15	NIC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	68.3643077301933	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4085	False	NA	25	True	AATAAA	-15	NA	30007912	30071122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_30008332_30016463_30016698_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
m54284U_201201_044215/120521074/ccs	chr11	+	3950	22	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	71.3234782435127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072408	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_105073185_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
m54284U_201201_044215/120589074/ccs	chr15	+	5171	2	Intergenic	novelGene_7653	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1235	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGAGTAGCTGGGTAA	NA	False	NA	NA	False	NA	NA	NA	22699825	22705090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_22704559_22704652
m54284U_201201_044215/12058927/ccs	chr8	-	2333	5	Intergenic	novelGene_4400	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_4	28.6574597618142	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCCATTTTTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	89779653	89772259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779568
m54284U_201201_044215/12059653/ccs	chr1	-	4010	14	NIC	ENSMUSG00000037474.14	novel	4212	15	NA	NA	0	-128	combination_of_known_splicesites	FALSE	canonical	2	13	junction_7	131.601019761881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTAAGATGGCTTGG	NA	False	NA	-8	True	AATAAA	-22	NA	191307656	191269604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
m54284U_201201_044215/12061417/ccs	chr7	+	1910	9	NIC	ENSMUSG00000030967.16	novel	5008	10	NA	NA	53	201	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	38.7699545395658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	132532923	132585926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_132533275_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
m54284U_201201_044215/120652653/ccs	chr15	+	2025	12	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	0	49206	0	10871	5prime_fragment	TRUE	canonical	3	47	junction_4	7.60382678775509	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCGTAAGCCGTGTTTG	2907	False	NA	NA	False	AAAAAG	-25	NA	88867111	88890145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899
m54284U_201201_044215/120719270/ccs	chrX	+	1830	7	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_1	718.530541375166	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357361	139376889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_139357478_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
m54284U_201201_044215/120719780/ccs	chr1	+	1199	9	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_5	1020.66944177584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201201_044215/120783263/ccs	chr12	-	1417	9	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	74.9615526453395	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7660	False	NA	-3	True	AATATA	-18	NA	110807373	110774231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
m54284U_201201_044215/120783552/ccs	chr16	+	1815	6	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	230	junction_3	17.5658760100372	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094172	17096525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_17094333_17094497_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
m54284U_201201_044215/120784141/ccs	chr2	+	1368	10	NIC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	0	-112	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	691.896267112668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCACCGCCCACTGCT	5118	False	NA	12	True	AATAAA	-13	NA	71219603	71271854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_71219649_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
m54284U_201201_044215/120784289/ccs	chr7	+	2498	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	43.5085248605051	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1308	False	NA	21	True	AATAAA	-15	NA	5083233	5101177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_5083477_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
m54284U_201201_044215/120849059/ccs	chr2	+	4943	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	113.010311973045	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_90509853_90510115_90510228_90514265_90514370_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
m54284U_201201_044215/120850810/ccs	chr17	+	4024	30	NNC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	412.655562855139	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9538	False	NA	10	True	AATAAA	-11	NA	35220026	35235298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230443_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
m54284U_201201_044215/120915563/ccs	chr11	-	2243	10	NNC	ENSMUSG00000025173.14	novel	2321	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	138.714023252567	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGCCATATGTAATG	NA	False	NA	1	True	AATAAA	-33	NA	121245227	121218049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221025_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
m54284U_201201_044215/120980667/ccs	chr5	+	3426	8	NIC	ENSMUSG00000041264.17	novel	3757	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_2	136.605793644131	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_149121617_149125154_149125284_149130704_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
m54284U_201201_044215/120981456/ccs	chr2	-	1192	7	NNC	ENSMUSG00000016257.16	novel	1553	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	315.353593429485	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCAGCTCTTCCCAT	NA	False	NA	-4	True	AATAAA	-45	NA	174314727	174306859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_174307305_174307518_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
m54284U_201201_044215/121046755/ccs	chr12	-	1243	8	NIC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	79.9971938283348	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	7660	False	NA	-3	True	AATATA	-18	NA	110807373	110774231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110807179
m54284U_201201_044215/121047887/ccs	chr9	+	1950	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_5	561.049635841207	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATTTTTGCTTCTA	NA	False	NA	16	True	AATAAA	-16	NA	65537840	65567810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558867_65558987_65566416_65566487_65566719
m54284U_201201_044215/121242048/ccs	chr17	-	1069	3	NNC	ENSMUSG00000085492.8	novel	781	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	31	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATGTATTTTTTAA	NA	False	NA	-15	True	AATAAA	-17	NA	71905750	71895551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_71895980_71897482_71897518_71905144
m54284U_201201_044215/121242478/ccs	chr14	+	5022	36	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_29	208.710102627485	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGTTCATGTTATTAAG	NA	False	NA	17	True	AATAAA	-18	NA	56640153	56762489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56730574_56730862_56737884_56738049_56741374_56741495_56743383_56743465_56746735_56746793_56749667_56749785_56751492_56751662_56753792_56753929_56759830_56760021_56761762_56761863_56762269
m54284U_201201_044215/12124610/ccs	chr19	+	2415	13	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_11	259.501445082682	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGTTGTGATTTTCAG	244	False	NA	14	True	ATTAAA	-14	NA	46064408	46072900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072024_46072189_46072283_46072450
m54284U_201201_044215/12125309/ccs	chr2	+	2771	13	NNC	ENSMUSG00000038963.16	novel	3002	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	16.583123951777	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCTTGTGTGATGTTTT	NA	False	NA	10	True	AATATA	-19	NA	180098126	180116645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114473_180114607_180114627_180114895_180114961_180115306_180115456_180115896
m54284U_201201_044215/12126095/ccs	chr7	-	204	1	Intergenic	novelGene_3681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAGGAGAGGAGA	2173	False	NA	NA	False	NA	NA	NA	18923608	18923404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_18923400_18923600
m54284U_201201_044215/121309277/ccs	chr12	+	6260	25	NIC	ENSMUSG00000042700.17	novel	6179	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	32.3541331294095	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTCTTTATTTTTT	NA	False	NA	21	True	NA	NA	NA	82216193	82497048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_82216278_82216789_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
m54284U_201201_044215/121374516/ccs	chr6	-	4891	1	ISM	ENSMUSG00000042599.9	ENSMUST00000002305.9	9566	20	65276	0	13169	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTCTGACTTGTTGTT	NA	False	NA	92	True	TATAAA	-33	NA	39118447	39113556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_39113600_39118400
m54284U_201201_044215/121440079/ccs	chr15	+	212	1	Intergenic	novelGene_7706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTAAATTGAAAGAGGAGA	NA	False	NA	NA	False	TTTAAA	-4	NA	50096953	50097165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_50097000_50097200
m54284U_201201_044215/121571180/ccs	chr5	+	1522	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	455.54773007337	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTCTATTCCTTTT	5421	False	NA	43	True	AATAAA	-45	NA	100666322	100695669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100695169
m54284U_201201_044215/121571556/ccs	chr16	-	3034	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_11	352.92972070244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854782_4854922_4865597_4865678_4866613_4866651_4867669
m54284U_201201_044215/121571685/ccs	chr15	-	882	9	NIC	ENSMUSG00000115987.2	novel	911	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	331.20912483656	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGGCAGCTATACT	9603	False	NA	-25	True	AATAAA	-17	NA	76510274	76506308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76509333_76509406_76510188
m54284U_201201_044215/121635451/ccs	chr7	-	5668	7	NIC	ENSMUSG00000001802.17	novel	3877	7	NA	NA	-86	0	intron_retention	FALSE	canonical	3	19	junction_6	4.56131072780134	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGCTGTTCCAGTCTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	34914803	34900303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_34902095_34902353_34902487_34902692_34903807_34904105_34904321_34905461_34905601_34910859_34912613_34914280
m54284U_201201_044215/121701767/ccs	chr6	+	5006	25	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	118.352397231976	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1976	False	NA	28	True	AATAAA	-30	NA	65019841	65093045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_65019946_65020189_65020430_65027026_65027114_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
m54284U_201201_044215/121702972/ccs	chr11	+	1090	6	NNC	ENSMUSG00000018411.18	novel	779	5	NA	NA	-8326	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	204.272954646473	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGAAAAAAAAACATGTA	9530	False	NA	5	True	AATAAA	-9	NA	104200532	104219261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_104200605_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
m54284U_201201_044215/121765895/ccs	chr7	-	3550	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_23	280.350064722964	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7301	False	NA	0	True	NA	NA	NA	126101213	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101120
m54284U_201201_044215/121766261/ccs	chr18	-	187	1	Intergenic	novelGene_8802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTAGTAGGTCTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	6460714	6460527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_6460500_6460700
m54284U_201201_044215/121767073/ccs	chr12	-	1479	5	NNC	ENSMUSG00000021276.11	novel	1579	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	177.687225202039	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATATTAATCCTGTTG	3370	False	NA	-10	True	NA	NA	NA	110855558	110839595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_110840587_110843274_110843405_110846118_110846249_110850323_110850493_110855499
m54284U_201201_044215/121768142/ccs	chrX	+	2793	4	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	266	junction_2	15.121728296285	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100839695_100840283_100840444_100840965_100841990_100842072
m54284U_201201_044215/121768442/ccs	chr2	+	2789	9	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	126.560015407711	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAATCTGCGTGGTGT	NA	False	NA	10	True	AAGAAA	-43	NA	93017928	93032094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_93018093_93019433_93019569_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
m54284U_201201_044215/121831466/ccs	chr11	+	4314	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	35.4983123192468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTGCCTGTCTGTCC	NA	False	NA	18	True	TATAAA	-22	NA	77873579	77921365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77918145_77918245_77919052_77919136_77919668_77919808_77920142
m54284U_201201_044215/121833168/ccs	chr9	+	207	1	Intergenic	novelGene_4961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTGTAATAACACAATGTA	1236	False	NA	NA	False	AATGAA	-10	NA	77963540	77963747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_77963500_77963700
m54284U_201201_044215/121896962/ccs	chr5	+	187	1	Intergenic	novelGene_3052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	143966062	143966249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_143966100_143966200
m54284U_201201_044215/121897712/ccs	chr2	-	196	1	Intergenic	novelGene_1117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAATGCACAAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	152072578	152072382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_152072400_152072600
m54284U_201201_044215/121899027/ccs	chr6	-	2546	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_21	200.491199493594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884777_71884831_71885617
m54284U_201201_044215/121899210/ccs	chr7	+	2887	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	215.895415536845	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201201_044215/121899858/ccs	chrX	+	1751	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	0	at_least_one_novel_splicesite	FALSE	canonical	3	102	junction_1	978.331643950841	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74147761	74153383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_74147882_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
m54284U_201201_044215/12191288/ccs	chr1	+	9257	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	483.03078555711	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555675	118612898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597250_118603304_118603357_118605117
m54284U_201201_044215/12192014/ccs	chr15	+	1936	7	NIC	ENSMUSG00000022564.8	novel	1725	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	29.8533452434099	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGCTTCTCCTTGTCT	NA	False	NA	13	True	AATAAA	-14	NA	76130974	76134104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76131101_76131839_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
m54284U_201201_044215/12192153/ccs	chr9	-	5298	24	NIC	ENSMUSG00000032462.15	novel	5045	24	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_23	50.4068888381741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTGTCTTCTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	99022227	98920453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99021563
m54284U_201201_044215/12192253/ccs	chr2	+	6996	30	NIC	ENSMUSG00000027087.12	novel	7054	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	66	junction_1	18.5760640227655	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGGATTCTATCC	NA	False	NA	21	True	AATAAA	-21	NA	83554795	83637260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_83555264_83566856_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
m54284U_201201_044215/122030662/ccs	chr16	+	1363	11	NIC	ENSMUSG00000022663.4	novel	2057	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	116.159201099181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTATTTGTTTAATAAAA	NA	False	NA	-13	True	AATAAA	-17	NA	44979147	45008257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_44979535_44982768_44982811_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
m54284U_201201_044215/122093643/ccs	chr2	+	2323	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	83	junction_11	835.502441994344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
m54284U_201201_044215/122094189/ccs	chr5	-	2833	8	NNC	ENSMUSG00000063015.13	novel	2804	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	182.803898498151	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTGTAGGAGTTTTTG	NA	False	NA	-2	True	AATAAA	-18	NA	93354287	93329791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93351125_93351222_93353772
m54284U_201201_044215/122160652/ccs	chrX	+	4691	11	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	374	junction_10	98.8130052169248	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158375066
m54284U_201201_044215/122226538/ccs	chr15	-	2138	14	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4595	-240	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	6.43492688565058	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCGCCAATTTGAATA	NA	False	NA	NA	False	NA	NA	NA	36560313	36504797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36560155
m54284U_201201_044215/122226651/ccs	chr10	-	2350	15	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1936	junction_8	235.007826617389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899668	116886910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
m54284U_201201_044215/122227361/ccs	chr7	-	155	1	Intergenic	novelGene_4170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	140999630	140999475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_140999500_140999600
m54284U_201201_044215/122292024/ccs	chr12	-	2753	11	NIC	ENSMUSG00000021270.14	novel	3281	11	NA	NA	67	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	4149.70050124102	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110669095	110657461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110669056
m54284U_201201_044215/122356077/ccs	chr11	+	1712	16	NIC	ENSMUSG00000025142.19	novel	1820	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_14	232.798472694494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563881	120600270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599937_120600073_120600169
m54284U_201201_044215/122356131/ccs	chr12	+	3586	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_8	113.573842725688	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201201_044215/122356534/ccs	chr15	+	5739	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-2428	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	160.492913259781	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	1177	False	NA	16	True	AATAAA	-17	NA	25756422	25813759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_25756451_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
m54284U_201201_044215/122357646/ccs	chr4	+	3370	14	NIC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	113	junction_7	17.0970082853022	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931917	155943760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
m54284U_201201_044215/122421719/ccs	chr9	+	4146	23	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_7	176.835807721632	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCCTTTTTGAAAT	NA	False	NA	20	True	AATAAA	-26	NA	48896684	48953817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
m54284U_201201_044215/122489609/ccs	chr12	+	4162	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	64	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	365.461044638042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	False	NA	3	True	AATAAA	-17	NA	110413617	110549496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_110413820_110414405_110414472_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
m54284U_201201_044215/122552340/ccs	chr8	+	3103	13	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	339.855718978248	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063814	72077555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72074929_72075346_72075475_72075733_72075941_72076136
m54284U_201201_044215/12256039/ccs	chr7	-	189	1	Intergenic	novelGene_3728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	502	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTGTTTTTGTTTTT	NA	False	NA	-3	True	NA	NA	NA	27286319	27286130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_27286100_27286300
m54284U_201201_044215/12257178/ccs	chr4	+	3341	11	NIC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	170.449083306423	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_136039059_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
m54284U_201201_044215/12257916/ccs	chr4	+	3344	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	149.446598202454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096259	154105970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104443_154104494
m54284U_201201_044215/122685443/ccs	chr5	+	3631	19	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_6	252.672438368555	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201201_044215/122751511/ccs	chr1	-	177	1	Intergenic	novelGene_152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTTTTAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	60231154	60230977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_60231000_60231200
m54284U_201201_044215/122815844/ccs	chr4	+	1308	7	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	242.454577647489	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266562	118272308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_118266747_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
m54284U_201201_044215/122816298/ccs	chr11	+	3454	7	NIC	ENSMUSG00000038366.16	novel	386	4	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	239.383931513096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	6814	False	NA	10	True	AATAAA	-21	NA	97692748	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97692961_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201201_044215/122817207/ccs	chr3	-	1692	1	Intergenic	novelGene_1351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAATAAATAAATAA	NA	False	NA	NA	False	AATAAA	-32	NA	11080250	11078558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_11078600_11080200
m54284U_201201_044215/122880072/ccs	chr4	-	1349	7	NIC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	268	junction_3	43.8735556900611	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9092	False	NA	NA	False	AATAAA	-14	NA	155976226	155973318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975873_155976087
m54284U_201201_044215/122880359/ccs	chr7	-	4448	11	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	45	junction_4	10.8115678788971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTTTTGTCTCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	81104506	80996773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
m54284U_201201_044215/122946967/ccs	chr14	+	4184	38	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	172.580123990261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201201_044215/122947929/ccs	chrX	+	3917	24	ISM	ENSMUSG00000041718.17	ENSMUST00000154827.8	4168	27	17939	0	93	0	3prime_fragment	FALSE	canonical	3	957	junction_21	118.352985224418	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118957	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201201_044215/123013514/ccs	chr4	-	5137	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	31.5274229054918	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5309	False	NA	NA	False	AATAAA	-21	NA	131802632	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
m54284U_201201_044215/123013856/ccs	chr6	+	182	1	Intergenic	novelGene_3239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTTTATTTAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	41089361	41089543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_41089400_41089500
m54284U_201201_044215/123077627/ccs	chr5	-	2388	7	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	685	junction_2	55.9833804703582	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCGTAGCTTTGTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	32942983	32893648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896718_32922116_32922293_32931739_32931811_32942892
m54284U_201201_044215/123143747/ccs	chr8	+	190	1	Intergenic	novelGene_4553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACCTCATTCCCCA	NA	False	NA	NA	False	NA	NA	NA	121256956	121257146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_121257000_121257100
m54284U_201201_044215/123143840/ccs	chr3	+	1774	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	329	junction_1	60.1405760605009	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	7032	False	NA	16	True	AATAAA	-24	NA	108291154	108295495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108291243_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
m54284U_201201_044215/123208710/ccs	chr9	+	4972	19	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_17	76.9171632342223	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760867	109912241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908965_109910488_109910679_109910802
m54284U_201201_044215/123210000/ccs	chr12	+	2277	12	NNC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	57.2923487312267	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1849	False	NA	11	True	AATAAA	-16	NA	84363891	84390497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378537_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
m54284U_201201_044215/12321179/ccs	chr5	+	2112	10	NNC	ENSMUSG00000029247.18	novel	1862	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	185	junction_1	1259.86605206101	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77099249_77099615_77099683_77104395_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201201_044215/12323394/ccs	chr17	-	144	1	Intergenic	novelGene_8431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATGATAAGTGAATTTC	NA	False	NA	NA	False	NA	NA	NA	26471207	26471063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26471100_26471200
m54284U_201201_044215/123273695/ccs	chr5	-	3374	1	Antisense	novelGene_ENSMUSG00000029199.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGCCAGGCAGTGCA	NA	False	NA	NA	False	NA	NA	NA	65553323	65549949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_65549900_65553300
m54284U_201201_044215/123340182/ccs	chr11	+	4443	8	NIC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	0	757	intron_retention	FALSE	canonical	3	226	junction_5	22.0611395342811	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGTGTGGCTTAATTT	NA	False	NA	9	True	AATAAA	-19	NA	105017304	105031977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_105017433_105017601_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
m54284U_201201_044215/123404696/ccs	chr11	-	3871	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-508	intron_retention	FALSE	canonical	3	238	junction_17	63.3457038850469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3801	False	NA	-4	True	ATTAAA	-19	NA	60111430	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
m54284U_201201_044215/123471543/ccs	chr17	+	2382	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	233.26347525682	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTATTGGCTTAGGTGC	NA	False	NA	NA	False	TATAAA	-25	NA	56388423	56407607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
m54284U_201201_044215/123537419/ccs	chr9	-	2687	10	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	0	408	intron_retention	FALSE	canonical	3	181	junction_9	24.6986779273309	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTCTCCTAAGGCAGT	9248	False	NA	-1	True	ATTAAA	-27	NA	26910845	26886263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_26887057_26888851_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
m54284U_201201_044215/123601088/ccs	chr7	+	1687	8	NIC	ENSMUSG00000063229.16	novel	912	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	2903.73895492817	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46490898	46505051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_46491077_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
m54284U_201201_044215/123601656/ccs	chr17	-	3531	9	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	-360	0	combination_of_known_junctions	FALSE	canonical	1	29	junction_4	246.389934859361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTCTATTGTCCACT	NA	False	NA	NA	False	AATAAA	-31	NA	66192309	66155412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
m54284U_201201_044215/123669279/ccs	chr7	+	3943	18	NNC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	5078	0	intron_retention	FALSE	canonical	2	11	junction_2	100.680315611132	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130203125	130366515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_130203462_130203566_130203668_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
m54284U_201201_044215/123732859/ccs	chr15	+	2650	17	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	488.35229583135	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	19	True	AAAAAG	-16	NA	81756684	81799334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
m54284U_201201_044215/123733176/ccs	chr2	+	2363	1	Intergenic	novelGene_762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAACAGATCCAGGAA	5433	False	NA	NA	False	NA	NA	NA	35346995	35349358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_35347000_35349400
m54284U_201201_044215/123798396/ccs	chr2	+	2524	2	Fusion	ENSMUSG00000045822.5_ENSMUSG00000017764.3	novel	2708	2	NA	NA	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTCTTGTCTGGTTTA	3063	False	NA	16	True	AATAAA	-19	NA	164647017	164668791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_164647352_164666601
m54284U_201201_044215/123798398/ccs	chr2	-	3060	16	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	164.700725222717	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652910	93525975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93651954_93652027_93652731
m54284U_201201_044215/123799569/ccs	chr13	-	4977	27	NNC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	87.0331841766633	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGACTTTGTGCCTTTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	98951716	98859910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891762_98892073_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98933428_98933525_98942813_98942906_98951583
m54284U_201201_044215/123863139/ccs	chr11	-	192	1	Intergenic	novelGene_5920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAGTAGAGATGTAAGGA	854	False	NA	NA	False	TTTAAA	-5	NA	67921320	67921128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_67921100_67921300
m54284U_201201_044215/123863255/ccs	chr5	+	789	5	NNC	ENSMUSG00000029522.13	novel	557	4	NA	NA	-1153	0	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_2	919.936546724827	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGATTGTTATCTC	NA	False	NA	30	True	AATAAA	-21	NA	115603167	115612781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_115603279_115604200_115604380_115608843_115609001_115610051_115610180_115612567
m54284U_201201_044215/123864103/ccs	chr8	-	222	1	Intergenic	novelGene_4440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTAAGTGTGTGATAT	NA	False	NA	NA	False	TTTAAA	-8	NA	106376229	106376007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106376000_106376200
m54284U_201201_044215/12386520/ccs	chr3	-	2413	1	NIC	ENSMUSG00000078784.9	novel	435	4	NA	NA	0	342	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGATTAAGTAGATCATA	NA	False	NA	NA	False	NA	NA	NA	14676314	14673901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_14673900_14676300
m54284U_201201_044215/123865663/ccs	chr8	+	2915	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	264.070050811403	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063814	72077555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075852_72075941_72076136
m54284U_201201_044215/12387789/ccs	chr11	-	3363	13	NIC	ENSMUSG00000038909.17	novel	3470	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	258.98824244012	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201072	95165084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
m54284U_201201_044215/12388837/ccs	chr15	+	2248	10	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	245	junction_2	21.6800528449085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	4826	False	NA	24	True	AATAAA	-27	NA	76215543	76219107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
m54284U_201201_044215/123931074/ccs	chr7	-	182	1	Intergenic	novelGene_4072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAAAATAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	122836949	122836767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_122836800_122836900
m54284U_201201_044215/123996869/ccs	chr2	+	4961	1	NIC	ENSMUSG00000015932.9	novel	1911	4	NA	NA	230	-22814	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCAAC	NA	False	NA	NA	False	NA	NA	NA	143757469	143762430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_143757500_143762400
m54284U_201201_044215/124059683/ccs	chr5	+	144	1	Intergenic	novelGene_2864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAACCAAACAAAAAATCCC	NA	False	NA	NA	False	NA	NA	NA	122254613	122254757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_122254600_122254800
m54284U_201201_044215/124059705/ccs	chrX	-	176	1	Intergenic	novelGene_9710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTGCTAGGCAGG	NA	False	NA	NA	False	NA	NA	NA	159769547	159769371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_159769400_159769500
m54284U_201201_044215/124061679/ccs	chr5	-	3761	11	NNC	ENSMUSG00000029097.12	novel	3790	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	21.9474372080204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAATAGAAATATTTAT	7626	False	NA	NA	False	TATAAA	-21	NA	35732414	35713546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730238_35731423_35731539_35731902
m54284U_201201_044215/124125323/ccs	chr2	-	167	1	Intergenic	novelGene_1192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATATTCAGAATTG	NA	False	NA	-8	True	NA	NA	NA	157433944	157433777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_157433800_157433900
m54284U_201201_044215/124127198/ccs	chr7	-	1027	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	1463	0	1463	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTGATTCTTTTATTA	NA	False	NA	5	True	AATAAA	-36	NA	30021857	30020830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_30020800_30021900
m54284U_201201_044215/124191830/ccs	chrX	+	2212	4	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	53.074371299987	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618711	133622659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_133618800_133619668_133619858_133620375_133620475_133620823
m54284U_201201_044215/124257959/ccs	chr8	+	979	3	NNC	ENSMUSG00000031490.7	novel	1997	3	NA	NA	0	143	at_least_one_novel_splicesite	FALSE	canonical	3	189	junction_2	7094	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATGAGTAATCTATCT	NA	False	NA	18	True	AAAAAG	-11	NA	27750356	27765669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_27750579_27763350_27763546_27765107
m54284U_201201_044215/124258913/ccs	chr8	-	1591	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	351.765524710708	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050419_71050546_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
m54284U_201201_044215/124259138/ccs	chr16	-	1751	11	NIC	ENSMUSG00000022948.17	novel	1826	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	28.7090578041147	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCAGACTGTCTTAG	NA	False	NA	-4	True	AATAAA	-18	NA	93400703	93380347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400453
m54284U_201201_044215/124323821/ccs	chr18	+	157	1	Intergenic	novelGene_9003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	67869332	67869489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_67869300_67869500
m54284U_201201_044215/124454322/ccs	chr1	+	878	4	NNC	ENSMUSG00000039323.19	novel	906	3	NA	NA	-646	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	1672.39096970641	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGTGTGTGTCTTAC	644	False	NA	11	True	ATTAAA	-11	NA	72863015	72891626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_72863056_72888244_72888472_72888722_72888864_72891156
m54284U_201201_044215/124455536/ccs	chr11	-	2323	10	NIC	ENSMUSG00000018736.15	novel	2382	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	74.7099742130432	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCGAGATTGCTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	68743867	68712259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
m54284U_201201_044215/124455644/ccs	chr15	+	1964	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	129	junction_8	403.492951590819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	195	False	NA	28	True	AATAAA	-14	NA	38662187	38692687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687259_38687354_38689368_38689467_38690776_38690904_38691855
m54284U_201201_044215/124518754/ccs	chr7	+	3215	29	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	60.0176844686597	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGGCGTT	9922	False	NA	36	True	AATATA	-18	NA	24603829	24626019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
m54284U_201201_044215/124518792/ccs	chr11	+	4054	26	NIC	ENSMUSG00000020926.17	novel	5102	26	NA	NA	0	569	intron_retention	TRUE	canonical	3	16	junction_1	5.06754378372797	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTGATTCTGGGGCTG	NA	False	NA	18	True	AATAAA	-22	NA	102652264	102669862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102652511_102652973_102653159_102660719_102660797_102660946_102661014_102662060_102662147_102662260_102662337_102662562_102662808_102662870_102662939_102663280_102663356_102663437_102663510_102663660_102663828_102664219_102664305_102664402_102664494_102664600_102664653_102665091_102665192_102665267_102665340_102665457_102665551_102665856_102665938_102666475_102666527_102666618_102666683_102666891_102666992_102667141_102667262_102667354_102667524_102667614_102667730_102667813_102667905_102668456
m54284U_201201_044215/124520917/ccs	chr17	-	5847	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_20	71.4790004127086	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503107	32415247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
m54284U_201201_044215/12453202/ccs	chr2	+	5890	35	NIC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	0	intron_retention	FALSE	canonical	3	459	junction_10	64.8156622214427	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90509853_90510115_90510228_90514265_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
m54284U_201201_044215/12453344/ccs	chr15	-	3226	8	NIC	ENSMUSG00000079020.10	novel	7509	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_7	37.6183845631741	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAACTTAATTTCAGC	NA	False	NA	NA	False	ATTAAA	-30	NA	73517611	73453405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73517342
m54284U_201201_044215/12454252/ccs	chr12	+	6181	21	NIC	ENSMUSG00000020594.15	novel	6311	21	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	40.619299600067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGCCTGATTACATCA	NA	False	NA	38	True	GATAAA	-22	NA	8724358	8802581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
m54284U_201201_044215/1245933/ccs	chr11	-	1588	11	NIC	ENSMUSG00000018537.17	novel	1755	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_10	69.6100567446975	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATATACATACTTATTT	NA	False	NA	8	True	NA	NA	NA	97591323	97580645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97590361_97590475_97591085
m54284U_201201_044215/1246392/ccs	chr2	+	1413	3	NNC	ENSMUSG00000086454.8	novel	770	3	NA	NA	0	-7113	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	77	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTCCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	104389528	104391282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_104389830_104390068_104390321_104390422
m54284U_201201_044215/124649843/ccs	chr2	+	913	2	Intergenic	novelGene_884	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	57	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGTATAATCTTCATC	NA	False	NA	NA	False	AATAAA	-16	NA	80026598	80042029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_80026685_80041202
m54284U_201201_044215/124649858/ccs	chr8	+	3963	16	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	-52	intron_retention	FALSE	canonical	3	601	junction_11	55.3551764115657	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTTCATTGTGTCTTT	NA	False	NA	17	True	AATAAA	-19	NA	13807676	13831886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
m54284U_201201_044215/124650146/ccs	chr4	+	1664	6	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3072	junction_5	104.807633309793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCATTTTTGTTCCTA	8716	False	NA	28	True	AATACA	-36	NA	148675959	148679076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148678455_148678539_148678663_148678743
m54284U_201201_044215/1246774/ccs	chr8	-	1699	7	NIC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	0	713	intron_retention	FALSE	canonical	0	0	junction_3	218.907451271587	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3861	False	NA	-8	True	AATAAA	-19	NA	95328354	95301571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95328124
m54284U_201201_044215/124716110/ccs	chr15	+	893	4	NNC	ENSMUSG00000041736.8	novel	837	4	NA	NA	6062	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	92.1013934024164	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACTCTGTACTTAGTGGA	NA	False	NA	21	True	AATAAA	-21	NA	83454137	83458404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_83454247_83455585_83455797_83456400_83456540_83457970
m54284U_201201_044215/124717416/ccs	chr19	+	170	1	Intergenic	novelGene_9353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTTATTAATTTTAT	NA	False	NA	1	True	NA	NA	NA	58057957	58058127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_58058000_58058100
m54284U_201201_044215/124781752/ccs	chr7	-	3423	24	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	299.408945167182	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	6928	False	NA	-7	True	NA	NA	NA	126101586	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126091365_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
m54284U_201201_044215/124782981/ccs	chr8	+	162	1	Intergenic	novelGene_4216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGACGTACGCAGTTTTAT	NA	False	NA	NA	False	NA	NA	NA	15569774	15569936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_15569800_15569900
m54284U_201201_044215/124783381/ccs	chr7	-	2865	13	NIC	ENSMUSG00000030718.10	novel	2772	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	340	junction_6	24.5554927098241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTGAGGAGCTGTCCT	NA	False	NA	-8	True	AATAAA	-17	NA	100021141	99975943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004569_100020929
m54284U_201201_044215/1248074/ccs	chr7	+	1868	11	NIC	ENSMUSG00000030802.15	novel	3405	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	550	junction_8	39.8121840646805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGGCCCCAAATGTTG	NA	False	NA	28	True	ATTAAA	-20	NA	127503253	127507780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
m54284U_201201_044215/124847042/ccs	chr7	+	5475	14	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	249	junction_1	49.7978160686501	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	103	False	NA	20	True	ATTAAA	-20	NA	4140058	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
m54284U_201201_044215/124847095/ccs	chr11	+	3440	25	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	30191	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	109.425488347094	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCATAATTTGTTC	2027	False	NA	8	True	NA	NA	NA	87018013	87141700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040178_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
m54284U_201201_044215/124847707/ccs	chr8	+	1381	8	NIC	ENSMUSG00000019478.18	novel	1419	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	159.435483721121	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTACACTGTCCTGCTC	NA	False	NA	12	True	AATAAA	-21	NA	124532723	124562026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124557009_124557127_124559541_124559638_124560753_124560887_124561432
m54284U_201201_044215/124847718/ccs	chr10	+	158	1	Intergenic	novelGene_5194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAATAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	12318127	12318285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_12318100_12318300
m54284U_201201_044215/124912070/ccs	chr2	+	3508	21	NIC	ENSMUSG00000027624.21	novel	5904	21	NA	NA	0	857	combination_of_known_junctions	FALSE	canonical	3	23	junction_12	31.2878171178496	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAATTACCTGACTG	7784	False	NA	22	True	AATAAA	-32	NA	156262971	156382763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352676_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
m54284U_201201_044215/124912637/ccs	chr2	-	184	1	Intergenic	novelGene_1311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAAATGCTGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	179718954	179718770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_179718800_179719000
m54284U_201201_044215/124913483/ccs	chr17	+	3912	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	262	junction_9	141.34416450461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1236	False	NA	12	True	AATAAA	-20	NA	24888720	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897688_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854
m54284U_201201_044215/124913960/ccs	chr6	+	177	1	Intergenic	novelGene_3399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGGTCAATAGCGCC	NA	False	NA	NA	False	NA	NA	NA	95000512	95000689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_95000500_95000700
m54284U_201201_044215/124914147/ccs	chrX	-	3845	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	0	-396	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	62.1628144548264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCAGTGTGTAATGTGT	NA	False	NA	NA	False	AATAAA	-34	NA	110373152	110298285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
m54284U_201201_044215/124914247/ccs	chr18	+	1349	7	NIC	ENSMUSG00000024480.10	novel	978	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	269.615157833037	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCAGTGTTGACTTTTTC	NA	False	NA	NA	False	AATAAA	-26	NA	46874964	46923690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_46875149_46887437_46887530_46890448_46890503_46891069_46891182_46912254_46912327_46913727_46913836_46922963
m54284U_201201_044215/124977312/ccs	chr11	-	2573	4	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	263.53536553732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678472	54608281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54678385
m54284U_201201_044215/124977556/ccs	chr18	+	177	1	Intergenic	novelGene_9013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAATTCTCAGTGG	NA	False	NA	NA	False	NA	NA	NA	73897516	73897693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_73897500_73897700
m54284U_201201_044215/124977995/ccs	chr9	-	195	1	Intergenic	novelGene_5127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGAACTGCTCACTGG	5489	False	NA	NA	False	NA	NA	NA	114362744	114362549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_114362500_114362700
m54284U_201201_044215/124978294/ccs	chr1	+	4459	7	NIC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	0	-1025	intron_retention	FALSE	canonical	3	67	junction_1	11.3968806648525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATACGGTGTGAAGAC	NA	False	NA	24	True	NA	NA	NA	36550947	36566293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_36552235_36558032_36558177_36559158_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
m54284U_201201_044215/124978587/ccs	chr1	-	178	1	Intergenic	novelGene_287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	127773911	127773733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_127773700_127773900
m54284U_201201_044215/125043592/ccs	chr9	-	179	1	Intergenic	novelGene_4894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAATACATCTTTT	2569	False	NA	NA	False	NA	NA	NA	66124012	66123833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66123800_66124000
m54284U_201201_044215/125044090/ccs	chr12	-	3617	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	82	-406	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_19	141.673300588795	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2760	False	NA	-9	True	AATAAA	-18	NA	59058721	59005574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054018_59058631
m54284U_201201_044215/125045351/ccs	chr7	+	173	1	Intergenic	novelGene_4133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	132751787	132751960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_132751800_132752000
m54284U_201201_044215/125173871/ccs	chr12	-	1449	1	Intergenic	novelGene_6553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAACTATATACAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	4967258	4965809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_4965800_4967300
m54284U_201201_044215/12518110/ccs	chr13	-	2723	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	186	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	340.23314806368	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626376	111562691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589906_111590031_111603384_111603505_111623956_111624905_111626251
m54284U_201201_044215/125305871/ccs	chr17	+	224	1	Intergenic	novelGene_8445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAAGAAAGTAATGG	NA	False	NA	NA	False	NA	NA	NA	27250948	27251172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27250900_27251200
m54284U_201201_044215/125306799/ccs	chr2	-	3989	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	440.218520760725	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627396	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
m54284U_201201_044215/125306849/ccs	chr17	-	3033	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	0	-1032	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_10	207.346479352797	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8737	False	NA	-4	True	AATAAA	-19	NA	24470321	24442203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459758_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
m54284U_201201_044215/125307102/ccs	chr19	-	2960	6	NIC	ENSMUSG00000033610.17	novel	7414	7	NA	NA	323	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	44.4639179560236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTTAGTGTACATGTTA	NA	False	NA	-12	True	AATAAA	-18	NA	34856532	34788293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_34789788_34791091_34791218_34798499_34798624_34804519_34804774_34818156_34818510_34855923
m54284U_201201_044215/125436812/ccs	chr1	-	1334	11	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_10	148.435305773256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	-8	True	AATAAA	-18	NA	91326537	91303552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91326372
m54284U_201201_044215/125503577/ccs	chr2	-	4333	3	NIC	ENSMUSG00000095362.8	novel	1576	4	NA	NA	0	2800	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	355.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	-4	True	NA	NA	NA	177482129	177470783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_177474890_177476312_177476440_177482029
m54284U_201201_044215/125567225/ccs	chr16	-	2401	10	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	582	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_8	820.614103079419	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAAGTGTTGGTTTTCTT	NA	False	NA	-23	True	AATAAA	-35	NA	22084676	22064615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
m54284U_201201_044215/125567474/ccs	chr19	-	3714	5	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	479	junction_4	24.1764348074732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218548	7203037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7205795_7207086_7207649_7211468_7211522_7212427_7212524_7218302
m54284U_201201_044215/125569559/ccs	chr18	+	2949	22	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	269.410879925481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	13	True	NA	72	True	ATTAAA	-28	NA	3383256	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_3383398_3384001_3384140_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
m54284U_201201_044215/125634174/ccs	chr12	-	177	1	Intergenic	novelGene_6580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTTAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	17998909	17998732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_17998700_17998900
m54284U_201201_044215/125635282/ccs	chr14	-	414	1	Intergenic	novelGene_7563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTTAATTAATACTAAC	NA	False	NA	NA	False	NA	NA	NA	79828516	79828102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_79828100_79828500
m54284U_201201_044215/125700494/ccs	chr16	+	2821	26	Fusion	ENSMUSG00000022682.9_ENSMUSG00000022681.16	novel	3582	18	NA	NA	0	0	multi-exon	TRUE	canonical	3	20	junction_17	251.545005118368	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAGATGACTTTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	13598576	13653315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
m54284U_201201_044215/125764769/ccs	chr2	-	2308	14	NIC	ENSMUSG00000009566.13	novel	2404	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	298	junction_5	37.0663885449245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTATTCTCCTAGCTCC	NA	False	NA	-14	True	AATAAA	-19	NA	32584147	32572621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
m54284U_201201_044215/125766355/ccs	chr5	+	811	2	Intergenic	novelGene_2802	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	64	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACTCCATTCATAAAAAC	651	False	NA	7	True	AATAAA	-18	NA	115341970	115343315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115342214_115342747
m54284U_201201_044215/125831560/ccs	chr7	-	3386	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	59	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	253.996551027537	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	7301	False	NA	0	True	NA	NA	NA	126101213	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
m54284U_201201_044215/125832014/ccs	chr14	+	905	10	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	combination_of_known_splicesites	FALSE	canonical	3	239	junction_2	190.414168473765	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569516	62609960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_62569626_62584016_62584092_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
m54284U_201201_044215/12583360/ccs	chr14	+	3416	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	112.817699556999	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640153	56726892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
m54284U_201201_044215/125895103/ccs	chr19	+	184	1	Intergenic	novelGene_9127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGTTACAGGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	6921712	6921896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6921700_6921900
m54284U_201201_044215/125897265/ccs	chr15	-	222	1	Intergenic	novelGene_7910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGATCATACCCCTTGT	NA	False	NA	NA	False	NA	NA	NA	92298012	92297790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_92297800_92298000
m54284U_201201_044215/125962274/ccs	chr5	+	2009	14	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	554	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	273.456399389124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTGTGGTAAGCTTT	NA	False	NA	22	True	GATAAA	-11	NA	31652110	31668757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31652610_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
m54284U_201201_044215/126026256/ccs	chr17	-	2863	13	NNC	ENSMUSG00000059811.14	novel	3618	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	20	junction_8	102.287856344512	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3823	False	NA	NA	False	ATTAAA	-21	NA	80203480	80156491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168579_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
m54284U_201201_044215/126026649/ccs	chr10	+	3047	8	NIC	ENSMUSG00000071253.9	novel	3145	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	28.5328310719352	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGATGGCTTGGTTTTTT	NA	False	NA	18	True	ATTAAA	-19	NA	62756445	62782277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_62756661_62764074_62764168_62766081_62766216_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
m54284U_201201_044215/126028492/ccs	chr10	-	169	1	Intergenic	novelGene_5475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAGA	8451	False	NA	NA	False	NA	NA	NA	82762678	82762509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_82762500_82762700
m54284U_201201_044215/126092514/ccs	chr7	-	2965	20	NIC	ENSMUSG00000060279.15	novel	3301	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	208.086227598905	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578920	44549808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551139_44552172_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44578703
m54284U_201201_044215/126156956/ccs	chr2	+	5663	44	NNC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_26	200.935801494747	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATGTGGCAACTTTC	4868	False	NA	18	True	ATTAAA	-19	NA	30176428	30234278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220749_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
m54284U_201201_044215/126223425/ccs	chr19	-	2178	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	348.515143940053	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGAGTCCGTTCTCT	NA	False	NA	NA	False	NA	NA	NA	41921737	41910730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921690
m54284U_201201_044215/126224646/ccs	chr11	-	3032	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	409	junction_9	49.7241369549876	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_83970604_83972863_83972938_83975539_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
m54284U_201201_044215/126224680/ccs	chr11	+	205	1	Intergenic	novelGene_6064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTATTACAGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	78143685	78143890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_78143700_78143900
m54284U_201201_044215/126225117/ccs	chr2	+	4018	21	NIC	ENSMUSG00000027478.16	novel	4015	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	20.6421898063166	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491373	153529650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
m54284U_201201_044215/126288280/ccs	chr7	-	3004	5	NNC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	218	0	intron_retention	FALSE	canonical	3	387	junction_1	181.38770630889	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126625978	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475
m54284U_201201_044215/126356245/ccs	chr8	-	2688	7	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	186.712271214889	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGTGACTGATGGCTT	NA	False	NA	-1	True	AATAAA	-23	NA	40964759	40945580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_40947157_40948736_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
m54284U_201201_044215/126419165/ccs	chr7	+	3433	5	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	79	junction_1	294.015730871666	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201201_044215/126421170/ccs	chr8	+	2585	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	464	junction_1	173.205128471779	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201201_044215/126421607/ccs	chr2	+	2527	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	132	junction_8	825.582559156546	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332
m54284U_201201_044215/12649095/ccs	chr2	-	1934	13	NIC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_6	29.3976567471325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4547	False	NA	-2	True	AATAAA	-20	NA	181223801	181210944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
m54284U_201201_044215/12649208/ccs	chr6	-	2828	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-964	combination_of_known_junctions	FALSE	canonical	3	44	junction_4	251.358274676846	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113520	148081540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
m54284U_201201_044215/12650362/ccs	chr5	-	3671	6	NIC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	0	2659	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	71.4047617459788	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTGTGCTGCCTGCCT	NA	False	NA	NA	False	AATAAA	-11	NA	97259455	97241131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_97243920_97245337_97245429_97247404_97247540_97251218_97251375_97256024_97256188_97259117
m54284U_201201_044215/12650904/ccs	chr9	+	3278	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	232.186649056314	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1163	False	NA	64	True	NA	NA	NA	108394301	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108394440_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201201_044215/126550121/ccs	chr15	+	2254	8	NIC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	554	junction_1	185.288743228905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGGCTC	NA	False	NA	29	True	AATAAA	-17	NA	103181327	103208292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_103181369_103197527_103197597_103199101_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
m54284U_201201_044215/126552798/ccs	chr13	+	179	1	Intergenic	novelGene_7310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATAGGTGTAGG	NA	False	NA	NA	False	NA	NA	NA	113658895	113659074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_113658900_113659100
m54284U_201201_044215/126615612/ccs	chr4	-	174	1	Intergenic	novelGene_1971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGAAGAAGAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	106119196	106119022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_106119000_106119200
m54284U_201201_044215/126616020/ccs	chr17	-	2251	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	822.802257869748	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514733	80507508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
m54284U_201201_044215/126618201/ccs	chr15	+	3441	19	NNC	ENSMUSG00000037617.13	novel	3646	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.4173998513349	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCCTGCGTGTCTGTAT	182	False	NA	NA	False	AATAAA	-25	NA	36179513	36235767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_36179524_36181841_36181990_36183802_36183963_36186752_36186879_36190617_36190683_36191271_36191382_36192149_36192256_36195521_36195653_36197883_36197991_36200347_36200508_36210688_36210968_36211245_36211346_36216312_36216466_36221551_36221713_36224254_36224388_36227281_36227409_36233348_36233490_36234446_36234816_36234912
m54284U_201201_044215/126682492/ccs	chr9	+	1173	9	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	332.405249657703	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914210	20920127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918659_20918837_20918926_20919037_20919118_20919196_20919789
m54284U_201201_044215/126748630/ccs	chr3	+	3452	16	NNC	ENSMUSG00000025758.11	novel	3479	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_2	89.6866148814241	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTTATTGGCTAAATA	7808	False	NA	27	True	AATAAA	-23	NA	40754476	40771318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_40754719_40755434_40755531_40756223_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
m54284U_201201_044215/126879366/ccs	chr3	-	171	1	Intergenic	novelGene_1382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCTTCACAAATATGT	NA	False	NA	NA	False	NA	NA	NA	34766467	34766296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_34766300_34766500
m54284U_201201_044215/126879728/ccs	chr2	+	602	2	Intergenic	novelGene_924	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAGAAAATCTGGCATG	NA	False	NA	NA	False	NA	NA	NA	91067483	91068405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91067747_91068066
m54284U_201201_044215/126943577/ccs	chr1	-	7144	25	NNC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	40.708994365155	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74544965	74474669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483652_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
m54284U_201201_044215/126944950/ccs	chr4	+	4513	18	NNC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	179.435716819668	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/127010016/ccs	chr6	+	2848	10	NNC	ENSMUSG00000029781.8	novel	549	2	NA	NA	5481	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	244.203062639413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTGGCTTTATGGTATT	NA	False	NA	36	True	CATAAA	-14	NA	56814524	56856343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_56814733_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
m54284U_201201_044215/12714292/ccs	chr2	-	2393	17	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	-5252	-53	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	34.4382940017359	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCCTCCTGATGAC	NA	False	NA	-5	True	AATAAA	-16	NA	71164436	71105086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71158777_71158882_71163948_71164065_71164384
m54284U_201201_044215/12714912/ccs	chr11	+	2848	6	NIC	ENSMUSG00000020514.9	novel	722	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1080	junction_1	124.290948986642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTTCATTGAATTATT	1481	False	NA	12	True	AGTAAA	-15	NA	58062486	58070391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_58062540_58062619_58062669_58063858_58066169_58066957_58067036_58068042_58068113_58070103
m54284U_201201_044215/12715118/ccs	chr5	+	2930	17	NIC	ENSMUSG00000014668.16	novel	3146	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	100.727800749098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283725	110319838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
m54284U_201201_044215/12715928/ccs	chr10	-	3067	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	111	junction_12	34.2502027569019	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390955	79376079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
m54284U_201201_044215/127402980/ccs	chr9	+	2369	1	Antisense	novelGene_ENSMUSG00000056919.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTAACCCTTGGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	87072838	87075207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_87072800_87075200
m54284U_201201_044215/127403910/ccs	chr4	+	1323	11	NIC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	302.350392756484	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGCTGAGCCCTGGAT	6603	False	NA	15	True	AATAAA	-26	NA	135975262	136002209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_135975429_135981056_135981120_135981775_135981954_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992240_135995319_135995475_135998543_135998691_136000954_136001027_136002090
m54284U_201201_044215/127404481/ccs	chr19	+	2504	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_2	84.0640555296898	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043484	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38043530_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/127467692/ccs	chr15	+	237	1	Intergenic	novelGene_7882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGGTTTATTTTAGCT	NA	False	NA	NA	False	NA	NA	NA	84519893	84520130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_84519900_84520100
m54284U_201201_044215/127468178/ccs	chr4	+	295	1	Intergenic	novelGene_2176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTTTTGAAATCATC	NA	False	NA	NA	False	NA	NA	NA	130865813	130866108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_130865800_130866100
m54284U_201201_044215/127469550/ccs	chr14	+	3970	24	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	0	718	combination_of_known_splicesites	FALSE	canonical	2	7	junction_19	112.132617946615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56640153	56725241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418
m54284U_201201_044215/127535624/ccs	chr1	+	2992	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	175	junction_2	73.1663257550206	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201201_044215/127730954/ccs	chr10	+	1262	5	NNC	ENSMUSG00000019848.15	novel	1369	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	10.280442597476	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTATTCCTTACTGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	45165497	45194213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_45165672_45190656_45191005_45191163_45191376_45192526_45192636_45193794
m54284U_201201_044215/127731555/ccs	chr15	-	185	1	Intergenic	novelGene_7674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAACACCACAACCAA	NA	False	NA	NA	False	NA	NA	NA	35281737	35281552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_35281600_35281700
m54284U_201201_044215/12779674/ccs	chrX	+	7145	5	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	979	junction_3	313.815531005079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72246536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72245552_72245645
m54284U_201201_044215/12780463/ccs	chr14	+	4681	12	NIC	ENSMUSG00000095463.9	novel	3589	13	NA	NA	0	474	intron_retention	FALSE	canonical	3	160	junction_8	20.4692876167489	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGACATTTTAAACAGAAA	7301	False	NA	NA	False	AATAAA	-20	NA	69574622	69604139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
m54284U_201201_044215/12781136/ccs	chr12	+	2729	7	NIC	ENSMUSG00000021134.18	novel	1527	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	289	junction_6	621.078273828849	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992307	80997281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996490
m54284U_201201_044215/12781255/ccs	chr17	+	3081	9	NIC	ENSMUSG00000024457.17	novel	3187	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_1	72.8807887923834	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148064	37170290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_37148157_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
m54284U_201201_044215/12782004/ccs	chr14	+	1591	11	NNC	ENSMUSG00000022110.14	novel	1545	12	NA	NA	0	-136	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	493.082346064022	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGGTCTCTTTTCT	NA	False	NA	14	True	TATAAA	-17	NA	73790205	73833087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828238_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
m54284U_201201_044215/127862416/ccs	chrX	-	191	1	Intergenic	novelGene_9503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTCAGTGCCAGTGG	NA	False	NA	NA	False	NA	NA	NA	73054340	73054149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_73054100_73054300
m54284U_201201_044215/127862461/ccs	chr7	+	173	1	Intergenic	novelGene_4167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGTGTTTAAACA	NA	False	NA	NA	False	NA	NA	NA	140932083	140932256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140932100_140932300
m54284U_201201_044215/127927942/ccs	chr7	-	2724	7	NIC	ENSMUSG00000035596.15	novel	2878	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	178	junction_4	23.9002556936578	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTGTGAGTATAACTG	7964	False	NA	-2	True	AATAAA	-15	NA	3695951	3680787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694935_3695038_3695118_3695739
m54284U_201201_044215/127992025/ccs	chr9	-	4299	27	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_16	40.2004776385414	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866556	45849172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45858926_45858996_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
m54284U_201201_044215/128059759/ccs	chr7	-	2672	12	NIC	ENSMUSG00000030824.18	novel	4853	13	NA	NA	0	229	intron_retention	FALSE	canonical	3	464	junction_6	39.1671560839242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCTGTGGCTCAGTTGGC	NA	False	NA	-13	True	ATTAAA	-16	NA	45159830	45142302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
m54284U_201201_044215/128123132/ccs	chr8	+	203	1	Intergenic	novelGene_4550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACGCTTACCCTAGCA	2971	False	NA	NA	False	NA	NA	NA	120631696	120631899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_120631700_120631900
m54284U_201201_044215/128123391/ccs	chr2	+	2792	9	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	134.845976951483	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAATCTGCGTGGTGT	NA	False	NA	10	True	AAGAAA	-43	NA	93017928	93032094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_93018093_93019433_93019569_93027241_93027324_93027953_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
m54284U_201201_044215/128123943/ccs	chr1	+	4096	19	NIC	ENSMUSG00000037461.11	novel	5347	20	NA	NA	0	-65	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	68.7819061765807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTACCTTTTTTTTCTCT	8319	False	NA	33	True	AATAAA	-22	NA	191307873	191354793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
m54284U_201201_044215/128125179/ccs	chr15	+	181	1	Intergenic	novelGene_7872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGGCAGAGCTTGAT	NA	False	NA	NA	False	NA	NA	NA	83308923	83309104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_83308900_83309100
m54284U_201201_044215/128255172/ccs	chr16	+	862	2	Intergenic	novelGene_8132	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAGGAATCTGCTGTTAT	NA	False	NA	NA	False	NA	NA	NA	18854540	18859460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18854906_18858963
m54284U_201201_044215/128256815/ccs	chr12	+	2821	16	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	0	16114	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	43.646254771235	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTGTGTTCAGTTATG	NA	False	NA	NA	False	AATAAA	-18	NA	4967406	5021108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5020405
m54284U_201201_044215/128321780/ccs	chr4	+	4838	5	NNC	ENSMUSG00000039662.17	novel	4919	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_1	48.5952672592712	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGGAGTCCTGTATCAG	4612	False	NA	3	True	AATAAA	-18	NA	152381760	152391578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_152382026_152383145_152383231_152384127_152384298_152384993_152385212_152387478
m54284U_201201_044215/128450768/ccs	chr13	+	6464	6	ISM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	20417	0	-9590	0	3prime_fragment	FALSE	canonical	3	56	junction_4	14.3303872941383	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTGTTTATTTTC	NA	False	NA	13	True	AATAAA	-17	NA	56871239	56890190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_+_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
m54284U_201201_044215/128452713/ccs	chr18	+	3067	11	NNC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	397.213242478143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	20	True	AATAAA	-19	NA	56840821	56886496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_56841547_56861472_56861630_56862358_56862646_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
m54284U_201201_044215/128453029/ccs	chr2	+	4139	6	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078864.11	novel	1077	4	NA	NA	0	2805	multi-exon	FALSE	canonical	3	56	junction_3	79.4742725666615	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	177190007	177415070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177190111_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
m54284U_201201_044215/12845452/ccs	chr15	-	4228	33	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	-231	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	54.0647398379942	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1656	False	NA	-10	True	ATTAAA	-18	NA	73295061	73077181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
m54284U_201201_044215/12846648/ccs	chrX	+	4384	6	ISM	ENSMUSG00000041649.14	ENSMUST00000039545.5	4407	8	486	0	486	0	3prime_fragment	FALSE	canonical	3	100	junction_1	23.8964432499902	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTTGAGATTTTCA	NA	False	NA	19	True	NA	NA	NA	152143094	152178793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_+_152143480_152153840_152153915_152165504_152166067_152167590_152167703_152168369_152168510_152175682
m54284U_201201_044215/12847580/ccs	chr16	-	6854	29	NIC	ENSMUSG00000022973.19	novel	7012	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	15.5596285565024	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTGACTTCTTTACTC	2446	False	NA	-20	True	AATAAA	-13	NA	90807951	90732988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807860
m54284U_201201_044215/128584389/ccs	chr3	-	587	2	NNC	ENSMUSG00000097639.3	novel	2161	2	NA	NA	0	-1453	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATTTAAAAGACCCTAG	NA	False	NA	NA	False	NA	NA	NA	41447625	41439911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_41440396_41447522
m54284U_201201_044215/128713041/ccs	chr9	-	2752	8	NNC	ENSMUSG00000008429.9	novel	2781	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	36.7145636454183	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACAGCCTTATGGGATAT	NA	False	NA	NA	False	AATAAA	-14	NA	25063116	25019427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_25020302_25020735_25020851_25021735_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
m54284U_201201_044215/128714254/ccs	chr1	-	2466	14	NIC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	167	0	combination_of_known_junctions	FALSE	canonical	3	382	junction_13	1964.96669047456	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAGACTTAATACTTCC	NA	False	NA	-29	True	AGTAAA	-15	NA	86286524	86278217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286288
m54284U_201201_044215/128845261/ccs	chr1	+	1970	12	NNC	ENSMUSG00000026117.11	novel	1338	6	NA	NA	299	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	9.30653373968708	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTCTCATCTTCCCT	NA	False	NA	4	True	AATAAA	-17	NA	36810371	36821899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_36810653_36810869_36811031_36817233_36817373_36817460_36817546_36817627_36817672_36817831_36817884_36818197_36818394_36818765_36818973_36819917_36820111_36820199_36820341_36820426_36820540_36821541
m54284U_201201_044215/128910939/ccs	chr18	+	6699	24	NNC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	0	339	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_20	71.6353927161918	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTAGACAAAATTCT	NA	False	NA	154	True	ATTAAA	-17	NA	34910099	34972052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964479_34964617_34966363_34966541_34967269_34967405_34970642
m54284U_201201_044215/128976454/ccs	chr4	+	3095	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	551.676057321887	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4706	False	NA	NA	False	AATAAA	-17	NA	135583442	135593126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590836_135590888_135591039
m54284U_201201_044215/129040466/ccs	chr12	+	2012	15	NIC	ENSMUSG00000021177.17	novel	2036	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	128.512367387067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACAGGCCTGGAATGA	NA	False	NA	19	True	ATTAAA	-19	NA	99850775	99921478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_99850812_99857435_99858005_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
m54284U_201201_044215/12910678/ccs	chr2	-	3577	17	NNC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	79.205207175728	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCTATTCCAAATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	91540864	91504963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512455_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
m54284U_201201_044215/129106972/ccs	chr17	+	4112	27	NNC	ENSMUSG00000035842.11	novel	618	5	NA	NA	178	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	36.6042323029074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCATGATCAAGTATGAGA	NA	False	NA	28	True	ATTAAA	-23	NA	66430785	66459169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_66430837_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
m54284U_201201_044215/129108182/ccs	chr14	+	865	8	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	208	junction_2	184.198207352397	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508528	8520749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_8508579_8515106_8515198_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
m54284U_201201_044215/129238163/ccs	chr5	+	1449	12	ISM	ENSMUSG00000028932.9	ENSMUST00000030769.7	1785	13	1468	0	1468	0	3prime_fragment	FALSE	canonical	3	1482	junction_9	138.585355743117	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991748	22008785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
m54284U_201201_044215/129303695/ccs	chr14	+	1594	11	NIC	ENSMUSG00000021916.17	novel	1498	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	48.6193377165917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGCTTCCCCATTT	3526	False	NA	8	True	AATAAA	-19	NA	30723356	30733947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30723386_30726651_30726748_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
m54284U_201201_044215/129304894/ccs	chr1	+	4403	9	NIC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	59	junction_8	9.73396116696589	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170324	183191020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183187850_183189427_183189583_183190053
m54284U_201201_044215/129304910/ccs	chr11	+	5659	26	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	0	0	intron_retention	FALSE	canonical	2	109	junction_20	77.0319414269172	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599190	3640477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
m54284U_201201_044215/129305283/ccs	chrX	-	172	1	Intergenic	novelGene_9480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATAAACTGGATTA	NA	False	NA	NA	False	NA	NA	NA	59040869	59040697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_59040700_59040900
m54284U_201201_044215/129368693/ccs	chr2	+	1930	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	0	-435	intron_retention	FALSE	canonical	3	800	junction_1	80.685157709186	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	164675726	164681504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_164675771_164675949_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
m54284U_201201_044215/129370109/ccs	chr5	-	1533	9	NIC	ENSMUSG00000040013.12	novel	1447	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_8	311.352668809824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCAGTACAATTCATTG	NA	False	NA	-1	True	AATAAA	-20	NA	135378868	135320557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_135320966_135366468_135366562_135368331_135368442_135368775_135368971_135373502_135373623_135374943_135375147_135376730_135376821_135378471_135378590_135378672
m54284U_201201_044215/129500919/ccs	chr3	+	6862	25	NIC	ENSMUSG00000051278.13	novel	7046	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	23.1480740739556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTTATGTGGAAAAAAAAG	NA	False	NA	NA	False	ATTAAA	-22	NA	127347137	127411672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
m54284U_201201_044215/129565672/ccs	chr3	+	2061	17	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_13	307.253858549815	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4849	False	NA	20	True	ATTAAA	-23	NA	34074246	34123494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116054_34116181_34118267_34118469_34122309_34122402_34123065
m54284U_201201_044215/129566013/ccs	chr19	-	5907	21	NIC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	309.803421543404	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8739	False	NA	-31	True	AATAAA	-17	NA	60779096	60749554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_60750743_60751502_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
m54284U_201201_044215/129567549/ccs	chr8	-	194	1	Intergenic	novelGene_4338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACCAGAGTAGCTGAA	NA	False	NA	NA	False	NA	NA	NA	73176467	73176273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_73176300_73176500
m54284U_201201_044215/129630361/ccs	chr7	+	3493	13	NNC	ENSMUSG00000030987.6	novel	619	5	NA	NA	-505	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	14.8847423745107	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101916507	102086525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_101916571_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
m54284U_201201_044215/129631175/ccs	chr7	+	878	4	ISM	ENSMUSG00000030649.19	ENSMUST00000106973.8	650	5	-8	-64	0	0	intron_retention	FALSE	canonical	3	48	junction_1	258.681700594035	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	7817	False	NA	25	True	AATAAA	-25	NA	101545614	101548751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_101545658_101547148_101547279_101547760_101547821_101548106
m54284U_201201_044215/129631751/ccs	chr14	+	4459	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_40	178.133594529499	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
m54284U_201201_044215/129762079/ccs	chr2	-	4312	20	NIC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	165.564509023521	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740936	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
m54284U_201201_044215/129762920/ccs	chr11	+	5516	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	0	0	intron_retention	FALSE	canonical	2	294	junction_3	63.6763974620895	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107751	106139965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
m54284U_201201_044215/129763404/ccs	chr8	-	189	1	Intergenic	novelGene_4333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAGACCAGCGG	4056	False	NA	NA	False	NA	NA	NA	72158898	72158709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_72158700_72158900
m54284U_201201_044215/129763545/ccs	chr5	-	164	1	Intergenic	novelGene_2766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTAAAGCTT	NA	False	NA	NA	False	NA	NA	NA	110429982	110429818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_110429800_110430000
m54284U_201201_044215/129764050/ccs	chrX	+	781	3	NNC	ENSMUSG00000047844.4	novel	837	3	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_2	2040.5	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCAGTCATCTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	135039797	135041192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_135039916_135040271_135040349_135040606
m54284U_201201_044215/12978033/ccs	chr7	-	3237	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	3	70	junction_6	275.463228762025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGCTGTGTGTTGTGGT	NA	False	NA	-7	True	AATAAA	-16	NA	44198212	44182174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
m54284U_201201_044215/129893601/ccs	chr13	+	8516	12	NIC	ENSMUSG00000039087.18	novel	8395	12	NA	NA	-194	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_10	28.9242384557992	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGACCAACCTGTGAGTTC	NA	False	NA	6	True	AATAAA	-22	NA	38009756	38135981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_38010029_38072846_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
m54284U_201201_044215/129957948/ccs	chr11	+	181	1	Intergenic	novelGene_6004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	75299787	75299968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75299800_75300000
m54284U_201201_044215/129959732/ccs	chrX	-	1547	8	NIC	ENSMUSG00000025257.6	novel	1508	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_7	33.0126753640761	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTCGTAAGAGTA	NA	False	NA	-2	True	AATAAA	-17	NA	150799291	150787577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799119
m54284U_201201_044215/129959779/ccs	chr11	-	2587	6	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	292	0	intron_retention	FALSE	canonical	3	232	junction_1	26.8223787162884	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784630	77771440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_77772081_77772326_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
m54284U_201201_044215/130024750/ccs	chr2	-	2248	9	NIC	ENSMUSG00000002105.16	novel	2469	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	17.0105665690476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTCCACATACTAGG	4286	False	NA	0	True	AATAAA	-15	NA	90900643	90892135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895926_90896046_90896357_90896472_90898775_90899085_90900499
m54284U_201201_044215/130024832/ccs	chr6	+	1842	14	NNC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	1106.35836881034	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTTGTGTTTCCAT	NA	False	NA	35	True	ATTAAA	-29	NA	55014991	55056485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029221_55040211_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
m54284U_201201_044215/130025959/ccs	chr11	-	159	1	Intergenic	novelGene_6407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	107026326	107026167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107026200_107026300
m54284U_201201_044215/130090661/ccs	chr15	+	2587	12	NIC	ENSMUSG00000078932.9	novel	2041	13	NA	NA	0	723	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	8.52221210564216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTTGATAATTATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	91083696	91145820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_91083802_91115782_91115823_91119943_91120083_91123134_91123268_91123620_91123670_91126772_91126889_91129815_91130334_91131061_91131132_91132717_91132779_91137065_91137130_91141563_91141647_91144611
m54284U_201201_044215/130220355/ccs	chr9	+	1654	13	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	1708.58941983016	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765781	108778691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108765938_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
m54284U_201201_044215/130222641/ccs	chr1	+	2097	12	NIC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	128	573	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	111.657164185956	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGATCTTATTTTTGC	222	False	NA	15	True	AATAAA	-18	NA	128172026	128205330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_128172290_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
m54284U_201201_044215/130285965/ccs	chr8	-	4395	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_25	176.905624557276	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573194
m54284U_201201_044215/130286749/ccs	chr13	-	3849	7	NIC	ENSMUSG00000003062.14	novel	1327	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	699	junction_6	55.5660267909568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTGTGTTGTCTGTAT	NA	False	NA	0	True	AATAAA	-19	NA	19579965	19541845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_19542300_19543147_19543222_19551913_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
m54284U_201201_044215/130352746/ccs	chr5	-	2719	20	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_6	47.232729625996	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAACATTTTCTTAAGA	NA	False	NA	NA	False	NA	NA	NA	114911556	114867930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
m54284U_201201_044215/130353729/ccs	chr11	+	1961	13	NIC	ENSMUSG00000020936.9	novel	4861	12	NA	NA	0	-2805	combination_of_known_junctions	TRUE	canonical	3	7	junction_1	279.278534799938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATATTCTAAATATCTTT	NA	False	NA	16	True	AATAAA	-22	NA	102919171	102956933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102919256_102919350_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
m54284U_201201_044215/130353859/ccs	chr15	-	2527	11	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	167.909618545216	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8083	False	NA	-4	True	AATAAA	-24	NA	79326273	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79303143_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
m54284U_201201_044215/130547793/ccs	chr2	+	5502	17	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	49.746702152002	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4625	False	NA	33	True	AATAAA	-25	NA	20524430	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20812712_20812836_20813520
m54284U_201201_044215/130549758/ccs	chr3	-	3031	11	NNC	ENSMUSG00000028020.17	novel	3029	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	12.2918672300021	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTCTTTACTGCTATG	NA	False	NA	-11	True	ATTAAA	-22	NA	80820921	80750905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_80752565_80757734_80757783_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
m54284U_201201_044215/130550462/ccs	chr4	-	1190	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_2	371.00008251278	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_148701302_148702022_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
m54284U_201201_044215/130615121/ccs	chr7	-	185	1	Intergenic	novelGene_3637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAAAGAAATCTGTA	NA	False	NA	-1	True	NA	NA	NA	6209578	6209393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_6209400_6209600
m54284U_201201_044215/130681106/ccs	chr5	+	2648	16	NNC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	46.5873611854355	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGTAGCTTAGTA	NA	False	NA	31	True	AATAAA	-21	NA	24599393	24614945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605798_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
m54284U_201201_044215/130744551/ccs	chr19	-	2184	9	NIC	ENSMUSG00000040913.12	novel	2068	9	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	23.8275051148877	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTCTTTGGTGGTTAG	NA	False	NA	-5	True	AATAAA	-18	NA	45648922	45566692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_45567365_45567559_45567647_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
m54284U_201201_044215/130746822/ccs	chr2	-	736	3	NNC	ENSMUSG00000075467.5	novel	2916	3	NA	NA	0	-2174	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	135.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACCGGGCCTGGGCTCCT	NA	False	NA	-23	True	AGTAAA	-16	NA	26242112	26240306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_26240571_26241346_26241491_26241784
m54284U_201201_044215/130810204/ccs	chr14	-	2034	5	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	698	junction_4	61.5726197266285	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168313	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_51165495_51166277_51166369_51166462_51167148_51167590_51167782_51168069
m54284U_201201_044215/130811005/ccs	chr11	-	1730	8	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	763	junction_7	32.5306762604036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	486	False	NA	-6	True	AATAAA	-16	NA	116029615	116022646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025943_116026016_116026152_116029267_116029448_116029536
m54284U_201201_044215/130875536/ccs	chr7	-	4678	9	NIC	ENSMUSG00000063511.12	novel	4008	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1192	junction_8	137.967330825091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9074	False	NA	-9	True	AATAAA	-16	NA	45045133	45025885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45026703_45026779_45026868_45030140_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
m54284U_201201_044215/130942498/ccs	chr2	+	2716	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	0	983	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	827.056025090836	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896606	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916796_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201201_044215/130943054/ccs	chr3	+	3892	23	NIC	ENSMUSG00000034349.15	novel	4316	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_3	206.330198532465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912302	68941956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_68912424_68913408_68913547_68914521_68914701_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
m54284U_201201_044215/131008107/ccs	chr14	-	4548	18	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	19486	2	-1038	0	3prime_fragment	FALSE	canonical	3	79	junction_16	26.924474658573	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	False	NA	-6	True	AATAAA	-14	NA	24208371	24184022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802
m54284U_201201_044215/131008502/ccs	chr2	-	1320	9	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	0	-659	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	112.790112044452	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30871953	30862847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871499_30871555_30871789
m54284U_201201_044215/131072806/ccs	chr2	-	5134	27	NIC	ENSMUSG00000009621.19	novel	5221	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_23	9.47466256756571	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTTAGCCTTCTGTG	NA	False	NA	-2	True	AATAAA	-19	NA	27317045	27152115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_27154224_27157241_27157397_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27169202_27169220_27171912_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
m54284U_201201_044215/131137937/ccs	chr8	-	2510	6	NIC	ENSMUSG00000025591.7	novel	3150	7	NA	NA	0	-2122	intron_retention	FALSE	canonical	3	740	junction_4	84.295670114188	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTATGTAAGAATTTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	66939173	66929103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66936823_66939063
m54284U_201201_044215/1311483/ccs	chr6	+	4572	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16097	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	19.3612854686872	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTTGACCAGTTGTG	4132	False	NA	5	True	ATTAAA	-16	NA	97933975	97998310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_97934147_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983083_97983159_97987355_97987432_97990629_97990778_97994734
m54284U_201201_044215/131204144/ccs	chr10	+	8388	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_4	94.4797988882236	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932760	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
m54284U_201201_044215/1312376/ccs	chr8	+	2141	9	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_1	931.234899206425	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTGTCCTTCTGTGAC	8293	False	NA	21	True	AATAAA	-22	NA	13209251	13225338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13209435_13215845_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
m54284U_201201_044215/131271181/ccs	chr10	-	172	1	Intergenic	novelGene_5526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAAACTAAGAAATTGG	NA	False	NA	NA	False	NA	NA	NA	102255453	102255281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_102255300_102255500
m54284U_201201_044215/131335733/ccs	chr6	-	2707	7	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	-28677	-1676	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_6	127.467207111825	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTGATATTGATGGA	NA	False	NA	-1	True	AATAAA	-17	NA	30272479	30212963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30272265
m54284U_201201_044215/131399903/ccs	chr6	-	7378	34	NNC	ENSMUSG00000007827.11	novel	6930	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_21	14.0305321010163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGAATCCTATATTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	118539187	118478268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118517270_118517396_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
m54284U_201201_044215/131466394/ccs	chr11	+	4395	22	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	209	junction_14	55.7045575552513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5272	False	NA	21	True	AATAAA	-21	NA	68906922	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
m54284U_201201_044215/131466656/ccs	chr18	+	173	1	Intergenic	novelGene_8862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAGAAACCCTAAG	NA	False	NA	NA	False	NA	NA	NA	34104736	34104909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_34104700_34104900
m54284U_201201_044215/131467849/ccs	chr11	-	3642	18	NIC	ENSMUSG00000020361.14	novel	4618	19	NA	NA	0	1308	intron_retention	FALSE	canonical	3	1487	junction_12	211.634796754295	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTTGTCAACTTTGTT	NA	False	NA	-42	True	ATTAAA	-18	NA	53191284	53152398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
m54284U_201201_044215/131532082/ccs	chr11	-	175	1	Intergenic	novelGene_6323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAGGTGTCGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	100289943	100289768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_100289800_100289900
m54284U_201201_044215/131532496/ccs	chr11	+	5577	26	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	0	0	intron_retention	FALSE	canonical	2	110	junction_1	80.4943327197636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599190	3640477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
m54284U_201201_044215/131596660/ccs	chr17	+	5585	13	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	73.5222471999689	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004421	29057518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
m54284U_201201_044215/131598479/ccs	chr7	+	824	5	NIC	ENSMUSG00000063179.14	novel	1135	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	59.6547357717726	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGATTTGGATAAATTT	NA	False	NA	22	True	ATTAAA	-22	NA	130972885	130989568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130973119_130975793_130975993_130985653_130985730_130986228_130986323_130989346
m54284U_201201_044215/131662066/ccs	chr1	-	10003	31	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	0	503	combination_of_known_junctions	TRUE	canonical	3	17	junction_28	16.8865495455867	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCTGATGTCTGTGCA	NA	False	NA	-9	True	AATAAA	-26	NA	135615843	135366082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
m54284U_201201_044215/131728782/ccs	chr11	-	3245	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	499.161136307706	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
m54284U_201201_044215/13173157/ccs	chr10	+	3210	1	NIC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	0	-28636	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAATTCCTGTTATG	NA	False	NA	NA	False	NA	NA	NA	75047904	75051114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_75047900_75051100
m54284U_201201_044215/13175043/ccs	chr16	-	6219	31	NIC	ENSMUSG00000064061.14	novel	3331	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	22.9540846038347	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTATTTCTTTATGTA	4421	False	NA	-9	True	AATAAA	-16	NA	48814304	48744596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
m54284U_201201_044215/131794064/ccs	chrX	+	3581	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1538	junction_13	90.6073523931271	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201201_044215/131794575/ccs	chr10	+	2305	7	NNC	ENSMUSG00000025373.15	novel	3283	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_4	45.9190108294545	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTATGCCCTTTCTTTGGC	226	False	NA	NA	False	AAGAAA	-38	NA	128247525	128275295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271438_128272336_128272473_128273176_128273281_128273951
m54284U_201201_044215/131858909/ccs	chr8	+	2184	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-2741	at_least_one_novel_splicesite	FALSE	canonical	3	882	junction_1	265.429369136123	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTGTTTATGAGTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	20016465	20043147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_20016689_20030550_20030757_20035860_20036160_20039783_20039904_20041811
m54284U_201201_044215/131859470/ccs	chr11	+	1163	6	NNC	ENSMUSG00000018666.14	novel	1251	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	188	junction_5	206.095705923243	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96698628
m54284U_201201_044215/131859927/ccs	chr4	+	4402	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	127.641037190239	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670924	149733356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
m54284U_201201_044215/131860075/ccs	chr9	-	3685	20	NIC	ENSMUSG00000032030.17	novel	5945	20	NA	NA	0	-124	combination_of_known_junctions	FALSE	canonical	3	18	junction_17	116.29602118274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGAGTTCTGTTTAGTT	NA	False	NA	-16	True	ATTAAA	-35	NA	53578807	53528447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53578337
m54284U_201201_044215/131861047/ccs	chr15	-	2563	15	NIC	ENSMUSG00000022557.12	novel	2491	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	559	junction_10	44.3286082592729	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTGGCAGCAGAGT	NA	False	NA	-34	True	AATAAA	-20	NA	76361477	76337188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
m54284U_201201_044215/131861095/ccs	chrX	-	181	1	Intergenic	novelGene_9613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGCATTTTCCCTTCAAA	NA	False	NA	NA	False	NA	NA	NA	111779588	111779407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_111779400_111779600
m54284U_201201_044215/131861308/ccs	chr2	-	2706	6	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_5	97.679885339818	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26276076_26276915_26277324_26277567_26277684_26279160
m54284U_201201_044215/131924229/ccs	chr7	-	3192	11	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	78.1811358321175	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9604	False	NA	87	True	NA	NA	NA	3218931	3204497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3213722_3214128_3218840
m54284U_201201_044215/131989945/ccs	chr9	-	1465	13	NIC	ENSMUSG00000032126.17	novel	1605	14	NA	NA	54	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	249.077004491917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGAGTCTGAGACCTT	1462	False	NA	-4	True	AATAAA	-20	NA	44255471	44247648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44253314_44253369_44255306
m54284U_201201_044215/131990654/ccs	chr7	+	3809	7	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	53.2679286458768	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTCGTTGTCTCATTA	NA	False	NA	NA	False	AGTAAA	-16	NA	106969996	107147860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_106970355_107024253_107024606_107035481_107036029_107101299_107101421_107103368_107103541_107105700_107105826_107145726
m54284U_201201_044215/132056159/ccs	chr19	+	3632	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	0	82	combination_of_known_junctions	FALSE	canonical	3	43	junction_3	89.3263678876512	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	18	True	AATAAA	-23	NA	10502629	10525099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509621_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
m54284U_201201_044215/132121973/ccs	chr11	-	2740	18	NIC	ENSMUSG00000020400.18	novel	2787	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_17	69.342188459451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	6841	False	NA	-5	True	CATAAA	-18	NA	54853742	54801612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54853658
m54284U_201201_044215/132180/ccs	chr2	-	189	1	Intergenic	novelGene_1088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	139961694	139961505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_139961500_139961700
m54284U_201201_044215/132186254/ccs	chr5	-	1912	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1073	junction_8	125.284675838668	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650206	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
m54284U_201201_044215/132188114/ccs	chr3	+	5141	23	NIC	ENSMUSG00000039831.17	novel	2503	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	3.57707346100895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCAGGTTCTTATGGC	NA	False	NA	25	True	GATAAA	-26	NA	121761477	121809803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_121761607_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
m54284U_201201_044215/132188305/ccs	chr7	-	2060	11	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_8	135.864785724631	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976622	125969238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125974238_125974376_125975845_125975912_125976008
m54284U_201201_044215/132188639/ccs	chr18	+	4309	24	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	247.264443671082	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
m54284U_201201_044215/132253176/ccs	chr7	-	2006	18	NIC	ENSMUSG00000036427.6	novel	2884	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	459.168460088979	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGGCTCAGCCTCTTC	NA	False	NA	-41	True	AATAAA	-16	NA	33929714	33901583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33901973_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
m54284U_201201_044215/132253760/ccs	chr19	+	1895	11	NNC	ENSMUSG00000010110.18	novel	2112	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	54.6512579910106	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTTGATGTCATTTCT	7024	False	NA	12	True	NA	NA	NA	8719251	8733006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_8719486_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
m54284U_201201_044215/132317580/ccs	chr3	+	177	1	Intergenic	novelGene_1695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCGACAGGAGTTTAAAATA	NA	False	NA	NA	False	NA	NA	NA	135474244	135474421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_135474200_135474400
m54284U_201201_044215/132384224/ccs	chr17	-	6997	1	Antisense	novelGene_ENSMUSG00000039218.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTTTTTGTTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	24039498	24032501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_24032500_24039500
m54284U_201201_044215/13238478/ccs	chr18	-	2948	9	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	65.9430388668887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
m54284U_201201_044215/132385255/ccs	chr17	+	2492	18	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	87.2084961417634	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9806	False	NA	11	True	AATAAA	-24	NA	34866184	34874048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869968_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
m54284U_201201_044215/13238550/ccs	chr3	-	2551	11	NIC	ENSMUSG00000089911.5	novel	2782	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	274.850213752873	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTGATCTGTGAGTCCC	NA	False	NA	-1	True	AATAAA	-36	NA	116456259	116424812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_116426130_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
m54284U_201201_044215/132515711/ccs	chr2	+	2769	15	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	0	1065	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	118.295461986209	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTGGTGTAATACTG	NA	False	NA	NA	False	AATAAA	-21	NA	69553197	69580957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_69553302_69561834_69561925_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
m54284U_201201_044215/132580585/ccs	chr7	+	5640	4	Fusion	ENSMUSG00000071952.4_ENSMUSG00000107181.2	novel	378	4	NA	NA	0	2807	multi-exon	FALSE	canonical	3	100	junction_3	9.20144916122817	189	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAATGTATTTGATG	NA	False	NA	-3	True	NA	NA	NA	42727474	42752074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_+_42727598_42741712_42741840_42742038_42742100_42746745
m54284U_201201_044215/132580641/ccs	chr17	-	4019	13	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_5	96.9641972872233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201201_044215/132581211/ccs	chr15	-	2998	9	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	0	-1399	intron_retention	FALSE	canonical	3	2074	junction_1	202.432704867568	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTTATTCTTTTCAGA	NA	False	NA	-8	True	AATAAA	-17	NA	10486033	10476263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_10476683_10476892_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
m54284U_201201_044215/132712242/ccs	chr15	+	182	1	Intergenic	novelGene_8017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTATTTGTAGCACA	NA	False	NA	NA	False	NA	NA	NA	103116789	103116971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_103116800_103117000
m54284U_201201_044215/132712756/ccs	chr14	+	2735	5	NNC	ENSMUSG00000041445.10	novel	519	5	NA	NA	-10437	-17195	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	2.38484800354236	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTCTGACTGCGTGTT	967	False	NA	12	True	AAAAAG	-37	NA	34086984	34102690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_34087676_34088315_34088446_34096485_34097736_34100831_34100981_34102175
m54284U_201201_044215/132907074/ccs	chr2	+	2645	15	NIC	ENSMUSG00000001855.16	novel	6605	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_14	34.0507574311153	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGTCC	NA	False	NA	NA	False	NA	NA	NA	31864447	31888709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31888214
m54284U_201201_044215/132907688/ccs	chr3	+	2203	2	NIC	ENSMUSG00000037211.13	novel	2481	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694095	37698747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_37694255_37696703
m54284U_201201_044215/132908687/ccs	chrX	-	189	1	Intergenic	novelGene_9467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCAAGGAGGGACACA	NA	False	NA	NA	False	NA	NA	NA	55386249	55386060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_55386100_55386200
m54284U_201201_044215/132908896/ccs	chr8	-	197	1	Intergenic	novelGene_4413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACTCTGATTAAAAAAA	9923	False	NA	NA	False	NA	NA	NA	95566414	95566217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_95566200_95566400
m54284U_201201_044215/132972936/ccs	chr2	-	3612	30	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	18.462418040573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGCAACCCTTCTC	NA	False	NA	-10	True	AATAAA	-18	NA	33020620	32876385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
m54284U_201201_044215/132972939/ccs	chr1	+	234	1	Intergenic	novelGene_441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCCAAGGAGGAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	164024522	164024756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_164024500_164024800
m54284U_201201_044215/13304364/ccs	chr17	+	248	1	Intergenic	novelGene_8479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTACATTTACGGCAT	NA	False	NA	NA	False	NA	NA	NA	29242782	29243030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29242800_29243000
m54284U_201201_044215/13305482/ccs	chr15	+	6536	30	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	75.1147833503137	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	391	False	NA	17	True	AATAAA	-17	NA	102204732	102232792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102204851_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
m54284U_201201_044215/133088/ccs	chr10	+	1117	4	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	6566	junction_3	484.21023900322	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662519	80665118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80662740_80664070_80664468_80664544_80664631_80664704
m54284U_201201_044215/133105989/ccs	chr14	+	2209	8	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2290	junction_4	160.750662549814	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296835	14303777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
m54284U_201201_044215/133106158/ccs	chr2	-	2855	14	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	227.17727613672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965543	124929661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
m54284U_201201_044215/133169265/ccs	chr2	+	174	1	Intergenic	novelGene_1146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGGGGGGGGGGG	6243	False	NA	NA	False	NA	NA	NA	154442710	154442884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154442700_154442900
m54284U_201201_044215/133300519/ccs	chr10	-	3292	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	142.960051723861	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	9981	False	NA	-46	True	AATAAA	-14	NA	80512127	80501160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
m54284U_201201_044215/133300980/ccs	chr15	-	3846	19	NNC	ENSMUSG00000033075.18	novel	3882	19	NA	NA	-4929	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_18	61.1035601395565	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	8149	False	NA	-4	True	AATAAA	-13	NA	97996554	97939112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97995703_97995839_97996468
m54284U_201201_044215/133367213/ccs	chrX	-	1319	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1072	junction_10	144.485579365652	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
m54284U_201201_044215/133367441/ccs	chr7	-	193	1	Intergenic	novelGene_3975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTTTGAATCAGGGTC	NA	False	NA	NA	False	NA	NA	NA	100333146	100332953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_100333000_100333100
m54284U_201201_044215/133373/ccs	chr16	-	386	1	Intergenic	novelGene_8033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAAATTGGTAAGATTTT	7765	False	NA	NA	False	NA	NA	NA	4711391	4711005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_4711000_4711400
m54284U_201201_044215/133432815/ccs	chr5	+	201	1	Intergenic	novelGene_2474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGTGTTTCCTTAATAAG	NA	False	NA	NA	False	NA	NA	NA	21111449	21111650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_21111400_21111600
m54284U_201201_044215/133564936/ccs	chr6	+	6184	25	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	72.2910782877113	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891355	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
m54284U_201201_044215/133630496/ccs	chr5	-	5704	32	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	1370	combination_of_known_junctions	FALSE	canonical	3	34	junction_29	112.134674493331	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563673	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563509
m54284U_201201_044215/133694796/ccs	chr4	+	3852	29	NNC	ENSMUSG00000036622.16	novel	3882	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	27.5084402632044	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1429	False	NA	12	True	AATAAA	-17	NA	140714210	140734641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721625_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
m54284U_201201_044215/13371012/ccs	chr4	-	1434	7	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_4	3779.60040877339	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119142305_119142340_119150938_119151003_119151400
m54284U_201201_044215/13371243/ccs	chr12	-	188	1	Intergenic	novelGene_6641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCATCACCAGTCCAGT	NA	False	NA	NA	False	NA	NA	NA	54747728	54747540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_54747500_54747700
m54284U_201201_044215/133761118/ccs	chr7	-	3806	5	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	163.518347594391	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGTTGTCTGTGTTT	NA	False	NA	-4	True	AATAAA	-16	NA	144493606	144483667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_144486575_144487752_144487902_144491030_144491191_144491623_144491840_144493232
m54284U_201201_044215/133761620/ccs	chr11	-	1388	8	NIC	ENSMUSG00000078812.11	novel	1437	7	NA	NA	79	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_6	10166.7414039854	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGTTGTTTA	6350	False	NA	-15	True	AATAAA	-20	NA	69812133	69807545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69810274_69810305_69811166_69811261_69811988
m54284U_201201_044215/133825717/ccs	chr6	-	2773	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	685	junction_1	70.5275753793429	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453669	142435974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_142436331_142438218_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
m54284U_201201_044215/133890474/ccs	chr4	+	2864	11	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	206.213699835874	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9698	False	NA	34	True	AATAAA	-20	NA	155648282	155675454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
m54284U_201201_044215/133891434/ccs	chr15	-	3661	8	NIC	ENSMUSG00000022195.8	novel	3966	9	NA	NA	0	231	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	109.959547292704	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTTAATTTTTTATT	NA	False	NA	-9	True	AATAAA	-14	NA	12824735	12808500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_12810931_12812018_12812159_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
m54284U_201201_044215/133892138/ccs	chr8	+	203	1	Intergenic	novelGene_4497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGGAGAAATTGCTTAA	3098	False	NA	NA	False	AATAAA	-16	NA	111917247	111917450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111917200_111917400
m54284U_201201_044215/133956512/ccs	chr2	+	188	1	Intergenic	novelGene_806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATTAGATAATG	1263	False	NA	NA	False	NA	NA	NA	59813290	59813478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_59813300_59813500
m54284U_201201_044215/133957454/ccs	chr15	-	210	1	Intergenic	novelGene_7832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAAACAAAACCA	NA	False	NA	NA	False	NA	NA	NA	81078722	81078512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81078500_81078700
m54284U_201201_044215/134022176/ccs	chr9	+	1606	3	NNC	ENSMUSG00000092622.9	novel	1681	3	NA	NA	-40	0	intron_retention	FALSE	canonical	3	24	junction_2	114.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGGTGTGTATTTGA	NA	False	NA	26	True	AATAAA	-13	NA	73009751	73011720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_73009958_73010111_73010292_73010500
m54284U_201201_044215/134152339/ccs	chr5	-	3616	30	NIC	ENSMUSG00000023079.15	novel	3524	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_12	58.3892999172587	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	134485570	134386516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
m54284U_201201_044215/134152541/ccs	chr8	-	1658	8	NIC	ENSMUSG00000031774.9	novel	828	9	NA	NA	0	713	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	220.053796762037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3861	False	NA	-8	True	AATAAA	-19	NA	95328354	95301571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328262
m54284U_201201_044215/134153852/ccs	chr8	+	2571	22	NNC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_19	91.1361643559501	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717245	85729978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729141_85729244_85729315_85729388_85729493
m54284U_201201_044215/134220455/ccs	chr2	+	2765	18	NIC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	0	-624	combination_of_known_splicesites	FALSE	canonical	3	36	junction_2	194.571999464924	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2812	False	NA	29	True	AATAAA	-28	NA	152690001	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_152690030_152696840_152696936_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
m54284U_201201_044215/134284343/ccs	chr11	+	4252	17	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_11	6.60462669270565	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGGATTTTTTGTCTT	1808	False	NA	NA	False	AATAAA	-32	NA	116809688	116877774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864258_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
m54284U_201201_044215/134286069/ccs	chr10	+	1214	4	NIC	ENSMUSG00000064030.16	novel	1158	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	137.41502424731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCAGGCTTTGGCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	128583757	128602433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128583868_128586151_128586207_128601015_128601110_128601478
m54284U_201201_044215/134350147/ccs	chr2	+	2089	13	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	51.5985437994351	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367171	180384073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
m54284U_201201_044215/13435393/ccs	chr6	-	194	1	Intergenic	novelGene_3553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAAGGTAAGAAGAGGA	7889	False	NA	NA	False	NA	NA	NA	135246454	135246260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_135246300_135246500
m54284U_201201_044215/13436354/ccs	chr11	+	3571	22	NIC	ENSMUSG00000025583.16	novel	6594	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_21	24.7230464333041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTTGCACATTATGG	2150	False	NA	NA	False	ATTAAA	-25	NA	119493820	119758215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119757979
m54284U_201201_044215/134546895/ccs	chrX	-	4187	1	Antisense	novelGene_ENSMUSG00000025626.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAACCATTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	52015612	52011425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chrX_-_52011400_52015600
m54284U_201201_044215/134547011/ccs	chr10	-	198	1	Intergenic	novelGene_5375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTTAAAAAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	67125754	67125556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_67125600_67125800
m54284U_201201_044215/134547365/ccs	chr5	-	3723	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	0	-1969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	229.676397350707	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996393	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956127_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
m54284U_201201_044215/134676692/ccs	chr11	-	2939	10	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	0	85	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	70.8071629214704	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174158	52143112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_52144813_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
m54284U_201201_044215/134679139/ccs	chr1	+	188	1	Intergenic	novelGene_475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAGAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	171092300	171092488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171092300_171092500
m54284U_201201_044215/134742543/ccs	chr3	-	4984	35	NIC	ENSMUSG00000033767.15	novel	5555	35	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_9	18.2667896888406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	False	NA	-26	True	AATAAA	-14	NA	83947468	83805515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820693_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
m54284U_201201_044215/134743290/ccs	chr16	-	7208	28	NIC	ENSMUSG00000002489.17	novel	7255	28	NA	NA	-101	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_25	13.3559478999909	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGACTTCCCTGTGCCTT	7745	False	NA	-1	True	AATAAA	-15	NA	89940758	89583998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_89586480_89589889_89590063_89591565_89591654_89594919_89595023_89595537_89595597_89596848_89596958_89601580_89601700_89601970_89602151_89606255_89606365_89608357_89608484_89608772_89608842_89609835_89610016_89618765_89618870_89629897_89630123_89634646_89634734_89640140_89640223_89646537_89646643_89652732_89652904_89655486_89655562_89657092_89657240_89662121_89662308_89664397_89664623_89673925_89674099_89681565_89682014_89694492_89695467_89752823_89752996_89863408_89863461_89940572
m54284U_201201_044215/134744351/ccs	chr13	+	222	1	Intergenic	novelGene_7275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTACTAAAAAAAAGAGTTAC	NA	False	NA	NA	False	NA	NA	NA	99967180	99967402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_99967200_99967400
m54284U_201201_044215/134807959/ccs	chr19	-	3479	7	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1340	junction_2	90.5704145954958	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTGTCTGGAACTTTGC	6524	False	NA	-2	True	AATAAA	-25	NA	4062708	4057501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4061273_4061345_4061429_4062550
m54284U_201201_044215/134808482/ccs	chr11	+	4247	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	intron_retention	FALSE	canonical	3	2360	junction_7	199.587069380481	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332180	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
m54284U_201201_044215/134808617/ccs	chr2	-	1740	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	143	combination_of_known_junctions	FALSE	canonical	3	25	junction_13	125.016069972941	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTATGTGGTCCATTA	NA	False	NA	-6	True	CATAAA	-19	NA	48839288	48795184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839105
m54284U_201201_044215/134808644/ccs	chr2	-	3496	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	96	junction_6	98.2966033096883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26278503_26278573_26278927
m54284U_201201_044215/134809118/ccs	chr7	+	956	7	ISM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	6347	0	6347	0	3prime_fragment	FALSE	canonical	3	79	junction_1	14.7384606462894	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGTTCTGCTTGCTTTC	NA	False	NA	9	True	AATAAA	-24	NA	24293314	24308350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
m54284U_201201_044215/134873732/ccs	chr12	+	6933	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	0	383	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	94.5879954798118	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGGTTGCTAAAGAATT	NA	False	NA	NA	False	ATTAAA	-23	NA	52550798	52616001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_52551171_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
m54284U_201201_044215/134940353/ccs	chr17	+	1204	6	NNC	ENSMUSG00000040771.15	novel	1135	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	404.287818268124	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	21	True	AATAAA	-29	NA	48717041	48724294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_48717266_48717852_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
m54284U_201201_044215/13503110/ccs	chr7	+	269	1	Intergenic	novelGene_3841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTTTTCTTTTGTTTTG	921	False	NA	NA	False	NA	NA	NA	45129965	45130234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_45130000_45130200
m54284U_201201_044215/135203590/ccs	chr11	-	235	1	Intergenic	novelGene_5994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTACCGTGTGAGGCC	104	False	NA	NA	False	NA	NA	NA	74770623	74770388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_74770400_74770600
m54284U_201201_044215/135267916/ccs	chr7	-	1896	1	FSM	ENSMUSG00002076377.1	ENSMUST00020182363.1	109	1	-1642	-145	-1642	145	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_45107400_45109300
m54284U_201201_044215/135333173/ccs	chr3	-	3149	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_30	18.8657243580933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843416	102725814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
m54284U_201201_044215/135333360/ccs	chr14	-	1295	11	NIC	ENSMUSG00000068758.9	novel	1614	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	9.8974744253269	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTGCTGCTATCAGT	NA	False	NA	1	True	AATAAA	-19	NA	8123345	8114269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8123250
m54284U_201201_044215/135333909/ccs	chr19	-	4002	29	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_28	133.329880907684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4365	False	NA	-8	True	AATAAA	-16	NA	6947128	6931080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943598_6946914
m54284U_201201_044215/135398500/ccs	chr12	-	5195	22	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.557951268816	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	4527182	4299440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_4299751_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
m54284U_201201_044215/135465103/ccs	chr15	+	2025	12	NIC	ENSMUSG00000022471.15	novel	2114	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	190.783291885872	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCACTTTTCAGTAT	NA	False	NA	29	True	AATAAA	-15	NA	81900569	81924286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81900677_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
m54284U_201201_044215/135528710/ccs	chr10	+	2020	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	64.5607465880004	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1369	False	NA	18	True	TATAAA	-21	NA	81104054	81109070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107225_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
m54284U_201201_044215/135528827/ccs	chr8	-	1587	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	70.9305215608125	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633351	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43593679_43593776_43594003_43594341_43595725_43595759_43633233
m54284U_201201_044215/135529993/ccs	chr16	+	944	6	NIC	ENSMUSG00000035376.11	novel	3598	7	NA	NA	0	-2633	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	561.414428029776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAGA	NA	False	NA	36	True	NA	NA	NA	34842799	34926914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_34843006_34846194_34846313_34895975_34896065_34920125_34920248_34922315_34922495_34926684
m54284U_201201_044215/135595313/ccs	chr10	-	3676	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	110.123371269731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	False	NA	1	True	AATAAA	-35	NA	62628065	62580240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
m54284U_201201_044215/135596760/ccs	chrX	+	2482	8	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_6	61.4664335143954	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326355	73333757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332626_73332710_73332789_73332904
m54284U_201201_044215/135661420/ccs	chr1	-	167	1	Antisense	novelGene_ENSMUSG00000026499.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCACATGCCTT	NA	False	NA	NA	False	NA	NA	NA	180559558	180559391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_180559400_180559600
m54284U_201201_044215/135662389/ccs	chr13	+	3175	17	NNC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	37.9588078546995	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5538	False	NA	8	True	AATAAA	-20	NA	51805776	51838080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51832918_51833768_51833990_51836035_51836191_51836479_51836670_51837313
m54284U_201201_044215/13568503/ccs	chr6	+	171	1	Intergenic	novelGene_3337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTGAAAACTGAGCCT	NA	False	NA	NA	False	NA	NA	NA	81202824	81202995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_81202800_81203000
m54284U_201201_044215/135725349/ccs	chr10	+	2394	12	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-119	0	combination_of_known_junctions	FALSE	canonical	3	537	junction_4	57.9097331204578	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTGGGCTTTACCA	NA	False	NA	17	True	GGGGCT	-44	NA	80458552	80476583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
m54284U_201201_044215/135726523/ccs	chr11	+	5409	17	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	40.9622062851844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93777032	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834487
m54284U_201201_044215/135727653/ccs	chr7	-	2910	12	NIC	ENSMUSG00000030986.14	novel	2955	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	105.850978984921	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133378532	133322670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133378330
m54284U_201201_044215/135727723/ccs	chr13	+	2781	4	NNC	ENSMUSG00000062382.10	novel	491	4	NA	NA	0	4381	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_3	24.2532930181083	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTTATTAGATATT	1247	False	NA	6	True	NA	NA	NA	74547812	74559846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_74547912_74553897_74554023_74554221_74554283_74557350
m54284U_201201_044215/135790803/ccs	chr12	+	3973	3	NNC	ENSMUSG00000079104.5	novel	1720	2	NA	NA	141	2286	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTATGTTTTGTTTGCT	NA	False	NA	16	True	ATTAAA	-20	NA	57277338	57288954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_57277398_57281366_57281475_57285148
m54284U_201201_044215/136053994/ccs	chr11	-	1791	13	NIC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_10	287.11354461258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687229	120680026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685728_120685838_120686302_120686550_120687044
m54284U_201201_044215/136055375/ccs	chr10	-	2964	21	NIC	ENSMUSG00000034917.9	novel	2901	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_20	33.8096140173176	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTATATTA	7840	False	NA	-13	True	AATAAA	-6	NA	81121615	81109061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81109224_81109482_81109530_81109636_81109904_81110216_81110318_81110413_81110625_81111007_81111079_81112101_81112198_81113029_81113245_81113652_81113900_81114457_81114567_81115028_81115186_81115338_81115406_81115727_81115790_81115916_81116026_81116239_81116400_81116599_81116704_81116938_81117267_81118771_81118875_81119329_81119440_81119516_81119574_81121434
m54284U_201201_044215/136183846/ccs	chr4	-	1517	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-263	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_6	652.166655801088	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGACACTTTCCTTT	NA	False	NA	-23	True	TATAAA	-28	NA	155170828	155158829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167588_155167775_155170661
m54284U_201201_044215/136183920/ccs	chr13	-	177	1	Intergenic	novelGene_7111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAAAAAAAAAACTGTAT	NA	False	NA	NA	False	NA	NA	NA	55855522	55855345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55855300_55855500
m54284U_201201_044215/136250893/ccs	chr18	+	3077	19	NIC	ENSMUSG00000041238.17	novel	781	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	44.3982051133146	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACTAAAATGTGGATG	3704	False	NA	9	True	ATTAAA	-31	NA	11790898	11875935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_11791031_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
m54284U_201201_044215/136251371/ccs	chr10	+	8409	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	0	at_least_one_novel_splicesite	FALSE	canonical	3	115	junction_4	106.070514666578	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932736	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
m54284U_201201_044215/13631649/ccs	chr2	-	3472	15	NIC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	59.708176379208	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCTATTCCAAATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	91540921	91504963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
m54284U_201201_044215/136317447/ccs	chr9	-	3289	20	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_19	185.150249685083	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043023	31000697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31041038_31041195_31042841
m54284U_201201_044215/136317671/ccs	chr9	+	4093	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.75407464324195	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCGTTCTTTGTTATT	NA	False	NA	NA	False	AATATA	-21	NA	99511594	99551309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
m54284U_201201_044215/13632011/ccs	chr11	+	2811	11	NIC	ENSMUSG00000010554.15	novel	2054	12	NA	NA	0	792	combination_of_known_junctions	FALSE	canonical	3	58	junction_5	139.204202522769	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTATTGATCCTGTTT	8494	False	NA	96	True	AATATA	-14	NA	74661655	74709512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686577_74686644_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
m54284U_201201_044215/13632673/ccs	chr6	+	2681	16	NIC	ENSMUSG00000004535.13	novel	3285	18	NA	NA	0	-292	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	160.973068831059	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTCTGTGAAATAATTCT	NA	False	NA	14	True	AATAAA	-16	NA	52690734	52743473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_52690841_52698282_52698452_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
m54284U_201201_044215/13632682/ccs	chr17	+	4737	21	NNC	ENSMUSG00000036918.17	novel	4614	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	20.231164079212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAGTGTCCAGTTACTT	NA	False	NA	13	True	AATAAA	-28	NA	87590313	87689197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_87590839_87597616_87597781_87600238_87600408_87601371_87601495_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
m54284U_201201_044215/136382959/ccs	chr14	+	2728	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	1681.11629579872	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGCCTTCTTGACCC	NA	False	NA	22	True	AATAAA	-18	NA	99536126	99552472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_99536659_99539440_99539691_99540853_99540914_99550586
m54284U_201201_044215/136446076/ccs	chr7	-	2834	12	NIC	ENSMUSG00000030986.14	novel	2998	12	NA	NA	123	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	130.335929602909	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTCAATGGGTTTCTTG	NA	False	NA	-9	True	AATAAA	-19	NA	133361875	133322670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350721_133361128_133361643_133361749
m54284U_201201_044215/136446501/ccs	chr3	-	1865	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19700	2	0	0	3prime_fragment	FALSE	canonical	3	87	junction_7	13.8524366087703	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAATCTGAGTGTGAGGC	NA	False	NA	NA	False	AATAAA	-21	NA	116388536	116374743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
m54284U_201201_044215/136579025/ccs	chr8	-	1892	14	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	981	junction_3	173.910063133712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
m54284U_201201_044215/136579349/ccs	chr6	-	322	1	FSM	ENSMUSG00000080921.5	ENSMUST00000117356.2	213	1	-44	-65	-44	65	mono-exon	FALSE	NA	NA	NA	NA	NA	810	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTACTTGCTGTCTTTTC	NA	False	NA	NA	False	ATTAAA	-39	NA	140692942	140692620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_140692600_140692900
m54284U_201201_044215/136709331/ccs	chr1	+	4251	23	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	53.173581335717	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201201_044215/136773764/ccs	chr11	+	1461	5	NIC	ENSMUSG00000018449.13	novel	548	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_3	128.657248144051	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAACTTTCCTGGAGATT	NA	False	NA	45	True	NA	NA	NA	70861332	70868659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70861414_70862589_70862761_70863840_70863902_70864894_70865867_70868483
m54284U_201201_044215/136775235/ccs	chr4	+	192	1	Intergenic	novelGene_2312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCAAAACAAACAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	141687850	141688042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141687800_141688000
m54284U_201201_044215/136776474/ccs	chr11	+	1373	4	NNC	ENSMUSG00000020519.6	novel	1151	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	255.160515928482	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCGGTCAGGAGGATTA	NA	False	NA	24	True	AATAAA	-24	NA	57692462	57701043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_57693116_57696869_57696993_57698849_57699171_57700767
m54284U_201201_044215/136972736/ccs	chr17	+	250	1	Intergenic	novelGene_8729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGGAAAGTGTTAGAA	6097	False	NA	NA	False	NA	NA	NA	75011912	75012162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_75011900_75012200
m54284U_201201_044215/136972757/ccs	chr8	+	209	1	Intergenic	novelGene_4309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCTCCAACCCAAGAAA	NA	False	NA	NA	False	NA	NA	NA	68510813	68511022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_68510800_68511000
m54284U_201201_044215/136973136/ccs	chr17	-	2330	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_4	249.749154152722	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063121	47046681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_47047835_47048100_47048776_47054111_47054209_47054310_47054369_47058346_47058471_47062898
m54284U_201201_044215/13698171/ccs	chr5	-	4310	10	NNC	ENSMUSG00000029640.18	novel	4327	9	NA	NA	120	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	113.432309722093	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGCTTATTTGTGCTTGT	1242	False	NA	NA	False	NA	NA	NA	146731696	146671648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146690399_146690533_146691179_146691410_146700010_146700225_146705746_146705828_146731424
m54284U_201201_044215/13699699/ccs	chr11	+	2317	11	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	336.48014800282	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1705	False	NA	18	True	ATTAAA	-15	NA	78403088	78413562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78403632_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
m54284U_201201_044215/137037136/ccs	chr4	-	5602	4	NIC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_3	178.068026951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGACTTGCTTGTTTT	NA	False	NA	-7	True	AATAAA	-16	NA	147726970	147696395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_147698506_147699736_147702956_147725368_147725463_147726791
m54284U_201201_044215/137101500/ccs	chr8	+	2621	11	NIC	ENSMUSG00000037134.18	novel	2781	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	49.1822122316595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTGTATGTAACATTAT	NA	False	NA	13	True	AATAAA	-18	NA	78276082	78307967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
m54284U_201201_044215/137103184/ccs	chr2	-	2492	13	NNC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	174.214965392376	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101393	25089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100852_25101113
m54284U_201201_044215/137104222/ccs	chr9	-	1660	12	NIC	ENSMUSG00000032316.9	novel	2496	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	91.1213884772205	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTGGTACCAGTGTGTC	9807	False	NA	-9	True	AATAAA	-21	NA	57672404	57657991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57668106_57668324_57668998_57669151_57672356
m54284U_201201_044215/137169652/ccs	chr6	-	1335	6	NIC	ENSMUSG00000057666.19	novel	1420	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6089	junction_1	1950.20942465162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCCTTGGTTTTAATGC	NA	False	NA	-15	True	AATAAA	-15	NA	125142566	125138815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_125139065_125139174_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
m54284U_201201_044215/137431505/ccs	chr3	-	187	1	Intergenic	novelGene_1496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGCCTCTCACCCAGG	4495	False	NA	NA	False	NA	NA	NA	88602839	88602652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88602700_88602800
m54284U_201201_044215/137431661/ccs	chr12	+	208	1	FSM	ENSMUSG00000021007.15	ENSMUST00000222378.2	1914	1	1734	-28	1734	28	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGGGTCACTCACTGAGA	NA	False	NA	NA	False	NA	NA	NA	98601002	98601210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_98601000_98601200
m54284U_201201_044215/137494851/ccs	chr10	+	169	1	Intergenic	novelGene_5431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAACACACACACACAG	NA	False	NA	NA	False	NA	NA	NA	77796531	77796700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_77796500_77796700
m54284U_201201_044215/137495616/ccs	chr7	+	2785	20	ISM	ENSMUSG00000006649.18	ENSMUST00000006825.9	4608	30	4100	0	4100	0	3prime_fragment	FALSE	canonical	2	12	junction_1	14.2015566233535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAAAAATTTCTGTT	NA	False	NA	NA	False	NA	NA	NA	30163249	30186648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_30163328_30164890_30165078_30165176_30165307_30165433_30165607_30166644_30166786_30166865_30167007_30167327_30167450_30170014_30170187_30170272_30170430_30170516_30170669_30173701_30173814_30173895_30174078_30177283_30177341_30180805_30180926_30181066_30181092_30181165_30181242_30181401_30181496_30181889_30182006_30186009_30186175_30186263
m54284U_201201_044215/137560230/ccs	chr5	+	5037	1	NIC	ENSMUSG00000029581.15	novel	2675	5	NA	NA	0	-5173	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACAACCTGAGGCTTT	NA	False	NA	NA	False	AAAACA	-6	NA	142946097	142951134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_142946100_142951100
m54284U_201201_044215/137562035/ccs	chr12	+	4254	20	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_1	448.159919023768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750974	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105751174_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
m54284U_201201_044215/137625650/ccs	chr1	-	1449	8	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	0	-112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	245.748087376036	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTGGCCTCATTTTCT	NA	False	NA	-13	True	TATAAA	-34	NA	134289717	134275531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
m54284U_201201_044215/137625894/ccs	chr9	-	3105	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	273	junction_15	379.318137102549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	0	True	ACTAAA	-20	NA	64080185	64044425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
m54284U_201201_044215/137626769/ccs	chr4	+	3724	10	NNC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	-187	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.5414365925061	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	18	True	AATAAA	-18	NA	63476830	63504594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_63476967_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
m54284U_201201_044215/137627054/ccs	chr6	-	2424	16	NIC	ENSMUSG00000029782.21	novel	3998	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	243.217652868098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGAAATGTGTGCAGAC	-1	True	NA	NA	False	AATATA	-24	NA	30509748	30480795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_30481137_30482594_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
m54284U_201201_044215/13762787/ccs	chr11	+	1593	2	Genic_Genomic	ENSMUSG00000078249.6	novel	1626	1	NA	NA	0	0	multi-exon	FALSE	canonical	3	1960	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTACAAGAGTCCTGCCT	NA	False	NA	NA	False	NA	NA	NA	120653619	120655245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_120653817_120653849
m54284U_201201_044215/13764221/ccs	chr19	-	173	1	Intergenic	novelGene_9298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAGAATTATTCT	NA	False	NA	NA	False	NA	NA	NA	45631754	45631581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45631600_45631800
m54284U_201201_044215/13764602/ccs	chr11	-	3443	22	NIC	ENSMUSG00000020439.18	novel	3386	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_20	24.580101828424	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTTTTCTCTGCTG	8137	False	NA	-6	True	GATAAA	-17	NA	3489292	3467522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487635_3487744_3489111
m54284U_201201_044215/137691693/ccs	chr9	-	3366	14	NIC	ENSMUSG00000032120.12	novel	4337	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	10.0701680236066	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGTGGCTGGTTATCCT	5315	False	NA	NA	False	TATAAA	-1	NA	44231582	44221507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44222565_44224802_44225089_44225174_44225312_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
m54284U_201201_044215/137691828/ccs	chr10	-	5310	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	335	junction_11	31.9479976870698	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
m54284U_201201_044215/137692527/ccs	chr3	+	6275	29	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_13	93.6695232817843	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808254	35910425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863666_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
m54284U_201201_044215/1377520/ccs	chr7	-	147	1	Intergenic	novelGene_4060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAATCTTAAGGATTTCA	NA	False	NA	NA	False	NA	NA	NA	120441916	120441769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_120441800_120441900
m54284U_201201_044215/137756969/ccs	chr11	-	2395	14	NNC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	235	junction_13	1064.58200258913	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9265	False	NA	-9	True	AATAAA	-45	NA	106679709	106672373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679607
m54284U_201201_044215/137757829/ccs	chr2	-	176	1	Intergenic	novelGene_868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAACCCTGGA	NA	False	NA	NA	False	NA	NA	NA	75399642	75399466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_75399500_75399600
m54284U_201201_044215/137758589/ccs	chr6	-	4900	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	20.7879505697144	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797660	148743989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148746175_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
m54284U_201201_044215/137822350/ccs	chr13	-	1890	15	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	308	junction_9	2311.64692152498	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5157	False	NA	-5	True	AATAAA	-14	NA	58549924	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
m54284U_201201_044215/137823853/ccs	chr5	-	186	1	Intergenic	novelGene_3061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACCGAAAATTTAAAGG	NA	False	NA	NA	False	NA	NA	NA	144710623	144710437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_144710400_144710600
m54284U_201201_044215/137824434/ccs	chr11	+	1770	15	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	65.7627538650745	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323462	70331500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70323580_70326341_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
m54284U_201201_044215/137824547/ccs	chr14	+	3959	13	NNC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	110.564052576876	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438743	59474714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_59439034_59443073_59443197_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
m54284U_201201_044215/137889350/ccs	chr4	-	720	5	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	170	junction_2	2381.02061887334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994325	150981589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_150981929_150985464_150985552_150991496_150991599_150992774_150992881_150994239
m54284U_201201_044215/137889445/ccs	chr4	-	3865	20	NIC	ENSMUSG00000040359.15	novel	4316	19	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	78	junction_1	36.6180404503927	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTTATACAGTCTAT	-6	True	NA	-10	True	AATAAA	-19	NA	25281821	25248599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_25249970_25250425_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
m54284U_201201_044215/1379062/ccs	chr14	+	1235	8	NNC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	19461	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	209.063900005989	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122514913	122639646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_122514996_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
m54284U_201201_044215/137953283/ccs	chr16	-	157	2	Intergenic	novelGene_8027	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	77	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	2414	False	NA	NA	False	NA	NA	NA	4001375	3759070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_3759179_4001326
m54284U_201201_044215/137953701/ccs	chrX	+	4055	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_23	265.342095255903	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139949_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201201_044215/137956163/ccs	chr7	+	3627	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_15	69.6971225294767	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	103	False	NA	20	True	ATTAAA	-20	NA	4140058	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
m54284U_201201_044215/138020717/ccs	chr16	+	2573	10	NIC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	690.354516190552	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
m54284U_201201_044215/138021478/ccs	chr7	-	214	1	Intergenic	novelGene_4026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCGAGTACCTGGGATG	NA	False	NA	NA	False	NA	NA	NA	110220863	110220649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_110220600_110220900
m54284U_201201_044215/138150222/ccs	chr8	-	4226	14	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	0	-2004	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	31.6824107026122	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACACCTTCTTGTGATT	NA	False	NA	-6	True	GATAAA	-30	NA	41586763	41446092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586697
m54284U_201201_044215/138151174/ccs	chr13	-	1951	16	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_15	1947.55862442073	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
m54284U_201201_044215/138151831/ccs	chr9	+	4548	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_5	122.664746361781	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6853	False	NA	17	True	AATAAA	-17	NA	107879832	107925981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922222_107922661
m54284U_201201_044215/138217332/ccs	chr11	-	2329	1	Intergenic	novelGene_6143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4457	False	NA	NA	False	NA	NA	NA	85135498	85133169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_85133200_85135500
m54284U_201201_044215/138281990/ccs	chr11	+	1083	5	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	0	-185	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	2227.98401026578	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTATGTCATCTTTTT	439	False	NA	13	True	ATTAAA	-16	NA	52122863	52137500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_52122946_52127663_52127761_52133413_52133488_52135807_52135949_52136811
m54284U_201201_044215/138283714/ccs	chr2	+	2711	6	NIC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	-177	0	intron_retention	FALSE	canonical	2	13	junction_2	4.8	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTTGCTGAGTT	NA	False	NA	NA	False	TATAAA	-20	NA	31344542	31350750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31349220_31350061
m54284U_201201_044215/138346977/ccs	chr3	+	5134	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	253	junction_5	45.155813579206	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243617	88269645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
m54284U_201201_044215/138349046/ccs	chr16	+	5143	19	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	103.023085630549	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8020	False	NA	14	True	AATAAA	-15	NA	32427800	32451608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_32428175_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
m54284U_201201_044215/138412133/ccs	chr3	-	171	1	Intergenic	novelGene_1686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAACCTCTCCATA	NA	False	NA	NA	False	NA	NA	NA	130673824	130673653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_130673700_130673800
m54284U_201201_044215/138414044/ccs	chr9	-	2763	14	NIC	ENSMUSG00000032312.8	novel	2162	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	41.3604447574315	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCTCGGCGCTTCCT	NA	False	NA	-26	True	AATAAA	-22	NA	57552900	57533929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277_57541329_57552277
m54284U_201201_044215/138477598/ccs	chr2	-	176	1	Intergenic	novelGene_679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACCAAAAGAATAA	NA	False	NA	NA	False	NA	NA	NA	30069076	30068900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_30068900_30069100
m54284U_201201_044215/138479194/ccs	chr8	+	2859	3	NIC	ENSMUSG00000066880.16	novel	2920	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	30	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	False	NA	29	True	AATAAA	-17	NA	72676695	72688473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_72676817_72682045_72682173_72685862
m54284U_201201_044215/138545163/ccs	chr12	+	201	1	Intergenic	novelGene_6637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAATAAATCCAA	NA	False	NA	NA	False	NA	NA	NA	54527172	54527373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_54527200_54527400
m54284U_201201_044215/138545449/ccs	chr11	-	984	4	NIC	ENSMUSG00000032892.15	novel	820	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	482	junction_2	50.8876758710354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCTGTGCCTTCAAAT	7236	False	NA	-5	True	AATAAA	-19	NA	68864669	68863312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_68863568_68863768_68863855_68863942_68864384_68864467
m54284U_201201_044215/138610326/ccs	chr12	-	187	1	Intergenic	novelGene_6760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGGAGACAGAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	80563039	80562852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80562900_80563000
m54284U_201201_044215/138610844/ccs	chr13	-	3222	18	NIC	ENSMUSG00000021451.17	novel	1249	5	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_2	67.7604165309136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCTCTAGGTCTTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	51947783	51839564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_51840283_51841318_51841417_51845324_51845535_51858988_51859033_51859108_51859282_51862910_51863027_51863947_51864171_51865235_51865393_51865484_51865661_51866714_51866867_51867727_51867842_51868829_51868924_51874541_51874641_51876353_51876417_51877578_51877725_51879259_51879579_51917287_51917357_51947532
m54284U_201201_044215/138674300/ccs	chr19	-	286	1	Intergenic	novelGene_9123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCCATGGCATAGGGCA	NA	False	NA	NA	False	NA	NA	NA	6445594	6445308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_6445300_6445600
m54284U_201201_044215/138674309/ccs	chr2	-	2233	15	NNC	ENSMUSG00000027423.16	novel	2512	14	NA	NA	0	-410	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_12	475.51864273847	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATATGGAGTGCTTTTGTA	NA	False	NA	-21	True	AATAAA	-15	NA	144112826	144092452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144111381_144111513_144112296_144112380_144112620
m54284U_201201_044215/138674506/ccs	chr7	-	3747	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_19	1345.03087232227	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
m54284U_201201_044215/138676427/ccs	chr8	-	2512	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	2134.61483645177	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760017	43748103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43759201_43759877
m54284U_201201_044215/138676974/ccs	chr4	+	2659	10	NIC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	284.418488399066	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9698	False	NA	34	True	AATAAA	-20	NA	155648282	155675454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155648437_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155673066_155673150_155673784
m54284U_201201_044215/138677048/ccs	chr3	-	4091	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_3	285.127084089942	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3507	False	NA	99	True	AAAAAG	-18	NA	89959822	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/138739923/ccs	chr8	+	2891	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	49	junction_7	8.53811503108407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACATTGTCTCTTTCCC	NA	False	NA	18	True	NA	NA	NA	124059451	124096254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_124059760_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
m54284U_201201_044215/138741873/ccs	chr17	+	1568	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_1	920.681899463653	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	False	NA	37	True	AATGAA	-26	NA	35460753	35472683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35460829_35462222_35462427_35463116_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
m54284U_201201_044215/138742445/ccs	chr10	-	1795	11	NIC	ENSMUSG00000034758.13	novel	2015	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	15.7445228571716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433201	81426738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81433129
m54284U_201201_044215/138807595/ccs	chr13	-	3912	12	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	-86	intron_retention	FALSE	canonical	3	2035	junction_5	147.48929082849	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334865	97312924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97327787_97330629_97330776_97334533
m54284U_201201_044215/138870968/ccs	chr17	-	764	7	NIC	ENSMUSG00000024099.16	novel	927	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	95	junction_6	1501.12899179251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	5516	False	NA	-11	True	AATAAA	-15	NA	66408490	66386435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66408409
m54284U_201201_044215/138871715/ccs	chr16	+	8599	4	NNC	ENSMUSG00000034158.10	novel	8604	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	66.9145391940762	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCTTGGTCCGGTCAT	NA	False	NA	22	True	AATAAA	-22	NA	37688750	37709220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_37689343_37697415_37697540_37698648_37698927_37701615
m54284U_201201_044215/138873076/ccs	chr6	+	4827	23	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_22	93.5517821872637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1727	False	NA	28	True	AATAAA	-30	NA	65019592	65093045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_65019715_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65091284
m54284U_201201_044215/13893646/ccs	chr4	-	1532	10	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	73.7735942588982	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952980	147945247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
m54284U_201201_044215/138938583/ccs	chr17	+	172	1	Intergenic	novelGene_8667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58080190	58080362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_58080200_58080400
m54284U_201201_044215/138938751/ccs	chr5	-	4543	15	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1728	junction_3	192.75141281676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959357	122925793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
m54284U_201201_044215/138939105/ccs	chr11	-	1442	11	NIC	ENSMUSG00000018677.10	novel	1564	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_8	1436.33615842532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7726	False	NA	95	True	NA	NA	NA	102298332	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297187_102297248_102297380_102297481_102298215
m54284U_201201_044215/13893928/ccs	chr1	-	1847	2	ISM	ENSMUSG00000026082.12	ENSMUST00000194650.6	3576	18	27516	4629	-2911	-903	internal_fragment	FALSE	canonical	3	180	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGTATCACTGCGTTCC	7133	False	NA	NA	False	TTTAAA	-33	NA	38099697	38096505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_38096858_38098202
m54284U_201201_044215/13895242/ccs	chr1	-	7180	25	NIC	ENSMUSG00000033364.14	novel	7111	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_23	24.5588861491903	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74544965	74474669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
m54284U_201201_044215/13895874/ccs	chr15	+	2583	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	67.2724330384562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	8	True	AATAAA	-15	NA	84921325	84947031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84944289_84944391_84945732
m54284U_201201_044215/139003099/ccs	chr19	+	3218	12	NIC	ENSMUSG00000024949.18	novel	3221	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_2	340.283668733325	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414149_6415693_6415823_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
m54284U_201201_044215/139003838/ccs	chr15	-	5717	5	NIC	ENSMUSG00000053411.17	novel	663	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	258	junction_4	92.290302849216	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79855069
m54284U_201201_044215/139067706/ccs	chr5	+	2416	11	NIC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_5	71.8476861144463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	-4	True	NA	6	True	AATAAA	-22	NA	120649232	120672089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120670924
m54284U_201201_044215/139135392/ccs	chr4	+	131	1	Intergenic	novelGene_2083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAACTCCAACTAT	NA	False	NA	NA	False	NA	NA	NA	123148825	123148956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_123148800_123149000
m54284U_201201_044215/139135458/ccs	chr6	-	178	1	Intergenic	novelGene_3391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	91852017	91851839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_91851800_91852000
m54284U_201201_044215/139135774/ccs	chr17	+	3487	16	NIC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	638	junction_1	460.234210906674	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201201_044215/139199159/ccs	chr5	-	187	1	Intergenic	novelGene_3049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTTTTGCCTTAAAATC	4416	False	NA	NA	False	NA	NA	NA	143502180	143501993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_143502000_143502200
m54284U_201201_044215/139200331/ccs	chr11	-	203	1	Intergenic	novelGene_6229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGAAAGTGACGTGTCA	NA	False	NA	NA	False	NA	NA	NA	95540856	95540653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95540700_95540900
m54284U_201201_044215/139264137/ccs	chr2	+	200	1	Intergenic	novelGene_1098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATCTGAAATGCCCTCC	NA	False	NA	NA	False	NA	NA	NA	144093991	144094191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_144094000_144094200
m54284U_201201_044215/139332056/ccs	chrX	+	2313	16	NIC	ENSMUSG00000001127.13	novel	2358	16	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	1	12	junction_13	103.468642592816	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	6294	False	NA	23	True	NA	NA	NA	20714802	20726758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20725004_20725113_20725923_20726059_20726217
m54284U_201201_044215/139395169/ccs	chr6	+	2703	15	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_4	344.10840870106	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808316	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201201_044215/139395322/ccs	chr14	+	4760	25	NNC	ENSMUSG00000021945.10	novel	6974	24	NA	NA	193	0	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	35.7067531739057	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTGTTTGTTTGT	NA	False	NA	21	True	AATAAA	-17	NA	57124302	57197809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_57124414_57125251_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
m54284U_201201_044215/139396598/ccs	chr15	+	4889	8	NNC	ENSMUSG00000016619.11	novel	4766	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	156.443900096971	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTGGGTACTGTTCTGTT	NA	False	NA	19	True	AATAAA	-19	NA	84807611	84827164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_84807852_84811568_84811771_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
m54284U_201201_044215/139461917/ccs	chr5	-	3697	31	NIC	ENSMUSG00000023079.15	novel	3572	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	64.2361009609602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAGCGTCACTTTTTT	NA	False	NA	NA	False	AGTAAA	-14	NA	134485570	134386516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411540_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
m54284U_201201_044215/139526421/ccs	chr9	+	4040	23	NIC	ENSMUSG00000032267.9	novel	4109	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_12	175.933525434753	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCCTTTTTGAAAT	NA	False	NA	20	True	AATAAA	-26	NA	48896684	48953817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
m54284U_201201_044215/13961688/ccs	chr9	+	2341	12	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	6719.82049765179	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1872	False	NA	20	True	AATAAA	-20	NA	59563858	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59563933_59570322_59570440_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201201_044215/139657350/ccs	chr17	-	4010	11	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	426	junction_6	73.9821600117217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTTGTTTTT	NA	False	NA	-10	True	AATAAA	-13	NA	32540159	32523666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536853_32537744_32537784_32540058
m54284U_201201_044215/139660064/ccs	chr6	-	211	1	Intergenic	novelGene_3320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTACTTTTTAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	71541100	71540889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_71540900_71541100
m54284U_201201_044215/139788542/ccs	chr10	-	1331	9	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	72.0017360901805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9889	False	NA	-11	True	AATAAA	-25	NA	81463400	81457620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81457913_81458241_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
m54284U_201201_044215/139853944/ccs	chr7	-	2993	18	NIC	ENSMUSG00000025474.10	novel	2960	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_17	103.694086947232	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGCTCAATGATTTC	NA	False	NA	NA	False	NA	NA	NA	139616245	139575867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616082
m54284U_201201_044215/139853978/ccs	chr8	-	2378	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	862.759139814429	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTACTTGGCTTCACTGG	NA	False	NA	-12	True	AATAAA	-19	NA	26337722	26306903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329958_26330039_26330104_26337606
m54284U_201201_044215/139856060/ccs	chr15	+	2775	13	ISM	ENSMUSG00000036661.15	ENSMUST00000173292.8	5172	24	-112	24149	0	-9762	5prime_fragment	FALSE	canonical	3	9	junction_4	5.63409758129512	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTTGTATACAATATGA	NA	False	NA	NA	False	NA	NA	NA	73384408	73419799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_73384697_73394078_73394356_73395287_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73412541_73412698_73414568_73414666_73416206_73416311_73416794_73416995_73418969
m54284U_201201_044215/139920693/ccs	chr5	+	2412	12	NIC	ENSMUSG00000029179.15	novel	2485	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_5	31.3840513268436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCAGTTGTTATTCC	NA	False	NA	21	True	ATTAAA	-17	NA	52940395	52982007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
m54284U_201201_044215/139921063/ccs	chr11	+	1957	4	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	111.645271582216	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575272	113585473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_113575538_113578599_113580048_113583220_113583329_113585337
m54284U_201201_044215/139921577/ccs	chr11	-	2224	3	Intergenic	novelGene_6091	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	36.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATTTATTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	79867139	79863317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79863780_79864424_79865963_79866915
m54284U_201201_044215/139986871/ccs	chr6	+	2101	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	148	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	2043.38091298601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684674	122691592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_122684931_122688496_122688763_122689587_122689675_122690100
m54284U_201201_044215/139987727/ccs	chr16	-	3115	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	59.9737718155622	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201201_044215/140051473/ccs	chr17	+	3686	5	NIC	ENSMUSG00000023908.9	novel	2902	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	451	junction_4	39.6925685739787	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_23945616_23951310_23954347_23954536_23954695_23955297_23955376_23955468
m54284U_201201_044215/140052667/ccs	chr9	+	2925	13	NNC	ENSMUSG00000032307.17	novel	3456	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	237.121276987115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	10	True	AATAAA	-18	NA	55056678	55114813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087908_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
m54284U_201201_044215/140053013/ccs	chr6	-	2405	8	ISM	ENSMUSG00000008153.13	ENSMUST00000112523.8	3703	18	12572	0	0	0	3prime_fragment	FALSE	canonical	3	22	junction_7	10.5211157940126	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTGCTTGCTGTTTACC	9253	False	NA	NA	False	AATAAA	-15	NA	124427131	124407717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_124408692_124408916_124409120_124413776_124413913_124414333_124414480_124415228_124415400_124415717_124415945_124426448_124426598_124426732
m54284U_201201_044215/140053295/ccs	chr13	-	1035	8	NNC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	323	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	192.402639041683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36089988	36080686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36089945
m54284U_201201_044215/140117572/ccs	chr14	-	3102	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	0	1199	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	95.1609656056516	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATGATTTTTAAAG	NA	False	NA	-16	True	AATAAA	-9	NA	21102576	21084882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102522
m54284U_201201_044215/140118478/ccs	chr19	+	1349	5	NIC	ENSMUSG00000023307.15	novel	1809	6	NA	NA	0	-155	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	293.769467440032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACGCCTCTTTTGTAT	NA	False	NA	22	True	ATTAAA	-16	NA	37184941	37199221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_37185304_37188069_37188273_37197701_37197886_37198037_37198205_37198788
m54284U_201201_044215/14024841/ccs	chr2	-	226	1	Intergenic	novelGene_1237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAACACAAGCTGAGCT	NA	False	NA	NA	False	AAAAAG	-27	NA	166722459	166722233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166722200_166722500
m54284U_201201_044215/14025127/ccs	chr5	+	3002	9	NIC	ENSMUSG00000029186.13	novel	3139	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	45.8023948609677	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCATTGTTCTGTGTATT	NA	False	NA	7	True	AATAAA	-16	NA	52898915	52926682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_52899311_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
m54284U_201201_044215/140378342/ccs	chr10	+	1759	7	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	238.087285581477	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80438784_80444636_80444685_80445163_80445259_80445474_80445632_80446861_80446964_80448175_80448294_80450437
m54284U_201201_044215/140378851/ccs	chr15	-	3632	16	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	0	-418	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	14.0437411919569	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419135	102407877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102419018
m54284U_201201_044215/140444977/ccs	chr6	-	3071	20	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	192.331489002841	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	7856	False	NA	-27	True	AATACA	-9	NA	124806447	124792000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801611_124801814_124801949_124802074_124802142_124803261_124803388_124806247
m54284U_201201_044215/140445484/ccs	chr8	+	3981	21	NIC	ENSMUSG00000038604.10	novel	4108	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	20.6815739246316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTTCCTACATGGCTT	2642	False	NA	7	True	NA	NA	NA	106331886	106348851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106331983_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
m54284U_201201_044215/140446176/ccs	chr7	-	198	1	Intergenic	novelGene_4009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCAGCTTCCATATAT	NA	False	NA	NA	False	NA	NA	NA	109260096	109259898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_109259900_109260100
m54284U_201201_044215/140509595/ccs	chr15	+	3244	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	39.2925061769629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192967	99214899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
m54284U_201201_044215/140576395/ccs	chr2	-	3523	19	NNC	ENSMUSG00000042272.18	novel	8990	18	NA	NA	-233	480	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_18	32.5521898146407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTATGTTTGTATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	77111169	77016418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019_77096110_77110898
m54284U_201201_044215/140642057/ccs	chr7	+	3416	2	NIC	ENSMUSG00000074406.6	novel	3523	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGGTTTTGTTTTCATG	2971	False	NA	8	True	AATAAA	-14	NA	4918215	4925001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4918405_4921774
m54284U_201201_044215/140642249/ccs	chr1	+	3796	23	Fusion	ENSMUSG00000098926.3_ENSMUSG00000026496.12	novel	476	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_1	463.907532108617	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGTGTTGTGTGCCTCA	3444	False	NA	10	True	ATTAAA	-18	NA	180396790	180428819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr1_+_180396939_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
m54284U_201201_044215/140705975/ccs	chr17	-	2363	6	NIC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	0	282	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	104.148739790744	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGAGACTGGAAAAAAA	NA	False	NA	-1	True	TTTAAA	-8	NA	37300429	37294670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299396_37299673_37299826_37300097_37300320
m54284U_201201_044215/140772093/ccs	chr9	+	4685	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	100	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	84.1145316688491	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108367900	108378898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
m54284U_201201_044215/140772643/ccs	chr2	-	1254	9	NNC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	0	-659	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	113.962438987589	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30872213	30862847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30872120
m54284U_201201_044215/140838324/ccs	chr10	+	219	1	Antisense	novelGene_ENSMUSG00000025357.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACAGTTCCTGAACTGAC	NA	False	NA	NA	False	NA	NA	NA	128566697	128566916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_128566700_128566900
m54284U_201201_044215/140838518/ccs	chr1	-	5789	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	74.1391504966413	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778397	152712746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
m54284U_201201_044215/140839089/ccs	chr7	-	3203	24	NNC	ENSMUSG00000060279.15	novel	3449	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	188.587887480474	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACCCCAGCTATTGA	NA	False	NA	-14	True	AATAAA	-13	NA	44578920	44549808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_44549977_44550144_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551139_44552172_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
m54284U_201201_044215/14090973/ccs	chr16	-	508	5	ISM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	671	0	0	0	3prime_fragment	FALSE	canonical	3	198	junction_4	3188.04854103572	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631720	84624758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696
m54284U_201201_044215/141033747/ccs	chr15	-	5535	35	NIC	ENSMUSG00000022568.18	novel	5545	37	NA	NA	0	0	intron_retention	FALSE	canonical	3	271	junction_29	51.9359217247362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941633	75919006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
m54284U_201201_044215/141035821/ccs	chr5	+	104	1	Intergenic	novelGene_2666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2693	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAATACAAGCTGGGTG	NA	False	NA	NA	False	NA	NA	NA	92259206	92259310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92259200_92259300
m54284U_201201_044215/141036280/ccs	chr5	-	561	2	Antisense	novelGene_ENSMUSG00000107300.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGGTGTGCACTTTATG	NA	False	NA	NA	False	CATAAA	-18	NA	66847294	66844953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_66845383_66847162
m54284U_201201_044215/141036316/ccs	chr4	+	785	2	Intergenic	novelGene_2163	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	5414	False	NA	NA	False	NA	NA	NA	129777969	129779200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129778259_129778704
m54284U_201201_044215/141100532/ccs	chr6	-	3277	11	NNC	ENSMUSG00000038784.14	novel	3473	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	67.4943701355898	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGGGTGAGTCTTGTTC	7646	False	NA	-2	True	AATAAA	-20	NA	35110659	34998999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35029839_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
m54284U_201201_044215/141101851/ccs	chr6	+	2811	10	NIC	ENSMUSG00000038346.19	novel	3132	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	42.3661290288467	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTGATGTTTTAT	NA	False	NA	6	True	TATAAA	-18	NA	124986200	125014600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
m54284U_201201_044215/141165784/ccs	chr4	+	6255	6	NIC	ENSMUSG00000037692.15	novel	5898	6	NA	NA	-59	0	intron_retention	FALSE	canonical	3	39	junction_1	32.2204903749152	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	132766744	132804956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_132767098_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
m54284U_201201_044215/141165881/ccs	chr4	+	4324	17	NNC	ENSMUSG00000028274.18	novel	4157	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_3	92.7669922103223	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTTCCTGTCTCG	-19	True	NA	11	True	AATAAA	-18	NA	33310327	33502614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_33310525_33320518_33320629_33323654_33323839_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
m54284U_201201_044215/141166356/ccs	chr12	-	3084	18	NIC	ENSMUSG00000020974.7	novel	1706	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	369	junction_1	35.1647629543158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTACACATTGTAGTTT	NA	False	NA	-5	True	AATAAA	-20	NA	69274969	69248546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
m54284U_201201_044215/141166926/ccs	chr2	-	194	1	Intergenic	novelGene_1132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAATGCAGACCTGTGG	NA	False	NA	NA	False	NA	NA	NA	153142839	153142645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_153142600_153142800
m54284U_201201_044215/141232900/ccs	chr11	+	3481	8	NIC	ENSMUSG00000020402.12	novel	2022	9	NA	NA	-52	0	intron_retention	FALSE	canonical	3	3003	junction_1	204.751716247074	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTGTTTTTGTTA	5354	False	NA	30	True	AATAAA	-26	NA	52251909	52280224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52278301_52279258
m54284U_201201_044215/141297966/ccs	chr19	+	4485	16	NIC	ENSMUSG00000025026.16	novel	4054	15	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	73.0349687934942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGGTATAATGGGGT	2523	False	NA	8	True	AATAAA	-17	NA	53131226	53235518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_53131521_53147810_53148064_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
m54284U_201201_044215/141363122/ccs	chr7	-	4326	22	NIC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_20	75.5646319745036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTACTGATATTATT	NA	False	NA	-7	True	TATAAA	-19	NA	79115946	79099129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79114351_79115120_79115817
m54284U_201201_044215/141426984/ccs	chr3	-	3476	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	289	junction_17	212.482304204374	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/141559501/ccs	chr14	-	2492	6	ISM	ENSMUSG00000021782.15	ENSMUST00000042009.13	6336	27	33207	2	1606	0	3prime_fragment	FALSE	canonical	3	145	junction_4	6.05309838016862	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	False	NA	-6	True	AATAAA	-14	NA	24194650	24184022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369
m54284U_201201_044215/141559585/ccs	chr13	-	7034	39	NIC	ENSMUSG00000021375.12	novel	6866	38	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_28	14.9840404478914	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAAAGTGTTGATCGTC	NA	False	NA	-6	True	AATACA	-16	NA	47083265	46902570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_46904103_46905556_46906349_46914138_46914244_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47018294_47018308_47082691_47082783_47083042
m54284U_201201_044215/141623725/ccs	chr2	+	3513	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	956	junction_8	74.4649623127877	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854915	146919920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_146855117_146866427_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
m54284U_201201_044215/141625766/ccs	chr17	+	1614	9	NNC	ENSMUSG00000052712.18	novel	1694	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	111.000492679087	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	471	False	NA	15	True	AATAAA	-16	NA	29487921	29520499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29488304_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
m54284U_201201_044215/141625905/ccs	chr2	-	2218	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_6	87.5817078821574	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277684_26279160
m54284U_201201_044215/141689714/ccs	chr18	-	4430	21	NIC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	307	junction_20	95.4622438454073	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCTGGCCTTTGGTGT	NA	False	NA	-5	True	NA	NA	NA	34757654	34732882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
m54284U_201201_044215/141690631/ccs	chr9	-	6323	24	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	54	0	intron_retention	FALSE	canonical	3	159	junction_4	115.72436452374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7237	False	NA	-3	True	AATAAA	-20	NA	22300430	22243307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
m54284U_201201_044215/141754757/ccs	chr11	-	3666	11	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_3	157.502507916541	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100240446_100242035_100242128_100242243_100242352_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201201_044215/141755285/ccs	chr19	-	1940	6	NNC	ENSMUSG00000071660.11	novel	3509	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	107.776806410285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATGCATCTTAGAAATT	1986	False	NA	-13	True	AATAAA	-11	NA	8796596	8786438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_8787461_8788210_8788281_8788998_8789203_8793217_8793401_8795799_8796049_8796384
m54284U_201201_044215/141757191/ccs	chr16	-	232	1	Intergenic	novelGene_8271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTATTTATTCAA	NA	False	NA	NA	False	AAAAAG	-43	NA	48128227	48127995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_48128000_48128200
m54284U_201201_044215/141821159/ccs	chr10	+	5849	15	NIC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	49.5421898126089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTCTCCCTCCCTGC	NA	False	NA	38	True	AATAAA	-21	NA	75047926	75148233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_75048052_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
m54284U_201201_044215/141886737/ccs	chr7	-	3143	8	NNC	ENSMUSG00000011382.9	novel	5323	7	NA	NA	0	-1970	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	6.27271382860004	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTTGTCTTTAATCC	NA	False	NA	-2	True	NA	NA	NA	45138229	45122380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_45122628_45122837_45124800_45125028_45125177_45128432_45128558_45131212_45131466_45136164_45136329_45137483_45137596_45138097
m54284U_201201_044215/141887558/ccs	chr13	+	4106	17	NIC	ENSMUSG00000021392.9	novel	4242	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	41.9221283303937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTCTTTTATTTAAAAA	NA	False	NA	23	True	ATTAAA	-16	NA	49806808	49832492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_49806874_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813495_49814433_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
m54284U_201201_044215/141888030/ccs	chr2	+	2586	8	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	49	junction_6	237.987051611414	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
m54284U_201201_044215/141951124/ccs	chrX	-	185	1	Intergenic	novelGene_9540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTAAGGTTATTGCAGA	NA	False	NA	NA	False	NA	NA	NA	93216996	93216811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_93216800_93217000
m54284U_201201_044215/141951368/ccs	chr1	+	4002	5	NNC	ENSMUSG00000042751.15	novel	4638	12	NA	NA	312	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	96.3872398193869	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTGTGTCTTTGT	NA	False	NA	13	True	AATAAA	-14	NA	152969537	152995007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_152969599_152969782_152969860_152987887_152987990_152988125_152988194_152991313
m54284U_201201_044215/141952418/ccs	chr8	-	3016	1	NIC	ENSMUSG00000031878.19	novel	1735	19	NA	NA	0	-3591	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATTTTTAGAATGCA	3334	False	NA	NA	False	NA	NA	NA	105261268	105258252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_105258300_105261300
m54284U_201201_044215/141952795/ccs	chr8	+	7017	1	Intergenic	novelGene_4219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	NA	False	NA	NA	False	NA	NA	NA	20119986	20127003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_20120000_20127000
m54284U_201201_044215/141952820/ccs	chr2	+	2310	15	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	145.444936631829	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174257828_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
m54284U_201201_044215/142017003/ccs	chr16	-	3551	17	NIC	ENSMUSG00000022974.13	novel	3973	18	NA	NA	55	0	intron_retention	FALSE	canonical	3	98	junction_10	90.7771137181614	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAATGAAAGGAACTCAG	NA	False	NA	7	True	AATACA	-41	NA	90841376	90811803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
m54284U_201201_044215/142017932/ccs	chr2	+	12149	24	NIC	ENSMUSG00000033943.16	novel	13931	24	NA	NA	0	-97	intron_retention	FALSE	canonical	3	29	junction_1	54.1820079094196	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTGATTATTTTTTTA	NA	False	NA	14	True	ATTAAA	-24	NA	119727708	119798133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
m54284U_201201_044215/142018937/ccs	chr13	+	3076	20	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_10	51.7295331347379	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274485	97312959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
m54284U_201201_044215/142082452/ccs	chr1	+	229	1	Intergenic	novelGene_501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGACAACAATACAATACAAG	NA	False	NA	NA	False	NA	NA	NA	179204186	179204415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_179204200_179204400
m54284U_201201_044215/142082489/ccs	chr1	-	170	1	Intergenic	novelGene_246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTTTAAAAAATTCTCT	NA	False	NA	NA	False	NA	NA	NA	91415079	91414909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_91414900_91415100
m54284U_201201_044215/142083674/ccs	chr2	-	3050	18	NIC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	5	junction_7	93.5130581337307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTTTGTCCATGATGT	NA	False	NA	7	True	ATTAAA	-42	NA	155534252	155476190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
m54284U_201201_044215/142084517/ccs	chr2	-	4480	27	NIC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	185	0	intron_retention	FALSE	canonical	3	65	junction_13	19.3627776871841	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753492	164733801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
m54284U_201201_044215/142084764/ccs	chrX	-	2580	7	NIC	ENSMUSG00000031200.17	novel	980	6	NA	NA	4	5598	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	21.2243309016379	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTTGTTACTAAAT	NA	False	NA	NA	False	AATAAA	-17	NA	74460190	74448451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_74448825_74453151_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620_74459820_74460143
m54284U_201201_044215/142147883/ccs	chr1	+	5750	39	ISM	ENSMUSG00000048960.14	ENSMUST00000027056.12	11053	40	67857	4862	-37208	615	3prime_fragment	FALSE	canonical	2	17	junction_16	5.02679799285209	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGATAGTTGTGCTTT	NA	False	NA	NA	False	ATTAAA	-14	NA	11131545	11369043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_11131622_11136017_11136141_11138234_11138340_11150246_11150349_11159940_11160103_11168686_11168821_11171287_11171392_11177826_11177977_11180505_11180651_11182966_11183068_11193344_11193449_11194037_11194088_11202561_11202638_11206988_11207062_11210179_11210323_11210459_11210553_11212872_11213022_11220033_11220120_11223766_11223904_11226464_11226583_11230319_11230505_11232463_11232626_11240076_11240300_11240807_11241016_11252078_11252259_11254669_11254765_11255353_11255437_11256110_11256202_11256860_11256990_11263736_11263779_11270058_11270277_11274289_11274393_11278735_11278880_11301905_11302021_11335902_11335970_11336192_11336384_11355280_11355384_11359476_11359545_11367931
m54284U_201201_044215/142148485/ccs	chr1	-	3902	14	NIC	ENSMUSG00000089872.11	novel	3995	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	11.9782840983518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCCTCATTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	190643967	190505075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
m54284U_201201_044215/142149477/ccs	chr7	-	2801	10	NIC	ENSMUSG00000030556.14	novel	2923	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_5	13.5026289164118	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTCTTCTCTCCTCCTGT	599	False	NA	-2	True	AATAAA	-16	NA	67294952	67163157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209718_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
m54284U_201201_044215/142149770/ccs	chr12	-	6911	32	ISM	ENSMUSG00000021061.16	ENSMUST00000021458.13	10394	36	411	16928	-113	-1286	5prime_fragment	FALSE	canonical	2	6	junction_26	5.26211994803944	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGGGGAAACACTTTAC	NA	False	NA	NA	False	AATAAA	-29	NA	76756910	76644189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_-_76644576_76645058_76645109_76645367_76645565_76646598_76646684_76647096_76647236_76648633_76648879_76650162_76650538_76650795_76651001_76652262_76652394_76653019_76653299_76654755_76654846_76655264_76655472_76655814_76656079_76657517_76657665_76658586_76658678_76658769_76658973_76659337_76660095_76665812_76665951_76667429_76668301_76668916_76669068_76669682_76669986_76671000_76671160_76671769_76671888_76673721_76673910_76674655_76674769_76675249_76675366_76675668_76675750_76676386_76676479_76677358_76677533_76679153_76679306_76696550_76696753_76756708
m54284U_201201_044215/142149816/ccs	chr19	-	1757	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_8	106.243529214724	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9773	False	NA	NA	False	AGTAAA	-14	NA	60215129	60187330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214663
m54284U_201201_044215/142214673/ccs	chr12	+	2322	10	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	206.409756683934	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
m54284U_201201_044215/142214746/ccs	chrX	-	1506	8	NIC	ENSMUSG00000057836.13	novel	1645	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_6	633.664142032638	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-7	True	AATAAA	-16	NA	72140665	72129900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72136875_72136911_72137788_72137859_72138551_72138689_72140586
m54284U_201201_044215/142215201/ccs	chr13	-	739	3	Intergenic	novelGene_7219	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	53	junction_2	15	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGCTTGTACTTGTGAA	NA	False	NA	-5	True	NA	NA	NA	81792384	81784034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_81784533_81785816_81786000_81792326
m54284U_201201_044215/14223019/ccs	chr6	-	7713	20	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	782	intron_retention	FALSE	canonical	0	0	junction_18	36.0633483879812	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825128	119548808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119824837
m54284U_201201_044215/142281119/ccs	chr2	+	2726	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	983	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	830.668092134242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896542	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904359_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201201_044215/142344886/ccs	chr9	-	500	1	Intergenic	novelGene_4888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTACAAGTCCACCTACC	9636	False	NA	NA	False	AAGAAA	-10	NA	65545901	65545401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65545400_65545900
m54284U_201201_044215/142411146/ccs	chr7	-	1690	7	NNC	ENSMUSG00000030654.10	novel	2171	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	893.01138477252	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGTTAACTCTGA	NA	False	NA	-11	True	ATTAAA	-25	NA	117728795	117718113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_117718425_117718815_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
m54284U_201201_044215/142475746/ccs	chr11	+	3312	6	ISM	ENSMUSG00000038366.16	ENSMUST00000148280.3	686	7	1563	-2645	253	0	3prime_fragment	FALSE	canonical	3	479	junction_5	97.3829553874804	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697580	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201201_044215/142672161/ccs	chr10	-	2768	12	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	0	-615	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	22.0262803213204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTGAAAAATCCCCAT	NA	False	NA	-8	True	AATAAA	-15	NA	87982795	87927908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357_87982511_87982713
m54284U_201201_044215/142672384/ccs	chr11	+	3943	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	655	junction_8	71.9702436867582	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTGGATTCTAGTA	NA	False	NA	26	True	AATAAA	-18	NA	74788923	74800168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
m54284U_201201_044215/142673723/ccs	chr17	-	1390	6	NNC	ENSMUSG00000039615.10	novel	1408	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	73	junction_4	597.282043928997	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6753	False	NA	-19	True	AATAAA	-15	NA	26051927	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_26049985_26050075_26050193_26050282_26050606_26050769_26050884_26051019_26051219_26051665
m54284U_201201_044215/142737861/ccs	chr11	+	3117	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	970	junction_6	97.2474506949497	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
m54284U_201201_044215/142804987/ccs	chr10	-	3202	11	NIC	ENSMUSG00000035640.19	novel	3175	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	10.5380263806844	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGCTCTGGGTTTTC	9074	False	NA	-6	True	CATAAA	-13	NA	79975199	79966384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79968086_79968838_79969020_79970394_79970603_79970951_79971081_79971208_79971381_79972183_79972329_79972496_79972578_79972707_79972773_79972876_79973017_79973121_79973222_79974919
m54284U_201201_044215/142805546/ccs	chr5	-	2562	1	Antisense	novelGene_ENSMUSG00000064037.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGGGCTGCTGCTCGG	NA	False	NA	NA	False	NA	NA	NA	31665658	31663096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_31663100_31665700
m54284U_201201_044215/142870057/ccs	chr3	-	180	1	Intergenic	novelGene_1581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAAAAGGGAAATTAGCA	2054	False	NA	NA	False	NA	NA	NA	96196418	96196238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_96196200_96196400
m54284U_201201_044215/142871251/ccs	chr9	+	3557	23	NIC	ENSMUSG00000035919.17	novel	3495	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_1	19.496609156339	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGGACTGAATTTATAA	NA	False	NA	3	True	AATAAA	-20	NA	22387026	22799576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_22387487_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
m54284U_201201_044215/14288040/ccs	chr11	-	4073	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_8	14.9994791576241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269590	120260387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
m54284U_201201_044215/14289057/ccs	chr1	-	4365	3	NIC	ENSMUSG00000001305.6	novel	3092	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1054	junction_2	5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATCTCTGCTTCCCTG	NA	False	NA	-16	True	ATTAAA	-12	NA	186481522	186453288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_186453744_186468312_186472061_186481360
m54284U_201201_044215/14289136/ccs	chr5	-	185	1	Intergenic	novelGene_3064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTTCCTTATGGGGGC	8862	False	NA	NA	False	NA	NA	NA	145129509	145129324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_145129300_145129500
m54284U_201201_044215/14289356/ccs	chr1	-	207	1	Intergenic	novelGene_142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGGGCAGTCTATAGCC	NA	False	NA	NA	False	NA	NA	NA	59734666	59734459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59734500_59734700
m54284U_201201_044215/143001469/ccs	chr10	-	4911	1	Antisense	novelGene_ENSMUSG00000038587.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	4218558	4213647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_-_4213600_4218600
m54284U_201201_044215/143002106/ccs	chr10	-	199	1	Intergenic	novelGene_5358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAACAAAAAACAAAACC	5418	False	NA	NA	False	NA	NA	NA	62772413	62772214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62772200_62772400
m54284U_201201_044215/143002303/ccs	chr19	+	2934	9	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_1	88.100705871179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043536	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38043766_38045857_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/143065174/ccs	chr11	-	2392	24	NIC	ENSMUSG00000018340.14	novel	2471	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_11	138.51551611339	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924271	54869933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
m54284U_201201_044215/143067702/ccs	chr9	+	202	1	Intergenic	novelGene_4858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAAACTTAGGGCAGTAA	NA	False	NA	NA	False	NA	NA	NA	64151852	64152054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64151900_64152100
m54284U_201201_044215/143131088/ccs	chr13	-	3065	14	NIC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	0	82	combination_of_known_junctions	FALSE	canonical	3	56	junction_12	89.8987596257508	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730268	68709399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68728669_68728835_68730183
m54284U_201201_044215/143132520/ccs	chr8	-	2375	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	866.660215360604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTACTTGGCTTCACTGG	NA	False	NA	-12	True	AATAAA	-19	NA	26337722	26306903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329955_26330039_26330104_26337606
m54284U_201201_044215/143132561/ccs	chr7	+	1109	8	NIC	ENSMUSG00000030588.13	novel	816	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	515.665569523346	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6181	False	NA	12	True	AATAAA	-15	NA	28937897	28946954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28937989_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
m54284U_201201_044215/143133313/ccs	chr3	+	2396	17	Fusion	ENSMUSG00000097724.3_ENSMUSG00000027823.10	novel	2669	2	NA	NA	1163	-5829	multi-exon	FALSE	canonical	2	3	junction_1	399.314524959649	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTGTGTAACTGAGGC	NA	False	NA	13	True	AATAAA	-13	NA	63872218	63924171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr3_+_63872330_63874687_63874902_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
m54284U_201201_044215/143133415/ccs	chr14	+	1139	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_5	826.422703206416	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296835	14303777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299953_14300065_14300336_14300429_14302918_14303061_14303291
m54284U_201201_044215/143198607/ccs	chr7	+	4719	25	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	231.289497377685	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTGTGTTTTTC	7239	False	NA	NA	False	AAGAAA	-2	NA	109617521	109655816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651920_109652125_109653206_109653324_109654223
m54284U_201201_044215/143263457/ccs	chr9	+	2061	11	NIC	ENSMUSG00000031939.17	novel	1216	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	223	junction_10	144.867387634346	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATAGTTTGTATGTA	9118	False	NA	7	True	NA	NA	NA	15217555	15228274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15224069_15224133_15225285_15225329_15225526_15226428_15226678_15226737_15228184
m54284U_201201_044215/143263696/ccs	chr3	-	4679	26	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	562	junction_12	50.8205627674468	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069723	100045495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_100046159_100046374_100046469_100047494_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
m54284U_201201_044215/143263908/ccs	chr12	+	183	1	Intergenic	novelGene_6626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGGTTGGGATGCTTT	NA	False	NA	NA	False	NA	NA	NA	45660525	45660708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_45660500_45660700
m54284U_201201_044215/143329793/ccs	chr3	+	3426	7	NIC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	3249	junction_3	142.894677608681	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGCTTGACTTTGTTAA	NA	False	NA	19	True	AATAAA	-22	NA	89986971	90008209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89997167_89997316_89997387_90006834
m54284U_201201_044215/143393995/ccs	chr13	+	1717	9	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	145.098027209194	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481295	99552070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_99481384_99484839_99484918_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
m54284U_201201_044215/143395608/ccs	chr11	+	2070	15	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	34.185344156554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGATGGTGCATTCCT	875	False	NA	11	True	AATAAA	-14	NA	98249193	98271938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266367_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
m54284U_201201_044215/143458344/ccschrUn	chrUn_MU069435v1	+	489	2	Intergenic	novelGene_9748	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTCTCCAGCTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	14904	22054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_MU069435v1_+_15016_21676
m54284U_201201_044215/143458427/ccs	chr16	-	3040	5	NNC	ENSMUSG00000022828.11	novel	3084	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	126.618521551944	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGTTATACTCACTAA	NA	False	NA	NA	False	AATAAA	-36	NA	37360151	37330151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360058
m54284U_201201_044215/143458643/ccs	chr2	+	3549	22	NIC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	59	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	133.533828847645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428750	118472072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_118428943_118430618_118430766_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
m54284U_201201_044215/143460635/ccs	chr5	+	4941	20	NIC	ENSMUSG00000005672.13	novel	5214	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	331.730241172835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	766	False	NA	14	True	NA	NA	NA	75735614	75817382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_75735779_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799819_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
m54284U_201201_044215/143523978/ccs	chr13	+	4268	8	NIC	ENSMUSG00000021728.9	novel	2923	9	NA	NA	0	-1008	intron_retention	FALSE	canonical	3	356	junction_7	31.184768652635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTGTCTTAAGTGTTT	NA	False	NA	12	True	ATTAAA	-13	NA	117357251	117409943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117404136_117405465_117405500_117408580_117408636_117409580
m54284U_201201_044215/143525067/ccs	chr16	-	5590	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	19.6897816138219	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800154	43785395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799982
m54284U_201201_044215/14353123/ccs	chr18	-	3345	17	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	49.2946735839685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-23	True	NA	-23	True	AATAAA	-14	NA	6135970	6025216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6135803
m54284U_201201_044215/14354004/ccs	chr11	-	2227	16	NNC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	141.198300273056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976388_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
m54284U_201201_044215/14354972/ccs	chr6	+	187	1	Intergenic	novelGene_3558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATCTACTTAGTT	307	False	NA	NA	False	NA	NA	NA	136954832	136955019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_136954800_136955000
m54284U_201201_044215/143589553/ccs	chr2	+	135	1	Intergenic	novelGene_1037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACCTCAGAATAATTTT	NA	False	NA	NA	False	NA	NA	NA	121828849	121828984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121828800_121829000
m54284U_201201_044215/143720662/ccs	chr12	-	170	1	Intergenic	novelGene_6702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAGAAACAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	71161904	71161734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71161700_71161900
m54284U_201201_044215/143786381/ccs	chr7	-	216	2	Antisense	novelGene_ENSMUSG00002076150.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	16	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGAATTCCCCTCTCCC	NA	False	NA	NA	False	AATAAA	-37	NA	79654221	79598466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_79598634_79654172
m54284U_201201_044215/143787455/ccs	chr3	+	1225	11	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	227.48013100049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281986	145309868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_145282174_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
m54284U_201201_044215/143917452/ccs	chr8	+	3902	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_8	73.017501707163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9251	False	NA	NA	False	AATAAA	-23	NA	70243899	70260399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250491_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
m54284U_201201_044215/143919124/ccs	chr15	+	172	1	Intergenic	novelGene_7750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTTTTAAAAAAAAGGCA	NA	False	NA	NA	False	NA	NA	NA	73257750	73257922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_73257800_73257900
m54284U_201201_044215/144050172/ccs	chr12	-	3800	22	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_3	69.1090039124332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	80307145	80214320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
m54284U_201201_044215/144050194/ccs	chr18	+	2281	4	NNC	ENSMUSG00000102918.2	novel	3588	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	99.533355659743	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGACCGCGTCTGTTTAA	NA	False	NA	17	True	AATAAA	-20	NA	37939468	37974926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
m54284U_201201_044215/144050631/ccs	chr19	+	3273	13	NNC	ENSMUSG00000024949.18	novel	4353	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_9	334.755663382513	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6425687
m54284U_201201_044215/144050831/ccs	chr13	+	196	1	Intergenic	novelGene_6952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGAACTTATTGTGG	NA	False	NA	NA	False	NA	NA	NA	6219711	6219907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_6219700_6219900
m54284U_201201_044215/144179512/ccs	chr15	+	4265	15	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	75.2973696589132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGCAAGTTTGGAAGTG	20	True	NA	28	True	ATTAAA	-31	NA	12205113	12272080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
m54284U_201201_044215/14418008/ccs	chr17	+	7341	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	70.780765419582	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
m54284U_201201_044215/144180323/ccs	chr5	+	3990	8	NIC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_1	67.0391296032338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	NA	False	NA	9	True	AATAAA	-21	NA	37025856	37112422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_37026235_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
m54284U_201201_044215/144181203/ccs	chr5	-	1730	11	NNC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_9	338.558414457535	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650206	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24648990_24649073_24649304_24650063
m54284U_201201_044215/144181715/ccs	chr17	+	3411	19	NNC	ENSMUSG00000002365.11	novel	3331	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_13	75.5438103616082	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGCAGATTCCCAAAGTA	NA	False	NA	NA	False	AATAAA	-17	NA	5891626	5982229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5971200_5971304_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
m54284U_201201_044215/14418244/ccs	chr3	+	7431	12	NIC	ENSMUSG00000042035.12	novel	7371	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	19.1665169475527	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTTGCCACATGCTGAA	252	False	NA	14	True	NA	NA	NA	101284398	101370375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101340230_101340291_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
m54284U_201201_044215/14419826/ccs	chr11	-	472	1	FSM	ENSMUSG00000083022.2	ENSMUST00000117476.2	393	1	-28	-51	-28	51	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACAACCAAACAAAAC	NA	False	NA	0	True	AATAAA	-34	NA	6123064	6122592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6122600_6123100
m54284U_201201_044215/144247021/ccs	chr11	-	193	1	Intergenic	novelGene_6095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGAGGATGGAGGATC	NA	False	NA	NA	False	NA	NA	NA	79880060	79879867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79879900_79880100
m54284U_201201_044215/144247583/ccs	chrX	+	2762	22	NNC	ENSMUSG00000031309.16	novel	755	2	NA	NA	-118	297	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	12.7339779727836	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTGGATTAACAGTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	158038659	158147033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158038716_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
m54284U_201201_044215/144312947/ccs	chr15	-	210	1	Intergenic	novelGene_7777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAAGAAAC	8476	False	NA	NA	False	NA	NA	NA	76503796	76503586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76503600_76503800
m54284U_201201_044215/1443753/ccs	chr2	-	3053	11	NNC	ENSMUSG00000037376.15	novel	2828	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	115.942270117503	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	-12	True	AATAAA	-23	NA	132657974	132646126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652654_132652908_132653019_132653967_132654096_132657723
m54284U_201201_044215/144375893/ccs	chr11	+	1456	11	ISM	ENSMUSG00000020612.17	ENSMUST00000106677.8	3513	12	1106	1864	-64	816	3prime_fragment	TRUE	canonical	3	19	junction_1	469.287342680367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTGGCTGTCACCGCTT	NA	False	NA	25	True	AATAAA	-14	NA	109541336	109558618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_109541451_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
m54284U_201201_044215/144378656/ccs	chr16	+	1381	10	NNC	ENSMUSG00000055692.22	novel	1631	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_8	80.0083328993508	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094172	17096525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095588_17095714_17095756_17095835
m54284U_201201_044215/1444235/ccs	chr3	+	5205	22	NIC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	0	-636	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	45.6890307223153	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAGACTACACTGCA	NA	False	NA	9	True	AATAAA	-23	NA	85878415	86035781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_85878732_85948132_85948173_85982454_85982496_85986251_85986292_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
m54284U_201201_044215/144441601/ccs	chr2	-	3563	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_19	58.1895824009762	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGTACTGTCATTTTT	NA	False	NA	0	True	ATTAAA	-37	NA	11782361	11747383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782242
m54284U_201201_044215/144442266/ccs	chr3	-	5682	10	NNC	ENSMUSG00000040943.13	novel	9021	12	NA	NA	-4853	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	31.2516666222246	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTCTGTTGCAGAGGT	NA	False	NA	-5	True	AATAAA	-24	NA	133191296	133169439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182394_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272
m54284U_201201_044215/144443998/ccs	chr3	+	2162	2	NIC	ENSMUSG00000037211.13	novel	2451	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694095	37698747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_37694214_37696703
m54284U_201201_044215/144509672/ccs	chr10	+	3479	16	NNC	ENSMUSG00000020250.12	novel	2297	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	22	junction_2	261.243658083577	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGCCTTCTGACTGAGT	NA	False	NA	15	True	AATAAA	-16	NA	82695040	82733546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_82695135_82696357_82696465_82708771_82708847_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
m54284U_201201_044215/144572750/ccs	chr2	+	1551	12	NIC	ENSMUSG00000027509.12	novel	1742	12	NA	NA	0	-58	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	326.651961776187	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCCCTTCATCCCTTTC	NA	False	NA	27	True	AATAAA	-16	NA	172841916	172857474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_172842044_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
m54284U_201201_044215/144574658/ccs	chr7	-	2227	12	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	0	-282	combination_of_known_junctions	FALSE	canonical	3	44	junction_11	251.022010164003	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTGGGCACAGCAGGTC	NA	False	NA	-10	True	AATAAA	-21	NA	132725585	132589631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869_132725086_132725386
m54284U_201201_044215/144638050/ccs	chr14	+	3668	4	NIC	ENSMUSG00000036282.16	novel	4446	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	144.652072996629	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACAGCTGTGTGCATTCT	NA	False	NA	37	True	AATAAA	-34	NA	49409682	49428342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_49409835_49415508_49415633_49418162_49418219_49425006
m54284U_201201_044215/144638130/ccs	chr4	-	1198	7	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	2123	junction_6	174.331102598857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744530	117741522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743343_117743472_117743557_117743786_117743836_117744366
m54284U_201201_044215/144638222/ccs	chr9	+	3498	20	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	529.673719668514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279233	21316657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21279396_21298995_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
m54284U_201201_044215/144640393/ccs	chr6	-	1971	6	NIC	ENSMUSG00000033216.10	novel	2208	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	186.723967395726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTAGTGTGCCCATAGT	NA	False	NA	-17	True	AATAAA	-12	NA	88423509	88234854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_88235374_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
m54284U_201201_044215/144704945/ccs	chr15	+	222	1	Intergenic	novelGene_7699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	358	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACATACATGTCTTGCCT	NA	False	NA	NA	False	TTTAAA	-12	NA	41810478	41810700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_41810500_41810700
m54284U_201201_044215/144705595/ccs	chr11	-	203	1	Intergenic	novelGene_6332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTCTCCCTACTGCAC	NA	False	NA	NA	False	NA	NA	NA	101247611	101247408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_101247400_101247600
m54284U_201201_044215/144705855/ccs	chr3	+	3063	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_23	121.920310572839	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/144769253/ccs	chrX	-	2241	6	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	117	junction_2	83.8035798758024	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838029	100833953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_100834130_100834212_100834505_100834844_100834891_100835166_100835250_100835786_100835944_100836542
m54284U_201201_044215/144770708/ccs	chr11	+	776	4	NIC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	3662	junction_1	454.557904879993	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_62493850_62494060_62494473_62495228_62495293_62495480
m54284U_201201_044215/14484184/ccs	chr6	+	183	1	Intergenic	novelGene_3598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATATTTAC	NA	False	NA	NA	False	NA	NA	NA	149303759	149303942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_149303800_149303900
m54284U_201201_044215/14485916/ccs	chr18	-	1912	1	FSM	ENSMUSG00000060096.6	ENSMUST00000072796.6	1005	1	-324	-583	-324	583	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTCATTGGGGTTGG	NA	False	NA	NA	False	ATTAAA	-44	NA	64583084	64581172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_64581200_64583100
m54284U_201201_044215/144965843/ccs	chr3	-	196	1	Intergenic	novelGene_1490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCATTTGGGTGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	88535562	88535366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88535400_88535600
m54284U_201201_044215/144966365/ccs	chr12	-	2011	5	NIC	ENSMUSG00000059436.14	novel	1926	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.5714979643834	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGTAGTAGTGTCTTC	NA	False	NA	-5	True	AATAAA	-15	NA	77008975	76984047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_76985530_76986203_76986289_76986740_76986865_76999942_77000051_77008763
m54284U_201201_044215/144966562/ccs	chr13	+	4704	12	Fusion	ENSMUSG00000021408.16_ENSMUSG00000091462.3	novel	3266	11	NA	NA	0	140	multi-exon	FALSE	canonical	3	30	junction_11	5.53277238352834	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGCATCTCCTGTGCT	NA	False	NA	NA	False	AATAAA	-22	NA	34186382	34219159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478_34217402_34217425
m54284U_201201_044215/145032316/ccs	chr10	-	1109	2	NIC	ENSMUSG00000112261.2	novel	660	3	NA	NA	0	561	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCAGAAACCCTAAG	1553	False	NA	NA	False	AAGAAA	-10	NA	95297086	95280616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_95281620_95296980
m54284U_201201_044215/145032667/ccs	chr10	-	203	1	Intergenic	novelGene_5590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTACCAGGCAACGTTC	NA	False	NA	NA	False	NA	NA	NA	122790086	122789883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_122789900_122790100
m54284U_201201_044215/145032868/ccs	chr1	+	2865	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	109.828275047913	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_175708423_175708697_175708794_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201201_044215/145033448/ccs	chr8	-	1347	6	NIC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	664	junction_2	517.649920312947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85744885_85745150_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
m54284U_201201_044215/145163699/ccs	chr12	+	1824	14	NIC	ENSMUSG00000021177.17	novel	3945	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_13	129.038226527357	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTACTGTGAGACCTTTA	NA	False	NA	3	True	NA	NA	NA	99850775	99885563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_99850812_99857435_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99885326
m54284U_201201_044215/145228228/ccs	chr9	+	4210	7	NNC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	231.690646240964	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198865	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59218572_59220520_59221035_59221135_59222013
m54284U_201201_044215/145228235/ccs	chr8	+	4312	33	NNC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	11	junction_1	57.0968116311016	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566873	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_3567002_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
m54284U_201201_044215/145229996/ccs	chr14	-	3295	7	NIC	ENSMUSG00000022178.12	novel	3397	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_6	147.662245983491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGAGTGTATTGTGGT	NA	False	NA	-6	True	AGTAAA	-18	NA	54815015	54804928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54813688
m54284U_201201_044215/145296174/ccs	chr11	+	1388	9	NNC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	932.389931506663	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068547	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_9068835_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
m54284U_201201_044215/145360030/ccs	chr7	+	1855	8	NIC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	417	junction_1	68.1603751067574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	3125	False	NA	25	True	NA	NA	NA	44711919	44727634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725853_44725975_44726164_44726244_44726354_44726735
m54284U_201201_044215/145360956/ccs	chr3	-	4559	26	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	105.693140742434	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCATGTTTTAAC	NA	False	NA	0	True	NA	NA	NA	62414425	62375433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_62375729_62376789_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
m54284U_201201_044215/145361504/ccs	chr3	-	3231	10	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2549	junction_6	108.41973762269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352525	108333927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
m54284U_201201_044215/145361577/ccs	chr13	-	2730	5	NNC	ENSMUSG00000113406.2	novel	604	4	NA	NA	0	-341	at_least_one_novel_splicesite	TRUE	canonical	3	20	junction_1	33.8110558841335	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	7281	False	NA	NA	False	NA	NA	NA	65496411	65484376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_65486220_65486639_65487225_65488362_65488424_65488791_65488919_65496297
m54284U_201201_044215/145425814/ccs	chr16	+	3110	7	NNC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	149.069335098358	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17577540	17611246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_17578119_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
m54284U_201201_044215/145427037/ccs	chr9	-	1054	6	NNC	ENSMUSG00000032436.18	novel	993	5	NA	NA	-135	0	at_least_one_novel_splicesite	TRUE	canonical	3	44	junction_1	525.219192337828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTCCTTATTGCATG	NA	False	NA	-17	True	AATAAA	-13	NA	114611059	114585906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_114586099_114586176_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
m54284U_201201_044215/145492331/ccs	chr11	+	2739	12	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	514.270726529606	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207038	101214363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101207315_101207846_101207922_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
m54284U_201201_044215/14549517/ccs	chr10	+	2812	14	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_3	448.739694711163	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTGCCTGTCATTGG	1561	False	NA	23	True	AATAAA	-13	NA	79690438	79700266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694905_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
m54284U_201201_044215/14550735/ccs	chr4	-	175	1	Intergenic	novelGene_1839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAGAGGAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	44280075	44279900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_44279900_44280100
m54284U_201201_044215/145556926/ccs	chr7	+	2968	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	322.021393354196	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648595_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201201_044215/145557424/ccs	chr19	+	2688	10	NIC	ENSMUSG00000024989.16	novel	2683	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	103.855669079738	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043536	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38043766_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/145622348/ccs	chr8	-	180	1	Intergenic	novelGene_4447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGAATGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	106629566	106629386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106629400_106629600
m54284U_201201_044215/145687799/ccs	chr9	-	5330	8	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	212	junction_4	351.164593073635	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993210	96957013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971647_96975129_96975231_96979155_96979234_96982127_96982293_96992963
m54284U_201201_044215/145689285/ccs	chr5	+	174	1	Intergenic	novelGene_2790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGATTAAATAATA	NA	False	NA	NA	False	NA	NA	NA	114839993	114840167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_114840000_114840200
m54284U_201201_044215/145752189/ccs	chr9	-	1399	15	NIC	ENSMUSG00000023262.14	novel	1529	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_14	59.3909565025326	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTTAATACTGTGGACA	NA	False	NA	-16	True	AATAAA	-18	NA	106315401	106310188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315331
m54284U_201201_044215/145752274/ccs	chr4	-	1991	12	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_10	108.826345862199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952980	147945247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952525_147952641_147952825
m54284U_201201_044215/145754307/ccs	chr5	-	204	1	Intergenic	novelGene_2859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAGAAAAGGAAGGCACA	NA	False	NA	NA	False	NA	NA	NA	121776080	121775876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121775900_121776100
m54284U_201201_044215/145820060/ccs	chr5	+	173	1	Intergenic	novelGene_2728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTAAAAAAAAAGGAC	NA	False	NA	2	True	NA	NA	NA	107285949	107286122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_107285900_107286100
m54284U_201201_044215/145883426/ccs	chr2	-	4158	20	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_17	591.915642151669	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627994	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075_103627286_103627807
m54284U_201201_044215/145949412/ccs	chr4	-	182	1	Intergenic	novelGene_1843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGACTCCAGCTACAGAGA	NA	False	NA	0	True	NA	NA	NA	44946295	44946113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_44946100_44946300
m54284U_201201_044215/145950212/ccs	chr8	+	2061	9	NNC	ENSMUSG00000046295.14	novel	2136	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	25.4358875410315	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTTTGTCTCCATGTC	NA	False	NA	18	True	NA	NA	NA	71858665	71862548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859919_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
m54284U_201201_044215/145950985/ccs	chr13	+	2207	1	NIC	ENSMUSG00000021476.10	novel	4903	7	NA	NA	0	457	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACCCAGGGTTTTATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	64309682	64311889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_64309700_64311900
m54284U_201201_044215/145951295/ccs	chr12	+	4013	8	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	-51	intron_retention	FALSE	canonical	3	5416	junction_7	497.276254680824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758239	24764094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
m54284U_201201_044215/145951422/ccs	chr15	-	1882	15	NNC	ENSMUSG00000037570.17	novel	1916	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	228.257205890233	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTATTTTTTTTT	NA	False	NA	0	True	AATAAA	-20	NA	99149842	99140698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146364_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
m54284U_201201_044215/145951533/ccs	chr7	-	2169	6	NIC	ENSMUSG00000050605.18	novel	2480	7	NA	NA	89	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	15.3310143173894	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAAAAGACTCGTATC	NA	False	NA	-11	True	TATAAA	-5	NA	23998973	23990481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23997698_23997801_23998617
m54284U_201201_044215/146015155/ccs	chr14	+	2674	12	NIC	ENSMUSG00000015971.6	novel	2119	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	289	junction_4	27.7366601098544	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACTGATTTGAGATAAT	NA	False	NA	21	True	ATTAAA	-25	NA	29700361	29715176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29713713_29714917
m54284U_201201_044215/146016676/ccs	chr11	+	3847	20	NIC	ENSMUSG00000019302.17	novel	4008	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_17	45.3592615005813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTCTCTGAGTGTG	NA	False	NA	17	True	AATAAA	-22	NA	100900312	100954545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100945851_100945970_100946259_100946432_100953137
m54284U_201201_044215/146081559/ccs	chr11	+	4459	24	NNC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_17	52.9065945839702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	987	False	NA	21	True	AATAAA	-24	NA	101443692	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463615_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
m54284U_201201_044215/146145520/ccs	chr6	+	4616	27	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_19	24.6783149904776	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369645	140542836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526072_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
m54284U_201201_044215/146145810/ccs	chr1	+	3154	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	346	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	105.035755816769	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059759	159173016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
m54284U_201201_044215/146146882/ccs	chr12	+	5023	14	NIC	ENSMUSG00000048285.10	novel	2721	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	44.4026759681902	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTCTTGTTATTATAC	962	False	NA	NA	False	AATAAA	-21	NA	70872462	70949008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_70872908_70910650_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
m54284U_201201_044215/14614755/ccs	chr13	+	2941	11	NNC	ENSMUSG00000025451.16	novel	2551	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	104.451376247515	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATCTTAAAGAATTTTT	NA	False	NA	46	True	AATAAA	-31	NA	119565457	119594754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_119566087_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
m54284U_201201_044215/146147633/ccs	chr7	+	2283	19	NIC	ENSMUSG00000040811.16	novel	2255	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	33.4490583749803	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18915128	18940407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_18915211_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
m54284U_201201_044215/14615028/ccs	chr4	-	6720	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-93	-476	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_29	58.6920053016235	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCATCCTGCTGTAT	NA	False	NA	-8	True	AATAAA	-14	NA	126862021	126756207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861604
m54284U_201201_044215/14615682/ccs	chr6	-	2620	6	NIC	ENSMUSG00000055239.11	novel	3251	7	NA	NA	0	60	intron_retention	FALSE	canonical	3	1059	junction_2	48.2601284706123	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGCATGAGGTTTTTTG	8465	False	NA	-24	True	AATAAA	-24	NA	72876962	72819491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_72820114_72825207_72825491_72826426_72827468_72835756_72835897_72838740_72838909_72876596
m54284U_201201_044215/14616091/ccs	chr1	+	2019	15	NNC	ENSMUSG00000026427.17	novel	2009	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	171.640820985485	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTTATTTCTAATCTAAA	NA	False	NA	41	True	AATAAA	-22	NA	131080917	131101215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088136_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
m54284U_201201_044215/14616813/ccs	chr15	-	2861	15	NIC	ENSMUSG00000022283.16	novel	2817	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	1540.43655354909	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGTTATGCTTTTATTT	377	False	NA	-7	True	AATAAA	-16	NA	36609217	36595904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_36596344_36596762_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
m54284U_201201_044215/146212233/ccs	chr8	+	2688	13	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	377.101472860202	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13388921_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420171_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201201_044215/146278891/ccs	chr14	+	3527	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	305	junction_11	32.6737407306438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	False	NA	25	True	AATAAA	-32	NA	30973459	30981901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30973612_30973706_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
m54284U_201201_044215/146279261/ccs	chr1	+	188	1	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAACTAAAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	18188670	18188858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_18188700_18188900
m54284U_201201_044215/146475584/ccs	chr18	-	5142	26	NNC	ENSMUSG00000006740.15	novel	6032	26	NA	NA	0	-892	intron_retention	TRUE	canonical	0	0	junction_8	276.15437421848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTGTTGTAGTCTGC	-5	True	NA	4	True	NA	NA	NA	6241523	6201893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_6203708_6208184_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
m54284U_201201_044215/146538897/ccs	chr2	+	4170	5	NIC	ENSMUSG00000047909.12	novel	1485	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_2	17.8097585609688	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGGCCTATTCAATT	4804	False	NA	33	True	AATAAA	-35	NA	11783337	11795136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_11783714_11784487_11784635_11786287_11789264_11791034_11791114_11794544
m54284U_201201_044215/146605246/ccs	chr7	+	1776	7	NIC	ENSMUSG00000042289.12	novel	1828	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	28.5389597256491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCTACCTTTTACCCA	1884	False	NA	14	True	AATAAA	-15	NA	127399775	127402974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127399887_127400298_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
m54284U_201201_044215/146672069/ccs	chr8	-	2359	8	NIC	ENSMUSG00000031701.7	novel	2919	9	NA	NA	70	-996	intron_retention	FALSE	canonical	3	694	junction_1	55.5488385962097	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTGTGTCACATTTTT	NA	False	NA	-4	True	AATAAA	-17	NA	86281903	86265257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280606_86281798
m54284U_201201_044215/146735612/ccs	chr6	-	3087	13	NNC	ENSMUSG00000055799.14	novel	1888	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	133.076706159351	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	4823	False	NA	-8	True	AATAAA	-14	NA	72766237	72603360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610305_72611082_72611216_72625783_72625826_72626102_72626187_72765193_72765322_72765544_72765609_72765692
m54284U_201201_044215/146735729/ccs	chr2	-	2299	7	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	90983	0	37589	0	3prime_fragment	FALSE	canonical	2	10	junction_5	5.30461015427985	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTATCCTTGTGGTTACT	NA	False	NA	-5	True	NA	NA	NA	164985790	164953426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973_164984228_164985561
m54284U_201201_044215/146737077/ccs	chr3	-	3202	5	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	-452	819	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	110.3653025185	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATAGCCTACTCTTTTT	NA	False	NA	-4	True	NA	NA	NA	102073708	102063213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088_102073128_102073513
m54284U_201201_044215/146737674/ccs	chr19	+	4547	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	0	-2771	intron_retention	FALSE	canonical	3	1554	junction_5	141.919792488574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919358	38956724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
m54284U_201201_044215/14681344/ccs	chr10	+	155	1	Intergenic	novelGene_5588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATACATAAAAATT	NA	False	NA	NA	False	NA	NA	NA	121873377	121873532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_121873400_121873500
m54284U_201201_044215/146866468/ccs	chr9	+	190	1	Intergenic	novelGene_5061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCACATCAGGCCACCC	NA	False	NA	NA	False	NA	NA	NA	106070954	106071144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_106071000_106071100
m54284U_201201_044215/146867414/ccs	chr5	+	4657	6	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1098	junction_5	51.3380950172482	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238124	139255084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139253058_139253157_139253231_139254735
m54284U_201201_044215/146867653/ccs	chr5	-	5503	31	NIC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	0	1370	combination_of_known_junctions	FALSE	canonical	3	24	junction_30	121.800091224195	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563977	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563909
m54284U_201201_044215/146868797/ccs	chrX	+	3259	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	19	junction_3	89.9133047266304	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258636	70358901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
m54284U_201201_044215/146868841/ccs	chr6	+	223	1	Intergenic	novelGene_3529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTTCCCCCCCACCTC	NA	False	NA	NA	False	NA	NA	NA	128457372	128457595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_128457400_128457600
m54284U_201201_044215/146932157/ccs	chr17	-	1402	5	NIC	ENSMUSG00000019579.14	novel	1710	6	NA	NA	0	-800	intron_retention	FALSE	canonical	3	1137	junction_1	48.7570507721704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGATTCTCATCGTT	NA	False	NA	-3	True	AATAAA	-42	NA	56490920	56483543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56484004_56484698_56485346_56486363_56486426_56489664_56489716_56490738
m54284U_201201_044215/146933981/ccs	chr17	+	156	1	Intergenic	novelGene_8357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAGGGAGAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	7135757	7135913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_7135800_7135900
m54284U_201201_044215/146999661/ccs	chr19	+	2690	12	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_1	17.7223769463382	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159032	42180156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
m54284U_201201_044215/147000127/ccs	chr2	-	165	1	Intergenic	novelGene_654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTACAATGTGA	5649	False	NA	NA	False	NA	NA	NA	27442274	27442109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_27442100_27442300
m54284U_201201_044215/147063110/ccs	chr2	+	160	1	Intergenic	novelGene_813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCCTTTTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	60500907	60501067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_60500900_60501100
m54284U_201201_044215/147065381/ccs	chr1	-	190	1	Intergenic	novelGene_299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCAGAGTGATTCTGAA	NA	False	NA	NA	False	NA	NA	NA	131377673	131377483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_131377500_131377700
m54284U_201201_044215/147194036/ccs	chr13	+	179	1	Intergenic	novelGene_7269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATTGCCCTTCATTGT	NA	False	NA	NA	False	NA	NA	NA	97553148	97553327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97553100_97553300
m54284U_201201_044215/147194176/ccs	chr6	+	6456	28	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	88.3838430014429	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891348	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
m54284U_201201_044215/147194228/ccs	chr11	-	5133	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	459	junction_1	255.273980064477	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915015	98883768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
m54284U_201201_044215/147195461/ccs	chr7	-	2269	11	NNC	ENSMUSG00000040650.9	novel	2189	9	NA	NA	-24742	-254	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	20.9334660293034	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATTCATGTGTGTTTT	NA	False	NA	-1	True	CATAAA	-37	NA	26410604	26364905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_26365540_26372149_26372292_26372461_26372650_26373780_26373923_26374420_26374598_26378817_26378979_26380739_26380890_26381021_26381185_26385684_26385816_26389739_26389834_26410317
m54284U_201201_044215/147260527/ccs	chr3	+	3791	18	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	25.8459637241572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067804	95081335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95068010_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
m54284U_201201_044215/147260722/ccs	chr14	+	169	1	Intergenic	novelGene_7334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8549817	8549986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_8549800_8550000
m54284U_201201_044215/147261295/ccs	chr4	-	5683	20	NIC	ENSMUSG00000028906.18	novel	5303	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	38.5763982786771	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776402	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
m54284U_201201_044215/147262172/ccs	chr7	-	910	4	NIC	ENSMUSG00000070371.12	novel	1052	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	36.3409777890836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGGCTTTGTGGCATCT	NA	False	NA	NA	False	AATAAA	-15	NA	127534691	127531809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_127532287_127532542_127532665_127533561_127533800_127534618
m54284U_201201_044215/147326075/ccs	chr2	+	1661	12	NIC	ENSMUSG00000068882.14	novel	2001	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_10	472.143538196974	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATAGTTCTTTCTTCTT	NA	False	NA	14	True	TATAAA	-5	NA	69691966	69701854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701024_69701178_69701465
m54284U_201201_044215/147390478/ccs	chr5	+	5311	42	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_40	34.0963571440375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2013	False	NA	7	True	AATAAA	-8	NA	33021064	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33148085_33148169_33148282
m54284U_201201_044215/147392986/ccs	chr7	+	1519	11	NNC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	0	391	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_9	371.848033476042	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGCTGTCCCTTTGA	NA	False	NA	32	True	AATAAA	-22	NA	15832532	15851055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849527_15849576_15850388
m54284U_201201_044215/147521697/ccs	chr5	-	6280	30	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	152.672950212263	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGAAACGTGAATATTC	2957	False	NA	NA	False	AATAAA	-27	NA	65855300	65765112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65854105_65854281_65855092
m54284U_201201_044215/147521750/ccs	chr9	-	172	1	Antisense	novelGene_ENSMUSG00000110751.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATTAAATAACTGGAAC	NA	False	NA	NA	False	NA	NA	NA	121148458	121148286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_121148300_121148500
m54284U_201201_044215/147523531/ccs	chr4	+	1185	6	NNC	ENSMUSG00000028334.11	novel	2179	6	NA	NA	0	-957	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	357.435085015447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTGCTGTCCAGTG	3	True	NA	13	True	AATAAA	-26	NA	46489318	46502675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502400
m54284U_201201_044215/147523830/ccs	chr2	+	217	1	Intergenic	novelGene_1129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAATGTTTACCTGTTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	152719311	152719528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_152719300_152719500
m54284U_201201_044215/147523914/ccs	chr4	-	2338	1	Intergenic	novelGene_2332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTAAGAATGTATGACA	NA	False	NA	NA	False	NA	NA	NA	145517811	145515473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_145515500_145517800
m54284U_201201_044215/147588579/ccs	chr8	+	976	9	NNC	ENSMUSG00000002395.15	novel	973	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_7	305.824295960932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATGTCTTCAGTGCTAG	NA	False	NA	22	True	AATAAA	-23	NA	71819585	71822376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821772_71821948_71822170
m54284U_201201_044215/147589750/ccs	chr7	+	3347	6	NIC	ENSMUSG00000033961.17	novel	4615	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	4.88262224629348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTCTGCAGATGGG	NA	False	NA	NA	False	NA	NA	NA	12711774	12718267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12712146_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
m54284U_201201_044215/147652646/ccs	chr2	+	677	1	Genic_Genomic	ENSMUSG00000038085.14	novel	NA	NA	NA	NA	-448	-8402	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAATGAACCGATCCGCG	9546	False	NA	NA	False	NA	NA	NA	156153770	156154447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_156153800_156154400
m54284U_201201_044215/147653336/ccs	chr3	+	2911	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2112	13	NA	NA	0	0	multi-exon	FALSE	canonical	3	36	junction_12	330.503695169624	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89072123	89090072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
m54284U_201201_044215/147720045/ccs	chr9	-	192	1	Intergenic	novelGene_5150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGGCTCTGTAGTCGAA	NA	False	NA	NA	False	NA	NA	NA	120289009	120288817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_120288800_120289000
m54284U_201201_044215/147783988/ccs	chr2	+	4282	6	Fusion	ENSMUSG00000078864.11_ENSMUSG00000078866.11	novel	1077	4	NA	NA	0	2935	multi-exon	FALSE	canonical	3	56	junction_3	80.5466324559879	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACATTCCTTCCAAATT	NA	False	NA	NA	False	AATAAA	-38	NA	177156525	177415200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177156642_177404638_177404694_177405994_177406097_177409836_177409964_177410168_177410230_177411379
m54284U_201201_044215/147786519/ccs	chr2	-	1713	9	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	240.477617201685	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25911759	25888554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25889080_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
m54284U_201201_044215/147849747/ccs	chr10	+	169	1	Intergenic	novelGene_5418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAAAGACACTGTAGC	NA	False	NA	NA	False	NA	NA	NA	75800529	75800698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75800500_75800700
m54284U_201201_044215/147851131/ccs	chr17	-	5590	41	NNC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_36	62.5827002853025	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851601	24815462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847080_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
m54284U_201201_044215/147982266/ccs	chr5	-	1311	12	NNC	ENSMUSG00000039886.9	novel	1559	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	61	junction_11	191.865612403944	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGGACTGTGGATGTG	5303	False	NA	-4	True	AATAAA	-21	NA	135773062	135764338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772909
m54284U_201201_044215/148046567/ccs	chr2	+	4817	26	NIC	ENSMUSG00000035437.16	novel	4967	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	49.1926823826471	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCTTCATACAAAAGTA	1556	False	NA	7	True	ATTAAA	-18	NA	37333307	37456449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_37333469_37359527_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
m54284U_201201_044215/148047088/ccs	chr13	-	3278	12	NNC	ENSMUSG00000038212.17	novel	3832	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_8	142.903539101043	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGGCTTAAAAACAATTT	NA	False	NA	-15	True	AATAAA	-17	NA	65260789	65212959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226212_65229213_65229342_65234902_65234966_65243432_65243529_65260317
m54284U_201201_044215/148113828/ccs	chr19	+	4176	18	NIC	ENSMUSG00000024900.6	novel	4317	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_6	88.2494890542665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATCTGTCCCTGTCTCC	NA	False	NA	18	True	AATAAA	-20	NA	3373347	3435733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
m54284U_201201_044215/14813097/ccs	chr9	-	3362	10	NIC	ENSMUSG00000090626.10	novel	2054	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_5	66.6907363956019	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTGGTGAAATAAACAGA	7876	False	NA	-32	True	AATAAA	-14	NA	72399243	72368384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
m54284U_201201_044215/148177167/ccs	chr10	-	5719	17	NNC	ENSMUSG00000020130.10	novel	3752	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	115.805315481415	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTTTGTAGTTACTT	NA	False	NA	-2	True	ATTAAA	-21	NA	115087372	115035300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115052204_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
m54284U_201201_044215/148177391/ccs	chr19	+	3481	13	NNC	ENSMUSG00000015176.12	novel	3523	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_11	261.203451461797	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCAGAGTTATGTCGT	244	False	NA	13	True	AATAAA	-16	NA	46064408	46073969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072024_46072189_46072283_46072450
m54284U_201201_044215/148179397/ccs	chr16	+	1861	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_10	702.387962596171	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
m54284U_201201_044215/148242723/ccs	chr7	+	2394	8	NNC	ENSMUSG00000058454.16	novel	2556	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	134.821272469162	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_143384050_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
m54284U_201201_044215/148243934/ccs	chrX	+	712	6	NNC	ENSMUSG00000031226.14	novel	1239	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	559.074950252647	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGCCAGAGTTCCTTTT	NA	False	NA	5	True	AATAAA	-20	NA	104123380	104160696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104160432
m54284U_201201_044215/148308051/ccs	chr7	-	2767	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	198.945615746342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAACTATTTTGGTT	NA	False	NA	-11	True	AATAAA	-33	NA	34089112	34044070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34065039_34065163_34070479_34070610_34074653_34074818_34088782
m54284U_201201_044215/148374919/ccs	chr14	-	3212	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	0	-361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.786335702622	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAATACATTAATTTCT	NA	False	NA	-13	True	AATAAA	-27	NA	67953059	67914164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941490_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
m54284U_201201_044215/148375966/ccs	chr1	-	203	1	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAACCACCAGCCCAGAG	NA	False	NA	NA	False	NA	NA	NA	31033760	31033557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_31033600_31033800
m54284U_201201_044215/148505072/ccs	chr9	-	1069	7	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	701	junction_6	167.641151140033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6292	False	NA	-4	True	AATAAA	-15	NA	57065600	57062322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064423_57065555
m54284U_201201_044215/148507423/ccs	chr11	+	1729	6	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	0	-299	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4203.75149598546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3035	False	NA	-16	True	NA	NA	NA	75623738	75656372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_75623918_75642706_75642907_75646399_75646479_75647642_75647850_75650117_75650255_75655445
m54284U_201201_044215/148635745/ccs	chr1	-	1795	10	NNC	ENSMUSG00000026260.13	novel	2020	10	NA	NA	0	-207	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	399.927771256539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGCGTGGCAC	NA	False	NA	-20	True	AATAAA	-20	NA	92401489	92367207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395534_92397584_92397801_92398538_92398708_92401384
m54284U_201201_044215/148702256/ccs	chr2	+	2743	19	NIC	ENSMUSG00000039254.17	novel	2918	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	38.3467367871403	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATGTTATTTATTGA	NA	False	NA	17	True	AATAAA	-18	NA	32126683	32145017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
m54284U_201201_044215/148768609/ccs	chr12	+	6429	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	0	-199	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	42.7865791811485	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116369021	116427152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
m54284U_201201_044215/148768812/ccs	chr1	+	3948	5	NNC	ENSMUSG00000026502.14	novel	8802	5	NA	NA	134	1697	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	72.980733758986	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATAGTTCTTTCTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	178015231	178080164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_178015524_178065477_178065551_178070177_178070272_178071923_178072049_178076800
m54284U_201201_044215/14876952/ccs	chr4	-	188	1	Intergenic	novelGene_2401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGACTACAGTCAACTCG	NA	False	NA	NA	False	NA	NA	NA	150623197	150623009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_150623000_150623200
m54284U_201201_044215/14878602/ccs	chr6	-	2557	12	NNC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_11	1507.73835882678	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8576	False	NA	-24	True	AATAAA	-16	NA	145021819	144944883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145002586_145002679_145021614
m54284U_201201_044215/14878967/ccs	chr17	+	2786	5	NIC	ENSMUSG00000024014.9	novel	2698	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1677	junction_3	126.19429464124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGTTTTCCATTCATT	NA	False	NA	17	True	AATAAA	-18	NA	29709726	29715086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29710200_29710298_29710545_29710638_29711006_29712695_29712873_29713563
m54284U_201201_044215/14879014/ccs	chr19	+	6431	8	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	0	790	intron_retention	FALSE	canonical	3	26	junction_7	29.110626434836	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGAGTGACTCTTGTT	NA	False	NA	5	True	NA	NA	NA	41471075	41575765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41570216
m54284U_201201_044215/148832462/ccs	chr7	-	1934	12	ISM	ENSMUSG00000041375.20	ENSMUST00000118976.10	2175	14	10	1432	0	0	5prime_fragment	FALSE	canonical	3	130	junction_1	29.1238449918179	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGACACCCACCCCACT	NA	False	NA	-14	True	AATAAA	-14	NA	16020705	16009401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
m54284U_201201_044215/148833500/ccs	chr11	-	182	1	Intergenic	novelGene_6308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGCTGGTGAGATGGCTC	4514	False	NA	NA	False	NA	NA	NA	98770862	98770680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_98770700_98770900
m54284U_201201_044215/148834484/ccs	chr1	+	159	1	Intergenic	novelGene_210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTGTTTCATAAATACT	NA	False	NA	NA	False	NA	NA	NA	81265391	81265550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_81265400_81265600
m54284U_201201_044215/148834755/ccs	chr9	+	3083	11	NNC	ENSMUSG00000046603.17	novel	3049	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	7.24499827467198	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGTTCCAGGATTTCCA	NA	False	NA	22	True	AATAAA	-22	NA	122634667	122665399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_122634852_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
m54284U_201201_044215/148900267/ccs	chr5	+	2678	18	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	26.7032908822983	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGTTTTACGGTCCCTG	1513	False	NA	39	True	ATTAAA	-41	NA	35915223	36041493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36006147_36006250_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
m54284U_201201_044215/149030782/ccs	chr17	-	3684	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	337	junction_20	102.590886534818	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5674	False	NA	-17	True	TATAAA	-18	NA	25946393	25938019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
m54284U_201201_044215/149095537/ccs	chr6	+	181	1	Intergenic	novelGene_3131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGTATTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	29638149	29638330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29638100_29638300
m54284U_201201_044215/149095927/ccs	chr16	+	1279	7	NIC	ENSMUSG00000000884.18	novel	3549	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	97.958182688102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTCAAGGTGGGAAC	NA	False	NA	15	True	AATAAA	-17	NA	18317627	18383290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_18317702_18317795_18317891_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
m54284U_201201_044215/149161047/ccs	chr17	-	169	1	Intergenic	novelGene_8727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	74863077	74862908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_74862900_74863100
m54284U_201201_044215/149226074/ccs	chr2	+	5067	8	NIC	ENSMUSG00000027281.17	novel	2723	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	7.17990392750232	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTGTGCAATTT	9361	False	NA	15	True	AATAAA	-23	NA	136733137	136913870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_136733310_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
m54284U_201201_044215/149226404/ccs	chr10	+	1666	3	NNC	ENSMUSG00000037171.7	novel	2095	3	NA	NA	1447	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	139.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCTCACAATGTGTT	NA	False	NA	20	True	ATTAAA	-17	NA	61255197	61261117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_61255293_61258760_61259477_61260262
m54284U_201201_044215/149226614/ccs	chr8	-	4265	8	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2143	junction_1	124.199641788566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634433	122607888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
m54284U_201201_044215/149226839/ccs	chr17	-	216	1	Intergenic	novelGene_8749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTGTTTTTTTTAAGC	NA	False	NA	NA	False	NA	NA	NA	80944462	80944246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_80944200_80944500
m54284U_201201_044215/149291451/ccs	chr15	-	2217	9	NIC	ENSMUSG00000022992.18	novel	1980	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	395.612954003026	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432145	98416700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
m54284U_201201_044215/149292218/ccs	chr15	-	2197	7	NNC	ENSMUSG00000000489.8	novel	2944	7	NA	NA	214	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_6	4.63381292481928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGAATCTGTGTGTTG	NA	False	NA	NA	False	AAAAAG	-14	NA	79897190	79880074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79881459_79881756_79881906_79884529_79884675_79885882_79886089_79887525_79887616_79889669_79889767_79897064
m54284U_201201_044215/149292984/ccs	chr15	+	167	1	Intergenic	novelGene_7657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATACTAAGTC	NA	False	NA	NA	False	NA	NA	NA	25545403	25545570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_25545400_25545600
m54284U_201201_044215/149293294/ccs	chr9	+	3931	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	74.5949607095902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19557997
m54284U_201201_044215/149293809/ccs	chr4	+	2100	14	NNC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	-214	-1750	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1239.01577660438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTTGTATTTCTTT	2167	False	NA	13	True	NA	NA	NA	140428569	140448781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_140428691_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
m54284U_201201_044215/149356590/ccs	chr1	-	2517	4	NIC	ENSMUSG00000058407.13	novel	1699	5	NA	NA	0	-52	intron_retention	FALSE	canonical	3	195	junction_3	299.689098159335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATTTTTGTGATTGA	NA	False	NA	-8	True	TTTAAA	-20	NA	38036324	38026528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_38026861_38029283_38029539_38033072_38034923_38036244
m54284U_201201_044215/149357869/ccs	chr11	+	3792	12	NIC	ENSMUSG00000020271.18	novel	3938	13	NA	NA	0	94	combination_of_known_splicesites	FALSE	canonical	3	198	junction_1	77.7587921206735	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTGCTAAGTAATGTCA	NA	False	NA	-15	True	AATAAA	-25	NA	32592783	32696663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
m54284U_201201_044215/149359450/ccs	chr7	+	1926	6	NIC	ENSMUSG00000015957.13	novel	1844	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	6.20966987850401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAAGTGTGTGAAATAA	NA	False	NA	NA	False	NA	NA	NA	98484318	98503018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_98484556_98488214_98488398_98495580_98495817_98496380_98496659_98499433_98499727_98502319
m54284U_201201_044215/149423606/ccs	chr8	-	188	1	Intergenic	novelGene_4327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAACAATTTCTCTGGA	NA	False	NA	NA	False	NA	NA	NA	71120620	71120432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_71120400_71120600
m54284U_201201_044215/149424332/ccs	chr4	+	174	1	Intergenic	novelGene_2113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGACAAAA	NA	False	NA	NA	False	NA	NA	NA	126116736	126116910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126116700_126116900
m54284U_201201_044215/14943846/ccs	chr1	+	2633	3	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	482.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160865843_160866026
m54284U_201201_044215/14944359/ccs	chr17	-	5239	7	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	122	junction_2	146.247981942392	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343295	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46329806_46331916_46332049_46333202_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
m54284U_201201_044215/149487907/ccs	chr18	-	2758	9	NIC	ENSMUSG00000037013.18	novel	2911	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	296.915812984085	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-19	True	AATAAA	-17	NA	14815835	14758685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_14760369_14766599_14766734_14769552_14769676_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
m54284U_201201_044215/149489896/ccs	chr7	-	4902	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	-13	-1203	0	1203	intron_retention	FALSE	canonical	3	1102	junction_8	1132.63140517999	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110682237	110669935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201201_044215/149490014/ccs	chr2	+	2738	15	NNC	ENSMUSG00000026748.14	novel	6947	14	NA	NA	-254	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	14.5140677711421	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGGTTCAAATGTTC	4091	False	NA	14	True	AATAAA	-27	NA	16360860	16756500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_16360983_16361295_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
m54284U_201201_044215/149554533/ccs	chr3	-	1422	13	NNC	ENSMUSG00000068921.15	novel	1409	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	242.742948175408	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88858488	88830941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858447
m54284U_201201_044215/149555433/ccs	chr6	-	200	1	Intergenic	novelGene_3464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTGAAGACCAAAGAAGC	NA	False	NA	NA	False	NA	NA	NA	120534393	120534193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120534200_120534400
m54284U_201201_044215/149555943/ccs	chr9	+	2533	7	NNC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	146.235445619575	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGAGTTTGTGTACAG	NA	False	NA	16	True	AATAAA	-21	NA	20927280	20940113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20937896_20938373_20938632_20938727_20938975_20939066
m54284U_201201_044215/149685403/ccs	chr16	-	3224	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	56	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	401.462098244069	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAATACTTGGTTTAAA	NA	False	NA	-8	True	AATAAA	-8	NA	15455208	15441973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
m54284U_201201_044215/149686046/ccs	chr1	+	1451	9	ISM	ENSMUSG00000050122.20	ENSMUST00000238425.2	4095	29	71280	46269	-55	0	internal_fragment	TRUE	canonical	3	35	junction_7	9.96164519544839	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGATTTCTCCCTCA	NA	False	NA	5	True	AATAAA	-22	NA	37139693	37180417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_37139908_37148076_37148232_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
m54284U_201201_044215/149686407/ccs	chr15	-	177	1	Intergenic	novelGene_7758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAATTAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	73392281	73392104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_73392100_73392300
m54284U_201201_044215/149751053/ccs	chr19	+	6067	34	NIC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_28	7.35034340758079	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCTTTTCTTTTA	NA	False	NA	63	True	AATAAA	-18	NA	26584669	26755721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26737277_26737332_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
m54284U_201201_044215/149751325/ccs	chr2	-	2607	5	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	133	-124	intron_retention	FALSE	canonical	3	1968	junction_1	228.570968191501	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCAGTGCCGCCTTTGT	8358	False	NA	-3	True	AATAAA	-21	NA	132095101	132091205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_132091616_132091693_132093359_132093610_132093679_132093822_132093921_132094735
m54284U_201201_044215/149751676/ccs	chr12	+	3140	5	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-389	8657	0	-123	5prime_fragment	FALSE	canonical	3	40	junction_4	60.7345659406569	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAAGAGTGTTAATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	3285525	3291287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833
m54284U_201201_044215/149751965/ccs	chr6	+	2148	3	NNC	ENSMUSG00000058446.15	novel	397	4	NA	NA	-316	-4802	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTTATGTGAATGAAGC	NA	False	NA	NA	False	NA	NA	NA	54793584	54850604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_54794458_54840884_54840981_54849425
m54284U_201201_044215/149817319/ccs	chr17	-	2946	7	NIC	ENSMUSG00000024222.18	novel	3858	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_6	192.900377282046	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCATTGTTCATGGCT	NA	False	NA	-14	True	AATAAA	-15	NA	28637501	28618070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28637368
m54284U_201201_044215/149817875/ccs	chr13	-	2718	3	NNC	ENSMUSG00000094499.4	novel	3029	10	NA	NA	0	-22804	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGTTGTCTTGTCATTA	NA	False	NA	-5	True	AATAAA	-15	NA	66549932	66522016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_66524440_66528836_66529024_66549824
m54284U_201201_044215/149882396/ccs	chr17	-	195	1	Intergenic	novelGene_8619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCCAAAGTAGGTCTGG	NA	False	NA	NA	False	NA	NA	NA	47044216	47044021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_47044000_47044200
m54284U_201201_044215/149946943/ccs	chr2	+	5171	22	NIC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	43.3799853532905	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	1678	False	NA	17	True	AATAAA	-21	NA	5956279	6061514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051711_6051877_6055148_6055291_6056319_6056441_6060243
m54284U_201201_044215/149947962/ccs	chr2	-	2002	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	17.6150503831241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	0	True	AATAAA	-20	NA	59712935	59682707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
m54284U_201201_044215/149947988/ccs	chr4	+	4715	14	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	42.5459028127721	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTTGTGTGGTGTCTA	2553	False	NA	12	True	ATTAAA	-13	NA	102971627	103022946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_102971717_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
m54284U_201201_044215/149948409/ccs	chr14	-	1058	6	NIC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	1674.27851924344	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTTCCAAATAAAGGG	NA	False	NA	NA	False	TTTAAA	-23	NA	31923855	31902174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31923599
m54284U_201201_044215/149948630/ccs	chr10	-	4094	12	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	345	junction_11	33.6562594720936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332176	81322290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
m54284U_201201_044215/150013151/ccs	chr6	-	177	1	Intergenic	novelGene_3589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	148882958	148882781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148882800_148883000
m54284U_201201_044215/150013622/ccs	chr16	+	181	1	Intergenic	novelGene_8105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAAGGAGGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	17326112	17326293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17326100_17326300
m54284U_201201_044215/150077910/ccs	chr11	+	1229	5	NIC	ENSMUSG00000090266.11	novel	1276	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_2	48.2668364407696	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACTCCCAATCATTAAA	8975	False	NA	15	True	ATTAAA	-17	NA	116734410	116740566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_116734601_116736588_116736772_116739079_116739185_116739726_116740127_116740215
m54284U_201201_044215/150079664/ccs	chr3	+	2315	7	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	1324.72848371112	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87813627	87823439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87814022_87820397_87820475_87820619_87820759_87821147_87821218_87821358_87821545_87821779_87821998_87822208
m54284U_201201_044215/15008806/ccs	chr16	+	1868	11	NNC	ENSMUSG00000022884.17	novel	1737	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	738.769551348727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
m54284U_201201_044215/15008937/ccs	chr18	-	3189	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	75.5925550236265	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602573_70602849_70604743_70605051_70605361
m54284U_201201_044215/150143958/ccs	chr5	-	4027	25	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	48	junction_13	210.643421548518	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201201_044215/150144916/ccs	chr3	+	5656	18	NIC	ENSMUSG00000007379.16	novel	4879	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	218	junction_1	24.0141250244943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009975	103077054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_103010055_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
m54284U_201201_044215/150145655/ccs	chr10	+	8235	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	36.3191629477088	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGATGTTACAGTTCT	NA	False	NA	13	True	ATTAAA	-14	NA	66932270	67092097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
m54284U_201201_044215/150208593/ccs	chr14	+	1612	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	0	496	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	78.3207436691512	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398257	20418631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20417913
m54284U_201201_044215/150210825/ccs	chr19	-	8236	15	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	653	junction_6	77.6049651262398	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5476	False	NA	-12	True	AATAAA	-13	NA	45771990	45738697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
m54284U_201201_044215/150211405/ccs	chr16	+	1180	1	FSM	ENSMUSG00000071637.6	ENSMUST00000096232.6	3746	1	1	2565	1	-1515	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTCCTATGTTCATT	NA	False	NA	8	True	AATAAA	-17	NA	15705150	15706330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_15705200_15706300
m54284U_201201_044215/150341596/ccs	chr8	-	2271	2	ISM	ENSMUSG00000031959.16	ENSMUST00000211981.2	3618	27	41971	24428	10737	12216	internal_fragment	FALSE	canonical	3	67	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTGCTGCCACCCATGCT	NA	False	NA	NA	False	NA	NA	NA	112206648	112201267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_112202830_112205939
m54284U_201201_044215/150341841/ccs	chr6	-	173	1	Intergenic	novelGene_3148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATTGGTGCCAC	NA	False	NA	NA	False	NA	NA	NA	30058688	30058515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_30058500_30058700
m54284U_201201_044215/150342155/ccs	chr15	+	1885	3	ISM	ENSMUSG00000022303.10	ENSMUST00000227368.2	1825	4	8156	0	8144	0	3prime_fragment	FALSE	canonical	3	10	junction_1	7	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCCTTGATCATGTGA	NA	False	NA	6	True	NA	NA	NA	39617483	39624330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_39618622_39622877_39623019_39623724
m54284U_201201_044215/150342311/ccs	chr11	+	6444	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_16	42.866617256322	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9349	False	NA	9	True	AATAAA	-17	NA	107437686	107577769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
m54284U_201201_044215/150405557/ccs	chr6	+	5634	29	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	intron_retention	FALSE	canonical	3	253	junction_1	40.3573798981661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185055	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201201_044215/150406545/ccs	chr4	+	2520	7	NNC	ENSMUSG00000028646.17	novel	2950	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	193.739014025455	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGTTTGTTGTGTGAT	NA	False	NA	16	True	AATAAA	-16	NA	123811266	123830786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818580_123818683_123823624_123823774_123829330
m54284U_201201_044215/150406612/ccs	chr9	+	4010	16	NNC	ENSMUSG00000031918.17	novel	3088	16	NA	NA	0	2428	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_15	101.361311926965	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGAGGTCTTGCTATGTTC	NA	False	NA	NA	False	AATAAA	-28	NA	13660480	13720205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670_13718567_13719997
m54284U_201201_044215/150406755/ccs	chrX	+	4159	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_15	294.404164593807	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201201_044215/150407858/ccs	chr2	+	2806	15	NIC	ENSMUSG00000027255.15	novel	3068	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	197	junction_9	19.8341336373147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCCTCTCCGTCCTGCCT	5852	False	NA	NA	False	AATAAA	-25	NA	91095668	91107276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
m54284U_201201_044215/150602139/ccs	chr15	-	2667	11	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	165.344156231782	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8019	False	NA	-4	True	AATAAA	-24	NA	79326337	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326292
m54284U_201201_044215/150603324/ccs	chr6	+	1818	6	NIC	ENSMUSG00000029836.16	novel	498	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	931.996351924191	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447725	51460684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_51447865_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
m54284U_201201_044215/150604129/ccs	chr2	+	2617	24	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	107.960872979603	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266284	130285654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283536_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
m54284U_201201_044215/150604579/ccs	chr11	+	3284	14	NIC	ENSMUSG00000020888.17	novel	2968	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	488	junction_4	31.2714778263482	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGCCTCTGGCTCC	7135	False	NA	12	True	AATAAA	-16	NA	69891420	69900937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899822_69899969
m54284U_201201_044215/150734331/ccs	chr2	-	177	1	Genic_Genomic	ENSMUSG00000084843.2	novel	NA	NA	NA	NA	15236	18	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTACTCCTTTTCAACTTG	NA	False	NA	NA	False	NA	NA	NA	180012442	180012265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_180012300_180012400
m54284U_201201_044215/150734439/ccs	chr16	-	2915	23	NNC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	69.1690497116776	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201201_044215/150735527/ccs	chr17	+	1138	3	NNC	ENSMUSG00000055760.13	novel	1134	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_1	120	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATATTTCTATTCTTAA	NA	False	NA	39	True	ATTAAA	-30	NA	80531869	80535926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_80532104_80533049_80533194_80535166
m54284U_201201_044215/15076137/ccs	chr19	+	189	1	Intergenic	novelGene_9080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGAAAAAGAAACCAAAC	6490	False	NA	NA	False	NA	NA	NA	4309022	4309211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4309000_4309200
m54284U_201201_044215/1507848/ccs	chr5	-	1060	4	NNC	ENSMUSG00000044339.13	novel	1073	4	NA	NA	-2525	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_3	211.98480029369	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGGGTGTGTGCA	5453	False	NA	-2	True	AATAAA	-22	NA	114268804	114261986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_114262316_114263592_114263792_114265586_114265831_114268516
m54284U_201201_044215/1508141/ccs	chr6	+	1192	9	NIC	ENSMUSG00000029993.17	novel	1195	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	210	junction_1	876.96265598941	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCTTCCTCTCACGAA	NA	False	NA	25	True	AATAAA	-31	NA	86986217	87005443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
m54284U_201201_044215/150864394/ccs	chr11	+	4272	22	NIC	ENSMUSG00000017119.21	novel	4339	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_20	58.2924832670746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	987	False	NA	21	True	AATAAA	-24	NA	101443692	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468757_101468864_101471410
m54284U_201201_044215/150864597/ccs	chr5	-	1546	6	NIC	ENSMUSG00000029128.13	novel	1635	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_4	194.631549343882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTGGGATTTTCATT	NA	False	NA	-4	True	AATAAA	-14	NA	41865497	41782318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41860780_41860878_41865247
m54284U_201201_044215/150865418/ccs	chr2	-	5493	1	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	1162	-96	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAATGCAGGCTTA	NA	False	NA	NA	False	AATAAA	-14	NA	106798460	106792967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_106793000_106798500
m54284U_201201_044215/150929747/ccs	chr17	-	2427	11	NNC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	72	junction_9	3282.20513679447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884197	45878700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882453_45882690_45882838_45884092
m54284U_201201_044215/150931407/ccs	chr12	-	219	1	Antisense	novelGene_ENSMUSG00000090812.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATATATTGCCTCATTT	7950	False	NA	NA	False	NA	NA	NA	87255954	87255735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_-_87255700_87256000
m54284U_201201_044215/1509553/ccs	chr18	-	185	1	Intergenic	novelGene_9031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAAGCTTATGCTCATTT	5958	False	NA	NA	False	NA	NA	NA	77456234	77456049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77456000_77456200
m54284U_201201_044215/1509599/ccs	chr4	-	3813	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	119	junction_12	64.3806437056249	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
m54284U_201201_044215/150996423/ccs	chr14	-	5898	7	NNC	ENSMUSG00000021978.10	novel	6013	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	52.5346446536844	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGGAGGTGTTTTG	NA	False	NA	-3	True	NA	NA	NA	65335554	65289511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313107_65315639_65317828_65317925_65335445
m54284U_201201_044215/1509970/ccs	chr8	+	1160	5	NNC	ENSMUSG00000031818.13	novel	765	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	102	junction_1	3794.77660739074	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395046	121400946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_121395596_121396047_121396122_121399463_121399632_121399959_121400092_121400709
m54284U_201201_044215/1510220/ccs	chr1	+	177	1	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAACACAGACTGTGAT	NA	False	NA	NA	False	NA	NA	NA	13188444	13188621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_13188400_13188600
m54284U_201201_044215/151063129/ccs	chr12	-	176	1	Intergenic	novelGene_6577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAAAGAACAT	NA	False	NA	NA	False	NA	NA	NA	17642902	17642726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_17642700_17642900
m54284U_201201_044215/151063266/ccs	chrX	-	3920	29	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	798	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	148.257910963514	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223651	59101315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59126519_59126598_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
m54284U_201201_044215/151127862/ccs	chr16	-	175	1	Intergenic	novelGene_8181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGGTTTATTT	NA	False	NA	NA	False	NA	NA	NA	30241246	30241071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_30241100_30241200
m54284U_201201_044215/151193244/ccs	chr9	-	172	1	Intergenic	novelGene_5038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAAAAAAAATGAGCCG	NA	False	NA	NA	False	NA	NA	NA	100929544	100929372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_100929400_100929500
m54284U_201201_044215/151193330/ccs	chr9	-	2810	17	NIC	ENSMUSG00000035047.10	novel	2598	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_10	27.6433055865249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCCCCATCCCTTCCCA	NA	False	NA	-9	True	AATAAA	-19	NA	21199265	21184752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
m54284U_201201_044215/151259857/ccs	chr8	+	2567	12	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_7	313.356977010761	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2103	False	NA	94	True	AATAAA	-24	NA	13388750	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421079_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201201_044215/151324100/ccs	chr17	-	199	1	Intergenic	novelGene_8649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATAAATCCATGTGGTCT	NA	False	NA	NA	False	NA	NA	NA	54833865	54833666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_54833700_54833900
m54284U_201201_044215/151388364/ccs	chr2	-	181	1	Intergenic	novelGene_702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTGGCTGGAATG	8883	False	NA	NA	False	NA	NA	NA	31472317	31472136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31472100_31472300
m54284U_201201_044215/151389461/ccs	chr15	-	4506	28	NIC	ENSMUSG00000023008.19	novel	4423	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	12.2696051230895	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCTTGCACCAAGCTGT	NA	False	NA	-17	True	CATAAA	-17	NA	99268363	99215105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99226974_99227058_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
m54284U_201201_044215/151389604/ccs	chr4	-	178	1	Intergenic	novelGene_1845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAAGATGCGTGTT	NA	False	NA	NA	False	NA	NA	NA	45262676	45262498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_45262500_45262700
m54284U_201201_044215/151390428/ccs	chr4	+	999	6	NIC	ENSMUSG00000028863.14	novel	1054	8	NA	NA	0	379	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	120.208818312135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCATCAACAGATTCTT	NA	False	NA	14	True	ATTAAA	-20	NA	124978956	124997675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_124997222
m54284U_201201_044215/15140143/ccs	chr16	+	1261	3	NNC	ENSMUSG00000022516.11	novel	1618	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_1	233.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTTCTGAGTGCCA	95	False	NA	12	True	AATAAA	-18	NA	4756975	4758883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_4757158_4757247_4757503_4758059
m54284U_201201_044215/15141406/ccs	chr3	+	6842	17	NNC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	70.0775240358847	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130890	22269457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_22131119_22143576_22143668_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
m54284U_201201_044215/151520398/ccs	chr7	-	3692	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	48.403264694211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732208	121706487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728896_121728957_121731942
m54284U_201201_044215/151521203/ccs	chr7	+	1964	10	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	261.52010521583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835206	63861175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851584_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
m54284U_201201_044215/151521270/ccs	chr17	-	3424	15	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	268.032171386121	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226939	29189853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29217765_29217869_29218982_29219116_29226684
m54284U_201201_044215/151586196/ccs	chrX	+	2369	15	ISM	ENSMUSG00000031385.15	ENSMUST00000002079.7	6030	35	10378	0	1946	0	3prime_fragment	FALSE	canonical	0	0	junction_1	1.4638501094228	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAAGCCCCTGACTTT	NA	False	NA	NA	False	AATAAA	-31	NA	72811082	72816120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_+_72811279_72811386_72811488_72811563_72811788_72811945_72812125_72812295_72812363_72812739_72813068_72813207_72813312_72813395_72813493_72813861_72814041_72814184_72814346_72814700_72814849_72815016_72815082_72815148_72815225_72815351_72815427_72815751
m54284U_201201_044215/151651066/ccs	chr17	+	3125	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	-94	-804	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	132.927611879549	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCTGTCTCAA	NA	False	NA	22	True	TATAAA	-16	NA	56347344	56375028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371973_56372426_56374406
m54284U_201201_044215/152044872/ccs	chr1	+	1550	2	Intergenic	novelGene_330	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTGCTCTCGTGTGTGT	2807	False	NA	NA	False	NA	NA	NA	134427572	134429160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_134428627_134428664
m54284U_201201_044215/152045745/ccs	chr2	-	6142	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	34.9539771880397	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8072	False	NA	-5	True	AATAAA	-26	NA	121101888	121028731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078011_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
m54284U_201201_044215/15204736/ccs	chrX	+	186	1	Intergenic	novelGene_9616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCAGAGGGGGCATGCA	NA	False	NA	NA	False	NA	NA	NA	114020626	114020812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_114020600_114020800
m54284U_201201_044215/15206393/ccs	chr1	-	177	1	Intergenic	novelGene_344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAATTCCAAAAAAAAT	NA	False	NA	-1	True	NA	NA	NA	135733870	135733693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_135733700_135733900
m54284U_201201_044215/15206753/ccs	chr10	+	2273	7	NIC	ENSMUSG00000038160.8	novel	2352	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	114.808536267997	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATGTGGTGGCTCA	NA	False	NA	NA	False	AATAAA	-18	NA	44144353	44240287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_44144581_44162027_44162194_44165858_44165987_44179562_44179726_44195455_44195551_44222952_44223071_44238911
m54284U_201201_044215/152109511/ccs	chr13	+	1970	12	NIC	ENSMUSG00000041632.8	novel	1849	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_6	174.354630538115	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGTGGTGTGATTT	NA	False	NA	20	True	AATAAA	-15	NA	99481295	99552070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99537777_99537901_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
m54284U_201201_044215/152111823/ccs	chr4	+	2762	5	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.1731944953718	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_147637884_147646898_147646979_147661528_147661587_147665716_147665826_147667290
m54284U_201201_044215/152175269/ccs	chr6	-	2920	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_15	78.5898918039082	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	146479278	146451138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146477722_146477959_146478798
m54284U_201201_044215/152240335/ccs	chr4	+	4996	19	NIC	ENSMUSG00000028528.18	novel	5127	20	NA	NA	66	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	23.5903830583462	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	NA	False	NA	7	True	ATTAAA	-15	NA	101353910	101499996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_101353961_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
m54284U_201201_044215/152241325/ccs	chr6	+	172	1	Intergenic	novelGene_3575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTTTAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	146250408	146250580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_146250400_146250600
m54284U_201201_044215/152242455/ccs	chr4	+	5011	21	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_13	175.703841733754	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/152306739/ccs	chr13	-	211	1	Intergenic	novelGene_6975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTATGGCTAGGCAGGT	NA	False	NA	NA	False	NA	NA	NA	14701664	14701453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_14701500_14701700
m54284U_201201_044215/152306936/ccs	chr3	-	3831	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-245	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	261.982517558277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3507	False	NA	-4	True	AATATA	-14	NA	89959822	89907844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/152308286/ccs	chr1	+	301	2	NIC	ENSMUSG00000097398.3	novel	358	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACTTGGTCTTGGCTCCTT	NA	False	NA	17	True	NA	NA	NA	88682675	88683458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_88682774_88683255
m54284U_201201_044215/152372399/ccs	chr4	-	182	1	Intergenic	novelGene_1888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGGATTCGTTCCAGC	NA	False	NA	NA	False	NA	NA	NA	59620015	59619833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_59619800_59620000
m54284U_201201_044215/152437952/ccs	chr4	-	1969	6	NNC	ENSMUSG00000041153.10	novel	2658	6	NA	NA	0	-687	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	43.3912433562349	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCAGTGTATTGGCTTG	-1	True	NA	-4	True	ATTAAA	-17	NA	16013821	15997913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013515
m54284U_201201_044215/152503537/ccs	chr16	-	3222	24	NNC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_22	39.8562160573743	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTTGCTGTTTGTC	9984	False	NA	-12	True	NA	NA	NA	13720995	13652018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702493_13705560_13705635_13720778
m54284U_201201_044215/152568400/ccs	chr5	-	1788	15	NNC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_2	223.898722093499	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCCTGTTGAGTCCT	NA	False	NA	1	True	AATAAA	-22	NA	143951695	143924726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_143925068_143927455_143927579_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
m54284U_201201_044215/152568668/ccs	chr5	-	5542	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_4	41.2492424172857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844516	106764606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106844397
m54284U_201201_044215/152569659/ccs	chr2	+	2800	7	NIC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	0	intron_retention	FALSE	canonical	3	11761	junction_1	1836.78427481896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29952112	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29952293_29958280_29958339_29958971_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
m54284U_201201_044215/152570710/ccs	chr10	-	201	1	Intergenic	novelGene_5369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATATGTTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	66722523	66722322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_66722300_66722500
m54284U_201201_044215/152633780/ccs	chr11	+	9460	33	NIC	ENSMUSG00000032740.18	novel	9376	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_26	14.8739495427408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTGTTACAGTCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	29323657	29460808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
m54284U_201201_044215/152636028/ccs	chr4	+	1241	4	NNC	ENSMUSG00000078496.10	novel	1488	4	NA	NA	0	-3801	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	49.3716067751046	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCATCCGTTATTTCTGC	NA	False	NA	12	True	AAGAAA	-15	NA	147576873	147594076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_147577009_147578832_147578938_147591995_147592098_147593177
m54284U_201201_044215/152699346/ccs	chr19	-	175	1	Intergenic	novelGene_9177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAATGTG	NA	False	NA	NA	False	NA	NA	NA	21688009	21687834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_21687800_21688000
m54284U_201201_044215/152701478/ccs	chr8	-	5436	7	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	586	junction_1	32.9313258497471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419892	110397960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110399274_110402007_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201201_044215/15271780/ccs	chr10	+	1774	1	Antisense	novelGene_ENSMUSG00000001211.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	78185827	78187601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_78185800_78187600
m54284U_201201_044215/15272466/ccs	chr9	+	188	1	Intergenic	novelGene_4898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCCTCACATCTGGCA	4766	False	NA	NA	False	NA	NA	NA	66517384	66517572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_66517400_66517600
m54284U_201201_044215/152765715/ccs	chrX	-	296	1	Intergenic	novelGene_9374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTTTGTTTCCGA	NA	False	NA	NA	False	AATAAA	-6	NA	8092566	8092270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_8092300_8092600
m54284U_201201_044215/152830044/ccs	chr11	+	3772	14	NIC	ENSMUSG00000078676.10	novel	3741	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	81.375526611881	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTGGCCAGTTATTGT	282	False	NA	14	True	AATAAA	-19	NA	98700633	98724632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_98700918_98701284_98701313_98701723_98701793_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
m54284U_201201_044215/152830891/ccs	chr7	-	3990	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	0	1644	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	56.2259726461001	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713540	27686492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711922_27713445
m54284U_201201_044215/152832841/ccs	chr11	+	3028	27	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_18	127.767424615586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080743	29111680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
m54284U_201201_044215/152895520/ccs	chr17	+	153	1	Intergenic	novelGene_8483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTTTTTGAGACAG	2580	False	NA	3	True	NA	NA	NA	29271521	29271674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29271500_29271700
m54284U_201201_044215/152895543/ccs	chrX	+	177	1	Intergenic	novelGene_9731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGAAAAAGAAAATAT	NA	False	NA	NA	False	NA	NA	NA	162586461	162586638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_162586500_162586600
m54284U_201201_044215/152895579/ccs	chr2	-	191	1	Intergenic	novelGene_1250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCCTCGGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	167119857	167119666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_167119700_167119900
m54284U_201201_044215/152895956/ccs	chrX	+	4347	15	NIC	ENSMUSG00000031256.12	novel	4502	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_9	232.70004560483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTACTTAGAAATCTT	NA	False	NA	12	True	AATAAA	-12	NA	132960082	132987568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973163_132973224_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
m54284U_201201_044215/152896147/ccs	chr9	+	2405	5	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	967	junction_4	54.7106022631811	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914210	20920127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20919196_20919789
m54284U_201201_044215/152896346/ccs	chr2	+	7305	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-177	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_16	40.2682831275283	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4619	False	NA	33	True	AATAAA	-25	NA	20524424	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
m54284U_201201_044215/152963418/ccs	chr13	+	3550	10	NIC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	779	junction_1	57.8715051740588	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	54225887	54262361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
m54284U_201201_044215/152963553/ccs	chr12	-	2398	4	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_2	380.13886351642	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111638014_111638199_111638408_111638663
m54284U_201201_044215/153027348/ccs	chr8	-	362	1	Intergenic	novelGene_4462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCCATTTAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	107529498	107529136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107529100_107529500
m54284U_201201_044215/153029059/ccs	chrX	-	1725	10	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1767	junction_6	145.076225175289	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974423	72965726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
m54284U_201201_044215/153094284/ccs	chr17	+	3734	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	178.059739507092	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8820	False	NA	32	True	AATAAA	-33	NA	35354485	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201201_044215/153158102/ccs	chr8	+	4583	17	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	176	junction_6	26.2523064462915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247557	125278747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_125247691_125252369_125252532_125253838_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
m54284U_201201_044215/153158954/ccs	chr14	+	4377	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_39	179.139509432116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886767	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
m54284U_201201_044215/153158965/ccs	chr16	-	663	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	0	-42762	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	174.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTGAGTATCACTTTT	NA	False	NA	NA	False	NA	NA	NA	8610172	8566585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_8566919_8574679_8574937_8610099
m54284U_201201_044215/153289418/ccs	chr9	+	3631	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_22	51.5317642553865	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5736	False	NA	19	True	AATAAA	-19	NA	21249123	21266324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
m54284U_201201_044215/153290232/ccs	chr2	-	1348	5	NNC	ENSMUSG00000026849.19	novel	1401	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	240.429173562611	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGCTTTGTGTGTCTT	NA	False	NA	-8	True	TTTAAA	-30	NA	30857900	30850638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_30851210_30853486_30853607_30853705_30853882_30857101_30857368_30857685
m54284U_201201_044215/153355526/ccs	chr6	+	3126	3	NNC	ENSMUSG00000052751.17	novel	3138	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	12.5	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	21	True	AATAAA	-19	NA	48570833	48576016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_48570987_48571724_48571911_48573229
m54284U_201201_044215/153356401/ccs	chr17	-	2259	1	Intergenic	novelGene_8693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCAAAGTCTATTCTAAT	8365	False	NA	NA	False	NA	NA	NA	69266238	69263979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_69264000_69266200
m54284U_201201_044215/15337155/ccs	chrX	+	2349	16	NIC	ENSMUSG00000001127.13	novel	2439	17	NA	NA	0	0	combination_of_known_junctions	TRUE	non_canonical	1	66	junction_12	96.2243674382372	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	1123	False	NA	23	True	NA	NA	NA	20664052	20726758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20664121_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
m54284U_201201_044215/15337914/ccs	chr9	+	2708	11	NIC	ENSMUSG00000032307.17	novel	1680	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	245.384188569679	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCACCTTTCCCTCTT	NA	False	NA	10	True	AATAAA	-18	NA	55056678	55114813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_55057111_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
m54284U_201201_044215/153618024/ccs	chr6	-	195	1	Intergenic	novelGene_3358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTGAAAGCGCAATTAGT	9736	False	NA	NA	False	NA	NA	NA	85857693	85857498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_85857500_85857700
m54284U_201201_044215/153682453/ccs	chr19	-	2783	11	NIC	ENSMUSG00000037578.5	novel	3321	15	NA	NA	35314	0	intron_retention	FALSE	canonical	3	31	junction_8	12.458330546265	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTGCATTTCCTTCTG	873	False	NA	-1	True	AATAAA	-17	NA	44145567	44136075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
m54284U_201201_044215/153684364/ccs	chr2	+	4372	25	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_7	19.471489128695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178324	32197925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195888_32195988_32196096_32196171_32196329_32196417
m54284U_201201_044215/153749074/ccs	chr4	-	7483	35	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	0	0	intron_retention	FALSE	canonical	3	186	junction_31	91.1822768549719	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281945	156249746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
m54284U_201201_044215/153813432/ccs	chr7	+	1474	8	NNC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	168	junction_6	2164.64777735317	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGACCTCTTCCTGT	NA	False	NA	42	True	AATAAA	-30	NA	142606530	142621671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620887_142620971_142621048
m54284U_201201_044215/153813547/ccs	chr11	-	179	1	Intergenic	novelGene_6054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	5651	False	NA	NA	False	NA	NA	NA	77680342	77680163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_77680200_77680300
m54284U_201201_044215/153813657/ccs	chr12	-	4055	21	NNC	ENSMUSG00000020593.17	novel	4103	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_16	30.0886606548048	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGTTGCTTTACTTTG	7246	False	NA	-25	True	AATGAA	-13	NA	16639767	16587188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621261_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
m54284U_201201_044215/153813954/ccs	chr2	-	4177	20	NIC	ENSMUSG00000039671.19	novel	5093	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_8	168.212551861858	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165726568	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527
m54284U_201201_044215/153814342/ccs	chr11	+	1781	9	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_3	157.209205757805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70538779_70538854_70538936_70540046_70540121_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
m54284U_201201_044215/153879713/ccs	chr6	+	1727	11	NNC	ENSMUSG00000034083.17	novel	1752	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	55.3502484185934	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAGGAACTTGTTTCTT	NA	False	NA	12	True	TATAAA	-16	NA	91855055	91876824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875130_91875281_91876272
m54284U_201201_044215/153880245/ccs	chr6	-	2042	7	NIC	ENSMUSG00000004446.13	novel	2415	7	NA	NA	0	-265	combination_of_known_splicesites	FALSE	canonical	3	32	junction_5	439.124507780348	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893797	120870079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120883389_120883525_120893694
m54284U_201201_044215/153880514/ccs	chr19	+	108	1	Intergenic	novelGene_9062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAATGCCAGCAGCT	NA	False	NA	NA	False	NA	NA	NA	3365109	3365217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3365100_3365200
m54284U_201201_044215/153880966/ccs	chr3	-	177	1	Intergenic	novelGene_1711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATACATAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	143889561	143889384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_143889400_143889600
m54284U_201201_044215/153944183/ccs	chr11	+	3446	11	NNC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	109.765932784266	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9746	False	NA	12	True	AATAAA	-18	NA	44409809	44456347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442575_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
m54284U_201201_044215/153944772/ccs	chrX	+	901	7	NNC	ENSMUSG00000002014.13	novel	800	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_2	575.300621897418	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCTCCTGTGTCT	5432	False	NA	48	True	AATAAA	-30	NA	72830633	72834432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_72830913_72832440_72832560_72832660_72832760_72833405_72833481_72833636_72833727_72833964_72834031_72834259
m54284U_201201_044215/153945375/ccs	chr9	+	2007	7	ISM	ENSMUSG00000032320.8	ENSMUST00000147842.2	3080	8	25	2805	0	0	5prime_fragment	FALSE	canonical	1	1	junction_1	138.031900499687	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGCACCTGAGACATTT	973	False	NA	18	True	ATTAAA	-19	NA	55949153	55966361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_55949489_55949862_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
m54284U_201201_044215/153946326/ccs	chr8	+	5069	28	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	268	junction_15	54.3500567562735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
m54284U_201201_044215/153946521/ccs	chr17	+	2654	16	NIC	ENSMUSG00000041831.18	novel	2244	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	13.5522035928561	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAACTCCCAGCATTTAT	NA	False	NA	6	True	AATAAA	-15	NA	6930412	7005443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_6930610_6940859_6941395_6943610_6943830_6954660_6954726_6967051_6967104_6968636_6968704_6970278_6970358_6973292_6973418_6976495_6976631_6982782_6982962_6995637_6995741_7000350_7000522_7001864_7001971_7002776_7002874_7003809_7004016_7005125
m54284U_201201_044215/154010117/ccs	chr7	-	1722	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	200	junction_7	831.437710635419	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGAGGCCTCGGTTTTC	9881	False	NA	-13	True	NA	NA	NA	19449363	19435237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447832_19448217_19448286_19448905_19449185_19449282
m54284U_201201_044215/15401424/ccs	chr8	-	3219	12	NIC	ENSMUSG00000031948.15	novel	2008	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	1149	junction_8	195.358454180603	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCAGTGTTACTTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	112737955	112720074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
m54284U_201201_044215/15401711/ccs	chr18	-	2059	7	NNC	ENSMUSG00000024579.8	novel	2017	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_5	34.3693177121688	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGACTTATTCTTTTT	NA	False	NA	-1	True	TATAAA	-16	NA	61840706	61829907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836423_61836466_61836582_61836790_61840564
m54284U_201201_044215/15402817/ccs	chr2	-	175	1	Intergenic	novelGene_620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAGTAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	20956792	20956617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_20956600_20956800
m54284U_201201_044215/15403446/ccs	chr4	-	2640	14	NNC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	194.724049930412	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491418	94457403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478231_94491113
m54284U_201201_044215/154077673/ccs	chr9	+	3582	11	Fusion	ENSMUSG00000103970.2_ENSMUSG00000006673.15	novel	756	3	NA	NA	0	0	multi-exon	FALSE	canonical	3	12	junction_1	234.191481484703	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1659	False	NA	64	True	NA	NA	NA	108394797	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_+_108395176_108395901_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201201_044215/154140876/ccs	chr10	-	3991	11	NIC	ENSMUSG00000001783.4	novel	2009	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1317	junction_1	101.515959336451	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCTTCTCTTCCTGTG	NA	False	NA	-12	True	ATTAAA	-17	NA	85793687	85774500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85789369_85791582_85791662_85793478
m54284U_201201_044215/154140946/ccs	chr18	+	197	1	Intergenic	novelGene_8844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATCACATAAGAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	24702287	24702484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_24702300_24702500
m54284U_201201_044215/154206488/ccs	chr12	-	176	1	Intergenic	novelGene_6624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTGAAAAAAAAGAAAATATT	NA	False	NA	NA	False	NA	NA	NA	41670747	41670571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_41670600_41670700
m54284U_201201_044215/154206624/ccs	chr15	-	8907	6	NIC	ENSMUSG00000009575.15	novel	8803	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_5	209.116809463037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTGGTAGTTTGAAG	NA	False	NA	0	True	AATAAA	-22	NA	103148243	103099970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123448_103123553_103148159
m54284U_201201_044215/154206781/ccs	chr11	+	6279	33	NIC	ENSMUSG00000020721.17	novel	13147	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	39.9053567832691	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438781	107577769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
m54284U_201201_044215/154207800/ccs	chr12	+	4463	16	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_15	394.62378145379	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	False	NA	3	True	AATAAA	-17	NA	110413605	110549496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110546834
m54284U_201201_044215/154273787/ccs	chr5	-	197	1	Intergenic	novelGene_2904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTTATTCATTTTCCCC	NA	False	NA	NA	False	NA	NA	NA	124612827	124612630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124612600_124612800
m54284U_201201_044215/154338503/ccs	chr7	-	1970	5	NIC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	218.662268121411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866227	26858082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_26858637_26858948_26859017_26859712_26859833_26864044_26865154_26866108
m54284U_201201_044215/154339480/ccs	chr12	+	231	1	Intergenic	novelGene_6901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATTTTCTATATGCT	NA	False	NA	NA	False	AAAAAG	-33	NA	110733038	110733269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_110733000_110733300
m54284U_201201_044215/154403445/ccs	chr8	-	2817	13	ISM	ENSMUSG00000038225.16	ENSMUST00000136335.8	3943	14	-12	2435	0	266	5prime_fragment	FALSE	canonical	3	92	junction_6	20.4659269681749	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070247	47031631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
m54284U_201201_044215/154404667/ccs	chr18	-	699	4	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	0	122	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	1340.72318793503	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587577	36537135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_36537511_36565358_36565444_36584132_36584300_36587505
m54284U_201201_044215/154469793/ccs	chr4	+	4617	18	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	176.797344544714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/154470574/ccs	chr2	-	2422	14	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	48.1394670101744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145421	25137240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138498_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25145040_25145228
m54284U_201201_044215/154600828/ccs	chr19	-	2917	11	NNC	ENSMUSG00000024816.13	novel	4504	11	NA	NA	0	-1584	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	59.262888893472	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTTCCTATCACTG	4335	False	NA	-7	True	AATAAA	-14	NA	5925302	5901313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923362_5924737_5924823_5925118
m54284U_201201_044215/154665269/ccs	chr5	-	4310	13	NIC	ENSMUSG00000029405.17	novel	3026	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	686.531191126003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231122	92200022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92230608_92230712_92231005
m54284U_201201_044215/154666542/ccs	chr6	-	198	1	Intergenic	novelGene_3509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTTAGGGTACGGT	NA	False	NA	NA	False	AATAAA	-7	NA	125108182	125107984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_125108000_125108200
m54284U_201201_044215/154667144/ccs	chr8	+	2400	8	NIC	ENSMUSG00000031783.11	novel	1580	9	NA	NA	0	175	intron_retention	FALSE	canonical	3	1933	junction_4	91.1370351924697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTCATCGTGCCACTAAC	NA	False	NA	32	True	AATAAA	-23	NA	95584145	95590544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
m54284U_201201_044215/154667178/ccs	chr2	+	2651	10	NNC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	163.540533730447	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209570	112244585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236479_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
m54284U_201201_044215/154667191/ccs	chr19	+	168	1	Intergenic	novelGene_9064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTAAAAAGAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	3612568	3612736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3612600_3612700
m54284U_201201_044215/154667445/ccs	chr7	+	4274	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_20	54.5813379185559	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285674	35338651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321733_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
m54284U_201201_044215/15467361/ccs	chr5	+	3958	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_3	488.414344003707	951	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/15468678/ccs	chr8	+	226	1	Intergenic	novelGene_4621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATACAATAAAATGTTC	NA	False	NA	NA	False	NA	NA	NA	129898025	129898251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_129898000_129898300
m54284U_201201_044215/154730692/ccs	chr8	+	2620	13	NNC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	378.214225010113	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2103	False	NA	94	True	AATAAA	-24	NA	13388750	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13388807_13389664_13389740_13407042_13407110_13412268_13412378_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201201_044215/154731555/ccs	chr2	-	3781	5	NIC	ENSMUSG00000038914.16	novel	4613	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	74.9011849038451	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTATCCTTCTGTGT	NA	False	NA	-7	True	TTTAAA	-31	NA	180351792	180322850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_180325822_180326756_180326970_180329268_180329591_180333656_180333842_180351702
m54284U_201201_044215/154796295/ccs	chr2	-	192	1	Intergenic	novelGene_1018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTGGGCTGTCATGC	NA	False	NA	NA	False	NA	NA	NA	120459016	120458824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_120458800_120459000
m54284U_201201_044215/154797800/ccs	chr2	+	1587	12	NIC	ENSMUSG00000027523.21	novel	3903	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	236.631666212588	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174169549	174188537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
m54284U_201201_044215/154861796/ccs	chr13	-	1524	4	NNC	ENSMUSG00000113623.2	novel	633	4	NA	NA	0	419	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	48.0300831655421	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACGTATAAAACTTTGG	NA	False	NA	NA	False	ATTAAA	-24	NA	62564857	62549887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_62551118_62555228_62555290_62555482_62555610_62564751
m54284U_201201_044215/154927156/ccs	chr6	-	1896	5	NIC	ENSMUSG00000030316.14	novel	531	2	NA	NA	0	813	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	182.283433147393	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATGTGTGCAAATGTT	NA	False	NA	-1	True	ATTAAA	-19	NA	115014837	115007425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_115008724_115009180_115009274_115011116_115011212_115011911_115012095_115014610
m54284U_201201_044215/154927667/ccs	chr9	+	4256	23	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	107.922655576931	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974184	80051453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_79974855_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
m54284U_201201_044215/154927738/ccs	chr17	-	3205	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_5	22.8508205541945	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181445	22145940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22172962_22181236
m54284U_201201_044215/154929844/ccs	chr17	-	1843	2	Intergenic	novelGene_8403	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCAGCAAGTTTGAGTC	9564	False	NA	-22	True	AATAAA	-17	NA	24241825	24239894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24240269_24240356
m54284U_201201_044215/154992832/ccs	chr1	-	2581	13	NNC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	304.428004168838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624067	177590741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611718_177612461_177612565_177623777
m54284U_201201_044215/154992952/ccs	chr11	-	2242	1	Antisense	novelGene_ENSMUSG00000044949.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGCATGGTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	32467236	32464994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_32465000_32467200
m54284U_201201_044215/154993006/ccs	chr15	+	3328	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	40.2403976123497	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193119	99214899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
m54284U_201201_044215/154993215/ccs	chr1	-	183	1	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGCGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	36030585	36030402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_36030400_36030600
m54284U_201201_044215/155059280/ccs	chr16	+	3254	20	NIC	ENSMUSG00000005899.15	novel	4623	20	NA	NA	0	154	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	83.0439592563786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGGCTGAATCTTTA	NA	False	NA	6	True	AATAAA	-19	NA	17437223	17461365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_17437299_17438575_17438627_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
m54284U_201201_044215/155059739/ccs	chr13	-	2119	16	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_15	1954.69318535899	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549180
m54284U_201201_044215/155124353/ccs	chr4	+	2651	7	NIC	ENSMUSG00000059810.19	novel	496	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	17.9071680247511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGTGTATTCCTGGT	NA	False	NA	1	True	AATAAA	-21	NA	62581858	62621255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_62582030_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
m54284U_201201_044215/155125785/ccs	chr6	+	3150	17	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_16	37.5349836818934	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATTGTATGATTTA	35	False	NA	NA	False	AATAAA	-17	NA	11907807	12008012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12007703
m54284U_201201_044215/155126552/ccs	chr3	-	202	1	Intergenic	novelGene_1613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCACAATCAGTAAAGCAT	NA	False	NA	NA	False	NA	NA	NA	104035141	104034939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_104034900_104035100
m54284U_201201_044215/155191442/ccs	chr18	+	4246	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_11	65.9298343358722	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATAAAGGTAGTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	53995193	54088620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
m54284U_201201_044215/155192043/ccs	chrX	-	4233	27	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-126	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_18	111.145760951621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224575	59101315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59174656_59174772_59175403_59175538_59178967_59179118_59180738_59180856_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
m54284U_201201_044215/155257192/ccs	chr8	-	3375	26	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_15	37.603489199807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178348	72161296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_72161476_72161569_72162030_72162218_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
m54284U_201201_044215/15532259/ccs	chrX	-	3138	7	NNC	ENSMUSG00000044148.7	novel	2699	7	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	81.2617512869506	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTACAGTTTTTAATTTC	NA	False	NA	-3	True	AATAAA	-25	NA	12539797	12521117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_12523275_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
m54284U_201201_044215/155322815/ccs	chr10	+	5198	6	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_1	40.8480109674878	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_12966765_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
m54284U_201201_044215/15532562/ccs	chr16	-	313	2	ISM	ENSMUSG00000097313.3	ENSMUST00000232297.2	699	4	-1	31295	0	5561	5prime_fragment	FALSE	canonical	3	93	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTAATGATAGCGGTGT	NA	False	NA	NA	False	ATTAAA	-40	NA	29765335	29757636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_-_29757886_29765271
m54284U_201201_044215/155385861/ccs	chr16	-	762	5	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_4	2801.0438232916	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84632513	84624758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696_84631872_84632355
m54284U_201201_044215/155453662/ccs	chr7	-	3124	5	NIC	ENSMUSG00000030956.16	novel	5465	5	NA	NA	67	-834	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	27.206387117734	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTGTTTCAACTTTAAT	NA	False	NA	NA	False	AAGAAA	-15	NA	132415548	132315927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132415309
m54284U_201201_044215/155454246/ccs	chr6	-	2092	10	NIC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	237.418524036259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCACAGTTCTTGTTTCT	NA	False	NA	-7	True	AATAAA	-22	NA	95695781	95451122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95695669
m54284U_201201_044215/155516962/ccs	chr12	-	3666	33	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_20	60.7050936778579	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403939	69358341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387831_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
m54284U_201201_044215/155518505/ccs	chr7	+	185	1	Intergenic	novelGene_4143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGATAGTAGACCTCTTTA	NA	False	NA	NA	False	NA	NA	NA	138401575	138401760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_138401600_138401800
m54284U_201201_044215/155650241/ccs	chr1	+	4480	7	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	-149	-460	intron_retention	FALSE	canonical	3	110	junction_1	35.8685873091701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATTCCAGTTGTTT	NA	False	NA	22	True	AATAAA	-22	NA	190660869	190678699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190675085_190675973_190676138_190677136
m54284U_201201_044215/155713902/ccs	chr6	-	183	1	Intergenic	novelGene_3301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCATTGAGATGTATA	NA	False	NA	NA	False	NA	NA	NA	66045287	66045104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_66045100_66045300
m54284U_201201_044215/155779778/ccs	chr8	+	2081	8	ISM	ENSMUSG00000031799.11	ENSMUST00000123177.3	1803	9	4726	-372	-329	0	3prime_fragment	FALSE	canonical	0	0	junction_1	264.24702419501	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72888743	72906984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_72888894_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
m54284U_201201_044215/155780185/ccs	chr15	+	6033	23	NIC	ENSMUSG00000022272.18	novel	1030	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	400	junction_1	95.5578769711826	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	-10	True	NA	16	True	AATAAA	-17	NA	25774072	25813759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_25774395_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
m54284U_201201_044215/155844724/ccs	chr7	-	679	7	ISM	ENSMUSG00000064179.14	ENSMUST00000166161.8	750	12	4310	-92	-120	0	3prime_fragment	TRUE	canonical	3	24	junction_6	12.1849178176228	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCTTCAGGGTTGTT	9765	False	NA	-11	True	AATAAA	-19	NA	4513057	4507661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950
m54284U_201201_044215/155847055/ccs	chr9	+	1902	15	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	88.7409667722494	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGCTCTGGCTGTATA	NA	False	NA	13	True	AATAAA	-14	NA	107828165	107848724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107828372_107833063_107833122_107833592_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
m54284U_201201_044215/155911087/ccs	chr12	-	180	1	Intergenic	novelGene_6673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAATTTAAATT	NA	False	NA	NA	False	NA	NA	NA	66842442	66842262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_66842300_66842400
m54284U_201201_044215/15597973/ccs	chr13	+	3746	20	NIC	ENSMUSG00000021413.10	novel	2572	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_15	60.6976065918861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCGTCTACTGGCATTTTC	NA	False	NA	14	True	AATAAA	-19	NA	35059486	35090047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375_35085657_35085980_35086115_35086612_35086659_35087169_35087257_35088026_35088073_35089865
m54284U_201201_044215/15599677/ccs	chr5	+	2275	6	ISM	ENSMUSG00000004455.17	ENSMUST00000197730.2	923	7	-315	-173	0	0	intron_retention	FALSE	canonical	3	39	junction_3	1111.91988920066	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296340	122313332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_122296679_122306237_122306370_122306981_122307213_122310794_122311019_122311208_122311344_122312117
m54284U_201201_044215/15600466/ccs	chr7	+	2710	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	43.556203428936	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGGACTTTCAAGGT	NA	False	NA	53	True	AATAAA	-24	NA	67925742	68012835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_67925790_67950580_67950712_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
m54284U_201201_044215/156041251/ccs	chr13	+	2893	9	NIC	ENSMUSG00000021431.16	novel	6689	8	NA	NA	0	79	intron_retention	FALSE	canonical	1	67	junction_6	66.5450974903486	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACACTACACACTTAGA	NA	False	NA	15	True	AATAAA	-23	NA	38388926	38411035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38398580_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
m54284U_201201_044215/156108384/ccs	chr12	+	1401	10	NNC	ENSMUSG00000060121.16	novel	1946	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	37	junction_1	268.457781125662	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATACAGATGAAATGGC	NA	False	NA	NA	False	AATAAA	-27	NA	59060239	59075185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_59060345_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
m54284U_201201_044215/156108482/ccs	chr16	+	191	1	Intergenic	novelGene_8095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCACTAGAGAGATGGTC	NA	False	NA	NA	False	NA	NA	NA	16924490	16924681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_16924500_16924700
m54284U_201201_044215/156109212/ccs	chr12	+	2430	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	41.916157811926	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725282	111761331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760082_111760134_111760770
m54284U_201201_044215/156173194/ccs	chr4	+	1876	13	NNC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	5488.47514494387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321699	150333330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_150321798_150322144_150322291_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
m54284U_201201_044215/156174665/ccs	chr7	+	2202	11	NIC	ENSMUSG00000030584.15	novel	1574	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	20.5338744517444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCATCTCTAACCTC	5831	False	NA	10	True	ATTAAA	-26	NA	29007442	29017013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_29007524_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
m54284U_201201_044215/156238441/ccs	chr13	-	4543	33	NNC	ENSMUSG00000021311.10	novel	8294	33	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	34.206119244223	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTGAATACAAGGAGAA	5877	False	NA	46	True	ATTAAA	-15	NA	12273065	12201423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_12201978_12202926_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214022_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12240347_12240528_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649_12268865_12272747
m54284U_201201_044215/156239458/ccs	chrX	-	2202	9	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	498	junction_5	41.9545885452354	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	False	NA	-12	True	AATAAA	-17	NA	72502650	72480920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
m54284U_201201_044215/156303581/ccs	chr17	+	3646	19	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	278	junction_2	379.993165143211	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190710	36203562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
m54284U_201201_044215/156303916/ccs	chr8	-	3796	17	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	416	junction_12	64.3418604020742	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73229005	73214332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
m54284U_201201_044215/156304788/ccs	chr12	-	220	1	Intergenic	novelGene_6836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTGCTTTGATTTCT	NA	False	NA	NA	False	GATAAA	-11	NA	94063227	94063007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_94063000_94063200
m54284U_201201_044215/156305308/ccs	chr14	+	3265	6	NIC	ENSMUSG00000022175.10	novel	4228	7	NA	NA	0	537	intron_retention	FALSE	canonical	3	169	junction_1	22.7543402453246	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGGTAAATCAGCTGT	NA	False	NA	4	True	AATAAA	-17	NA	54701593	54707737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706623_54706721
m54284U_201201_044215/156306061/ccs	chr1	+	2739	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	118.037632359605	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201201_044215/156368997/ccs	chr7	+	2637	9	NIC	ENSMUSG00000011658.17	novel	1698	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	96	junction_1	8.1700673191841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGGGCTCTTTGCTGTCG	NA	False	NA	26	True	AATAAA	-37	NA	44545516	44550048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
m54284U_201201_044215/156500793/ccs	chr16	+	2870	18	NNC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	60.1647104833328	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTAGAGTTTAAGT	NA	False	NA	10	True	AATAAA	-18	NA	87251914	87280405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268720_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
m54284U_201201_044215/156501895/ccs	chr2	-	1143	6	ISM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	19213	287	-12975	-287	3prime_fragment	FALSE	canonical	3	46	junction_5	14.8404851672713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGCTTCCAAATCGGGC	NA	False	NA	-31	True	AATAAA	-22	NA	167063311	167045113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128
m54284U_201201_044215/156566662/ccs	chr1	+	5362	29	NNC	ENSMUSG00000026319.14	novel	4328	29	NA	NA	0	-68	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	26.82273631965	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCTGTGTATTTTGT	NA	False	NA	15	True	AATAAA	-15	NA	105591607	105682843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658934_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
m54284U_201201_044215/156568093/ccs	chrX	+	4617	6	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	771	junction_4	36.1917117583571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6206	False	NA	15	True	AATAAA	-16	NA	73348861	73355468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73354141_73354243
m54284U_201201_044215/156631771/ccs	chr5	+	4051	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	0	0	intron_retention	TRUE	canonical	3	20	junction_1	251.968692940655	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4968	False	NA	19	True	AATAAA	-30	NA	105848731	105963076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_105848952_105852690_105852890_105880095_105880241_105959589
m54284U_201201_044215/15663179/ccs	chr1	-	4591	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_8	72.0864912603063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52272391	52224438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52243504_52243676_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
m54284U_201201_044215/156632469/ccs	chr2	-	2878	12	NIC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	539	junction_7	55.8576999582698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101393	25089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100550_25100720_25100885_25101113
m54284U_201201_044215/156632641/ccs	chr19	+	2361	4	NIC	ENSMUSG00000024896.10	novel	2613	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	133.16405921519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTGCACTCATTGAAAT	NA	False	NA	23	True	AATAAA	-30	NA	32463322	32492764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_32463960_32468737_32468936_32475783_32475918_32491372
m54284U_201201_044215/15663340/ccs	chr12	+	4339	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	158.146798805095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3986	False	NA	13	True	AATAAA	-13	NA	83679030	83729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_83679192_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
m54284U_201201_044215/15664299/ccs	chr10	-	2448	14	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	191.95456809625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	NA	False	NA	-5	True	AATAAA	-19	NA	116417405	116321069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
m54284U_201201_044215/15664729/ccs	chr8	+	2868	9	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	424.114076635049	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980658	70987978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70981917_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
m54284U_201201_044215/156762872/ccs	chr1	+	895	10	NIC	ENSMUSG00000053332.14	novel	502	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_6	967.274955483792	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201201_044215/156764554/ccs	chr14	+	157	1	Intergenic	novelGene_7469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATACATTTAAA	4104	False	NA	NA	False	NA	NA	NA	55772935	55773092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_55772900_55773100
m54284U_201201_044215/156827733/ccs	chr7	+	1374	7	NNC	ENSMUSG00000070837.7	novel	1320	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	170.358119527332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_6998834_6999212_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
m54284U_201201_044215/156827735/ccs	chr10	+	3226	19	ISM	ENSMUSG00000069601.15	ENSMUST00000181974.8	3751	20	-135	8838	0	0	5prime_fragment	FALSE	canonical	3	64	junction_16	12.9177120246047	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATGCAGATGTATATA	NA	False	NA	15	True	AATAAA	-20	NA	69761648	69851635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397
m54284U_201201_044215/156829181/ccs	chr10	+	4130	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_11	47.2269932230381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGCTGTTTGTTTCACTG	NA	False	NA	20	True	TATAAA	-36	NA	127216530	127335252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298074_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
m54284U_201201_044215/156829241/ccs	chr9	+	3470	14	NIC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	0	-184	intron_retention	FALSE	canonical	3	496	junction_12	52.987438502472	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	29	False	NA	14	True	ATTAAA	-20	NA	50768278	50792547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
m54284U_201201_044215/156830143/ccs	chr16	-	3148	17	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_13	54.6468420290688	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540772	17469084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
m54284U_201201_044215/156830153/ccs	chr2	+	2101	14	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	158.919241892815	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
m54284U_201201_044215/156959154/ccs	chr9	+	3873	18	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	-101	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_7	65.9314417960129	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATCTGTAGCATTTCTG	9	True	NA	20	True	TATAAA	-21	NA	3404087	3479135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430413_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
m54284U_201201_044215/156960714/ccs	chr13	-	5736	22	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	0	-196	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	65.4114485114944	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881416	46833576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837535_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
m54284U_201201_044215/156960903/ccs	chr4	-	860	1	Intergenic	novelGene_2288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGCCACTTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	139047354	139046494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_139046500_139047400
m54284U_201201_044215/157025033/ccs	chr2	-	3410	8	NIC	ENSMUSG00000026737.13	novel	3477	10	NA	NA	-119	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	32.7008706118891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCTTCTCTGTGCTGG	NA	False	NA	0	True	AATAAA	-21	NA	19003056	18847065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18893862_18894016_18911039_18911137_18912865_18912964_19002662
m54284U_201201_044215/157026202/ccs	chr2	+	192	1	Intergenic	novelGene_1163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTTCAGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	155511159	155511351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155511200_155511400
m54284U_201201_044215/157091345/ccs	chr6	+	2467	19	NNC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_17	82.4314342834376	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	1976	False	NA	13	True	AATAAA	-14	NA	113214811	113258157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254755_113254907_113257563
m54284U_201201_044215/157091907/ccs	chr1	-	177	1	Intergenic	novelGene_541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATGTATAATATTA	NA	False	NA	NA	False	NA	NA	NA	185115566	185115389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_185115400_185115600
m54284U_201201_044215/157155996/ccs	chr2	+	2821	18	NNC	ENSMUSG00000027469.17	novel	3483	18	NA	NA	0	-624	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	195.159929093745	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2725	False	NA	29	True	AATAAA	-28	NA	152689914	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
m54284U_201201_044215/157156342/ccs	chr16	-	182	1	Intergenic	novelGene_8224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATAAAATCT	NA	False	NA	NA	False	NA	NA	NA	32967970	32967788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32967800_32968000
m54284U_201201_044215/157222001/ccs	chr10	-	3866	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-176	0	intron_retention	FALSE	canonical	3	139	junction_20	277.67891817209	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTTTTCCGGAGTTAT	NA	False	NA	NA	False	AATAAA	-21	NA	121462413	121425523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451053_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
m54284U_201201_044215/157287047/ccs	chr2	+	4931	19	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_1	53.2354715589029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201201_044215/157289217/ccs	chr4	-	5438	18	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_15	300.677366778302	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201201_044215/157289247/ccs	chr17	-	3227	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	26.7776025812618	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181445	22145940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22173035_22181236
m54284U_201201_044215/15729255/ccs	chr4	-	1768	4	NIC	ENSMUSG00000029030.15	novel	1724	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	329.056226198502	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTCCTTTTTGAA	NA	False	NA	-3	True	AGTAAA	-16	NA	154245123	154241941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_154243023_154243725_154243880_154244497_154244719_154244811
m54284U_201201_044215/15730124/ccs	chr16	-	181	1	Intergenic	novelGene_8225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTAGTATTACTGTTAAA	NA	False	NA	NA	False	NA	NA	NA	33190725	33190544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_33190500_33190700
m54284U_201201_044215/15730249/ccs	chr13	-	3451	19	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	34.6410161513775	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	-2	True	AATAAA	-22	NA	77283584	77191206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
m54284U_201201_044215/15730870/ccs	chr17	+	358	4	NNC	ENSMUSG00000098090.9	novel	799	3	NA	NA	0	19018	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_3	26.8493740874697	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057539	95101578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_95057661_95063861_95063952_95092912_95092936_95101454
m54284U_201201_044215/1573498/ccs	chr4	-	3620	10	NNC	ENSMUSG00000035495.16	novel	3726	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	52.704627669473	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGTGGGAAGAGTGCTCT	-24	True	NA	-3	True	AATAAA	-25	NA	46138455	46114745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_46117084_46119142_46119282_46119840_46119914_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
m54284U_201201_044215/157353037/ccs	chr6	+	196	1	Intergenic	novelGene_3381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTATGTTTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	88134181	88134377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_88134200_88134400
m54284U_201201_044215/157354719/ccs	chr11	+	2894	8	NIC	ENSMUSG00000020712.12	novel	3059	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2.1189138534559	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATGAGTTTCTTTTCC	7191	False	NA	NA	False	AATAAA	-11	NA	106167497	106178959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_106167620_106172728_106172805_106173612_106173880_106174868_106175190_106175381_106175661_106176197_106176468_106177201_106177445_106177643
m54284U_201201_044215/157418445/ccs	chr7	-	3430	6	NIC	ENSMUSG00000063047.10	novel	3940	6	NA	NA	0	-498	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	18.9166593245213	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTCTCATCTTGCTAGT	NA	False	NA	NA	False	AATACA	-16	NA	27678572	27661283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
m54284U_201201_044215/157418502/ccs	chr11	-	173	1	Intergenic	novelGene_6197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAACAA	9395	False	NA	NA	False	NA	NA	NA	88854432	88854259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88854300_88854400
m54284U_201201_044215/157418992/ccs	chr7	+	1283	12	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	0	-412	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_4	1395.61737871402	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039383	137069911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060571_137060623_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
m54284U_201201_044215/1574711/ccs	chr7	-	3957	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	4823	junction_9	490.228811372812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201201_044215/157484458/ccs	chr16	+	2853	1	NIC	ENSMUSG00000022849.6	novel	1703	8	NA	NA	0	-33202	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAAGGCTGTGTGTGTGT	5404	False	NA	NA	False	NA	NA	NA	35590744	35593597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_35590700_35593600
m54284U_201201_044215/157485041/ccs	chr3	+	1748	1	Intergenic	novelGene_1423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAGGAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	65550777	65552525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_65550800_65552500
m54284U_201201_044215/157485231/ccs	chr2	-	4915	1	Genic_Genomic	ENSMUSG00000073236.5	novel	NA	NA	NA	NA	-333	-335	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATACTTGCTAAAA	8679	False	NA	NA	False	NA	NA	NA	153188326	153183411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_153183400_153188300
m54284U_201201_044215/157551455/ccs	chr7	+	2724	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	51.6048565978997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGGACTTTCAAGGT	NA	False	NA	53	True	AATAAA	-24	NA	67925742	68012835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
m54284U_201201_044215/157811140/ccs	chr7	-	2119	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1613	junction_2	102.834278763887	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	False	NA	-1	True	NA	NA	NA	139696328	139685622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139692460_139692848_139693047_139696219
m54284U_201201_044215/157811393/ccs	chr17	-	3021	8	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	397	1844	multi-exon	FALSE	canonical	3	31	junction_1	79.8442361151782	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37299540	37278242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr17_-_37279193_37279355_37280210_37280331_37280614_37281212_37281462_37281732_37281891_37298307_37298416_37298546_37298823_37299396
m54284U_201201_044215/157811522/ccs	chr7	-	1651	6	NIC	ENSMUSG00000061479.16	novel	1365	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1453	junction_5	341.86137541407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	False	NA	-8	True	ATTAAA	-26	NA	26895578	26886431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_26886790_26888290_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
m54284U_201201_044215/157812693/ccs	chr2	-	2405	8	NIC	ENSMUSG00000027387.12	novel	1624	9	NA	NA	54	0	intron_retention	FALSE	canonical	3	222	junction_7	21.296737318382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTTTCATACTTGATT	NA	False	NA	1	True	AATAAA	-22	NA	128785943	128768187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_128768732_128770806_128770849_128771766_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
m54284U_201201_044215/157878376/ccs	chr4	+	1716	8	NIC	ENSMUSG00000028792.15	novel	749	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	920.647265653411	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTGTGGAGTTTTTT	2998	False	NA	29	True	AATAAA	-19	NA	128887145	128905322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_128887230_128892926_128893053_128895288_128895353_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
m54284U_201201_044215/157942774/ccs	chr17	+	179	1	Intergenic	novelGene_8477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATATATATAATTTATT	NA	False	NA	NA	False	NA	NA	NA	29230439	29230618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29230400_29230600
m54284U_201201_044215/157944016/ccs	chr4	-	185	1	Intergenic	novelGene_2436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGTCACAAGCTGCTATC	NA	False	NA	NA	False	NA	NA	NA	155905807	155905622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155905600_155905800
m54284U_201201_044215/157944240/ccs	chr7	+	4377	24	NIC	ENSMUSG00000039990.17	novel	4380	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	46.475556109529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGGTAGTTCCCACTT	NA	False	NA	6	True	AATAAA	-19	NA	133239421	133273908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273097
m54284U_201201_044215/15796600/ccs	chr2	-	1982	4	NIC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	423.359841689733	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185952	152179341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_152180608_152181634_152181928_152184956_152185204_152185776
m54284U_201201_044215/158008265/ccs	chr8	+	7232	41	NIC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	36.5949450061071	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725357	71813357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801546_71801578_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
m54284U_201201_044215/158075463/ccs	chr10	-	1338	14	NNC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-191	96	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_13	80.9962377678394	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTTCTTGCTTTGTATT	NA	False	NA	-1	True	AAAAAG	-22	NA	128012539	127969096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218_128012306_128012518
m54284U_201201_044215/158141030/ccs	chr1	-	365	1	Intergenic	novelGene_339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAATAAATAAATCTTT	2670	False	NA	NA	False	NA	NA	NA	135281410	135281045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_135281000_135281400
m54284U_201201_044215/158204457/ccs	chr2	+	1312	10	NIC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	0	-112	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	693.586349845034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCACCGCCCACTGCT	5118	False	NA	12	True	AATAAA	-13	NA	71219603	71271854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71269039_71269157_71271511
m54284U_201201_044215/158335345/ccs	chr19	-	2762	19	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_12	8.62740394124629	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	3957040	3946049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
m54284U_201201_044215/158335586/ccs	chr2	-	191	1	Intergenic	novelGene_727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTGGCCCACCCTTCTCC	NA	False	NA	NA	False	NA	NA	NA	32757229	32757038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32757000_32757200
m54284U_201201_044215/158337325/ccs	chr12	+	3366	6	NIC	ENSMUSG00000021271.6	novel	3723	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	19.8232187093822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTTTCTTGATGTGT	NA	False	NA	13	True	AGTAAA	-16	NA	110816712	110836430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_110816998_110821433_110822307_110830397_110830491_110831289_110831440_110833141_110833260_110834583
m54284U_201201_044215/158401772/ccs	chr6	-	4306	27	NIC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_26	34.3139007835345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	143045867	142956653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045823
m54284U_201201_044215/158402434/ccs	chr9	-	195	1	Intergenic	novelGene_5139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTTGAGATCCACTGCC	NA	False	NA	NA	False	NA	NA	NA	118197284	118197089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_118197100_118197300
m54284U_201201_044215/158466098/ccs	chr4	-	2343	6	NNC	ENSMUSG00000014592.22	novel	2178	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	485.492492217954	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGTGGGCCACTAGTGT	NA	False	NA	NA	False	NA	NA	NA	151946203	151864909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_151866589_151874741_151875011_151876875_151876960_151914874_151914994_151920270_151920341_151946081
m54284U_201201_044215/158467552/ccs	chr7	+	2516	9	NIC	ENSMUSG00000058454.16	novel	2752	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	171.596137412822	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_143384003_143387504_143387674_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
m54284U_201201_044215/158532931/ccs	chr8	+	4399	32	ISM	ENSMUSG00000004565.16	ENSMUST00000004681.14	4438	34	1490	0	0	0	3prime_fragment	FALSE	canonical	1	71	junction_27	50.3064283424121	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566873	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
m54284U_201201_044215/158597878/ccs	chr9	-	2873	3	NIC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1351	junction_2	56.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATATAATGAAAATACAT	NA	False	NA	NA	False	AATAAA	-3	NA	50515112	50507656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_50508551_50510060_50511965_50515037
m54284U_201201_044215/15859794/ccs	chr11	-	2682	6	NIC	ENSMUSG00000042148.9	novel	2915	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	106.914919445323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCGTGTGTCCTGTGT	5007	False	NA	-4	True	AATAAA	-14	NA	63970292	63853452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_63855355_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
m54284U_201201_044215/158598691/ccs	chr11	+	2126	10	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_2	34.5350063944784	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992513	103003026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102992615_102993507_102993972_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
m54284U_201201_044215/158598973/ccs	chr15	-	180	1	Intergenic	novelGene_7803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATAGGTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	78755145	78754965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_78755000_78755100
m54284U_201201_044215/158599359/ccs	chr16	+	2078	6	NIC	ENSMUSG00000022744.13	novel	1540	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	183.063486255452	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGAGATCACAACATG	NA	False	NA	24	True	AATAAA	-31	NA	58548385	58554614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_58548448_58549542_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
m54284U_201201_044215/15860148/ccs	chr8	-	185	1	Intergenic	novelGene_4215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTAAGAGTCTTGATTT	NA	False	NA	NA	False	NA	NA	NA	14929247	14929062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_14929100_14929200
m54284U_201201_044215/15860945/ccs	chr11	+	3125	16	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	970	junction_6	96.750308641483	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
m54284U_201201_044215/15860990/ccs	chr11	-	2357	11	NIC	ENSMUSG00000018669.15	novel	2201	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_7	344.978390627587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807322	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96804207_96804309_96804490_96804623_96806976_96807023_96807209
m54284U_201201_044215/15861547/ccs	chr14	-	3045	9	NNC	ENSMUSG00000022180.8	novel	4084	11	NA	NA	27185	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	6.32331993497087	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGGAGTTAATAATCAT	2347	False	NA	NA	False	AATAAA	-19	NA	54992202	54959665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54973180_54973335_54974996_54975123_54992133
m54284U_201201_044215/158664059/ccs	chr5	-	2456	15	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_14	569.176244179934	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	3121	False	NA	-25	True	AATAAA	-15	NA	138169279	138162861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169071
m54284U_201201_044215/158664327/ccs	chr1	-	3761	8	ISM	ENSMUSG00000026211.19	ENSMUST00000155084.8	4131	12	-720	5803	0	0	5prime_fragment	FALSE	canonical	3	33	junction_3	4.13546137889432	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATGGTAAATAAGTTCA	NA	False	NA	NA	False	AATAAA	-25	NA	75483005	75472980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
m54284U_201201_044215/158729080/ccs	chr8	+	190	1	Intergenic	novelGene_4612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACCTACTTGCAGCCTC	NA	False	NA	NA	False	NA	NA	NA	127538798	127538988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_127538800_127539000
m54284U_201201_044215/158793859/ccs	chr3	-	787	1	NIC	ENSMUSG00000015943.12	novel	729	2	NA	NA	0	63	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCTTATTCCTTGATTTG	NA	False	NA	-7	True	AATAAA	-15	NA	96104902	96104115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_96104100_96104900
m54284U_201201_044215/158793929/ccs	chr15	+	186	1	Intergenic	novelGene_7979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCCACCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	99952426	99952612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99952400_99952600
m54284U_201201_044215/158860321/ccs	chr7	+	4089	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	88.6841012024939	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTCCATTTGGTC	NA	False	NA	21	True	AATAAA	-22	NA	127187938	127202766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190471_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
m54284U_201201_044215/158861745/ccs	chr17	-	3899	6	NIC	ENSMUSG00000024098.7	novel	4086	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	105.899952785636	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGTTTTTTATTAATTT	8783	False	NA	1	True	AATAAA	-19	NA	66258132	66230059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66233154_66233251_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
m54284U_201201_044215/158924853/ccs	chr10	+	176	1	Intergenic	novelGene_5620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAATTTTTTTTAAAAAA	6753	False	NA	NA	False	NA	NA	NA	128050201	128050377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128050200_128050400
m54284U_201201_044215/158925039/ccs	chr2	+	4656	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	0	983	intron_retention	FALSE	canonical	3	2736	junction_8	187.126275695199	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896606	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201201_044215/158926486/ccs	chr2	-	4408	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	171.572408658101	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165726568	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
m54284U_201201_044215/158927123/ccs	chr17	+	178	1	Intergenic	novelGene_8584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAGAAGATAAAACTTAG	NA	False	NA	NA	False	NA	NA	NA	36547858	36548036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_36547900_36548000
m54284U_201201_044215/159123258/ccs	chr4	-	173	1	Intergenic	novelGene_1872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGAGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	55320695	55320522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_55320500_55320700
m54284U_201201_044215/159188776/ccs	chr14	-	2115	7	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	0	793	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	123.583642391162	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216987	31200748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31211125_31211277_31214278_31214414_31215553_31215922_31216858
m54284U_201201_044215/159189053/ccs	chr18	-	3551	4	NIC	ENSMUSG00000051469.15	novel	1513	4	NA	NA	0	1652	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	102.009803450453	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTAGCTTGGAATTGC	NA	False	NA	NA	False	AATAAA	-23	NA	24153377	24145329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_24147743_24150340_24150489_24150724_24151226_24152888
m54284U_201201_044215/159189705/ccs	chr10	+	3459	4	NIC	ENSMUSG00000060733.14	novel	5447	6	NA	NA	0	-1732	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	165.984604373083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2289	False	NA	7	True	AATAAA	-21	NA	71183665	71219983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_71183921_71208537_71208711_71212534_71212617_71217034
m54284U_201201_044215/159189802/ccs	chrX	-	2392	10	NIC	ENSMUSG00000071708.12	novel	3717	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	342	junction_4	49.2072964578563	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGATTAGCAGTGCTTCA	NA	False	NA	-46	True	ATTAAA	-27	NA	156275040	156228691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
m54284U_201201_044215/159189820/ccs	chr11	+	925	4	NNC	ENSMUSG00000017715.12	novel	3113	3	NA	NA	-4257	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_1	147.648983139818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117898911	117914837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_117898955_117905399_117905549_117910432_117910559_117914230
m54284U_201201_044215/15925274/ccs	chr6	-	200	1	Intergenic	novelGene_3126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCAAGGTGTGTTTCCT	8187	False	NA	NA	False	NA	NA	NA	29372331	29372131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_29372100_29372300
m54284U_201201_044215/159253854/ccs	chr13	-	187	1	Intergenic	novelGene_7205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAAGACCCACCACTT	NA	False	NA	NA	False	NA	NA	NA	73939878	73939691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_73939700_73939900
m54284U_201201_044215/159253900/ccs	chr7	+	2719	10	NIC	ENSMUSG00000045795.11	novel	3069	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_2	20.9961783706664	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATTACCTTAAAAATTTT	6958	False	NA	-63	True	AATAAA	-14	NA	81221013	81246225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754_81241851_81243399_81243869_81245634
m54284U_201201_044215/15926572/ccs	chr11	-	5568	35	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	0	0	intron_retention	FALSE	canonical	3	633	junction_3	222.753904349877	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915015	98883768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
m54284U_201201_044215/159318369/ccs	chr13	-	4156	5	ISM	ENSMUSG00000021338.18	ENSMUST00000125420.8	2501	10	0	23449	0	3656	5prime_fragment	FALSE	canonical	3	185	junction_4	9.83298021964857	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCATGTGCTGCGTTGAG	NA	False	NA	NA	False	NA	NA	NA	24464773	24345188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
m54284U_201201_044215/159318700/ccs	chr19	-	177	1	Intergenic	novelGene_9246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTTTTACTTC	NA	False	NA	NA	False	NA	NA	NA	38531565	38531388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_38531400_38531600
m54284U_201201_044215/159319236/ccs	chr7	-	177	1	Intergenic	novelGene_3828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGTAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	44074102	44073925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_44073900_44074100
m54284U_201201_044215/159319973/ccs	chr7	+	1266	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	93.7861397009174	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATGGAGAAA	9880	False	NA	-5	True	NA	NA	NA	49408862	49423723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_49408894_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
m54284U_201201_044215/159320126/ccs	chr7	-	4359	20	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	1234	junction_19	87.7634695804455	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153827	143111442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
m54284U_201201_044215/159320315/ccs	chr2	-	2111	10	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	188.779118430921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174332	152158253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
m54284U_201201_044215/159384155/ccs	chr15	+	183	1	Intergenic	novelGene_7956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAACCAAGCTGAC	NA	False	NA	NA	False	NA	NA	NA	98971731	98971914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98971700_98971900
m54284U_201201_044215/159384166/ccs	chr6	+	3055	3	NNC	ENSMUSG00000052751.17	novel	3057	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	2	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	21	True	AATAAA	-19	NA	48570833	48576016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_48570987_48571795_48571911_48573229
m54284U_201201_044215/159384759/ccs	chr14	-	176	1	Intergenic	novelGene_7409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATGTACATG	NA	False	NA	NA	False	NA	NA	NA	44671716	44671540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_44671500_44671700
m54284U_201201_044215/159385164/ccs	chr5	+	3234	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	92.8146300728261	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7146	False	NA	16	True	AATAAA	-17	NA	31609778	31639098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31609922_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
m54284U_201201_044215/159449262/ccs	chr14	+	3823	18	NIC	ENSMUSG00000021911.17	novel	4413	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	20	junction_2	134.888086381826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCATGCCACTTATATTT	NA	False	NA	15	True	AATAAA	-28	NA	31923905	32019177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_31924143_31930113_31930181_31930648_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
m54284U_201201_044215/159449837/ccs	chr5	-	3451	19	NNC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_18	319.198151430335	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559841	149540309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434_149559697_149559784
m54284U_201201_044215/159450182/ccs	chr7	-	4610	7	NIC	ENSMUSG00000030741.16	novel	3251	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	446	junction_4	26.3923389557568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976622	125969238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125974376_125975845_125975912_125976008
m54284U_201201_044215/159647956/ccs	chr4	-	175	1	Intergenic	novelGene_2293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAAGAAGAAACTGC	NA	False	NA	NA	False	NA	NA	NA	140027712	140027537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_140027500_140027700
m54284U_201201_044215/159711263/ccs	chr6	+	1516	5	NNC	ENSMUSG00000030137.9	novel	2263	5	NA	NA	-8365	-757	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	2.06155281280883	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGCCTCTTTCTTTGTG	NA	False	NA	3	True	AATATA	-14	NA	121179289	121203056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_121179441_121197342_121197566_121198259_121198409_121199692_121200374_121202744
m54284U_201201_044215/159711562/ccs	chr11	-	190	1	Intergenic	novelGene_5653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAAGGCGTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	3431554	3431364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_3431400_3431600
m54284U_201201_044215/159713873/ccs	chr17	-	2572	9	NIC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95057447	95034512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
m54284U_201201_044215/159778748/ccs	chr14	+	195	1	Intergenic	novelGene_7375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTAAGTCTCTCGGGG	NA	False	NA	NA	False	NA	NA	NA	27013211	27013406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_27013200_27013400
m54284U_201201_044215/159778933/ccs	chr2	+	2159	5	NNC	ENSMUSG00000035772.12	novel	2429	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	280.38321989734	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGGTGTCAGACTCTC	NA	False	NA	15	True	NA	NA	NA	28358093	28361177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_28358155_28358254_28358372_28358832_28358963_28359232_28359341_28359434
m54284U_201201_044215/159779630/ccs	chr13	-	1201	8	NNC	ENSMUSG00000021619.7	novel	1583	8	NA	NA	6065	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	7.14856914468389	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGACACATCTTAAAT	4945	False	NA	NA	False	ATTAAA	-37	NA	91366013	91083987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91365852
m54284U_201201_044215/159842730/ccs	chr5	-	2923	23	NIC	ENSMUSG00000029705.18	novel	2831	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	22.7204080541869	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGTCTTTTATTCTGTG	NA	False	NA	-1	True	AATAAA	-18	NA	136596132	136276988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355865_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
m54284U_201201_044215/159844523/ccs	chr2	-	206	1	Intergenic	novelGene_1000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGGGCTGGGGTATCCG	NA	False	NA	NA	False	AAAACA	-6	NA	118959807	118959601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_118959600_118959800
m54284U_201201_044215/15991015/ccs	chr15	-	2349	7	NNC	ENSMUSG00000022299.10	novel	5905	7	NA	NA	0	186	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	36.5467736834138	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTTGCTATAATATCC	NA	False	NA	NA	False	AATAAA	-31	NA	38976111	38958176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_38959499_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
m54284U_201201_044215/15991600/ccs	chr2	-	1812	9	NNC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	431.979961919532	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	-8	True	AATATA	-16	NA	172212455	172198115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205666_172206361_172206417_172208841_172209092_172210905_172210953_172212392
m54284U_201201_044215/15991707/ccs	chr17	+	5192	30	NIC	ENSMUSG00000024169.17	novel	5489	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	15.4415779815037	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTGTACTTCTCTCG	7183	False	NA	23	True	AATAAA	-28	NA	25235364	25318469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25235574_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
m54284U_201201_044215/15993608/ccs	chr6	+	161	1	Intergenic	novelGene_3153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAGAAGAAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	30324458	30324619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_30324500_30324600
m54284U_201201_044215/159974043/ccs	chr2	-	176	1	Intergenic	novelGene_1121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	152117817	152117641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_152117600_152117800
m54284U_201201_044215/159974764/ccs	chr6	-	195	1	Intergenic	novelGene_3355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAAACTGAGGTGAA	915	False	NA	NA	False	NA	NA	NA	85373776	85373581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_85373600_85373800
m54284U_201201_044215/160039206/ccs	chr6	-	2647	12	NNC	ENSMUSG00000030216.13	novel	2739	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	247	junction_11	431.640078103034	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGTGTTTGTGTAATG	2922	False	NA	-1	True	AATAAA	-19	NA	136805141	136790651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805019
m54284U_201201_044215/160039905/ccs	chr17	-	174	1	Intergenic	novelGene_8636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATAATCTTTTTTTAAAA	NA	False	NA	-13	True	NA	NA	NA	48115911	48115737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_48115700_48115900
m54284U_201201_044215/160040842/ccs	chr18	-	4032	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	80.3868481250131	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681766	62637225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
m54284U_201201_044215/160105598/ccs	chr11	-	181	1	Intergenic	novelGene_6136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAGGTGAAGCTTA	1219	False	NA	NA	False	NA	NA	NA	84915135	84914954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_84915000_84915100
m54284U_201201_044215/160106239/ccs	chr11	+	156	1	Intergenic	novelGene_5980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGGAAAAAAAAAGATAAAGA	NA	False	NA	NA	False	NA	NA	NA	72558554	72558710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_72558600_72558700
m54284U_201201_044215/160106454/ccs	chr5	+	3602	27	NIC	ENSMUSG00000029176.14	novel	2758	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	314	junction_6	49.3856937337336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTTCCATCCTTGTG	NA	False	NA	21	True	AATAAA	-21	NA	52991467	53024084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
m54284U_201201_044215/160170260/ccs	chr4	+	185	1	Intergenic	novelGene_2287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAGGTTGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	139020470	139020655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_139020500_139020700
m54284U_201201_044215/160170270/ccs	chr4	+	2381	13	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	47.2622705995197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696417	115736447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731955_115732012_115732577_115732743_115733777_115733822_115735146
m54284U_201201_044215/160171248/ccs	chr2	-	206	1	Intergenic	novelGene_1233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCTCTTCCAGAGGTCC	7929	False	NA	NA	False	NA	NA	NA	165858029	165857823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_165857800_165858000
m54284U_201201_044215/160171536/ccs	chr2	+	2617	17	NIC	ENSMUSG00000039849.7	novel	383	2	NA	NA	0	-3077	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	47.1206894580289	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGAGGGTCTTGGGGC	6644	False	NA	17	True	AATACA	-15	NA	164721971	164733297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_164722019_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
m54284U_201201_044215/160172676/ccs	chr15	-	201	1	Intergenic	novelGene_7847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGGAAATCAGATATAG	NA	False	NA	NA	False	NA	NA	NA	81555076	81554875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81554900_81555100
m54284U_201201_044215/160235681/ccs	chr11	-	194	1	Intergenic	novelGene_6443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAGCCCTGAGAGGTAG	NA	False	NA	NA	False	NA	NA	NA	114690850	114690656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_114690700_114690800
m54284U_201201_044215/160235853/ccs	chr10	-	204	1	Intergenic	novelGene_5416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	441	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGAGGGATCGGGGCTGGC	6698	False	NA	NA	False	TTTAAA	-14	NA	75791883	75791679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75791700_75791900
m54284U_201201_044215/160301979/ccs	chr5	-	1003	7	NIC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	0	67	combination_of_known_junctions	FALSE	canonical	3	80	junction_2	658.000105538661	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTTCAGTGATGCTA	NA	False	NA	-22	True	ATTAAA	-18	NA	30278615	30265994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_30266132_30266965_30267048_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
m54284U_201201_044215/160302990/ccs	chr17	-	204	1	ISM	ENSMUSG00000036858.9	ENSMUST00000041012.9	1283	4	7846	0	7846	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACACAGGCAT	NA	False	NA	NA	False	NA	NA	NA	47066792	47066588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_47066600_47066800
m54284U_201201_044215/160366615/ccs	chr8	-	1392	4	NNC	ENSMUSG00000038508.8	novel	1380	3	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	120.610484158256	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCGTCTCAGTGACCTTG	480	False	NA	-6	True	AATAAA	-18	NA	71085280	71082042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_71082825_71083982_71084242_71084799_71085030_71085159
m54284U_201201_044215/160367129/ccs	chr15	-	857	5	NNC	ENSMUSG00000116295.2	novel	655	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	335.890607192282	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGATCATACCATAGC	NA	False	NA	-10	True	AATAAA	-17	NA	97065125	97058813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_97059277_97059835_97059964_97063982_97064057_97064383_97064508_97065057
m54284U_201201_044215/160432321/ccs	chr12	+	3937	15	NIC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	-646	combination_of_known_junctions	FALSE	canonical	3	216	junction_10	79.3247008394315	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGCCCCCTGGGTCAG	8457	False	NA	12	True	AATAAA	-12	NA	73954776	73993658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
m54284U_201201_044215/160497960/ccs	chrX	+	3504	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	0	-449	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_25	756.04464841701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAAGTATGTCTA	NA	False	NA	72	True	AATAAA	-41	NA	20524659	20548969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548453_20548616
m54284U_201201_044215/160498193/ccs	chr11	-	200	1	Intergenic	novelGene_6222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTCTGGCTTTGCTTA	8336	False	NA	NA	False	NA	NA	NA	95001973	95001773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95001800_95002000
m54284U_201201_044215/160498343/ccs	chr15	-	184	1	Intergenic	novelGene_7656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTTTCTGATAGGA	NA	False	NA	-8	True	NA	NA	NA	25305760	25305576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_25305600_25305800
m54284U_201201_044215/160565370/ccs	chr4	+	2134	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_3	350.79659348403	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650936	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134651079_134651185_134651794_134652603_134653462_134654045_134654130_134654241
m54284U_201201_044215/160565596/ccs	chr1	+	3891	22	NIC	ENSMUSG00000026288.15	novel	3942	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_19	112.00904968298	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9370	False	NA	19	True	AATAAA	-20	NA	87603960	87648229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642998_87643036_87645411_87646007_87647042
m54284U_201201_044215/16057710/ccs	chr2	-	4818	11	NNC	ENSMUSG00000063972.14	novel	5941	11	NA	NA	-125	-1303	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	22.851914580621	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGCAAGCGCACT	NA	False	NA	NA	False	TTTAAA	-30	NA	38816412	38614688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38762606_38762652_38775207_38775250_38816129
m54284U_201201_044215/160630286/ccs	chr4	+	3020	17	NIC	ENSMUSG00000041143.17	novel	3318	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	17.3561048337465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTCTTCTTTTCACCT	NA	False	NA	28	True	AATAAA	-19	NA	138700219	138786482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_138700301_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
m54284U_201201_044215/160630355/ccs	chr9	+	184	1	Intergenic	novelGene_4656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCACCCCACACCCAG	NA	False	NA	24	True	NA	NA	NA	21071064	21071248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_21071100_21071200
m54284U_201201_044215/160630586/ccs	chr3	+	1166	11	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	233.890765102002	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281986	145309868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_145282115_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
m54284U_201201_044215/160630756/ccs	chr8	-	167	1	Intergenic	novelGene_4606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGGAGGTGTGAAGTT	NA	False	NA	-1	True	NA	NA	NA	126452850	126452683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_126452700_126452800
m54284U_201201_044215/160694593/ccs	chr1	-	178	1	Intergenic	novelGene_480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	171300701	171300523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_171300500_171300700
m54284U_201201_044215/160695111/ccs	chr14	-	2740	14	NNC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	69.6901001518264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70864494	70841109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_70842295_70842407_70842489_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852788_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
m54284U_201201_044215/160695601/ccs	chr2	+	2942	22	NIC	ENSMUSG00000027303.19	novel	5325	21	NA	NA	0	-309	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	66.9042704608285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCCAGATTGTTCCTTG	NA	False	NA	28	True	AATGAA	-17	NA	130292197	130395634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130292479_130345393_130345473_130345913_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
m54284U_201201_044215/160696111/ccs	chr10	+	945	7	NIC	ENSMUSG00000025351.15	novel	1063	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	3700	junction_1	246.151996854699	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATGGTCTCAGTTTATC	577	False	NA	35	True	ATTAAA	-27	NA	128745790	128748691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747933_128748029_128748171_128748306_128748391_128748543
m54284U_201201_044215/160761370/ccs	chr18	-	4349	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	130	junction_12	289.236874817602	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982031	60946826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
m54284U_201201_044215/160762430/ccs	chr10	+	184	1	Intergenic	novelGene_5504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGTAAAAGAAAA	221	False	NA	NA	False	NA	NA	NA	93596202	93596386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_93596200_93596400
m54284U_201201_044215/160825518/ccs	chr17	+	3939	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	276	junction_13	131.268238351857	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201201_044215/160826467/ccs	chr9	+	4207	7	NNC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_4	230.587956223987	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198865	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59218572_59220520_59221035_59221135_59222016
m54284U_201201_044215/160828005/ccs	chr6	-	3639	1	Intergenic	novelGene_3236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGTTCCTAAAAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	40350638	40346999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_40347000_40350600
m54284U_201201_044215/160892473/ccs	chr2	+	3201	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	24	junction_11	116.355113324229	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210902	144249596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542_144248632_144249231
m54284U_201201_044215/160892507/ccs	chr17	+	3535	12	NIC	ENSMUSG00000042203.9	novel	3651	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	38.1705611111127	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTTTGGTTTCCTGGTG	NA	False	NA	14	True	AATAAA	-20	NA	29768764	29825872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29768969_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
m54284U_201201_044215/160956593/ccs	chr3	-	2436	7	NNC	ENSMUSG00000040151.10	novel	6177	7	NA	NA	0	-3744	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.4831926716371	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTATTCTGGTATTTCT	NA	False	NA	-14	True	AGTAAA	-15	NA	144275942	144139210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_144140479_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
m54284U_201201_044215/160957024/ccs	chr10	-	3651	24	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_11	80.1914297567216	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	False	NA	1	True	AATAAA	-35	NA	62628065	62580240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
m54284U_201201_044215/160957266/ccs	chr5	-	2284	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	468	intron_retention	FALSE	canonical	3	1613	junction_6	125.038167012623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527112	117517213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
m54284U_201201_044215/160957500/ccs	chr8	-	2177	4	NIC	ENSMUSG00000040459.12	novel	3197	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_2	425.067837723188	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5255	False	NA	-11	True	AATAAA	-35	NA	8740521	8716575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_8717417_8731383_8731949_8733747_8733974_8739976
m54284U_201201_044215/160958472/ccs	chr9	+	4656	17	NIC	ENSMUSG00000032479.16	novel	5573	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	87.976204169082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760867	109912241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910908
m54284U_201201_044215/161022481/ccs	chr6	-	3478	9	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	3170.31271131098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8913	False	NA	-21	True	AATAAA	-12	NA	122719481	122704784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122716791_122716953_122717346_122717440_122719334
m54284U_201201_044215/161022818/ccs	chr13	-	5591	27	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_26	20.4582125694906	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTATCCACATTATT	NA	False	NA	-8	True	AATAAA	-17	NA	59970961	59919693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
m54284U_201201_044215/161024172/ccs	chr12	-	179	1	Intergenic	novelGene_6761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTATAGCCATGTCCTC	NA	False	NA	NA	False	NA	NA	NA	80679648	80679469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80679500_80679600
m54284U_201201_044215/161089354/ccs	chr13	-	4175	15	NIC	ENSMUSG00000021156.18	novel	4117	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	43.1802108869896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTCTTGTCAGTAAGCTG	NA	False	NA	-1	True	AATAAA	-19	NA	9815243	9734871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
m54284U_201201_044215/161155380/ccs	chr9	+	3135	9	NIC	ENSMUSG00000039285.13	novel	3396	8	NA	NA	0	-250	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	60.328139164075	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTGTCCTTGCCTATG	9643	False	NA	NA	False	ATTAAA	-34	NA	117869624	117892657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117888687_117888735_117890781
m54284U_201201_044215/161155457/ccs	chr3	-	3867	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	-245	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	266.318341808583	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3507	False	NA	-4	True	AATATA	-14	NA	89959822	89907844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/161155723/ccs	chr10	-	4535	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	98.8862467480608	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380279_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
m54284U_201201_044215/161155879/ccs	chr5	+	4228	18	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	715.692009109445	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228708_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/16123824/ccs	chr5	-	4290	32	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_23	92.9314137344788	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	621	False	NA	-3	True	AATAAA	-31	NA	134343614	134266687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
m54284U_201201_044215/161285755/ccs	chr10	-	2858	17	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_15	145.637593339598	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417405	116321070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116373125_116373184_116384937_116385081_116417357
m54284U_201201_044215/161285973/ccs	chr6	+	4926	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	88.6097504218497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891355	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891462_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
m54284U_201201_044215/161286625/ccs	chr8	+	2121	1	Intergenic	novelGene_4185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTCTAAAAAAAAAAAAAAAA	5619	False	NA	NA	False	AATAAA	-11	NA	3317489	3319610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_3317500_3319600
m54284U_201201_044215/161349809/ccs	chr5	-	987	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	0	419	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	560.802195110554	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047607	25008245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047539
m54284U_201201_044215/161350700/ccs	chr3	-	205	1	Intergenic	novelGene_1634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGAGATTCCCTGAAC	6724	False	NA	NA	False	NA	NA	NA	108697773	108697568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108697600_108697800
m54284U_201201_044215/161351792/ccs	chr7	-	3835	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	232.057278658767	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9414	False	NA	0	True	NA	NA	NA	126102609	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201201_044215/161415498/ccs	chr7	-	3371	11	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_1	265.936383370159	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	-5	True	ATTAAA	-24	NA	37718991	37659416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_37661029_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
m54284U_201201_044215/161416110/ccs	chr2	+	174	1	Intergenic	novelGene_1225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165642410	165642584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_165642400_165642600
m54284U_201201_044215/161482463/ccs	chr2	-	3505	3	NNC	ENSMUSG00000048486.7	novel	3967	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	26.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCCGGAGTTTGCTGTGT	NA	False	NA	-8	True	ATTAAA	-25	NA	163314549	163308298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_163310338_163310799_163312039_163314322
m54284U_201201_044215/161482993/ccs	chr1	-	1733	3	NIC	ENSMUSG00000038633.6	novel	2048	3	NA	NA	0	-196	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCTTAGTGGAATTTC	NA	False	NA	-9	True	NA	NA	NA	182109789	182103532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_182104459_182106540_182107284_182109725
m54284U_201201_044215/161483137/ccs	chr12	-	3653	20	NIC	ENSMUSG00000015143.16	novel	3734	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	66.6380640396115	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTACTTTGCTTGTTCCTT	NA	False	NA	-5	True	ATTAAA	-16	NA	80307145	80214320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_80215255_80215631_80215791_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
m54284U_201201_044215/161483153/ccs	chrX	-	2140	8	NIC	ENSMUSG00000031371.15	novel	1380	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_5	199.394696263364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTTGCCTTCGGACTACT	NA	False	NA	-12	True	AATAAA	-17	NA	72502650	72480920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72481172_72489415_72489531_72490533_72491663_72491797_72491957_72492416_72492509_72498472_72498541_72501579_72501696_72502440
m54284U_201201_044215/161547466/ccs	chr2	-	6491	17	NNC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_16	50.1067610208443	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	7599	False	NA	-1	True	AATAAA	-17	NA	131987028	131894415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131973462_131973590_131986931
m54284U_201201_044215/161612163/ccs	chr18	-	4216	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_8	75.834346259214	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCCAGAGCATTTC	NA	False	NA	-48	True	AATAAA	-16	NA	62681766	62637225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
m54284U_201201_044215/161678552/ccs	chr6	+	2646	5	NNC	ENSMUSG00000052763.8	novel	2801	5	NA	NA	152	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	63.3141966702571	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACAGGGTGTTTTCTG	NA	False	NA	24	True	AATAAA	-31	NA	47897561	47909573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907647
m54284U_201201_044215/161679681/ccs	chr7	-	2033	3	NIC	ENSMUSG00000049600.9	novel	2171	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	55	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATTTTAGGATTCCAA	NA	False	NA	-45	True	NA	NA	NA	12743749	12739637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_12740308_12740950_12742257_12743692
m54284U_201201_044215/161743161/ccs	chr8	+	1167	4	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	-93	283	multi-exon	FALSE	canonical	3	112	junction_3	226.010324247957	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCATGTGGGCATTCAAA	NA	False	NA	NA	False	AATAAA	-7	NA	20697891	20727549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717493_20727081
m54284U_201201_044215/161744688/ccs	chr9	+	2548	14	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	271	junction_2	36.9687217865663	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGCTCTGGCTGTATA	NA	False	NA	13	True	AATAAA	-14	NA	107828165	107848724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
m54284U_201201_044215/161745532/ccs	chr14	-	1517	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	1169	-111	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_8	1027.11737857705	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63745036	63729906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63744906
m54284U_201201_044215/161808395/ccs	chr6	+	4309	6	NNC	ENSMUSG00000043131.15	novel	4412	6	NA	NA	0	-79	intron_retention	FALSE	canonical	3	32	junction_1	112.474708268126	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGAAGTGTGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	83303017	83320678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_83303250_83306851_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
m54284U_201201_044215/161808478/ccs	chr11	-	8578	35	NIC	ENSMUSG00000020315.19	novel	8238	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	341	junction_32	94.310427564532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTATGACTAGCCGGTGT	1820	False	NA	-8	True	ATTAAA	-14	NA	30148257	30049395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
m54284U_201201_044215/161874488/ccs	chr10	-	174	1	Intergenic	novelGene_5393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATACATTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	70845465	70845291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_70845300_70845500
m54284U_201201_044215/161875662/ccs	chr10	-	189	1	Intergenic	novelGene_5328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGATAGATAGCCAGTT	NA	False	NA	NA	False	NA	NA	NA	61151114	61150925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_61150900_61151100
m54284U_201201_044215/16187789/ccs	chr7	+	3795	16	NIC	ENSMUSG00000035545.14	novel	502	5	NA	NA	-202	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	104.571379130876	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	403	False	NA	20	True	ATTAAA	-20	NA	4140358	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4140619_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
m54284U_201201_044215/16188277/ccs	chr7	+	3462	19	NNC	ENSMUSG00000055319.9	novel	4505	19	NA	NA	0	-1040	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	31.2793072450205	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTATTTTTATTTAAAT	1931	False	NA	40	True	ATTAAA	-28	NA	128346666	128385520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380789_128380950_128381359_128381462_128385151
m54284U_201201_044215/161939690/ccs	chr4	+	184	1	Intergenic	novelGene_2313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATTATAACATTTTAAAA	1941	False	NA	NA	False	NA	NA	NA	141821034	141821218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141821000_141821200
m54284U_201201_044215/162005564/ccs	chr12	+	3120	11	NIC	ENSMUSG00000020571.14	novel	2125	13	NA	NA	0	-405	intron_retention	FALSE	canonical	3	2594	junction_7	176.150390291932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAATGCTGATAAATGTA	NA	False	NA	9	True	AATAAA	-11	NA	17316595	17334366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
m54284U_201201_044215/162007127/ccs	chr2	-	1645	3	NNC	ENSMUSG00000087461.3	novel	2668	4	NA	NA	80982	-907	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	1	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATACTGTTTACCCTC	NA	False	NA	NA	False	NA	NA	NA	33916759	33909207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_33910509_33915810_33915970_33916574
m54284U_201201_044215/162007243/ccs	chr2	-	1786	14	NNC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	30.2142252636738	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4547	False	NA	-2	True	AATAAA	-20	NA	181223801	181210944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212349_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
m54284U_201201_044215/162070539/ccs	chr9	-	1766	5	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	2037.2819361836	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110773258_110773312_110774891
m54284U_201201_044215/162071224/ccs	chr2	+	2420	4	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	85	junction_1	35.2167889254858	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857984	119863075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_119858058_119860538_119860693_119860769_119862482_119862594
m54284U_201201_044215/162071743/ccs	chr5	-	3734	6	ISM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	-23	6293	0	2659	5prime_fragment	FALSE	canonical	3	151	junction_3	20.8096131631513	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGTGTGCTGCCTGCCT	NA	False	NA	NA	False	AATAAA	-11	NA	97259455	97241131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
m54284U_201201_044215/162071887/ccs	chr11	+	2261	11	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_2	36.0373417443629	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102992513	103003026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102992615_102993507_102993972_102994060_102994196_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
m54284U_201201_044215/162137944/ccs	chrX	+	180	1	Intergenic	novelGene_9656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAGAAAAAAAAGAACT	NA	False	NA	NA	False	NA	NA	NA	143271723	143271903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_143271700_143271900
m54284U_201201_044215/162202159/ccs	chr16	-	1201	6	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	646	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	2581.57180027982	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928929	95922787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_95923618_95925922_95926046_95928352_95928401_95928510_95928541_95928631_95928662_95928789
m54284U_201201_044215/162202422/ccs	chr19	+	2974	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	0	-2771	combination_of_known_splicesites	FALSE	canonical	2	19	junction_2	415.351835797075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919358	38956724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38919520_38919834_38919957_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
m54284U_201201_044215/162202965/ccs	chr9	+	184	1	Intergenic	novelGene_4642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGGAAACCGGATCCATA	NA	False	NA	NA	False	NA	NA	NA	15852795	15852979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_15852800_15853000
m54284U_201201_044215/162203273/ccs	chrX	-	183	1	Intergenic	novelGene_9485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTCAAAATTAAATGTT	NA	False	NA	NA	False	NA	NA	NA	59796562	59796379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_59796400_59796600
m54284U_201201_044215/162269544/ccs	chr6	+	255	1	Intergenic	novelGene_3354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	85053800	85054055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_85053800_85054100
m54284U_201201_044215/162334713/ccs	chr4	+	6367	39	NIC	ENSMUSG00000028456.19	novel	6354	39	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	7	junction_23	6.06086396664375	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGAGTCTGGAATTC	2	True	NA	12	True	AATAAA	-14	NA	43058952	43264871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_43059286_43087902_43087933_43091227_43091328_43095745_43095864_43096898_43097023_43101800_43101875_43115102_43115161_43165743_43165979_43180327_43180643_43182768_43182860_43230117_43230165_43232529_43232609_43234665_43234741_43235181_43235402_43236919_43237148_43237696_43237839_43239296_43239467_43239845_43239962_43240224_43240389_43241006_43241158_43243234_43243304_43244701_43244792_43245467_43245597_43249459_43249582_43250216_43250303_43255474_43255602_43255820_43255918_43256128_43256273_43256775_43256854_43257275_43257354_43257846_43257936_43258149_43258303_43258420_43258545_43258650_43258708_43258868_43258950_43259461_43259610_43261681_43261775_43262976_43263137_43263299
m54284U_201201_044215/162463811/ccs	chr11	-	2282	10	NNC	ENSMUSG00000039055.5	novel	2444	9	NA	NA	-74	0	at_least_one_novel_splicesite	TRUE	canonical	3	39	junction_7	78.9567782999419	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAGCTTGGAGGAAGAC	4622	False	NA	-5	True	AATAAA	-18	NA	94544571	94535821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540288_94540346_94540833_94540965_94541048_94541850_94544521
m54284U_201201_044215/162465212/ccs	chr9	-	1869	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	0	214	combination_of_known_junctions	FALSE	canonical	3	47	junction_10	61.1735236846791	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAATATTTGGATTTT	9248	False	NA	-20	True	AATAAA	-19	NA	26910845	26886457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903585_26910689
m54284U_201201_044215/162466416/ccs	chr14	+	2373	3	ISM	ENSMUSG00000041673.13	ENSMUST00000038956.12	2587	4	3883	0	0	0	3prime_fragment	FALSE	canonical	3	4	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAATAACATGGCTT	NA	False	NA	NA	False	AATAGA	-8	NA	32717221	32737248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_32717266_32730364_32731227_32735781
m54284U_201201_044215/162529323/ccs	chr9	+	2275	12	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	27.3208666053278	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	False	NA	19	True	AATAAA	-18	NA	78355494	78381434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368103_78368320_78368801_78368877_78372165_78372285_78377912_78378074_78381071
m54284U_201201_044215/162594890/ccs	chr11	-	2460	11	NNC	ENSMUSG00000042988.11	novel	2212	11	NA	NA	-104	0	intron_retention	FALSE	canonical	2	13	junction_5	31.3521929057602	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAAGCTCACCCTGAAC	9469	False	NA	NA	False	ATTAAA	-21	NA	120551759	120544613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547499_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
m54284U_201201_044215/162596259/ccs	chr11	+	4141	15	NIC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	525.878919291411	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883931	79924949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
m54284U_201201_044215/162597542/ccs	chr12	+	1654	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_3	144.53415668616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201201_044215/162660398/ccs	chr7	-	3416	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	59	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	285.415407137351	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	7301	False	NA	-7	True	NA	NA	NA	126101213	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101124
m54284U_201201_044215/162662597/ccs	chr1	+	3982	23	NNC	ENSMUSG00000026288.15	novel	577	3	NA	NA	181	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	126.783809287782	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9551	False	NA	19	True	AATAAA	-20	NA	87604141	87648229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87604309_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87642816_87642998_87643036_87645411_87646007_87647042
m54284U_201201_044215/162793306/ccs	chr7	-	3203	11	NIC	ENSMUSG00000051403.10	novel	3816	13	NA	NA	838	0	intron_retention	FALSE	canonical	3	100	junction_7	14.6574213284602	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCTCTGTTTCCTGC	8352	False	NA	-6	True	AATAAA	-15	NA	19296163	19264724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19265352_19265431_19265519_19265708_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
m54284U_201201_044215/162794313/ccs	chr2	+	2623	18	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	21.2762355855551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	8	True	AATAAA	-19	NA	32253072	32268311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
m54284U_201201_044215/162923032/ccs	chr2	+	1925	6	NNC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	0	-1365	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	151.072168184613	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCCTCCTTCTTCA	NA	False	NA	17	True	AATAAA	-17	NA	172212600	172223003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_172212734_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
m54284U_201201_044215/163054337/ccs	chr11	-	1015	3	NNC	ENSMUSG00000041629.8	novel	2619	3	NA	NA	288	-1590	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	675	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGTTTCCATGGGGAA	NA	False	NA	-18	True	AATAAA	-12	NA	113574693	113553734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113554370_113568129_113568230_113574413
m54284U_201201_044215/163054477/ccs	chr5	+	1541	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	442.714284273729	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTCTATTCCTTTT	5407	False	NA	43	True	AATAAA	-45	NA	100666308	100695669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_100666417_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
m54284U_201201_044215/163121663/ccs	chr7	-	178	1	Intergenic	novelGene_3752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAGCCACACATG	9790	False	NA	NA	False	NA	NA	NA	28799280	28799102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28799100_28799300
m54284U_201201_044215/16318479/ccs	chr18	-	3008	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	191	-225	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_16	1535.60645593199	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	390	False	NA	-17	True	AATAAA	-13	NA	35087219	35070691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35086847
m54284U_201201_044215/163185012/ccs	chr11	-	198	1	Intergenic	novelGene_6161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGATCCTTGTTTC	2217	False	NA	NA	False	NA	NA	NA	86873759	86873561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_86873600_86873800
m54284U_201201_044215/163186192/ccs	chr11	+	3660	23	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	34.3057472957617	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGTTTTAAGTA	NA	False	NA	25	True	AATAAA	-33	NA	84771135	84801957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
m54284U_201201_044215/163186794/ccs	chr4	-	3189	27	NNC	ENSMUSG00000040738.11	novel	3220	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_20	86.2362672370636	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTACAATTTAGTGGT	-1	True	NA	-14	True	ATTAAA	-20	NA	11254258	11204382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239432_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
m54284U_201201_044215/163186926/ccs	chr7	-	2086	10	NIC	ENSMUSG00000060601.14	novel	1948	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	253.147641496147	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTACAAGCCATTCC	NA	False	NA	-16	True	AATAAA	-15	NA	44203375	44199055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201768_44201930_44202045_44202120_44202182_44203002_44203133_44203232
m54284U_201201_044215/16319293/ccs	chr8	-	175	1	Intergenic	novelGene_4571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	123343899	123343724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_123343700_123343900
m54284U_201201_044215/16319444/ccs	chr16	+	174	1	Intergenic	novelGene_8155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCAAAGCCTGAA	5577	False	NA	NA	False	NA	NA	NA	21533041	21533215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_21533000_21533200
m54284U_201201_044215/16319661/ccs	chr7	-	867	8	NIC	ENSMUSG00000053565.11	novel	774	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_6	1203.94528318274	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTATTGTCTCTTGCCTGT	NA	False	NA	-5	True	AATAAA	-16	NA	28681208	28670797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679743_28679968_28681098
m54284U_201201_044215/163318048/ccs	chr9	+	5313	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	379	junction_13	74.9765249257448	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	953	False	NA	14	True	AATAAA	-19	NA	103182413	103227627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
m54284U_201201_044215/163381780/ccs	chr9	+	2423	7	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_3	6268.06052982544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715992_40716227
m54284U_201201_044215/163383698/ccs	chr8	+	1299	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	0	1286	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	2969.66322796037	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57965007	57967529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_57965282_57965608_57965783_57966095_57966242_57966323_57966499_57966999
m54284U_201201_044215/163447463/ccs	chr15	-	4275	27	ISM	ENSMUSG00000022377.17	ENSMUST00000177035.8	3228	28	37213	-908	0	0	3prime_fragment	FALSE	canonical	3	36	junction_5	23.2403508003955	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTTGTTTCTGGTCAC	NA	False	NA	-1	True	ATTAAA	-22	NA	64184522	63960387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
m54284U_201201_044215/163447978/ccschrUn	chrUn_JH584304v1	-	3111	6	Intergenic	novelGene_9768	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_4	134.863783129497	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
m54284U_201201_044215/163448083/ccs	chr3	+	4064	18	NIC	ENSMUSG00000053819.17	novel	3059	19	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	3.74258205190279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTGTCCATTTTTATT	NA	False	NA	7	True	AATAAA	-17	NA	126390608	126638560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595375_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126636406
m54284U_201201_044215/163512406/ccs	chr6	-	2507	11	NNC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	52	junction_7	681.261623754046	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	8956	False	NA	23	True	TTTAAA	-24	NA	47790298	47773074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47780958_47781133_47783439_47783579_47783939_47784146_47785108_47785278_47790150
m54284U_201201_044215/163514533/ccs	chr8	+	2395	16	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_14	65.8775294686199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792246	123824494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821896_123821975_123824132
m54284U_201201_044215/163578620/ccs	chr7	-	4271	22	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	324	junction_21	166.887513543916	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGACTTTTACTTTTTA	9496	False	NA	-78	True	NA	NA	NA	126102527	126090957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201201_044215/163580015/ccs	chr1	+	3235	13	NIC	ENSMUSG00000026276.21	novel	552	6	NA	NA	0	-527	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	275.834491437649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406944	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_93407037_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
m54284U_201201_044215/163580248/ccs	chr7	-	187	1	Intergenic	novelGene_3738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTACAGCTGAACCCTT	110	False	NA	NA	False	NA	NA	NA	28115245	28115058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28115100_28115200
m54284U_201201_044215/163644668/ccs	chr5	+	8150	52	NIC	ENSMUSG00000042010.17	novel	676	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	13.4690326470011	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGCCTTGATTTATT	NA	False	NA	9	True	AATAAA	-19	NA	114313966	114388822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_114314252_114322110_114322244_114326391_114326531_114328136_114328247_114328390_114328473_114329215_114329315_114329912_114330023_114330134_114330246_114333284_114333495_114333695_114333867_114334720_114334883_114336237_114336402_114338300_114338452_114338556_114338661_114339959_114340042_114341450_114341597_114342732_114342884_114345296_114345432_114347813_114347961_114348965_114349155_114350711_114350813_114351372_114351462_114351673_114351799_114354661_114354776_114354871_114354986_114355709_114355800_114356922_114357042_114361292_114361431_114361868_114361969_114362049_114362158_114363634_114363692_114363914_114363957_114364737_114364954_114366591_114366748_114367791_114367996_114368775_114368932_114370907_114371031_114371143_114371414_114373513_114373612_114374567_114374689_114376678_114376790_114377752_114377897_114378604_114378726_114379983_114380081_114382546_114382644_114383148_114383285_114383938_114384117_114384491_114384605_114386224_114386380_114386644_114386816_114386935_114387073_114387554
m54284U_201201_044215/163644828/ccs	chr11	-	1769	4	NIC	ENSMUSG00000058546.9	novel	560	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	10927	junction_1	3555.33189574319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTGCTTGTCATTTGT	5963	False	NA	-14	True	CATAAA	-1	NA	78074410	78071760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_78071824_78071979_78072050_78072242_78073813_78074344
m54284U_201201_044215/163645283/ccs	chr8	+	2206	18	NNC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_17	168.232846547395	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCAAGCTGGTAGAGTG	NA	False	NA	17	True	AATAAA	-24	NA	13807676	13831938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831465
m54284U_201201_044215/163710000/ccs	chr15	+	186	1	Intergenic	novelGene_7678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATAGTTCACCCAGTCA	NA	False	NA	NA	False	NA	NA	NA	36459656	36459842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_36459700_36459800
m54284U_201201_044215/163710021/ccs	chr2	+	154	1	Intergenic	novelGene_754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAAACTTTTCCCACCT	NA	False	NA	NA	False	NA	NA	NA	34656971	34657125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34657000_34657100
m54284U_201201_044215/163775221/ccs	chr19	-	155	1	Intergenic	novelGene_9201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	28899866	28899711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_28899700_28899900
m54284U_201201_044215/163775444/ccs	chr8	-	3351	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	132	junction_5	389.014712165224	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426975	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
m54284U_201201_044215/163776251/ccs	chr16	-	3218	7	NNC	ENSMUSG00000013089.16	novel	3773	13	NA	NA	-828	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	376.188080914617	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	NA	False	NA	-20	True	AATAAA	-15	NA	22221407	22200065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22221226
m54284U_201201_044215/163776856/ccs	chr7	-	183	1	Intergenic	novelGene_3989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAAGATTTGTTTATT	NA	False	NA	NA	False	NA	NA	NA	101497243	101497060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_101497100_101497200
m54284U_201201_044215/163777061/ccs	chr18	-	1114	7	NNC	ENSMUSG00000036223.17	novel	2630	7	NA	NA	0	-298	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	150.093766988802	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTTCAAAACGTAC	6765	False	NA	-19	True	AGTAAA	-16	NA	74340850	74329847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339833_74339956_74340664
m54284U_201201_044215/163841226/ccs	chr18	-	197	1	Intergenic	novelGene_9041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGGTAGGGGCTGGGG	NA	False	NA	NA	False	NA	NA	NA	77845171	77844974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77845000_77845200
m54284U_201201_044215/163841652/ccs	chr14	-	3336	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	31.7587355533972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032450	33958989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33989457_33990910_33991427_33991494_34030996_34031052_34032123
m54284U_201201_044215/163841866/ccs	chr6	+	155	1	Intergenic	novelGene_3444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTATGCTCTGACCACC	NA	False	NA	NA	False	NA	NA	NA	119430179	119430334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_119430200_119430300
m54284U_201201_044215/16384555/ccs	chr5	+	4106	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_4	626.478354685051	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/16386091/ccs	chr2	-	2589	16	NIC	ENSMUSG00000027546.16	novel	3729	28	NA	NA	-57	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_15	72.489508819476	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCAGGCTTTTCATTTT	2944	False	NA	-23	True	GATAAA	-16	NA	168512323	168476357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168511919
m54284U_201201_044215/16386333/ccs	chr11	+	2601	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-3959	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	2183.19729067256	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCATCTGGCAATGT	NA	False	NA	13	True	ATTAAA	-14	NA	55360543	55391705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
m54284U_201201_044215/163907175/ccs	chr17	-	3162	10	ISM	ENSMUSG00000063239.18	ENSMUST00000118161.3	4607	11	10695	8	593	0	3prime_fragment	FALSE	canonical	2	11	junction_6	4.15739709641549	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCGGCCTGCGTGTCCA	7395	False	NA	-8	True	AATAAA	-18	NA	27721685	27644880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27721620
m54284U_201201_044215/1639512/ccs	chr6	+	6510	9	NNC	ENSMUSG00000030275.7	novel	6433	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_4	112.716943602104	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCCATGTGGTTCATAC	NA	False	NA	25	True	AATAAA	-38	NA	143112979	143154272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143138586_143138688_143140957_143141042_143143130_143143292_143148804_143148879_143149109
m54284U_201201_044215/1639547/ccs	chr14	+	179	1	Intergenic	novelGene_7553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1653	False	NA	NA	False	NA	NA	NA	79518223	79518402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_79518200_79518400
m54284U_201201_044215/164038055/ccs	chr2	+	3745	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	275.689789437331	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6642	False	NA	14	True	AATAAA	-14	NA	29779245	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201201_044215/164038633/ccs	chr13	-	3377	13	NNC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	186	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_4	323.920214799193	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626376	111562213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574611_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
m54284U_201201_044215/1640424/ccs	chr13	+	2930	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	156.725435785715	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606889_55606961_55607594
m54284U_201201_044215/1640631/ccs	chr11	+	130	1	Intergenic	novelGene_6169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGTAACTGACAACCAAG	NA	False	NA	NA	False	NA	NA	NA	87233553	87233683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87233600_87233700
m54284U_201201_044215/164168134/ccs	chr11	-	179	1	Intergenic	novelGene_5851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	NA	NA	NA	55366436	55366257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_55366300_55366400
m54284U_201201_044215/164168897/ccs	chr17	-	3197	13	NIC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	207.733185574402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226939	29189853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
m54284U_201201_044215/164169597/ccs	chr8	-	1764	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	55.4532041566551	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003907	56984556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003579
m54284U_201201_044215/164234297/ccs	chr3	+	3102	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	198	junction_6	104.992335589529	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/164234331/ccs	chr2	+	2625	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	60.6148017815066	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274894_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201201_044215/164300143/ccs	chr8	-	3516	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	0	-183	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_10	317.098993417352	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438299	80410273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426042_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
m54284U_201201_044215/164301244/ccs	chr11	+	2766	5	NIC	ENSMUSG00000033953.11	novel	2859	6	NA	NA	53	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	276.552888251054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAATGTATTGTGTCAG	NA	False	NA	11	True	AATAAA	-15	NA	17109315	17150375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_17109543_17142956_17143134_17144216_17144277_17144668_17144854_17148258
m54284U_201201_044215/164430351/ccs	chr12	+	1981	4	NIC	ENSMUSG00000060950.13	novel	2131	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	70.7153920067383	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTCTTGTTCCCACA	NA	False	NA	5	True	AATAAA	-17	NA	111644549	111650336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111644596_111645036_111645397_111647235_111647503_111649028
m54284U_201201_044215/164431855/ccs	chr5	+	2513	14	NIC	ENSMUSG00000029141.17	novel	2499	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_11	26.2556840845094	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGATGATCATTCCC	NA	False	NA	11	True	AGTAAA	-21	NA	31684338	31711386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705957_31706026_31708056_31708127_31711082
m54284U_201201_044215/16449849/ccs	chr15	+	162	1	Intergenic	novelGene_7844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGATTTATTTATTAA	NA	False	NA	NA	False	NA	NA	NA	81543763	81543925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81543800_81543900
m54284U_201201_044215/16449873/ccs	chr5	-	4344	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_26	202.258768579895	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
m54284U_201201_044215/16449972/ccs	chr4	+	2552	5	Fusion	ENSMUSG00000078503.10_ENSMUSG00000078502.11	novel	1221	3	NA	NA	0	0	multi-exon	TRUE	canonical	0	0	junction_4	21.5580611373101	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	5019	False	NA	NA	False	NA	NA	NA	145241453	145351915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_+_145241589_145343640_145343746_145347127_145347255_145348721_145349454_145350462
m54284U_201201_044215/16450286/ccs	chr6	+	174	1	Intergenic	novelGene_3580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGTTACATATAT	NA	False	NA	NA	False	NA	NA	NA	148599611	148599785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_148599600_148599800
m54284U_201201_044215/164561288/ccs	chr3	-	173	1	Intergenic	novelGene_1520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATCCTGT	4692	False	NA	NA	False	NA	NA	NA	89345292	89345119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89345100_89345300
m54284U_201201_044215/164561495/ccs	chr4	+	209	1	Intergenic	novelGene_2445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGATTTTTTAAAAAGTA	NA	False	NA	NA	False	AAAAAG	-9	NA	156378543	156378752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156378500_156378800
m54284U_201201_044215/164626992/ccs	chr19	-	4226	25	NIC	ENSMUSG00000024855.11	novel	4869	24	NA	NA	0	-527	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	17.6493625947228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTGGGCTCCTGCCCCT	NA	False	NA	-3	True	AATAAA	-20	NA	5323147	5183712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566_5322836_5322951
m54284U_201201_044215/164627609/ccs	chr11	-	2478	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_13	1103.10076146326	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	9265	False	NA	-9	True	AATAAA	-45	NA	106679709	106672373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679524
m54284U_201201_044215/164628969/ccs	chr4	+	1399	7	NNC	ENSMUSG00000023286.17	novel	3339	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	407.279865557934	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	787	False	NA	37	True	TATAAA	-19	NA	156028317	156042171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039898_156040018_156040824_156040906_156041537
m54284U_201201_044215/164692945/ccs	chr7	-	1726	1	Antisense	novelGene_ENSMUSG00000035203.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTCCAATTTCAGAGTC	NA	False	NA	NA	False	NA	NA	NA	5096311	5094585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_5094600_5096300
m54284U_201201_044215/164759127/ccs	chr15	+	2752	7	NIC	ENSMUSG00000022270.17	novel	579	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	10.719919153924	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTTATGTGTATGCC	74	False	NA	21	True	TATAAA	-17	NA	25933637	25973773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_25933713_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
m54284U_201201_044215/164759361/ccs	chr15	+	5230	1	Intergenic	novelGene_7718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	55735056	55740286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_55735100_55740300
m54284U_201201_044215/164760267/ccs	chr14	-	3273	9	NIC	ENSMUSG00000021824.14	novel	6732	9	NA	NA	0	1199	combination_of_known_junctions	FALSE	canonical	3	5	junction_8	101.806188417011	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATGATTTTTAAAG	NA	False	NA	-16	True	AATAAA	-9	NA	21102188	21084882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21101963
m54284U_201201_044215/164824574/ccs	chr8	-	1562	11	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	38.0914688611505	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003907	56984556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003722
m54284U_201201_044215/164824754/ccs	chr9	-	3549	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	273	junction_15	367.010696316977	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	0	True	ACTAAA	-20	NA	64080185	64044425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
m54284U_201201_044215/164824757/ccs	chrX	+	3901	18	NIC	ENSMUSG00000035967.16	novel	3611	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_10	16.0656094259874	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTAGGTGTATGTCTCTT	NA	False	NA	19	True	AATAAA	-30	NA	55500216	55553203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
m54284U_201201_044215/164825619/ccs	chr11	+	3519	18	ISM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	-149	4417	-149	-4414	5prime_fragment	FALSE	canonical	3	629	junction_13	50.0992786002251	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAATTAATTTTCAGT	NA	False	NA	NA	False	GATAAA	-28	NA	57899740	57948443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086
m54284U_201201_044215/164955965/ccs	chr5	+	4073	6	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1984	junction_3	135.88141889162	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493760	34510780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34507416_34508133_34508183_34508574
m54284U_201201_044215/165021656/ccs	chr3	+	3119	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	66.6374009838059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	10	True	AATAAA	-19	NA	116306776	116343630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_116306841_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
m54284U_201201_044215/165022019/ccs	chr10	-	3233	11	NNC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_2	20.7605394920267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	-11	True	ATTAAA	-13	NA	87982795	87927293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_87929049_87929456_87929593_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
m54284U_201201_044215/165151418/ccs	chr5	+	3329	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_14	69.4558185225946	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952091	86984518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
m54284U_201201_044215/165152238/ccs	chr2	-	7649	11	ISM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	-5	-51	0	0	intron_retention	FALSE	canonical	3	279	junction_2	48.9693781867812	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTCTTGTCTGCGTGTT	6012	False	NA	-7	True	ATTAAA	-14	NA	113679006	113661839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
m54284U_201201_044215/16517401/ccs	chr17	+	2305	16	NIC	ENSMUSG00000002833.12	novel	2264	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	148	junction_6	209.929787204092	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTATTGGCTTAGGTGC	NA	False	NA	NA	False	TATAAA	-25	NA	56386637	56407607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
m54284U_201201_044215/16517481/ccs	chr12	+	4398	15	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	190	junction_14	348.147077763267	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	False	NA	3	True	AATAAA	-17	NA	110413553	110549496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
m54284U_201201_044215/165216950/ccs	chr1	-	5312	2	Intergenic	novelGene_549	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGAGCTTTGTCTTGGTTC	NA	False	NA	NA	False	NA	NA	NA	190881781	190874577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_190878922_190880813
m54284U_201201_044215/165413542/ccs	chr11	+	9177	14	NIC	ENSMUSG00000037926.16	novel	4475	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	3.58497852237878	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCAAGTGTAACA	3628	False	NA	10	True	AATAAA	-20	NA	77239107	77351046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
m54284U_201201_044215/165544017/ccs	chr4	-	177	1	Intergenic	novelGene_2268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTTAAAAAGTAAAGA	NA	False	NA	NA	False	NA	NA	NA	137119738	137119561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_137119600_137119700
m54284U_201201_044215/165545109/ccs	chr7	+	4068	11	NIC	ENSMUSG00000030759.17	novel	4962	13	NA	NA	0	427	combination_of_known_splicesites	FALSE	canonical	2	15	junction_8	124.397588401062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTATTGTATTTTTACA	NA	False	NA	NA	False	AATAAA	-24	NA	113113068	113170092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113160582_113160713_113165591_113165720_113167301
m54284U_201201_044215/165545340/ccs	chr17	+	2463	21	NIC	ENSMUSG00000071054.13	novel	3106	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	163.134790893911	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGACTTTCAACCTCTC	7985	False	NA	35	True	AATAAA	-26	NA	56891981	56913294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56892044_56892186_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
m54284U_201201_044215/165611745/ccs	chr17	+	5179	1	Intergenic	novelGene_8593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	40489663	40494842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_40489700_40494800
m54284U_201201_044215/165676034/ccs	chr17	-	6940	13	NIC	ENSMUSG00000024122.17	novel	7161	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	41.2764225140159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGTTTGCCATGGAG	NA	False	NA	-6	True	AATAAA	-15	NA	24360569	24292656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24298117_24298465_24298619_24299351_24299410_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
m54284U_201201_044215/165677314/ccs	chr6	-	3131	17	NIC	ENSMUSG00000053470.14	novel	4753	26	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_16	78.1394736592844	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71586068	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
m54284U_201201_044215/165677860/ccs	chr3	-	5237	9	NNC	ENSMUSG00000027957.14	novel	1791	9	NA	NA	0	-249	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	71.7282196907187	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTTCTATATTTCCA	2189	False	NA	-19	True	CATAAA	-9	NA	116505906	116463367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_116467368_116468819_116468954_116469510_116469665_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
m54284U_201201_044215/165740577/ccs	chr4	+	2493	1	Intergenic	novelGene_1961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCCCAGGACCA	NA	False	NA	NA	False	NA	NA	NA	101711714	101714207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_101711700_101714200
m54284U_201201_044215/165742262/ccs	chr4	+	7052	6	NIC	ENSMUSG00000035572.17	novel	7250	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	28.039971469315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGAATGTAGTGGAAAAT	2	True	NA	50	True	NA	NA	NA	45342100	45379759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_45342728_45348105_45348220_45370305_45370509_45372663_45372775_45372923_45373070_45373908
m54284U_201201_044215/165806620/ccs	chr8	-	2166	1	Intergenic	novelGene_4468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATTTTTAACATTTCT	NA	False	NA	NA	False	NA	NA	NA	107836190	107834024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107834000_107836200
m54284U_201201_044215/165807230/ccs	chr5	+	6161	9	NIC	ENSMUSG00000029381.17	novel	687	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_1	36.4946485803056	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATGGAGATTTTTGCG	NA	False	NA	17	True	AATGAA	-22	NA	93073265	93113177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_93073342_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
m54284U_201201_044215/165807263/ccs	chr11	+	4009	13	NIC	ENSMUSG00000020271.18	novel	3821	13	NA	NA	0	94	combination_of_known_splicesites	FALSE	canonical	3	40	junction_2	145.006225919978	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTGCTAAGTAATGTCA	NA	False	NA	-15	True	AATAAA	-25	NA	32592723	32696663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_32592936_32602747_32602905_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
m54284U_201201_044215/165808154/ccs	chr12	-	161	1	Intergenic	novelGene_6695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTTACTACCCTTTATT	5405	False	NA	NA	False	NA	NA	NA	71003852	71003691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71003700_71003900
m54284U_201201_044215/165808670/ccs	chr7	+	929	4	NIC	ENSMUSG00000042675.16	novel	973	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	89.6449787897918	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCTCACATGGAAT	8221	False	NA	17	True	AATAAA	-18	NA	126376126	126379686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_126376276_126376942_126377126_126377477_126377587_126379198
m54284U_201201_044215/165871746/ccs	chr2	+	2456	11	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_6	108.010925373316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952141	173964495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961297_173961453_173962019_173962121_173962336_173962918_173963271_173963383_173963883
m54284U_201201_044215/165874101/ccs	chr4	-	199	1	Intergenic	novelGene_1834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATTAGTTATAATACTG	NA	False	NA	NA	False	NA	NA	NA	44093688	44093489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_44093500_44093700
m54284U_201201_044215/165874240/ccs	chr1	+	2609	6	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1025	junction_2	56.3183806585381	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	46	False	NA	32	True	NA	NA	NA	180731887	180735653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_180732096_180732308_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
m54284U_201201_044215/165939741/ccs	chr2	+	5395	39	NNC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-237	0	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_19	23.668415785962	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135501236	135856513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803635_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
m54284U_201201_044215/165940057/ccs	chr15	+	136	1	Intergenic	novelGene_7697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCTTTAAGAGTCTTGA	NA	False	NA	NA	False	NA	NA	NA	41210851	41210987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_41210900_41211000
m54284U_201201_044215/166068600/ccs	chr5	-	3985	6	NIC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	0	-464	intron_retention	FALSE	canonical	3	208	junction_1	174.069641235915	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTGTGAACTCTGAGG	NA	False	NA	NA	False	AATAAA	-18	NA	121045584	121034782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_121035088_121035242_121035270_121036381_121036536_121037135_121040118_121043658_121043948_121045356
m54284U_201201_044215/166069760/ccs	chr2	-	3263	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_6	81.7414623472486	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277324_26277567_26277684_26278503_26278573_26279160
m54284U_201201_044215/166133900/ccs	chr9	+	1626	13	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_4	1708.90399208577	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765781	108778691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773703_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
m54284U_201201_044215/166134826/ccs	chr11	+	1783	7	NIC	ENSMUSG00000014177.11	novel	1784	7	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	171.994831963702	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGATGTGTGGTCCCATT	9363	False	NA	10	True	TATAAA	-18	NA	62770402	62786011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_62770543_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
m54284U_201201_044215/166135907/ccs	chrX	+	4951	8	NIC	ENSMUSG00000059327.10	novel	4942	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	7.75912892228587	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACATTATCTTGAGCTC	NA	False	NA	7	True	AATAAA	-18	NA	99019211	99444368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_99019783_99353599_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
m54284U_201201_044215/166135933/ccs	chr11	+	174	1	Intergenic	novelGene_5891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTATTTACTTATTT	NA	False	NA	NA	False	NA	NA	NA	60855866	60856040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_60855900_60856000
m54284U_201201_044215/166199401/ccs	chr11	+	1221	4	NNC	ENSMUSG00000020397.16	novel	331	4	NA	NA	0	70	at_least_one_novel_splicesite	TRUE	canonical	3	45	junction_2	207.467802053449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTATAAAATGTTTAGAT	NA	False	NA	8	True	AATAAA	-21	NA	46327751	46332424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_46327837_46330632_46330652_46330720_46330803_46331389
m54284U_201201_044215/166199932/ccs	chr4	-	2824	5	NIC	ENSMUSG00000073888.14	novel	590	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_4	9.06917857360853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCAAAAACTTCCGTCT	12	False	NA	-6	True	AATAAA	-17	NA	41774158	41769477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_41769655_41769843_41769977_41771137_41773525_41773735_41773804_41774099
m54284U_201201_044215/166202170/ccs	chr15	-	191	1	Intergenic	novelGene_7779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAACTAAATAAATAAACAA	NA	False	NA	NA	False	NA	NA	NA	76560953	76560762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76560800_76561000
m54284U_201201_044215/166264904/ccs	chr17	+	4556	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_13	39.6349040598651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703221_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
m54284U_201201_044215/166267387/ccs	chr2	+	5120	12	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	201	junction_1	25.4347325489125	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4045	False	NA	-41	True	NA	NA	NA	180609037	180624253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180615341_180615852_180615950_180618099_180618157_180619112_180621021_180621453_180621514_180622190_180622268_180622829
m54284U_201201_044215/166331049/ccs	chr19	-	7207	21	NIC	ENSMUSG00000054611.18	novel	7242	21	NA	NA	0	-57	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	34.6806502245849	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGCCTCCAATGGGAA	NA	False	NA	-50	True	AATAAA	-21	NA	4447123	4366254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4369310_4370179_4370396_4370925_4371085_4372410_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
m54284U_201201_044215/166331801/ccs	chr2	+	3424	3	NNC	ENSMUSG00000086152.2	novel	714	3	NA	NA	0	2391	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTTGTCTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	162964525	162988270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162964699_162982755_162983125_162985388
m54284U_201201_044215/166332215/ccs	chr11	-	806	6	NIC	ENSMUSG00000020415.17	novel	741	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	326	junction_1	4189.6791094307	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTGAATACTTAACCAA	NA	False	NA	-26	True	AATAAA	-20	NA	43317078	43311090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_43311236_43311854_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
m54284U_201201_044215/166397324/ccs	chr15	-	2982	11	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	3633	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	273.182374980525	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	2599	False	NA	-5	True	NA	NA	NA	88597610	88571236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_88572680_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88585162_88585474_88591236_88591498_88596818_88596968_88597057_88597132_88597500
m54284U_201201_044215/166398507/ccs	chr15	-	193	1	Intergenic	novelGene_7826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAGAGGCAATGAATCT	NA	False	NA	NA	False	NA	NA	NA	80866720	80866527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_80866500_80866700
m54284U_201201_044215/16647421/ccs	chr5	-	2889	17	NIC	ENSMUSG00000003623.5	novel	2996	18	NA	NA	-125	-178	intron_retention	FALSE	canonical	3	171	junction_8	19.5572077505967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGAGCTAGCAGCTTT	NA	False	NA	0	True	ATTAAA	-21	NA	9047167	9016210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
m54284U_201201_044215/16647923/ccs	chr9	-	3887	21	NIC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	0	398	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	10.7396461766671	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCATTTTTTTCTT	5322	False	NA	NA	False	NA	NA	NA	44876876	44836747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44874634_44874731_44876782
m54284U_201201_044215/166527068/ccs	chr2	+	2686	18	NIC	ENSMUSG00000039205.17	novel	2666	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	22.6857576160885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	8	True	AATAAA	-19	NA	32253021	32268311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261126_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
m54284U_201201_044215/166592989/ccs	chr1	-	3152	18	NNC	ENSMUSG00000026620.12	novel	4221	18	NA	NA	-384	-1456	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	12.8795323261824	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATAGTTGTCTAGATC	2872	False	NA	-4	True	AATAAA	-18	NA	184732151	184630441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_184631076_184633005_184633051_184637599_184637855_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
m54284U_201201_044215/166658798/ccs	chr4	+	2440	7	NIC	ENSMUSG00000028796.18	novel	2535	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	50.0513625078168	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	False	NA	20	True	AATAAA	-21	NA	128621377	128646674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_128621664_128637146_128637255_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
m54284U_201201_044215/166659074/ccs	chr5	+	174	1	Intergenic	novelGene_3059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAATTATTAAGCAATG	2497	False	NA	NA	False	NA	NA	NA	144681707	144681881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_144681700_144681900
m54284U_201201_044215/166660842/ccs	chr15	+	4116	14	NIC	ENSMUSG00000039458.16	novel	6840	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	75.3737825811583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGCAAGTTTGGAAGTG	20	True	NA	28	True	ATTAAA	-31	NA	12205113	12272080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
m54284U_201201_044215/166725709/ccs	chr17	+	3915	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_23	167.664216814441	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
m54284U_201201_044215/166790259/ccs	chr3	-	191	1	Intergenic	novelGene_1594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCATGTAATTGGCATA	NA	False	NA	NA	False	NA	NA	NA	100028017	100027826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_100027800_100028000
m54284U_201201_044215/166854756/ccs	chr5	+	2884	12	NNC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_10	36.5913325780124	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168039	146239684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236504_146236661_146238385
m54284U_201201_044215/166854838/ccs	chr5	+	182	1	Intergenic	novelGene_3080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATAGGTGTTTGGGTAT	6464	False	NA	NA	False	NA	NA	NA	148309670	148309852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_148309700_148309900
m54284U_201201_044215/166920350/ccs	chr10	+	2891	5	NIC	ENSMUSG00000038280.13	novel	3006	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	94.4679178345749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAATGTTGTAATTGAAT	NA	False	NA	9	True	AATAAA	-18	NA	42554911	42578455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_42555394_42568906_42569005_42572245_42572414_42574103_42574270_42576478
m54284U_201201_044215/166921456/ccs	chr6	-	176	1	Intergenic	novelGene_3508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAACAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125083279	125083103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_125083100_125083300
m54284U_201201_044215/166922371/ccs	chrX	+	2746	1	Intergenic	novelGene_9524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACATTGTTATTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	89818790	89821536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_89818800_89821500
m54284U_201201_044215/166986915/ccs	chr10	+	2467	5	NIC	ENSMUSG00000035852.12	novel	2414	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.24264068711928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGGAGCAGAGGATGTG	NA	False	NA	3	True	AATAAA	-17	NA	79658461	79666286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79658575_79661529_79663269_79663711_79663846_79665226_79665266_79665844
m54284U_201201_044215/167051352/ccs	chr11	+	1223	4	ISM	ENSMUSG00000020681.15	ENSMUST00000001964.8	2418	14	10341	-7	8944	0	intron_retention	FALSE	canonical	1	2	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGAGTCTGTGTCCCTT	NA	False	NA	NA	False	ATTAAA	-13	NA	105876374	105880086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_105876544_105876815_105876915_105878841_105878965_105879254
m54284U_201201_044215/167051786/ccs	chr10	+	4175	19	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_12	107.189243633012	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235753	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201201_044215/167053443/ccs	chr13	-	2221	16	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_15	1958.80486691928	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5164	False	NA	-5	True	AATAAA	-14	NA	58549917	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549611
m54284U_201201_044215/167053747/ccs	chrX	+	2251	9	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	76	junction_7	67.3163009604657	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326355	73333757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332626_73332710_73332789_73332904
m54284U_201201_044215/16713202/ccs	chr18	-	3187	10	ISM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	248912	-1446	-3832	0	3prime_fragment	FALSE	canonical	2	4	junction_2	10.3064165558269	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCAAAAACCT	NA	False	NA	NA	False	AATAAA	-10	NA	25638128	25610688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946
m54284U_201201_044215/167184035/ccs	chr2	-	4297	20	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	82.909322025152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656128	70542750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
m54284U_201201_044215/167248106/ccs	chr17	+	3789	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	156.645809781884	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
m54284U_201201_044215/167248830/ccs	chr17	+	3171	9	NIC	ENSMUSG00000024457.17	novel	3203	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_5	65.2246119191215	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCTGGTGCTGTCTCTT	NA	False	NA	31	True	AATAAA	-38	NA	37148064	37170290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37167093_37167117_37167547_37167664_37167880_37167914_37168291
m54284U_201201_044215/167249969/ccs	chr19	+	2459	5	NNC	ENSMUSG00000035342.15	novel	2694	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	59.4784624885345	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTTAAAAAAAAAA	95	False	NA	NA	False	NA	NA	NA	45006594	45015469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_45006670_45010044_45010276_45011980_45012644_45013157_45013419_45014240
m54284U_201201_044215/167380437/ccs	chr2	+	3657	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	268.155761574078	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201201_044215/167380857/ccs	chr17	+	4677	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_13	44.1044901245819	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
m54284U_201201_044215/167381730/ccs	chr11	-	209	1	Intergenic	novelGene_6382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGCTTTTCATTCCC	5621	False	NA	NA	False	NA	NA	NA	105969464	105969255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_105969300_105969500
m54284U_201201_044215/167578282/ccs	chr14	-	4233	20	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	90	0	intron_retention	TRUE	canonical	0	0	junction_7	39.4028838743781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGAGTCTTTGTAG	NA	False	NA	44	True	AATAAA	-18	NA	70391170	70375616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
m54284U_201201_044215/167578332/ccs	chr11	+	2138	12	NNC	ENSMUSG00000059552.14	novel	1772	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	779.63500678308	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_69471342_69471879_69472292_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
m54284U_201201_044215/167641129/ccs	chr8	+	2510	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	417.641726328019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201201_044215/167643666/ccs	chr2	-	2557	14	NIC	ENSMUSG00000040434.17	novel	2445	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	35.4661268514924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATGTGTGAGTGTTTTG	NA	False	NA	-5	True	GGGGCT	-43	NA	92201402	92195395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_92195841_92195971_92196168_92196263_92196414_92196662_92196942_92197360_92197522_92197613_92197770_92197883_92198010_92198098_92198212_92199612_92200007_92200204_92200329_92200521_92200605_92200910_92201009_92201083_92201239_92201325
m54284U_201201_044215/167707822/ccs	chr5	+	3518	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	198.084718127259	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCCGTTTTAATTC	9017	False	NA	14	True	AATAAA	-15	NA	130251175	130272507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_130251414_130258289_130258468_130260647_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
m54284U_201201_044215/167709515/ccs	chr1	-	144	1	Intergenic	novelGene_359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATATATAAA	NA	False	NA	NA	False	NA	NA	NA	137262761	137262617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_137262600_137262800
m54284U_201201_044215/16777232/ccs	chr11	-	1183	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_5	366.911215418662	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716693	117706351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716539
m54284U_201201_044215/167773526/ccs	chr7	-	196	1	Intergenic	novelGene_4095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCATTAGGCTCATCC	NA	False	NA	NA	False	NA	NA	NA	126759090	126758894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_126758900_126759100
m54284U_201201_044215/16779517/ccs	chr11	-	166	2	Intergenic	novelGene_6110	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	80179042	80177018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80177135_80178992
m54284U_201201_044215/16779537/ccs	chr6	+	6549	13	NIC	ENSMUSG00000005225.16	novel	6739	14	NA	NA	65	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	77.1384037515253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGGGTTTTGCTTAAC	NA	False	NA	32	True	AATAAA	-42	NA	54572160	54622824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_54572457_54590076_54590194_54592199_54592356_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
m54284U_201201_044215/167838091/ccs	chr17	+	4888	24	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_14	27.4722062674673	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATTTTTATTTTGACT	NA	False	NA	20	True	NA	NA	NA	25352364	25381078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372718_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
m54284U_201201_044215/167838529/ccs	chr14	-	3786	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	59.493954417612	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	False	NA	-16	True	AATAAA	-18	NA	60488880	60455526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_60457608_60459031_60459128_60460816_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
m54284U_201201_044215/167839608/ccs	chr19	+	1661	8	NNC	ENSMUSG00000064105.14	novel	4955	8	NA	NA	-46154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	43.6507474747231	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGTGCCAAGTCTGTCG	NA	False	NA	13	True	AAGAAA	-15	NA	46807944	46867018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46808062_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
m54284U_201201_044215/167839691/ccs	chr4	-	3749	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_13	70.1036035839604	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7420	False	NA	-6	True	TATAAA	-12	NA	155753655	155739139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
m54284U_201201_044215/167904043/ccs	chr16	+	3872	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	170	intron_retention	FALSE	canonical	3	3297	junction_8	380.775503906173	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGTTCACAAAATTCCTA	NA	False	NA	-7	True	NA	NA	NA	84571166	84620088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84615664_84618147_84618191_84619674
m54284U_201201_044215/167969225/ccs	chr6	-	2039	15	NIC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	268	1011	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	136.261752910061	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGGGTAAGGAAAGAGAA	NA	False	NA	NA	False	AATATA	-42	NA	49190827	49064050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082640_49084275_49084399_49085859_49085995_49094085_49094368_49111628_49111693_49111780_49111833_49145403_49145453_49190200_49190262_49190578
m54284U_201201_044215/167970887/ccs	chr9	-	177	1	Intergenic	novelGene_5104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAATCCAAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	109955713	109955536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_109955500_109955700
m54284U_201201_044215/168034799/ccs	chr9	+	1810	5	NNC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_1	154.752019372931	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	4635	False	NA	23	True	AATAAA	-17	NA	65583860	65597582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_65584048_65593480_65593636_65595079_65595256_65596102_65596189_65596376
m54284U_201201_044215/168035071/ccs	chr11	-	165	1	Intergenic	novelGene_6227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCTTTAA	NA	False	NA	NA	False	NA	NA	NA	95437346	95437181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95437200_95437300
m54284U_201201_044215/168099871/ccs	chr18	+	206	1	Intergenic	novelGene_8904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAAAGCAACCTTACTC	NA	False	NA	NA	False	CATAAA	-11	NA	36044991	36045197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_36045000_36045200
m54284U_201201_044215/168100431/ccs	chr9	+	184	1	Intergenic	novelGene_4736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAAACCACAGCTTTGT	2546	False	NA	14	True	NA	NA	NA	44485749	44485933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_44485700_44485900
m54284U_201201_044215/168100441/ccs	chr2	+	3328	8	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	227	junction_5	21.7649784220956	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390870	25395483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
m54284U_201201_044215/168100485/ccs	chr11	+	171	1	Intergenic	novelGene_6162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCCATTTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	86889167	86889338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_86889200_86889300
m54284U_201201_044215/168101309/ccs	chr12	-	2899	10	NIC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	11114	junction_6	1479.99883216504	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662723	110657461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110658084_110658547_110658882_110659037_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
m54284U_201201_044215/168101588/ccs	chr4	-	2414	7	NIC	ENSMUSG00000073771.12	novel	1620	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	7.02376916856849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTAATGTCAGCATTCAA	9707	False	NA	-14	True	NA	NA	NA	116982855	116976415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116982525
m54284U_201201_044215/168102719/ccs	chr4	+	179	1	Intergenic	novelGene_1956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCTTTCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100718978	100719157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_100719000_100719200
m54284U_201201_044215/168165879/ccs	chr4	+	5650	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	237	junction_13	300.621053406908	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	591	False	NA	17	True	ATTAAA	-27	NA	137321538	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201201_044215/168166103/ccs	chr7	-	6141	31	NIC	ENSMUSG00000030491.17	novel	3651	30	NA	NA	0	2151	combination_of_known_junctions	FALSE	canonical	3	17	junction_19	212.327472446586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGTTTCTTGTTCTGT	NA	False	NA	-6	True	AATAAA	-18	NA	35237118	35166371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_35168618_35169090_35169158_35169241_35169396_35169477_35169592_35169681_35169746_35170616_35170727_35175357_35175531_35177478_35177572_35179565_35179777_35180441_35180630_35182464_35182565_35184629_35184851_35185024_35185165_35185844_35185963_35186578_35186708_35186956_35187149_35188061_35188190_35188623_35188781_35189354_35189541_35193254_35193363_35193695_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
m54284U_201201_044215/168167836/ccs	chr11	-	1765	8	NNC	ENSMUSG00000001891.17	novel	2044	10	NA	NA	-6803	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	143.823020495642	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTGTCTAGTGCTCA	NA	False	NA	-7	True	AATAAA	-21	NA	21286695	21271672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21286551
m54284U_201201_044215/168232001/ccs	chr3	-	185	1	Intergenic	novelGene_1430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAACAACCTGAAG	NA	False	NA	NA	False	NA	NA	NA	69535503	69535318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_69535300_69535500
m54284U_201201_044215/168233674/ccs	chr17	+	1310	4	NIC	ENSMUSG00000037089.12	novel	850	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_3	193.511986421743	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGCCAGCTCTAATGG	NA	False	NA	7	True	AATAAA	-16	NA	45874889	45876981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_45874995_45875505_45875700_45875850_45876006_45876125
m54284U_201201_044215/168297689/ccs	chr1	+	2893	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	121.367631767355	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720538_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201201_044215/168298407/ccs	chr15	-	173	1	Intergenic	novelGene_7645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	12337612	12337439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_12337400_12337600
m54284U_201201_044215/168364165/ccs	chr7	+	2727	5	NIC	ENSMUSG00000004610.5	novel	893	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1745	junction_1	116.056020955399	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCCTCTTTCCTCATTC	1955	False	NA	35	True	AATAAA	-18	NA	43093553	43107207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43106062_43106993
m54284U_201201_044215/168430056/ccs	chr6	+	1023	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	0	-251	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	398.212706979574	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTAAGAAGTTAGAGCA	1344	False	NA	32	True	ATTAAA	-19	NA	124807179	124810244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_124807237_124807465_124807614_124808328_124808452_124809108_124809403_124809528_124809633_124809947
m54284U_201201_044215/16843417/ccs	chr16	+	5453	33	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	299	junction_5	342.282755006734	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494509_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201201_044215/16843459/ccs	chr15	-	3437	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_7	46.6561893000275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713764	75626278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
m54284U_201201_044215/168494539/ccs	chr9	+	5221	27	NIC	ENSMUSG00000032216.16	novel	5499	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	777.694571251366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGCTCCGTTACCTAAA	NA	False	NA	NA	False	AATAAA	-27	NA	72569719	72657134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
m54284U_201201_044215/168626362/ccs	chr3	-	165	1	Intergenic	novelGene_1457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAGAAAGAAACCAGA	NA	False	NA	NA	False	NA	NA	NA	85947606	85947441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_85947400_85947600
m54284U_201201_044215/168626432/ccs	chr8	-	136	1	Intergenic	novelGene_4444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106526709	106526573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106526600_106526700
m54284U_201201_044215/168689684/ccs	chr17	+	3885	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	184.12314248139	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201201_044215/168689697/ccs	chr2	+	4056	16	NIC	ENSMUSG00000027067.17	novel	2739	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1260	junction_7	143.632803433694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTCCTTATGTCTCCTT	NA	False	NA	23	True	AATAAA	-19	NA	84867577	84877453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_84867673_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
m54284U_201201_044215/168690698/ccs	chr3	-	3375	15	NIC	ENSMUSG00000028078.15	novel	3486	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	82.5450093671845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	False	NA	-9	True	AATAAA	-14	NA	86827686	86693465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_86694720_86699375_86699419_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
m54284U_201201_044215/168756055/ccs	chr3	+	175	1	Intergenic	novelGene_1654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTTTAAAGGTTTAATA	NA	False	NA	NA	False	NA	NA	NA	121285346	121285521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_121285300_121285500
m54284U_201201_044215/168756946/ccs	chr17	-	3508	15	NNC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_11	144.534580284301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557425_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201201_044215/168757425/ccs	chr2	+	5536	22	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	0	0	intron_retention	TRUE	canonical	1	2	junction_1	78.6068606977332	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29509781	29630375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29510076_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
m54284U_201201_044215/168821921/ccs	chr16	+	2973	19	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	112.156209957803	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688828	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_16688920_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
m54284U_201201_044215/168822675/ccs	chr9	-	1576	4	NIC	ENSMUSG00000001348.16	novel	1447	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	129	junction_3	59.7457576364679	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	8896	False	NA	-19	True	AATAAA	-21	NA	22043127	22038022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_22038559_22038970_22039317_22040826_22041426_22043032
m54284U_201201_044215/168822968/ccs	chr12	-	156	1	Intergenic	novelGene_6754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAATAAATAATCAAAA	NA	False	NA	NA	False	NA	NA	NA	80490143	80489987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80490000_80490100
m54284U_201201_044215/169017921/ccs	chr2	+	3277	17	NNC	ENSMUSG00000027115.15	novel	3369	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_16	78.8546923144083	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTGGTTTTCCTGTTTT	1464	False	NA	25	True	ATTAAA	-16	NA	109111170	109172092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169018_109171502
m54284U_201201_044215/169018668/ccs	chr5	-	2255	6	NNC	ENSMUSG00000039244.11	novel	2208	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	52.428999608995	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGCATTGTGGGGTTTT	NA	False	NA	-7	True	AATAAA	-17	NA	143301115	143286963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300608
m54284U_201201_044215/169018732/ccs	chr1	-	2754	16	NIC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	72	junction_6	836.668934923884	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287401	128259326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
m54284U_201201_044215/169018959/ccs	chr12	+	1686	8	NIC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_4	137.349249457471	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201201_044215/169083251/ccs	chr4	-	180	1	Intergenic	novelGene_1736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATAGGAAA	NA	False	NA	NA	False	NA	NA	NA	10484066	10483886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_10483900_10484100
m54284U_201201_044215/169085103/ccs	chr15	+	161	1	Intergenic	novelGene_7897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTAAAAAAAGACTTG	NA	False	NA	NA	False	NA	NA	NA	88363432	88363593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_88363400_88363600
m54284U_201201_044215/16908925/ccs	chr2	-	1317	4	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	159.674669249697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26277567_26277684_26279160
m54284U_201201_044215/16911084/ccs	chr6	+	1962	10	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	0	-97	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	225.849015445668	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATGCTTGTGTGACTA	NA	False	NA	23	True	AATAAA	-19	NA	113023287	113045137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_113023352_113024377_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
m54284U_201201_044215/169150455/ccs	chr10	+	5694	16	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	828	junction_12	99.7626962123396	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171916	21244797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
m54284U_201201_044215/169216391/ccs	chr7	+	684	7	NIC	ENSMUSG00000030672.13	novel	268	4	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	184	junction_1	671.232365793612	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	3976	False	NA	32	True	AATAAA	-24	NA	126811795	126813460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_126811880_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
m54284U_201201_044215/169216519/ccs	chr3	+	1091	11	NIC	ENSMUSG00000074182.9	novel	1127	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	233.599143834047	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGCATGTTACTGCC	NA	False	NA	49	True	ATTAAA	-23	NA	145281986	145309868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_145282040_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
m54284U_201201_044215/169282297/ccs	chr4	-	190	1	Intergenic	novelGene_1779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGGCTGTAGGCAGGCC	NA	False	NA	NA	False	NA	NA	NA	32606384	32606194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_32606200_32606400
m54284U_201201_044215/169347811/ccs	chr1	+	2859	1	NIC	ENSMUSG00000067017.6	novel	2858	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATCCATGCCACACTG	NA	False	NA	NA	False	AATAAA	-29	NA	105383695	105386554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_105383700_105386600
m54284U_201201_044215/169410589/ccs	chr5	+	1893	7	NIC	ENSMUSG00000029344.16	novel	1813	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	128.99956933606	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGTGAGTAGCTTTCT	NA	False	NA	21	True	AATAAA	-31	NA	112424569	112463221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_112424638_112451765_112451838_112455431_112456421_112457554_112457754_112459549_112459601_112461107_112461157_112462756
m54284U_201201_044215/169410788/ccs	chr6	-	176	1	Intergenic	novelGene_3101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCACAAGGCTTT	NA	False	NA	NA	False	NA	NA	NA	4949111	4948935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_4948900_4949100
m54284U_201201_044215/169412017/ccs	chr15	-	1414	6	NIC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	98.7825895590918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTTTGTATTTGATT	NA	False	NA	-5	True	AATGAA	-40	NA	27630779	27606004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27630543
m54284U_201201_044215/169412360/ccs	chr1	-	6654	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_41	271.700965464141	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816744_84816835_84816949
m54284U_201201_044215/169476898/ccs	chr11	-	199	1	Intergenic	novelGene_5929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATGAGCCGGGCGCGGT	NA	False	NA	NA	False	NA	NA	NA	68704861	68704662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68704700_68704900
m54284U_201201_044215/169541671/ccs	chr4	+	4678	10	NIC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1867	junction_1	637.798547861565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575826	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
m54284U_201201_044215/169542785/ccs	chr12	-	208	1	Intergenic	novelGene_6630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCCTGGAGATGTGTGG	7979	False	NA	NA	False	NA	NA	NA	51986113	51985905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_51985900_51986100
m54284U_201201_044215/169543041/ccs	chr13	+	2031	6	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	32.2391066873758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	6	True	AATAAA	-19	NA	55747877	55758256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55748006_55751932_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
m54284U_201201_044215/169608659/ccs	chr7	-	4799	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_7	44.8182091900156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
m54284U_201201_044215/169609181/ccs	chr5	-	5743	16	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	132.256753660782	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114131828	114077825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114119856_114119962_114127706_114127748_114131724
m54284U_201201_044215/169609447/ccs	chr13	+	3604	10	NIC	ENSMUSG00000021712.16	novel	3546	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_9	72.9410382550756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGGAGTTGTTATTCTAA	NA	False	NA	2	True	AATAAA	-12	NA	104315346	104339880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104337738
m54284U_201201_044215/169673030/ccs	chr18	+	1142	3	NNC	ENSMUSG00000024513.17	novel	1290	3	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	155	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGAAGTGCCTGGTGT	NA	False	NA	13	True	AATAAA	-30	NA	70701513	70715983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_70702039_70713723_70713884_70715526
m54284U_201201_044215/169674727/ccs	chr7	-	3834	5	NIC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	0	1644	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	64.0722248716244	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713540	27686492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27713440
m54284U_201201_044215/169674768/ccs	chr2	-	5663	18	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	761	junction_17	284.513778164429	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627944	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
m54284U_201201_044215/169675200/ccs	chr6	+	5127	25	NIC	ENSMUSG00000029804.18	novel	3596	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	7.34551544973001	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808449	58897383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
m54284U_201201_044215/16974417/ccs	chr13	-	4761	15	NIC	ENSMUSG00000033102.16	novel	3075	15	NA	NA	0	-1134	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	21.3508112927154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTGCCACAATCAAGGG	9676	False	NA	NA	False	NA	NA	NA	64422802	64341492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_64344490_64344793_64344860_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
m54284U_201201_044215/16974884/ccs	chr11	-	1568	5	NIC	ENSMUSG00000051232.14	novel	1347	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	479	junction_4	36.9425229241318	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATCTTTGGTCTTAAA	1631	False	NA	-29	True	AATAAA	-21	NA	78402998	78397880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_78398632_78399144_78399522_78400550_78400641_78401173_78401248_78402722
m54284U_201201_044215/169804214/ccs	chr2	-	1890	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1092	junction_4	84.0514128376198	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	32602796	32597449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
m54284U_201201_044215/169870973/ccs	chr11	+	2077	13	NIC	ENSMUSG00000034708.13	novel	2340	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_10	178.089143564552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTATCTGATTTGTTGCGC	4334	False	NA	17	True	AATAAA	-19	NA	102321343	102327635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326594_102326769_102326849_102327075_102327160
m54284U_201201_044215/169935973/ccs	chr7	-	5020	5	NNC	ENSMUSG00000030980.18	novel	5382	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	298.679175705304	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454907	118441444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_118445318_118447719_118447798_118449843_118449913_118451625_118452564_118454845
m54284U_201201_044215/170000717/ccs	chr5	+	213	1	Intergenic	novelGene_2575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAGGGCATTGTTGAG	NA	False	NA	NA	False	ATTAAA	-9	NA	53663865	53664078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_53663900_53664100
m54284U_201201_044215/170001333/ccs	chr4	-	183	1	Intergenic	novelGene_1922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCATAATGAATCTCATTA	NA	False	NA	NA	False	NA	NA	NA	85254401	85254218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_85254200_85254400
m54284U_201201_044215/170001817/ccs	chr15	+	210	1	Intergenic	novelGene_7790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAGCTGAACCACTGA	NA	False	NA	NA	False	NA	NA	NA	77219327	77219537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_77219300_77219500
m54284U_201201_044215/170066439/ccs	chr1	-	5672	29	NNC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	327	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_17	68.8865804739048	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACATAGCAGTGTATTG	9161	False	NA	78	True	AATAAA	-15	NA	97697809	97633772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_97635556_97639447_97639574_97640728_97640870_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668668_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
m54284U_201201_044215/170263830/ccs	chr17	-	1896	7	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	244.580593397487	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063121	47046681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47054310_47054369_47058346_47058471_47062898
m54284U_201201_044215/170328825/ccs	chr3	-	2070	3	NNC	ENSMUSG00000027860.16	novel	818	5	NA	NA	1851	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	65	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102071405	102064032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_102065814_102070614_102070850_102071351
m54284U_201201_044215/170328879/ccs	chr4	+	2744	16	Fusion	ENSMUSG00000028672.14_ENSMUSG00000028673.11	novel	2525	8	NA	NA	0	0	multi-exon	FALSE	canonical	2	13	junction_8	263.348404632005	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAACGTGTGTTTATGGG	NA	False	NA	NA	False	ATTAAA	-23	NA	135648045	135689928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384_135666517_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
m54284U_201201_044215/170394883/ccs	chrX	+	3691	12	NIC	ENSMUSG00000031207.17	novel	3842	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_2	325.017329480768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGACTCAGTCTTTCTG	NA	False	NA	6	True	AATAAA	-16	NA	95139702	95212158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_95139850_95185470_95185555_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
m54284U_201201_044215/170396227/ccs	chr9	+	180	1	Intergenic	novelGene_5014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAGAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	96314205	96314385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96314200_96314400
m54284U_201201_044215/17040496/ccs	chr5	+	4249	23	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.0259987326855	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	642	False	NA	4	True	TTTAAA	-7	NA	121849671	121953013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121952400
m54284U_201201_044215/17040610/ccs	chr19	-	3037	26	NNC	ENSMUSG00000039901.11	novel	3676	26	NA	NA	4896	-780	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_25	35.5729335309867	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCAAGGTGCCTACTTT	NA	False	NA	-6	True	AATAAA	-20	NA	45982031	45806582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45981817
m54284U_201201_044215/170459861/ccs	chr17	-	3497	8	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	157.427275078925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTTGCCGCTTACTTTT	NA	False	NA	0	True	AATAAA	-30	NA	53996361	53981813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53996238
m54284U_201201_044215/170461269/ccs	chr7	-	3274	11	NIC	ENSMUSG00000030557.18	novel	4759	11	NA	NA	0	441	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	12.5713961038542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATAAGGCGTTATTTA	NA	False	NA	NA	False	TATAAA	-15	NA	67022575	66883139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
m54284U_201201_044215/170461932/ccs	chr15	-	2052	18	NNC	ENSMUSG00000039828.8	novel	2126	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_14	101.173084758669	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATTTTGTCCTTTCT	NA	False	NA	-6	True	AATAAA	-14	NA	8128693	7902542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108757_8111945_8112067_8123159_8123244_8128439_8128506_8128602
m54284U_201201_044215/170524787/ccs	chr14	-	2719	19	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_10	111.61232785134	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACATTCTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	47655664	47625244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643323_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
m54284U_201201_044215/170524911/ccs	chr4	+	2356	16	NIC	ENSMUSG00000035683.14	novel	2955	18	NA	NA	57	-374	combination_of_known_splicesites	FALSE	canonical	2	9	junction_8	119.239926199239	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTATTTGGAGTGTGTTTT	13	True	NA	31	True	AATAAA	-32	NA	44300932	44364301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
m54284U_201201_044215/170524984/ccs	chr11	+	3195	5	NNC	ENSMUSG00000020453.18	novel	3702	5	NA	NA	-185	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	167.614140214959	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6267	False	NA	14	True	ATTAAA	-16	NA	3240253	3259083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647_3257881_3257988
m54284U_201201_044215/170525941/ccs	chr6	-	6223	22	NIC	ENSMUSG00000012535.15	novel	4251	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	521	junction_16	55.7753430190159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	3	True	NA	-2	True	TTTAAA	-5	NA	29609622	29540825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
m54284U_201201_044215/1705871/ccs	chr16	+	4296	5	NIC	ENSMUSG00000022686.15	novel	698	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	44.4690903887183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTAATGTGAATTTAA	NA	False	NA	7	True	AATAAA	-15	NA	19579148	19591213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_19579228_19579390_19579578_19582900_19583104_19583857_19583965_19587493
m54284U_201201_044215/170590983/ccs	chr1	-	186	1	Intergenic	novelGene_386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGTGGCCAAGGCAAC	NA	False	NA	NA	False	NA	NA	NA	153376810	153376624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153376600_153376800
m54284U_201201_044215/170591120/ccs	chr3	+	3277	3	NIC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	0	290	intron_retention	FALSE	canonical	3	130	junction_2	1620	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCGTACAGTAAGGTCAG	NA	False	NA	NA	False	NA	NA	NA	89995367	89999727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89997167_89997316_89997387_89998319
m54284U_201201_044215/170592849/ccs	chr10	-	4056	12	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	64.5122834097802	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATGGAATTTGTCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	85752850	85727833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739875_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
m54284U_201201_044215/1706032/ccs	chr2	-	509	1	Intergenic	novelGene_839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAGCTGCTTAAGGG	NA	False	NA	NA	False	NA	NA	NA	69760924	69760415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_69760400_69760900
m54284U_201201_044215/170657581/ccs	chr2	-	6810	4	NIC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	89.7416043736435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGATTTTTTTTT	NA	False	NA	-5	True	AATAAA	-19	NA	28730298	28712316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_28716810_28717489_28717579_28723561_28725386_28729894
m54284U_201201_044215/170722259/ccs	chr7	+	3950	6	NNC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_2	54.3080104588632	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248708	41277957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_41248825_41261099_41261320_41261794_41261922_41262579_41262676_41274146_41274257_41274676
m54284U_201201_044215/170787436/ccs	chr5	-	3128	9	NIC	ENSMUSG00000037373.13	novel	2279	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	693	junction_7	78.351372036487	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432338	33405066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_33406031_33406450_33406569_33406930_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
m54284U_201201_044215/170788557/ccs	chr16	-	1919	14	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	0	113	intron_retention	FALSE	canonical	3	4287	junction_8	386.88579113818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292761	87280762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
m54284U_201201_044215/170789334/ccs	chr4	-	3476	19	NNC	ENSMUSG00000028633.8	novel	2705	19	NA	NA	304	0	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_18	179.180610999139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGCTTTCTCTTGTC	NA	False	NA	-18	True	AATAAA	-14	NA	120427169	120397064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120426272
m54284U_201201_044215/170852559/ccs	chr7	+	4915	13	NIC	ENSMUSG00000030795.19	novel	4909	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	619	junction_3	224.540765910236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTCCCCCAGTTTAC	1184	False	NA	37	True	ATTAAA	-20	NA	127566662	127581204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
m54284U_201201_044215/170853284/ccs	chr15	+	2474	18	NNC	ENSMUSG00000022436.17	novel	1923	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_3	114.145690914398	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAACTGGCCAAACGAAAA	4398	False	NA	87	True	AATAAA	-20	NA	78783967	78796251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_78784162_78785345_78785389_78785598_78785704_78786794_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
m54284U_201201_044215/170853790/ccs	chr2	-	3391	17	ISM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	131	2089	0	0	5prime_fragment	FALSE	canonical	3	1726	junction_3	108.266742354243	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627318	103597451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
m54284U_201201_044215/170920700/ccs	chr2	+	2588	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	144.356246008868	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398175	144432669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_144398245_144401126_144401189_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
m54284U_201201_044215/170984368/ccs	chr10	-	701	4	NIC	ENSMUSG00000035215.10	novel	550	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	2087.59707691776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTCCCTTCCTGCTCT	NA	False	NA	-21	True	AATAAA	-17	NA	80691043	80688666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80688935_80689591_80689664_80690451_80690543_80690773
m54284U_201201_044215/170985499/ccs	chr9	-	4119	14	NIC	ENSMUSG00000025646.10	novel	4215	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	34.9887555902104	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTTGCCGCCTCTGC	NA	False	NA	-2	True	AATAAA	-15	NA	108903188	108887003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108887997_108888256_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
m54284U_201201_044215/170986019/ccs	chr2	-	2188	12	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	250	junction_9	27.0732095933591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9001	False	NA	-17	True	AATAAA	-17	NA	25246371	25242301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
m54284U_201201_044215/17104980/ccs	chr8	-	2942	8	NIC	ENSMUSG00000031823.15	novel	3069	8	NA	NA	160	-205	combination_of_known_junctions	FALSE	canonical	3	5	junction_7	30.1465806772611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCTGCAGCCCTC	NA	False	NA	-6	True	AATAAA	-18	NA	120828061	120807833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827592
m54284U_201201_044215/171050481/ccs	chr18	-	5078	9	NIC	ENSMUSG00000024431.16	novel	4989	9	NA	NA	-60	-281	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	16.8221394299298	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTTTGAATTCTCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	39623001	39545320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622529
m54284U_201201_044215/17105446/ccs	chr7	-	177	1	Intergenic	novelGene_3757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAACTTAAAAAAAAA	7263	False	NA	NA	False	NA	NA	NA	29225310	29225133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29225100_29225300
m54284U_201201_044215/17105602/ccs	chr4	-	4376	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	517	junction_11	115.160039556887	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
m54284U_201201_044215/17105615/ccs	chr4	+	172	1	Intergenic	novelGene_1937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTTTTTAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	96576372	96576544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_96576400_96576500
m54284U_201201_044215/17105748/ccs	chr3	-	5253	5	NIC	ENSMUSG00000044864.17	novel	7031	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	17.3781471969828	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTCCACTAACCTTC	NA	False	NA	-12	True	AATAAA	-17	NA	38538993	38506227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38537717_38538819
m54284U_201201_044215/17106778/ccs	chr17	+	1257	7	NIC	ENSMUSG00000007039.13	novel	682	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	154.377693408802	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	17	True	AATAAA	-23	NA	35278791	35281071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35278941_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
m54284U_201201_044215/17107749/ccs	chr15	-	2861	16	NNC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	202.347182392595	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614102	81588453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593738_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
m54284U_201201_044215/171114635/ccs	chr18	+	3767	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	-52	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	187.761305098542	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	-2	True	NA	NA	False	AATAAA	-22	NA	7869143	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921424_7921609_7921855_7921984_7926069
m54284U_201201_044215/171116088/ccs	chr14	+	2403	9	NIC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	0	-1440	intron_retention	FALSE	canonical	3	658	junction_1	26.9953699733862	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTTTATTTTATTT	NA	False	NA	23	True	NA	NA	NA	55983149	55991517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990506_55990716_55990823_55991097
m54284U_201201_044215/171116588/ccs	chr10	+	131	1	Intergenic	novelGene_5351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAACAAAAAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	62628399	62628530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62628400_62628500
m54284U_201201_044215/171181383/ccs	chr8	-	3745	21	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	142	junction_10	12.4843902534325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722123	12664278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
m54284U_201201_044215/171245976/ccs	chr8	+	4393	18	NIC	ENSMUSG00000031622.17	novel	4115	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_6	288.422988108098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCAGGGTCCTTCGTC	NA	False	NA	26	True	ATTAAA	-17	NA	73449917	73484829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483681_73483802
m54284U_201201_044215/171246105/ccs	chr7	-	1982	10	NIC	ENSMUSG00000002983.18	novel	2200	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	85.8855109296925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTCTTCTTTCTTCTT	NA	False	NA	-1	True	AATAAA	-20	NA	19362359	19340141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19361847_19361896_19362000
m54284U_201201_044215/171246477/ccs	chr5	+	3730	20	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_6	241.404420387916	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201201_044215/171376910/ccs	chr19	+	2555	9	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	116.004242918093	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043536	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38043766_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/171377388/ccs	chr1	-	2625	13	NIC	ENSMUSG00000026209.16	novel	2510	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	522	junction_12	129.205155555892	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294303	75285208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
m54284U_201201_044215/171377421/ccs	chr2	-	312	1	Intergenic	novelGene_668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTAGGAATGGGGGGT	NA	False	NA	NA	False	NA	NA	NA	29577804	29577492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29577500_29577800
m54284U_201201_044215/171444829/ccs	chr2	+	1430	12	NNC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-96	130	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	399.254304923566	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGGTATATAGCTGT	7090	False	NA	26	True	AATAAA	-23	NA	127432264	127445905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127432322_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
m54284U_201201_044215/171509111/ccs	chr9	+	2644	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	135.43129757791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201201_044215/171510144/ccs	chr8	+	2355	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	116	junction_1	116.737768809699	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415917	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85415979_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201201_044215/171574849/ccs	chr3	+	2826	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_23	119.269081933775	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/171575185/ccs	chr6	-	932	6	NIC	ENSMUSG00000014554.14	novel	1107	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_5	77.3356321497406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGTTCGTTTATTTC	NA	False	NA	-3	True	AATAAA	-23	NA	83483889	83457198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83483729
m54284U_201201_044215/171640455/ccs	chr17	+	4580	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_22	35.6367404896586	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
m54284U_201201_044215/17171558/ccs	chr8	-	1251	12	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	3555	junction_3	315.250392414277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321106	84298328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
m54284U_201201_044215/17172759/ccs	chr8	+	392	1	Intergenic	novelGene_4379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACAGGGTTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	85690918	85691310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_85690900_85691300
m54284U_201201_044215/171770960/ccs	chr13	+	2479	23	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_16	172.648193620236	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773277_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201201_044215/171771404/ccs	chr2	-	2700	12	NIC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	228	junction_1	23.6758411581395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGTCCTGATCCTTG	3112	False	NA	-13	True	AATAAA	-6	NA	155986100	155965569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
m54284U_201201_044215/171835848/ccs	chr4	-	5538	12	NIC	ENSMUSG00000014592.22	novel	8533	23	NA	NA	51	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	5.03541179059136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATCTGTGTTTTGCTTT	NA	False	NA	-2	True	ATTAAA	-20	NA	151192982	151143981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_151147313_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151192819
m54284U_201201_044215/171835935/ccs	chr9	+	181	1	Intergenic	novelGene_5120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGAATCTGAGAGG	NA	False	NA	NA	False	AATAAA	-7	NA	113002993	113003174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_113003000_113003200
m54284U_201201_044215/171836368/ccs	chr3	+	5053	4	NIC	ENSMUSG00000047213.15	novel	5102	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	192.77620876723	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237399	16271201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_16237685_16243641_16243728_16257989_16259589_16268118
m54284U_201201_044215/171837767/ccs	chr5	-	5825	16	NIC	ENSMUSG00000029207.17	novel	6540	16	NA	NA	0	-533	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	28.4436284605182	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGCACTGCTAATTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	66776031	66456715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
m54284U_201201_044215/171838203/ccs	chr7	+	200	1	Intergenic	novelGene_4098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTGCCATATTATGAGG	NA	False	NA	NA	False	NA	NA	NA	127062485	127062685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_127062500_127062700
m54284U_201201_044215/171901662/ccs	chr17	-	2242	7	NIC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	782.029553292088	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514733	80507508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
m54284U_201201_044215/171902528/ccs	chr6	-	191	1	Intergenic	novelGene_3104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAATTTCAACAAACAG	NA	False	NA	NA	False	NA	NA	NA	5556627	5556436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_5556400_5556600
m54284U_201201_044215/171902826/ccs	chr16	-	2470	7	ISM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	125	4632	0	-433	5prime_fragment	FALSE	canonical	3	51	junction_6	22.6697301851316	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATAGAGCATTATTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	22676294	22636595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
m54284U_201201_044215/171903136/ccs	chr14	-	3715	20	NIC	ENSMUSG00000021820.19	novel	3703	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	10.4229131778775	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTATTGCTGTTGG	NA	False	NA	0	True	AATAAA	-18	NA	20844156	20784942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
m54284U_201201_044215/171903161/ccs	chr13	+	2595	7	NIC	ENSMUSG00000021532.12	novel	2421	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	39.5010548382361	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTAATTGTCCGTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	68730381	68740398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
m54284U_201201_044215/171903238/ccs	chr7	+	2258	11	NIC	ENSMUSG00000030584.15	novel	2309	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	17.2568826848884	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTCCATCTCTAACCTC	1789	False	NA	10	True	ATTAAA	-26	NA	29003400	29017013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_29003538_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013707_29013828_29015048_29015162_29015668_29015751_29015905
m54284U_201201_044215/171967999/ccs	chr14	+	1503	10	NIC	ENSMUSG00000002326.7	novel	1993	10	NA	NA	0	434	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	39.4658783705058	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGTTCTTCTATACTTGA	NA	False	NA	27	True	ATTAAA	-28	NA	55909839	55916207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55909950_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
m54284U_201201_044215/171968168/ccs	chr19	+	1906	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_5	120.241631725455	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTTCTCTGTGCCTCG	4139	False	NA	18	True	AATAAA	-24	NA	41921928	41932543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927161_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
m54284U_201201_044215/171968266/ccs	chr8	+	2143	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	165.143770223857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415900	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85415979_85416260_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201201_044215/172032307/ccs	chr7	-	2183	10	NIC	ENSMUSG00000030541.17	novel	1790	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1495	junction_5	208.084918562911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765080	79744593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
m54284U_201201_044215/172032617/ccs	chr2	+	2087	12	NIC	ENSMUSG00000038696.15	novel	3018	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	61.6099433855197	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGTATGATGGACCATT	NA	False	NA	26	True	AATAAA	-20	NA	34296782	34513931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_34296861_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
m54284U_201201_044215/172032794/ccs	chr1	-	4192	11	NNC	ENSMUSG00000066595.10	novel	4040	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	11.1427106217473	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTATATGTCCTTTAA	NA	False	NA	-2	True	AATAAA	-17	NA	190758383	190738046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190752632_190752760_190753272_190753454_190757573
m54284U_201201_044215/172164159/ccs	chr5	+	3825	15	NIC	ENSMUSG00000029208.17	novel	3433	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_8	26.4487374799954	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGTGTTCTCTGTTCCTT	NA	False	NA	3	True	AATAAA	-14	NA	69714295	69729074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69725841_69726571_69726692_69728103_69728141_69728926
m54284U_201201_044215/172164338/ccs	chr2	-	183	1	Intergenic	novelGene_1111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAACAAAAGCACAACG	5784	False	NA	NA	False	NA	NA	NA	150632317	150632134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_150632100_150632300
m54284U_201201_044215/172164449/ccs	chr4	+	4377	17	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	200.90349634526	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/172294561/ccs	chr2	-	2061	17	NNC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	64	junction_9	708.326921233232	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022132	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003882_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
m54284U_201201_044215/172295616/ccs	chr2	+	3532	21	NIC	ENSMUSG00000027624.21	novel	6251	22	NA	NA	0	857	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	20.7663188841932	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAATTACCTGACTG	7784	False	NA	22	True	AATAAA	-32	NA	156262971	156382763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
m54284U_201201_044215/172296491/ccs	chr19	-	1806	4	NNC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	128.224629286091	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43663320	43652239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_43653083_43654210_43654268_43655082_43655583_43662914
m54284U_201201_044215/172359741/ccs	chr4	-	4214	8	NIC	ENSMUSG00000040928.16	novel	4059	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	49	junction_5	52.6272995037863	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1104	False	NA	-5	True	AATAAA	-15	NA	129083419	129041797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129076326_129077393_129077511_129083334
m54284U_201201_044215/172359786/ccs	chr17	+	269	1	Intergenic	novelGene_8620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAATAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	47094669	47094938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47094700_47094900
m54284U_201201_044215/17236871/ccs	chr12	+	2053	4	NNC	ENSMUSG00000114025.2	novel	1214	3	NA	NA	-10191	-533	intron_retention	FALSE	canonical	3	46	junction_1	45.4190366354119	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17942198	17954143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_17942310_17950660_17950788_17950987_17951049_17952389
m54284U_201201_044215/17237389/ccs	chr2	+	2595	10	NIC	ENSMUSG00000039263.17	novel	2467	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	247	junction_4	17.3980274176325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCTCCGCTCACTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	173952141	173964495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962918_173963271_173963383_173963883
m54284U_201201_044215/172425976/ccs	chr1	-	3123	21	NIC	ENSMUSG00000026594.15	novel	2958	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_16	84.0799619409999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACCTTTTCTTGTATG	NA	False	NA	-37	True	AATAAA	-32	NA	156767178	156635691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156720477_156720583_156728155_156728207_156729355_156729461_156735208_156735349_156767058
m54284U_201201_044215/172426171/ccs	chr14	-	2271	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	0	-4556	combination_of_known_splicesites	FALSE	canonical	2	5	junction_17	78.0284563476685	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGCTTTCCTAAACAAGA	NA	False	NA	-1	True	AATAAA	-22	NA	26692462	26645500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26684762_26684835_26685603_26685664_26686815_26686915_26692357
m54284U_201201_044215/172426738/ccs	chr19	+	5079	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	135.667013166571	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045019	46061240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
m54284U_201201_044215/172427422/ccs	chr17	-	1287	7	NNC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_3	576.260261417434	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6753	False	NA	-19	True	AATAAA	-15	NA	26051927	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050494_26050606_26050769_26050936_26051019_26051219_26051665
m54284U_201201_044215/172427598/ccs	chr9	-	1284	5	NNC	ENSMUSG00000000171.6	novel	1231	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	697.644967014025	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATATAATGAAAATACAT	NA	False	NA	NA	False	AATAAA	-3	NA	50515112	50507656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_50508551_50510060_50510206_50510767_50510821_50511847_50511965_50515037
m54284U_201201_044215/172427626/ccs	chr9	-	5537	19	NIC	ENSMUSG00000032064.18	novel	5719	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	10.077477638554	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATCCACTTCTTCATTTT	NA	False	NA	NA	False	AATAAA	-16	NA	50639275	50574055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
m54284U_201201_044215/172491726/ccs	chrX	-	4086	29	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_27	97.1616775361184	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAAGTGCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	7814077	7796362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813268_7813363_7813484_7813813
m54284U_201201_044215/172492394/ccs	chr16	+	3407	16	NIC	ENSMUSG00000118669.2	novel	4232	17	NA	NA	0	110	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	67.3057369190935	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTCTTCTGCCTTGGC	NA	False	NA	13	True	ATTAAA	-16	NA	18210480	18225116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18224356
m54284U_201201_044215/172493028/ccs	chr17	-	4375	6	ISM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	19228	0	0	0	3prime_fragment	FALSE	canonical	3	125	junction_4	7.22772439983706	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123111	47109045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849
m54284U_201201_044215/172493399/ccs	chr5	-	6632	4	NIC	ENSMUSG00000046572.11	novel	6804	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	19.258475767539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTCTCTCATTTCG	NA	False	NA	-5	True	AATAAA	-16	NA	38842100	38825828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_38832018_38839827_38840126_38840535_38840602_38842021
m54284U_201201_044215/172556298/ccs	chr10	+	2808	18	NNC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	88	junction_17	229.173164005618	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171916	21244797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243731_21244187
m54284U_201201_044215/172557549/ccs	chr15	-	2833	12	NNC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	205.142723951113	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8083	False	NA	-4	True	AATAAA	-24	NA	79326273	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79305916_79305978_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
m54284U_201201_044215/172557652/ccs	chr5	-	2867	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	54.7531215638675	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911556	114867635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
m54284U_201201_044215/172558350/ccs	chr7	+	169	1	Intergenic	novelGene_4017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATACATATAGATA	NA	False	NA	2	True	NA	NA	NA	109694681	109694850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109694700_109694800
m54284U_201201_044215/172687563/ccs	chr17	-	174	1	Intergenic	novelGene_8646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAACTCACAACGCCTCT	NA	False	NA	NA	False	AAAACA	-14	NA	53899894	53899720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_53899700_53899900
m54284U_201201_044215/172689392/ccs	chr5	+	4899	6	NNC	ENSMUSG00000029178.15	novel	298	4	NA	NA	-5439	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	263.203039496127	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	8	True	AATAAA	-16	NA	64955291	64990244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_64955374_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
m54284U_201201_044215/172689511/ccs	chr14	+	3070	17	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	94.0883062606613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	False	NA	25	True	AATAAA	-32	NA	30973459	30981901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
m54284U_201201_044215/172689923/ccs	chr5	+	1688	15	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	554	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	349.787253125353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTGTGGTAAGCTTT	NA	False	NA	22	True	GATAAA	-11	NA	31652110	31668757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31652228_31652861_31652956_31653922_31653984_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
m54284U_201201_044215/172755379/ccs	chr3	-	3377	27	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_25	119.848400294933	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069723	100045495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067237_100068335_100068539_100069659
m54284U_201201_044215/172819296/ccs	chr14	+	189	1	Intergenic	novelGene_7378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTGTCATGCATTCA	NA	False	NA	NA	False	NA	NA	NA	29765207	29765396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_29765200_29765400
m54284U_201201_044215/172820008/ccs	chr7	+	174	1	Intergenic	novelGene_3813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAGAAAATAC	NA	False	NA	NA	False	NA	NA	NA	42597902	42598076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_42597900_42598100
m54284U_201201_044215/172951485/ccs	chr5	+	177	1	Intergenic	novelGene_2684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTTTTCAAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	96394811	96394988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_96394800_96395000
m54284U_201201_044215/172951601/ccs	chr19	+	3555	10	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	0	82	combination_of_known_junctions	FALSE	canonical	3	71	junction_5	59.2792096047006	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	18	True	AATAAA	-23	NA	10502629	10525099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
m54284U_201201_044215/173015545/ccs	chr13	+	3422	27	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	577	junction_1	112.248614598533	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598194	6630078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
m54284U_201201_044215/173017349/ccs	chr17	-	207	1	Intergenic	novelGene_8784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGACATAGTGAAACATA	6071	False	NA	NA	False	NA	NA	NA	88785943	88785736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_88785700_88785900
m54284U_201201_044215/17301740/ccs	chr12	+	2220	8	NIC	ENSMUSG00000021023.15	novel	2250	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	145.251365513972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTAGTTGGTTTTGCA	NA	False	NA	19	True	AATAAA	-20	NA	55350045	55429281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_55350123_55350400_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
m54284U_201201_044215/173017481/ccs	chr17	+	471	4	NNC	ENSMUSG00000002379.8	novel	493	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_2	1198.36249385012	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAAAGGCAGGCTTG	NA	False	NA	22	True	AATAAA	-22	NA	57024797	57029141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_57024943_57028034_57028128_57028365_57028442_57028984
m54284U_201201_044215/17303870/ccs	chr4	+	2454	9	NNC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	47.4157146946031	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	-7	True	NA	NA	False	AATAAA	-26	NA	44756638	44932215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_44756697_44761849_44762481_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
m54284U_201201_044215/173080749/ccs	chr10	+	5064	20	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	235	513	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	61.1086857013309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCAGCTCCTTGGTTC	NA	False	NA	26	True	AATAAA	-43	NA	98750502	98860198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
m54284U_201201_044215/173081692/ccs	chr9	+	3428	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	174.736636017634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5879	False	NA	20	True	AATAAA	-30	NA	21336240	21418436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
m54284U_201201_044215/173081735/ccs	chr16	-	5367	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_23	11.2545726896769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTATTTTTTAAAGA	6483	False	NA	NA	False	AATAAA	-15	NA	97653050	97593531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652972
m54284U_201201_044215/173081777/ccs	chr9	+	3990	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	65.5076331430162	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553283_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
m54284U_201201_044215/173083141/ccs	chr11	+	2752	11	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	423.425329898909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207038	101214363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210419_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
m54284U_201201_044215/173147327/ccs	chr2	-	187	1	Intergenic	novelGene_1086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTAAGGTGCAGGTTAT	NA	False	NA	NA	False	NA	NA	NA	136827750	136827563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_136827600_136827800
m54284U_201201_044215/173211687/ccs	chr9	+	1764	6	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	966	junction_4	56.2800142146393	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914210	20920127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20919196_20919789
m54284U_201201_044215/173213812/ccs	chr7	-	196	1	Intergenic	novelGene_3779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCTTGGGTAGGGAAAA	NA	False	NA	NA	False	NA	NA	NA	30176825	30176629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_30176600_30176800
m54284U_201201_044215/173214320/ccs	chr1	-	1104	8	NIC	ENSMUSG00000001143.14	novel	705	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	59.6068753738756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGAGAGTTTCTACTCCC	NA	False	NA	-1	True	AATAAA	-16	NA	36484352	36458951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_36459117_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
m54284U_201201_044215/173214360/ccs	chr12	-	205	1	Intergenic	novelGene_6904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACATGTGCCCAGGCC	NA	False	NA	NA	False	TATAAA	-5	NA	111029287	111029082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111029100_111029300
m54284U_201201_044215/173277709/ccs	chr3	+	2563	14	NNC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	264.494113535017	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_157742514_157746144_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201201_044215/173279272/ccs	chr6	+	184	1	Intergenic	novelGene_3537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAATGATTTAAATAAA	NA	False	NA	NA	False	GATAAA	-41	NA	128816012	128816196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_128816000_128816200
m54284U_201201_044215/173280000/ccs	chr2	-	1853	9	NNC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	223.608474794673	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	NA	False	NA	-14	True	AATAAA	-14	NA	34760974	34742113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753548_34755538_34755668_34755993_34756108_34760761
m54284U_201201_044215/173343442/ccs	chr10	+	2618	7	NNC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	485.136750480384	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516108	61529076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_61516218_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
m54284U_201201_044215/173345238/ccs	chr4	+	2716	22	NNC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	15	junction_11	90.5601114555855	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007714	116017041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012262_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
m54284U_201201_044215/173409336/ccs	chr11	-	1893	14	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	297.943861119336	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806876_96807023_96807209
m54284U_201201_044215/173409784/ccs	chr4	+	2718	3	NIC	ENSMUSG00000066009.9	novel	2798	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_2	50	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTTGGTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	146033867	146063191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_146034017_146054375_146054480_146060726
m54284U_201201_044215/173475369/ccs	chr16	+	3244	9	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1315	junction_4	290.242463295776	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
m54284U_201201_044215/173539391/ccs	chr5	-	200	1	Intergenic	novelGene_2862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAACAAACAAACAA	4721	False	NA	NA	False	NA	NA	NA	121890625	121890425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121890400_121890600
m54284U_201201_044215/173540743/ccs	chr17	-	958	3	NIC	ENSMUSG00000040888.11	novel	1177	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCTGGTTTCTGTGTGCT	NA	False	NA	-10	True	AATAAA	-14	NA	24915064	24912163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24912587_24913141_24913417_24914804
m54284U_201201_044215/173541598/ccs	chr17	-	2844	15	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_5	143.565547143215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201201_044215/173605167/ccs	chr4	-	198	1	Intergenic	novelGene_2398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	150358457	150358259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_150358300_150358500
m54284U_201201_044215/173605986/ccs	chr2	-	6105	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	0	-2600	combination_of_known_splicesites	FALSE	canonical	2	6	junction_46	67.4057663304377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529311	128454623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128529072
m54284U_201201_044215/173670933/ccs	chr19	+	3700	1	Intergenic	novelGene_9155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3458	False	NA	NA	False	NA	NA	NA	9864785	9868485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_9864800_9868500
m54284U_201201_044215/173672317/ccs	chr8	-	3008	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	86.0488161471765	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175316	73094842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73095369_73099809_73100016_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
m54284U_201201_044215/17368349/ccs	chr14	+	1426	10	NNC	ENSMUSG00000000959.8	novel	2538	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	170.425466131599	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTTGTCTGGG	NA	False	NA	21	True	ATTAAA	-44	NA	54598297	54606094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_54598375_54598778_54598926_54600738_54600877_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
m54284U_201201_044215/17368474/ccs	chr11	-	1125	6	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	399.354178643469	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716693	117706351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_117706966_117707272_117707393_117712922_117713017_117715496_117715608_117716426_117716459_117716539
m54284U_201201_044215/17369235/ccs	chr17	+	3177	19	NIC	ENSMUSG00000024422.15	novel	3351	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_18	345.14100267629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTATGTCATTGCTT	NA	False	NA	52	True	AATGAA	-42	NA	36190710	36203562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36203310
m54284U_201201_044215/17369884/ccs	chr17	-	2091	9	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	585	junction_1	56.6192050014834	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343576	56323749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
m54284U_201201_044215/173736924/ccs	chr12	+	1861	10	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	145.012983667321	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201201_044215/173737462/ccs	chr9	-	155	1	Intergenic	novelGene_4883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7078	False	NA	NA	False	NA	NA	NA	65505634	65505479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65505500_65505600
m54284U_201201_044215/173801624/ccs	chr2	-	206	1	Intergenic	novelGene_837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTACATTTAATTCCGG	NA	False	NA	NA	False	NA	NA	NA	69752152	69751946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_69751900_69752200
m54284U_201201_044215/173804059/ccs	chr1	-	188	1	Intergenic	novelGene_561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGACGGTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	193075312	193075124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_193075100_193075300
m54284U_201201_044215/173867419/ccs	chr5	-	176	1	Intergenic	novelGene_2557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAGAAAAGAA	3259	False	NA	NA	False	NA	NA	NA	35736781	35736605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_35736600_35736800
m54284U_201201_044215/173867732/ccs	chr4	+	2801	21	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	321	junction_9	37.3583658636188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007714	116017041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
m54284U_201201_044215/173868353/ccs	chr11	-	180	1	Intergenic	novelGene_6302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAATTCTCAGCTC	2572	False	NA	NA	False	NA	NA	NA	98382232	98382052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_98382100_98382200
m54284U_201201_044215/173868849/ccs	chr8	+	4399	34	NIC	ENSMUSG00000004565.16	novel	4444	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	64.3462568557788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3565410	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_3565557_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
m54284U_201201_044215/173869541/ccs	chr7	-	2963	8	NIC	ENSMUSG00000030583.17	novel	4321	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	17.8004815344176	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTTCTCCTGCAGC	1021	False	NA	-1	True	AATAAA	-17	NA	29041293	29019796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29041243
m54284U_201201_044215/173934733/ccs	chr1	+	156	1	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAGAGGAGAAGCTTA	NA	False	NA	NA	False	NA	NA	NA	16373826	16373982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_16373800_16374000
m54284U_201201_044215/173998385/ccs	chr5	+	2336	15	NIC	ENSMUSG00000037313.17	novel	2187	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	252.930175086698	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTCGCCAAGATATATCA	NA	False	NA	NA	False	AATAAA	-23	NA	33815929	33836329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33835963
m54284U_201201_044215/174000481/ccs	chr14	+	3434	26	NNC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	105.930165675316	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640153	56726892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_56640210_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
m54284U_201201_044215/174065697/ccs	chr6	+	224	1	Intergenic	novelGene_3379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAATTGTTGCTGAG	3316	False	NA	NA	False	NA	NA	NA	88051396	88051620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_88051400_88051600
m54284U_201201_044215/174129374/ccs	chr14	+	112	1	Intergenic	novelGene_7541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAATACATTTCCTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	76040529	76040641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_76040500_76040600
m54284U_201201_044215/174129648/ccs	chr10	-	5609	14	NIC	ENSMUSG00000020114.13	novel	7766	15	NA	NA	0	-3390	intron_retention	FALSE	canonical	3	515	junction_9	94.0553154631034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCATGGATTTCTTGGTT	226	False	NA	-29	True	ATTAAA	-15	NA	119075960	119038549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119053970_119055494_119055650_119063307_119063452_119075545
m54284U_201201_044215/174194890/ccs	chr3	+	2241	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	406	junction_9	33.6675834125276	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4481	False	NA	45	True	AATAAA	-31	NA	95222557	95230910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
m54284U_201201_044215/174195337/ccs	chr11	+	557	4	ISM	ENSMUSG00000061086.13	ENSMUST00000123074.8	677	6	3985	-6	-654	0	3prime_fragment	FALSE	canonical	3	41	junction_3	1.69967317119759	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCCGTTGATTTGTTTT	NA	False	NA	12	True	AATAAA	-26	NA	104475135	104478041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_104475439_104475762_104475841_104476552_104476598_104477910
m54284U_201201_044215/174195860/ccs	chr6	-	176	1	Intergenic	novelGene_3432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	115824073	115823897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_115823900_115824100
m54284U_201201_044215/174326072/ccs	chr8	-	1872	11	NIC	ENSMUSG00000003809.15	novel	2114	12	NA	NA	128	-195	intron_retention	FALSE	canonical	3	204	junction_10	28.6323243904507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAGGACTGGACTAGG	NA	False	NA	-14	True	AATAAA	-14	NA	85620418	85613216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
m54284U_201201_044215/174326666/ccs	chr12	+	3335	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	86.5031398844952	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622416	3831398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3824611_3829618_3829655_3831105
m54284U_201201_044215/174327214/ccs	chr10	-	2807	7	NIC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	1248	junction_6	1076.15746472758	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959819	90952652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90959569_90959777
m54284U_201201_044215/174328214/ccs	chr8	+	1789	7	NIC	ENSMUSG00000031770.17	novel	1952	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	185.799174738031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCAAGCTTGCTGTGTCT	NA	False	NA	47	True	AATAAA	-40	NA	95113122	95122005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95121218
m54284U_201201_044215/17433399/ccs	chr12	-	185	1	Intergenic	novelGene_6669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATACATAAGGAAAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	60539195	60539010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_60539000_60539200
m54284U_201201_044215/174393419/ccs	chr11	+	1840	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	65.8649185834159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	18	True	AATAAA	-19	NA	5049432	5056093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_5049567_5049747_5049899_5050384_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
m54284U_201201_044215/174458636/ccs	chr1	-	205	1	Intergenic	novelGene_383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCCTCTCAATGGGCC	NA	False	NA	NA	False	NA	NA	NA	153365465	153365260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153365300_153365500
m54284U_201201_044215/174459217/ccs	chr6	+	1896	2	Antisense	novelGene_ENSMUSG00000055799.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTAGCAGCCTGGGCAG	NA	False	NA	NA	False	NA	NA	NA	72710896	72712836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_+_72711169_72711212
m54284U_201201_044215/174523001/ccs	chr8	+	181	1	Intergenic	novelGene_4377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGAAAGAAATAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	85653441	85653622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_85653400_85653600
m54284U_201201_044215/174524855/ccs	chr8	+	2243	18	NNC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	0	-1100	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	258.880635411387	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1906	False	NA	26	True	AATAAA	-27	NA	106937654	106978326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967859_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
m54284U_201201_044215/174525018/ccs	chr5	-	172	1	Intergenic	novelGene_2730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGATGCAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	107501414	107501242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_107501200_107501400
m54284U_201201_044215/174588380/ccs	chrX	-	3630	7	NIC	ENSMUSG00000046873.19	novel	3891	6	NA	NA	0	-172	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	90.1432501940969	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATAGCTTGCTTGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	156381675	156349114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_156351813_156351929_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
m54284U_201201_044215/174589628/ccs	chr2	-	185	1	Intergenic	novelGene_1172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATCGGGCACCAAAATG	5250	False	NA	NA	False	NA	NA	NA	155974205	155974020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_155974000_155974200
m54284U_201201_044215/174590431/ccs	chr8	+	175	1	Intergenic	novelGene_4270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTTTTAAAAAAGAAAAA	9680	False	NA	NA	False	NA	NA	NA	35630476	35630651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_35630500_35630700
m54284U_201201_044215/174590566/ccs	chr5	-	731	5	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	2203	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	96.5012953280939	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCATGTTCAAGCCAGA	NA	False	NA	-13	True	AATAAA	-21	NA	36968104	36964264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36968011
m54284U_201201_044215/174590765/ccs	chr1	+	1953	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	167	junction_4	34.5913283931103	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187513	75190886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75190342_75190457
m54284U_201201_044215/174654320/ccs	chr15	-	6601	10	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	64	0	intron_retention	FALSE	canonical	3	332	junction_9	83.0975924834361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8083	False	NA	-4	True	AATAAA	-24	NA	79326273	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
m54284U_201201_044215/174654586/ccs	chr11	+	3516	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	72	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	88.4704894300919	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072424	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
m54284U_201201_044215/174720249/ccs	chr8	-	6506	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	49.3409312842796	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296547	126144812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126246584_126246646_126296393
m54284U_201201_044215/174720804/ccs	chr4	-	201	1	Intergenic	novelGene_1807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATGGAAAAAAAAGGAAT	7447	False	NA	NA	False	NA	NA	NA	40232358	40232157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_40232200_40232400
m54284U_201201_044215/174721124/ccs	chr19	-	1305	6	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_5	111.662706397436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9773	False	NA	NA	False	AGTAAA	-14	NA	60215129	60187330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60214741
m54284U_201201_044215/174721181/ccs	chr11	+	612	3	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	0	-38782	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTAATTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	32483304	32509746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_32483560_32505123_32505289_32509554
m54284U_201201_044215/174721366/ccs	chr1	-	1423	1	NIC	ENSMUSG00000073643.12	novel	4551	12	NA	NA	0	-26463	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCCAGTGACTTCATTT	NA	False	NA	NA	False	NA	NA	NA	79739455	79738032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_79738000_79739500
m54284U_201201_044215/174784822/ccs	chr13	+	176	1	Intergenic	novelGene_7110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCCAGGGGCCTAGTT	NA	False	NA	NA	False	NA	NA	NA	55838682	55838858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55838700_55838900
m54284U_201201_044215/174786063/ccs	chr17	-	2428	14	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	679.063896218853	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5740	False	NA	-5	True	AATAAA	-16	NA	33904393	33865209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
m54284U_201201_044215/174916813/ccs	chr19	-	2479	7	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	822	junction_6	56.9524655597397	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	False	NA	-33	True	TATAAA	-22	NA	41921737	41912004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41916553_41919794_41919870_41921487_41921604_41921690
m54284U_201201_044215/174917403/ccs	chr1	-	192	1	Intergenic	novelGene_391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTAAAAAGAACAATGCC	6095	False	NA	NA	False	NA	NA	NA	153539295	153539103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153539100_153539300
m54284U_201201_044215/174981161/ccs	chrX	+	3553	12	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	159	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	202.540354105848	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158309842	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
m54284U_201201_044215/174981249/ccs	chr1	+	1996	11	NNC	ENSMUSG00000025925.15	novel	2268	10	NA	NA	-2418	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	308.297275369083	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCACCTAGCATTGA	NA	False	NA	51	True	TATAAA	-11	NA	15873451	15913694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_15873599_15875706_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
m54284U_201201_044215/174981385/ccs	chr17	+	609	3	NIC	ENSMUSG00000057863.7	novel	383	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	5436	junction_1	2267	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGTGTATGTGTGA	NA	False	NA	-1	True	AATAAA	-12	NA	56920415	56921243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56920449_56920585_56921042_56921123
m54284U_201201_044215/174981835/ccs	chr11	+	3420	12	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_2	39.5929704087117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51153976	51172593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
m54284U_201201_044215/17498185/ccs	chr14	-	1181	1	Antisense	novelGene_ENSMUSG00000053205.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGCTTACTCTATCAT	1285	False	NA	NA	False	NA	NA	NA	45597373	45596192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_-_45596200_45597400
m54284U_201201_044215/174982003/ccs	chr12	-	1377	3	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	0	-1397	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	74	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCAGTTTTTCTTAA	NA	False	NA	-1	True	AATAAA	-16	NA	52053284	52045686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_52046657_52051661_52051732_52052947
m54284U_201201_044215/17498242/ccs	chr5	+	1078	7	NNC	ENSMUSG00000029430.14	novel	2377	7	NA	NA	0	-1161	at_least_one_novel_splicesite	FALSE	canonical	3	335	junction_4	5449.54944365944	5848	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGTGAATCATCCCT	475	False	NA	NA	False	AATAAA	-19	NA	129097265	129100226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099071_129099255_129099438_129099610_129099837
m54284U_201201_044215/17499987/ccs	chr7	+	2819	10	NNC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	649.005468979601	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515292	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_16516401_16516480_16516564_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
m54284U_201201_044215/175047466/ccs	chr2	-	1963	5	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	0	2054	intron_retention	FALSE	canonical	2	7	junction_4	16.3458710382775	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	8899	False	NA	NA	False	NA	NA	NA	26012830	25949021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_26012700
m54284U_201201_044215/175048474/ccs	chr14	+	1493	8	NIC	ENSMUSG00000022033.10	novel	451	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	250.309767272148	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCATTATCTGTTTTT	NA	False	NA	25	True	AATAAA	-41	NA	66043680	66055271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_66043752_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
m54284U_201201_044215/175112827/ccs	chr15	-	2221	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	41	junction_3	442.932963325151	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAGTGTAAAGTGATCT	NA	False	NA	-22	True	ATTAAA	-13	NA	98432145	98416701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98432121
m54284U_201201_044215/175113017/ccs	chr11	-	2250	9	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	822	junction_5	43.8947605073772	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381174	116361670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
m54284U_201201_044215/175113812/ccs	chr1	+	3944	15	NIC	ENSMUSG00000026483.14	novel	4010	15	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	53.6363416244727	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTTTACCAATGTAGA	NA	False	NA	12	True	NA	NA	NA	151446936	151595093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151447017_151447193_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
m54284U_201201_044215/175115077/ccs	chr8	-	4795	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	intron_retention	FALSE	canonical	3	77	junction_15	202.704924459175	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111537714_111538022_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
m54284U_201201_044215/175177786/ccs	chr10	+	3085	16	NNC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	0	147	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_13	72.0359786649853	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTTTAATTTTCCTG	9504	False	NA	10	True	AATAAA	-19	NA	94524515	94626202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625606
m54284U_201201_044215/175177940/ccs	chr7	+	156	1	Intergenic	novelGene_3836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAATAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	45053542	45053698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_45053500_45053700
m54284U_201201_044215/175179124/ccs	chr5	+	2559	13	NNC	ENSMUSG00000032754.15	novel	2898	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	68.4403633343171	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGAGTCCCACAGGGT	-4	True	NA	6	True	AATAAA	-22	NA	120649232	120672089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659038_120659201_120659818_120659927_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
m54284U_201201_044215/175179201/ccs	chr2	+	2498	14	NNC	ENSMUSG00000033068.17	novel	2540	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	38.7806759662898	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTGCCTCATTAGTG	NA	False	NA	12	True	AATAAA	-17	NA	150591000	150613595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_150591154_150594932_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
m54284U_201201_044215/175180095/ccs	chr9	-	1917	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	5163	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	76.0180899523265	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27032683	27008679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011404_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27032579
m54284U_201201_044215/175180343/ccs	chr7	-	1548	10	NIC	ENSMUSG00000030541.17	novel	1745	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	604.630241052382	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGATGTGTTTGTCC	NA	False	NA	-5	True	AAAAAG	-13	NA	79765080	79744593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
m54284U_201201_044215/175243829/ccs	chr15	+	3337	26	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_22	42.0526527106198	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192967	99214899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
m54284U_201201_044215/175244575/ccs	chr6	+	2208	4	NNC	ENSMUSG00000012396.13	novel	2211	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	354	junction_3	1978.73567938947	269	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTTATCTTTTGTCCA	NA	False	NA	18	True	AATAAA	-19	NA	122684526	122691592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_122684893_122688496_122688763_122689587_122689675_122690103
m54284U_201201_044215/175310502/ccs	chr14	+	201	1	Intergenic	novelGene_7391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTGTGTTCGAGTAGC	NA	False	NA	NA	False	NA	NA	NA	34068779	34068980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_34068800_34069000
m54284U_201201_044215/175375118/ccs	chr4	+	3203	8	NIC	ENSMUSG00000028560.12	novel	3577	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	214	junction_1	120.154492387161	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATTTTTTTTTTTAA	NA	False	NA	18	True	AATAAA	-24	NA	98812200	98823780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_98812481_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
m54284U_201201_044215/175375424/ccs	chr19	+	180	1	Antisense	novelGene_ENSMUSG00000100417.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAGGTGATACACAGGTA	NA	False	NA	NA	False	NA	NA	NA	45322323	45322503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_+_45322300_45322500
m54284U_201201_044215/175376460/ccs	chr15	+	2675	10	NIC	ENSMUSG00000022434.9	novel	2518	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	65.1689163199833	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTTTTTC	NA	False	NA	8	True	AATAAA	-15	NA	84921325	84947031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_84921446_84922972_84923166_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
m54284U_201201_044215/175377192/ccs	chr17	+	1451	4	NIC	ENSMUSG00000034165.17	novel	336	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_1	1894.33911078948	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47908088	47910614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47908162_47908344_47908505_47908927_47909065_47909533
m54284U_201201_044215/175440917/ccs	chr1	-	2213	14	NIC	ENSMUSG00000026014.16	novel	2241	16	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	4.5573271518765	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTTAAAGCTTGTTG	NA	False	NA	-5	True	TTTAAA	-4	NA	60606001	60522343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_60522500_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445_60572566_60605723
m54284U_201201_044215/175442558/ccs	chr4	-	1030	8	NIC	ENSMUSG00000028898.16	novel	1130	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	168.067042016705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	2316	False	NA	-2	True	AATAAA	-15	NA	132056849	132039075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132056663
m54284U_201201_044215/175506655/ccs	chr8	+	2884	16	NIC	ENSMUSG00000031889.10	novel	2916	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	66.0092922751537	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGCTGTTGATTTCCTT	NA	False	NA	NA	False	ACTAAA	-2	NA	105951898	105979685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105975960_105976095_105976228_105976288_105977350_105977424_105978229
m54284U_201201_044215/175506706/ccs	chr2	-	3134	9	NNC	ENSMUSG00000048327.7	novel	3137	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	74	junction_2	84.1037305950218	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTGTTGTTCTCTT	NA	False	NA	0	True	AATAAA	-20	NA	129139132	129110129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_129111184_129112494_129112679_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
m54284U_201201_044215/175507711/ccs	chr4	+	961	6	NIC	ENSMUSG00000028691.13	novel	2294	6	NA	NA	0	243	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	9256.99122609501	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGATTCATTCTTTAA	NA	False	NA	31	True	ATTAAA	-16	NA	116542795	116556712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_116542858_116544574_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
m54284U_201201_044215/175508063/ccs	chr14	+	7579	29	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	44.8630569349774	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8247	False	NA	14	True	AATAAA	-21	NA	30741126	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
m54284U_201201_044215/175573387/ccs	chr8	-	1873	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	157	junction_3	25.3106321369806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578640	106571304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106576154_106576257_106576346_106576464_106576556_106578502
m54284U_201201_044215/17565020/ccs	chr10	-	1113	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_2	1545.053215912	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGTGTGTATTTCATT	NA	False	NA	-9	True	AATAAA	-16	NA	95337802	95316667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95316840_95326107_95326725_95329492_95329578_95332685_95332750_95336244_95336385_95337767
m54284U_201201_044215/17565666/ccs	chr4	-	186	1	Intergenic	novelGene_2422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGAAGGCCTACCAGG	4083	False	NA	NA	False	NA	NA	NA	155341664	155341478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155341500_155341700
m54284U_201201_044215/17565803/ccs	chr19	-	1599	7	ISM	ENSMUSG00000039330.6	ENSMUST00000235569.2	1726	8	1299	0	1299	0	3prime_fragment	TRUE	canonical	3	8	junction_6	13.7234592334926	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTGTGAGACTTCT	6283	False	NA	NA	False	ATTAAA	-13	NA	5451255	5440076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_-_5440226_5440636_5440756_5440941_5441042_5444310_5444482_5449940_5450089_5450261_5450966_5451047
m54284U_201201_044215/17566058/ccs	chr9	+	3960	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-50	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	33.0834597060593	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAATGTGTTTGTCATTT	4669	False	NA	19	True	AATAAA	-13	NA	69305204	69340354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_69305336_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
m54284U_201201_044215/17566362/ccs	chr7	-	4115	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	5035	junction_8	483.320108727125	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201201_044215/175703019/ccs	chr11	-	1492	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	888.749239099534	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAACCTTGTTCACTT	9585	False	NA	-6	True	AATAAA	-17	NA	5828212	5822187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823501_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
m54284U_201201_044215/175703535/ccs	chr11	+	190	1	Intergenic	novelGene_6458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	115556697	115556887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115556700_115556900
m54284U_201201_044215/175703586/ccs	chr11	+	1657	5	NNC	ENSMUSG00000020328.11	novel	1577	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	556.884806310964	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTACTTTTTCTTTTCT	NA	False	NA	29	True	AATAAA	-21	NA	40624493	40630873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_40624982_40626633_40626714_40626844_40626894_40627319_40627472_40629985
m54284U_201201_044215/175703806/ccs	chr10	+	221	1	Intergenic	novelGene_5484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGAGAATATTGCAATCA	NA	False	NA	NA	False	AAGAAA	-31	NA	84993603	84993824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_84993600_84993800
m54284U_201201_044215/175767947/ccs	chr8	-	3225	8	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	57542	0	241	0	3prime_fragment	FALSE	canonical	3	101	junction_4	7.79848232226067	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTGGCCCTCTGTGAT	NA	False	NA	-8	True	AATAAA	-17	NA	61986634	61964466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387
m54284U_201201_044215/175768287/ccs	chr5	+	2501	13	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	554	intron_retention	FALSE	canonical	3	859	junction_6	71.0756150557669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTGTGGTAAGCTTT	NA	False	NA	22	True	GATAAA	-11	NA	31652096	31668757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
m54284U_201201_044215/175768980/ccs	chr6	+	6084	8	NIC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	35.8466119994168	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691911	56738897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_56692200_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
m54284U_201201_044215/175770371/ccs	chr1	-	2618	14	NIC	ENSMUSG00000022995.17	novel	4231	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_9	101.725526984315	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCCAGAGGGCGCTG	5643	False	NA	-20	True	AATAAA	-21	NA	181847545	181733070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749526_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
m54284U_201201_044215/175835444/ccs	chr11	+	718	3	NNC	ENSMUSG00000078695.9	novel	737	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_1	514.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2452	False	NA	-1	True	AATAAA	-21	NA	97576778	97579447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97577042_97577345_97577447_97579093
m54284U_201201_044215/175835695/ccs	chr3	+	3262	13	ISM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	34	97	0	0	intron_retention	FALSE	canonical	3	105	junction_1	23.8449854966056	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGGAAGGGATGTTGT	3321	False	NA	16	True	AATAAA	-26	NA	96604432	96613289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664
m54284U_201201_044215/175835964/ccs	chr2	-	172	1	Intergenic	novelGene_606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	18126701	18126529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_18126500_18126700
m54284U_201201_044215/175899470/ccs	chr7	+	955	7	NIC	ENSMUSG00000030588.13	novel	1111	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	620.032638029824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6061	False	NA	12	True	AATAAA	-15	NA	28937777	28946954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
m54284U_201201_044215/175899649/ccs	chr7	+	1196	6	NIC	ENSMUSG00000039745.9	novel	1418	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	90.6598036618214	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAATGGAGAAA	9894	False	NA	-5	True	NA	NA	NA	49408876	49423723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_49408894_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
m54284U_201201_044215/175900980/ccs	chr16	+	3743	19	NNC	ENSMUSG00000022682.9	novel	3582	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	334.543160957162	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	False	NA	27	True	AATAAA	-20	NA	13598576	13632703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_13598704_13599856_13599963_13601193_13601355_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
m54284U_201201_044215/175901111/ccs	chr12	+	1805	13	NNC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	294.09648596261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	False	NA	NA	False	ATTAAA	-42	NA	105976541	106041479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_105976969_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
m54284U_201201_044215/175964593/ccs	chr5	+	3541	17	NIC	ENSMUSG00000029482.5	novel	3239	18	NA	NA	61	0	intron_retention	FALSE	canonical	3	83	junction_4	15.189943219117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTACGCGTGTGTTTCTC	NA	False	NA	10	True	AATAAA	-27	NA	125552938	125594474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
m54284U_201201_044215/175965696/ccs	chrX	+	3814	12	NIC	ENSMUSG00000019558.15	novel	3964	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_4	118.785590577837	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTCCTGTTTCTGCTTC	NA	False	NA	30	True	AATAAA	-20	NA	72716755	72726108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
m54284U_201201_044215/175965825/ccs	chr9	-	256	1	Intergenic	novelGene_5157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCTAAACCTACGAGT	NA	False	NA	NA	False	NA	NA	NA	121547298	121547042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_121547000_121547300
m54284U_201201_044215/175966048/ccs	chr3	-	4895	6	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_2	145.648343622576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6850	False	NA	-9	True	AATAAA	-18	NA	108819043	108810122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_108812079_108812426_108812651_108813233_108815164_108815247_108815400_108815651_108815721_108818479
m54284U_201201_044215/176030620/ccs	chr12	+	5075	17	NIC	ENSMUSG00000054309.10	novel	2499	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	699	junction_9	65.3546813548961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGCCTGTTTACTTT	NA	False	NA	13	True	AATAAA	-17	NA	21336358	21364836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
m54284U_201201_044215/176031989/ccs	chr16	+	2542	13	NIC	ENSMUSG00000035506.17	novel	2656	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_5	14.3611648397877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTATTTTTTATTATT	NA	False	NA	9	True	AATAAA	-19	NA	33337697	33483778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_33337866_33338649_33338747_33355233_33355381_33361221_33361414_33371252_33371485_33426535_33426624_33428514_33428603_33437477_33437625_33444923_33445546_33466932_33467031_33470187_33470306_33478566_33478628_33483294
m54284U_201201_044215/176095396/ccs	chr1	-	2427	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	297	junction_10	47.5590976427754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTCATGTTTGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	171115564	171109522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171109877_171110070_171110186_171110268_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
m54284U_201201_044215/176095701/ccs	chr10	+	4738	30	NNC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	0	83	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_13	36.8965194972466	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCATCCACATTTCAT	NA	False	NA	41	True	AATAAA	-29	NA	27950849	28472045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
m54284U_201201_044215/176095901/ccs	chr8	-	177	1	Intergenic	novelGene_4314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAGAAGAGA	7902	False	NA	NA	False	NA	NA	NA	70131328	70131151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_70131200_70131300
m54284U_201201_044215/176096060/ccs	chr9	-	210	1	Intergenic	novelGene_4937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGAAAGAAAGGTTGGT	4120	False	NA	NA	False	NA	NA	NA	72686925	72686715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72686700_72686900
m54284U_201201_044215/176097553/ccs	chr8	+	2708	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	0	-1100	intron_retention	FALSE	canonical	3	978	junction_12	71.072036519295	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1906	False	NA	26	True	AATAAA	-27	NA	106937654	106978326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
m54284U_201201_044215/176163671/ccs	chr4	+	687	5	NIC	ENSMUSG00000028837.9	novel	859	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	136	junction_1	1450.30695026949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGGGTTTGGCCTTA	5429	False	NA	19	True	AATAAA	-21	NA	126571471	126603507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126571639_126580821_126580893_126599850_126600014_126601346_126601397_126603271
m54284U_201201_044215/176226396/ccs	chr8	-	3535	21	NIC	ENSMUSG00000031788.15	novel	3384	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_17	16.2668374307977	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGTGCAATCTGAATC	NA	False	NA	-10	True	ATTAAA	-15	NA	95869145	95826461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95827081_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95853153_95853336_95855823_95855963_95861344_95861488_95864542_95864748_95869059
m54284U_201201_044215/176292328/ccs	chr11	-	2352	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	399	junction_8	1263.94068777859	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	False	NA	-13	True	AATAAA	-23	NA	5049096	5019688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032283_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
m54284U_201201_044215/176293701/ccs	chr10	-	179	1	Intergenic	novelGene_5427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGAGCCAGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	77457298	77457119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_77457100_77457300
m54284U_201201_044215/17629499/ccs	chr4	+	1283	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	61.9861735735133	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569696	149581125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_149569731_149570318_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
m54284U_201201_044215/17630090/ccs	chr12	+	182	1	Intergenic	novelGene_6828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATTATTTTATATA	NA	False	NA	NA	False	NA	NA	NA	87327157	87327339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_87327200_87327300
m54284U_201201_044215/17630091/ccs	chr4	+	1032	7	NIC	ENSMUSG00000012123.18	novel	2714	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	39.282806530197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133809622	133819812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_133809759_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
m54284U_201201_044215/17630638/ccs	chr3	+	167	1	Intergenic	novelGene_1610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGGAGGAGATGGAAA	NA	False	NA	NA	False	NA	NA	NA	103699537	103699704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_103699500_103699700
m54284U_201201_044215/17630803/ccs	chr12	-	829	6	NIC	ENSMUSG00000020949.10	novel	981	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	4034.85064903275	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGACTTATTTATTGT	NA	False	NA	-14	True	AATAAA	-17	NA	65120736	65109209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_65109515_65110451_65110550_65112510_65112579_65115775_65115884_65116724_65116827_65120588
m54284U_201201_044215/17631988/ccs	chr6	+	6261	16	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	119.724387193624	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGTGTGTTTCGGAGT	NA	False	NA	31	True	AATAAA	-25	NA	91661075	91736047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_91661290_91675969_91676014_91688492_91688610_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
m54284U_201201_044215/176357906/ccs	chr13	+	5020	13	NIC	ENSMUSG00000021457.15	novel	5363	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	14.4575528127458	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTGTGATGACCTTTAC	NA	False	NA	NA	False	AATAAA	-12	NA	52737472	52802818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
m54284U_201201_044215/176358020/ccs	chr8	+	2577	13	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	371.107314518171	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201201_044215/176358933/ccs	chr17	+	223	1	Intergenic	novelGene_8506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAACCAACTTCTCAAG	NA	False	NA	NA	False	NA	NA	NA	31233300	31233523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_31233300_31233500
m54284U_201201_044215/176358984/ccs	chr3	+	2243	8	NIC	ENSMUSG00000027777.16	novel	1298	6	NA	NA	-134	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	160.899004956272	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTCCTTTTGCTCACTA	NA	False	NA	21	True	AATAAA	-23	NA	68400689	68533796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_68400939_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
m54284U_201201_044215/176359003/ccs	chr5	+	208	1	Intergenic	novelGene_2721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	106012711	106012919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_106012700_106012900
m54284U_201201_044215/176359256/ccs	chr9	+	1398	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-147	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	6148.49757217661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082858_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
m54284U_201201_044215/176423116/ccs	chr11	+	2047	10	NIC	ENSMUSG00000020781.15	novel	1979	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	156	junction_1	27.0203398467173	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGTTCAATACTTAC	5954	False	NA	NA	False	ATTAAA	-16	NA	115705571	115713915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115705646_115705740_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
m54284U_201201_044215/176423700/ccs	chr12	-	98	1	Intergenic	novelGene_6633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAACCCAGAAAGACAAATA	NA	False	NA	NA	False	NA	NA	NA	52537840	52537742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_52537700_52537800
m54284U_201201_044215/176424774/ccs	chr15	-	2369	3	NIC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	0	242	intron_retention	FALSE	canonical	3	79	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGATCGATCATCAGTCAT	NA	False	NA	-4	True	AATAAA	-26	NA	82097016	82091152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_82091749_82091951_82092798_82096089
m54284U_201201_044215/176424812/ccs	chr17	-	1212	5	NIC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	72	0	intron_retention	FALSE	canonical	3	1022	junction_4	36.6427005009183	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCCAGTCTCTCCC	896	False	NA	-23	True	NA	NA	NA	34822563	34820064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34820641_34820714_34820963_34821058_34821172_34821264_34821284_34822307
m54284U_201201_044215/176488951/ccs	chrX	+	2944	10	NIC	ENSMUSG00000000134.18	novel	6328	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	90.0647229551485	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628798	7641440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7628870_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
m54284U_201201_044215/176554998/ccs	chr5	-	197	1	Intergenic	novelGene_2613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGCAGATCAGAACCAA	NA	False	NA	NA	False	NA	NA	NA	73078337	73078140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_73078100_73078300
m54284U_201201_044215/176555709/ccs	chr11	+	1713	14	NIC	ENSMUSG00000060216.16	novel	1777	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	69.6723523816336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTGTATGTGTTCTG	NA	False	NA	14	True	AATAAA	-14	NA	70323462	70331500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70323580_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
m54284U_201201_044215/176620142/ccs	chr8	-	190	1	Intergenic	novelGene_4470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCCTCACTAATCCCCA	NA	False	NA	NA	False	NA	NA	NA	107881176	107880986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107881000_107881200
m54284U_201201_044215/176620709/ccs	chr13	+	4233	5	NIC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_1	311.259939600328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51254915	51306582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_51255027_51281960_51282010_51293392_51293647_51298337_51298572_51302997
m54284U_201201_044215/176686033/ccs	chr7	-	1970	7	NNC	ENSMUSG00000062300.15	novel	1955	6	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	429.864578158698	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGGGTGTTTTGTAATC	NA	False	NA	-4	True	AATAAA	-16	NA	19483401	19458085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_19458795_19463364_19463437_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
m54284U_201201_044215/176751308/ccs	chr9	+	7273	15	NIC	ENSMUSG00000032384.17	novel	7208	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	5.25327885948483	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTGTTTCATTAGCTG	NA	False	NA	27	True	AATAAA	-28	NA	65816267	65952297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_65816451_65828285_65828351_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
m54284U_201201_044215/176752654/ccs	chr9	-	176	1	Intergenic	novelGene_4815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCAAGGGAAATA	351	False	NA	NA	False	NA	NA	NA	58249395	58249219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58249200_58249400
m54284U_201201_044215/176816258/ccs	chr17	+	2067	11	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	55.0784894491488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	359	False	NA	17	True	AATAAA	-19	NA	28532545	28545546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28542544_28542640_28545125
m54284U_201201_044215/176818450/ccs	chr4	+	5256	6	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	0	-805	intron_retention	FALSE	canonical	3	2693	junction_2	134.268983760212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAGCTCTGACTTTGC	22	False	NA	1	True	AATAAA	-7	NA	40722558	40733095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_40722634_40723702_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
m54284U_201201_044215/176819015/ccs	chr6	-	763	5	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	124	junction_1	505.520709269165	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	False	NA	-14	True	TATAAA	-19	NA	124689020	124681343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124681622_124682120_124682180_124682477_124682620_124682703_124682806_124688838
m54284U_201201_044215/176881965/ccs	chr4	-	1746	5	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	306	junction_2	36.0416425818802	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCATGTCCTGTTCCT	7076	False	NA	NA	False	AATAAA	-15	NA	126215496	126209844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126210659_126211095_126211197_126211512_126211985_126212191_126212289_126215234
m54284U_201201_044215/176883215/ccs	chr1	+	1615	6	NIC	ENSMUSG00000013973.13	novel	849	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	78.1756995491566	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	1657	False	NA	18	True	NA	NA	NA	171157177	171169250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
m54284U_201201_044215/176884133/ccs	chr4	+	5049	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	160.016221476868	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/176947510/ccs	chr12	+	1824	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	164.408361633464	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109510830_109510925_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201201_044215/17694933/ccs	chr15	+	3170	26	NNC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_25	36.3090291800814	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99193121	99214899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214345
m54284U_201201_044215/17695740/ccs	chr4	-	5524	19	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	31.5264439267525	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5309	False	NA	NA	False	AATAAA	-21	NA	131802632	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
m54284U_201201_044215/177012864/ccs	chr6	+	1080	8	NNC	ENSMUSG00000040112.10	novel	4162	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	237.425391073766	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTATTGTCTTACGTCA	NA	False	NA	12	True	TATAAA	-14	NA	146944261	146972397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_146944409_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
m54284U_201201_044215/177014177/ccs	chr6	-	3595	10	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	8136	junction_3	307.213803380731	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1567	False	NA	-9	True	AATAAA	-17	NA	7693254	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
m54284U_201201_044215/177078722/ccs	chr10	+	2874	10	NIC	ENSMUSG00000019891.16	novel	2795	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	58.3357671449949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCTGACTTCTATTTGGC	NA	False	NA	8	True	AATAAA	-18	NA	52109732	52197474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
m54284U_201201_044215/177080517/ccs	chr3	-	2909	7	NNC	ENSMUSG00000027599.10	novel	3673	7	NA	NA	0	-746	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	91.40280204798	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCAGTTATTGTATTTT	NA	False	NA	-10	True	AATAAA	-16	NA	19217229	19186311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_19188370_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
m54284U_201201_044215/1770904/ccs	chr3	-	5670	5	NIC	ENSMUSG00000044864.17	novel	4945	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	7.49583217528247	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGTCCACTAACCTTC	NA	False	NA	-12	True	AATAAA	-17	NA	38538993	38506227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839_38538134_38538819
m54284U_201201_044215/177144141/ccs	chr2	-	1176	6	NNC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	133	-125	at_least_one_novel_splicesite	FALSE	canonical	3	210	junction_2	881.92298983528	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8358	False	NA	-4	True	AATAAA	-20	NA	132095101	132091206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_132091616_132091693_132091818_132093247_132093359_132093610_132093679_132093822_132093921_132094735
m54284U_201201_044215/177145594/ccs	chr4	-	2622	13	NIC	ENSMUSG00000028680.15	novel	2378	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	135	junction_10	16.3018403869011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAAGGCCTTATCATTCC	3219	False	NA	2	True	AATAAA	-15	NA	116991160	116985851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990503_116990591_116990700_116990848
m54284U_201201_044215/177146160/ccs	chr5	-	2140	13	NIC	ENSMUSG00000033294.12	novel	2075	15	NA	NA	0	-167	intron_retention	FALSE	canonical	3	610	junction_8	52.3372477304644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTAGTGTGGTT	8841	False	NA	-11	True	AATAAA	-15	NA	110801283	110796450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
m54284U_201201_044215/1771902/ccs	chr4	-	1845	11	NNC	ENSMUSG00000028484.17	novel	1898	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	221	junction_1	470.836925060047	278	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404696	83380107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_83380657_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
m54284U_201201_044215/177209584/ccs	chr6	-	211	1	Intergenic	novelGene_3462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGTGAAAACCA	786	False	NA	NA	False	NA	NA	NA	120472727	120472516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120472500_120472700
m54284U_201201_044215/177276735/ccs	chr2	+	2857	14	NNC	ENSMUSG00000026917.16	novel	2890	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_13	411.205890064416	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCATATAAGTTTG	NA	False	NA	33	True	AATAAA	-19	NA	27405168	27426547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424801
m54284U_201201_044215/177276956/ccs	chr17	+	1989	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	49.7543967906355	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	334	False	NA	17	True	AATAAA	-19	NA	28532520	28545546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545067
m54284U_201201_044215/177277243/ccs	chr2	-	1626	8	NIC	ENSMUSG00000036352.17	novel	1852	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	287.467691174831	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTACTTCATGGC	NA	False	NA	-3	True	AATAAA	-20	NA	25911759	25888554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25889080_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
m54284U_201201_044215/177341138/ccs	chr18	-	173	1	Intergenic	novelGene_8879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAGGAAA	8086	False	NA	NA	False	NA	NA	NA	35110722	35110549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35110500_35110700
m54284U_201201_044215/177342745/ccs	chr1	+	1649	7	NIC	ENSMUSG00000026150.15	novel	1706	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_4	124.696520489636	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702639	82730111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82728240_82728326_82729305
m54284U_201201_044215/177406024/ccs	chr3	-	3443	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	221.790525129089	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/177407099/ccs	chr17	-	1105	4	ISM	ENSMUSG00000024053.12	ENSMUST00000233148.2	758	5	12251	-843	0	0	3prime_fragment	FALSE	canonical	2	7	junction_2	4.49691252107735	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCCTTTTCTGTATTT	NA	False	NA	-7	True	AATAAA	-15	NA	71563341	71559168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318
m54284U_201201_044215/177408501/ccs	chr3	-	3526	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	216.717534131413	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201201_044215/177473479/ccs	chr2	-	1318	8	Fusion	ENSMUSG00000089662.2_ENSMUSG00000027309.19	novel	1984	7	NA	NA	0	115	multi-exon	TRUE	canonical	3	31	junction_1	16.7063473211928	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTGTGTATGTGT	NA	False	NA	1	True	AATAAA	-32	NA	130682057	130645305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_-_130645843_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
m54284U_201201_044215/177473752/ccs	chr8	-	172	1	Intergenic	novelGene_4290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGATATGTAATATTC	NA	False	NA	NA	False	NA	NA	NA	47799771	47799599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_47799600_47799800
m54284U_201201_044215/177474282/ccs	chr16	-	174	1	Intergenic	novelGene_8056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	10838834	10838660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_10838700_10838800
m54284U_201201_044215/177537612/ccs	chr11	-	2392	8	NIC	ENSMUSG00000017561.17	novel	2396	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	246.701505169833	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTTGTGGTTTTTTGT	4488	False	NA	-3	True	AATAAA	-20	NA	79971817	79937318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971613
m54284U_201201_044215/177539187/ccs	chr4	+	838	5	NNC	ENSMUSG00000028773.9	novel	823	4	NA	NA	146	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	2159.9895109699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTCTGTCTTTGGTCCTC	NA	False	NA	31	True	AATAAA	-20	NA	130202533	130209256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130202644_130203234_130203396_130206083_130206257_130207746_130207849_130208964
m54284U_201201_044215/177539724/ccs	chr6	+	1718	6	NNC	ENSMUSG00000029836.16	novel	1889	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	948.65175907706	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447645	51460684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_51447720_51448795_51448849_51452210_51452319_51455417_51455581_51458703_51458799_51459459
m54284U_201201_044215/177602865/ccs	chr7	+	2827	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	256.961299372104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201201_044215/177604748/ccs	chr4	-	5040	5	NNC	ENSMUSG00000078584.10	novel	7151	5	NA	NA	0	-2069	intron_retention	FALSE	canonical	3	12	junction_4	164.079820514285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATCAACCTTGCTGGC	NA	False	NA	NA	False	NA	NA	NA	119089909	119079107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089821
m54284U_201201_044215/177605188/ccs	chr5	-	3694	21	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	0	-1969	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	231.433273320843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996689	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996524
m54284U_201201_044215/177605326/ccs	chr1	-	189	1	Intergenic	novelGene_406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTCGATGAGCAAGCC	NA	False	NA	NA	False	NA	NA	NA	156361545	156361356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_156361400_156361500
m54284U_201201_044215/17761921/ccs	chr8	+	2926	18	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	109.401644060697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7347	False	NA	16	True	AATAAA	-20	NA	111345216	111447030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
m54284U_201201_044215/177734207/ccs	chr4	-	2867	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_18	115.743916993454	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980882	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980697
m54284U_201201_044215/177734658/ccs	chr10	-	184	1	Intergenic	novelGene_5421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACATTAAAAC	4738	False	NA	NA	False	NA	NA	NA	75927765	75927581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75927600_75927800
m54284U_201201_044215/177736450/ccs	chr17	+	1672	8	NNC	ENSMUSG00000023827.9	novel	695	3	NA	NA	31642	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	89.8518054285806	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAGTGTTTACACAA	5665	False	NA	28	True	ATTAAA	-19	NA	12402300	12438532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_12402448_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
m54284U_201201_044215/177799504/ccs	chr10	-	3164	17	NIC	ENSMUSG00000020048.14	novel	2825	18	NA	NA	61	0	intron_retention	FALSE	canonical	3	2860	junction_10	350.123460367911	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGCTTATTTTCATAA	NA	False	NA	-40	True	AATAAA	-16	NA	86541312	86526703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
m54284U_201201_044215/177799728/ccs	chr6	-	4428	20	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	142	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_18	37.2191235508675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCCTAGTGAGTGTAT	NA	False	NA	-7	True	AATAAA	-21	NA	39534659	39439311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415_39504518_39534508
m54284U_201201_044215/177800071/ccs	chr17	-	4261	7	NIC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	45.4266808531433	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123111	47109045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123064
m54284U_201201_044215/177865709/ccs	chr11	+	2703	11	NNC	ENSMUSG00000034773.17	novel	2813	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	126.309144562062	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCGTCCCACACCTCCT	NA	False	NA	15	True	AATAAA	-22	NA	102139707	102156013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_102139919_102141504_102141556_102145289_102145446_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
m54284U_201201_044215/177866303/ccs	chr16	+	3116	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	0	154	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	64.5519023490851	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGGCTGAATCTTTA	NA	False	NA	6	True	AATAAA	-19	NA	17437223	17461365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_17437299_17439305_17439390_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
m54284U_201201_044215/177930588/ccs	chr9	+	1807	4	NIC	ENSMUSG00000010047.13	novel	544	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	100.360461448831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTTCTTGTCTTTTT	NA	False	NA	11	True	ATTAAA	-13	NA	107446593	107449971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107446629_107447302_107448270_107448690_107448781_107449256
m54284U_201201_044215/177931785/ccs	chr2	+	2043	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_8	672.651113625152	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120816
m54284U_201201_044215/177931830/ccs	chrX	-	1284	10	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	84	junction_7	628.476602194682	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974398	72965726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973792_72973869_72974013_72974124_72974319
m54284U_201201_044215/177932256/ccs	chr17	-	199	1	Intergenic	novelGene_8433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCAACATGGGGACTGG	NA	False	NA	NA	False	NA	NA	NA	26491605	26491406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26491400_26491600
m54284U_201201_044215/177932804/ccs	chr3	-	157	1	Intergenic	novelGene_1379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	False	NA	NA	False	NA	NA	NA	34082116	34081959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_34082000_34082100
m54284U_201201_044215/177933052/ccs	chr12	-	171	1	Intergenic	novelGene_6757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	80518021	80517850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80517800_80518000
m54284U_201201_044215/177996052/ccschrUn	chrUn_JH584304v1	-	2682	6	Intergenic	novelGene_9769	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_3	309.65464634008	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55511_55702_58563_58836_59591
m54284U_201201_044215/177997555/ccs	chr4	+	2606	9	NIC	ENSMUSG00000028645.12	novel	2241	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	565	junction_3	56.7735358683956	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTTCAAATGCTTGTG	669	False	NA	36	True	TATAAA	-18	NA	118966000	118994527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
m54284U_201201_044215/177998295/ccs	chr11	+	2724	5	NIC	ENSMUSG00000020149.18	novel	2827	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	65	junction_2	830.517007652462	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCGCTTGTTGGGTCTAT	NA	False	NA	NA	False	AATAAA	-24	NA	20151438	20176856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_20151653_20165629_20165703_20173083_20173180_20174366_20174499_20174647
m54284U_201201_044215/177998634/ccs	chr1	+	4792	7	ISM	ENSMUSG00000025949.17	ENSMUST00000188799.7	4083	11	-10	16718	0	0	5prime_fragment	FALSE	canonical	3	73	junction_1	15.5536705207056	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	65225841	65248558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747
m54284U_201201_044215/178062846/ccs	chr11	-	4001	19	NNC	ENSMUSG00000032782.20	novel	3861	19	NA	NA	-131	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_18	27.2352009876833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTAAGAATGTTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	69214732	69190312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213506
m54284U_201201_044215/178127157/ccs	chr5	-	1464	7	NNC	ENSMUSG00000052776.11	novel	1885	7	NA	NA	0	-463	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	226.213026444839	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGTGAACTCTGAGGA	NA	False	NA	NA	False	AATAAA	-19	NA	121045584	121034781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_121035088_121035242_121035312_121036381_121036536_121037135_121037369_121039932_121040118_121043658_121043948_121045356
m54284U_201201_044215/178127307/ccs	chr10	+	2679	21	NIC	ENSMUSG00000019802.14	novel	6032	21	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_15	52.0279732451688	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGTGGGCTGTGCATT	NA	False	NA	23	True	AATAAA	-23	NA	42637610	42705279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688663_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
m54284U_201201_044215/178129094/ccs	chr11	-	2043	10	NIC	ENSMUSG00000018362.15	novel	2054	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	2432	junction_9	276.995431615401	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGTTTTCTTAATTGA	9757	False	NA	NA	False	AATAAA	-27	NA	106890276	106879454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
m54284U_201201_044215/178129516/ccs	chr2	+	278	1	Intergenic	novelGene_626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCCAATCCACACAACTA	NA	False	NA	NA	False	NA	NA	NA	24750460	24750738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_24750500_24750700
m54284U_201201_044215/178192620/ccs	chr4	+	1599	11	NIC	ENSMUSG00000074088.7	novel	1584	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	443.970956257276	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACCTTGTGACTTGG	NA	False	NA	22	True	ATTAAA	-23	NA	130253986	130283819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130267134_130267212_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
m54284U_201201_044215/178192646/ccs	chr8	-	2803	13	NNC	ENSMUSG00000038225.16	novel	3943	14	NA	NA	0	266	intron_retention	FALSE	canonical	3	18	junction_6	37.1044883478476	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATGCCTGGTGATGACT	NA	False	NA	-4	True	ATTAAA	-19	NA	47070247	47031631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
m54284U_201201_044215/178194254/ccs	chr4	-	2413	9	NIC	ENSMUSG00000006219.13	novel	3101	9	NA	NA	0	-657	combination_of_known_junctions	FALSE	canonical	3	77	junction_8	503.602134005606	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTAGCGGCGACCCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	141325535	141304029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325424
m54284U_201201_044215/17826166/ccs	chr14	+	4340	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_36	171.166493338546	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
m54284U_201201_044215/17826209/ccs	chr2	-	3098	4	NIC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	494	junction_1	44.1134900002256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTTTTGAATTTA	NA	False	NA	1	True	AATAAA	-22	NA	75534833	75505856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_75507529_75507888_75508922_75509506_75509774_75534707
m54284U_201201_044215/17827328/ccs	chr11	-	2223	11	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	107	junction_6	262.845981517694	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8530	False	NA	-5	True	AATAAA	-17	NA	69572672	69563940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69569052_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
m54284U_201201_044215/17828285/ccs	chr2	+	8601	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_16	104.328865719044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6650	False	NA	24	True	AATAAA	-40	NA	32041093	32124549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106156_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
m54284U_201201_044215/17828451/ccs	chr9	+	196	1	Intergenic	novelGene_4856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	64011285	64011481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64011300_64011500
m54284U_201201_044215/178324115/ccs	chr16	-	1754	14	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	0	113	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	1339.65113360282	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTGTTTAATCACT	NA	False	NA	-24	True	AATAAA	-14	NA	87292761	87280762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87292616
m54284U_201201_044215/178389577/ccs	chr7	+	3755	27	NIC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	272.840832395896	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2629	False	NA	30	True	AATAAA	-18	NA	13012760	13045350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
m54284U_201201_044215/178390627/ccs	chr5	+	166	1	Intergenic	novelGene_2841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTTTGAAAGAAAGA	1054	False	NA	1	True	NA	NA	NA	120656441	120656607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_120656400_120656600
m54284U_201201_044215/178391568/ccs	chr13	-	1343	7	NIC	ENSMUSG00000060147.16	novel	1504	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	142.613697331872	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGAACTGTCTGTCTG	8607	False	NA	-7	True	AATAAA	-19	NA	34119831	34101909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119749
m54284U_201201_044215/178455246/ccs	chr5	+	1317	7	NNC	ENSMUSG00000029304.15	novel	1456	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	210	junction_6	2188.43708817249	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGTCTGGTGGTGTCA	NA	False	NA	28	True	AATAAA	-15	NA	104582986	104588913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588181
m54284U_201201_044215/178455474/ccs	chr11	-	3499	27	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	0	-1411	combination_of_known_splicesites	FALSE	canonical	3	45	junction_25	39.8224610285058	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463746	33163205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
m54284U_201201_044215/178521320/ccs	chr4	-	1903	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_1	398.788756388921	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_148702283_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
m54284U_201201_044215/178522317/ccs	chr4	+	1385	7	NIC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	264.974212581778	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407541	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_117407928_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
m54284U_201201_044215/178585868/ccs	chr11	-	1887	8	NNC	ENSMUSG00000014606.15	novel	770	6	NA	NA	0	10336	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	253.252394875555	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGATGGTTTCGTTA	NA	False	NA	NA	False	NA	NA	NA	70537804	70524685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_70525668_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
m54284U_201201_044215/178587329/ccs	chr8	-	1491	10	NIC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_4	154.696676526663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	594	False	NA	-9	True	NA	NA	NA	71725122	71703768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
m54284U_201201_044215/178588122/ccs	chr7	-	3538	8	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	-138	-338	intron_retention	FALSE	canonical	3	338	junction_3	36.6361035268852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGCCTTGTTATTTGAA	1404	False	NA	-1	True	AATGAA	-18	NA	126807778	126796968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
m54284U_201201_044215/178588308/ccs	chr18	+	4225	12	NIC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_8	36.435156938828	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATAAAGGTAGTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	53995193	54088620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54086316
m54284U_201201_044215/178588387/ccs	chr3	+	1901	5	NIC	ENSMUSG00000037661.15	novel	346	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	111.904814463007	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910098	30951341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_30910207_30931383_30931482_30944090_30944191_30948277_30948390_30949858
m54284U_201201_044215/178651699/ccs	chr5	-	3706	4	NIC	ENSMUSG00000046798.15	novel	3597	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	26.5455583227527	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTGTCTCTGTCCTTTT	NA	False	NA	-5	True	ATTAAA	-15	NA	5564912	5555110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_5558455_5561070_5561195_5563161_5563252_5564764
m54284U_201201_044215/178716781/ccs	chr12	-	173	1	Intergenic	novelGene_6571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAATCTGAGAA	NA	False	NA	NA	False	NA	NA	NA	15746617	15746444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_15746400_15746600
m54284U_201201_044215/178719069/ccs	chr7	+	753	6	NIC	ENSMUSG00000002043.18	novel	785	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	193.692126840509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCAGTGCTTATCACA	521	False	NA	21	True	AGTAAA	-22	NA	19242650	19250070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_19242758_19248125_19248194_19248346_19248465_19248949_19249016_19249128_19249223_19249770
m54284U_201201_044215/178784949/ccs	chr11	-	2339	12	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	831	junction_11	110.238659205703	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
m54284U_201201_044215/178849545/ccs	chr4	+	2668	18	NIC	ENSMUSG00000028886.16	novel	5160	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	22.5258021989425	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAAGTTCTGTCCCAG	NA	False	NA	28	True	NA	NA	NA	132366356	132449446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132408066_132408205_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
m54284U_201201_044215/178849679/ccs	chr16	-	3929	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_16	336.795184852445	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
m54284U_201201_044215/178849783/ccs	chr10	+	1511	11	NNC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	66.2483207334344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1369	False	NA	18	True	TATAAA	-21	NA	81104054	81109070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_81104154_81105148_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
m54284U_201201_044215/178914311/ccs	chr10	-	185	1	Intergenic	novelGene_5479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGGGGCATCAAACACT	6512	False	NA	NA	False	NA	NA	NA	83527623	83527438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_83527400_83527600
m54284U_201201_044215/178914503/ccs	chr11	+	4622	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-380	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_19	71.139223468114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCAATGGTACAGTA	NA	False	NA	33	True	AATAAA	-29	NA	21188900	21271136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_21189372_21213198_21213355_21214629_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21264918_21265027_21266791_21266887_21269752
m54284U_201201_044215/178915001/ccs	chr7	+	3817	17	NNC	ENSMUSG00000030852.19	novel	2557	15	NA	NA	5078	0	intron_retention	FALSE	canonical	2	5	junction_2	101.953401580085	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130203125	130366515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_130203462_130203566_130203668_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
m54284U_201201_044215/178915548/ccs	chr15	+	1762	10	NIC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_8	5026.29424890179	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148858	103153382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152385_103152456_103152682
m54284U_201201_044215/17893328/ccs	chr5	+	4326	11	NIC	ENSMUSG00000014932.16	novel	4586	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_1	237.141729773568	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768514	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_32769182_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
m54284U_201201_044215/179044400/ccs	chr2	-	2628	1	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	0	-7631	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGTTAATTGACTTC	9502	False	NA	NA	False	NA	NA	NA	154411812	154409184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_154409200_154411800
m54284U_201201_044215/179045106/ccs	chr6	-	1699	8	NIC	ENSMUSG00000029922.16	novel	2992	8	NA	NA	0	128	combination_of_known_junctions	FALSE	canonical	3	157	junction_7	1165.4745726921	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTTGTAACATGAATTT	NA	False	NA	-31	True	AATAAA	-12	NA	39397001	39375948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39396773
m54284U_201201_044215/179046083/ccs	chr19	+	185	1	Antisense	novelGene_ENSMUSG00000117905.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAAATAAAACGAGT	3141	False	NA	NA	False	NA	NA	NA	4218980	4219165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_+_4219000_4219200
m54284U_201201_044215/179047055/ccs	chr7	+	2805	15	NIC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	287.995748267936	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7239	False	NA	21	True	ATTAAA	-16	NA	109617521	109655322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109650680_109650735_109651917_109652125_109653206_109653324_109654223
m54284U_201201_044215/179047134/ccs	chr3	+	2142	8	NIC	ENSMUSG00000028098.14	novel	2209	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	253.528165323391	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGCTTCAGCGTCTCAA	4803	False	NA	14	True	AATAAA	-21	NA	96634987	96698468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96635227_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
m54284U_201201_044215/179110035/ccs	chr5	+	5027	19	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	458	junction_5	43.3083973837709	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATACTCAGTATTTAT	NA	False	NA	18	True	ATTAAA	-25	NA	45827260	45857469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
m54284U_201201_044215/179112590/ccs	chr8	-	2189	7	NNC	ENSMUSG00000031758.11	novel	2411	7	NA	NA	59811	-88	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_6	23.3571307218065	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAAGTGGAAATTCTGA	NA	False	NA	-23	True	AATATA	-15	NA	117399919	117301226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350522_117351106_117399859
m54284U_201201_044215/179175523/ccs	chr11	-	607	3	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	132	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATCAAGTTATTGAAGT	NA	False	NA	-15	True	AATAAA	-25	NA	62172201	62158049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_62158433_62159529_62159635_62172082
m54284U_201201_044215/179176900/ccs	chr12	+	1879	14	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	197	junction_1	321.388242421629	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCTCTTGTATAAGTA	NA	False	NA	13	True	AATAAA	-18	NA	110413553	110537345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
m54284U_201201_044215/179177958/ccs	chr2	+	1639	4	NIC	ENSMUSG00000027357.17	novel	1924	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	107	junction_2	299.273564931263	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	1622	False	NA	13	True	AATAAA	-28	NA	132688585	132708705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_132689046_132691785_132691924_132706009_132706102_132707756
m54284U_201201_044215/179178258/ccs	chr13	+	223	1	Intergenic	novelGene_7268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATAATTTGGAACA	NA	False	NA	NA	False	NA	NA	NA	97526557	97526780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97526600_97526800
m54284U_201201_044215/179178325/ccs	chr1	-	175	1	Intergenic	novelGene_190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCGGAGCAGTCAAGGAC	NA	False	NA	NA	False	NA	NA	NA	74713985	74713810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_74713800_74714000
m54284U_201201_044215/179241134/ccs	chr5	+	5045	19	NNC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_8	31.1695879003323	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTGTTTTTATTACC	NA	False	NA	NA	False	AATAAA	-23	NA	147366970	147485312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463331_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
m54284U_201201_044215/179307781/ccs	chr14	+	1638	7	NIC	ENSMUSG00000039599.17	novel	4483	8	NA	NA	0	496	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	97.9007433861233	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAATATGTTCTTTAA	NA	False	NA	13	True	NA	NA	NA	20398229	20418631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_20398463_20401379_20401485_20402771_20402906_20406422_20406566_20408091_20408209_20413330_20413519_20417913
m54284U_201201_044215/179308975/ccs	chr9	+	5145	20	NIC	ENSMUSG00000032280.17	novel	4646	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	51.1700765223381	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTGTTTTAATTGCCT	NA	False	NA	46	True	AAAAAG	-11	NA	61279647	61325779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
m54284U_201201_044215/179372692/ccs	chr2	+	5565	17	NIC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	86.4598669542696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038653	156151872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
m54284U_201201_044215/179373243/ccs	chr12	+	178	1	Intergenic	novelGene_6564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATGAGTCAGAATC	NA	False	NA	NA	False	NA	NA	NA	11133460	11133638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_11133500_11133600
m54284U_201201_044215/179374523/ccs	chr10	+	3973	20	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_19	54.0120023595864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTGTCCGAGCCGGG	NA	False	NA	NA	False	NA	NA	NA	88215087	88276724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88276483
m54284U_201201_044215/179439011/ccs	chr14	-	3154	22	NIC	ENSMUSG00000033166.12	novel	5150	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_20	122.265648850725	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTATTGAGTTGCTGA	2527	False	NA	-11	True	AATACA	-24	NA	99337206	99314705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336554_99336623_99336881
m54284U_201201_044215/179440164/ccs	chr19	+	6946	21	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	52	-2771	intron_retention	FALSE	canonical	3	1554	junction_4	146.336350576335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919410	38956724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38919520_38919834_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
m54284U_201201_044215/179440389/ccs	chr19	-	961	6	NIC	ENSMUSG00000038155.12	novel	797	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1174	junction_5	1038.62948157656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGTCTTTGGTGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	4092263	4090286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4090540_4090707_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
m54284U_201201_044215/179504554/ccs	chr19	+	1176	4	NNC	ENSMUSG00000056201.9	novel	2354	4	NA	NA	342	0	intron_retention	FALSE	canonical	3	171	junction_1	2854.92428387631	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATGGCTTTTGGGTTTGG	NA	False	NA	12	True	NA	NA	NA	5540934	5544057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_5541077_5542524_5542833_5543182_5543260_5543408
m54284U_201201_044215/179504661/ccs	chrX	-	4236	27	NIC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	-126	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_22	111.604357192624	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59224575	59101315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223941
m54284U_201201_044215/179505106/ccs	chr4	-	4194	21	NIC	ENSMUSG00000028207.19	novel	6646	23	NA	NA	0	-2205	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	118.694092102345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	4	True	NA	1	True	AATAAA	-22	NA	9669086	9451283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
m54284U_201201_044215/179571054/ccs	chr7	-	3184	19	NIC	ENSMUSG00000061028.8	novel	2180	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	190	junction_18	25.6563230721054	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATGCTGTCCCCTTATT	NA	False	NA	-4	True	AATAAA	-26	NA	19338411	19314962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
m54284U_201201_044215/17957618/ccs	chr14	+	194	1	Intergenic	novelGene_7560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGCTGATGGTCATGG	7712	False	NA	NA	False	NA	NA	NA	79712019	79712213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_79712000_79712200
m54284U_201201_044215/17958230/ccs	chr12	+	3173	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_3	119.000450179221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201201_044215/17958389/ccs	chr9	-	2774	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-132	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	152.382155548607	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGGTTTGTGTTG	NA	False	NA	-9	True	TATAAA	-21	NA	114469252	114415165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114425672_114425740_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
m54284U_201201_044215/17959704/ccs	chr5	+	3108	10	NIC	ENSMUSG00000041264.17	novel	3148	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	135.337438361387	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_149121617_149124517_149124645_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
m54284U_201201_044215/179634307/ccs	chr4	+	148	1	Intergenic	novelGene_1770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTATGATTTTGCACT	NA	False	NA	NA	False	NA	NA	NA	21788369	21788517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_21788400_21788500
m54284U_201201_044215/179635605/ccs	chrX	-	3008	14	NNC	ENSMUSG00000057421.13	novel	4126	10	NA	NA	0	15288	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	332.853540299545	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGGGTGGAAAGGCATT	NA	False	NA	NA	False	NA	NA	NA	95000519	94963652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_94964399_94964751_94964799_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
m54284U_201201_044215/179700287/ccs	chr13	-	219	1	Intergenic	novelGene_7183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGAACCATATGGTTA	NA	False	NA	NA	False	NA	NA	NA	67011599	67011380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_67011400_67011600
m54284U_201201_044215/179766311/ccs	chr17	-	4028	12	ISM	ENSMUSG00000023931.6	ENSMUST00000024725.5	2661	13	0	259	0	0	5prime_fragment	FALSE	canonical	2	16	junction_3	7.09440473277333	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGGACTTAAATTCATT	NA	False	NA	NA	False	NA	NA	NA	53770349	53706175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_53707956_53708462_53708676_53720490_53720699_53728902_53729058_53733239_53733308_53733937_53734022_53744111_53744242_53752772_53752884_53756412_53756594_53758578_53758723_53759588_53759652_53769458
m54284U_201201_044215/179767660/ccs	chr1	-	2694	21	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_20	262.230294779226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215992	63182754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586_63215684_63215923
m54284U_201201_044215/179962653/ccs	chr9	-	1956	9	NNC	ENSMUSG00000031990.16	novel	1942	9	NA	NA	4355	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	79.6441303549734	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTTTGTATTTTTTTT	NA	False	NA	-1	True	ATTAAA	-14	NA	27033491	27008679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_27009698_27010007_27010063_27010140_27010271_27011404_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27033348
m54284U_201201_044215/179963181/ccs	chr8	-	3955	10	NNC	ENSMUSG00000031714.10	novel	4870	10	NA	NA	21252	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_6	37.5443770345651	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGAGCTGTGTTACT	NA	False	NA	-9	True	AATAAA	-15	NA	81585873	81491068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
m54284U_201201_044215/179963840/ccs	chr12	-	1572	13	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	0	-2513	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_9	98.2178700644643	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATCTTGCTTACTAG	NA	False	NA	NA	False	AATAAA	-26	NA	55349783	55328288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55345195_55345301_55345678_55345807_55349378_55349581_55349717
m54284U_201201_044215/180027588/ccs	chr7	+	2116	12	NIC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	100.831419739145	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCAAAAACCCAAAGGGGA	5487	False	NA	NA	False	AATAAA	-29	NA	44865233	44883059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44865299_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
m54284U_201201_044215/180029135/ccs	chr13	-	180	1	Intergenic	novelGene_7020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATAAAGTTTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	36783308	36783128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_36783100_36783300
m54284U_201201_044215/180094233/ccs	chr6	-	2583	24	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	774	junction_16	87.5050309112717	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
m54284U_201201_044215/180158709/ccs	chr2	+	2350	17	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_16	10.9784946030865	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTACGATGTTCTCAGAG	NA	False	NA	NA	False	AATAAA	-13	NA	76236851	76410372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76410132
m54284U_201201_044215/180225310/ccs	chr5	-	183	1	Intergenic	novelGene_2843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATCAAATAATAATAATA	387	False	NA	NA	False	NA	NA	NA	120777259	120777076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_120777100_120777300
m54284U_201201_044215/180225918/ccs	chr3	+	2913	17	NIC	ENSMUSG00000027722.15	novel	2916	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_15	130.436227233848	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474460	37633245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
m54284U_201201_044215/18022682/ccs	chr17	+	5016	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	115.789410137542	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748138	88797961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88793830
m54284U_201201_044215/18025194/ccs	chr16	-	189	1	Intergenic	novelGene_8229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTCCTGAAAACTGAATT	NA	False	NA	NA	False	NA	NA	NA	33481354	33481165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_33481200_33481400
m54284U_201201_044215/180289813/ccs	chr1	-	1707	7	NIC	ENSMUSG00000013997.11	novel	1335	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_6	48.6646689087679	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	884	False	NA	-10	True	AATATA	-8	NA	171173208	171169811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171172758
m54284U_201201_044215/180290333/ccs	chr5	+	1256	5	NIC	ENSMUSG00000029440.16	novel	2597	6	NA	NA	0	434	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	81.8183964643649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGCTGTCAGTATATT	NA	False	NA	22	True	NA	NA	NA	123366320	123387024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_123366508_123377604_123377814_123379894_123379997_123384256_123384346_123386355
m54284U_201201_044215/180488668/ccs	chr9	+	2470	14	NIC	ENSMUSG00000032059.14	novel	2530	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_13	54.0913100459326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTTTCAGTCTGCT	NA	False	NA	38	True	TTTAAA	-45	NA	50686604	50754842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50754033
m54284U_201201_044215/180554317/ccs	chr7	+	4107	20	NNC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_5	86.3204427500525	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTCCATTTGGTC	NA	False	NA	21	True	AATAAA	-22	NA	127187938	127202766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190453_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
m54284U_201201_044215/18154586/ccs	chr9	+	1891	10	NIC	ENSMUSG00000019039.15	novel	1746	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	128	junction_6	18.4357409183867	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGTGAGGCGTGTTC	NA	False	NA	15	True	AATAAA	-17	NA	108447084	108449973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449497_108449591_108449661_108449749
m54284U_201201_044215/18155433/ccs	chr11	-	2604	16	NIC	ENSMUSG00000018433.15	novel	3158	18	NA	NA	50	-268	combination_of_known_splicesites	FALSE	canonical	2	34	junction_13	114.022142099194	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAGCTGCAAAACATC	1180	False	NA	NA	False	NA	NA	NA	107080128	107057756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107077460_107077518_107077634_107077749_107079942
m54284U_201201_044215/18155849/ccs	chr4	-	5587	20	NIC	ENSMUSG00000028906.18	novel	5074	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	36.2164162896367	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	5309	False	NA	NA	False	AATAAA	-21	NA	131802632	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802490
m54284U_201201_044215/18219966/ccs	chr2	+	5368	23	NNC	ENSMUSG00000043241.15	novel	5174	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	62.7902187466164	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	1678	False	NA	17	True	AATAAA	-21	NA	5956279	6061514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_5956365_5957238_5957433_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
m54284U_201201_044215/18220000/ccs	chr16	-	5331	32	NIC	ENSMUSG00000022710.18	novel	3447	32	NA	NA	-529	0	combination_of_known_junctions	FALSE	canonical	2	74	junction_30	229.957200922222	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	6003	False	NA	NA	False	AATAAA	-21	NA	8556813	8507463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8533608_8533784_8534378_8534484_8556067
m54284U_201201_044215/18221098/ccs	chr19	+	2328	8	NIC	ENSMUSG00000034445.9	novel	3130	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	27.7319531315376	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554817	10567193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10554928_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
m54284U_201201_044215/18221673/ccs	chr5	-	701	3	NNC	ENSMUSG00000009013.6	novel	2030	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	367	junction_2	1708.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCTAGTTTGTTCA	NA	False	NA	-1	True	AATAAA	-16	NA	115438993	115436480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_115436893_115438571_115438710_115438842
m54284U_201201_044215/18284715/ccs	chr18	+	219	1	Intergenic	novelGene_8969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGATTAATAATTAAAC	NA	False	NA	NA	False	NA	NA	NA	60612447	60612666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_60612400_60612700
m54284U_201201_044215/18285018/ccs	chr8	-	2913	28	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_17	42.1115834365511	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178348	72161296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173945_72174462_72174504_72178276
m54284U_201201_044215/18285646/ccs	chr8	+	2932	18	NIC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_17	108.822098559751	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7347	False	NA	16	True	AATAAA	-20	NA	111345216	111447030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111446438
m54284U_201201_044215/1836432/ccs	chr6	+	184	1	Intergenic	novelGene_3551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTGTTTAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	134788511	134788695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_134788500_134788700
m54284U_201201_044215/18416674/ccs	chr4	+	194	1	Intergenic	novelGene_2251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTAAATTTAAATAGGG	NA	False	NA	NA	False	NA	NA	NA	135829295	135829489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_135829300_135829500
m54284U_201201_044215/18416923/ccs	chr17	+	1873	11	NIC	ENSMUSG00000002280.12	novel	2555	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	76.6329563569095	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTGTCTGGTACC	6951	False	NA	11	True	AATAAA	-23	NA	25992780	26001770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000705_26000989
m54284U_201201_044215/18417630/ccs	chr5	+	4027	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	671.498880188009	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208606	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108221172_108221321_108228690_108228708_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/18482813/ccs	chr6	-	177	1	Intergenic	novelGene_3247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCGAGGCCCAACACCCG	554	False	NA	NA	False	NA	NA	NA	47636348	47636171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47636200_47636300
m54284U_201201_044215/18482899/ccs	chr4	-	4449	30	NNC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_29	245.859694334908	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	209	False	NA	-6	True	AATAAA	-12	NA	41275144	41194315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41268273_41268346_41275039
m54284U_201201_044215/18546837/ccs	chr11	+	3530	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	84.4375508882156	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072425	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
m54284U_201201_044215/18547015/ccs	chr18	-	4287	4	NNC	ENSMUSG00000053950.11	novel	5012	4	NA	NA	0	-729	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	66.5131565932636	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATGGTGCAAACTGT	5936	False	NA	-22	True	AATAAA	-20	NA	80194697	80170254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_80174210_80180698_80180789_80185863_80185985_80194576
m54284U_201201_044215/18548181/ccs	chr1	+	1784	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	0	-163	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.4879650744496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	AATAAA	-23	NA	9618316	9646963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_9618377_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
m54284U_201201_044215/18549548/ccs	chr6	-	1628	1	Intergenic	novelGene_3349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACAAAAGTTCAGAAAG	NA	False	NA	NA	False	NA	NA	NA	83894713	83893085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_83893100_83894700
m54284U_201201_044215/18612687/ccs	chr18	-	5007	4	NIC	ENSMUSG00000047466.11	novel	5125	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	18.3726850393609	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGACTCTTTCTGAG	NA	False	NA	-8	True	AATAAA	-15	NA	77801683	77719192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_77723025_77730763_77730891_77761595_77762381_77801420
m54284U_201201_044215/18614055/ccs	chr1	+	1907	11	NNC	ENSMUSG00000026203.17	novel	1855	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	13.7873130087048	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGTGGCCTGTGTTCCTC	2237	False	NA	6	True	AATAAA	-16	NA	75213108	75222336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221206_75221235_75221437
m54284U_201201_044215/18614334/ccs	chr3	-	3841	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-243	combination_of_known_junctions	FALSE	canonical	3	158	junction_20	292.852570857569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3507	False	NA	-2	True	AATATA	-16	NA	89959822	89907842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201201_044215/18614598/ccs	chr11	-	144	1	Intergenic	novelGene_6103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	80022504	80022360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80022400_80022500
m54284U_201201_044215/18678961/ccs	chr2	-	190	1	Intergenic	novelGene_974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGGTATTAACAATAT	8627	False	NA	NA	False	NA	NA	NA	104808362	104808172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_104808200_104808400
m54284U_201201_044215/18680504/ccs	chr6	-	3591	11	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	874	junction_10	2524.61263563344	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446874	51438100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
m54284U_201201_044215/18745085/ccs	chr12	+	4307	5	NIC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	-600	intron_retention	FALSE	canonical	3	190	junction_3	17.3114846272641	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120040	113129068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_113120192_113120294_113121788_113124922_113125010_113125332_113125513_113126672
m54284U_201201_044215/18811501/ccs	chr17	-	3613	9	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	0	-543	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	42.4941172399192	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAGTGTTTAATATATT	NA	False	NA	-2	True	NA	NA	NA	79328245	79277590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
m54284U_201201_044215/18874611/ccs	chr5	+	197	1	Intergenic	novelGene_3097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTAACATTTATTTACT	NA	False	NA	NA	False	NA	NA	NA	150613532	150613729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_150613500_150613700
m54284U_201201_044215/18874698/ccs	chr16	-	2069	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1593	junction_7	122.988302081863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746073	17743086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17745157_17745230_17745331_17745408_17745517_17745849
m54284U_201201_044215/18876354/ccs	chr17	-	3239	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	801	junction_12	70.7823465955259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280653	36267710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
m54284U_201201_044215/18876652/ccs	chr9	+	2840	6	NIC	ENSMUSG00000063488.7	novel	4722	5	NA	NA	1170	1078	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	2.92574776766556	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTTCCACAATTTGT	NA	False	NA	NA	False	ATTAAA	-20	NA	122715919	122725543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_122716131_122717488_122718015_122719723_122719872_122721382_122721457_122721749_122721844_122723756
m54284U_201201_044215/18939921/ccs	chr10	-	166	1	Intergenic	novelGene_5643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGACTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	128766868	128766702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128766700_128766900
m54284U_201201_044215/18941825/ccs	chr7	-	1647	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	140.605714471883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAAATTCTCTTAAAATA	NA	False	NA	-13	True	AATAAA	-33	NA	35237118	35193036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_35193357_35193610_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
m54284U_201201_044215/18942143/ccs	chr9	+	1406	7	NIC	ENSMUSG00000031939.17	novel	2818	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_1	217.881275010038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAATAAACTAATGAT	9118	False	NA	-22	True	ATTAAA	-19	NA	15217555	15223373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_15217580_15218168_15218287_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
m54284U_201201_044215/18942579/ccs	chr7	+	2923	4	ISM	ENSMUSG00000030435.17	ENSMUST00000207960.2	904	5	2766	-719	-2179	719	3prime_fragment	FALSE	canonical	3	1693	junction_1	134.120178281354	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCGTTCTCCCTTCCCC	220	False	NA	NA	False	NA	NA	NA	5068047	5072314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_5069538_5070208_5070254_5070542_5070647_5071030
m54284U_201201_044215/19005780/ccs	chr18	+	3491	11	NIC	ENSMUSG00000024423.7	novel	591	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	27	junction_1	239.691051147096	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13107354	13126007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_13107533_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
m54284U_201201_044215/19006421/ccs	chr9	-	2671	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	142	junction_1	26.8365114556165	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGATTCCTGGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	107166978	107132133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_107132548_107132586_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166723
m54284U_201201_044215/19006840/ccs	chr15	+	5425	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	73.4212486414261	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTGGAGAGTGTCTAA	NA	False	NA	16	True	AATAAA	-16	NA	58287316	58329589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
m54284U_201201_044215/19007931/ccs	chr7	-	1114	4	NIC	ENSMUSG00000045251.14	novel	1302	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	9.62635271879577	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAGTGTTTTGTGTTAA	-1	True	NA	-6	True	ATTAAA	-15	NA	127021211	127018140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_127018814_127019181_127019278_127020576_127020691_127020980
m54284U_201201_044215/1901140/ccs	chr8	-	197	1	Intergenic	novelGene_4272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGGAGTTGAGAGCTAA	4796	False	NA	NA	False	NA	NA	NA	40894259	40894062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_40894100_40894300
m54284U_201201_044215/1901337/ccs	chr19	+	3298	13	NIC	ENSMUSG00000024949.18	novel	2863	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_10	326.079521231657	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6425687
m54284U_201201_044215/1901619/ccs	chr15	-	4759	13	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	187.247756254173	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618436	88571236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
m54284U_201201_044215/1901651/ccs	chrX	+	4212	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_9	209.935109021812	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158374327_158374354_158375066
m54284U_201201_044215/1902108/ccs	chrX	-	4612	10	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	42.882267767562	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	-5	True	AATAAA	-35	NA	156381675	156330819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156381491
m54284U_201201_044215/19073489/ccs	chr5	+	2669	4	ISM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	23590	0	23496	0	3prime_fragment	FALSE	canonical	3	98	junction_2	21.6024689946929	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTCTTAGACTTCG	NA	False	NA	24	True	AAAAAG	-6	NA	65529246	65541350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_65529804_65533022_65533292_65536270_65537415_65540651
m54284U_201201_044215/19138034/ccs	chr7	+	1481	6	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	127.53258407168	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795787	140798571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140795854_140796633_140796765_140796941_140797626_140797798_140797931_140798002_140798082_140798182
m54284U_201201_044215/19202975/ccs	chr10	+	4139	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-16442	0	intron_retention	FALSE	canonical	3	32	junction_1	81.6001306057711	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25258114	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_25258259_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201201_044215/19268188/ccs	chr8	+	177	1	Intergenic	novelGene_4274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTACTTTTGCC	NA	False	NA	NA	False	NA	NA	NA	41593229	41593406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_41593200_41593400
m54284U_201201_044215/19270261/ccs	chr8	-	4607	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	0	0	intron_retention	FALSE	canonical	3	94	junction_17	20.7630179629934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTCTGGCCTTATTG	NA	False	NA	-5	True	AAGAAA	-16	NA	124045315	123995039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124040113_124043101_124043196_124044800_124044911_124045213
m54284U_201201_044215/19333127/ccs	chrX	+	2445	4	NIC	ENSMUSG00000042271.14	novel	2532	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	108.812785196512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTCAAGTCTTTCTTA	NA	False	NA	11	True	AATAAA	-22	NA	141009765	141022688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_141009928_141011286_141011378_141019779_141019925_141020641
m54284U_201201_044215/19333456/ccs	chr11	+	2412	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5016	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_5	42.6521295159941	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1440	False	NA	18	True	TATAAA	-20	NA	87739024	87754629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
m54284U_201201_044215/19333648/ccs	chr1	+	203	1	Intergenic	novelGene_224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGATTGAGGCTGGCT	NA	False	NA	NA	False	NA	NA	NA	86210417	86210620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_86210400_86210600
m54284U_201201_044215/19334117/ccs	chr17	-	2690	13	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1762	junction_12	216.662115336812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906482	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
m54284U_201201_044215/19334187/ccs	chr2	-	2933	15	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	223.92901572068	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965543	124929661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
m54284U_201201_044215/19334369/ccs	chr4	+	174	1	Intergenic	novelGene_1850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACCAAAGCAAGCGGGGT	NA	False	NA	NA	False	NA	NA	NA	46198888	46199062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_46198900_46199100
m54284U_201201_044215/19399071/ccs	chrX	+	559	2	Intergenic	novelGene_9523	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	47	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTTTCTGGTTGTGGTA	NA	False	NA	15	True	NA	NA	NA	88052079	88080612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_88052327_88080300
m54284U_201201_044215/19399315/ccs	chr17	-	2263	13	NIC	ENSMUSG00000024095.16	novel	3116	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_9	159.429974178843	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGTTGTTAACTTA	3463	False	NA	-4	True	AATAAA	-16	NA	80369763	80337769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357234_80357322_80358056_80358295_80360951_80361071_80369085
m54284U_201201_044215/19401124/ccs	chr17	-	180	1	Intergenic	novelGene_8522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGGGAAATAAGC	NA	False	NA	NA	False	NA	NA	NA	32508331	32508151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_32508200_32508300
m54284U_201201_044215/19466959/ccs	chr2	-	1146	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	131.97928099609	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2795	False	NA	-22	True	AATAAA	-17	NA	34689766	34669228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675738_34680514_34680668_34685183_34685342_34687386_34687446_34689762
m54284U_201201_044215/19529732/ccs	chr7	-	3555	4	NNC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	218	0	intron_retention	FALSE	canonical	3	387	junction_1	83.9258932365665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126625978	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126622341_126622648_126622879_126623615_126625327_126625399
m54284U_201201_044215/19595961/ccs	chr7	+	2775	14	NIC	ENSMUSG00000030589.16	novel	2296	17	NA	NA	2564	0	intron_retention	TRUE	non_canonical	0	0	junction_2	15.6541769006828	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	417	False	NA	20	True	AAAAAG	-19	NA	28837061	28851046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28849482_28849603_28849717_28850870
m54284U_201201_044215/19596124/ccs	chr8	+	4102	13	NIC	ENSMUSG00000039842.16	novel	4662	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	45.9480382848084	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGCAATAATTTTAATT	NA	False	NA	NA	False	AATAAA	-17	NA	18645591	18853205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
m54284U_201201_044215/19596183/ccs	chr3	+	3042	13	NIC	ENSMUSG00000027677.18	novel	2684	12	NA	NA	0	205	combination_of_known_junctions	FALSE	canonical	2	24	junction_2	66.8561370074248	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCCTGTTTTATTTCT	NA	False	NA	6	True	NA	NA	NA	33854339	33864298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_33854586_33854730_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
m54284U_201201_044215/19662579/ccs	chr4	-	2726	7	NIC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	0	1677	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	122.239859838489	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTAGTTTTT	NA	False	NA	-14	True	AATAAA	-21	NA	133360780	133334302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133360389
m54284U_201201_044215/1966872/ccs	chr18	+	4961	4	NIC	ENSMUSG00000024601.10	novel	3377	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	482	junction_3	34.7658836600865	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGGGTCCTGTGTATT	NA	False	NA	NA	False	AATAAA	-18	NA	58792551	58813440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_58792870_58804279_58804400_58804519_58806439_58810836
m54284U_201201_044215/1968762/ccs	chr9	-	286	1	Intergenic	novelGene_5095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	109698109	109697823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_109697800_109698100
m54284U_201201_044215/19726718/ccs	chr6	-	2889	7	NIC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	2400	junction_4	95.7914401186244	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTGTCTCAGTCAGAC	NA	False	NA	2	True	AATAAA	-35	NA	83294535	83282672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_83283792_83285914_83286041_83286443_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
m54284U_201201_044215/19727703/ccs	chr19	-	5550	16	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.9193931188232	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	57107456	57021705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
m54284U_201201_044215/19728634/ccs	chr6	+	2023	13	NNC	ENSMUSG00000038388.15	novel	1281	10	NA	NA	-212	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	316.186159564267	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTGCGCATCAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	50087627	50175404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_50087869_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
m54284U_201201_044215/19792571/ccs	chr11	-	835	4	NNC	ENSMUSG00000051355.19	novel	4508	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	1024.12705374979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGGTAAAAAAGAGAAACC	NA	False	NA	-31	True	AATATA	-10	NA	22932252	22849758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_22850058_22906152_22906233_22906410_22906693_22932078
m54284U_201201_044215/19792902/ccs	chr13	-	203	2	Intergenic	novelGene_7103	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	4705	junction_1	0	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGTATATATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	55538391	55538007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55538163_55538343
m54284U_201201_044215/19794291/ccs	chr17	+	1688	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	127	junction_8	671.17267524833	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	False	NA	37	True	AATGAA	-26	NA	35460753	35472683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471958_35472085_35472182_35472331_35472448
m54284U_201201_044215/198052/ccs	chr2	-	2601	8	NNC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	0	-1328	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	70.5477114571177	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATTCCTCCTAGCACA	NA	False	NA	NA	False	AATAAA	-19	NA	130471947	130433249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_130433935_130437011_130437074_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130470408_130470556_130471835
m54284U_201201_044215/19857452/ccs	chr3	+	2185	9	NIC	ENSMUSG00000027940.19	novel	2190	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_8	1429.67163515788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGGCTTGACTTTGTTAA	NA	False	NA	19	True	AATAAA	-22	NA	89986971	90008209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
m54284U_201201_044215/19859515/ccs	chr7	-	188	1	Intergenic	novelGene_3811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATCCAGTGCTGTCTTCT	NA	False	NA	NA	False	NA	NA	NA	42306704	42306516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_42306500_42306700
m54284U_201201_044215/198855/ccs	chr17	-	2560	5	NIC	ENSMUSG00000024327.17	novel	2433	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	600	junction_2	23.7526314331697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	False	NA	-6	True	AATAAA	-22	NA	34250636	34247246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249396_34249539
m54284U_201201_044215/19923464/ccs	chr14	+	2023	10	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_9	476.067092480892	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	9014	False	NA	31	True	NA	NA	NA	55777845	55786391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785932
m54284U_201201_044215/19924394/ccs	chr13	+	184	1	Intergenic	novelGene_6980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAGGCTATACTCAA	NA	False	NA	NA	False	NA	NA	NA	19972530	19972714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_19972500_19972700
m54284U_201201_044215/19989160/ccs	chr1	-	202	1	Intergenic	novelGene_235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACCTAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	87058616	87058414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_87058400_87058600
m54284U_201201_044215/19989279/ccs	chr2	-	174	1	Intergenic	novelGene_595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAAAGGGCAGTTTA	NA	False	NA	NA	False	NA	NA	NA	12880548	12880374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_12880400_12880500
m54284U_201201_044215/20054646/ccs	chr16	-	5400	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.4995237987254	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800154	43785395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799982
m54284U_201201_044215/20055418/ccs	chr11	-	3882	26	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	0	0	intron_retention	FALSE	canonical	1	78	junction_13	41.1161087653002	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120992	102086572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
m54284U_201201_044215/20121166/ccs	chr3	+	3082	4	NIC	ENSMUSG00000056260.16	novel	929	3	NA	NA	0	0	intron_retention	FALSE	canonical	1	6	junction_1	13.9124245031395	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTATGGCTTTGTTTTGT	NA	False	NA	31	True	AATAAA	-43	NA	106592302	106643893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_106592450_106638978_106640459_106641673_106641956_106642720
m54284U_201201_044215/20185339/ccs	chr11	-	5103	10	NIC	ENSMUSG00000018428.16	novel	3758	11	NA	NA	72	0	intron_retention	FALSE	canonical	3	816	junction_2	51.917550970413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAGTCCATTTTTTCTT	NA	False	NA	92	True	TATAAA	-7	NA	88755340	88721617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88732129_88735084_88736692_88755222
m54284U_201201_044215/20185491/ccs	chr7	+	3427	1	NIC	ENSMUSG00000030539.14	novel	3949	15	NA	NA	0	-23798	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	79836588	79840015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79836600_79840000
m54284U_201201_044215/20185946/ccs	chr4	-	191	1	Intergenic	novelGene_2338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTGGAACTTATAAAAT	NA	False	NA	NA	False	NA	NA	NA	146281633	146281442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146281400_146281600
m54284U_201201_044215/20250707/ccs	chr12	-	3592	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_7	30.4074262351803	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	NA	False	NA	-37	True	AATAAA	-14	NA	83968641	83840844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
m54284U_201201_044215/20251804/ccs	chr9	-	4003	12	NIC	ENSMUSG00000010205.12	novel	3470	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	427	junction_5	36.2174333621095	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGAGCTGGCTGGTTCTTG	NA	False	NA	-2	True	ATTAAA	-31	NA	21003304	20985453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
m54284U_201201_044215/20252338/ccs	chr17	+	212	1	Intergenic	novelGene_8545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTTTTTTTTTTTTTTT	9062	False	NA	NA	False	AAGAAA	-16	NA	35168133	35168345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35168100_35168300
m54284U_201201_044215/20316852/ccs	chr15	+	3391	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	379	junction_5	54.4306286325386	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761750	78778785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
m54284U_201201_044215/20318511/ccs	chr9	+	5219	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_1	130.967885779775	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	953	False	NA	14	True	AATAAA	-19	NA	103182413	103227627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_103182571_103183300_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
m54284U_201201_044215/2033784/ccs	chr10	-	7355	37	NIC	ENSMUSG00000020196.11	novel	7417	37	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	18.2485201497086	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCTTTGCTCATC	NA	False	NA	-4	True	AATAAA	-13	NA	75600175	75481945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549373_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
m54284U_201201_044215/2033852/ccs	chr17	-	3151	17	NNC	ENSMUSG00000023991.17	novel	3198	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	38.180492401225	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTTGGCTTTTTCTT	NA	False	NA	-3	True	NA	NA	NA	48235401	48178688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_48179729_48180028_48180199_48180649_48180717_48182154_48182277_48185559_48185662_48186279_48186357_48186444_48186614_48186764_48186849_48188065_48188154_48188852_48188958_48189208_48189423_48189531_48189680_48191187_48191275_48191694_48191767_48199049_48199146_48215220_48215460_48235130
m54284U_201201_044215/20381697/ccs	chr12	+	2971	14	NIC	ENSMUSG00000021066.10	novel	5150	15	NA	NA	-227	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_13	5.10597746931572	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAATGCTCACTGGCT	8747	False	NA	7	True	ATTAAA	-21	NA	69939651	70010800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006247_70010001
m54284U_201201_044215/20383016/ccs	chr6	-	173	1	Intergenic	novelGene_3234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAGCATTAAATAT	NA	False	NA	NA	False	NA	NA	NA	39818835	39818662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39818700_39818800
m54284U_201201_044215/20383722/ccs	chrX	+	181	1	Intergenic	novelGene_9464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAAACTCTTAAA	NA	False	NA	NA	False	NA	NA	NA	52019420	52019601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_52019400_52019600
m54284U_201201_044215/20384575/ccs	chr19	+	1786	12	NNC	ENSMUSG00000003559.9	novel	1736	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_11	66.6961780410936	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTCTGTAGTTTGTCT	5974	False	NA	34	True	AATAAA	-44	NA	46695896	46729538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46726951_46726998_46728899
m54284U_201201_044215/20449904/ccs	chr4	+	228	1	Intergenic	novelGene_2427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAAGTAGTCCTGATT	NA	False	NA	NA	False	AATAAA	-34	NA	155457440	155457668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_155457400_155457700
m54284U_201201_044215/20450053/ccs	chr3	+	5668	11	NIC	ENSMUSG00000027763.14	novel	5655	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	36.6727419209418	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGCCTGAGATTGAG	NA	False	NA	28	True	AATAAA	-40	NA	60408640	60537171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
m54284U_201201_044215/20513387/ccs	chr4	-	3592	10	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	277.897263190714	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126080227_126080382_126096362
m54284U_201201_044215/20513523/ccs	chr4	-	1946	4	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	128.416855937563	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	94445033	94388317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_94389654_94409298_94409373_94439501_94439703_94444698
m54284U_201201_044215/20515321/ccs	chr2	-	1782	13	NIC	ENSMUSG00000027610.18	novel	1963	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_3	290.295347687297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAATGACTCATTGTT	8433	False	NA	-10	True	AATAAA	-11	NA	155434647	155405108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155405640_155406679_155406870_155408722_155408805_155409702_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
m54284U_201201_044215/20644018/ccs	chr17	+	1300	12	NIC	ENSMUSG00000003199.17	novel	1701	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	267.709507050626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCACAGCACAAGCCTG	NA	False	NA	9	True	AATAAA	-9	NA	56316207	56323653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56316257_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
m54284U_201201_044215/20644294/ccs	chr12	-	371	1	Intergenic	novelGene_6551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGACAAAGTGGTC	9427	False	NA	NA	False	NA	NA	NA	4898319	4897948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_4897900_4898300
m54284U_201201_044215/20709682/ccs	chr1	+	6017	7	NNC	ENSMUSG00000026434.13	novel	5998	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_4	508.29737577743	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTGCTTCGTGTGCTT	9282	False	NA	27	True	TATAAA	-18	NA	131838271	131864059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855804_131855955_131857350_131857501_131858771
m54284U_201201_044215/20711762/ccs	chr15	-	3261	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	187.837474074442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79802252_79802440_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79855069
m54284U_201201_044215/20711893/ccs	chr15	-	171	1	Intergenic	novelGene_7744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTTTTTAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	67468030	67467859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_67467900_67468000
m54284U_201201_044215/20775866/ccs	chr18	-	3827	16	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-115	-1089	combination_of_known_junctions	FALSE	canonical	3	61	junction_15	10.4234777732237	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATGTTAGTAGTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	67743975	67622932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
m54284U_201201_044215/20776069/ccs	chr2	+	1219	7	NIC	ENSMUSG00000026798.11	novel	1991	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	46.5608920304011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGCTGGTTGTCCTAG	NA	False	NA	27	True	AATAAA	-17	NA	29678282	29686998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685395_29685523_29685947_29686042_29686419
m54284U_201201_044215/20776101/ccs	chr16	-	3896	17	NIC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_15	355.287537601588	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
m54284U_201201_044215/20777460/ccs	chr2	-	4619	1	Intergenic	novelGene_1109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	150249022	150244403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_150244400_150249000
m54284U_201201_044215/20841616/ccs	chr4	-	198	1	Intergenic	novelGene_2073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAAAAAAGAGTAAC	NA	False	NA	NA	False	NA	NA	NA	120548367	120548169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_120548200_120548400
m54284U_201201_044215/20841995/ccs	chr5	-	6985	33	NNC	ENSMUSG00000029202.13	novel	8934	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	110.837996749479	280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGAAACGTGAATATTC	2641	False	NA	NA	False	AATAAA	-27	NA	65855616	65765112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_65767539_65772606_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
m54284U_201201_044215/20842794/ccs	chr14	+	3554	22	NIC	ENSMUSG00000006527.17	novel	7837	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	23.7565124142027	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGGCTCTAGGGTTT	NA	False	NA	27	True	ATTAAA	-19	NA	30437571	30540303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30437833_30460495_30460588_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
m54284U_201201_044215/20906506/ccs	chr6	-	2264	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	91	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	1266.44691076167	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8576	False	NA	-24	True	AATAAA	-16	NA	145021819	144944883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144993017_144993090_145021614
m54284U_201201_044215/20973568/ccs	chr6	-	1548	8	ISM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	2311	0	0	0	3prime_fragment	FALSE	canonical	3	333	junction_3	29.2665442484229	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCCTGTTGTTGGGGT	9275	False	NA	-4	True	AATAAA	-21	NA	88816571	88812895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312
m54284U_201201_044215/20973697/ccs	chr17	-	4798	4	NIC	ENSMUSG00000096433.3	novel	4882	5	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	4	junction_3	4.18993502999218	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTATTGAGTCCTTCAG	NA	False	NA	NA	False	NA	NA	NA	22444597	22416245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_22420791_22421656_22421784_22424285_22424334_22444519
m54284U_201201_044215/2098889/ccs	chr5	+	2975	17	NIC	ENSMUSG00000000600.16	novel	2930	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	59.7316590574044	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTATTTAAACCATTTC	7986	False	NA	10	True	AATAAA	-23	NA	3853184	3891359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
m54284U_201201_044215/2098971/ccs	chr4	+	2697	20	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	49	junction_8	118.738241873048	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724236_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201201_044215/2099106/ccs	chr7	+	3213	8	NIC	ENSMUSG00000001918.18	novel	2764	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1461	junction_4	113.413816960505	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16515292	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16516401_16519600_16519644_16520273_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
m54284U_201201_044215/2099700/ccs	chr9	+	1151	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	-71	-305	-57	14	mono-exon	FALSE	NA	NA	NA	NA	NA	1134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTTCAAGGACTGAGTC	NA	False	NA	NA	False	NA	NA	NA	81559593	81560744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_81559600_81560700
m54284U_201201_044215/2099942/ccs	chr13	-	1991	17	NIC	ENSMUSG00000021639.18	novel	1630	18	NA	NA	0	449	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	76.8251871133419	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTGTCTTCTTAAAACAA	NA	False	NA	NA	False	NA	NA	NA	100629087	100596276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100596929_100605422_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
m54284U_201201_044215/2099979/ccs	chr17	+	1174	6	NIC	ENSMUSG00000061544.14	novel	640	6	NA	NA	-63	436	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	67.9923525111464	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTTTCCTGTAAAGC	NA	False	NA	NA	False	NA	NA	NA	21949712	21988759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_21950033_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21988273
m54284U_201201_044215/21037584/ccs	chr1	+	4649	10	NIC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	0	-172	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	159.507575577672	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTCATTGGTGCTAA	NA	False	NA	3	True	AATAAA	-12	NA	127701900	127733497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725934_127727126_127727291_127729342_127729414_127729898_127731031_127731128
m54284U_201201_044215/21038334/ccs	chr11	-	175	1	Intergenic	novelGene_6490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGGGGGCCTTAT	NA	False	NA	NA	False	NA	NA	NA	117521467	117521292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_117521300_117521500
m54284U_201201_044215/21103351/ccs	chr3	-	1152	7	NIC	ENSMUSG00000027944.14	novel	1139	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_6	656.238629531125	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCTTAGTCTTGGTTT	7267	False	NA	NA	False	AATAAA	-16	NA	89905927	89902762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905411_89905834
m54284U_201201_044215/21169468/ccs	chr4	-	1423	7	NIC	ENSMUSG00000046671.19	novel	2025	7	NA	NA	0	-541	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	192.098643641461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAGTCTCCATAATTG	NA	False	NA	-2	True	AATGAA	-18	NA	134262355	134253415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262215
m54284U_201201_044215/21169802/ccs	chr3	+	4051	19	NIC	ENSMUSG00000063273.12	novel	6090	20	NA	NA	0	1813	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	137.068706300576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGAATATTTCCACT	NA	False	NA	23	True	AATAAA	-16	NA	51323436	51381452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_51323798_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
m54284U_201201_044215/21170878/ccs	chr12	-	1494	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_5	335.592345297419	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111638014_111638199_111638408_111638663
m54284U_201201_044215/21300061/ccs	chr15	-	4769	16	NIC	ENSMUSG00000022246.15	novel	4759	18	NA	NA	-127	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	41.6628798279182	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTGTGGTGTTTGTGA	8713	False	NA	-3	True	AATAAA	-26	NA	10714837	10569054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
m54284U_201201_044215/21300158/ccs	chr11	+	3312	7	NIC	ENSMUSG00000038366.16	novel	376	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	241.808062084143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	5062	False	NA	10	True	AATAAA	-21	NA	97690996	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97691067_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201201_044215/21301586/ccs	chr11	+	195	1	Intergenic	novelGene_5909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGTTACTACGTATACCT	929	False	NA	NA	False	NA	NA	NA	62513352	62513547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_62513400_62513500
m54284U_201201_044215/21364762/ccs	chr2	+	4101	3	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078866.11	novel	794	4	NA	NA	0	2548	intron_retention	FALSE	canonical	3	19	junction_2	43.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177156525	177204104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177156642_177198701_177198829_177200246
m54284U_201201_044215/21366707/ccs	chr2	-	2883	8	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_7	75.6811248136629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26277324_26277567_26277684_26278503_26278573_26279160
m54284U_201201_044215/21431438/ccs	chr8	+	5957	4	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	0	-799	intron_retention	FALSE	canonical	3	434	junction_2	283.832109999321	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATGTACGTGTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	20697984	20726467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr8_+_20698090_20711891_20712098_20717197_20717497_20721120
m54284U_201201_044215/21431894/ccs	chr9	-	3098	10	NIC	ENSMUSG00000061559.16	novel	1290	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	105	junction_8	347.038831569731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACCTGCATTTGTGAAC	5423	False	NA	-8	True	AATAAA	-14	NA	54641801	54624447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637941_54638670_54638722_54641652
m54284U_201201_044215/21496027/ccs	chr1	+	3015	20	NIC	ENSMUSG00000053333.16	novel	3154	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	24.2666397775667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGTGTAGATGCCATG	NA	False	NA	15	True	AATAAA	-16	NA	86631529	86977817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
m54284U_201201_044215/21496237/ccs	chr10	+	3031	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_13	1878.32510687064	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2181	False	NA	32	True	AATAAA	-20	NA	81012464	81018332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017402_81017722
m54284U_201201_044215/21496455/ccs	chr4	-	2127	12	NNC	ENSMUSG00000041135.16	novel	2692	11	NA	NA	0	-634	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTAGTTCAGTTTTT	NA	False	NA	-9	True	AGTAAA	-13	NA	16163647	16123374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
m54284U_201201_044215/21497099/ccs	chr2	+	3679	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	20	junction_3	128.814921304239	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210902	144249596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
m54284U_201201_044215/21497120/ccs	chr11	+	2672	14	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	178	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	63.202408013447	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCCCTTCATTTAA	NA	False	NA	11	True	NA	NA	NA	29476456	29495457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_29476566_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
m54284U_201201_044215/21497679/ccs	chr6	-	156	1	Intergenic	novelGene_3460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTATTATTGATTCAT	NA	False	NA	NA	False	NA	NA	NA	120434461	120434305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120434300_120434500
m54284U_201201_044215/21498119/ccs	chr5	-	6144	20	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_9	42.475216824889	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108016890	107892660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107957455_107957603_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
m54284U_201201_044215/21562332/ccs	chr8	-	2596	8	NIC	ENSMUSG00000052934.15	novel	4358	9	NA	NA	0	1985	intron_retention	FALSE	canonical	3	287	junction_2	21.3837626745727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGCTGAATGACCGGTGC	NA	False	NA	-18	True	AATAAA	-17	NA	122305529	122278752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122286830_122287124_122287202_122293013_122293086_122305196
m54284U_201201_044215/21562689/ccs	chr17	+	2977	19	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	0	522	intron_retention	FALSE	canonical	2	228	junction_10	32.0886599714826	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCCTCTCCTTTGTCC	NA	False	NA	19	True	NA	NA	NA	34174888	34185469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
m54284U_201201_044215/21562959/ccs	chr10	+	3369	27	NIC	ENSMUSG00000040675.18	novel	3535	28	NA	NA	58	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	103.994338717101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAGCTAGTAAAGCCA	NA	False	NA	14	True	AATAAA	-19	NA	3923201	4106111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
m54284U_201201_044215/21627417/ccs	chr2	-	185	1	Intergenic	novelGene_895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAATATGCTTTATTG	NA	False	NA	NA	False	NA	NA	NA	84250388	84250203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_84250200_84250400
m54284U_201201_044215/21628783/ccs	chr9	+	3862	15	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	42.3416618300535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	4669	False	NA	69	True	AATACA	-21	NA	69305204	69340404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_69305336_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
m54284U_201201_044215/21629692/ccs	chr4	+	1908	11	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	8073	junction_10	2945.65562141945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321699	150333330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332397_150332517_150332577_150332942
m54284U_201201_044215/2164670/ccs	chr1	+	158	2	Intergenic	novelGene_303	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	518	junction_1	0	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATGATTATATTCACAT	NA	False	NA	NA	False	NA	NA	NA	131779599	131779916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_131779648_131779806
m54284U_201201_044215/2164990/ccs	chr4	-	151	1	Intergenic	novelGene_2272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	2757	False	NA	NA	False	NA	NA	NA	137342500	137342349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_137342300_137342500
m54284U_201201_044215/2165050/ccs	chr12	+	1352	9	NIC	ENSMUSG00000021037.8	novel	1933	6	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	287	junction_1	889.533691042672	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGACAGCCTTGTG	NA	False	NA	17	True	AGTAAA	-35	NA	87313252	87320772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_87313433_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
m54284U_201201_044215/2165366/ccs	chr7	-	3889	6	NIC	ENSMUSG00000053801.19	novel	1783	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	447	junction_1	34.8390585406667	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACAAGTCCTCTGAGCTT	8628	False	NA	-7	True	AATAAA	-28	NA	45480219	45474653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45479569_45479715_45479834_45480018
m54284U_201201_044215/21692668/ccs	chr4	+	2828	11	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_3	73.2636335435255	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
m54284U_201201_044215/21692693/ccs	chr3	-	3848	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-245	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	228.423841363276	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3507	False	NA	-4	True	AATATA	-14	NA	89959822	89907844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201201_044215/21693259/ccs	chr19	+	5483	12	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	364	junction_11	251.51622854826	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414149_6415693_6415823_6418393_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
m54284U_201201_044215/21695025/ccs	chr15	+	182	1	Intergenic	novelGene_7696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTTTAAAAAGTGTAGG	NA	False	NA	NA	False	NA	NA	NA	39645361	39645543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_39645400_39645500
m54284U_201201_044215/21758004/ccs	chr5	+	148	1	Intergenic	novelGene_2584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATCCTCTACTTA	NA	False	NA	NA	False	AATAAA	-6	NA	65317344	65317492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_65317300_65317500
m54284U_201201_044215/21758492/ccs	chrX	-	1119	2	Intergenic	novelGene_9380	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGAACCGGTGGTTGCG	NA	False	NA	NA	False	NA	NA	NA	9198863	9195221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_9196165_9198687
m54284U_201201_044215/21758826/ccs	chrX	-	1587	11	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1072	junction_9	151.405416019375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
m54284U_201201_044215/21759711/ccs	chr14	+	3059	4	ISM	ENSMUSG00000025290.18	ENSMUST00000224568.2	714	6	-49	-35	0	0	intron_retention	FALSE	canonical	3	776	junction_1	5669.1234086252	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540785	24545926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_24541093_24541817_24541884_24541974_24542185_24543450
m54284U_201201_044215/21759854/ccs	chr1	+	1821	8	NNC	ENSMUSG00000026426.11	novel	1713	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	214.76878882431	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	False	NA	15	True	AATAAA	-19	NA	135074561	135084007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_135074839_135079140_135079249_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
m54284U_201201_044215/21823825/ccs	chr19	-	2910	19	NIC	ENSMUSG00000039148.6	novel	5091	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	368	junction_1	45.1945041999195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTGTGCTGCTGTC	9040	False	NA	-8	True	AATAAA	-19	NA	5438731	5430086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
m54284U_201201_044215/21823867/ccs	chr1	+	192	1	Intergenic	novelGene_250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAATCATGTAGAGAAT	NA	False	NA	NA	False	NA	NA	NA	93414271	93414463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_93414300_93414500
m54284U_201201_044215/21825180/ccs	chr4	-	5711	49	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	0	-1119	combination_of_known_junctions	FALSE	canonical	3	51	junction_48	26.1772719352537	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	2	True	NA	-12	True	AATAAA	-19	NA	58911927	58800029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58911868
m54284U_201201_044215/21825430/ccs	chr8	-	594	4	NIC	ENSMUSG00000058833.12	novel	671	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	348.934887272046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCCCATCAGCTCTGTA	NA	False	NA	-8	True	AATAAA	-17	NA	70959402	70956944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70957160_70958405_70958611_70959146_70959230_70959311
m54284U_201201_044215/21826347/ccs	chr15	+	5967	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	1851	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	161.809454565476	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	31	False	NA	16	True	AATAAA	-17	NA	25754915	25813759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_25755172_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
m54284U_201201_044215/21890632/ccs	chr9	-	3086	22	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_5	37.7146464629211	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
m54284U_201201_044215/21954671/ccs	chr16	-	2502	15	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_10	160.969147126183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406410	30380188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30396616_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
m54284U_201201_044215/21955300/ccs	chr15	+	1471	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	-445	-368	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	4027.9685512675	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTGCTGTGTAAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	103148413	103153014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_103148545_103148909_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
m54284U_201201_044215/21955453/ccs	chr11	+	183	1	Intergenic	novelGene_6193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCTACTAAAACTTGTTG	NA	False	NA	NA	False	NA	NA	NA	88774968	88775151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_88775000_88775200
m54284U_201201_044215/21955531/ccs	chr17	-	3282	16	NIC	ENSMUSG00000024206.16	novel	3350	18	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_15	59.2522292126353	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGGTGTCCGTGTTTG	NA	False	NA	-4	True	NA	NA	NA	57138107	57082899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57137882
m54284U_201201_044215/21955618/ccs	chr17	-	4418	18	NNC	ENSMUSG00000096780.8	novel	1413	17	NA	NA	-10121	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	314.033178772948	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGACTTTTTGTTGCTGTG	2347	False	NA	2	True	AATAAA	-23	NA	6744542	6705922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_6708878_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836_6716919_6717857_6717874_6719286_6719368_6720054_6720166_6724405_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
m54284U_201201_044215/21956670/ccs	chr2	+	2460	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1876	junction_6	264.829662235936	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119545_130119768_130119891_130120075_130120211_130120816
m54284U_201201_044215/21956830/ccs	chr4	+	192	1	Intergenic	novelGene_1898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACAATCACAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	68797112	68797304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_68797100_68797300
m54284U_201201_044215/21957025/ccs	chr5	+	2093	12	Fusion	ENSMUSG00000063646.19_ENSMUSG00000113373.2	novel	516	2	NA	NA	2845	0	multi-exon	FALSE	canonical	3	13	junction_1	47.5912346954217	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	3226	False	NA	17	True	AATAAA	-20	NA	37245558	37282643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr5_+_37245651_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
m54284U_201201_044215/22020548/ccs	chr17	-	3153	17	NIC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	0	-1032	combination_of_known_junctions	FALSE	canonical	3	43	junction_16	200.408917902872	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8737	False	NA	-4	True	AATAAA	-19	NA	24470321	24442203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470154
m54284U_201201_044215/22022956/ccs	chr14	+	2461	7	NIC	ENSMUSG00000040997.15	novel	2401	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_1	140.486555307696	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGACACTGTTTAATA	NA	False	NA	11	True	AATAAA	-18	NA	54496735	54506621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_54496884_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
m54284U_201201_044215/22085684/ccs	chr3	-	2302	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	175	junction_5	22.7614331762454	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTATCTGTTCTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	96634792	96618838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631369_96633149_96633316_96634664
m54284U_201201_044215/22085793/ccs	chr18	+	1042	4	NIC	ENSMUSG00000024273.9	novel	1065	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	89.4886709154976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAATGGTAGTATTTAATT	359	False	NA	17	True	GATAAA	-14	NA	24603925	24610855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24604038_24606006_24606207_24608581_24608782_24610325
m54284U_201201_044215/22086432/ccs	chr7	-	1721	8	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	19619	junction_7	469.367268408292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398342	126394405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
m54284U_201201_044215/22086852/ccs	chr12	+	4583	17	NIC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	408.246995549263	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	NA	False	NA	3	True	AATAAA	-17	NA	110413553	110549496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110541178_110541296_110544534_110544603_110546834
m54284U_201201_044215/22151719/ccs	chr19	-	157	1	Intergenic	novelGene_9273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	43448073	43447916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_43447900_43448100
m54284U_201201_044215/22153903/ccs	chr6	-	185	1	Intergenic	novelGene_3327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAGACAGCACCTGAAGA	NA	False	NA	NA	False	NA	NA	NA	72678931	72678746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_72678700_72678900
m54284U_201201_044215/22218324/ccs	chr11	-	2677	3	Intergenic	novelGene_6092	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGATTTATTTATTTATT	NA	False	NA	-5	True	ATTAAA	-18	NA	79867139	79863321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79863780_79864424_79866420_79866915
m54284U_201201_044215/22282776/ccs	chr8	-	177	1	Intergenic	novelGene_4551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATCTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120646683	120646506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_120646500_120646700
m54284U_201201_044215/22284731/ccs	chr4	-	193	1	Intergenic	novelGene_1740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGTTACTCATTCAAAA	NA	False	NA	NA	False	NA	NA	NA	11084685	11084492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11084500_11084700
m54284U_201201_044215/2229691/ccs	chr16	-	4094	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_3	136.210621220716	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709557	17658218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
m54284U_201201_044215/22347866/ccs	chr1	-	5577	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	0	-729	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	27.3306959689789	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	418	False	NA	-2	True	AATAAA	-23	NA	161704251	161644411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
m54284U_201201_044215/22350676/ccs	chr1	+	4644	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	65.5311630702014	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201201_044215/22413648/ccs	chr11	+	3622	26	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_22	175.249006844547	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745557_115745686_115745888_115745932_115746017_115746080_115746291
m54284U_201201_044215/22479564/ccs	chr11	-	1886	4	NIC	ENSMUSG00000048076.15	novel	1800	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1704	junction_3	291.466407441178	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGCTTGTGTGTCAGT	1847	False	NA	-4	True	AATAAA	-15	NA	59119096	59102239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_59103522_59103646_59103772_59103968_59104350_59118998
m54284U_201201_044215/22479684/ccs	chr11	-	4765	12	NNC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	0	57	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	44.3034241163113	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	3331	False	NA	-1	True	ATTAAA	-27	NA	106503756	106393161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503663
m54284U_201201_044215/22480197/ccs	chr17	-	4876	12	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_5	61.8816519089076	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAAATTGTAGTACAGT	NA	False	NA	-5	True	AATAAA	-19	NA	66756745	66654960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
m54284U_201201_044215/22480282/ccs	chr13	-	3466	28	NIC	ENSMUSG00000016018.5	novel	3689	27	NA	NA	0	83	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	167.672356709118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACAGGCTTCATT	7236	False	NA	-22	True	AATAAA	-21	NA	113063932	113004305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_113004530_113005544_113005650_113005870_113006002_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
m54284U_201201_044215/22481489/ccs	chr11	-	3195	17	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	387	junction_11	55.3114759792215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6779	False	NA	-1	True	AATAAA	-18	NA	100603291	100595571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
m54284U_201201_044215/22610711/ccs	chr8	-	4388	42	NIC	ENSMUSG00000032815.17	novel	4485	43	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_38	27.438124646495	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTGTCTGGCCTTATTG	NA	False	NA	-5	True	AAGAAA	-16	NA	124045315	123995039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039978_124040113_124043101_124043196_124044800_124044911_124045213
m54284U_201201_044215/22611296/ccs	chr4	+	3127	12	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	1144.69642299889	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575826	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155576038_155600091_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
m54284U_201201_044215/22612090/ccs	chr7	-	4306	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	95.8741883929142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184867	80104839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_80105185_80108560_80108745_80110477_80110601_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
m54284U_201201_044215/22676846/ccs	chr14	-	1416	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	0	-111	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	1072.42254236611	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746205	63729906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733324_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
m54284U_201201_044215/22807223/ccs	chr1	-	3181	10	NIC	ENSMUSG00000062729.13	novel	3043	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_7	25.6471787488951	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5189	False	NA	-15	True	AGTAAA	-16	NA	171108760	171104564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171106888_171107003_171107830_171107961_171108097_171108247_171108343_171108446
m54284U_201201_044215/22808524/ccs	chr16	+	2381	21	NIC	ENSMUSG00000003234.17	novel	3090	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_16	72.1245277280898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTGCCTCTCTGCTC	NA	False	NA	4	True	ATTAAA	-13	NA	20367393	20379568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377499_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
m54284U_201201_044215/22808735/ccs	chr7	+	2080	12	NNC	ENSMUSG00000025495.16	novel	408	3	NA	NA	2040	553	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	84.6823915463925	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTCTGGCTGCCCTTT	NA	False	NA	12	True	AATAAA	-17	NA	140714505	140736068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_140714645_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
m54284U_201201_044215/22874051/ccs	chr8	-	4862	6	ISM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	69	12226	0	-7832	5prime_fragment	FALSE	canonical	3	26	junction_4	7.49933330370107	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACACACATTCCTATGACA	NA	False	NA	NA	False	NA	NA	NA	37081028	37047130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
m54284U_201201_044215/22937969/ccs	chr12	+	1326	9	NNC	ENSMUSG00000021103.13	novel	2505	8	NA	NA	-11482	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	125.672938614485	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGTGGGATTTTTT	NA	False	NA	6	True	AATAAA	-16	NA	73159008	73319625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_73159029_73170552_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
m54284U_201201_044215/2293835/ccs	chrX	-	194	1	Intergenic	novelGene_9577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAGAAAAACAGGGATAC	NA	False	NA	NA	False	NA	NA	NA	101284410	101284216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_101284200_101284400
m54284U_201201_044215/22938472/ccs	chr4	+	3229	12	NNC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_11	1228.25489318978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575826	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641829
m54284U_201201_044215/22939020/ccs	chr5	-	1430	8	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	0	90	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_4	301.367834097422	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCGAGTCCTTGCCTGG	NA	False	NA	-8	True	AATACA	-15	NA	35263040	35250322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255031_35255496_35255618_35256500_35256623_35259738_35259884_35262822
m54284U_201201_044215/23003141/ccs	chr8	-	1253	7	NNC	ENSMUSG00000052456.10	novel	1256	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	52	junction_5	767.145502640941	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTTGTCAGTGGATG	8400	False	NA	-4	True	AATAAA	-14	NA	85751910	85744559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746535_85750806_85750955_85751733
m54284U_201201_044215/23003657/ccs	chr10	+	183	1	FSM	ENSMUSG00000081926.2	ENSMUST00000121411.2	114	1	0	-69	0	69	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATTGGGGCATAAAGC	2119	False	NA	NA	False	AATAAA	-37	NA	6988660	6988843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_6988700_6988800
m54284U_201201_044215/23069282/ccs	chr4	+	209	1	Intergenic	novelGene_1772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTCTACCATCATTATCT	NA	False	NA	NA	False	AATAAA	-5	NA	23276642	23276851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_23276600_23276900
m54284U_201201_044215/23070993/ccs	chr17	+	1270	3	NIC	ENSMUSG00000092417.4	novel	1518	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTTTACTTTCTTGAA	4589	False	NA	14	True	AATAAA	-14	NA	35340458	35343790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35340527_35342028_35342636_35343195
m54284U_201201_044215/23137055/ccs	chr5	-	3629	19	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_15	91.6478768621147	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909699	113880506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897388_113899155_113899341_113900889_113900995_113902133_113902261_113909381
m54284U_201201_044215/23201562/ccs	chr17	+	2926	15	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	55	junction_3	461.699323484584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
m54284U_201201_044215/23201736/ccs	chr19	+	4188	11	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_1	34.8007183833897	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159032	42180156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_42159108_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42174389_42177635_42177683_42177960_42178043_42178821
m54284U_201201_044215/23265367/ccs	chr17	-	1616	10	NIC	ENSMUSG00000063576.13	novel	1954	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_9	133.12214756696	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	False	NA	-3	True	TATAAA	-14	NA	46991715	46985478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46991627
m54284U_201201_044215/23266902/ccs	chr7	+	192	1	Intergenic	novelGene_4075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGAGCTGTGTGTGCCT	NA	False	NA	NA	False	NA	NA	NA	125675862	125676054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_125675900_125676100
m54284U_201201_044215/23267264/ccs	chr4	+	3110	2	Genic_Genomic	ENSMUSG00000081998.2_ENSMUSG00000073716.7	novel	260	1	NA	NA	289	1390	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTGAATCCACAGGAC	NA	False	NA	3	True	AATAAA	-38	NA	146560077	146566773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_+_146561061_146564646
m54284U_201201_044215/23268001/ccs	chr7	-	1403	8	NNC	ENSMUSG00000051007.16	novel	1898	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	60.2725104023723	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTTGTTGTTGTTTGT	5495	False	NA	-3	True	NA	NA	NA	140993991	140988098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990735_140990799_140990898_140991005_140991710_140991788_140993914
m54284U_201201_044215/23331406/ccs	chr11	-	4559	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	81.0748351147808	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	8916	False	NA	-8	True	AATAAA	-21	NA	4799465	4715844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
m54284U_201201_044215/23331408/ccs	chr12	-	3415	13	NIC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_12	86.8969296862029	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219378	65179507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65219222
m54284U_201201_044215/23396413/ccs	chr10	+	184	1	Intergenic	novelGene_5250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAACTTTTTCAATTT	9897	False	NA	NA	False	NA	NA	NA	33374345	33374529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_33374300_33374500
m54284U_201201_044215/23398130/ccs	chr4	-	2066	6	NIC	ENSMUSG00000046671.19	novel	1969	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	259	junction_5	107.800927639794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGAATTTTTTTCTTG	NA	False	NA	-7	True	ATTAAA	-16	NA	134262609	134252874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_134253824_134256399_134256722_134257585_134258101_134259454_134259560_134259937_134260064_134262560
m54284U_201201_044215/23398175/ccs	chr15	+	4490	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	0	-234	combination_of_known_junctions	FALSE	canonical	1	32	junction_15	161.528195757556	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	68	False	NA	18	True	AATAAA	-18	NA	12117944	12185535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12171844_12171941_12180707_12180820_12180928_12181027_12184044
m54284U_201201_044215/23462372/ccs	chr19	-	2338	7	NIC	ENSMUSG00000024955.16	novel	2241	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	35.8457342882897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGGTCGGTGAGTCA	9685	False	NA	-1	True	AATATA	-16	NA	6899176	6888345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891661_6897430_6897768_6898989
m54284U_201201_044215/23462419/ccs	chr19	+	2168	15	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_2	200.35734657489	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
m54284U_201201_044215/23463186/ccs	chr12	+	2135	6	NNC	ENSMUSG00000085793.4	novel	2270	6	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	52.6399088145107	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCCAGGTTTTCCTTG	NA	False	NA	5	True	AATAAA	-16	NA	84498284	84578347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509181_84576463
m54284U_201201_044215/23528507/ccs	chr17	+	2208	6	Fusion	ENSMUSG00000057409.8_ENSMUSG00000117037.2	novel	3065	5	NA	NA	0	827	multi-exon	FALSE	canonical	3	7	junction_3	73.6787622045865	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGCTCCTTGGTGGCCA	1475	False	NA	NA	False	AATAAA	-13	NA	21709259	21752084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr17_+_21709528_21711487_21711579_21720472_21720565_21742853_21742938_21748201_21748329_21750538
m54284U_201201_044215/23528787/ccs	chr5	-	2593	14	NIC	ENSMUSG00000029703.11	novel	3139	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	342	junction_8	20.0168568015315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTGGGAAATGAGTG	6757	False	NA	-11	True	ATTAAA	-19	NA	136164855	136151920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162905_136163352_136163588_136164725
m54284U_201201_044215/23530300/ccs	chrX	-	10380	35	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_29	49.6638527492199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972976	104841220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
m54284U_201201_044215/23593007/ccs	chrX	-	2399	8	NIC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	686	junction_4	393.293938993445	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72308996	72298145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
m54284U_201201_044215/23593512/ccs	chr19	+	3417	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_3	41.2349486195184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGTACAAATTGAGTA	NA	False	NA	15	True	AATAAA	-27	NA	47056184	47071918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070761_47070865
m54284U_201201_044215/23593737/ccs	chr4	-	4167	26	NIC	ENSMUSG00000038764.15	novel	6369	26	NA	NA	0	-2131	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	7.95044652834041	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGGTATTTTTAAATA	8	True	NA	-15	True	AATAAA	-15	NA	57300375	57192971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57300280
m54284U_201201_044215/23595849/ccs	chr17	-	214	1	Intergenic	novelGene_8388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACATCCATAAAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	17715567	17715353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_17715400_17715600
m54284U_201201_044215/2359823/ccs	chr9	+	245	1	Intergenic	novelGene_4876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTTCCAATCAAAGTGG	NA	False	NA	NA	False	GATAAA	-1	NA	64902058	64902303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64902100_64902300
m54284U_201201_044215/23659930/ccs	chr16	-	4201	1	Intergenic	novelGene_8300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGATTCTGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	82008776	82004575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_82004600_82008800
m54284U_201201_044215/23661125/ccs	chr1	+	1869	5	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1107	junction_1	23.878599205146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	46	False	NA	32	True	NA	NA	NA	180731887	180735653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_180732096_180732308_180732380_180733438_180734253_180734354_180734519_180735041
m54284U_201201_044215/23724294/ccs	chr15	+	3627	24	NNC	ENSMUSG00000023032.13	novel	374	2	NA	NA	-992	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	9.13643695054198	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTTTCTCTGATACTC	3523	False	NA	11	True	ATTAAA	-19	NA	100678142	100713816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_100678323_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
m54284U_201201_044215/23790069/ccs	chr8	+	3679	11	NIC	ENSMUSG00000037656.10	novel	3566	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	167.823717036657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22966803	23059628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_22967055_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
m54284U_201201_044215/23790580/ccs	chr14	+	4502	24	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_6	85.7457665656559	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724403	20744920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
m54284U_201201_044215/23791087/ccs	chr2	+	2611	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	0	1065	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	106.582877246874	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTGGTGTAATACTG	NA	False	NA	NA	False	AATAAA	-21	NA	69553197	69580957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_69553302_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
m54284U_201201_044215/23791554/ccs	chr17	+	749	6	NNC	ENSMUSG00000024217.11	novel	1013	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	811.755529700907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTCCCTGTCCCTTGCA	NA	False	NA	21	True	AATAAA	-23	NA	28059108	28070942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_28059180_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
m54284U_201201_044215/2383/ccs	chr11	+	2569	1	Intergenic	novelGene_6327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACTCAATACTGCTCTT	NA	False	NA	NA	False	NA	NA	NA	100998291	101000860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_100998300_101000900
m54284U_201201_044215/23855480/ccs	chr4	+	2689	12	NIC	ENSMUSG00000028212.17	novel	2908	12	NA	NA	0	-198	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	73.3862193472497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGTAGA	315	False	NA	26	True	AATAAA	-36	NA	11191735	11204477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_11191808_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
m54284U_201201_044215/23922020/ccs	chr15	-	1645	8	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	27	junction_6	115.458624093443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGTACTATGACCTG	1363	False	NA	0	True	AATAAA	-31	NA	82223008	82213732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82221587_82221724_82222952
m54284U_201201_044215/23986200/ccs	chr18	-	191	1	Intergenic	novelGene_8933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTTACCAACATATCCT	NA	False	NA	NA	False	NA	NA	NA	42333407	42333216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_42333200_42333400
m54284U_201201_044215/23988256/ccs	chr17	-	2259	7	NIC	ENSMUSG00000023460.14	novel	2069	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	101.840425284963	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTTGCCGTGTGTTT	NA	False	NA	-4	True	AATAAA	-22	NA	66826724	66801506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66811983_66812174_66813027_66813089_66826342
m54284U_201201_044215/23988910/ccs	chr8	-	1527	8	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	60.6835216176382	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633351	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43618053_43618097_43633233
m54284U_201201_044215/24051820/ccs	chr2	+	2637	12	NNC	ENSMUSG00000040282.14	novel	2770	11	NA	NA	0	-182	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	114.47061046905	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCCTAAGTTACCAGT	NA	False	NA	5	True	ATTAAA	-14	NA	115412196	115609067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_115412467_115434044_115434112_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
m54284U_201201_044215/24053756/ccs	chr2	+	169	1	Intergenic	novelGene_687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGAATAATGTTCTC	NA	False	NA	NA	False	NA	NA	NA	30790421	30790590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30790400_30790600
m54284U_201201_044215/24118409/ccs	chr2	-	195	1	Intergenic	novelGene_1235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAGGCAAATGTTTCCA	7585	False	NA	NA	False	NA	NA	NA	166596109	166595914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166595900_166596100
m54284U_201201_044215/24118911/ccs	chr5	+	1696	6	NNC	ENSMUSG00000029681.13	novel	907	3	NA	NA	410	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	100.312711058968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACAGCTTCTTTCTACA	9241	False	NA	29	True	ATTAAA	-24	NA	135197708	135210709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_135197963_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
m54284U_201201_044215/24120115/ccs	chrX	+	2292	5	Intergenic	novelGene_9565	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	43	junction_1	6.49519052838329	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAGTCTCTGGTTGAAGT	9260	False	NA	25	True	AATAAA	-20	NA	100739443	100749800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100739530_100743172_100743346_100744532_100744567_100747004_100747088_100747884
m54284U_201201_044215/24120121/ccs	chr11	-	3570	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-508	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	105.114711116355	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5316	False	NA	-4	True	ATTAAA	-19	NA	60101218	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60097782_60097907_60098084_60101161
m54284U_201201_044215/24184187/ccs	chr10	+	2256	16	NIC	ENSMUSG00000032763.12	novel	2329	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	41.9345521815444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATACTGGTTTATT	5375	False	NA	30	True	AATAAA	-39	NA	78410309	78420336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_78410403_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
m54284U_201201_044215/24184221/ccs	chr16	-	3597	10	NNC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	309	junction_2	767.684686429121	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACATAATGAATACGTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	22084676	22063298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_22065617_22065939_22066011_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077735_22078012_22084490
m54284U_201201_044215/24184755/ccs	chr11	-	165	1	Intergenic	novelGene_5956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACAACAAAGACCCTAG	NA	False	NA	NA	False	NA	NA	NA	70137605	70137440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_70137400_70137600
m54284U_201201_044215/24185248/ccs	chr19	-	2675	19	NNC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_15	254.515662037176	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978275	4957258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973316_4973351_4973711_4973802_4976812_4977088_4978247
m54284U_201201_044215/24249434/ccs	chr16	-	123	1	Intergenic	novelGene_8218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAACCAGCATGTAAA	8248	False	NA	NA	False	NA	NA	NA	32422849	32422726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32422700_32422800
m54284U_201201_044215/24249791/ccs	chr9	+	1156	10	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	249.047568464389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTCTTGTGTCTGTC	2377	False	NA	42	True	TATAAA	-28	NA	21323140	21331570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21323242_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
m54284U_201201_044215/24251018/ccs	chr4	-	251	1	Intergenic	novelGene_2256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATAAAAGAGTGCTTAT	8512	False	NA	NA	False	NA	NA	NA	136044867	136044616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_136044600_136044900
m54284U_201201_044215/2426318/ccs	chr5	-	169	1	Intergenic	novelGene_2831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTTAACGTGAAACTTGA	NA	False	NA	NA	False	NA	NA	NA	118628351	118628182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_118628200_118628400
m54284U_201201_044215/24316398/ccs	chr5	-	190	1	Intergenic	novelGene_2744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAGAGTTGAAGGTCAT	NA	False	NA	NA	False	NA	NA	NA	108207579	108207389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108207400_108207600
m54284U_201201_044215/24381181/ccs	chr11	-	1442	2	Intergenic	novelGene_5971	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGATACAAACCCGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	72122988	72115367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_72116591_72122769
m54284U_201201_044215/24381539/ccs	chr1	-	2864	22	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	75	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	35.1730416248418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126882	183107681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
m54284U_201201_044215/24381835/ccs	chr5	-	3577	17	NIC	ENSMUSG00000042508.17	novel	3453	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_14	61.258640972111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211737	9168867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
m54284U_201201_044215/24445457/ccs	chr7	+	2043	8	NNC	ENSMUSG00000003184.16	novel	2031	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	54.1268351717915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647071	44651814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_44647803_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
m54284U_201201_044215/24447629/ccs	chr3	+	4041	19	NNC	ENSMUSG00000068823.11	novel	4185	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	5062.63011355428	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927922	102965502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950875_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
m54284U_201201_044215/24511159/ccs	chr1	+	2336	15	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	306	junction_3	446.071199816938	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724143	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59724386_59729644_59729722_59731495_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
m54284U_201201_044215/24576506/ccs	chr3	+	3242	13	ISM	ENSMUSG00000028101.19	ENSMUST00000162934.8	2281	14	0	-499	0	0	intron_retention	FALSE	canonical	3	24	junction_10	49.2191104484156	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGGAAGGGATGTTGT	2646	False	NA	16	True	AATAAA	-26	NA	96603757	96613289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664
m54284U_201201_044215/24576852/ccs	chr6	-	2557	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	8136	junction_3	304.686149997009	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1567	False	NA	-9	True	AATAAA	-17	NA	7693254	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
m54284U_201201_044215/24577540/ccs	chr5	+	929	4	NNC	ENSMUSG00000029723.17	novel	402	2	NA	NA	2501	197	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	175.655597374205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATATGGAGGTTGGTGTG	63	False	NA	9	True	ATTAAA	-20	NA	137746758	137758007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_137746799_137749469_137749631_137756945_137756995_137757328
m54284U_201201_044215/24642671/ccs	chr2	+	940	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	0	-4725	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_1	188.575415948103	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	360	False	NA	4	True	ATTAAA	-17	NA	112285341	112297782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_112285485_112289804_112289925_112293145_112293285_112295081_112295163_112297325
m54284U_201201_044215/24643169/ccs	chr9	-	3445	11	NIC	ENSMUSG00000090626.10	novel	2054	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	143	junction_10	32.0663374896479	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTGGTGAAATAAACAGA	7876	False	NA	-32	True	AATAAA	-14	NA	72399243	72368384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
m54284U_201201_044215/24643339/ccs	chr7	-	1359	8	NIC	ENSMUSG00000001794.14	novel	1241	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1491	junction_7	76.3271690467679	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGTAACTTGGTTATTT	NA	False	NA	-9	True	NA	NA	NA	29892397	29886367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29892018_29892291
m54284U_201201_044215/24643658/ccs	chr7	+	196	1	Intergenic	novelGene_3636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGGAAGATAAAGAAACC	4908	False	NA	NA	False	NA	NA	NA	6177452	6177648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_6177500_6177600
m54284U_201201_044215/24644333/ccs	chr3	-	2314	7	NIC	ENSMUSG00000027881.15	novel	2508	7	NA	NA	0	-443	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	165.490852382306	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTTTTGTAGGTGT	6850	False	NA	-4	True	AATAAA	-14	NA	108819043	108810905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_108812079_108812426_108812651_108813233_108813305_108815102_108815164_108815247_108815400_108815651_108815721_108818479
m54284U_201201_044215/24707347/ccs	chr1	+	857	4	NNC	ENSMUSG00000073676.5	novel	774	4	NA	NA	-153	-68	at_least_one_novel_splicesite	FALSE	canonical	2	93	junction_2	3896.25267261877	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTGTCTCTGACCTTTA	NA	False	NA	34	True	AATAAA	-22	NA	55127137	55130398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_55127572_55128209_55128375_55129873_55129962_55130228
m54284U_201201_044215/24774694/ccs	chr15	-	3982	11	NIC	ENSMUSG00000005360.15	novel	4163	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	19.3225257148231	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGTATGTTATTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	8739965	8663607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717194_8717297_8717771_8717910_8738045_8738324_8739822
m54284U_201201_044215/24839491/ccs	chr1	-	5596	22	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_7	60.2655499264423	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778397	152712745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721290_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
m54284U_201201_044215/24840241/ccs	chr5	+	176	1	Intergenic	novelGene_2911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAAAGCACAGA	6638	False	NA	NA	False	NA	NA	NA	124803011	124803187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_124803000_124803200
m54284U_201201_044215/24840540/ccs	chr18	-	188	1	Intergenic	novelGene_8955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTTTCAAAAAACTAACA	NA	False	NA	NA	False	NA	NA	NA	50060674	50060486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_50060500_50060700
m54284U_201201_044215/24904145/ccs	chr14	+	1081	3	NIC	ENSMUSG00000040640.12	novel	6233	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	11	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTATTGTCTGTTTA	2326	False	NA	15	True	ATTAAA	-12	NA	27344384	27375759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_27344572_27374643_27375441_27375662
m54284U_201201_044215/24904494/ccs	chr10	+	3012	14	NNC	ENSMUSG00000034994.11	novel	3089	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	1963.35766017686	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTCGCAACTCTGTTTT	2181	False	NA	32	True	AATAAA	-20	NA	81012464	81018332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015209_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
m54284U_201201_044215/24905029/ccs	chr5	+	4053	12	NNC	ENSMUSG00000014932.16	novel	1403	5	NA	NA	6075	0	intron_retention	FALSE	canonical	3	45	junction_1	214.878516514574	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32774753	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_32774875_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
m54284U_201201_044215/24905208/ccs	chr4	+	173	1	Intergenic	novelGene_2295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGCTACATAC	NA	False	NA	NA	False	NA	NA	NA	140465945	140466118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_140465900_140466100
m54284U_201201_044215/2492023/ccs	chr11	-	1809	14	NIC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	27	junction_12	269.691737241048	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687229	120680026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685805_120686302_120686550_120687044
m54284U_201201_044215/2492707/ccs	chr5	+	2010	15	NNC	ENSMUSG00000028954.12	novel	3269	15	NA	NA	0	-1166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	184.10749965325	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTTGAATGCTTCTTT	NA	False	NA	17	True	TATAAA	-13	NA	24890984	24914208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_24891093_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
m54284U_201201_044215/2493091/ccs	chr9	-	3187	6	NIC	ENSMUSG00000040722.8	novel	1025	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_5	39.9669863762581	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375343	57348609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57351148_57352654_57352773_57353354_57353457_57358638_57358768_57359262_57359318_57375098
m54284U_201201_044215/2493242/ccs	chr11	-	1212	8	NIC	ENSMUSG00000042709.16	novel	1849	8	NA	NA	0	-402	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	105.029830553622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAAGCCTCATTTTTATT	NA	False	NA	NA	False	ATTAAA	-22	NA	60307925	60291865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307811
m54284U_201201_044215/24969638/ccs	chrX	+	3670	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3075	junction_4	323.408238746153	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100489835_100491199
m54284U_201201_044215/24970354/ccs	chr7	-	2346	8	ISM	ENSMUSG00000060601.14	ENSMUST00000123358.9	1853	9	-40	-353	0	0	intron_retention	FALSE	canonical	3	439	junction_7	73.4824704905038	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAGTACAAGCCATTCC	NA	False	NA	-16	True	AATAAA	-15	NA	44203375	44199055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44202045_44202120_44202179_44203002
m54284U_201201_044215/25035690/ccs	chr2	-	1556	9	NNC	ENSMUSG00000027618.18	novel	2051	13	NA	NA	5502	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	81.7823903722556	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTGTCCTGATCCTTG	3228	False	NA	-13	True	AATAAA	-6	NA	155976227	155965569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976098
m54284U_201201_044215/25036943/ccs	chr6	-	209	1	Intergenic	novelGene_3500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCCTCCCCATATTTCTA	9760	False	NA	NA	False	NA	NA	NA	124808286	124808077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_124808100_124808300
m54284U_201201_044215/25101570/ccs	chr8	-	1611	5	NNC	ENSMUSG00000056204.9	novel	4883	5	NA	NA	0	296	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	80.0199193951106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGAGGGTATTTGTTGT	NA	False	NA	-13	True	NA	NA	NA	71113038	71102531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112734
m54284U_201201_044215/25102911/ccs	chr2	+	1101	1	FSM	ENSMUSG00000062846.8	ENSMUST00000121302.2	477	1	-84	-540	-84	540	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGAACAAATGAGTGT	5914	False	NA	NA	False	AATAAA	-42	NA	157743371	157744472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_157743400_157744500
m54284U_201201_044215/25167691/ccs	chr4	+	3851	12	NIC	ENSMUSG00000042388.15	novel	3884	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_10	47.2956238256549	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATCTCTCCAGAAGAG	NA	False	NA	17	True	AATAAA	-20	NA	127062996	127130815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_127063159_127086867_127086951_127088354_127089507_127093465_127093672_127094056_127094130_127108098_127108313_127108475_127108790_127109090_127109177_127127327_127127813_127128760_127128853_127129210_127129322_127129942
m54284U_201201_044215/25297144/ccs	chr15	-	200	1	Intergenic	novelGene_7917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATCCAAGAATCCTGGGA	NA	False	NA	NA	False	NA	NA	NA	95911349	95911149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_95911100_95911300
m54284U_201201_044215/25298711/ccs	chr7	-	184	1	Intergenic	novelGene_3800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCCTGGCTTATGACA	NA	False	NA	NA	False	NA	NA	NA	39176852	39176668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_39176700_39176900
m54284U_201201_044215/25363409/ccs	chr17	-	4254	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	339	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	189.13788327273	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46341943	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46340061
m54284U_201201_044215/25363516/ccs	chr1	+	2316	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	14.0996453856117	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170324	183191020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
m54284U_201201_044215/25364771/ccs	chr8	-	2370	5	Intergenic	novelGene_4401	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_1	27.8511669414407	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAAATAAACCC	NA	False	NA	NA	False	NA	NA	NA	89779653	89772282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_89774095_89774349_89774422_89775330_89775532_89776215_89776356_89779508
m54284U_201201_044215/25365329/ccs	chr10	-	1588	3	NNC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-92	405	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	237	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACGAAAAAAGAACCATC	NA	False	NA	NA	False	NA	NA	NA	95253134	95247876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95248973_95250692_95251054_95253003
m54284U_201201_044215/25428124/ccs	chr5	+	237	1	Intergenic	novelGene_2462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTATTAAAATCTTTCTA	NA	False	NA	NA	False	AAAAAG	-25	NA	11074540	11074777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_11074500_11074800
m54284U_201201_044215/25429009/ccs	chr10	-	194	1	Intergenic	novelGene_5554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTGGTCTTGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	117266984	117266790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_117266800_117267000
m54284U_201201_044215/25429763/ccs	chr18	+	3013	12	NIC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	315	junction_6	28.9099485293029	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGCCCTTGAGTGTG	3975	False	NA	20	True	AATAAA	-21	NA	38383319	38395682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
m54284U_201201_044215/25494998/ccs	chr11	-	3696	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-508	combination_of_known_junctions	FALSE	canonical	3	238	junction_18	63.0911793643156	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5316	False	NA	-4	True	ATTAAA	-19	NA	60101218	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
m54284U_201201_044215/25495006/ccs	chr3	-	1119	7	NIC	ENSMUSG00000004038.10	novel	1311	8	NA	NA	110	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_4	86.6033422501054	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTTTTTCTTTTGC	NA	False	NA	0	True	AATAAA	-20	NA	107876489	107871011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_107871613_107873402_107873514_107873594_107873691_107874890_107874992_107875451_107875517_107876078_107876155_107876420
m54284U_201201_044215/25496072/ccs	chr8	-	1021	5	NNC	ENSMUSG00000035559.10	novel	980	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_3	276.99311814556	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	-2	True	ATTAAA	-17	NA	71213592	71211294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_71211671_71211754_71211884_71212036_71212155_71213013_71213185_71213365
m54284U_201201_044215/25559384/ccs	chr8	-	151	1	Intergenic	novelGene_4339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCGAAGTGTGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	73197083	73196932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_73196900_73197100
m54284U_201201_044215/25560655/ccs	chr5	+	4167	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	58.4990588520743	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	893	False	NA	4	True	TTTAAA	-7	NA	121849922	121953013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
m54284U_201201_044215/2557132/ccs	chr6	-	1730	6	NIC	ENSMUSG00000030057.16	novel	952	6	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	5035.70247731138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGACAGTTTGGACTT	NA	False	NA	-9	True	ATTAAA	-21	NA	87828012	87820063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87825996_87826092_87827885
m54284U_201201_044215/25624586/ccs	chr13	+	1189	9	NNC	ENSMUSG00000021548.11	novel	2045	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	50	junction_8	307.439323281847	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTGATTGTTTTA	NA	False	NA	15	True	ATTAAA	-22	NA	85337566	85361029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360861
m54284U_201201_044215/25624956/ccs	chr16	+	2530	17	NIC	ENSMUSG00000093575.2	novel	1012	9	NA	NA	0	21630	combination_of_known_splicesites	FALSE	canonical	1	11	junction_6	42.0891446070124	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGCTGCTATTATTAT	NA	False	NA	7	True	AATACA	-17	NA	3702511	3759011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
m54284U_201201_044215/25625994/ccs	chr7	-	3974	25	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_23	85.3856346068952	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4662018	4634493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4654818_4654931_4661479
m54284U_201201_044215/25690246/ccs	chr1	+	2455	4	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	1082.78232140886	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160865843_160866026
m54284U_201201_044215/25690767/ccs	chr17	+	3154	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	53	-1239	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	15.992498241363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTTCTTACCTACAC	NA	False	NA	NA	False	AATAAA	-25	NA	73415041	73549124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_73415152_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
m54284U_201201_044215/25692126/ccs	chr3	-	191	1	Intergenic	novelGene_1461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGGTCTGGAGAGATG	NA	False	NA	NA	False	NA	NA	NA	86128890	86128699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_86128700_86128900
m54284U_201201_044215/25756226/ccs	chr16	+	2564	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	113.988912716203	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17577526	17611246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_17577559_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
m54284U_201201_044215/25757671/ccs	chr2	-	190	1	Intergenic	novelGene_1245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGCAAAGGCAGGGTAAT	NA	False	NA	NA	False	NA	NA	NA	166853437	166853247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166853200_166853400
m54284U_201201_044215/25821666/ccs	chr1	+	225	1	Intergenic	novelGene_547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATACATAGCAATTAAG	NA	False	NA	NA	False	AATAAA	-6	NA	190756225	190756450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_190756200_190756400
m54284U_201201_044215/25821736/ccs	chr4	-	3665	21	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_20	86.4360312601174	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7420	False	NA	-6	True	TATAAA	-12	NA	155753655	155739139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
m54284U_201201_044215/25887306/ccs	chr18	+	4442	4	NNC	ENSMUSG00000025880.12	novel	4278	4	NA	NA	-167	0	intron_retention	FALSE	canonical	3	84	junction_2	775.23673803555	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGTTGTTCAGAGCTT	NA	False	NA	19	True	ATTAAA	-24	NA	75500432	75529006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_75502640_75503965_75504020_75508947_75509020_75526897
m54284U_201201_044215/25888233/ccs	chr18	+	1620	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	0	1931	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	389.0304536634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422255	67451910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
m54284U_201201_044215/25889074/ccs	chr18	+	3535	14	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-69	1403	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	52.5754459305187	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCTCAGTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	75151782	75285502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75283751
m54284U_201201_044215/25953423/ccs	chr2	+	1989	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_2	65.9963685452239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367171	180384073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_180367245_180373672_180373801_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
m54284U_201201_044215/26020525/ccs	chrX	-	3320	6	ISM	ENSMUSG00000025269.17	ENSMUST00000112725.8	3613	7	1695	81	0	-81	3prime_fragment	FALSE	canonical	3	13	junction_1	30.3539124331609	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTTCTATAATTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	149371145	149302595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_-_149305207_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
m54284U_201201_044215/26083556/ccs	chr12	-	1571	6	NNC	ENSMUSG00000076432.14	novel	2197	6	NA	NA	-70	-344	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_5	1362.85039531124	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCGTAGCTCTGGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	21467507	21440676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467394
m54284U_201201_044215/26083877/ccs	chr7	-	3030	22	NNC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	60.1627045636095	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9941	False	NA	-3	True	AATAAA	-17	NA	4504679	4484518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489309_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
m54284U_201201_044215/26085054/ccs	chr15	+	3259	9	NIC	ENSMUSG00000072501.6	novel	3263	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	18.1916876622264	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGCTCTAATTACTTT	3830	False	NA	NA	False	AATAAA	-16	NA	66449408	66483465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374
m54284U_201201_044215/26085964/ccs	chr16	-	2407	10	NIC	ENSMUSG00000022858.17	novel	1687	10	NA	NA	0	585	combination_of_known_junctions	FALSE	canonical	3	119	junction_8	731.055553444622	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTGTTGGTTTTCTTTTT	NA	False	NA	-20	True	AATAAA	-38	NA	22084676	22064612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22077614_22078012_22084490
m54284U_201201_044215/26216509/ccs	chrX	-	3658	21	NIC	ENSMUSG00000025059.17	novel	4229	20	NA	NA	0	-658	combination_of_known_junctions	FALSE	canonical	3	6	junction_17	45.7159436083299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTCTCATTTCCAG	NA	False	NA	-5	True	AATAAA	-19	NA	84820230	84746200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84793217_84793302_84797937_84798016_84804180_84804288_84804939_84805014_84820031
m54284U_201201_044215/26216563/ccs	chr17	-	2424	6	NIC	ENSMUSG00000015605.7	novel	2616	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	30.5587957877924	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAACTTTTTTTTAATGGC	NA	False	NA	-5	True	TATAAA	-18	NA	46867101	46859254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46860105_46860361_46860439_46861826_46861947_46862456_46862719_46864485_46864753_46866253
m54284U_201201_044215/26217183/ccs	chr7	-	1911	7	NIC	ENSMUSG00000008140.19	novel	1662	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	278	junction_1	282.765509447905	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTGCCTTCTGTGCTTG	NA	False	NA	-1	True	ATTAAA	-31	NA	44145887	44139534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
m54284U_201201_044215/2621962/ccs	chr16	+	1805	10	NIC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	-136	combination_of_known_splicesites	FALSE	canonical	2	35	junction_8	1076.27061859202	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGGGCCCGCAGAG	1394	False	NA	NA	False	AATAAA	-26	NA	20354268	20362670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20361388_20361501_20362060
m54284U_201201_044215/2622167/ccs	chr7	-	196	1	Intergenic	novelGene_3970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTACAGACAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	99196637	99196441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_99196400_99196600
m54284U_201201_044215/2622965/ccs	chr1	-	185	1	Intergenic	novelGene_128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGAAAGGAAGGTGGGA	NA	False	NA	NA	False	NA	NA	NA	55624225	55624040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_55624000_55624200
m54284U_201201_044215/26280467/ccs	chr15	-	3571	4	ISM	ENSMUSG00000060429.13	ENSMUST00000039769.13	4919	7	230503	0	229864	0	3prime_fragment	FALSE	canonical	3	32	junction_1	5.31245915016974	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTAGGCTTATAATTTTA	NA	False	NA	2	True	AATAAA	-21	NA	55539842	55499783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699
m54284U_201201_044215/26281230/ccs	chr3	+	2446	10	NIC	ENSMUSG00000027794.5	novel	2364	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	238	junction_7	30.4010233745876	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGCAAGGAATCTGAT	NA	False	NA	20	True	AATAAA	-22	NA	55089448	55117378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_55089536_55096541_55096757_55097730_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
m54284U_201201_044215/26345512/ccs	chr11	-	150	1	Intergenic	novelGene_6295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATTTAAAGGGGC	NA	False	NA	NA	False	NA	NA	NA	98053590	98053440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_98053400_98053600
m54284U_201201_044215/26345830/ccs	chr5	+	3741	13	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_1	52.5071423713003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111015960_111019892_111019974_111021345
m54284U_201201_044215/263942/ccs	chr14	+	2264	15	NNC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_7	206.898131298216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045381	51058758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054650_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
m54284U_201201_044215/26411642/ccs	chr18	-	177	1	Intergenic	novelGene_9054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	82893659	82893482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_82893500_82893700
m54284U_201201_044215/26413213/ccs	chr9	+	3959	8	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_2	34.0665614972351	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
m54284U_201201_044215/264300/ccs	chrX	-	5112	30	ISM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	63	4380	63	0	5prime_fragment	FALSE	canonical	3	55	junction_6	16.6138203002884	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATCGCTGCTTTTTGGG	NA	False	NA	-4	True	AATAAA	-13	NA	12628249	12545987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
m54284U_201201_044215/264460/ccs	chr9	+	2686	8	NIC	ENSMUSG00000042787.16	novel	2624	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_2	21.0092302358283	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGCCTGACTGCATATTT	NA	False	NA	NA	False	AAAAAG	-4	NA	119274025	119293305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_119274217_119274352_119274388_119274753_119274868_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
m54284U_201201_044215/26476601/ccs	chr11	-	1915	9	NIC	ENSMUSG00000041346.12	novel	1891	10	NA	NA	86	0	intron_retention	FALSE	canonical	3	103	junction_5	30.2321745000256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTCATTGTGTCTGTT	NA	False	NA	-4	True	TATAAA	-15	NA	69470064	69452584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
m54284U_201201_044215/26476971/ccs	chr4	+	5337	22	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_8	114.255134797804	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/26542287/ccs	chr2	-	1542	9	NIC	ENSMUSG00000027361.16	novel	1338	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	161.744976738074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTGAATGAGTGCAGA	NA	False	NA	-17	True	NA	NA	NA	126517512	126480940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126504910_126505009_126517275
m54284U_201201_044215/26543240/ccs	chr11	-	180	1	Intergenic	novelGene_6315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAGATAGATAAA	2909	False	NA	NA	False	NA	NA	NA	99142177	99141997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_99142000_99142200
m54284U_201201_044215/26544281/ccs	chr16	-	180	1	Intergenic	novelGene_8185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACAGTGAGCGTGGGACT	NA	False	NA	NA	False	NA	NA	NA	30345678	30345498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_30345500_30345700
m54284U_201201_044215/26544654/ccs	chr10	+	184	1	Intergenic	novelGene_5398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTCCTGGATTCTGC	NA	False	NA	NA	False	NA	NA	NA	71257797	71257981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_71257800_71258000
m54284U_201201_044215/26607634/ccs	chr8	+	193	1	Intergenic	novelGene_4229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGACAAGACAGTATG	NA	False	NA	NA	False	NA	NA	NA	23689224	23689417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_23689200_23689400
m54284U_201201_044215/26607943/ccs	chr14	+	6608	19	NIC	ENSMUSG00000007817.16	novel	359	3	NA	NA	0	-141	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	15.4092324417683	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTAGGTGTTCATGTGGTT	6	True	NA	13	True	AATAAA	-24	NA	25607780	25667026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_25607895_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
m54284U_201201_044215/26608761/ccs	chr13	-	4146	12	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	-86	intron_retention	FALSE	canonical	3	2035	junction_5	136.524632233936	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334865	97312924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
m54284U_201201_044215/26609070/ccs	chr18	-	171	1	Intergenic	novelGene_8961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTAGGCTCTACTCT	NA	False	NA	NA	False	NA	NA	NA	53987515	53987344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_53987300_53987500
m54284U_201201_044215/26610423/ccs	chr16	-	6745	28	NIC	ENSMUSG00000022973.19	novel	6910	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	10.2247715554318	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCTGACTTCTTTACTC	2396	False	NA	-20	True	AATAAA	-13	NA	90808001	90732988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90770797_90770964_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
m54284U_201201_044215/26673442/ccs	chr10	+	2147	12	NIC	ENSMUSG00000025359.11	novel	2130	11	NA	NA	0	-110	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	18.002295537739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCTTTTGTTGCTGTTCG	NA	False	NA	8	True	AATAAA	-19	NA	128541048	128555997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128541154_128542104_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768_128554857_128555753
m54284U_201201_044215/26674205/ccs	chr3	-	189	1	Intergenic	novelGene_1586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	255	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTAAGCCTTTTTAGT	NA	False	NA	-16	True	NA	NA	NA	96442614	96442425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_96442400_96442600
m54284U_201201_044215/26675913/ccs	chr11	+	3595	25	NIC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_23	26.6291076643586	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3496	False	NA	14	True	AATAAA	-22	NA	85244010	85716884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85712847_85712939_85716027
m54284U_201201_044215/26738710/ccs	chr4	-	1824	8	NIC	ENSMUSG00000029022.19	novel	1909	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_4	85.7195236494807	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952980	147945247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947407_147949645_147949728_147950111_147950472_147950691_147950877_147952825
m54284U_201201_044215/26740629/ccs	chr4	+	215	1	Intergenic	novelGene_2169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATAGCTCTTTACGTTTT	NA	False	NA	NA	False	NA	NA	NA	130259270	130259485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_130259300_130259500
m54284U_201201_044215/26740901/ccs	chr11	-	170	1	Intergenic	novelGene_6000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	75098060	75097890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75097900_75098100
m54284U_201201_044215/26805164/ccs	chr4	-	176	1	Intergenic	novelGene_2040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCGGATAC	NA	False	NA	NA	False	NA	NA	NA	117014536	117014360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_117014400_117014500
m54284U_201201_044215/26805713/ccs	chr17	-	2049	1	Antisense	novelGene_ENSMUSG00000023067.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGCCCTG	NA	False	NA	NA	False	NA	NA	NA	29318922	29316873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_29316900_29318900
m54284U_201201_044215/26805886/ccs	chr4	+	7788	23	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_19	29.5377962102571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150366045	150706423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
m54284U_201201_044215/2686987/ccs	chr4	-	3821	1	Intergenic	novelGene_2067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	119787498	119783677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_119783700_119787500
m54284U_201201_044215/26870331/ccs	chr9	-	1916	4	NNC	ENSMUSG00000032224.16	novel	478	3	NA	NA	108	2242	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	110.563204648844	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAAGGATGCTTTGC	NA	False	NA	NA	False	NA	NA	NA	70048752	70030004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_70031392_70032205_70032480_70033468_70033566_70048594
m54284U_201201_044215/2687035/ccs	chr8	-	3498	12	NIC	ENSMUSG00000036180.16	novel	3622	13	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	348.613831202643	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70448984	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
m54284U_201201_044215/26871118/ccs	chr8	+	1465	3	NIC	ENSMUSG00000005470.9	novel	1788	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	267	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGCTTTTTTCTCTC	5923	False	NA	23	True	AATAAA	-16	NA	84682342	84696826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84682567_84694462_84694640_84695762
m54284U_201201_044215/2688186/ccs	chr17	-	3797	8	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	17.3075422983208	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533818	22504851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528185_22528296_22528485_22528579_22531009_22531223_22532217_22532302_22533727
m54284U_201201_044215/2688779/ccs	chr13	+	192	1	Intergenic	novelGene_7288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGTTGCTGCATTTAAA	NA	False	NA	NA	False	NA	NA	NA	105037978	105038170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_105038000_105038200
m54284U_201201_044215/26936907/ccs	chr15	-	184	1	Intergenic	novelGene_7933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAAAACGGCAC	1769	False	NA	NA	False	NA	NA	NA	97768452	97768268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_97768300_97768500
m54284U_201201_044215/26938181/ccs	chr1	-	1008	5	NIC	ENSMUSG00000058076.13	novel	3171	6	NA	NA	0	243	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	373.85324660888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGACTCTTTGGAATCT	456	False	NA	-6	True	ATTAAA	-16	NA	170978172	170956732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_170957475_170966262_170966325_170971126_170971229_170973324_170973382_170978127
m54284U_201201_044215/27001437/ccs	chr19	-	2086	9	NNC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	2	89	junction_1	1058.79500347093	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	15902349	15882493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_15883511_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
m54284U_201201_044215/27001616/ccs	chr4	+	421	4	Antisense	novelGene_ENSMUSG00000042367.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_3	31.7104959840674	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTGTGTTTGTGTGT	9270	False	NA	NA	False	AATAAA	-21	NA	127224031	127232837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_+_127224096_127225680_127225785_127226134_127226258_127232707
m54284U_201201_044215/27067490/ccs	chr2	+	119	1	Intergenic	novelGene_781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATTGAAGAAGATC	NA	False	NA	NA	False	ATTAAA	-31	NA	40447338	40447457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_40447300_40447500
m54284U_201201_044215/27132805/ccs	chr2	+	5690	25	NIC	ENSMUSG00000027111.17	novel	4156	26	NA	NA	0	-186	intron_retention	FALSE	canonical	3	444	junction_20	38.1094686032516	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTTGTTAACACAGCATC	NA	False	NA	32	True	AATAAA	-20	NA	71617283	71688574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71686197
m54284U_201201_044215/27133724/ccs	chr7	+	1460	5	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	431	junction_1	30.364452901378	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008201	30013729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30012133_30013343
m54284U_201201_044215/27134482/ccs	chr19	-	584	3	NNC	ENSMUSG00000061132.14	novel	1701	17	NA	NA	58684	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTGATGCATTTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	40923907	40917370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_40917737_40922870_40923027_40923845
m54284U_201201_044215/27265829/ccs	chr8	+	3417	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2092	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	768.623438967161	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760547	111782204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_111760577_111760803_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
m54284U_201201_044215/27329409/ccs	chr8	+	3828	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	87	junction_12	60.2107410129898	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9251	False	NA	NA	False	AATAAA	-23	NA	70243899	70260399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
m54284U_201201_044215/27394427/ccs	chr2	-	3326	28	NIC	ENSMUSG00000038860.16	novel	3551	30	NA	NA	0	-3892	combination_of_known_junctions	FALSE	canonical	3	63	junction_9	18.5239251366749	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGACATCTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	33020620	32880277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33020435
m54284U_201201_044215/27394644/ccs	chr15	-	1869	10	NIC	ENSMUSG00000023021.16	novel	2096	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_2	75.4335616434901	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTCTGTCTCTTTAGTA	NA	False	NA	-3	True	ATTAAA	-15	NA	99670346	99633472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_99634318_99636545_99636612_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
m54284U_201201_044215/27395085/ccs	chr5	+	3305	18	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_1	58.4142230393181	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952091	86984518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_86952451_86957163_86957200_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
m54284U_201201_044215/27396395/ccs	chr15	-	3718	17	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	0	287	intron_retention	FALSE	canonical	3	2899	junction_8	224.695488383723	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGGAGAAAACAGAGTT	NA	False	NA	-21	True	AATAAA	-16	NA	11399687	11383803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
m54284U_201201_044215/27460359/ccs	chr2	+	2875	17	NNC	ENSMUSG00000039849.7	novel	5780	17	NA	NA	0	-3077	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	44.7995535692042	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGAGGGTCTTGGGGC	5949	False	NA	17	True	AATACA	-15	NA	164721276	164733297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_164721582_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
m54284U_201201_044215/27525485/ccs	chr4	+	2248	10	NNC	ENSMUSG00000028696.13	novel	2118	9	NA	NA	77	3165	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	22.8958996814325	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTTCTTGAGGG	NA	False	NA	NA	False	AATAAA	-10	NA	116364825	116398605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996_116395118_116398080
m54284U_201201_044215/2752562/ccs	chr10	+	2838	10	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-136	0	intron_retention	FALSE	canonical	3	656	junction_3	40.4294844126974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTGGGCTTTACCA	NA	False	NA	17	True	GGGGCT	-44	NA	80458535	80476583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475498_80475601_80475709_80475855
m54284U_201201_044215/2753079/ccs	chr19	-	2621	3	NIC	ENSMUSG00000040414.9	novel	1535	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	293	junction_1	1	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTGTTGGGTTTGTCTT	NA	False	NA	-3	True	ATTAAA	-19	NA	43663320	43652239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_43653083_43654210_43655583_43662914
m54284U_201201_044215/2753644/ccs	chr11	+	1985	9	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-4334	combination_of_known_splicesites	FALSE	canonical	2	481	junction_8	2211.58833971763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCAAAGTATGTGGGG	NA	False	NA	31	True	AATAAA	-18	NA	55360543	55391330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55390284
m54284U_201201_044215/2753864/ccs	chr4	+	3587	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	306	junction_10	51.2387548638723	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585_21874673_21874912
m54284U_201201_044215/2755156/ccs	chr10	-	4594	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	315	junction_12	36.5310923742936	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
m54284U_201201_044215/2755185/ccs	chr3	+	2670	15	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	218.87723704844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_157742514_157746077_157746260_157747256_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201201_044215/27590896/ccs	chr10	+	5856	9	NNC	ENSMUSG00000040195.12	novel	6002	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	43.8461443572864	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGTCTTTTTAAATTAA	NA	False	NA	16	True	AATAAA	-16	NA	127512934	127536918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127513097_127524101_127524218_127525093_127525168_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
m54284U_201201_044215/27591180/ccs	chr11	-	1625	2	Intergenic	novelGene_5896	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCAGTTTCATCGCTTCT	8080	False	NA	NA	False	NA	NA	NA	61288491	61281954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_61283397_61288308
m54284U_201201_044215/27591240/ccs	chr2	+	192	1	Intergenic	novelGene_1066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTTCAGTTCTGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	129030868	129031060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_129030900_129031100
m54284U_201201_044215/27593483/ccs	chr7	-	1326	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	0	-614	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_8	608.651778650421	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGGGTTTTTCTTTGTC	NA	False	NA	-11	True	AATAAA	-16	NA	59654859	59632863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649050_59649162_59654783
m54284U_201201_044215/27656405/ccs	chr12	+	1612	5	NIC	ENSMUSG00000071379.3	novel	1526	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	31.8541598539343	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGAGTTTCCTGTGT	8624	False	NA	17	True	AATAAA	-5	NA	17740856	17841934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_17741048_17817214_17817301_17836147_17836550_17837545_17837652_17841107
m54284U_201201_044215/27657661/ccs	chr1	-	195	1	ISM	ENSMUSG00000085184.10	ENSMUST00000132370.9	599	3	12342	0	12342	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACAATAAGCACCTTTGC	NA	False	NA	NA	False	NA	NA	NA	172365894	172365699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_172365700_172365900
m54284U_201201_044215/27657673/ccs	chr4	+	3350	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_7	131.481511077041	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096259	154105970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104449_154104494
m54284U_201201_044215/27657740/ccs	chr7	+	1964	10	NIC	ENSMUSG00000025495.16	novel	3624	12	NA	NA	0	553	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	99.4836049523789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCCTCTGGCTGCCCTTT	6868	False	NA	12	True	AATAAA	-17	NA	140711256	140736068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140711431_140715221_140715324_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
m54284U_201201_044215/27658530/ccs	chr15	-	4329	33	NIC	ENSMUSG00000022607.19	novel	4417	32	NA	NA	0	-231	combination_of_known_junctions	FALSE	canonical	3	22	junction_30	49.759882419852	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACTGGAGCTAACTGAC	1656	False	NA	-10	True	ATTAAA	-18	NA	73295061	73077181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73263607_73263730_73266496_73266594_73294857
m54284U_201201_044215/27658558/ccs	chr19	-	2392	18	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_17	91.7598792094124	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCTTTTTTTTTTCC	1626	False	NA	0	True	AATAAA	-21	NA	6014230	5990569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
m54284U_201201_044215/27722087/ccs	chr6	+	208	1	Intergenic	novelGene_3297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTAGTATTATTAAATAT	NA	False	NA	NA	False	NA	NA	NA	64524973	64525181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_64525000_64525200
m54284U_201201_044215/27723736/ccs	chr19	-	1470	10	NNC	ENSMUSG00000010095.14	novel	2813	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	1272.25510874525	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACCCCTGCCTCATGA	NA	False	NA	12	True	AATAAA	-2	NA	8690720	8684950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8687338_8687483_8689197_8689293_8690093_8690268_8690705
m54284U_201201_044215/27724126/ccs	chr16	+	1865	11	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_10	666.107979234598	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
m54284U_201201_044215/27787530/ccs	chr10	+	2720	8	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	576.708322981313	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516108	61529076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_61516193_61519839_61519967_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
m54284U_201201_044215/27853024/ccs	chr6	-	660	3	Intergenic	novelGene_3260	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCAGCTTGTGTGCATT	NA	False	NA	NA	False	AGTAAA	-17	NA	48999402	48995451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_48995945_48997387_48997456_48999303
m54284U_201201_044215/27853540/ccs	chr11	+	3085	14	NNC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	178	intron_retention	FALSE	canonical	3	13	junction_3	62.9666014598873	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCCCTTCATTTAA	NA	False	NA	11	True	NA	NA	NA	29476407	29495457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_29476844_29479928_29480155_29480580_29480779_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
m54284U_201201_044215/27854790/ccs	chr12	+	5770	25	NIC	ENSMUSG00000034574.11	novel	5835	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	18.350560088334	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTTTCTATGCATTA	1841	False	NA	22	True	AATAAA	-22	NA	71877889	72039107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
m54284U_201201_044215/27855199/ccs	chr16	-	2982	11	NIC	ENSMUSG00000022498.17	novel	3095	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	28.318898283655	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGAATGTCATTTAGCATT	8534	False	NA	NA	False	AATAAA	-29	NA	10952514	10892774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
m54284U_201201_044215/27919556/ccs	chr9	-	4816	14	NNC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	92.264348798285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTTGTGTTTCATAA	2246	False	NA	-19	True	AATAAA	-15	NA	70411007	70332711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349707_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
m54284U_201201_044215/27920728/ccs	chr3	+	1505	16	NNC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	105.267194425529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTTACCTGAGATA	NA	False	NA	NA	False	AATAAA	-15	NA	95466988	95494907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_95467035_95467121_95467247_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
m54284U_201201_044215/27984725/ccs	chr18	-	184	1	Intergenic	novelGene_8847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACATGGAGAGATAAAA	NA	False	NA	NA	False	NA	NA	NA	27809213	27809029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_27809000_27809200
m54284U_201201_044215/27984914/ccs	chr1	-	6907	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-266	443	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	42.7327613066238	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30913268	30842183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902337_30913160
m54284U_201201_044215/28049723/ccs	chr15	-	3273	7	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	16287	junction_6	5523.20271420688	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79964754_79965096_79965985_79966590_79966784_79967524
m54284U_201201_044215/28049756/ccs	chr3	+	6460	38	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	-67	combination_of_known_splicesites	FALSE	canonical	3	35	junction_35	19.4597597574427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATGTATACTCTTAT	6168	False	NA	-56	True	NA	NA	NA	87524881	87645273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
m54284U_201201_044215/28116431/ccs	chr5	+	3507	4	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1139	junction_3	36.7362975210561	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276360	28283660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_28276794_28278544_28279647_28280059_28280160_28281788
m54284U_201201_044215/2819155/ccs	chr11	-	1630	6	NIC	ENSMUSG00000056962.12	novel	1668	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	113.206713581837	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734275	116728257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116728590_116729815_116729955_116731273_116731372_116731894_116732182_116733157_116733547_116733890
m54284U_201201_044215/28248680/ccs	chr4	+	3783	19	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	19.9109126974241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTAGCATCTGCTTC	378	False	NA	14	True	TTTAAA	-18	NA	140966890	140984875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973256_140973364_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
m54284U_201201_044215/28311727/ccs	chr6	+	2296	17	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	181.494049058778	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	8	True	NA	NA	NA	40302420	40373696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40331947_40332028_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
m54284U_201201_044215/28312926/ccs	chr12	+	431	3	ISM	ENSMUSG00000056899.11	ENSMUST00000134965.8	977	6	601219	0	557236	0	3prime_fragment	FALSE	canonical	3	213	junction_2	12	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTGTGTTGTATT	NA	False	NA	NA	False	ATTAAA	-15	NA	41675546	42002025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_41675613_41750437_41750541_42001763
m54284U_201201_044215/28313047/ccs	chr11	-	3895	14	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	163.712296350431	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120041805
m54284U_201201_044215/28314163/ccs	chr2	-	1428	9	NIC	ENSMUSG00000026766.17	novel	1351	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	256.06270594329	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGTTTTTTATTGCA	NA	False	NA	0	True	AATAAA	-20	NA	50186729	50169892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_50170415_50170584_50170671_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
m54284U_201201_044215/28314236/ccs	chr4	-	1219	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_6	303.134000439116	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033744	123020907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030633_123030692_123031318_123031363_123032658_123032758_123033694
m54284U_201201_044215/28378476/ccs	chr11	-	1093	5	NIC	ENSMUSG00000025574.14	novel	1440	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_2	509.684399898604	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTGTTTCTCCTTAGCC	NA	False	NA	-17	True	ATTAAA	-16	NA	117716693	117706351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_117706966_117707272_117707393_117712922_117713017_117715496_117715608_117716539
m54284U_201201_044215/28378995/ccs	chr12	-	191	1	Intergenic	novelGene_6777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGAAATATGGGTT	NA	False	NA	NA	False	NA	NA	NA	82203590	82203399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_82203400_82203600
m54284U_201201_044215/28445252/ccs	chr2	+	183	1	Intergenic	novelGene_711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGAGCTCAGAGGCAG	5579	False	NA	NA	False	NA	NA	NA	31971262	31971445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_31971300_31971400
m54284U_201201_044215/28508167/ccs	chr5	+	1179	3	Intergenic	novelGene_2768	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	4	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGAGAGACAAGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	110615122	110625311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110615829_110622235_110622403_110625005
m54284U_201201_044215/28509459/ccs	chr7	-	1908	11	NIC	ENSMUSG00000030619.11	novel	2067	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_10	722.358671298407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAACTCTAGAAAGCT	NA	False	NA	-8	True	AATAAA	-27	NA	89630191	89603867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89629619
m54284U_201201_044215/28510024/ccs	chr18	+	3955	21	NIC	ENSMUSG00000024260.15	novel	400	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	41.2439086411557	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	7519	False	NA	8	True	AATAAA	-20	NA	31768137	31856114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_31768185_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
m54284U_201201_044215/28575370/ccs	chr8	+	2825	16	NIC	ENSMUSG00000036564.18	novel	713	11	NA	NA	-279	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	8.44169545898347	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTACGTGTGTCGTGTTTCC	NA	False	NA	5	True	AATAAA	-10	NA	96404433	96441580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_96404500_96423821_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
m54284U_201201_044215/28639403/ccs	chr16	-	3712	23	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	35.4245794110005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	False	NA	1	True	AATAAA	-28	NA	10994206	10954455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
m54284U_201201_044215/28772310/ccs	chr2	-	2515	16	NNC	ENSMUSG00000027244.15	novel	3551	16	NA	NA	-168	650	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_15	65.7894283976452	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATATTTTATAGAAGTA	NA	False	NA	-15	True	NA	NA	NA	91536247	91505977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535938
m54284U_201201_044215/28772568/ccs	chr8	-	1699	9	NIC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	0	713	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	197.424036023986	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACGTTAGAGAAGCAAAC	3861	False	NA	-8	True	AATAAA	-19	NA	95328354	95301571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124_95328213_95328309
m54284U_201201_044215/28836446/ccs	chr4	-	1868	9	NIC	ENSMUSG00000028637.17	novel	1312	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	4.28478412525065	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGTGTTAGTAATTTC	9723	False	NA	NA	False	NA	NA	NA	119272718	119209442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_119209850_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
m54284U_201201_044215/2884366/ccs	chr1	-	4409	6	NIC	ENSMUSG00000026558.14	novel	4731	7	NA	NA	-212	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	405.117563183824	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTTGTGGGTGCCTGGT	NA	False	NA	0	True	AATAAA	-32	NA	167112665	167050451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_167054091_167055300_167055350_167062260_167062404_167064171_167064269_167065057_167065218_167112344
m54284U_201201_044215/2884725/ccs	chr19	-	233	1	Intergenic	novelGene_9179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTGCCGCTGTTAGTA	NA	False	NA	NA	False	AAAAAG	-39	NA	21859203	21858970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_21859000_21859200
m54284U_201201_044215/2885795/ccs	chr14	+	192	1	Intergenic	novelGene_7399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCCCTGTTATGGACTG	NA	False	NA	NA	False	NA	NA	NA	37450172	37450364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_37450200_37450400
m54284U_201201_044215/28902121/ccs	chrX	-	164	1	Intergenic	novelGene_9478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATCTCTTGCATAAT	NA	False	NA	NA	False	NA	NA	NA	57113113	57112949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_57112900_57113100
m54284U_201201_044215/28903874/ccs	chr6	+	3896	27	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	93.7144725582122	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	524	False	NA	NA	False	ATTAAA	-16	NA	83142932	83177099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
m54284U_201201_044215/29033104/ccs	chr4	+	2125	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_3	366.739945329112	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650936	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653336_134654130_134654241
m54284U_201201_044215/29034503/ccs	chr14	-	3696	8	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	189	junction_3	22.2288652202399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063620	58044017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_58044989_58045431_58045536_58047399_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
m54284U_201201_044215/29098339/ccs	chr5	+	1088	10	NNC	ENSMUSG00000019494.15	novel	1098	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	1463.99962895496	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGCCCTTCCAGTGGC	NA	False	NA	11	True	AATAAA	-12	NA	138159361	138162240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_138159445_138159636_138159760_138159935_138160066_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
m54284U_201201_044215/29099676/ccs	chr2	-	2505	4	ISM	ENSMUSG00000026890.20	ENSMUST00000112961.10	3292	9	12637	1	2850	0	3prime_fragment	FALSE	canonical	1	1	junction_2	6.37704215656966	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCCATGGAATTCCAT	NA	False	NA	NA	False	AATAAA	-39	NA	35981435	35971965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331
m54284U_201201_044215/29100681/ccs	chr2	-	3568	21	NNC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	24	junction_18	222.579671129239	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017564	4995534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5013951_5014064_5015499_5015587_5017515
m54284U_201201_044215/29163774/ccs	chr12	-	4639	29	NIC	ENSMUSG00000021068.18	novel	6708	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_28	8.80949163443288	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGTCTTCTTTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70158751	70065513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_70066037_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
m54284U_201201_044215/29163923/ccs	chr8	-	5580	13	NIC	ENSMUSG00000004319.16	novel	4175	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	80.1138079373476	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGCTTTTAATTGCA	NA	False	NA	-1	True	ATTAAA	-18	NA	61436320	61363422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_61366210_61367786_61367863_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61383714_61383796_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61435809
m54284U_201201_044215/29229186/ccs	chr8	+	7349	42	NIC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	37.0833105517201	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725357	71813357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801546_71801578_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
m54284U_201201_044215/29229916/ccs	chr4	+	3968	4	NIC	ENSMUSG00000028527.19	novel	4186	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	134.910670033504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGATGGAATTTCATAA	NA	False	NA	19	True	AATAAA	-17	NA	101276929	101324192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_101277163_101317696_101317870_101320145_101320265_101320749
m54284U_201201_044215/29230638/ccs	chr2	-	178	1	Intergenic	novelGene_614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCC	5959	False	NA	NA	False	NA	NA	NA	19541342	19541164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_19541200_19541300
m54284U_201201_044215/29230854/ccs	chr4	+	3784	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_3	588.409437948328	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4706	False	NA	23	True	AATAAA	-28	NA	135583442	135597219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590833_135590888_135594436
m54284U_201201_044215/29231166/ccs	chr2	-	206	1	Intergenic	novelGene_721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAACTGGATCTGGGGAG	NA	False	NA	NA	False	NA	NA	NA	32531498	32531292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32531300_32531500
m54284U_201201_044215/29294626/ccs	chr10	-	4532	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	101.704177868554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380729_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
m54284U_201201_044215/29295210/ccs	chr6	-	3435	9	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	933	junction_2	2125.40431080183	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446874	51438100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
m54284U_201201_044215/29295278/ccs	chr2	-	3676	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	533	junction_15	579.735146289881	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022158	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156020873_156021096_156021161_156021806
m54284U_201201_044215/29296354/ccs	chr1	-	3309	9	NNC	ENSMUSG00000042305.13	novel	1689	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	288.26756234443	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289717	134273834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280876_134282398_134282580_134283297_134283452_134288494_134288663_134289271_134289362_134289499
m54284U_201201_044215/29296531/ccs	chr1	-	2895	15	NIC	ENSMUSG00000026437.12	novel	4355	16	NA	NA	0	932	intron_retention	FALSE	canonical	2	6	junction_3	40.998257802706	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGAGCAGTCTCATTCA	597	False	NA	-2	True	AATATA	-23	NA	132067422	132041391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_132042709_132043202_132043281_132043599_132043691_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
m54284U_201201_044215/29360195/ccs	chr12	+	2373	5	NNC	ENSMUSG00000020561.9	novel	4325	4	NA	NA	0	1669	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	252.648471200599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAAAGAATACC	NA	False	NA	NA	False	ATTAAA	-7	NA	33479633	33489383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_33479908_33481242_33481299_33483503_33483646_33486934_33487144_33487691
m54284U_201201_044215/29425667/ccs	chr6	-	1882	8	NNC	ENSMUSG00000058979.8	novel	1928	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	77.5305074911595	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTTGTGAGGATT	NA	False	NA	35	True	ATTAAA	-21	NA	120508280	120486454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_120487378_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
m54284U_201201_044215/29426901/ccs	chr16	+	2269	6	NIC	ENSMUSG00000005982.15	novel	2350	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	18	junction_1	49.660447037859	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702511	3722634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_3702671_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3721329
m54284U_201201_044215/29427848/ccs	chr2	-	4156	20	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	269	junction_19	31.0413003411553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168399	165131074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165132482_165134024_165134103_165136160_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
m54284U_201201_044215/29491794/ccs	chr16	+	2455	11	NIC	ENSMUSG00000022721.20	novel	2367	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	222	junction_1	22.0909483725801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGGTGAACCAGAGC	269	False	NA	8	True	AATAAA	-22	NA	18066746	18071366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070885_18070963
m54284U_201201_044215/29493048/ccs	chr15	+	4329	33	NNC	ENSMUSG00000022191.17	novel	3248	20	NA	NA	-3791	0	intron_retention	FALSE	canonical	3	27	junction_1	142.947648716016	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	32	False	NA	30	True	ATTAAA	-20	NA	12833644	12935377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_12833700_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
m54284U_201201_044215/2949607/ccs	chr16	+	1104	5	ISM	ENSMUSG00000022868.7	ENSMUST00000231932.2	848	6	2284	-543	-430	0	3prime_fragment	FALSE	canonical	3	13	junction_1	40.6540280907071	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTTCCTTGTCT	NA	False	NA	22	True	NA	NA	NA	22713078	22718193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_22713186_22713943_22714108_22715257_22715360_22716877_22716962_22717546
m54284U_201201_044215/2950593/ccs	chr12	+	1767	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_2	97.0602261485105	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201201_044215/2951271/ccs	chr2	+	362	1	Intergenic	novelGene_816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAAAAAATCCTTT	NA	False	NA	NA	False	NA	NA	NA	65150284	65150646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_65150300_65150600
m54284U_201201_044215/2951297/ccs	chr10	+	191	1	Intergenic	novelGene_5292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAAAGTAAGGTATGT	NA	False	NA	NA	False	NA	NA	NA	48155911	48156102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_48155900_48156100
m54284U_201201_044215/29557340/ccs	chr11	-	4471	16	NIC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_14	87.5255899088312	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	9016	False	NA	-8	True	AATAAA	-21	NA	4799365	4715844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
m54284U_201201_044215/29558099/ccs	chr2	+	2854	14	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	87.3500066894048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_91480598_91482093_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
m54284U_201201_044215/29622734/ccs	chr4	-	3240	16	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_11	48.1315789153949	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150076	126125959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
m54284U_201201_044215/29624097/ccs	chr7	-	1751	8	NIC	ENSMUSG00000052833.10	novel	1875	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	50	junction_2	1057.8876141073	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTGTCTCCTCTGTTT	NA	False	NA	-4	True	AATAAA	-17	NA	16121731	16060974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16061855_16064537_16064608_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
m54284U_201201_044215/29624469/ccs	chr2	+	1202	4	NNC	ENSMUSG00000086454.8	novel	582	4	NA	NA	0	72	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	214.187353086549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAGAA	NA	False	NA	-16	True	NA	NA	NA	104389528	104399249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_104389595_104390068_104390321_104398205_104398836_104398995
m54284U_201201_044215/29687937/ccs	chr11	+	178	1	Intergenic	novelGene_6007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAGTTGGCA	NA	False	NA	NA	False	NA	NA	NA	75361967	75362145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75362000_75362100
m54284U_201201_044215/29688162/ccs	chr11	+	8812	22	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	16.4620087603641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATGTAATTGCTGTGT	NA	False	NA	7	True	AATAAA	-18	NA	117545638	117654254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632494_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
m54284U_201201_044215/29689108/ccs	chr6	+	1384	7	NNC	ENSMUSG00000047115.16	novel	1304	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	11.0867789130417	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGGGTCAGATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49344756	49366214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49362309_49362390_49365750
m54284U_201201_044215/29689156/ccs	chr7	+	2106	17	NNC	ENSMUSG00000051768.10	novel	2155	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_12	88.4257280150975	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTCTCTTAGGAGAC	NA	False	NA	9	True	AATAAA	-21	NA	24246622	24272865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270299_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
m54284U_201201_044215/29689218/ccs	chr15	-	213	1	Intergenic	novelGene_7691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCCTCACCCCACCCCC	NA	False	NA	NA	False	AATGAA	-13	NA	38114806	38114593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_38114600_38114800
m54284U_201201_044215/29689916/ccs	chr4	-	182	1	Intergenic	novelGene_2416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTGGCTTAAACATTGC	NA	False	NA	NA	False	NA	NA	NA	153819189	153819007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_153819000_153819200
m54284U_201201_044215/29753375/ccs	chrX	-	191	1	Intergenic	novelGene_9649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGACCAAAAGCAATTGGA	NA	False	NA	NA	False	NA	NA	NA	141254669	141254478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_141254500_141254700
m54284U_201201_044215/29753795/ccs	chr11	+	2337	14	NIC	ENSMUSG00000020818.17	novel	2952	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	8.80424857096892	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGTATTTACTGGGA	NA	False	NA	5	True	AATAAA	-16	NA	116744587	116765538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_116744730_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
m54284U_201201_044215/29754847/ccs	chr8	+	3212	12	NNC	ENSMUSG00000001482.16	novel	3127	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	82.1393695681788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124169734	124190009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_124169791_124174431_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
m54284U_201201_044215/29755699/ccs	chr16	-	1867	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_6	156.103795795389	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831391	4826593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828761_4829475_4830160_4830290_4830374_4831166_4831239_4831326
m54284U_201201_044215/29819609/ccs	chr1	-	6068	23	NNC	ENSMUSG00000042772.16	novel	5792	23	NA	NA	-141	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_21	82.062715384018	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778538	152712746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791_152753929_152778259
m54284U_201201_044215/29819617/ccs	chr11	+	5174	25	NIC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	0	0	intron_retention	FALSE	canonical	2	19	junction_3	464.948920058848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTGTTTTTTGTAT	NA	False	NA	12	True	ATTAAA	-21	NA	23206040	23246233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_23206718_23211834_23211967_23217661_23218913_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
m54284U_201201_044215/29821501/ccs	chrX	+	3848	23	NIC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_18	237.652139178671	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118957	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201201_044215/29886859/ccs	chr12	-	3263	8	NIC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	11114	junction_4	1637.25290081419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662723	110657461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110658084_110658547_110659602_110659745_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
m54284U_201201_044215/29950143/ccs	chr11	-	168	1	Intergenic	novelGene_6411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTATTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	107044122	107043954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107044000_107044100
m54284U_201201_044215/29952604/ccs	chr7	-	1548	6	NIC	ENSMUSG00000030629.16	novel	967	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	265.896671660252	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCTACGTTTCC	NA	False	NA	NA	False	AATAAA	-13	NA	84339091	84264261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84338953
m54284U_201201_044215/30017156/ccs	chr4	+	5713	1	Intergenic	novelGene_2329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTTGGTCCATCAAAAG	1618	False	NA	NA	False	TATAAA	-11	NA	145269666	145275379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_145269700_145275400
m54284U_201201_044215/30018185/ccs	chr13	+	3403	11	NIC	ENSMUSG00000093930.3	novel	3245	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	216.614611695518	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151981	120169618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_120152050_120156425_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
m54284U_201201_044215/30018246/ccs	chr16	-	185	1	Intergenic	novelGene_8241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAATAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	35740734	35740549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_35740500_35740700
m54284U_201201_044215/30082122/ccs	chr2	-	4259	19	NNC	ENSMUSG00000039671.19	novel	5072	22	NA	NA	346	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_18	174.693461685192	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165703579	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
m54284U_201201_044215/30146747/ccs	chr18	-	2858	7	NIC	ENSMUSG00000024259.10	novel	4371	8	NA	NA	0	-1421	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	63.5883025581138	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTATGGTTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	31742964	31714641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_31716823_31727629_31727688_31730091_31730149_31735775_31735854_31738805_31738864_31740274_31740318_31742581
m54284U_201201_044215/30146975/ccs	chr17	+	3252	18	NIC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	143	522	intron_retention	FALSE	canonical	2	228	junction_9	32.0626549248569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCCTCTCCTTTGTCC	NA	False	NA	19	True	NA	NA	NA	34175061	34185469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
m54284U_201201_044215/30147337/ccs	chr6	-	3157	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	948.793358289725	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875683	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
m54284U_201201_044215/30147595/ccs	chr6	+	2295	13	NIC	ENSMUSG00000030301.18	novel	2459	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	22.1514672200286	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTGTCATGTTTTTG	NA	False	NA	17	True	AATAAA	-18	NA	147377368	147534110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_147377394_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
m54284U_201201_044215/30147641/ccs	chr15	-	2131	19	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_7	13.724358808023	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080699	89069014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
m54284U_201201_044215/30148541/ccs	chr7	-	4196	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	intron_retention	FALSE	canonical	2	37	junction_1	246.061845514866	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	9414	False	NA	-7	True	NA	NA	NA	126102609	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091615_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201201_044215/3015749/ccs	chr3	+	4023	13	NNC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_8	93.0043308430073	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	False	NA	15	True	AATAAA	-23	NA	157652875	157713671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700288_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
m54284U_201201_044215/30277684/ccs	chr1	-	3426	2	Intergenic	novelGene_526	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTCAAAATGTACGTG	6861	False	NA	NA	False	AATAAA	-24	NA	181858801	181853224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_181856457_181858607
m54284U_201201_044215/30277705/ccs	chr4	-	178	1	Intergenic	novelGene_1994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTTGAGCTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	108190386	108190208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108190200_108190400
m54284U_201201_044215/30278124/ccs	chr8	-	1684	5	NIC	ENSMUSG00000031604.11	novel	2044	6	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	28	junction_3	300.648777645944	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAATGGTTCTGTTTTTTCC	NA	False	NA	-17	True	AATAAA	-1	NA	65186615	65171172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_65172216_65173375_65173531_65175497_65175625_65180657_65180943_65186541
m54284U_201201_044215/30278962/ccs	chr9	+	3533	14	NIC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	145.238347259919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704646	109722963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
m54284U_201201_044215/30343291/ccs	chr10	-	792	6	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	211	junction_2	375.955529285047	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634028	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80632357_80632424_80632453_80632565_80632657_80633606_80633674_80633743_80633812_80633914
m54284U_201201_044215/30344886/ccs	chr13	+	1521	5	NNC	ENSMUSG00000021497.11	novel	1527	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	106.534912118047	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGTGGTTTCGCTTGT	NA	False	NA	18	True	AATAAA	-14	NA	55862462	55874040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55862658_55865610_55866081_55869391_55869556_55872320_55872452_55873479
m54284U_201201_044215/30410053/ccs	chr11	-	2636	10	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	142.650916403006	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	975	False	NA	-24	True	ATTAAA	-12	NA	79145497	79130213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79134225_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
m54284U_201201_044215/30410116/ccs	chr8	-	1613	17	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	60	junction_12	466.623103900514	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71052658_71052713_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
m54284U_201201_044215/30410889/ccs	chr17	-	2479	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	499.910221531663	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5740	False	NA	-8	True	AATAAA	-13	NA	33904393	33865212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
m54284U_201201_044215/30474433/ccs	chr15	-	2444	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	86	1618	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	3367.78349771775	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGAAACTAGTCTAATT	241	False	NA	-15	True	ATTAAA	-10	NA	37007560	36999253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_37001168_37001857_37001954_37002082_37002191_37003929_37004067_37007371
m54284U_201201_044215/30475208/ccs	chr10	-	182	1	Intergenic	novelGene_5429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGAGGATATGGGGG	9927	False	NA	NA	False	NA	NA	NA	77597189	77597007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_77597000_77597200
m54284U_201201_044215/30540153/ccs	chr13	+	222	1	Intergenic	novelGene_6999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATTGGGAGTGGGGAGT	NA	False	NA	NA	False	NA	NA	NA	25114799	25115021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_25114800_25115000
m54284U_201201_044215/30541461/ccs	chr2	-	3195	6	NIC	ENSMUSG00000035666.15	novel	6941	5	NA	NA	0	-3849	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	92.4588557143122	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAGGTGACTATTAGAA	NA	False	NA	-2	True	AATAAA	-20	NA	28730298	28716165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28729894
m54284U_201201_044215/30541832/ccs	chr11	-	3152	3	Intergenic	novelGene_6532	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	33.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTGACCTGATTCTTA	NA	False	NA	NA	False	NA	NA	NA	121847545	121832032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_121834966_121836329_121836457_121847453
m54284U_201201_044215/30542462/ccs	chr10	+	4652	21	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	0	422	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	26.6857171535636	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACTTGGGTTCCACAGT	NA	False	NA	31	True	AATAAA	-17	NA	69761648	69861206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69789269_69789303_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851397_69851484_69859661
m54284U_201201_044215/30607655/ccs	chr3	+	2763	14	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	77.7324344205606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101639	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
m54284U_201201_044215/30671692/ccs	chr8	-	642	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	156	junction_2	25.5	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTGGATGCCACATG	9329	False	NA	-15	True	TATAAA	-14	NA	111248809	111221995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_111222416_111227500_111227611_111248697
m54284U_201201_044215/30671994/ccs	chr5	-	1882	9	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1073	junction_8	121.867179236249	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650206	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
m54284U_201201_044215/30738202/ccs	chr11	-	1516	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_11	1348.24224715916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7849	False	NA	95	True	NA	NA	NA	102298209	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298063
m54284U_201201_044215/30739147/ccs	chr11	-	4837	8	NIC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_3	212.104325505066	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	776	False	NA	-11	True	AATAAA	-22	NA	120882156	120852574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120854733_120858820_120858961_120859848_120860021_120861891_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
m54284U_201201_044215/30802703/ccs	chr13	+	356	3	NNC	ENSMUSG00000021496.13	novel	544	4	NA	NA	0	-36256	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	178.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCACATTTGTAATTT	NA	False	NA	24	True	ATTAAA	-30	NA	55875180	55888385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55875288_55880748_55880881_55888268
m54284U_201201_044215/30804064/ccs	chr5	+	1940	1	Intergenic	novelGene_2857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAGAAAAAGAAAA	4047	False	NA	NA	False	NA	NA	NA	121757104	121759044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_121757100_121759000
m54284U_201201_044215/3081524/ccs	chr19	-	106	2	Genic_Genomic	ENSMUSG00000093314.3	novel	76	1	NA	NA	0	312	multi-exon	FALSE	canonical	3	548	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTTCGCTACCT	NA	False	NA	-38	True	AATAAA	-16	NA	8866138	8865750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_8865832_8866113
m54284U_201201_044215/3083090/ccs	chr8	+	2135	9	NNC	ENSMUSG00000031447.8	novel	2229	9	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	949.860376252742	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTGTCCTTCTGTGAC	8293	False	NA	21	True	AATAAA	-22	NA	13209251	13225338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13209435_13215851_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
m54284U_201201_044215/30868261/ccs	chr19	-	3347	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	0	-783	intron_retention	FALSE	canonical	3	392	junction_5	55.5637771694234	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAGGTAAGCAGCAGCT	7137	False	NA	NA	False	NA	NA	NA	11796306	11755631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11766996_11769109_11769210_11780857_11780942_11796055
m54284U_201201_044215/30934876/ccs	chr6	-	2532	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_10	186.019177230523	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
m54284U_201201_044215/30935662/ccs	chr6	+	185	1	Antisense	novelGene_ENSMUSG00000107846.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAGAGAGAAAAG	3066	False	NA	NA	False	NA	NA	NA	113653668	113653853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_+_113653700_113653900
m54284U_201201_044215/30999452/ccs	chr3	-	3496	7	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1645	junction_6	227.773827879032	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642467	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_54636315_54636614_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
m54284U_201201_044215/31129706/ccs	chr7	-	187	1	Intergenic	novelGene_3957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTACATGTCTCTATT	NA	False	NA	NA	False	NA	NA	NA	97137151	97136964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_97137000_97137200
m54284U_201201_044215/31130957/ccs	chr4	+	1765	17	NNC	ENSMUSG00000028902.5	novel	1820	17	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_9	316.549956562941	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATGAATTTTTTGTT	NA	False	NA	51	True	AATAAA	-38	NA	124608620	124626253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618554_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
m54284U_201201_044215/31131568/ccs	chr18	+	2832	21	NNC	ENSMUSG00000024231.16	novel	3828	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_5	202.699062652001	576	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-12	True	NA	72	True	ATTAAA	-28	NA	3383231	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418567_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
m54284U_201201_044215/31132036/ccs	chr3	+	2269	4	NIC	ENSMUSG00000027854.13	novel	7375	5	NA	NA	0	1287	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	176.24667057533	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCTCATTTTACTGAG	NA	False	NA	18	True	AATAAA	-15	NA	102903045	102910797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_102903284_102904558_102904702_102905805_102905920_102909023
m54284U_201201_044215/31195296/ccs	chr17	+	2644	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-94	0	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_16	36.4063951186647	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4338	False	NA	20	True	AATAAA	-22	NA	35827902	35841902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841337_35841456_35841597
m54284U_201201_044215/31195799/ccs	chr7	+	3108	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	0	intron_retention	FALSE	canonical	3	3307	junction_7	388.042723879157	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758305	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201201_044215/31197875/ccs	chr11	-	3107	6	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	54	junction_5	47.3894503027836	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGATTCTAGAGTTAA	NA	False	NA	17	True	NA	NA	NA	5015327	5010469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5015095_5015214
m54284U_201201_044215/31260938/ccs	chr15	-	5787	5	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	216	junction_4	109.82372239184	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816969	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79816648
m54284U_201201_044215/31261731/ccs	chr11	+	1370	9	NIC	ENSMUSG00000001755.13	novel	2386	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	48.4418143239908	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3571	False	NA	25	True	ATTAAA	-16	NA	100973450	100977445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_100973517_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
m54284U_201201_044215/31263579/ccs	chr1	-	5761	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-166	-729	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	35.7658315574282	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	252	False	NA	-2	True	AATAAA	-23	NA	161704417	161644411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
m54284U_201201_044215/31326489/ccs	chr1	-	2276	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	106	junction_11	1855.12359081277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4236	False	NA	-6	True	AATAAA	-16	NA	55127402	55116993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127303
m54284U_201201_044215/31392766/ccs	chr9	-	2377	6	NNC	ENSMUSG00000059820.15	novel	732	7	NA	NA	0	-749	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	45.4990109782619	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCCAGATGTGCC	89	False	NA	NA	False	AATAAA	-19	NA	50528581	50517292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_50519234_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
m54284U_201201_044215/31393958/ccs	chr17	+	4793	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	0	59437	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	37.0789360688788	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTGGCTGTGGCTTC	9439	False	NA	97	True	NA	NA	NA	3165246	3308571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
m54284U_201201_044215/31394133/ccs	chr11	-	3138	12	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	85	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	83.2218979447156	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174214	52143112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
m54284U_201201_044215/31394278/ccs	chr2	+	2827	8	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	86.7591082085498	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAATCTGCGTGGTGT	NA	False	NA	10	True	AAGAAA	-43	NA	93017905	93032094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_93018093_93027241_93027324_93027806_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029701_93029804_93030130
m54284U_201201_044215/31458112/ccs	chr7	-	2150	11	NNC	ENSMUSG00000057177.13	novel	2260	11	NA	NA	58	0	intron_retention	FALSE	canonical	2	7	junction_2	115.505151400273	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGGCTGCCTGTG	NA	False	NA	0	True	AATAAA	-21	NA	24937218	24927682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_24928356_24928889_24928946_24929275_24929466_24930029_24930126_24930209_24930308_24931059_24931167_24931258_24931390_24932998_24933110_24933252_24933337_24934977_24935166_24936802
m54284U_201201_044215/31458802/ccs	chr9	+	3656	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	135.820353288257	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704646	109722963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713386_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
m54284U_201201_044215/3146313/ccs	chr16	-	176	1	Intergenic	novelGene_8158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACCGGAGGGAGCAG	NA	False	NA	NA	False	NA	NA	NA	21927953	21927777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_21927800_21928000
m54284U_201201_044215/3146981/ccs	chr8	-	1907	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	2131.08874756543	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760017	43748103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43749574_43753664_43753743_43757512_43757597_43758460_43758596_43759877
m54284U_201201_044215/31522955/ccs	chr18	-	910	4	NNC	ENSMUSG00000024346.7	novel	1109	4	NA	NA	223	122	at_least_one_novel_splicesite	FALSE	canonical	3	254	junction_3	1343.56044399449	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGCTTTTCTCCAC	NA	False	NA	-23	True	AATAAA	-20	NA	36587354	36537135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_36537514_36565358_36565444_36584132_36584300_36587074
m54284U_201201_044215/31589077/ccs	chr19	-	2941	8	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1340	junction_2	88.8546164087317	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6524	False	NA	-3	True	AATAAA	-24	NA	4062708	4057502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4061273_4061345_4061429_4062550
m54284U_201201_044215/31590432/ccs	chr3	+	4831	29	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_8	93.8705347588814	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808254	35910425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
m54284U_201201_044215/31720607/ccs	chr16	-	3974	18	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	157	junction_16	337.763322881181	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16163861_16164010_16176627
m54284U_201201_044215/31721834/ccs	chr2	+	452	4	NIC	ENSMUSG00000078906.10	novel	919	4	NA	NA	3012	658	combination_of_known_junctions	FALSE	canonical	3	515	junction_3	284.818460700067	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCATGACTGTAACCAATG	NA	False	NA	NA	False	NA	NA	NA	174855123	174860063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174855276_174858430_174858558_174858749_174858811_174859951
m54284U_201201_044215/31785035/ccs	chr18	-	2326	7	NIC	ENSMUSG00000041840.9	novel	1003	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1190	junction_4	90.0729642505946	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTTGTTATCTGTTGC	NA	False	NA	-2	True	AATACA	-18	NA	77855480	77845268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77849817_77851772_77851909_77854563_77854739_77855419
m54284U_201201_044215/31785125/ccs	chr5	+	182	1	Intergenic	novelGene_3094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATAATAATACCT	NA	False	NA	NA	False	NA	NA	NA	150372216	150372398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_150372200_150372400
m54284U_201201_044215/31787117/ccs	chr11	-	2659	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	162.715733719883	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456501
m54284U_201201_044215/31850788/ccs	chr11	+	2921	22	NNC	ENSMUSG00000025793.18	novel	2900	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_11	97.7056526400757	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCATGATTGATTGTTCG	8182	False	NA	13	True	AATAAA	-14	NA	120358460	120374805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369140_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
m54284U_201201_044215/31852939/ccs	chr11	-	1646	13	NIC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	66.8112494686004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8372	False	NA	-10	True	AATAAA	-18	NA	82799168	82791597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82793960_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
m54284U_201201_044215/31853294/ccs	chr17	-	174	1	ISM	ENSMUSG00000092600.2	ENSMUST00000174630.2	492	2	20695	0	20695	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTCTCTTCACCATTGA	4066	False	NA	NA	False	NA	NA	NA	36054388	36054214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_36054200_36054400
m54284U_201201_044215/31917111/ccs	chrX	+	184	1	Intergenic	novelGene_9479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGATTTTTCTGCCGGG	NA	False	NA	NA	False	NA	NA	NA	57125885	57126069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_57125900_57126100
m54284U_201201_044215/31917254/ccs	chr12	+	5087	8	NNC	ENSMUSG00000048833.10	novel	5201	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.3744696293475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTATGTGAGTGGCTCTTT	NA	False	NA	12	True	ATTAAA	-17	NA	80690999	80730111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_80691191_80691317_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
m54284U_201201_044215/31982103/ccs	chr3	+	3167	10	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	68.4805099784864	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	10	True	AATAAA	-19	NA	116306776	116343630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_116306841_116313885_116314010_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
m54284U_201201_044215/31982759/ccs	chr14	-	1818	15	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	239.182589718587	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	False	NA	-2	True	AATAAA	-19	NA	30741050	30734390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_30734592_30734679_30734747_30735123_30735213_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
m54284U_201201_044215/31983049/ccs	chr5	-	176	1	Intergenic	novelGene_2799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAAGTTGCCTTGGT	NA	False	NA	NA	False	NA	NA	NA	115276973	115276797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115276800_115277000
m54284U_201201_044215/32112641/ccschrUn	chrUn_JH584304v1	-	1841	8	Intergenic	novelGene_9755	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_2	270.17454675503	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59701	52189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_53770_54335_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
m54284U_201201_044215/32113091/ccs	chr8	-	2970	6	NNC	ENSMUSG00000037251.6	novel	3613	5	NA	NA	0	-821	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	45.3431361950185	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTGCTGGCATCC	NA	False	NA	NA	False	AATAAA	-15	NA	26484161	26471452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_26473673_26476273_26476561_26477522_26477669_26479193_26479372_26479677_26479770_26484114
m54284U_201201_044215/32113150/ccs	chr1	-	3462	14	NIC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_7	582.849874608686	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669926	181642899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649163_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
m54284U_201201_044215/32113222/ccs	chr12	-	6257	14	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	490	junction_9	62.0944117963232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8772	False	NA	-24	True	AATAAA	-25	NA	101049961	101005770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
m54284U_201201_044215/32113643/ccs	chr2	-	742	4	Intergenic	novelGene_645	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_3	6.37704215656966	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGAATCTTTCTTTGCT	NA	False	NA	-6	True	AATAAA	-16	NA	26530256	26527187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_26527646_26528052_26528108_26529441_26529484_26530069
m54284U_201201_044215/32114219/ccs	chr7	-	4384	17	NIC	ENSMUSG00000031078.16	novel	3286	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	725	junction_2	104.670744927845	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024482	143989471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
m54284U_201201_044215/3212804/ccs	chrX	+	178	1	Intergenic	novelGene_9463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAATTTTTTACTTAT	NA	False	NA	NA	False	NA	NA	NA	51825062	51825240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_51825100_51825200
m54284U_201201_044215/32178508/ccs	chr2	+	3650	13	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	0	1266	intron_retention	FALSE	canonical	1	1	junction_2	9.10433352249844	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTATGATGACATTTTA	1021	False	NA	15	True	AATAAA	-26	NA	3425186	3456395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_3425364_3426400_3426453_3434783_3434844_3437474_3437531_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
m54284U_201201_044215/32245033/ccs	chr7	-	3430	10	NIC	ENSMUSG00000030421.10	novel	3441	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	145	junction_9	251.968251968378	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGCCTGCTTTATCTA	NA	False	NA	-5	True	ATTAAA	-24	NA	37718991	37659416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37718534
m54284U_201201_044215/32246298/ccs	chr19	+	4235	28	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_5	848.081981892655	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	630	False	NA	56	True	AATAAA	-16	NA	10582950	10607183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10587192_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
m54284U_201201_044215/32309321/ccs	chr3	+	182	1	Intergenic	novelGene_1506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTATTTTGGACAAGGTA	NA	False	NA	NA	False	NA	NA	NA	88862486	88862668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88862500_88862700
m54284U_201201_044215/32309992/ccs	chr15	-	5062	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	230.695603639214	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618436	88571236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
m54284U_201201_044215/32310656/ccs	chr2	+	3595	23	NNC	ENSMUSG00000040084.10	novel	3668	23	NA	NA	68	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	133.298126377934	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGCTGGCAATTCA	NA	False	NA	15	True	AATAAA	-16	NA	118428759	118472072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_118428943_118430623_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
m54284U_201201_044215/32375008/ccs	chr17	-	3510	11	NIC	ENSMUSG00000024212.10	novel	3636	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	40.9921943789302	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGGCCTGCCTTCAAT	6034	False	NA	-3	True	AATAAA	-15	NA	57242415	57199610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57212711_57212856_57226899_57226983_57233991_57234173_57242262
m54284U_201201_044215/32375606/ccs	chr11	-	220	1	Intergenic	novelGene_6425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGAGATAGGCAAAGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	107470859	107470639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107470600_107470900
m54284U_201201_044215/32376313/ccs	chr15	+	371	1	FSM	ENSMUSG00000036305.8	ENSMUST00000146505.2	151	1	-53	-167	-53	167	mono-exon	FALSE	NA	NA	NA	NA	NA	1505	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGACAAACAGACCTTC	NA	False	NA	NA	False	AATAAA	-34	NA	102543419	102543790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_102543400_102543800
m54284U_201201_044215/32376842/ccs	chr11	+	3411	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	30191	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	112.480807016441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCATAATTTGTTC	2027	False	NA	8	True	NA	NA	NA	87018013	87141700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
m54284U_201201_044215/32440771/ccs	chr11	+	2556	12	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-4475	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	2123.77658316656	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360543	55391189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55376451_55376565_55377943_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
m54284U_201201_044215/32441178/ccs	chr12	-	3374	5	NIC	ENSMUSG00000020671.10	novel	3513	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_3	580.870252293918	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGGTTTGGTTTTCAT	NA	False	NA	-2	True	TATAAA	-19	NA	3359969	3297427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_3299871_3302611_3302714_3303268_3303359_3314688_3314750_3359291
m54284U_201201_044215/32441958/ccs	chr7	+	2481	8	NIC	ENSMUSG00000058454.16	novel	2556	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	147.002151865411	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_143384137_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
m54284U_201201_044215/32506325/ccs	chr4	+	2578	20	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_8	112.769713621386	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724236_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201201_044215/32508299/ccs	chr9	-	185	1	Intergenic	novelGene_4773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAGTGGAGACATAATGC	NA	False	NA	NA	False	NA	NA	NA	53709314	53709129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_53709100_53709300
m54284U_201201_044215/32508502/ccs	chr12	+	2495	8	NNC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	89.0079106780139	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7396	False	NA	4	True	ATTAAA	-15	NA	16860963	16876753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875368
m54284U_201201_044215/32573474/ccs	chrX	+	1040	3	Intergenic	novelGene_9659	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTGTTTTAGTCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	148930495	148935556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_148930725_148930848_148930931_148934827
m54284U_201201_044215/32637980/ccs	chr17	+	5035	30	NIC	ENSMUSG00000024169.17	novel	6942	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	15.5658243289342	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCTGTACTTCTCTCG	6877	False	NA	23	True	AATAAA	-28	NA	25235058	25318469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25235111_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
m54284U_201201_044215/32639694/ccs	chr13	-	2195	16	NIC	ENSMUSG00000021494.10	novel	2199	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	642	junction_9	45.3725320724628	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684334	55678228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
m54284U_201201_044215/32768963/ccs	chr13	+	180	1	Intergenic	novelGene_6997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	24924323	24924503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_24924300_24924500
m54284U_201201_044215/32769304/ccs	chr2	-	1757	16	NIC	ENSMUSG00000017754.14	novel	1809	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_15	95.1360195836583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	False	NA	-1	True	NA	NA	NA	164699540	164681437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699464
m54284U_201201_044215/32770330/ccs	chr6	+	3044	7	NNC	ENSMUSG00000009112.5	novel	6925	7	NA	NA	0	-3842	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	75.5036790862244	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCACCAAGACCTGATGT	NA	False	NA	7	True	AATAAA	-18	NA	120813172	120865961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_120813319_120825416_120825513_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
m54284U_201201_044215/32770889/ccs	chr12	+	1811	9	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	241	junction_3	82.0182906430023	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109512312_109512426_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201201_044215/328089/ccs	chr18	-	173	1	Intergenic	novelGene_8910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	643	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTTTTAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	36396917	36396744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36396700_36396900
m54284U_201201_044215/32834976/ccs	chr12	-	2081	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_4	360.822726556962	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111636449_111636595_111637479_111637648_111638014_111638199_111638408_111638663
m54284U_201201_044215/32835445/ccs	chr16	+	4333	7	NIC	ENSMUSG00000062901.4	novel	8172	8	NA	NA	0	-3744	intron_retention	FALSE	canonical	3	32	junction_1	23.5613855468835	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTTGTCTGTTGTAA	NA	False	NA	NA	False	AGTAAA	-11	NA	19916323	19944227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_19916422_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
m54284U_201201_044215/328807/ccs	chr13	+	180	1	Intergenic	novelGene_7116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGGAAAGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	56315200	56315380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_56315200_56315400
m54284U_201201_044215/328911/ccs	chr3	-	5293	25	NIC	ENSMUSG00000033285.16	novel	3432	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	562	junction_11	50.9165814238239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGGTTCCCTGAATAT	NA	False	NA	-15	True	ATTAAA	-15	NA	100069723	100045495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_100046159_100046374_100046469_100047494_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
m54284U_201201_044215/32899148/ccs	chr18	+	2007	14	NIC	ENSMUSG00000024381.17	novel	2091	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	8.76518125122715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGAGGCGTGTCTTTCTT	NA	False	NA	16	True	AAAAAG	-23	NA	32510309	32568790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32565035_32565147_32565376_32565479_32568187
m54284U_201201_044215/32900100/ccs	chr5	+	5344	17	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	211	junction_11	76.1789628112644	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGGTAGTTTTCAATC	396	False	NA	15	True	AATAAA	-18	NA	67464307	67513129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
m54284U_201201_044215/32901869/ccs	chr4	+	4265	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	25	junction_13	149.194085003394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225248	107273543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107252194_107252259_107252928_107253030_107268262_107268424_107271222
m54284U_201201_044215/329502/ccs	chr3	-	1034	10	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1645	junction_9	191.902238485648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642467	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
m54284U_201201_044215/32965497/ccs	chr1	-	4227	9	NNC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	0	-638	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	155.65807881379	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8718	False	NA	-15	True	AATAAA	-23	NA	88205228	88190830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88198877_88198992_88200450_88200488_88202763_88202820_88204940_88205008_88205095
m54284U_201201_044215/32965970/ccs	chr4	+	5856	30	NNC	ENSMUSG00000034610.15	novel	5865	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_29	32.9423522707051	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317206	108416612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415914
m54284U_201201_044215/32967030/ccs	chr5	-	2770	7	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1095	junction_1	132.996762700785	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650236	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
m54284U_201201_044215/32967110/ccs	chr9	+	2176	13	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	-407	1098	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	43.8003678320425	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGTGCACAGTCAGGC	NA	False	NA	21	True	AATAAA	-22	NA	124195419	124202494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_124196070_124197152_124197351_124197648_124197753_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
m54284U_201201_044215/329844/ccs	chr11	-	2206	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	99	junction_6	93.9507520015295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508762	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201201_044215/33030878/ccs	chr6	-	4171	13	NIC	ENSMUSG00000030243.17	novel	3389	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	113	junction_12	19.6468827043885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCTGGTGTCTGCATT	6180	False	NA	1	True	ATTAAA	-40	NA	142332813	142307846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
m54284U_201201_044215/33031277/ccs	chr3	+	5357	10	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_9	244.759039984882	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510165	41571293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41567557
m54284U_201201_044215/33032609/ccs	chr2	-	5155	24	NIC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	0	3	intron_retention	FALSE	canonical	0	0	junction_17	148.249087890926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673785	127643041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
m54284U_201201_044215/33032825/ccs	chr5	+	457	3	NIC	ENSMUSG00000105617.5	novel	338	3	NA	NA	0	-79310	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	1163	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	7675	False	NA	17	True	AATAAA	-20	NA	31754281	31779986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31754366_31773724_31773832_31779720
m54284U_201201_044215/33032930/ccs	chr3	+	3109	8	NIC	ENSMUSG00000043542.13	novel	3292	9	NA	NA	0	-83	combination_of_known_splicesites	FALSE	canonical	3	16	junction_6	66.9154202660923	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATAAACTGCTGCTTG	NA	False	NA	-73	True	AATAAA	-6	NA	7568542	7618813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7604135_7604244_7616442
m54284U_201201_044215/33096343/ccs	chr8	+	6088	11	NIC	ENSMUSG00000031902.11	novel	5984	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	78.5147119971792	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAAATCTGAGTTTTT	NA	False	NA	9	True	AATAAA	-20	NA	106786264	106857169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106845953_106846058_106854549
m54284U_201201_044215/33098568/ccs	chr8	-	3603	6	NIC	ENSMUSG00000031489.16	novel	2795	4	NA	NA	-233	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	45.0395381859095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCCCCTGCTCGCCTT	NA	False	NA	-12	True	AATAAA	-15	NA	27740877	27715803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_27716498_27716753_27716822_27717284_27718779_27719136_27720062_27739175_27739238_27740517
m54284U_201201_044215/33161510/ccs	chr2	-	4184	19	NNC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	346	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_18	174.419752321806	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165703579	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165703460
m54284U_201201_044215/33161913/ccs	chr2	+	5922	10	NIC	ENSMUSG00000038533.16	novel	6080	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	174.353904317102	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	5317	False	NA	37	True	AATAAA	-27	NA	154278414	154381276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
m54284U_201201_044215/33162131/ccs	chr3	+	2318	12	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	239.919235721985	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_157742514_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201201_044215/33163191/ccs	chr3	-	2615	1	Intergenic	novelGene_1599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGATGTGGAAAGCA	NA	False	NA	NA	False	NA	NA	NA	102060370	102057755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_102057800_102060400
m54284U_201201_044215/33228289/ccs	chr4	+	4390	5	ISM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	30059	8843	-1545	3279	intron_retention	FALSE	canonical	3	180	junction_4	243.19578018543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAACCCGTACATACATC	NA	False	NA	NA	False	NA	NA	NA	41000964	41017150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202
m54284U_201201_044215/33293573/ccs	chr5	+	2577	26	NIC	ENSMUSG00000029176.14	novel	2758	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	93.3904149257299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTTCCATCCTTGTG	NA	False	NA	21	True	AATAAA	-21	NA	52991467	53024084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
m54284U_201201_044215/33294578/ccs	chr6	-	210	1	Intergenic	novelGene_3507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCAATTCATTAATTTGAG	7218	False	NA	NA	False	NA	NA	NA	125042632	125042422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_125042400_125042600
m54284U_201201_044215/33358275/ccs	chr7	+	6125	10	NIC	ENSMUSG00000015165.17	novel	2180	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	4757	junction_5	540.746420568851	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510361	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
m54284U_201201_044215/33359410/ccs	chr3	-	2153	12	NIC	ENSMUSG00000027968.12	novel	2121	13	NA	NA	51	0	intron_retention	FALSE	canonical	3	466	junction_6	151.248632259371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGGTTTTATTTACA	NA	False	NA	-1	True	AATAAA	-17	NA	127346945	127330362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340840_127341010_127341196_127346831
m54284U_201201_044215/33360482/ccs	chr6	-	158	1	Intergenic	novelGene_3149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAAAATAAATATTTAAA	1057	False	NA	NA	False	NA	NA	NA	30146044	30145886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_30145900_30146000
m54284U_201201_044215/33425827/ccs	chr14	-	154	1	Intergenic	novelGene_7424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAAAGACAATAAGAGT	NA	False	NA	NA	False	NA	NA	NA	48824063	48823909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_48823900_48824100
m54284U_201201_044215/33425862/ccs	chr2	+	3982	4	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078864.11	novel	1074	3	NA	NA	0	2805	multi-exon	FALSE	canonical	3	66	junction_1	90.6899479913108	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	177190007	177415070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177190111_177409836_177409964_177410168_177410230_177411379
m54284U_201201_044215/33426030/ccs	chr11	-	1772	14	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	292.613200671297	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_96798949_96799055_96799228_96799539_96799725_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
m54284U_201201_044215/3343757/ccs	chr8	+	2631	21	NIC	ENSMUSG00000032939.15	novel	2707	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	262.309259272333	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTTTCCTTTTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	94941204	95041488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_94941260_94954290_94954484_94970281_94970400_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
m54284U_201201_044215/3344698/ccs	chr6	+	2855	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	70.3565917309814	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATTGATGTTTTAT	NA	False	NA	6	True	TATAAA	-18	NA	124985995	125014600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
m54284U_201201_044215/33488944/ccs	chrX	+	177	1	Intergenic	novelGene_9677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGTAGCTACATCTTA	NA	False	NA	NA	False	NA	NA	NA	151112614	151112791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_151112600_151112800
m54284U_201201_044215/33489327/ccs	chr7	-	3182	8	NIC	ENSMUSG00000019082.19	novel	3264	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_7	23.6246153191876	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGCTTTAAGAGTCTGT	461	False	NA	-19	True	AATAAA	-18	NA	141017551	141009661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
m54284U_201201_044215/33489765/ccs	chr7	-	186	1	Intergenic	novelGene_3670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAG	6549	False	NA	NA	False	NA	NA	NA	16241961	16241775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_16241800_16242000
m54284U_201201_044215/33490325/ccs	chr18	+	2957	12	NIC	ENSMUSG00000024404.8	novel	3790	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	114.557142260861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTCATTGTGTGGTTAA	5524	False	NA	10	True	ATTAAA	-22	NA	12261816	12289758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
m54284U_201201_044215/33490345/ccs	chr1	-	2880	1	Antisense	novelGene_ENSMUSG00000038866.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-37	NA	105956990	105954110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_105954100_105957000
m54284U_201201_044215/33491793/ccs	chr5	-	1753	8	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	150	junction_7	32.2332063536462	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCCTGGTTTTGTATA	NA	False	NA	-7	True	ATTAAA	-25	NA	110256027	110251843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110252035_110252133_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
m54284U_201201_044215/33556159/ccs	chr10	-	175	1	Intergenic	novelGene_5567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTTCTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	119962281	119962106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_119962100_119962300
m54284U_201201_044215/33557153/ccs	chr1	+	7168	1	Antisense	novelGene_ENSMUSG00000102434.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATAAGTTCTGTGACTCT	1129	False	NA	NA	False	NA	NA	NA	36069786	36076954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_36069800_36077000
m54284U_201201_044215/33621086/ccs	chr9	-	1122	11	NIC	ENSMUSG00000032314.15	novel	1392	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_10	494.167593028924	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACTATCAGAAACATGC	NA	False	NA	-13	True	AATAAA	-30	NA	55419404	55361791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55419314
m54284U_201201_044215/33687305/ccs	chr4	-	1879	11	NIC	ENSMUSG00000028677.20	novel	1949	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	357.390878451032	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	9570	False	NA	NA	False	ATTAAA	-14	NA	117146643	117128660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117146399
m54284U_201201_044215/33687641/ccs	chr4	+	3001	1	FSM	ENSMUSG00000090125.4	ENSMUST00000053491.9	3849	1	848	0	848	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCCTGTTCTCTTTA	NA	False	NA	28	True	AGTAAA	-34	NA	124551447	124554448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_124551400_124554400
m54284U_201201_044215/33753111/ccs	chr3	+	2708	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	213.17886760145	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_157742514_157746073_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201201_044215/33753893/ccs	chr16	-	4103	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	172.23741868439	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709557	17658218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_17660642_17661835_17662073_17662846_17663058_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
m54284U_201201_044215/33882130/ccs	chr18	+	162	1	Intergenic	novelGene_8825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGGCCAGGCCGTGG	NA	False	NA	NA	False	NA	NA	NA	17488192	17488354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_17488200_17488400
m54284U_201201_044215/33883690/ccs	chr8	-	3756	11	NIC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	212	junction_10	48.716013794234	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580150	96562547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96564300_96567041_96567097_96568149_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
m54284U_201201_044215/33884640/ccs	chr11	-	3770	27	NIC	ENSMUSG00000020929.15	novel	3324	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	142	junction_25	268.382201192925	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTTGGTTTGCTGC	8466	False	NA	-9	True	TATAAA	-18	NA	102771793	102729302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102729723_102729975_102730084_102730245_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
m54284U_201201_044215/33884715/ccs	chr1	+	3431	8	NNC	ENSMUSG00000026123.12	novel	302	2	NA	NA	8616	0	intron_retention	FALSE	canonical	3	35	junction_1	85.0965837823621	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTGTCTCATTGTGACTTC	NA	False	NA	18	True	ATTAAA	-18	NA	34899533	34918661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_34899758_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
m54284U_201201_044215/33947852/ccs	chr16	+	1416	8	NIC	ENSMUSG00000000884.18	novel	3592	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	96.1913484166018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTCAAGGTGGGAAC	NA	False	NA	15	True	AATAAA	-17	NA	18317627	18383290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18382784
m54284U_201201_044215/33949332/ccs	chrX	+	4086	27	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1667	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	264.979356123449	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102685	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143102703_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201201_044215/34013400/ccs	chr15	-	2227	15	NNC	ENSMUSG00000013611.15	novel	2696	14	NA	NA	-4595	-248	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	7.66418918858136	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATAATCATCTCGCCAA	NA	False	NA	NA	False	NA	NA	NA	36560313	36504805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_36505617_36507844_36507902_36517744_36517823_36523588_36523703_36525719_36525924_36527830_36527924_36530919_36530990_36534560_36534649_36537653_36537745_36539442_36539554_36545694_36545760_36546925_36547041_36555404_36555480_36556627_36556725_36560155
m54284U_201201_044215/34014010/ccs	chr9	-	3971	17	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	155	junction_13	228.429112363114	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526585	108480145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521568_108522131_108522194_108526427
m54284U_201201_044215/34016070/ccs	chr17	-	4005	9	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_6	238.494758852265	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181535	15167999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
m54284U_201201_044215/34079639/ccs	chr9	-	3773	22	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	111.389126107381	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7563	False	NA	NA	False	AATAAA	-18	NA	107749970	107650761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107738821_107738929_107749847
m54284U_201201_044215/34079828/ccs	chr3	+	1882	7	NIC	ENSMUSG00000028098.14	novel	2742	10	NA	NA	0	-202	combination_of_known_splicesites	FALSE	canonical	3	119	junction_1	220.417028985209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTAAAGCTCATTTTT	4803	False	NA	20	True	ATTAAA	-20	NA	96634987	96698266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96635227_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
m54284U_201201_044215/34079963/ccs	chr2	-	2729	6	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_4	10.5754432531218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286485	127278135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_127278327_127278465_127278554_127278656_127280490_127282305_127282523_127283793_127284045_127286336
m54284U_201201_044215/3408022/ccs	chr4	-	2196	4	NIC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	0	98	intron_retention	TRUE	non_canonical	0	0	junction_1	27.6204433144888	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTCTGGATTGTCTAA	NA	False	NA	-10	True	AATAAA	-23	NA	116413132	116408731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116409321_116409518_116410927_116411964_116412101_116413069
m54284U_201201_044215/34144413/ccs	chr7	-	159	1	Intergenic	novelGene_3861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	49275942	49275783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_49275800_49275900
m54284U_201201_044215/34144635/ccs	chrX	+	203	1	Intergenic	novelGene_9377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGGTCTTCCTATATAG	NA	False	NA	11	True	NA	NA	NA	8121512	8121715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_8121500_8121700
m54284U_201201_044215/34211438/ccs	chr6	+	6055	14	NIC	ENSMUSG00000030096.9	novel	738	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	98.2890917758943	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGTGTGTTTCGGAGT	NA	False	NA	31	True	AATAAA	-25	NA	91678637	91736047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_91678807_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
m54284U_201201_044215/34212105/ccs	chr2	+	1819	15	ISM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	906	1448	0	-435	3prime_fragment	FALSE	canonical	3	800	junction_1	78.7051135439063	1005	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	164675726	164681504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
m54284U_201201_044215/34275489/ccs	chr2	+	5105	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	73.7849017091359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4592	False	NA	12	True	AATAAA	-16	NA	18069396	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18144078_18144148_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201201_044215/34275803/ccs	chr10	+	190	1	Intergenic	novelGene_5380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCAATTGTTAACTTGA	7640	False	NA	NA	False	NA	NA	NA	68145429	68145619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_68145400_68145600
m54284U_201201_044215/34277396/ccs	chr9	-	2783	9	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	126.710299502448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_58126012_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
m54284U_201201_044215/34341173/ccs	chr4	-	1095	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	0	602	at_least_one_novel_splicesite	FALSE	canonical	2	38	junction_4	495.678575288463	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTGTCTTGGTATGA	NA	False	NA	-19	True	NA	NA	NA	148172488	148164371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172420
m54284U_201201_044215/34342375/ccs	chrX	+	5002	6	NIC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1771	junction_5	204.066263747833	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357361	139376889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139372920_139374527_139374688_139375917
m54284U_201201_044215/34342651/ccs	chr14	-	2566	5	NNC	ENSMUSG00000002320.16	novel	2398	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	139.257854356586	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCCTGTCGTTGGAAGTT	5175	False	NA	48	True	AATAAA	-16	NA	55880828	55873424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_55874070_55875315_55875651_55877841_55878028_55878423_55879046_55880050
m54284U_201201_044215/34343410/ccs	chr3	-	204	1	Intergenic	novelGene_1462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGAGAAATTATTAAC	NA	False	NA	NA	False	NA	NA	NA	86174674	86174470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_86174500_86174700
m54284U_201201_044215/34472406/ccs	chr11	-	1132	4	ISM	ENSMUSG00000020865.17	ENSMUST00000178136.8	5005	31	40889	0	-901	0	intron_retention	FALSE	canonical	3	69	junction_3	10.6249183003395	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	4	True	NA	-4	True	AATAAA	-17	NA	94242913	94234120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_94234602_94236772_94236968_94241761_94241929_94242624
m54284U_201201_044215/34472818/ccs	chr16	+	5114	1	Genic_Genomic	ENSMUSG00000014303.14	novel	NA	NA	NA	NA	1789	2573	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGACTCGAGTTCAGATC	NA	False	NA	NA	False	NA	NA	NA	4431280	4436394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_+_4431300_4436400
m54284U_201201_044215/34537903/ccs	chr4	-	2159	9	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	59.0750317393059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	-21	True	NA	-13	True	AATAAA	-14	NA	34687438	34663256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34673808_34673929_34675029_34675183_34675471_34675632_34683284_34683463_34687243
m54284U_201201_044215/34539322/ccs	chr12	-	5247	23	NIC	ENSMUSG00000020647.11	novel	7329	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	21.3102330596794	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGAAAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	4527182	4299440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_4299748_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
m54284U_201201_044215/34540182/ccs	chr6	-	4122	14	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	590	junction_9	181.15892529218	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAAAGTTGGCCTCCAT	9076	False	NA	-31	True	ATTAAA	-22	NA	122316617	122294708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
m54284U_201201_044215/34540187/ccs	chr9	+	227	1	Intergenic	novelGene_5015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAAAAGTCAGGGCC	NA	False	NA	NA	False	AATAAA	-10	NA	96358069	96358296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96358100_96358300
m54284U_201201_044215/34604883/ccs	chr18	+	3042	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	96.6517229828602	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	969	False	NA	23	True	AATAAA	-28	NA	38429730	38450902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_38429852_38430518_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
m54284U_201201_044215/34668833/ccs	chr8	-	4731	9	NIC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2143	junction_1	130.956039856892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634433	122607888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_122609835_122610329_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
m54284U_201201_044215/34734780/ccs	chr2	+	4813	18	NIC	ENSMUSG00000027353.15	novel	3179	19	NA	NA	0	-180	intron_retention	FALSE	canonical	3	131	junction_1	21.5536668256985	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATTGTTTCCATTATTT	NA	False	NA	44	True	AATAAA	-36	NA	132658060	132685635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_132658386_132658993_132659166_132659624_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
m54284U_201201_044215/3474229/ccs	chr14	+	224	1	Intergenic	novelGene_7489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTATTTGTTGACCAA	6514	False	NA	NA	False	AAGAAA	-12	NA	57896508	57896732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_57896500_57896700
m54284U_201201_044215/3474284/ccs	chr13	+	212	1	Intergenic	novelGene_7234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATAATGCATTGCCTG	6854	False	NA	NA	False	NA	NA	NA	92618027	92618239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_92618000_92618200
m54284U_201201_044215/3474642/ccs	chr11	+	670	4	NIC	ENSMUSG00000060938.15	novel	500	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	269	junction_1	7467.32754515741	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGTCTTGTGTGGTGTT	NA	False	NA	33	True	ATTAAA	-14	NA	68792452	68795360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68792639_68793095_68793269_68794004_68794146_68795190
m54284U_201201_044215/3474926/ccs	chr4	+	1959	15	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	10303	3	-83	0	3prime_fragment	FALSE	canonical	3	24	junction_2	42.4615071781106	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133806065	133819812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_133806289_133807646_133807774_133808090_133808127_133808399_133808537_133808663_133808791_133809039_133809180_133809266_133809394_133809725_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
m54284U_201201_044215/3474953/ccs	chr9	+	3482	16	NNC	ENSMUSG00000009741.16	novel	3742	16	NA	NA	215	0	intron_retention	FALSE	canonical	3	95	junction_1	93.8633522142103	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1517	False	NA	23	True	AATAAA	-23	NA	113760216	113806270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201201_044215/34800377/ccs	chr11	-	2972	10	NIC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	85	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	63.2314970740233	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174214	52143112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
m54284U_201201_044215/34801523/ccs	chr9	+	5143	20	NIC	ENSMUSG00000032280.17	novel	4527	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	48.17437164201	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTGTTTTAATTGCCT	NA	False	NA	46	True	AAAAAG	-11	NA	61279664	61325779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
m54284U_201201_044215/34801701/ccs	chr9	+	3680	10	NNC	ENSMUSG00000037808.14	novel	3702	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	37.2677996249965	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACTGTGATTTGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	13739030	13757837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748135_13748269_13750935_13751038_13755324
m54284U_201201_044215/34802436/ccs	chr14	+	4412	41	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	170.394424791423	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201201_044215/34865514/ccs	chr3	+	2480	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	466.001960832784	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGTAAAGGATTCAT	NA	False	NA	43	True	AATAAA	-33	NA	151916118	151938426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
m54284U_201201_044215/34932872/ccs	chr9	-	1651	4	NNC	ENSMUSG00000110834.2	novel	461	4	NA	NA	0	1819	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	29.8477618740315	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	NNNNNNNNNNNNNNNNNNNN	NA	False	NA	NA	False	NA	NA	NA	124044769	124031168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_124032567_124033755_124033817_124033999_124034127_124044704
m54284U_201201_044215/34997477/ccs	chr4	+	2705	5	NIC	ENSMUSG00000028420.14	novel	2862	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	42.4345083628879	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGGTATTCTTCTTC	-16	True	NA	NA	False	ATTAAA	-31	NA	53826044	53862019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_53826221_53848865_53849051_53850473_53850562_53854311_53854430_53859881
m54284U_201201_044215/34998404/ccs	chr6	+	604	4	Intergenic	novelGene_3517	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_2	60.7417118260224	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCTGGTGATTTTCTGT	NA	False	NA	4	True	AATAAA	-18	NA	125409709	125435802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_125409775_125409999_125410201_125434610_125434718_125435571
m54284U_201201_044215/35062459/ccs	chr14	-	3315	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_16	38.2839509410142	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTGTCTTGGTTTC	NA	False	NA	-3	True	AGTAAA	-19	NA	123220695	123156389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
m54284U_201201_044215/35062665/ccs	chr2	-	3495	18	ISM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	50	4166	0	0	5prime_fragment	FALSE	canonical	3	761	junction_17	279.160307903274	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627944	103597451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
m54284U_201201_044215/35064177/ccs	chr10	-	5939	23	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	65	junction_22	75.6527517211053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628065	62579706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627983
m54284U_201201_044215/35127347/ccs	chr3	-	3017	11	NNC	ENSMUSG00000070372.12	novel	3193	10	NA	NA	0	-158	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	532.597230559829	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTGTGTCTGTCCTTTC	9278	False	NA	-15	True	AATACA	-14	NA	104771716	104730252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_104732441_104732722_104732786_104735240_104735328_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
m54284U_201201_044215/35128531/ccs	chrX	+	4231	10	NNC	ENSMUSG00000025529.15	novel	4330	9	NA	NA	225	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_7	4.24264068711928	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTATAATTTTATTTAAA	NA	False	NA	NA	False	AATAAA	-22	NA	111510447	111544767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_111510603_111512361_111512480_111513964_111514070_111524589_111525133_111533648_111533805_111534435_111534574_111536866_111537002_111537800_111537846_111541522_111541667_111542075
m54284U_201201_044215/35129892/ccs	chrX	+	3715	12	NIC	ENSMUSG00000044150.13	novel	578	4	NA	NA	0	0	intron_retention	TRUE	canonical	3	25	junction_1	179.30540915451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158309683	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
m54284U_201201_044215/35130098/ccs	chr19	-	4092	19	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	110.626498734355	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3860	False	NA	-1	True	AATAAA	-20	NA	7319225	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
m54284U_201201_044215/35193291/ccs	chr11	-	5471	1	Intergenic	novelGene_5857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGACCGTTTTCTCGTT	NA	False	NA	NA	False	NA	NA	NA	57451108	57445637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57445600_57451100
m54284U_201201_044215/35260242/ccs	chr8	-	3358	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	161	junction_6	43.9600321777151	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495384	70471216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
m54284U_201201_044215/35260436/ccs	chr19	+	2227	8	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_2	124.536528531895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800048	60824665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_60800112_60803049_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
m54284U_201201_044215/35326064/ccs	chr4	+	219	1	Intergenic	novelGene_2200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACACTAGCATTACCTG	NA	False	NA	NA	False	NA	NA	NA	132443296	132443515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132443300_132443500
m54284U_201201_044215/35326314/ccs	chr9	+	5169	20	NIC	ENSMUSG00000032280.17	novel	4114	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	52.0018644455867	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTGTTTTAATTGCCT	NA	False	NA	46	True	AAAAAG	-11	NA	61279647	61325779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
m54284U_201201_044215/35389989/ccs	chr4	-	5050	37	NNC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	0	238	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	63.8776982953063	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTATGTGCTACTAGCT	NA	False	NA	-6	True	ATTAAA	-14	NA	56802331	56750773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773031_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
m54284U_201201_044215/35392184/ccs	chr8	-	3542	25	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	0	-2177	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	88.8092134234331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124676004	124626038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_124626250_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
m54284U_201201_044215/35455564/ccs	chr16	+	3167	10	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	517.640158153648	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
m54284U_201201_044215/35457009/ccs	chr14	-	3875	22	NIC	ENSMUSG00000021830.15	novel	4069	24	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_20	9.63859400177566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATATTCTTTTGCA	NA	False	NA	NA	False	ATTAAA	-41	NA	45456882	45372363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45455227_45455500_45456452_45456507_45456673
m54284U_201201_044215/35521089/ccs	chr11	-	3896	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	-539	combination_of_known_junctions	FALSE	canonical	3	50	junction_25	39.3049615188719	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTGCAGCCACTTG	NA	False	NA	NA	False	AATAAA	-28	NA	86148401	86103452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029_86148242_86148330
m54284U_201201_044215/35523157/ccs	chr16	+	4697	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	67.2157466463196	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482726	31692167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
m54284U_201201_044215/35586751/ccs	chr8	-	2251	9	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	212.348144270205	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419892	110397960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110399274_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201201_044215/35586764/ccs	chr13	-	2376	16	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_15	1932.88460769562	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548923
m54284U_201201_044215/35586846/ccs	chr10	+	2680	13	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_5	23.1336695460678	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	24	True	AATAAA	-17	NA	23672883	23703866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
m54284U_201201_044215/35588421/ccs	chr3	+	4376	17	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	59	-222	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	256.702945724723	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049954	31106886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_31050235_31072698_31072821_31079278_31079369_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
m54284U_201201_044215/35651725/ccs	chr15	-	2152	17	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	0	-777	combination_of_known_junctions	FALSE	canonical	3	57	junction_16	157.969921484281	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGTTGCATAGCTC	NA	False	NA	-5	True	AATAAA	-18	NA	99549537	99519154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540849_99549387
m54284U_201201_044215/35652093/ccs	chr15	+	218	1	Intergenic	novelGene_7780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTGGACCATTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	76592079	76592297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76592100_76592300
m54284U_201201_044215/35654014/ccs	chrX	+	5324	22	NIC	ENSMUSG00000034160.14	novel	5384	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	162	junction_1	123.579218031398	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683699	100727957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100683929_100686611_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
m54284U_201201_044215/35718805/ccs	chr3	-	183	1	Intergenic	novelGene_1724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTACATGCTCTTCTTG	NA	False	NA	NA	False	NA	NA	NA	153659771	153659588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_153659600_153659800
m54284U_201201_044215/35719846/ccs	chr4	+	208	1	Intergenic	novelGene_1878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGAACTTAGAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	58164236	58164444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_58164200_58164400
m54284U_201201_044215/35782772/ccs	chr4	+	1017	7	NNC	ENSMUSG00000033423.17	novel	596	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	242.081769931842	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407541	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_117407560_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
m54284U_201201_044215/35783351/ccs	chr5	-	3683	17	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	0	-690	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	96.322050954078	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCCTTGCTTATTAC	NA	False	NA	-5	True	ATTAAA	-22	NA	23881012	23711139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
m54284U_201201_044215/35849686/ccs	chr1	-	4943	21	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	-159	intron_retention	FALSE	canonical	2	24	junction_9	150.52251492717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTATTAACATCTGAAC	NA	False	NA	-1	True	AATAAA	-22	NA	180971769	180920982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
m54284U_201201_044215/35980869/ccs	chr17	+	2982	13	NIC	ENSMUSG00000042345.16	novel	2539	13	NA	NA	0	315	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	6.05300659911163	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTTCGCTCAGGTCGT	NA	False	NA	4	True	CATAAA	-17	NA	31431086	31461379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_31431334_31432705_31432893_31434010_31434210_31436937_31437108_31438555_31438765_31447077_31447205_31450385_31450486_31451261_31451385_31454456_31454550_31456108_31456254_31456861_31456969_31458149_31458260_31460214
m54284U_201201_044215/36113050/ccs	chr2	-	3132	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	428.49093849812	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9690	False	NA	NA	False	AATAAA	-26	NA	35090994	35070216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35089832_35090022_35090771
m54284U_201201_044215/36176406/ccs	chr7	+	3154	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	126.864181947298	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTTCTAGTTTCTGG	990	False	NA	26	True	AATAAA	-14	NA	97130219	97190602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_97130358_97134126_97134319_97136558_97136677_97140137_97140245_97144863_97145023_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
m54284U_201201_044215/36177762/ccs	chr19	-	189	1	Intergenic	novelGene_9354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTCTTCTTCCCAGAC	NA	False	NA	NA	False	NA	NA	NA	59194739	59194550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_59194600_59194700
m54284U_201201_044215/36178611/ccs	chr19	-	177	1	Intergenic	novelGene_9139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAATTATGTTATTA	8267	False	NA	-9	True	NA	NA	NA	7224725	7224548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7224500_7224700
m54284U_201201_044215/36241537/ccs	chr2	+	4957	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	60.4211973436093	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4642	False	NA	12	True	AATAAA	-16	NA	18069446	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201201_044215/36241928/ccs	chr11	-	2651	11	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	831	junction_10	111.76385820112	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
m54284U_201201_044215/36242092/ccs	chr2	+	184	1	Intergenic	novelGene_568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACACGCTGGGTGTCGTGTT	NA	False	NA	NA	False	NA	NA	NA	4559134	4559318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_4559100_4559300
m54284U_201201_044215/36309332/ccs	chr17	-	2711	6	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	20.2484567313166	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580381	22556969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577897_22578420_22578506_22580148
m54284U_201201_044215/36373016/ccs	chr1	-	4459	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_16	49.6176686622645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTTTTTTTTTCTTGTG	NA	False	NA	0	True	AATAAA	-22	NA	38168743	38091866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
m54284U_201201_044215/36373435/ccs	chr11	-	1498	5	NIC	ENSMUSG00000020743.16	novel	1372	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	324	junction_4	32.8129166640212	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGTATTTCCATAGCATC	NA	False	NA	0	True	AATAAA	-18	NA	115503795	115498743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_115499440_115499886_115500262_115500364_115500475_115502728_115502861_115503610
m54284U_201201_044215/36375070/ccs	chr16	-	1718	17	NNC	ENSMUSG00000022844.9	novel	1809	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_16	132.890697567587	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGTAGAGTATGTTT	NA	False	NA	-10	True	AATAAA	-14	NA	35311243	35217681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311189
m54284U_201201_044215/36438276/ccs	chr11	+	1928	4	NIC	ENSMUSG00000069808.14	novel	2130	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	24.0739601136904	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTATGTGCCCTGGCG	3406	False	NA	NA	False	ATTAAA	-17	NA	76092840	76100242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_76093082_76093377_76093462_76097953_76098050_76098735
m54284U_201201_044215/36440700/ccs	chr6	-	5273	21	NIC	ENSMUSG00000033769.17	novel	5439	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_20	52.9942213830904	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTCTTGTGAGAT	NA	False	NA	-2	True	ATTAAA	-30	NA	85046495	84595468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_85046277
m54284U_201201_044215/36504019/ccs	chr2	-	147	1	Intergenic	novelGene_1239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATATAGGTGAACACTC	NA	False	NA	NA	False	NA	NA	NA	166751046	166750899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166750900_166751000
m54284U_201201_044215/36506292/ccs	chr3	-	3266	32	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_31	16.9376649901153	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843416	102725814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842976_102843301
m54284U_201201_044215/36570989/ccs	chr17	+	3834	20	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.9826220947193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69463804	69596984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
m54284U_201201_044215/36635034/ccs	chr4	+	3186	11	NNC	ENSMUSG00000029064.16	novel	3088	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_10	1201.40280089569	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575820	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641829
m54284U_201201_044215/36635133/ccs	chr11	+	3783	19	NIC	ENSMUSG00000020454.18	novel	3614	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	67.055647611094	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3870	False	NA	14	True	ATTAAA	-30	NA	3152688	3194588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_3152993_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
m54284U_201201_044215/36636953/ccs	chr3	+	3933	12	NIC	ENSMUSG00000039988.15	novel	3903	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_6	98.6926944301568	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGTGCCTATTAATCC	NA	False	NA	15	True	AATAAA	-23	NA	157652875	157713671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
m54284U_201201_044215/36637501/ccs	chr11	-	1108	1	ISM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	13428	1	3772	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCGTCTGGTCACTGGA	NA	False	NA	33	True	AATAAA	-19	NA	102196494	102195386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_102195400_102196500
m54284U_201201_044215/36700422/ccs	chr4	+	1903	4	NIC	ENSMUSG00000037600.17	novel	1699	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	21.9544984001001	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACCTGCCTGGTCATCA	5563	False	NA	6	True	NA	NA	NA	133246365	133258098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_133246423_133255050_133256321_133257141_133257217_133257597
m54284U_201201_044215/36700522/ccs	chr10	-	4022	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	-81	1753	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	236.356425764141	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAGTGTCTCCTACCT	8488	False	NA	0	True	AATAAA	-20	NA	117216001	117183190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117213482_117213607_117215884
m54284U_201201_044215/36702715/ccs	chr4	+	100	1	Intergenic	novelGene_1748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTTTTCTGCGACTTCC	NA	False	NA	NA	False	NA	NA	NA	11254568	11254668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_11254600_11254700
m54284U_201201_044215/3670382/ccs	chr2	+	4212	25	NIC	ENSMUSG00000002546.18	novel	4373	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_6	28.9025842270203	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGGCCTAGGGTGTTC	NA	False	NA	22	True	AATAAA	-15	NA	32178324	32197925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
m54284U_201201_044215/36832220/ccs	chrX	-	7317	26	NIC	ENSMUSG00000031386.15	novel	8138	26	NA	NA	-646	1059	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	87.5837793201458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATTGGGAGGAAGCAGAA	NA	False	NA	-9	True	AATAAA	-20	NA	73010609	72987867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
m54284U_201201_044215/36833814/ccs	chr3	-	3541	26	NIC	ENSMUSG00000042520.17	novel	3516	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	281	junction_25	245.100808648197	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201201_044215/36896789/ccs	chr13	-	4634	4	ISM	ENSMUSG00000048280.19	ENSMUST00000110973.3	683	5	415	-4012	415	3827	3prime_fragment	FALSE	canonical	2	5	junction_3	5.79271573232759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67834775	67815558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_67819731_67821116_67821213_67821680_67821808_67834536
m54284U_201201_044215/36897267/ccs	chr4	+	278	1	Intergenic	novelGene_1805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAACCAAAACACTGCT	NA	False	NA	NA	False	NA	NA	NA	40214113	40214391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_40214100_40214400
m54284U_201201_044215/36899188/ccs	chr3	+	3096	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_18	128.903138948473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622577_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/36899471/ccs	chr4	-	1600	11	NIC	ENSMUSG00000028484.17	novel	1898	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	512.655478854952	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTTTAGGTATTTTT	NA	False	NA	94	True	AATAAA	-19	NA	83404696	83380107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_83380412_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
m54284U_201201_044215/36963123/ccs	chr11	-	704	3	NNC	ENSMUSG00000018293.5	novel	861	3	NA	NA	764	0	at_least_one_novel_splicesite	FALSE	canonical	3	180	junction_2	4928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGACCTGTGTTGGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	70544660	70542675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_70543048_70543612_70543806_70544521
m54284U_201201_044215/36963831/ccs	chr9	-	842	8	NNC	ENSMUSG00000032413.13	novel	5813	24	NA	NA	0	-7970	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	17.5324771524745	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTTAGTCTTTTTTC	NA	False	NA	-7	True	AATAAA	-18	NA	96513589	96461910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_96462029_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
m54284U_201201_044215/36964332/ccs	chr2	-	1255	6	NIC	ENSMUSG00000005510.10	novel	1046	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1877	junction_5	23.7941169199447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTCCTCTGTGGTGGT	NA	False	NA	-11	True	AATAAA	-16	NA	90735046	90724979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90733289_90734766_90734833_90734927
m54284U_201201_044215/37029249/ccs	chr4	+	121	1	Intergenic	novelGene_2097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAAGGTAAAGAAATGC	NA	False	NA	NA	False	NA	NA	NA	124485123	124485244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_124485100_124485200
m54284U_201201_044215/37029574/ccs	chr11	+	4860	31	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_20	26.5057645721748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGATCCTACTATTGT	1466	False	NA	NA	False	AATAAA	-24	NA	70453706	70505309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
m54284U_201201_044215/37030008/ccs	chr16	+	3184	5	NIC	ENSMUSG00000058550.16	novel	1271	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	460	junction_4	47.9713456138141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104149	48114600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_48104205_48108240_48108359_48109401_48111678_48113273_48113470_48114061
m54284U_201201_044215/37093756/ccs	chr14	+	4206	39	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	159.488430792916	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201201_044215/37161326/ccs	chr2	-	2106	17	NNC	ENSMUSG00000027620.17	novel	2810	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_14	688.403517091357	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022158	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014940_156019255_156019306_156021096_156021161_156021806
m54284U_201201_044215/37226195/ccs	chr12	-	1664	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_4	349.982056682911	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111638014_111638199_111638408_111638663
m54284U_201201_044215/37227128/ccs	chr7	+	3181	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	91.9439732384675	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTTCTAGTTTCTGG	990	False	NA	26	True	AATAAA	-14	NA	97130219	97190602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_97130358_97134126_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
m54284U_201201_044215/3735724/ccs	chr7	-	1500	9	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_8	362.098894468072	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9917	False	NA	-4	True	ATTAAA	-15	NA	126461549	126451604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
m54284U_201201_044215/37357739/ccs	chr10	-	178	1	Intergenic	novelGene_5381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAACTATGCAATTGAGA	NA	False	NA	NA	False	NA	NA	NA	69144155	69143977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_69144000_69144200
m54284U_201201_044215/3738086/ccs	chr11	-	177	1	Intergenic	novelGene_6073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGACATGGGCC	NA	False	NA	NA	False	NA	NA	NA	78672606	78672429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_78672400_78672600
m54284U_201201_044215/37423315/ccs	chr6	-	3384	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	1040	junction_7	592.233062231416	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875683	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
m54284U_201201_044215/37486877/ccs	chr3	+	3701	15	NIC	ENSMUSG00000036825.13	novel	2416	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	66.9228919682029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTTGTCCATTCAC	NA	False	NA	22	True	ATTAAA	-24	NA	146110396	146145899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_146110691_146120450_146120555_146123361_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133923_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
m54284U_201201_044215/37487321/ccs	chr5	+	5310	42	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_7	32.6487261900406	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2005	False	NA	7	True	AATAAA	-8	NA	33021056	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021166_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
m54284U_201201_044215/37488185/ccs	chr8	-	4255	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_25	162.261990620108	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573334
m54284U_201201_044215/37488232/ccs	chr9	-	190	1	Intergenic	novelGene_4867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGATCCATCTACTG	NA	False	NA	NA	False	NA	NA	NA	64202320	64202130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_64202100_64202300
m54284U_201201_044215/37489121/ccs	chr10	-	199	1	Intergenic	novelGene_5288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTTGACCAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	44959380	44959181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_44959200_44959400
m54284U_201201_044215/37553792/ccs	chr5	-	2672	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1095	junction_1	125.764762593519	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650206	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647394_24648001_24648142_24648274_24648455_24648892
m54284U_201201_044215/37554662/ccs	chr2	-	5596	15	NIC	ENSMUSG00000000823.17	novel	5357	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_5	15.361129050766	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATTTTGTGTGGCTGAGT	7483	False	NA	-3	True	AATAAA	-24	NA	181234551	181223897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231975_181232262_181232406_181232652_181232779_181234206
m54284U_201201_044215/37619832/ccs	chr11	-	2498	5	NNC	ENSMUSG00000075611.6	novel	375	3	NA	NA	-3220	1844	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.58113883008419	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTTTCTCTGTA	2123	False	NA	NA	False	AATAAA	-24	NA	94651809	94645957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_94647982_94648187_94648387_94648522_94648622_94649100_94649124_94651656
m54284U_201201_044215/37683943/ccs	chr4	+	4919	5	ISM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	11604	13165	3036	-4375	internal_fragment	FALSE	canonical	3	458	junction_4	83.2901554807049	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGTCTGCTTCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	108448254	108458865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127
m54284U_201201_044215/37684744/ccs	chr11	-	5445	14	NIC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_6	74.428711772371	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414960	12186677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
m54284U_201201_044215/37684814/ccs	chr6	-	3493	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	1040	junction_7	595.900900027061	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875683	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
m54284U_201201_044215/37685413/ccs	chr1	+	5877	35	NNC	ENSMUSG00000041642.19	novel	9115	35	NA	NA	0	2458	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	14.7554752022057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGACTTGAAGTTTCTT	6174	False	NA	38	True	AATATA	-39	NA	136059126	136102495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080492_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
m54284U_201201_044215/37748811/ccs	chr11	-	5072	11	NIC	ENSMUSG00000040620.16	novel	5184	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	33.85793850783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGGTATCCAGCATTTA	NA	False	NA	2	True	ATTAAA	-30	NA	70895263	70874916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
m54284U_201201_044215/37814964/ccs	chr5	-	194	1	Intergenic	novelGene_2884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAGCCAACAAAGCTGC	NA	False	NA	NA	False	NA	NA	NA	123560771	123560577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123560600_123560800
m54284U_201201_044215/37815318/ccs	chr19	-	2675	12	NIC	ENSMUSG00000041488.17	novel	3068	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	185.459046291195	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGGGTACTAGTTGTA	7137	False	NA	-19	True	AATAAA	-19	NA	11796306	11752481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_11753953_11754451_11754535_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
m54284U_201201_044215/37880768/ccs	chr11	-	4022	16	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	154.916952662458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201201_044215/37881514/ccs	chr11	+	3293	11	NIC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	148.897817311067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742790	45801452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_45743020_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
m54284U_201201_044215/37882514/ccs	chr8	+	181	1	Intergenic	novelGene_4257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGACTTGTTATAATT	NA	False	NA	NA	False	NA	NA	NA	31667393	31667574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_31667400_31667600
m54284U_201201_044215/37945441/ccs	chr5	-	4270	21	NIC	ENSMUSG00000029122.12	novel	4325	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.16977917211909	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTCTTGCCTGTTTCGG	NA	False	NA	NA	False	AATAAA	-17	NA	37494222	37456514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_37457806_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
m54284U_201201_044215/37945769/ccs	chr11	-	1756	11	NNC	ENSMUSG00000018861.9	novel	1948	12	NA	NA	-254	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	42.9189934644325	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGCTGATAGCTACCA	NA	False	NA	0	True	AATAAA	-17	NA	115168130	115158849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167995
m54284U_201201_044215/38011661/ccs	chr11	-	190	1	Intergenic	novelGene_5918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	66965389	66965199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_66965200_66965400
m54284U_201201_044215/38011758/ccs	chr11	+	2728	6	NIC	ENSMUSG00000033983.15	novel	2607	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	347	junction_1	21.2847363150216	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCACTCTGAGTTATGTT	NA	False	NA	15	True	AATAAA	-17	NA	88864760	88882439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_88865029_88871894_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
m54284U_201201_044215/3802370/ccs	chr19	+	1427	5	NNC	ENSMUSG00000071649.7	novel	1603	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	83.3906469575575	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4712	False	NA	19	True	AATAAA	-16	NA	8897737	8904600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_8898013_8899169_8899345_8902901_8903087_8903445_8903737_8904099
m54284U_201201_044215/38076476/ccs	chr8	+	1295	6	NIC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	0	95	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	457.870549391419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379305	84391418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84379367_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
m54284U_201201_044215/38076509/ccs	chrX	-	2673	5	Intergenic	novelGene_9545	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_4	7.15454401062709	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTATGTGTATGTGTAA	NA	False	NA	-2	True	NA	NA	NA	95011570	95004075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_95005914_95006619_95006707_95008523_95008599_95008695_95008875_95011076
m54284U_201201_044215/38077282/ccs	chr5	+	194	1	Intergenic	novelGene_3095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTATCTTAAAGTTC	NA	False	NA	NA	False	NA	NA	NA	150538575	150538769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_150538600_150538800
m54284U_201201_044215/38079209/ccs	chr15	+	5282	23	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	114.718520052236	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCATTTTTATTATAG	NA	False	NA	17	True	AATAAA	-24	NA	65658888	65745665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_65659096_65687183_65687328_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
m54284U_201201_044215/38142137/ccs	chr16	-	3815	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_18	340.153269738188	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176397	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176362
m54284U_201201_044215/38142167/ccs	chr10	-	1486	10	NNC	ENSMUSG00000020069.17	novel	2168	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	155.339612017439	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859416
m54284U_201201_044215/38142270/ccs	chr16	-	3331	19	NIC	ENSMUSG00000022983.17	novel	4367	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	46.0144904712997	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGTTAATTTGGTGT	NA	False	NA	NA	False	AATAAA	-10	NA	90081391	90039225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
m54284U_201201_044215/38208248/ccs	chr6	+	2197	17	NNC	ENSMUSG00000029802.14	novel	5717	16	NA	NA	0	-60	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	52.4486355875918	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	16	True	ATTAAA	-23	NA	58572959	58669436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_58573003_58573993_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
m54284U_201201_044215/38209871/ccs	chr7	+	782	6	ISM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	1071	10	0	0	3prime_fragment	FALSE	canonical	3	600	junction_1	477.333007448678	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	4031	False	NA	32	True	AATAAA	-24	NA	126811850	126813460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
m54284U_201201_044215/38273509/ccs	chr11	-	198	1	Intergenic	novelGene_5912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATGTCGAATTGCATC	NA	False	NA	NA	False	NA	NA	NA	63896865	63896667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_63896700_63896900
m54284U_201201_044215/38273517/ccs	chr9	+	3742	18	NIC	ENSMUSG00000032178.15	novel	3606	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	531.820461678758	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGCCCTCCGTACTTGA	NA	False	NA	21	True	AATACA	-10	NA	21279166	21313088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21279396_21298995_21299094_21299804_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
m54284U_201201_044215/38338994/ccs	chr19	-	2362	18	NIC	ENSMUSG00000024833.16	novel	2391	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	120.985772276849	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1626	False	NA	NA	False	NA	NA	NA	6014230	5991134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011215_6013853
m54284U_201201_044215/38339204/ccs	chr4	+	2096	11	ISM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	291	6	0	0	intron_retention	FALSE	canonical	3	2891	junction_9	3977.34052351568	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321699	150333330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517
m54284U_201201_044215/38339826/ccs	chrX	+	5242	1	Intergenic	novelGene_9488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATATATTTTGACCAC	NA	False	NA	NA	False	NA	NA	NA	63977045	63982287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_63977000_63982300
m54284U_201201_044215/38339945/ccs	chr7	-	160	1	Intergenic	novelGene_3629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAATAAATAAAAAAA	7478	False	NA	NA	False	NA	NA	NA	4520677	4520517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_4520500_4520700
m54284U_201201_044215/38340378/ccs	chr13	+	1119	9	NIC	ENSMUSG00000025875.15	novel	1048	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_8	99.0959131347	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTTTATGTTCACCG	NA	False	NA	17	True	AATAAA	-18	NA	54937275	54944588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969_54944032_54944410
m54284U_201201_044215/38340670/ccs	chr9	-	170	1	Intergenic	novelGene_4913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCAAGCAGGGTT	NA	False	NA	NA	False	NA	NA	NA	70439705	70439535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_70439500_70439700
m54284U_201201_044215/38340755/ccs	chr17	+	2198	8	NIC	ENSMUSG00000062327.11	novel	2046	8	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	9.95295054191449	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGGATTATTCTCTA	NA	False	NA	10	True	AATAAA	-20	NA	8653105	8661328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_8653569_8654022_8654288_8654942_8655078_8655809_8655872_8655981_8656044_8657444_8657622_8658741_8658872_8660424
m54284U_201201_044215/38406211/ccs	chr17	+	2859	12	NIC	ENSMUSG00000091586.3	novel	1693	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_11	10.0297079380366	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAGAAAAAATGAGA	NA	False	NA	NA	False	NA	NA	NA	32725435	32749117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_32725553_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747690
m54284U_201201_044215/38406286/ccs	chr7	-	1419	8	NIC	ENSMUSG00000063802.6	novel	1593	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_7	161.654708864169	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	False	NA	-7	True	AATAAA	-16	NA	4687980	4663519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687482_4687892
m54284U_201201_044215/38471389/ccs	chr7	-	2178	13	NIC	ENSMUSG00000030677.9	novel	2115	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	712	junction_7	45.9422191453569	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTGAGCCTGGTTTTTG	7987	False	NA	-7	True	AATACA	-12	NA	126641581	126626903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
m54284U_201201_044215/38471530/ccs	chr7	-	4790	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	36.4423774608628	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29939910_29940002_29940140_29940655_29941310_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
m54284U_201201_044215/38666894/ccs	chr14	+	4345	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	162.967541126695	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886767	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201201_044215/38668882/ccs	chr11	+	4968	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	75	0	intron_retention	FALSE	canonical	2	24	junction_14	78.2544567420923	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122964	29170797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163675_29163797_29168455
m54284U_201201_044215/3867119/ccs	chr11	-	1646	5	NIC	ENSMUSG00000004394.13	novel	2003	5	NA	NA	0	-345	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	203.804287246368	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATGTGAAATAATAGAT	5343	False	NA	-1	True	AATAAA	-16	NA	6224865	6220713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224680
m54284U_201201_044215/3867573/ccs	chr9	-	4332	14	NIC	ENSMUSG00000032217.14	novel	4961	14	NA	NA	0	-457	combination_of_known_junctions	FALSE	canonical	3	148	junction_8	58.7438527565769	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2246	False	NA	-1	True	AATAAA	-15	NA	70411007	70333168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
m54284U_201201_044215/3867896/ccs	chr3	+	2630	14	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_2	190.962278254048	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_157742514_157746077_157746260_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201201_044215/3868235/ccs	chr1	-	2496	12	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_9	304.563310195689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624067	177590741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177611614_177611684_177612461_177612565_177623777
m54284U_201201_044215/38732246/ccs	chr1	+	8358	11	NIC	ENSMUSG00000033964.13	novel	3803	11	NA	NA	0	0	intron_retention	TRUE	canonical	3	36	junction_4	7.92464510246358	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACCCAGGTTCTTTTCA	NA	False	NA	NA	False	AATAAA	-22	NA	139350025	139380743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_139350065_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
m54284U_201201_044215/38732275/ccs	chr4	-	250	1	Intergenic	novelGene_2275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGACGAGGGACATGAGT	9216	False	NA	NA	False	NA	NA	NA	137757271	137757021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_137757000_137757300
m54284U_201201_044215/38732559/ccs	chr7	+	2347	8	ISM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	608	0	0	0	3prime_fragment	FALSE	canonical	3	394	junction_5	16.39686381163	409	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
m54284U_201201_044215/38732860/ccs	chr10	+	2283	13	NNC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-136	0	at_least_one_novel_splicesite	FALSE	canonical	2	39	junction_12	184.078259323462	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTGGGCTTTACCA	NA	False	NA	17	True	GGGGCT	-44	NA	80458535	80476583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855_80475913_80476040
m54284U_201201_044215/38733065/ccs	chr7	+	2265	12	NIC	ENSMUSG00000030555.17	novel	2216	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	27.3674113977112	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTTGTGTGTTTGAAA	NA	False	NA	13	True	AATAAA	-18	NA	67297172	67376324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_67297594_67301670_67301720_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
m54284U_201201_044215/38733278/ccs	chr10	-	2378	9	NNC	ENSMUSG00000003344.15	novel	2449	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_8	145.445812504176	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGAGTGCTATGTTGTC	NA	False	NA	-5	True	AATAAA	-20	NA	80492328	80478456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80492028
m54284U_201201_044215/38733551/ccs	chr12	+	3926	26	NIC	ENSMUSG00000041992.10	novel	2677	18	NA	NA	0	508	combination_of_known_junctions	FALSE	canonical	3	19	junction_15	5.78632871516992	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCTAGATACTAGTTCC	NA	False	NA	NA	False	TTTAAA	-26	NA	117497507	117720972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_117497854_117539174_117539226_117541240_117541348_117545313_117545436_117547662_117547832_117558860_117558928_117577000_117577050_117610663_117610738_117621897_117622024_117652298_117652418_117652882_117652972_117673003_117673083_117677839_117677985_117679041_117679140_117681936_117681968_117682853_117682933_117684976_117685127_117689685_117689784_117692391_117692515_117694274_117694454_117703361_117703453_117706585_117706637_117707907_117707996_117712120_117712186_117717156_117717212_117719697
m54284U_201201_044215/38733819/ccs	chr7	-	2285	18	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	112	junction_12	35.877241680322	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364419	30353135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
m54284U_201201_044215/38733870/ccs	chr16	+	1926	9	NIC	ENSMUSG00000055447.20	novel	5250	10	NA	NA	0	669	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	11.8532695911297	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAGTGTTTCTTCTCAT	NA	False	NA	NA	False	AAGAAA	-6	NA	49676018	49732123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
m54284U_201201_044215/38798823/ccs	chr7	-	3377	29	NIC	ENSMUSG00000003435.10	novel	3640	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	154.581347054368	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	False	NA	-15	True	AATAAA	-14	NA	28038171	28014322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776_28037861_28038119
m54284U_201201_044215/38799852/ccs	chr13	-	3752	28	Fusion	ENSMUSG00000042590.18_ENSMUSG00000118423.2	novel	2484	22	NA	NA	0	134	multi-exon	FALSE	canonical	0	0	junction_11	151.533623191277	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTCTTTGATACTGT	NA	False	NA	NA	False	AATAAA	-17	NA	107073453	106970366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr13_-_106971345_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
m54284U_201201_044215/38800140/ccs	chr2	+	249	1	Intergenic	novelGene_1045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTGGCTGGACATGG	NA	False	NA	NA	False	ATTAAA	-37	NA	125688435	125688684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_125688400_125688700
m54284U_201201_044215/38800187/ccs	chr17	-	1518	6	NIC	ENSMUSG00000079557.12	novel	1398	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	123.474045855799	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAAGCTGTTC	2676	False	NA	-11	True	AATAAA	-33	NA	33937644	33910488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33934916_33935037_33937519
m54284U_201201_044215/38929236/ccs	chr6	+	1478	3	NNC	ENSMUSG00000040370.14	novel	1374	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	145	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAAAGGAGTCTTTATC	NA	False	NA	14	True	NA	NA	NA	145156925	145162265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_145157127_145160909_145160998_145161076
m54284U_201201_044215/38995452/ccs	chr19	-	2156	14	NIC	ENSMUSG00000025200.8	novel	3581	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_12	38.4159730092643	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAGGCTGACAGATGTC	NA	False	NA	-13	True	AATAGA	-14	NA	44124300	44098469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120588_44121438_44121524_44124204
m54284U_201201_044215/39059571/ccs	chr13	-	1968	15	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	0	214	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	129.170430052702	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTGAAAATGTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	93328893	93283911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320822_93322315_93322406_93322810_93322985_93328601
m54284U_201201_044215/39059591/ccs	chr3	-	1985	11	NIC	ENSMUSG00000062908.13	novel	2047	12	NA	NA	0	0	intron_retention	TRUE	canonical	3	875	junction_10	61.0908340096941	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGACTCTCCAGG	157	False	NA	-6	True	AATAAA	-16	NA	153650104	153627993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644805_153647519_153647608_153650032
m54284U_201201_044215/39060297/ccs	chr17	-	2536	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_7	117.719199793407	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5806	False	NA	-30	True	AATAAA	-18	NA	46593952	46568799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46593271_46593366_46593885
m54284U_201201_044215/39060885/ccs	chr8	+	3670	20	NIC	ENSMUSG00000018796.14	novel	3897	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_1	91.0183385375634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTTTCAAGTGCCTT	2206	False	NA	17	True	AATAAA	-26	NA	46924073	46989088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_46924268_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
m54284U_201201_044215/39062161/ccs	chr15	-	1252	11	NNC	ENSMUSG00000022617.16	novel	1707	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_8	106.87300875338	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAATACAGACTTAAGT	1649	False	NA	NA	False	AATAAA	-23	NA	89313633	89310569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312762_89312916_89313031_89313251_89313361_89313579
m54284U_201201_044215/39062284/ccs	chr10	+	3263	12	NIC	ENSMUSG00000004929.13	novel	2832	13	NA	NA	0	-339	intron_retention	FALSE	canonical	3	459	junction_3	50.7521932921814	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCTGGTCCTCTCTCT	5542	False	NA	10	True	ATTAAA	-16	NA	80905960	80918054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
m54284U_201201_044215/39127457/ccs	chr8	-	4168	23	NNC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_18	111.712413021743	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8141	False	NA	-7	True	AATAAA	-14	NA	120285474	120234894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268407_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
m54284U_201201_044215/39190633/ccs	chr2	-	4201	1	Intergenic	novelGene_798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	55958969	55954768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_55954800_55959000
m54284U_201201_044215/39192445/ccs	chr2	+	1464	1	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	0	-1410	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTGTCTCGAAAAACC	NA	False	NA	NA	False	NA	NA	NA	119857984	119859448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_119858000_119859400
m54284U_201201_044215/39192468/ccs	chr5	-	4282	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	51	junction_7	217.697988658871	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201201_044215/39193436/ccs	chr13	-	184	1	Intergenic	novelGene_7157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTCATTGAACCGTG	5655	False	NA	NA	False	NA	NA	NA	63809485	63809301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_63809300_63809500
m54284U_201201_044215/39257977/ccs	chr14	-	2959	8	NIC	ENSMUSG00000021824.14	novel	1770	9	NA	NA	0	1199	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	107.347043532191	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAAATGATTTTTAAAG	NA	False	NA	-16	True	AATAAA	-9	NA	21102290	21084882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21095555_21095832_21102207
m54284U_201201_044215/39258778/ccs	chr10	+	3548	5	NIC	ENSMUSG00000060733.14	novel	1492	6	NA	NA	0	-1732	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	149.244765402342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGATGGAAGTTGCAT	2289	False	NA	7	True	AATAAA	-21	NA	71183665	71219983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_71183921_71199279_71199366_71208534_71208711_71212534_71212617_71217034
m54284U_201201_044215/39322931/ccs	chr11	-	1539	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_11	1345.10671179491	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7286	False	NA	95	True	NA	NA	NA	102298772	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298603
m54284U_201201_044215/3933872/ccs	chr11	+	179	1	Intergenic	novelGene_6011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAACAAACAAAAAA	3500	False	NA	NA	False	NA	NA	NA	75419148	75419327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75419100_75419300
m54284U_201201_044215/39387295/ccs	chr9	+	4494	7	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_5	118.632134488651	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6853	False	NA	17	True	AATAAA	-17	NA	107879832	107925981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922444_107922513_107922661
m54284U_201201_044215/39388013/ccs	chr19	+	2235	7	NIC	ENSMUSG00000034445.9	novel	2634	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	29.2845237853262	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCTCTTTTGTTCAGA	NA	False	NA	14	True	ATTAAA	-17	NA	10554817	10567193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10554928_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
m54284U_201201_044215/39454087/ccs	chr8	-	3240	18	NNC	ENSMUSG00000031696.10	novel	3474	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_15	464.870745141681	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGATTATCTTTGTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	86026098	85987020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021002_86021102_86021487_86021587_86026083
m54284U_201201_044215/39454636/ccs	chr10	-	101	1	Intergenic	novelGene_5197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAAGAAAACACAAG	8175	False	NA	26	True	NA	NA	NA	12805431	12805330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_12805300_12805400
m54284U_201201_044215/39455005/ccs	chr2	+	3774	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_2	282.415381132119	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201201_044215/39521107/ccs	chr6	+	4422	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_17	19.6910538062339	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369653	140542836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525152_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
m54284U_201201_044215/39715089/ccs	chr5	+	180	1	Intergenic	novelGene_3068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTATGTCCACACATGCTC	NA	False	NA	NA	False	NA	NA	NA	146580947	146581127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_146580900_146581100
m54284U_201201_044215/39846438/ccs	chr5	+	1821	7	NNC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	0	-2194	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	197.983164267403	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCCTGTGATGCACGTG	9017	False	NA	13	True	TATAAA	-15	NA	130251175	130270313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_130251859_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
m54284U_201201_044215/39847103/ccs	chr9	-	4419	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	-457	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	88.5629028154681	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2246	False	NA	-1	True	AATAAA	-15	NA	70411007	70333168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
m54284U_201201_044215/39847116/ccs	chr3	+	1977	9	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	87	0	intron_retention	FALSE	canonical	3	1030	junction_1	87.5457023502582	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066179	97083834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
m54284U_201201_044215/39847805/ccs	chr7	-	5061	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	132	junction_22	23.3465570993897	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107466	144030494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
m54284U_201201_044215/39976960/ccs	chr7	-	1931	1	Antisense	novelGene_ENSMUSG00000030852.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAGTAACTCAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	130266637	130264706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_130264700_130266600
m54284U_201201_044215/39977622/ccs	chr2	-	2050	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_4	628.402418836847	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105229750	105217273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225141_105225218_105229314
m54284U_201201_044215/39978025/ccs	chr13	+	2482	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	721	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	41.3548331180555	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5534	False	NA	11	True	NA	NA	NA	66711973	66724696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66722512
m54284U_201201_044215/3997946/ccs	chr7	+	1528	9	NNC	ENSMUSG00000030638.14	novel	763	4	NA	NA	-30760	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	100.011249367259	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81889333	81956627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_81889439_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
m54284U_201201_044215/39979532/ccs	chr5	-	3658	19	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_17	419.554775776112	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559841	149540309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434
m54284U_201201_044215/3998373/ccs	chr2	-	3064	8	NIC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	365.068235165059	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9690	False	NA	NA	False	AATAAA	-26	NA	35090994	35070216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
m54284U_201201_044215/3998814/ccs	chr10	-	4779	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	98.9900273270196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
m54284U_201201_044215/4000127/ccs	chr5	+	5701	16	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	145	junction_1	45.0049873779439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952091	86984518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
m54284U_201201_044215/40043589/ccs	chr11	+	2462	10	NIC	ENSMUSG00000037243.18	novel	1860	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_1	27.7666644435551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATAAGAATCTGGGAGT	7673	False	NA	28	True	AATAAA	-35	NA	58197894	58205453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_58198083_58198337_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
m54284U_201201_044215/40043680/ccs	chr18	-	3660	16	NIC	ENSMUSG00000041225.17	novel	4265	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	45.5037971553535	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGAGTTTTTTTCCAT	-23	True	NA	-23	True	AATAAA	-14	NA	6135970	6025216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6111684_6112440_6115813_6115851_6135803
m54284U_201201_044215/40109693/ccs	chr16	-	6839	32	NIC	ENSMUSG00000064061.14	novel	5820	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	21.2442316342938	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATTTCTTTATGTATT	4421	False	NA	-7	True	AATAAA	-18	NA	48814304	48744594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_48747709_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
m54284U_201201_044215/40173957/ccs	chr13	+	1177	1	FSM	ENSMUSG00000119163.1	ENSMUST00000083063.4	133	1	-977	-67	-977	67	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	62283766	62284943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_62283800_62284900
m54284U_201201_044215/40175777/ccs	chr7	-	2629	18	NIC	ENSMUSG00000052997.16	novel	2579	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	585.006840524286	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCCCTAGTGGGTTT	NA	False	NA	0	True	AATAAA	-27	NA	33868000	33840112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33840892_33841227_33841278_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
m54284U_201201_044215/40176228/ccs	chr17	-	1474	11	NIC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	274.309332688481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181535	15165270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_15165447_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
m54284U_201201_044215/40241673/ccs	chrX	+	3144	13	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	97.9595650709459	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258633	70358901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
m54284U_201201_044215/40305325/ccs	chr9	+	7648	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_24	53.463318161978	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335334	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
m54284U_201201_044215/40372261/ccs	chr13	+	5223	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	635	junction_9	57.5489730361947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911841	73964873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
m54284U_201201_044215/40436153/ccs	chr10	-	2216	3	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	0	1587	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	7.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAATAAAAATAAA	1553	False	NA	NA	False	NA	NA	NA	95297086	95279590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95281620_95296475_95296557_95296980
m54284U_201201_044215/40436646/ccs	chr3	-	186	1	Intergenic	novelGene_1679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	129358445	129358259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_129358300_129358400
m54284U_201201_044215/40566819/ccs	chr9	+	1473	12	NIC	ENSMUSG00000055720.11	novel	1364	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	84.997131696865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	False	NA	16	True	AATATA	-17	NA	57818268	57837251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_57818343_57818999_57819109_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
m54284U_201201_044215/40634043/ccs	chr4	-	2689	9	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	294.331764340854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126080227_126080382_126096362
m54284U_201201_044215/4063898/ccs	chr12	-	191	1	Intergenic	novelGene_6818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAATAAAACAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	86643633	86643442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_86643400_86643600
m54284U_201201_044215/4065320/ccs	chr11	+	3092	1	NIC	ENSMUSG00000063316.14	novel	614	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGTGTCTGCCTATTGC	2381	False	NA	62	True	ATTAAA	-18	NA	101333263	101336355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101333300_101336400
m54284U_201201_044215/40829867/ccs	chr13	+	7766	24	NIC	ENSMUSG00000021488.9	novel	12784	23	NA	NA	0	-1705	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGGGCTCTCAAGGCT	NA	False	NA	57	True	NA	NA	NA	55357594	55461863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55357689_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
m54284U_201201_044215/40830874/ccs	chr10	+	8313	30	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	488	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_13	103.989252165754	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932736	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955187_127955282_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
m54284U_201201_044215/40894749/ccs	chr14	-	1595	11	ISM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	2288	0	245	0	3prime_fragment	FALSE	canonical	3	454	junction_10	29.2567940827426	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAAGAAAAGCTTTCT	NA	False	NA	NA	False	NA	NA	NA	55957345	55953333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252
m54284U_201201_044215/40894949/ccs	chr10	-	183	1	Intergenic	novelGene_5414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGCAGGGGGCTGGCG	2702	False	NA	NA	False	NA	NA	NA	75770690	75770507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75770500_75770700
m54284U_201201_044215/40960445/ccs	chr4	+	2455	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_7	160.121096149442	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	12	True	NA	NA	False	AATATA	-15	NA	48585173	48663131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
m54284U_201201_044215/40961314/ccs	chr11	+	1974	19	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_16	235.991113297843	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455350	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
m54284U_201201_044215/40961434/ccs	chr18	+	2707	7	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	0	1931	intron_retention	FALSE	canonical	3	39	junction_2	420.200745676	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422321	67451910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_67422577_67435245_67435380_67439542_67439846_67442121_67442168_67443716_67443826_67448689_67450104_67451464
m54284U_201201_044215/40961894/ccs	chr12	+	595	1	ISM	ENSMUSG00000020660.7	ENSMUST00000218089.2	977	3	5073	0	5054	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACAACTGTCCAGTTA	NA	False	NA	57	True	AATAAA	-19	NA	4010023	4010618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_4010000_4010600
m54284U_201201_044215/41028114/ccs	chr8	+	3173	12	NIC	ENSMUSG00000001482.16	novel	589	4	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	80.3485177058087	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTAGTCTGCCATTTG	NA	False	NA	31	True	TATAAA	-20	NA	124173780	124190009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_124173893_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
m54284U_201201_044215/41091079/ccs	chr11	+	4269	10	NIC	ENSMUSG00000018398.19	novel	1806	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.2766184179422	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATGGTGTCATTTTT	NA	False	NA	17	True	ATTAAA	-19	NA	53410734	53434923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
m54284U_201201_044215/41091220/ccs	chr10	-	180	1	Intergenic	novelGene_5502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAACTATAGG	6902	False	NA	NA	False	NA	NA	NA	91131527	91131347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_91131300_91131500
m54284U_201201_044215/41158182/ccs	chr1	+	3193	13	NNC	ENSMUSG00000116048.2	novel	3219	13	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	275.294034725701	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406742	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425064_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
m54284U_201201_044215/41159016/ccs	chr5	+	3685	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	656	0	intron_retention	FALSE	canonical	3	20	junction_1	268	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	5624	False	NA	19	True	AATAAA	-30	NA	105849387	105963076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_105849441_105880095_105880241_105959589
m54284U_201201_044215/41223302/ccs	chr8	+	5122	31	NIC	ENSMUSG00000031442.22	novel	3926	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_30	7.40577852460871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTGGTTATGTGTTA	8025	False	NA	19	True	AATAAA	-26	NA	12923947	13070509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_12924017_12929881_12930151_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695_13068800_13068938
m54284U_201201_044215/41223587/ccs	chr4	-	3698	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_10	359.952118126495	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
m54284U_201201_044215/41224569/ccs	chr4	+	177	1	Intergenic	novelGene_2185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACTAATTGG	NA	False	NA	NA	False	NA	NA	NA	131889194	131889371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_131889200_131889400
m54284U_201201_044215/41288009/ccs	chr7	+	200	1	Intergenic	novelGene_3618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGGTGGCGCACGCCT	NA	False	NA	NA	False	NA	NA	NA	3450232	3450432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3450200_3450400
m54284U_201201_044215/41288379/ccs	chr18	+	3477	11	NIC	ENSMUSG00000024423.7	novel	687	8	NA	NA	74	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	238.212195321734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13107428	13126007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_13107593_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
m54284U_201201_044215/41288706/ccs	chr12	+	2597	17	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_14	355.505532437612	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCTGTTTAATATCATT	NA	False	NA	24	True	ATTAAA	-21	NA	98713247	98753107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
m54284U_201201_044215/4128894/ccs	chr10	-	1118	6	NNC	ENSMUSG00000062981.6	novel	661	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	132	junction_2	1514.28562695418	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGTGTATTTCATTA	NA	False	NA	-8	True	AATAAA	-17	NA	95337802	95316666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95316840_95326107_95326729_95329492_95329578_95332685_95332750_95336244_95336385_95337767
m54284U_201201_044215/41289660/ccs	chr8	-	2322	9	NNC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	280	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_8	79.0283770236995	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTGATTGACTTATT	NA	False	NA	-1	True	AATAAA	-26	NA	22675555	22658460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675405
m54284U_201201_044215/4129289/ccs	chr13	+	199	1	Intergenic	novelGene_7109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTCAAACACATGCAC	NA	False	NA	NA	False	NA	NA	NA	55818815	55819014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55818800_55819000
m54284U_201201_044215/4129921/ccs	chr5	+	4270	10	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	232	junction_7	20.9290394275042	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112246	107132298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107123527_107124495_107124579_107127160_107127311_107130829
m54284U_201201_044215/4131173/ccs	chr16	+	5881	31	NIC	ENSMUSG00000023088.18	novel	6792	31	NA	NA	0	818	combination_of_known_junctions	FALSE	canonical	3	25	junction_20	25.3100770445291	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCTTTCTAAACGACC	7165	False	NA	5	True	AGTAAA	-11	NA	14179430	14292724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276887_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
m54284U_201201_044215/4131235/ccs	chr2	+	4315	33	NNC	ENSMUSG00000038685.19	novel	4307	33	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_32	60.0463362745805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCTGTATTGTGGTCT	NA	False	NA	15	True	AATAAA	-16	NA	180961531	180998409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_180961650_180962598_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991774_180991918_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145_180996236_180997120_180997346_180997443_180997606_180997690
m54284U_201201_044215/41418765/ccs	chr5	-	177	1	Intergenic	novelGene_2597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	278	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATGGATTTAAA	NA	False	NA	NA	False	NA	NA	NA	66366389	66366212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_66366200_66366400
m54284U_201201_044215/41419138/ccs	chr7	+	1343	7	NIC	ENSMUSG00000025503.6	novel	1229	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	3267	junction_3	171.765748105442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCATTTCACCGTC	3840	False	NA	18	True	ATTAAA	-17	NA	140972111	140982881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140982243_140982656
m54284U_201201_044215/41421287/ccs	chr2	+	3431	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	0	1854	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	200.669205852604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGGTTGGGCAGGCACT	2378	False	NA	NA	False	NA	NA	NA	90770802	90845571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
m54284U_201201_044215/41421635/ccs	chr12	-	186	1	Intergenic	novelGene_6819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTATTTTATGTATAT	9953	False	NA	NA	False	NA	NA	NA	86875920	86875734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_86875700_86875900
m54284U_201201_044215/41484528/ccs	chr17	-	624	1	Antisense	novelGene_ENSMUSG00000090211.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAACAGAGAAGATTAAACA	NA	False	NA	NA	False	AATATA	-31	NA	13723055	13722431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_13722400_13723100
m54284U_201201_044215/41552004/ccs	chr18	+	2080	9	NIC	ENSMUSG00000024234.8	novel	2110	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_2	76.754376911027	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTAGTATCTATTTTCT	-1	True	NA	18	True	AATAAA	-20	NA	4375602	4396785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_4375779_4379568_4379742_4380672_4380888_4383184_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
m54284U_201201_044215/41617668/ccs	chr5	+	2325	6	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	388.365497952637	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGCTCCTGTGGT	NA	False	NA	16	True	AATAAA	-17	NA	111478628	111536225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_111478700_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
m54284U_201201_044215/41681392/ccs	chr11	-	177	1	Intergenic	novelGene_6324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	100309245	100309068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_100309100_100309200
m54284U_201201_044215/41683220/ccs	chr9	-	3976	14	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	0	-166	intron_retention	FALSE	canonical	0	0	junction_13	62.5774786037466	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6378	False	NA	-27	True	AATAAA	-27	NA	44272967	44259390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44266448_44266995_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
m54284U_201201_044215/41747613/ccs	chr7	+	4008	17	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	154	junction_1	59.7013400184619	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247658	130366515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130248161_130264745_130264872_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
m54284U_201201_044215/41747829/ccs	chr11	+	3290	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	223.557350335186	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697083	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97697132_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201201_044215/41748612/ccs	chr11	-	2048	13	NNC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_12	707.716025127467	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5278	False	NA	-9	True	AATAAA	-20	NA	88846214	88814845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846091
m54284U_201201_044215/41878739/ccs	chr13	+	189	1	Intergenic	novelGene_7188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAACAGGAAATCAA	NA	False	NA	NA	False	NA	NA	NA	67417660	67417849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_67417700_67417800
m54284U_201201_044215/41880115/ccs	chr11	+	4385	14	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	36.0494400813316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTCTGCCTGTCTGTCC	NA	False	NA	18	True	TATAAA	-22	NA	77873579	77921365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_77874204_77874841_77875024_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
m54284U_201201_044215/41943776/ccs	chr2	+	5524	13	NIC	ENSMUSG00000042133.17	novel	6127	14	NA	NA	0	1065	intron_retention	FALSE	canonical	3	282	junction_1	43.390587176893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTGGTGTAATACTG	NA	False	NA	NA	False	AATAAA	-21	NA	69553197	69580957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69579442_69579615
m54284U_201201_044215/41943949/ccs	chr4	+	4081	21	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	72.8474433319386	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	False	NA	14	True	ATTAAA	-15	NA	74170172	74324097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_74170324_74181045_74181207_74189430_74189607_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
m54284U_201201_044215/41944643/ccs	chr1	+	1835	3	NIC	ENSMUSG00000038793.9	novel	1620	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	245	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGTTTCCTTATT	NA	False	NA	8	True	AATAAA	-17	NA	180762586	180765965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_180762925_180764111_180764820_180765176
m54284U_201201_044215/4195087/ccs	chrX	+	10480	23	Fusion	ENSMUSG00000041245.14_ENSMUSG00000086286.2	novel	5253	22	NA	NA	-192	0	multi-exon	TRUE	canonical	3	19	junction_6	4.9057227502662	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTATGTCACCTTATTAA	NA	False	NA	NA	False	AATAAA	-19	NA	149952503	150103148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chrX_+_149952709_149981017_149981670_149990593_149990767_149992270_149992492_149993868_149994027_150009451_150009541_150013228_150013449_150015940_150016236_150019529_150019631_150019888_150020033_150049263_150049329_150057913_150058062_150059848_150059966_150067265_150067422_150067500_150067553_150068774_150068913_150069255_150070203_150076805_150076897_150077417_150077549_150078359_150078971_150084561_150084771_150092277_150092481_150097794
m54284U_201201_044215/4195402/ccs	chr2	-	143	1	Intergenic	novelGene_1267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAATGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	168652728	168652585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168652600_168652700
m54284U_201201_044215/4195421/ccs	chr5	+	1773	11	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1008.58886073563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377825	38391650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_38377980_38380274_38380399_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
m54284U_201201_044215/4195858/ccs	chr2	-	1937	1	Antisense	novelGene_ENSMUSG00000006494.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGGAACCCTAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	71726126	71724189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_71724200_71726100
m54284U_201201_044215/4196179/ccs	chr11	-	1810	6	NIC	ENSMUSG00000018761.15	novel	1321	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	628	junction_2	17.9844377170931	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTAGTGTGCATTCT	6816	False	NA	-4	True	AATAAA	-33	NA	69553413	69547522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69549525_69549636_69549703_69553294
m54284U_201201_044215/4196607/ccs	chr13	-	2717	4	NNC	ENSMUSG00000118666.1	novel	1567	4	NA	NA	-7316	967	intron_retention	FALSE	canonical	3	55	junction_2	9.53356643071673	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	1878	False	NA	-1	True	NA	NA	NA	66439281	66427982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_66430404_66431569_66431631_66431830_66431958_66439173
m54284U_201201_044215/4196870/ccs	chr8	+	3338	24	NNC	ENSMUSG00000034330.11	novel	4298	33	NA	NA	81294	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	35.9048311486207	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTCTGTACCTGATCTGT	NA	False	NA	11	True	AATAAA	-23	NA	118306323	118361881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_118306416_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
m54284U_201201_044215/42008926/ccs	chr4	-	2786	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	122.011636765404	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980882	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980610
m54284U_201201_044215/42010872/ccs	chr13	-	3310	14	NIC	ENSMUSG00000021668.16	novel	4225	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	10.888352171828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTATTGACTGTCATAT	NA	False	NA	NA	False	AATAAA	-20	NA	96678993	96617197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_96618763_96618965_96619000_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
m54284U_201201_044215/42010985/ccs	chr12	-	1480	11	NNC	ENSMUSG00000056458.17	novel	1693	12	NA	NA	1825	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_10	69.773992289391	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAGGGTTTGTTTCATTT	9497	False	NA	-3	True	AATATA	-18	NA	110805536	110774231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_110774556_110774638_110774840_110776342_110776458_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110805381
m54284U_201201_044215/42075228/ccs	chr6	-	176	1	Intergenic	novelGene_3374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGTTTTTAAATAA	NA	False	NA	NA	False	NA	NA	NA	87090443	87090267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_87090300_87090400
m54284U_201201_044215/42271722/ccs	chr13	-	1501	10	NIC	ENSMUSG00000021417.16	novel	1414	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	51.9781530555072	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTTAAGAATTCATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	35178106	35161732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177312_35177996
m54284U_201201_044215/42336468/ccs	chr4	-	3196	7	NIC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_2	149.812568082773	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCTAATGAAGTTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	126954917	126941385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126943700_126944356_126944395_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
m54284U_201201_044215/42337447/ccs	chr1	-	169	1	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAGTAAAATAAATCAAAA	296	False	NA	NA	False	NA	NA	NA	10008867	10008698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_10008700_10008900
m54284U_201201_044215/42468115/ccs	chr2	-	2119	10	NIC	ENSMUSG00000041975.18	novel	2347	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	29.4505234814822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTGTTGGAGTTTT	NA	False	NA	0	True	NA	NA	NA	70885927	70794904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812312_70823827_70823920_70848563_70848719_70885714
m54284U_201201_044215/42469726/ccs	chr2	-	3203	7	ISM	ENSMUSG00000068373.16	ENSMUST00000136156.9	10127	21	208922	3968	39771	-3968	3prime_fragment	FALSE	canonical	0	0	junction_5	1.77169096878911	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTATATATGGTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	104031757	103977385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_103979408_103983276_103983429_103985254_103985404_103987127_103987226_103998182_103998534_104022779_104022910_104031456
m54284U_201201_044215/42532900/ccs	chr9	+	6570	41	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_31	15.7384084328753	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCCAAGTAACTTCCT	2333	False	NA	9	True	AATAAA	-17	NA	74978469	75125766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
m54284U_201201_044215/42533228/ccs	chr13	+	1871	9	NNC	ENSMUSG00000021661.17	novel	1755	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	62.5658403204177	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGATTATATGCTTGTC	NA	False	NA	14	True	AATAAA	-24	NA	98399646	98410426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_98399985_98402658_98403054_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
m54284U_201201_044215/42535243/ccs	chr7	+	2960	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	320.022361294324	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648584_3648991_3649065_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201201_044215/42598780/ccs	chr18	+	526	5	NNC	ENSMUSG00000024608.12	novel	597	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_4	11393.8728600068	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTGGTGTTGTGT	NA	False	NA	68	True	AATAAA	-18	NA	60907736	60911618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911504
m54284U_201201_044215/42600414/ccs	chr7	+	4417	25	NIC	ENSMUSG00000039990.17	novel	5424	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_18	40.1817917580698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGGTAGTTCCCACTT	NA	False	NA	6	True	AATAAA	-19	NA	133239421	133273908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261864_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
m54284U_201201_044215/42600451/ccs	chr5	-	2047	12	NIC	ENSMUSG00000029422.16	novel	2344	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_7	199.263561501216	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	4323	False	NA	-8	True	AATAAA	-13	NA	123887475	123866786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
m54284U_201201_044215/42601000/ccs	chr14	+	1617	8	ISM	ENSMUSG00000053205.10	ENSMUST00000226303.2	1730	12	7514	150	7494	-150	3prime_fragment	FALSE	canonical	3	78	junction_3	71.6200291219472	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTATCTTTAAATCATGA	NA	False	NA	NA	False	TTTAAA	-10	NA	45596192	45611608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
m54284U_201201_044215/4260995/ccs	chr17	-	180	1	Intergenic	novelGene_8724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTTCTT	NA	False	NA	NA	False	NA	NA	NA	74758395	74758215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_74758200_74758400
m54284U_201201_044215/4261899/ccs	chr10	-	2629	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	294.083868648568	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269481	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
m54284U_201201_044215/42664834/ccs	chr6	+	2323	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	88.3270111554443	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	1976	False	NA	13	True	AATAAA	-14	NA	113214811	113258157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113215083_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
m54284U_201201_044215/42665924/ccs	chr12	-	3324	19	NIC	ENSMUSG00000033530.9	novel	3446	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_15	53.9158294628458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTTTTGTCTTTCA	NA	False	NA	-1	True	AATAAA	-21	NA	100487085	100267028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100432438_100432570_100461530_100461700_100466334_100466490_100486829
m54284U_201201_044215/42795155/ccs	chr11	-	2881	14	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_8	76.514298466512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860799	70833902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
m54284U_201201_044215/42926789/ccs	chr7	-	1795	3	NIC	ENSMUSG00000060860.9	novel	1238	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	9878	junction_1	101.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGCCTGAAGTGTC	NA	False	NA	-25	True	AATAAA	-15	NA	4815350	4811012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4811484_4813420_4814556_4815161
m54284U_201201_044215/42927190/ccs	chr5	+	2391	14	NNC	ENSMUSG00000029171.13	novel	2369	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	200.61346742831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATAAGGTTTATTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	64250292	64285694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260697_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
m54284U_201201_044215/42994310/ccs	chr10	-	2811	7	NNC	ENSMUSG00000061904.13	novel	1395	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	13	junction_3	1696.88073305764	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959819	90952652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954556_90954743_90955388_90955569_90957783_90959569_90959777
m54284U_201201_044215/43058133/ccs	chr7	-	2967	5	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_4	251.333443854971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126626209	126621301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126625487_126626122
m54284U_201201_044215/43058915/ccs	chr4	-	189	1	Intergenic	novelGene_2374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	148953390	148953201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_148953200_148953400
m54284U_201201_044215/43059130/ccs	chr4	+	4684	19	NIC	ENSMUSG00000057530.15	novel	728	5	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	12.6238310789994	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	516	False	NA	16	True	AATAAA	-16	NA	137640841	137692540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137640941_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
m54284U_201201_044215/43125121/ccs	chr3	-	3399	13	NNC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	0	-1351	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.5594647204927	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCACTCTACCTTACC	NA	False	NA	2	True	AATAAA	-24	NA	19365486	19280196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287623_19287782_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
m54284U_201201_044215/43188956/ccs	chrX	+	199	1	Intergenic	novelGene_9442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTCCAACTTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	42542424	42542623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_42542400_42542600
m54284U_201201_044215/43190395/ccs	chr5	-	316	1	Intergenic	novelGene_2483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATAGAGACTGT	NA	False	NA	NA	False	AATAAA	-14	NA	23943194	23942878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_23942900_23943200
m54284U_201201_044215/43191115/ccs	chr5	-	5077	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	210.959168347951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957963	110932353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110934094_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
m54284U_201201_044215/4325424/ccs	chr4	-	5675	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	40.1361398520364	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_70141347_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
m54284U_201201_044215/4325930/ccs	chr5	-	4860	6	NIC	ENSMUSG00000015882.19	novel	4884	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_4	27.5782523014059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACTATACTGAGTTCTT	NA	False	NA	NA	False	AGTAAA	-17	NA	46014855	45887676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_45891828_45893072_45893167_45904397_45904650_45932733_45932864_45952634_45952701_46014688
m54284U_201201_044215/4327960/ccs	chr18	+	1980	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	237.141378171329	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	10	True	NA	14	True	AATAAA	-14	NA	9958176	9993725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
m54284U_201201_044215/43384865/ccs	chr1	-	1783	16	NIC	ENSMUSG00000026245.17	novel	1801	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	36	junction_12	352.114653044841	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTGCGTAGCTGCATTA	NA	False	NA	-2	True	AATAAA	-19	NA	78465499	78401721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78454829_78454900_78456593_78456749_78458944_78459001_78465421
m54284U_201201_044215/43385173/ccs	chr9	-	2230	14	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	0	-887	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	42.465997536212	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAGTCTGTGATTTTGTT	8517	False	NA	NA	False	NA	NA	NA	49710225	49443462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_49443699_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
m54284U_201201_044215/43450434/ccs	chr9	-	174	1	Intergenic	novelGene_4831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAAAAAGAGCTC	NA	False	NA	NA	False	NA	NA	NA	59591072	59590898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_59590900_59591100
m54284U_201201_044215/43517314/ccs	chr14	+	184	1	Intergenic	novelGene_7530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTTAGTACCACCAT	NA	False	NA	NA	False	NA	NA	NA	69671678	69671862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_69671700_69671900
m54284U_201201_044215/43518276/ccs	chr2	+	1286	7	NIC	ENSMUSG00000098789.8	novel	1373	8	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	49.2084568161025	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTTCTCATGTTCC	NA	False	NA	6	True	NA	NA	NA	119857973	119863075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862321_119862482_119862594
m54284U_201201_044215/43583340/ccs	chr1	-	1341	7	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1307.01310245919	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287401	128259326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128283317_128283397_128287195
m54284U_201201_044215/43647507/ccs	chr5	+	2549	15	NNC	ENSMUSG00000029504.6	novel	4846	15	NA	NA	0	333	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	36.2527972179037	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCGATAGCTCCAACACA	NA	False	NA	13	True	AATAAA	-24	NA	110801316	110806070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803435_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
m54284U_201201_044215/43647855/ccs	chr6	+	179	1	Intergenic	novelGene_3449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGACACTGT	NA	False	NA	NA	False	NA	NA	NA	120005422	120005601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120005400_120005600
m54284U_201201_044215/43648482/ccs	chr13	-	3311	7	ISM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	68	78	0	-77	3prime_fragment	FALSE	canonical	3	107	junction_3	24.5453095768259	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252274	120226800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684
m54284U_201201_044215/43648913/ccs	chr13	-	4061	2	Intergenic	novelGene_7175	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	224	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65632673	65628411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_65628768_65628968
m54284U_201201_044215/43713908/ccs	chr2	+	4355	11	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	302	junction_7	33.9022123171925	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3998	False	NA	33	True	ATTAAA	-21	NA	25222773	25242224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
m54284U_201201_044215/43778174/ccs	chr8	-	3448	10	NNC	ENSMUSG00000040010.11	novel	3517	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	736.813275171624	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGACTGTGTTCTGTG	NA	False	NA	NA	False	TTTAAA	-18	NA	122634433	122607888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_122609835_122610329_122610439_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
m54284U_201201_044215/43778312/ccs	chr1	-	4365	17	NNC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-216	-688	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_15	200.559597984614	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCATGCGTCTTGGATTA	NA	False	NA	-8	True	ATTAAA	-19	NA	80318413	80243327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80299501_80299630_80300575_80300774_80317962
m54284U_201201_044215/43778400/ccs	chr17	-	175	1	Intergenic	novelGene_8503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTAAAAAAGAAGCAAT	NA	False	NA	NA	False	NA	NA	NA	30157742	30157567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_30157600_30157700
m54284U_201201_044215/43778599/ccs	chr11	-	2111	20	NIC	ENSMUSG00000057897.15	novel	4004	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	33.5580697347349	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAAAAATCTGGCATTT	2874	False	NA	-43	True	NA	NA	NA	6015748	5921567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5926764_5926894_5929672_5929722_5932500_5932573_5932720_5932762_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
m54284U_201201_044215/43843617/ccs	chr5	+	4955	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	140.055390459254	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGTCAGTTGTGTTCT	NA	False	NA	38	True	ATTAAA	-38	NA	29774239	29881090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824318_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
m54284U_201201_044215/43844183/ccs	chr6	-	2907	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-964	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	344.562702017066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113520	148081540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092416_148092522_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
m54284U_201201_044215/4391007/ccs	chr2	+	170	1	Intergenic	novelGene_1020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCTTTTAAAAAAATTCTA	7661	False	NA	NA	False	NA	NA	NA	120602511	120602681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_120602500_120602700
m54284U_201201_044215/43910522/ccs	chr13	-	4384	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	51.3880070904416	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718933	55687131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55717517
m54284U_201201_044215/43911838/ccs	chr14	+	3461	6	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	33.4269352468933	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47710017	47769419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47744721_47744904_47763661_47763772_47766631
m54284U_201201_044215/4393383/ccs	chr7	-	2114	4	NNC	ENSMUSG00000038459.11	novel	2238	3	NA	NA	-180	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	681.293377823876	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGTGGGCTTATGTGCTCC	NA	False	NA	-7	True	AATAAA	-18	NA	83801281	83758563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_83759616_83759919_83760010_83763458_83763639_83800489
m54284U_201201_044215/43975909/ccs	chr14	-	1005	8	NNC	ENSMUSG00000021807.7	novel	1562	8	NA	NA	0	-566	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	945.86932263934	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGTTTGTTTTGCTCTG	1688	False	NA	-24	True	AATAAA	-16	NA	19873892	19861984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867119_19867216_19869974_19870075_19872633_19872759_19873736
m54284U_201201_044215/43976110/ccs	chr8	-	2935	23	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	80.7011756547953	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175316	73094842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73095369_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
m54284U_201201_044215/43976373/ccs	chr11	-	3182	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.524559546787	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
m54284U_201201_044215/43977362/ccs	chr13	-	218	1	Intergenic	novelGene_7161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAATA	4076	False	NA	NA	False	NA	NA	NA	64366277	64366059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64366100_64366300
m54284U_201201_044215/44042881/ccs	chr19	+	3483	12	NNC	ENSMUSG00000010663.6	novel	3460	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	232.232357281657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160302	10174238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_10160629_10162290_10162476_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
m54284U_201201_044215/44043101/ccs	chr16	-	1734	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1593	junction_7	131.986393856584	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746073	17743086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745517_17745849
m54284U_201201_044215/44106150/ccs	chr18	-	3091	13	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	500	junction_2	41.528019322969	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088069	38070024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
m54284U_201201_044215/44106251/ccs	chr2	-	3432	10	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	51	0	intron_retention	FALSE	canonical	3	1239	junction_4	89.9296020970477	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTCTCTGGTTGT	NA	False	NA	-28	True	TATAAA	-14	NA	11608022	11590251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_11590540_11590644_11590718_11591677_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
m54284U_201201_044215/44107070/ccs	chr5	+	3988	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_8	233.254943100303	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201201_044215/44171896/ccs	chr13	+	4371	8	NIC	ENSMUSG00000021431.16	novel	1785	9	NA	NA	0	79	intron_retention	FALSE	canonical	3	101	junction_4	51.7734468228489	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACACTACACACTTAGA	NA	False	NA	15	True	AATAAA	-23	NA	38388920	38411035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38404753_38405210_38405370_38410849
m54284U_201201_044215/44172860/ccs	chr2	+	2945	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	225.275695291101	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130119891_130120075_130120211_130120816
m54284U_201201_044215/44172914/ccs	chr7	+	3433	30	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_13	79.6750534974508	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGGCGTT	9875	False	NA	36	True	AATATA	-18	NA	24603782	24626019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24618608_24618777_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
m54284U_201201_044215/44303467/ccs	chr11	-	6645	24	NNC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_23	93.9754824640333	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442705	101379589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101441522_101441596_101442594
m54284U_201201_044215/44368347/ccs	chr2	+	168	1	Intergenic	novelGene_1240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACAATTATGATT	5755	False	NA	NA	False	NA	NA	NA	166811403	166811571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_166811400_166811600
m54284U_201201_044215/44369357/ccs	chr18	-	4826	17	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	0	-147	combination_of_known_junctions	FALSE	canonical	3	86	junction_16	10.4634781502137	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-15	True	NA	NA	False	AATAAA	-17	NA	7626859	7348110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7443973_7444106_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
m54284U_201201_044215/44369486/ccs	chr2	-	2828	18	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	816.691426312992	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022132	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156021096_156021161_156021806
m54284U_201201_044215/44370440/ccs	chr10	+	192	1	Intergenic	novelGene_5193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTCAAAATTCTCATAT	NA	False	NA	NA	False	NA	NA	NA	11437532	11437724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_11437500_11437700
m54284U_201201_044215/44434922/ccs	chr6	+	184	1	Intergenic	novelGene_3231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGCATCCATATATGAGA	NA	False	NA	NA	False	NA	NA	NA	39733726	39733910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_39733700_39733900
m54284U_201201_044215/44435595/ccs	chr17	+	4101	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1413	junction_5	316.321875451081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	499	False	NA	36	True	AATAAA	-20	NA	56610399	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201201_044215/44565702/ccs	chr3	+	204	1	Intergenic	novelGene_1417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGCAGTTACTTAACA	NA	False	NA	NA	False	NA	NA	NA	58855393	58855597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_58855400_58855600
m54284U_201201_044215/4458974/ccs	chr11	-	3194	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	456.395913206765	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
m54284U_201201_044215/44630348/ccs	chr4	-	6030	50	NIC	ENSMUSG00000050812.19	novel	7045	49	NA	NA	0	-1119	combination_of_known_junctions	TRUE	canonical	3	17	junction_49	33.7119878645701	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTCCTTATTAGCTTT	-22	True	NA	-12	True	AATAAA	-19	NA	58912749	58800029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58905003_58905108_58912475
m54284U_201201_044215/44695775/ccs	chr8	+	2552	6	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	282	junction_1	51.2312404690732	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAACTTTCTTTAGCAC	NA	False	NA	39	True	AATAAA	-26	NA	96442542	96445638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96444730_96444820_96444964_96445103
m54284U_201201_044215/44696035/ccs	chr12	+	179	1	Intergenic	novelGene_6661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATACATAAATAAATAAC	5113	False	NA	NA	False	NA	NA	NA	59077390	59077569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_59077400_59077600
m54284U_201201_044215/44697040/ccs	chr4	+	5055	20	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	166.045132869303	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/44761843/ccs	chr9	+	3671	6	NIC	ENSMUSG00000047412.17	novel	8861	6	NA	NA	-243	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_5	107.784971123065	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAACTTTTGTGTAAT	NA	False	NA	32	True	ATTAAA	-35	NA	30941696	30981529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978256_30980040
m54284U_201201_044215/44762150/ccs	chr4	-	2022	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	109.846483785327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	94445033	94388317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_94389654_94409298_94409373_94437355_94437432_94439501_94439703_94444698
m54284U_201201_044215/44763059/ccs	chr11	+	260	1	Intergenic	novelGene_5792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAAACCTGGCC	NA	False	NA	NA	False	ATTAAA	-42	NA	48664791	48665051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_48664800_48665100
m54284U_201201_044215/44763665/ccs	chr2	-	2611	6	NNC	ENSMUSG00000038848.15	novel	3184	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	228.880230688454	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGTGTTCTTGTTTTC	NA	False	NA	-2	True	NA	NA	NA	180562742	180546169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_180547462_180552479_180553254_180553826_180554001_180560927_180561008_180562104_180562130_180562476
m54284U_201201_044215/44828680/ccs	chr2	-	185	1	Intergenic	novelGene_1324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGGTTAAACACTATT	6294	False	NA	NA	False	NA	NA	NA	181014287	181014102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181014100_181014300
m54284U_201201_044215/44892166/ccs	chr13	+	226	1	Intergenic	novelGene_7146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCCATCGACAAGAAACT	NA	False	NA	NA	False	NA	NA	NA	62695926	62696152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62695900_62696200
m54284U_201201_044215/44894486/ccs	chr13	-	1465	7	NNC	ENSMUSG00000034891.14	novel	1351	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.2679941957663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGCGCCGCCTAGGCAGG	NA	False	NA	-1	True	AATAAA	-16	NA	54914408	54906672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_54907355_54907680_54907771_54910455_54910575_54910734_54910774_54913375_54913506_54913637_54913752_54914117
m54284U_201201_044215/44894537/ccs	chr11	-	2020	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_9	1411.88872712327	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69558444_69558520_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
m54284U_201201_044215/44894572/ccs	chr2	+	2684	8	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	211.243548385966	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119891_130120075_130120211_130120816
m54284U_201201_044215/44957725/ccs	chr11	+	8038	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	0	0	intron_retention	TRUE	canonical	3	400	junction_2	47.3215875117065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCCCCTCTCATTCCT	3573	False	NA	17	True	ATTAAA	-14	NA	59553320	59667049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
m54284U_201201_044215/44958234/ccs	chr9	-	1627	10	NIC	ENSMUSG00000062270.15	novel	1540	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_9	2189.3605357628	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTGTGTGGCCGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	89996751	89973723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89996588
m54284U_201201_044215/44958752/ccs	chr17	-	3032	8	NNC	ENSMUSG00000023980.8	novel	2793	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_1	69.953920693612	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAGGGCCTCTCAAAT	NA	False	NA	-4	True	AATAAA	-31	NA	47813212	47799206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_47801447_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
m54284U_201201_044215/44958971/ccs	chr9	-	156	1	Intergenic	novelGene_4788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	56422247	56422091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_56422100_56422200
m54284U_201201_044215/45024143/ccs	chr3	-	1912	9	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-721	-65	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	98.20442645319	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCATCTCTCTGTTTTTC	NA	False	NA	-5	True	TATAAA	-22	NA	9675866	9503416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9675635
m54284U_201201_044215/45025348/ccs	chr2	-	189	1	Intergenic	novelGene_1057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAATGGCTTTTAA	NA	False	NA	NA	False	NA	NA	NA	127114185	127113996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_127114000_127114200
m54284U_201201_044215/45154363/ccs	chr3	+	189	1	Intergenic	novelGene_1435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTCAGTACCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	71896888	71897077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_71896900_71897100
m54284U_201201_044215/45155953/ccs	chr15	-	1937	11	NIC	ENSMUSG00000063354.8	novel	2750	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_10	121.107555503362	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACTGTCTTCTTGTAGA	8666	False	NA	-2	True	AATAAA	-21	NA	76501048	76496582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76497918_76497986_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500772
m54284U_201201_044215/45156501/ccs	chr9	+	3765	16	NNC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	-98	0	intron_retention	FALSE	canonical	2	15	junction_4	108.206099643227	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1705	False	NA	23	True	AATAAA	-23	NA	113760404	113806270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785143_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201201_044215/45220471/ccs	chr10	-	3395	13	NIC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	169.890324098291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	9981	False	NA	-46	True	AATAAA	-14	NA	80512127	80501160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80503167_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
m54284U_201201_044215/45222033/ccs	chr17	+	1617	12	NIC	ENSMUSG00000059714.14	novel	1825	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	49.9444319318153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATACTTCTTTCCTCACT	NA	False	NA	25	True	ATTAAA	-23	NA	36134238	36143683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_36134394_36134698_36134756_36135018_36135095_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
m54284U_201201_044215/45222371/ccs	chr5	-	1913	1	Intergenic	novelGene_2953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130368182	130366269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_130366300_130368200
m54284U_201201_044215/4522479/ccs	chr12	-	204	1	Intergenic	novelGene_6944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAATATTTCAATATTA	NA	False	NA	NA	False	NA	NA	NA	118353880	118353676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_118353700_118353900
m54284U_201201_044215/4523338/ccs	chr7	+	1120	7	Fusion	ENSMUSG00000097320.9_ENSMUSG00000046056.16	novel	1276	6	NA	NA	0	0	multi-exon	FALSE	canonical	1	1	junction_4	6.02771377334171	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTGGCTCACTGTGCT	526	False	NA	19	True	AATAAA	-21	NA	30429003	30455556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_+_30429280_30431838_30432187_30434128_30434194_30435240_30435388_30454233_30454306_30454426_30454472_30455389
m54284U_201201_044215/4524887/ccs	chr16	+	206	1	Intergenic	novelGene_8256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTACTTTATATTTTCA	NA	False	NA	NA	False	NA	NA	NA	39497068	39497274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_39497100_39497300
m54284U_201201_044215/45285476/ccs	chr6	-	3694	13	ISM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	0	6440	0	0	5prime_fragment	FALSE	canonical	3	29	junction_3	81.0826053410279	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTGTTGTTGTTGTA	NA	False	NA	-4	True	AATAAA	-20	NA	112673631	112603375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
m54284U_201201_044215/45288232/ccs	chr6	+	2282	12	NIC	ENSMUSG00000034930.17	novel	653	6	NA	NA	-169	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	15.2196045821291	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	1481	False	NA	18	True	ATTAAA	-18	NA	83119203	83129560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83119543_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
m54284U_201201_044215/45352006/ccs	chr11	-	2261	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	287.717453994945	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAAGTGGTGGTCTTCCT	8530	False	NA	-6	True	AATAAA	-16	NA	69572672	69563941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69564463_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
m54284U_201201_044215/45352544/ccs	chr3	+	3169	11	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	115	junction_2	127.746037120531	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072123	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89072414_89074341_89074512_89076004_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
m54284U_201201_044215/45353521/ccs	chr1	+	3810	10	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	32.7395257022742	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	4	True	AATAAA	-18	NA	90981175	91045037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91038076_91038170_91039877_91040020_91042317
m54284U_201201_044215/45418484/ccs	chr1	-	5662	22	NIC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	518	junction_13	37.1760535414412	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358229	135312210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
m54284U_201201_044215/45482665/ccs	chr10	+	1215	7	NIC	ENSMUSG00000054452.11	novel	1411	7	NA	NA	0	106	combination_of_known_junctions	FALSE	canonical	3	368	junction_6	1051.93209804098	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTTTATGATTTCTT	51	False	NA	17	True	AATAAA	-17	NA	81395321	81401997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401308
m54284U_201201_044215/45482735/ccs	chr17	-	4812	20	ISM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	-16	-143	0	133	intron_retention	FALSE	canonical	3	120	junction_19	10.4521068400644	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525905	56493673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408
m54284U_201201_044215/45483135/ccs	chr11	+	4259	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	182	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	5.20096144957834	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108811807	108841609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_108812020_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
m54284U_201201_044215/45483336/ccs	chr14	-	1507	6	NNC	ENSMUSG00000037722.9	novel	710	7	NA	NA	0	703	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	467.312058479128	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTGTGTTTTT	NA	False	NA	-1	True	ATTAAA	-30	NA	45626250	45614907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_45615944_45618389_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
m54284U_201201_044215/45547531/ccs	chr9	-	626	3	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	7420	junction_2	85368.5	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275501	78274333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_78274577_78275002_78275151_78275266
m54284U_201201_044215/45678766/ccs	chr5	-	259	1	Intergenic	novelGene_2967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAATCTTAAAAAAAA	5267	False	NA	NA	False	NA	NA	NA	134683377	134683118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_134683100_134683400
m54284U_201201_044215/45680995/ccs	chr15	+	3356	21	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	75.3023240013215	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775634	57833463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
m54284U_201201_044215/45745413/ccs	chr10	+	2176	9	NIC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	8904	junction_3	880.241577281487	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919174	127926142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
m54284U_201201_044215/45746485/ccs	chr5	+	3282	3	NNC	ENSMUSG00000046079.17	novel	492	3	NA	NA	-256	-480	intron_retention	FALSE	canonical	3	13	junction_1	271.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTGCAGTTTTTTGGT	4635	False	NA	16	True	ATTAAA	-16	NA	105848398	105962596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_105848529_105880095_105880241_105959589
m54284U_201201_044215/45809685/ccs	chr7	-	4317	21	NIC	ENSMUSG00000031024.14	novel	4255	20	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_20	42.4156810625504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAAGAGTCTTATTGTGT	NA	False	NA	-7	True	AATAAA	-17	NA	109302815	109123126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264_109216355_109302744
m54284U_201201_044215/45810099/ccs	chr12	-	4608	16	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	188.655052646063	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8772	False	NA	-24	True	AATAAA	-25	NA	101049961	101005770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
m54284U_201201_044215/45877217/ccs	chr4	-	5686	37	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_17	39.3689810214421	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
m54284U_201201_044215/4588439/ccs	chr1	+	3142	21	NNC	ENSMUSG00000040782.13	novel	5116	20	NA	NA	-130	346	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	106.317637295041	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGGTGAGTAATTTTA	NA	False	NA	NA	False	AAGAAA	-3	NA	159059759	159173016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076837_159077592_159077713_159080117_159080187_159086216_159086313_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
m54284U_201201_044215/4589028/ccs	chr12	+	3348	18	NNC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_11	112.928461294052	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	736	False	NA	NA	False	ATTAAA	-21	NA	111540956	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
m54284U_201201_044215/4589035/ccs	chr11	-	158	1	Intergenic	novelGene_5741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAAAGTTT	NA	False	NA	NA	False	NA	NA	NA	23307471	23307313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23307300_23307500
m54284U_201201_044215/4589282/ccs	chr17	-	1795	7	NIC	ENSMUSG00000056121.17	novel	1939	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	104.450945424156	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGGAGTCTTGAGTTTTT	NA	False	NA	-6	True	AATAAA	-13	NA	78725525	78685313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78725261
m54284U_201201_044215/4589844/ccs	chrX	+	3947	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	291.172156725314	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201201_044215/458993/ccs	chr12	+	2955	8	NIC	ENSMUSG00000021033.12	novel	1656	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	476	junction_5	37.1054756947086	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	13	True	NA	NA	NA	87194491	87211497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87208328_87208813_87208867_87209761_87209812_87210477
m54284U_201201_044215/4589992/ccs	chr9	-	1914	5	NNC	ENSMUSG00000032199.14	novel	2200	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	1008.45361197231	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCCCGAGCTCATGGCG	2470	False	NA	-33	True	AATAAA	-15	NA	71393217	71385752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_71386360_71386611_71386823_71388623_71388829_71390448_71391088_71392965
m54284U_201201_044215/45940770/ccs	chr12	-	148	1	Intergenic	novelGene_6563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	9157352	9157204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_9157200_9157400
m54284U_201201_044215/45941021/ccs	chr2	+	5333	3	NIC	ENSMUSG00000035829.14	novel	646	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTCCTTTGTTCTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	28336877	28345517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_28336909_28337896_28337995_28340313
m54284U_201201_044215/45943275/ccs	chr5	+	2379	10	NNC	ENSMUSG00000029247.18	novel	2345	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_1	1273.38202350189	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77099516_77099615_77099683_77104395_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201201_044215/459840/ccs	chr9	+	2659	1	Intergenic	novelGene_5001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACACCAGAAGAAGAGGC	NA	False	NA	NA	False	NA	NA	NA	95330937	95333596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_95330900_95333600
m54284U_201201_044215/460018/ccs	chr14	+	1468	5	NIC	ENSMUSG00000021868.8	novel	1549	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_3	185.642633842552	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCTCTGGTTTTGGA	376	False	NA	NA	False	AATAAA	-18	NA	25694577	25700892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_25694848_25695896_25695928_25696427_25696517_25698689_25698766_25699890
m54284U_201201_044215/460056/ccs	chr11	+	205	1	Intergenic	novelGene_6214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAACCAAAACCTCTGTG	NA	False	NA	NA	False	NA	NA	NA	94479870	94480075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94479900_94480100
m54284U_201201_044215/46007420/ccs	chr6	+	4021	24	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	252.33368252097	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCAGCCTCCTTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	87864909	87890577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884359_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
m54284U_201201_044215/46007491/ccs	chr5	-	196	1	Intergenic	novelGene_2454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTTCAAAGAAAAGTGAC	NA	False	NA	NA	False	NA	NA	NA	5528607	5528411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_5528400_5528600
m54284U_201201_044215/46008336/ccs	chr2	-	2885	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	947.068276835231	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022116	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
m54284U_201201_044215/46008747/ccs	chr11	+	1726	5	NNC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_4	395.272374445774	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTCTGTGATTTCTA	NA	False	NA	34	True	ATTAAA	-17	NA	5470994	5475893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474751
m54284U_201201_044215/46071955/ccs	chr11	+	3812	5	NNC	ENSMUSG00000020491.16	novel	3866	5	NA	NA	0	-99	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	14.8492424049175	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTTAAGCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-40	NA	58758041	58774015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_58758136_58759640_58759833_58767519_58767692_58769601_58769695_58770754
m54284U_201201_044215/46073573/ccs	chr11	-	166	1	Intergenic	novelGene_6033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAGTGCAAAACC	2620	False	NA	NA	False	NA	NA	NA	76301558	76301392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_76301400_76301600
m54284U_201201_044215/46137441/ccs	chrX	-	3720	7	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1225	junction_3	151.423706495677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759798	52744867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52752016_52752989_52753824_52759728
m54284U_201201_044215/46203681/ccs	chr11	+	4523	26	NNC	ENSMUSG00000020290.15	novel	6004	25	NA	NA	-449	-574	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	455.037053436311	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACTTAAAATTATTCCT	NA	False	NA	20	True	AATAAA	-26	NA	23205591	23247023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_23205868_23206608_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
m54284U_201201_044215/46205741/ccs	chr11	-	1727	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111691	-760	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	32.3412922387691	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTACTGTGTGCTTAGTT	1419	False	NA	-5	True	NA	NA	NA	76178203	76148783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178031
m54284U_201201_044215/46269902/ccs	chr2	-	2829	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	383	junction_15	737.860411025805	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022132	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
m54284U_201201_044215/46269969/ccs	chr16	+	6013	33	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_24	32.491690644494	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTTCACTGTCGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	94171625	94270079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_94171721_94204172_94204228_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
m54284U_201201_044215/46334240/ccs	chr13	+	167	1	Intergenic	novelGene_7281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTAAGTGGCTCTTTG	NA	False	NA	NA	False	NA	NA	NA	100977658	100977825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_100977700_100977800
m54284U_201201_044215/46334944/ccs	chr19	-	6820	55	NNC	ENSMUSG00000048612.17	novel	6633	54	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	26	junction_16	31.7375046969603	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATGTTTGTCCTCTATTC	8856	False	NA	-1	True	AATAAA	-20	NA	38031847	37887675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37915443_37916801_37916859_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
m54284U_201201_044215/46335401/ccs	chr4	+	494	2	Intergenic	novelGene_1856	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	71	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	16	True	NA	NA	NA	48513813	48519021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_48514080_48518793
m54284U_201201_044215/46336795/ccs	chr2	+	2178	9	NNC	ENSMUSG00000049401.11	novel	2449	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_7	18.4306131205666	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGCCGTGTTCTGTTTG	NA	False	NA	22	True	AATAAA	-22	NA	180231254	180237629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000_180236947_180236973_180237082_180237108
m54284U_201201_044215/46465972/ccs	chr5	-	2399	13	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	59	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_4	419.250720532078	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782406	24770342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
m54284U_201201_044215/4653172/ccs	chr6	-	178	1	Intergenic	novelGene_3369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAATCTA	4229	False	NA	NA	False	NA	NA	NA	86512060	86511882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_86511900_86512100
m54284U_201201_044215/4653174/ccs	chr19	+	2242	9	NNC	ENSMUSG00000025227.15	novel	2051	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	100.850136341008	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4253	False	NA	13	True	AGTAAA	-13	NA	46345373	46363691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360620_46360815_46362884
m54284U_201201_044215/4653196/ccs	chr7	-	3594	15	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_11	110.349745475604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9322	False	NA	-8	True	AATAAA	-20	NA	44804008	44791258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44796946_44797148_44797227_44797307_44797487_44798037_44799191_44803815
m54284U_201201_044215/46532492/ccs	chr14	-	5647	29	NIC	ENSMUSG00000032849.15	novel	5715	31	NA	NA	-230	-80	combination_of_known_splicesites	FALSE	canonical	0	0	junction_28	54.4243999151341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTATTTCATTTCTAT	NA	False	NA	-6	True	ATTAAA	-17	NA	118943861	118720183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_118721853_118727910_118728046_118737377_118737484_118738119_118738293_118745004_118745095_118753844_118754001_118763623_118763816_118765362_118765464_118766378_118766490_118767269_118767390_118771403_118771555_118790695_118790776_118832173_118832321_118834091_118834187_118834550_118834589_118834905_118835047_118836725_118836936_118841568_118841666_118848848_118848936_118849129_118849225_118852542_118852735_118853777_118853868_118856300_118856403_118864863_118865114_118867029_118867156_118868390_118868555_118869509_118869600_118891561_118891787_118943447
m54284U_201201_044215/4653315/ccs	chr12	-	4039	3	NNC	ENSMUSG00000021047.8	novel	7154	5	NA	NA	-407	-42638	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGCTACAAGTGCAATA	NA	False	NA	NA	False	NA	NA	NA	46866119	46810000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_46813175_46863668_46863813_46865398
m54284U_201201_044215/4653832/ccs	chr3	+	4244	24	NNC	ENSMUSG00000028059.17	novel	3065	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	88.4969214378091	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8618	False	NA	15	True	ATTAAA	-17	NA	88522673	88555359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88522706_88522788_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
m54284U_201201_044215/4654086/ccs	chr12	+	3181	3	Fusion	ENSMUSG00000113964.2_ENSMUSG00000114041.3	novel	567	4	NA	NA	-288	742	intron_retention	FALSE	canonical	2	8	junction_1	2.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGTGAGTTTCCTGT	NA	False	NA	NA	False	AATAAA	-3	NA	20246628	20328771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr12_+_20247044_20325015_20326942_20327931
m54284U_201201_044215/4654329/ccs	chr14	-	2751	9	NIC	ENSMUSG00000041028.17	novel	2573	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	1786.95934131138	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTATTGCTGTACTT	NA	False	NA	-18	True	AATAAA	-11	NA	36857096	36842780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856743
m54284U_201201_044215/4654540/ccs	chr2	+	8464	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	120.947294981183	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962843	52012395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201201_044215/4654658/ccs	chr2	-	1872	12	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	0	-500	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_6	170.216633967832	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGACGATGGTGGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	152174332	152158753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165241_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
m54284U_201201_044215/4655088/ccs	chr8	+	1211	4	NIC	ENSMUSG00000031917.13	novel	3036	5	NA	NA	0	371	intron_retention	FALSE	canonical	3	714	junction_3	58.9594964549581	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATATGTGTGAGTGT	NA	False	NA	28	True	AATAAA	-22	NA	107783532	107785669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_107783623_107783724_107784044_107784678_107784820_107785008
m54284U_201201_044215/46597305/ccs	chr8	-	3631	19	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	0	-183	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_16	407.303675346316	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438299	80410273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80432124_80432216_80433862_80433949_80435051_80435182_80438171
m54284U_201201_044215/46661815/ccs	chr13	+	4545	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	279	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	74.1676029903443	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8996	False	NA	14	True	AATAAA	-20	NA	97208429	97266023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_97208497_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
m54284U_201201_044215/46662517/ccs	chr15	-	2053	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	63.9518568925094	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713764	75626278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75713698
m54284U_201201_044215/46663517/ccs	chr17	-	5518	16	NIC	ENSMUSG00000015659.13	novel	4007	17	NA	NA	0	1625	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	22.4376667434225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTGTTCAATTCTTA	2593	False	NA	-12	True	NA	NA	NA	6130016	6090845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_6094526_6095919_6096064_6099105_6099289_6100237_6100336_6100999_6101095_6101964_6102107_6106881_6107033_6110477_6110641_6115223_6115353_6116945_6117068_6117803_6117936_6119573_6119664_6121027_6121165_6122108_6122146_6124430_6124523_6129893
m54284U_201201_044215/46664486/ccs	chr1	-	1331	10	NIC	ENSMUSG00000016481.16	novel	1651	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_9	50.3432661280975	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	False	NA	-7	True	AATAAA	-13	NA	194813869	194786103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
m54284U_201201_044215/46727448/ccs	chr6	-	3207	10	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	48.3600181764305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGCTAAGGTTGTTGT	NA	False	NA	NA	False	AATAAA	-34	NA	71417621	71367450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_71368962_71370086_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
m54284U_201201_044215/46727745/ccs	chr8	-	1048	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	594.120324513478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	False	NA	-22	True	ATTAAA	-29	NA	121394826	121384571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121386697_121386757_121387522_121387600_121394495
m54284U_201201_044215/46728519/ccs	chr5	-	4907	17	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	158	junction_5	28.7793328623163	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211737	9168867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
m54284U_201201_044215/46729446/ccs	chr14	+	636	4	NNC	ENSMUSG00000115092.2	novel	415	3	NA	NA	-10606	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	4.24264068711928	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAACACGCCACCCTCC	NA	False	NA	6	True	AATAAA	-22	NA	76753425	76768186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_76753538_76764032_76764202_76766569_76766669_76767930
m54284U_201201_044215/46792887/ccs	chr4	+	5888	10	NIC	ENSMUSG00000007613.16	novel	5756	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	82.4685499350817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAACATTCTTTTCTGGA	0	True	NA	33	True	AATAAA	-24	NA	47353221	47414931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_47353397_47382912_47383045_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
m54284U_201201_044215/46793650/ccs	chr15	-	4035	30	ISM	ENSMUSG00000022565.16	ENSMUST00000071869.12	14917	32	90	11935	90	3702	5prime_fragment	FALSE	canonical	2	21	junction_29	9.92420742349444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTGGGGCCGTGTGGCT	NA	False	NA	NA	False	NA	NA	NA	76093275	76067108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76093164
m54284U_201201_044215/46795572/ccs	chr8	-	176	1	Intergenic	novelGene_4383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATGTGCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	86050372	86050196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_86050200_86050400
m54284U_201201_044215/46795598/ccs	chr9	-	4090	17	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_16	264.803228832278	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526585	108480145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108523130_108523296_108526427
m54284U_201201_044215/46858751/ccs	chr2	+	2773	19	NIC	ENSMUSG00000027380.11	novel	531	6	NA	NA	-86	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	2.77999911182151	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGATTACACAGGCGGAAA	NA	False	NA	NA	False	AATAAA	-18	NA	127680709	127965793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_127680903_127691112_127691210_127709202_127709287_127713181_127713269_127714029_127714129_127719663_127719779_127720676_127720764_127722345_127722419_127726325_127726459_127753349_127753385_127814451_127814569_127820592_127820747_127851996_127852087_127876732_127876843_127886263_127886376_127917766_127917855_127928278_127928350_127947596_127947699_127964867
m54284U_201201_044215/46859276/ccs	chr11	-	4185	19	NNC	ENSMUSG00000057897.15	novel	4023	21	NA	NA	26420	0	intron_retention	FALSE	canonical	2	5	junction_18	42.1020585403295	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAAATTGCTTCCAGTA	546	False	NA	NA	False	NA	NA	NA	5989118	5919643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5932500_5932573_5932720_5932759_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_5988561
m54284U_201201_044215/46925304/ccs	chr12	-	3933	11	NIC	ENSMUSG00000020547.6	novel	1871	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	931	junction_8	85.7956292593043	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATGGTCAGAGCGTGT	NA	False	NA	-11	True	AATAAA	-21	NA	36206824	36141833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
m54284U_201201_044215/46926032/ccs	chr5	-	185	1	Intergenic	novelGene_2891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAAAGAGCT	4120	False	NA	NA	False	NA	NA	NA	123861384	123861199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123861200_123861400
m54284U_201201_044215/46990571/ccs	chr12	+	3751	27	NNC	ENSMUSG00000020608.8	novel	5603	27	NA	NA	0	204	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_25	128.991198497963	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTTCCAGGTTG	4536	False	NA	15	True	AATAAA	-16	NA	11316105	11368248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364666_11366619_11366718_11367770
m54284U_201201_044215/47056272/ccs	chr7	+	3481	20	NNC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	45.4790445183791	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640867	140652313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_140641114_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
m54284U_201201_044215/47186879/ccs	chr7	+	2124	7	NIC	ENSMUSG00000058454.16	novel	2556	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	154.04265282346	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_143384003_143390374_143390467_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
m54284U_201201_044215/47187185/ccs	chr7	-	228	1	Intergenic	novelGene_4162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTTAACCAGGATTT	NA	False	NA	NA	False	NA	NA	NA	140737756	140737528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_140737500_140737800
m54284U_201201_044215/4718741/ccs	chr1	-	2353	16	NNC	ENSMUSG00000046337.18	novel	2286	15	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_5	46.2106288879758	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTCTGGAGTTCCTTC	NA	False	NA	-1	True	ATTAAA	-18	NA	36722212	36601776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_36602102_36603410_36603564_36603911_36603990_36617599_36617726_36624996_36625085_36639203_36639302_36639488_36639666_36639947_36640033_36647497_36647613_36671500_36671586_36674247_36674354_36683290_36683444_36695891_36696015_36698444_36698507_36699815_36700131_36721948
m54284U_201201_044215/4720152/ccs	chr7	-	2726	16	NIC	ENSMUSG00000030872.15	novel	4915	17	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	7	junction_1	208.082312772828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTGGTGTTGAGTCCA	NA	False	NA	-5	True	AATAAA	-14	NA	121620410	121587987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_121589025_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
m54284U_201201_044215/4720724/ccs	chr17	+	1639	7	NNC	ENSMUSG00000024084.9	novel	864	3	NA	NA	10990	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	82.476259210353	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAATAACTATTGCCTC	NA	False	NA	-2	True	AATATA	-14	NA	79370606	79397807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_79370670_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
m54284U_201201_044215/4721412/ccs	chr8	+	1610	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	127.266998428064	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAACTTTCTTTAGCAC	NA	False	NA	39	True	AATAAA	-26	NA	96442542	96445638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443607_96444548_96444730_96444820_96444964_96445103
m54284U_201201_044215/47252179/ccs	chr10	-	174	1	Intergenic	novelGene_5552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCCGGGTGGTGGTGGCG	NA	False	NA	NA	False	NA	NA	NA	116960516	116960342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_116960300_116960500
m54284U_201201_044215/47317050/ccs	chr1	+	5973	15	ISM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	18	24766	0	624	5prime_fragment	FALSE	canonical	3	127	junction_3	10.2869542903344	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTTTCACATGATGC	NA	False	NA	NA	False	AATAAA	-25	NA	6284886	6322106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499
m54284U_201201_044215/47317651/ccs	chr6	+	2097	12	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	45.7221215244242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	False	NA	11	True	ATTAAA	-21	NA	146626492	146678054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_146626546_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
m54284U_201201_044215/47318023/ccs	chr7	+	2040	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	232.072472846439	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4743239_4744778_4744981_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
m54284U_201201_044215/47318324/ccs	chr4	+	2719	6	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	1507	117	intron_retention	FALSE	canonical	3	1505	junction_3	236.461751663985	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGACCCCCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	156323182	156327231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156323760_156323846_156324627_156324713_156324825_156325056_156325959_156326117_156326258_156327022
m54284U_201201_044215/47319318/ccs	chr6	-	3004	1	ISM	ENSMUSG00000030256.12	ENSMUST00000032386.11	6133	5	3540	772	3284	-772	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTCTTGAGACACTCCC	NA	False	NA	NA	False	AATACA	-37	NA	145807744	145804740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_145804700_145807700
m54284U_201201_044215/47383048/ccs	chr13	-	2675	16	NNC	ENSMUSG00000021461.18	novel	2995	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_15	36.5910735927038	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGAGTCCTTGTCCTCCT	NA	False	NA	-1	True	AGTAAA	-18	NA	63579539	63459948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63553910_63554070_63579263
m54284U_201201_044215/47384059/ccs	chr1	+	221	1	Intergenic	novelGene_225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATATGCACATTTGAAA	9854	False	NA	NA	False	NA	NA	NA	86243883	86244104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_86243900_86244100
m54284U_201201_044215/47448139/ccs	chr10	-	1733	12	NIC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	52.8487628572059	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	-2	True	AATAAA	-23	NA	30476691	30410710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30470110_30470185_30473735_30473802_30476585
m54284U_201201_044215/47448564/ccs	chr7	-	190	1	Intergenic	novelGene_3759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAAGCATTTTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	29525017	29524827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29524800_29525000
m54284U_201201_044215/47448847/ccs	chr17	+	3433	17	NNC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_1	572.661573133513	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	499	False	NA	36	True	AATAAA	-20	NA	56610399	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56610562_56612159_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201201_044215/47449315/ccs	chr17	+	1915	7	NNC	ENSMUSG00000024160.17	novel	1949	7	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	67.8052767530342	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTCTATTGTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	25105838	25111123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_25106231_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
m54284U_201201_044215/47513640/ccs	chr1	-	2310	7	NIC	ENSMUSG00000026492.12	novel	2449	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	27.6008252694653	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTGTATATGTGTGT	7928	False	NA	NA	False	AATAAA	-15	NA	179373782	179355619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179373386
m54284U_201201_044215/47516485/ccs	chr4	+	187	1	Intergenic	novelGene_1852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTATTCTGTTGGTTGA	NA	False	NA	NA	False	NA	NA	NA	46570457	46570644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_46570500_46570600
m54284U_201201_044215/47579987/ccs	chr2	-	621	4	NNC	ENSMUSG00000086748.2	novel	1020	4	NA	NA	8800	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_3	186.111674957687	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGTGTTCATTCTGT	NA	False	NA	-13	True	AATAAA	-14	NA	10370052	10344093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_10344284_10346331_10346540_10350061_10350197_10369964
m54284U_201201_044215/47644955/ccs	chr13	+	2405	6	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	90752	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	80.650852444348	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	36037546	36058046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_36037615_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
m54284U_201201_044215/47645053/ccs	chr3	-	486	5	Fusion	ENSMUSG00000010538.15_ENSMUSG00000103766.6	novel	600	2	NA	NA	0	3316	multi-exon	FALSE	canonical	3	15	junction_1	78.2719617743161	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCACCTCTGCCTGG	NA	False	NA	NA	False	NA	NA	NA	88204145	88186747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr3_-_88186818_88187238_88187460_88194404_88194525_88202697_88202758_88204130
m54284U_201201_044215/47645867/ccs	chr18	-	3113	1	Intergenic	novelGene_8991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGTTAC	NA	False	NA	NA	False	NA	NA	NA	65742268	65739155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_65739200_65742300
m54284U_201201_044215/47646019/ccschrUn	chrUn_JH584304v1	-	2895	7	Intergenic	novelGene_9770	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	256.761508451369	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
m54284U_201201_044215/47710208/ccs	chr4	-	6194	1	FSM	ENSMUSG00000078234.7	ENSMUST00000105031.4	7807	1	406	1207	406	-1207	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTGCAGCGTCGTTCT	NA	False	NA	NA	False	NA	NA	NA	139694931	139688737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_139688700_139694900
m54284U_201201_044215/47710283/ccs	chr13	-	2452	14	NIC	ENSMUSG00000025878.17	novel	2931	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	49.8302443746553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATCTTATTTCAATAG	NA	False	NA	NA	False	AATATA	-12	NA	55248108	55176107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55176532_55177228_55177272_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
m54284U_201201_044215/47710795/ccs	chr11	+	4281	6	ISM	ENSMUSG00000020515.14	ENSMUST00000020822.12	2035	7	-183	0	-183	0	intron_retention	FALSE	canonical	3	691	junction_3	54.6091567413378	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGAAGTGTGGTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	57994795	58009420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_57995035_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090
m54284U_201201_044215/47710830/ccs	chr10	-	3812	21	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	0	-958	intron_retention	FALSE	canonical	3	1016	junction_14	79.2572394169769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTCACTGGGACAACAT	NA	False	NA	-29	True	AATAAA	-16	NA	77845570	77823738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
m54284U_201201_044215/47778064/ccs	chr16	-	176	1	Intergenic	novelGene_8146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAACAAGGTATAACT	NA	False	NA	NA	False	NA	NA	NA	20631623	20631447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20631400_20631600
m54284U_201201_044215/47778275/ccs	chr5	-	194	1	Intergenic	novelGene_2633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATATTTTATTTACTGCA	4236	False	NA	NA	False	NA	NA	NA	77376885	77376691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77376700_77376900
m54284U_201201_044215/47778637/ccs	chr1	-	2879	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	127	junction_3	793.646191538616	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287401	128259326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_128259789_128261253_128261394_128262499_128262625_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
m54284U_201201_044215/47841512/ccs	chr18	+	2073	9	NIC	ENSMUSG00000036880.11	novel	1516	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	191	junction_7	16.7779617355625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACCTTTTCTTGTTGGT	NA	False	NA	13	True	AATAAA	-17	NA	74912267	74939279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74932246_74934367_74934439_74937071_74937227_74938925
m54284U_201201_044215/47843748/ccs	chr13	-	4881	26	NIC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_14	64.1266746370027	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGACTTTGTGCCTTTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	98951716	98859910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891762_98892073_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
m54284U_201201_044215/4786437/ccs	chr2	+	250	1	Intergenic	novelGene_1271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTCCTGGGTCAGTTCC	6048	False	NA	NA	False	NA	NA	NA	168676565	168676815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168676600_168676800
m54284U_201201_044215/47907462/ccs	chr5	-	175	1	Intergenic	novelGene_2815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTAGCCGGGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	116165661	116165486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_116165500_116165700
m54284U_201201_044215/47908436/ccs	chr3	-	2607	10	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2549	junction_6	101.739803687254	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352514	108333927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_108334298_108334575_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
m54284U_201201_044215/47908935/ccs	chr11	+	1779	4	NNC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_3	672.828028217876	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCATGGTTGTCCTTTT	6595	False	NA	21	True	AATAAA	-15	NA	87938543	87942316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87938859_87939315_87939501_87939868_87940922_87942090
m54284U_201201_044215/47909502/ccs	chr14	+	855	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_5	1503.09389770105	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	117	False	NA	22	True	AATAAA	-18	NA	101891429	101933561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101928007_101928084_101932594_101932654_101933337
m54284U_201201_044215/48037935/ccs	chr1	+	194	1	Intergenic	novelGene_295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGAGAAGACATGAAG	NA	False	NA	NA	False	NA	NA	NA	130897575	130897769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_130897600_130897800
m54284U_201201_044215/48038109/ccs	chr7	+	1632	4	NNC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	100.839806954727	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	False	NA	26	True	AATAAA	-19	NA	16044319	16052130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_16044384_16046050_16046340_16047551_16047743_16051042
m54284U_201201_044215/48038357/ccs	chr4	-	3053	1	Antisense	novelGene_ENSMUSG00000065999.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTCATACCTACAATATA	NA	False	NA	NA	False	NA	NA	NA	147671930	147668877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_147668900_147671900
m54284U_201201_044215/48039060/ccs	chrX	-	4670	13	NIC	ENSMUSG00000025531.15	novel	4868	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_11	50.7304286290673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTGTAATGGCTTATT	NA	False	NA	-9	True	AATAAA	-16	NA	112095214	111950289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112069200_112069268_112095137
m54284U_201201_044215/48103853/ccs	chrX	+	2186	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	82.2445134948223	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3176	False	NA	NA	False	AATAAA	-17	NA	151922976	151954939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_151923572_151924359_151924394_151926971_151927000_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
m54284U_201201_044215/48104011/ccs	chr14	+	2177	13	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_9	86.6052667118012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTATTACATTTTAGA	NA	False	NA	11	True	AATAAA	-20	NA	20398257	20433559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20428467_20428592_20428831_20428952_20431816_20431890_20432984
m54284U_201201_044215/48105795/ccs	chr12	+	234	1	Intergenic	novelGene_6631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAAAGCCTTGGGTAG	NA	False	NA	NA	False	AAAACA	-31	NA	52020388	52020622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_52020400_52020600
m54284U_201201_044215/48171518/ccs	chr15	+	2731	11	NIC	ENSMUSG00000022351.15	novel	2758	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	238.536559042844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTCTTTTGGTTTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	59186925	59203041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_59187979_59189644_59189898_59193162_59193344_59194715_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
m54284U_201201_044215/48236064/ccs	chr5	-	1831	1	Intergenic	novelGene_2908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATGGGATGGTGGAGC	NA	False	NA	NA	False	NA	NA	NA	124726490	124724659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124724700_124726500
m54284U_201201_044215/48236542/ccs	chr11	-	3223	10	NIC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	16927	junction_7	1895.24750655715	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_33102853_33103985_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
m54284U_201201_044215/48302167/ccs	chr5	+	1425	10	NIC	ENSMUSG00000029152.14	novel	1523	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_1	326.119874953224	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTCATTCACATTTT	NA	False	NA	15	True	AATAAA	-16	NA	73450149	73471284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_73450320_73451308_73451354_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
m54284U_201201_044215/48365738/ccs	chr4	+	1954	21	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_9	178.38710715744	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	5	True	NA	12	True	AATAGA	-27	NA	34614973	34660167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34640873_34640977_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
m54284U_201201_044215/48366545/ccs	chr3	-	1132	7	ISM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	835	4	0	0	3prime_fragment	FALSE	canonical	3	4041	junction_4	350.10446853602	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTATAAGTTTCATAC	NA	False	NA	-24	True	AATAAA	-12	NA	105866580	105850017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463
m54284U_201201_044215/48431908/ccs	chr1	+	2198	13	ISM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	1454	0	0	0	3prime_fragment	FALSE	canonical	2	4	junction_7	13.8774397254441	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGAGTTCTAGGTTA	6425	False	NA	NA	False	NA	NA	NA	74415815	74425221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
m54284U_201201_044215/48432254/ccs	chr7	+	1821	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-274	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.3245957266899	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTGTTTTGTTTTGT	NA	False	NA	17	True	CATAAA	-21	NA	43362548	43376958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43362686_43363202_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
m54284U_201201_044215/48433136/ccs	chr2	+	2461	18	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-117	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	760.951812468867	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121228	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_157121256_157123863_157124082_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
m54284U_201201_044215/48496880/ccs	chr4	+	3163	12	NIC	ENSMUSG00000028759.14	novel	3361	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.9615581863273	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCAGTACCTGTCCT	5069	False	NA	42	True	AATAAA	-40	NA	137944441	137970481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137944606_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
m54284U_201201_044215/48497674/ccs	chr9	+	5519	32	NIC	ENSMUSG00000033577.19	novel	7871	33	NA	NA	0	802	combination_of_known_junctions	FALSE	canonical	3	51	junction_13	8.67484072490656	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGTGTCTTTATTTGT	4854	False	NA	30	True	AATAAA	-33	NA	80072312	80216686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80214241_80214461_80214953
m54284U_201201_044215/4849842/ccs	chrX	+	3111	16	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_12	410.497551758838	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563169_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201201_044215/4850065/ccs	chr5	-	189	1	Intergenic	novelGene_2713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATGGAGATGAGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	104294499	104294310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_104294300_104294500
m54284U_201201_044215/4850067/ccs	chr10	+	1130	1	FSM	ENSMUSG00000069622.6	ENSMUST00000092511.6	630	1	-119	-381	-119	381	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGACTTTATTGATACAA	1383	False	NA	NA	False	NA	NA	NA	59231457	59232587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_59231500_59232600
m54284U_201201_044215/4850449/ccs	chrX	+	2574	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	947.11987690286	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139706	74153383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
m54284U_201201_044215/4850552/ccs	chr6	-	2398	10	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	0	combination_of_known_splicesites	FALSE	canonical	3	151	junction_9	1239.05241571488	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8571	False	NA	-24	True	AATAAA	-16	NA	145021824	144944883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_145021614
m54284U_201201_044215/4850751/ccs	chr4	+	2451	16	NNC	ENSMUSG00000028224.15	novel	2533	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	53.2213825032341	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGTGTGGTAACGT	-45	True	NA	9	True	AATAAA	-15	NA	15957924	15992589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_15958111_15962310_15962445_15963771_15963921_15964328_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
m54284U_201201_044215/4850857/ccs	chr1	+	9116	14	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_5	477.144253924591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555675	118612898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
m54284U_201201_044215/4851979/ccs	chr1	+	2278	6	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	21711	0	intron_retention	FALSE	canonical	2	8	junction_1	77.9717897704035	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165979746	165994079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_165980032_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
m54284U_201201_044215/48562799/ccs	chr13	+	465	4	NNC	ENSMUSG00000114426.2	novel	1561	3	NA	NA	-9011	721	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_3	16.3299316185545	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGACTTAGCTCCATTAT	5534	False	NA	11	True	NA	NA	NA	66711973	66724696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_66712084_66720982_66721110_66721308_66721370_66724529
m54284U_201201_044215/48563197/ccs	chr17	-	1886	2	Antisense	novelGene_ENSMUSG00000034265.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGTGGTGTTGTGTCTTT	NA	False	NA	1	True	NA	NA	NA	5577512	5572998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_5574721_5577348
m54284U_201201_044215/48563221/ccs	chr10	-	1755	11	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_7	88.8560633834293	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCTGTTTAATGTTTA	NA	False	NA	-18	True	AATAAA	-21	NA	89568157	89547832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561816_89562498_89562623_89564015_89564085_89564761_89564880_89568035
m54284U_201201_044215/48564324/ccs	chr17	+	2852	15	NIC	ENSMUSG00000002833.12	novel	2270	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	635	junction_14	77.6569181642918	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTATTGGCTTAGGTGC	NA	False	NA	NA	False	TATAAA	-25	NA	56386637	56407607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
m54284U_201201_044215/48628452/ccs	chr15	-	205	1	Intergenic	novelGene_7687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTAGTTGTAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	37282854	37282649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_37282600_37282900
m54284U_201201_044215/48628616/ccs	chr10	-	6124	27	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	716	junction_19	69.7611309012073	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGAGAGTTTTCTCTT	NA	False	NA	-7	True	AATAAA	-26	NA	117628610	117586528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
m54284U_201201_044215/48629615/ccs	chr9	+	4131	23	NIC	ENSMUSG00000032485.15	novel	619	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	21.4736528936053	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGGCTGAAGTTCTTGT	NA	False	NA	11	True	AATAAA	-23	NA	110162363	110214018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_110162418_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
m54284U_201201_044215/48695936/ccs	chr4	+	3180	10	NIC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	209.106033708579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_136039059_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
m54284U_201201_044215/48760517/ccs	chr7	-	1298	7	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	635.883025581138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	False	NA	-1	True	NA	NA	NA	139696328	139685622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139696219
m54284U_201201_044215/48825013/ccs	chr18	-	3516	8	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_4	41.1701298496463	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602519_70602849_70604743_70605051_70605361
m54284U_201201_044215/48825650/ccs	chr1	-	2314	11	NIC	ENSMUSG00000026341.17	novel	2554	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	930.204063633351	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTTTTTCTTCGTG	NA	False	NA	-4	True	AATAAA	-20	NA	125363444	125320642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_125321828_125322804_125322889_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
m54284U_201201_044215/48827094/ccs	chr16	-	1687	3	NNC	ENSMUSG00000097768.3	novel	1580	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	9	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACACCTTTAAATAATA	6571	False	NA	NA	False	AATAAA	-28	NA	93591789	93589023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_93590271_93590397_93590505_93591456
m54284U_201201_044215/48892598/ccs	chr2	-	2076	6	ISM	ENSMUSG00000053166.15	ENSMUST00000065438.13	3702	12	92540	0	39146	0	3prime_fragment	FALSE	canonical	2	10	junction_5	4.63033476111609	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTATCCTTGTGGTTACT	NA	False	NA	-5	True	NA	NA	NA	164984233	164953426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164983973
m54284U_201201_044215/48956131/ccs	chr3	-	180	1	Intergenic	novelGene_1661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAGACAAAACAAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	121944377	121944197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_121944200_121944400
m54284U_201201_044215/48956461/ccs	chr6	-	176	1	Intergenic	novelGene_3348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAATAAGTAAACC	1581	False	NA	NA	False	NA	NA	NA	83843541	83843365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_83843400_83843500
m54284U_201201_044215/48958092/ccs	chr3	-	4085	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	581	junction_24	64.5165784034529	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTTTTATGTGTCCTG	1838	False	NA	NA	False	AATAAA	-16	NA	27207999	27151374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207851
m54284U_201201_044215/49021103/ccs	chr17	-	3632	5	NIC	ENSMUSG00000014769.11	novel	1758	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	4315	junction_3	337.796073837456	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTTCTTACACTGTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	15718560	15696220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_15696468_15697576_15697684_15710417_15713442_15714677_15714786_15718414
m54284U_201201_044215/49022206/ccs	chr11	+	3644	19	NIC	ENSMUSG00000020454.18	novel	3565	18	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	10	junction_1	76.7602488431945	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGGTACTGTGTTTATT	3573	False	NA	14	True	ATTAAA	-30	NA	3152391	3194588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
m54284U_201201_044215/49087053/ccs	chr7	-	2346	11	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	0	474	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_4	191.799608967276	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGTCCTTGCAGAAG	NA	False	NA	-1	True	AATAAA	-19	NA	34089112	34044665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052984_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
m54284U_201201_044215/49087776/ccs	chr13	-	2692	13	NIC	ENSMUSG00000034617.8	novel	2728	14	NA	NA	0	82	combination_of_known_junctions	FALSE	canonical	3	56	junction_11	116.868753546684	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730268	68709399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68725706_68725825_68728669_68728835_68730183
m54284U_201201_044215/49088576/ccs	chr5	-	1705	4	NIC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	5649	junction_3	1280.51873169518	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	6764	False	NA	NA	False	AGTAAA	-18	NA	148989850	148985037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_148985724_148986536_148987251_148987397_148987562_148989709
m54284U_201201_044215/49154770/ccs	chr4	+	3038	4	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	1507	117	intron_retention	FALSE	canonical	3	1882	junction_2	93.0268778364619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGACCCCCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	156323182	156327231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156323760_156323846_156325959_156326117_156326258_156327022
m54284U_201201_044215/4916654/ccs	chr17	+	3683	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	168.319388861375	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8820	False	NA	32	True	AATAAA	-33	NA	35354485	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201201_044215/49219264/ccs	chr18	+	2079	11	NIC	ENSMUSG00000024563.17	novel	1305	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.1644197742522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTAACTTGGAAGTCC	NA	False	NA	9	True	AATAAA	-22	NA	76375244	76438365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
m54284U_201201_044215/49219404/ccs	chr2	-	217	1	Intergenic	novelGene_743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTACAAGATCTAGAAAA	NA	False	NA	NA	False	NA	NA	NA	34155869	34155652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34155700_34155900
m54284U_201201_044215/49219885/ccs	chr19	+	2528	10	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_2	88.367917758024	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043484	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38043530_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/49284391/ccs	chr10	-	6068	15	NIC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_14	29.291288668079	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGATTGTCTTGTGATGT	NA	False	NA	1	True	ATTAAA	-23	NA	100323212	100279763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100320912_100320988_100323023
m54284U_201201_044215/49285361/ccs	chr16	+	5797	16	NNC	ENSMUSG00000035107.14	novel	6561	16	NA	NA	68	-619	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_9	27.1535551181711	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTCCAGAAAATGCCAAAT	NA	False	NA	11	True	AATAAA	-16	NA	58228873	58289471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275565_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
m54284U_201201_044215/49348774/ccs	chr4	+	1576	8	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	58	-124	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	2724.04399257233	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCTTTTCTTTCTTTT	6	True	NA	29	True	AATAAA	-25	NA	46450959	46472533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_46451350_46456385_46456428_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
m54284U_201201_044215/49479951/ccs	chr2	-	2822	7	NIC	ENSMUSG00000026932.15	novel	6378	6	NA	NA	0	2054	intron_retention	FALSE	canonical	2	11	junction_5	12.0611866009204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	8899	False	NA	NA	False	NA	NA	NA	26012830	25949021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980173_25980253_25980495_26012700
m54284U_201201_044215/49547444/ccs	chr2	-	3120	11	NIC	ENSMUSG00000037376.15	novel	2948	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_10	143.75746937116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAATGATACAATGCT	NA	False	NA	-12	True	AATAAA	-23	NA	132657974	132646126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652006_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657550
m54284U_201201_044215/49547564/ccs	chr19	-	1718	7	NIC	ENSMUSG00000071662.5	novel	890	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1319	junction_5	85.9626857033523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTGGTTTTATGT	NA	False	NA	-1	True	ATTAAA	-17	NA	8775941	8770490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8775698_8775822
m54284U_201201_044215/49547697/ccs	chrX	+	2029	9	NIC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_6	75.5379664473435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326355	73333757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332321_73332710_73332789_73332904
m54284U_201201_044215/49547816/ccs	chr10	-	219	1	Intergenic	novelGene_5248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	576	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCTAGTATCAGAGACAA	NA	False	NA	NA	False	NA	NA	NA	33236559	33236340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_33236300_33236600
m54284U_201201_044215/49611081/ccs	chr7	+	2941	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	330.904914263504	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654169_3654302_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201201_044215/49611610/ccs	chr19	-	191	1	Intergenic	novelGene_9302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAACAGACAAACAAACAA	744	False	NA	NA	False	NA	NA	NA	45839269	45839078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45839100_45839300
m54284U_201201_044215/49611819/ccs	chr6	+	2637	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	277.678279068901	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_125108967_125109130_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
m54284U_201201_044215/49676907/ccs	chr5	-	2980	15	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	307.580120638907	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719036	38684155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718854
m54284U_201201_044215/49678016/ccs	chr1	-	2632	1	Genic_Genomic	ENSMUSG00000073643.12	novel	NA	NA	NA	NA	18727	964	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCAGAGAAAGCACCATA	NA	False	NA	NA	False	NA	NA	NA	79681646	79679014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_-_79679000_79681600
m54284U_201201_044215/49678678/ccs	chr8	+	3651	12	NNC	ENSMUSG00000036054.16	novel	4609	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	31.9027447716798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	1483	False	NA	26	True	AATAAA	-17	NA	70687266	70715755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711729_70712332_70712470_70713118_70713240_70713880_70713968_70715520
m54284U_201201_044215/49741909/ccs	chr7	-	3290	5	NIC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	218	0	intron_retention	FALSE	canonical	0	0	junction_1	292.257164155132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126625978	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126625327_126625399
m54284U_201201_044215/49742379/ccs	chr5	-	3893	32	NIC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	0	-3622	combination_of_known_junctions	FALSE	canonical	2	76	junction_16	43.795262003845	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGCTTCTGCATCCTAC	9610	False	NA	-1	True	TATAAA	-28	NA	135518112	135439010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
m54284U_201201_044215/49742475/ccs	chrX	-	6952	1	Intergenic	novelGene_9521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACTAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-35	NA	87646476	87639524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_87639500_87646500
m54284U_201201_044215/4980873/ccs	chr2	-	2080	17	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_12	654.785291025806	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022132	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
m54284U_201201_044215/49809685/ccs	chr14	-	1375	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1401.10168023857	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
m54284U_201201_044215/4980985/ccs	chr5	+	1082	11	NNC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	0	-9943	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_10	165.154503420282	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATCTACAGAAATGAGTG	NA	False	NA	NA	False	ATTAAA	-23	NA	149601694	149664657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149664505
m54284U_201201_044215/4981728/ccs	chr18	-	1460	2	NNC	ENSMUSG00000038059.8	novel	1990	2	NA	NA	11807	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTTGTTTGTTTGTT	7262	False	NA	2	True	GATAAA	-15	NA	60622841	60607262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_60608658_60622776
m54284U_201201_044215/4983133/ccs	chr9	+	4140	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	72	junction_21	38.6895897334347	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5736	False	NA	19	True	AATAAA	-19	NA	21249123	21266324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296
m54284U_201201_044215/4983207/ccs	chr10	-	1446	5	NIC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	0	-118	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	175.888281303787	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTAAAATTGGATTTCGG	NA	False	NA	NA	False	NA	NA	NA	95252719	95223646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95252479
m54284U_201201_044215/49938628/ccs	chr7	-	189	1	Antisense	novelGene_ENSMUSG00000036892.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACAACCTCAGTTGATT	5043	False	NA	NA	False	NA	NA	NA	30211886	30211697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_30211700_30211900
m54284U_201201_044215/50004010/ccs	chr6	+	3667	5	NIC	ENSMUSG00000015053.15	novel	3571	6	NA	NA	335	0	intron_retention	FALSE	canonical	3	138	junction_3	10.280442597476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCCTGTTGAGTGG	NA	False	NA	14	True	AATAAA	-15	NA	88175650	88184014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_88175864_88176498_88177843_88179400_88179547_88181564_88181691_88182176
m54284U_201201_044215/50006362/ccs	chr17	-	186	1	Intergenic	novelGene_8377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACACGCTCTCCCTGAA	NA	False	NA	NA	False	NA	NA	NA	15753647	15753461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_15753500_15753600
m54284U_201201_044215/50071655/ccs	chr17	-	4753	11	ISM	ENSMUSG00000052105.18	ENSMUST00000097291.10	7274	15	0	10980	0	0	5prime_fragment	FALSE	canonical	3	123	junction_9	30.9258791305922	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAAATTGTAGTACAGT	NA	False	NA	-5	True	AATAAA	-19	NA	66756745	66654960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
m54284U_201201_044215/50072073/ccs	chr17	+	905	6	NNC	ENSMUSG00000000579.15	novel	2589	5	NA	NA	0	347	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	4194.75856754593	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTTTTTGTGTTCCTTG	NA	False	NA	NA	False	AATAAA	-12	NA	6869190	6875295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_6869236_6870885_6870928_6873123_6873344_6874010_6874135_6874472_6874551_6874899
m54284U_201201_044215/50072251/ccs	chrX	-	1372	5	NIC	ENSMUSG00000015668.14	novel	1497	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	301	junction_4	119.69962405956	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTGCTTGAATATAAAAT	NA	False	NA	-4	True	AATAAA	-17	NA	99669544	99666488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
m54284U_201201_044215/50136476/ccs	chr10	+	1717	12	ISM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	1889	0	1322	0	3prime_fragment	FALSE	canonical	3	51	junction_1	7.05117070169648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	False	NA	10	True	ATTAAA	-16	NA	127161513	127165812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
m54284U_201201_044215/50136885/ccs	chr17	-	2888	10	NIC	ENSMUSG00000010592.10	novel	2976	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_3	120.807570689102	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCACTGACTTACTGTCC	NA	False	NA	-5	True	AATAAA	-16	NA	50600627	50586424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_50588340_50590155_50590255_50591265_50591380_50593278_50593351_50594555_50594696_50594782_50594847_50595138_50595191_50595641_50595734_50596119_50596267_50600434
m54284U_201201_044215/50137081/ccs	chr17	+	4455	14	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1624	junction_8	133.198432743059	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88026964_88028310_88028487_88030758
m54284U_201201_044215/50200698/ccs	chr2	+	1072	10	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	0	-393	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_7	212.256890711046	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587933	164610134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164607080_164607153_164609626_164609683_164609782
m54284U_201201_044215/50201284/ccs	chr11	-	553	4	NIC	ENSMUSG00000025144.18	novel	692	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	126	junction_3	359.512942125253	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604564	120601768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120602133_120602215_120602305_120602528_120602583_120604518
m54284U_201201_044215/50201918/ccs	chr6	-	724	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	0	-205	0	205	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTCAGAATCACACCCA	NA	False	NA	-1	True	AATAAA	-24	NA	99855295	99854571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_99854600_99855300
m54284U_201201_044215/50201977/ccs	chr5	+	4353	28	NIC	ENSMUSG00000029516.20	novel	4398	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	6.95488104645726	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	NA	False	NA	NA	False	AATAAA	-16	NA	116083355	116136557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_116083531_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
m54284U_201201_044215/50266186/ccs	chr11	+	1708	11	NNC	ENSMUSG00000035198.10	novel	1802	11	NA	NA	203	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	211.726450874708	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCCCCGGTCTCTGAA	1433	False	NA	16	True	AATAAA	-19	NA	101010966	101017245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_101011069_101011372_101011486_101011656_101011825_101013389_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
m54284U_201201_044215/50268551/ccs	chr7	+	3774	13	NNC	ENSMUSG00000040268.18	novel	2301	13	NA	NA	0	183	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_11	78.0035611722667	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTGAATTCTTGGGGT	NA	False	NA	13	True	AATAAA	-21	NA	130467616	130515225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511282_130511359_130512561
m54284U_201201_044215/50331929/ccs	chr8	+	4783	29	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_14	87.3799176012429	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614749_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
m54284U_201201_044215/50332204/ccs	chr9	+	1791	9	NIC	ENSMUSG00000032495.9	novel	666	5	NA	NA	0	-1824	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	99.4054198723591	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATATTTCAGTATACT	NA	False	NA	NA	False	NA	NA	NA	110782866	110811310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_110782957_110786867_110787015_110789869_110790078_110791582_110791740_110795508_110795646_110799081_110799228_110808537_110808694_110809894_110810032_110810697
m54284U_201201_044215/50332632/ccs	chr11	-	5441	20	Fusion	ENSMUSG00002076856.1_ENSMUSG00000018363.17	novel	2358	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_16	13.0135237562321	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACTGAGTTTTTACT	NA	False	NA	-6	True	AATAAA	-39	NA	106811541	106710891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106759822_106759935_106762327_106762437_106766726_106766766_106811006
m54284U_201201_044215/50333319/ccs	chr12	+	2373	11	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	183.218039504848	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109613186_109615587_109615677_109616505_109616590_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623275_109624486_109624556_109626156_109626242_109627179
m54284U_201201_044215/50333901/ccs	chr7	-	2990	10	NIC	ENSMUSG00000030733.11	novel	3366	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_2	41.0918873973506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGCTGTGGCTGATATT	8177	False	NA	-3	True	AATAAA	-26	NA	126074302	126066167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
m54284U_201201_044215/50397267/ccs	chr7	-	1624	12	NNC	ENSMUSG00000030491.17	novel	1620	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	137.361139499598	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAGGCTACATTGCAGA	NA	False	NA	-42	True	AATAAA	-4	NA	35237118	35193065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_35193363_35193610_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537_35228697_35236938
m54284U_201201_044215/50397387/ccs	chr17	-	2981	8	NNC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	339	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_7	209.534664220993	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46341943	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
m54284U_201201_044215/50463310/ccs	chr17	+	3268	7	NIC	ENSMUSG00000025737.6	novel	3139	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	100	junction_2	13.3499895963339	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTGTCACTTTCATTG	NA	False	NA	18	True	AATAAA	-20	NA	26042622	26047704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046507_26046626_26046968_26047127_26047313_26047388
m54284U_201201_044215/50463500/ccs	chr5	+	1544	11	NIC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1466	0	intron_retention	FALSE	canonical	3	1482	junction_9	145.331483168651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991746	22008785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008461_22008544
m54284U_201201_044215/5048498/ccs	chr4	-	211	1	Intergenic	novelGene_2161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAATAGCTTCTTCCTGT	4582	False	NA	NA	False	NA	NA	NA	129680158	129679947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129679900_129680200
m54284U_201201_044215/50594008/ccs	chr5	+	2881	12	NIC	ENSMUSG00000029283.18	novel	2961	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	76.50290331011	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112246	107132298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127181_107127311_107130829
m54284U_201201_044215/50594022/ccs	chr11	+	2559	10	NIC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_3	427.085471539363	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207038	101214363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101207315_101208006_101208040_101208154_101208218_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
m54284U_201201_044215/50595976/ccs	chr15	+	2578	11	NIC	ENSMUSG00000022456.19	novel	4992	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	9.47048045243746	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGTCTTTGTCTTAT	NA	False	NA	NA	False	ACTAAA	-21	NA	82159439	82178775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
m54284U_201201_044215/50596482/ccs	chr8	+	871	4	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	2963	junction_1	305.690838738895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71126108_71129204_71129247_71130427_71130785_71131009
m54284U_201201_044215/50659561/ccs	chr7	+	831	5	NIC	ENSMUSG00000078681.11	novel	905	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	208.078711068672	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAACTTTTTATTTGCC	NA	False	NA	26	True	AATAAA	-26	NA	65343214	65351659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_65343318_65344917_65345076_65347443_65347619_65348839_65348916_65351340
m54284U_201201_044215/50660269/ccs	chr7	-	1797	10	NIC	ENSMUSG00000025494.9	novel	1990	10	NA	NA	-127	0	combination_of_known_splicesites	TRUE	canonical	3	90	junction_9	19.9616917069288	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676779	140671087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140676532
m54284U_201201_044215/50660548/ccs	chr1	+	1920	5	NNC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	24529	0	intron_retention	FALSE	canonical	3	12	junction_1	75.0083328704218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165982564	165994079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_165982709_165985081_165985238_165991341_165991462_165992148_165992285_165992715
m54284U_201201_044215/50660802/ccs	chr13	-	3586	14	NIC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	1612	junction_10	160.614205713327	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498358	74470372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
m54284U_201201_044215/50661084/ccs	chr2	-	1307	10	NIC	ENSMUSG00000040174.15	novel	1228	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	49.5186708770752	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATGATTTGATCCAAAA	8853	False	NA	-7	True	ATTAAA	-20	NA	93841097	93810981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_93811323_93811860_93811960_93826527_93826738_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93840607_93840754_93841027
m54284U_201201_044215/50661568/ccs	chr17	-	171	1	Intergenic	novelGene_8510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAAATCTTTAATAATA	9527	False	NA	NA	False	NA	NA	NA	31668992	31668821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_31668800_31669000
m54284U_201201_044215/50662164/ccs	chr11	-	5218	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	633	junction_4	229.626625065073	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915015	98883768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
m54284U_201201_044215/50662219/ccs	chr10	+	1739	9	NIC	ENSMUSG00000020211.16	novel	727	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	436.564070326453	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	5123	False	NA	29	True	ATTAAA	-17	NA	80634802	80640758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80634937_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
m54284U_201201_044215/50727080/ccs	chrX	+	5598	30	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	0	-414	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	47.6051186808053	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTTTGAGTTTTAA	NA	False	NA	10	True	ATTAAA	-23	NA	18028875	18145761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
m54284U_201201_044215/50790843/ccs	chr11	+	1081	5	NNC	ENSMUSG00000018411.18	novel	831	2	NA	NA	-8167	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	186.526640188473	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGAAAAAAAAACATGTA	9689	False	NA	5	True	AATAAA	-9	NA	104200691	104219261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_104200848_104201094_104201361_104212176_104212259_104213253_104213367_104218797
m54284U_201201_044215/50790948/ccs	chr11	+	3143	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	30191	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_18	111.613056942955	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCATAATTTGTTC	2027	False	NA	8	True	NA	NA	NA	87018013	87141700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
m54284U_201201_044215/50856492/ccs	chr19	-	203	1	Intergenic	novelGene_9340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGAAGCCGGGCGTG	2269	False	NA	NA	False	NA	NA	NA	53586778	53586575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_53586600_53586800
m54284U_201201_044215/50856951/ccs	chr15	-	6295	40	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_23	86.9802474421745	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199514	89172485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187346_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
m54284U_201201_044215/50857201/ccs	chr5	-	1210	5	NIC	ENSMUSG00000029433.17	novel	1576	6	NA	NA	0	-199	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	267.106135272105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGAGTCTTCAGGCTGTC	8962	False	NA	-9	True	ATTAAA	-20	NA	123662199	123649966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123662133
m54284U_201201_044215/50922392/ccs	chr12	-	295	2	NIC	ENSMUSG00000112819.2	novel	457	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAACTGTCTTGGCTACA	NA	False	NA	NA	False	NA	NA	NA	4603785	4602545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_4602746_4603690
m54284U_201201_044215/50923187/ccs	chr7	+	2794	16	NIC	ENSMUSG00000006599.14	novel	2736	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	187.878920821067	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCTCTTGGAGTCTT	4717	False	NA	4	True	AATAAA	-15	NA	46445537	46473224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_46445713_46446820_46446890_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
m54284U_201201_044215/50923239/ccs	chr11	-	2202	16	NIC	ENSMUSG00000018848.5	novel	2109	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	319.864443510407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGTGTGTTTCTTTGT	NA	False	NA	-1	True	AGTAAA	-17	NA	35725333	35699207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723397_35723491_35723998_35724134_35725263
m54284U_201201_044215/50923698/ccs	chr4	+	2838	15	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	82.4728774216353	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-25	True	NA	19	True	AGTAAA	-16	NA	11558921	11615805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
m54284U_201201_044215/50924291/ccs	chr19	+	187	1	Intergenic	novelGene_9295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTCTGCTTGTTTACTT	NA	False	NA	NA	False	NA	NA	NA	45384786	45384973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45384800_45385000
m54284U_201201_044215/50987342/ccs	chr11	-	177	1	Intergenic	novelGene_5774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATGTGTTGTGTGTGT	3463	False	NA	NA	False	NA	NA	NA	33989689	33989512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_33989500_33989700
m54284U_201201_044215/50987382/ccs	chr11	-	154	1	Intergenic	novelGene_5776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	36615763	36615609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_36615600_36615800
m54284U_201201_044215/50987768/ccschrUn	chrUn_JH584304v1	-	2206	8	Intergenic	novelGene_9758	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_4	262.594589371805	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59716	52189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55249_55464_55702_56985_57152_58563_58836_59591
m54284U_201201_044215/50987970/ccs	chr3	+	5439	11	NIC	ENSMUSG00000025764.15	novel	5481	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_4	226.907668446882	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTGTTGAAAT	NA	False	NA	13	True	AATAAA	-22	NA	41510165	41571293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548237_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
m54284U_201201_044215/50989509/ccs	chr3	-	3499	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	298.123339202467	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201201_044215/51054521/ccs	chr4	-	2495	13	NIC	ENSMUSG00000028896.14	novel	2326	11	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_10	276.521347377658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTTGTTTTTATGCGT	NA	False	NA	-14	True	AATAAA	-17	NA	132080944	132059233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132079432_132079555_132079973_132080010_132080907
m54284U_201201_044215/51119340/ccs	chr11	+	2052	7	NNC	ENSMUSG00000020794.14	novel	3931	7	NA	NA	0	-1869	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	361.934347944793	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAAGTTGTTGGCTTTT	NA	False	NA	NA	False	AATATA	-16	NA	72498108	72575438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_72498462_72553896_72554000_72560859_72560966_72563785_72563884_72568530_72568710_72570194_72570319_72574349
m54284U_201201_044215/51120111/ccs	chr4	+	3172	4	Intergenic	novelGene_2345	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	34.5864456430872	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146370024	146393561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_146370163_146384326_146384431_146388486_146388614_146390758
m54284U_201201_044215/5112256/ccs	chr3	+	549	4	NIC	ENSMUSG00000039221.11	novel	552	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	450	junction_2	3086.0505864652	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATGGTTCATCAGTGT	NA	False	NA	17	True	AATAAA	-22	NA	28859658	28861571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_28859693_28860651_28860742_28860818_28861008_28861335
m54284U_201201_044215/5113370/ccs	chr12	+	1599	11	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	18.3586491877807	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGGGTCTCCAAAGAGTAA	8713	False	NA	7	True	AATAAA	-40	NA	79344124	79861152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_79344197_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860683
m54284U_201201_044215/5114280/ccs	chr2	+	1129	8	NNC	ENSMUSG00000001999.16	novel	1160	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	61.7962418776747	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAATAGTGTTGATGACT	2237	False	NA	NA	False	AATAAA	-20	NA	126912612	126939004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_126912646_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
m54284U_201201_044215/51186254/ccs	chr10	-	2059	7	NIC	ENSMUSG00000019942.14	novel	1253	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2056	junction_1	110.037367390456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTCTGTATATGTGCA	NA	False	NA	-28	True	TTTAAA	-1	NA	69188740	69174153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69182062_69185925_69185989_69188665
m54284U_201201_044215/51249376/ccs	chr17	-	2272	5	NIC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	416	junction_3	46.8268085609088	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063121	47046681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_47047835_47048100_47048776_47054111_47054209_47058346_47058471_47062898
m54284U_201201_044215/51251326/ccs	chr3	+	2826	12	NIC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	370	junction_2	63.7556025734534	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072123	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89072414_89074341_89074512_89076001_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
m54284U_201201_044215/51316195/ccs	chr7	+	196	1	Intergenic	novelGene_3635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGCAAAAACCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	4976795	4976991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_4976800_4977000
m54284U_201201_044215/51316973/ccs	chr1	-	5749	24	NNC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-166	-729	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	37.0299015740794	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	252	False	NA	-2	True	AATAAA	-23	NA	161704417	161644411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_161646379_161647963_161648017_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
m54284U_201201_044215/51317389/ccs	chr4	+	2710	22	NIC	ENSMUSG00000028700.15	novel	2719	22	NA	NA	0	0	intron_retention	TRUE	canonical	2	5	junction_1	91.9681498648807	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGTGTATTTTGTAATA	NA	False	NA	6	True	ATTAAA	-16	NA	116007714	116017041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_116007815_116008270_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
m54284U_201201_044215/51380496/ccs	chr17	+	3921	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_18	174.725137287112	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363961_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201201_044215/51380970/ccs	chr2	+	1975	6	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	38.5725290848293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	1945	False	NA	NA	False	AATAAA	-15	NA	122016752	122036878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_122016834_122016944_122017027_122021087_122021150_122023712_122023787_122028866_122028956_122035291
m54284U_201201_044215/51381034/ccs	chr7	-	1397	12	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	47.3902385596844	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	140367765	140357141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140359795_140359844_140360369_140360445_140360787_140360848_140367648
m54284U_201201_044215/51381447/ccs	chr8	-	3061	5	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	154.279575770742	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGAGTTGCTTCCTT	NA	False	NA	NA	False	AATAAA	-23	NA	87611886	87570946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_87571670_87573442_87573551_87575074_87575183_87587053_87588739_87611449
m54284U_201201_044215/51446709/ccs	chr11	+	2922	10	NNC	ENSMUSG00000059248.14	novel	778	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	196.831569283656	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTCTGGAGTTCTCT	NA	False	NA	91	True	AATAAA	-16	NA	117217258	117253139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_117217386_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
m54284U_201201_044215/51447463/ccs	chr15	+	1825	11	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	440.245715481707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	195	False	NA	28	True	AATAAA	-14	NA	38662187	38692687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_38662328_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
m54284U_201201_044215/51448095/ccs	chr1	-	5342	21	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	13.6318560731839	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTCTCATGTTGACT	NA	False	NA	-3	True	ATTAAA	-25	NA	24139297	24050761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
m54284U_201201_044215/51511966/ccs	chr11	-	2115	10	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_9	1410.46163531354	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
m54284U_201201_044215/51513080/ccs	chr10	-	178	1	Intergenic	novelGene_5558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTAAAAAAAATAGAATT	NA	False	NA	NA	False	NA	NA	NA	117599606	117599428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_117599400_117599600
m54284U_201201_044215/51578233/ccs	chr17	-	3948	21	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	0	133	intron_retention	FALSE	canonical	3	13	junction_3	29.5202896327255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525905	56493673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56494462_56495267_56495380_56496322_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
m54284U_201201_044215/51579644/ccs	chr17	+	4725	16	NIC	ENSMUSG00000024068.9	novel	4672	17	NA	NA	-123	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	64.0070829413954	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATAGTCTTCGATATT	9718	False	NA	33	True	AATAAA	-24	NA	74645858	74698110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_74646441_74658944_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
m54284U_201201_044215/51643304/ccs	chr11	+	3759	5	NIC	ENSMUSG00000051043.17	novel	3667	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	13.4164078649987	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTGTGTTTCTAAGTGA	936	False	NA	NA	False	ATTAAA	-38	NA	114742675	114763443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_114742813_114754292_114755373_114757450_114757546_114759321_114759472_114761146
m54284U_201201_044215/51644876/ccs	chr7	+	5236	15	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_8	103.929528714295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	92	False	NA	20	True	ATTAAA	-20	NA	4140047	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
m54284U_201201_044215/51645166/ccs	chr15	+	4448	20	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	0	-234	combination_of_known_splicesites	FALSE	canonical	1	10	junction_7	219.72141767484	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	40	False	NA	18	True	AATAAA	-18	NA	12117916	12185535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
m54284U_201201_044215/51708917/ccs	chr17	-	1973	11	NIC	ENSMUSG00000024037.14	novel	1897	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	142.866686109814	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGAATGTTCAGCAG	NA	False	NA	-17	True	AATAAA	-17	NA	31731283	31715095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722702_31728742_31728887_31729551_31729621_31731140
m54284U_201201_044215/51709034/ccs	chr10	+	196	1	Intergenic	novelGene_5520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAAATGAAGCACTGGAA	NA	False	NA	NA	False	NA	NA	NA	96137307	96137503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_96137300_96137500
m54284U_201201_044215/51710103/ccs	chr18	+	1118	3	NNC	ENSMUSG00000024513.17	novel	1290	3	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	140	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGGAAGTGCCTGGTGT	NA	False	NA	13	True	AATAAA	-30	NA	70701513	70715983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_70702039_70713723_70713884_70715550
m54284U_201201_044215/51710477/ccs	chr11	-	4056	16	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_2	152.373430171478	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_119996860_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201201_044215/51773594/ccs	chr8	+	2923	5	ISM	ENSMUSG00000031982.6	ENSMUST00000212036.2	891	6	0	-167	0	0	intron_retention	FALSE	canonical	3	24	junction_2	38.9767558937375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGGTTGTCTTTTGAA	NA	False	NA	21	True	AATAAA	-30	NA	125448897	125460862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_125449082_125451994_125452115_125455107_125455222_125457577_125457756_125458535
m54284U_201201_044215/51774200/ccs	chr2	-	5670	8	NNC	ENSMUSG00000074994.7	novel	9037	12	NA	NA	-234	-15186	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	22.6337295708355	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTTTTATTTTGTTG	NA	False	NA	-6	True	AATAAA	-17	NA	104647339	104600325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_104601021_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
m54284U_201201_044215/51774858/ccs	chr16	-	1319	11	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	148.536325523422	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831391	4826593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828761_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
m54284U_201201_044215/51776145/ccs	chr17	+	3460	5	NIC	ENSMUSG00000071172.14	novel	2594	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1420	junction_1	282.90225785596	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGCCTGTTTTTCCTTG	NA	False	NA	37	True	ATTAAA	-28	NA	29251646	29261084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29251761_29255214_29255423_29257463_29259788_29260180_29260268_29260357
m54284U_201201_044215/51776332/ccs	chr17	+	2755	17	NIC	ENSMUSG00000041354.17	novel	943	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	27.6331294599435	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	4560	False	NA	12	True	AATAAA	-18	NA	34149881	34156661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34150045_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
m54284U_201201_044215/5178664/ccs	chr13	+	1443	5	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	115.720298565118	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTGTAGTCAGTTGCAA	9637	False	NA	14	True	AATAAA	-29	NA	112937325	113004428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_112937801_112993279_112993561_112996177_112996236_113003329_113003507_113003976
m54284U_201201_044215/51839114/ccs	chr11	-	5630	25	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_24	44.6783061638047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148401	86101506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148330
m54284U_201201_044215/51840051/ccs	chr5	-	3578	15	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_11	29.1194759147726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGAATTTCTTGTGG	NA	False	NA	0	True	AATAAA	-27	NA	44383968	44332500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44356654_44356721_44361551_44361671_44375445_44375577_44383755
m54284U_201201_044215/51840180/ccs	chrX	-	1777	10	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1072	junction_8	153.432898431163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
m54284U_201201_044215/51840203/ccs	chr16	-	5694	14	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	26	junction_9	134.947590089656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406410	30380188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
m54284U_201201_044215/51905020/ccs	chr17	-	4167	32	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_16	55.8979298721861	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035586	80887945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
m54284U_201201_044215/51905312/ccs	chr19	-	4641	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	122.221904361768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	4078	False	NA	-1	True	AATAAA	-20	NA	7319007	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
m54284U_201201_044215/51905365/ccs	chr16	-	193	1	Intergenic	novelGene_8075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTCTTATCTCAG	NA	False	NA	-1	True	NA	NA	NA	13581400	13581207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_13581200_13581400
m54284U_201201_044215/51905417/ccs	chr19	-	158	1	Intergenic	novelGene_9197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTTTGACTATGCTCT	NA	False	NA	NA	False	NA	NA	NA	28165545	28165387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_28165400_28165500
m54284U_201201_044215/51907100/ccs	chr4	-	4094	12	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	71.6409781624045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134580656	134530069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134564077_134564346_134565159_134565302_134580348
m54284U_201201_044215/51970830/ccs	chr1	-	5722	1	Genic_Genomic	ENSMUSG00000054387.14	novel	NA	NA	NA	NA	12564	3084	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGGTGGTGTTATCATT	NA	False	NA	2	True	NA	NA	NA	132916595	132910873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_-_132910900_132916600
m54284U_201201_044215/51972070/ccs	chr5	-	5957	12	NIC	ENSMUSG00000028995.15	novel	5659	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.3033446430527	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCTTCTAGATCATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	24235688	24165928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24170357_24171131_24171430_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
m54284U_201201_044215/52036079/ccs	chr10	+	107	1	Intergenic	novelGene_5260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGTTGGGGATTTAGCT	NA	False	NA	NA	False	NA	NA	NA	38847755	38847862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_38847800_38847900
m54284U_201201_044215/52036290/ccs	chr8	+	2286	14	NIC	ENSMUSG00000010154.8	novel	2330	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	20.1212302140163	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACATTGTCTCTTTCCC	NA	False	NA	18	True	NA	NA	NA	124059451	124096254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_124059760_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124093574_124093603_124095416_124095533_124095910
m54284U_201201_044215/52037797/ccs	chr5	-	1814	9	NIC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	0	-440	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	291.131172111473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACGGTATTGCCTCTCTA	NA	False	NA	-5	True	AATAAA	-17	NA	124717138	124708715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124716766
m54284U_201201_044215/52038374/ccs	chrX	+	177	1	Intergenic	novelGene_9476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGTGAGAAAAAATGGC	NA	False	NA	NA	False	NA	NA	NA	57024976	57025153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_57025000_57025200
m54284U_201201_044215/52103051/ccs	chr2	+	2370	17	NIC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	585.730790204638	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157120978	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_157121133_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
m54284U_201201_044215/52103803/ccs	chr2	-	2988	15	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	155.373562350713	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652910	93525975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650374_93650495_93652731
m54284U_201201_044215/52168221/ccs	chr11	-	3599	17	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	93	junction_13	83.8961178705546	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3539	False	NA	-2	True	AATAAA	-15	NA	115494719	115475080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482521_115483257_115483357_115485531_115485608_115485734_115485820_115494653
m54284U_201201_044215/52168247/ccs	chr16	+	977	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17038	0	at_least_one_novel_splicesite	FALSE	canonical	3	485	junction_1	244.404064898224	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	733	False	NA	11	True	AATAAA	-16	NA	48432067	48451263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_48432222_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
m54284U_201201_044215/52169012/ccs	chr11	+	4998	33	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_21	22.8920701335637	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGATCCTACTATTGT	1466	False	NA	NA	False	AATAAA	-24	NA	70453706	70505309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
m54284U_201201_044215/52169106/ccs	chr7	+	3660	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	117.390224651587	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	92	False	NA	20	True	ATTAAA	-20	NA	4140047	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
m54284U_201201_044215/52232290/ccs	chr12	+	3604	11	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	695.298525814632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504649	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
m54284U_201201_044215/52232499/ccs	chr6	+	4225	24	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_20	89.841343037126	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891355	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
m54284U_201201_044215/52297799/ccs	chr13	+	178	1	Intergenic	novelGene_7235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAAAATCCAGTC	NA	False	NA	NA	False	NA	NA	NA	92741926	92742104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_92741900_92742100
m54284U_201201_044215/52297928/ccs	chr9	+	1017	8	NIC	ENSMUSG00000025785.6	novel	1053	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	451.937642438712	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGTTAGCATCTCC	NA	False	NA	15	True	AATAAA	-20	NA	122942311	122965194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_122942388_122947959_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
m54284U_201201_044215/52299034/ccs	chr11	-	2920	7	NIC	ENSMUSG00000018678.14	novel	3055	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	301	junction_6	68.1854089963535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCGTTGTAACTGCTTG	NA	False	NA	-11	True	ATTAAA	-16	NA	96868537	96844298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854268_96868446
m54284U_201201_044215/52364545/ccs	chr6	+	1692	11	NIC	ENSMUSG00000042389.14	novel	2106	12	NA	NA	0	-294	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	74.5318723768563	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTTTTTGAGAGAATAAA	NA	False	NA	12	True	AATAAA	-12	NA	115521662	115555295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_115521690_115524782_115524992_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
m54284U_201201_044215/52365241/ccs	chr17	-	2486	16	NNC	ENSMUSG00000004865.17	novel	4653	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	187.794024280741	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTCTATGCTCAC	NA	False	NA	-2	True	ATTAAA	-39	NA	28841461	28808563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818841_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
m54284U_201201_044215/524392/ccs	chr4	+	217	1	Intergenic	novelGene_2098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTTTTATGTTTGAAAA	NA	False	NA	NA	False	AAAAAG	-24	NA	124563524	124563741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_124563500_124563700
m54284U_201201_044215/5244805/ccs	chr7	-	2957	20	NIC	ENSMUSG00000030738.12	novel	3383	21	NA	NA	0	-456	intron_retention	FALSE	canonical	3	1924	junction_13	253.902570360083	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTTGCTTGTTGTCTGC	NA	False	NA	-8	True	ATTAAA	-18	NA	126165530	126146082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126146253_126146356_126146520_126146606_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
m54284U_201201_044215/52560538/ccs	chr15	-	1793	12	NNC	ENSMUSG00000067713.8	novel	1652	12	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_11	103.380465568487	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTTGATTTCTGC	9503	False	NA	-4	True	ATTAAA	-22	NA	98729248	98710677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729015
m54284U_201201_044215/525932/ccs	chr17	-	3412	15	NNC	ENSMUSG00000024006.18	novel	3354	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_13	272.958619873536	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226939	29189853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29219797_29219886_29226684
m54284U_201201_044215/52625701/ccs	chr19	+	3716	1	FSM	ENSMUSG00000099118.3	ENSMUST00000183735.3	87	1	2	-3631	2	3631	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGTTCAGAACTGGGTT	NA	False	NA	NA	False	NA	NA	NA	40883148	40886864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_40883100_40886900
m54284U_201201_044215/52627129/ccs	chr7	-	1695	13	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	235.631362277794	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5440	False	NA	-10	True	AATAAA	-13	NA	44519212	44512492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514091_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
m54284U_201201_044215/52628052/ccs	chr18	-	3945	6	NIC	ENSMUSG00000052102.16	novel	2289	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1055	junction_1	137.672945780934	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTGTCTTTTGT	NA	False	NA	-30	True	ATTAAA	-13	NA	38472033	38460610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38468171_38471143_38471276_38471960
m54284U_201201_044215/52693741/ccs	chr17	+	2673	3	NIC	ENSMUSG00000053390.17	novel	3118	5	NA	NA	0	-208	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGGAATTTGTGC	NA	False	NA	12	True	AATAAA	-19	NA	33212112	33224223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_33212233_33220931_33220993_33221731
m54284U_201201_044215/527128/ccs	chr9	+	3587	23	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_22	56.4293605073877	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5736	False	NA	19	True	AATAAA	-19	NA	21249123	21266324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264425_21264977
m54284U_201201_044215/52756620/ccs	chr2	+	190	1	Intergenic	novelGene_833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAAGAAAAAAGAAAGGT	NA	False	NA	NA	False	NA	NA	NA	69668794	69668984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69668800_69669000
m54284U_201201_044215/52759323/ccs	chr3	+	3702	25	NNC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	-203	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	124.832380670597	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTAGGCCTGTGTGCACG	NA	False	NA	7	True	AATAAA	-18	NA	63148890	63288841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_63148988_63150636_63150716_63197272_63197448_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
m54284U_201201_044215/52824262/ccs	chr6	+	4316	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_24	15.4811152878452	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369653	140542836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140541974
m54284U_201201_044215/52824399/ccs	chr2	-	4369	3	NNC	ENSMUSG00000040321.4	novel	4300	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAGATTTTGTTTGGTGA	NA	False	NA	-4	True	AATAAA	-25	NA	114031921	114023941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_114028109_114031435_114031534_114031817
m54284U_201201_044215/52824499/ccs	chr9	+	4099	16	NNC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	33.650887391304	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTTGTTCTTTAGA	4669	False	NA	69	True	AATACA	-21	NA	69305204	69340404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_69305283_69306227_69306370_69307758_69307864_69314398_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
m54284U_201201_044215/52887802/ccs	chr11	+	172	1	Intergenic	novelGene_6387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAACTGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106350878	106351050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106350900_106351000
m54284U_201201_044215/52889516/ccs	chrX	-	877	8	NIC	ENSMUSG00000054727.3	novel	1224	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	152	junction_7	416.319245634542	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGACTTTAGTATATTT	NA	False	NA	-11	True	AGTAAA	-17	NA	52759798	52744867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_52745154_52745318_52745424_52747619_52747719_52748908_52749009_52749789_52749908_52751980_52752016_52752989_52753054_52759728
m54284U_201201_044215/52953165/ccs	chr1	+	185	1	Intergenic	novelGene_221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	936	False	NA	NA	False	NA	NA	NA	85682026	85682211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_85682000_85682200
m54284U_201201_044215/52954223/ccs	chrX	-	2052	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	168	junction_10	371.664893941343	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100129011	100122815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127701_100127881_100128877
m54284U_201201_044215/53020758/ccs	chr11	-	2412	16	NIC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_9	79.1358887540216	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGTGGCTTGTCTG	NA	False	NA	-4	True	AATAAA	-21	NA	86435631	86392858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
m54284U_201201_044215/5310586/ccs	chr7	-	2349	11	NIC	ENSMUSG00000030970.17	novel	2321	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	311.11800012214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	False	NA	6	True	AGTAAA	-13	NA	132725585	132589349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869_132725086_132725386
m54284U_201201_044215/53151009/ccs	chr5	-	2824	13	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	229.686183858663	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347856	52307544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_52308121_52309151_52309322_52311378_52311507_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
m54284U_201201_044215/53152167/ccs	chr12	+	3933	11	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1736	junction_1	199.252628589939	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504649	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
m54284U_201201_044215/53216687/ccs	chr4	-	174	1	Intergenic	novelGene_2310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAGTCTTAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	141402043	141401869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_141401900_141402000
m54284U_201201_044215/53217548/ccs	chr11	+	1298	4	NNC	ENSMUSG00000020392.9	novel	1832	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	504.667107001129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGGTTCAAGTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51858487	51868161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_51858785_51860970_51861071_51866726_51867028_51867561
m54284U_201201_044215/53281347/ccs	chr7	+	2152	9	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	0	391	intron_retention	FALSE	canonical	3	1130	junction_6	71.7459711412425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGCTGTCCCTTTGA	NA	False	NA	32	True	AATAAA	-22	NA	15832532	15851055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15848151_15849127_15849197_15849524_15849576_15850388
m54284U_201201_044215/53281402/ccs	chr1	+	3501	16	NIC	ENSMUSG00000025915.15	novel	3680	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_9	34.1285152849572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGGACTATTTCATGCT	9863	False	NA	NA	False	ATTAAA	-16	NA	9918545	9971070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_9918611_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
m54284U_201201_044215/53281533/ccs	chr11	-	6007	26	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_24	49.1211726244397	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148401	86101506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029
m54284U_201201_044215/53282291/ccs	chr7	+	2086	12	ISM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	648	2	0	0	3prime_fragment	FALSE	canonical	3	60	junction_1	50.8389126685683	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070190	127075929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
m54284U_201201_044215/53282938/ccs	chr13	+	2533	12	NNC	ENSMUSG00000035762.12	novel	2857	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	71.3748109374984	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGTAATTTATTTGTT	NA	False	NA	21	True	ATTAAA	-22	NA	84370430	84443989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430870_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
m54284U_201201_044215/53283209/ccs	chr14	-	2919	17	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_15	19.957767911267	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTCTTGTCATGTT	7526	False	NA	NA	False	AATAAA	-20	NA	27230417	27204363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27228607_27228673_27230378
m54284U_201201_044215/53283568/ccs	chr5	-	3618	19	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	0	-1969	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	243.053092051008	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996393	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27993640_27993776_27996196
m54284U_201201_044215/53346574/ccs	chr5	+	671	2	Intergenic	novelGene_2449	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCTACCAAAGTTTAT	48	False	NA	NA	False	NA	NA	NA	3343974	3348070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_3344033_3347457
m54284U_201201_044215/53346663/ccs	chr9	+	1361	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-147	at_least_one_novel_splicesite	FALSE	canonical	2	841	junction_6	5901.11588317554	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084323_64084602_64084760_64085002_64085087_64085178_64085300_64085504
m54284U_201201_044215/53347693/ccs	chr2	+	2685	14	NIC	ENSMUSG00000027575.20	novel	2714	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	65.799947842644	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGGTTTGTGTGTCT	4065	False	NA	-41	True	NA	NA	NA	180609057	180624253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_180609123_180609326_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
m54284U_201201_044215/53348504/ccs	chr5	-	3757	17	ISM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	26667	174	6394	-174	3prime_fragment	FALSE	canonical	3	71	junction_16	13.9239003156443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTAGGTTTTTTTATTG	NA	False	NA	-15	True	ATTAAA	-14	NA	41974991	41945054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550
m54284U_201201_044215/53412170/ccs	chr10	-	2772	14	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_12	62.3803944318041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGTCTCATGGATTCCA	NA	False	NA	-3	True	ATTAAA	-16	NA	79390955	79376078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385688_79386149_79386241_79390907
m54284U_201201_044215/53412581/ccs	chr7	+	2334	8	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	331.480537797886	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201201_044215/53413598/ccs	chr1	-	2867	18	NIC	ENSMUSG00000052748.15	novel	3688	20	NA	NA	58	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	42.2765651215601	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGCTTTTCCGTTTACT	NA	False	NA	0	True	AATAAA	-18	NA	151304129	151243449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151295850_151295935_151297784_151297872_151299257_151299357_151304047
m54284U_201201_044215/53414168/ccs	chrX	-	5267	5	NIC	ENSMUSG00000059708.13	novel	6003	7	NA	NA	0	135	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	23.710493457539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGACTATTGACTGATCA	NA	False	NA	NA	False	AATAAA	-18	NA	35909048	35871831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35908702
m54284U_201201_044215/53543750/ccs	chr5	+	3684	10	NIC	ENSMUSG00000029330.9	novel	3924	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	17.1399468429099	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCGCTGCTGTTTTCTA	NA	False	NA	10	True	AATAAA	-19	NA	101912995	101971724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_101913356_101929240_101929369_101939340_101939438_101944869_101944968_101946242_101946383_101954428_101954488_101962265_101962419_101963714_101963835_101965718_101965823_101969299
m54284U_201201_044215/53544208/ccs	chr17	+	765	4	NNC	ENSMUSG00000015575.16	novel	823	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_3	528.401993435553	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGCTCCAGTGTTTAAAA	NA	False	NA	37	True	AATAAA	-25	NA	26895385	26918621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_26895553_26901651_26901700_26914328_26914443_26918185
m54284U_201201_044215/53544427/ccs	chr9	-	4157	24	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_23	184.164829188472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946499	109913387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109945745_109945861_109946425
m54284U_201201_044215/53609000/ccs	chr7	+	7087	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	65.3807226091062	174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTAAGCTCTTTGG	2093	False	NA	28	True	AATAAA	-16	NA	101583317	101664162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101583383_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
m54284U_201201_044215/53609925/ccs	chr4	+	4730	19	NIC	ENSMUSG00000057530.15	novel	4816	20	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_1	12.6238310789994	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTGTGTCTGTGTGTCTG	NA	False	NA	16	True	AATAAA	-16	NA	137589547	137692540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137589693_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
m54284U_201201_044215/53675292/ccs	chr1	+	3240	13	NNC	ENSMUSG00000026159.14	novel	8044	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_8	147.369056755103	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAGTTATGAATTTTG	NA	False	NA	14	True	ATTAAA	-20	NA	82817203	82874102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863834_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
m54284U_201201_044215/53676625/ccs	chr15	-	2885	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	62	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	174.476242462043	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	False	NA	-12	True	AATAAA	-12	NA	94487698	94475831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94487632
m54284U_201201_044215/53741019/ccs	chr18	-	5334	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-287	-90	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_23	38.3663862233171	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTTATTAGATGCCT	NA	False	NA	-112	True	AATAAA	-17	NA	21029437	20950369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000873_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
m54284U_201201_044215/5376567/ccs	chr2	-	3582	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	560	junction_18	74.5232791535804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017564	4995534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012244_5013290_5013624_5015499_5015587_5017515
m54284U_201201_044215/53871142/ccs	chr15	+	177	1	Intergenic	novelGene_7641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACGCCTGACAGTAAAG	3181	False	NA	NA	False	NA	NA	NA	12139759	12139936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_12139800_12139900
m54284U_201201_044215/53873291/ccs	chr13	+	275	1	Intergenic	novelGene_7149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATCAGTATGCTGGGTCT	NA	False	NA	NA	False	AATAAA	-21	NA	62823972	62824247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62824000_62824200
m54284U_201201_044215/54068859/ccs	chr1	-	3860	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	80.9882744088055	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853651	33800625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
m54284U_201201_044215/54069267/ccs	chr15	+	235	1	Intergenic	novelGene_7960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTTACCATGTGCATGC	NA	False	NA	NA	False	NA	NA	NA	99181214	99181449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99181200_99181400
m54284U_201201_044215/54132849/ccs	chr14	+	2355	8	NIC	ENSMUSG00000063506.15	novel	2148	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	2.66496544373966	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGCCTGTCACCAGCCTC	NA	False	NA	NA	False	ATTAAA	-15	NA	33041659	33091891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_33041890_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
m54284U_201201_044215/54135251/ccs	chr2	+	176	1	Intergenic	novelGene_999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAACTGCTAATGGGGA	NA	False	NA	NA	False	NA	NA	NA	118947162	118947338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_118947200_118947300
m54284U_201201_044215/54198633/ccs	chr14	-	2501	13	NIC	ENSMUSG00000022185.20	novel	2494	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_12	154.077429127912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	3758	False	NA	-1	True	AATAAA	-24	NA	54891138	54879618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890775_54890991
m54284U_201201_044215/54198897/ccs	chr16	+	4720	18	NIC	ENSMUSG00000022797.17	novel	4890	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	103.076851767224	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTGTCGGACTCATTT	8020	False	NA	14	True	AATAAA	-15	NA	32427800	32451608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
m54284U_201201_044215/54264780/ccs	chr8	+	2754	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	37	junction_11	40.1631222502545	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022322	72039352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_72022486_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
m54284U_201201_044215/54265191/ccs	chr6	-	6789	20	NIC	ENSMUSG00000063455.17	novel	10968	20	NA	NA	-230	-1562	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	11.9845237228797	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGGTGGTTTCATTGT	NA	False	NA	NA	False	AATACA	-25	NA	38231174	38104516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_38105511_38107716_38107863_38113768_38113927_38116357_38116405_38119526_38119845_38124054_38124209_38125270_38125495_38126490_38126697_38132064_38132181_38134982_38135180_38145025_38145211_38151082_38151261_38154541_38154691_38155765_38155826_38158248_38158433_38160899_38161028_38167485_38167664_38168610_38168700_38171318_38174025_38230802
m54284U_201201_044215/54266336/ccs	chr1	+	9117	14	NIC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	477.537730471288	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555675	118612898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_118555833_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
m54284U_201201_044215/5439586/ccs	chr14	-	3707	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7205	intron_retention	FALSE	canonical	3	358	junction_3	52.091548371734	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998587	62930457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
m54284U_201201_044215/54396032/ccs	chr6	-	2711	2	Intergenic	novelGene_3385	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGATTTATTAGGTG	NA	False	NA	-5	True	NA	NA	NA	88670421	88644033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_88646658_88670334
m54284U_201201_044215/54396457/ccs	chr4	-	4028	11	NIC	ENSMUSG00000028454.17	novel	4239	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_10	46.9541265492182	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	5675	False	NA	-7	True	AATAAA	-21	NA	43025756	43017634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025285
m54284U_201201_044215/54396798/ccs	chr2	+	1009	6	NNC	ENSMUSG00000002728.15	novel	1142	6	NA	NA	0	-107	at_least_one_novel_splicesite	FALSE	canonical	3	156	junction_4	440.981178736689	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGGAAGTTTGTTG	NA	False	NA	-43	True	AGTAAA	-18	NA	145745181	145758238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757458_145757600_145757723
m54284U_201201_044215/5440116/ccs	chr5	-	3589	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	0	-691	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_8	55.3628836756982	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23881012	23711140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
m54284U_201201_044215/5440142/ccs	chr1	+	3559	2	NIC	ENSMUSG00000097814.6	novel	410	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATCATCTCTATTATTT	NA	False	NA	5	True	NA	NA	NA	96799957	96808959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_96800116_96805558
m54284U_201201_044215/5440207/ccs	chr7	-	2068	9	NNC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	-565	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_8	184.947289788199	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27010668	27004564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27010313
m54284U_201201_044215/5440594/ccs	chr3	-	1509	7	NIC	ENSMUSG00000028104.15	novel	1427	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	65	junction_5	14.8436293854749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTAACAGAGTGATGT	NA	False	NA	0	True	NA	NA	NA	96501475	96485187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_96485905_96487113_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
m54284U_201201_044215/5441199/ccs	chr17	-	2344	9	NIC	ENSMUSG00000023940.15	novel	3628	9	NA	NA	0	-1268	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	149.294538999255	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATGTGTGTATGTATG	NA	False	NA	-3	True	AATAAA	-24	NA	53996314	53983081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996207
m54284U_201201_044215/5441464/ccs	chr5	-	180	1	Intergenic	novelGene_2681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAGAACTTAAA	NA	False	NA	NA	False	NA	NA	NA	93229129	93228949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_93228900_93229100
m54284U_201201_044215/54460898/ccs	chr11	+	4166	20	NIC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_15	34.6020510816653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022222	50062857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
m54284U_201201_044215/54526907/ccs	chr5	-	3822	10	NIC	ENSMUSG00000041609.17	novel	3026	9	NA	NA	-654	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	7.26907877057606	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTGCCTCAGTTCCT	NA	False	NA	-3	True	AATAAA	-14	NA	115870334	115786235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_115787629_115789877_115789999_115793959_115794091_115799433_115799578_115800758_115800978_115801765_115801946_115808212_115808360_115811138_115811256_115862599_115862816_115869180
m54284U_201201_044215/54527080/ccs	chr3	+	3116	13	NIC	ENSMUSG00000042626.14	novel	2617	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	152.973558898988	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCTCTGGAAAGTCTGA	NA	False	NA	32	True	ATTAAA	-29	NA	89328934	89337334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89329056_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
m54284U_201201_044215/54527781/ccs	chrX	+	147	1	Intergenic	novelGene_9662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCGCAAAAGGAAGGTGAT	6251	False	NA	NA	False	NA	NA	NA	149790707	149790854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_149790700_149790900
m54284U_201201_044215/54594155/ccs	chr14	+	3401	9	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	1263	intron_retention	FALSE	canonical	3	6333	junction_1	614.086605760946	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTGACATTGGCAGGG	NA	False	NA	17	True	AATAAA	-12	NA	63359962	63380575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
m54284U_201201_044215/54658430/ccs	chr8	+	2718	12	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	1667	0	-61	0	3prime_fragment	FALSE	canonical	1	37	junction_10	35.20847005532	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72023237	72039352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
m54284U_201201_044215/54658600/ccs	chr9	-	1136	11	NIC	ENSMUSG00000090626.10	novel	2054	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_2	56.7235400869868	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTGGTGAAATAAACAGA	7876	False	NA	-32	True	AATAAA	-14	NA	72399243	72368384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_72368561_72369137_72369273_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
m54284U_201201_044215/54723129/ccs	chr13	-	4007	10	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	59	0	intron_retention	FALSE	canonical	3	63	junction_8	236.569933282599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGGCTGCTCTCT	NA	False	NA	-5	True	AATAAA	-28	NA	54835562	54827211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831903_54832150_54832302_54835306
m54284U_201201_044215/54855459/ccs	chr1	+	3249	9	NIC	ENSMUSG00000070871.11	novel	3281	11	NA	NA	100	0	intron_retention	FALSE	canonical	3	8	junction_3	34.7589916424513	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCGAGTGTGTTTGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	64730080	64764803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_64730560_64740127_64740203_64741504_64741540_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
m54284U_201201_044215/54856230/ccs	chr5	-	2472	10	NIC	ENSMUSG00000037373.13	novel	2279	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	693	junction_8	73.9275588033129	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGGCACCAGTTTTAAT	NA	False	NA	-14	True	AATAAA	-21	NA	33432338	33405066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
m54284U_201201_044215/54920573/ccs	chrX	+	3351	15	NNC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	87.7774609627165	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258636	70358901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357254
m54284U_201201_044215/54921728/ccs	chr4	-	3635	11	NNC	ENSMUSG00000044700.16	novel	3697	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	103.549022206876	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTATCAGGCTGTGTT	NA	False	NA	-9	True	AATAAA	-17	NA	149822501	149799839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_149801535_149802476_149802615_149803107_149803348_149803968_149804041_149806663_149806897_149811683_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
m54284U_201201_044215/55050961/ccs	chr16	-	3385	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	159	junction_9	38.6317644321418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201201_044215/5505201/ccs	chr19	-	187	1	Intergenic	novelGene_9318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTATAAGCTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	46744550	46744363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_46744400_46744600
m54284U_201201_044215/5505494/ccs	chrX	+	2169	6	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	48.3553513067582	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCTGTCTTTTTATTC	NA	False	NA	12	True	AATAAA	-18	NA	55777146	55838706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55837203
m54284U_201201_044215/5505599/ccs	chr7	-	192	1	Intergenic	novelGene_3608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCACTTGCTGCTCTTCC	NA	False	NA	NA	False	NA	NA	NA	3273561	3273369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3273400_3273600
m54284U_201201_044215/5505692/ccs	chr6	-	181	1	Intergenic	novelGene_3154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGACCCACCCCCTGGGG	NA	False	NA	NA	False	NA	NA	NA	30344061	30343880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_30343900_30344100
m54284U_201201_044215/55118321/ccs	chr5	-	1715	6	NIC	ENSMUSG00000025856.16	novel	1287	7	NA	NA	0	132	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	151.854667363239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGATGCGCCTCTG	NA	False	NA	-9	True	AATAAA	-22	NA	138981842	138962138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138981488
m54284U_201201_044215/55183061/ccs	chr6	-	8437	39	NIC	ENSMUSG00000030091.18	novel	7037	40	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	302	junction_33	44.9858395695007	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATGCGGTGGTTCTTGGGG	NA	False	NA	-2	True	AATAAA	-20	NA	91093811	90990049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_90991479_90992805_90992890_90992967_90993064_90994313_90994531_90995718_90995970_90997124_90997272_90998378_90998503_91002203_91003962_91005707_91005884_91007065_91007241_91008603_91008696_91011705_91011865_91013334_91013467_91014606_91014688_91017528_91017709_91017829_91017893_91019236_91019373_91019487_91019616_91020728_91020858_91030353_91030456_91030546_91030652_91031371_91031479_91032206_91032400_91037543_91037718_91039699_91039922_91042139_91042286_91046145_91046345_91047113_91047270_91048823_91048962_91050174_91050316_91051229_91051337_91052888_91052958_91053539_91053699_91062840_91062974_91064814_91064966_91066816_91066914_91075547_91075680_91078244_91078382_91093599
m54284U_201201_044215/55247904/ccs	chr17	-	6163	32	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_19	79.9261235374598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783389	56719430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
m54284U_201201_044215/55248750/ccs	chr19	+	3232	2	NIC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384488	38394058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38384750_38391087
m54284U_201201_044215/55248769/ccs	chr14	-	3674	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7205	intron_retention	FALSE	canonical	3	25	junction_12	129.812961002708	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998587	62930457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951289_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
m54284U_201201_044215/55313472/ccs	chr5	-	2783	1	Genic_Genomic	ENSMUSG00000041132.12	novel	NA	NA	NA	NA	-6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATATGTCTTGTCTTTCAA	4554	False	NA	NA	False	AATAAA	-17	NA	150517999	150515216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_-_150515200_150518000
m54284U_201201_044215/55313880/ccs	chr15	+	2230	5	NIC	ENSMUSG00000035828.12	novel	2427	6	NA	NA	290	0	intron_retention	FALSE	canonical	3	800	junction_2	52.3993082015402	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTCTGTTTATTGGACT	NA	False	NA	30	True	ATTAAA	-20	NA	88746678	88749929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_88746956_88747040_88747295_88747381_88747752_88748518_88748696_88748777
m54284U_201201_044215/55313898/ccs	chr13	-	1103	1	Antisense	novelGene_ENSMUSG00000021488.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	55455177	55454074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_-_55454100_55455200
m54284U_201201_044215/55314636/ccs	chr2	-	3546	5	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_4	109.161291216255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26279160
m54284U_201201_044215/55378064/ccs	chr12	+	174	1	Intergenic	novelGene_6700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTTAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	71122923	71123097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_71122900_71123100
m54284U_201201_044215/55443607/ccs	chr17	-	178	1	Intergenic	novelGene_8537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATCCAAAGTTCAAA	NA	False	NA	NA	False	NA	NA	NA	34014445	34014267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_34014300_34014400
m54284U_201201_044215/55443608/ccs	chr8	-	2098	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	148.130479270435	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325913	4309730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_4310256_4310511_4310931_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
m54284U_201201_044215/55444114/ccs	chr5	-	187	1	Intergenic	novelGene_3036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTACTCCATTTGTGGCTG	NA	False	NA	NA	False	NA	NA	NA	142713135	142712948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142712900_142713100
m54284U_201201_044215/55510299/ccs	chr3	-	3401	25	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_17	234.13700879803	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/55574995/ccs	chr11	+	3688	23	NNC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	103.219746733377	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072425	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105131744_105131807_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
m54284U_201201_044215/55575323/ccs	chr2	+	5499	17	NNC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_15	62.5731759122869	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4625	False	NA	33	True	AATAAA	-25	NA	20524430	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20812712_20812836_20813520
m54284U_201201_044215/55576986/ccs	chr12	-	172	1	Intergenic	novelGene_6881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCCAGAGCAAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	106138532	106138360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_106138400_106138500
m54284U_201201_044215/55640112/ccs	chr5	-	1647	8	NIC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_1	1844.95411148066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126797	100108860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
m54284U_201201_044215/55640922/ccs	chr1	+	4554	24	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_12	31.0798106715592	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201201_044215/55642086/ccs	chr4	-	4569	13	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	297.926445060969	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
m54284U_201201_044215/55705631/ccs	chr11	+	959	3	NIC	ENSMUSG00000002064.11	novel	1268	3	NA	NA	305	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	108	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGGTCATTTATTAAG	NA	False	NA	19	True	NA	NA	NA	78136876	78146322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78136997_78141841_78142039_78145680
m54284U_201201_044215/55706682/ccs	chr16	-	3020	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	359.259015196557	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6230	False	NA	-4	True	NA	NA	NA	38370620	38345501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355024_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
m54284U_201201_044215/55707990/ccs	chr3	+	2829	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_23	128.335503580615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629977_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/55708399/ccs	chr4	+	4550	15	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	98.6621994070512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTATGTGTGTAACCAT	-33	True	NA	33	True	AATAAA	-33	NA	53440412	53567818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_53440717_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
m54284U_201201_044215/5571352/ccs	chr10	+	159	1	Intergenic	novelGene_5327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATAAAGTAAATAAATAATC	NA	False	NA	NA	False	NA	NA	NA	61025350	61025509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61025400_61025500
m54284U_201201_044215/5571942/ccs	chr19	-	1534	7	NIC	ENSMUSG00000059326.8	novel	1849	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_5	19.9728983041187	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTTTTGTTTTCTTTTG	9871	False	NA	-2	True	NA	NA	NA	61215121	61212839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214494_61214652_61214823_61214962
m54284U_201201_044215/55773277/ccs	chr7	-	177	1	Intergenic	novelGene_3797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAGTTCAAGGCC	NA	False	NA	NA	False	NA	NA	NA	37834817	37834640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_37834600_37834800
m54284U_201201_044215/55773295/ccs	chr17	-	1886	6	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	135	junction_1	856.009719570987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80510119_80510174_80511559_80511662_80511741_80512868_80513276_80513458_80514603
m54284U_201201_044215/55773357/ccs	chr10	+	4462	26	NNC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_13	63.8948386021907	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGGATTCTTTGGCTT	NA	False	NA	20	True	AATAAA	-29	NA	128139203	128157227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
m54284U_201201_044215/55836958/ccs	chr8	-	7690	49	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	325.564507070241	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
m54284U_201201_044215/55838031/ccs	chr2	-	3121	4	NNC	ENSMUSG00000087179.9	novel	388	3	NA	NA	0	6269	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	69.1391511534689	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTTTCTCTCGAGTTA	NA	False	NA	-1	True	NA	NA	NA	156681740	156668699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_156671325_156679742_156679834_156680337_156680457_156681454
m54284U_201201_044215/55839122/ccs	chr5	-	1746	5	ISM	ENSMUSG00000029603.16	ENSMUST00000145174.8	2961	8	12278	0	-210	0	3prime_fragment	FALSE	canonical	3	95	junction_3	13.57156954814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGCCTTTTTCTGCCAA	NA	False	NA	-19	True	AATAAA	-15	NA	120821190	120818267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_120819538_120820185_120820276_120820368_120820531_120820644_120820804_120821125
m54284U_201201_044215/55902330/ccs	chr19	-	620	2	NIC	ENSMUSG00000024844.16	novel	758	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	935	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGTGTTCTGTGTCAG	8986	False	NA	-8	True	AATAAA	-15	NA	5416391	5414667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5415187_5416290
m54284U_201201_044215/55903121/ccs	chr4	+	3924	6	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43735	1183	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	163.466693855354	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	145508071	145557695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_145508210_145510590_145510684_145541336_145541406_145551778_145551837_145552678_145552806_145554256
m54284U_201201_044215/56034585/ccs	chr8	+	892	4	NIC	ENSMUSG00000015013.10	novel	1659	5	NA	NA	0	-1071	intron_retention	FALSE	canonical	3	528	junction_1	87.3473271231327	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTACGTTGTCCTGTGTC	5517	False	NA	24	True	ACTAAA	-16	NA	123338379	123342328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_123338433_123339804_123339978_123340659_123341127_123342129
m54284U_201201_044215/56101016/ccs	chr15	-	4755	13	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	236.29325000939	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618436	88571236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_88572680_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
m54284U_201201_044215/56165188/ccs	chr2	-	2784	13	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	236.12371698375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTACTTGTTGCTTT	NA	False	NA	-8	True	NA	NA	NA	124965543	124929660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
m54284U_201201_044215/56166314/ccs	chr5	-	599	3	NNC	ENSMUSG00000104529.5	novel	520	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTCGCCTCCTATTC	3477	False	NA	0	True	AATAAA	-19	NA	143151506	143150533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_143150848_143151105_143151305_143151420
m54284U_201201_044215/56232656/ccs	chr4	+	3973	8	NIC	ENSMUSG00000028710.19	novel	2160	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	354	junction_5	25.5550625999976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGCTGATGAATCACTA	NA	False	NA	-48	True	NA	NA	NA	115642180	115669068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115657623_115668198
m54284U_201201_044215/56361689/ccs	chr11	+	2226	3	NIC	ENSMUSG00000020392.9	novel	1832	3	NA	NA	0	0	intron_retention	FALSE	canonical	2	20	junction_1	543	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGGTTCAAGTTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	51858487	51868161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_51859179_51860970_51861071_51866726
m54284U_201201_044215/56361908/ccs	chr17	-	6725	34	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_23	82.016191373307	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783483	56719430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56735967_56736098_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
m54284U_201201_044215/5636224/ccs	chr5	+	3799	21	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	225.20792614826	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201201_044215/5636661/ccs	chr4	+	4210	21	NIC	ENSMUSG00000028830.15	novel	4384	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	15.138031576133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647586	126748129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126647639_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
m54284U_201201_044215/5637273/ccs	chr5	-	4189	27	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	466	junction_5	100.698448422967	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201201_044215/56494177/ccs	chrX	-	186	1	Intergenic	novelGene_9708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATCATCCTGAGTGA	NA	False	NA	NA	False	NA	NA	NA	159195175	159194989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_159195000_159195200
m54284U_201201_044215/56494288/ccs	chr10	-	2707	11	NIC	ENSMUSG00000062866.17	novel	8556	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	14.8727939540626	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTATCTCCAAAGTCAG	NA	False	NA	-6	True	AATAAA	-21	NA	13350156	13089138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13142716_13142798_13167538_13167707_13349799
m54284U_201201_044215/56558366/ccs	chr19	+	2596	9	NIC	ENSMUSG00000024835.16	novel	1888	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	402	junction_1	84.6935652809586	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGACCTACTGTTGTGG	3613	False	NA	18	True	AATAAA	-19	NA	4198655	4204034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_4198729_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520
m54284U_201201_044215/56559639/ccs	chr12	-	5301	33	NIC	ENSMUSG00000051166.11	novel	7595	44	NA	NA	0	-333	combination_of_known_junctions	FALSE	canonical	3	20	junction_30	6.85843174038351	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCTTTAAAAGTCTGA	NA	False	NA	NA	False	CATAAA	-1	NA	98867743	98767032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_98767371_98768542_98768717_98771725_98771747_98776777_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839465_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
m54284U_201201_044215/56560208/ccs	chr4	-	3789	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	155	junction_8	410.529904476076	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059116_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201201_044215/56623663/ccs	chr17	+	1971	9	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	-22088	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	45.5286654208093	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATATGTATTTATGTATA	NA	False	NA	NA	False	AATAAA	-24	NA	29768764	29803780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802939
m54284U_201201_044215/56690282/ccs	chr7	-	760	5	NNC	ENSMUSG00000025102.15	novel	405	4	NA	NA	0	1893	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	126.089254102005	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATCTAAGCCTACAAC	NA	False	NA	NA	False	NA	NA	NA	81439217	81430036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_81430319_81432778_81432887_81435824_81435953_81438197_81438325_81439102
m54284U_201201_044215/56820436/ccs	chr3	+	517	5	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	88	junction_1	756.677730278882	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTCTGTGAACTGTG	7591	False	NA	20	True	AATAAA	-14	NA	89153740	89157029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89153823_89154087_89154240_89154371_89154436_89156380_89156448_89156877
m54284U_201201_044215/56885439/ccs	chr4	-	2154	7	ISM	ENSMUSG00000008305.19	ENSMUST00000030095.11	2569	20	-767	39375	0	0	5prime_fragment	FALSE	canonical	3	29	junction_1	99.9656885580692	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCCTGTGTTCTAATTA	NA	False	NA	0	True	AATAAA	-20	NA	72119156	72075816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_-_72076655_72087328_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
m54284U_201201_044215/56887633/ccs	chr4	+	3063	15	NNC	ENSMUSG00000011257.20	novel	3019	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_14	92.6910602650613	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGCCAGTTTTATGTT	NA	False	NA	8	True	AATAAA	-31	NA	123176617	123192625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191845_123192305
m54284U_201201_044215/56887993/ccs	chr7	-	3944	6	NNC	ENSMUSG00000096916.8	novel	6163	6	NA	NA	0	1644	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_5	28.6454184818445	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAATTGTGAGTCCATTA	NA	False	NA	-9	True	AATAAA	-19	NA	27713540	27686492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27689948_27704643_27704743_27706738_27706866_27707808_27707862_27711760_27711876_27713445
m54284U_201201_044215/56951158/ccs	chr2	+	1382	4	NIC	ENSMUSG00000026857.10	novel	837	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	225.252944240223	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGGATGTATGT	NA	False	NA	27	True	AATAAA	-33	NA	30698124	30713045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_30698378_30709640_30709845_30710460_30710714_30712373
m54284U_201201_044215/56952065/ccs	chr2	+	8409	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	155.681824404222	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962843	52012395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51962879_51963148_51963266_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201201_044215/56953471/ccs	chr9	+	2452	7	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1453	junction_4	118.273341600436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATTTTTGCTTCTA	NA	False	NA	16	True	AATAAA	-16	NA	65537840	65567810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558987_65566416_65566487_65566719
m54284U_201201_044215/56953507/ccs	chr2	+	2428	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	433	junction_10	614.848566721921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
m54284U_201201_044215/5703781/ccs	chr17	-	1840	12	NIC	ENSMUSG00000024055.16	novel	1752	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	129	junction_11	13.6369696835023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGCATCAGACCAAAAT	NA	False	NA	-7	True	AATAAA	-29	NA	33166376	33143661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151657_33160029_33160175_33165778_33165978_33166286
m54284U_201201_044215/5704298/ccs	chr4	+	2797	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	136.523294715591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21871437_21871609_21873585_21874673_21874912
m54284U_201201_044215/57082246/ccs	chr11	+	4327	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	intron_retention	FALSE	canonical	3	2354	junction_11	204.801186621725	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332202	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
m54284U_201201_044215/57082983/ccs	chr11	-	4695	14	NNC	ENSMUSG00000018412.17	novel	5061	15	NA	NA	-609	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_10	70.7434735735703	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAAAATGAAAAAAA	9723	False	NA	-46	True	NA	NA	NA	104360296	104224370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
m54284U_201201_044215/57150184/ccs	chr2	+	1782	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	0	-435	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	258.285906443723	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	164675726	164681504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_164675913_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
m54284U_201201_044215/57213998/ccs	chr3	+	2471	9	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-5	673	intron_retention	FALSE	canonical	3	910	junction_4	50.4256878981338	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTACTTATTACC	NA	False	NA	23	True	AATAAA	-27	NA	105866818	105875516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873742_105874478
m54284U_201201_044215/57214546/ccs	chr16	+	1313	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	1282.16103262431	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATGTCTGGTAATATT	NA	False	NA	32	True	ACTAAA	-32	NA	84571166	84619918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615650_84615664_84618147_84618191_84619674
m54284U_201201_044215/57215566/ccs	chr8	+	3760	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_16	85.4826878996885	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9251	False	NA	NA	False	AATAAA	-23	NA	70243899	70260399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256177_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
m54284U_201201_044215/57279716/ccs	chr2	-	4329	28	NIC	ENSMUSG00000027284.17	novel	5996	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_26	17.8771144441848	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6114	False	NA	NA	False	AATAAA	-15	NA	120561999	120548666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561674_120561892
m54284U_201201_044215/57279951/ccs	chr11	-	1107	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	991	0	0	0	3prime_fragment	FALSE	canonical	3	471	junction_7	49.073455978081	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGGTAATGCTTAAACA	9891	False	NA	0	True	AATAAA	-30	NA	69871087	69859049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
m54284U_201201_044215/57344083/ccs	chr3	+	2372	12	NIC	ENSMUSG00000027884.17	novel	2043	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	51.8028685507149	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6632	False	NA	6	True	AATAAA	-18	NA	108561264	108586156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108561662_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
m54284U_201201_044215/57345207/ccs	chr6	+	3547	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	186.808683885413	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTCAGAGCATTCC	NA	False	NA	12	True	ATTAAA	-17	NA	82923882	83007164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82982650_82983298_82983441_83003178_83003386_83005372_83005514_83006750
m54284U_201201_044215/57345978/ccs	chr8	+	1909	5	NIC	ENSMUSG00000031776.18	novel	2063	6	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	103.791859025648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGATGTGCATTGTCC	NA	False	NA	12	True	AGTAAA	-25	NA	95393295	95401053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_95393530_95394224_95394287_95396948_95397056_95398689_95398787_95399644
m54284U_201201_044215/57409664/ccs	chr9	+	2632	7	NNC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	240.667820865192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198865	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220150_59220520_59221035_59221135_59222013
m54284U_201201_044215/57411538/ccs	chr3	+	4565	12	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	344	junction_7	27.8348138040141	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-10	True	NA	13	True	AATAAA	-14	NA	88593120	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88617250_88618067
m54284U_201201_044215/57412010/ccs	chr11	-	185	1	Intergenic	novelGene_6020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAATGTAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	75702373	75702188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75702200_75702400
m54284U_201201_044215/57475177/ccs	chr11	+	4373	23	NIC	ENSMUSG00000020456.18	novel	702	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	139.064294839378	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241984	6306642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_6242292_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
m54284U_201201_044215/57475223/ccs	chr11	-	223	1	Intergenic	novelGene_5819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTGTCAAAAATCAAGTC	NA	False	NA	NA	False	ATTAAA	-10	NA	52107682	52107459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_52107500_52107700
m54284U_201201_044215/57476641/ccs	chr12	+	193	1	Intergenic	novelGene_6784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTCGGACCATCTTGGC	4429	False	NA	NA	False	NA	NA	NA	83637015	83637208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_83637000_83637200
m54284U_201201_044215/57477132/ccs	chr12	-	187	1	Intergenic	novelGene_6893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGCCAAGATTAATTATA	1730	False	NA	NA	False	NA	NA	NA	110433302	110433115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_110433100_110433300
m54284U_201201_044215/57540869/ccs	chr18	+	4554	7	NIC	ENSMUSG00000041915.10	novel	3385	8	NA	NA	55	1335	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	37.8832270126093	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTCTGCCTCTGTGTG	6976	False	NA	10	True	AATAAA	-17	NA	31892987	31917131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_31893248_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
m54284U_201201_044215/57541404/ccs	chr5	+	3201	19	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_2	100.199800399003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283743	110319838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110283801_110283916_110284061_110287982_110288056_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
m54284U_201201_044215/57541728/ccs	chr9	-	2264	8	NIC	ENSMUSG00000038895.17	novel	2108	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_7	10.0203873810001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	9426	False	NA	-1	True	ATTAAA	-22	NA	21982672	21966755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21969712_21976996_21977213_21979443_21979488_21982344
m54284U_201201_044215/5769630/ccs	chr12	+	1755	2	Intergenic	novelGene_6868	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTGGTTATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	105043743	105082790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105043885_105081176
m54284U_201201_044215/57738977/ccs	chr5	-	1904	10	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_9	388.340279702616	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650206	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649394_24650063
m54284U_201201_044215/57803426/ccs	chr6	+	1896	12	ISM	ENSMUSG00000068323.13	ENSMUST00000039212.8	5123	25	40018	1192	0	276	3prime_fragment	FALSE	canonical	3	368	junction_2	56.2057907078168	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5726	False	NA	7	True	AATAAA	-17	NA	83254374	83280734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
m54284U_201201_044215/57804588/ccs	chr2	-	7134	14	NIC	ENSMUSG00000039501.15	novel	7218	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	7.80911317120645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCATCTCTTATCTGT	960	False	NA	NA	False	AATAAA	-18	NA	166904935	166877712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904513
m54284U_201201_044215/57868787/ccs	chr14	-	3370	5	NIC	ENSMUSG00000022124.16	novel	4309	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	68.9759922001851	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTGTATTTTTATAAC	9813	False	NA	-4	True	AATAAA	-13	NA	103336990	103318469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_103320947_103326737_103326910_103329739_103329863_103332772_103332978_103336597
m54284U_201201_044215/57868943/ccs	chr8	-	3048	24	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_8	97.7241014284603	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175316	73094842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
m54284U_201201_044215/57870382/ccs	chr11	-	4146	17	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	191.022648771684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996860_119997259_119997437_119999292_119999380_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201201_044215/57871140/ccs	chr4	-	1193	8	NNC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	189.176302610522	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436533	108422066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108434240_108434286_108436181
m54284U_201201_044215/57934027/ccs	chr13	-	8124	20	NIC	ENSMUSG00000033799.11	novel	8338	20	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	17.621442490814	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGTAGTCTGTGTGC	NA	False	NA	NA	False	AATAAA	-15	NA	3661224	3616034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3632081_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649836_3649857_3649938_3650063_3650191_3650335_3660789
m54284U_201201_044215/57935496/ccs	chr7	-	1284	6	NNC	ENSMUSG00000058709.12	novel	2107	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_4	214.357085257287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTTGTATTCCTCTCTG	NA	False	NA	-3	True	AATAAA	-20	NA	26866227	26858082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864867_26865154_26866108
m54284U_201201_044215/57936417/ccs	chr4	+	1944	16	NIC	ENSMUSG00000028687.18	novel	1654	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	57	junction_1	44.8184485824011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTTCTGGGCTTTCTC	NA	False	NA	35	True	AATAAA	-25	NA	116664934	116676637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_116664969_116668045_116668139_116671515_116671634_116672760_116672910_116672995_116673036_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675480_116676451
m54284U_201201_044215/57936699/ccs	chr7	-	198	1	Intergenic	novelGene_3852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTGTATGTATCTGA	NA	False	NA	NA	False	NA	NA	NA	46506625	46506427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_46506400_46506600
m54284U_201201_044215/58001647/ccs	chr3	-	4079	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	232.539682810553	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3507	False	NA	99	True	AAAAAG	-18	NA	89959822	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201_044215/58066380/ccs	chr19	-	4065	18	NIC	ENSMUSG00000024969.16	novel	3018	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	83.0892712064523	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3860	False	NA	-1	True	AATAAA	-20	NA	7319225	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
m54284U_201201_044215/58067558/ccs	chr16	-	1551	9	ISM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	352	5136	0	-114	5prime_fragment	FALSE	canonical	3	1431	junction_2	88.070195724774	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTCTAGAGTACATTTT	9180	False	NA	2	True	AATAAA	-25	NA	91525511	91491345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_-_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
m54284U_201201_044215/58131324/ccs	chrX	-	770	4	NNC	ENSMUSG00000031059.10	novel	908	3	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	226	junction_3	964.303317887525	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGTTACTGCTGCTTT	NA	False	NA	-4	True	ATTAAA	-14	NA	20483808	20481564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_20481782_20481952_20482084_20483298_20483521_20483608
m54284U_201201_044215/58131450/ccs	chr12	+	2008	9	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	-51	combination_of_known_splicesites	FALSE	canonical	2	50	junction_4	2094.31098081804	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTCATGGCATACAAGT	NA	False	NA	21	True	AATAAA	-21	NA	24758239	24764094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
m54284U_201201_044215/58131677/ccs	chr18	-	5108	28	NIC	ENSMUSG00000024566.11	novel	5150	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_23	15.0636509600732	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTTGACCTGAGCGCCT	9744	False	NA	-30	True	AATAAA	-24	NA	80977275	80778289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
m54284U_201201_044215/58132758/ccs	chr1	+	6273	20	NIC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_16	31.4765884947638	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTAGTTTTAAATTTCAA	NA	False	NA	7	True	AATAAA	-16	NA	151631121	151697802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681698_151683116_151683309_151683954_151684121_151687269_151687456_151694060
m54284U_201201_044215/58196205/ccs	chr7	+	3432	5	ISM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	0	1374	0	0	intron_retention	FALSE	canonical	2	6	junction_1	12.051970793194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATTCTGCAGATGGG	NA	False	NA	NA	False	NA	NA	NA	12711774	12718267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772
m54284U_201201_044215/58196217/ccs	chr2	+	3603	20	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	352.616904643613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201201_044215/5832708/ccs	chr1	+	4215	11	NIC	ENSMUSG00000051223.15	novel	3876	12	NA	NA	0	-802	intron_retention	FALSE	canonical	3	1694	junction_10	91.8575527651374	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTTTTATAGATCAGTCT	891	False	NA	21	True	AATAAA	-16	NA	58432290	58445710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58442193_58442773_58442913_58443390_58443514_58444193
m54284U_201201_044215/58329254/ccs	chr4	-	3989	17	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	663	junction_5	171.951471624264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
m54284U_201201_044215/5833486/ccs	chr15	-	2945	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_1	121.853737461488	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
m54284U_201201_044215/5834018/ccs	chr9	+	4271	22	NIC	ENSMUSG00000034252.15	novel	5111	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	101.102920103797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974184	80051453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_79974855_79994711_79994806_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
m54284U_201201_044215/5834292/ccs	chr18	-	3850	29	NIC	ENSMUSG00000044252.19	novel	3956	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	126.821317938561	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAATGCTTTCAGAATT	NA	False	NA	-22	True	AATAAA	-25	NA	13074898	12888384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_12889153_12889244_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
m54284U_201201_044215/5835610/ccs	chr6	+	2197	6	NIC	ENSMUSG00000054226.14	novel	818	5	NA	NA	174	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	78.5636048052786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTTATTATGTC	3643	False	NA	24	True	NA	NA	NA	85892953	85907266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_85893090_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
m54284U_201201_044215/58393417/ccs	chr8	-	4428	4	NNC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	651	-740	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_3	100.141011689628	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTTTGATCCTGCTGGA	NA	False	NA	-9	True	AATAAA	-16	NA	89770139	89754602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_89755447_89756571_89760027_89768979_89769073_89770103
m54284U_201201_044215/58393576/ccs	chr11	-	1598	7	NNC	ENSMUSG00000020358.18	novel	2370	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_6	1144.51003587659	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTAAATGTGGGATG	NA	False	NA	-17	True	AATAAA	-22	NA	51497674	51491695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497411_51497493
m54284U_201201_044215/58394517/ccs	chr7	+	2148	12	NIC	ENSMUSG00000030796.18	novel	2140	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	97.4747265400093	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCCAAAAACCCAAAGGGGA	5487	False	NA	NA	False	AATAAA	-29	NA	44865233	44883059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44865331_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
m54284U_201201_044215/58395070/ccs	chr7	-	5112	1	Antisense	novelGene_ENSMUSG00000109511.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAATCAA	4813	False	NA	NA	False	AATAAA	-18	NA	44480876	44475764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_44475800_44480900
m54284U_201201_044215/58395108/ccs	chr7	-	1267	11	NNC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_7	429.563685615998	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130149024	130134255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141624_130141696_130144409_130144541_130147624_130147703_130148721
m54284U_201201_044215/58395200/ccs	chr5	+	4160	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_4	669.392660053375	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108217027_108217230_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/58460042/ccs	chr2	-	2983	15	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	154.502162985982	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652910	93525975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650379_93650495_93652731
m54284U_201201_044215/58524074/ccs	chr11	+	4007	25	ISM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	17702	-84	17702	0	3prime_fragment	FALSE	canonical	3	52	junction_14	14.9210887300119	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCATGCTCTGCTGTGTT	NA	False	NA	22	True	AATAAA	-18	NA	67235630	67262412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
m54284U_201201_044215/58524456/ccs	chr11	-	1149	6	ISM	ENSMUSG00000020799.17	ENSMUST00000108502.8	1403	8	3606	0	3606	0	3prime_fragment	FALSE	canonical	3	33	junction_5	9.09065454189081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGCACAGAGCTCTCA	NA	False	NA	-1	True	ATTAAA	-17	NA	72248516	72235547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72248310
m54284U_201201_044215/58591438/ccs	chr12	-	2555	25	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	0	-2334	intron_retention	FALSE	canonical	3	1685	junction_14	177.331590686926	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	False	NA	-11	True	AATAAA	-14	NA	13299164	13269307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
m54284U_201201_044215/58654954/ccs	chr19	+	2071	13	NIC	ENSMUSG00000025217.16	novel	2064	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_1	165.14917499037	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352190	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_45352326_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
m54284U_201201_044215/58655361/ccs	chr3	+	531	5	NIC	ENSMUSG00000042747.13	novel	582	5	NA	NA	67	0	combination_of_known_splicesites	FALSE	canonical	3	225	junction_1	697.396945791993	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTCTGTGAACTGTG	7658	False	NA	20	True	AATAAA	-14	NA	89153807	89157029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89153901_89154084_89154240_89154371_89154436_89156380_89156448_89156877
m54284U_201201_044215/58656083/ccs	chr11	-	183	1	Intergenic	novelGene_5824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAAAAGGGAGGG	3292	False	NA	NA	False	NA	NA	NA	52332794	52332611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_52332600_52332800
m54284U_201201_044215/58720804/ccs	chr2	-	4307	21	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	14.3993055388099	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACCGTTTAAGAAAACAT	NA	False	NA	1	True	AATAAA	-18	NA	38177402	37689002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38049818_38049863_38133413_38133485_38177124
m54284U_201201_044215/58788129/ccs	chr16	+	3104	8	NIC	ENSMUSG00000022884.17	novel	2208	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	521.17203082503	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566
m54284U_201201_044215/58852224/ccs	chr6	-	180	1	Intergenic	novelGene_3496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTTATTTATATGAGTA	3365	False	NA	NA	False	NA	NA	NA	124766194	124766014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_124766000_124766200
m54284U_201201_044215/58852598/ccs	chr1	+	7166	30	NIC	ENSMUSG00000041498.14	novel	8770	30	NA	NA	0	-1920	intron_retention	FALSE	canonical	3	34	junction_23	10.0298010170856	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGACCTTTCTTATTGA	NA	False	NA	38	True	AATAAA	-29	NA	136394080	136457329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047_136431178_136437882_136437984_136441471_136441561_136443591_136443817_136443997_136444180_136447366_136447523_136448927_136449048_136453519_136453595_136454512_136454646_136454983
m54284U_201201_044215/58853826/ccs	chr15	-	523	5	NNC	ENSMUSG00000058600.14	novel	886	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	777	junction_4	1906.75842400132	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGTCTGTTTGCTTTC	324	False	NA	-20	True	AATAAA	-27	NA	34443405	34440650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443312
m54284U_201201_044215/5898255/ccs	chr17	+	5312	20	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	41.9692540146769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGGGATAATGAG	NA	False	NA	NA	False	AATAAA	-22	NA	7437525	7570714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_7437843_7495311_7495429_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
m54284U_201201_044215/58982772/ccs	chr12	+	3430	8	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	0	-136	intron_retention	FALSE	canonical	3	465	junction_7	36.8189170544331	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTAGTACTTGTATT	NA	False	NA	17	True	AATAAA	-23	NA	59113707	59120648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115978_59116927_59117084_59117164_59117304_59118211
m54284U_201201_044215/58983052/ccs	chr16	-	184	1	Intergenic	novelGene_8119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCACAGACAAAGATGTA	NA	False	NA	NA	False	NA	NA	NA	18173087	18172903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18172900_18173100
m54284U_201201_044215/58985170/ccs	chr8	-	1497	4	ISM	ENSMUSG00000000792.3	ENSMUST00000000809.3	2928	15	4888	0	4888	0	3prime_fragment	FALSE	canonical	0	0	junction_2	1.4142135623731	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGGCCTGTGGCGTAA	NA	False	NA	NA	False	NA	NA	NA	71340513	71335532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_71336613_71337564_71337681_71338673_71338799_71340337
m54284U_201201_044215/5900336/ccs	chr1	+	3033	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	31.7940595429747	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468917	180518252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_180468963_180469481_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
m54284U_201201_044215/5900975/ccs	chr18	-	1357	9	NNC	ENSMUSG00000024583.4	novel	1998	9	NA	NA	51	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	401.332292963076	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGTCTTCGTCATTCT	NA	False	NA	-7	True	AATAAA	-19	NA	63825457	63797176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_63797404_63804652_63804758_63806868_63806946_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
m54284U_201201_044215/59048623/ccs	chr17	-	2751	6	NIC	ENSMUSG00000025730.15	novel	2466	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	152	junction_5	29.2328582249495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTCTGGCTTCATCT	NA	False	NA	-1	True	AGTAAA	-17	NA	26138701	26101087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26102883_26103553_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
m54284U_201201_044215/59049606/ccs	chr16	-	3215	19	NIC	ENSMUSG00000041974.11	novel	3282	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_17	72.4806487584407	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTGGTTTTAGTGTT	1947	False	NA	0	True	AATAAA	-18	NA	15964715	15707087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15958571_15958728_15964608
m54284U_201201_044215/59114381/ccs	chr2	-	2042	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	18.0765040867973	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	0	True	AATAAA	-20	NA	59712935	59682707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712821
m54284U_201201_044215/59114967/ccs	chr6	+	3086	18	NIC	ENSMUSG00000029629.18	novel	727	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_1	28.9182118357714	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGTATTTGAAATTCATA	19	True	NA	5	True	AATAAA	-16	NA	11907882	12081197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_11908017_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
m54284U_201201_044215/59179326/ccs	chr15	+	179	1	Intergenic	novelGene_7994	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTAAAAAAAATAAGAGATG	NA	False	NA	NA	False	NA	NA	NA	100569082	100569261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_100569100_100569300
m54284U_201201_044215/59179636/ccs	chr3	+	2808	9	NIC	ENSMUSG00000028048.12	novel	1779	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	268	junction_1	28.5326019668729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGTGCTATCTGTGAC	NA	False	NA	3	True	ATTAAA	-13	NA	89110234	89115988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89114759_89115130_89115295_89115618_89115736_89115823
m54284U_201201_044215/592173/ccs	chr6	-	246	2	Intergenic	novelGene_3400	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGCTCAAGATCTTCAA	NA	False	NA	NA	False	NA	NA	NA	95023518	95023219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_95023285_95023337
m54284U_201201_044215/59376669/ccs	chrX	-	3800	4	NNC	ENSMUSG00000050029.8	novel	3545	3	NA	NA	-748	-378	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	34.5671648951558	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGCTTGTCTCTTTAAT	NA	False	NA	-5	True	AATAAA	-17	NA	50107643	50093166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_50095628_50103847_50104161_50106502_50107328_50107442
m54284U_201201_044215/59441815/ccs	chr17	-	198	1	Intergenic	novelGene_8684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCCCAACCAAAAAAAAGAC	2117	False	NA	NA	False	NA	NA	NA	66493339	66493141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66493100_66493300
m54284U_201201_044215/59442182/ccs	chr4	-	3677	8	NNC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	3611.84824076064	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_119135565_119136130_119137712_119137928_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
m54284U_201201_044215/59442740/ccs	chr5	-	3681	17	NIC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	0	-690	combination_of_known_splicesites	FALSE	canonical	3	29	junction_15	81.8305938738685	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCCTTGCTTATTAC	NA	False	NA	-5	True	ATTAAA	-22	NA	23881012	23711139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
m54284U_201201_044215/59506835/ccs	chr5	-	2437	1	NIC	ENSMUSG00000004642.14	novel	1027	8	NA	NA	0	1723	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGACGACAGGAATA	NA	False	NA	NA	False	NA	NA	NA	33809682	33807245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_33807200_33809700
m54284U_201201_044215/59507816/ccs	chr6	-	4407	27	NNC	ENSMUSG00000030279.16	novel	3494	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	33.2941214136979	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTAACTCTTTGCCT	NA	False	NA	NA	False	AATAAA	-16	NA	143045833	142956653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965126_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143018268_143018421_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403_143045523_143045658
m54284U_201201_044215/59508047/ccs	chr3	-	2962	4	ISM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	37043	3134	-677	0	3prime_fragment	FALSE	canonical	3	166	junction_1	66.1379030679248	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102074966	102064032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153
m54284U_201201_044215/59572461/ccs	chr5	-	3333	16	NIC	ENSMUSG00000057541.15	novel	3407	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	92.6118782878309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGTAAAAATCTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	23988709	23945646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953753_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
m54284U_201201_044215/59572558/ccs	chr5	-	1608	7	NIC	ENSMUSG00000029507.17	novel	1868	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_4	232.058481613771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928525	110921533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928427
m54284U_201201_044215/59573271/ccs	chr4	-	4004	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	684	junction_3	51.3320781628867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
m54284U_201201_044215/59638220/ccs	chr17	-	157	1	Intergenic	novelGene_8476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTATCATTTATTT	NA	False	NA	NA	False	NA	NA	NA	29215599	29215442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29215400_29215600
m54284U_201201_044215/5963874/ccs	chr9	-	1959	5	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	3873	junction_2	307.597443910056	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_110769888_110771396_110771713_110772219_110772322_110773258_110773312_110774891
m54284U_201201_044215/59639842/ccs	chr13	+	1641	3	Intergenic	novelGene_7312	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	12	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTTTTGTAACTTAGT	1864	False	NA	2	True	AATAAA	-13	NA	113872543	113876376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_113872828_113872948_113873083_113875153
m54284U_201201_044215/59639941/ccs	chr11	+	2266	9	NIC	ENSMUSG00000038485.7	novel	7131	10	NA	NA	-141	-4904	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	8.78564169540279	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTAGTATTTACATTTC	NA	False	NA	NA	False	NA	NA	NA	97253119	97284464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97254250_97263891_97263957_97267262_97267368_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
m54284U_201201_044215/5965064/ccs	chr1	+	5217	5	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	18.6882315910308	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155911471	155944607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_155911667_155935156_155935334_155937333_155937916_155939338_155939441_155940446
m54284U_201201_044215/5965430/ccs	chr17	-	2543	8	NNC	ENSMUSG00000060475.14	novel	2051	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_2	233.876559103214	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTTGTTTTTTCCTT	NA	False	NA	-5	True	AATAAA	-15	NA	13211079	13185685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_13186939_13188291_13188447_13193623_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
m54284U_201201_044215/59703325/ccs	chr5	+	3191	11	NNC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	203.692513362666	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGTCCTGACTTCACT	1492	False	NA	28	True	AATAAA	-16	NA	115149204	115236849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233306_115233904_115234015_115235184
m54284U_201201_044215/59703771/ccs	chr17	-	182	1	Intergenic	novelGene_8704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGTTATACAGGCTTA	NA	False	NA	NA	False	NA	NA	NA	71131474	71131292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71131300_71131500
m54284U_201201_044215/59704310/ccs	chr3	+	5358	5	NIC	ENSMUSG00000053931.12	novel	2049	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	4254	junction_2	535.398216283917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGGCTGGTTATTTTCT	NA	False	NA	27	True	AATAAA	-27	NA	121220145	121251856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121248743_121250730
m54284U_201201_044215/59705190/ccs	chr8	-	2708	2	Intergenic	novelGene_4482	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTGCCTTGGTCGTGG	NA	False	NA	NA	False	NA	NA	NA	108408873	108404231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_108406856_108408789
m54284U_201201_044215/59705661/ccs	chr3	+	4345	16	NIC	ENSMUSG00000037643.15	novel	4708	18	NA	NA	0	-222	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	265.81117776012	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31049895	31106886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_31050235_31072698_31072821_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
m54284U_201201_044215/59706146/ccs	chr4	+	1365	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_2	270.430097252506	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407541	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_117407560_117410164_117410241_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
m54284U_201201_044215/59706158/ccs	chr17	+	2626	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	220.781728022433	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5622	False	NA	12	True	AATAAA	-23	NA	34128471	34134564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34128671_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
m54284U_201201_044215/59769964/ccs	chr16	+	295	1	Intergenic	novelGene_8120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCTATCCGGAAGGATT	NA	False	NA	NA	False	NA	NA	NA	18183276	18183571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18183300_18183600
m54284U_201201_044215/59770884/ccs	chr10	-	1910	5	NIC	ENSMUSG00000006736.10	novel	1556	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	545	junction_1	44.6227240315963	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	False	NA	0	True	AATAAA	-15	NA	126906130	126903148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126905383_126905983
m54284U_201201_044215/59834695/ccs	chr8	+	3493	19	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	87.2482091506754	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13155739	13197940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13155904_13165469_13165574_13171676_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
m54284U_201201_044215/59836342/ccs	chr3	-	1029	7	NNC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_6	620.417444593199	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTACGTTTATTGAACG	NA	False	NA	-8	True	AATAAA	-15	NA	129624784	129618567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624740
m54284U_201201_044215/59899992/ccs	chr7	+	449	5	NNC	ENSMUSG00000025508.14	novel	964	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	213	junction_1	6078.86463494623	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCCTTTAAACATTTTGT	2378	False	NA	27	True	AATAAA	-20	NA	141027543	141031263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_141027602_141027820_141027945_141028638_141028688_141030916_141031016_141031144
m54284U_201201_044215/59900346/ccs	chr2	+	2487	11	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	55	0	intron_retention	FALSE	canonical	3	17	junction_6	62.5275139438631	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367110	180384073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_180367245_180373672_180374366_180375509_180375610_180377635_180377767_180378479_180378577_180378799_180378897_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
m54284U_201201_044215/59900526/ccs	chr9	-	1341	5	NNC	ENSMUSG00000001348.16	novel	1419	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_4	83.7048385698222	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTGTCATCAAGGTTA	9074	False	NA	-19	True	AATAAA	-21	NA	22042949	22038022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_22038559_22038970_22039317_22040826_22040955_22041158_22041426_22042885
m54284U_201201_044215/59965501/ccs	chr2	+	2162	13	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_12	945.36081809481	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120452_130120816
m54284U_201201_044215/59966511/ccs	chr10	+	3033	7	NIC	ENSMUSG00000020331.10	novel	3195	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	29.8142396999972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGCGCAGCGTCTCATT	NA	False	NA	24	True	AATAAA	-14	NA	79552467	79571942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79553054_79560221_79560646_79564726_79564946_79566680_79566828_79569504_79569746_79569896_79570062_79570691
m54284U_201201_044215/60031185/ccs	chr17	+	1592	5	NIC	ENSMUSG00000015126.10	novel	1192	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	382	junction_1	32.0702354216492	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	4603	False	NA	28	True	AATAAA	-18	NA	25459143	25461772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25459339_25459417_25460232_25460661_25460836_25461132_25461197_25461427
m54284U_201201_044215/60096974/ccs	chr17	-	2336	3	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	2	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCATCCCTGCAGAAAG	7516	False	NA	NA	False	NA	NA	NA	27548992	27543023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_27544999_27545783_27545977_27548824
m54284U_201201_044215/60097527/ccs	chr16	+	2247	10	NIC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	-136	intron_retention	FALSE	canonical	3	142	junction_4	832.134203919857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGGGCCCGCAGAG	1394	False	NA	NA	False	AATAAA	-26	NA	20354268	20362670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361501_20362060
m54284U_201201_044215/60097668/ccs	chr2	+	3616	15	NIC	ENSMUSG00000019715.15	novel	4030	16	NA	NA	0	-941	intron_retention	FALSE	canonical	3	458	junction_8	45.7078678530674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGGTTACCTCAATATT	NA	False	NA	18	True	AATAAA	-28	NA	29825439	29849442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29825611_29826021_29826250_29828506_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
m54284U_201201_044215/60228738/ccs	chr6	-	3408	11	NNC	ENSMUSG00000029790.17	novel	3447	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	26.0624250598443	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTTTGCTATTAATG	NA	False	NA	0	True	ATTAAA	-16	NA	30693748	30653455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_30655850_30656477_30656694_30657335_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
m54284U_201201_044215/60293473/ccs	chr15	+	3715	20	NNC	ENSMUSG00000037646.11	novel	4568	29	NA	NA	0	-72469	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_19	14.5875900659951	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTCATTTGTCTTCTGA	166	False	NA	NA	False	AATAAA	-12	NA	35371711	35570629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35569975
m54284U_201201_044215/60295079/ccs	chr1	-	592	5	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1956	6208	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	39.6169155790806	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACCCTTCTTAATTTCG	NA	False	NA	0	True	AATAAA	-18	NA	132206193	132196245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_132196405_132196619_132196718_132202453_132202560_132202761_132202875_132206077
m54284U_201201_044215/60295169/ccs	chr5	-	3552	10	NIC	ENSMUSG00000029246.15	novel	3981	11	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	187.556477090943	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATGTGTGCATTTTAA	NA	False	NA	49	True	AATAAA	-3	NA	77099063	77061122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77098803
m54284U_201201_044215/6030752/ccs	chr8	+	3435	18	NIC	ENSMUSG00000031446.15	novel	3728	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	84.9753475343368	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTTTACTAATACATTGG	NA	False	NA	26	True	AATAAA	-23	NA	13155739	13197940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13155904_13156193_13156310_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
m54284U_201201_044215/6030823/ccs	chr14	+	1734	14	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-631	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	461.412777759015	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTCTTGTCTTTTCTAA	NA	False	NA	31	True	AATAAA	-23	NA	45567284	45586531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_45567561_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
m54284U_201201_044215/6030979/ccs	chr7	-	197	1	Intergenic	novelGene_3795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAAAGAAAACTC	NA	False	NA	NA	False	NA	NA	NA	35418788	35418591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_35418600_35418800
m54284U_201201_044215/6031399/ccs	chr10	-	4191	24	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_23	99.8087964119888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628065	62579706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
m54284U_201201_044215/60359508/ccs	chr7	+	1267	5	NIC	ENSMUSG00000030946.14	novel	1612	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	131.685942681822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTGACTCAGCCTTTC	NA	False	NA	9	True	AATAAA	-17	NA	132212367	132308146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_132212560_132243252_132243317_132244215_132244309_132251986_132252079_132307320
m54284U_201201_044215/60359743/ccs	chr18	-	1853	4	NNC	ENSMUSG00000024619.9	novel	1750	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	439.390486924785	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGCCATCCTTTCTCGT	7754	False	NA	-5	True	ATTAAA	-22	NA	61169271	61151933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_61153014_61153445_61153592_61157113_61157217_61168747
m54284U_201201_044215/60360805/ccs	chr4	-	2009	3	NNC	ENSMUSG00000028840.11	novel	1994	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_2	330.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAGTGTGCATGTAT	7668	False	NA	-11	True	NA	NA	NA	133972903	133970617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_133972242_133972335_133972399_133972581
m54284U_201201_044215/60425909/ccs	chr5	-	4310	26	Fusion	ENSMUSG00000107283.4_ENSMUSG00000106864.4	novel	2328	9	NA	NA	0	0	multi-exon	FALSE	canonical	2	5	junction_8	162.264406448241	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAATTGTGTCTTTA	NA	False	NA	NA	False	TTTAAA	-4	NA	31337255	31298006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534_31311635_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
m54284U_201201_044215/60557951/ccs	chr19	+	3757	12	NIC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999496068721	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738769	5752893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_5738859_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
m54284U_201201_044215/60621770/ccs	chr11	-	8160	39	NIC	ENSMUSG00000018800.15	novel	8231	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	4.51559317448456	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGACTTCAGTTTGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	110228542	110160194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228419
m54284U_201201_044215/60686342/ccs	chr2	+	4665	15	NIC	ENSMUSG00000005506.17	novel	7806	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	246.537336245984	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
m54284U_201201_044215/60687218/ccs	chr3	+	1877	3	NIC	ENSMUSG00000037661.15	novel	1689	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	19	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910098	30951341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_30910395_30931383_30931482_30949858
m54284U_201201_044215/60688860/ccs	chr11	-	4001	16	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_12	136.396383138752	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5020	False	NA	-12	True	AATAAA	-12	NA	120042148	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029919_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201201_044215/60689226/ccs	chr2	+	3583	7	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1115	junction_3	92.2129178706661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8569	False	NA	NA	False	AATAAA	-16	NA	72306502	72317237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72314361_72314942_72315093_72315519_72315657_72316063
m54284U_201201_044215/60751908/ccs	chr15	+	186	1	Intergenic	novelGene_7914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTAAACTGTTCTTGGA	NA	False	NA	NA	False	NA	NA	NA	95018020	95018206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_95018000_95018200
m54284U_201201_044215/60751997/ccs	chr7	-	4546	14	NIC	ENSMUSG00000040725.14	novel	3784	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	866	junction_13	89.5978523622581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGGAGTCGTGGTAGTT	9542	False	NA	NA	False	NA	NA	NA	25454182	25420906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_25421789_25422230_25422423_25423979_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
m54284U_201201_044215/60752254/ccs	chr11	-	5046	1	Intergenic	novelGene_5821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCTTACTGCTGACAGC	6284	False	NA	NA	False	NA	NA	NA	52258711	52253665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_52253700_52258700
m54284U_201201_044215/60753455/ccs	chr15	-	180	1	Intergenic	novelGene_7877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTAGGAGAAAAAAATA	4446	False	NA	NA	False	NA	NA	NA	84127624	84127444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_84127400_84127600
m54284U_201201_044215/60754576/ccs	chr17	+	179	1	Antisense	novelGene_ENSMUSG00000116657.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAATTTTAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	27764513	27764692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_27764500_27764700
m54284U_201201_044215/60818696/ccs	chr12	-	3483	13	NIC	ENSMUSG00000020664.11	novel	2544	14	NA	NA	0	-287	intron_retention	FALSE	canonical	3	710	junction_4	68.8250600354906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACTGGTTATTCTGAG	NA	False	NA	-12	True	AATAAA	-16	NA	31401413	31381562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
m54284U_201201_044215/60819874/ccs	chr6	-	208	1	Intergenic	novelGene_3238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTTATCAAAGTACT	1991	False	NA	NA	False	NA	NA	NA	40611115	40610907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_40610900_40611100
m54284U_201201_044215/60883207/ccs	chr11	-	2860	4	NIC	ENSMUSG00000020946.14	novel	917	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	169.969278269797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	False	NA	2	True	AATAAA	-31	NA	103588524	103567674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_103570224_103577407_103577541_103578350_103578460_103588455
m54284U_201201_044215/60883605/ccs	chr1	+	4117	24	NNC	ENSMUSG00000026083.13	novel	7797	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	142.449221543456	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTTCTACAGATTTTG	1408	False	NA	37	True	ATTAAA	-24	NA	38037209	38091102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075076_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
m54284U_201201_044215/60884250/ccs	chr12	+	3142	7	NIC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	-600	intron_retention	FALSE	canonical	3	28	junction_2	73.0032343271325	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120040	113129068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_113120192_113120294_113120374_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
m54284U_201201_044215/60885005/ccs	chrX	+	1919	12	NIC	ENSMUSG00000031353.14	novel	705	6	NA	NA	-219	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	883.766348464166	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	NA	False	NA	-32	True	NA	NA	NA	161543842	161561752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_161544160_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
m54284U_201201_044215/60885277/ccs	chr18	+	4773	10	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	768	junction_6	37.7038492320556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13105328	13126007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13122937_13123549
m54284U_201201_044215/60885650/ccs	chr6	+	2248	10	NNC	ENSMUSG00000030062.8	novel	3633	10	NA	NA	0	568	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_7	748.807496401222	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACATTTGCTTTTGCTGT	537	False	NA	5	True	AATAAA	-11	NA	88061463	88080937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077879_88077964_88078956_88079203_88080346
m54284U_201201_044215/60948956/ccs	chr17	-	4230	33	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_16	56.7851969596831	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035586	80887945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925985_80926025_80931484_80931544_80936714_80936778_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
m54284U_201201_044215/60948980/ccs	chr11	-	3696	11	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_3	166.15787673174	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_100240446_100242035_100242128_100242243_100242382_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201201_044215/60949717/ccs	chr4	-	2496	13	NIC	ENSMUSG00000028800.16	novel	2038	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	1463	junction_9	210.524526810747	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGGTTGGTTTAAGTT	8808	False	NA	-5	True	AATAAA	-22	NA	129436506	129409896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
m54284U_201201_044215/6095405/ccs	chr13	+	4163	10	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	175.481418945317	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCAGCTGTGGGTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	54769616	54811876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
m54284U_201201_044215/6097687/ccs	chr11	-	1272	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_6	6146.61064001942	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110342_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
m54284U_201201_044215/61014107/ccs	chr16	+	1819	8	NIC	ENSMUSG00000014303.14	novel	3619	7	NA	NA	0	219	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	45.2088125777915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATGTTAAAATCGCTA	NA	False	NA	NA	False	AATAAA	-16	NA	4412576	4443007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4439472_4439571_4442333
m54284U_201201_044215/61079601/ccs	chr10	+	2750	12	NIC	ENSMUSG00000006498.17	novel	3169	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_1	511.356921168029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1561	False	NA	31	True	ATTAAA	-15	NA	79690438	79700193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79690556_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
m54284U_201201_044215/61079801/ccs	chr11	-	390	1	Intergenic	novelGene_6109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	80177408	80177018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80177000_80177400
m54284U_201201_044215/61145519/ccs	chr11	-	2641	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_6	116.342425623674	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
m54284U_201201_044215/61211401/ccs	chr6	-	2077	2	Antisense	novelGene_ENSMUSG00000081126.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTCTGGATAGTCTTC	NA	False	NA	NA	False	NA	NA	NA	149264144	149262012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_149263378_149263432
m54284U_201201_044215/61276968/ccs	chr6	+	7731	16	NIC	ENSMUSG00000005893.15	novel	7647	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	9.13503633757901	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGTGTGCTGCTCATCT	NA	False	NA	13	True	ATTAAA	-15	NA	92068370	92150038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_92068724_92082262_92082347_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
m54284U_201201_044215/61278816/ccs	chr8	+	4793	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	140	junction_1	62.568282144834	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763543	85784212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
m54284U_201201_044215/61341802/ccs	chr8	-	971	4	NNC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	73.9113583212275	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTGCAAGCTATTTTC	7520	False	NA	-9	True	AATAAA	-22	NA	84738800	84736850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_84737122_84737339_84737402_84737769_84738350_84738742
m54284U_201201_044215/61342748/ccs	chr4	+	4014	12	NIC	ENSMUSG00000028811.13	novel	2909	13	NA	NA	0	-371	intron_retention	FALSE	canonical	3	1466	junction_8	130.155469654532	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCACGGAGTCTCGTG	855	False	NA	25	True	AATAAA	-15	NA	129083694	129113029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
m54284U_201201_044215/61407336/ccs	chrX	-	177	1	Intergenic	novelGene_9568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAGTAAGACAGTT	NA	False	NA	NA	False	NA	NA	NA	100964691	100964514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_100964500_100964700
m54284U_201201_044215/61409311/ccs	chr6	-	1166	7	NIC	ENSMUSG00000030246.13	novel	1304	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	308.522104376476	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTGCCTTTTTCTC	NA	False	NA	-4	True	AATAAA	-19	NA	142453669	142435974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_142436331_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
m54284U_201201_044215/61473726/ccs	chr16	-	1887	2	Antisense	novelGene_ENSMUSG00000052917.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	133	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAATATGCATATAATGT	4072	False	NA	NA	False	AATAAA	-19	NA	55936661	55932445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_55934262_55936590
m54284U_201201_044215/61475246/ccs	chr3	-	1663	5	NIC	ENSMUSG00000039519.7	novel	2166	6	NA	NA	0	-327	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	6.28490254498827	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATGTCATGGCAATCA	NA	False	NA	NA	False	AATAAA	-16	NA	18297502	18126440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_18126918_18150686_18150894_18151367_18151959_18157864_18158002_18297251
m54284U_201201_044215/61475594/ccs	chr5	-	3367	16	NIC	ENSMUSG00000042508.17	novel	3453	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	63.215469274186	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211737	9168867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9200375_9200493_9201797_9201919_9211613
m54284U_201201_044215/61606734/ccs	chr5	-	2762	12	NNC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	155.880543371047	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8828	False	NA	-1	True	AATAAA	-28	NA	43939492	43901957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_43902718_43908203_43908353_43915563_43915754_43915849_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
m54284U_201201_044215/6161873/ccs	chr9	-	453	4	NIC	ENSMUSG00000038412.9	novel	605	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	216	junction_3	942.112637757409	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACGGTATTGAATATTG	NA	False	NA	-25	True	AATAAA	-20	NA	121686628	121678603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_121678756_121679253_121679389_121681556_121681672_121686577
m54284U_201201_044215/61669495/ccs	chr7	-	191	1	Intergenic	novelGene_4157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	140615808	140615617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_140615600_140615800
m54284U_201201_044215/61669714/ccs	chr11	-	4666	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-229	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	6.15250402560811	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCTGCAATTTATT	9663	False	NA	-3	True	AATAAA	-21	NA	22237024	21955827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006529_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
m54284U_201201_044215/61670441/ccs	chr17	-	1130	4	ISM	ENSMUSG00000038045.15	ENSMUST00000146474.8	764	5	0	0	0	0	intron_retention	FALSE	canonical	3	141	junction_3	32.273139846559	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTGGAACATTGCTG	NA	False	NA	-16	True	ATTAAA	-16	NA	79202529	79192325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_79192646_79196359_79196517_79198274_79198370_79201971
m54284U_201201_044215/61734958/ccs	chr13	-	168	1	Intergenic	novelGene_7192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAAGTCCGGTTTTCG	NA	False	NA	NA	False	NA	NA	NA	67946745	67946577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_67946600_67946700
m54284U_201201_044215/61736551/ccs	chr3	-	5841	11	NIC	ENSMUSG00000027829.16	novel	2229	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_8	37.3739213891184	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865620	65853571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65862698_65864273_65864384_65864921_65864997_65865228
m54284U_201201_044215/61737674/ccs	chr6	+	2219	17	NIC	ENSMUSG00000029802.14	novel	2178	16	NA	NA	0	-60	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	58.2246457696395	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTGTTCTTTTCTTCAC	NA	False	NA	16	True	ATTAAA	-23	NA	58617530	58669436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_58617613_58627445_58627529_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
m54284U_201201_044215/61802334/ccs	chr11	-	3885	26	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	0	0	intron_retention	FALSE	canonical	1	50	junction_24	48.6998973304873	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120992	102086572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
m54284U_201201_044215/61868440/ccs	chr15	+	5199	19	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_1	174.888897712833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	95	False	NA	16	True	AATAAA	-17	NA	25780111	25813759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_25780175_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
m54284U_201201_044215/61934257/ccs	chr5	+	3100	15	NIC	ENSMUSG00000054256.12	novel	3133	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_12	16.062378404209	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	2389	False	NA	15	True	AATAAA	-15	NA	115567657	115593757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_115567866_115568035_115568077_115568681_115568764_115568862_115568948_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
m54284U_201201_044215/61997399/ccs	chr5	+	225	1	Intergenic	novelGene_2704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAATAATATGTGGTC	NA	False	NA	NA	False	NA	NA	NA	103482565	103482790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_103482600_103482800
m54284U_201201_044215/62063523/ccs	chr7	-	3358	20	NIC	ENSMUSG00000030766.16	novel	3311	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	48.7393428936662	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGCTAATTCTTAGA	NA	False	NA	-5	True	ATTAAA	-21	NA	122969126	122878497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_122879340_122882999_122883049_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
m54284U_201201_044215/62063614/ccs	chr9	+	3729	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	-99	3519	-83	-1967	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTGAGAGAATGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	111100913	111104642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_111100900_111104600
m54284U_201201_044215/62064633/ccs	chrX	+	3618	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	0	-449	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_24	675.61006031586	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAAGTATGTCTA	NA	False	NA	72	True	AATAAA	-41	NA	20529136	20548969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548351_20548449_20548616
m54284U_201201_044215/62065293/ccs	chr11	+	2734	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_15	242.828972807205	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455259	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473788_115473855_115474151_115474254_115474546
m54284U_201201_044215/62128437/ccs	chr9	-	3440	24	NIC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_17	70.6780554601603	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61840510_61840553_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
m54284U_201201_044215/62129785/ccs	chr12	-	2640	14	NNC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	97.3818811136382	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGCTTTCTGGTGTGG	NA	False	NA	0	True	AATAAA	-19	NA	112640710	112620254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_112621162_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
m54284U_201201_044215/62129939/ccs	chr11	-	1498	9	NNC	ENSMUSG00000053654.8	novel	1542	8	NA	NA	-1449	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_8	27.8632262130572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAATTCATCATTTGT	NA	False	NA	-11	True	AATAAA	-18	NA	100162146	100153712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_100153994_100154119_100154170_100155303_100155525_100155754_100155881_100156425_100156588_100157760_100157918_100158025_100158109_100160235_100160370_100161862
m54284U_201201_044215/62130927/ccs	chr15	-	1488	5	ISM	ENSMUSG00000022420.17	ENSMUST00000162713.9	1357	7	2556	-684	0	0	3prime_fragment	FALSE	canonical	3	63	junction_3	39.8591269347436	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTGTGGTGTATTGA	294	False	NA	NA	False	ATTAAA	-17	NA	79658617	79645653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_79646727_79647710_79647795_79649016_79649223_79649987_79650055_79658559
m54284U_201201_044215/62193851/ccs	chr11	-	1495	11	NNC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	880.90807692971	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAACCTTGTTCACTT	9585	False	NA	-6	True	AATAAA	-17	NA	5828212	5822187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823504_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
m54284U_201201_044215/62193909/ccs	chr15	+	232	1	Intergenic	novelGene_7649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACAACCAAAAAGAAAAACA	NA	False	NA	NA	False	NA	NA	NA	19376330	19376562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_19376300_19376600
m54284U_201201_044215/62194294/ccs	chr9	+	3073	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	291.600903178803	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAGGGTCCAAGAATC	NA	False	NA	40	True	AATAAA	-42	NA	21458218	21500783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
m54284U_201201_044215/62196325/ccs	chr18	+	4297	14	NIC	ENSMUSG00000054321.8	novel	5134	15	NA	NA	0	-714	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	28.1548969959414	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTTTGCAGCAGTT	NA	False	NA	16	True	ATTAAA	-22	NA	14916301	15032702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
m54284U_201201_044215/62196393/ccs	chr2	+	2345	12	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	433	junction_11	590.287953263994	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332
m54284U_201201_044215/62261061/ccs	chr1	+	4076	14	NIC	ENSMUSG00000023150.15	novel	3315	15	NA	NA	0	-159	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	463.036798670556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220328	151240007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231988_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
m54284U_201201_044215/62261815/ccs	chr10	-	2632	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	308.377436915569	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269481	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
m54284U_201201_044215/62327082/ccs	chr8	-	3869	18	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	216	junction_12	35.9747123796125	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495384	70471216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
m54284U_201201_044215/62456564/ccs	chr2	+	8561	36	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1316	0	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_1	138.821029989505	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51961527	52012395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201201_044215/62457480/ccs	chr2	-	2021	10	ISM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	28915	0	28915	0	3prime_fragment	FALSE	canonical	3	8	junction_9	4.13058451009802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGACTCTGTGTGTCCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	91825932	91812672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601
m54284U_201201_044215/62458350/ccs	chr2	+	190	1	Intergenic	novelGene_1288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	172322849	172323039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_172322800_172323000
m54284U_201201_044215/62523514/ccs	chr9	-	187	1	Intergenic	novelGene_5062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAATAAATAAATAAATAAA	1820	False	NA	NA	False	NA	NA	NA	106078497	106078310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_106078300_106078500
m54284U_201201_044215/62586957/ccs	chr14	-	4560	27	NIC	ENSMUSG00000022021.15	novel	4582	28	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	54.2548773473531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACGTATGTCTCTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	87378671	86892802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87378433
m54284U_201201_044215/62587352/ccs	chr1	-	6483	41	NIC	ENSMUSG00000026219.15	novel	6442	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_25	242.994257905408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
m54284U_201201_044215/62588421/ccs	chr15	+	2005	12	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	977	junction_4	61.6799256090707	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832719	80853320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
m54284U_201201_044215/62589741/ccs	chr15	-	4631	16	NNC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_15	74.6837480461594	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597611	96585272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597317
m54284U_201201_044215/62653497/ccs	chrX	-	1382	4	NIC	ENSMUSG00000031118.9	novel	1454	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_2	10.4029910228848	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGTTGCTCCGTTTCA	NA	False	NA	-2	True	CATAAA	-17	NA	51061649	51057571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_51058747_51059091_51059163_51059858_51059953_51061607
m54284U_201201_044215/62719680/ccs	chr16	-	5172	25	NIC	ENSMUSG00000022822.17	novel	5811	30	NA	NA	211	0	intron_retention	FALSE	canonical	3	67	junction_20	90.2200627478291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGTTGTATAAAACAG	NA	False	NA	-3	True	AATAAA	-20	NA	20218825	20150052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211673_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555
m54284U_201201_044215/62783996/ccs	chr3	+	154	1	Intergenic	novelGene_1541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	90350351	90350505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_90350400_90350500
m54284U_201201_044215/62849629/ccs	chr1	+	3717	9	NIC	ENSMUSG00000026305.16	novel	3645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_5	16.4088390814219	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	4	True	AATAAA	-18	NA	90981175	91045037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
m54284U_201201_044215/62850613/ccs	chr13	+	3541	23	NIC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	0	-2132	intron_retention	FALSE	canonical	3	86	junction_19	66.2512279630466	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCCTTTCAGTGGAAT	NA	False	NA	17	True	AATAAA	-26	NA	55782839	55826937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
m54284U_201201_044215/62915567/ccs	chr11	+	201	1	Intergenic	novelGene_5988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAATAAACTGCCA	NA	False	NA	NA	False	NA	NA	NA	74600698	74600899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74600700_74600900
m54284U_201201_044215/6291714/ccs	chr2	+	2341	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	75	junction_10	829.807644742278	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120079_130120211_130120332
m54284U_201201_044215/6291989/ccs	chr4	-	139	1	Intergenic	novelGene_2221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAATAATAATAATAATAA	NA	False	NA	NA	False	NA	NA	NA	133512387	133512248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_133512200_133512400
m54284U_201201_044215/6292015/ccs	chr9	+	2384	2	NNC	ENSMUSG00000035274.14	novel	409	2	NA	NA	0	-1049	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTTGTGTTTAACTTTG	NA	False	NA	3	True	AATAAA	-16	NA	85725413	85728044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_85725457_85725703
m54284U_201201_044215/6292034/ccs	chr9	+	1776	13	NIC	ENSMUSG00000025232.9	novel	1996	14	NA	NA	154	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	352.088609427924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTGGGTTGCTTGTGT	NA	False	NA	32	True	AATAAA	-24	NA	59446976	59472392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59447260_59461415_59461509_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
m54284U_201201_044215/62980718/ccs	chr8	+	2174	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	-52	combination_of_known_splicesites	FALSE	canonical	3	26	junction_10	169.031755522446	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTTCATTGTGTCTTT	NA	False	NA	17	True	AATAAA	-19	NA	13807676	13831886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
m54284U_201201_044215/63048067/ccs	chr7	-	1537	10	NIC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	2113	junction_4	111.139329750021	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27741346_27741525_27741582_27741763_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
m54284U_201201_044215/63111463/ccs	chr15	-	183	1	Intergenic	novelGene_7884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAATATAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	84787142	84786959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_84787000_84787100
m54284U_201201_044215/63176944/ccs	chr15	-	5551	37	NNC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_26	92.1565152469924	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941633	75919006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936674_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
m54284U_201201_044215/63177260/ccs	chr13	-	2093	17	ISM	ENSMUSG00000021546.19	ENSMUST00000116403.9	2970	18	827	808	0	0	3prime_fragment	FALSE	canonical	3	15	junction_16	2242.05790566251	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877_58549932_58550206
m54284U_201201_044215/63177303/ccs	chr2	-	2119	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	19.790149064623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	0	True	AATAAA	-20	NA	59712935	59682707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708932_59712744
m54284U_201201_044215/63242421/ccs	chrX	-	188	1	Intergenic	novelGene_9383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTTTGACTGAAGCAG	NA	False	NA	NA	False	NA	NA	NA	12421898	12421710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_12421700_12421900
m54284U_201201_044215/63242744/ccs	chr19	-	2874	23	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-101	-154	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_22	237.328367735994	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340111	37247982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339916
m54284U_201201_044215/63242925/ccs	chr9	+	4015	1	Intergenic	novelGene_4825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAAAATTAT	NA	False	NA	NA	False	NA	NA	NA	59384781	59388796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59384800_59388800
m54284U_201201_044215/63243623/ccs	chrX	-	2050	10	NNC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	0	-801	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	16.9538225414044	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253144	36179484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
m54284U_201201_044215/63245043/ccs	chr12	+	1657	4	NNC	ENSMUSG00000040877.17	novel	2657	7	NA	NA	-5171	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	28.3313724811677	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	108981556	108994378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_108981695_108990888_108991060_108992335_108992477_108993171
m54284U_201201_044215/63308458/ccs	chr4	-	1527	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-273	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_7	625.276037002042	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGACTATTTTGAC	NA	False	NA	-33	True	TATAAA	-18	NA	155170828	155158839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167772_155170661
m54284U_201201_044215/63375483/ccs	chr11	-	4059	16	NNC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_2	132.618986406757	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_119996863_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201201_044215/63375496/ccs	chr11	+	2815	18	NNC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	intron_retention	FALSE	canonical	2	42	junction_10	242.792761958662	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455259	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469620_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
m54284U_201201_044215/63375987/ccschrUn	chrUn_JH584304v1	-	2157	10	Intergenic	novelGene_9754	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_9	330.146806103356	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	61455	52188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_56985_57152_57410_57500_58563_58836_59591_59774_61381
m54284U_201201_044215/63439629/ccs	chr5	+	204	2	Antisense	novelGene_ENSMUSG00000029545.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1010	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGGCTCAGTATCT	6291	False	NA	NA	False	AAAACA	-5	NA	115244336	115258139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_115244387_115257985
m54284U_201201_044215/63441581/ccs	chr4	+	1760	4	NIC	ENSMUSG00000039693.12	novel	1597	3	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	134.127634073752	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTACACTGTGTATGT	14	True	NA	14	True	NA	NA	NA	48540410	48561918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_48540569_48549921_48549998_48552379_48552831_48560843
m54284U_201201_044215/63505676/ccs	chr3	+	2589	2	NIC	ENSMUSG00000027550.15	novel	1518	10	NA	NA	0	-14737	intron_retention	FALSE	canonical	3	64	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-30	NA	14598938	14601796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_14601265_14601533
m54284U_201201_044215/63572549/ccs	chr11	+	2067	10	NIC	ENSMUSG00000017421.19	novel	2311	11	NA	NA	0	-99	intron_retention	FALSE	canonical	3	18	junction_5	315.175357813455	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTTTATTCATAACCC	NA	False	NA	28	True	AATAAA	-17	NA	80274156	80286972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
m54284U_201201_044215/6357534/ccs	chr11	-	3917	15	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_14	175.158543343231	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5020	False	NA	-12	True	AATAAA	-12	NA	120042148	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_119996863_119997259_119997434_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
m54284U_201201_044215/6357861/ccs	chr5	-	3230	11	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	46.2520269826091	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAGAAAAAAATGGAAACTA	NA	False	NA	NA	False	AATAAA	-16	NA	104059125	104009945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104038580_104038648_104058981
m54284U_201201_044215/63635510/ccs	chr6	+	195	1	Intergenic	novelGene_3298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTGGCTTAAAGCAAAATA	NA	False	NA	42	True	NA	NA	NA	64977843	64978038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_64977800_64978000
m54284U_201201_044215/63638169/ccs	chr11	-	3255	1	Antisense	novelGene_ENSMUSG00000025142.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAACAAACAAAAAACCAG	1550	False	NA	NA	False	NA	NA	NA	120596966	120593711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_120593700_120597000
m54284U_201201_044215/63702936/ccs	chr8	-	1612	4	NNC	ENSMUSG00000033106.7	novel	1246	5	NA	NA	0	271	intron_retention	FALSE	canonical	3	16	junction_2	53.0471488394994	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAAGCAAGCAGTTCT	NA	False	NA	-10	True	AATAAA	-14	NA	106937565	106927077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_106927782_106928862_106928992_106930962_106931173_106936996
m54284U_201201_044215/63767134/ccs	chr6	-	4081	8	NIC	ENSMUSG00000030101.16	novel	2593	9	NA	NA	0	-209	intron_retention	FALSE	canonical	3	77	junction_4	16.1510724986653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATAGTCTGAGTCTCA	2498	False	NA	-19	True	NA	NA	NA	108162517	108084197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108132003_108150316_108150392_108152948_108153123_108162253
m54284U_201201_044215/63768959/ccs	chr14	+	2240	13	NIC	ENSMUSG00000039599.17	novel	2370	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	86.9643924578074	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTATTACATTTTAGA	NA	False	NA	11	True	AATAAA	-20	NA	20398257	20433559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
m54284U_201201_044215/63832424/ccs	chr5	-	163	1	Intergenic	novelGene_2702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAAATTACTGA	NA	False	NA	NA	False	NA	NA	NA	102233895	102233732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_102233700_102233900
m54284U_201201_044215/63833515/ccs	chr11	-	2938	20	NIC	ENSMUSG00000020706.14	novel	3144	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	632	junction_6	78.119909252422	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTTCTGATAGTTTA	NA	False	NA	-14	True	AATAAA	-13	NA	106146630	106139967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
m54284U_201201_044215/63834642/ccs	chr8	-	190	1	ISM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	44429	192	44361	-192	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGGACTGGAAA	NA	False	NA	NA	False	NA	NA	NA	106440867	106440677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_106440700_106440900
m54284U_201201_044215/63897899/ccs	chr11	-	4675	23	NNC	ENSMUSG00000042302.15	novel	4971	25	NA	NA	-229	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	6.6296666084233	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCTGCAATTTATT	9663	False	NA	-3	True	AATAAA	-21	NA	22237024	21955827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096626_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
m54284U_201201_044215/63963393/ccs	chr8	+	1915	8	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	299.186720757374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343478	61360614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61359473_61360370
m54284U_201201_044215/63963525/ccs	chr1	-	2652	16	NIC	ENSMUSG00000026709.11	novel	3619	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	101.925768195399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTATTTAGAGTCTTCC	NA	False	NA	-16	True	AATGAA	-26	NA	160898228	160869074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
m54284U_201201_044215/63964912/ccs	chr19	-	2004	5	NIC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	309	junction_2	11.4345966260293	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGGGCTATCATT	NA	False	NA	NA	False	AATAAA	-21	NA	7360359	7335050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7352216_7360036
m54284U_201201_044215/64031428/ccs	chr7	+	2218	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	340.047415661344	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43896233_43896674_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201201_044215/64095768/ccs	chr15	-	2101	8	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	16287	junction_7	5328.95118141249	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79962096_79962187_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965985_79966590_79966784_79967524
m54284U_201201_044215/64096571/ccs	chr8	+	3325	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2092	combination_of_known_junctions	FALSE	canonical	2	137	junction_1	723.09724622626	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760547	111782204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111760577_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
m54284U_201201_044215/64096640/ccs	chr16	+	1941	5	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	265	junction_3	5.35607132140714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094172	17096525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_17094333_17094497_17095115_17095205_17095457_17095532_17095756_17095835
m54284U_201201_044215/64159993/ccs	chr19	+	172	1	Intergenic	novelGene_9241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTAAAGGCACTT	8304	False	NA	NA	False	NA	NA	NA	38141106	38141278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_38141100_38141300
m54284U_201201_044215/64161892/ccs	chr15	+	5829	23	NIC	ENSMUSG00000022272.18	novel	748	4	NA	NA	249	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	157.493040643832	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	333	False	NA	16	True	AATAAA	-17	NA	25759119	25813759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_25759238_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
m54284U_201201_044215/64162205/ccs	chr2	+	159	1	Intergenic	novelGene_588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAAAAATTCT	2849	False	NA	NA	False	NA	NA	NA	9909136	9909295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_9909100_9909300
m54284U_201201_044215/64162226/ccs	chr12	+	2749	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	75.8209074068624	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807618	117842441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
m54284U_201201_044215/64226368/ccs	chr15	-	5645	31	NIC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	3570	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	231.373485948585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTGAAGAAACAGTTTT	3494	False	NA	NA	False	AATAAA	-21	NA	38006178	37967571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004785_38004933_38006111
m54284U_201201_044215/64226393/ccs	chr2	+	6300	16	NNC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	-11372	0	intron_retention	FALSE	canonical	3	14	junction_1	70.1929404490857	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	4414	False	NA	11	True	ATTAAA	-21	NA	35500620	35621006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_35500706_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
m54284U_201201_044215/64227068/ccs	chr8	+	2621	17	NIC	ENSMUSG00000031979.18	novel	2825	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_11	58.0769963066273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAGTTATGTATCCAG	NA	False	NA	29	True	AATAAA	-19	NA	125247557	125278747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
m54284U_201201_044215/64228005/ccs	chr8	-	2365	6	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	140	junction_2	605.221281846566	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375086	4338342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_4339925_4345335_4345472_4351684_4351839_4354926_4355031_4361598_4361787_4374885
m54284U_201201_044215/6423517/ccs	chr11	-	2819	18	ISM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	-28	7192	0	-5139	5prime_fragment	FALSE	canonical	3	29	junction_7	6.30482870916436	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGACTTCAGTGTGCCC	3321	False	NA	NA	False	AATAAA	-16	NA	116303858	116234370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
m54284U_201201_044215/64291682/ccs	chr2	-	4349	21	NIC	ENSMUSG00000041997.17	novel	4271	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_18	66.7850844126142	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656072	70542750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70599205_70599275_70600347_70600420_70617220_70617340_70655536
m54284U_201201_044215/64292410/ccs	chr3	-	209	1	Intergenic	novelGene_1704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGGGCCAAGGAAGTGC	NA	False	NA	NA	False	NA	NA	NA	138460826	138460617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_138460600_138460800
m54284U_201201_044215/64356903/ccs	chr5	-	1528	6	NNC	ENSMUSG00000029507.17	novel	1563	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_5	205.782020594609	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGCCTATTTTCCTT	NA	False	NA	0	True	ATTAAA	-21	NA	110928525	110921533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928453
m54284U_201201_044215/64357994/ccs	chr11	-	171	1	Intergenic	novelGene_6188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATGTACATAAAA	NA	False	NA	NA	False	NA	NA	NA	88108601	88108430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88108400_88108600
m54284U_201201_044215/64422858/ccs	chr4	-	2220	7	NIC	ENSMUSG00000041459.16	novel	1904	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_1	394.331255277703	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTTGTTTTGCAGCC	NA	False	NA	NA	False	AATAAA	-17	NA	148711222	148701319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_148701501_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
m54284U_201201_044215/64423246/ccs	chr12	-	461	1	FSM	ENSMUSG00000079036.11	ENSMUST00000185301.2	408	1	85	-138	0	138	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	87490603	87490142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_87490100_87490600
m54284U_201201_044215/64488482/ccs	chr11	+	3737	11	NNC	ENSMUSG00000017421.19	novel	2245	11	NA	NA	0	-99	intron_retention	FALSE	canonical	3	28	junction_2	290.76595399049	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTTTATTCATAACCC	NA	False	NA	28	True	AATAAA	-17	NA	80274156	80286972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_80274322_80276728_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
m54284U_201201_044215/64490077/ccs	chr3	-	200	1	Intergenic	novelGene_1565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAATACTTAAAAGATA	NA	False	NA	NA	False	NA	NA	NA	95120651	95120451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_95120500_95120700
m54284U_201201_044215/64554149/ccs	chr1	-	6872	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	0	441	combination_of_known_splicesites	FALSE	canonical	3	25	junction_14	39.454766143377	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30913002	30842185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30912658
m54284U_201201_044215/64554261/ccs	chr1	+	672	3	Intergenic	novelGene_305	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAACATTCTTTAGAA	NA	False	NA	NA	False	AATAAA	-15	NA	131807807	131812554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_131807860_131811662_131811895_131812166
m54284U_201201_044215/64621126/ccs	chr11	+	3077	6	NIC	ENSMUSG00000042377.9	novel	4778	5	NA	NA	0	-1745	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.9293765408777	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGCCCACAGTGTCCT	NA	False	NA	NA	False	ATTAAA	-13	NA	61574916	61599032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_61574995_61575278_61575882_61585935_61586104_61592468_61592594_61593282_61594544_61598190
m54284U_201201_044215/64684488/ccs	chr7	-	3550	3	Fusion	ENSMUSG00000092335.2_ENSMUSG00000108446.2	novel	1425	4	NA	NA	0	2252	multi-exon	FALSE	canonical	3	30	junction_2	106	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTTTTCTTATCT	NA	False	NA	-2	True	AGTAAA	-24	NA	42241971	42226954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_-_42230333_42232070_42232132_42241860
m54284U_201201_044215/64684728/ccs	chr2	+	1918	9	NNC	ENSMUSG00000017999.17	novel	2151	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_8	237.315191254163	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATAGTATTATTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	166857229	166867733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166866710
m54284U_201201_044215/64749613/ccs	chr4	-	158	1	Intergenic	novelGene_2235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAAACTCAGGAGGAG	NA	False	NA	NA	False	NA	NA	NA	134498415	134498257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_134498300_134498400
m54284U_201201_044215/64750625/ccs	chr18	+	4934	20	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	0	51	intron_retention	FALSE	canonical	3	254	junction_5	113.495823443236	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644563	42708670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
m54284U_201201_044215/64750944/ccs	chr17	+	913	4	NIC	ENSMUSG00000034377.11	novel	3147	2	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	6.34209919681348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTGAGTTTTCCTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	6157132	6175110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_6157272_6172102_6172620_6174445_6174524_6174931
m54284U_201201_044215/64751491/ccs	chr2	-	171	1	Intergenic	novelGene_1333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAGATTAATAGT	6491	False	NA	NA	False	NA	NA	NA	181307822	181307651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181307700_181307800
m54284U_201201_044215/64751766/ccs	chr13	-	188	1	Intergenic	novelGene_7318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGTAGAGAGGAGAGCC	NA	False	NA	NA	False	NA	NA	NA	114209152	114208964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_114209000_114209200
m54284U_201201_044215/6488161/ccs	chr4	-	3814	10	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_9	35.3490531069158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	-7	True	NA	-7	True	AATAAA	-21	NA	43025819	43017634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
m54284U_201201_044215/64881747/ccs	chr10	+	3610	24	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	46.8391044035137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9115	False	NA	29	True	AATAAA	-18	NA	41352331	41363026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
m54284U_201201_044215/6490574/ccs	chr4	-	3654	19	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_16	79.9818073450009	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
m54284U_201201_044215/64948092/ccs	chr2	-	3034	15	NIC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-228	0	intron_retention	FALSE	canonical	1	2	junction_14	23.4539279161056	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCAGGCCTGCTTTATTT	NA	False	NA	-1	True	AATAAA	-22	NA	93699730	93685706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93698783
m54284U_201201_044215/65013632/ccs	chr7	+	2299	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	226.026789064925	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748707_4748938_4749075_4749261_4749375
m54284U_201201_044215/65078869/ccs	chr2	+	4022	5	NIC	ENSMUSG00000078864.11	novel	744	6	NA	NA	0	2805	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	122.051218756717	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	177401080	177415070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_177401169_177404638_177404694_177409836_177409964_177410168_177410230_177411379
m54284U_201201_044215/65143333/ccs	chr10	-	1587	10	NIC	ENSMUSG00000019948.5	novel	1705	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_9	88.0716599363871	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCTGTTTAATGTTTA	NA	False	NA	-18	True	AATAAA	-21	NA	89568157	89547832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89568035
m54284U_201201_044215/65143959/ccs	chr7	-	1416	9	NIC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	867.36281336013	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGGTTCTGTCAGGTT	5070	False	NA	NA	False	AATAAA	-13	NA	126391668	126385039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388307_126391232_126391396_126391594
m54284U_201201_044215/65274005/ccs	chr12	-	187	1	Intergenic	novelGene_6625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGTGGTGGCACATG	NA	False	NA	NA	False	NA	NA	NA	43804768	43804581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_43804600_43804800
m54284U_201201_044215/65274025/ccs	chr19	-	2105	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_11	358.775078696146	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407225	27367460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398869_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
m54284U_201201_044215/65274134/ccs	chr8	+	4610	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	21.9062423691205	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567619	86787270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_86567733_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
m54284U_201201_044215/65274909/ccs	chr11	-	3172	7	NNC	ENSMUSG00000049321.18	novel	2782	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	27.6887462097269	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTTGGTCATGGTATT	NA	False	NA	0	True	NA	NA	NA	50806992	50789538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_50792119_50796432_50796514_50796916_50796985_50801262_50801353_50801532_50801704_50803106_50803232_50806935
m54284U_201201_044215/65275208/ccs	chr4	-	1056	8	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_7	877.288982709616	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGAGGCTTCTGTTGG	NA	False	NA	-5	True	AATAAA	-17	NA	117744530	117741526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743892_117744366
m54284U_201201_044215/65275447/ccs	chr10	-	2645	16	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	70.2071854505569	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8106	False	NA	-11	True	ATTAAA	-28	NA	62486997	62451793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62483312_62483423_62486803
m54284U_201201_044215/65340857/ccs	chr3	-	4599	10	NIC	ENSMUSG00000019338.14	novel	4617	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_9	37.0118432830611	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGGCTTTTCTTTTTAT	NA	False	NA	-1	True	ATTAAA	-22	NA	94922759	94914142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922630
m54284U_201201_044215/65404995/ccs	chr2	-	2775	7	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_6	81.7598108282221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
m54284U_201201_044215/65405055/ccs	chr3	+	806	4	NNC	ENSMUSG00000097532.3	novel	412	2	NA	NA	-342	-90	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	52.0917993119412	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTGTTTGTTTT	NA	False	NA	-82	True	AGTAAA	-16	NA	95334639	95338308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_95334711_95335864_95336134_95337597_95337750_95337994
m54284U_201201_044215/65406281/ccs	chr5	+	4929	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	295.923513364134	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	766	False	NA	14	True	NA	NA	NA	75735614	75817382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_75735779_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
m54284U_201201_044215/65470760/ccs	chr4	+	197	1	Intergenic	novelGene_2145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAACTCAGGGCCTCTG	4869	False	NA	NA	False	NA	NA	NA	129260486	129260683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129260500_129260700
m54284U_201201_044215/65536963/ccs	chr9	-	185	1	Intergenic	novelGene_4745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAATAAATAAGTAACAAA	9593	False	NA	NA	False	NA	NA	NA	45935585	45935400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_45935400_45935600
m54284U_201201_044215/65537693/ccs	chr13	+	3174	17	NIC	ENSMUSG00000035139.15	novel	3328	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	37.006703362364	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	5538	False	NA	8	True	AATAAA	-20	NA	51805776	51838080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_51805857_51806642_51806792_51808531_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
m54284U_201201_044215/6554875/ccs	chr6	+	2563	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_13	416.448438315175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71851300
m54284U_201201_044215/6555322/ccs	chr5	-	4568	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	0	-106	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	58.3812563563855	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087122	20963766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
m54284U_201201_044215/6555695/ccs	chr3	-	2325	12	NIC	ENSMUSG00000068921.15	novel	1375	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	805	junction_3	48.6716099983831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88857258	88830941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_88831221_88832600_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
m54284U_201201_044215/656648/ccs	chr11	-	3444	11	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	0	-109	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	97.1464873271288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCTTGTAATCTGATTT	NA	False	NA	-16	True	AATAAA	-15	NA	65679123	65579177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65647094_65647198_65666558_65666592_65678961
m54284U_201201_044215/65667527/ccs	chr11	-	3593	10	NIC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	43.6750062717741	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397046	59376345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394590_59394973_59395081_59396653_59396789_59396989
m54284U_201201_044215/65668632/ccs	chr4	+	4207	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	152.22716372251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225248	107273543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
m54284U_201201_044215/65669837/ccs	chr1	-	2067	10	NNC	ENSMUSG00000026047.14	novel	2359	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	99.7145308083079	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGTTTTGTTACAGTT	NA	False	NA	-5	True	AATAAA	-17	NA	44157968	44146044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152115_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
m54284U_201201_044215/65799173/ccs	chr11	+	3521	9	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	0	60	intron_retention	FALSE	canonical	3	2673	junction_3	114.06241438353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTATATGTTGTTTT	NA	False	NA	14	True	ATTAAA	-17	NA	107370309	107388619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107386592_107388349
m54284U_201201_044215/658093/ccs	chr5	-	5662	13	NIC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	749	junction_9	48.9020421068714	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347856	52307544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
m54284U_201201_044215/65864205/ccs	chr15	+	1686	9	NNC	ENSMUSG00000060992.10	novel	1676	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	355.432131355622	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGGCTC	NA	False	NA	29	True	AATAAA	-17	NA	103181327	103208292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_103181369_103197527_103197597_103199101_103199188_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
m54284U_201201_044215/65929967/ccs	chr6	-	1256	9	NIC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	189.765480264457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	False	NA	-41	True	AATAAA	-18	NA	115014837	114981348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011116_115011212_115011911_115012095_115014610
m54284U_201201_044215/65931157/ccs	chr4	-	3557	20	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_19	79.1919019895357	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7420	False	NA	-6	True	TATAAA	-12	NA	155753655	155739139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
m54284U_201201_044215/65931448/ccs	chr17	+	218	1	Intergenic	novelGene_8493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGCAGAAAAAGGAAACAA	NA	False	NA	NA	False	NA	NA	NA	29707062	29707280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29707100_29707300
m54284U_201201_044215/66062443/ccs	chr16	+	1784	1	FSM	ENSMUSG00000034379.10	ENSMUST00000042203.10	2739	1	0	955	0	-955	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATGATAAACTATCCAA	4378	False	NA	NA	False	AATAAA	-20	NA	35861559	35863343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_35861600_35863300
m54284U_201201_044215/66126667/ccs	chr5	+	4463	5	NNC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_2	915.612465784515	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTTTCATTTATTCAGT	NA	False	NA	25	True	AATAAA	-15	NA	34493760	34510780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_34493886_34499865_34500024_34504120_34504246_34506007_34507416_34508133
m54284U_201201_044215/66126672/ccs	chr10	-	191	1	Intergenic	novelGene_5363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCCACATCAAATACAGA	NA	False	NA	NA	False	NA	NA	NA	63112512	63112321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_63112300_63112500
m54284U_201201_044215/66127692/ccs	chr10	-	1610	6	NIC	ENSMUSG00000035478.15	novel	1662	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	303	junction_5	389.715485963799	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235256	80228372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
m54284U_201201_044215/66192455/ccs	chr11	-	3776	19	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-508	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	108.49533471224	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3801	False	NA	-4	True	ATTAAA	-19	NA	60111430	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60097013_60097137_60097220_60097400_60097663_60098084_60111278
m54284U_201201_044215/6619530/ccs	chr9	+	3050	14	NIC	ENSMUSG00000032598.9	novel	3360	13	NA	NA	0	-386	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	28.6732252485458	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCCTGTATGATGATGC	3155	False	NA	10	True	AATAAA	-21	NA	108685571	108695657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108685854_108688020_108688102_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
m54284U_201201_044215/6621681/ccs	chr9	+	2201	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_3	6242.18814002832	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
m54284U_201201_044215/6621961/ccs	chr17	-	4734	7	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	128	junction_4	29.9833287011299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGGCAAACAGCCAGT	NA	False	NA	-16	True	ATTAAA	-18	NA	32583437	32573034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32578469_32580434_32580939_32581766_32581938_32583155
m54284U_201201_044215/66322519/ccs	chr4	-	192	1	Intergenic	novelGene_2055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGGTCAACCCAG	2085	False	NA	NA	False	NA	NA	NA	118407165	118406973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_118407000_118407200
m54284U_201201_044215/66323850/ccs	chr17	+	2607	8	NIC	ENSMUSG00000023984.18	novel	4807	9	NA	NA	-4	-2805	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	76.6638567955951	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCTTCTATGAAGATCC	NA	False	NA	6	True	TATAAA	-3	NA	47922509	47991981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47922618_47923887_47924043_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
m54284U_201201_044215/66324147/ccs	chr9	-	4036	23	NNC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_21	156.078578694428	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTCCTCCCAAGG	NA	False	NA	-1	True	AATAAA	-21	NA	109946499	109913387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944224_109944558_109944651_109946425
m54284U_201201_044215/66324952/ccs	chr8	-	1254	8	NIC	ENSMUSG00000038515.11	novel	3013	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	136.644929414501	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTCCATTTTTTCCTA	3640	False	NA	-21	True	TTTAAA	-18	NA	13250617	13226921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_13227143_13229322_13229509_13229582_13229760_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
m54284U_201201_044215/66324970/ccs	chr16	+	195	1	Intergenic	novelGene_8266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGGCTTCCTATGTAAA	NA	False	NA	NA	False	NA	NA	NA	45750375	45750570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_45750400_45750600
m54284U_201201_044215/66325000/ccs	chr9	-	180	1	Intergenic	novelGene_4940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAATGAAAGA	NA	False	NA	NA	False	NA	NA	NA	72794513	72794333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72794300_72794500
m54284U_201201_044215/66325205/ccs	chr2	-	3338	24	NIC	ENSMUSG00000035000.9	novel	5268	26	NA	NA	0	-1559	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	61.9946030945795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATGGGTTATGTCTTGA	NA	False	NA	-3	True	AGTAAA	-20	NA	62242365	62161975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195271_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62217408_62217505_62241558_62241644_62242129
m54284U_201201_044215/66325282/ccs	chr13	-	175	1	Intergenic	novelGene_7314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAAGCAAGCT	NA	False	NA	NA	False	NA	NA	NA	113926696	113926521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_113926500_113926700
m54284U_201201_044215/66388170/ccs	chr4	-	4074	25	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	196.907761824329	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	209	False	NA	-6	True	AATAAA	-12	NA	41275144	41194315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
m54284U_201201_044215/66388840/ccs	chr11	-	3289	13	ISM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	9191	0	-269	0	3prime_fragment	FALSE	canonical	3	11	junction_5	5.70270403697521	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCCTTGTGTTTTGATG	NA	False	NA	-3	True	AATAAA	-19	NA	69295310	69289333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831
m54284U_201201_044215/66390014/ccs	chr15	+	2679	12	NNC	ENSMUSG00000022385.12	novel	2641	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_9	171.684219060402	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGACGTGTAGAGCTG	7137	False	NA	30	True	ATTAAA	-41	NA	85743945	85760774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759180_85759420_85759736_85759953_85760349
m54284U_201201_044215/66454942/ccs	chr15	+	1005	8	NNC	ENSMUSG00000023039.18	novel	3563	8	NA	NA	2701	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	10.6885404971485	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGCTGCATCGGCTAGCT	NA	False	NA	6	True	AATAAA	-13	NA	101313030	101325670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_101313056_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
m54284U_201201_044215/66456115/ccs	chr2	+	1103	7	NNC	ENSMUSG00000008333.13	novel	636	5	NA	NA	0	-1113	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	366.493140757398	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTACTGGTTTATTG	2080	False	NA	13	True	AATAAA	-13	NA	142905050	142913660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_142905266_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
m54284U_201201_044215/66519570/ccs	chr17	+	4551	14	NIC	ENSMUSG00000015127.15	novel	4779	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	15.8737623568248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGATCTTTGGGC	NA	False	NA	3	True	ATTAAA	-15	NA	25407370	25453417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25407467_25408439_25408650_25418740_25418918_25420015_25420150_25424572_25424709_25427062_25427181_25428527_25428613_25429777_25429861_25432020_25432081_25437551_25437730_25447556_25447641_25449180_25449384_25449494_25449750_25450685
m54284U_201201_044215/66521350/ccs	chr18	+	2045	1	Intergenic	novelGene_9036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAGGGAGGGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	77773144	77775189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_77773100_77775200
m54284U_201201_044215/66521421/ccs	chr13	+	2325	21	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	180.040682902504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201201_044215/66585103/ccs	chr6	-	2482	19	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_16	191.882044849961	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
m54284U_201201_044215/66650154/ccs	chr1	+	2277	11	NNC	ENSMUSG00000072258.12	novel	2384	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	22.8624145706441	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGTAGTATTTTATTC	NA	False	NA	16	True	AATAAA	-27	NA	183170324	183191020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_183170431_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189544_183190053
m54284U_201201_044215/66715681/ccs	chr6	+	4325	25	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-134	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_15	20.8844373211782	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369645	140542836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
m54284U_201201_044215/66717970/ccs	chr17	+	3541	6	NIC	ENSMUSG00000073468.13	novel	2490	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	775	junction_5	42.1872018507983	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2990	False	NA	NA	False	AATAAA	-19	NA	8530000	8546274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8542168_8543265_8543296_8545786
m54284U_201201_044215/66718258/ccs	chr5	+	3028	13	NNC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	31.3407570992718	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168039	146239684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236504_146236661_146238385
m54284U_201201_044215/66782215/ccs	chr7	-	1162	4	ISM	ENSMUSG00000030577.15	ENSMUST00000189718.7	3672	13	10544	0	5514	0	3prime_fragment	FALSE	canonical	2	5	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTTTGTATTGGTGAT	NA	False	NA	NA	False	ATTAAA	-21	NA	30567330	30565253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_30566088_30566442_30566528_30566886_30567006_30567206
m54284U_201201_044215/66782286/ccs	chr2	+	3199	13	ISM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	-88	1006	-88	983	intron_retention	FALSE	canonical	3	2736	junction_8	168.284213130314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896518	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469
m54284U_201201_044215/66783670/ccs	chr4	-	185	1	Intergenic	novelGene_1955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAGAGGACTAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	100717431	100717246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_100717200_100717400
m54284U_201201_044215/66849465/ccs	chr7	+	5798	12	NIC	ENSMUSG00000031028.15	novel	772	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	6.12676016199791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTGTGTCCTTGGTTTTC	NA	False	NA	15	True	ATTAAA	-15	NA	108549863	108633667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_108549979_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
m54284U_201201_044215/6686110/ccs	chr12	+	185	1	Intergenic	novelGene_6879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTGATCCCAGCACT	NA	False	NA	NA	False	NA	NA	NA	105917470	105917655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105917500_105917700
m54284U_201201_044215/66912301/ccs	chr12	+	212	1	Intergenic	novelGene_6829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTCTTATCATGTGTA	8265	False	NA	NA	False	NA	NA	NA	87382169	87382381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_87382200_87382400
m54284U_201201_044215/66912534/ccs	chr18	+	2694	17	NNC	ENSMUSG00000024313.9	novel	617	7	NA	NA	-276	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_6	16.5481069536669	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGTGATCTTTCTCCC	NA	False	NA	9	True	AATAAA	-21	NA	21194703	21233256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_21194811_21194905_21195074_21200485_21200594_21203810_21203948_21208707_21208759_21209403_21209445_21213486_21213566_21217135_21217254_21219218_21219398_21221601_21221821_21222381_21222535_21224130_21224347_21226277_21226722_21227980_21228161_21229185_21229319_21230344_21230550_21233100
m54284U_201201_044215/66980690/ccs	chr7	+	2991	17	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_8	127.725719316824	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTCCAGGCCATCTG	NA	False	NA	16	True	AATAAA	-16	NA	16550241	16574856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
m54284U_201201_044215/67043630/ccs	chr16	-	3367	6	NIC	ENSMUSG00000022822.17	novel	1136	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_1	79.0554235963606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTATTTACTGCTG	NA	False	NA	-9	True	AATAAA	-17	NA	20245104	20219510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20219822_20221009_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
m54284U_201201_044215/67175440/ccs	chr2	-	176	1	Intergenic	novelGene_1283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	170055847	170055671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_170055700_170055800
m54284U_201201_044215/67175644/ccs	chr8	-	194	1	FSM	ENSMUSG00000109640.2	ENSMUST00000210389.2	3538	1	1706	1638	1706	-1638	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGGGAACCAGGCTGC	NA	False	NA	NA	False	NA	NA	NA	26554374	26554180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26554200_26554400
m54284U_201201_044215/67175949/ccs	chr17	+	2385	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	208.4942205434	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTATTGGCTTAGGTGC	NA	False	NA	NA	False	TATAAA	-25	NA	56388423	56407607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
m54284U_201201_044215/67175985/ccs	chr8	+	4783	29	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	128	junction_16	71.6479755328731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615227_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
m54284U_201201_044215/67176452/ccs	chr17	-	820	7	NIC	ENSMUSG00000061613.14	novel	975	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_6	2337.08556040781	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGTGACTTCTTGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	31877729	31866055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31877626
m54284U_201201_044215/67306654/ccs	chr1	+	186	1	Intergenic	novelGene_332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGTCTGTAATTATAG	NA	False	NA	NA	False	NA	NA	NA	134885876	134886062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_134885900_134886100
m54284U_201201_044215/67372771/ccs	chr4	+	1371	9	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	225.311693826574	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407541	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_117407560_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
m54284U_201201_044215/67373894/ccs	chr4	+	2575	20	NNC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_7	120.743885445915	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724056_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201201_044215/67436779/ccs	chr8	-	4269	8	NIC	ENSMUSG00000031729.7	novel	3633	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	544	junction_2	46.3676523416214	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAGTGTTGGTCAAAT	NA	False	NA	-16	True	AATAAA	-17	NA	110419892	110397959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110399274_110402007_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201201_044215/6751006/ccs	chr11	-	3372	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	0	206	at_least_one_novel_splicesite	FALSE	canonical	3	150	junction_3	570.471345078397	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCGAGGTCTGGTCTTG	NA	False	NA	-2	True	CATAAA	-43	NA	96714839	96708801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
m54284U_201201_044215/6751412/ccs	chr15	+	2610	17	NIC	ENSMUSG00000022477.14	novel	2918	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	39	junction_15	470.793607745209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	NA	False	NA	19	True	AAAAAG	-16	NA	81756684	81799334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81798438_81798561_81798828
m54284U_201201_044215/6752247/ccs	chr14	+	1630	8	Fusion	ENSMUSG00000022194.16_ENSMUSG00000089682.11	novel	903	5	NA	NA	94	755	multi-exon	FALSE	canonical	3	17	junction_2	1110.05826285775	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55121057	55136381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr14_+_55121162_55121253_55121342_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
m54284U_201201_044215/6752704/ccs	chr7	-	1530	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	214	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_2	378.359160482454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTCTTGGACTTGA	NA	False	NA	-32	True	AATAAA	-16	NA	46569717	46539119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_46539453_46540669_46540910_46542101_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
m54284U_201201_044215/67634078/ccs	chrX	+	2792	23	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	16.0309617782961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3259	False	NA	11	True	NA	NA	NA	7656232	7686806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
m54284U_201201_044215/67634633/ccs	chr17	-	1433	7	NIC	ENSMUSG00000002076.13	novel	1479	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_4	419.803393136464	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTTAGGAAGTGGT	NA	False	NA	-13	True	AATAAA	-30	NA	32253511	32165055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32241739_32241844_32252234_32252386_32253418
m54284U_201201_044215/67635942/ccs	chr4	-	176	1	Intergenic	novelGene_2322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGGGTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	143882161	143881985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_143882000_143882200
m54284U_201201_044215/67699298/ccs	chr9	-	2059	16	NNC	ENSMUSG00000032382.15	novel	2073	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	132.531187105359	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACTGGGCATGGTAGCA	NA	False	NA	-4	True	AATAAA	-20	NA	66032079	65995414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66023732_66023808_66031888
m54284U_201201_044215/67700030/ccs	chr13	+	2146	20	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_9	185.485870918109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201201_044215/67700110/ccs	chr4	+	3591	8	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2684	junction_7	243.214778686306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2358	False	NA	19	True	AATAAA	-19	NA	132262887	132281053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_132262975_132265497_132265600_132269092_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
m54284U_201201_044215/67723/ccs	chr10	-	638	3	Intergenic	novelGene_5225	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	118	junction_1	2.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGGTGTCAGTGGCTC	NA	False	NA	-24	True	AGTAAA	-13	NA	21934488	21930760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_21931017_21933427_21933570_21934248
m54284U_201201_044215/67830514/ccs	chr7	-	3108	9	NNC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_4	316.438555449553	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479179	81441821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450132_81450240_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
m54284U_201201_044215/67832121/ccs	chr12	+	5105	15	NIC	ENSMUSG00000021112.10	novel	5470	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	41.9492526264577	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCACTGGACACTTTC	NA	False	NA	16	True	AATAAA	-25	NA	78795765	78887360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_78795881_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
m54284U_201201_044215/67832575/ccs	chr5	-	1110	7	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	151	junction_2	333.583281289029	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186754	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100182844_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
m54284U_201201_044215/67896626/ccs	chr11	-	4478	4	NIC	ENSMUSG00000038615.18	novel	4654	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	71	junction_1	306.275475130913	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96720794	96708256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96711343_96712929_96713146_96718023_96719050_96720644
m54284U_201201_044215/67897832/ccs	chr2	-	2062	17	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_12	678.943661943869	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022132	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
m54284U_201201_044215/67960975/ccs	chr7	-	158	1	Intergenic	novelGene_3939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	82623683	82623525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_82623500_82623700
m54284U_201201_044215/67962842/ccs	chr17	-	4678	8	NIC	ENSMUSG00000023883.14	novel	3901	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	797	junction_5	62.3171611310125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181535	15167999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_15170978_15172881_15173036_15174276_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
m54284U_201201_044215/68027754/ccs	chrX	+	1486	8	NIC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	505.773079713883	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235816	72246536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241891_72241992_72245455_72245552_72245645
m54284U_201201_044215/68028525/ccs	chr3	+	998	7	NIC	ENSMUSG00000019710.14	novel	1339	6	NA	NA	0	-214	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	348.953992510315	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCTCTGCCTCTCCCAA	NA	False	NA	51	True	AATAAA	-29	NA	87826842	87830755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87827013_87827109_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
m54284U_201201_044215/68028764/ccs	chrX	+	2458	12	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_9	1341.2741752614	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473288	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100474101_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488424_100488900_100488941_100489724_100489835_100491199
m54284U_201201_044215/68028819/ccs	chr2	+	3325	11	NIC	ENSMUSG00000038696.15	novel	3111	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	63.4010252283037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296873	34514962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34471203_34471345_34487434_34487573_34509856_34509955_34513434
m54284U_201201_044215/68092031/ccs	chr2	-	7870	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39377	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_32	41.9515172063939	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1547	False	NA	-4	True	AATAAA	-19	NA	59881037	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59880905
m54284U_201201_044215/68157548/ccs	chr5	-	2587	17	NIC	ENSMUSG00000038780.15	novel	5343	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	67.2339374404772	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCAGCCTCCTTGGCAC	NA	False	NA	-39	True	AATAAA	-16	NA	144902657	144815920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
m54284U_201201_044215/68159465/ccs	chr16	+	2570	10	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	575.550128674544	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
m54284U_201201_044215/6816876/ccs	chr15	-	1851	15	NIC	ENSMUSG00000016554.10	novel	1899	15	NA	NA	104	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_14	427.115718201396	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	3017	False	NA	-11	True	AATAAA	-24	NA	77854741	77843197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854658
m54284U_201201_044215/6817564/ccs	chr6	+	600	2	NNC	ENSMUSG00000108111.2	novel	661	2	NA	NA	32409	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTCTGTGGTGTGTAAT	9363	False	NA	NA	False	AATACA	-11	NA	90495783	90496462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_90495862_90495940
m54284U_201201_044215/6817831/ccs	chr2	+	2628	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	983	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_12	796.023304050652	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896536	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924556_162924620_162925085
m54284U_201201_044215/68223152/ccs	chr2	-	197	1	Intergenic	novelGene_935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCGGGCGTGATGGCGC	2096	False	NA	NA	False	NA	NA	NA	91582889	91582692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91582700_91582900
m54284U_201201_044215/68225634/ccs	chr10	-	1273	4	NIC	ENSMUSG00000003346.15	novel	1468	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	157.557044343381	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGCTTGGCTCCTTTGT	7798	False	NA	-5	True	ATTAAA	-15	NA	80426175	80419487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80419898_80419976_80420157_80422348_80422865_80426008
m54284U_201201_044215/68225843/ccs	chr7	+	1594	9	NIC	ENSMUSG00000030638.14	novel	1647	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_2	110.22469947793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGTTATTTTCAATGTC	NA	False	NA	17	True	AATAAA	-24	NA	81824589	81956627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_81824768_81909339_81909409_81917494_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
m54284U_201201_044215/68289257/ccs	chr1	+	1849	8	NIC	ENSMUSG00000026456.19	novel	1837	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	337	junction_4	39.0227563122351	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTCGTCGTGTCTGGG	8218	False	NA	43	True	AATAAA	-31	NA	134333765	134339478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
m54284U_201201_044215/68354614/ccs	chr1	+	176	1	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAACCTGAATTT	NA	False	NA	NA	False	NA	NA	NA	37974029	37974205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_37974000_37974200
m54284U_201201_044215/68356313/ccs	chr12	-	2174	6	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_4	341.990994033469	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111636449_111636595_111637782_111637858_111638014_111638199_111638408_111638663
m54284U_201201_044215/68419871/ccs	chr7	+	2971	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	322.785929329083	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648595_3648991_3649065_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201201_044215/68445/ccs	chr9	+	7717	10	NIC	ENSMUSG00000037674.16	novel	7880	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	93	junction_8	52.1964475400622	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGATGTTAAGATAATTTA	680	False	NA	NA	False	ATTAAA	-21	NA	72439524	72530111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_72439940_72440099_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
m54284U_201201_044215/68485425/ccschrUn	chrUn_JH584304v1	-	1936	8	Intergenic	novelGene_9759	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	95	junction_2	266.612613569362	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59716	52189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_53833_54318_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591
m54284U_201201_044215/68487437/ccs	chr11	-	2728	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_10	155.988332897047	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
m54284U_201201_044215/68550928/ccs	chr10	-	4638	11	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_10	38.3198382042513	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	-1	True	ATTAAA	-24	NA	120815237	120759317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120813688
m54284U_201201_044215/68551682/ccs	chr11	-	184	1	Intergenic	novelGene_5803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGGTTCCTACCACAG	869	False	NA	NA	False	NA	NA	NA	50223767	50223583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_50223600_50223800
m54284U_201201_044215/68551745/ccs	chr7	+	7357	14	NIC	ENSMUSG00000059273.10	novel	333	2	NA	NA	-1285	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	34.2757699018835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTCTAGTCTCATC	3196	False	NA	18	True	ATTAAA	-22	NA	16133549	16171621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16134967_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
m54284U_201201_044215/68551906/ccs	chr4	+	157	1	Intergenic	novelGene_2267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAATTTAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	137100189	137100346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_137100200_137100300
m54284U_201201_044215/68618410/ccs	chr5	+	6253	18	NIC	ENSMUSG00000048271.15	novel	6256	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	36.3348517719172	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	7	True	CATAAA	-21	NA	28522174	28621103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
m54284U_201201_044215/68682570/ccs	chr7	-	211	1	Intergenic	novelGene_3886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGAACTCTCAGCTCC	NA	False	NA	NA	False	NA	NA	NA	67905256	67905045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_67905000_67905300
m54284U_201201_044215/68683781/ccs	chr6	+	2802	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	0	384	combination_of_known_junctions	FALSE	canonical	3	45	junction_6	200.648235192125	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATTGGAGTACATTTT	9660	False	NA	19	True	AATAAA	-13	NA	100810582	100844967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842748_100843045_100843217
m54284U_201201_044215/68747619/ccs	chr5	-	3283	17	NIC	ENSMUSG00000028771.14	novel	3280	18	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	18.4483019205021	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATTGTATTGTTTTTTT	NA	False	NA	-2	True	ATTAAA	-24	NA	21261022	21191643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21260646
m54284U_201201_044215/68812961/ccs	chr10	-	1931	16	ISM	ENSMUSG00000019989.9	ENSMUST00000020169.9	4253	25	30184	1425	-8270	0	3prime_fragment	FALSE	canonical	1	2	junction_4	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATTTTTCCTTAAC	NA	False	NA	NA	False	AATAAA	-1	NA	24681939	24649728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_-_24649971_24650680_24650838_24652658_24652792_24653791_24653870_24654590_24654724_24660687_24660843_24662356_24662412_24663616_24663796_24667886_24667975_24669482_24669550_24671583_24671712_24673656_24673689_24674049_24674179_24675055_24675165_24680296_24680370_24681766
m54284U_201201_044215/68813832/ccs	chr7	+	1475	9	NIC	ENSMUSG00000030815.12	novel	1570	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	33.5016324229134	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTCTGCTGTCTAGT	NA	False	NA	26	True	AATAAA	-27	NA	127172551	127182479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127172629_127173025_127173139_127176706_127176819_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
m54284U_201201_044215/68815140/ccs	chr14	-	2563	13	NIC	ENSMUSG00000021810.4	novel	3132	14	NA	NA	0	-400	combination_of_known_junctions	FALSE	canonical	2	24	junction_11	141.925939215572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTCAGTCTGTGACATTC	NA	False	NA	-1	True	AATAGA	-16	NA	20398138	20370319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20396678_20396890_20397861
m54284U_201201_044215/6882616/ccs	chr3	-	1031	6	NIC	ENSMUSG00000105662.5	novel	3135	19	NA	NA	420	0	combination_of_known_splicesites	TRUE	canonical	2	4	junction_2	13.8188277360998	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGTTAGACTCCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	35691294	35672771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_35673025_35673834_35673956_35678500_35678611_35681522_35681682_35682985_35683124_35691044
m54284U_201201_044215/6883952/ccs	chr7	+	2250	4	ISM	ENSMUSG00000048897.16	ENSMUST00000166250.8	3606	6	0	4984	0	0	5prime_fragment	TRUE	canonical	3	198	junction_1	67.6214955961983	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACACGTTGAGTGCTGT	NA	False	NA	1	True	AATAAA	-9	NA	79674581	79736594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_79674735_79730796_79732289_79735698_79735891_79736181
m54284U_201201_044215/68880856/ccs	chr7	+	174	1	Intergenic	novelGene_3733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTATTTAAAAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	27982449	27982623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_27982400_27982600
m54284U_201201_044215/68946254/ccs	chr7	+	3515	12	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	75.7006937968359	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCTTTTATTTGGTTC	NA	False	NA	23	True	AATAAA	-25	NA	130467616	130515042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
m54284U_201201_044215/69076828/ccs	chr17	+	4661	18	NIC	ENSMUSG00000064043.16	novel	3255	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	14.9504371486006	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	NA	False	NA	20	True	AATAAA	-25	NA	47452141	47670388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47452331_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
m54284U_201201_044215/69140788/ccs	chr17	-	1212	7	NNC	ENSMUSG00000039615.10	novel	1803	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_5	546.882579312557	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6753	False	NA	-19	True	AATAAA	-15	NA	26051927	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050884_26051019_26051219_26051665
m54284U_201201_044215/69142351/ccs	chr11	-	2662	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	151.780631175391	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
m54284U_201201_044215/69207016/ccs	chr17	+	554	4	NNC	ENSMUSG00000041881.14	novel	528	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	3940.96522299917	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTCTTAGTATTTA	4115	False	NA	33	True	AATATA	-24	NA	34043586	34057291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34043655_34044574_34044692_34048640_34048791_34057072
m54284U_201201_044215/69273093/ccs	chr2	+	180	1	Intergenic	novelGene_953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	95859297	95859477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_95859300_95859500
m54284U_201201_044215/69274255/ccs	chr8	-	3186	11	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	414.818562747619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426921	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
m54284U_201201_044215/69339526/ccs	chr6	-	4832	18	NIC	ENSMUSG00000030029.15	novel	4849	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_2	29.2854936514361	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCGGCGGTCACTGC	6739	False	NA	NA	False	AATAAA	-21	NA	94677139	94581509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_94582985_94583083_94583345_94585020_94585147_94585689_94586110_94586597_94586880_94588352_94588674_94590544_94590709_94593369_94593442_94594226_94594299_94597233_94597315_94599595_94599740_94601910_94602055_94603349_94603494_94604940_94605085_94607082_94607221_94631827_94631903_94640907_94640980_94676442
m54284U_201201_044215/69339804/ccs	chr17	-	2346	6	NIC	ENSMUSG00000038500.16	novel	2727	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	36.7205664444327	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTCTCATTTCTCTG	NA	False	NA	-1	True	AATAAA	-16	NA	36291128	36283432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602_36289674_36290018_36290148_36290599
m54284U_201201_044215/69468767/ccs	chr7	+	2028	12	NIC	ENSMUSG00000015165.17	novel	2679	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	71	junction_1	1728.06478490433	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28508230	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28508285_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
m54284U_201201_044215/69470461/ccs	chr6	+	2253	11	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	30	junction_4	267.908211893551	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023275	113045234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_113023352_113024375_113024666_113026299_113026378_113027717_113027898_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
m54284U_201201_044215/6947212/ccs	chr16	-	1449	5	NNC	ENSMUSG00000022864.15	novel	1271	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	130.840312977308	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGGTTACTCAATCA	3192	False	NA	-4	True	AATAAA	-13	NA	78373596	78341848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373184
m54284U_201201_044215/69534031/ccs	chr10	-	153	1	Intergenic	novelGene_5430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	77659240	77659087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_77659100_77659200
m54284U_201201_044215/69535372/ccs	chr14	-	1378	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1238.64623270566	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
m54284U_201201_044215/69600567/ccs	chr13	+	1441	5	NIC	ENSMUSG00000021707.6	novel	5347	6	NA	NA	421	-3369	combination_of_known_splicesites	TRUE	canonical	3	22	junction_4	636.728896391549	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTCCTCATCTCAGCA	NA	False	NA	14	True	AATAAA	-17	NA	92491654	92522192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92521232
m54284U_201201_044215/69601632/ccs	chr10	+	200	1	Intergenic	novelGene_5304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAATGTTAAG	NA	False	NA	NA	False	NA	NA	NA	58154953	58155153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_58155000_58155200
m54284U_201201_044215/69601831/ccs	chr16	+	2542	3	Intergenic	novelGene_8053	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTAAGTATGCTGAATTA	NA	False	NA	NA	False	AATAAA	-23	NA	10286376	10292038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_10286474_10289437_10289520_10289675
m54284U_201201_044215/69602127/ccs	chr18	-	2326	9	NNC	ENSMUSG00000038425.19	novel	3504	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_6	112.236357745608	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACACTAGGCTCTCACTG	NA	False	NA	-21	True	AATAAA	-14	NA	70663339	70641759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658414_70658600_70659627_70659793_70663258
m54284U_201201_044215/69665504/ccs	chr4	-	190	1	Intergenic	novelGene_2058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACAAAGAGTTTTCAGA	NA	False	NA	NA	False	NA	NA	NA	119014875	119014685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_119014700_119014900
m54284U_201201_044215/69665632/ccs	chr5	-	5278	11	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	4940	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	119.866634223207	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114099877	114077825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114099801
m54284U_201201_044215/69730876/ccs	chr5	-	183	1	Intergenic	novelGene_2838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAGAAAAAG	NA	False	NA	NA	False	NA	NA	NA	120354261	120354078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_120354100_120354300
m54284U_201201_044215/69731213/ccs	chr11	-	2181	3	Intergenic	novelGene_5771	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCAGAGATGGTTTTTG	NA	False	NA	NA	False	AATAAA	-29	NA	33494291	33481419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_33483454_33490994_33491103_33494252
m54284U_201201_044215/69733121/ccs	chr4	+	177	1	Intergenic	novelGene_2300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGGAGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	140854034	140854211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_140854000_140854200
m54284U_201201_044215/69797153/ccs	chr12	-	3560	32	NIC	ENSMUSG00000020982.10	novel	4732	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	64.5938564038382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATAACACAAGAA	NA	False	NA	-30	True	NA	NA	NA	69403939	69358341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69402803_69402907_69403052_69403122_69403824
m54284U_201201_044215/69798206/ccs	chr6	-	957	7	NNC	ENSMUSG00000058979.8	novel	1882	3	NA	NA	0	-3388	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	80.8386596183341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAACAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	120508280	120489842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_120490030_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
m54284U_201201_044215/69798569/ccs	chr6	-	217	1	Intergenic	novelGene_3296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAACTTATTGTATACT	NA	False	NA	NA	False	NA	NA	NA	60284709	60284492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_60284500_60284700
m54284U_201201_044215/69861971/ccs	chr7	+	3051	16	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19220	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	34.4705993887867	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTTGCTTT	NA	False	NA	26	True	AATAAA	-26	NA	35052974	35091714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179_35090736_35091033
m54284U_201201_044215/69862239/ccs	chr18	-	4385	24	NIC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	235	junction_14	265.896614216495	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982043	60946826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
m54284U_201201_044215/69862289/ccs	chr2	-	4778	2	NIC	ENSMUSG00000086563.2	novel	768	3	NA	NA	0	2840	intron_retention	FALSE	canonical	3	31	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTATTTGGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	150548796	150543615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_150548201_150548603
m54284U_201201_044215/69862549/ccs	chr12	+	8441	52	NIC	ENSMUSG00000035954.11	novel	8552	53	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_26	3.40341552215641	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGCCTTTATTCCAG	NA	False	NA	17	True	AATAAA	-20	NA	40496034	40896873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
m54284U_201201_044215/69927225/ccs	chr5	+	1769	11	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1007.46246083911	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377825	38391650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_38377980_38380274_38380399_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
m54284U_201201_044215/69928196/ccs	chr8	+	1264	9	NNC	ENSMUSG00000038005.16	novel	1191	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	365.929211050443	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTAGTGTTTCTTTCA	NA	False	NA	22	True	AATAAA	-35	NA	61343478	61360614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61359405_61359473_61360370
m54284U_201201_044215/69928434/ccs	chr5	+	10591	61	NIC	ENSMUSG00000056602.14	novel	4379	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_34	8.06611568366226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTATTTTTATATGTG	1275	False	NA	9	True	ATTAAA	-15	NA	150119930	150421218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_150120201_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150336648_150336906_150337968_150338116_150339652_150339822_150341926_150342018_150346174_150346258_150349665_150349817_150350492_150350597_150351517_150351704_150353190_150353390_150355133_150355256_150356981_150357170_150358233_150358329_150360165_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
m54284U_201201_044215/69929129/ccs	chr4	+	5006	26	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	26	junction_4	22.9307130285999	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126450787	126487696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
m54284U_201201_044215/69929201/ccs	chr16	+	2806	9	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_3	601.546223805785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
m54284U_201201_044215/69929576/ccs	chr5	-	259	1	Intergenic	novelGene_2671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAAGATCCAGCT	7484	False	NA	NA	False	NA	NA	NA	92355820	92355561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92355600_92355800
m54284U_201201_044215/69929653/ccs	chr15	-	2315	20	NIC	ENSMUSG00000015377.11	novel	4585	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_19	26.5207805419452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCCCTGACTATTGG	NA	False	NA	1	True	AGTAAA	-19	NA	89080699	89069014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89077137_89077322_89080421
m54284U_201201_044215/69929712/ccs	chr4	-	1232	6	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	0	194	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	110.937099295051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAGGCTTTATTCCTAT	NA	False	NA	-12	True	CATAAA	-28	NA	130253736	130209877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130253668
m54284U_201201_044215/69993255/ccs	chr4	-	3304	11	NIC	ENSMUSG00000043207.11	novel	3429	10	NA	NA	182	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	109.30969764847	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTGGTGTTGGGTTTGA	NA	False	NA	-1	True	ATTAAA	-20	NA	120955256	120916433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120946053_120946111_120952748_120952896_120955073
m54284U_201201_044215/69994601/ccs	chr17	-	738	5	NNC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-392832	-2550	at_least_one_novel_splicesite	FALSE	canonical	3	556	junction_4	2859.46642750007	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6760607	6360818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6760513
m54284U_201201_044215/70124151/ccs	chr15	+	1106	7	NIC	ENSMUSG00000023033.15	novel	7120	27	NA	NA	0	128	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	22.1560124771785	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATAAAAAAAGC	6969	False	NA	NA	False	NA	NA	NA	100768825	100857797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_100768950_100834151_100834482_100853290_100853410_100854909_100855000_100855341_100855471_100857220_100857313_100857575
m54284U_201201_044215/70124890/ccs	chr6	+	5062	24	NNC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	86.0431157581836	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1976	False	NA	28	True	AATAAA	-30	NA	65019841	65093045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_65020089_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
m54284U_201201_044215/70125253/ccs	chr19	+	243	1	Intergenic	novelGene_9299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGGTGCCATCAACGC	1926	False	NA	NA	False	NA	NA	NA	45651903	45652146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45651900_45652100
m54284U_201201_044215/70190987/ccs	chr9	-	4659	25	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	159	junction_4	113.4790423627	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7183	False	NA	-3	True	AATAAA	-20	NA	22300484	22243307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
m54284U_201201_044215/70256814/ccs	chr4	+	796	2	NIC	ENSMUSG00000050212.5	novel	1689	3	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	7073	False	NA	20	True	AATGAA	-15	NA	126042267	126043667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126042425_126043028
m54284U_201201_044215/70257197/ccs	chr9	+	5185	26	NIC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	9.17387595294377	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297499	31332629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
m54284U_201201_044215/70320763/ccs	chr4	-	2508	11	NIC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_8	206.167019670945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCAGCTTCCAGTTCTTA	20	True	NA	NA	False	AATAAA	-29	NA	48279558	48193322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48241295_48241336_48243476_48243550_48279383
m54284U_201201_044215/70322555/ccs	chr7	+	2632	8	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	44.7788215247215	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGGACTTTCAAGGT	NA	False	NA	53	True	AATAAA	-24	NA	67925742	68012835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67999981_68000165_68003356_68003492_68007932_68008037_68010989
m54284U_201201_044215/70388502/ccs	chr1	-	901	6	NIC	ENSMUSG00000062580.10	novel	7280	6	NA	NA	-37	270	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	1060.76964511622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCTTTGAAAGTTAGA	NA	False	NA	-17	True	AATAAA	-18	NA	135241466	135229283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237504_135237609_135241431
m54284U_201201_044215/70517661/ccs	chr9	-	3223	18	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_13	148.035462879326	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043149	31000697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
m54284U_201201_044215/70582752/ccs	chr5	+	1336	9	NIC	ENSMUSG00000025858.13	novel	2107	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	131	junction_2	357.02973878236	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTCTCTGCTTCCTTG	NA	False	NA	NA	False	AATAAA	-31	NA	139238124	139255084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139238375_139248235_139248315_139248627_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
m54284U_201201_044215/70647863/ccs	chr10	+	214	1	Intergenic	novelGene_5170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCCTGACATTTTCCTG	NA	False	NA	NA	False	AATAGA	-16	NA	3940611	3940825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_3940600_3940800
m54284U_201201_044215/70650609/ccs	chr1	-	3095	13	NNC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	42.22426895624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6055	False	NA	NA	False	AATAAA	-18	NA	53336174	53228345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255345_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
m54284U_201201_044215/70715861/ccs	chr4	+	2260	12	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	56	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_6	303.907880779686	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGGCTGTCATTCTG	4637	False	NA	24	True	AATAAA	-29	NA	155896957	155908816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903010_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
m54284U_201201_044215/70781252/ccs	chr12	-	4647	16	NIC	ENSMUSG00000041846.16	novel	4083	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_5	206.879825556341	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8772	False	NA	-24	True	AATAAA	-25	NA	101049961	101005770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
m54284U_201201_044215/7078165/ccs	chr17	+	7338	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	71.4884853524067	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
m54284U_201201_044215/7079016/ccs	chr18	-	201	1	Intergenic	novelGene_9005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAGATGGTAGGATC	NA	False	NA	NA	False	NA	NA	NA	67958339	67958138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_67958100_67958300
m54284U_201201_044215/7080188/ccs	chr2	-	4041	14	NNC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	41.2755210633767	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315744	155232584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260912_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155315559
m54284U_201201_044215/70845654/ccs	chr7	+	2844	20	NNC	ENSMUSG00000055116.9	novel	2908	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	18.7486656958292	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTGTTCCCAATTGATAA	3808	False	NA	NA	False	AATAAA	-20	NA	112806732	112913333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898396_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
m54284U_201201_044215/70910582/ccs	chrX	+	2067	8	NNC	ENSMUSG00000031432.4	novel	1965	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	912.790809125776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGTGTACTGTCATA	NA	False	NA	27	True	AATAAA	-19	NA	139357361	139376889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_139357613_139361130_139361233_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
m54284U_201201_044215/70912168/ccs	chr7	-	236	1	Intergenic	novelGene_3919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGGAGCTGGGGACTG	NA	False	NA	NA	False	AATAAA	-35	NA	80044394	80044158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_80044200_80044400
m54284U_201201_044215/71041102/ccs	chr2	-	167	1	Intergenic	novelGene_1169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGGATTTATATTTTCT	NA	False	NA	NA	False	NA	NA	NA	155870194	155870027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_155870000_155870200
m54284U_201201_044215/71042160/ccs	chrX	-	3497	23	NNC	ENSMUSG00000040586.9	novel	4453	23	NA	NA	0	-903	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	34.2176130278299	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTATTTTTTTAACA	NA	False	NA	NA	False	ATTAAA	-14	NA	165223700	165173931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191637_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
m54284U_201201_044215/71042998/ccs	chr16	-	7656	4	NIC	ENSMUSG00000048490.15	novel	4529	4	NA	NA	0	-332	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	8.73053390247253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAAATGGCTTCTTTTTT	NA	False	NA	-4	True	AATAAA	-22	NA	76169937	76084619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_76091904_76127633_76127753_76149359_76149435_76169759
m54284U_201201_044215/71173383/ccs	chr1	+	4426	11	NNC	ENSMUSG00000026349.15	novel	4511	10	NA	NA	0	-172	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	182.04296196228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTCATTGGTGCTAA	NA	False	NA	3	True	AATAAA	-12	NA	127701900	127733497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725369_127725457_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
m54284U_201201_044215/71237826/ccs	chr10	+	176	1	Intergenic	novelGene_5497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATAATGAAATAAAGGATA	NA	False	NA	NA	False	NA	NA	NA	90814849	90815025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_90814800_90815000
m54284U_201201_044215/71303312/ccs	chr5	+	3447	19	NIC	ENSMUSG00000029439.15	novel	3313	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_15	22.5492602052145	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGGCTCTCCTTCTTC	NA	False	NA	16	True	AATAAA	-29	NA	129578303	129648448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129636532_129636686_129637743_129637870_129646704_129646879_129647539_129647613_129648065
m54284U_201201_044215/71304236/ccs	chr15	+	178	1	Intergenic	novelGene_7766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAGTAGGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	75804172	75804350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_75804200_75804400
m54284U_201201_044215/71304418/ccs	chr1	+	188	1	Intergenic	novelGene_254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGTAATTCCGAAGCC	NA	False	NA	NA	False	NA	NA	NA	93667176	93667364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_93667200_93667400
m54284U_201201_044215/71370469/ccs	chr12	-	6455	29	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-141	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_19	35.6787501783024	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAACTCTTTGGAACTA	4269	False	NA	-41	True	AATAAA	-14	NA	104718352	104657701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
m54284U_201201_044215/71371363/ccs	chr5	+	3129	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_5	92.7086235950512	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7191	False	NA	16	True	AATAAA	-17	NA	31609823	31639098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
m54284U_201201_044215/71436863/ccs	chr4	-	1217	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	402.382192164898	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_148701302_148702022_148702163_148703103_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
m54284U_201201_044215/71501655/ccs	chr5	+	194	1	Intergenic	novelGene_2820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTCTCAAAATTGCAT	9904	False	NA	NA	False	NA	NA	NA	117427602	117427796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_117427600_117427800
m54284U_201201_044215/71502179/ccs	chr2	+	2654	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	-3914	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	238.451078141129	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172387598	172400539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_172387708_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399010
m54284U_201201_044215/71568074/ccs	chrX	+	2654	16	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	815.250756243474	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139691	74153383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_74139734_74140238_74140321_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
m54284U_201201_044215/71632229/ccs	chr4	-	1020	8	NIC	ENSMUSG00000050323.15	novel	1082	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	146.340531024075	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	-19	True	NA	-8	True	NA	NA	NA	11076204	11051049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11070199_11070323_11073143_11073244_11075979
m54284U_201201_044215/71696971/ccs	chr11	+	5589	24	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	71.9184320571939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540320	74561673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
m54284U_201201_044215/71697329/ccs	chr17	-	2909	7	NNC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	339	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	176.43884681857	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46341943	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46341406
m54284U_201201_044215/71698185/ccs	chr2	+	3718	13	NNC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_11	102.019061399764	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3998	False	NA	33	True	ATTAAA	-21	NA	25222773	25242224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239466_25239595_25240373
m54284U_201201_044215/71761953/ccs	chrX	+	175	1	Intergenic	novelGene_9494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGTTAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	72368361	72368536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_72368400_72368500
m54284U_201201_044215/71762059/ccs	chr17	+	3974	21	NIC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	105.110703546309	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCACCCACTTTGTTTC	NA	False	NA	17	True	AATAAA	-27	NA	66090224	66148851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136865_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
m54284U_201201_044215/71762640/ccs	chr2	+	1698	10	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_3	39.9749921826134	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATGTGTCTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	179712384	179727693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_179712409_179713586_179713680_179714932_179715027_179719796_179719936_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
m54284U_201201_044215/71763109/ccs	chr10	-	1976	15	NNC	ENSMUSG00000020226.10	novel	3202	15	NA	NA	-4504	-1128	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	4.04817923294422	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGACCGGGAAATGTTT	NA	False	NA	NA	False	TATAAA	-20	NA	75951299	75894455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_75894734_75896182_75896289_75898047_75898264_75899787_75899957_75906337_75906489_75908261_75908370_75910813_75910950_75917149_75917371_75925739_75925821_75926512_75926619_75939657_75939763_75942540_75942601_75944331_75944437_75945851_75945924_75951237
m54284U_201201_044215/71763787/ccs	chr1	+	184	1	Intergenic	novelGene_106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAACTAAAATTGATCT	4707	False	NA	NA	False	NA	NA	NA	44124802	44124986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_44124800_44125000
m54284U_201201_044215/71829853/ccs	chr14	+	4277	11	NNC	ENSMUSG00000053205.10	novel	1730	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_3	78.8901134490248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGCAATGATTGAGAAG	NA	False	NA	-5	True	ATTAAA	-16	NA	45588678	45614340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_45588987_45592402_45592436_45594169_45594280_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
m54284U_201201_044215/71893176/ccs	chr3	-	2526	1	Intergenic	novelGene_1350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAATCCCTAACACTAT	NA	False	NA	NA	False	NA	NA	NA	10445319	10442793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_10442800_10445300
m54284U_201201_044215/71960322/ccs	chr3	+	3090	8	NIC	ENSMUSG00000028138.9	novel	1604	9	NA	NA	0	70	intron_retention	FALSE	canonical	3	1845	junction_1	144.401650733965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTGTGAGTTGAA	4943	False	NA	14	True	AATAAA	-11	NA	138148872	138161074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_138148955_138151050_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
m54284U_201201_044215/72025839/ccs	chr2	-	4468	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.691674028171	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740936	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165740835
m54284U_201201_044215/72026366/ccs	chr13	-	176	1	Intergenic	novelGene_7225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAATAAAATAACA	NA	False	NA	NA	False	NA	NA	NA	82545278	82545102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_82545100_82545300
m54284U_201201_044215/72090432/ccs	chr7	+	3497	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	3307	junction_7	409.463698891683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758078	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201201_044215/720940/ccs	chr13	-	192	1	Intergenic	novelGene_7071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACTAACAGGTCACCCT	NA	False	NA	NA	False	NA	NA	NA	51862574	51862382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_51862400_51862600
m54284U_201201_044215/721509/ccs	chr4	-	3686	6	NIC	ENSMUSG00000028416.14	novel	1348	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1859	junction_3	164.081199410536	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTGGCTCTGTGGTGG	15	False	40948309	-9	True	AAAAAG	-37	NA	40948294	40936400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_40936677_40937131_40937195_40939076_40941639_40943624_40943708_40946168_40946298_40947721
m54284U_201201_044215/72155405/ccs	chr14	-	4642	10	NIC	ENSMUSG00000063410.9	novel	2676	11	NA	NA	0	2156	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	92.4062421065099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTCGTGTTGTGGG	7436	False	NA	-8	True	AATAAA	-17	NA	121616613	121521598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121574833_121575065_121616309
m54284U_201201_044215/722008/ccs	chr17	-	1299	4	NNC	ENSMUSG00000024007.16	novel	1462	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	714.950969569864	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTGTGGTCTAGTAT	9689	False	NA	-28	True	AATAAA	-19	NA	29483160	29469805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_29470700_29471223_29471293_29480710_29480866_29482979
m54284U_201201_044215/72220815/ccs	chr17	+	1801	6	NNC	ENSMUSG00000036036.16	novel	1749	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1431.58270456163	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_37313670_37314177_37314208_37315365_37315447_37315688_37315796_37316941_37317087_37320310
m54284U_201201_044215/72222015/ccs	chr5	+	1203	1	NIC	ENSMUSG00000029725.11	novel	956	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACCGAACTGTTCTT	NA	False	NA	1	True	AATAAA	-14	NA	137777165	137778368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_137777200_137778400
m54284U_201201_044215/72222967/ccs	chr3	-	2636	9	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	132.051067299738	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTGCATCATGGCTT	NA	False	NA	-16	True	AATAAA	-16	NA	127631160	127600660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127616232_127616260_127616913_127616963_127630797
m54284U_201201_044215/72223458/ccs	chr18	+	210	1	Intergenic	novelGene_8799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAAGGCCATCCTCAG	NA	False	NA	NA	False	NA	NA	NA	5951486	5951696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_5951500_5951700
m54284U_201201_044215/72286537/ccs	chr2	-	178	1	Intergenic	novelGene_1081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGATTCTACCTT	NA	False	NA	NA	False	NA	NA	NA	132131034	132130856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_132130900_132131000
m54284U_201201_044215/72288689/ccs	chr19	+	6049	6	NIC	ENSMUSG00000025019.18	novel	4833	8	NA	NA	0	790	intron_retention	FALSE	canonical	1	3	junction_5	36.9918910032996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGAGTGACTCTTGTT	NA	False	NA	5	True	NA	NA	NA	41471075	41575765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41570216
m54284U_201201_044215/72288822/ccs	chr19	+	4316	24	NIC	ENSMUSG00000071650.7	novel	3860	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	261	junction_5	214.904119826346	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1893	False	NA	-56	True	GATAAA	-42	NA	8875464	8894036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
m54284U_201201_044215/72353105/ccs	chr18	-	190	1	Intergenic	novelGene_8976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTACTTTGATAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	61670746	61670556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_61670600_61670700
m54284U_201201_044215/72353368/ccs	chr10	+	3628	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	29.462821508465	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	1778	False	NA	8	True	AATAAA	-20	NA	45453924	45588367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
m54284U_201201_044215/72353379/ccs	chr4	-	3530	17	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_12	358.141360882822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
m54284U_201201_044215/72353428/ccs	chr5	+	196	1	Intergenic	novelGene_2658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTCCAAGATTCCCATG	NA	False	NA	NA	False	NA	NA	NA	92060811	92061007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92060800_92061000
m54284U_201201_044215/72354514/ccs	chr2	-	185	1	Intergenic	novelGene_851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATAAAATGCACAA	NA	False	NA	NA	False	NA	NA	NA	71629491	71629306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_71629300_71629500
m54284U_201201_044215/72417570/ccs	chr2	+	4204	5	NIC	ENSMUSG00000094786.2	novel	701	4	NA	NA	0	2548	intron_retention	FALSE	canonical	3	153	junction_2	35.4436171968946	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190007	177204104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_177190111_177193535_177193591_177198701_177198829_177199035_177199097_177200246
m54284U_201201_044215/72417924/ccs	chr7	+	2674	4	Intergenic	novelGene_3818	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	80.425258608364	55	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATTTTTAAGTCATCAA	NA	False	NA	NA	False	NA	NA	NA	42903175	42915080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_42903292_42910109_42910237_42910431_42910493_42912710
m54284U_201201_044215/72419789/ccs	chr13	+	3321	11	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	277.023031533481	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	54225887	54262361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_54226490_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
m54284U_201201_044215/72551147/ccs	chr15	-	202	1	Intergenic	novelGene_7809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAAGGTTCAACCGA	NA	False	NA	NA	False	NA	NA	NA	79214269	79214067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_79214100_79214300
m54284U_201201_044215/72746961/ccs	chr7	+	4642	38	NIC	ENSMUSG00000039187.17	novel	4645	38	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_31	65.5515454678326	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTTTTGAAAAT	NA	False	NA	12	True	AATAAA	-13	NA	79042059	79100012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094425_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
m54284U_201201_044215/72747157/ccs	chr10	+	1363	6	NIC	ENSMUSG00000023175.16	novel	1261	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6175	junction_4	469.983233743503	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCACTACTTGAA	NA	False	NA	21	True	AATAAA	-15	NA	79540341	79547803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79540419_79545504_79545662_79545891_79546237_79546471_79546755_79547089_79547115_79547327
m54284U_201201_044215/7274827/ccs	chr6	-	1110	5	ISM	ENSMUSG00000030345.17	ENSMUST00000078521.7	2252	15	36402	0	-53	0	3prime_fragment	FALSE	canonical	2	4	junction_4	3.57071421427143	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGGCTGTCAATCTATG	NA	False	NA	-12	True	AATAAA	-17	NA	126862400	126852982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_126853514_126854122_126854302_126857187_126857318_126860989_126861051_126862191
m54284U_201201_044215/7274947/ccs	chr2	+	4441	13	NIC	ENSMUSG00000005506.17	novel	7851	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	224.163305427093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90846910
m54284U_201201_044215/7275036/ccs	chr18	+	2537	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_8	60.669605408377	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCTCTCAATAGTCTC	NA	False	NA	17	True	AATAAA	-20	NA	74349299	74354567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352322_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
m54284U_201201_044215/7275196/ccs	chr16	+	189	1	Intergenic	novelGene_8059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGGCTGGTGAGATGG	2713	False	NA	NA	False	NA	NA	NA	11080591	11080780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_11080600_11080800
m54284U_201201_044215/7276237/ccs	chr2	-	4486	23	NIC	ENSMUSG00000035392.18	novel	4342	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	20.1983961395842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACCGTTTAAGAAAACAT	NA	False	NA	1	True	AATAAA	-18	NA	38177402	37689002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_37691263_37692026_37692286_37695083_37695213_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
m54284U_201201_044215/7276918/ccs	chr8	-	1111	6	NIC	ENSMUSG00000031954.7	novel	1178	7	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	772.979016532791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTGGTGAGAGTAA	NA	False	NA	-23	True	AATAAA	-15	NA	112580976	112495122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_112495420_112505882_112506042_112566989_112567118_112568414_112568623_112571725_112571844_112580775
m54284U_201201_044215/72810924/ccs	chr7	+	3412	22	NNC	ENSMUSG00000030880.15	novel	4194	21	NA	NA	0	0	intron_retention	TRUE	canonical	3	12	junction_21	74.6876488983231	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCAGAATGTGGTA	NA	False	NA	NA	False	NA	NA	NA	120517006	120546655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698_120545553_120546334
m54284U_201201_044215/72812518/ccs	chrX	+	2036	9	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	223.785018209441	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGGCTTCGTGTCACT	NA	False	NA	14	True	AATAAA	-19	NA	73340748	73348295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73340928_73341228_73341356_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
m54284U_201201_044215/72876819/ccs	chr2	-	5247	27	NIC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	0	1394	combination_of_known_junctions	FALSE	canonical	3	7	junction_24	181.343767828336	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081296	53026855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53078459_53078540_53079980_53080113_53081160
m54284U_201201_044215/72944317/ccs	chr14	-	175	1	Intergenic	novelGene_7578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATAAAAAGAAGAATTTT	NA	False	NA	NA	False	NA	NA	NA	99456643	99456468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_99456500_99456600
m54284U_201201_044215/73007333/ccs	chr14	+	2669	16	NIC	ENSMUSG00000025544.14	novel	3107	17	NA	NA	0	-270	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	270.049295911362	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTATCACTCCCTGCA	NA	False	NA	32	True	AATAAA	-17	NA	122344549	122396746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_122344848_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
m54284U_201201_044215/73008226/ccs	chr9	+	2044	11	NIC	ENSMUSG00000010048.11	novel	2056	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	631	junction_10	36.7456119829293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCTTTATCCTGAGTC	NA	False	NA	21	True	ATTAAA	-33	NA	107464924	107470237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469571_107469673
m54284U_201201_044215/73073592/ccs	chr7	+	1320	12	NIC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	0	-412	combination_of_known_junctions	FALSE	canonical	3	26	junction_3	1404.19735021368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039384	137069911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_137039501_137046707_137046817_137054181_137054271_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
m54284U_201201_044215/73073686/ccs	chr12	+	2092	11	NIC	ENSMUSG00000020572.9	novel	411	4	NA	NA	0	-2252	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	257.16743573011	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTGTTTGTGGTGTTGT	NA	False	NA	11	True	AATAAA	-14	NA	32870799	32901096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_32870909_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
m54284U_201201_044215/73138655/ccs	chr17	+	1959	13	NIC	ENSMUSG00000019487.12	novel	2016	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	117.379962325584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTGGAGTCTGCACCGC	NA	False	NA	13	True	ATTAAA	-23	NA	57556454	57570427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_57556572_57557741_57557858_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
m54284U_201201_044215/73140864/ccs	chr11	+	395	2	NIC	ENSMUSG00000036860.15	novel	718	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGTCATTGTCTTCTT	NA	False	NA	9	True	NA	NA	NA	59093330	59096714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_59093486_59096474
m54284U_201201_044215/73141083/ccs	chr19	+	1879	12	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_8	134.380796050282	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTTCTCTGTGCCTCG	4129	False	NA	18	True	AATAAA	-24	NA	41921918	41932543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41928295_41928344_41929088_41929175_41929954_41930079_41930374_41930446_41932020
m54284U_201201_044215/73204927/ccs	chr13	+	3273	26	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	220.622515623406	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598194	6630078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_6598266_6599615_6599719_6602669_6602777_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
m54284U_201201_044215/73206184/ccs	chr6	+	3179	24	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	90	junction_1	54.4319696453353	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	124	False	NA	NA	False	AATAAA	-22	NA	49372488	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
m54284U_201201_044215/73206237/ccs	chr2	+	1908	14	NIC	ENSMUSG00000017760.17	novel	3646	16	NA	NA	0	-435	intron_retention	FALSE	canonical	3	800	junction_1	81.5756809102831	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTCTTCTCTGTGGCA	NA	False	NA	18	True	ATTAAA	-18	NA	164675726	164681504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_164675771_164675949_164676129_164676239_164676352_164676617_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
m54284U_201201_044215/73269619/ccs	chr15	+	4488	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	0	-234	combination_of_known_junctions	FALSE	canonical	1	10	junction_1	163.420573829054	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	68	False	NA	18	True	AATAAA	-18	NA	12117944	12185535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12118034_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
m54284U_201201_044215/73269856/ccs	chr7	+	5300	16	NNC	ENSMUSG00000030671.10	novel	6573	16	NA	NA	-100	-1322	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	17.7531217912043	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTATTGAACTTGCGT	NA	False	NA	1	True	AATAAA	-11	NA	114014415	114137164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097236_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
m54284U_201201_044215/73270274/ccs	chr14	-	4257	23	NNC	ENSMUSG00000034893.10	novel	4268	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	22.2812599611096	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGCCACGTGTTTGTT	NA	False	NA	NA	False	AATAAA	-38	NA	75991998	75939789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979916_75981005_75981068_75984492_75984640_75991704
m54284U_201201_044215/73336726/ccs	chr7	+	2975	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	860	junction_1	75.4623250370673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201201_044215/73402225/ccs	chr12	-	2437	4	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7560	junction_2	376.74070068889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111636449_111636595_111638408_111638663
m54284U_201201_044215/7342542/ccs	chr8	+	3497	10	NIC	ENSMUSG00000002948.20	novel	1578	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	277	junction_9	23.6366528515501	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288828	4297897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294776_4294860_4295004_4295542_4295589_4295694
m54284U_201201_044215/7342663/ccs	chr4	-	1805	2	NNC	ENSMUSG00000042367.13	novel	1623	2	NA	NA	632	0	at_least_one_novel_splicesite	FALSE	canonical	3	106	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGTTCTTCCCTCCATTC	NA	False	NA	-5	True	AATAAA	-17	NA	127224005	127219027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_127220565_127223737
m54284U_201201_044215/73466042/ccs	chr9	-	2674	13	ISM	ENSMUSG00000041268.18	ENSMUST00000144736.8	2958	16	-55	22158	0	0	5prime_fragment	FALSE	canonical	3	29	junction_1	10.0950345329881	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGTGGTTGGTAGTTG	6932	False	NA	NA	False	AATAAA	-18	NA	54408910	54352614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
m54284U_201201_044215/73468582/ccs	chr9	+	4900	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_23	42.7501391163078	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26942025	27006611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983089_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
m54284U_201201_044215/73468712/ccs	chr11	-	3879	12	NIC	ENSMUSG00000020530.15	novel	2528	13	NA	NA	0	-221	intron_retention	FALSE	canonical	3	268	junction_6	81.9556421042949	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAGAATGTGGTGTACAT	NA	False	NA	-6	True	AATAAA	-20	NA	84761028	84723407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702
m54284U_201201_044215/73531534/ccs	chr7	-	3456	11	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	5267	692	5267	0	3prime_fragment	FALSE	canonical	3	21	junction_9	9.28224110869784	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCCTGTCCCCTGGCCC	NA	False	NA	-3	True	TATAAA	-17	NA	44697038	44677678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262
m54284U_201201_044215/73598002/ccs	chr10	-	1017	6	NNC	ENSMUSG00000033318.8	novel	1370	5	NA	NA	-702	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	16.6805275695944	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTTTTTTTCTTTTTT	NA	False	NA	-4	True	AATAAA	-21	NA	75671417	75667678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008_75670242_75671296
m54284U_201201_044215/73598924/ccs	chr6	-	2596	11	NNC	ENSMUSG00000038648.6	novel	7082	12	NA	NA	-40959	3170	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	25.5556256037687	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTCCTCTTTCATACAA	8013	False	NA	NA	False	ATTAAA	-25	NA	37354429	37308056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37354383
m54284U_201201_044215/73663217/ccs	chr8	+	1345	9	NNC	ENSMUSG00000079033.11	novel	1342	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	86.0693760869684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8589	False	NA	5	True	NA	NA	NA	70605427	70620138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70605495_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619712
m54284U_201201_044215/73663925/ccs	chr8	+	197	1	Intergenic	novelGene_4396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATCTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	88914064	88914261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_88914100_88914300
m54284U_201201_044215/73663964/ccs	chr4	+	1896	11	NIC	ENSMUSG00000063524.14	novel	2027	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2891	junction_8	4026.82793771971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGTGCTGGGCATCTCA	NA	False	NA	-1	True	AATAAA	-16	NA	150321699	150333330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
m54284U_201201_044215/73664734/ccs	chr6	-	2529	13	NIC	ENSMUSG00000030254.17	novel	2577	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	58.64790182853	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTGAGTATTTGAAT	NA	False	NA	-79	True	AATGAA	-29	NA	112673631	112596905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
m54284U_201201_044215/73728826/ccs	chr2	-	6736	35	NNC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	145.923606595841	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213575	60122446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152134_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
m54284U_201201_044215/73729872/ccs	chr9	-	724	3	NIC	ENSMUSG00000079427.11	novel	725	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	156	junction_2	185.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	88601623	88570658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_88571039_88597540_88597803_88601541
m54284U_201201_044215/73730803/ccs	chr3	-	2748	12	NIC	ENSMUSG00000027956.12	novel	2898	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	3.82466981235684	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTCTTCTTTAGATA	NA	False	NA	NA	False	AATAAA	-17	NA	79750219	79719870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79750077
m54284U_201201_044215/73795304/ccs	chr11	+	1557	5	NIC	ENSMUSG00000020849.14	novel	2100	6	NA	NA	0	-299	combination_of_known_splicesites	FALSE	canonical	3	611	junction_1	3883.94258453958	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACAAACCTAAATT	3035	False	NA	-16	True	NA	NA	NA	75623738	75656372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_75623918_75646399_75646507_75647642_75647850_75650117_75650255_75655445
m54284U_201201_044215/73990591/ccs	chr1	+	176	1	Intergenic	novelGene_194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAACAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	74997209	74997385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74997200_74997400
m54284U_201201_044215/73990736/ccs	chr11	+	232	1	Intergenic	novelGene_5714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATCACCAGAGATGGA	NA	False	NA	NA	False	NA	NA	NA	20020783	20021015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_20020800_20021000
m54284U_201201_044215/73991762/ccs	chr3	+	4319	15	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_4	74.0165797752953	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101639	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152265_152152327_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
m54284U_201201_044215/74055922/ccs	chr14	+	3506	26	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	349	junction_12	57.9852946875326	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640153	56726892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56661914_56662027_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
m54284U_201201_044215/74057416/ccs	chr11	+	3407	18	NNC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_16	36.7383905820676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616187	23682876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678935_23679075_23681320
m54284U_201201_044215/7406123/ccs	chr2	+	1495	8	NIC	ENSMUSG00000039069.20	novel	1730	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	74.3955232359516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATGTGTCTGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	179712384	179727693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_179712409_179713586_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726106_179726243_179726383_179727172
m54284U_201201_044215/7406811/ccs	chr19	-	4470	19	NIC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_14	43.1588009421651	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATTATTTTCTAATT	NA	False	NA	-16	True	ATTAAA	-15	NA	14575415	14425513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495338_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
m54284U_201201_044215/7406962/ccs	chr1	-	202	2	Antisense	novelGene_ENSMUSG00000102839.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTACTCCCTGTCTGCCC	NA	False	NA	NA	False	NA	NA	NA	34398705	34068803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_34068955_34398654
m54284U_201201_044215/7407202/ccs	chr4	+	2051	6	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3072	junction_5	123.408913778544	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCATTTTTGTTCCTA	8716	False	NA	28	True	AATACA	-36	NA	148675959	148679076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_148676244_148676500_148676622_148676938_148677899_148678224_148678455_148678539_148678663_148678743
m54284U_201201_044215/74122243/ccs	chr11	+	2141	10	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-4334	combination_of_known_splicesites	FALSE	canonical	2	63	junction_1	2304.98888886211	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCAAAGTATGTGGGG	NA	False	NA	31	True	AATAAA	-18	NA	55360543	55391330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
m54284U_201201_044215/74122838/ccs	chr11	-	2804	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_1	56.1624559050546	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTCTGTGTTTTTTA	NA	False	NA	NA	False	AATAAA	-41	NA	98084102	98042980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
m54284U_201201_044215/74123448/ccs	chr2	-	177	1	Intergenic	novelGene_1201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTTAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	160516765	160516588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_160516600_160516800
m54284U_201201_044215/74188004/ccs	chr12	+	7139	7	NNC	ENSMUSG00000035133.10	novel	5197	6	NA	NA	-232	824	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	114.79547029391	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTGACTTGTGTTTGT	NA	False	NA	14	True	ATTAAA	-23	NA	52550522	52616442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_52550660_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
m54284U_201201_044215/74252730/ccs	chr7	-	186	1	Intergenic	novelGene_3712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACTAAAAAAGAAAATTAGT	6358	False	NA	NA	False	NA	NA	NA	25126125	25125939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_25125900_25126100
m54284U_201201_044215/74253779/ccs	chr1	+	3247	15	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	0	-159	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_7	340.474818512054	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220259	151240007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230445_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
m54284U_201201_044215/74254490/ccs	chr9	+	1986	8	NNC	ENSMUSG00000038957.14	novel	5708	7	NA	NA	0	-1243	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	86.0609655762609	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCTTCCTAGAGTGAA	NA	False	NA	13	True	AATAAA	-23	NA	57615849	57657443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443_57655716_57657071
m54284U_201201_044215/74318418/ccs	chr8	-	3160	27	NIC	ENSMUSG00000070000.14	novel	3351	27	NA	NA	0	0	intron_retention	FALSE	non_canonical	2	21	junction_16	33.8988226567648	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178348	72161296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_72161476_72161569_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72166679_72166915_72166941_72167343_72167417_72167522_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
m54284U_201201_044215/74318741/ccs	chr6	-	196	1	Intergenic	novelGene_3332	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACTGACTCTCCTTCCC	2029	False	NA	NA	False	NA	NA	NA	72883398	72883202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_72883200_72883400
m54284U_201201_044215/74320604/ccs	chr1	+	215	1	Intergenic	novelGene_112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACAATCAGGTTACCT	NA	False	NA	NA	False	NA	NA	NA	46825083	46825298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_46825100_46825300
m54284U_201201_044215/74384505/ccs	chr1	+	9446	42	NIC	ENSMUSG00000025949.17	novel	6641	42	NA	NA	0	-1890	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	16.2957131693522	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGATCTCTTTGAGGA	NA	False	NA	30	True	AATAAA	-40	NA	65225841	65315964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_65225938_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320_65263489_65269952_65270013_65272888_65273019_65273412_65273594_65274168_65274244_65277593_65277702_65283554_65283696_65284868_65284996_65285220_65286378_65289344_65289446_65290763_65290836_65291570_65291743_65292510_65292690_65294200_65294315_65294680_65294790_65295097_65295253_65295706_65295798_65297067_65297129_65297941_65298080_65299157_65299279_65302038_65302135_65303505_65303590_65304407_65304506_65304920_65305086_65306984_65307045_65307856_65308034_65309031_65309136_65310426_65310556_65311605_65311868_65312191_65312267_65312801
m54284U_201201_044215/74449425/ccs	chr9	+	2264	12	NNC	ENSMUSG00000032342.14	novel	2366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_9	20.7332527258759	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTAGGTGATTTTACG	NA	False	NA	19	True	AATAAA	-18	NA	78355494	78381434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368877_78372165_78372285_78377912_78378074_78381071
m54284U_201201_044215/74450508/ccs	chr19	-	1674	4	NIC	ENSMUSG00000057506.6	novel	885	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1199	junction_3	40.0860186210715	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACAAATGTGGGT	966	False	NA	NA	False	ATTAAA	-5	NA	44134882	44127697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_44128153_44130562_44131580_44134379_44134497_44134797
m54284U_201201_044215/74451402/ccs	chr10	-	2609	8	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	-199	-208	combination_of_known_junctions	FALSE	canonical	3	60	junction_7	291.808505841815	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCATGGTCTTCTGCAT	NA	False	NA	-37	True	NA	NA	NA	82599696	82584742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599292
m54284U_201201_044215/74514921/ccs	chr17	-	183	1	Intergenic	novelGene_8681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACAAACAAACAAACTCT	NA	False	NA	NA	False	NA	NA	NA	66252128	66251945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66251900_66252100
m54284U_201201_044215/74580547/ccs	chr19	-	2498	12	ISM	ENSMUSG00000037578.5	ENSMUST00000042026.5	3321	15	35314	1	35314	0	3prime_fragment	FALSE	canonical	3	31	junction_9	12.7694107632134	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTTTGCATTTCCTTCT	873	False	NA	-2	True	AATAAA	-16	NA	44145567	44136076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_-_44136988_44137591_44137716_44137967_44138087_44138850_44138969_44140471_44140594_44140802_44140902_44142097_44142219_44142502_44142685_44142862_44143034_44143886_44144116_44144279_44144505_44145490
m54284U_201201_044215/74581663/ccs	chr9	-	3481	8	NIC	ENSMUSG00000032218.8	novel	1531	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1324	junction_2	72.3181745299682	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGTATCCTGTGTATAT	NA	False	NA	-8	True	AATAAA	-14	NA	70328829	70314973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
m54284U_201201_044215/74582688/ccs	chr10	-	176	1	Intergenic	novelGene_5208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	18257611	18257435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_18257400_18257600
m54284U_201201_044215/7471228/ccs	chr4	+	5859	30	NNC	ENSMUSG00000034610.15	novel	6054	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_25	25.401508283324	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317206	108416612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406425_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
m54284U_201201_044215/7471412/ccs	chr8	-	1546	11	ISM	ENSMUSG00000038000.11	ENSMUST00000211870.2	2722	12	-17	2297	0	0	5prime_fragment	FALSE	canonical	3	32	junction_7	55.0807588909231	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGAGAGATTCAGGGG	NA	False	NA	-12	True	AATAAA	-17	NA	106427734	106424788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426793_106426913_106426991_106427078_106427173_106427334_106427472_106427551
m54284U_201201_044215/7472434/ccs	chr12	-	2761	13	NIC	ENSMUSG00000001729.15	novel	2690	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	224	junction_12	44.0734866129539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTTGCTTTCTGGTGTGG	NA	False	NA	0	True	AATAAA	-19	NA	112640710	112620254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
m54284U_201201_044215/7473293/ccs	chr6	+	1729	7	NIC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	3728	junction_3	1002.47367657322	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5871	False	NA	37	True	AATATA	-25	NA	67243993	67261295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_67244394_67248181_67248333_67248870_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
m54284U_201201_044215/7473330/ccs	chr5	+	3304	14	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	25.6563543924319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTGATCAGCTAGCA	NA	False	NA	9	True	AATAAA	-15	NA	112490948	112526280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_112490989_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
m54284U_201201_044215/7473594/ccs	chr15	+	1452	8	NIC	ENSMUSG00000023051.12	novel	1523	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	125.715584408876	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTTCTTTTTTGTTA	NA	False	NA	NA	False	AATAAA	-27	NA	102426861	102432111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102427038_102427556_102427727_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
m54284U_201201_044215/74842144/ccs	chr6	+	233	1	Intergenic	novelGene_3145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTTAGCAGGCCATCAT	NA	False	NA	NA	False	AAAAAG	-37	NA	30037851	30038084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_30037900_30038100
m54284U_201201_044215/74842222/ccs	chr4	-	1591	7	ISM	ENSMUSG00000000409.15	ENSMUST00000167288.8	2074	13	1842	5	-71	0	3prime_fragment	FALSE	canonical	3	108	junction_2	13.2214052035158	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTCTACTGCATACTT	NA	False	NA	0	True	NA	NA	NA	129450323	129442141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080
m54284U_201201_044215/74842509/ccs	chr6	-	4397	27	NNC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_16	124.610398760657	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71609889	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588842_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
m54284U_201201_044215/74908037/ccs	chr17	+	1700	8	NIC	ENSMUSG00000023827.9	novel	1915	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	91.6245667083332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAGTGTTTACACAA	NA	False	NA	28	True	ATTAAA	-19	NA	12338215	12438532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_12338303_12370578_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
m54284U_201201_044215/74908380/ccs	chr4	+	5148	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_1	34.280175536053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTATCTTGTCCTGTT	NA	False	NA	NA	False	AATAAA	-27	NA	109137464	109245014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_109137642_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
m54284U_201201_044215/74973184/ccs	chr13	+	2489	13	NIC	ENSMUSG00000062822.9	novel	2627	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	29.2546292633035	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCATTTCTTACATCA	NA	False	NA	12	True	AATAAA	-22	NA	119599319	119622656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_119599656_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
m54284U_201201_044215/74976070/ccs	chr2	+	7062	13	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	249	junction_5	34.327163685144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942946	128968514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128961117_128964989_128965187_128965630_128965885_128967133
m54284U_201201_044215/75039378/ccs	chr5	-	1541	6	NIC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_5	105.678758508983	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822115	100802588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100821854
m54284U_201201_044215/75039397/ccs	chr2	-	2866	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_5	37.5091655465701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915289	179900332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179904870_179904949_179906006_179906100_179906195_179906268_179914892
m54284U_201201_044215/75104611/ccs	chr11	+	4455	5	NIC	ENSMUSG00000037857.17	novel	5158	4	NA	NA	0	-731	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.022497469319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAAAAACGAGGCTCCA	NA	False	NA	75	True	AATAAA	-34	NA	77576997	77602836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_77577334_77579112_77579158_77582367_77584081_77596334_77596368_77600508
m54284U_201201_044215/75105388/ccs	chr11	-	2589	6	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	75.5115885146114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834965	105824527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_105826394_105827007_105827112_105827380_105827480_105828454_105828667_105830925_105831205_105834936
m54284U_201201_044215/75235724/ccs	chr11	-	192	1	Intergenic	novelGene_6481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATGAGAAATCAAGAGAA	2514	False	NA	NA	False	NA	NA	NA	116772934	116772742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116772700_116772900
m54284U_201201_044215/75238022/ccs	chr1	-	168	1	Intergenic	novelGene_331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTAAAAAAAGTATG	NA	False	NA	NA	False	NA	NA	NA	134495145	134494977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_134495000_134495100
m54284U_201201_044215/75303722/ccs	chr11	+	2232	14	NNC	ENSMUSG00000007850.17	novel	2225	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	133.201631207028	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGTCTGTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-19	NA	50268595	50277355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_50268686_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
m54284U_201201_044215/75366440/ccs	chr9	-	3207	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	142.04829860228	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043149	31000697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015070_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
m54284U_201201_044215/75367004/ccs	chr18	-	229	1	Intergenic	novelGene_8940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTTGCTCGAGCCAGG	NA	False	NA	NA	False	NA	NA	NA	42653728	42653499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_42653500_42653700
m54284U_201201_044215/7536735/ccs	chr16	-	1301	10	NIC	ENSMUSG00000022881.16	novel	1228	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1237	junction_9	143.061758225833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	False	NA	-34	True	AATAAA	-15	NA	22946487	22932700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_22932858_22932936_22933054_22933194_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
m54284U_201201_044215/7537779/ccs	chr7	+	3805	4	NIC	ENSMUSG00000057101.9	novel	3901	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	41.2660743091573	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAACAGATGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	23781348	23807123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_23781664_23797245_23797321_23800872_23800994_23803829
m54284U_201201_044215/7538060/ccs	chr11	+	2187	1	FSM	ENSMUSG00000050288.7	ENSMUST00000057893.7	3663	1	0	1476	0	-1476	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTATTTTTAGGTCGC	NA	False	NA	NA	False	AATAAA	-18	NA	102495221	102497408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_102495200_102497400
m54284U_201201_044215/75433031/ccs	chr2	+	2306	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_6	805.488050811432	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130118951_130119891_130120075_130120211_130120816
m54284U_201201_044215/75433287/ccs	chr13	+	844	7	NNC	ENSMUSG00000021385.11	novel	4421	13	NA	NA	0	-24823	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	51.3173676470473	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTCTGGAAGGGCAGCC	NA	False	NA	NA	False	NA	NA	NA	49574724	49591554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49591351
m54284U_201201_044215/75498543/ccs	chr2	-	3123	6	NIC	ENSMUSG00000085682.3	novel	1691	8	NA	NA	70	0	intron_retention	FALSE	canonical	3	12	junction_5	9.90757286120067	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCATTCTTGACTTT	NA	False	NA	-6	True	AATAAA	-44	NA	166349921	166341960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_166344399_166345246_166345340_166347371_166347507_166347939_166348119_166348706_166348871_166349807
m54284U_201201_044215/75498575/ccs	chr8	+	2556	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	142	junction_8	39.3660704160321	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGAGATCTGGCTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	70735683	70747003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70744079_70744166_70744254_70745624
m54284U_201201_044215/75499404/ccs	chr18	+	1359	8	NNC	ENSMUSG00000024525.8	novel	5054	8	NA	NA	0	1931	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	389.0304536634	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGTCTTCCTCCAG	NA	False	NA	NA	False	AATAAA	-18	NA	67422321	67451910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_67422577_67435245_67435380_67439737_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
m54284U_201201_044215/75499474/ccs	chr18	+	2071	19	NIC	ENSMUSG00000024410.16	novel	2170	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	65.1417258325602	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAATGTTGCTAACTCCC	NA	False	NA	NA	False	AATAAA	-45	NA	12301795	12323054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_12301960_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
m54284U_201201_044215/75563180/ccs	chr7	-	1019	2	Intergenic	novelGene_3731	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAATCTTACCATTTGTTC	7904	False	NA	NA	False	NA	NA	NA	27388688	27387566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_27388097_27388199
m54284U_201201_044215/75563541/ccs	chr8	+	2811	12	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	274.517427828942	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13389147_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201201_044215/75564482/ccs	chr7	+	180	1	Intergenic	novelGene_3642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCAAACAAACTTTTACA	4287	False	NA	NA	False	NA	NA	NA	6956504	6956684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_6956500_6956700
m54284U_201201_044215/75564665/ccs	chr7	+	2037	16	ISM	ENSMUSG00000030589.16	ENSMUST00000159975.8	2296	17	2704	0	2564	0	3prime_fragment	FALSE	non_canonical	0	0	junction_2	17.9245331567907	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGCCAGTCACACTCC	417	False	NA	20	True	AAAAAG	-19	NA	28837061	28851046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_28837151_28838235_28838342_28838467_28838531_28839666_28839799_28839912_28840067_28842390_28842565_28844556_28844674_28845232_28845509_28847791_28847873_28847968_28848074_28848198_28848318_28848411_28848572_28849223_28849261_28849346_28849482_28849603_28849717_28850870
m54284U_201201_044215/75565561/ccs	chr11	-	171	1	ISM	ENSMUSG00000085379.2	ENSMUST00000131221.2	3201	2	11729	403	11729	-403	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTAAAAAAGACAAGCC	NA	False	NA	NA	False	NA	NA	NA	58857147	58856976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_58857000_58857100
m54284U_201201_044215/75629289/ccs	chr17	-	2449	14	NNC	ENSMUSG00000024008.17	novel	5708	21	NA	NA	-5015	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_8	10.3443664455472	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATAGACCCCCCCTCTCC	3109	False	NA	-9	True	AGTAAA	-14	NA	29408092	29376889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_29378215_29378925_29379000_29379292_29379351_29380083_29380187_29380392_29380521_29381226_29381409_29383647_29383695_29385691_29385754_29388378_29388433_29392298_29392375_29395135_29395178_29402896_29403002_29407266_29407371_29408003
m54284U_201201_044215/75694441/ccs	chr5	-	188	1	Intergenic	novelGene_2747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTCCTCACTTTATTCA	NA	False	NA	NA	False	NA	NA	NA	108276789	108276601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108276600_108276800
m54284U_201201_044215/75694685/ccs	chr16	-	196	1	Intergenic	novelGene_8293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAAAAATGAATCTTTA	NA	False	NA	NA	False	NA	NA	NA	64713051	64712855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_64712900_64713100
m54284U_201201_044215/75760230/ccs	chr11	+	5631	25	NIC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	0	0	intron_retention	FALSE	canonical	2	298	junction_19	51.9931719608984	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGGCCCTGCATTTTTA	NA	False	NA	24	True	CATAAA	-17	NA	3599190	3640370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
m54284U_201201_044215/75760483/ccs	chr15	-	2671	11	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_10	159.216487839671	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8019	False	NA	-4	True	AATAAA	-24	NA	79326337	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326292
m54284U_201201_044215/75760881/ccs	chr9	+	2142	8	NIC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	150.498220207796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160446	58169803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_58160561_58162216_58162324_58162816_58163097_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
m54284U_201201_044215/75762300/ccs	chr16	-	3332	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_14	375.81810759994	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866177_4866218_4866613_4866651_4867669
m54284U_201201_044215/75825779/ccs	chr9	+	4643	10	NIC	ENSMUSG00000031993.8	novel	5762	11	NA	NA	-50	-984	combination_of_known_junctions	FALSE	canonical	2	4	junction_8	12.7898493702459	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGTGAAATTGTTTTAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	30338353	30377038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30374515_30374604_30375581
m54284U_201201_044215/75892981/ccs	chr12	-	1820	11	NIC	ENSMUSG00000021036.11	novel	6710	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	171.988517058552	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTATTCTACTTGTGAA	8810	False	NA	-11	True	ATTAAA	-14	NA	87435015	87356412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87434819
m54284U_201201_044215/75958671/ccs	chr4	-	4805	18	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	258	junction_15	36.4699240926246	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
m54284U_201201_044215/75958900/ccs	chr17	-	157	1	Intergenic	novelGene_8589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	9860	False	NA	NA	False	NA	NA	NA	37473388	37473231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_37473200_37473400
m54284U_201201_044215/75959110/ccs	chr15	+	201	1	FSM	ENSMUSG00000116238.2	ENSMUST00000230810.2	3039	1	2629	209	2629	-209	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAAAAGCCGGGCGTG	7198	False	NA	NA	False	NA	NA	NA	76464653	76464854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_76464700_76464900
m54284U_201201_044215/76022472/ccs	chr19	+	2186	15	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	79	junction_2	163.999393353781	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_45352326_45394983_45395026_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
m54284U_201201_044215/7602444/ccs	chrX	+	2397	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	30.440762145518	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618711	133622659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619858_133620375_133620475_133620823
m54284U_201201_044215/7602606/ccs	chr9	-	2029	21	NIC	ENSMUSG00000058444.9	novel	2310	22	NA	NA	188	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_19	18.5973116336744	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGTTTGTCTCAGCAAGT	NA	False	NA	-1	True	AATAAA	-18	NA	63284971	63071049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63279018_63279068_63284404
m54284U_201201_044215/7604857/ccs	chr10	+	191	1	Intergenic	novelGene_5388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAAGAGG	1649	False	NA	NA	False	NA	NA	NA	69897191	69897382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_69897200_69897400
m54284U_201201_044215/7604974/ccs	chr8	-	172	1	Intergenic	novelGene_4438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAATTTTAATCACT	NA	False	NA	NA	False	NA	NA	NA	106117406	106117234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106117200_106117400
m54284U_201201_044215/76087474/ccs	chr1	+	198	1	Intergenic	novelGene_163	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGGACAGCATCAATCT	26	False	NA	NA	False	NA	NA	NA	63273242	63273440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_63273200_63273400
m54284U_201201_044215/76087650/ccs	chr1	-	4272	2	NIC	ENSMUSG00000026667.15	novel	7775	7	NA	NA	1528	-14502	intron_retention	FALSE	canonical	3	116	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTAGTTTCATCTGCTGT	NA	False	NA	NA	False	NA	NA	NA	170040775	170035490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_170038792_170039804
m54284U_201201_044215/76218508/ccs	chr18	-	176	1	Intergenic	novelGene_8923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGTGCTGCTTAC	8287	False	NA	NA	False	NA	NA	NA	38367265	38367089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_38367100_38367300
m54284U_201201_044215/76219454/ccs	chr15	-	2526	10	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_7	355.316586360966	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432145	98416700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429411_98429600_98429780_98431398_98431658_98431782
m54284U_201201_044215/76220430/ccs	chr8	+	3361	21	NNC	ENSMUSG00000031960.15	novel	659	3	NA	NA	-3349	-2092	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	745.342947910558	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111756426	111782204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_111756492_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
m54284U_201201_044215/76286330/ccs	chr17	+	3684	20	NIC	ENSMUSG00000061950.18	novel	664	7	NA	NA	190	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	77.0463399789706	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCACCCACTTTGTTTC	NA	False	NA	17	True	AATAAA	-27	NA	66089964	66148851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_66090015_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
m54284U_201201_044215/76350356/ccs	chr11	-	2019	1	Antisense	novelGene_ENSMUSG00000051832.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	83473161	83471142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_83471100_83473200
m54284U_201201_044215/76415597/ccs	chr4	-	1348	7	NIC	ENSMUSG00000028772.20	novel	2113	8	NA	NA	0	189	combination_of_known_splicesites	FALSE	canonical	3	73	junction_5	86.0503728444373	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCAAAAAGGCTTTATT	NA	False	NA	-17	True	CATAAA	-23	NA	130253736	130209882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130247928_130248050_130253668
m54284U_201201_044215/76415691/ccs	chr12	+	2871	11	NIC	ENSMUSG00000021065.17	novel	2765	12	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	30.4065782356384	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGAAGTTTCTGGAAT	NA	False	NA	13	True	AATAAA	-14	NA	77284829	77522763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_77284974_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
m54284U_201201_044215/76416997/ccs	chr4	-	1236	8	NIC	ENSMUSG00000028692.15	novel	1420	9	NA	NA	64	0	combination_of_known_splicesites	FALSE	canonical	3	54	junction_6	574.994374417911	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTGTGCCTGACTTA	NA	False	NA	-1	True	AATAAA	-15	NA	116508813	116493706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116502700_116502791_116508535
m54284U_201201_044215/76480652/ccs	chr19	-	2945	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	179.745576363432	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218421	7203037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207552_7207649_7211468_7211522_7212427_7212524_7218302
m54284U_201201_044215/76480762/ccs	chr11	-	193	1	Intergenic	novelGene_5762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAGAA	981	False	NA	NA	False	NA	NA	NA	30470899	30470706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_30470700_30470900
m54284U_201201_044215/76481283/ccs	chr14	+	3847	25	NIC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	39	junction_1	253.201336226069	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTGTGTAGAACTTCAGT	1840	False	NA	18	True	AATAAA	-20	NA	121148644	121184830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_121148756_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
m54284U_201201_044215/76483021/ccs	chr12	+	1639	4	NNC	ENSMUSG00000034271.17	novel	1643	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	84.2496290793022	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCGAGTGGTGTCTG	6639	False	NA	34	True	AGTAAA	-20	NA	85646189	85686652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_85646389_85654906_85655140_85678422_85678524_85685546
m54284U_201201_044215/76546065/ccs	chr9	-	4048	22	NIC	ENSMUSG00000032582.15	novel	3999	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_21	113.526006690147	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7559	False	NA	NA	False	AATAAA	-18	NA	107749974	107650761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107738821_107738929_107749847
m54284U_201201_044215/76548038/ccs	chr7	+	973	4	NNC	ENSMUSG00000057215.7	novel	1294	6	NA	NA	0	-4402	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	8.98146239020499	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGTGTTTGTCCCA	NA	False	NA	12	True	AATAAA	-19	NA	106842228	106895201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_106842336_106883988_106884145_106884819_106884938_106894609
m54284U_201201_044215/76613598/ccs	chr11	+	3379	7	NIC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	227.66764275047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	4729	False	NA	10	True	AATAAA	-21	NA	97690663	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97690801_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201201_044215/76613855/ccs	chr19	-	167	1	Intergenic	novelGene_9319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	46774839	46774672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_46774700_46774800
m54284U_201201_044215/76677173/ccs	chr11	-	3917	15	NIC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_14	155.654247927768	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5020	False	NA	-12	True	AATAAA	-12	NA	120042148	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
m54284U_201201_044215/76677240/ccs	chr6	-	199	1	Intergenic	novelGene_3259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGGTGGCAGAAGATAC	NA	False	NA	NA	False	AAGAAA	-3	NA	48870821	48870622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_48870600_48870800
m54284U_201201_044215/76678203/ccs	chr5	+	1904	9	NIC	ENSMUSG00000029432.13	novel	1600	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_7	123.725439481943	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATGTCTAATTTTTAC	7803	False	NA	12	True	AATAAA	-18	NA	129802162	129835314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129831905_129831990_129834142
m54284U_201201_044215/76678761/ccs	chr10	+	1814	6	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	131	junction_1	2163.06195935299	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899472	126903166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_126899629_126900453_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
m54284U_201201_044215/76679106/ccs	chrX	+	1054	5	NNC	ENSMUSG00000086877.8	novel	1412	4	NA	NA	0	615	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	30.3016088681773	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTCATTGTGTTTGT	NA	False	NA	10	True	NA	NA	NA	20828352	20853591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20828835_20833967_20834048_20851664_20851705_20852217_20852400_20853321
m54284U_201201_044215/7670110/ccs	chr11	-	1298	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	198.840962568234	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGGTCTGTGTATTAA	NA	False	NA	-1	True	AATGAA	-36	NA	99121272	99100817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119100_99119145_99119322_99119375_99121227
m54284U_201201_044215/76743191/ccs	chr6	-	3236	1	FSM	ENSMUSG00000064563.3	ENSMUST00000082629.3	140	1	-633	-2463	-633	2463	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGTATTTTCTATGTTTT	NA	False	NA	25	True	AATAAA	-15	NA	115785708	115782472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_115782500_115785700
m54284U_201201_044215/76744212/ccs	chr6	+	2400	20	NIC	ENSMUSG00000030314.17	novel	2543	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.4466041008941	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGGTCCTTCCATGTGC	NA	False	NA	12	True	NA	NA	NA	114620087	114836191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_114620112_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
m54284U_201201_044215/76744946/ccs	chr2	+	2615	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	983	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	837.490397954906	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896542	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162896769_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201201_044215/76808294/ccs	chr11	-	7693	32	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	159	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	15.4454496429277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	5234	False	NA	NA	False	AATAAA	-24	NA	8574728	8381651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
m54284U_201201_044215/76809619/ccs	chr4	-	758	1	Intergenic	novelGene_2257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTACAAAAGTAGTCTTGA	NA	False	NA	NA	False	TTTAAA	-14	NA	136065081	136064323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_136064300_136065100
m54284U_201201_044215/76811027/ccs	chr6	+	188	1	Intergenic	novelGene_3563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	140309247	140309435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_140309200_140309400
m54284U_201201_044215/76875982/ccs	chr16	-	180	1	Intergenic	novelGene_8085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTTTAAGACTATAAC	NA	False	NA	NA	False	NA	NA	NA	14446775	14446595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_14446600_14446800
m54284U_201201_044215/76876409/ccs	chr7	-	997	3	NIC	ENSMUSG00000051811.15	novel	435	4	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	401.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTTTTCTCGTT	NA	False	NA	-9	True	AATAAA	-17	NA	4756022	4754790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4754975_4755106_4755849_4755951
m54284U_201201_044215/76939567/ccs	chr3	-	188	1	Intergenic	novelGene_1701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAGGAGCTTTAATTGT	NA	False	NA	NA	False	NA	NA	NA	137581675	137581487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_137581500_137581700
m54284U_201201_044215/76939932/ccs	chr1	-	175	1	Intergenic	novelGene_211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAGAAAGGACA	9560	False	NA	NA	False	NA	NA	NA	82801048	82800873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_82800900_82801000
m54284U_201201_044215/76940612/ccs	chr14	-	4160	20	NIC	ENSMUSG00000068015.9	novel	2678	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	30.6701692166573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTGGCCTGTTGGTGC	569	False	NA	NA	False	AATAAA	-34	NA	75185316	75000762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_75002688_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
m54284U_201201_044215/76941746/ccs	chr13	+	2787	9	NIC	ENSMUSG00000093930.3	novel	3245	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	215.385120191716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCTCTTTGAGTGTTT	NA	False	NA	15	True	AATAAA	-15	NA	120151981	120169618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_120152050_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
m54284U_201201_044215/76941934/ccs	chr4	+	1983	9	NNC	ENSMUSG00000028558.15	novel	1606	8	NA	NA	-16165	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_5	5.12195031213697	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTTGTCTTATTTCTA	NA	False	NA	4	True	TTTAAA	-21	NA	109075516	109111768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_109075716_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
m54284U_201201_044215/77004839/ccs	chr11	-	1635	7	NIC	ENSMUSG00000020530.15	novel	386	4	NA	NA	0	551	combination_of_known_junctions	FALSE	canonical	3	67	junction_6	227.551215236385	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTTTTGTTTGTAT	NA	False	NA	0	True	ATTAAA	-16	NA	84761615	84742656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_84743363_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
m54284U_201201_044215/77007133/ccs	chr13	-	1846	3	Intergenic	novelGene_7158	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCTCATTTGGAACATG	NA	False	NA	NA	False	NA	NA	NA	64116541	64077847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64079440_64079875_64079955_64116366
m54284U_201201_044215/77007508/ccs	chr6	+	168	1	Intergenic	novelGene_3142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAAAAGAAGGGG	NA	False	NA	NA	False	NA	NA	NA	29982618	29982786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29982600_29982800
m54284U_201201_044215/77072514/ccs	chr6	+	2664	15	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_14	400.896851714111	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849879_71851300
m54284U_201201_044215/77137233/ccs	chr10	+	4616	20	NIC	ENSMUSG00000069601.15	novel	3751	20	NA	NA	0	422	combination_of_known_junctions	FALSE	canonical	3	13	junction_18	20.5534233960282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACTTGGGTTCCACAGT	NA	False	NA	31	True	AATAAA	-17	NA	69761648	69861206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69838340_69838432_69840439_69840822_69851400_69851484_69859661
m54284U_201201_044215/77202544/ccs	chr5	+	1925	13	NNC	ENSMUSG00000039682.13	novel	795	4	NA	NA	534	-415	at_least_one_novel_splicesite	FALSE	canonical	2	37	junction_1	734.083593483891	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATATGCATTTTCAAGC	NA	False	NA	7	True	ATTAAA	-10	NA	45651401	45669618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_45651663_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
m54284U_201201_044215/77202796/ccs	chr3	+	185	1	Intergenic	novelGene_1583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTGCCTTTTGGTCAG	NA	False	NA	NA	False	NA	NA	NA	96217222	96217407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_96217200_96217400
m54284U_201201_044215/77267021/ccs	chr1	+	3006	17	NNC	ENSMUSG00000026289.16	novel	3004	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	48.1656889678742	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	7308	False	NA	23	True	AATAAA	-32	NA	87683797	87720150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713715_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
m54284U_201201_044215/77268352/ccs	chr2	+	190	1	Intergenic	novelGene_962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTACATTCTTCT	NA	False	NA	NA	False	NA	NA	NA	103652574	103652764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_103652600_103652800
m54284U_201201_044215/77269619/ccs	chr2	-	2828	1	NIC	ENSMUSG00000027300.11	novel	3731	6	NA	NA	0	-27415	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGTTGGTCTTCATTGT	NA	False	NA	NA	False	NA	NA	NA	130471947	130469119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_130469100_130471900
m54284U_201201_044215/77332860/ccs	chr2	-	1524	4	Antisense	novelGene_ENSMUSG00000027523.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	3.2659863237109	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCCCTCTAGATTG	535	False	NA	NA	False	NA	NA	NA	174169170	174163257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_174163991_174165456_174165759_174167686_174167944_174168938
m54284U_201201_044215/77333681/ccs	chr4	-	3680	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_7	255.6	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126073704_126074608_126080227_126080382_126088109_126088198_126096362
m54284U_201201_044215/77333820/ccs	chr10	-	1765	11	NIC	ENSMUSG00000034758.13	novel	1972	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_8	22.2405035914208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTGTCCTTTACCCA	NA	False	NA	-15	True	NA	NA	NA	81433201	81426738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81433129
m54284U_201201_044215/77334000/ccs	chr2	+	4999	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_8	66.0879644687219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4559	False	NA	12	True	AATAAA	-16	NA	18069363	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201201_044215/77334900/ccs	chr10	+	898	8	NNC	ENSMUSG00000061315.15	novel	6745	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	4018.5497688716	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTGCTAGATCTTTTCC	4972	False	NA	4	True	AATAAA	-28	NA	127871503	127884506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127871553_127872288_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
m54284U_201201_044215/7734236/ccs	chr5	-	3186	16	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1263	junction_13	140.36735929537	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
m54284U_201201_044215/7734666/ccs	chr7	-	1408	8	NIC	ENSMUSG00000030689.16	novel	1741	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_7	292.908775936141	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCTTTCCTCTA	9917	False	NA	-4	True	ATTAAA	-15	NA	126461549	126451604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876_126461190_126461445
m54284U_201201_044215/7735375/ccs	chr5	-	4794	22	NIC	ENSMUSG00000072889.10	novel	3712	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_21	11.8734827172458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTGATAAAGGATATTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	72717027	72670643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_72671675_72673554_72673609_72674368_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
m54284U_201201_044215/7735842/ccs	chr7	-	2504	16	NIC	ENSMUSG00000007833.16	novel	3537	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_15	102.490454840113	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9333	False	NA	-8	True	AATAAA	-20	NA	44803997	44791258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44803815
m54284U_201201_044215/77399751/ccs	chr11	-	186	1	Intergenic	novelGene_6333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAAAGTCCTTTTGAGCT	NA	False	NA	NA	False	NA	NA	NA	101279510	101279324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_101279300_101279500
m54284U_201201_044215/77399953/ccs	chr8	+	3494	22	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2092	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	772.336353007465	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760510	111782204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_111760652_111760838_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
m54284U_201201_044215/77400513/ccs	chr4	+	1847	20	NNC	ENSMUSG00000028292.15	novel	1868	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_12	155.081928128757	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTAGTAGTGTGTTTT	5	True	NA	12	True	AATAGA	-27	NA	34614973	34660167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652135_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
m54284U_201201_044215/77465262/ccs	chr9	-	197	1	Intergenic	novelGene_4665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGCCCAGGCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	21540174	21539977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21540000_21540200
m54284U_201201_044215/77529119/ccs	chr7	+	178	1	Intergenic	novelGene_3780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGGCATTTTGGGAGGCA	NA	False	NA	NA	False	NA	NA	NA	30179956	30180134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_30180000_30180100
m54284U_201201_044215/77529608/ccs	chr11	+	2592	2	ISM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	1237	0	252	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49136309	49153854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_49136445_49151397
m54284U_201201_044215/77529660/ccs	chr4	-	1825	9	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	0	-1239	combination_of_known_splicesites	FALSE	canonical	3	18	junction_8	521.977968883745	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTTGGATTTGGGGGA	NA	False	NA	-34	True	NA	NA	NA	141327235	141304611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323288_141327158
m54284U_201201_044215/77530573/ccs	chr1	+	1864	8	NNC	ENSMUSG00000003464.14	novel	1917	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	148.836302352481	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGTTATTTTTCATC	NA	False	NA	24	True	AATAAA	-14	NA	171954322	171962850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961825
m54284U_201201_044215/77597003/ccs	chr7	+	2525	21	ISM	ENSMUSG00000040811.16	ENSMUST00000117338.8	2765	22	2930	-225	-1819	0	3prime_fragment	FALSE	canonical	3	14	junction_1	46.9870992933167	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18913275	18940407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_18913371_18913450_18913575_18913675_18913781_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
m54284U_201201_044215/77597320/ccs	chr6	-	1790	8	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1123	junction_1	272.823034517369	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942501	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
m54284U_201201_044215/77661468/ccs	chrX	+	4770	33	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	0	-986	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	36.8033201627244	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGCGCAGTTTGTTTAG	NA	False	NA	NA	False	AATAAA	-34	NA	41239890	41365066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
m54284U_201201_044215/77726378/ccs	chrX	-	1084	8	NIC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	0	-473	combination_of_known_splicesites	FALSE	canonical	3	126	junction_6	133.486986295309	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336582	72326974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336481
m54284U_201201_044215/77791475/ccs	chr9	+	2491	7	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_2	6696.88849806801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_40712645_40713213_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715992_40716227
m54284U_201201_044215/77793912/ccs	chr9	+	3629	15	NNC	ENSMUSG00000032477.15	novel	3632	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	122.641442707544	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCTGCCTAGTTCCTAA	NA	False	NA	28	True	AATAAA	-18	NA	109704646	109722963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708904_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
m54284U_201201_044215/77794031/ccs	chr3	+	3545	13	NIC	ENSMUSG00000028060.15	novel	3636	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_9	129.536004218475	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-10	True	NA	13	True	AATAAA	-14	NA	88593120	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607671_88607822_88616086_88616249_88617164_88617250_88618067
m54284U_201201_044215/77922343/ccs	chr12	+	1896	5	NIC	ENSMUSG00000001175.17	novel	4115	6	NA	NA	0	816	intron_retention	FALSE	canonical	3	3420	junction_4	226.047561367072	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGTGTTAAATGCTT	9259	False	NA	26	True	AATAAA	-15	NA	100165787	100173570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100172493_100172658
m54284U_201201_044215/77922807/ccs	chr4	-	3572	17	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	370.012584245455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135048766_135049600_135049811_135051224_135051373_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
m54284U_201201_044215/77923554/ccs	chr9	-	2503	10	NIC	ENSMUSG00000062762.18	novel	2220	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	488	junction_2	33.8033528908992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	False	NA	-8	True	ATTAAA	-17	NA	36708689	36690454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
m54284U_201201_044215/77924777/ccs	chr9	-	2184	15	NIC	ENSMUSG00000032507.16	novel	2257	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	11.0628999408853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGCATGTAGAATGGATG	NA	False	NA	-12	True	AGTAAA	-11	NA	113875259	113807104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113875140
m54284U_201201_044215/77988886/ccs	chr8	-	3133	14	NNC	ENSMUSG00000035569.18	novel	8481	13	NA	NA	0	489	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	119.088202606304	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTACATGGCACTGTCC	NA	False	NA	NA	False	NA	NA	NA	123769016	123610071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123622542_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123627340_123627438_123635406_123635546_123642639_123642785_123701467_123701532_123768687
m54284U_201201_044215/77990008/ccs	chr7	-	1773	11	NIC	ENSMUSG00000063511.12	novel	3035	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	573.136842298591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9074	False	NA	-9	True	AATAAA	-16	NA	45045133	45025885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
m54284U_201201_044215/7799461/ccs	chr11	-	3453	14	NIC	ENSMUSG00000038909.17	novel	3560	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_1	222.401444165419	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGACTGCTCTGAAGCT	NA	False	NA	-5	True	AATAAA	-17	NA	95201072	95165084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_95166714_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
m54284U_201201_044215/7801372/ccs	chr17	+	2644	7	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	546	junction_5	71.9320667173009	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5622	False	NA	12	True	AATAAA	-23	NA	34128471	34134564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34133037_34134316
m54284U_201201_044215/78053711/ccs	chr17	+	4383	6	NIC	ENSMUSG00000054469.15	novel	4467	6	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	29.4659125092029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGTGATTCTGTTTTT	NA	False	NA	16	True	AATAAA	-26	NA	73415040	73550363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_73415141_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
m54284U_201201_044215/78054907/ccs	chr9	-	1177	7	NIC	ENSMUSG00000032067.7	novel	589	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_6	39.4574313518872	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTTTTCAGGATTTATT	7915	False	NA	NA	False	AATAAA	-18	NA	50439995	50432916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439445_50439533_50439856
m54284U_201201_044215/78054936/ccs	chr18	-	185	1	Intergenic	novelGene_9049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAAATGTATAAGGCTA	NA	False	NA	NA	False	NA	NA	NA	80291049	80290864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_80290900_80291000
m54284U_201201_044215/78056193/ccs	chr19	+	192	1	Intergenic	novelGene_9140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCTCTTCCTGGTCCCT	3272	False	NA	NA	False	NA	NA	NA	7225145	7225337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_7225100_7225300
m54284U_201201_044215/78119598/ccs	chr5	+	1594	10	NNC	ENSMUSG00000000916.16	novel	2243	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	90.1288515212704	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGATCACAGTTTTATT	NA	False	NA	18	True	AATAAA	-18	NA	135398823	135404997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_135398931_135399021_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
m54284U_201201_044215/78119928/ccs	chr16	+	1283	6	ISM	ENSMUSG00000022868.7	ENSMUST00000232556.2	1336	7	1828	0	-524	0	3prime_fragment	FALSE	canonical	3	93	junction_1	9.66643677887566	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTCATGTTCCTTGTCT	NA	False	NA	22	True	NA	NA	NA	22712984	22718193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_22713186_22713544_22713630_22713943_22714108_22715257_22715360_22716877_22716962_22717546
m54284U_201201_044215/78120745/ccs	chr14	+	1866	6	NIC	ENSMUSG00000022194.16	novel	1030	7	NA	NA	0	755	intron_retention	FALSE	canonical	3	2071	junction_5	223.846018503792	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCCTTTGGATGTTTTT	NA	False	NA	19	True	AATAAA	-18	NA	55131604	55136381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134730_55135473
m54284U_201201_044215/78184569/ccs	chr7	+	1160	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	0	-412	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	1110.36804709069	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039383	137069911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060923_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
m54284U_201201_044215/78186487/ccs	chr11	-	4035	1	ISM	ENSMUSG00000039976.5	ENSMUST00000036113.4	6986	12	81420	0	74897	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGTCCTGTGCCTTGA	3016	False	NA	-1	True	AATAAA	-15	NA	119037905	119033870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_119033900_119037900
m54284U_201201_044215/78251348/ccs	chr10	-	1092	2	NNC	ENSMUSG00000112261.2	novel	660	3	NA	NA	7808	561	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCAGAAACCCTAAG	9361	False	NA	NA	False	AAGAAA	-10	NA	95289278	95280616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95281620_95289189
m54284U_201201_044215/78315807/ccs	chr8	-	3341	12	NNC	ENSMUSG00000036534.7	novel	3333	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	97.860585604604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTCTCCTTTATCTTCT	NA	False	NA	0	True	AATAAA	-19	NA	96580150	96562547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_96564300_96567002_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
m54284U_201201_044215/78316886/ccs	chrX	-	189	1	Intergenic	novelGene_9541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCCTGACTAAGACAAT	NA	False	NA	NA	False	NA	NA	NA	93231531	93231342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_93231300_93231500
m54284U_201201_044215/78316913/ccs	chr9	-	4799	7	NIC	ENSMUSG00000037287.16	novel	5000	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	15.8788818526019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTGTGTTCTGAGTGTT	NA	False	NA	-1	True	ATTAAA	-17	NA	42383535	42323611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42361219_42361360_42362908_42363059_42383361
m54284U_201201_044215/78317808/ccs	chr17	-	1755	7	NNC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	0	365	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	1604.61529657423	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTTTGTGTCTGTCA	2963	False	NA	-7	True	AATAAA	-24	NA	65920550	65887049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_65887843_65889574_65889749_65894047_65894162_65899285_65899367_65900434_65900539_65901896_65902050_65920214
m54284U_201201_044215/78318318/ccs	chr2	-	2988	19	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_16	36.1015371924011	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539389	130526032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130534085_130534251_130537960_130538024_130539278
m54284U_201201_044215/78447071/ccs	chr7	-	871	6	NNC	ENSMUSG00000074227.13	novel	1211	6	NA	NA	255	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	491.498931840141	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTATGTAGTTTGGTTT	724	False	NA	-16	True	AATAAA	-21	NA	28981080	28955765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_28956178_28957592_28957632_28957851_28958014_28958823_28958878_28959795_28959856_28980936
m54284U_201201_044215/78449281/ccs	chr13	+	2896	1	Intergenic	novelGene_6996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4819	False	NA	NA	False	NA	NA	NA	24438890	24441786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_24438900_24441800
m54284U_201201_044215/78644947/ccs	chr7	-	3614	29	NIC	ENSMUSG00000003435.10	novel	3513	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	628	junction_28	72.3503645816802	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTACGAAGAGTTTT	NA	False	NA	-11	True	AATAAA	-18	NA	28038171	28014318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776_28037861_28038119
m54284U_201201_044215/7865292/ccs	chr17	+	2283	10	NIC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	0	-294	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	138.283926920103	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	9	True	AATAAA	-22	NA	27136064	27151263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_27136260_27139770_27139906_27139993_27140094_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
m54284U_201201_044215/7865957/ccs	chr5	-	179	1	Intergenic	novelGene_2940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAATAAAAAAAAGTATA	NA	False	NA	NA	False	NA	NA	NA	129226684	129226505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129226500_129226700
m54284U_201201_044215/7866061/ccs	chr7	+	2141	7	NNC	ENSMUSG00000003184.16	novel	1797	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_1	55.5980115551706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647071	44651814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_44647803_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44650447_44651096_44651213_44651587
m54284U_201201_044215/7866948/ccs	chr7	+	178	1	Intergenic	novelGene_3762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAATACAAAG	NA	False	NA	NA	False	NA	NA	NA	29644881	29645059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29644900_29645100
m54284U_201201_044215/787069/ccs	chr16	-	192	1	Intergenic	novelGene_8129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCCTGTTGCCCTCCTTC	NA	False	NA	NA	False	NA	NA	NA	18667272	18667080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18667100_18667300
m54284U_201201_044215/78709037/ccs	chr7	+	3771	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-122	0	intron_retention	FALSE	canonical	3	132	junction_14	21.9077752700714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640894	140652313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140648675_140650323_140650608_140650700_140650855_140650954_140651275_140651549_140651677_140651908
m54284U_201201_044215/78711018/ccs	chr11	-	169	1	Intergenic	novelGene_5711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	19883786	19883617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_19883600_19883800
m54284U_201201_044215/787241/ccs	chr7	-	1345	3	NIC	ENSMUSG00000050708.17	novel	943	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	56898	junction_1	8751.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTTTTTTCTATAT	NA	False	NA	-20	True	AATAAA	-16	NA	45109263	45107368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45107708_45107958_45108655_45108953
m54284U_201201_044215/787414/ccs	chr17	-	4302	9	NIC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-1223	369	intron_retention	FALSE	canonical	0	0	junction_2	290.554211809087	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGACTCCAGGGTGGAAGA	NA	False	NA	NA	False	NA	NA	NA	6718367	6707507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6714802_6715923_6716016_6716181_6716313_6716836
m54284U_201201_044215/78774295/ccs	chr7	-	2865	10	NNC	ENSMUSG00000035354.10	novel	3147	11	NA	NA	-15780	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_9	49.6083425879255	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98681631	98535956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681413
m54284U_201201_044215/78775644/ccs	chr3	-	3032	8	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1645	junction_7	213.190534690527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642467	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_54636315_54636614_54636722_54637185_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
m54284U_201201_044215/78776327/ccs	chr1	+	854	9	NNC	ENSMUSG00000026127.14	novel	5836	9	NA	NA	0	5151	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	171.809305626907	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATACCAGTGGCCTCTCT	5660	False	NA	NA	False	NA	NA	NA	34478978	34493588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34493524
m54284U_201201_044215/787938/ccs	chr11	-	1451	6	NIC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	1629.06567086781	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	4306	False	NA	-7	True	AATAAA	-19	NA	120489191	120485334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120485694_120485805_120485981_120486080_120486145_120486433_120486894_120488460_120488593_120488930
m54284U_201201_044215/788151/ccs	chr13	-	178	1	Intergenic	novelGene_7005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTTTTAAAAATAGGC	NA	False	NA	NA	False	NA	NA	NA	29330704	29330526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_29330500_29330700
m54284U_201201_044215/789012/ccs	chr3	+	3928	23	NNC	ENSMUSG00000039234.12	novel	3649	20	NA	NA	-2656	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	16.1403964230813	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGTGTTTTATGTCT	NA	False	NA	18	True	AATAAA	-18	NA	123058447	123159290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_123058555_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
m54284U_201201_044215/78907414/ccs	chr7	-	3899	21	ISM	ENSMUSG00000030739.19	ENSMUST00000107899.10	6390	40	34584	0	-335	0	3prime_fragment	TRUE	canonical	3	29	junction_14	18.5391477689779	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	NA	False	NA	-1	True	AATAAA	-17	NA	44280341	44255226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137
m54284U_201201_044215/78907851/ccs	chr2	+	6945	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	0	1626	combination_of_known_junctions	TRUE	canonical	3	120	junction_19	92.1634357480714	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATGTATTGATGTTGT	6650	False	NA	20	True	AATAAA	-22	NA	32041093	32122800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
m54284U_201201_044215/78971701/ccs	chr17	+	3774	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	198.257456110966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201201_044215/78972305/ccs	chr4	+	196	1	Intergenic	novelGene_2076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATGCGTTTATTTATGG	NA	False	NA	NA	False	NA	NA	NA	120807698	120807894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_120807700_120807900
m54284U_201201_044215/78973155/ccs	chr11	-	2141	13	NNC	ENSMUSG00000078789.10	novel	2139	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_12	62.59526073647	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTGCTGCCCC	NA	False	NA	0	True	AATAAA	-21	NA	75081345	75068521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081169
m54284U_201201_044215/78973467/ccs	chr7	+	2482	8	NIC	ENSMUSG00000059851.16	novel	2189	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_1	229.044866828332	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	621	False	NA	16	True	ATTAAA	-17	NA	4743151	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4743181_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
m54284U_201201_044215/79038278/ccs	chr14	-	1578	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	90.8745701502901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCTTTTTGGC	8876	False	NA	1	True	AATAAA	-20	NA	51033185	51026704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_51027470_51029429_51029764_51031014_51031332_51032164_51032234_51033092
m54284U_201201_044215/79038541/ccs	chr4	-	3201	11	NIC	ENSMUSG00002076083.1	novel	2723	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_1	15.2105226734652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTGGCCCCCTTTGTAC	8248	False	NA	0	True	AATAAA	-40	NA	156319314	156313791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_156314720_156314961_156315144_156315357_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085_156317903_156318048_156318171_156318259_156318520_156319112
m54284U_201201_044215/79038798/ccs	chr5	-	3402	12	NIC	ENSMUSG00000028953.11	novel	2569	14	NA	NA	59	0	intron_retention	FALSE	canonical	3	1197	junction_11	122.477658613741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCCTGGGTCTCTGAGC	NA	False	NA	-29	True	AATAAA	-21	NA	24782406	24770342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
m54284U_201201_044215/79038982/ccs	chr9	-	229	1	Intergenic	novelGene_4811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCCTGACTAAGACATG	NA	False	NA	NA	False	NA	NA	NA	58170726	58170497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58170500_58170700
m54284U_201201_044215/79039295/ccs	chr11	+	173	1	Intergenic	novelGene_6262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGAGAACTGTTGTT	3775	False	NA	NA	False	NA	NA	NA	97017343	97017516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97017300_97017500
m54284U_201201_044215/79102387/ccs	chr19	-	1753	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	192	junction_3	32.6410401182315	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9953	False	NA	0	True	AATAAA	-15	NA	6117880	6112850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6117053_6117152_6117350_6117698
m54284U_201201_044215/79103032/ccs	chr5	-	4275	32	NIC	ENSMUSG00000060261.17	novel	4375	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_23	87.7984282082411	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	621	False	NA	-6	True	AATAAA	-28	NA	134343614	134266690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
m54284U_201201_044215/79103576/ccs	chr10	-	693	4	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_3	509.183878596153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634028	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80632357_80632424_80632489_80632565_80632657_80633914
m54284U_201201_044215/79169358/ccs	chr1	+	4151	19	NIC	ENSMUSG00000055013.17	novel	11921	18	NA	NA	0	-232	combination_of_known_junctions	FALSE	canonical	3	33	junction_13	123.248268963378	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACGAAATCATGAATTCG	NA	False	NA	21	True	NA	NA	NA	89382527	89817491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_89383315_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89751578_89751657_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
m54284U_201201_044215/79169845/ccs	chr12	-	1386	3	NNC	ENSMUSG00000113608.2	novel	549	2	NA	NA	27471	907	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTTATCTTCTTCCC	NA	False	NA	NA	False	AAAAAG	-39	NA	38098263	38096184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_38096710_38097291_38097424_38097534
m54284U_201201_044215/79235735/ccs	chr11	+	901	7	NIC	ENSMUSG00000020514.9	novel	722	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	483.207138698187	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTTTCATTGAATTATT	1481	False	NA	12	True	AGTAAA	-15	NA	58062486	58070391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_58062540_58062619_58062848_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
m54284U_201201_044215/79301229/ccs	chr17	-	2418	7	NNC	ENSMUSG00000015120.16	novel	1286	8	NA	NA	0	1406	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	1800.08340084564	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4747	False	NA	-1	True	ATTAAA	-19	NA	25492357	25479483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_25481466_25483739_25483820_25484092_25484152_25487514_25487588_25488165_25488250_25488376_25488454_25492294
m54284U_201201_044215/7930555/ccs	chr14	-	1337	6	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	14986	1	0	0	3prime_fragment	FALSE	canonical	3	54	junction_3	9.47839648885823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACCGCCTGCTGTGAGT	NA	False	NA	-5	True	AATAAA	-19	NA	64678366	64360074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158
m54284U_201201_044215/7930654/ccs	chr7	-	3317	17	NIC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_7	263.070807958618	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024482	143989471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003759_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
m54284U_201201_044215/7932379/ccs	chr8	-	2936	9	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	462	junction_2	70.3738898669102	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTAGTGTTGGTCAAAT	NA	False	NA	-16	True	AATAAA	-17	NA	110419892	110397959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110399274_110402007_110402057_110403389_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201201_044215/79365375/ccs	chr2	+	4573	17	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	0	-547	intron_retention	FALSE	canonical	3	45	junction_11	74.9708276598305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTATCCTTTTGCTCT	NA	False	NA	10	True	AATAAA	-19	NA	90575947	90610818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
m54284U_201201_044215/79430843/ccs	chr2	-	3379	25	NNC	ENSMUSG00000027379.15	novel	3418	25	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	178.998836122846	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACCTAGTTGTTCTAA	NA	False	NA	-5	True	AATAAA	-18	NA	127673785	127643041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659357_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
m54284U_201201_044215/79431167/ccs	chr1	+	3239	13	NIC	ENSMUSG00000026276.21	novel	552	6	NA	NA	0	-527	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	275.56259371612	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAGTCCTCTTTTTGAG	NA	False	NA	NA	False	AATAAA	-23	NA	93406944	93437455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_93407037_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
m54284U_201201_044215/79497569/ccs	chr9	+	193	1	Intergenic	novelGene_4921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGTTAGATTTTTGAAA	NA	False	NA	NA	False	NA	NA	NA	71904995	71905188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_71905000_71905200
m54284U_201201_044215/79562567/ccs	chr17	+	2317	18	NNC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	0	-86	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_16	371.824194793601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTTTCTGCAATGTACT	NA	False	NA	14	True	AATAAA	-19	NA	71923209	71964887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960524_71964335_71964386_71964470
m54284U_201201_044215/79626590/ccs	chr6	-	171	1	Intergenic	novelGene_3255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGCACTCAGAAGGCAG	NA	False	NA	NA	False	NA	NA	NA	47960406	47960235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47960200_47960400
m54284U_201201_044215/79692226/ccs	chr18	-	233	1	Intergenic	novelGene_8935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAGACAGGGACACAAGA	NA	False	NA	NA	False	NA	NA	NA	42478975	42478742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_42478700_42479000
m54284U_201201_044215/79757495/ccs	chr2	+	2173	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	0	-2435	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	174.629345426316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGGCTCCTGAACAC	2378	False	NA	NA	False	AATAAA	-27	NA	90770802	90847400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
m54284U_201201_044215/79759279/ccs	chr10	-	4252	19	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_1	11.8286375659527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484539	83435896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
m54284U_201201_044215/79759294/ccs	chr10	-	239	1	Intergenic	novelGene_5361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGAAAGGCCAAGGGC	8480	False	NA	NA	False	NA	NA	NA	62871331	62871092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62871100_62871300
m54284U_201201_044215/79823929/ccs	chr3	-	2943	9	NIC	ENSMUSG00000074513.10	novel	1343	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	75.1713667229751	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489932	84403399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84447876_84447930_84455240_84455343_84489720
m54284U_201201_044215/79955213/ccs	chrX	-	5258	7	ISM	ENSMUSG00000045180.14	ENSMUST00000101141.9	7494	10	109036	483	12815	0	3prime_fragment	TRUE	canonical	3	44	junction_5	7.67571929311297	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151443421	151392987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151440419_151440521_151442259
m54284U_201201_044215/80020414/ccs	chr3	+	2519	14	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	291.575702918718	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_157742514_157747499_157747571_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201201_044215/80020752/ccs	chr4	-	5396	17	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_14	341.999269005067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201201_044215/80021118/ccs	chr13	-	3180	4	NNC	ENSMUSG00000114816.2	novel	3416	3	NA	NA	-7259	22734	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	39.8246155034798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	1335	False	NA	NA	False	AATAAA	-24	NA	67010194	66974980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_66977867_67002549_67002611_67002809_67002937_67010088
m54284U_201201_044215/80021500/ccs	chr14	-	1524	6	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	314.716761549175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168313	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_51165495_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
m54284U_201201_044215/80022018/ccs	chr15	-	3911	15	NNC	ENSMUSG00000022378.15	novel	1896	13	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_14	423.153738887764	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTCATTTGTATATAT	NA	False	NA	-4	True	NA	NA	NA	63932530	63800945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63829433_63829517_63842778_63842818_63894418_63894470_63932043_63932230_63932482
m54284U_201201_044215/80085243/ccs	chrX	+	3874	1	NIC	ENSMUSG00000031367.16	novel	3199	5	NA	NA	14272	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCTCATGTGAATGAC	NA	False	NA	-2	True	AATAAA	-13	NA	162708668	162712542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_162708700_162712500
m54284U_201201_044215/80086928/ccs	chrX	+	4132	17	NIC	ENSMUSG00000025265.15	novel	4001	18	NA	NA	-275	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	95.5735972954874	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGAGCACTGCTATGG	NA	False	NA	20	True	AATACA	-23	NA	149829890	149872517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149871598
m54284U_201201_044215/80216898/ccs	chr8	-	3365	13	NIC	ENSMUSG00000035770.9	novel	4627	13	NA	NA	0	-1254	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	40.4275758472962	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTTTTTTTGTTGTTG	1768	False	NA	-9	True	AATATA	-17	NA	105169679	105145565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_105147307_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
m54284U_201201_044215/80217637/ccs	chr9	-	190	1	Intergenic	novelGene_4909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAATGAAGACCAAAGTG	NA	False	NA	NA	False	NA	NA	NA	69310324	69310134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_69310100_69310300
m54284U_201201_044215/80217879/ccs	chr7	+	2368	14	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	162.028962273368	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428093	49508013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49507114
m54284U_201201_044215/80218119/ccs	chr7	+	3349	15	NNC	ENSMUSG00000030494.14	novel	689	2	NA	NA	19220	0	intron_retention	FALSE	canonical	3	27	junction_1	23.30422139214	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTTGCTTT	NA	False	NA	26	True	AATAAA	-26	NA	35052974	35091714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35053058_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
m54284U_201201_044215/80218716/ccs	chr8	-	1620	8	NIC	ENSMUSG00000038515.11	novel	1408	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	134.762678779537	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTCTGTGCTCATGG	3640	False	NA	NA	False	NA	NA	NA	13250617	13222021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_13222613_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
m54284U_201201_044215/80282264/ccs	chr8	-	4157	23	NIC	ENSMUSG00000031835.17	novel	4195	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_22	108.399513584954	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGGCATGTGTCGT	8435	False	NA	-7	True	AATAAA	-14	NA	120285180	120234894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285128
m54284U_201201_044215/80283905/ccs	chr3	+	2900	27	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	125.987554565225	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_54600316_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/80347253/ccs	chr18	+	4440	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	-1303	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	87.7279174493502	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCAGCCGCTCACTCTG	NA	False	NA	10	True	AATAAA	-16	NA	82990900	83022136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_82990974_83004868_83006324_83011209_83011315_83012594_83012663_83019397
m54284U_201201_044215/80347589/ccs	chr18	+	9121	53	Fusion	ENSMUSG00000024542.10_ENSMUSG00000079614.5	novel	4548	26	NA	NA	0	0	multi-exon	FALSE	canonical	2	8	junction_8	580.927854993286	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	NA	False	NA	10	True	AATAAA	-19	NA	67908044	68018241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
m54284U_201201_044215/80347964/ccs	chr13	-	2787	14	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2499.69908484859	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	4751	False	NA	-8	True	AATACA	-15	NA	58550330	58538955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
m54284U_201201_044215/80348187/ccs	chr2	+	2750	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	132.014898848598	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398175	144432669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_144398245_144401137_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
m54284U_201201_044215/80348705/ccs	chr15	+	6194	11	NIC	ENSMUSG00000022401.13	novel	1641	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	16.5060594934103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGTCTGTCTTATTTT	NA	False	NA	24	True	TATAAA	-17	NA	81284350	81341683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81284489_81298632_81298750_81300047_81300196_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
m54284U_201201_044215/80413348/ccs	chr5	+	175	1	Intergenic	novelGene_2555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	35639158	35639333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_35639200_35639300
m54284U_201201_044215/80415416/ccs	chr7	+	518	6	NNC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	9286.60102728657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_24584093_24584560_24584638_24584876_24584978_24587706_24587891_24588331_24588387_24589165
m54284U_201201_044215/80480368/ccs	chr14	-	1626	6	NIC	ENSMUSG00000021792.16	novel	1567	6	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_5	123.38816799029	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCACCTCTGTGCACA	NA	False	NA	-22	True	AATAAA	-11	NA	40735732	40715696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735582
m54284U_201201_044215/80544039/ccs	chr11	-	2147	14	NNC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_3	285.568155783577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687229	120680027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682004_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
m54284U_201201_044215/80609998/ccs	chr8	-	186	1	Intergenic	novelGene_4288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAACCCCAAAG	8236	False	NA	NA	False	NA	NA	NA	47157850	47157664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_47157700_47157800
m54284U_201201_044215/80610350/ccs	chr16	-	158	1	Intergenic	novelGene_8032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	4570617	4570459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_4570500_4570600
m54284U_201201_044215/80610573/ccs	chrX	-	3957	29	NNC	ENSMUSG00000031161.16	novel	4069	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_28	77.9875709615949	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAAGTGCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	7814077	7796362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813945
m54284U_201201_044215/80611936/ccs	chr7	-	179	1	Intergenic	novelGene_3991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGTCAGTGTTAT	4786	False	NA	NA	False	NA	NA	NA	101615860	101615681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_101615700_101615900
m54284U_201201_044215/8061196/ccs	chr2	-	6578	17	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	0	287	combination_of_known_junctions	FALSE	canonical	3	81	junction_13	18.9348182919721	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTGTGGTTGTCACA	NA	False	NA	-2	True	AATAAA	-24	NA	25873294	25818255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
m54284U_201201_044215/8062072/ccs	chr12	-	212	1	Intergenic	novelGene_6666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	59147573	59147361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_59147400_59147600
m54284U_201201_044215/8062508/ccs	chr18	+	1450	6	NIC	ENSMUSG00000042705.10	novel	1610	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	547.319504494404	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCGTACAATGTTTTT	NA	False	NA	26	True	AATAAA	-27	NA	47091931	47221062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47219318_47219379_47220094
m54284U_201201_044215/8062677/ccs	chr8	+	5469	19	ISM	ENSMUSG00000059854.9	ENSMUST00000043141.7	15783	87	247114	50634	69602	-50634	internal_fragment	FALSE	canonical	3	19	junction_12	4.32370725702428	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTAAACTGCCTAGAATT	NA	False	NA	NA	False	TTTAAA	-8	NA	111240722	111286251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_111240920_111241461_111241636_111245712_111245934_111249703_111249842_111252075_111252260_111254538_111254681_111257680_111257850_111259307_111259926_111261796_111262019_111264936_111265146_111265350_111265534_111266350_111266471_111268152_111268313_111268427_111268601_111276220_111276420_111277904_111278005_111282163_111282264_111283627_111283797_111284260
m54284U_201201_044215/80676852/ccs	chr11	-	3125	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	473.607244966974	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
m54284U_201201_044215/80741187/ccs	chr2	+	2134	6	ISM	ENSMUSG00000027229.6	ENSMUST00000028661.6	2115	7	92	0	92	0	3prime_fragment	FALSE	canonical	3	14	junction_2	46.343931641586	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	2037	False	NA	NA	False	AATAAA	-15	NA	122016844	122036878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_122017027_122018390_122018531_122021087_122021150_122023712_122023787_122028866_122028956_122035291
m54284U_201201_044215/80741864/ccs	chr18	+	5902	10	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	22.2660678562196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTCAAGAGAGTTATT	NA	False	NA	9	True	AATAAA	-22	NA	65713841	65822012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65771820_65772003_65777263_65777441_65784630_65784794_65789421_65789704_65815965_65816079_65818595_65818762_65820032
m54284U_201201_044215/80742827/ccs	chr18	-	4034	22	NNC	ENSMUSG00000003778.15	novel	4468	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	152.74949480527	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAACTAGTATGACCC	NA	False	NA	NA	False	AATAAA	-17	NA	34757654	34731667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_34732639_34732853_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
m54284U_201201_044215/80743145/ccs	chr13	-	182	1	Intergenic	novelGene_7296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAATATTTCAGATGA	NA	False	NA	NA	False	NA	NA	NA	107666307	107666125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_107666100_107666300
m54284U_201201_044215/80807159/ccs	chr19	-	1926	1	Antisense	novelGene_ENSMUSG00000118038.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAACAGTCTAG	NA	False	NA	NA	False	NA	NA	NA	29048215	29046289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_-_29046300_29048200
m54284U_201201_044215/80807710/ccs	chr19	+	5472	31	NIC	ENSMUSG00000024795.12	novel	5564	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_15	72.6510763092254	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAAGGCTCTTAAACT	NA	False	NA	13	True	AATAAA	-24	NA	34899760	34953145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
m54284U_201201_044215/80808203/ccs	chr12	-	193	1	Intergenic	novelGene_6942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACGAGTTATGCTAACA	NA	False	NA	NA	False	NA	NA	NA	117666698	117666505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_117666500_117666700
m54284U_201201_044215/80808496/ccs	chr8	+	2171	12	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	25	junction_2	429.853540308443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8846	False	NA	39	True	AATAAA	-21	NA	120637571	120684299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_120637679_120658587_120658657_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
m54284U_201201_044215/80871882/ccs	chr17	+	1757	5	NNC	ENSMUSG00000034165.17	novel	464	3	NA	NA	-385	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1731.52207248421	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCTCTTGTGATCCCTG	NA	False	NA	NA	False	AATAAA	-15	NA	47904852	47910614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_47905016_47905658_47905875_47908344_47908505_47908927_47909065_47909533
m54284U_201201_044215/80872052/ccs	chr12	+	170	1	Intergenic	novelGene_6855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	101750121	101750291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_101750100_101750300
m54284U_201201_044215/80872120/ccs	chr3	+	1450	1	Intergenic	novelGene_1355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCACAGGCATGGAACT	NA	False	NA	NA	False	AATAAA	-42	NA	15685327	15686777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_15685300_15686800
m54284U_201201_044215/80872610/ccs	chr13	+	2616	4	NIC	ENSMUSG00000035367.10	novel	3594	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	176.305290775846	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAGAATGTTTATA	NA	False	NA	20	True	AATAAA	-33	NA	58550076	58557910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_58550332_58552384_58552470_58554815_58554905_58555723
m54284U_201201_044215/80872708/ccs	chr7	-	3478	7	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	215	junction_6	22.8892259953601	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995909	125982025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125984312_125986573_125986684_125986783_125986929_125989557_125989916_125990442_125990567_125995113_125995187_125995527
m54284U_201201_044215/80873365/ccs	chr11	+	2826	17	NNC	ENSMUSG00000020409.11	novel	3625	16	NA	NA	0	-946	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	73.1481533857827	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGATTTTCGTACACTT	NA	False	NA	14	True	AATAAA	-25	NA	43324570	43337862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_43324647_43327180_43327313_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
m54284U_201201_044215/80938914/ccs	chr4	+	2691	11	NIC	ENSMUSG00000066037.15	novel	21452	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_3	181.929766668349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_136038401_136041397_136041567_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
m54284U_201201_044215/81002620/ccs	chr2	+	2757	8	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1115	junction_3	91.5485819504751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8663	False	NA	NA	False	AATAAA	-16	NA	72306596	72317237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315657_72316063
m54284U_201201_044215/81002973/ccs	chr5	+	1649	4	NNC	ENSMUSG00000034211.15	novel	832	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	356.816790835608	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCAGCTTGATTTT	791	False	NA	23	True	CATAAA	-12	NA	129792597	129795544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_129792614_129792747_129793676_129793790_129793931_129794979
m54284U_201201_044215/81003985/ccs	chr6	-	2819	7	NIC	ENSMUSG00000029922.16	novel	3046	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_4	1528.48450724529	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTTGTGTGATGACCT	NA	False	NA	4	True	AATAAA	-24	NA	39397396	39374737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39382664_39382895_39387021_39387151_39397032
m54284U_201201_044215/81005322/ccs	chr4	+	2270	7	NNC	ENSMUSG00000028737.16	novel	4142	15	NA	NA	18760	0	intron_retention	FALSE	canonical	3	14	junction_1	86.9471423081607	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGATCGTGTGTGTC	5572	False	NA	26	True	NA	NA	NA	139369179	139377001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_139369278_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
m54284U_201201_044215/81005361/ccs	chr8	-	1484	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_4	56.917093702644	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633351	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591838_43593679_43593776_43595725_43595759_43633233
m54284U_201201_044215/81070141/ccs	chr6	+	2502	11	NIC	ENSMUSG00000030204.11	novel	4006	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	485	junction_5	31.3687742827162	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTGTGTGTG	6594	False	NA	16	True	ATTAAA	-16	NA	134988594	135000735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134998542_135000241
m54284U_201201_044215/81070611/ccs	chr2	-	2512	1	FSM	ENSMUSG00000083287.5	ENSMUST00000121574.2	684	1	-52	-1776	-52	1776	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACATCATCTACCATGA	NA	False	NA	NA	False	AATAAA	-35	NA	53586868	53584356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_53584400_53586900
m54284U_201201_044215/81135473/ccs	chr1	-	200	1	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACCAAGTGCACACCTG	NA	False	NA	NA	False	NA	NA	NA	13111360	13111160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_13111200_13111400
m54284U_201201_044215/81199704/ccs	chr19	+	2962	5	NIC	ENSMUSG00000024750.12	novel	7385	6	NA	NA	0	-265	intron_retention	FALSE	canonical	3	349	junction_1	13.0096118312577	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTCTTGTTTATTGGG	NA	False	NA	16	True	AATAAA	-16	NA	21249641	21259389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_21250107_21253789_21254454_21255018_21255123_21256988_21257115_21257786
m54284U_201201_044215/81200154/ccs	chr13	-	190	1	Intergenic	novelGene_6976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGAGAAGGAGAGGGGG	NA	False	NA	NA	False	NA	NA	NA	14777400	14777210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_14777200_14777400
m54284U_201201_044215/81201786/ccs	chr11	-	2069	7	NIC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	0	-59	intron_retention	FALSE	canonical	3	761	junction_3	60.2091262923561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCTGCCTCCAGAGGTG	NA	False	NA	-29	True	AATAAA	-23	NA	115903545	115899341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_115899541_115899628_115899792_115899873_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
m54284U_201201_044215/81265739/ccs	chr19	+	2933	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1016	junction_10	68.3195433240006	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245643	7252590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
m54284U_201201_044215/8126682/ccs	chr12	-	179	1	Intergenic	novelGene_6665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAATAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	59145940	59145761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_59145800_59145900
m54284U_201201_044215/8127025/ccs	chr12	+	3276	16	NNC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_11	141.791615486326	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	736	False	NA	NA	False	ATTAAA	-21	NA	111540956	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595443_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
m54284U_201201_044215/8128715/ccs	chr9	+	917	6	NIC	ENSMUSG00000033543.18	novel	833	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	366.992098007573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919849	69930020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_69919944_69922573_69922693_69923049_69923220_69924100_69924206_69926670_69926798_69929718
m54284U_201201_044215/81333022/ccs	chr15	-	1673	16	NNC	ENSMUSG00000036678.9	novel	1811	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_15	126.968482528364	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259130	102246690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102259000
m54284U_201201_044215/81396751/ccs	chr15	-	11157	35	NIC	ENSMUSG00000016028.12	novel	11305	35	NA	NA	181	0	combination_of_known_junctions	TRUE	canonical	3	21	junction_34	10.511527697384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTGCTGTGCTGGGTGGT	NA	False	NA	-5	True	AATAAA	-21	NA	85918223	85783129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_85784940_85785137_85785400_85785639_85785874_85786315_85786466_85786649_85786754_85787002_85787098_85787486_85787613_85788126_85788254_85789639_85789720_85790115_85790229_85791795_85791971_85800814_85801016_85803109_85803237_85805348_85805517_85806323_85806529_85808258_85808403_85809596_85809781_85810286_85810497_85811131_85811227_85812098_85812201_85812515_85812700_85813601_85813723_85814032_85814175_85814713_85814889_85815442_85815557_85816484_85816671_85822044_85822212_85823302_85823429_85823747_85823912_85825317_85825476_85843328_85843418_85844267_85844384_85847284_85847508_85862802_85863442_85914382
m54284U_201201_044215/81397299/ccs	chr11	-	185	1	Intergenic	novelGene_6168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATGTGGGAGGGGCC	NA	False	NA	-10	True	NA	NA	NA	87226231	87226046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87226000_87226200
m54284U_201201_044215/81397855/ccs	chr15	+	1563	8	NNC	ENSMUSG00000036106.16	novel	1719	9	NA	NA	-6408	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	49.7864828799045	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTCTGCCCCCTGGTG	8462	False	NA	5	True	AATAAA	-15	NA	84547412	84587874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_84547463_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
m54284U_201201_044215/81463071/ccs	chr2	-	4546	6	NIC	ENSMUSG00000078897.11	novel	1659	5	NA	NA	0	2785	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	98.2221970839586	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	False	NA	NA	False	NA	NA	NA	175277600	175261307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_175265399_175266555_175266617_175266821_175266949_175272565_175272668_175273972_175274028_175277490
m54284U_201201_044215/81527332/ccs	chr12	-	3677	20	NNC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	0	-406	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	149.550165755717	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2678	False	NA	-9	True	AATAAA	-18	NA	59058803	59005574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045070_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
m54284U_201201_044215/81527769/ccs	chr6	+	1953	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	276	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	141.343845443047	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5726	False	NA	7	True	AATAAA	-17	NA	83254374	83280734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_83254554_83256945_83257147_83262747_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
m54284U_201201_044215/81529582/ccs	chr5	+	2102	5	NNC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	78	0	intron_retention	FALSE	canonical	2	13	junction_1	1734.95151229076	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTTTTATATTAATG	NA	False	NA	12	True	AATAAA	-22	NA	124678835	124688569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_124679105_124680714_124680821_124681034_124681228_124684958_124685067_124687143
m54284U_201201_044215/81592597/ccs	chr4	+	4687	17	NIC	ENSMUSG00000039953.14	novel	4459	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	455	junction_9	53.3315103855122	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTGGGGTCCATTCT	NA	False	NA	24	True	AATAAA	-19	NA	149670924	149733356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
m54284U_201201_044215/81592933/ccs	chr8	-	188	1	Intergenic	novelGene_4420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACAAAAAGGTCTACACAT	NA	False	NA	NA	False	NA	NA	NA	96523148	96522960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_96523000_96523100
m54284U_201201_044215/81593772/ccs	chr8	+	1184	5	NIC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	0	1286	combination_of_known_junctions	TRUE	canonical	3	14	junction_1	2969.23201350113	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57964940	57967529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_57965040_57965548_57965783_57966095_57966242_57966323_57966499_57966999
m54284U_201201_044215/81658094/ccs	chr17	+	1086	6	NIC	ENSMUSG00000024132.7	novel	1137	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	503	junction_1	25.350345165303	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATAAGGGCTAACCT	4901	False	NA	-6	True	NA	NA	NA	24645675	24658194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
m54284U_201201_044215/81659886/ccs	chr15	+	3339	4	NIC	ENSMUSG00000022400.10	novel	1675	5	NA	NA	0	-125	intron_retention	FALSE	canonical	3	4160	junction_1	266.857015397135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGTTGCTGTTTCATGTA	NA	False	NA	15	True	AATAAA	-15	NA	81350544	81359462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81350652_81352355_81352435_81355152_81358130_81359286
m54284U_201201_044215/81660532/ccs	chr7	+	166	1	Intergenic	novelGene_3632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGTTTTTTTCA	5836	False	NA	NA	False	NA	NA	NA	4776873	4777039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_4776900_4777000
m54284U_201201_044215/81724942/ccs	chr14	-	5734	30	Intergenic	novelGene_7336	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_16	18.48700414441	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTATGTGGACAGTGTGT	NA	False	NA	-1	True	AATAAA	-29	NA	10916241	10231200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10290412_10290500_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877_10517058_10748553_10748659_10915440
m54284U_201201_044215/81725991/ccs	chr17	+	868	4	NNC	ENSMUSG00000023904.11	novel	693	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	146.645453011298	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTCAGCAGCCTTTGG	NA	False	NA	11	True	AATAAA	-19	NA	23892569	23894201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_23892865_23892942_23893043_23893520_23893650_23893857
m54284U_201201_044215/81726010/ccs	chr8	+	2559	17	NNC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	61.7469318569757	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792246	123824494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800490_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
m54284U_201201_044215/81789047/ccs	chr13	+	7854	24	NIC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	0	-1705	combination_of_known_junctions	FALSE	canonical	3	116	junction_1	35.0361951650663	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGGGCTCTCAAGGCT	NA	False	NA	57	True	NA	NA	NA	55359631	55461863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
m54284U_201201_044215/81789307/ccs	chr8	+	167	1	Intergenic	novelGene_4572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAGAAAGAAAACCA	NA	False	NA	NA	False	NA	NA	NA	123570659	123570826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_123570700_123570800
m54284U_201201_044215/81790387/ccs	chr17	-	4945	13	NIC	ENSMUSG00000037098.19	novel	5383	15	NA	NA	0	-258	combination_of_known_splicesites	FALSE	canonical	3	10	junction_8	27.4634858595109	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATACTGGAGCCCCGCCT	NA	False	NA	NA	False	NA	NA	NA	26288519	26208276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
m54284U_201201_044215/81790505/ccs	chr2	+	4966	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_7	65.2748592969439	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4592	False	NA	12	True	AATAAA	-16	NA	18069396	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069676_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201201_044215/81856077/ccs	chr6	+	1280	10	NNC	ENSMUSG00000034744.14	novel	1405	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	77.5253045108897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGGTGTCATCTTCCATA	9484	False	NA	13	True	AATAAA	-21	NA	83772189	83779538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_83772265_83773888_83774075_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
m54284U_201201_044215/81856986/ccs	chr2	-	1200	12	NIC	ENSMUSG00000039128.14	novel	1827	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	91	junction_9	296.801433468727	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCCTACTGTGATGG	NA	False	NA	-7	True	AATAAA	-15	NA	5849752	5799475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5838466_5838525_5846763_5846836_5849645
m54284U_201201_044215/81920376/ccs	chr5	-	4997	5	NIC	ENSMUSG00000049606.17	novel	5785	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_4	36.9188298839495	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGCCTCTAATGTGAAAC	NA	False	NA	-16	True	AATAAA	-17	NA	106844516	106764606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_106766295_106767405_106767509_106783475_106786502_106814650_106814712_106844397
m54284U_201201_044215/81920798/ccs	chrX	+	193	1	Intergenic	novelGene_9702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGATTAACCTAAAAATA	9777	False	NA	NA	False	NA	NA	NA	158258550	158258743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_158258600_158258700
m54284U_201201_044215/81921846/ccs	chr14	-	5769	7	NIC	ENSMUSG00000021273.12	novel	2860	8	NA	NA	0	-1250	intron_retention	FALSE	canonical	3	738	junction_3	61.5214506403164	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTCCTTGTCTTTCTCAT	4307	False	NA	-34	True	AATAGA	-13	NA	63415246	63383851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63400935_63401980_63402079_63415131
m54284U_201201_044215/8194132/ccs	chr7	-	1174	3	NIC	ENSMUSG00000050708.17	novel	968	4	NA	NA	0	0	intron_retention	TRUE	canonical	3	69387	junction_1	2507	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTGTTTTTTCTATATA	NA	False	NA	-19	True	AATAAA	-17	NA	45109263	45107367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45108085_45108507_45108655_45108953
m54284U_201201_044215/81986123/ccs	chr11	-	189	1	Intergenic	novelGene_6515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTGCTGGGATTAAAG	6820	False	NA	NA	False	NA	NA	NA	120460626	120460437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_120460400_120460600
m54284U_201201_044215/82119489/ccs	chr2	+	1974	10	NIC	ENSMUSG00000027091.15	novel	2111	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	256.461004664608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGGCCTTTTTCTTTTA	NA	False	NA	28	True	AATAAA	-36	NA	83474880	83494966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488931_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
m54284U_201201_044215/82182716/ccs	chr3	-	912	11	NNC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_6	647.55170449934	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642467	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639602_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
m54284U_201201_044215/82248426/ccs	chr8	-	172	1	Intergenic	novelGene_4312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTTGGTAATGCTATT	NA	False	NA	NA	False	NA	NA	NA	69644579	69644407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_69644400_69644600
m54284U_201201_044215/82249177/ccs	chr4	-	2052	4	NNC	ENSMUSG00000078626.3	novel	951	4	NA	NA	9758	1205	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	5.43650214343336	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTGTTTGTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	101828488	101823444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_101824980_101825125_101825438_101827043_101827123_101828362
m54284U_201201_044215/82315228/ccs	chr5	-	1700	9	NIC	ENSMUSG00000033434.16	novel	1617	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_8	32.0497659897853	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGGCCTGGTTTTGTATA	NA	False	NA	-7	True	ATTAAA	-25	NA	110256063	110251843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254807_110254925_110255064_110255721
m54284U_201201_044215/82315308/ccs	chr11	-	2445	15	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	0	2388	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	36.7548414137095	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACCATCAGGGGACCC	2374	False	NA	-15	True	AATAAA	-17	NA	98041229	97979528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
m54284U_201201_044215/82379231/ccs	chr9	+	3595	9	NIC	ENSMUSG00000011958.18	novel	2328	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	219	junction_8	27.3404462289846	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	False	NA	17	True	AATAAA	-17	NA	69896785	69915537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69910748_69910850_69910950_69914345
m54284U_201201_044215/82380888/ccs	chr7	+	4007	13	NNC	ENSMUSG00000031015.9	novel	4027	12	NA	NA	0	-68	intron_retention	FALSE	canonical	2	7	junction_2	120.550905568284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTTCTATTTTTTT	NA	False	NA	9	True	ATTAAA	-16	NA	109820938	109882645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109821117_109824877_109824947_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
m54284U_201201_044215/82445395/ccs	chr7	+	777	8	NIC	ENSMUSG00000030672.13	novel	653	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_2	781.490099431979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCAATTTCAGTGTG	242	False	NA	32	True	AATAAA	-24	NA	126808061	126813460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_126808124_126808455_126808571_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
m54284U_201201_044215/82446175/ccs	chr12	+	2929	12	NIC	ENSMUSG00000020571.14	novel	2125	13	NA	NA	0	-405	intron_retention	FALSE	canonical	3	2590	junction_5	184.09200897539	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAATGCTGATAAATGTA	NA	False	NA	9	True	AATAAA	-11	NA	17316595	17334366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
m54284U_201201_044215/82512363/ccs	chr1	+	2095	9	NIC	ENSMUSG00000052423.16	novel	2098	9	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	1	46	junction_1	80.4478674359986	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGTGATTTCTGCAT	NA	False	NA	16	True	AATAAA	-16	NA	171097908	171104469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171097985_171098152_171098260_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
m54284U_201201_044215/82575907/ccs	chr18	-	175	1	Intergenic	novelGene_8943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43241427	43241252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_43241300_43241400
m54284U_201201_044215/8257647/ccs	chrX	-	180	1	Intergenic	novelGene_9666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGGCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	149997192	149997012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_149997000_149997200
m54284U_201201_044215/8257782/ccs	chr6	-	3445	23	NNC	ENSMUSG00000063884.7	novel	2581	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	774	junction_15	86.7203756548541	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
m54284U_201201_044215/82578124/ccs	chr19	+	4124	19	NIC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	621	junction_4	65.1595383048312	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTTGTTTCCCTCA	8615	False	NA	47	True	GATAAA	-26	NA	8734482	8748286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
m54284U_201201_044215/8259732/ccs	chrX	+	2546	10	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	160.029472594161	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTCTATTCTGTGTGGG	NA	False	NA	10	True	AATAAA	-22	NA	7708320	7741529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740468
m54284U_201201_044215/82708122/ccs	chr5	+	1579	12	NNC	ENSMUSG00000023104.10	novel	4995	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	502.73133320734	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCTATGCTTAATTGC	NA	False	NA	19	True	GATAAA	-15	NA	134611610	134627182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619491_134619620_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
m54284U_201201_044215/82708869/ccs	chr3	+	2545	13	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	36.1711786740032	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161602	90171432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_90161866_90164423_90164526_90164601_90164719_90165771_90165834_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
m54284U_201201_044215/82772639/ccs	chr13	+	2409	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	166.929262518012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_59733274_59733966_59734096_59743162_59743197_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201201_044215/82774625/ccs	chr12	-	3407	7	NIC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	11114	junction_3	1766.59893738097	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662723	110657461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110658084_110658547_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
m54284U_201201_044215/82839979/ccs	chr3	+	2281	15	NNC	ENSMUSG00000028256.17	novel	2564	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_3	24.2331363624105	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGTATAAGTTTTAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	144824348	144859656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_144824548_144829971_144830137_144831853_144831987_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
m54284U_201201_044215/82903144/ccs	chr1	-	1556	14	NNC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	0	-1271	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_13	258.761113016364	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGGGTCTTGTCTTAA	NA	False	NA	-18	True	AATGAA	-19	NA	60137284	60117297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137205
m54284U_201201_044215/82970481/ccs	chr3	-	1694	13	NIC	ENSMUSG00000068921.15	novel	1409	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_12	245.456151322843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTATTGGATTTGCAA	NA	False	NA	-7	True	ATTAAA	-17	NA	88858488	88830941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88858175
m54284U_201201_044215/82970649/ccs	chr2	-	5091	5	NIC	ENSMUSG00000036093.8	novel	5239	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_3	166.191719107782	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTTGGGGGTTTTTG	4755	False	NA	-3	True	AATAAA	-22	NA	52314913	52287962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_52292445_52294917_52295070_52302073_52302158_52306647_52306709_52314601
m54284U_201201_044215/83034956/ccs	chr11	+	3757	24	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	31.3266828534579	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGTTTTAAGTA	NA	False	NA	25	True	AATAAA	-33	NA	84771135	84801957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
m54284U_201201_044215/83036760/ccs	chr2	-	3658	17	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	533	junction_15	609.178336855268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTGCTCATTATCCC	NA	False	NA	0	True	AATAAA	-15	NA	156022158	155989859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156020873_156021096_156021161_156021806
m54284U_201201_044215/83230936/ccs	chrX	-	2271	6	NIC	ENSMUSG00000073139.10	novel	2429	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_3	103.207364078345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510810_69513723_69513901_69520583
m54284U_201201_044215/83231559/ccs	chr8	+	7355	42	NIC	ENSMUSG00000004677.18	novel	7297	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	39.0065813022616	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725357	71813357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801546_71801578_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
m54284U_201201_044215/83232303/ccs	chr5	+	4110	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	3	182	junction_1	547.456177850489	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108221172_108221321_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/8323677/ccs	chr15	-	2901	6	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	172.221485303083	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79855069
m54284U_201201_044215/8324252/ccs	chr2	-	2757	8	NIC	ENSMUSG00000026851.10	novel	1984	9	NA	NA	0	-659	intron_retention	FALSE	canonical	3	354	junction_3	15.6973935182025	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCCTGTCTTCTAATGT	NA	False	NA	NA	False	ATTAAA	-14	NA	30871953	30862847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30871555_30871789
m54284U_201201_044215/8324343/ccs	chr14	+	2445	16	NNC	ENSMUSG00000021866.16	novel	2394	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	139.082165962746	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTGCCAGCATGTTT	2	True	NA	26	True	AATAAA	-34	NA	25842606	25887228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_25842720_25843130_25843209_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
m54284U_201201_044215/8324399/ccs	chr2	-	3038	20	NIC	ENSMUSG00000074796.11	novel	3196	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_19	27.8455375458768	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCGCCCTCCCTGG	NA	False	NA	-1	True	AATAAA	-22	NA	130539389	130526032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130539278
m54284U_201201_044215/83298306/ccs	chr2	+	2204	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1876	junction_8	240.71859088986	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
m54284U_201201_044215/83298811/ccs	chr14	-	220	1	Intergenic	novelGene_7411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGCTCTGATGGATAAA	5515	False	NA	NA	False	NA	NA	NA	45383289	45383069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_45383100_45383300
m54284U_201201_044215/83427561/ccs	chr6	+	1703	5	NIC	ENSMUSG00000029836.16	novel	1889	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	857.921725741923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447642	51460684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_51447720_51452210_51452354_51455417_51455581_51458703_51458799_51459459
m54284U_201201_044215/83427622/ccs	chr12	+	2706	7	NIC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	188	junction_5	23.7533623350932	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258149	8335759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
m54284U_201201_044215/83558754/ccs	chr2	+	3380	21	NNC	ENSMUSG00000027624.21	novel	820	5	NA	NA	11887	857	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	33.6114191905073	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAATTACCTGACTG	NA	False	NA	22	True	AATAAA	-32	NA	156274918	156382763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_156275015_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
m54284U_201201_044215/83561027/ccs	chr17	-	181	1	Intergenic	novelGene_8766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATAACCCATGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	85349441	85349260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_85349300_85349400
m54284U_201201_044215/83624477/ccs	chr14	+	6936	20	NIC	ENSMUSG00000021806.5	novel	4876	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	1309	junction_14	132.951118836962	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGTCTAAATATCTAT	NA	False	NA	24	True	AATAAA	-16	NA	19801351	19861855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
m54284U_201201_044215/83624509/ccs	chr10	+	3501	13	NIC	ENSMUSG00000019843.15	novel	3528	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	33.9276190342519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATTTGTGTACA	NA	False	NA	NA	False	ATTAAA	-30	NA	39245759	39441377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_39246187_39271000_39271041_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
m54284U_201201_044215/83624752/ccs	chr13	-	3147	29	NIC	ENSMUSG00000021357.15	novel	4375	29	NA	NA	0	-1182	combination_of_known_splicesites	FALSE	canonical	3	18	junction_28	35.6224533640437	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGTCCTGAAAGGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	31158051	30999083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31157978
m54284U_201201_044215/83625484/ccs	chr4	-	4673	29	NNC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_8	61.3518104285207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376067	140241795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279281_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
m54284U_201201_044215/83625502/ccs	chr14	-	1808	14	NIC	ENSMUSG00000021814.18	novel	2904	14	NA	NA	0	361	combination_of_known_junctions	FALSE	canonical	1	1	junction_13	334.535074358925	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTTTAATGTTAAAAGA	8170	False	NA	-18	True	AATAAA	-19	NA	20530009	20506235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529351_20529409_20529962
m54284U_201201_044215/83625854/ccs	chr12	+	2406	15	NIC	ENSMUSG00000021288.20	novel	2272	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	31	junction_13	45.6198242800971	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTTGTGTCTGTCT	NA	False	NA	11	True	AATAAA	-15	NA	111725282	111761331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111760082_111760134_111760770
m54284U_201201_044215/83691434/ccs	chr2	-	198	1	Intergenic	novelGene_1009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACATAGAGGGACCATCA	6406	False	NA	NA	False	NA	NA	NA	119659745	119659547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_119659500_119659700
m54284U_201201_044215/83691534/ccs	chr15	+	3477	22	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_18	60.8888806130719	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775629	57833463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57831304_57831401_57833119
m54284U_201201_044215/83691876/ccs	chr14	-	176	1	Intergenic	novelGene_7393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	34122613	34122437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_34122400_34122600
m54284U_201201_044215/83755260/ccs	chr11	-	2886	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	245.457735669504	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678472	54608281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54678385
m54284U_201201_044215/83756937/ccs	chr3	-	4835	5	NIC	ENSMUSG00000027506.16	novel	3081	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	1158.84015291152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	NA	False	NA	-28	True	AATAAA	-15	NA	9069538	8994657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_8996235_9000051_9000101_9009670_9012690_9018743_9018860_9069464
m54284U_201201_044215/83821958/ccs	chr19	-	1915	6	NNC	ENSMUSG00000049670.10	novel	1800	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_4	34.0258725090188	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTGTTATGAACTTT	4140	False	NA	-3	True	AATAAA	-21	NA	42074796	42063380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42067100_42067216_42074635
m54284U_201201_044215/83823344/ccs	chr9	+	1950	7	NIC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_2	619.431997881931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATTTTTGCTTCTA	NA	False	NA	16	True	AATAAA	-16	NA	65537840	65567810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_65538180_65556630_65556709_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
m54284U_201201_044215/8388746/ccs	chr11	+	2433	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26187	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	21.9696760710454	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAAGCACTGTTGTTC	1712	False	NA	1	True	AATAAA	-12	NA	32564781	32574587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_32564811_32565780_32565907_32567848_32567963_32572423
m54284U_201201_044215/83887472/ccs	chr14	-	2047	11	Intergenic	novelGene_7335	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_10	26.6842650264158	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTGGACAGTGTGTGT	NA	False	NA	1	True	AATAAA	-31	NA	10259115	10231198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10259088
m54284U_201201_044215/8389425/ccs	chr13	+	2751	7	NIC	ENSMUSG00000021532.12	novel	2501	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	59.418478233253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTGTACTCTTGTTAC	NA	False	NA	NA	False	AATAAA	-14	NA	68730381	68740457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_68730718_68731657_68733122_68733296_68733383_68735778_68735954_68737341_68737509_68738224_68738340_68740049
m54284U_201201_044215/8389852/ccs	chr16	-	5689	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	10.9857862713599	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800154	43785395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799982
m54284U_201201_044215/83952980/ccs	chr2	-	3289	9	NIC	ENSMUSG00000025781.15	novel	1735	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	4129	junction_1	202.240535934318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTCTCATTATTAATAAT	9570	False	NA	-2	True	AATAAA	-19	NA	10085255	10060840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_10060973_10061580_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
m54284U_201201_044215/83954398/ccs	chr13	-	2655	4	Genic_Genomic	ENSMUSG00000091347.3	novel	255	1	NA	NA	-16544	1484	multi-exon	FALSE	canonical	3	41	junction_2	29.4542960458327	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	9943	False	NA	-2	True	NA	NA	NA	66391931	66373648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_-_66375998_66384209_66384271_66384471_66384599_66391813
m54284U_201201_044215/84018051/ccs	chr13	+	1299	3	NNC	ENSMUSG00000021591.9	novel	1345	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	128	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTTGTCCGGTTCTGT	NA	False	NA	30	True	ATTAAA	-22	NA	75988028	75998270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_75988295_75995288_75995418_75997366
m54284U_201201_044215/84018200/ccs	chr13	-	210	1	Intergenic	novelGene_7062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAGTAATCACAGCAAC	NA	False	NA	NA	False	NA	NA	NA	49721912	49721702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_49721700_49721900
m54284U_201201_044215/84082883/ccs	chr10	-	193	1	Intergenic	novelGene_5507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACGGTGTGTCATCTCA	NA	False	NA	NA	False	NA	NA	NA	93955783	93955590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_93955600_93955800
m54284U_201201_044215/84083487/ccs	chr16	+	6522	9	NIC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	222	0	intron_retention	FALSE	canonical	3	317	junction_1	105.718967077814	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84632233	84660667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
m54284U_201201_044215/84148592/ccs	chr15	-	178	1	Intergenic	novelGene_7675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	35363510	35363332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_35363300_35363500
m54284U_201201_044215/84149301/ccs	chr10	+	2757	11	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-136	0	intron_retention	FALSE	canonical	3	537	junction_4	60.2514730110393	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTGGGCTTTACCA	NA	False	NA	17	True	GGGGCT	-44	NA	80458535	80476583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475498_80475601_80475709_80475855
m54284U_201201_044215/84149623/ccs	chr17	+	7335	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_28	84.1601342667173	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
m54284U_201201_044215/84149641/ccs	chr9	-	1704	5	ISM	ENSMUSG00000032589.15	ENSMUST00000124763.2	7496	8	5527	2552	5527	-2552	3prime_fragment	TRUE	canonical	3	14	junction_1	4.12310562561766	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGGAGTTAATTGCAAACA	3830	False	NA	NA	False	AATAAA	-15	NA	107982085	107975773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984
m54284U_201201_044215/84214159/ccs	chr6	-	205	1	Intergenic	novelGene_3583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTAATTTTTGATGAG	9179	False	NA	NA	False	NA	NA	NA	148822292	148822087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148822100_148822300
m54284U_201201_044215/84215411/ccs	chr3	-	2436	18	NNC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_14	178.319956596045	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662195	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658149_95658292_95658817_95658943_95660318_95660443_95661630_95661828_95662069
m54284U_201201_044215/84216025/ccs	chr14	+	2054	1	NIC	ENSMUSG00000053253.17	novel	2532	8	NA	NA	12272	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCCTCGTTTAGTGATT	NA	False	NA	6	True	AATAAA	-16	NA	105544251	105546305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_105544300_105546300
m54284U_201201_044215/84279862/ccs	chr17	-	3421	7	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	274	1843	multi-exon	FALSE	canonical	3	28	junction_4	72.6934201515745	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGGGTATTGATTGT	NA	False	NA	-2	True	NA	NA	NA	37299663	37278243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr17_-_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37298307_37298416_37298546_37298823_37299396
m54284U_201201_044215/84279897/ccs	chr18	-	3462	8	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_5	74.3052172200745	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70601589_70602573_70602849_70604743_70605051_70605361
m54284U_201201_044215/84280616/ccs	chr7	+	4023	22	Fusion	ENSMUSG00000030513.15_ENSMUSG00000108793.2	novel	619	7	NA	NA	0	0	multi-exon	FALSE	canonical	1	3	junction_1	40.8302164574683	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGCCAGTGGGTGAA	NA	False	NA	61	True	AATAAA	-13	NA	65511481	65700134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_+_65511515_65559949_65560055_65576941_65577047_65577563_65577708_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460_65633598_65674975_65675156_65675313_65675353_65681496_65681600_65683497_65683695_65684928_65685017_65688728_65688833_65693262_65693393_65697304_65697418_65698653
m54284U_201201_044215/84280815/ccs	chr9	-	3980	16	NIC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	219.891023514427	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526585	108480145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108482353_108482532_108482672_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
m54284U_201201_044215/84347670/ccs	chr5	-	208	1	Intergenic	novelGene_2692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAGAGACCTCGAGCT	NA	False	NA	NA	False	NA	NA	NA	100431959	100431751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_100431800_100432000
m54284U_201201_044215/84411182/ccs	chr15	+	1995	20	NIC	ENSMUSG00000008690.16	novel	3255	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	320.159906376438	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTGCTACCCCACCT	NA	False	NA	-2	True	NA	NA	NA	89239965	89255766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_89240130_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
m54284U_201201_044215/84411255/ccs	chr17	+	4689	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_23	44.7159909738258	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
m54284U_201201_044215/84476575/ccs	chrX	+	2191	11	NNC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	0	18249	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	82.4209318073995	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAACAACTGAATGA	3176	False	NA	NA	False	NA	NA	NA	151922976	151973188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151972527
m54284U_201201_044215/84476960/ccs	chr9	-	6269	23	NIC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	54	0	intron_retention	FALSE	canonical	3	398	junction_4	55.7037062731196	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7237	False	NA	-3	True	AATAAA	-20	NA	22300430	22243307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
m54284U_201201_044215/84542116/ccs	chr1	+	1649	12	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	122	junction_1	49.3965234497897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGACTCCTACTTGCGC	NA	False	NA	18	True	AATAAA	-22	NA	75412625	75419823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418676_75418828_75418922_75419087_75419257_75419544
m54284U_201201_044215/8454259/ccs	chrX	+	2198	19	NIC	ENSMUSG00000031360.15	novel	1665	15	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	23	junction_1	48.2283982220199	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGGGCCCGGCAGAAAGT	NA	False	NA	11	True	ATTAAA	-17	NA	161684240	161814315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_161684391_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
m54284U_201201_044215/84543989/ccs	chr7	-	219	1	Intergenic	novelGene_4118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCATTTTCCCATCACA	NA	False	NA	NA	False	NA	NA	NA	129781974	129781755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_129781800_129782000
m54284U_201201_044215/84544115/ccs	chr1	+	1392	8	NIC	ENSMUSG00000053332.14	novel	1066	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3085	junction_4	1035.56152568034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160864150_160864389_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201201_044215/8454804/ccs	chr14	-	702	1	FSM	ENSMUSG00000062081.7	ENSMUST00000180532.2	378	1	-59	-265	-59	265	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCAGGAGGAGAAGGGAG	NA	False	NA	NA	False	AATAAA	-42	NA	48317268	48316566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_48316600_48317300
m54284U_201201_044215/8456798/ccs	chr2	+	2142	3	NNC	ENSMUSG00000039138.2	novel	737	3	NA	NA	0	2466	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	26.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTGCAT	NA	False	NA	9	True	NA	NA	NA	179056728	179061141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_179056894_179057552_179057714_179059325
m54284U_201201_044215/84607069/ccs	chr9	+	2392	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_2	6450.55656513452	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_40712645_40713213_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
m54284U_201201_044215/84608409/ccs	chr4	-	172	1	Intergenic	novelGene_2274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAAATAAGAACA	2270	False	NA	NA	False	NA	NA	NA	137740159	137739987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_137740000_137740200
m54284U_201201_044215/84672529/ccs	chr6	+	2316	18	NIC	ENSMUSG00000030269.15	novel	2676	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_17	76.4492277859348	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	1976	False	NA	13	True	AATAAA	-14	NA	113214811	113258157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
m54284U_201201_044215/84673147/ccs	chr5	-	4796	25	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_24	132.962609614717	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493013	65419194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492818
m54284U_201201_044215/84673211/ccs	chr7	+	111	1	Intergenic	novelGene_3640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTCTTATATTTTGGT	1364	False	NA	NA	False	NA	NA	NA	6364688	6364799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_6364700_6364800
m54284U_201201_044215/84674193/ccs	chr9	-	2702	19	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-137	combination_of_known_splicesites	FALSE	canonical	3	267	junction_4	76.1876338755546	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGTTGTTGGTTTG	NA	False	NA	-14	True	TATAAA	-16	NA	114469252	114415170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
m54284U_201201_044215/84675092/ccs	chr14	+	7979	32	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	52.4439743674197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8247	False	NA	14	True	AATAAA	-21	NA	30741126	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30744676_30744817_30745023_30745128_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
m54284U_201201_044215/84738464/ccs	chr1	+	5878	21	NIC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	377	junction_4	52.1876182633391	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9370	False	NA	19	True	AATAAA	-20	NA	87603960	87648229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87643036_87645411_87646007_87647042
m54284U_201201_044215/84803903/ccs	chr17	-	2426	14	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	517.085002111146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5740	False	NA	-8	True	AATAAA	-13	NA	33904393	33865212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33896247_33896415_33904240
m54284U_201201_044215/84804285/ccs	chr13	+	6470	45	NNC	ENSMUSG00000033991.10	novel	6976	45	NA	NA	56	-179	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	42.0175275803675	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACTCAGTATTTCAT	NA	False	NA	5	True	ATTAAA	-17	NA	76246908	76338046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259852_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
m54284U_201201_044215/84805253/ccs	chr2	+	3983	18	NIC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	96.2776406183958	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3593	False	NA	6	True	ATTAAA	-20	NA	126549279	126601217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_126549408_126559914_126560085_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
m54284U_201201_044215/84869357/ccs	chr1	+	6333	20	NIC	ENSMUSG00000043019.13	novel	6327	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_15	34.8339949218585	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTAGTTTTAAATTTCAA	NA	False	NA	7	True	AATAAA	-16	NA	151631121	151697802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681597_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
m54284U_201201_044215/84870596/ccs	chr11	-	3717	26	NIC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	22	junction_24	52.2038466015676	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120992	102086572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102115559_102115782_102120830
m54284U_201201_044215/84871147/ccs	chr5	-	3724	21	NNC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	0	-1969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	232.035428329383	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996393	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986482_27988727_27988772_27993640_27993776_27996196
m54284U_201201_044215/84935093/ccs	chr5	-	2229	6	NIC	ENSMUSG00000029328.16	novel	2374	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	151	junction_1	349.641759519655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100186754	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
m54284U_201201_044215/84937300/ccs	chr11	-	2071	9	NIC	ENSMUSG00000038517.16	novel	2173	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	14.945212444124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTTGATTCCGACTC	6084	False	NA	-10	True	ATTAAA	-15	NA	97042321	97029231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97030161_97030297_97030417_97037125_97037188_97037280_97037457_97038198_97038380_97039454_97039560_97039770_97039894_97040187_97040442_97042199
m54284U_201201_044215/85065743/ccs	chr5	-	1170	7	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	0	250	at_least_one_novel_splicesite	FALSE	canonical	2	147	junction_1	646.59355256778	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGGGCCTCTCTTTCCA	NA	False	NA	NA	False	NA	NA	NA	30278615	30265811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_30266126_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
m54284U_201201_044215/85067133/ccs	chr18	+	6811	35	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	19.7669816616964	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCACATTGAATTCCAA	-8	True	NA	22	True	AATAAA	-28	NA	4920539	5119299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_4920875_4971089_4971198_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
m54284U_201201_044215/85067775/ccs	chr5	-	2175	5	NIC	ENSMUSG00000059866.14	novel	1987	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	117	junction_4	10.0623058987491	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGAGCTGGGCTGGA	NA	False	NA	-10	True	AATAAA	-19	NA	34671335	34653430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_34654295_34656523_34657081_34658251_34658342_34660880_34661172_34670962
m54284U_201201_044215/85132723/ccs	chr13	-	170	1	Intergenic	novelGene_6989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGTCTCAAATG	NA	False	NA	NA	False	NA	NA	NA	22128020	22127850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_22127800_22128000
m54284U_201201_044215/85133722/ccs	chr7	-	183	1	Intergenic	novelGene_3921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTCCAGTAAAATGTACA	NA	False	NA	NA	False	NA	NA	NA	80355720	80355537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_80355500_80355700
m54284U_201201_044215/85196823/ccs	chr17	-	178	1	Intergenic	novelGene_8435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAATAGGAA	NA	False	NA	NA	False	NA	NA	NA	26894793	26894615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26894600_26894800
m54284U_201201_044215/85199481/ccs	chr9	+	2472	17	NIC	ENSMUSG00000056267.15	novel	2606	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	75.3706466404528	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTGTCCCTAGTGACT	NA	False	NA	18	True	AATAAA	-23	NA	99125505	99182457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_99125544_99128319_99128420_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
m54284U_201201_044215/852086/ccs	chr16	+	2476	10	NIC	ENSMUSG00000039200.17	novel	2778	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	38.5931612953051	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTTTTACTGTCTTTTA	NA	False	NA	7	True	AATAAA	-15	NA	10010810	10060915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_10010890_10019163_10019319_10022467_10022587_10026997_10027133_10028868_10028968_10030516_10030678_10052181_10052256_10054021_10054084_10058424_10058511_10059409
m54284U_201201_044215/8520922/ccs	chr6	+	3224	16	NNC	ENSMUSG00000030213.13	novel	8059	15	NA	NA	0	-1255	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	54.9332524271249	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCCTTCCCTGAACAAT	7092	False	NA	6	True	AATAAA	-14	NA	136495843	136584062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_136495962_136536761_136536986_136537978_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
m54284U_201201_044215/8522342/ccs	chr11	-	179	1	Intergenic	novelGene_5691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATGTAAATACATAAGT	3128	False	NA	-2	True	NA	NA	NA	6364008	6363829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_6363800_6364000
m54284U_201201_044215/853829/ccs	chr3	+	2089	5	NIC	ENSMUSG00000037661.15	novel	754	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	77.9947914927657	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910098	30951341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30948277_30948390_30949858
m54284U_201201_044215/85395911/ccs	chr7	-	210	1	Intergenic	novelGene_3958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTCACCTGGGAAACT	NA	False	NA	NA	False	NA	NA	NA	97830097	97829887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_97829900_97830100
m54284U_201201_044215/85396202/ccs	chr4	-	985	8	NIC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-737	combination_of_known_junctions	FALSE	canonical	3	91	junction_7	617.350990035619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTCTTTTTAAGA	NA	False	NA	-16	True	CATAAA	-19	NA	155170828	155159303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155167565_155167694_155170661
m54284U_201201_044215/85461502/ccs	chr9	-	2887	5	NNC	ENSMUSG00000036867.8	novel	2971	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	16.7779617355625	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTCTTTCTTACAAA	NA	False	NA	NA	False	AATAAA	-15	NA	63929341	63860357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486_63928830_63928913
m54284U_201201_044215/85461765/ccs	chr15	+	217	1	Intergenic	novelGene_7798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAACTAGTGAGGATTTC	NA	False	NA	NA	False	NA	NA	NA	77769970	77770187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_77770000_77770200
m54284U_201201_044215/854868/ccs	chr4	+	1195	7	NIC	ENSMUSG00000006392.17	novel	1145	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	232.491337950949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266562	118272308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_118266584_118268081_118268201_118268854_118269050_118269548_118269690_118269860_118269943_118270823_118271073_118271920
m54284U_201201_044215/85524690/ccs	chr9	+	2562	23	NIC	ENSMUSG00000025237.17	novel	2709	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	12.3533546820621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATCACTGTGGTCTGAC	NA	False	NA	29	True	AATAAA	-23	NA	59524643	59557568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59556112_59556193_59556572_59556637_59556801_59556887_59557206
m54284U_201201_044215/85524722/ccs	chr11	+	1233	11	NIC	ENSMUSG00000017781.18	novel	1665	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	204.812109017021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGATCCTCTAAGATAC	NA	False	NA	22	True	TATAAA	-16	NA	75478944	75517132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
m54284U_201201_044215/85525313/ccs	chr3	-	175	1	Intergenic	novelGene_1690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	133298964	133298789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_133298800_133299000
m54284U_201201_044215/85525438/ccs	chr13	-	2143	16	NIC	ENSMUSG00000021494.10	novel	2199	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	642	junction_9	44.9204729370572	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTTCCTCTCTCACC	NA	False	NA	-5	True	ATTAAA	-21	NA	55684334	55678228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683859_55684108_55684220_55684293
m54284U_201201_044215/85525725/ccs	chr4	-	3144	17	NIC	ENSMUSG00000028849.18	novel	3249	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_12	51.2541156884011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150076	126125959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
m54284U_201201_044215/85526481/ccs	chr2	-	4075	13	NIC	ENSMUSG00000027104.19	novel	2396	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	85.1276818797635	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722938	73646863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_73649493_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
m54284U_201201_044215/85590287/ccs	chr5	+	3589	5	NIC	ENSMUSG00000029166.15	novel	1816	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_2	4.49305018890286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGATTTCCTCAATTGA	2319	False	NA	13	True	AATAAA	-13	NA	30972097	31023403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_30972243_31019150_31019279_31019841_31022073_31022158_31022312_31022471
m54284U_201201_044215/85656609/ccs	chr16	-	4259	14	NNC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_13	51.9562856765356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107110	18071811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107027
m54284U_201201_044215/85721122/ccs	chr12	-	810	1	FSM	ENSMUSG00000113137.2	ENSMUST00000220953.2	450	1	-106	-254	-106	254	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTCTTCAAAAAAGGAAAC	NA	False	NA	NA	False	ATTAAA	-27	NA	55115092	55114282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55114300_55115100
m54284U_201201_044215/85722197/ccs	chr12	-	1892	11	NIC	ENSMUSG00000021266.17	novel	1824	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_1	519.514003661114	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTCACTGTCTGACCA	NA	False	NA	-35	True	AATAAA	-15	NA	108860100	108825959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_108826260_108827194_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
m54284U_201201_044215/85853234/ccs	chr6	+	2106	9	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_8	305.446292333038	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746126	106759435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756252_106758607
m54284U_201201_044215/85854157/ccs	chr13	+	3557	10	NNC	ENSMUSG00000021712.16	novel	3416	11	NA	NA	4474	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	55.184538897533	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGACTGTGACGTATA	NA	False	NA	11	True	AATATA	-25	NA	104320079	104339525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_104320549_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
m54284U_201201_044215/8587566/ccs	chr9	-	185	1	Intergenic	novelGene_4681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGAGGATCAGAAACAGGT	NA	False	NA	NA	False	NA	NA	NA	25800672	25800487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_25800500_25800700
m54284U_201201_044215/85984901/ccs	chr7	+	1731	8	NIC	ENSMUSG00000063229.16	novel	934	7	NA	NA	128	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_1	2902.00629403388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495648	46505051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_46495871_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
m54284U_201201_044215/860/ccs	chr5	-	2219	12	NNC	ENSMUSG00000029111.8	novel	2580	11	NA	NA	0	-263	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	216.940407706512	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCCCACAGAGCTGTGT	NA	False	NA	-10	True	ATTAAA	-17	NA	34093594	34055522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34085642_34085708_34093369
m54284U_201201_044215/86050003/ccs	chr16	-	227	1	Intergenic	novelGene_8089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	15467647	15467420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_15467400_15467600
m54284U_201201_044215/86050651/ccs	chr17	+	842	4	ISM	ENSMUSG00000062638.12	ENSMUST00000080254.7	2113	10	5109	0	4355	0	3prime_fragment	FALSE	canonical	2	4	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGATATCATGGTTGCAC	2768	False	NA	NA	False	GATAAA	-20	NA	34601214	34605002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_34601242_34601435_34601463_34603334_34603362_34604241
m54284U_201201_044215/86114717/ccs	chr12	+	2938	15	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_9	116.631658984819	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102308_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201201_044215/86115165/ccs	chrX	-	2021	5	NIC	ENSMUSG00000023074.12	novel	1782	7	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_1	40.4436336151934	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTTCTCTCTCCGTTC	NA	False	NA	-4	True	CATAAA	-18	NA	52459379	52433474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_52434867_52444532_52444751_52446286_52446363_52446450_52446705_52459298
m54284U_201201_044215/86179917/ccs	chr1	-	1255	7	NIC	ENSMUSG00000026049.12	novel	1272	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_6	127.50348579113	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGTGCCTTTGTTTTAC	NA	False	NA	-3	True	ATTAAA	-17	NA	44141593	44125775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059_44141118_44141487
m54284U_201201_044215/86181218/ccs	chr5	-	985	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	-88	419	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_7	520.057061233453	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047514	25008245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047448
m54284U_201201_044215/86312600/ccs	chr6	+	172	1	Intergenic	novelGene_3102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAAAAAAATTGAC	NA	False	NA	NA	False	NA	NA	NA	5222988	5223160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_5223000_5223200
m54284U_201201_044215/86378300/ccs	chr7	-	169	1	Intergenic	novelGene_4044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAGGAGCCCCA	NA	False	NA	NA	False	NA	NA	NA	116072751	116072582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_116072600_116072800
m54284U_201201_044215/86378766/ccs	chr11	+	4564	1	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	0	-25606	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTACTGTATTCCAAAA	NA	False	NA	NA	False	NA	NA	NA	54413715	54418279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_54413700_54418300
m54284U_201201_044215/86442055/ccs	chr8	-	1919	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_10	64.1737053847596	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578640	106571304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576182_106576257_106576556_106578502
m54284U_201201_044215/86507751/ccs	chr2	-	146	1	Intergenic	novelGene_1065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	129023024	129022878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_129022900_129023000
m54284U_201201_044215/86508412/ccs	chr16	+	5429	32	NNC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_19	398.998006196787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502938_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201201_044215/8651013/ccs	chr4	-	191	1	Intergenic	novelGene_1919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAACAGACAGTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	83434554	83434363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_83434400_83434600
m54284U_201201_044215/8651799/ccs	chr19	-	193	1	Intergenic	novelGene_9217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAGAGAAGAGGCAGGCA	5097	False	NA	NA	False	NA	NA	NA	32677748	32677555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_32677600_32677700
m54284U_201201_044215/8652163/ccs	chr2	+	2551	17	NIC	ENSMUSG00000039205.17	novel	2604	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	18.9868375460475	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCCCCACCAGCACTG	NA	False	NA	8	True	AATAAA	-19	NA	32253072	32268311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32253171_32253816_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
m54284U_201201_044215/8652943/ccs	chr5	-	4412	19	NNC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_13	110.779964873094	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216348	50117297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166745_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
m54284U_201201_044215/86640622/ccs	chr8	-	2615	1	NIC	ENSMUSG00000069895.5	novel	7526	4	NA	NA	0	-1592	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACCCCAGGTTCTCAT	NA	False	NA	NA	False	NA	NA	NA	110464354	110461739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110461700_110464400
m54284U_201201_044215/86641224/ccs	chr8	-	1891	16	NNC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	-332	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_14	852.035481785954	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGCAGTACACTTTGA	NA	False	NA	-2	True	TATAAA	-21	NA	26337722	26307345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329913_26330039_26330104_26337606
m54284U_201201_044215/86704247/ccs	chr9	+	1842	3	ISM	ENSMUSG00000032103.11	ENSMUST00000135768.2	2144	4	871	0	0	0	3prime_fragment	FALSE	canonical	3	88	junction_2	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATATTTGTTCTTTTTC	NA	False	NA	12	True	ATTAAA	-12	NA	35470761	35478434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_35470814_35476079_35477152_35477716
m54284U_201201_044215/86705003/ccs	chr15	+	544	2	NNC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	10969	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57832777	57833463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_57832978_57833119
m54284U_201201_044215/86705257/ccs	chr9	+	5718	19	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	0	-173	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_13	32.2756740565161	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACCAGTTTGGATTTAT	NA	False	NA	7	True	AATAAA	-15	NA	53448346	53485469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474284_53474454_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
m54284U_201201_044215/86705430/ccs	chr9	-	713	4	NNC	ENSMUSG00000060461.6	novel	619	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	3484	junction_1	82858.6360227801	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGTCGTCATTAAAATA	NA	False	NA	NA	False	AATAAA	-24	NA	78275501	78274333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_78274577_78274796_78274849_78275002_78275186_78275266
m54284U_201201_044215/86836688/ccs	chr7	+	183	1	Intergenic	novelGene_3908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAGAGAGAGAGG	1630	False	NA	NA	False	NA	NA	NA	79661866	79662049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79661900_79662000
m54284U_201201_044215/86966894/ccs	chr14	-	3465	30	NNC	ENSMUSG00000002319.17	novel	3846	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_28	95.3179422093	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAGGAAGCAGCTGTG	9798	False	NA	-9	True	AATAAA	-19	NA	55873088	55863178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866529_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
m54284U_201201_044215/86968691/ccs	chr19	-	2099	9	NIC	ENSMUSG00000024640.10	novel	2291	9	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	1098.49447398474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATTGCCTGTGAATTAT	196	False	NA	-14	True	ATTAAA	-20	NA	15924775	15882490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15924648
m54284U_201201_044215/87032255/ccs	chr3	-	2863	5	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	892	junction_2	257.638676250287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416805	90406262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_90407415_90409422_90410590_90413414_90413569_90414851_90414934_90416497
m54284U_201201_044215/87097545/ccs	chr3	+	3098	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_5	454.125288634951	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6111	False	NA	NA	False	AATAAA	-26	NA	88461070	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
m54284U_201201_044215/87163834/ccs	chr7	-	174	1	Intergenic	novelGene_3651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAGCTAGAAAT	NA	False	NA	NA	False	NA	NA	NA	12666332	12666158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_12666200_12666300
m54284U_201201_044215/8717057/ccs	chr17	+	3913	28	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_14	98.9641965990974	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGATTGTTTCAGG	6670	False	NA	20	True	AATAAA	-21	NA	35117444	35133028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
m54284U_201201_044215/8717309/ccs	chr11	+	2115	6	NIC	ENSMUSG00000049811.18	novel	1947	5	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	6.81175454637056	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCCTGACACGGTTTG	NA	False	NA	19	True	AATAAA	-30	NA	22958464	22973741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_22958627_22963538_22963648_22965654_22965885_22969999_22971134_22971493_22971662_22973429
m54284U_201201_044215/8717915/ccs	chr11	-	1632	7	NIC	ENSMUSG00000014606.15	novel	1711	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	687	junction_4	57.3255808712151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTAAAGTCGTAACT	NA	False	NA	0	True	ATTAAA	-28	NA	70537725	70535021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70535748_70535864_70535917_70535995_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
m54284U_201201_044215/8718365/ccs	chr11	+	174	1	Intergenic	novelGene_6228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCCAGAGCGAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	95500473	95500647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95500500_95500600
m54284U_201201_044215/87231184/ccs	chr15	-	1661	2	Genic_Genomic	ENSMUSG00000107344.2	novel	363	1	NA	NA	-5328	630	multi-exon	FALSE	canonical	2	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAGGAGAACCAGAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	12037341	12031020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr15_-_12032054_12036713
m54284U_201201_044215/87294144/ccs	chr18	-	176	1	Intergenic	novelGene_8913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCACAAGA	NA	False	NA	NA	False	NA	NA	NA	36493001	36492825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36492800_36493000
m54284U_201201_044215/87361788/ccs	chr13	+	185	1	Intergenic	novelGene_7261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTACATGTCTGCA	NA	False	NA	NA	False	NA	NA	NA	97281043	97281228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97281000_97281200
m54284U_201201_044215/87427057/ccs	chr4	-	1069	9	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	974.764386595551	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	8929	False	NA	-7	True	AATAAA	-16	NA	43031370	43028025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43028294_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
m54284U_201201_044215/87427208/ccs	chr5	-	5279	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_27	231.647158488217	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957963	110932353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957413
m54284U_201201_044215/87491386/ccs	chr13	-	3413	24	NIC	ENSMUSG00000009470.18	novel	8445	24	NA	NA	0	3019	combination_of_known_junctions	FALSE	canonical	3	224	junction_23	67.7519382879703	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACGAAGCACCCTGTGA	NA	False	NA	-19	True	AATAAA	-15	NA	99027548	98980546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99027434
m54284U_201201_044215/87491402/ccs	chrX	-	4065	1	FSM	ENSMUSG00000084197.2	ENSMUST00000122027.2	526	1	-488	-3051	-488	3051	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCGTGGTGGCACACG	NA	False	NA	NA	False	NA	NA	NA	100753655	100749590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_100749600_100753700
m54284U_201201_044215/87491631/ccs	chr4	+	5103	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	147.35890709421	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/87491984/ccs	chr12	+	3221	10	NIC	ENSMUSG00000097451.12	novel	2746	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	66	junction_7	180.249484169054	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
m54284U_201201_044215/87492154/ccs	chr17	+	7575	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	34	junction_30	84.9919748920202	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119721_14122791_14122877_14124115
m54284U_201201_044215/87556916/ccs	chr2	+	215	1	Intergenic	novelGene_1036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCCAGATTAATCTAG	NA	False	NA	NA	False	GATAAA	-7	NA	121789197	121789412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121789200_121789400
m54284U_201201_044215/87622572/ccs	chrX	-	179	1	Intergenic	novelGene_9685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGTATAAATTTCTCA	NA	False	NA	NA	False	NA	NA	NA	152084857	152084678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_152084700_152084900
m54284U_201201_044215/87622662/ccs	chr16	-	2909	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	417	junction_5	244.836267297011	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAAATTTAATGACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	16176823	16131246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
m54284U_201201_044215/87623811/ccs	chr6	-	2608	20	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_17	211.360085807553	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
m54284U_201201_044215/87688640/ccs	chr19	+	5091	14	NNC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_10	119.266743952444	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045019	46061240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
m54284U_201201_044215/87689333/ccs	chrX	+	2667	10	NIC	ENSMUSG00000015291.11	novel	2666	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	728	junction_6	47.3648825477846	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTCTTTAGGTTCTC	6206	False	NA	15	True	AATAAA	-16	NA	73348861	73355468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
m54284U_201201_044215/87690031/ccs	chr9	-	777	5	NIC	ENSMUSG00000074269.11	novel	883	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_3	258.205828749081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTATCAATGTTTTATT	9050	False	NA	-5	True	AATAAA	-18	NA	58648842	58560160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_58560390_58565039_58565127_58567456_58567655_58619298_58619389_58648669
m54284U_201201_044215/87753683/ccs	chr2	-	1158	6	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	-51	-125	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	901.923721830178	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8886	False	NA	-4	True	AATAAA	-20	NA	132094573	132091206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094309
m54284U_201201_044215/87753757/ccs	chr8	+	1963	10	NNC	ENSMUSG00000024266.9	novel	1926	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	9.71571210608852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTCTGCGTGTTGGGA	4281	False	NA	7	True	AATAAA	-12	NA	120339485	120343663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_120339872_120340833_120340975_120341482_120341531_120341641_120341768_120341850_120342002_120342078_120342247_120342349_120342580_120342671_120342916_120343110_120343269_120343352
m54284U_201201_044215/87754694/ccs	chr18	-	2669	13	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	889	combination_of_known_splicesites	FALSE	canonical	1	4	junction_7	313.041619526151	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784788	34765841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
m54284U_201201_044215/87755576/ccs	chr5	+	411	3	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	1111.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771328	31779986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31771367_31773724_31773832_31779720
m54284U_201201_044215/87818282/ccs	chr9	-	674	5	NIC	ENSMUSG00000097195.11	novel	809	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	461	junction_1	309.579553588411	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404944	88403104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_88403502_88403970_88404029_88404359_88404435_88404536_88404640_88404903
m54284U_201201_044215/87818327/ccs	chr19	-	183	1	Intergenic	novelGene_9280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAGAGGAATAGG	NA	False	NA	NA	False	NA	NA	NA	44311300	44311117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_44311100_44311300
m54284U_201201_044215/8784481/ccs	chr10	+	3855	7	NIC	ENSMUSG00000020020.9	novel	2449	6	NA	NA	0	1332	intron_retention	FALSE	canonical	3	11	junction_1	4.57043640026736	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTACCAAATCTAGCCTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	93669679	93695282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_93669754_93679839_93679914_93681472_93682977_93686011_93686208_93688571_93688681_93691975_93692182_93693590
m54284U_201201_044215/87949989/ccs	chr4	+	1295	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_1	221.525785111774	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407541	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_117407560_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
m54284U_201201_044215/87951744/ccs	chr4	+	2629	11	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	36.7662889070953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	False	NA	64	True	ATTAAA	-15	NA	129355476	129382291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129355499_129355734_129355796_129359022_129359140_129360706_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
m54284U_201201_044215/87951905/ccs	chr18	+	177	1	Intergenic	novelGene_8870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAACAATACTAAGT	NA	False	NA	NA	False	NA	NA	NA	34463632	34463809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_34463600_34463800
m54284U_201201_044215/88014873/ccs	chr17	-	1661	6	NIC	ENSMUSG00000039183.7	novel	1440	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	605	junction_3	58.2113391015874	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	-11	True	AGTAAA	-19	NA	25105312	25101590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25102289_25102779_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
m54284U_201201_044215/88015205/ccs	chr17	-	3388	13	NIC	ENSMUSG00000059811.14	novel	2902	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	105.266988599888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAAGTTGTGATTCTTTTT	3823	False	NA	NA	False	ATTAAA	-21	NA	80203480	80156491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
m54284U_201201_044215/88082596/ccs	chr5	-	156	1	Intergenic	novelGene_2673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1566	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	92528182	92528026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92528000_92528200
m54284U_201201_044215/88082747/ccs	chr7	+	1762	6	NIC	ENSMUSG00000015957.13	novel	1844	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	8.48528137423857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAAGTGTGTGAAATAA	NA	False	NA	NA	False	NA	NA	NA	98484318	98503018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_98484556_98488214_98488398_98495580_98495817_98496380_98496495_98499433_98499727_98502319
m54284U_201201_044215/88146229/ccs	chr10	-	175	1	Intergenic	novelGene_5212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	19807192	19807017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_19807000_19807200
m54284U_201201_044215/88148021/ccs	chr15	+	2466	14	ISM	ENSMUSG00000015365.16	ENSMUST00000146993.8	4133	27	0	43262	0	-11735	5prime_fragment	FALSE	canonical	3	36	junction_13	10.1817797586303	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTTCAAAGTATTATT	2907	False	NA	NA	False	AATAAA	-18	NA	88867111	88896089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565
m54284U_201201_044215/88148587/ccs	chr7	+	2636	31	ISM	ENSMUSG00000037337.12	ENSMUST00000208227.2	2720	32	811	-3	0	0	3prime_fragment	FALSE	canonical	2	9	junction_30	30.0925239885258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGGAGGAGAGATTTTT	NA	False	NA	23	True	AATAAA	-28	NA	28682285	28702704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_28682480_28682639_28682698_28682814_28682906_28683507_28683573_28686072_28686129_28686216_28686265_28686412_28686456_28686539_28686613_28687498_28687631_28688018_28688082_28688179_28688262_28688760_28688875_28689098_28689178_28690412_28690472_28690572_28690617_28690705_28690751_28692614_28692658_28693392_28693556_28693629_28693713_28694889_28694914_28695513_28695599_28697876_28697954_28698037_28698099_28699197_28699307_28699388_28699448_28699615_28699720_28700359_28700535_28701031_28701095_28701173_28701264_28701344_28701416_28702521
m54284U_201201_044215/88211558/ccs	chr17	+	908	5	NIC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	98.3142283700584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	908	False	NA	11	True	AATAAA	-23	NA	24851655	24857811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24851829_24852900_24853140_24854561_24854722_24857397_24857504_24857581
m54284U_201201_044215/88211577/ccs	chr11	-	3898	14	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_13	143.204451023351	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120041805
m54284U_201201_044215/88212491/ccs	chr14	+	165	1	Intergenic	novelGene_7481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGGGCTTTACCACAAC	NA	False	NA	NA	False	NA	NA	NA	56974475	56974640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_56974500_56974600
m54284U_201201_044215/88213028/ccs	chr10	+	2127	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_14	598.289074216244	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309087	111332745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331903
m54284U_201201_044215/88213544/ccs	chr11	-	1854	11	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_2	26.3286915740224	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515825	120509197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120509876_120509974_120510117_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
m54284U_201201_044215/88344717/ccs	chr19	-	1094	6	NIC	ENSMUSG00000024914.17	novel	992	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	999	junction_1	79.504465283404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	5475007	5472854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5473054_5473358_5473448_5473587_5473920_5474209_5474304_5474388_5474462_5474700
m54284U_201201_044215/88410588/ccs	chr4	-	3654	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_20	81.1806011310584	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030_155753188_155753271
m54284U_201201_044215/88410819/ccs	chr16	-	169	1	Intergenic	novelGene_8142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGAATTAAAAATA	7745	False	NA	NA	False	NA	NA	NA	20418648	20418479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20418500_20418600
m54284U_201201_044215/88474772/ccs	chr2	+	1432	10	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_8	312.824409391453	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_5850197_5852931_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
m54284U_201201_044215/8848570/ccs	chr16	-	5850	5	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	11.6054943884352	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800154	43785395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799540_43799821
m54284U_201201_044215/8848616/ccs	chr3	+	1449	4	NIC	ENSMUSG00000050150.17	novel	1407	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	42.1030481873542	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTGTATTCATTG	NA	False	NA	NA	False	NA	NA	NA	135053789	135064067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_135053884_135054090_135054535_135060771_135060833_135063217
m54284U_201201_044215/88539325/ccs	chr2	+	340	1	Intergenic	novelGene_1082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132525836	132526176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_132525800_132526200
m54284U_201201_044215/88539815/ccs	chr17	+	176	1	Intergenic	novelGene_8415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAGAGAGATT	6219	False	NA	NA	False	NA	NA	NA	24706123	24706299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_24706100_24706300
m54284U_201201_044215/88540280/ccs	chr9	-	5345	29	NIC	ENSMUSG00000043987.19	novel	5541	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_18	18.9283018848733	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCCTGTGAGTGTGCT	NA	False	NA	37	True	ATTAAA	-25	NA	45739937	45678243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
m54284U_201201_044215/88540387/ccs	chr11	-	2121	14	NIC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	197.871304777721	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGAGATCTCTAGTG	NA	False	NA	-17	True	AATAAA	-16	NA	120687229	120680027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686764
m54284U_201201_044215/88670575/ccs	chr18	+	3915	18	NIC	ENSMUSG00000117694.2	novel	1515	15	NA	NA	0	3711	combination_of_known_splicesites	FALSE	canonical	3	42	junction_4	422.186760687322	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35686462	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389_35690423_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
m54284U_201201_044215/88673007/ccs	chr8	+	1975	4	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	2963	junction_1	292.068865547532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71126108_71129204_71130527_71130603_71130785_71131009
m54284U_201201_044215/88673115/ccs	chr15	-	4197	10	NIC	ENSMUSG00000023022.15	novel	4243	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_8	306.253384964916	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTGTCCACACTGCT	7238	False	NA	-3	True	AATAAA	-15	NA	99773337	99676350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99741555_99741705_99773213
m54284U_201201_044215/88736445/ccs	chr14	+	2127	10	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_9	498.785413668933	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785766
m54284U_201201_044215/88736602/ccs	chrX	-	1106	9	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	0	-473	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_8	149.667913645511	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336582	72326974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_72327390_72327485_72327591_72328811_72328911_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
m54284U_201201_044215/88737404/ccs	chr14	+	7756	30	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	41.828936499227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8226	False	NA	14	True	AATAAA	-21	NA	30741105	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
m54284U_201201_044215/88737987/ccs	chr7	+	2067	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	349.374997515404	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43896248_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201201_044215/88802439/ccs	chr12	+	4290	20	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_2	144.182728784617	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3981	False	NA	13	True	AATAAA	-13	NA	83679025	83729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
m54284U_201201_044215/88804074/ccs	chr15	-	173	1	Intergenic	novelGene_7637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATAATAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	10604840	10604667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_10604700_10604800
m54284U_201201_044215/88867231/ccs	chr10	-	172	1	Intergenic	novelGene_5415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGGAGAGGGATC	6914	False	NA	-2	True	NA	NA	NA	75791667	75791495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75791500_75791700
m54284U_201201_044215/88932420/ccs	chr19	+	2626	10	NIC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	120.180419924933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043536	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38043766_38045857_38045929_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/88932436/ccs	chr13	-	1360	7	NIC	ENSMUSG00000034789.9	novel	1168	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	458	junction_6	60.0101843208486	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6441	False	NA	-22	True	AATAAA	-14	NA	55469759	55467697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55468028_55468124_55468188_55468315_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
m54284U_201201_044215/88997934/ccs	chr16	-	3233	18	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	92.8940684784422	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540772	17469084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
m54284U_201201_044215/88998460/ccs	chr17	-	1477	6	NIC	ENSMUSG00000067203.9	novel	1052	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.338094023943	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGAGAACCTTCCAGAA	3644	False	NA	NA	False	AATAAA	-5	NA	34197801	34193632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34194054_34194453_34194588_34194714_34194990_34196744_34197021_34197227_34197498_34197700
m54284U_201201_044215/89000404/ccs	chr7	-	5383	4	ISM	ENSMUSG00000053550.14	ENSMUST00000119433.4	3481	5	8299	-2475	-223	0	3prime_fragment	FALSE	canonical	3	5	junction_2	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGCCTCAAGGTTTTC	5607	False	NA	NA	False	AATAAA	-16	NA	4839396	4828550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_4833275_4833757_4833908_4837228_4837384_4839042
m54284U_201201_044215/89063429/ccs	chr1	-	5653	22	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	176	junction_5	39.6466250175655	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCGGTGTGTAGAGGATTT	NA	False	NA	-3	True	ATTAAA	-19	NA	152778397	152712745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
m54284U_201201_044215/89130901/ccs	chr4	-	1441	7	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	277	junction_6	2044.71068994016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994325	150981589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150993648
m54284U_201201_044215/89131099/ccs	chr11	+	1997	14	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_6	355.513163564242	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1634	False	NA	2	True	ATTAAA	-19	NA	120675340	120679928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
m54284U_201201_044215/89194710/ccs	chr19	+	5719	25	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	0	-591	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	191.109984149616	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36811631	36870286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
m54284U_201201_044215/89195484/ccs	chr17	+	3788	26	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	346	junction_1	122.303229720233	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8820	False	NA	32	True	AATAAA	-33	NA	35354485	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201201_044215/89260065/ccs	chrX	-	188	1	Intergenic	novelGene_9522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTACCATAATAATAATG	NA	False	NA	NA	False	NA	NA	NA	87966902	87966714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_87966700_87966900
m54284U_201201_044215/89262820/ccs	chr1	-	2581	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_19	272.193826572861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215849	63182754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63214795_63214848_63215744
m54284U_201201_044215/89326030/ccs	chr9	+	3210	26	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	54.0613873295904	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	23	True	AATAAA	-24	NA	57038051	57049497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_57038174_57038442_57038543_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
m54284U_201201_044215/89392060/ccs	chr15	+	4817	20	NIC	ENSMUSG00000022463.9	novel	4040	21	NA	NA	0	0	intron_retention	FALSE	canonical	1	4	junction_19	165.260962104085	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGCTGTGTGAGTCTG	2243	False	NA	25	True	AATAAA	-21	NA	82031451	82089580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82088038_82088227
m54284U_201201_044215/89393102/ccs	chr12	+	173	1	Intergenic	novelGene_6862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAAAGAAGGAGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	104372176	104372349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_104372200_104372300
m54284U_201201_044215/89457293/ccs	chr2	+	2862	18	NIC	ENSMUSG00000027263.13	novel	2915	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_17	69.0773098816422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGGCCTTGTAGAACTA	NA	False	NA	3	True	AATAAA	-15	NA	121001689	121029251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
m54284U_201201_044215/89459193/ccs	chr5	+	1436	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	0	3666	0	0	5prime_fragment	FALSE	canonical	3	99	junction_1	13.0251418797514	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTACACTTTTCCTGATAC	NA	False	NA	28	True	ATTAAA	-36	NA	108777697	108792982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422
m54284U_201201_044215/89523205/ccs	chr12	-	2685	7	NNC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	39.8444893722248	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATAAAGGATTTGGGG	7601	False	NA	1	True	AATAAA	-21	NA	87346547	87325411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_87326977_87328088_87328180_87329073_87329158_87329419_87329561_87331799_87332161_87333668_87333912_87346347
m54284U_201201_044215/89588080/ccs	chr2	+	1273	3	Intergenic	novelGene_1276	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	9	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTATGGTGATTATTGT	NA	False	NA	NA	False	TTTAAA	-2	NA	168847925	168866329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168848074_168864580_168864668_168865291
m54284U_201201_044215/89653293/ccs	chr7	+	1657	6	NIC	ENSMUSG00000038618.13	novel	1525	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	136.336935567732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140795811	140798571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140796025_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
m54284U_201201_044215/89653449/ccs	chr11	+	1240	7	NNC	ENSMUSG00000042569.14	novel	3277	7	NA	NA	0	-294	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	85.6536955160462	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCAGAGTTCACAGTAGAA	NA	False	NA	17	True	AATAAA	-14	NA	60721504	60748955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_60721587_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
m54284U_201201_044215/89718907/ccs	chr5	-	199	1	Intergenic	novelGene_2467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAACTTCAAATCAATA	NA	False	NA	NA	False	NA	NA	NA	12387200	12387001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_12387000_12387200
m54284U_201201_044215/89719441/ccs	chr16	+	173	1	Intergenic	novelGene_8313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTTTAAAAAGGAAGCT	NA	False	NA	NA	False	NA	NA	NA	89967782	89967955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_89967800_89968000
m54284U_201201_044215/89721227/ccs	chr17	-	175	1	Intergenic	novelGene_8768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATCATTATTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	85468050	85467875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_85467900_85468000
m54284U_201201_044215/89784801/ccs	chr5	-	3201	12	NIC	ENSMUSG00000029455.15	novel	3867	13	NA	NA	0	172	intron_retention	FALSE	canonical	3	476	junction_9	96.282813447101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGGGGTCAGTTCTCTA	NA	False	NA	-26	True	AATAAA	-16	NA	121731645	121705768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_121706087_121706988_121707104_121708666_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
m54284U_201201_044215/8979867/ccs	chr9	-	6455	49	NIC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	53	junction_27	42.5310701379983	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6256	False	NA	NA	False	TTTAAA	-18	NA	21763931	21711475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
m54284U_201201_044215/89915712/ccs	chr11	+	7843	27	NIC	ENSMUSG00000037533.21	novel	8189	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_26	19.1977023403304	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGCTTCCTTCCCA	NA	False	NA	13	True	AATAAA	-14	NA	54413715	54590111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54586905
m54284U_201201_044215/89916005/ccs	chrX	-	5252	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	20	junction_1	83.6951221361661	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACTGTGTTTTGTTTTG	4277	False	NA	-2	True	AATAAA	-19	NA	92675761	92348372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_92349423_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
m54284U_201201_044215/89916018/ccs	chr1	-	1748	13	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	-17991	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	191.245533716912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTATGAGTGTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	180971769	180941537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_180941867_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
m54284U_201201_044215/89918088/ccs	chr7	-	188	1	Intergenic	novelGene_4179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATTTTTGAATGAAAAT	NA	False	NA	NA	False	NA	NA	NA	143177714	143177526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_143177500_143177700
m54284U_201201_044215/89982812/ccs	chr6	+	186	1	Intergenic	novelGene_3572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	144301074	144301260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_144301100_144301300
m54284U_201201_044215/90046537/ccs	chr5	+	2532	17	NIC	ENSMUSG00000029095.18	novel	3564	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	28.6552787458088	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGTTTTACGGTCCCTG	1557	False	NA	39	True	ATTAAA	-41	NA	35915267	36041493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_35915405_35955796_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35998624_35998746_36014471_36014525_36015169_36015309_36024048_36024111_36030513_36030569_36032176_36032258_36040649
m54284U_201201_044215/90113651/ccs	chr3	-	3182	8	NIC	ENSMUSG00000037174.19	novel	2514	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	97.7940359602146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTTTGGTCTCTG	NA	False	NA	-6	True	AATATA	-14	NA	51184935	51162650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51173233_51173467_51174173_51174288_51184625
m54284U_201201_044215/90114376/ccs	chr4	-	184	1	Intergenic	novelGene_2348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAATATTCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	146571836	146571652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146571700_146571800
m54284U_201201_044215/90179489/ccs	chr1	-	4856	18	ISM	ENSMUSG00000007097.15	ENSMUST00000085913.11	6227	23	7584	797	7584	-797	3prime_fragment	FALSE	canonical	3	101	junction_15	21.5139771096063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAGAGAAACTGCTCC	NA	False	NA	-10	True	NA	NA	NA	172118047	172100072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_172102297_172103484_172103577_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819
m54284U_201201_044215/90243386/ccs	chr11	+	140	1	Intergenic	novelGene_6499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGAGAAGGGGAGGCCT	NA	False	NA	NA	False	NA	NA	NA	119157699	119157839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_119157700_119157800
m54284U_201201_044215/90244505/ccs	chr7	-	1447	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	212	combination_of_known_junctions	FALSE	canonical	3	163	junction_7	331.9070969227	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569717	46539121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558740_46560492_46560559_46563125_46563211_46569568
m54284U_201201_044215/90245900/ccs	chr11	-	2159	19	NIC	ENSMUSG00000020792.16	novel	3449	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_13	62.4539583499737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGAGCCGGGTGAGTGT	8927	False	NA	-6	True	CATAAA	-15	NA	116197553	116179934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
m54284U_201201_044215/90309713/ccs	chr1	+	4670	30	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	574.609941628089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGGTTCATCCTGCA	NA	False	NA	22	True	AATAAA	-24	NA	185095254	185160557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
m54284U_201201_044215/90310615/ccs	chr4	-	189	1	Intergenic	novelGene_1738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTCAGCAGCTAAAGC	NA	False	NA	NA	False	NA	NA	NA	11015888	11015699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11015700_11015900
m54284U_201201_044215/90374196/ccs	chr11	+	1338	3	NIC	ENSMUSG00000035530.14	novel	1322	4	NA	NA	102	0	intron_retention	FALSE	canonical	3	11207	junction_1	780.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGATGTCCAGATTGCAC	4059	False	NA	21	True	AATAAA	-17	NA	100210812	100212922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_100210987_100211491_100211876_100212142
m54284U_201201_044215/90376711/ccs	chr9	+	3972	8	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_6	67.9891948198013	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556507_19556604_19557997
m54284U_201201_044215/90439780/ccs	chr7	+	168	1	Intergenic	novelGene_3789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTAATAAATCTTA	725	False	NA	NA	False	NA	NA	NA	34389362	34389530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_34389400_34389500
m54284U_201201_044215/90439850/ccs	chr10	+	4052	24	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_11	41.0995379862634	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGCTGTTTGTTTCACTG	NA	False	NA	20	True	TATAAA	-36	NA	127216530	127335252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
m54284U_201201_044215/90442112/ccs	chr3	+	1902	3	NIC	ENSMUSG00000028102.16	novel	1122	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	279	junction_2	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTTTTATTCAATTCA	NA	False	NA	9	True	ATTAAA	-16	NA	96542968	96552042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96543060_96543989_96544649_96550890
m54284U_201201_044215/9046497/ccs	chr7	+	1922	6	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	63.6948977548438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	594	False	NA	16	True	AATAAA	-23	NA	101872234	101887774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101872358_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
m54284U_201201_044215/90505311/ccs	chr19	+	1676	4	NIC	ENSMUSG00000071649.7	novel	1603	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	186	junction_2	17.6131264181639	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTTCATGGTTTCCTTC	4822	False	NA	19	True	AATAAA	-16	NA	8897847	8904600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8898013_8899169_8899345_8902901_8903737_8904099
m54284U_201201_044215/90507441/ccs	chr14	-	5999	25	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_24	38.9581105162969	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	NA	False	NA	-1	True	AATAAA	-24	NA	72947437	72775385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72947157
m54284U_201201_044215/90570776/ccs	chr15	-	1474	10	NIC	ENSMUSG00000060036.15	novel	1877	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	214	junction_7	9920.80080773053	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965413_79965815_79965985_79966590_79966784_79967524
m54284U_201201_044215/90572468/ccs	chr11	-	3983	10	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	486	junction_1	46.7351349576116	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100240446_100242035_100242128_100242243_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201201_044215/90573226/ccs	chr6	-	204	1	Intergenic	novelGene_3521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTAAGCGTGGATTG	NA	False	NA	NA	False	NA	NA	NA	126786104	126785900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_126785900_126786100
m54284U_201201_044215/90636526/ccs	chr5	+	9230	20	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_4	25.0437843732546	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGAAGAAATCCTT	NA	False	NA	18	True	AATAAA	-16	NA	65921321	65987451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
m54284U_201201_044215/90638032/ccs	chr11	-	189	1	Intergenic	novelGene_6105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCCTCAGTCTTTATTT	6871	False	NA	NA	False	NA	NA	NA	80074320	80074131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80074100_80074300
m54284U_201201_044215/90702070/ccs	chr12	-	3028	11	NNC	ENSMUSG00000057963.10	novel	2918	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	97.2501928018654	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTACGTGGTCACAGTC	2423	False	NA	-1	True	AATAAA	-20	NA	102671173	102534840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_102536744_102540180_102540344_102545363_102545432_102546539_102546666_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
m54284U_201201_044215/90703061/ccs	chr7	-	161	1	Intergenic	novelGene_3871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAGAAATATT	NA	False	NA	NA	False	NA	NA	NA	57898694	57898533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_57898500_57898700
m54284U_201201_044215/90704709/ccs	chr15	-	882	6	NIC	ENSMUSG00000068101.12	novel	1202	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	488.753271088798	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGTTGTAGATGCAGA	NA	False	NA	-17	True	AAAAAG	-14	NA	82128611	82118279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128505
m54284U_201201_044215/90768659/ccs	chr7	+	3265	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3333	junction_5	382.713961505667	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201201_044215/90769833/ccs	chr5	-	1221	1	FSM	ENSMUSG00000106831.2	ENSMUST00000201768.2	459	1	-35	-727	-35	727	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGGGGGTAAAAACTGAA	NA	False	NA	NA	False	AGTAAA	-45	NA	76380952	76379731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_76379700_76381000
m54284U_201201_044215/90769926/ccs	chr15	-	196	1	Intergenic	novelGene_8015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGAAATATAGTT	NA	False	NA	NA	False	NA	NA	NA	102598096	102597900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102597900_102598100
m54284U_201201_044215/90833114/ccs	chr2	-	4228	19	NIC	ENSMUSG00000041997.17	novel	4280	20	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	60.4301709045701	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTGAAAATTACACTCA	NA	False	NA	NA	False	AATAAA	-22	NA	70656128	70542750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_70544510_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
m54284U_201201_044215/90833478/ccs	chr4	-	3775	11	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	257.145950775041	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126096362
m54284U_201201_044215/90833564/ccs	chr11	+	3278	12	NIC	ENSMUSG00000038290.16	novel	5848	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	41.9042592363683	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACCTCTGCTGGTCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	74816648	75055274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74816830_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
m54284U_201201_044215/90899467/ccs	chr15	-	4544	15	NIC	ENSMUSG00000022462.8	novel	4660	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_12	84.1414018792418	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTAGGATTTTTTGT	NA	False	NA	-8	True	AATAAA	-16	NA	96597611	96585272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96596062_96596145_96596495_96596699_96597288
m54284U_201201_044215/90965555/ccs	chr5	+	1824	11	NIC	ENSMUSG00000029470.16	novel	2702	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	28.3167794778997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCTTGTCTGTGCTGCCT	NA	False	NA	15	True	ATTAAA	-20	NA	122845642	122867107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122845851_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
m54284U_201201_044215/90966261/ccs	chr12	+	2820	20	NNC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_16	169.93775950407	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9323	False	NA	24	True	ATTAAA	-41	NA	113061897	113100826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097115_113097197_113099416_113099449_113099900_113100053_113100137
m54284U_201201_044215/91029733/ccs	chr2	+	1751	12	NIC	ENSMUSG00000027523.21	novel	1716	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	251.140045221883	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGTGTTGCTCTTTGATT	NA	False	NA	15	True	AATAAA	-19	NA	174171881	174188537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174172228_174176004_174176078_174178539_174178585_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
m54284U_201201_044215/91031222/ccs	chr18	+	9640	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	0	-2619	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	21.8974884404582	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCATTCCTAAAATTTA	NA	False	NA	15	True	AATAAA	-26	NA	34353976	34452623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431778_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
m54284U_201201_044215/91031279/ccs	chr11	-	3179	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_14	370.771513611985	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
m54284U_201201_044215/91095460/ccs	chr10	+	4054	18	NNC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-14816	0	intron_retention	FALSE	canonical	3	44	junction_1	79.0900236054462	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25259740	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_25259800_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201201_044215/91095485/ccs	chr19	+	2598	10	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_2	109.160432391962	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043536	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_38043766_38045857_38045901_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/91095680/ccs	chr11	+	4591	29	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	18	junction_25	27.8112029621892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295890	87446649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87440257_87440351_87442356_87442467_87445753_87445806_87446309
m54284U_201201_044215/91096126/ccs	chr4	-	1709	12	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	305.162062349697	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2492	False	NA	-29	True	AATAAA	-14	NA	129229163	129203309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129203670_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
m54284U_201201_044215/91097746/ccs	chr16	-	229	1	Antisense	novelGene_ENSMUSG00000086944.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCCAGGTTCAGGAT	1460	False	NA	NA	False	NA	NA	NA	4547961	4547732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_4547700_4548000
m54284U_201201_044215/9110974/ccs	chr2	+	206	1	Intergenic	novelGene_961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAGGAAGTGTGAGAAGG	5105	False	NA	NA	False	NA	NA	NA	103611539	103611745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_103611500_103611700
m54284U_201201_044215/9111458/ccs	chrX	+	1193	7	NIC	ENSMUSG00000046774.18	novel	1050	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_1	98.5675177508065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100838373_100839359_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841990_100842072
m54284U_201201_044215/9111815/ccs	chr3	+	182	1	Intergenic	novelGene_1618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGAAGTAAATCTTAATTG	NA	False	NA	NA	False	NA	NA	NA	104543375	104543557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_104543400_104543600
m54284U_201201_044215/9112318/ccs	chr18	+	1743	1	Intergenic	novelGene_8888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTATAAGTCCTACGGAG	4738	False	NA	NA	False	NA	NA	NA	35499994	35501737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35500000_35501700
m54284U_201201_044215/9112327/ccs	chr5	-	3274	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	174.667302797824	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110596369	110577740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_110580012_110580270_110580449_110580766_110580968_110595745
m54284U_201201_044215/9112375/ccs	chr2	+	3519	9	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	119.982290359869	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAACTTTTTCCTTTTA	NA	False	NA	27	True	AATAAA	-24	NA	60040256	60079555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60078233
m54284U_201201_044215/9112393/ccs	chr9	+	2194	15	NIC	ENSMUSG00000045594.11	novel	2396	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_1	76.8975265651421	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGGTCCTGTCATTAA	NA	False	NA	24	True	AATAAA	-15	NA	114230175	114303445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_114230338_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
m54284U_201201_044215/91161082/ccs	chr14	+	6365	7	NIC	ENSMUSG00000047153.5	novel	4075	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_6	6.15539510420646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATGGTGGCTACTACTC	NA	False	NA	6	True	NA	NA	NA	56122430	56136232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_56122600_56123230_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
m54284U_201201_044215/91162596/ccs	chr5	+	2145	10	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	1057.95446703579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77099279_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201201_044215/91227430/ccs	chr11	+	185	1	Intergenic	novelGene_6494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTATATTATTTATTGTT	NA	False	NA	NA	False	NA	NA	NA	117875752	117875937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_117875800_117875900
m54284U_201201_044215/91227619/ccs	chr8	+	2206	13	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	80.1271125566538	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677313	122752916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122750741_122750886_122752302
m54284U_201201_044215/91359325/ccs	chr18	-	4008	8	NNC	ENSMUSG00000040446.5	novel	4299	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	90.8764579648926	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-20	NA	24663261	24618016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_24620902_24621192_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
m54284U_201201_044215/91424722/ccs	chr11	+	193	1	Intergenic	novelGene_5769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAGGACCTTGTCAGGCA	NA	False	NA	NA	False	NA	NA	NA	33455949	33456142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_33455900_33456100
m54284U_201201_044215/91425616/ccs	chr17	-	513	3	ISM	ENSMUSG00000023982.9	ENSMUST00000059348.9	873	4	4881	0	4881	0	3prime_fragment	FALSE	canonical	3	65	junction_1	4	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGAGTCTCAGCTTTTTT	6717	False	NA	0	True	NA	NA	NA	47706628	47705482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_47705746_47706032_47706127_47706472
m54284U_201201_044215/91489556/ccs	chr7	-	1570	7	NNC	ENSMUSG00000003863.19	novel	4565	30	NA	NA	-1058	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_6	15.0711276581711	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGCTTTTGTTCTTAA	5928	False	NA	-2	True	NA	NA	NA	44991642	44988549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_44989442_44989612_44989685_44989998_44990171_44990341_44990411_44990492_44990669_44991110_44991209_44991551
m54284U_201201_044215/91555942/ccs	chr5	-	1354	4	NIC	ENSMUSG00000044681.20	novel	1984	3	NA	NA	70	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	81.5693297481079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAAACTTGCATGAAT	NA	False	NA	-6	True	ATTAAA	-17	NA	28414950	28407446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_28408435_28412284_28412382_28414121_28414326_28414885
m54284U_201201_044215/91621394/ccs	chr11	+	2507	4	NNC	ENSMUSG00000020272.9	novel	5026	19	NA	NA	26187	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	27.0102861065105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGCAAGCACTGTTGTTC	1712	False	NA	1	True	AATAAA	-12	NA	32564781	32574587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_32564885_32565780_32565907_32567848_32567963_32572423
m54284U_201201_044215/91685572/ccs	chr18	-	2952	9	NIC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_5	68.2567533288831	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70601124_70601589_70602519_70602849_70604743_70605051_70605361
m54284U_201201_044215/91685671/ccs	chr7	+	3003	16	NNC	ENSMUSG00000061079.15	novel	2631	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	71.2814141273867	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	19	True	AATACA	-17	NA	109660916	109694601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109660983_109668694_109668810_109669684_109669778_109670578_109670663_109671328_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
m54284U_201201_044215/91685941/ccs	chr12	+	874	4	NNC	ENSMUSG00000055884.9	novel	1682	7	NA	NA	0	-6654	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_3	59.9462722406953	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGATTAAAAAGCAAAAGGA	9280	False	NA	NA	False	NA	NA	NA	65122376	65134204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_65122952_65123815_65123989_65129805_65129884_65134156
m54284U_201201_044215/91687749/ccs	chr12	-	178	1	Intergenic	novelGene_6586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	21419635	21419457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_21419500_21419600
m54284U_201201_044215/9175852/ccs	chr1	-	200	1	Intergenic	novelGene_143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAACCTGAGTCCTTTGTT	NA	False	NA	NA	False	NA	NA	NA	59780108	59779908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59779900_59780100
m54284U_201201_044215/91816175/ccs	chr5	-	4690	20	NIC	ENSMUSG00000029090.13	novel	4480	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_18	145.136195469831	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGTGCTGGTGGCTT	NA	False	NA	-10	True	AATAAA	-14	NA	50216348	50117297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215475_50215686_50215893
m54284U_201201_044215/91817456/ccs	chr1	+	3883	5	NNC	ENSMUSG00000036206.13	novel	4995	6	NA	NA	63088	-1275	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.2566132938026	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATGTTCTTTAAAG	NA	False	NA	22	True	AGTAAA	-16	NA	89061262	89081515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_89061688_89065280_89065526_89071271_89073629_89079921_89080111_89080848
m54284U_201201_044215/918698/ccs	chr15	+	2354	18	NNC	ENSMUSG00000022390.12	novel	5740	23	NA	NA	0	2184	at_least_one_novel_splicesite	TRUE	canonical	3	50	junction_17	51.2595674249711	119	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATAGGGCATGATGGCA	1948	False	NA	NA	False	NA	NA	NA	81629257	81670841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81670820
m54284U_201201_044215/91948980/ccs	chr4	+	525	2	Antisense	novelGene_ENSMUSG00000028399.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAATGTTTAGCATTTC	NA	False	NA	NA	False	AATAAA	-16	NA	77229108	77232614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_+_77229411_77232391
m54284U_201201_044215/92078674/ccs	chr5	+	2119	10	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	1045.0028294604	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77099253_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201201_044215/92078746/ccs	chr1	+	1793	13	NIC	ENSMUSG00000033021.17	novel	1692	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_1	58.385869199852	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGACTCCTACTTGCGC	NA	False	NA	18	True	AATAAA	-22	NA	75412625	75419823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
m54284U_201201_044215/92079431/ccs	chr14	-	3378	10	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	24.9131825880731	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032450	33958989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_34030996_34031052_34032123
m54284U_201201_044215/92080682/ccs	chr5	+	177	1	Intergenic	novelGene_2740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATTCCAGAAGATT	NA	False	NA	NA	False	NA	NA	NA	108189698	108189875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108189700_108189900
m54284U_201201_044215/92080868/ccs	chr7	+	1403	12	NNC	ENSMUSG00000023072.15	novel	2610	19	NA	NA	0	959	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_11	38.1133585396715	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTCATCCCACGTTTT	NA	False	NA	NA	False	NA	NA	NA	35096479	35121618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35121492
m54284U_201201_044215/92209250/ccs	chr15	-	220	1	Intergenic	novelGene_7730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGTCTGGTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	58637506	58637286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_58637300_58637500
m54284U_201201_044215/92209699/ccs	chr6	+	2287	12	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	218	junction_2	102.024061333144	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	13	True	NA	NA	False	NA	NA	NA	30048027	30140903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
m54284U_201201_044215/92211243/ccs	chr12	+	1161	1	Intergenic	novelGene_6772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	81810744	81811905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_81810700_81811900
m54284U_201201_044215/92211740/ccs	chr6	-	1614	12	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2846.0788655782	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446874	51438100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
m54284U_201201_044215/92275024/ccs	chr13	+	1226	10	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	0	-840	intron_retention	FALSE	canonical	1	7	junction_8	195.187089737001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083662	107095428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107093601_107093709_107095162
m54284U_201201_044215/92275408/ccs	chr1	-	6477	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_39	236.698919191074	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
m54284U_201201_044215/92275755/ccs	chr5	-	1075	8	NNC	ENSMUSG00000025747.13	novel	3163	7	NA	NA	0	66	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	816.008178230326	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGCTTTCAGTGATGCT	NA	False	NA	-23	True	ATTAAA	-17	NA	30278615	30265995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276224_30276308_30276631_30276706_30278358
m54284U_201201_044215/92277103/ccs	chr7	-	3015	13	NIC	ENSMUSG00000002602.17	novel	4265	20	NA	NA	-268	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	2.09496751499609	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATGTCTAAAGATCTTA	3249	False	NA	NA	False	ATTAAA	-12	NA	25474371	25457054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473939
m54284U_201201_044215/9240634/ccs	chr12	-	2244	7	NNC	ENSMUSG00000020652.18	novel	2037	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	27.9026084005699	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCTGCAGATTCTTTGT	NA	False	NA	-9	True	AATAAA	-19	NA	4283965	4263481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281445_4281683_4283530_4283658_4283781
m54284U_201201_044215/92407672/ccs	chr1	+	3185	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	0	-237	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_7	1026.15450163437	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTGGACTTGT	NA	False	NA	15	True	AATAAA	-18	NA	87141700	87167973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
m54284U_201201_044215/9241388/ccs	chr3	+	5884	1	ISM	ENSMUSG00000038495.15	ENSMUST00000090785.9	8101	13	50724	0	4542	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATTTCATTTCCTGT	NA	False	NA	12	True	AATAAA	-22	NA	96062562	96068446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_96062600_96068400
m54284U_201201_044215/9241678/ccs	chr7	+	1786	7	NIC	ENSMUSG00000037706.18	novel	1533	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	5787	junction_4	294.940672000319	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGACCTCTTCCTGT	NA	False	NA	42	True	AATAAA	-30	NA	142606530	142621671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620500_142620883_142620971_142621048
m54284U_201201_044215/9241765/ccs	chr2	+	3185	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	64	junction_2	181.868635606264	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	634	False	NA	36	True	AATAAA	-37	NA	31462803	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_31462966_31473166_31473273_31482477_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
m54284U_201201_044215/9242168/ccs	chr10	+	2932	8	NIC	ENSMUSG00000019864.15	novel	2981	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	54.2183792920927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTTTTTGGTCACTG	NA	False	NA	8	True	NA	NA	NA	43777802	43823858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43804318_43804456_43808358_43808543_43811994_43812088_43822416
m54284U_201201_044215/92471562/ccs	chr7	-	1560	13	NIC	ENSMUSG00000041560.13	novel	1455	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	550.108846552712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679726	15671762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679442
m54284U_201201_044215/92471887/ccs	chr5	+	3387	19	NNC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	49.9421888008748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTCTTAAGCCTTATA	NA	False	NA	17	True	AATAAA	-27	NA	76677174	76718141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685738_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
m54284U_201201_044215/92472069/ccs	chr11	+	3008	3	NIC	ENSMUSG00000020519.6	novel	1151	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	563	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCGGTCAGGAGGATTA	NA	False	NA	24	True	AATAAA	-24	NA	57692462	57701043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_57693116_57696869_57698949_57700767
m54284U_201201_044215/92472811/ccs	chr9	+	176	1	Intergenic	novelGene_4857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	64034774	64034950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64034800_64035000
m54284U_201201_044215/92473643/ccs	chr11	-	170	1	Intergenic	novelGene_6057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAGTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77932522	77932352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_77932400_77932500
m54284U_201201_044215/92537042/ccs	chr8	-	174	1	Intergenic	novelGene_4491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTTTGCT	NA	False	NA	NA	False	NA	NA	NA	111657228	111657054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_111657100_111657200
m54284U_201201_044215/92537259/ccs	chr2	-	1921	5	NIC	ENSMUSG00000033256.15	novel	1539	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	75	junction_4	29.1493996507647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCGAGCATCCACTCGC	NA	False	NA	-10	True	TATAAA	-39	NA	122199618	122179372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_122180021_122184245_122184679_122187563_122187771_122189928_122190071_122199127
m54284U_201201_044215/92537776/ccs	chr8	+	2071	16	NIC	ENSMUSG00000041438.9	novel	2232	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	322.528317447562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAGACATTTTAAATTA	NA	False	NA	12	True	AATAAA	-17	NA	107620282	107649720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_107620345_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
m54284U_201201_044215/92669511/ccs	chr7	-	3882	23	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	251.251232470971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	9414	False	NA	-7	True	NA	NA	NA	126102609	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201201_044215/92670594/ccs	chr7	-	1931	11	NIC	ENSMUSG00000002068.17	novel	2000	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	124	junction_8	222.463053112197	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTCTTAACTCTGT	NA	False	NA	-12	True	AATAAA	-19	NA	37806959	37797408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37806020_37806109_37806211_37806255_37806746
m54284U_201201_044215/92670758/ccs	chr3	-	3155	31	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	16.640279110907	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843416	102725814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
m54284U_201201_044215/92734122/ccs	chr5	-	180	1	Intergenic	novelGene_3093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTTTAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	150094062	150093882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_150093900_150094100
m54284U_201201_044215/92735685/ccs	chr10	-	1271	5	NIC	ENSMUSG00000035278.10	novel	1260	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	953	junction_4	141.850934082226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTCGGAATGAGTGGA	NA	False	NA	-3	True	AATAAA	-17	NA	80634394	80631932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80632357_80632424_80632657_80633606_80633674_80633743_80633812_80633914
m54284U_201201_044215/92736061/ccs	chr1	+	5475	1	NIC	ENSMUSG00000026096.15	novel	1868	8	NA	NA	0	470	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAAAAACATAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	53352812	53358287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_53352800_53358300
m54284U_201201_044215/92864650/ccs	chr7	+	1915	8	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	212.306863011144	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_138448245_138448340_138448434_138470138_138470237_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
m54284U_201201_044215/92865400/ccs	chr17	-	1815	4	NIC	ENSMUSG00000024459.19	novel	2459	4	NA	NA	0	278	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	95.5033449094265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTAAGTGAGACTGGAAA	NA	False	NA	-5	True	TTTAAA	-4	NA	37299937	37294674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_37295995_37298307_37298416_37298546_37298823_37299826
m54284U_201201_044215/92866921/ccs	chr5	+	3327	11	NIC	ENSMUSG00000041264.17	novel	3827	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	144.908384850567	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGTTTCATTTTGTG	NA	False	NA	16	True	ATTAAA	-16	NA	149121476	149152244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
m54284U_201201_044215/92931251/ccs	chr9	-	3807	21	NNC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_19	89.637310869972	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7559	False	NA	NA	False	AATAAA	-18	NA	107749974	107650761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730740_107737547_107737659_107749847
m54284U_201201_044215/92996359/ccs	chr4	-	5014	22	NIC	ENSMUSG00000029016.14	novel	3306	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_11	25.583795892027	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTGTCTCCACGGTGCT	7422	False	NA	-1	True	AATAAA	-22	NA	148123270	148088715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
m54284U_201201_044215/92996917/ccs	chr1	-	5758	25	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	0	-1853	intron_retention	FALSE	canonical	2	43	junction_21	312.714923314972	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066553	55026184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055650_55055937_55056043_55058392_55058560_55066497
m54284U_201201_044215/93061599/ccs	chr11	-	1854	9	NIC	ENSMUSG00000025138.15	novel	1727	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	54	junction_8	11.7260393995586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCCCGATGACTGT	NA	False	NA	-1	True	ATTAAA	-15	NA	120515825	120509197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120509876_120510988_120511096_120511249_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
m54284U_201201_044215/93061938/ccs	chr6	-	1652	8	NIC	ENSMUSG00000030298.11	novel	1353	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	942	junction_7	83.0657472568985	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCATCCCACACAGTGAG	5	True	NA	-10	True	AATAAA	-23	NA	113717688	113705022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_113705425_113706556_113706704_113707295_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
m54284U_201201_044215/9307203/ccs	chr16	-	1954	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	966.910543949129	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1021	False	NA	-3	True	ATTAAA	-25	NA	11021128	11010833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_11011602_11012323_11012576_11014137_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
m54284U_201201_044215/9308830/ccs	chr19	+	1938	8	NIC	ENSMUSG00000024726.11	novel	4518	8	NA	NA	-164	566	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	433.244145714536	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTCGAATTAGAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	18648528	18682152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_18648800_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
m54284U_201201_044215/93194026/ccs	chr11	-	2758	18	NIC	ENSMUSG00000020400.18	novel	2834	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_17	40.9030417393305	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGACTGGCTAATT	3582	False	NA	-5	True	CATAAA	-18	NA	54846948	54801612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54802324_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54828772_54828892_54830423_54830562_54831536_54831709_54846846
m54284U_201201_044215/93194134/ccs	chr19	-	1790	1	Intergenic	novelGene_9336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAGAAAAAAAAAAAA	5526	False	NA	NA	False	NA	NA	NA	53385079	53383289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_53383300_53385100
m54284U_201201_044215/93194960/ccs	chr2	-	175	1	Intergenic	novelGene_1320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATACCATGATC	1011	False	NA	NA	False	NA	NA	NA	180588360	180588185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_180588200_180588400
m54284U_201201_044215/93260419/ccs	chr12	-	2087	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	109.640954432588	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490609	87474846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87488412_87488551_87490411
m54284U_201201_044215/93325393/ccs	chr5	-	194	1	FSM	ENSMUSG00000025537.13	ENSMUST00000200832.2	2119	1	645	1280	645	-1280	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTTTAAAAAAGAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	129900173	129899979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_129900000_129900200
m54284U_201201_044215/93326033/ccs	chr13	+	1428	2	Intergenic	novelGene_7058	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	82	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCATGCTTGCTTTCCCTG	NA	False	NA	8	True	AATAAA	-15	NA	49121618	49123379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_49122081_49122413
m54284U_201201_044215/93389190/ccs	chr4	-	222	1	Intergenic	novelGene_2069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGTTGTTGGTG	NA	False	NA	NA	False	NA	NA	NA	120289287	120289065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_120289100_120289300
m54284U_201201_044215/93391589/ccs	chr4	+	5171	23	NIC	ENSMUSG00000028423.16	novel	4594	24	NA	NA	66	0	intron_retention	FALSE	canonical	3	177	junction_16	191.817557086445	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTGTTTATTGAG	-20	True	NA	34	True	ATTAAA	-19	NA	40970971	41025993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
m54284U_201201_044215/93391619/ccs	chr14	-	192	1	Intergenic	novelGene_7558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAATGACAAAGAGAGCT	7592	False	NA	NA	False	NA	NA	NA	79634553	79634361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_79634400_79634600
m54284U_201201_044215/93455204/ccs	chr9	+	2549	5	NIC	ENSMUSG00000109032.2	novel	505	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	17.0953209972788	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75375897	75393963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_75375966_75386953_75387087_75388729_75388947_75390380_75390480_75391931
m54284U_201201_044215/93520106/ccs	chr8	-	999	4	NIC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	68.8250600354906	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTGCAAGCTATTTTC	7520	False	NA	-9	True	AATAAA	-22	NA	84738800	84736850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84737122_84737339_84737402_84737769_84738378_84738742
m54284U_201201_044215/93522649/ccs	chr10	+	1965	13	NIC	ENSMUSG00000025410.11	novel	1784	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	604	junction_8	37.2904329404861	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCAGAGTTTCAAAATA	9216	False	NA	16	True	AATAAA	-18	NA	127102255	127117819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127114092_127114185_127114278_127117269
m54284U_201201_044215/93585509/ccs	chr1	-	1498	12	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	59.5276170368229	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAAGCAGGTGATC	4340	False	NA	NA	False	NA	NA	NA	59158965	59140069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
m54284U_201201_044215/93587291/ccs	chr3	-	4165	25	NIC	ENSMUSG00000027699.20	novel	4086	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_24	156.17538218298	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTTTTATGTGTCCTG	1838	False	NA	NA	False	AATAAA	-16	NA	27207999	27151374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207771
m54284U_201201_044215/93653041/ccs	chr10	+	1017	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	460	junction_4	2987.93005272881	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662519	80665118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664726
m54284U_201201_044215/93716722/ccs	chr4	-	3789	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_5	409.745886322273	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201201_044215/93716981/ccs	chr12	-	10812	30	NIC	ENSMUSG00000021182.17	novel	7542	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_5	24.7293554827487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCCCTGGTTTTCTTCA	NA	False	NA	-3	True	AATAAA	-17	NA	100995315	100877781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100888450_100891910_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
m54284U_201201_044215/9371886/ccs	chr1	+	556	4	NNC	ENSMUSG00000005681.13	novel	518	4	NA	NA	-3187	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_1	24.4176620957499	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGCCTCTTGTGTCTT	NA	False	NA	11	True	AATAAA	-17	NA	171049435	171053942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_171049548_171052855_171052936_171053234_171053368_171053711
m54284U_201201_044215/9372457/ccs	chr7	-	1419	10	NIC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	212	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	371.218746865903	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569717	46539121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558712_46560492_46560559_46563125_46563211_46569568
m54284U_201201_044215/9372707/ccs	chr8	+	2041	14	NNC	ENSMUSG00000004567.17	novel	2065	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	90.7944554259492	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCGGTGGTCTAATTTG	NA	False	NA	9	True	AATAAA	-10	NA	3550503	3565229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560453_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
m54284U_201201_044215/9373227/ccs	chr5	+	2108	14	NIC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	554	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	269.32883928135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTGTGGTAAGCTTT	NA	False	NA	22	True	GATAAA	-11	NA	31652096	31668757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31652695_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
m54284U_201201_044215/9373254/ccs	chr4	-	1251	10	NNC	ENSMUSG00000028651.13	novel	1188	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_9	402.767647382182	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTGCCTCCTGCAAGTTG	NA	False	NA	-14	True	AATAAA	-25	NA	123033744	123020907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030593_123030692_123031318_123031363_123032658_123032758_123033702
m54284U_201201_044215/9373295/ccs	chr8	+	3832	25	NNC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_8	83.8768939180114	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9251	False	NA	NA	False	AATAAA	-23	NA	70243899	70260399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250491_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
m54284U_201201_044215/93782762/ccs	chr17	-	212	1	Intergenic	novelGene_8355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGTTTGGCCTGTTTTGC	NA	False	NA	NA	False	AAAACA	-17	NA	6895892	6895680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_6895700_6895900
m54284U_201201_044215/93783359/ccs	chr4	-	184	1	Intergenic	novelGene_2187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTGAAGACTGGTAATGA	NA	False	NA	NA	False	NA	NA	NA	131996945	131996761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_131996800_131996900
m54284U_201201_044215/93783877/ccs	chr10	+	1662	1	NIC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80128300_80129900
m54284U_201201_044215/93847901/ccs	chr3	-	2317	4	ISM	ENSMUSG00000027860.16	ENSMUST00000161021.2	818	5	990	-1463	0	0	3prime_fragment	FALSE	canonical	3	141	junction_3	77.2801541291309	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102073256	102064032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_-_102065814_102070614_102070850_102072670_102072804_102073088
m54284U_201201_044215/93848163/ccs	chr2	+	2287	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1876	junction_7	253.395508939321	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120816
m54284U_201201_044215/93849556/ccs	chr5	+	2215	14	NNC	ENSMUSG00000029447.14	novel	2588	14	NA	NA	58	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	1204.1141309015	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTTGAAATGACTGAAA	NA	False	NA	38	True	AATAAA	-30	NA	129864119	129875212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_129864325_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
m54284U_201201_044215/93913253/ccs	chr5	-	3165	18	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	504.425707233134	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115397552_115397606_115398177_115398375_115410315
m54284U_201201_044215/93914946/ccs	chr14	+	2364	9	NIC	ENSMUSG00000036291.7	novel	2544	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_8	38.1042976578758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGATTTCTTATGCT	NA	False	NA	NA	False	AATAAA	-9	NA	49303987	49328255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701_49323817_49327656
m54284U_201201_044215/94045406/ccs	chr9	+	1118	8	NNC	ENSMUSG00000093803.6	novel	385	3	NA	NA	-1001	1098	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	58.6118327539372	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGTGCACAGTCAGGC	NA	False	NA	21	True	AATAAA	-22	NA	124199415	124202494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_124199575_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
m54284U_201201_044215/94046697/ccs	chr6	-	179	1	Intergenic	novelGene_3590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGCATAGTGAGAAGC	5388	False	NA	NA	False	NA	NA	NA	148895781	148895602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148895600_148895800
m54284U_201201_044215/94110109/ccs	chr8	+	3898	25	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	223	junction_12	42.3897262186121	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9251	False	NA	NA	False	AATAAA	-23	NA	70243899	70260399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
m54284U_201201_044215/94112445/ccs	chr13	+	4377	12	NIC	ENSMUSG00000025873.17	novel	4322	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	187.610022816365	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACCAGCTGTGGGTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	54769616	54811876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_54769717_54777202_54777278_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
m54284U_201201_044215/94176222/ccs	chr11	-	3537	10	NIC	ENSMUSG00000017677.12	novel	2476	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	151.935983920454	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACATTGCCGATATTTC	975	False	NA	-24	True	ATTAAA	-12	NA	79145497	79130213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79133324_79134402_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
m54284U_201201_044215/94178008/ccs	chr3	-	2769	14	NIC	ENSMUSG00000055436.19	novel	3106	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_10	233.411691548387	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157742276	157716555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157729759_157729869_157732361_157732496_157737088_157737286_157742152
m54284U_201201_044215/94241491/ccs	chr4	+	4614	18	NIC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	163.478197651144	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/94241505/ccs	chr11	+	2669	1	NIC	ENSMUSG00000078695.9	novel	546	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACTGTTTCTGTGGTCAC	2452	False	NA	-1	True	AATAAA	-21	NA	97576778	97579447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97576800_97579400
m54284U_201201_044215/94307595/ccs	chr7	-	1522	8	NIC	ENSMUSG00000030695.17	novel	1511	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	19253	junction_4	590.139658323799	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTGTTCATGTCTTGT	NA	False	NA	-3	True	AATAAA	-18	NA	126398342	126394405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396949_126398216
m54284U_201201_044215/94374089/ccs	chr9	+	1751	6	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	35.9243649909083	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGCTGCTGTCGTTC	NA	False	NA	14	True	AATACA	-18	NA	108661020	108683531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108661070_108673262_108673596_108675469_108675693_108676440_108676617_108681740_108681917_108682737
m54284U_201201_044215/94374532/ccs	chr9	+	1641	9	NIC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-147	intron_retention	FALSE	canonical	3	16882	junction_3	1404.88054986002	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084760_64085002_64085087_64085178_64085300_64085504
m54284U_201201_044215/94374597/ccs	chr12	-	1587	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_5	321.637477086652	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637782_111637858_111638014_111638199_111638408_111638663
m54284U_201201_044215/94374609/ccs	chr4	+	2458	10	NNC	ENSMUSG00000028347.15	novel	2461	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_7	136.341075574784	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTGCTTTGTGTGCTCA	12	True	NA	NA	False	AATATA	-15	NA	48585173	48663131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617231_48617332_48636839_48636989_48638979_48639046_48650300_48650419_48658773_48658933_48662000
m54284U_201201_044215/9439481/ccs	chr4	+	5242	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	139.363681881846	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201201_044215/94438647/ccs	chr15	-	3278	16	NNC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_15	29.783664426438	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449889	100400676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449388_100449790
m54284U_201201_044215/94439958/ccs	chr2	+	2537	17	ISM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	10418	-2	10349	0	3prime_fragment	FALSE	canonical	3	17	junction_1	5.90517516674992	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCCCAGGTGTCTCACT	5209	False	NA	NA	False	AATAAA	-17	NA	35156809	35197904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
m54284U_201201_044215/94503517/ccs	chrX	-	1971	12	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	148	junction_10	377.275903601087	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100129011	100122815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127782_100127881_100128877
m54284U_201201_044215/94503928/ccs	chr19	-	169	1	Intergenic	novelGene_9351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	57566520	57566351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_57566400_57566500
m54284U_201201_044215/94505061/ccs	chr7	-	3133	6	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	94.5101052798059	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995909	125982025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125984312_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
m54284U_201201_044215/94505113/ccs	chr9	-	3293	12	ISM	ENSMUSG00000043987.19	ENSMUST00000213154.2	6105	32	47406	-1312	-3790	0	3prime_fragment	FALSE	canonical	3	64	junction_3	8.12505562600157	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCCTGTGAGTGTGCT	NA	False	NA	37	True	ATTAAA	-25	NA	45687619	45678243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162
m54284U_201201_044215/94568917/ccs	chr1	-	1897	6	ISM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	5	0	0	0	intron_retention	FALSE	canonical	3	103	junction_4	16.4608626748418	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTGGACATGTCTTT	884	False	NA	-10	True	AATATA	-8	NA	171173208	171169811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481
m54284U_201201_044215/94569406/ccs	chr1	+	1663	1	Intergenic	novelGene_217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAGAGGATGGTGTAGA	NA	False	NA	NA	False	NA	NA	NA	84762040	84763703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_84762000_84763700
m54284U_201201_044215/94571225/ccs	chr9	-	182	1	Intergenic	novelGene_5031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATCATTATATG	NA	False	NA	NA	False	NA	NA	NA	99454571	99454389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_99454400_99454600
m54284U_201201_044215/94766007/ccs	chr17	-	3439	15	NNC	ENSMUSG00000024006.18	novel	3351	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	272.095243303832	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226969	29189853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29219797_29219886_29226684
m54284U_201201_044215/94830738/ccs	chr5	+	102	1	Intergenic	novelGene_2465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1064	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAACAAACAGTCATATA	NA	False	NA	NA	False	NA	NA	NA	12205070	12205172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_12205100_12205200
m54284U_201201_044215/94831018/ccs	chr15	-	1724	4	NIC	ENSMUSG00000116295.2	novel	510	4	NA	NA	0	941	combination_of_known_junctions	FALSE	canonical	3	708	junction_3	16.5797734872612	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCACTGTTGCTTGCTTGCT	NA	False	NA	-5	True	NA	NA	NA	97065125	97057872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_97059277_97059835_97059964_97064383_97064508_97065057
m54284U_201201_044215/94832194/ccs	chrX	-	679	3	ISM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	15543	-3	-6612	0	3prime_fragment	FALSE	canonical	3	36	junction_1	10.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTGTGGCTTATTAT	NA	False	NA	-28	True	NA	NA	NA	7295839	7278341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_-_7278772_7290368_7290524_7295745
m54284U_201201_044215/94833400/ccs	chr6	+	1811	11	ISM	ENSMUSG00000068323.13	ENSMUST00000113899.8	5039	24	40018	1193	0	276	3prime_fragment	FALSE	canonical	3	17	junction_9	149.627704653918	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5726	False	NA	7	True	AATAAA	-17	NA	83254374	83280734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83277452_83277521_83280307
m54284U_201201_044215/94897084/ccs	chr5	+	4233	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	643.731503725652	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213582	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/94897326/ccs	chr17	-	2206	8	NNC	ENSMUSG00000024097.12	novel	2288	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	750.743006110939	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514733	80507508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511631_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
m54284U_201201_044215/94963127/ccs	chrX	-	2607	12	NIC	ENSMUSG00000025151.17	novel	2821	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_11	424.670839962022	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGCTTCTCATCTT	NA	False	NA	-2	True	AATAAA	-21	NA	93585609	93579079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93585497
m54284U_201201_044215/95027442/ccs	chr14	-	2339	8	NIC	ENSMUSG00000022199.13	novel	2348	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_4	3.06394436993246	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATAGCCTGGACTTCCC	NA	False	NA	-15	True	AATAAA	-23	NA	55150560	55144201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150188_55150323
m54284U_201201_044215/95027856/ccs	chr7	+	3157	23	NNC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_5	100.677539412467	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTTCTAGTTTCTGG	990	False	NA	26	True	AATAAA	-14	NA	97130219	97190602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145023_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
m54284U_201201_044215/95029444/ccs	chr12	-	3222	14	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	50.8484230844725	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATCAAAGGTGCATC	NA	False	NA	-16	True	AATAAA	-14	NA	75643019	75499272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_75500588_75506476_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
m54284U_201201_044215/9504585/ccs	chr7	-	3871	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_21	1322.60809819307	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110681933	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681629
m54284U_201201_044215/95092787/ccs	chr19	+	4873	8	NIC	ENSMUSG00000024989.16	novel	2442	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	204	junction_1	56.8951775152323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043458	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38043530_38045857_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201201_044215/95093117/ccs	chr13	+	2657	18	NIC	ENSMUSG00000017756.10	novel	3242	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_17	177.258495972587	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAATGGTATGCTCATGT	NA	False	NA	NA	False	AAAAAG	-16	NA	73911825	73950715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73950359
m54284U_201201_044215/95093487/ccs	chr13	+	3329	10	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	133.828340389314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATAATTTTGACGTGTA	6219	False	NA	NA	False	AATAAA	-29	NA	75855642	75920483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_75855917_75873071_75873120_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
m54284U_201201_044215/95160827/ccs	chr3	-	2222	6	NIC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	259	-5432	intron_retention	FALSE	canonical	3	21	junction_5	41.5855744219074	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACAGACTGATGGAGTGT	NA	False	NA	-29	True	AATAAA	-18	NA	32419350	32394376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419314
m54284U_201201_044215/95290053/ccs	chr19	-	2532	18	NNC	ENSMUSG00000041360.9	novel	3471	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_17	358.726852935909	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACCTTTGGTTTAA	NA	False	NA	-17	True	TATAAA	-10	NA	27407225	27367460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27406767
m54284U_201201_044215/95290226/ccs	chr5	+	4215	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_5	729.324192210673	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108221172_108221321_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201201_044215/95356078/ccs	chr15	+	1977	4	NIC	ENSMUSG00000000346.10	novel	542	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	516	junction_1	340.746565972751	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCAGCATTCTTTACTTAG	NA	False	NA	18	True	AATAAA	-25	NA	100513985	100518642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_100514204_100514793_100514913_100515805_100516052_100517248
m54284U_201201_044215/95357186/ccs	chr2	-	2005	11	NIC	ENSMUSG00000026988.16	novel	2072	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	14.3488675511345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATGCCTAAGTGTGTT	NA	False	NA	0	True	AATAAA	-20	NA	59712935	59682707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_59683306_59688953_59689095_59691904_59692085_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712821
m54284U_201201_044215/95423069/ccs	chr7	-	1407	12	NIC	ENSMUSG00000040331.17	novel	1435	11	NA	NA	87	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	558.407875456553	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTGATCGTTTTTATTG	NA	False	NA	-7	True	ATTAAA	-22	NA	130149024	130134255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130145095_130145155_130147624_130147703_130148721
m54284U_201201_044215/95423228/ccs	chr17	+	2412	16	NIC	ENSMUSG00000002833.12	novel	3354	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	249.767002535474	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTATTGGCTTAGGTGC	NA	False	NA	NA	False	TATAAA	-25	NA	56388423	56407607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56388717_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
m54284U_201201_044215/95488711/ccs	chr4	+	3502	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	323.532283622444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	118	False	NA	8	True	AATAAA	-20	NA	137321065	137383642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321194_137321614_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201201_044215/95552645/ccs	chr4	-	4533	22	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7359	-765	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	7.87947763499926	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCAGGAGTGGATGAATG	NA	False	NA	NA	False	TTTAAA	-18	NA	63328950	63286126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63290033_63290130_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
m54284U_201201_044215/95552969/ccs	chr1	-	2590	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	239.419114661662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215992	63182754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586_63215684_63215923
m54284U_201201_044215/95617430/ccs	chr19	+	1204	1	Intergenic	novelGene_9249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACATTTACAAGACTGGA	NA	False	NA	NA	False	NA	NA	NA	40257494	40258698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_40257500_40258700
m54284U_201201_044215/95617886/ccs	chr7	+	948	6	NNC	ENSMUSG00000030649.19	novel	2797	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	208.612559545201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTATTCCCTGTTTGTT	8272	False	NA	25	True	AATAAA	-25	NA	101546069	101548751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_101546254_101546939_101547025_101547148_101547279_101547760_101547821_101548106_101548245_101548400
m54284U_201201_044215/95617996/ccs	chr8	+	1507	13	NIC	ENSMUSG00000031629.15	novel	2931	13	NA	NA	0	261	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	79.2867510299728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGAATGATCCTGGTTA	NA	False	NA	11	True	AATAAA	-27	NA	47005103	47031674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014859_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
m54284U_201201_044215/95618723/ccs	chr15	+	5444	23	NIC	ENSMUSG00000037119.5	novel	5560	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_11	77.6010671307728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTGGAGAGTGTCTAA	NA	False	NA	16	True	AATAAA	-16	NA	58287316	58329589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
m54284U_201201_044215/95619046/ccs	chr19	+	1379	3	NIC	ENSMUSG00000071653.10	novel	793	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	3190	junction_2	127.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGAAGTGCAGCAGGG	NA	False	NA	32	True	AATAAA	-21	NA	8866262	8868110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8866329_8866487_8867465_8867774
m54284U_201201_044215/95619390/ccs	chr6	-	188	1	Intergenic	novelGene_3202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATCACTAAAGTAGAAT	NA	False	NA	NA	False	NA	NA	NA	38356211	38356023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38356000_38356200
m54284U_201201_044215/95619780/ccs	chr11	+	3105	17	NNC	ENSMUSG00000034121.13	novel	2499	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_5	38.3030677622563	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	6456	False	NA	18	True	TATAAA	-20	NA	87744040	87754629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747485_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752945_87753393_87753477_87753566_87753665_87753762
m54284U_201201_044215/95682615/ccs	chr9	-	179	1	Intergenic	novelGene_4893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	65961210	65961031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65961000_65961200
m54284U_201201_044215/9568762/ccs	chr17	+	1044	7	NNC	ENSMUSG00000002767.14	novel	1031	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	404.152920728446	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	False	NA	28	True	AATAAA	-17	NA	46957168	46961058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959933_46960035_46960809
m54284U_201201_044215/9570119/ccs	chrX	-	4865	16	NIC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	140.096062281089	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800253	149766136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797147_149800196
m54284U_201201_044215/9570522/ccs	chr11	+	3875	38	NIC	ENSMUSG00000039230.15	novel	3906	39	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_20	78.8302537837747	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCCTCTGCCTATCT	NA	False	NA	32	True	ATTAAA	-14	NA	121342774	121507989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
m54284U_201201_044215/95748441/ccs	chr13	+	1080	6	NNC	ENSMUSG00000021420.14	novel	726	5	NA	NA	-11812	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	93.2660710011953	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACATAGCATTTGTCTTT	NA	False	NA	9	True	AATAAA	-20	NA	36404292	36721567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_36404475_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
m54284U_201201_044215/95879524/ccs	chr11	-	2551	10	NIC	ENSMUSG00000025130.12	novel	2861	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1798	junction_6	86.1162005664439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCATTGTCACTGCTGCT	3779	False	NA	-11	True	AATAAA	-14	NA	120463667	120451130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120452087_120452986_120453074_120453189_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
m54284U_201201_044215/95882021/ccs	chr11	-	175	1	Intergenic	novelGene_6522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGAGAGAGATAAAG	NA	False	NA	NA	False	NA	NA	NA	120942452	120942277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_120942300_120942500
m54284U_201201_044215/95945315/ccs	chr9	+	1133	7	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_2	991.22511177947	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_64188930_64195389_64195526_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
m54284U_201201_044215/96011365/ccs	chr15	-	584	3	ISM	ENSMUSG00000022304.14	ENSMUST00000110306.9	2110	10	64219	0	0	0	3prime_fragment	FALSE	canonical	1	4	junction_2	106	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTGTCTGAGTTCCAT	NA	False	NA	NA	False	AATAAA	-22	NA	39656647	39646092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_39646506_39647964_39648111_39656622
m54284U_201201_044215/96012752/ccs	chr18	+	3488	10	NIC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1085	junction_1	121.692792730174	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	20	True	AATAAA	-19	NA	56840884	56886496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
m54284U_201201_044215/96076232/ccs	chr5	+	2662	9	NIC	ENSMUSG00000025340.15	novel	2690	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	67	junction_3	37.9637985454564	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTGGTTTTGTTTTGT	NA	False	NA	16	True	AATAAA	-38	NA	130200664	130243178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_130200736_130216241_130216428_130219717_130219885_130226787_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
m54284U_201201_044215/96076843/ccs	chr17	-	3286	9	NIC	ENSMUSG00000052105.18	novel	7221	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_5	65.5858216385218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGAAATTGTAGTACAGT	NA	False	NA	-5	True	AATAAA	-19	NA	66756745	66654960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66692854_66692915_66743074_66743234_66745161_66745387_66755311
m54284U_201201_044215/96144142/ccs	chr3	+	2971	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	125.247595023504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600390_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201201_044215/96207264/ccs	chr17	-	170	1	Intergenic	novelGene_8500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGGATTCGAGGTTAGAA	1282	False	NA	NA	False	NA	NA	NA	29851473	29851303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29851300_29851500
m54284U_201201_044215/96209330/ccs	chr14	-	5532	25	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	61.4828340993556	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256086	26134329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
m54284U_201201_044215/96274997/ccs	chr2	+	4931	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	59.0850112021047	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4642	False	NA	12	True	AATAAA	-16	NA	18069446	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201201_044215/96339196/ccs	chr5	-	1704	9	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_1	1712.55153207137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126797	100108860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
m54284U_201201_044215/96339271/ccs	chr7	+	1712	4	NIC	ENSMUSG00000002083.14	novel	485	3	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	92.4589999224882	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTTTTGTTAGCTTTA	NA	False	NA	26	True	AATAAA	-19	NA	16044319	16052130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16044464_16046050_16046340_16047551_16047743_16051042
m54284U_201201_044215/96340622/ccs	chr14	+	953	8	NIC	ENSMUSG00000039197.11	novel	1782	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	129.691313258421	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTTCTTCCCAACTA	NA	False	NA	NA	False	ATTAAA	-16	NA	21102678	21376861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21376659
m54284U_201201_044215/9634973/ccs	chr5	-	5635	15	NNC	ENSMUSG00000042121.17	novel	8436	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	104.498535289022	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114131828	114077825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_114081527_114084336_114084890_114088446_114088645_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
m54284U_201201_044215/9635510/ccs	chr17	-	5981	21	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_20	62.1417733895646	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503696	32415247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503491
m54284U_201201_044215/96405552/ccs	chr5	-	1794	9	NIC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_1	1723.73333476353	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126797	100108860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100109193_100109956_100110064_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
m54284U_201201_044215/96665965/ccs	chr2	-	4143	15	NIC	ENSMUSG00000038369.15	novel	7101	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_14	51.9731582999674	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGTATGTTATTGGA	NA	False	NA	-19	True	AATAAA	-17	NA	155315744	155232584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282607_155282706_155291202_155291272_155315559
m54284U_201201_044215/96731310/ccs	chr17	+	3458	20	ISM	ENSMUSG00000033826.11	ENSMUST00000235507.2	13457	83	17	131702	0	60	5prime_fragment	TRUE	canonical	3	31	junction_2	9.07494190819529	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTGGGTCCTTTCCCTC	217	False	NA	NA	False	AATAAA	-23	NA	30845926	30903585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_30846117_30854294_30854808_30854915_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104
m54284U_201201_044215/96732246/ccs	chr9	-	210	1	Intergenic	novelGene_4854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACACTGACCAGGACAATT	NA	False	NA	NA	False	NA	NA	NA	63325364	63325154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_63325200_63325400
m54284U_201201_044215/96796769/ccs	chr2	+	2620	4	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	80.6735534250365	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682941	156697490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156683011_156686075_156686302_156695048_156695149_156695265
m54284U_201201_044215/96796902/ccs	chr19	-	3689	24	NIC	ENSMUSG00000024827.11	novel	3767	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_20	307.561640278642	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGAATTTCCCATTTGATT	NA	False	NA	-7	True	AATAAA	-16	NA	30152829	30075846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30128821_30128987_30135913_30136050_30151823_30151903_30152390
m54284U_201201_044215/96797110/ccs	chr1	+	1657	8	NIC	ENSMUSG00000026096.15	novel	1723	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	46.6559268496949	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCATTTCGTGTTTCA	NA	False	NA	11	True	AATAAA	-31	NA	53352812	53365326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_53353018_53354014_53354259_53357065_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
m54284U_201201_044215/96797456/ccs	chr19	-	182	1	Intergenic	novelGene_9215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	32655839	32655657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_32655700_32655800
m54284U_201201_044215/96797509/ccs	chr3	-	182	1	Intergenic	novelGene_1460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	86124153	86123971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_86124000_86124200
m54284U_201201_044215/96798828/ccs	chr16	+	1767	10	NIC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	-136	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	883.776590393972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGGGCCCGCAGAG	1394	False	NA	NA	False	AATAAA	-26	NA	20354268	20362670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
m54284U_201201_044215/96799435/ccs	chr18	-	184	1	Intergenic	novelGene_8975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTTTTAAGTACAAGAA	5531	False	NA	NA	False	NA	NA	NA	61646925	61646741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_61646700_61646900
m54284U_201201_044215/96862860/ccs	chr12	+	3406	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-585	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	508.083821891651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGAGTTAAATTATT	NA	False	NA	36	True	AATAAA	-30	NA	105750991	105802532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
m54284U_201201_044215/96863433/ccs	chr2	-	183	1	Intergenic	novelGene_1125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAGAAACAAAC	5391	False	NA	NA	False	NA	NA	NA	152338704	152338521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_152338500_152338700
m54284U_201201_044215/96864079/ccs	chr5	-	2327	15	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_14	565.543210063546	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTGTTAATAACTCT	2872	False	NA	-25	True	AATAAA	-15	NA	138169528	138162861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169449
m54284U_201201_044215/96993964/ccs	chr8	-	196	1	Intergenic	novelGene_4243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTGACTAGGATAAGGG	NA	False	NA	NA	False	NA	NA	NA	26438601	26438405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_26438400_26438600
m54284U_201201_044215/96993988/ccs	chr4	-	1814	9	NIC	ENSMUSG00000006398.16	novel	1793	10	NA	NA	54	0	intron_retention	FALSE	canonical	3	1488	junction_3	110.596606525698	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGCATCCTTCCTAC	NA	False	NA	-11	True	AATAAA	-17	NA	118294495	118290097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
m54284U_201201_044215/96994510/ccs	chr15	-	931	9	NIC	ENSMUSG00000022635.10	novel	877	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	285.365965691426	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTGTGGAATAGTGAC	NA	False	NA	-11	True	AATAAA	-17	NA	93296215	93283990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93291587_93291646_93293467_93293497_93295050_93295137_93296043
m54284U_201201_044215/96994822/ccs	chrX	-	1626	1	Intergenic	novelGene_9370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	8741	False	NA	NA	False	NA	NA	NA	7919775	7918149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_7918100_7919800
m54284U_201201_044215/9700222/ccs	chr5	+	3745	19	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	280.328973410408	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186306	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_139186455_139200912_139201010_139209354_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201201_044215/97059615/ccs	chr3	+	2420	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	416	junction_13	332.523108563197	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGTAAAGGATTCAT	NA	False	NA	43	True	AATAAA	-33	NA	151916118	151938426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
m54284U_201201_044215/97126746/ccs	chr12	-	3052	3	NIC	ENSMUSG00000062929.9	novel	2940	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	292	junction_2	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAAGCTGTTGAGATG	NA	False	NA	-11	True	AATAAA	-12	NA	54909662	54905601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_54908023_54908121_54908619_54909528
m54284U_201201_044215/97190628/ccs	chr15	+	593	4	NNC	ENSMUSG00000041841.9	novel	556	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	9909.82187304876	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTGGTGATCTAAG	2248	False	NA	34	True	AATAAA	-15	NA	5146126	5148157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_5146390_5146768_5146905_5147100_5147186_5148048
m54284U_201201_044215/97191451/ccs	chr18	+	183	1	Intergenic	novelGene_8887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAACAAAACAAAACTG	NA	False	NA	NA	False	NA	NA	NA	35365419	35365602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35365400_35365600
m54284U_201201_044215/97191492/ccs	chr9	+	4392	26	NIC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	20	junction_13	173.83231460232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290786	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296569_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
m54284U_201201_044215/97256546/ccs	chr2	+	3660	20	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	351.666645223685	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201201_044215/97387039/ccs	chrX	+	3205	15	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1538	junction_14	85.3986151491214	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201201_044215/97388032/ccs	chr1	+	4334	30	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	91	junction_2	22.942776355976	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10109997	10206993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
m54284U_201201_044215/97388135/ccs	chr16	+	1296	10	NIC	ENSMUSG00000039345.17	novel	1825	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_3	49.6680337868021	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCTTGCCCTTGAGAT	NA	False	NA	3	True	AATAAA	-12	NA	8288651	8308060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_8288730_8291694_8291831_8295830_8296194_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
m54284U_201201_044215/97452189/ccs	chr1	+	3419	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	0	-159	intron_retention	FALSE	canonical	3	1145	junction_2	102.114276395551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCCTTTTCAGAAGTGT	NA	False	NA	10	True	ATTAAA	-20	NA	151220259	151240007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
m54284U_201201_044215/97454434/ccs	chrX	+	5714	16	NIC	ENSMUSG00000000838.18	novel	4409	17	NA	NA	63	0	intron_retention	FALSE	canonical	3	496	junction_11	115.067979907531	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722292	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67749466_67749530_67751647_67751735_67754189_67756020_67756846_67756930_67759170
m54284U_201201_044215/97518305/ccs	chr8	+	979	9	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	436.980477252703	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATACCCACCAGGC	707	False	NA	29	True	AATAAA	-18	NA	70755422	70765643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70765355_70765431_70765508
m54284U_201201_044215/97519235/ccs	chr19	-	1258	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	123	junction_9	336.420298561116	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	5822	False	NA	-6	True	AGTAAA	-15	NA	46327099	46318982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46326958
m54284U_201201_044215/97583223/ccs	chr16	-	2589	21	Fusion	ENSMUSG00000055497.6_ENSMUSG00000022771.18	novel	3088	20	NA	NA	0	-415	multi-exon	FALSE	canonical	3	6	junction_1	167.198415064258	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGTGTTCTGTGGTGCT	NA	False	NA	NA	False	NA	NA	NA	16929121	16900277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr16_-_16901193_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
m54284U_201201_044215/97583806/ccs	chr8	+	178	1	Intergenic	novelGene_4518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAAAAAGATT	NA	False	NA	NA	False	NA	NA	NA	112583281	112583459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112583300_112583500
m54284U_201201_044215/97584180/ccs	chrX	+	154	1	Intergenic	novelGene_9528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92253042	92253196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_92253000_92253200
m54284U_201201_044215/97584637/ccs	chrX	+	193	1	Intergenic	novelGene_9721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGCCACTGGATGGG	NA	False	NA	NA	False	NA	NA	NA	161597320	161597513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_161597300_161597500
m54284U_201201_044215/97649203/ccs	chr7	-	178	1	Intergenic	novelGene_3859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAAACGTCTAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	49163038	49162860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_49162900_49163000
m54284U_201201_044215/97847851/ccs	chr14	+	3632	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	115.755707172092	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043975	32070108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_32043983_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
m54284U_201201_044215/97910904/ccs	chr8	+	2188	17	NIC	ENSMUSG00000060098.12	novel	3472	18	NA	NA	0	-1100	combination_of_known_splicesites	FALSE	canonical	3	37	junction_16	255.302516634678	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGTGGCTCAATGGGG	1906	False	NA	26	True	AATAAA	-27	NA	106937654	106978326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106978110
m54284U_201201_044215/97976356/ccs	chr2	+	5570	38	NNC	ENSMUSG00000074652.4	novel	667	3	NA	NA	2453	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	16.9925003867506	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCCACTGTCCTTATTT	NA	False	NA	11	True	AATAAA	-16	NA	155455584	155476123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_155455656_155455958_155456116_155456387_155456416_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
m54284U_201201_044215/97978711/ccs	chr4	-	1747	8	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	146.72367475869	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682904	120614634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120647573_120647687_120682726
m54284U_201201_044215/97979099/ccs	chr14	+	3347	4	NNC	ENSMUSG00000005148.9	novel	3352	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	1650.0496962213	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTGCCTTCTTGACCC	NA	False	NA	22	True	AATAAA	-18	NA	99536126	99552472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_99536659_99538821_99539691_99540853_99540914_99550586
m54284U_201201_044215/98109524/ccs	chr4	-	1111	6	NNC	ENSMUSG00000055401.15	novel	811	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	346.367665927407	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTTGAGGGCTTACA	NA	False	NA	-17	True	AATAAA	-17	NA	148236382	148230243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_148230612_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236286
m54284U_201201_044215/98175147/ccs	chr2	+	3033	17	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	169.05232178234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	634	False	NA	36	True	AATAAA	-37	NA	31462803	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31462966_31473166_31473273_31485271_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
m54284U_201201_044215/98304201/ccs	chrM	+	764	1	Intergenic	novelGene_9742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTAGTTCCCAAAATATG	11	True	NA	148	True	NA	NA	NA	15423	16187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrM_+_15400_16200
m54284U_201201_044215/98304377/ccs	chr2	+	3207	8	NNC	ENSMUSG00000027367.17	novel	3116	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_2	129.050852182307	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAGAGTGTTCATTTCT	NA	False	NA	9	True	AATAAA	-16	NA	127112148	127140852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127112801_127126014_127126224_127126360_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
m54284U_201201_044215/98306308/ccs	chr15	-	1028	9	NIC	ENSMUSG00000055762.17	novel	2842	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_5	1349.65903101487	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGCCTCTTGTGTTACTT	NA	False	NA	-6	True	ATTAAA	-16	NA	75781146	75767336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75769074_75769132_75772539_75772612_75772980_75773105_75781093
m54284U_201201_044215/983160/ccs	chr6	-	871	1	Antisense	novelGene_ENSMUSG00000030330.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGCTTCACAGCCTAG	NA	False	NA	NA	False	NA	NA	NA	125023237	125022366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_125022400_125023200
m54284U_201201_044215/98369868/ccs	chr6	+	2279	9	NNC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_8	309.370909063861	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746126	106759435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758611
m54284U_201201_044215/98372163/ccs	chr11	+	179	2	Antisense	novelGene_ENSMUSG00000093978.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	120	junction_1	0	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGCAGAGGCT	4091	False	NA	NA	False	NA	NA	NA	60458713	60566996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_60458766_60566869
m54284U_201201_044215/98437841/ccs	chr4	-	1321	8	NIC	ENSMUSG00000057236.11	novel	4407	12	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	365.178904994608	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCCATGCTGGTGGGTT	2556	False	NA	-29	True	AATAAA	-14	NA	129229099	129203309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129203670_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
m54284U_201201_044215/98500748/ccs	chr18	+	3361	10	NIC	ENSMUSG00000024423.7	novel	3763	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	256.284130518367	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTATGGCTACATTGCA	NA	False	NA	16	True	NA	NA	NA	13105328	13126007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_13105430_13107769_13107899_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
m54284U_201201_044215/98566379/ccs	chr17	+	3358	17	NNC	ENSMUSG00000001228.15	novel	3402	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	716.894169316504	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201201_044215/98567360/ccs	chr8	+	1811	9	NIC	ENSMUSG00000055681.15	novel	1300	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1283	junction_8	36.3180395946698	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGATACCCACCAGGC	707	False	NA	29	True	AATAAA	-18	NA	70755422	70765643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70755583_70757283_70757347_70758284_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
m54284U_201201_044215/98568734/ccs	chr14	-	2265	7	NIC	ENSMUSG00000044350.15	novel	2444	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	20.3258182833776	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTATCCATTCCTTT	NA	False	NA	1	True	NA	NA	NA	77274081	77261639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273936
m54284U_201201_044215/98631752/ccs	chr7	-	2140	13	NIC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	122.006830409886	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976622	125969238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008_125976218_125976289
m54284U_201201_044215/98634273/ccs	chr5	+	1913	13	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	0	255	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	210.460655467952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	20	True	AATAAA	-21	NA	124717228	124734905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727328_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
m54284U_201201_044215/98697284/ccs	chr12	+	3100	10	NIC	ENSMUSG00000036257.16	novel	13507	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_9	85.0700510182456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATATGAAAAAACTGGAC	NA	False	NA	NA	False	ATTAAA	-15	NA	44315930	44358875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354931_44358107
m54284U_201201_044215/98697337/ccs	chr11	+	1316	7	NIC	ENSMUSG00000036309.15	novel	1440	6	NA	NA	0	-185	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	2365.51336335735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTATGTCATCTTTTT	439	False	NA	13	True	ATTAAA	-16	NA	52122863	52137500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_52122946_52127663_52127761_52128210_52128300_52133413_52133488_52134441_52134586_52135807_52135949_52136811
m54284U_201201_044215/98828810/ccs	chr15	-	2811	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	27	junction_4	205.739432986762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614102	81588453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
m54284U_201201_044215/98831075/ccs	chr16	+	5426	32	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	236	junction_1	347.040851712798	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201201_044215/98831105/ccs	chr11	-	1775	7	NIC	ENSMUSG00000042032.14	novel	1949	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	215.301081176002	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGGCTTTATTTTGTA	NA	False	NA	-12	True	AATAAA	-18	NA	40583455	40570140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576141_40578427_40578623_40583304
m54284U_201201_044215/98894729/ccs	chr8	+	1334	4	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	-93	283	multi-exon	FALSE	canonical	3	112	junction_3	241.687125570781	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCATGTGGGCATTCAAA	NA	False	NA	NA	False	AATAAA	-7	NA	20697891	20727549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717493_20727081
m54284U_201201_044215/98895020/ccs	chr12	-	2251	5	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_3	376.663643055711	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111636449_111636595_111638014_111638199_111638408_111638663
m54284U_201201_044215/98895430/ccs	chr17	+	2279	10	NIC	ENSMUSG00000002280.12	novel	2062	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	241	junction_4	18.6368809979925	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTGTCTGGTACC	6948	False	NA	11	True	AATAAA	-23	NA	25992777	26001770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_26000353_26000661_26000820_26000989
m54284U_201201_044215/98959683/ccs	chr17	+	170	1	Intergenic	novelGene_8536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATGTCAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	33991996	33992166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_33992000_33992200
m54284U_201201_044215/9896013/ccs	chr10	-	199	1	Intergenic	novelGene_5606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCAAGAAATATAGCTGA	NA	False	NA	NA	False	NA	NA	NA	127406802	127406603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127406600_127406800
m54284U_201201_044215/9896813/ccs	chr8	-	158	1	Intergenic	novelGene_4574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCATTCAATGGG	NA	False	NA	-1	True	NA	NA	NA	123585218	123585060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_123585100_123585200
m54284U_201201_044215/99025120/ccs	chr3	+	3052	9	NIC	ENSMUSG00000000340.11	novel	3301	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	69.7387983836831	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATGCCTTCATAGTA	NA	False	NA	10	True	AATAAA	-19	NA	116306767	116343630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_116306841_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
m54284U_201201_044215/99027122/ccs	chr6	+	4881	28	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	35	junction_15	73.2858432087318	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7539	False	NA	13	True	AATAAA	-17	NA	146789984	146933523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146914415_146914446_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
m54284U_201201_044215/99092465/ccs	chr7	+	1350	8	NIC	ENSMUSG00000019737.15	novel	1355	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	67.7673089569396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGAGAATATCAGTACT	NA	False	NA	11	True	ATTAAA	-18	NA	30014240	30018471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_30014512_30014686_30014826_30015654_30015799_30015997_30016193_30016267_30016517_30017392_30017468_30018102_30018157_30018248
m54284U_201201_044215/99092955/ccs	chr6	+	2258	17	NIC	ENSMUSG00000030281.17	novel	2302	17	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	10.8137643769411	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTAGCACTCGTGTATC	5827	False	NA	6	True	AATAAA	-21	NA	113448458	113460101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453359_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
m54284U_201201_044215/99093012/ccs	chr18	-	187	1	Intergenic	novelGene_9006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCCTCGTTGTTATTA	NA	False	NA	NA	False	NA	NA	NA	68038191	68038004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_68038000_68038200
m54284U_201201_044215/99093079/ccs	chr11	-	269	1	Intergenic	novelGene_5837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGATGTTTTTATACCTT	NA	False	NA	NA	False	NA	NA	NA	53572295	53572026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_53572000_53572300
m54284U_201201_044215/99156064/ccs	chr14	+	4366	40	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	174.327531101471	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
m54284U_201201_044215/99221594/ccs	chr9	-	215	1	Intergenic	novelGene_4848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCTAAAGGACGCCTG	NA	False	NA	NA	False	NA	NA	NA	62760326	62760111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_62760100_62760300
m54284U_201201_044215/99222404/ccs	chr7	-	4709	32	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	47.2511389838992	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
m54284U_201201_044215/99289409/ccs	chr17	+	1092	6	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1493	junction_5	178.399103136759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47679880_47683351_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
m54284U_201201_044215/99352693/ccs	chr16	-	3076	9	NIC	ENSMUSG00000022704.17	novel	3856	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	31	junction_3	44.3163344603319	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGCTGTGCATTGTTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	43710048	43681769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43696991_43697205_43698319_43698397_43700661_43700718_43701330_43701577_43709929
m54284U_201201_044215/99352909/ccs	chr17	+	1855	5	NIC	ENSMUSG00000041199.4	novel	1531	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_1	16.0682139642214	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAGAGTGACCATGAGC	NA	False	NA	18	True	AATAAA	-15	NA	25946705	25950432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25946822_25947176_25947621_25947799_25947903_25948041_25948144_25949342
m54284U_201201_044215/99353029/ccs	chr2	-	166	1	Intergenic	novelGene_1198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAAAAAAATGTGATG	NA	False	NA	NA	False	NA	NA	NA	159348573	159348407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_159348400_159348600
m54284U_201201_044215/99354911/ccs	chr12	+	2294	4	NNC	ENSMUSG00000037957.15	novel	2384	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	65.1357556697292	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTTGTAGAACTCTGAT	5346	False	NA	19	True	AATAAA	-18	NA	110704425	110761462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_110704712_110745729_110745913_110759547_110760202_110760291
m54284U_201201_044215/99419490/ccs	chr11	+	3877	18	NNC	ENSMUSG00000020705.7	novel	445	2	NA	NA	-470	0	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	112.518818110864	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107281	106139965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_106107379_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
m54284U_201201_044215/99420392/ccs	chr8	+	4526	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.4717219141608	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	14	True	AGTAAA	-15	NA	88925840	88986350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_88925942_88926656_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
m54284U_201201_044215/99549620/ccs	chr3	+	2930	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	0	0	multi-exon	FALSE	canonical	3	36	junction_12	346.814558446064	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89072101	89090072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr3_+_89072414_89074341_89074512_89076004_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
m54284U_201201_044215/99549799/ccs	chrX	-	172	1	Intergenic	novelGene_9433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAACAGA	NA	False	NA	NA	False	NA	NA	NA	37881261	37881089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_37881100_37881300
m54284U_201201_044215/99549931/ccs	chr7	-	3062	8	NIC	ENSMUSG00000008435.16	novel	3034	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	9.2493794607078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTGTCATTGTCCTTT	NA	False	NA	-2	True	AATAAA	-22	NA	4448641	4428665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4446735_4446771_4447201_4447321_4448445
m54284U_201201_044215/99550094/ccs	chr3	+	3831	25	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	54.7622227604639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6947	False	NA	16	True	AATAAA	-20	NA	20111983	20172654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
m54284U_201201_044215/99551418/ccs	chr16	-	2817	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	298.399463806489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6230	False	NA	-4	True	NA	NA	NA	38370620	38345501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355024_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
m54284U_201201_044215/99551713/ccs	chr18	-	163	1	NIC	ENSMUSG00000117674.2	novel	647	4	NA	NA	15559	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAACAAACAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	40375989	40375826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_40375800_40376000
m54284U_201201_044215/99551890/ccs	chr1	-	10084	32	NIC	ENSMUSG00000009418.17	novel	9353	31	NA	NA	-57	503	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	20.5943426962992	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCTGATGTCTGTGCA	NA	False	NA	-9	True	AATAAA	-26	NA	135615900	135366082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
m54284U_201201_044215/9962838/ccs	chr7	-	175	1	Intergenic	novelGene_4004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTACTATATTACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	107871147	107870972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_107871000_107871100
m54284U_201201_044215/99682375/ccs	chr5	+	3952	16	NIC	ENSMUSG00000029106.15	novel	4007	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_12	159.558752676108	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGGGGCAACTTTGCAT	NA	False	NA	26	True	AATAAA	-27	NA	34731112	34789652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34787813
m54284U_201201_044215/99682921/ccs	chr10	-	2423	7	NIC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	324.615884118788	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCCTTGCGTGTGGGT	NA	False	NA	-4	True	AATAAA	-43	NA	82599978	82584534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82592535_82592630_82597666_82597748_82599837
m54284U_201201_044215/99746578/ccs	chr10	-	6643	11	NIC	ENSMUSG00000055531.13	novel	2227	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_6	232.89227123286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATACTTTGCAGTTTGTT	4471	False	NA	-12	True	AATAAA	-13	NA	117212878	117180577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
m54284U_201201_044215/99812900/ccs	chr12	+	2458	6	ISM	ENSMUSG00000079179.10	ENSMUST00000179924.8	823	8	-389	6827	0	1707	5prime_fragment	FALSE	canonical	3	23	junction_5	69.4682661364166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACAAGACTGTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	3285525	3293117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028_3288113_3288833_3289010_3291521
m54284U_201201_044215/99812972/ccs	chr4	-	2580	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	5402	junction_3	206.717778625836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994325	150981589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150991599_150992774_150992881_150994239
m54284U_201201_044215/99878524/ccs	chr10	+	1492	9	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	86	intron_retention	FALSE	canonical	3	1673	junction_5	35.3120022088808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTTGGTTGTTCTGTCCC	2289	False	NA	36	True	ACTAAA	-24	NA	79795988	79803531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802561_79803153_79803223_79803304
m54284U_201201_044215/99943521/ccs	chr14	-	2638	17	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	32	junction_16	184.440327409707	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	4827	False	NA	-11	True	AATAAA	-25	NA	54754850	54744643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
m54284U_201201_044215/99944986/ccs	chr10	-	2508	8	NNC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_7	395.995464826638	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8247	False	NA	-21	True	ATTAAA	-15	NA	128540900	128533812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540479
m54284U_201201-1_044215/100532408/ccs	chr2	-	3318	11	NIC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	483	junction_1	60.3850974993003	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174332	152158253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
m54284U_201201-1_044215/101187981/ccs	chr3	-	3968	27	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	243.868307656591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3507	False	NA	99	True	AAAAAG	-18	NA	89959822	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201-1_044215/106693805/ccs	chr19	+	5674	12	ISM	ENSMUSG00000045098.20	ENSMUST00000113973.8	6130	13	748	-1	0	0	3prime_fragment	FALSE	canonical	3	50	junction_2	95.0458784391225	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGTGTTCACTGTA	NA	False	NA	NA	False	AATAAA	-18	NA	3818168	3868303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
m54284U_201201-1_044215/109838530/ccs	chr13	-	3511	14	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	186	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_7	408.363554812875	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626376	111562213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
m54284U_201201-1_044215/110429610/ccs	chr15	-	3809	4	NIC	ENSMUSG00000053929.18	novel	3959	5	NA	NA	0	-383	combination_of_known_junctions	TRUE	canonical	3	230	junction_1	231.34534070663	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAAGTGTTTTTATGGTT	NA	False	NA	-4	True	AATAAA	-20	NA	76541120	76527977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
m54284U_201201-1_044215/112591965/ccs	chr15	-	4669	14	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	220.32512286009	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618436	88571236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88596818_88596968_88597057_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
m54284U_201201-1_044215/112986121/ccs	chr10	+	2645	14	NNC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_8	249.821972115103	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGCCTTGTGTCTCT	6990	False	NA	NA	False	AATAAA	-16	NA	60113449	60138376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135245_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
m54284U_201201-1_044215/11469783/ccs	chr12	+	2365	19	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	85.0941562746747	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622416	3831398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
m54284U_201201-1_044215/116916922/ccs	chr13	-	2578	21	NIC	ENSMUSG00000021196.15	novel	4145	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_6	289.380247252642	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	False	NA	-14	True	ATTAAA	-10	NA	6698813	6631217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
m54284U_201201-1_044215/116982816/ccs	chr15	-	2462	8	NNC	ENSMUSG00000022387.18	novel	3259	12	NA	NA	-7493	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	226.062480075662	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	7649	False	NA	-5	True	NA	NA	NA	88592560	88571236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585081_88591236_88591498_88592440
m54284U_201201-1_044215/120064346/ccs	chr1	-	5752	24	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-166	-729	combination_of_known_junctions	FALSE	canonical	3	62	junction_17	27.0440374610156	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	252	False	NA	-2	True	AATAAA	-23	NA	161704417	161644411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
m54284U_201201-1_044215/12058917/ccs	chr17	-	2525	7	NIC	ENSMUSG00000015120.16	novel	1138	7	NA	NA	0	1406	combination_of_known_junctions	FALSE	canonical	3	247	junction_6	1729.90957535037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGGTTGTGTCCTCT	4530	False	NA	-1	True	ATTAAA	-19	NA	25492574	25479483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492455
m54284U_201201-1_044215/12322451/ccs	chr8	+	4674	18	NIC	ENSMUSG00000001472.18	novel	2738	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_17	123.528291311445	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGGTGATATGGCC	NA	False	NA	12	True	AAGAAA	-17	NA	124100562	124130549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127796
m54284U_201201-1_044215/123275931/ccs	chr7	+	3882	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_1	73.3327272702229	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247658	130366515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130248161_130276331_130276470_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
m54284U_201201-1_044215/12452743/ccs	chr7	-	2096	8	NIC	ENSMUSG00000030689.16	novel	1973	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	206	junction_2	316.419574202949	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	9163	False	NA	-4	True	ATTAAA	-26	NA	126461041	126450756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126452164_126452660_126452753_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
m54284U_201201-1_044215/124781510/ccs	chr11	-	5139	13	NIC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_10	65.4221335295292	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	8169	False	NA	-2	True	NA	NA	NA	104333117	104224326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104332550
m54284U_201201-1_044215/125110133/ccs	chr1	-	2934	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	123	junction_19	206.17340683078	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215992	63182754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215586
m54284U_201201-1_044215/129041282/ccs	chr3	+	1636	9	NNC	ENSMUSG00000027706.9	novel	3967	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_8	221.180356270624	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGACAATTTGCTGTTC	NA	False	NA	-51	True	GGGGCT	-28	NA	30847484	30874181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873086_30873724
m54284U_201201-1_044215/129108005/ccs	chr14	-	2593	8	NIC	ENSMUSG00000060373.16	novel	2617	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1620	junction_2	930.149406475834	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGAAGCTGGTGTGT	8725	False	NA	-38	True	AATAAA	-19	NA	52341485	52311001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
m54284U_201201-1_044215/129368269/ccs	chr12	+	4283	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_10	142.341791458334	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3986	False	NA	13	True	AATAAA	-13	NA	83679030	83729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
m54284U_201201-1_044215/131204523/ccs	chr11	-	3045	11	NNC	ENSMUSG00000000782.17	novel	2059	11	NA	NA	-56	85	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_1	46.9302674187991	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTGAGTAGCTGTTT	NA	False	NA	-4	True	AATAAA	-26	NA	52174214	52143112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_52144790_52145925_52145999_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151449_52152339_52152452_52172948_52173074_52173538_52173606_52173754
m54284U_201201-1_044215/137037968/ccs	chr1	-	4057	16	NNC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	97.3165738995961	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853651	33800625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_33801291_33803594_33803651_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
m54284U_201201-1_044215/137758109/ccs	chr6	+	2460	11	ISM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	449	1135	0	0	3prime_fragment	FALSE	canonical	3	141	junction_5	14.2562267097574	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCGTGATGTGGCAGTTA	-7	True	NA	22	True	AATATA	-21	NA	21950018	21974902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
m54284U_201201-1_044215/139396328/ccs	chr1	-	5731	23	NIC	ENSMUSG00000040297.13	novel	6327	24	NA	NA	-166	-729	combination_of_known_junctions	FALSE	canonical	3	57	junction_12	29.1913394266289	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTCTTCTGTCCTT	252	False	NA	-2	True	AATAAA	-23	NA	161704417	161644411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680505_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
m54284U_201201-1_044215/140771401/ccs	chr2	+	8410	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_16	144.087250696058	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962843	52012395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201201-1_044215/14155854/ccs	chr7	-	2799	10	NIC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	88	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	198.720599191956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAACTATTTTGGTT	NA	False	NA	-11	True	AATAAA	-33	NA	34089024	34044070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
m54284U_201201-1_044215/14156756/ccs	chr3	+	5260	7	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_2	168.232395479851	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237399	16271201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_16237685_16238085_16238111_16241130_16241280_16243641_16243728_16257350_16257384_16257989_16259589_16268118
m54284U_201201-1_044215/142017496/ccs	chr1	-	2845	7	NNC	ENSMUSG00000025937.7	novel	4494	7	NA	NA	0	-1515	at_least_one_novel_splicesite	FALSE	canonical	3	146	junction_6	847.959003857039	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTCTCATCTTTAACCA	NA	False	NA	NA	False	NA	NA	NA	13730770	13695068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730686
m54284U_201201-1_044215/142671961/ccs	chr3	+	2465	2	ISM	ENSMUSG00000105960.2	ENSMUST00000199846.2	3871	5	4162	0	4162	0	3prime_fragment	FALSE	canonical	3	92	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCAGCACTGTCTAAT	NA	False	NA	2	True	NA	NA	NA	129551568	129557533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_129551788_129555287
m54284U_201201-1_044215/142934132/ccs	chr19	-	5161	26	NNC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_24	212.273385990802	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGCTTTGTGTTGTGTG	NA	False	NA	-2	True	AATAAA	-18	NA	37340010	37246141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37321323_37321426_37339912
m54284U_201201-1_044215/143722632/ccs	chr11	-	5617	19	NIC	ENSMUSG00000034354.18	novel	5674	18	NA	NA	0	-194	combination_of_known_junctions	FALSE	canonical	3	60	junction_3	50.097466730759	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTTTTGATCAATGAAG	NA	False	NA	NA	False	AATAAA	-16	NA	4544863	4431083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_4432940_4435362_4435452_4435878_4435990_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
m54284U_201201-1_044215/144640781/ccs	chr10	-	3397	14	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_2	28.6420471318886	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	9981	False	NA	-46	True	AATAAA	-14	NA	80512127	80501160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
m54284U_201201-1_044215/145491755/ccs	chr11	+	4422	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-3959	intron_retention	FALSE	canonical	3	6361	junction_6	598.042047016763	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCATCTGGCAATGT	NA	False	NA	13	True	ATTAAA	-14	NA	55360543	55391705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
m54284U_201201-1_044215/146409773/ccs	chr9	+	3458	10	Fusion	ENSMUSG00000103970.2_ENSMUSG00000006673.15	novel	756	3	NA	NA	0	0	multi-exon	FALSE	canonical	3	32	junction_1	198.101046669012	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1659	False	NA	64	True	NA	NA	NA	108394797	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_+_108395176_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201201-1_044215/148704063/ccs	chr7	+	1212	5	ISM	ENSMUSG00000030825.20	ENSMUST00000210997.2	1315	9	3162	-3	0	0	3prime_fragment	FALSE	canonical	3	557	junction_3	22.2864869371554	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGAGTGGTCGTGTCCT	NA	False	NA	10	True	NA	NA	NA	45208629	45216745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
m54284U_201201-1_044215/149096055/ccs	chr15	+	4213	19	NIC	ENSMUSG00000035900.19	novel	4292	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	6.93265666213622	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTGTTCTTAGCTGA	NA	False	NA	NA	False	AATAAA	-29	NA	85942927	86021835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
m54284U_201201-1_044215/149948038/ccs	chr13	-	3408	4	ISM	ENSMUSG00000113047.2	ENSMUST00000222092.2	704	5	382	-2773	0	2583	3prime_fragment	FALSE	canonical	3	33	junction_3	16.8720676464584	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTCTGACTCTCCAGTT	NA	False	NA	-2	True	ATTAAA	-18	NA	74711993	74699445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_74702530_74703925_74703987_74704201_74704329_74711857
m54284U_201201-1_044215/150407997/ccs	chr4	+	5005	14	NIC	ENSMUSG00000042408.14	novel	3922	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_3	8.41103811251486	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTTATGTTGGTGATT	2758	False	NA	19	True	NA	NA	NA	126971189	127018165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126972340_126980767_126980835_126982121_126982348_126986704_126986877_126994402_126994554_126995641_126995758_126997204_126997481_126998063_126998215_126999066_126999240_127000368_127000517_127002340_127002509_127003717_127003756_127014220_127014366_127016141
m54284U_201201-1_044215/150602235/ccs	chr4	+	1942	7	Intergenic	novelGene_2447	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	81	junction_5	9.7581874455363	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGGGTCATTTTTG	NA	False	NA	NA	False	NA	NA	NA	156390363	156410435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156408565_156408842_156409051_156409451
m54284U_201201-1_044215/151585353/ccs	chr15	-	3035	18	NIC	ENSMUSG00000023015.15	novel	2933	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_16	197.839524637143	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGATGTTGGTTTTCTTGT	NA	False	NA	-1	True	AATAAA	-19	NA	99549537	99518377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541302_99541405_99549387
m54284U_201201-1_044215/152502298/ccs	chr4	-	7192	30	NNC	ENSMUSG00000042446.17	novel	7102	30	NA	NA	-93	0	at_least_one_novel_splicesite	FALSE	canonical	3	165	junction_15	36.0808643919119	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGAGTTCTTTTTCTTT	NA	False	NA	-10	True	AATAAA	-20	NA	126862021	126755731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
m54284U_201201-1_044215/153158965/ccs	chr16	-	669	3	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-65	-42821	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_1	174.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	8610237	8566644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_8566919_8574679_8574937_8610099
m54284U_201201-1_044215/154730847/ccs	chr5	-	2571	8	NIC	ENSMUSG00000029328.16	novel	2752	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_7	355.117974073693	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTAAGTCTTGCTAT	NA	False	NA	-14	True	AATAAA	-18	NA	100186754	100181435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186432
m54284U_201201-1_044215/15599882/ccs	chr4	+	4857	24	NIC	ENSMUSG00000028552.14	novel	5190	25	NA	NA	0	-151	combination_of_known_junctions	TRUE	canonical	3	29	junction_23	34.4426868398588	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGCATTGAAACTTT	NA	False	NA	18	True	AATAAA	-28	NA	109137464	109244863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109242515
m54284U_201201-1_044215/156961340/ccs	chr7	+	1557	5	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	277.472859033095	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_138448245_138448340_138448434_138475817_138476014_138478184_138478447_138483937
m54284U_201201-1_044215/158204821/ccs	chr3	-	4820	10	NIC	ENSMUSG00000019338.14	novel	4632	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_9	41.4428060444694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94922529	94913900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94921143_94921240_94922421
m54284U_201201-1_044215/159516153/ccs	chr18	+	3717	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	152.096862628069	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	12	True	NA	NA	False	AATAAA	-22	NA	7869196	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_7869616_7869990_7870028_7871530_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
m54284U_201201-1_044215/159713873/ccs	chr17	-	3626	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	0	1132	combination_of_known_junctions	FALSE	canonical	3	30	junction_8	27.2488531868774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGCTCATTTCCCAAC	NA	False	NA	-33	True	NA	NA	NA	95057369	95033380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056864
m54284U_201201-1_044215/159845155/ccs	chr6	+	3407	9	NIC	ENSMUSG00000030232.19	novel	2575	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_8	102.668687412473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGATGACTGTGGTTC	NA	False	NA	8	True	NA	NA	NA	140569224	140601207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140570071_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140599483
m54284U_201201-1_044215/163449033/ccs	chr15	+	3283	12	NIC	ENSMUSG00000022253.18	novel	4135	13	NA	NA	62	307	combination_of_known_junctions	FALSE	canonical	3	231	junction_7	43.3900243705397	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTATTTCCTA	-31	True	NA	3	True	AATAAA	-23	NA	9071401	9110255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_9071846_9083349_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
m54284U_201201-1_044215/164956812/ccs	chr2	+	1708	5	NIC	ENSMUSG00000027357.17	novel	1924	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	304.988012059491	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	1622	False	NA	13	True	AATAAA	-28	NA	132688585	132708705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_132689046_132691785_132691924_132704254_132704324_132706009_132706102_132707756
m54284U_201201-1_044215/16581947/ccs	chr1	+	7389	51	NIC	ENSMUSG00000006005.19	novel	7480	51	NA	NA	52	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_47	103.286506379101	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTTTTCTTCATTTCA	NA	False	NA	25	True	AATAAA	-24	NA	150269052	150325686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321874_150321993_150323262_150323382_150324893_150324990_150325482
m54284U_201201-1_044215/168427729/ccs	chr5	+	3685	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	217.435558780578	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4968	False	NA	19	True	AATAAA	-30	NA	105848731	105963076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_105848952_105880095_105880241_105959589_105960029_105960195
m54284U_201201-1_044215/170920696/ccs	chr2	+	3333	6	NIC	ENSMUSG00000027498.15	novel	3451	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	102.721760109531	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGACGTAAAGGTAGTTT	NA	False	NA	13	True	AATAAA	-20	NA	172212600	172224368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_172212777_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
m54284U_201201-1_044215/171442822/ccs	chr1	-	3344	10	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	484	junction_1	32.9256551253289	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAGTAAATATAGCCG	NA	False	NA	NA	False	AATAAA	-14	NA	36749028	36737194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
m54284U_201201-1_044215/176752329/ccs	chr10	+	3048	5	NNC	ENSMUSG00000023068.17	novel	4605	5	NA	NA	0	-981	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	165.410663199202	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGTAGTAGTATGTGA	NA	False	NA	5	True	AATAAA	-18	NA	52293642	52315298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_52293689_52305288_52305415_52306162_52306313_52309440_52309541_52312672
m54284U_201201-1_044215/180029529/ccs	chr7	-	1548	12	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	461	junction_2	565.94251087883	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTAACTCTAGAAAGCT	NA	False	NA	-8	True	AATAAA	-27	NA	89629767	89603867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_89604272_89604738_89604813_89605551_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
m54284U_201201-1_044215/18024292/ccs	chr2	-	2954	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	185.119500841583	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965543	124929661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
m54284U_201201-1_044215/18351020/ccs	chr12	+	3399	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	363.982453789557	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713247	98754012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
m54284U_201201-1_044215/21496455/ccs	chr4	-	2680	12	NNC	ENSMUSG00000041135.16	novel	2804	12	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	29.5707583951801	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTATCTTCTGGTAA	52	False	NA	-8	True	AATAAA	-19	NA	16163566	16122740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16157571_16157649_16158276_16158431_16163223
m54284U_201201-1_044215/22481395/ccs	chr19	+	1111	11	NIC	ENSMUSG00000024800.9	novel	1145	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	297.230701644362	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTTTAAATTTTACTA	NA	False	NA	NA	False	AATAAA	-26	NA	36061115	36082177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077640_36078208_36078239_36078633_36078672_36079220_36079301_36081735
m54284U_201201-1_044215/28968603/ccs	chr13	-	3481	6	ISM	ENSMUSG00000094870.9	ENSMUST00000177916.8	3067	7	-1	78	0	-77	intron_retention	FALSE	canonical	3	148	junction_5	14.0199857346575	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252342	120226800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_120228563_120230241_120230373_120237302_120237986_120244307_120244453_120250395_120250498_120251684
m54284U_201201-1_044215/29165866/ccs	chr4	-	3885	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_16	359.875887384787	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201201-1_044215/32638650/ccs	chr2	+	2328	13	NIC	ENSMUSG00000027282.18	novel	2377	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	704.955687141634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGCTTAGCCTGCTGC	172	False	NA	7	True	NA	NA	NA	90677574	90696984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90677708_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
m54284U_201201-1_044215/33489396/ccs	chr10	-	2679	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	380	junction_3	53.1859943970215	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520877	88510633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88516340_88516437_88520827
m54284U_201201-1_044215/34341092/ccs	chr9	+	3590	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	215	0	intron_retention	FALSE	canonical	3	95	junction_1	91.3275141660497	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1517	False	NA	23	True	AATAAA	-23	NA	113760216	113806270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201201-1_044215/3803723/ccs	chr17	-	3755	9	NIC	ENSMUSG00000055660.10	novel	6640	9	NA	NA	0	1132	combination_of_known_junctions	FALSE	canonical	3	71	junction_6	15.2151240547029	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGCTCATTTCCCAAC	NA	False	NA	-33	True	NA	NA	NA	95057447	95033380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95056813
m54284U_201201-1_044215/41026640/ccs	chr17	-	1095	5	NNC	ENSMUSG00000096780.8	novel	1626	16	NA	NA	-10121	-15007	at_least_one_novel_splicesite	FALSE	canonical	3	324	junction_3	195.078670028273	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCGTGTTTCTTTTCCCC	2347	False	NA	NA	False	AATAAA	-15	NA	6744542	6723807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_6724528_6725999_6726088_6728054_6728111_6734317_6734422_6744415
m54284U_201201-1_044215/4195841/ccs	chr15	-	6419	39	NIC	ENSMUSG00000036606.18	novel	6497	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_38	84.6279007121609	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGACTGGGTTTCTCCT	9143	False	NA	-5	True	AATACA	-19	NA	89064991	89039751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89040381_89040458_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
m54284U_201201-1_044215/5047154/ccs	chr2	+	3015	10	NIC	ENSMUSG00000038696.15	novel	1630	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	57.8179347628996	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTATATTGCTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34296873	34514962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_34297267_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
m54284U_201201-1_044215/50659740/ccs	chrX	+	4064	27	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	548	junction_3	189.502244292029	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201201-1_044215/5177831/ccs	chrX	+	2773	5	Intergenic	novelGene_9737	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	16.3764312351623	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	215	False	NA	2	True	AATAAA	-16	NA	169098025	169105546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_169098429_169099929_169100868_169101639_169101789_169102375_169102617_169104504
m54284U_201201-1_044215/52497246/ccs	chr11	-	2182	3	Intergenic	novelGene_5765	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	12	junction_2	7	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCTATTGCATACCATCA	NA	False	NA	NA	False	NA	NA	NA	31937011	31930696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_31932543_31934463_31934750_31936961
m54284U_201201-1_044215/53281717/ccs	chr3	-	4094	29	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	197	junction_1	254.875579890443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3507	False	NA	99	True	AAAAAG	-18	NA	89959822	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201-1_044215/54200867/ccs	chr11	-	2383	16	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_8	1335.63462069535	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	False	NA	-13	True	AATAAA	-23	NA	5049096	5019688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
m54284U_201201-1_044215/61802834/ccs	chr1	+	3760	15	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	30.8108945746435	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTCCAGTGCTTTCTGT	4264	False	NA	11	True	AATAAA	-17	NA	91072824	91098517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_91072892_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
m54284U_201201-1_044215/67570055/ccs	chr3	-	4061	28	NIC	ENSMUSG00000042520.17	novel	3975	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	204	junction_23	239.415239833374	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTACCTTCAGCCTCTGC	3507	False	NA	99	True	AAAAAG	-18	NA	89959822	89907599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201201-1_044215/68092327/ccs	chr19	+	3629	11	NIC	ENSMUSG00000034820.5	novel	3500	10	NA	NA	0	82	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	93.086841175324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCATTGAATAGATTTG	NA	False	NA	18	True	AATAAA	-23	NA	10502629	10525099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509624_10509699_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
m54284U_201201-1_044215/68289405/ccs	chr11	-	3743	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	418	junction_14	996.986871241829	205	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTCTGCAGGTTTCTC	8136	False	NA	-54	True	AATAAA	-22	NA	50216500	50185293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
m54284U_201201-1_044215/72484486/ccs	chr2	-	4542	30	NIC	ENSMUSG00000027002.14	novel	4469	31	NA	NA	0	0	intron_retention	FALSE	canonical	3	653	junction_15	68.0023431085436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAATGATTTCTTTAAAA	NA	False	NA	-6	True	AATAAA	-19	NA	80411608	80330861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
m54284U_201201-1_044215/73991283/ccs	chrX	-	1535	6	NIC	ENSMUSG00000031370.13	novel	460	6	NA	NA	0	978	combination_of_known_junctions	FALSE	canonical	3	185	junction_5	227.558695724861	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCCTTGAAGATATTTT	NA	False	NA	-10	True	AATATA	-15	NA	162741657	162735608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
m54284U_201201-1_044215/78973565/ccs	chr5	+	3654	3	NIC	ENSMUSG00000092354.8	novel	619	3	NA	NA	-53	674	intron_retention	FALSE	canonical	3	132	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCTTGTCAAGTACCT	NA	False	NA	NA	False	AATAAA	-14	NA	101987967	101994950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_101988098_101989616_101989940_101991749
m54284U_201201-1_044215/86641439/ccs	chr4	+	5647	27	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	584	junction_9	231.427832630339	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	591	False	NA	17	True	ATTAAA	-27	NA	137321538	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201201-1_044215/8979839/ccs	chr10	+	4876	3	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	0	-269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	75	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	NA	False	NA	12	True	AATAAA	-20	NA	75868483	75878799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_75868568_75869448_75869509_75874067
m54284U_201201-1_044215/92340889/ccs	chr18	+	3813	15	NIC	ENSMUSG00000037236.17	novel	6262	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	315.986251638406	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695210	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35695313_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
m54284U_201201-1_044215/93389286/ccs	chr16	+	1052	4	NNC	ENSMUSG00000116947.2	novel	452	2	NA	NA	-574	1914	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	36.1693547388148	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTGGCTCCGCGTGATT	2290	False	NA	15	True	NA	NA	NA	93811725	93815009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_93811971_93812291_93812370_93812713_93813006_93814572
m54284U_201203_174622/100008271/ccs	chr3	+	4130	24	NNC	ENSMUSG00000025437.16	novel	923	5	NA	NA	-6458	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	108.096907443579	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152045656	152098970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_152046063_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
m54284U_201203_174622/100009695/ccs	chr12	+	2236	9	NIC	ENSMUSG00000060121.16	novel	1588	10	NA	NA	0	58	intron_retention	FALSE	canonical	1	279	junction_3	170.872028138019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTGAAATGTCTGTGA	NA	False	NA	6	True	AATATA	-17	NA	59060239	59074731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59068523_59071788_59071900_59073640_59073700_59074522
m54284U_201203_174622/100139931/ccs	chr2	+	3523	17	NIC	ENSMUSG00000027263.13	novel	4206	18	NA	NA	0	-634	combination_of_known_junctions	FALSE	canonical	3	61	junction_3	57.8950761615355	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCTTTGTTTGCTGTAC	NA	False	NA	19	True	AATAAA	-20	NA	121001689	121028616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_121001953_121004038_121004168_121005820_121005944_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
m54284U_201203_174622/100271047/ccs	chr3	+	2113	12	NIC	ENSMUSG00000050150.17	novel	2248	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	36.7153445976695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTATGTCTCATGATT	NA	False	NA	4	True	ATTAAA	-16	NA	135053789	135103585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_135053884_135054087_135054535_135060771_135060833_135063217_135063516_135077605_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135103356
m54284U_201203_174622/100272113/ccs	chr16	-	3051	11	NNC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	360.384364255721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6230	False	NA	-4	True	NA	NA	NA	38370620	38345501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38354993_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
m54284U_201203_174622/100272168/ccs	chrX	+	5300	17	NIC	ENSMUSG00000025246.14	novel	5234	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	145.192921228964	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACATAGTGACTGTGTT	NA	False	NA	12	True	AATAAA	-20	NA	76554618	76706589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_76554876_76628399_76628466_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
m54284U_201203_174622/100272337/ccs	chr4	+	5235	25	NIC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	0	0	intron_retention	FALSE	canonical	1	13	junction_1	25.1900760331436	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126450787	126487696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126450919_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444
m54284U_201203_174622/100272710/ccs	chr8	+	2627	6	ISM	ENSMUSG00000046295.14	ENSMUST00000125290.8	2410	7	-6	-36	0	0	intron_retention	FALSE	canonical	3	99	junction_2	7.57891812859857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTTTGTCTCCATGTC	NA	False	NA	18	True	NA	NA	NA	71858653	71862548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_71858742_71858830_71858984_71859322_71860394_71860514_71860687_71861308_71861469_71861565
m54284U_201203_174622/10027590/ccs	chr8	+	3885	11	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	24.8185414559357	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720306	75758606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75726626_75726742_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
m54284U_201203_174622/10027871/ccs	chr1	+	3935	5	NIC	ENSMUSG00000040918.13	novel	3571	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	256	junction_3	15.9216833280907	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCTTTTCACTCAGAA	NA	False	NA	13	True	AATAAA	-15	NA	164076614	164092938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164090331_164090958
m54284U_201203_174622/10029177/ccs	chr7	+	3156	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3307	junction_7	400.843472936654	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201203_174622/100336366/ccs	chr6	+	3293	8	NIC	ENSMUSG00000036371.7	novel	1667	8	NA	NA	0	1662	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	2429.87894214288	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTCTTGGTTTCCCTT	5866	False	NA	12	True	GATAAA	-25	NA	67243988	67262957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_67244394_67248181_67248314_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
m54284U_201203_174622/100336667/ccs	chr1	-	6681	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_15	283.558543338056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7764	False	NA	17	True	NA	NA	NA	84817155	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722724_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
m54284U_201203_174622/100336839/ccs	chr10	+	2825	13	NIC	ENSMUSG00000006498.17	novel	3110	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_9	472.699252520388	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTCCCTGAGCCCTT	1561	False	NA	31	True	ATTAAA	-15	NA	79690438	79700193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79698282_79698376_79698486_79698704_79698811_79698890_79698978
m54284U_201203_174622/100338172/ccs	chr17	-	3652	22	NIC	ENSMUSG00000001229.10	novel	3374	21	NA	NA	0	133	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	37.462241005228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCCGCAGTGAGGCTC	NA	False	NA	NA	False	ATTAAA	-16	NA	56525905	56493673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56494462_56495267_56495380_56496322_56496466_56496761_56496881_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
m54284U_201203_174622/100401455/ccschrUn	chrUn_MU069435v1	+	171	1	Intergenic	novelGene_9745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	5856	6027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_MU069435v1_+_5900_6000
m54284U_201203_174622/100401918/ccs	chr2	+	5673	23	NIC	ENSMUSG00000039844.21	novel	6402	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	94	junction_2	58.96679272801	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29509781	29630375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
m54284U_201203_174622/100532853/ccs	chr17	+	3680	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	154.706302168191	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8820	False	NA	32	True	AATAAA	-33	NA	35354485	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201203_174622/100599181/ccs	chr12	+	2054	14	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	286.853445871379	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGTTTATTGAATG	NA	False	NA	23	True	AATAAA	-29	NA	105976541	106041668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_105976969_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
m54284U_201203_174622/100600557/ccs	chr10	+	5279	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_4	43.4335379887734	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885
m54284U_201203_174622/100665055/ccs	chr4	-	3400	16	NIC	ENSMUSG00000038578.16	novel	3295	17	NA	NA	262	481	combination_of_known_splicesites	FALSE	canonical	3	11	junction_15	21.7220829776725	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAGCTCAACTCCAAGG	14	True	NA	NA	False	NA	NA	NA	59438371	59314201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59438205
m54284U_201203_174622/100731173/ccs	chr15	+	186	1	Intergenic	novelGene_7920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAACTGAAAAGAAAGGCT	9794	False	NA	NA	False	NA	NA	NA	96352366	96352552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_96352400_96352600
m54284U_201203_174622/100861054/ccs	chr10	-	2361	8	NNC	ENSMUSG00000020248.19	novel	2554	8	NA	NA	0	-208	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	315.938446601259	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGCATGGTCTTCTGCAT	NA	False	NA	-37	True	NA	NA	NA	82599978	82584742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588454_82590798_82590930_82592535_82592630_82597666_82597748_82599837
m54284U_201203_174622/100862006/ccs	chr8	-	2773	15	NIC	ENSMUSG00000031575.19	novel	2337	16	NA	NA	0	-336	intron_retention	FALSE	canonical	3	3119	junction_11	188.979752721755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCTGCAGTACACT	NA	False	NA	-6	True	TATAAA	-17	NA	26337722	26307349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_26307537_26307631_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26337606
m54284U_201203_174622/100862579/ccs	chr1	-	2917	16	NIC	ENSMUSG00000004364.15	novel	4709	16	NA	NA	-236	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_14	151.899440420299	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCCAGGTCTTCAGTG	NA	False	NA	-27	True	AATAAA	-14	NA	80318433	80244539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300703_80300774_80317962
m54284U_201203_174622/100925548/ccs	chr17	+	4145	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	424.580325505225	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9538	False	NA	10	True	AATAAA	-11	NA	35220026	35235298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
m54284U_201203_174622/10093333/ccs	chr7	+	7229	25	NIC	ENSMUSG00000066306.14	novel	2862	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	69.0609131290792	134	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTAAGCTCTTTGG	2093	False	NA	28	True	AATAAA	-16	NA	101583317	101664162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101583525_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
m54284U_201203_174622/10094581/ccs	chr4	+	893	4	NIC	ENSMUSG00000065990.13	novel	773	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	1112.8534894086	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTAGGCCGACCTAGA	NA	False	NA	27	True	AATAAA	-17	NA	155916125	155917518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155916224_155916349_155916528_155916808_155917255_155917347
m54284U_201203_174622/10094594/ccs	chr13	-	2706	15	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_11	1843.1191411212	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	4751	False	NA	-23	True	AATAAA	-15	NA	58550330	58539052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
m54284U_201203_174622/10094939/ccs	chr12	-	2119	11	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	0	939	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	87.9545337091841	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGTTGACCCTTGCAA	NA	False	NA	NA	False	AATAAA	-17	NA	101924505	101888400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914305_101914533_101914699_101924392
m54284U_201203_174622/100992175/ccs	chr5	-	497	1	FSM	ENSMUSG00000067719.6	ENSMUST00000088299.6	309	1	-43	-145	-43	145	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGACAAATA	NA	False	NA	NA	False	NA	NA	NA	24786903	24786406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_24786400_24786900
m54284U_201203_174622/100992310/ccs	chrX	-	10269	34	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_29	50.9618233388144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGCTCTTTATTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	104972976	104841220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
m54284U_201203_174622/101058927/ccs	chr11	-	3396	7	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_6	1714.0389678573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69561574_69561753_69561803_69563104
m54284U_201203_174622/101059132/ccs	chr15	-	175	1	Intergenic	novelGene_7721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAACTATGATATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	56589969	56589794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_56589800_56590000
m54284U_201203_174622/101059248/ccs	chr2	+	1927	4	NIC	ENSMUSG00000074736.11	novel	620	2	NA	NA	90	-51	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	14.7044966667418	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCTTACGACTTTT	NA	False	NA	NA	False	NA	NA	NA	149672931	149846261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_149672998_149741337_149741896_149772824_149772963_149845096
m54284U_201203_174622/101122920/ccs	chr14	-	3587	12	NIC	ENSMUSG00000041471.10	novel	3317	11	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	25.9930060523281	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGAAGCTTTTATTAT	NA	False	NA	-14	True	AATATA	-33	NA	34032503	33958989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_33995443_33995534_34030996_34031052_34032123
m54284U_201203_174622/101124560/ccs	chr11	-	1939	9	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_8	1546.8323226436	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
m54284U_201203_174622/101124844/ccs	chr3	+	2769	20	NNC	ENSMUSG00000068747.15	novel	6796	20	NA	NA	0	-3951	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	9.56679390947517	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTTTGTAAGACT	4989	False	NA	17	True	TTTAAA	-23	NA	108191406	108264803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108263546_108263654_108263892_108264005_108264544
m54284U_201203_174622/101189009/ccs	chr19	+	188	1	Intergenic	novelGene_9291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAGCTGAGGATG	NA	False	NA	NA	False	NA	NA	NA	45261940	45262128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45261900_45262100
m54284U_201203_174622/101385712/ccs	chr11	-	2739	12	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_5	115.688024480775	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508762	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120503428_120503671_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201203_174622/101385734/ccs	chr13	+	1529	4	NNC	ENSMUSG00000113081.2	novel	452	3	NA	NA	0	274	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	193.294823750893	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGATGGCCCGTTGT	NA	False	NA	10	True	AATAAA	-12	NA	62411379	62423341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_62411510_62420579_62420707_62420906_62420968_62422130
m54284U_201203_174622/101386666/ccs	chr2	-	1088	9	ISM	ENSMUSG00000026928.15	ENSMUST00000100303.10	1947	12	2124	11	2124	0	3prime_fragment	FALSE	canonical	3	13	junction_2	6.02987354759617	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTGGTTGGATATGCA	NA	False	NA	NA	False	AATAAA	-17	NA	26247635	26242198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_26242424_26242496_26242574_26242952_26243027_26244368_26244418_26244841_26244884_26245344_26245537_26246769_26246896_26247196_26247341_26247476
m54284U_201203_174622/101386952/ccs	chr12	+	2591	12	NNC	ENSMUSG00000033373.17	novel	2613	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_11	88.0648709055052	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76884206	76968186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966852
m54284U_201203_174622/101450750/ccs	chr5	-	4510	28	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_10	72.7152403065513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCTGGCTTGTAAAGCAC	NA	False	NA	-28	True	ATTAAA	-23	NA	108777621	108717279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108738969_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
m54284U_201203_174622/101452092/ccs	chr1	-	1609	14	NIC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	0	-1275	combination_of_known_junctions	FALSE	canonical	3	21	junction_13	254.854593651606	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137284	60117301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137148
m54284U_201203_174622/101583342/ccs	chr19	-	1556	7	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_5	103.870779764517	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9773	False	NA	NA	False	AGTAAA	-14	NA	60215129	60187330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60209485_60209737_60214741
m54284U_201203_174622/101583472/ccs	chr2	-	189	1	Intergenic	novelGene_1049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATAATCCAGAGTTGTCT	NA	False	NA	NA	False	NA	NA	NA	126537162	126536973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_126537000_126537200
m54284U_201203_174622/10158545/ccs	chr10	+	4416	5	ISM	ENSMUSG00000058297.17	ENSMUST00000121820.9	5238	11	19919	0	19670	0	3prime_fragment	FALSE	canonical	2	6	junction_4	1.92028643696715	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAGAAACCTTTGCT	NA	False	NA	4	True	AATAAA	-17	NA	59961959	59971020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
m54284U_201203_174622/10158646/ccs	chr13	-	178	1	Intergenic	novelGene_7167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAGAACTT	NA	False	NA	NA	False	NA	NA	NA	64476447	64476269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64476300_64476400
m54284U_201203_174622/10159459/ccs	chr6	-	1732	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_9	124.029068675626	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354478	113343615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354450
m54284U_201203_174622/10159766/ccs	chr2	+	4917	7	ISM	ENSMUSG00000027281.17	ENSMUST00000135260.8	4906	8	611	0	51	0	3prime_fragment	FALSE	canonical	2	8	junction_3	6.76798016808232	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTTGTTGTGCAATTT	NA	False	NA	15	True	AATAAA	-23	NA	136734138	136913870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_136734282_136747462_136747521_136842103_136842194_136885919_136885998_136888636_136888726_136908049_136908151_136909512
m54284U_201203_174622/10160751/ccs	chr9	+	3237	26	NIC	ENSMUSG00000032295.16	novel	3820	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	55.6285682001613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGCTGTTTCTCA	NA	False	NA	23	True	AATAAA	-24	NA	57038051	57049497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_57038174_57038442_57038570_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
m54284U_201203_174622/101647303/ccs	chr17	+	3317	7	NIC	ENSMUSG00000025737.6	novel	3099	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_4	15.7020876177518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTGTCACTTTCATTG	NA	False	NA	18	True	AATAAA	-20	NA	26042622	26047704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26043661_26044627_26045599_26046008_26046128_26046208_26046331_26046401_26046968_26047127_26047313_26047388
m54284U_201203_174622/101647927/ccs	chr11	-	7494	32	NNC	ENSMUSG00000020422.15	novel	7629	31	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	1	17	junction_1	14.7032385454799	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	9605	False	NA	NA	False	AATAAA	-24	NA	8614591	8381651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
m54284U_201203_174622/101712142/ccs	chr4	-	4714	36	NIC	ENSMUSG00000028431.12	novel	6160	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	63.153586677275	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTGACTCAGTGGTAA	NA	False	NA	-18	True	AATAAA	-18	NA	56802331	56751011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
m54284U_201203_174622/101713589/ccs	chr3	-	3790	27	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-243	combination_of_known_junctions	FALSE	canonical	3	158	junction_19	269.861470050379	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3507	False	NA	-2	True	AATATA	-16	NA	89959822	89907842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201203_174622/101777497/ccs	chr17	+	3548	17	NIC	ENSMUSG00000041354.17	novel	3252	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_2	22.9910818307882	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCCCCATCCTTCAGT	3195	False	NA	12	True	AATAAA	-18	NA	34148516	34156661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
m54284U_201203_174622/101777676/ccs	chr12	-	3952	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	0	1007	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	39.7020150622106	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGAAAGTTTTTTC	NA	False	NA	NA	False	NA	NA	NA	99359331	99160345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_99163073_99175719_99175826_99185859_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
m54284U_201203_174622/101843203/ccs	chr9	-	5790	18	NIC	ENSMUSG00000032030.17	novel	3585	19	NA	NA	0	-71	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	97.9621422534179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATCTATCCAGAAAATC	NA	False	NA	-14	True	AATAAA	-17	NA	53578807	53525952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_53529311_53532459_53532584_53533157_53533277_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
m54284U_201203_174622/101909725/ccs	chr11	+	2455	9	NNC	ENSMUSG00000020691.14	novel	1867	9	NA	NA	0	757	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	81.7370020247868	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGTGTGGCTTAATTT	NA	False	NA	9	True	AATAAA	-19	NA	105017304	105031977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_105017433_105017601_105017694_105019681_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
m54284U_201203_174622/102106242/ccs	chr8	-	1803	15	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	981	junction_3	172.790615887482	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050771_71050855_71050885_71051188_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
m54284U_201203_174622/102107307/ccs	chr10	+	7219	8	NIC	ENSMUSG00000039835.17	novel	4854	7	NA	NA	-314	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	8.8456146173787	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTGTATGTGCATTTA	NA	False	NA	22	True	AATAAA	-26	NA	18194418	18409640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_18195025_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
m54284U_201203_174622/102107857/ccs	chr11	+	3766	22	NIC	ENSMUSG00000020898.19	novel	4164	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	98.8413373914187	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5272	False	NA	21	True	AATAAA	-21	NA	68906922	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
m54284U_201203_174622/102171761/ccs	chr3	+	2038	8	NIC	ENSMUSG00000078578.10	novel	2504	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_1	932.389841389604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTGTTTGACAAGT	NA	False	NA	11	True	AATAAA	-12	NA	135144293	135172434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
m54284U_201203_174622/102172016/ccs	chr8	+	3006	7	NIC	ENSMUSG00000031467.11	novel	10779	8	NA	NA	256	-1451	intron_retention	FALSE	canonical	3	636	junction_4	36.4783040541452	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCTGCAGTCACAGTCT	NA	False	NA	14	True	ATTAAA	-14	NA	18896550	18931986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18928185_18929620_18929745_18931753
m54284U_201203_174622/102173103/ccs	chr7	-	4918	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	289.810558813857	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454854	118441444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_118442787_118442883_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
m54284U_201203_174622/102237572/ccs	chr9	+	6010	5	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_1	105.264844558855	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	395	False	NA	NA	False	TTTAAA	-7	NA	37400614	37435446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_37401130_37402751_37402866_37424909_37428769_37430022_37430084_37433985
m54284U_201203_174622/10224200/ccs	chr4	-	1036	7	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-273	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	583.385450052822	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGACTATTTTGAC	NA	False	NA	-33	True	TATAAA	-18	NA	155170828	155158839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155159201_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
m54284U_201203_174622/10224867/ccs	chr2	+	4357	21	NIC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_1	54.6244221937404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_127267142_127269160_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201203_174622/102301978/ccs	chr14	-	3266	1	Antisense	novelGene_ENSMUSG00000021843.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCATTTTTGAATAAGAG	NA	False	NA	NA	False	NA	NA	NA	47962747	47959481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_-_47959500_47962700
m54284U_201203_174622/102303881/ccs	chr15	-	3843	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_21	32.0725194338633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016165	84948889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011959_85012073_85013871_85014061_85016029
m54284U_201203_174622/102368112/ccs	chr14	+	5809	16	NIC	ENSMUSG00000022000.12	novel	6151	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	37.5933800318915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	False	NA	14	True	AATAAA	-15	NA	75521812	75581866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_75522106_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
m54284U_201203_174622/102370037/ccs	chr19	-	2205	12	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_10	159.842122521666	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5972	False	NA	0	True	AATAAA	-15	NA	4251661	4245194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251148_4251247_4251327_4251399_4251481
m54284U_201203_174622/102433612/ccs	chr2	+	3116	18	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_16	190.586020321189	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	634	False	NA	36	True	AATAAA	-37	NA	31462803	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505699_31506190
m54284U_201203_174622/102433696/ccs	chr5	-	175	1	Intergenic	novelGene_2974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATAAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	135232244	135232069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135232100_135232200
m54284U_201203_174622/102434139/ccs	chr5	+	4094	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	245.758666813705	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211022_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/102500331/ccs	chr5	+	2290	15	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_12	80.9591733845031	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111015873_111015960_111019892_111019974_111021345
m54284U_201203_174622/102694928/ccs	chr1	-	6573	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_39	274.906705282285	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7695	False	NA	17	True	NA	NA	NA	84817224	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771491_84772049_84792543_84792691_84816949
m54284U_201203_174622/102761022/ccs	chr13	+	4347	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	0	186	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	187.869635651959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTTGAAGATGGTGAA	8905	False	NA	4	True	AATAAA	-12	NA	44883270	45073770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_44883412_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
m54284U_201203_174622/102761571/ccs	chr6	-	6465	16	NIC	ENSMUSG00000051586.18	novel	6670	16	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_15	8.89194391945128	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAATGAAAAATGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	120980010	120908682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120979958
m54284U_201203_174622/102827232/ccs	chr13	+	1673	10	NNC	ENSMUSG00000000253.14	novel	1580	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	25.8370965001015	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGCTGGAGTTTGCGT	NA	False	NA	22	True	AATATA	-16	NA	45660919	45699858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45674602_45674696_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
m54284U_201203_174622/102893482/ccs	chr8	+	5086	30	NIC	ENSMUSG00000031441.16	novel	7549	30	NA	NA	0	769	combination_of_known_junctions	FALSE	canonical	3	18	junction_29	16.6168259924755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTGTGCTTGAACTGG	NA	False	NA	NA	False	NA	NA	NA	12807068	12916339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12911639_12911725_12914919
m54284U_201203_174622/102893871/ccs	chr10	+	4422	29	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	77.9232599342167	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6606	False	NA	11	True	AATAAA	-41	NA	128067948	128088801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
m54284U_201203_174622/102894251/ccs	chr4	+	1552	9	NIC	ENSMUSG00000036073.19	novel	1595	11	NA	NA	-237	0	intron_retention	FALSE	canonical	2	43	junction_2	92.4836978877899	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGAGGAGTAGTGTGGA	0	True	NA	32	True	AATAAA	-33	NA	41755520	41758695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_41755653_41755960_41756131_41756343_41756423_41756512_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
m54284U_201203_174622/10291087/ccs	chr16	-	5380	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_4	32.0850042854914	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	False	NA	1	True	AATAAA	-28	NA	10994206	10954455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
m54284U_201203_174622/102957313/ccs	chr17	+	2093	17	NIC	ENSMUSG00000055817.19	novel	2087	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	426.249175219143	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGTTTATTTTGTTT	NA	False	NA	NA	False	AATAAA	-18	NA	84013619	84122334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
m54284U_201203_174622/102958648/ccs	chr3	-	185	1	Intergenic	novelGene_1487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAACTGTCACAGTGCA	9412	False	NA	NA	False	NA	NA	NA	88489191	88489006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88489000_88489200
m54284U_201203_174622/103022924/ccs	chr3	-	232	1	Intergenic	novelGene_1537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAGGGGCTGGAGAGAT	2910	False	NA	NA	False	NA	NA	NA	90084552	90084320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90084300_90084600
m54284U_201203_174622/103023834/ccs	chr1	-	4463	28	NNC	ENSMUSG00000026458.14	novel	5238	28	NA	NA	-11796	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_26	16.5805180934407	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCTGCTTGGACTA	NA	False	NA	-6	True	AATAAA	-13	NA	134272462	134226118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
m54284U_201203_174622/103025025/ccs	chr18	+	5023	17	NIC	ENSMUSG00000037815.8	novel	3733	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	1584	junction_14	164.191770500229	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCAGAAGTCGTTCTT	NA	False	NA	33	True	AATAAA	-21	NA	35251965	35387832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35385804_35386657
m54284U_201203_174622/103088263/ccs	chr16	+	175	1	Intergenic	novelGene_8215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTTTTTTTTTTAAA	9308	False	NA	NA	False	NA	NA	NA	32256560	32256735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_32256600_32256700
m54284U_201203_174622/103089141/ccs	chr2	+	12015	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24379	0	intron_retention	FALSE	canonical	3	35	junction_13	53.7028159276897	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTGGGAGGTTTGT	8273	False	NA	14	True	AATAAA	-25	NA	119703329	119798230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
m54284U_201203_174622/103089483/ccs	chr5	+	4812	24	NIC	ENSMUSG00000029502.15	novel	4805	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	28.0402761906312	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTTACTTTTTATC	NA	False	NA	80	True	AAGAAA	-11	NA	110324744	110371067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110324916_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
m54284U_201203_174622/103090187/ccs	chr11	-	4414	8	NIC	ENSMUSG00000041961.15	novel	6311	9	NA	NA	0	-665	intron_retention	FALSE	canonical	3	35	junction_3	4.75093975666168	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATACTGTTGTCTCCCTG	6432	False	NA	NA	False	ATTAAA	-17	NA	5394847	5229266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
m54284U_201203_174622/103155443/ccs	chr12	+	5670	28	NIC	ENSMUSG00000052632.17	novel	5678	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_23	19.3616934039294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTTCATCTGTAAAGTA	NA	False	NA	20	True	AATAAA	-16	NA	21161756	21320172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263139_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21306475_21306611_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
m54284U_201203_174622/103156422/ccs	chrX	-	2203	22	NIC	ENSMUSG00000031410.15	novel	2233	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	1.0190921218587	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGGATTCTTCTTTGC	NA	False	NA	NA	False	AATAAA	-18	NA	134499526	134480303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_134480575_134480703_134480765_134483832_134484016_134484471_134484539_134485101_134485145_134485235_134485352_134485452_134485512_134485645_134485754_134485889_134485946_134486029_134486099_134486514_134486552_134487985_134488096_134488266_134488375_134488481_134488571_134488715_134488786_134488930_134489012_134489121_134489227_134489324_134489409_134489679_134489831_134490065_134490220_134494561_134494643_134499426
m54284U_201203_174622/103220697/ccs	chr8	+	5143	29	NIC	ENSMUSG00000031442.22	novel	3215	28	NA	NA	-118	0	intron_retention	FALSE	canonical	2	7	junction_1	7.04604028327041	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTCTGGTTATGTGTTA	NA	False	NA	19	True	AATAAA	-26	NA	12976513	13070509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_12976734_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
m54284U_201203_174622/103286567/ccs	chr5	-	180	1	Intergenic	novelGene_2574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGTCACTTGATG	NA	False	NA	NA	False	NA	NA	NA	52751540	52751360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_52751400_52751500
m54284U_201203_174622/103287264/ccs	chr3	+	3206	10	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	103.881461410068	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGACTGCTTCCTCCC	NA	False	NA	16	True	AATAAA	-16	NA	66893017	67265729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_66893140_66901849_66902046_66903803_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
m54284U_201203_174622/103351481/ccs	chr5	-	197	1	Intergenic	novelGene_3004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAGGGAAAGGATTTG	NA	False	NA	NA	False	NA	NA	NA	137769823	137769626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_137769600_137769800
m54284U_201203_174622/103351839/ccs	chr16	+	3986	3	NIC	ENSMUSG00000022686.15	novel	4258	4	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	1	7	junction_2	33	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAGTAATGTGAATTTAA	NA	False	NA	7	True	AATAAA	-15	NA	19579148	19591213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_19579228_19579390_19579578_19587493
m54284U_201203_174622/103418251/ccs	chr1	-	1243	9	NIC	ENSMUSG00000016481.16	novel	1501	9	NA	NA	0	-54	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	78.6018447620665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTCTTGGTCATGGTG	NA	False	NA	-1	True	NA	NA	NA	194813869	194781020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813809
m54284U_201203_174622/103482246/ccs	chr15	+	6655	31	NIC	ENSMUSG00000058290.5	novel	6658	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	69.6461213724226	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTGAGAGTTGAAGCTA	391	False	NA	17	True	AATAAA	-17	NA	102204732	102232792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102204851_102205165_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
m54284U_201203_174622/10355256/ccs	chr11	-	3562	10	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_4	172.244084633865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201203_174622/10357432/ccs	chr19	-	3041	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	0	-146	combination_of_known_splicesites	FALSE	canonical	2	22	junction_23	173.343774829706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAATATTTTTAAAATCTC	NA	False	NA	-12	True	AATAAA	-21	NA	37340010	37247974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37339912
m54284U_201203_174622/103613270/ccs	chr11	+	1979	8	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	525	junction_7	8.51649060616507	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540844_70540951_70541046_70541589_70541671_70541747
m54284U_201203_174622/103613886/ccs	chr7	-	192	1	Intergenic	novelGene_4037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	838	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAGCTTTAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	115685475	115685283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_115685300_115685500
m54284U_201203_174622/103678178/ccs	chr11	+	883	2	NNC	ENSMUSG00000086591.2	novel	859	2	NA	NA	3831	0	intron_retention	FALSE	canonical	3	26	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTGAAAGGAAAACGATGT	2404	False	NA	NA	False	AATAAA	-18	NA	69343204	69344502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_69343301_69343715
m54284U_201203_174622/103678542/ccs	chr11	-	3160	15	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	554.505079014666	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615196
m54284U_201203_174622/103679459/ccs	chr5	+	1352	12	NNC	ENSMUSG00000028932.9	novel	1785	13	NA	NA	1466	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_10	474.994371432507	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCTTCCAGATCTCTG	NA	False	NA	21	True	AATAAA	-17	NA	21991746	22008785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008172_22008363_22008461_22008544
m54284U_201203_174622/103679990/ccs	chr5	-	2057	7	NIC	ENSMUSG00000004642.14	novel	1906	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1123	junction_4	42.0254552490379	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCCTATACTGTTTGG	NA	False	NA	-4	True	AATAAA	-22	NA	33809697	33797398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33803414_33807086_33807192_33809306_33809424_33809538
m54284U_201203_174622/103743518/ccs	chr2	-	3132	17	ISM	ENSMUSG00000026959.14	ENSMUST00000114317.10	3809	20	7588	0	-6110	0	3prime_fragment	FALSE	canonical	3	13	junction_1	5.11699069278028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCGGGTTTTGTCTATTG	9882	False	NA	-4	True	NA	NA	NA	25201519	25181192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_25182141_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25201354
m54284U_201203_174622/103745941/ccs	chr3	+	5669	8	NIC	ENSMUSG00000028180.19	novel	2737	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	697	junction_7	81.7267722727531	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCTCTGACTGAATGTT	NA	False	NA	3	True	AATAAA	-11	NA	157240024	157254013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157250760_157252311
m54284U_201203_174622/103746101/ccs	chr7	-	2472	17	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	112	junction_11	36.9805164072921	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364419	30353135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
m54284U_201203_174622/103809047/ccs	chr11	+	175	1	Intergenic	novelGene_5761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGTTACCCAAGAATA	NA	False	NA	-1	True	NA	NA	NA	30432658	30432833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_30432700_30432800
m54284U_201203_174622/103875811/ccs	chr4	+	4284	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_1	14.6574213284602	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCGCTTCTGGAACGC	NA	False	NA	38	True	TATAAA	-27	NA	152171314	152199857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
m54284U_201203_174622/103876931/ccs	chr16	-	3398	17	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_14	406.843028697801	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866093_4866218_4866613_4866651_4867669
m54284U_201203_174622/103942697/ccs	chr17	+	206	1	Intergenic	novelGene_8787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACATGACTTCACCTCA	NA	False	NA	NA	False	NA	NA	NA	92969123	92969329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_92969100_92969300
m54284U_201203_174622/103942762/ccs	chr3	-	3683	9	NNC	ENSMUSG00000028018.16	novel	1975	10	NA	NA	0	-2788	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	62.8190606026547	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATTAGTGGTATTTTAG	NA	False	NA	NA	False	AATAAA	-19	NA	132797586	132707379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_132709263_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
m54284U_201203_174622/104138299/ccs	chrX	-	2061	16	NNC	ENSMUSG00000036932.15	novel	2237	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	293.647604375645	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTGTTTTATTTTAA	NA	False	NA	-1	True	ATTAAA	-16	NA	47602303	47563820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570880_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
m54284U_201203_174622/104203979/ccs	chr2	-	2272	14	NNC	ENSMUSG00000026970.17	novel	1806	15	NA	NA	0	-252	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_13	82.4830626328932	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGTAGGTGTTTTTAA	NA	False	NA	-5	True	AATAAA	-28	NA	60711814	60582548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672814_60711461
m54284U_201203_174622/10421480/ccs	chrX	+	3954	12	NIC	ENSMUSG00000063785.13	novel	2507	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	338	junction_6	49.5136678684293	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTACCTTCTGTATTA	NA	False	NA	20	True	AATAAA	-24	NA	47345773	47371330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
m54284U_201203_174622/10422230/ccs	chr5	+	5527	44	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	36.6391197307708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2013	False	NA	7	True	AATAAA	-8	NA	33021064	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021166_33021501_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
m54284U_201203_174622/104270397/ccs	chr2	+	3175	11	NIC	ENSMUSG00000027374.13	novel	4481	12	NA	NA	0	130	intron_retention	FALSE	canonical	3	1110	junction_4	153.534654068715	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGGTATATAGCTGT	4164	False	NA	26	True	AATAAA	-23	NA	127429338	127445905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
m54284U_201203_174622/104333476/ccs	chr8	+	2361	17	NIC	ENSMUSG00000001909.17	novel	2114	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	133.003230693844	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85412947	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85413329_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201203_174622/104336034/ccs	chr11	+	5251	16	NNC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	43.6513459128124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93776677	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_93776889_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
m54284U_201203_174622/104336084/ccs	chr6	-	2895	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_14	84.3388930973658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCCCTGCTTAAGCTT	NA	False	NA	-11	True	AATAAA	-22	NA	39354609	39312922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349780_39349862_39354552
m54284U_201203_174622/104398963/ccs	chr11	+	3300	4	NNC	ENSMUSG00000020453.18	novel	3118	4	NA	NA	-185	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_3	178.430814478765	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGCTCCCCCGAG	6267	False	NA	14	True	ATTAAA	-16	NA	3240253	3259083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_3241885_3243279_3243344_3249033_3249206_3257650
m54284U_201203_174622/104400372/ccs	chr14	-	2579	6	NIC	ENSMUSG00000034194.19	novel	1726	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	82.6510737982272	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTGCGTCCAAGTG	NA	False	NA	-6	True	AATAAA	-15	NA	69945033	69934755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944954
m54284U_201203_174622/104401650/ccs	chr8	+	2280	9	NIC	ENSMUSG00000003573.16	novel	2445	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_2	60.6206183983634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTGAGATCTGGCTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	70735648	70747003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70735751_70737883_70737966_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
m54284U_201203_174622/104466606/ccs	chr2	+	2869	7	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1993	junction_1	228.159057579478	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130120211_130120816
m54284U_201203_174622/104662118/ccs	chr7	+	3462	6	NIC	ENSMUSG00000062542.12	novel	3817	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	62.0064512772663	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTCGTTGTCTCATTA	NA	False	NA	NA	False	AGTAAA	-16	NA	106969996	107147860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_106970355_107035481_107036029_107101299_107101421_107103368_107103541_107105695_107105826_107145726
m54284U_201203_174622/104662644/ccs	chr5	+	1842	10	NNC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	50397	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	5.55999822364302	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCTGTGTCATCTCACT	4829	False	NA	NA	False	AATATA	-42	NA	103727828	103746169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_103727978_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
m54284U_201203_174622/104726643/ccs	chr4	-	4242	22	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	0	-2205	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	110.676665395369	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTCGCTCTTACTTG	4	True	NA	1	True	AATAAA	-22	NA	9669086	9451283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9635900_9635970_9639197_9639348_9668780
m54284U_201203_174622/104726742/ccs	chr6	+	4724	14	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	44.7021702344376	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	287	False	NA	28	True	AATAAA	-16	NA	113284152	113301821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
m54284U_201203_174622/104792971/ccs	chr5	-	2520	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	855	junction_7	349.508760023742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959402	122925793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_122926082_122926364_122926528_122929670_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
m54284U_201203_174622/104793519/ccs	chr19	-	181	1	Intergenic	novelGene_9143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTTTGGTTTTGGT	8830	False	NA	-4	True	NA	NA	NA	7333025	7332844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7332800_7333000
m54284U_201203_174622/104794480/ccs	chr15	-	5214	5	NIC	ENSMUSG00000041935.11	novel	5076	6	NA	NA	0	-355	intron_retention	FALSE	canonical	3	219	junction_2	23.7907545067406	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTTCCAGTTATCT	2180	False	NA	-1	True	ATTAAA	-17	NA	4025226	4011871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021947_4025096
m54284U_201203_174622/104857843/ccs	chr2	+	177	1	Intergenic	novelGene_592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCTGAGGAT	NA	False	NA	NA	False	NA	NA	NA	10310343	10310520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_10310300_10310500
m54284U_201203_174622/104858758/ccs	chr5	-	1687	10	NIC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	470	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	557.080972459609	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGTGCTGGGCTGTCTAC	NA	False	NA	-18	True	AATAAA	-18	NA	117527112	117517211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117526981
m54284U_201203_174622/104924286/ccs	chr12	+	1560	11	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_10	14.2298981022353	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGGGTCTCCAAAGAGTAA	8713	False	NA	7	True	AATAAA	-40	NA	79344124	79861152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860683
m54284U_201203_174622/104990675/ccs	chr11	-	1976	14	NIC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	0	304	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	177.836138924832	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGGTTTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-27	NA	95873437	95853957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95873327
m54284U_201203_174622/104990971/ccs	chr7	+	2003	7	NIC	ENSMUSG00000046591.11	novel	3655	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	91.3699744020005	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGGAAACTAAAGGCAAA	1950	False	NA	NA	False	AATAAA	-17	NA	79309969	79325461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79325257
m54284U_201203_174622/1050069/ccs	chr10	-	6670	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	126	355	combination_of_known_junctions	FALSE	canonical	3	87	junction_3	53.2569765904483	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAAGGAACATCTTGGTT	NA	False	NA	-3	True	AATAAA	-20	NA	62728639	62648045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62728473
m54284U_201203_174622/105120811/ccs	chr5	-	2846	18	NIC	ENSMUSG00000029469.15	novel	2950	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	14.5402436403627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTCTTTTTACTTCATT	1243	False	NA	NA	False	ATTAAA	-20	NA	122752581	122688266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122749005_122749171_122752500
m54284U_201203_174622/105120961/ccs	chr4	-	3546	9	NNC	ENSMUSG00000043872.15	novel	3852	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	172.979586945975	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCCTAATGAAGTTTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	126954945	126941385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126951193_126951387_126952585_126952825_126953302_126953453_126954788
m54284U_201203_174622/105122006/ccs	chr16	+	6300	1	Intergenic	novelGene_8049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATTGGGGTGGGGAGTG	NA	False	NA	11	True	AATAAA	-19	NA	8663262	8669562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_8663300_8669600
m54284U_201203_174622/105185621/ccs	chrX	-	3393	12	NIC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	815	junction_5	68.2767823514294	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
m54284U_201203_174622/105185980/ccs	chr11	+	1339	6	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	289.614916742905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693825_96697441_96697591_96698628
m54284U_201203_174622/105186636/ccs	chr5	+	7746	37	NIC	ENSMUSG00000031558.16	novel	7758	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_15	20.6287548022501	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCACGTTAACCTGT	NA	False	NA	16	True	AATAAA	-18	NA	48140495	48462853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
m54284U_201203_174622/105188076/ccs	chr16	+	175	1	Intergenic	novelGene_8046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTAATATGTTAG	NA	False	NA	NA	False	NA	NA	NA	8616739	8616914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_8616700_8616900
m54284U_201203_174622/105251514/ccs	chr17	+	2330	4	NIC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	202	junction_1	27.4023518860861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	908	False	NA	11	True	AATAAA	-23	NA	24851655	24857811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24851829_24852900_24854722_24857397_24857504_24857581
m54284U_201203_174622/105251731/ccs	chr14	+	4617	23	NIC	ENSMUSG00000039367.12	novel	724	8	NA	NA	72	0	intron_retention	FALSE	canonical	3	25	junction_1	73.2329578516564	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724568	20744920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_20724806_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
m54284U_201203_174622/105252030/ccs	chr11	-	2410	25	NIC	ENSMUSG00000018340.14	novel	2489	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_12	130.073269950269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGATGTGTGTGCTTTA	NA	False	NA	-4	True	NA	NA	NA	54924271	54869933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
m54284U_201203_174622/105383323/ccs	chr16	+	6385	36	NIC	ENSMUSG00000040785.20	novel	7415	46	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_27	32.8521735372631	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCGTTCACTGTCGTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	94171597	94270079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_94171831_94204172_94204228_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
m54284U_201203_174622/105449236/ccs	chrX	+	3197	17	NNC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_1	549.215601875757	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20555046_20559027_20559105_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201203_174622/105449763/ccs	chr14	+	8862	39	NIC	ENSMUSG00000060012.10	novel	8865	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	40	junction_3	13.4687490961881	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCCGAGGTCAAGCATAA	NA	False	NA	10	True	AATAAA	-20	NA	64889990	65047066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_64890106_64907072_64907167_64945940_64945954_64951522_64951584_64952836_64952930_64954922_64955104_64959755_64959844_64962148_64962284_64964522_64964636_64965661_64965774_64973596_64973810_64974943_64975055_64975955_64976091_64979755_64979887_64982324_64982412_64983747_64983939_64984377_64984589_64985894_64986058_64987661_64987809_64988954_64989105_64989416_64989546_64994862_64995034_64995999_64996158_64998117_64998251_65002451_65002599_65003159_65003190_65004802_65004903_65005061_65005189_65005868_65005925_65007990_65008113_65010359_65010537_65013685_65013779_65016762_65016916_65017139_65017218_65019790_65019845_65025856_65025969_65027013_65027148_65040422_65041180_65043479
m54284U_201203_174622/105514467/ccs	chr10	+	3998	17	NIC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	0	0	intron_retention	FALSE	canonical	2	17	junction_13	85.6535308306085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235753	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201203_174622/10553969/ccs	chr1	+	4765	31	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	562.632958113507	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGGTTCATCCTGCA	NA	False	NA	22	True	AATAAA	-24	NA	185095254	185160557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
m54284U_201203_174622/105578588/ccs	chr5	+	2456	8	NIC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	4657	junction_7	269.173261855555	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTAGATTTCCTTT	635	False	NA	38	True	AGTAAA	-25	NA	135807515	135819245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135816473_135818054_135818155_135818479_135818632_135818930
m54284U_201203_174622/105579477/ccs	chr3	+	4853	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	0	0	intron_retention	FALSE	canonical	2	14	junction_27	91.2975691656296	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808254	35910425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893240_35893364_35903582_35903714_35909253
m54284U_201203_174622/105645985/ccs	chr14	-	2906	9	NIC	ENSMUSG00000034190.10	novel	2649	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	245	junction_6	15.4495145554804	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTGTCTATTC	NA	False	NA	-2	True	ATTAAA	-15	NA	69969990	69954448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
m54284U_201203_174622/105711398/ccs	chr8	-	2101	13	NNC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	199.596728847611	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325913	4309730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_4310256_4310511_4310931_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318017_4318299_4318381_4319854_4320026_4324136_4324233_4325842
m54284U_201203_174622/105711737/ccs	chr11	-	3576	16	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_8	106.68387361213	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3539	False	NA	-2	True	AATAAA	-15	NA	115494719	115475080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
m54284U_201203_174622/105711916/ccs	chr17	+	3828	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_11	147.653539437202	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201203_174622/105777034/ccs	chr5	+	2441	10	NIC	ENSMUSG00000058013.12	novel	2428	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	236.171521683545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCCCATCCCTGCCT	NA	False	NA	4	True	TTTAAA	-16	NA	93241296	93324296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323262
m54284U_201203_174622/105777652/ccs	chr8	+	3496	15	NIC	ENSMUSG00000000738.19	novel	2896	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	221	junction_3	21.8156702713383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTCTCCATGTGTAT	NA	False	NA	15	True	AGTAAA	-15	NA	123792246	123824494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
m54284U_201203_174622/105777989/ccs	chr13	-	3151	5	NIC	ENSMUSG00000006191.18	novel	694	6	NA	NA	0	1035	intron_retention	FALSE	canonical	3	9	junction_1	84.3593504005335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTGTATAGAAATGT	NA	False	NA	NA	False	AATAAA	-12	NA	30039626	30019942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_30022686_30030210_30030324_30033921_30034092_30038880_30038925_30039545
m54284U_201203_174622/105842823/ccs	chr11	+	1661	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	133.856266196245	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	False	NA	15	True	AAAACA	-27	NA	6496909	6546744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_6497030_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
m54284U_201203_174622/105907347/ccs	chr8	-	2810	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	26	1275	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	189.167227605629	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTCCTTTTATTTTTC	NA	False	NA	NA	False	AATGAA	-13	NA	85413756	85398493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85413676
m54284U_201203_174622/105972101/ccs	chr12	-	3639	14	NIC	ENSMUSG00000020954.17	novel	2791	16	NA	NA	0	1013	combination_of_known_splicesites	FALSE	canonical	2	6	junction_13	94.4795147014677	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTCTTGGCCACATTA	NA	False	NA	-1	True	AATAAA	-21	NA	51738680	51655401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51738204
m54284U_201203_174622/105972653/ccs	chr6	+	1770	4	NNC	ENSMUSG00000042079.14	novel	2280	3	NA	NA	934	-468	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_1	2283.97154097856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTTTCTCATGCAAACTT	4722	False	NA	NA	False	ATTAAA	-14	NA	117884743	117902112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_117884880_117894430_117894560_117896059_117896121_117900668
m54284U_201203_174622/10617233/ccs	chr5	+	8895	18	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_9	26.4484875058949	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGAAGAAATCCTT	NA	False	NA	18	True	AATAAA	-16	NA	65921321	65987451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966509_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
m54284U_201203_174622/10617669/ccs	chr11	+	10739	6	NIC	ENSMUSG00000075595.10	novel	3982	6	NA	NA	-149	0	intron_retention	FALSE	canonical	3	40	junction_2	14.0285423334001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCACGTGTCTTCTCTTC	NA	False	NA	9	True	AGTAAA	-19	NA	95603687	95663179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_95604055_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
m54284U_201203_174622/10618799/ccs	chr3	+	2799	14	NIC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	96.628979935181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-10	True	NA	13	True	AATAAA	-14	NA	88593120	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
m54284U_201203_174622/10619366/ccs	chr12	+	723	4	NNC	ENSMUSG00000064326.14	novel	924	4	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_2	795.539369791897	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGACTCCCTCCCTTCCA	7053	False	NA	17	True	AATAAA	-17	NA	112611310	112615579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_112611519_112613271_112613464_112614258_112614416_112615413
m54284U_201203_174622/106236379/ccs	chr10	+	4944	21	NIC	ENSMUSG00000019943.11	novel	1404	6	NA	NA	289	255	combination_of_known_junctions	FALSE	canonical	3	221	junction_9	23.8756675299352	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACCTTTAGTCTTTTTTT	NA	False	NA	8	True	ATTAAA	-17	NA	98750556	98859940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_98750656_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
m54284U_201203_174622/106299583/ccs	chr2	+	5595	18	ISM	ENSMUSG00000036617.18	ENSMUST00000114614.8	5898	19	9567	-11	-177	0	3prime_fragment	FALSE	canonical	3	21	junction_12	53.6124114122788	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4619	False	NA	33	True	AATAAA	-25	NA	20524424	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
m54284U_201203_174622/106300433/ccs	chr4	+	3795	10	NIC	ENSMUSG00000045917.18	novel	3765	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	22.7888861801829	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGTAAGGGACCATGTT	NA	False	NA	18	True	AATAAA	-18	NA	63477017	63504594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_63477195_63479118_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
m54284U_201203_174622/106301062/ccs	chr5	-	4347	16	NIC	ENSMUSG00000045078.13	novel	4474	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_15	54.0106985286763	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGCTCTGTTTGTCCC	6130	False	NA	-1	True	AATAAA	-16	NA	143098749	142976647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143098653
m54284U_201203_174622/106301089/ccs	chrX	-	1007	8	NNC	ENSMUSG00000067764.12	novel	1656	9	NA	NA	0	-473	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_7	157.992508218147	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72336582	72326974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_72327390_72327485_72327591_72330297_72330398_72331073_72331195_72332226_72332262_72333427_72333498_72334015_72334153_72336558
m54284U_201203_174622/106366060/ccs	chr11	-	5140	9	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_6	89.3874117255892	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470513	61408075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61425440_61426096_61426210_61436975_61437738_61470392
m54284U_201203_174622/106366354/ccs	chr8	-	1349	7	NNC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	0	-1164	at_least_one_novel_splicesite	FALSE	canonical	3	192	junction_6	712.072483826065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTTTTGTTAGTGTAC	NA	False	NA	NA	False	AATAGA	-22	NA	4375086	4339506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556_4362615_4374885
m54284U_201203_174622/106366941/ccs	chr8	+	2193	17	NIC	ENSMUSG00000038416.16	novel	2301	18	NA	NA	0	-52	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	166.691319791254	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTTCATTGTGTCTTT	NA	False	NA	17	True	AATAAA	-19	NA	13807676	13831886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13807855_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
m54284U_201203_174622/106367190/ccs	chr5	+	3909	3	NIC	ENSMUSG00000007812.17	novel	4157	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	173	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTAGACTCTTTGTTTTGA	1331	False	NA	15	True	NA	NA	NA	145168564	145184111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_145168642_145179729_145179835_145180384
m54284U_201203_174622/106496874/ccs	chr10	+	1687	10	NIC	ENSMUSG00000034674.19	novel	3502	10	NA	NA	0	108	combination_of_known_junctions	FALSE	canonical	3	97	junction_9	344.226023937115	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGTTTTCTCTGAGGAGTC	NA	False	NA	NA	False	AAGAAA	-1	NA	82465692	82484821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484414
m54284U_201203_174622/106497505/ccs	chr10	+	4640	28	NIC	ENSMUSG00000039994.16	novel	4573	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	249	junction_22	47.2098313445726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6606	False	NA	11	True	AATAAA	-41	NA	128067948	128088801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
m54284U_201203_174622/106498567/ccs	chr1	+	429	10	NIC	ENSMUSG00000053332.14	novel	759	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	388	junction_4	1715.49943776955	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201203_174622/106693830/ccs	chr2	-	6236	40	NIC	ENSMUSG00000037110.21	novel	3095	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	6.39896441325705	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCATTTTGATTTGTGTG	NA	False	NA	NA	False	AATAAA	-30	NA	146353946	146100483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_146100865_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
m54284U_201203_174622/106694211/ccs	chr6	+	7474	18	NIC	ENSMUSG00000029833.18	novel	4042	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	444	junction_8	56.0890912671043	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847745	37943231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
m54284U_201203_174622/106694866/ccs	chr17	+	4218	10	NIC	ENSMUSG00000041130.11	novel	3352	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	262	junction_8	119.890485006366	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1176	False	NA	12	True	AATAAA	-20	NA	24888660	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
m54284U_201203_174622/106695395/ccs	chr5	-	188	1	Intergenic	novelGene_2503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAACTTTAC	NA	False	NA	NA	False	NA	NA	NA	28860694	28860506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_28860500_28860700
m54284U_201203_174622/106760285/ccs	chrX	+	2653	15	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	718.545430515208	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139658	74153383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_74139734_74140439_74140508_74140840_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
m54284U_201203_174622/106823886/ccs	chr14	-	1692	12	NNC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	0	664	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	65.9081504635099	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	58127733	58072484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_58073012_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
m54284U_201203_174622/106826563/ccs	chr5	+	4308	17	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_5	687.180104553202	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108217027_108217230_108221172_108221321_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201203_174622/10682913/ccs	chr9	-	3685	17	NIC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	531	junction_11	45.8133100201241	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	NA	False	NA	0	True	AGTAAA	-24	NA	31043149	31000697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31042841
m54284U_201203_174622/106891686/ccs	chr10	-	2752	3	NIC	ENSMUSG00000087177.8	novel	660	4	NA	NA	0	1614	intron_retention	FALSE	canonical	3	9	junction_1	7	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATAGTGGAGCATGTGTC	5658	False	NA	NA	False	NA	NA	NA	39608002	39528278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_39530685_39557468_39557546_39607733
m54284U_201203_174622/107021602/ccs	chr16	-	173	1	Intergenic	novelGene_8172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAAAATCCTAC	NA	False	NA	NA	False	NA	NA	NA	28776283	28776110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_28776100_28776300
m54284U_201203_174622/107023126/ccs	chr4	+	3803	7	NIC	ENSMUSG00000054405.15	novel	1837	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	2684	junction_6	211.872341019041	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2348	False	NA	19	True	AATAAA	-19	NA	132262877	132281053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132274020_132277687_132277780_132278845_132278922_132280327
m54284U_201203_174622/107088352/ccs	chr15	-	2982	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	148.84294481843	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79802252_79802440_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79855069
m54284U_201203_174622/107152448/ccs	chr6	+	1782	11	NIC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	276	combination_of_known_junctions	FALSE	canonical	3	81	junction_2	130.075362770972	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5726	False	NA	7	True	AATAAA	-17	NA	83254374	83280734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
m54284U_201203_174622/107153905/ccs	chr16	+	6182	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_10	115.814979061432	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2230	False	NA	22	True	AATAAA	-22	NA	21828261	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21852120_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
m54284U_201203_174622/107217226/ccs	chr4	-	183	1	Intergenic	novelGene_1997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCCACACCTACATTG	NA	False	NA	NA	False	NA	NA	NA	108324586	108324403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108324400_108324600
m54284U_201203_174622/107284639/ccs	chr11	-	206	1	Intergenic	novelGene_6098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACCTACAACACACTCTG	NA	False	NA	NA	False	NA	NA	NA	79907791	79907585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79907600_79907800
m54284U_201203_174622/107285000/ccs	chr13	+	4985	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	158.11464744146	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911825	73964873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
m54284U_201203_174622/107285047/ccs	chr16	-	3764	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	8907	205	at_least_one_novel_splicesite	FALSE	canonical	2	100	junction_31	169.206103657901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGATGCCAATGAGAGT	NA	False	NA	NA	False	TATAAA	-1	NA	8601265	8508438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8601193
m54284U_201203_174622/107285066/ccs	chr11	-	1005	6	NNC	ENSMUSG00000020799.17	novel	1403	8	NA	NA	4486	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	10.6320270880016	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTAGCACAGAGCTCTCA	NA	False	NA	-1	True	ATTAAA	-17	NA	72247636	72235547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_72235798_72236411_72236609_72242653_72242877_72245524_72245669_72246035_72246165_72247574
m54284U_201203_174622/107285171/ccs	chr6	-	5564	14	NIC	ENSMUSG00000034312.16	novel	6490	14	NA	NA	-101	601	intron_retention	FALSE	canonical	3	17	junction_13	8.16689811691508	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGGAGTGGTAACATTA	2746	False	NA	-1	True	AATACA	-21	NA	90713770	90637361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_90639938_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648583_90648614_90648961_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90713558
m54284U_201203_174622/107349637/ccs	chr5	-	9842	10	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	86	junction_9	19.7821468332771	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCAAGGCTATTTTGTTC	7053	False	NA	5	True	AATAAA	-26	NA	33011600	32947163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33011436
m54284U_201203_174622/107415978/ccs	chr15	-	3887	28	NIC	ENSMUSG00000022350.8	novel	4033	29	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_26	98.1457721585224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTTGCCCTGCTTGTGA	NA	False	NA	-3	True	AGTAAA	-16	NA	59246016	59203845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241728_59242035_59245889
m54284U_201203_174622/10747936/ccs	chr1	-	5628	30	NIC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	319	-118	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	69.3342384617281	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGACTTGAATTT	9153	False	NA	-40	True	ATTAAA	-12	NA	97697817	97633890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
m54284U_201203_174622/107479423/ccs	chr9	-	234	1	Intergenic	novelGene_5099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGCTTTGTTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	109792866	109792632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_109792600_109792900
m54284U_201203_174622/107479843/ccs	chr5	+	3912	15	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_3	758.397898499844	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201203_174622/107480161/ccs	chr18	+	2774	14	NIC	ENSMUSG00000024384.5	novel	2936	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	55.8815314941366	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGTCTCATCATTGT	NA	False	NA	17	True	AATAAA	-18	NA	32200820	32230572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_32201093_32203159_32203276_32212723_32213631_32216321_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
m54284U_201203_174622/107480797/ccs	chr4	+	175	1	Intergenic	novelGene_2004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAATTTAAATCAAA	NA	False	NA	NA	False	NA	NA	NA	109689356	109689531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_109689400_109689500
m54284U_201203_174622/107481284/ccs	chr11	-	4750	23	NNC	ENSMUSG00000042302.15	novel	5046	25	NA	NA	-229	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	7.80813307703963	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCTGCAATTTATT	9663	False	NA	-3	True	AATAAA	-21	NA	22237024	21955827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487_22235875_22237002
m54284U_201203_174622/10749589/ccs	chr13	+	4559	13	NNC	ENSMUSG00000041817.15	novel	6013	13	NA	NA	-345	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	73.6283837177545	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8372	False	NA	14	True	AATAAA	-20	NA	97207805	97266023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_97207887_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
m54284U_201203_174622/10749591/ccs	chr5	+	4757	9	NIC	ENSMUSG00000029636.12	novel	5196	10	NA	NA	263	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	46.4569693372265	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTCTGCTTATTTATA	NA	False	NA	15	True	AATAAA	-19	NA	146322057	146410425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_146322149_146358727_146358816_146372134_146372278_146388680_146388816_146390125_146390280_146392353_146392472_146403607_146403875_146405024_146405390_146407029
m54284U_201203_174622/10750174/ccs	chr5	+	5872	17	ISM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	0	613	0	0	5prime_fragment	FALSE	canonical	2	10	junction_13	5.58142846859117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAAAATGTTATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	107585862	107658074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741
m54284U_201203_174622/10750341/ccs	chr8	-	2802	22	NIC	ENSMUSG00000006276.11	novel	3129	24	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	69.7814859566126	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGAGACTATCTTCT	NA	False	NA	NA	False	TATAAA	-39	NA	73175316	73094842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
m54284U_201203_174622/107546354/ccs	chr18	+	2635	9	ISM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	75722	-878	75722	878	3prime_fragment	FALSE	canonical	3	30	junction_2	5.23061898822692	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTTGTATTCTTGTGT	9115	False	NA	NA	False	AATAAA	-20	NA	77957966	77971457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr18_+_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
m54284U_201203_174622/107547426/ccs	chr10	-	1582	4	NIC	ENSMUSG00000019773.8	novel	1940	5	NA	NA	178	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	362.55512990747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGTGTGCAGGTTTTT	NA	False	NA	-9	True	AATAAA	-45	NA	5755422	5749159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_5749823_5751151_5751243_5751868_5752533_5755258
m54284U_201203_174622/107610686/ccs	chr5	-	3165	9	NIC	ENSMUSG00000054814.15	novel	4557	9	NA	NA	0	-1312	combination_of_known_junctions	FALSE	canonical	3	126	junction_8	53.0377224247045	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGCAGCTAATTTATTA	NA	False	NA	-1	True	ATTAAA	-17	NA	74226409	74160698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74226307
m54284U_201203_174622/107676620/ccs	chr2	-	2211	4	NIC	ENSMUSG00000015839.7	novel	2475	5	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	268.06259633816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTTTTGAATTTA	NA	False	NA	1	True	AATAAA	-22	NA	75534889	75505856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_75507529_75508831_75508922_75509506_75509774_75534707
m54284U_201203_174622/107676683/ccs	chr7	+	229	1	Intergenic	novelGene_4073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAATTCAACAACAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	124657999	124658228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_124658000_124658200
m54284U_201203_174622/107676988/ccs	chr4	+	3447	8	NIC	ENSMUSG00000028729.16	novel	2960	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2261	junction_4	105.413084421939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGTCATGATGTCTGTT	NA	False	NA	6	True	NA	NA	NA	118478044	118484973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_118478195_118478278_118478363_118478557_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
m54284U_201203_174622/107678197/ccs	chr10	+	4808	31	NNC	ENSMUSG00000019889.11	novel	6177	32	NA	NA	0	83	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_16	52.8526778465912	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCATCCACATTTCAT	NA	False	NA	41	True	AATAAA	-29	NA	27950815	28472045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28438102_28438139_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
m54284U_201203_174622/107678290/ccs	chr13	-	2025	17	NNC	ENSMUSG00000021646.10	novel	2123	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_3	69.7078725826574	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTAGGGTTGTTGAGA	669	False	NA	-6	True	AATAAA	-15	NA	100152147	100085040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_100085465_100088663_100088750_100090643_100090759_100091220_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
m54284U_201203_174622/107742018/ccs	chr5	-	3396	1	Antisense	novelGene_ENSMUSG00000029501.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGTGAACCCAGGAATGGA	1588	False	NA	NA	False	AAGAAA	-10	NA	110385585	110382189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_110382200_110385600
m54284U_201203_174622/107743372/ccs	chr9	-	1635	5	NNC	ENSMUSG00000038742.8	novel	1582	6	NA	NA	1708	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	45.3176290200624	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTCTGTCTTCCTGT	NA	False	NA	-5	True	NA	NA	NA	20789315	20785103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20788582
m54284U_201203_174622/107744027/ccs	chr4	-	3894	7	NIC	ENSMUSG00000028639.15	novel	1628	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	10083	junction_6	305.596138719062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAGTTTTGTCATAATT	NA	False	NA	NA	False	AATAAA	-16	NA	119151697	119135177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_119135565_119136130_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
m54284U_201203_174622/107806873/ccs	chr3	+	2171	13	NNC	ENSMUSG00000028161.18	novel	441	2	NA	NA	50688	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	59.1629106789042	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	TATAAA	-18	NA	136427218	136641540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_136427358_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
m54284U_201203_174622/107806919/ccs	chr18	+	5647	4	NIC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	24.0554914035583	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGGATCTCTTTTT	NA	False	NA	22	True	GATAAA	-24	NA	24087748	24097730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24088081_24089395_24089911_24090111_24090254_24093072
m54284U_201203_174622/107807978/ccs	chrX	+	9602	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	1034	combination_of_known_junctions	FALSE	canonical	3	336	junction_14	190.839489145418	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	823	False	NA	NA	False	AATAGA	-15	NA	12937752	13037171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
m54284U_201203_174622/107874488/ccs	chr13	+	3541	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	0	-2132	intron_retention	FALSE	non_canonical	0	0	junction_19	103.886739025992	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCCTTTCAGTGGAAT	NA	False	NA	17	True	AATAAA	-26	NA	55782839	55826937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799859_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
m54284U_201203_174622/108006091/ccs	chr5	+	1458	1	Antisense	novelGene_ENSMUSG00000029192.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACCACCTAT	NA	False	NA	NA	False	NA	NA	NA	36687320	36688778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_36687300_36688800
m54284U_201203_174622/108068886/ccs	chr4	-	3500	7	NIC	ENSMUSG00000037553.15	novel	4580	8	NA	NA	0	1677	intron_retention	FALSE	canonical	3	285	junction_3	23.5259903558218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTAGTTTTT	NA	False	NA	-14	True	AATAAA	-21	NA	133360780	133334302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_133336085_133337680_133337794_133340233_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
m54284U_201203_174622/108069133/ccs	chr10	+	4522	18	NNC	ENSMUSG00000034902.18	novel	4323	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_14	53.352454761386	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTCTCCGGTGACTTA	5000	False	NA	NA	False	AATAAA	-16	NA	81128821	81155807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149568_81149928_81150825_81150953_81153159_81153238_81153599
m54284U_201203_174622/108069875/ccs	chr8	-	3342	4	NIC	ENSMUSG00000054648.9	novel	2792	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	68	junction_3	10.6770782520313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTTTGTCAATGTAT	NA	False	NA	-3	True	NA	NA	NA	70169550	70157789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70160345_70160760_70161116_70163335_70163635_70169417
m54284U_201203_174622/108135000/ccs	chr7	+	5265	15	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_8	92.233399590387	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	92	False	NA	20	True	ATTAAA	-20	NA	4140047	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
m54284U_201203_174622/10813624/ccs	chr4	-	199	1	Intergenic	novelGene_1885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAACCAGATGGAGCAT	NA	False	NA	NA	False	NA	NA	NA	59279196	59278997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_59279000_59279200
m54284U_201203_174622/10813771/ccs	chr7	-	2367	21	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_11	318.812186090808	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153827	143111443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
m54284U_201203_174622/10814749/ccs	chr13	+	5928	17	NIC	ENSMUSG00000033499.15	novel	5610	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	102.69004865979	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGATTTTTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	9143942	9224487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_9144217_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
m54284U_201203_174622/10815864/ccs	chr1	-	2797	10	NIC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	0	-82	combination_of_known_splicesites	FALSE	canonical	2	18	junction_6	419.259429394024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTTTCCTGAACAAT	9656	False	NA	-7	True	AATAAA	-16	NA	13660134	13635003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13649673_13649791_13649913_13650036_13651246_13651311_13659823
m54284U_201203_174622/108201989/ccs	chr11	-	185	1	Intergenic	novelGene_5767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAATCCCAGCACTCAGG	1923	False	NA	NA	False	NA	NA	NA	32408006	32407821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_32407800_32408000
m54284U_201203_174622/108266277/ccs	chr5	+	7212	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	60	0	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	31.2727566361149	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTGCTAGAGAAAG	NA	False	NA	10	True	AATAAA	-39	NA	150597351	150734155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
m54284U_201203_174622/108267849/ccs	chr15	+	6511	16	NNC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_15	169.30503700586	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGTTTCTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-15	NA	99870717	99914239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_99870865_99882797_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909681
m54284U_201203_174622/108333424/ccs	chr12	+	3177	9	NIC	ENSMUSG00000097451.12	novel	2368	11	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	212.155861043243	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109613186_109615587_109615677_109616505_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109624486_109624556_109626156_109626242_109627179
m54284U_201203_174622/108397954/ccs	chr17	+	6045	13	NIC	ENSMUSG00000002835.10	novel	5535	14	NA	NA	0	-804	intron_retention	FALSE	canonical	3	392	junction_3	52.4109694837085	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGTCTTCTGTCTCAA	NA	False	NA	22	True	TATAAA	-16	NA	56347438	56375028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
m54284U_201203_174622/108397965/ccs	chr2	-	1889	13	NNC	ENSMUSG00000027489.16	novel	1829	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	11.513277359447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTCTCCCCTGTCTCT	7287	False	NA	-15	True	AATAAA	-24	NA	154400810	154386318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388644_154388720_154388837_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503_154397613_154398976_154399002_154400657
m54284U_201203_174622/108398394/ccs	chr11	-	156	1	Intergenic	novelGene_6482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATCTTAA	531	False	NA	NA	False	NA	NA	NA	116774917	116774761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116774800_116774900
m54284U_201203_174622/108464037/ccs	chr15	-	4485	34	NIC	ENSMUSG00000022607.19	novel	4540	35	NA	NA	0	-230	combination_of_known_splicesites	FALSE	canonical	3	10	junction_31	57.2755330401397	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1656	False	NA	-9	True	ATTAAA	-19	NA	73295061	73077180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73236889_73237045_73263607_73263730_73266496_73266594_73294857
m54284U_201203_174622/108528586/ccs	chr16	+	4922	47	NIC	ENSMUSG00000033653.19	novel	4838	47	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.942753613068	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241918	21463430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_21241976_21253489_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
m54284U_201203_174622/108528965/ccs	chr8	+	4891	12	ISM	ENSMUSG00000036779.13	ENSMUST00000118952.8	4597	13	349	0	349	0	3prime_fragment	FALSE	canonical	3	98	junction_5	15.7967461865615	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	14	True	AGTAAA	-15	NA	88926190	88986350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
m54284U_201203_174622/108659069/ccs	chrX	+	3496	26	NNC	ENSMUSG00000001924.16	novel	4044	26	NA	NA	0	-449	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_24	748.843338489433	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAAGTATGTCTA	NA	False	NA	72	True	AATAAA	-41	NA	20524659	20548969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548351_20548449_20548616
m54284U_201203_174622/108660280/ccs	chr1	-	2480	11	NIC	ENSMUSG00000026155.14	novel	2289	10	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	170.714498505546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTATTTGTGGGTTTT	NA	False	NA	-2	True	ATTAAA	-17	NA	23961508	23884705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23910518_23910600_23915454_23915531_23916789_23916876_23930940_23931075_23961118
m54284U_201203_174622/108724439/ccs	chr6	+	4345	7	NIC	ENSMUSG00000025702.16	novel	4450	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	11.9256958799989	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATGAGAGTGTTTT	NA	False	NA	10	True	AATAAA	-20	NA	116314984	116386501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_116315177_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
m54284U_201203_174622/108726435/ccs	chr7	+	5681	12	NNC	ENSMUSG00000031028.15	novel	747	2	NA	NA	2755	-136	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.49078868019691	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAAATGTATTTATTTA	7227	False	NA	1	True	AATAAA	-15	NA	108619503	108633531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_108619638_108619723_108619776_108620073_108620237_108621816_108621961_108623696_108623865_108624814_108624934_108625796_108625995_108626209_108626323_108626959_108627078_108628468_108628568_108628760_108628933_108629330
m54284U_201203_174622/108726495/ccs	chr7	+	2171	7	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	322.760316988043	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896248_43896674_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/108790215/ccs	chr4	-	4345	25	NNC	ENSMUSG00000028434.13	novel	6746	26	NA	NA	-316	1097	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	62.0543976192573	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTCTTGGATTATTCC	-1	True	NA	NA	False	NA	NA	NA	57143753	56994580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_56995804_56999581_56999728_57007905_57007978_57016853_57016932_57019771_57019968_57024337_57024437_57027608_57027677_57032114_57032241_57038502_57038622_57040843_57041053_57064798_57064864_57068304_57068339_57071051_57071083_57073261_57073372_57076290_57076461_57076533_57076604_57076913_57077003_57077163_57077252_57078874_57078996_57084022_57084076_57085995_57086041_57087985_57088065_57088801_57088845_57103423_57103529_57142847
m54284U_201203_174622/108790328/ccs	chr7	+	2303	6	NIC	ENSMUSG00000003184.16	novel	1797	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	134	junction_1	18.4499322491981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGTCGACTGCGTC	NA	False	NA	5	True	AATAAA	-20	NA	44647089	44651814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44651213_44651587
m54284U_201203_174622/108792353/ccs	chr10	-	2781	11	NIC	ENSMUSG00000064181.7	novel	1844	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_10	85.4016978753936	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGAGGTTGGGTTATTTT	NA	False	NA	-5	True	ATTAAA	-16	NA	116786285	116741688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775382_116786164
m54284U_201203_174622/10881577/ccs	chr11	-	1668	7	NIC	ENSMUSG00000056962.12	novel	2072	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	131.15311238735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGACAGCTTTCTTT	NA	False	NA	-7	True	AATAAA	-16	NA	116734181	116728257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116728590_116729815_116729955_116730663_116730758_116731235_116731372_116731894_116732182_116733157_116733547_116733890
m54284U_201203_174622/108986752/ccs	chr6	+	3047	10	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-164	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.4360537752075	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTGAGCTACTGTGTA	NA	False	NA	8	True	AATAAA	-19	NA	124985943	125014833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125010202_125010282_125012675_125012835_125013268
m54284U_201203_174622/108987994/ccs	chr9	-	181	1	Intergenic	novelGene_4827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTTCTTTTTAATGTG	NA	False	NA	NA	False	NA	NA	NA	59429802	59429621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_59429600_59429800
m54284U_201203_174622/109053188/ccs	chrX	-	5849	29	NIC	ENSMUSG00000062949.14	novel	6044	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_18	19.8131578626375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGGTATTCGAGTGTCT	NA	False	NA	-7	True	AATAAA	-14	NA	59449172	59268649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
m54284U_201203_174622/109054491/ccs	chr5	+	1033	7	NNC	ENSMUSG00000029430.14	novel	2423	6	NA	NA	0	-1161	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	5667.76133544414	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGTGAATCATCCCT	545	False	NA	NA	False	AATAAA	-19	NA	129097335	129100226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_129097363_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
m54284U_201203_174622/109118356/ccs	chr1	-	4257	1	Antisense	novelGene_ENSMUSG00000103945.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAACCAGGCAAAACCCA	NA	False	NA	NA	False	AGTAAA	-23	NA	43604769	43600512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_43600500_43604800
m54284U_201203_174622/109183904/ccs	chr19	+	5283	31	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_25	84.1752734873292	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAAGGCTCTTAAACT	NA	False	NA	13	True	AATAAA	-24	NA	34899760	34953145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936903_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
m54284U_201203_174622/109184801/ccs	chr14	+	1916	10	NNC	ENSMUSG00000021939.9	novel	801	6	NA	NA	383	1263	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	2355.85194676188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTGACATTGGCAGGG	NA	False	NA	17	True	AATAAA	-12	NA	63360345	63380575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_63360420_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
m54284U_201203_174622/109249482/ccs	chr5	+	3201	15	NIC	ENSMUSG00000038828.14	novel	3947	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	358	junction_2	22.8728740508695	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCTGTCTGAATCTT	NA	False	NA	19	True	AATAAA	-19	NA	31026976	31034812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31027163_31027932_31028133_31028763_31029200_31029415_31029499_31029844_31029951_31030030_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
m54284U_201203_174622/109314724/ccs	chr5	-	4378	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_26	181.80350599727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563772
m54284U_201203_174622/109315869/ccs	chr7	+	1692	9	NIC	ENSMUSG00000063229.16	novel	1588	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_2	3566.89334146327	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495266	46505051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_46495342_46496812_46496921_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
m54284U_201203_174622/109315884/ccs	chr15	+	1204	7	NIC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	1700.84897102071	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACATTTTAGCTGGTCA	NA	False	NA	25	True	AATAAA	-15	NA	76227732	76230132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76227893_76228479_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
m54284U_201203_174622/109380711/ccs	chrX	+	1154	1	Genic_Genomic	ENSMUSG00000025626.17	novel	NA	NA	NA	NA	-4	-27201	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGCGAAGCATGTAATA	NA	False	NA	NA	False	NA	NA	NA	52001138	52002292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chrX_+_52001100_52002300
m54284U_201203_174622/109381437/ccs	chr2	+	1104	3	NNC	ENSMUSG00000063019.6	novel	1107	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	230.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGTGTTGCTACTG	5217	False	NA	30	True	AATAAA	-17	NA	157209513	157238683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_157209561_157220971_157221175_157237829
m54284U_201203_174622/109446563/ccs	chr6	+	2290	14	NNC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	41.7851648315524	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	False	NA	11	True	ATTAAA	-21	NA	146626492	146678054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_146626546_146659958_146660104_146661622_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
m54284U_201203_174622/109447320/ccs	chr14	+	4525	42	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_41	179.305136416308	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
m54284U_201203_174622/10945731/ccs	chr16	+	1736	7	NIC	ENSMUSG00000055692.22	novel	1627	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	181	junction_2	34.7754702819866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGTGTGGGGTTTCATC	NA	False	NA	38	True	AATAAA	-23	NA	17094172	17096525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_17094333_17094497_17094622_17094700_17095115_17095205_17095266_17095391_17095457_17095532_17095756_17095835
m54284U_201203_174622/10945785/ccs	chr4	+	4076	17	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	152.290429771539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225248	107273543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
m54284U_201203_174622/10946005/ccs	chr4	-	9847	46	NIC	ENSMUSG00000063077.16	novel	5992	47	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_22	22.5611268434102	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCGTGCTTTAGTCTTT	7239	False	NA	-2	True	AATAAA	-21	NA	149392150	149260775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
m54284U_201203_174622/10946040/ccs	chr2	-	2857	14	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	154.660651620777	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652910	93525975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_93526617_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93651954_93652027_93652731
m54284U_201203_174622/10946891/ccs	chr16	-	5442	21	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	126	junction_3	16.4233827209866	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	False	NA	1	True	AATAAA	-28	NA	10994206	10954455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
m54284U_201203_174622/109512147/ccs	chr4	-	3871	19	NIC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_12	47.9601171756927	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
m54284U_201203_174622/109513386/ccs	chr1	+	3568	7	NIC	ENSMUSG00000026254.18	novel	3394	7	NA	NA	0	-237	intron_retention	FALSE	canonical	3	212	junction_6	831.352646126914	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTGGACTTGT	NA	False	NA	15	True	AATAAA	-18	NA	87141700	87167973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
m54284U_201203_174622/109576532/ccs	chr4	+	3341	15	NNC	ENSMUSG00000029071.17	novel	3358	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_11	38.5097390279394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931917	155943760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940546_155940721_155940818_155940987_155941070_155941278_155942449
m54284U_201203_174622/109578384/ccs	chr7	-	2580	21	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	1234	junction_20	95.4381998992018	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153827	143111442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
m54284U_201203_174622/109578540/ccs	chr17	+	7257	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	38.3054391264043	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9390	False	NA	15	True	NA	NA	NA	36152567	36170562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_36152658_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
m54284U_201203_174622/109578543/ccs	chr17	-	5409	40	NIC	ENSMUSG00000002496.11	novel	5432	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_38	54.6963406257084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851601	24815462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850970_24851086_24851511
m54284U_201203_174622/109643002/ccs	chr11	+	2678	1	Antisense	novelGene_ENSMUSG00000018736.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCAGACATGTAATTCA	8730	False	NA	NA	False	NA	NA	NA	68713236	68715914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_68713200_68715900
m54284U_201203_174622/109709133/ccs	chr9	-	696	2	Antisense	novelGene_ENSMUSG00000093803.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	70	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGGGGAGTGATGGCGTC	NA	False	NA	-2	True	AATAAA	-14	NA	124198142	124195695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_124196190_124197940
m54284U_201203_174622/109773071/ccs	chr13	+	4953	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_21	160.695235391987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911825	73964873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73961657_73961792_73962961
m54284U_201203_174622/109773867/ccs	chr4	-	148	1	Intergenic	novelGene_1969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATAATAAGTGCT	NA	False	NA	NA	False	NA	NA	NA	105158507	105158359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_105158400_105158500
m54284U_201203_174622/109906487/ccs	chr16	+	2301	11	NIC	ENSMUSG00000022841.16	novel	2937	12	NA	NA	0	-136	intron_retention	FALSE	canonical	3	317	junction_4	750.589828068566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGGGCCCGCAGAG	1394	False	NA	NA	False	AATAAA	-26	NA	20354268	20362670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359564_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
m54284U_201203_174622/109906638/ccs	chr2	-	4172	11	NIC	ENSMUSG00000037197.12	novel	1599	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1260	junction_7	88.5076267900117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTGCTCTCTGGTTGT	NA	False	NA	-28	True	TATAAA	-14	NA	11608073	11590251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
m54284U_201203_174622/109970681/ccs	chr1	+	2491	22	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	106	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	193.442368971688	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	428	False	NA	22	True	TATAAA	-28	NA	72346691	72434111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72403837_72403886_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
m54284U_201203_174622/109971548/ccs	chr7	-	3959	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	875	junction_25	152.836665757926	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198273	44182172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
m54284U_201203_174622/110101316/ccs	chr1	-	2518	1	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	0	-5468	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCCTATGTGTTACCTAA	NA	False	NA	NA	False	NA	NA	NA	121255475	121252957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_121253000_121255500
m54284U_201203_174622/11011477/ccs	chr11	-	1179	6	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	-19012	234	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	277.055517902098	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTGTCCGTTTTCTTT	NA	False	NA	-3	True	TATAAA	-20	NA	86512133	86475521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86512073
m54284U_201203_174622/11012272/ccs	chr6	-	170	1	Intergenic	novelGene_3556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATATATATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	136370768	136370598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_136370600_136370800
m54284U_201203_174622/11012465/ccs	chr17	+	4574	23	NIC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	29.4305457780414	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
m54284U_201203_174622/110168139/ccs	chr8	-	169	1	Intergenic	novelGene_4324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATGCGTGATGG	NA	False	NA	NA	False	NA	NA	NA	70960165	70959996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_70960000_70960200
m54284U_201203_174622/110168341/ccs	chr7	+	4140	16	NNC	ENSMUSG00000030671.10	novel	719	4	NA	NA	-100	-1322	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	18.5021320092818	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTATTGAACTTGCGT	NA	False	NA	1	True	AATAAA	-11	NA	114014415	114137164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_114014487_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
m54284U_201203_174622/110168689/ccs	chr17	-	3529	15	NIC	ENSMUSG00000024081.10	novel	4070	16	NA	NA	0	99	intron_retention	FALSE	canonical	3	465	junction_12	59.5380601988753	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTCATTTATAAAATT	NA	False	NA	-38	True	AATAAA	-14	NA	79244495	79227174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
m54284U_201203_174622/110231957/ccs	chr18	+	1656	1	Intergenic	novelGene_8967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTAAGACAGTGCTCAC	NA	False	NA	NA	False	GATAAA	-18	NA	56866827	56868483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_56866800_56868500
m54284U_201203_174622/110297221/ccs	chr8	-	3342	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	313.771143635791	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426975	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
m54284U_201203_174622/110297275/ccs	chr16	+	189	1	Intergenic	novelGene_8338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAATGCAAAACCCTTAC	NA	False	NA	NA	False	NA	NA	NA	97792785	97792974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_97792800_97793000
m54284U_201203_174622/110298414/ccs	chr3	+	4270	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	63	0	intron_retention	FALSE	canonical	3	134	junction_1	52.3518768361218	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8681	False	NA	15	True	ATTAAA	-17	NA	88522736	88555359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
m54284U_201203_174622/110299025/ccs	chr7	-	1682	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	247.870604821737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5729	False	NA	-8	True	AATAAA	-17	NA	19556695	19542386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19542982_19543066_19543185_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
m54284U_201203_174622/110365364/ccs	chr8	+	227	1	Intergenic	novelGene_4291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTTTAA	5004	False	NA	NA	False	NA	NA	NA	48141153	48141380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_48141200_48141400
m54284U_201203_174622/110430366/ccs	chr17	-	5124	8	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	73	junction_4	55.3711042302162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGGCAAACAGCCAGT	NA	False	NA	-16	True	ATTAAA	-18	NA	32583437	32573034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32578469_32579011_32579402_32580434_32580939_32581766_32581938_32583155
m54284U_201203_174622/110430495/ccs	chr9	-	2820	18	NNC	ENSMUSG00000032116.19	novel	5867	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_17	428.551596179778	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGGGACCAGAGGAG	NA	False	NA	-19	True	NA	NA	NA	36678915	36643721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678750
m54284U_201203_174622/110495019/ccs	chr17	-	3584	9	NIC	ENSMUSG00000024096.18	novel	3811	10	NA	NA	95	0	combination_of_known_junctions	FALSE	canonical	1	29	junction_4	219.927225179149	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCTTCTATTGTCCACT	NA	False	NA	NA	False	AATAAA	-31	NA	66191854	66155412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
m54284U_201203_174622/110625885/ccs	chr12	+	1280	9	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_7	397.317253589622	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGTTTATTGAATG	NA	False	NA	23	True	AATAAA	-29	NA	105976541	106041668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036786_106036875_106041265
m54284U_201203_174622/110625973/ccs	chr4	+	6053	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_9	37.0730322771448	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150654044	150706423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701212_150701937_150702862_150703010_150703481_150703663_150703912
m54284U_201203_174622/110626122/ccs	chr7	-	9195	13	NIC	ENSMUSG00000031004.9	novel	10061	14	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_8	77.8015191939649	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	False	NA	-18	True	AATAAA	-19	NA	135318184	135291512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
m54284U_201203_174622/110626887/ccs	chr2	+	1577	5	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078866.11	novel	794	4	NA	NA	0	-450	multi-exon	FALSE	canonical	3	38	junction_3	84.7772817445806	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATTCACATGTGCA	NA	False	NA	NA	False	NA	NA	NA	177156525	177200212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177156642_177193535_177193591_177194885_177194988_177198701_177198829_177199035
m54284U_201203_174622/110691683/ccs	chr6	+	5948	19	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	0	889	combination_of_known_junctions	FALSE	canonical	3	61	junction_16	26.6106471775843	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAGTTTCAAGTCTTTG	NA	False	NA	-4	True	AATAAA	-14	NA	120643329	120744754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
m54284U_201203_174622/110693211/ccs	chrX	-	4335	10	NIC	ENSMUSG00000031386.15	novel	8262	26	NA	NA	-726	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_8	113.119515077453	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGTATTTACCCGTG	NA	False	NA	-13	True	ATTAAA	-20	NA	72993585	72986400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72992025_72992507_72992672_72992803
m54284U_201203_174622/110755847/ccs	chr11	+	3371	13	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	212	0	intron_retention	FALSE	canonical	3	202	junction_2	35.4502781684745	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540365	113553226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
m54284U_201203_174622/110757144/ccs	chr11	-	3405	6	NIC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_3	39.9769933836951	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2743	False	NA	NA	False	AATAAA	-11	NA	82762036	82694647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703637_82709241_82709430_82761833
m54284U_201203_174622/110758120/ccs	chr4	+	5397	20	NIC	ENSMUSG00000028528.18	novel	5258	19	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	27.8557821347373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAGAAATATACATTAT	9122	False	NA	7	True	ATTAAA	-15	NA	101364993	101499996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_101365380_101389194_101389260_101454997_101455149_101456147_101456198_101456291_101456441_101463785_101463909_101468421_101468556_101470058_101470254_101471369_101471488_101472777_101472858_101473682_101473877_101473981_101474063_101475590_101476026_101480857_101480993_101482889_101482959_101485233_101485354_101492187_101492452_101493954_101494098_101496462_101496640_101497668
m54284U_201203_174622/11076380/ccs	chr15	-	1464	7	NNC	ENSMUSG00000046034.9	novel	1491	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	84.6707676172177	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTTTGTATTTGATT	NA	False	NA	-5	True	AATGAA	-40	NA	27630779	27606004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_27606548_27608704_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
m54284U_201203_174622/11077298/ccs	chr16	-	2483	18	NIC	ENSMUSG00000000028.16	novel	1747	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	368	junction_7	54.0053822769443	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	False	NA	-8	True	AATAAA	-15	NA	18630376	18599202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264
m54284U_201203_174622/11077806/ccs	chr8	+	7352	42	NIC	ENSMUSG00000004677.18	novel	6316	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.3800773720413	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725357	71813357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801546_71801578_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
m54284U_201203_174622/110821419/ccs	chr6	+	2549	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	309	junction_2	349.818076134628	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808316	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201203_174622/110822554/ccs	chr5	+	168	1	Intergenic	novelGene_2990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAGATTAAAA	NA	False	NA	NA	False	NA	NA	NA	136079517	136079685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_136079500_136079700
m54284U_201203_174622/110822588/ccs	chr5	-	4094	28	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	72.9308445945778	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777621	108717285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_108717454_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
m54284U_201203_174622/110952492/ccs	chr5	-	188	1	Intergenic	novelGene_2850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTAATGTTACTTCTG	NA	False	NA	NA	False	NA	NA	NA	121400445	121400257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121400300_121400400
m54284U_201203_174622/110953320/ccs	chr8	-	2993	1	Intergenic	novelGene_4543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGCGTTCTGTTCTATT	NA	False	NA	-4	True	NA	NA	NA	120313720	120310727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_120310700_120313700
m54284U_201203_174622/111018123/ccs	chr2	+	3126	1	NIC	ENSMUSG00000027203.16	novel	1020	7	NA	NA	-183	1814	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCTGTTGAAATTAAGA	NA	False	NA	NA	False	NA	NA	NA	125089636	125092762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_125089600_125092800
m54284U_201203_174622/111019307/ccs	chr14	-	185	1	Intergenic	novelGene_7512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTGTAAAAAAAAAGATCAA	NA	False	NA	NA	False	NA	NA	NA	64859117	64858932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_64858900_64859100
m54284U_201203_174622/111085356/ccs	chr1	+	6040	11	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	418	junction_1	55.2511538341056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTGTGTGGTATGTG	NA	False	NA	16	True	AGTAAA	-16	NA	171975684	172023956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172016637_172020084_172020205_172021351_172021469_172022122
m54284U_201203_174622/111085506/ccs	chr9	+	4316	25	NIC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_19	223.484712377976	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCCTTTTTGAAAT	NA	False	NA	20	True	AATAAA	-26	NA	48896684	48953817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48944876_48944973_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
m54284U_201203_174622/111216220/ccs	chr2	+	8488	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	132.856178183902	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962843	52012395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201203_174622/111216619/ccs	chr16	-	2366	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	963	-1979	963	1979	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACATCACTTATTCAATG	4938	False	NA	NA	False	NA	NA	NA	55794017	55791651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_55791700_55794000
m54284U_201203_174622/111281409/ccs	chr3	+	6660	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	17.5002967921014	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6168	False	NA	12	True	AAGAAA	-13	NA	87524881	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
m54284U_201203_174622/111347543/ccs	chr7	-	6830	27	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_1	34.2514198729572	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65020987	64945912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_64947416_64949456_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
m54284U_201203_174622/111413836/ccs	chr6	+	4384	12	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	93	junction_5	32.626866179488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTAAACTTCTACA	9744	False	NA	22	True	AATAAA	-24	NA	86381263	86409167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
m54284U_201203_174622/11142414/ccs	chr12	-	4539	1	Antisense	novelGene_ENSMUSG00000061458.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17425600	17421061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_-_17421100_17425600
m54284U_201203_174622/11143045/ccs	chr1	-	3309	9	NNC	ENSMUSG00000042305.13	novel	3149	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	287.691648080023	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGCTCAACTTGTGAGT	NA	False	NA	-9	True	AATAAA	-16	NA	134289717	134273834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_134275933_134277820_134277977_134280092_134280174_134280712_134280873_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
m54284U_201203_174622/11143730/ccs	chr12	-	172	1	Intergenic	novelGene_6815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAGTCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	85763899	85763727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85763700_85763900
m54284U_201203_174622/111476883/ccs	chr3	-	175	1	Intergenic	novelGene_1553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTATGTTTATTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	94448889	94448714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_94448700_94448900
m54284U_201203_174622/1115866/ccs	chr7	+	2976	17	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	860	junction_1	81.3302488315387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201203_174622/111608717/ccs	chr11	-	2046	7	NIC	ENSMUSG00000017453.5	novel	1998	8	NA	NA	292	0	intron_retention	FALSE	canonical	3	232	junction_1	25.5304828696121	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCGGTGGTCTTTATTT	NA	False	NA	-2	True	AATAAA	-22	NA	77784630	77771440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_77772081_77772326_77772403_77772943_77773590_77773954_77774138_77774604_77774819_77782937_77783087_77784492
m54284U_201203_174622/111674308/ccs	chr4	+	4035	21	NIC	ENSMUSG00000028397.14	novel	4196	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	74.8175113192092	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	False	NA	14	True	ATTAAA	-15	NA	74170172	74324097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_74170324_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
m54284U_201203_174622/111674358/ccs	chr2	+	2253	7	NIC	ENSMUSG00000026856.15	novel	2251	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	287	junction_5	28.1706111636459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCATACATTACTT	NA	False	NA	8	True	AATAAA	-15	NA	30282441	30290540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286543_30287030_30287160_30287479_30287570_30289153
m54284U_201203_174622/111674494/ccs	chr11	+	1306	4	NNC	ENSMUSG00000001558.6	novel	2017	5	NA	NA	-788	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	6.59966329107444	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGAGTACTGGAAAATG	NA	False	NA	NA	False	AATAAA	-16	NA	100331954	100347848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_100332042_100337946_100338565_100347109_100347260_100347397
m54284U_201203_174622/111674731/ccs	chr4	+	203	1	Intergenic	novelGene_2358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGGACAAGATTCAAG	NA	False	NA	NA	False	NA	NA	NA	147473243	147473446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_147473200_147473400
m54284U_201203_174622/111675107/ccs	chr4	+	4470	9	NIC	ENSMUSG00000066037.15	novel	2683	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	289	junction_1	103.204817595886	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	NA	False	NA	32	True	AATAAA	-26	NA	136038278	136067992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
m54284U_201203_174622/111675227/ccs	chr6	+	180	1	Intergenic	novelGene_3564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAAAAGGTATATTTTAT	NA	False	NA	NA	False	NA	NA	NA	140377534	140377714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_140377500_140377700
m54284U_201203_174622/111675769/ccs	chr19	+	5620	9	NIC	ENSMUSG00000071644.11	novel	1864	10	NA	NA	154	-299	intron_retention	FALSE	canonical	3	5201	junction_1	1346.70648597792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTCCTGTCCTGCCT	997	False	NA	11	True	ATTAAA	-16	NA	8944558	8955544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8954855_8954948_8955074_8955307
m54284U_201203_174622/111675881/ccs	chr19	+	175	1	Intergenic	novelGene_9176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAAGATATTTA	NA	False	NA	NA	False	NA	NA	NA	21572575	21572750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_21572600_21572800
m54284U_201203_174622/111870315/ccs	chr2	+	6237	39	NIC	ENSMUSG00000044308.18	novel	8072	39	NA	NA	0	-54	combination_of_known_junctions	TRUE	non_canonical	3	58	junction_28	22.6070858893837	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTACATTTTTTTCTT	4326	False	NA	13	True	AGTAAA	-18	NA	69727589	69852510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
m54284U_201203_174622/111871401/ccs	chr11	-	1921	15	NIC	ENSMUSG00000014195.17	novel	2330	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	912.841169097889	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTCCTTGGCTTTGGC	5891	False	NA	-21	True	AATAAA	-15	NA	100510485	100473643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480504_100480605_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
m54284U_201203_174622/111872724/ccs	chr19	+	2643	11	NIC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	49.8982965641113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159032	42180156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177960_42178043_42178821
m54284U_201203_174622/111935493/ccs	chr5	-	2411	15	NNC	ENSMUSG00000036980.14	novel	2304	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_14	167.30713843536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCCTCCCGCATCACA	1952	False	NA	-4	True	AATAAA	-18	NA	138185488	138176878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185324
m54284U_201203_174622/111938234/ccs	chr8	-	213	1	Intergenic	novelGene_4298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTTAGTTATCAACTCTG	NA	False	NA	NA	False	NA	NA	NA	60971182	60970969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_60971000_60971200
m54284U_201203_174622/112068456/ccs	chr14	+	158	1	Intergenic	novelGene_7522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAAAATATTAAAA	NA	False	NA	NA	False	NA	NA	NA	67459646	67459804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_67459600_67459800
m54284U_201203_174622/112069290/ccs	chr8	+	3758	26	NIC	ENSMUSG00000031862.12	novel	3915	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_13	62.842609748482	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTGCCACTTATATCT	9251	False	NA	NA	False	AATAAA	-23	NA	70243899	70260399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252481_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
m54284U_201203_174622/11207778/ccs	chr10	-	3783	12	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	345	junction_11	33.8721465816619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332176	81322290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
m54284U_201203_174622/11208400/ccs	chr13	-	2249	6	NIC	ENSMUSG00000025871.19	novel	2502	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	208.936736836776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGTCTGTCTTGTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	54713169	54699035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54712327_54712435_54712994
m54284U_201203_174622/11208557/ccs	chr19	+	3095	10	NIC	ENSMUSG00000025049.7	novel	3260	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	71.9305220334178	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGTACAAATTGAGTA	NA	False	NA	15	True	AATAAA	-27	NA	47056184	47071918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47070247_47070426_47070582_47070761_47070865
m54284U_201203_174622/11208900/ccs	chr14	+	2038	9	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	0	-95	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	64.0858798800485	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTGAATACTTCTTTAA	NA	False	NA	14	True	ATTAAA	-19	NA	31807330	31825064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_31807524_31807805_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
m54284U_201203_174622/11209027/ccs	chr3	-	832	4	NNC	ENSMUSG00000027931.13	novel	4066	22	NA	NA	2379	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	63.2824356884805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTCTCTTCTTGGGAGA	NA	False	NA	-1	True	ATTAAA	-17	NA	90362404	90357897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_90358490_90358612_90358705_90362124_90362224_90362355
m54284U_201203_174622/112132468/ccs	chr14	-	1750	9	NIC	ENSMUSG00000006288.9	novel	1842	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	273.975820100972	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATAGTTCTGTCTCTTT	NA	False	NA	-6	True	ATTAAA	-21	NA	51022976	51002871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51014718_51014870_51015213_51015426_51018931_51019065_51022894
m54284U_201203_174622/112134320/ccs	chr2	+	1861	11	NNC	ENSMUSG00000059005.14	novel	5150	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_9	3493.46504920258	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTGGTTTTTGTGCAT	7481	False	NA	NA	False	AAAAAG	-13	NA	75489610	75496465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495492_75495577_75495646_75495741
m54284U_201203_174622/112198748/ccs	chr15	-	4131	6	ISM	ENSMUSG00000022387.18	ENSMUST00000088911.4	4702	8	-3	12051	0	1998	5prime_fragment	FALSE	canonical	0	0	junction_5	248.421094112396	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGTAATAATGAAAAGT	NA	False	NA	7	True	AATAAA	-28	NA	88618436	88595104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
m54284U_201203_174622/112198974/ccs	chr2	-	914	6	NIC	ENSMUSG00000027613.16	novel	1500	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	639.961123819252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCAGTGTGCTGTGTGTG	NA	False	NA	-8	True	ATTAAA	-17	NA	155668583	155661756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668565
m54284U_201203_174622/112199764/ccs	chr6	+	2397	10	NIC	ENSMUSG00000013736.17	novel	2283	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_3	364.812585065568	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTCGTTATTTCTGT	NA	False	NA	12	True	AATAAA	-21	NA	106746126	106759435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_106746218_106746790_106746965_106747762_106747877_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
m54284U_201203_174622/112199834/ccs	chr5	+	5242	5	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	2504	junction_1	183.74846938138	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296340	122313332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122296679_122306237_122306370_122306981_122309990_122310794_122311344_122312117
m54284U_201203_174622/112330530/ccs	chr1	+	4649	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	71.2156349874567	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031057	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201203_174622/112395768/ccs	chr6	+	1364	6	NIC	ENSMUSG00000036371.7	novel	1617	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	2521.68724468361	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCACTTCATTTGT	5866	False	NA	37	True	AATATA	-25	NA	67243988	67261295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_67244394_67248181_67248305_67249847_67249923_67254744_67254923_67258631_67258806_67260886
m54284U_201203_174622/112396427/ccs	chr2	-	1481	4	NIC	ENSMUSG00000039983.14	novel	1870	4	NA	NA	0	-382	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	18.6726180988812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTGTGTAGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-15	NA	118859858	118848641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_118849646_118852549_118852707_118857618_118857869_118859788
m54284U_201203_174622/112592925/ccs	chr13	-	5947	23	NNC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	0	-196	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	87.0067443001921	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAACAGTTTTCATAG	NA	False	NA	NA	False	AATAAA	-16	NA	46881416	46833576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46857662_46857697_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
m54284U_201203_174622/112658917/ccs	chr5	-	1306	7	NNC	ENSMUSG00000037224.16	novel	712	4	NA	NA	0	-1319	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	8.19891591749923	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTTTTTATTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	34445793	34385250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_34385544_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
m54284U_201203_174622/112722943/ccs	chr17	-	195	1	Intergenic	novelGene_8524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACAATTGGAGAAAAGC	7619	False	NA	NA	False	NA	NA	NA	32516454	32516259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_32516300_32516500
m54284U_201203_174622/112722954/ccs	chr9	+	5077	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_17	132.54375184763	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	953	False	NA	14	True	AATAAA	-19	NA	103182413	103227627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
m54284U_201203_174622/11274618/ccs	chr9	+	3926	19	NIC	ENSMUSG00000032512.8	novel	2924	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	66.449646767726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTGCTGGACATGTT	NA	False	NA	30	True	AATAAA	-18	NA	119724222	119755653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_119724383_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
m54284U_201203_174622/112789405/ccs	chr12	+	1391	9	NNC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_1	947.891607727381	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGACAGCCTTGTG	NA	False	NA	17	True	AGTAAA	-35	NA	87313471	87320772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_87313696_87314933_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
m54284U_201203_174622/112854026/ccs	chr6	+	5012	25	NIC	ENSMUSG00000029920.10	novel	5168	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	117.678226238143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTTTGTAATGGTTTTT	1739	False	NA	28	True	AATAAA	-30	NA	65019604	65093045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_65019715_65020189_65020430_65027026_65027114_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
m54284U_201203_174622/112918800/ccs	chr16	+	5479	33	NNC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_3	369.570378478088	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492981_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/112919473/ccs	chr10	-	1289	7	NNC	ENSMUSG00000019774.9	novel	2588	7	NA	NA	0	153	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	8.85061203156784	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGACAGTTGTTTTATGC	NA	False	NA	-2	True	TATAAA	-19	NA	5773910	5763058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768927_5768985_5770024_5770105_5773525
m54284U_201203_174622/112919514/ccs	chrX	+	5157	29	NIC	ENSMUSG00000034311.4	novel	4983	30	NA	NA	345	0	intron_retention	FALSE	canonical	3	204	junction_20	20.4419287000907	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGAGATCCTTCTAT	NA	False	NA	18	True	AATAAA	-22	NA	99669687	99770820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
m54284U_201203_174622/112920677/ccs	chr6	+	2427	20	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	54.5748107857386	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	173	False	NA	NA	False	AATAAA	-22	NA	49372537	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
m54284U_201203_174622/112920860/ccs	chr5	+	7689	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	0	intron_retention	FALSE	canonical	3	266	junction_8	70.2963050201055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887788	123959656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123958024_123959443
m54284U_201203_174622/112920863/ccs	chr16	-	6141	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_12	9.12724858139991	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTAGACACTCCTCTC	NA	False	NA	20	True	AATAAA	-36	NA	3821634	3796996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821595
m54284U_201203_174622/112986964/ccs	chr11	-	2727	5	NIC	ENSMUSG00000052298.13	novel	3069	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	267.149770727957	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGTTTGGATTTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	54678472	54608281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_54610551_54611068_54611184_54614399_54614502_54647231_54647386_54678385
m54284U_201203_174622/113180806/ccs	chr7	-	7419	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	335	junction_5	42.2073453322997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184867	80104839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_80105185_80108560_80108745_80110477_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336_80164439_80184790
m54284U_201203_174622/113181925/ccs	chr12	+	2042	15	NNC	ENSMUSG00000021262.16	novel	2180	14	NA	NA	239	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	61.4242938710004	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGGCTCTGGCTCACTCT	NA	False	NA	17	True	AATAAA	-17	NA	108521221	108654775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_108521473_108572169_108572271_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
m54284U_201203_174622/113379175/ccs	chr11	-	4501	23	NNC	ENSMUSG00000018849.7	novel	4531	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_16	56.5216991901238	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTCATTTGTCCC	8117	False	NA	NA	False	AATAAA	-18	NA	35871354	35729226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780116_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
m54284U_201203_174622/113380175/ccs	chr4	+	2060	4	Intergenic	novelGene_2339	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_2	238.174072663019	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACAAGTTTGCTTTGG	2312	False	NA	NA	False	NA	NA	NA	146289370	146319720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_146289526_146291416_146291510_146312913_146312972_146317966
m54284U_201203_174622/11338944/ccs	chr1	-	4175	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	0	-638	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	151.588991098372	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8591	False	NA	-15	True	AATAAA	-23	NA	88205355	88190830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88200450_88200488_88202749_88202820_88204940_88205008_88205095
m54284U_201203_174622/113443805/ccs	chr5	-	5548	14	NNC	ENSMUSG00000042121.17	novel	3164	14	NA	NA	-6026	0	at_least_one_novel_splicesite	FALSE	canonical	3	116	junction_13	82.9598177489967	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114110843	114077825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114110788
m54284U_201203_174622/113444214/ccs	chr7	+	1704	6	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	269.648215273159	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_138448245_138448340_138448434_138474602_138474781_138475848_138476014_138478184_138478447_138483937
m54284U_201203_174622/113444716/ccs	chr5	+	2070	17	NIC	ENSMUSG00000029148.16	novel	2203	18	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_3	127.361183622601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTGCTTGCGGC	NA	False	NA	33	True	AATAAA	-21	NA	31398238	31408910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31398347_31401106_31401336_31401509_31401633_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
m54284U_201203_174622/113508373/ccs	chr9	-	2667	12	NNC	ENSMUSG00000032577.17	novel	2816	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_11	44.9833761764433	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGATTCCTGGGTTT	NA	False	NA	-10	True	AATAAA	-16	NA	107166978	107132133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_107132548_107132586_107133535_107134260_107134342_107134613_107134700_107135528_107135654_107136012_107136089_107137243_107137368_107139076_107139157_107139621_107139687_107140823_107140964_107166318_107166596_107166727
m54284U_201203_174622/113509396/ccs	chr17	+	3790	21	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_12	101.79502689228	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCACCCACTTTGTTTC	NA	False	NA	17	True	AATAAA	-27	NA	66090410	66148851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
m54284U_201203_174622/113509992/ccs	chr17	+	2526	18	NNC	ENSMUSG00000015461.16	novel	2566	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_9	89.1133176972076	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCGGCCACCTTCCTAGTG	9796	False	NA	11	True	AATAAA	-24	NA	34866174	34874048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870109_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
m54284U_201203_174622/113641621/ccs	chr3	+	4111	10	NIC	ENSMUSG00000005774.13	novel	4333	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_2	10.6666666666667	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCTTATGTTTCTTT	NA	False	NA	4	True	NA	NA	NA	94861418	94868660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_94861563_94862325_94862448_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
m54284U_201203_174622/113642059/ccs	chr6	-	2497	19	NIC	ENSMUSG00000029687.17	novel	2775	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_11	260.155040431141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
m54284U_201203_174622/113705235/ccs	chr16	+	2886	1	Intergenic	novelGene_8267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGCAAGCACTAATTGG	NA	False	NA	NA	False	NA	NA	NA	46298845	46301731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_46298800_46301700
m54284U_201203_174622/113706119/ccs	chr18	-	2819	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	0	-225	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_15	1527.29290612304	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTCCTTTGTGAAT	199	False	NA	-17	True	AATAAA	-13	NA	35087410	35070691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085532_35085729_35085789_35087222
m54284U_201203_174622/113771160/ccs	chr13	-	3245	11	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	186	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	404.668123281288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626376	111562213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
m54284U_201203_174622/113772697/ccs	chrX	-	163	1	Intergenic	novelGene_9698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTCTCCAGTTTCTTGAA	NA	False	NA	NA	False	NA	NA	NA	158165062	158164899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_158164900_158165100
m54284U_201203_174622/113901781/ccs	chr11	-	184	1	Intergenic	novelGene_5734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGAATCTCAGGCTGGA	5938	False	NA	NA	False	NA	NA	NA	23063287	23063103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23063100_23063300
m54284U_201203_174622/113904176/ccs	chr12	+	2428	16	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	52	junction_13	31.1312633144811	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGTTCATAACTATTTT	NA	False	NA	NA	False	ATTAAA	-33	NA	111725282	111773160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111761981_111762113_111772441_111772509_111772748
m54284U_201203_174622/113904282/ccs	chr1	+	3094	3	NIC	ENSMUSG00000038323.4	novel	541	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTTGGATGTGTTTAT	NA	False	NA	8	True	ATTAAA	-19	NA	57416798	57424582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_57417106_57418865_57418972_57421901
m54284U_201203_174622/113969229/ccs	chr7	-	2931	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	218	0	at_least_one_novel_splicesite	FALSE	canonical	3	387	junction_1	162.349006772447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126625978	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
m54284U_201203_174622/114032922/ccs	chr18	-	5847	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	0	0	intron_retention	FALSE	canonical	1	536	junction_19	330.110257674951	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCATGTTATTTATT	NA	False	NA	-8	True	AATAAA	-18	NA	42395194	42335411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
m54284U_201203_174622/114033028/ccs	chr2	+	2688	11	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	433	junction_10	618.436253788537	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119545_130119768_130119891_130120075_130120211_130120332
m54284U_201203_174622/11405654/ccs	chrX	+	2556	8	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	57.513796037941	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCTGTCTTTTTATTC	NA	False	NA	12	True	AATAAA	-18	NA	55777146	55838706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55836598_55836799_55837203
m54284U_201203_174622/114098470/ccs	chr12	-	3558	18	NIC	ENSMUSG00000020986.14	novel	4109	20	NA	NA	0	-406	combination_of_known_splicesites	FALSE	canonical	1	11	junction_16	156.113103351584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	2678	False	NA	-9	True	AATAAA	-18	NA	59058803	59005574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59053775_59054022_59058631
m54284U_201203_174622/114100539/ccs	chr8	+	3081	19	NNC	ENSMUSG00000010936.12	novel	3069	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	107.074293464807	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTGCCTGCTCCTTC	7347	False	NA	16	True	AATAAA	-20	NA	111345216	111447030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446440
m54284U_201203_174622/114164411/ccs	chr13	+	3451	11	NIC	ENSMUSG00000001542.8	novel	4382	12	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	126.162434979672	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATAATTTTGACGTGTA	6219	False	NA	NA	False	AATAAA	-29	NA	75855642	75920483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_75855917_75873071_75873120_75894410_75894533_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
m54284U_201203_174622/114166300/ccs	chr9	+	187	1	Intergenic	novelGene_4853	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTGTTAATTATAAAG	6140	False	NA	NA	False	NA	NA	NA	63099576	63099763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_63099600_63099800
m54284U_201203_174622/114166421/ccs	chr12	+	3827	7	NIC	ENSMUSG00000021072.13	novel	2795	8	NA	NA	0	-405	intron_retention	FALSE	canonical	3	450	junction_6	46.4746047738858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGTTTGATTTCTGTTA	NA	False	NA	23	True	AATAAA	-29	NA	70499868	70514409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70507165_70507252_70507355_70511173_70511241_70512751
m54284U_201203_174622/114297412/ccs	chr10	-	177	1	Intergenic	novelGene_5272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTTTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	40286329	40286152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_40286200_40286300
m54284U_201203_174622/114361920/ccs	chr13	-	5829	36	NNC	ENSMUSG00000021676.11	novel	5847	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	13.7245199908628	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTAGAGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	96028503	95763681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_95764629_95765472_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361_95821530_95826208_95826300_95844385_95844550_95852564_95852690_95858020_95858182_95861053_95861218_95865970_95866059_95867787_95867967_95869398_95869513_95870391_95870460_95882945_95883023_95886500_95886579_95899753_95899911_95974331_95974432_96028171
m54284U_201203_174622/114362400/ccs	chr1	+	186	1	Intergenic	novelGene_260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATACATTCACTATTTC	NA	False	NA	NA	False	NA	NA	NA	102020974	102021160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_102021000_102021200
m54284U_201203_174622/114362927/ccs	chr11	+	182	1	Intergenic	novelGene_5829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGAGGAGGAAAGTTT	3720	False	NA	NA	False	NA	NA	NA	53204380	53204562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53204400_53204600
m54284U_201203_174622/114425899/ccs	chr3	+	3078	12	NIC	ENSMUSG00000032657.16	novel	3083	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	7.00649049745371	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGGAGTATTCTGTT	1723	False	NA	7	True	AATAAA	-18	NA	89090509	89096596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092743_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
m54284U_201203_174622/114426152/ccs	chr8	-	3557	26	NIC	ENSMUSG00000070000.14	novel	3188	28	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_15	37.3892818866584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAAAGAGGAATCC	NA	False	NA	-15	True	AATAAA	-10	NA	72178348	72161296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_72161476_72161569_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166236_72166618_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930_72171023_72173895_72173949_72174462_72174504_72178276
m54284U_201203_174622/114623595/ccs	chr14	-	4263	18	NIC	ENSMUSG00000022185.20	novel	4383	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	59	junction_15	155.382305619572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGTGCCTTTCCTTGG	2945	False	NA	-1	True	AATAAA	-24	NA	54924073	54879618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
m54284U_201203_174622/114689667/ccs	chr6	+	1457	5	NIC	ENSMUSG00000020440.14	novel	1116	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1725	junction_3	146.308748883995	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGGTGTTGTCTGTTGCCT	-31	True	NA	17	True	AATAAA	-17	NA	28423558	28426601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_28423755_28424288_28424370_28424720_28425244_28425737_28425864_28426070
m54284U_201203_174622/114690534/ccs	chr8	+	4753	8	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	417.688439692866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024348	106032002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106030865_106031064
m54284U_201203_174622/114690541/ccs	chr4	+	4003	5	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	171.762918000365	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145397254	145431011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_145397419_145399301_145399395_145422723_145422806_145425813_145425941_145427474
m54284U_201203_174622/11471000/ccs	chr7	+	2418	19	NIC	ENSMUSG00000040811.16	novel	596	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	34.4726139291918	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18915256	18940407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_18915474_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
m54284U_201203_174622/114753548/ccs	chr4	+	2374	5	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	141	junction_3	314.200075588788	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650936	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134654130_134654241
m54284U_201203_174622/114755466/ccs	chr17	+	5962	33	NIC	ENSMUSG00000001870.17	novel	6671	34	NA	NA	-98	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_24	6.24468524026632	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGTGTGGAAGAAGAAG	NA	False	NA	NA	False	AATAAA	-27	NA	75312714	75698331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
m54284U_201203_174622/114756188/ccschrUn	chrUn_JH584304v1	-	3186	4	Intergenic	novelGene_9772	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_2	279.385436668095	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54868_55111_55702_58563_58836_59591
m54284U_201203_174622/114819948/ccs	chr1	+	3564	14	NIC	ENSMUSG00000026439.15	novel	716	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	98.5986425245921	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405379	132433397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_132405593_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
m54284U_201203_174622/114885882/ccs	chr19	-	3185	7	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	30.998655884839	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218421	7203037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207649_7211468_7211522_7212427_7212524_7218302
m54284U_201203_174622/115147740/ccs	chr10	-	3930	6	NIC	ENSMUSG00000025358.17	novel	2406	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1013	junction_1	108.654314226357	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTAGAGTGAATCTCTTT	8247	False	NA	-21	True	ATTAAA	-15	NA	128540900	128533812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_128535080_128535340_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
m54284U_201203_174622/115148474/ccs	chr2	-	914	5	NNC	ENSMUSG00000027131.4	novel	983	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	352.791014624806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAAGTTCCCCTTCAGT	5004	False	NA	-5	True	AATAAA	-29	NA	112198365	112193355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_112193700_112194136_112194298_112194496_112194581_112197738_112197862_112198163
m54284U_201203_174622/115279972/ccs	chr6	+	2176	15	NIC	ENSMUSG00000029916.12	novel	2531	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	142.276480624085	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTGTAATCTAAATGCA	NA	False	NA	8	True	NA	NA	NA	40302420	40373696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_40302465_40306426_40306534_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
m54284U_201203_174622/115280570/ccs	chr1	-	6567	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	291.903344205366	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816744_84816835_84816949
m54284U_201203_174622/115344978/ccs	chr15	+	5472	4	NNC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	71.0414589439778	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGATGATGGCTT	NA	False	NA	35	True	ATTAAA	-22	NA	88635862	88668719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_88636006_88638962_88639137_88654740_88654788_88663611
m54284U_201203_174622/115345821/ccs	chr8	-	178	1	Intergenic	novelGene_4306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATTTGTCACTTTAAT	NA	False	NA	NA	False	NA	NA	NA	65484395	65484217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_65484200_65484400
m54284U_201203_174622/11535006/ccs	chr3	-	4242	14	NIC	ENSMUSG00000008763.17	novel	7969	13	NA	NA	0	-3229	combination_of_known_junctions	FALSE	canonical	3	11	junction_13	34.4558717868481	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTGTCATGTTTGATT	NA	False	NA	-1	True	ATTAAA	-17	NA	100592775	100472752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876_100592004_100592457
m54284U_201203_174622/11535712/ccs	chr7	+	1770	9	NNC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	163.041980790225	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	3125	False	NA	25	True	NA	NA	NA	44711919	44727634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_44711956_44722917_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
m54284U_201203_174622/115410824/ccs	chr6	-	2164	9	NIC	ENSMUSG00000025823.10	novel	2399	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	300	junction_8	490.098826131016	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTGCCTTTTATTTT	8956	False	NA	23	True	TTTAAA	-24	NA	47790298	47773074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47790150
m54284U_201203_174622/115540218/ccs	chr10	+	2131	15	NNC	ENSMUSG00000058799.17	novel	1486	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	113	junction_6	584.902032613242	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGATGCTGTCTCGGTTTG	NA	False	NA	23	True	AATAAA	-25	NA	111309083	111332745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326872_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
m54284U_201203_174622/115541226/ccs	chr13	+	183	1	Intergenic	novelGene_7218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTTATTGTCAC	NA	False	NA	NA	False	NA	NA	NA	81615487	81615670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_81615500_81615700
m54284U_201203_174622/115671377/ccs	chr17	-	4072	1	Intergenic	novelGene_8591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCTGCACAGAAAAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	38313571	38309499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_38309500_38313600
m54284U_201203_174622/115672418/ccs	chr4	+	2216	9	NNC	ENSMUSG00000028576.13	novel	1713	14	NA	NA	0	-24830	intron_retention	FALSE	canonical	3	12	junction_8	62.4234531246069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTATTGTTGTAATCTG	NA	False	NA	NA	False	NA	NA	NA	94502727	94528105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94526652
m54284U_201203_174622/115672554/ccs	chr11	-	1944	6	NIC	ENSMUSG00000009894.16	novel	1896	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	132.4259793243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGAGGAGCCGGGTCT	NA	False	NA	-7	True	NA	NA	NA	59340833	59297969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59333617_59333668_59340740
m54284U_201203_174622/115673608/ccs	chr2	+	5619	18	NNC	ENSMUSG00000036617.18	novel	5931	19	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	52.6070501939028	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4625	False	NA	33	True	AATAAA	-25	NA	20524430	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
m54284U_201203_174622/115673761/ccs	chr7	+	4039	7	NIC	ENSMUSG00000066979.7	novel	2128	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1325	junction_5	32.3367695768558	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTTTTAAAAGTTGGGT	NA	False	NA	16	True	AATAAA	-11	NA	131162108	131172893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131168081_131169912_131170091_131170233_131170451_131172607
m54284U_201203_174622/115737957/ccs	chr10	+	667	7	NIC	ENSMUSG00000020153.15	novel	983	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	164	junction_2	752.472295540212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGTTCTGTGTGGAC	9700	False	NA	24	True	AATAAA	-15	NA	80085293	80092627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80085326_80088230_80088268_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
m54284U_201203_174622/115738703/ccs	chr2	-	3368	1	Antisense	novelGene_ENSMUSG00000085491.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30697557	30694189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_30694200_30697600
m54284U_201203_174622/115739194/ccs	chr12	-	3703	14	NIC	ENSMUSG00000021179.9	novel	3718	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_12	19.2473774437334	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGCAGCTTCTTATT	8556	False	NA	-5	True	GATAAA	-15	NA	100125907	100091710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484_100117594_100125798
m54284U_201203_174622/115804108/ccs	chr1	-	3074	24	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	36.7126480319773	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126882	183107681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
m54284U_201203_174622/115804504/ccs	chr4	+	2486	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	0	-176	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	574.293597215282	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTTCGAG	NA	False	NA	29	True	GATAAA	-24	NA	156320466	156331884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325879_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
m54284U_201203_174622/115804696/ccs	chr12	-	176	1	Intergenic	novelGene_6650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTTAAAAAAAAGAAAATA	9221	False	NA	NA	False	NA	NA	NA	54989910	54989734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_54989700_54989900
m54284U_201203_174622/115867774/ccs	chr2	+	5609	43	NIC	ENSMUSG00000052533.15	novel	5710	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	192.756577248514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATGTGGCAACTTTC	4875	False	NA	18	True	ATTAAA	-19	NA	30176435	30234278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_30176483_30186659_30186715_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
m54284U_201203_174622/115867906/ccs	chr14	+	4456	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	187.609374765762	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
m54284U_201203_174622/115935456/ccs	chr5	-	4980	25	NNC	ENSMUSG00000066621.13	novel	5106	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_22	17.5315192344151	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGACAAGATTTTTATT	NA	False	NA	-6	True	AATAAA	-17	NA	144160424	144131259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154160_144154227_144155331_144155567_144160312
m54284U_201203_174622/11599990/ccs	chr7	+	3678	17	NNC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	110.212560961762	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	103	False	NA	20	True	ATTAAA	-20	NA	4140058	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146257_4146309_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
m54284U_201203_174622/116001076/ccs	chr11	+	2268	7	NNC	ENSMUSG00000018347.17	novel	2270	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_5	10.077477638554	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTTGTAGCTGCCTTG	NA	False	NA	15	True	AATAAA	-21	NA	65698000	65720065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713653_65713765_65718867
m54284U_201203_174622/11601084/ccs	chr12	-	171	1	Intergenic	novelGene_6710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAGAATCTTTGA	NA	False	NA	NA	False	NA	NA	NA	72578681	72578510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_72578500_72578700
m54284U_201203_174622/11602336/ccs	chr14	-	3764	19	NNC	ENSMUSG00000035161.8	novel	4993	19	NA	NA	0	-1258	intron_retention	FALSE	canonical	3	4	junction_1	115.455258289377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGTGTGTGTGTGTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	62998587	62915036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_62915617_62930980_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
m54284U_201203_174622/116065865/ccs	chr11	+	1847	9	NIC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_1	172.34322586049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70538779_70538840_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
m54284U_201203_174622/116067059/ccs	chr7	+	2713	4	NNC	ENSMUSG00000068566.14	novel	2813	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	388.881301513285	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAACCCTCAATATA	271	False	NA	-13	True	TTTAAA	-10	NA	3339099	3347838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3339156_3341727_3341816_3345237_3346692_3346723
m54284U_201203_174622/116131521/ccs	chr11	-	5211	9	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	486	junction_1	48.9539005085397	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100240446_100242035_100242128_100242243_100242732_100243010_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201203_174622/116131693/ccs	chr10	-	189	1	Intergenic	novelGene_5354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTATGCTGTTCAGAG	NA	False	NA	NA	False	NA	NA	NA	62737218	62737029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62737000_62737200
m54284U_201203_174622/116132129/ccs	chr5	-	2125	15	NNC	ENSMUSG00000029703.11	novel	2473	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	96.2418562682536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGTGGGAAATGAGTG	6757	False	NA	-11	True	ATTAAA	-19	NA	136164855	136151920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_136152170_136152256_136152387_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
m54284U_201203_174622/116195631/ccs	chr6	+	6100	14	NIC	ENSMUSG00000030096.9	novel	6186	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	99.8156288529688	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGGTGTGTTTCGGAGT	NA	False	NA	31	True	AATAAA	-25	NA	91661075	91736047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_91661290_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
m54284U_201203_174622/116196305/ccs	chr18	+	2853	1	Genic_Genomic	ENSMUSG00000110277.3	novel	NA	NA	NA	NA	6602	2333	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGATCCAAGTGGTTT	NA	False	NA	NA	False	AATAAA	-28	NA	90610132	90612985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr18_+_90610100_90613000
m54284U_201203_174622/116197365/ccs	chr6	-	227	1	Genic_Genomic	ENSMUSG00000001521.13	novel	NA	NA	NA	NA	-6319	56	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	128308829	128308602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr6_-_128308600_128308800
m54284U_201203_174622/116197631/ccs	chr17	+	173	1	Intergenic	novelGene_8685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAATGGAGATGATA	NA	False	NA	NA	False	NA	NA	NA	66762361	66762534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_66762400_66762500
m54284U_201203_174622/116263364/ccs	chr11	-	2494	8	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_3	80.0122439609931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385014	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61380097_61380189_61380324_61380674_61380755_61381171_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
m54284U_201203_174622/116328141/ccs	chr13	+	1901	1	FSM	ENSMUSG00000012429.10	ENSMUST00000222292.2	4316	1	0	2415	0	77	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGATTTTTGTGAAT	NA	False	NA	16	True	AATAAA	-17	NA	17870017	17871918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_17870000_17871900
m54284U_201203_174622/116393833/ccs	chr1	+	4165	8	NNC	ENSMUSG00000001138.14	novel	5193	8	NA	NA	0	-1025	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	25.5957585772107	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGATACGGTGTGAAGAC	NA	False	NA	24	True	NA	NA	NA	36550947	36566293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_36552235_36558032_36558177_36559161_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
m54284U_201203_174622/116394372/ccs	chr1	-	5026	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	13.5502759132153	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTCTCATGTTGACT	NA	False	NA	-3	True	ATTAAA	-25	NA	24139414	24050761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069022_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
m54284U_201203_174622/116524168/ccs	chr1	-	8164	46	NNC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	0	intron_retention	FALSE	canonical	1	46	junction_22	466.000400572074	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692359	71624681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653018_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
m54284U_201203_174622/116525233/ccs	chr2	+	4034	6	NNC	ENSMUSG00000027439.10	novel	4232	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	26.4423902096615	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTGCTTTGTAAAAG	559	False	NA	NA	False	AATAAA	-18	NA	148523130	148534869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_148523136_148525523_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
m54284U_201203_174622/116525342/ccs	chr11	+	9104	54	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_49	39.579158530227	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	12	True	AATAAA	-20	NA	84070656	84292477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_84070753_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
m54284U_201203_174622/116525898/ccs	chr4	+	190	1	Intergenic	novelGene_2429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATTTCCAAACTTACCA	1150	False	NA	NA	False	NA	NA	NA	155523757	155523947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_155523800_155523900
m54284U_201203_174622/116589906/ccs	chr10	+	2643	8	NIC	ENSMUSG00000020088.11	novel	2613	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	573.138691054507	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTCTCCTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	61516108	61529076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_61516193_61517877_61517928_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
m54284U_201203_174622/116590632/ccs	chr1	-	6531	13	NIC	ENSMUSG00000048402.15	novel	6637	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_11	30.4743744808651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCTTGTTGATCTGCTT	1229	False	NA	-3	True	ATTAAA	-17	NA	118981349	118761861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776248_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708_118795912_118929769_118929937_118981031
m54284U_201203_174622/116654587/ccs	chr18	-	3421	3	NIC	ENSMUSG00000024538.9	novel	1403	5	NA	NA	84	0	intron_retention	FALSE	canonical	3	375	junction_2	10	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTTGCAAGACTTTG	NA	False	NA	-11	True	ATTAAA	-20	NA	53551103	53539403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_53540138_53542196_53544692_53550911
m54284U_201203_174622/116655740/ccs	chr5	-	1575	5	NNC	ENSMUSG00000029213.12	novel	3895	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	141.390416931276	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTTGCTTGATTTC	NA	False	NA	-4	True	AATACA	-14	NA	72325532	72316353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325305
m54284U_201203_174622/116656145/ccs	chr15	-	8242	53	NNC	ENSMUSG00000037487.8	novel	9242	59	NA	NA	-26553	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_21	200.420426262678	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATGGTGTTATTT	NA	False	NA	-5	True	AATAAA	-31	NA	38041850	37968102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986115_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691
m54284U_201203_174622/116719642/ccs	chr1	-	4137	27	NIC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_26	27.7003460555574	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6554	False	NA	NA	False	AAGAAA	-10	NA	92108063	91860478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
m54284U_201203_174622/116721881/ccs	chr16	+	2856	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	356.449208724048	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	NA	False	NA	11	True	AATAAA	-16	NA	48251662	48451263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48412876_48412979_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
m54284U_201203_174622/116786061/ccs	chr9	+	1805	7	NIC	ENSMUSG00000038884.15	novel	1683	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_5	14.0118997046558	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	False	NA	19	True	AATAAA	-28	NA	20779953	20785603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784561_20784837
m54284U_201203_174622/116786781/ccs	chr7	+	1394	7	NNC	ENSMUSG00000033685.14	novel	464	4	NA	NA	469	325	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	172.435897912496	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTTTCTCATATGTT	NA	False	NA	15	True	CATAAA	-17	NA	100145754	100148834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_100145845_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
m54284U_201203_174622/116851096/ccs	chr4	-	240	1	Intergenic	novelGene_2079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGTTTCCATTTACTG	8631	False	NA	NA	False	NA	NA	NA	120971464	120971224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_120971200_120971500
m54284U_201203_174622/116917438/ccs	chr7	+	2424	15	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	160.587140182011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428093	49508013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_49428250_49428328_49428462_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
m54284U_201203_174622/116918868/ccs	chr9	+	1875	8	ISM	ENSMUSG00000032387.16	ENSMUST00000169003.8	1803	9	911	0	0	0	3prime_fragment	FALSE	canonical	3	8	junction_5	575.471093619685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATTTTTGCTTCTA	NA	False	NA	16	True	AATAAA	-16	NA	65537840	65567810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558942_65558987_65566416_65566487_65566719
m54284U_201203_174622/116919072/ccs	chr1	+	2189	13	NNC	ENSMUSG00000026353.10	novel	4113	13	NA	NA	142	573	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_6	101.309858848979	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATGATCTTATTTTTGC	236	False	NA	15	True	AATAAA	-18	NA	128172040	128205330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188567_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
m54284U_201203_174622/116982983/ccs	chr3	+	195	1	Intergenic	novelGene_1595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGCGCCACCACTGCCT	NA	False	NA	NA	False	NA	NA	NA	100066099	100066294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_100066100_100066300
m54284U_201203_174622/117047315/ccs	chr10	-	4136	20	NNC	ENSMUSG00000020092.10	novel	4282	20	NA	NA	149	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_14	71.6844810258441	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGCTGATTGGTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	61219160	61155434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184166_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
m54284U_201203_174622/117049045/ccs	chr9	+	2750	14	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	142.640401091937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201203_174622/117049843/ccs	chr16	+	3106	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	116.696655371951	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2202	False	NA	22	True	AATAAA	-22	NA	21828233	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855224_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
m54284U_201203_174622/117181012/ccs	chr11	+	2024	9	NIC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1103	junction_5	71.9790551132758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823998	4844200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
m54284U_201203_174622/117244160/ccs	chr10	-	169	1	Intergenic	novelGene_5223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAACATGGCTTATTAC	6954	False	NA	NA	False	NA	NA	NA	21146004	21145835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_21145800_21146000
m54284U_201203_174622/11731004/ccs	chr14	-	4136	21	Fusion	ENSMUSG00000091509.8_ENSMUSG00000022119.16	novel	3633	22	NA	NA	0	447	multi-exon	FALSE	canonical	3	7	junction_14	49.9634616494894	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	105414763	105351953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388356_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
m54284U_201203_174622/11731728/ccs	chr10	-	4705	12	NIC	ENSMUSG00000048661.15	novel	4743	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_11	37.9301227901523	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCGTCTTTGTTTTAAAG	NA	False	NA	-1	True	ATTAAA	-24	NA	120815237	120759317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_120761462_120761671_120761751_120761839_120761946_120763850_120763933_120766946_120767126_120767625_120767729_120767832_120767935_120769299_120769446_120769534_120769615_120783108_120783177_120785201_120785269_120813688
m54284U_201203_174622/117442805/ccs	chr8	-	1410	17	NNC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_16	399.150112739556	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060839
m54284U_201203_174622/117443195/ccs	chr6	+	3516	11	NIC	ENSMUSG00000029863.14	novel	3529	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	35.1573605380154	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTGGTGTTTTTG	NA	False	NA	13	True	AATAAA	-20	NA	42241989	42259442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246155_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
m54284U_201203_174622/117507269/ccs	chr10	-	4445	1	Antisense	novelGene_ENSMUSG00000009291.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGGTGCAGGCTGACC	NA	False	NA	NA	False	ACTAAA	-21	NA	77431593	77427148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_-_77427100_77431600
m54284U_201203_174622/117637251/ccs	chr12	+	2739	19	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_3	92.1761598486531	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9323	False	NA	24	True	ATTAAA	-41	NA	113061897	113100826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
m54284U_201203_174622/117639325/ccs	chr13	-	3487	4	NIC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18642	3076	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	25.3508711224421	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGCCTTGGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	74739511	74724400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74727579_74728971_74729033_74729232_74729360_74739390
m54284U_201203_174622/117702869/ccs	chr7	+	2003	10	NIC	ENSMUSG00000006024.14	novel	2517	11	NA	NA	0	391	intron_retention	FALSE	canonical	3	1130	junction_7	69.2495933045062	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGAGCTGTCCCTTTGA	NA	False	NA	32	True	AATAAA	-22	NA	15832532	15851055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
m54284U_201203_174622/117769229/ccs	chr11	-	4069	22	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_20	73.6035836650952	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGTTGGCCTGGTTCTT	NA	False	NA	-2	True	AATAAA	-13	NA	97171396	97096669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97158420_97158506_97171026
m54284U_201203_174622/117836180/ccs	chr16	+	3810	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	827	junction_1	52.5660299052535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4389	False	NA	21	True	AATAAA	-29	NA	93680811	93703003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
m54284U_201203_174622/117836192/ccs	chr11	-	1871	12	NIC	ENSMUSG00000000278.11	novel	2097	13	NA	NA	77	0	combination_of_known_splicesites	FALSE	canonical	2	32	junction_11	738.984863240901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGCTGAAAATTCTGTT	5278	False	NA	-9	True	AATAAA	-20	NA	88846214	88814845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88846119
m54284U_201203_174622/117900344/ccs	chr5	+	1593	8	NIC	ENSMUSG00000040274.12	novel	2470	7	NA	NA	0	-1160	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	16.8861735494711	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATTGTGCTGCCATTTCG	NA	False	NA	15	True	NA	NA	NA	3391484	3571065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_3391575_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
m54284U_201203_174622/117901405/ccs	chr5	+	2057	5	NIC	ENSMUSG00000053856.8	novel	1565	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_4	4.32290411644765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGTGTGTGTGGGACCC	NA	False	NA	5	True	AATAAA	-17	NA	31265662	31269870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31265766_31266230_31267053_31267521_31267664_31268456_31268524_31268947
m54284U_201203_174622/117901492/ccs	chr18	+	3427	13	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	0	-760	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	149.779907976115	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGGCATTTTTTAATGA	NA	False	NA	NA	False	AATAAA	-18	NA	24339015	24419107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24339409_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
m54284U_201203_174622/117901494/ccs	chr7	-	2667	9	Fusion	ENSMUSG00000000486.14_ENSMUSG00000042492.13	novel	3614	9	NA	NA	0	-105	multi-exon	FALSE	canonical	1	2	junction_8	130.410829209081	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTACGTCTCTGTTTTC	NA	False	NA	-3	True	NA	NA	NA	126814297	126796735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126814120
m54284U_201203_174622/117966289/ccs	chr6	+	1549	7	NIC	ENSMUSG00000030282.15	novel	1760	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_1	274.564301313109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGTACTGTAAGACCT	NA	False	NA	33	True	AATAAA	-22	NA	142702479	142721440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_142702753_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
m54284U_201203_174622/11797231/ccs	chr13	+	2503	5	NNC	ENSMUSG00000058258.15	novel	3027	5	NA	NA	0	-74	intron_retention	FALSE	canonical	2	20	junction_1	254.999019605958	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTGTTAATATCTGGAT	NA	False	NA	1	True	AATAAA	-17	NA	8935978	8942413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_8936033_8936775_8936941_8937520_8937614_8937958_8938090_8940353
m54284U_201203_174622/11797349/ccs	chr15	+	3186	20	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_19	47.7117383072465	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775629	57833463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57833119
m54284U_201203_174622/118031278/ccs	chr9	-	4068	24	NIC	ENSMUSG00000032480.18	novel	4441	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	182.775513865531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946499	109913390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
m54284U_201203_174622/1180795/ccs	chr10	+	1968	11	NIC	ENSMUSG00000004931.12	novel	2268	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	59.7863696840676	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGGTCAGAAGCTTGA	1369	False	NA	18	True	TATAAA	-21	NA	81104054	81109070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81104154_81104691_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
m54284U_201203_174622/118096176/ccs	chr11	+	3903	23	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	97.1731967431825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5272	False	NA	21	True	AATAAA	-21	NA	68906922	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68906992_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
m54284U_201203_174622/118097338/ccs	chr4	+	4959	30	NNC	ENSMUSG00000039577.18	novel	4583	29	NA	NA	-416	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_6	8.66361725675035	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCTTCTGATGTTTT	NA	False	NA	NA	False	AATGAA	-19	NA	152562182	152647640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_152562377_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583581_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
m54284U_201203_174622/118098675/ccs	chr13	+	3092	15	NIC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_14	125.434937196093	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
m54284U_201203_174622/1181114/ccs	chr8	+	4050	18	NIC	ENSMUSG00000031565.19	novel	5025	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	52.4816659369305	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26008810	26064801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
m54284U_201203_174622/1181569/ccs	chr4	-	198	1	Intergenic	novelGene_1765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGCCAAAGCTACACAG	NA	False	NA	NA	False	NA	NA	NA	21725181	21724983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_21725000_21725200
m54284U_201203_174622/118162419/ccs	chr17	+	2537	6	NNC	ENSMUSG00000061130.14	novel	2670	6	NA	NA	0	-79	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	587.897474054788	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCAGTTTCCACTTAT	NA	False	NA	23	True	AATAAA	-33	NA	85265426	85322040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_85265823_85301107_85301968_85310747_85310812_85312339_85312452_85312936_85312995_85320993
m54284U_201203_174622/1182021/ccs	chr5	-	174	1	Intergenic	novelGene_2848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATTCTCAGCCG	NA	False	NA	NA	False	NA	NA	NA	121356247	121356073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121356100_121356200
m54284U_201203_174622/118227134/ccs	chr11	+	5035	1	NIC	ENSMUSG00000018379.18	novel	5362	4	NA	NA	-5	-923	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATACTGACAGTTGATAC	6675	False	NA	NA	False	TTTAAA	-21	NA	87938623	87943658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87938600_87943700
m54284U_201203_174622/118227148/ccs	chr6	+	2658	1	Intergenic	novelGene_3166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATACTGTGCCAATATCC	NA	False	NA	NA	False	NA	NA	NA	35016551	35019209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_35016600_35019200
m54284U_201203_174622/118227516/ccs	chr4	+	3516	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_22	341.310019619195	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	570	False	NA	8	True	AATAAA	-20	NA	137321517	137383642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366525_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201203_174622/118292921/ccs	chr17	+	3641	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	162.957624859962	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8820	False	NA	32	True	AATAAA	-33	NA	35354485	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
m54284U_201203_174622/118294800/ccs	chr5	+	2723	4	NNC	ENSMUSG00000018143.11	novel	2849	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	16	junction_3	3.74165738677394	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTGTCTGGATGGTGC	NA	False	NA	16	True	AATAAA	-21	NA	139777288	139788408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_139777468_139784893_139784974_139785839_139787753_139787857
m54284U_201203_174622/118359246/ccs	chr5	-	3182	8	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1095	junction_1	123.795255588098	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650206	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24648142_24648274_24648455_24648892
m54284U_201203_174622/118359375/ccs	chr15	-	2220	4	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	-66	1627	at_least_one_novel_splicesite	FALSE	canonical	3	636	junction_3	2823.0568538377	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTAATTTCTTGTACC	89	False	NA	-6	True	ATTAAA	-19	NA	37007712	36999244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_37001168_37002082_37002191_37003929_37004067_37007660
m54284U_201203_174622/118491207/ccs	chr19	-	3485	31	NIC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_15	29.8713723971445	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACACTCACGTGTACTGC	NA	False	NA	-8	True	AATAAA	-16	NA	41969596	41932643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942454_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
m54284U_201203_174622/118621179/ccs	chr7	-	1403	10	NNC	ENSMUSG00000014402.16	novel	1949	10	NA	NA	0	212	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_2	371.517940679738	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTCTTTCTTGGACTT	NA	False	NA	-34	True	AATAAA	-14	NA	46569717	46539121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_46539453_46540669_46540789_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
m54284U_201203_174622/118621397/ccs	chr1	+	3443	5	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1740	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	44.3867942072865	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	136494421	136556051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_136494541_136551065_136551108_136552021_136552071_136552598_136552790_136553009
m54284U_201203_174622/118622927/ccs	chr9	+	5761	20	NNC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	86.1423803669881	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGAACGTTTTTGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	14695997	14748419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702026_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
m54284U_201203_174622/11863911/ccs	chr6	-	2825	18	NIC	ENSMUSG00000051586.18	novel	2875	18	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	13.1507101127881	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTATTTGTCCTTTAGTG	NA	False	NA	-5	True	AATAAA	-19	NA	121087108	120984200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
m54284U_201203_174622/118685994/ccs	chr4	+	170	1	Intergenic	novelGene_2153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAACCTTATTTTAT	9739	False	NA	3	True	NA	NA	NA	129345767	129345937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129345800_129345900
m54284U_201203_174622/118688539/ccs	chr17	+	1077	5	ISM	ENSMUSG00000073421.7	ENSMUST00000040828.7	1212	6	1481	9	1359	0	3prime_fragment	FALSE	canonical	3	50	junction_2	5.35607132140714	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGATTTGGCTTTGA	NA	False	NA	3	True	NA	NA	NA	34483663	34488384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_34484008_34486309_34486592_34486896_34487008_34487434_34487459_34488068
m54284U_201203_174622/118751446/ccs	chr18	+	7471	23	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	0	339	intron_retention	FALSE	canonical	3	208	junction_7	45.1085925735546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTAGACAAAATTCT	NA	False	NA	154	True	ATTAAA	-17	NA	34910099	34972052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
m54284U_201203_174622/118752842/ccs	chr11	+	3926	4	NNC	ENSMUSG00000046311.14	novel	4029	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	51.0751080925598	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAGTAGAGAGTCATT	1372	False	NA	31	True	AATAAA	-40	NA	49094324	49109636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_49094370_49103521_49103604_49104416_49104470_49105890
m54284U_201203_174622/118753490/ccs	chr4	+	4740	32	NIC	ENSMUSG00000053510.13	novel	3784	33	NA	NA	0	0	intron_retention	FALSE	canonical	1	40	junction_2	151.9148263472	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGACGTGTGTGCAT	9940	False	NA	39	True	AATAAA	-31	NA	108857851	108918358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108858362_108870706_108871038_108873848_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
m54284U_201203_174622/118884240/ccs	chr2	+	2368	6	NIC	ENSMUSG00000026811.19	novel	2394	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	41.0482642751189	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	3304	False	NA	7	True	AATAAA	-16	NA	32496972	32510818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32497124_32498053_32498109_32502235_32502416_32504792_32505200_32508508_32508617_32509351
m54284U_201203_174622/119014551/ccs	chr4	+	6972	11	NIC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	54	junction_1	20.2852162916741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTTTTTAAATGCTTA	NA	False	NA	17	True	ATTAAA	-21	NA	148123615	148144008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_148123867_148126040_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
m54284U_201203_174622/119080511/ccs	chr5	-	3049	9	NIC	ENSMUSG00000029127.16	novel	2978	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	16.9170771707172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTATATTTTGTAA	NA	False	NA	NA	False	AATAAA	-19	NA	38377798	38357592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38369189_38369433_38370651_38371728_38373790_38373958_38377666
m54284U_201203_174622/119080565/ccs	chr13	+	1026	6	NIC	ENSMUSG00000038286.12	novel	1253	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	72.3972375163583	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTGTTCCTGTTTGCTA	NA	False	NA	15	True	AATAAA	-17	NA	34221639	34258057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_34221753_34228406_34228511_34234263_34234418_34244416_34244549_34247892_34248017_34257658
m54284U_201203_174622/119144479/ccs	chr5	+	188	1	Intergenic	novelGene_2709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAACCGATCT	NA	False	NA	NA	False	NA	NA	NA	103881238	103881426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_103881200_103881400
m54284U_201203_174622/119212097/ccs	chr1	+	3070	10	NIC	ENSMUSG00000026687.15	novel	2835	11	NA	NA	0	-243	intron_retention	FALSE	canonical	3	593	junction_2	47.3085485449733	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTCTGTCCTTTCT	NA	False	NA	19	True	AATAAA	-16	NA	167177804	167195858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
m54284U_201203_174622/119275605/ccs	chr5	+	3031	17	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	81.0771237773023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283743	110319838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110283801_110283916_110284061_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
m54284U_201203_174622/119276390/ccs	chr11	-	3179	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_14	499.636990673208	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615208
m54284U_201203_174622/119276574/ccs	chr14	-	3677	18	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7205	intron_retention	FALSE	canonical	3	165	junction_3	83.8071604244429	235	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998587	62930457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
m54284U_201203_174622/119276581/ccs	chr11	+	2995	14	NIC	ENSMUSG00000018661.18	novel	3935	14	NA	NA	212	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	77.9692702325199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGCCTCTGCTCCTGT	NA	False	NA	14	True	AATAAA	-22	NA	113540365	113553226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551790_113551879_113551965_113552045_113553032
m54284U_201203_174622/11928134/ccs	chr17	-	2509	8	NIC	ENSMUSG00000055660.10	novel	2560	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	35.9500787657733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATAGTGAGTCTCT	NA	False	NA	NA	False	AATATA	-16	NA	95057447	95034512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056864
m54284U_201203_174622/11930077/ccs	chr12	-	2665	8	NIC	ENSMUSG00000041645.15	novel	2850	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	292.814282577938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGAGGGTGTTGCAGT	NA	False	NA	-13	True	ATTAAA	-19	NA	103392083	103374241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_103374737_103376186_103376317_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
m54284U_201203_174622/119473143/ccs	chr19	-	4276	2	ISM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	-144	22529	-144	-22529	5prime_fragment	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGCACAAGGCTCAGC	8088	False	NA	NA	False	AATAAA	-18	NA	12478962	12466230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_-_12469915_12478370
m54284U_201203_174622/119537766/ccs	chr10	-	3762	25	NNC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-2523	0	intron_retention	FALSE	canonical	3	239	junction_24	221.439792262417	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTCTTTTCCGGAGTTAT	9328	False	NA	NA	False	AATAAA	-21	NA	121464760	121425523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121464536
m54284U_201203_174622/119537909/ccs	chr19	-	9212	14	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	653	junction_5	74.4813228643349	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5476	False	NA	-12	True	AATAAA	-13	NA	45771990	45738697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
m54284U_201203_174622/119537925/ccs	chr11	+	2702	2	Antisense	novelGene_ENSMUSG00000082579.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	6727777	6741438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_6727932_6738890
m54284U_201203_174622/119540241/ccs	chr6	+	339	2	NIC	ENSMUSG00000098318.8	novel	496	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACTGTTTCTGGGCTCTG	8006	False	NA	24	True	NA	NA	NA	134906095	134928538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_134906165_134928268
m54284U_201203_174622/119604930/ccs	chr16	-	1913	10	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	413	junction_6	42.8808282580778	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831391	4826593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
m54284U_201203_174622/119605633/ccs	chr11	-	173	1	Intergenic	novelGene_6024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGTA	NA	False	NA	NA	False	NA	NA	NA	75946565	75946392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75946400_75946600
m54284U_201203_174622/119605874/ccs	chr13	+	5664	26	NIC	ENSMUSG00000021193.11	novel	3906	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	577	junction_1	114.372821946475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598194	6630078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
m54284U_201203_174622/119670319/ccs	chr13	-	4795	9	NIC	ENSMUSG00000038991.18	novel	2843	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	973	junction_5	105.814696521797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTCTGGTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	38712466	38684248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
m54284U_201203_174622/119799935/ccs	chr17	-	4573	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_3	389.553590665007	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTATGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	10538309	10425479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
m54284U_201203_174622/119802252/ccs	chr9	+	189	1	Intergenic	novelGene_4650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAACACAAACGAAAA	9339	False	NA	NA	False	NA	NA	NA	20907239	20907428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_20907200_20907400
m54284U_201203_174622/119867936/ccs	chr5	+	3844	21	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	12	junction_6	225.839295739249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/119932097/ccs	chr4	-	3863	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_7	237.221554913761	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126072167_126072351_126073704_126074608_126080227_126080382_126088109_126088198_126096362
m54284U_201203_174622/119932189/ccs	chr1	+	4960	20	NIC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	69	0	intron_retention	FALSE	canonical	3	464	junction_5	73.7845932765516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	391	False	NA	22	True	TATAAA	-28	NA	72346654	72434111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
m54284U_201203_174622/119997354/ccs	chr2	-	4207	28	NIC	ENSMUSG00000027185.16	novel	3879	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	271	junction_24	29.0992813585317	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTGCAGTGCCTATAA	NA	False	NA	-9	True	AATAAA	-20	NA	103591586	103551600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
m54284U_201203_174622/120064821/ccs	chr7	-	1393	11	NNC	ENSMUSG00000030603.17	novel	1440	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_1	682.629980296793	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCTTAGGTGTTTAAC	NA	False	NA	-4	True	AATAAA	-24	NA	27749481	27741131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_27741344_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
m54284U_201203_174622/120127743/ccs	chr17	-	3033	17	NNC	ENSMUSG00000072082.8	novel	4133	17	NA	NA	0	-1032	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_1	203.745235757183	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTGCTTCAACTGA	8737	False	NA	-4	True	AATAAA	-19	NA	24470321	24442203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_24443315_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
m54284U_201203_174622/120129834/ccs	chrX	+	4055	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_15	261.342494455617	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/120193262/ccs	chr17	+	2752	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	24.9886393940413	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTATTAGCTAACCACAG	NA	False	NA	4	True	AATAAA	-15	NA	64171009	64446192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
m54284U_201203_174622/120193344/ccs	chr8	-	2651	12	NIC	ENSMUSG00000036672.6	novel	1814	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	191	junction_9	18.3816293489087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTAGCGATATTGTAT	NA	False	NA	NA	False	ATTAAA	-16	NA	106578640	106571304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_106571628_106571705_106571811_106571891_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
m54284U_201203_174622/120194746/ccs	chr12	-	186	1	Intergenic	novelGene_6703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGTCCTTTTGCTGAT	NA	False	NA	NA	False	NA	NA	NA	71175492	71175306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71175300_71175500
m54284U_201203_174622/120326751/ccs	chr12	-	3234	14	NNC	ENSMUSG00000021051.11	novel	4810	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	53.6105836058162	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATCAAAGGTGCATC	NA	False	NA	-16	True	AATAAA	-14	NA	75643019	75499272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640104_75642408
m54284U_201203_174622/120389975/ccs	chr4	+	1145	8	ISM	ENSMUSG00000012123.18	ENSMUST00000121391.8	4761	20	13860	3	0	0	3prime_fragment	FALSE	canonical	3	103	junction_1	10.7532624380336	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGCTGGTGGTCTCGTC	NA	False	NA	14	True	NA	NA	NA	133809622	133819812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_133809759_133809885_133809999_133814796_133814927_133816103_133816244_133816582_133816707_133818388_133818548_133819360_133819521_133819629
m54284U_201203_174622/120455513/ccs	chr3	+	2508	14	NIC	ENSMUSG00000027865.11	novel	3008	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_12	27.3565110755164	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTCTTCTCAGAGTCA	NA	False	NA	22	True	AGTAAA	-33	NA	100069833	100113971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109326_100109434_100113087
m54284U_201203_174622/120457776/ccs	chr10	-	2994	11	NIC	ENSMUSG00000020184.16	novel	3099	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_9	136.92187553492	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGATTTGTCTTACACA	NA	False	NA	-19	True	AATAAA	-21	NA	117546663	117524799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545850_117545934_117546456
m54284U_201203_174622/120457823/ccs	chr13	-	4263	12	NNC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	56.6982734735021	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718933	55687131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55697774_55697821_55698036_55698221_55700774_55701042_55702029_55702262_55703795_55704039_55712332_55712394_55717517
m54284U_201203_174622/120523214/ccs	chr8	+	1238	3	NIC	ENSMUSG00000005699.17	novel	1273	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGATGTGGTCCTTCTGTGT	NA	False	NA	10	True	ATTAAA	-16	NA	106427785	106430124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106427919_106428805_106429029_106429242
m54284U_201203_174622/12060872/ccs	chr8	+	5393	20	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	63.6920830279809	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443037	3506601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_3443225_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
m54284U_201203_174622/12060991/ccs	chr8	+	1585	4	NNC	ENSMUSG00000031562.17	novel	799	6	NA	NA	25946	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	153.599045135921	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48589191	48594700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_48589240_48590292_48590410_48591816_48591914_48593377
m54284U_201203_174622/120654250/ccs	chr4	-	3194	14	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	684	junction_5	54.7744163491546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
m54284U_201203_174622/120719394/ccs	chr8	+	2123	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	161.765153366694	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415900	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417401_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201203_174622/120783857/ccs	chr4	+	7707	22	NIC	ENSMUSG00000039852.18	novel	7728	23	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_3	25.5941638755752	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150365997	150706423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_150366533_150490652_150491122_150515979_150516051_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
m54284U_201203_174622/120915923/ccs	chr11	-	461	5	NNC	ENSMUSG00000071415.7	novel	1059	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	613	junction_3	5440.57875482931	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCTGGTCTTCTTGAC	NA	False	NA	-35	True	ATTAAA	-11	NA	97673208	97668863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_97668991_97669090_97669205_97672159_97672257_97672631_97672716_97673169
m54284U_201203_174622/120982077/ccs	chr8	+	3756	15	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	573	junction_6	37.2581315600627	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	5159	False	NA	34	True	AATAAA	-25	NA	125589810	125616796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125614559_125616010
m54284U_201203_174622/121046996/ccs	chr17	+	1777	17	NNC	ENSMUSG00000038141.12	novel	4405	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	237.645407790157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAGACTTTTTGTTGCTG	NA	False	NA	38	True	AATAAA	-21	NA	6320744	6358589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6358271
m54284U_201203_174622/121110655/ccs	chrX	+	5171	5	NIC	ENSMUSG00000043384.16	novel	837	6	NA	NA	0	4386	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	13.3299474867683	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGATTGAGTGCCC	NA	False	NA	NA	False	ATTAAA	-11	NA	134643481	134667125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_134643728_134645247_134645325_134649404_134649532_134652693_134652767_134662477
m54284U_201203_174622/121177447/ccs	chr7	-	2457	11	NIC	ENSMUSG00000030894.6	novel	3558	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_9	92.6736208421792	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGAGTGATTTTTTTT	NA	False	NA	4	True	AATAAA	-30	NA	105401442	105395125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105399195_105399386_105399538_105401188_105401261_105401377
m54284U_201203_174622/12124267/ccs	chr12	+	2537	13	NIC	ENSMUSG00000042472.12	novel	2597	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_10	75.9171240381393	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTTTGGCTCTTGTTTT	1846	False	NA	11	True	AATAAA	-16	NA	84363888	84390497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84385824_84386028_84386875_84387004_84389768
m54284U_201203_174622/12124842/ccs	chr5	-	11516	64	NIC	ENSMUSG00000070733.14	novel	11340	63	NA	NA	0	131	combination_of_known_junctions	FALSE	canonical	3	23	junction_22	11.5600462231899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGTGGTATTTTAAG	NA	False	NA	0	True	AATAAA	-18	NA	73413962	73177533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_73179641_73179844_73180036_73181230_73181342_73184658_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73272598_73272644_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
m54284U_201203_174622/121374271/ccs	chr7	-	2775	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	272	junction_4	30.5955853637416	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATAGTCTTGGTTTG	NA	False	NA	-28	True	AATAAA	-17	NA	27055379	27041557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27041970_27042070_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
m54284U_201203_174622/121374543/ccs	chr9	+	1216	8	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	341.54600490913	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	10	True	NA	24	True	AATAAA	-32	NA	7184550	7207040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_7184883_7186776_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
m54284U_201203_174622/121440957/ccs	chr11	-	196	1	Intergenic	novelGene_5945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACTTGTTGACCTTGCA	6526	False	NA	NA	False	NA	NA	NA	69413814	69413618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_69413600_69413800
m54284U_201203_174622/121504832/ccs	chr11	-	1958	13	NIC	ENSMUSG00000020528.15	novel	1837	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_11	72.6714447970376	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTATGTGGATAGTTG	216	False	NA	-7	True	AATAAA	-22	NA	61652914	61620479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652305_61652401_61652779
m54284U_201203_174622/121505391/ccs	chr10	-	993	9	NIC	ENSMUSG00000038510.13	novel	1296	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_7	393.075374451262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTTCGGTTTCCTGAT	6566	False	NA	-4	True	ACTAAA	-18	NA	40123023	40099678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40120580_40120714_40122948
m54284U_201203_174622/121637054/ccs	chr11	-	1855	15	NNC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	382.031679421527	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806541_96806604_96806976_96807023_96807209
m54284U_201203_174622/121700535/ccs	chr11	-	2506	18	NIC	ENSMUSG00000018160.16	novel	8024	17	NA	NA	0	291	combination_of_known_junctions	FALSE	canonical	3	134	junction_1	37.2323667653306	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCAGCTGACCTTATTG	NA	False	NA	-11	True	AATGAA	-12	NA	98084102	98048287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_98048961_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
m54284U_201203_174622/121767317/ccs	chr7	+	2669	6	ISM	ENSMUSG00000070604.6	ENSMUST00000107977.4	3836	10	2865	0	302	0	3prime_fragment	TRUE	canonical	2	8	junction_2	1.62480768092719	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTAGTGCCTGCAAAGG	NA	False	NA	NA	False	NA	NA	NA	43115439	43121443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_43116045_43116850_43117130_43117377_43117675_43118079_43118194_43118383_43118539_43120224
m54284U_201203_174622/121768653/ccs	chr16	+	4471	9	NIC	ENSMUSG00000008976.17	novel	2202	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	198.991794742899	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84631812	84660667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654267_84654461_84657262
m54284U_201203_174622/12189777/ccs	chr10	+	2865	5	NIC	ENSMUSG00000019818.16	novel	2922	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	29	junction_4	708.003663479222	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATATTTTGATTATGA	NA	False	NA	20	True	AATAAA	-25	NA	41395409	41407044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41404667
m54284U_201203_174622/121899524/ccs	chr11	+	1879	16	NIC	ENSMUSG00000025142.19	novel	870	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	238.262376383683	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120564199	120600270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_120564441_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
m54284U_201203_174622/12190337/ccs	chr7	-	3084	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	198	junction_15	26.127763011785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9941	False	NA	-3	True	AATAAA	-17	NA	4504679	4484518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
m54284U_201203_174622/121963642/ccs	chr12	-	3073	4	Genic_Genomic	ENSMUSG00000112975.2	novel	126	1	NA	NA	-301	38555	multi-exon	FALSE	canonical	3	16	junction_2	4.08248290463863	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGGAGAGAAATCTAT	NA	False	NA	NA	False	NA	NA	NA	24302483	24263501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_-_24265960_24267293_24267355_24267554_24267682_24302056
m54284U_201203_174622/122095483/ccs	chr16	-	6315	16	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	13.6521874519149	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTAGACACTCCTCTC	NA	False	NA	20	True	AATAAA	-36	NA	3821634	3796996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3818816_3819543_3821421
m54284U_201203_174622/122095972/ccs	chr18	+	9943	17	NNC	ENSMUSG00000005871.16	novel	12811	16	NA	NA	0	-2619	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_11	14.6799182559032	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCATTCCTAAAATTTA	NA	False	NA	15	True	AATAAA	-26	NA	34353976	34452623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
m54284U_201203_174622/122096065/ccs	chr11	+	2428	3	NIC	ENSMUSG00000018379.18	novel	2948	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	275	junction_2	517.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCATGGTTGTCCTTTT	6602	False	NA	21	True	AATAAA	-15	NA	87938550	87942316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87938859_87939315_87940922_87941802
m54284U_201203_174622/122226469/ccs	chr3	-	3434	25	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_17	275.661426794215	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201203_174622/122292312/ccs	chr2	+	1188	4	NNC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	234.403261259072	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGGATGTATGT	NA	False	NA	27	True	AATAAA	-33	NA	30697968	30713045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_30698096_30709640_30709781_30710464_30710714_30712373
m54284U_201203_174622/122292451/ccs	chr2	+	4239	8	NIC	ENSMUSG00000000826.17	novel	3664	6	NA	NA	0	629	combination_of_known_junctions	FALSE	canonical	3	29	junction_7	79.3236717377555	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAACAGCTGTGGTTTCT	7071	False	NA	8	True	AATAAA	-9	NA	181162343	181194671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
m54284U_201203_174622/122357377/ccs	chr2	-	2848	19	NNC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	0	-496	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_18	205.625663719894	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTGCCTGGTTCCTGATG	NA	False	NA	1	True	AATAAA	-21	NA	37593360	37473663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37547624_37547752_37593203
m54284U_201203_174622/122421552/ccs	chr15	+	268	3	Intergenic	novelGene_7698	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	63	junction_1	14.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAAATCTTTGTCTTGC	NA	False	NA	4	True	NA	NA	NA	41210851	41215810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_41210883_41214473_41214592_41215691
m54284U_201203_174622/122423247/ccs	chr4	+	1790	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_4	376.334213166967	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650936	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653462_134654045_134654130_134654241
m54284U_201203_174622/122553667/ccs	chr4	-	10178	9	NNC	ENSMUSG00000039967.15	novel	9986	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_8	58.5062763727106	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATAATGTTTTGTTCAT	11	True	NA	5	True	AATAAA	-37	NA	34882930	34803112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34847810_34848033_34882757
m54284U_201203_174622/122554660/ccs	chr2	+	4045	12	NIC	ENSMUSG00000039157.13	novel	4223	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	37.9482030628919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGGTGTTTCTTTTC	1582	False	NA	23	True	ATTAAA	-23	NA	32425343	32459768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32425877_32426081_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
m54284U_201203_174622/122554775/ccs	chr2	+	2715	23	NIC	ENSMUSG00000027411.18	novel	3161	24	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_14	85.518025261509	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTTGTATGCTGTCTG	NA	False	NA	21	True	AATAAA	-21	NA	130266284	130285654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
m54284U_201203_174622/12256280/ccs	chr11	+	3650	16	NNC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	29.7564932223017	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8823	False	NA	19	True	AATAAA	-13	NA	115921148	115952040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949152_115949251_115949814_115950073_115950648
m54284U_201203_174622/12256529/ccs	chr16	+	1992	10	NIC	ENSMUSG00000022841.16	novel	2080	11	NA	NA	0	-136	intron_retention	FALSE	canonical	3	142	junction_4	842.109842986247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGGGCCCGCAGAG	1394	False	NA	NA	False	AATAAA	-26	NA	20354268	20362670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360842_20360946_20361045_20361388_20361501_20362060
m54284U_201203_174622/12256761/ccs	chr19	-	193	1	Intergenic	novelGene_9304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGATCAAGACAGGGTT	NA	False	NA	NA	False	NA	NA	NA	45958565	45958372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45958400_45958600
m54284U_201203_174622/12257078/ccs	chr3	+	2829	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	120.844519648158	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201203_174622/12257381/ccs	chr4	-	12363	42	NIC	ENSMUSG00000028649.22	novel	23402	98	NA	NA	269	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_41	63.1042120812187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTTTGTAATTCTTG	NA	False	NA	-12	True	ATTAAA	-14	NA	123305752	123243512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123290886_123291214_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123301230
m54284U_201203_174622/122620692/ccs	chr3	-	176	1	Intergenic	novelGene_1605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAGGAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	103142740	103142564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_103142600_103142700
m54284U_201203_174622/122751504/ccs	chr4	+	3662	9	NIC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	54.6601717432355	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGGCATTTTTCCGG	NA	False	NA	39	True	AATAAA	-21	NA	141521154	141543287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
m54284U_201203_174622/122751524/ccs	chr1	+	6866	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	0	4428	0	-4428	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTGAAGATGTTTTAAA	NA	False	NA	20	True	NA	NA	NA	55276335	55283201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_55276300_55283200
m54284U_201203_174622/122814643/ccs	chrX	-	2106	5	NNC	ENSMUSG00000015290.16	novel	2442	4	NA	NA	0	10262	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	731.195724481482	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCATAGGTGTTTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	73412164	73399061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_73400570_73411052_73411193_73411306_73411516_73411758_73411865_73412021
m54284U_201203_174622/122816564/ccs	chr19	+	3497	11	ISM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	740	-402	218	0	3prime_fragment	FALSE	canonical	3	39	junction_10	16.2098735343617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55730991	55922086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
m54284U_201203_174622/122882293/ccs	chr11	+	3545	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_23	160.438568929045	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
m54284U_201203_174622/122945959/ccs	chr12	-	3387	11	NIC	ENSMUSG00000055917.16	novel	2438	13	NA	NA	0	-504	intron_retention	FALSE	canonical	3	359	junction_5	47.5736271478221	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAACTTTGTCATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	40495773	40365548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
m54284U_201203_174622/122946820/ccs	chr4	+	3048	6	Fusion	ENSMUSG00000078498.6_ENSMUSG00000087207.9	novel	585	4	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_3	204.124079912195	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	4110	False	NA	NA	False	NA	NA	NA	147314740	147418191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_+_147314893_147316807_147316901_147337753_147337859_147409230_147409335_147413438_147413566_147415724
m54284U_201203_174622/122948260/ccs	chr4	-	2836	18	NIC	ENSMUSG00000038816.15	novel	3664	19	NA	NA	0	-555	combination_of_known_junctions	FALSE	canonical	3	86	junction_17	49.5178133688317	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGATTTAAACCTTTT	-16	True	NA	-4	True	AATAAA	-19	NA	56846092	56811489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56845963
m54284U_201203_174622/123012378/ccs	chr9	+	1200	8	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	479	junction_1	696.204344855674	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_64188930_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
m54284U_201203_174622/123078032/ccs	chr13	+	1973	5	NNC	ENSMUSG00000033991.10	novel	2116	5	NA	NA	0	-179	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	99.1476172179645	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATACTCAGTATTTCAT	NA	False	NA	5	True	ATTAAA	-17	NA	76328543	76338046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_76328672_76330933_76331065_76333245_76333370_76335718_76335814_76336551
m54284U_201203_174622/123142433/ccs	chr8	+	2430	17	NIC	ENSMUSG00000041438.9	novel	3113	15	NA	NA	62	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	298.113122142837	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTAGACATTTTAAATTA	NA	False	NA	12	True	AATAAA	-17	NA	107620344	107649720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_107620605_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
m54284U_201203_174622/123143369/ccs	chr9	-	7347	16	NIC	ENSMUSG00000036737.13	novel	4647	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	230	junction_8	21.5977365069172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTCATTTATTTATTTA	5572	False	NA	47	True	AATAAA	-29	NA	119151493	119067497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_119070283_119070776_119070842_119071785_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
m54284U_201203_174622/123210021/ccs	chr18	+	2381	13	NNC	ENSMUSG00000024442.7	novel	2394	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	15	junction_2	102.481265225514	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTTGCCCTTGAGTGTG	3975	False	NA	20	True	AATAAA	-21	NA	38383319	38395682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_38383453_38384138_38384254_38384340_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
m54284U_201203_174622/123210054/ccs	chr5	-	4237	28	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	51	junction_7	238.444243093583	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201203_174622/12322256/ccs	chr3	-	3458	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	246.854055170629	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201203_174622/12322301/ccs	chr19	-	2227	17	NNC	ENSMUSG00000024942.20	novel	3122	22	NA	NA	5927	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_16	63.9987487670657	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTCTCTGGGTGTTA	8524	False	NA	-7	True	AATAAA	-13	NA	6059306	6038573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6059279
m54284U_201203_174622/12322404/ccs	chr4	-	1891	3	NIC	ENSMUSG00000037752.5	novel	4245	3	NA	NA	0	1206	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTATGTACCACTAAGTG	4062	False	NA	-9	True	ATTAAA	-21	NA	132459839	132454610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_132455882_132458186_132458451_132459483
m54284U_201203_174622/12322485/ccs	chr7	-	5004	28	ISM	ENSMUSG00000030739.19	ENSMUST00000107899.10	6390	40	26798	2	-5918	0	3prime_fragment	FALSE	canonical	2	8	junction_26	22.3181263871343	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATGGCTGCGTTTCTAA	NA	False	NA	-3	True	AATAAA	-15	NA	44288127	44255228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282358_44282429_44282898_44283021_44283782_44283971_44287188_44287304_44287713
m54284U_201203_174622/12323019/ccs	chr9	+	1596	9	NNC	ENSMUSG00000066705.8	novel	1789	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	438.881532990396	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGAGTGGCTTTTCTTCT	625	False	NA	22	True	AATAAA	-26	NA	45281739	45307457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_45281787_45287685_45287750_45301285_45301346_45301934_45301971_45302074_45302150_45302858_45302896_45303512_45303563_45303973_45304024_45306280
m54284U_201203_174622/12323131/ccs	chr2	-	2814	11	NIC	ENSMUSG00000027452.12	novel	3618	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	53.8924855615326	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGATGTTTTTGGTTGAC	5054	False	NA	-5	True	AATAAA	-27	NA	150480035	150460024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_150461713_150463433_150463553_150466718_150466783_150466909_150467038_150467685_150467813_150468132_150468246_150469196_150469290_150470413_150470552_150471665_150471814_150479766_150479920_150479992
m54284U_201203_174622/123340310/ccs	chr15	-	1687	15	NIC	ENSMUSG00000036678.9	novel	1814	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_13	134.442101186453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCAGGATGTAACTCCG	NA	False	NA	-9	True	AATAAA	-21	NA	102259130	102246690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102258387_102258516_102258930
m54284U_201203_174622/123405555/ccs	chr2	+	1587	12	NNC	ENSMUSG00000027018.12	novel	1576	11	NA	NA	0	-112	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	835.384832386738	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCACCGCCCACTGCT	5118	False	NA	12	True	AATAAA	-13	NA	71219603	71271854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71242206_71242330_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
m54284U_201203_174622/123405563/ccs	chr15	+	2460	9	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	245	junction_2	20.9030500166842	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	4826	False	NA	24	True	AATAAA	-27	NA	76215543	76219107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217574_76217663_76218091_76218213_76218405_76218489_76218661_76218781
m54284U_201203_174622/123406861/ccs	chr6	+	6034	5	NNC	ENSMUSG00000032712.17	novel	6066	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	109.148980755663	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTCTTCATGGTTCT	NA	False	NA	12	True	AATAAA	-24	NA	149210953	149237161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_149211403_149211819_149211876_149226902_149231283_149232923_149233005_149236093
m54284U_201203_174622/123471523/ccs	chr2	+	1295	10	NIC	ENSMUSG00000026914.16	novel	1541	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	160	junction_1	558.351166105488	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCCCGAGGTCTTTTTG	8613	False	NA	31	True	AATAAA	-17	NA	61542103	61630720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_61542218_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
m54284U_201203_174622/123471766/ccs	chr1	+	1274	7	NIC	ENSMUSG00000026096.15	novel	1723	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	47.461387815079	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCATTTCGTGTTTCA	NA	False	NA	11	True	AATAAA	-31	NA	53352812	53365326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_53353018_53354014_53354259_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
m54284U_201203_174622/123535721/ccs	chr2	-	4393	20	NIC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_8	168.338186851215	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740936	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165740835
m54284U_201203_174622/123603755/ccs	chr3	-	3461	26	NIC	ENSMUSG00000042520.17	novel	3494	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	320	junction_1	177.654063843189	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCTGCGTTCTTTCCGT	3507	False	NA	-4	True	AATAAA	-19	NA	89959822	89913526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201203_174622/123668938/ccs	chr2	+	3991	22	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	344.707329276798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29780777_29781015_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201203_174622/123864533/ccs	chr4	-	3597	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_10	34.3634980757198	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	-7	True	NA	-7	True	AATAAA	-21	NA	43025819	43017634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
m54284U_201203_174622/123865714/ccs	chr4	+	2736	21	NIC	ENSMUSG00000029062.15	novel	2595	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	136.859882726824	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3976	False	NA	23	True	ATTAAA	-28	NA	155709339	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155709399_155709641_155709797_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201203_174622/123865916/ccs	chr1	-	4454	16	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	72.2236034055965	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52272391	52224438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_52226954_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52239776_52239811_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
m54284U_201203_174622/12388037/ccs	chr12	+	4261	8	NIC	ENSMUSG00000020994.6	novel	3485	9	NA	NA	0	-136	intron_retention	FALSE	canonical	3	465	junction_7	32.2066034552302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTAGTACTTGTATT	NA	False	NA	17	True	AATAAA	-23	NA	59113707	59120648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59117084_59117164_59117304_59118211
m54284U_201203_174622/123928608/ccs	chr2	-	2754	18	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	0	-499	combination_of_known_junctions	FALSE	canonical	3	115	junction_17	145.431799495496	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTACTGCCTGGTTCCTG	NA	False	NA	-2	True	AATAAA	-18	NA	37593871	37473666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127_37537298_37593678
m54284U_201203_174622/123930443/ccs	chr11	-	2047	1	Intergenic	novelGene_5647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTTGCCTTGGTGTTTT	3702	False	NA	-3	True	NA	NA	NA	3199644	3197597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_3197600_3199600
m54284U_201203_174622/123930457/ccs	chr2	+	935	5	NNC	ENSMUSG00000055943.6	novel	5826	5	NA	NA	0	-4725	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	200.477398975545	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGATTATCTTCTGTTT	360	False	NA	4	True	ATTAAA	-17	NA	112285341	112297782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_112285485_112289809_112289925_112293145_112293285_112295081_112295163_112297325
m54284U_201203_174622/123930587/ccs	chr2	+	705	4	NIC	ENSMUSG00000017723.12	novel	849	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	229.843908386153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGCTTGCCTCACTTTC	113	False	NA	26	True	AATAAA	-32	NA	164404498	164410430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_164404725_164405976_164406133_164407711_164407859_164410254
m54284U_201203_174622/123931485/ccs	chr2	+	177	1	Intergenic	novelGene_824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATGCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69431529	69431706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69431500_69431700
m54284U_201203_174622/123994325/ccs	chr10	+	5265	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_4	43.6870181582075	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12989901_12989965_12992453_12992526_13000599_13000913_13002885
m54284U_201203_174622/123996412/ccs	chr7	+	2047	15	NIC	ENSMUSG00000001829.18	novel	2287	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	13	junction_5	201.655811536714	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATCCACCTTGCCCTCAT	NA	False	NA	18	True	AATAAA	-24	NA	101312963	101437017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
m54284U_201203_174622/124059896/ccs	chr19	-	2934	10	NIC	ENSMUSG00000024982.11	novel	2168	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	443	junction_8	56.5163583879225	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	7439	False	NA	-26	True	AATAAA	-19	NA	55304464	55286751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
m54284U_201203_174622/124061613/ccs	chr10	-	3765	1	Intergenic	novelGene_5173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGACTTAACAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-2	NA	4064089	4060324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_4060300_4064100
m54284U_201203_174622/124061843/ccs	chr13	+	7697	24	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	0	-1705	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	47.9836534862692	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGGGCTCTCAAGGCT	NA	False	NA	57	True	NA	NA	NA	55359631	55461863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
m54284U_201203_174622/124127379/ccs	chr4	+	3647	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_24	134.685399936314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGACGTGTGTGCAT	9940	False	NA	39	True	AATAAA	-31	NA	108857851	108918358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
m54284U_201203_174622/124258539/ccs	chr6	+	4492	14	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	51.0992768507985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	287	False	NA	28	True	AATAAA	-16	NA	113284152	113301821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
m54284U_201203_174622/124324082/ccs	chr10	-	186	1	Intergenic	novelGene_5435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGTCGGGCAGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	78201379	78201193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_78201200_78201400
m54284U_201203_174622/124324335/ccs	chr3	+	4190	13	NIC	ENSMUSG00000038495.15	novel	8101	13	NA	NA	0	-3966	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.7976808144557	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011838	96064480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96012132_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
m54284U_201203_174622/124324586/ccs	chr8	+	3047	5	NIC	ENSMUSG00000046152.17	novel	2962	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	17.8378109643532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTGTCGCAGACTCTC	NA	False	NA	6	True	AATAAA	-16	NA	31677374	31727822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_31677491_31684981_31685318_31691237_31691533_31715829_31715930_31725622
m54284U_201203_174622/124518805/ccs	chr18	+	2655	12	NIC	ENSMUSG00000019143.16	novel	3336	13	NA	NA	0	177	intron_retention	FALSE	canonical	3	88	junction_9	17.4327515454756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGACCTGAGTTCATTT	NA	False	NA	11	True	NA	NA	NA	36916321	36924924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
m54284U_201203_174622/1245760/ccs	chr2	-	5066	5	NNC	ENSMUSG00000017667.10	novel	8205	5	NA	NA	0	-3172	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	10.1827059272082	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGTGAGACTTTTA	4540	False	NA	-3	True	ATTAAA	-14	NA	165230179	165219355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_165223807_165224610_165224704_165225158_165225319_165228845_165228909_165229880
m54284U_201203_174622/124584217/ccs	chr7	-	3661	26	NIC	ENSMUSG00000062444.16	novel	3806	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_25	13.1209755734854	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCACCTTTCCTTC	NA	False	NA	1	True	AATAAA	-17	NA	81139558	81110146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_81110550_81110675_81110815_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81139285
m54284U_201203_174622/124585631/ccs	chrX	+	2914	6	NIC	ENSMUSG00000023092.17	novel	2356	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	131	junction_4	5.23832034148352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTCCTGTCTTTTTATTC	NA	False	NA	12	True	AATAAA	-18	NA	55777146	55838706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55835407_55835823_55836011_55837203
m54284U_201203_174622/124586635/ccs	chr2	-	4017	14	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_4	120.796175338176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATGAAGCATTTTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	48839288	48792835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800258_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
m54284U_201203_174622/124649728/ccs	chr11	-	4243	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	124.448115025232	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470513	61408075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61438833_61438869_61470392
m54284U_201203_174622/124650761/ccs	chr17	-	1513	6	NIC	ENSMUSG00000039183.7	novel	950	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	605	junction_4	60.398675482166	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGTCAAGGTGTCTGT	NA	False	NA	-11	True	AGTAAA	-19	NA	25105312	25101590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104812_25105252
m54284U_201203_174622/124651095/ccs	chr3	+	2329	9	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	406	junction_8	25.2929708614864	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4481	False	NA	45	True	AATAAA	-31	NA	95222557	95230910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
m54284U_201203_174622/124652378/ccs	chr4	+	1068	1	Genic_Genomic	ENSMUSG00000048406.6	novel	NA	NA	NA	NA	-24	-660	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTCCACTTATTTT	NA	False	NA	NA	False	AATAAA	-27	NA	141273475	141274543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_+_141273500_141274500
m54284U_201203_174622/124715080/ccs	chr11	-	6096	27	NIC	ENSMUSG00000037275.15	novel	6213	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_11	58.0285075829776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCTTTTCTTTATCA	NA	False	NA	0	True	ATTAAA	-21	NA	58059365	58010827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
m54284U_201203_174622/124715444/ccs	chr5	-	1919	13	NIC	ENSMUSG00000029012.12	novel	2103	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	163.420788661255	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGCTGTGTTCTTTGGT	NA	False	NA	-7	True	AATAAA	-14	NA	22755302	22691486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_22692216_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
m54284U_201203_174622/124715887/ccs	chr11	+	1176	4	NNC	ENSMUSG00000049904.8	novel	1568	4	NA	NA	184	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	27.8846831711525	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTATCTGTGTAGTTC	NA	False	NA	7	True	ATTAAA	-16	NA	22462271	22469234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_22462376_22467187_22467292_22467407_22467522_22468380
m54284U_201203_174622/124717290/ccs	chr1	-	3002	23	NIC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	75	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_22	21.1026613025369	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	NA	False	NA	-1	True	CATAAA	-18	NA	183126882	183107681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183126628
m54284U_201203_174622/124717776/ccs	chr9	+	1375	9	NNC	ENSMUSG00000032002.11	novel	2421	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_8	424.067193231214	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTCCGTTGAGTGTCA	10	True	NA	24	True	AATAAA	-32	NA	7184550	7207040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206072_7206223_7206719
m54284U_201203_174622/124782884/ccs	chr17	+	4485	8	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	238	junction_1	46.1408668301402	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTATTGTGTGGATGGAA	NA	False	NA	13	True	AATAAA	-16	NA	34029496	34041892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038971_34040742_34040889_34040979_34041181_34041259
m54284U_201203_174622/124847374/ccs	chr10	+	2506	11	NIC	ENSMUSG00000003345.17	novel	2348	11	NA	NA	-154	0	intron_retention	FALSE	canonical	3	537	junction_4	58.6209007095592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCTGGGCTTTACCA	NA	False	NA	17	True	GGGGCT	-44	NA	80458517	80476583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80473914_80473994_80474144_80474227_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
m54284U_201203_174622/124848405/ccschrUn	chrUn_JH584304v1	-	2241	6	Intergenic	novelGene_9756	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_4	274.719202095522	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59701	52189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55702_58563_58836_59591
m54284U_201203_174622/124913724/ccs	chr11	+	11327	79	NIC	ENSMUSG00000056342.17	novel	11363	80	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	28.4435754125342	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTATTTTTATTGACA	342	False	NA	15	True	AATAAA	-22	NA	23256915	23439744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
m54284U_201203_174622/124914173/ccs	chr11	+	5438	8	NIC	ENSMUSG00000000275.17	novel	5590	9	NA	NA	53	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	192.418018588569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACATTGTCCTGCCTTTTG	NA	False	NA	24	True	NA	NA	NA	88890254	88911119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906544_88906644_88907020
m54284U_201203_174622/124914470/ccs	chr19	+	186	1	Intergenic	novelGene_9063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATTGAGAAACCATC	NA	False	NA	NA	False	AATAGA	-7	NA	3605538	3605724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3605500_3605700
m54284U_201203_174622/124977485/ccs	chr2	+	2995	15	NNC	ENSMUSG00000027247.17	novel	3201	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	118.35093526268	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_91480598_91481843_91482000_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
m54284U_201203_174622/125042970/ccs	chr11	+	7570	38	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	0	0	intron_retention	FALSE	canonical	3	514	junction_1	89.0858533227089	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152577	78181449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
m54284U_201203_174622/125044637/ccs	chrX	+	2004	7	NIC	ENSMUSG00000046774.18	novel	1991	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	47	junction_5	86.9329243344162	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841368_100841707_100841772_100841947_100841990_100842072
m54284U_201203_174622/125044769/ccs	chr2	+	4647	4	NNC	ENSMUSG00000078866.11	novel	794	4	NA	NA	0	1067	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	44.5146667465405	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGTCATGGTATC	NA	False	NA	25	True	NA	NA	NA	177156525	177170989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_177156614_177165078_177165206_177165410_177165472_177166618
m54284U_201203_174622/125109313/ccs	chr13	+	204	1	Intergenic	novelGene_7108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATCTGAGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	55778212	55778416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55778200_55778400
m54284U_201203_174622/125110315/ccs	chr8	-	1621	6	NNC	ENSMUSG00000051978.10	novel	1557	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_5	79.7696684210233	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATATTTGTGATAAGATT	NA	False	NA	-6	True	AATAAA	-18	NA	14140301	14077560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140176
m54284U_201203_174622/125110597/ccs	chr16	+	2880	26	NIC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	63	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_19	338.451806909049	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	NA	False	NA	11	True	AATAAA	-16	NA	48251662	48451263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_48251766_48257637_48257692_48262767_48262803_48266675_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731_48378861_48381897_48382004_48385940_48386080_48402779_48402849_48407255_48407502_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
m54284U_201203_174622/125175698/ccs	chr4	+	6050	13	NIC	ENSMUSG00000039852.18	novel	496	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	28.7347785792757	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGTTGGCCAGTGC	NA	False	NA	19	True	AATAAA	-20	NA	150654044	150706423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_150654144_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
m54284U_201203_174622/12519542/ccs	chr19	-	3146	1	Genic_Genomic	ENSMUSG00000034321.15	novel	NA	NA	NA	NA	9979	2168	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGCATGCCTTTAATAC	5319	False	NA	NA	False	NA	NA	NA	41911708	41908562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_41908600_41911700
m54284U_201203_174622/125306539/ccs	chr4	-	2033	5	NIC	ENSMUSG00000028578.9	novel	2107	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	115.798316049932	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGATATCTTTTGCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	94445033	94388317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_94389654_94437355_94437432_94438658_94438744_94439501_94439703_94444698
m54284U_201203_174622/125306627/ccs	chr5	+	1489	8	NIC	ENSMUSG00000025538.16	novel	2264	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	161.455749924471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTATTTATTTATTAT	NA	False	NA	16	True	AATAAA	-16	NA	129875826	129892273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129875928_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
m54284U_201203_174622/125372288/ccs	chr3	+	2835	26	NIC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_15	132.711018382047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201203_174622/125436258/ccs	chr4	+	4857	2	NNC	ENSMUSG00000085626.2	novel	642	2	NA	NA	-2522	896	intron_retention	FALSE	canonical	3	41	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTAGGATGGACACATA	5765	False	NA	NA	False	NA	NA	NA	119077848	119082908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_119079097_119079299
m54284U_201203_174622/125501604/ccs	chr4	+	4216	1	Genic_Genomic	ENSMUSG00000084350.2	novel	NA	NA	NA	NA	2895	2405	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	145554701	145558917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_+_145554700_145558900
m54284U_201203_174622/125501770/ccs	chr19	-	5800	10	NIC	ENSMUSG00000039652.17	novel	5899	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_9	2.19988776369148	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGTGCGAGATCTCAACAA	9205	False	NA	-6	True	AATAAA	-17	NA	37184861	36998696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116530_37116622_37151366_37152386_37184693
m54284U_201203_174622/125503866/ccs	chr4	-	3382	9	ISM	ENSMUSG00000014592.22	ENSMUST00000049790.14	8423	24	0	83543	0	-56945	5prime_fragment	FALSE	canonical	1	4	junction_3	423.724483007532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATCCCCTGAGTGCCTT	NA	False	NA	NA	False	AATAAA	-33	NA	151946203	151227525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_-_151230026_151232866_151233008_151248272_151248427_151374488_151374561_151537740_151537877_151670871_151670940_151914874_151914994_151920270_151920341_151946081
m54284U_201203_174622/125504232/ccs	chr17	+	4134	25	NNC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_17	28.4428032295615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATTTTTATTTTGACT	NA	False	NA	20	True	NA	NA	NA	25352364	25381078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375711_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
m54284U_201203_174622/125504263/ccs	chr11	-	2712	11	NIC	ENSMUSG00000020534.15	novel	2858	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_9	355.35677846356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTCATATTATTTATT	NA	False	NA	-8	True	AATAAA	-19	NA	60702091	60678929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60697771_60697869_60701729
m54284U_201203_174622/125568107/ccs	chr2	+	2793	3	NIC	ENSMUSG00000062175.14	novel	484	4	NA	NA	-56	0	intron_retention	FALSE	canonical	3	38	junction_1	89.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682885	156697490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156683011_156686075_156686302_156695048
m54284U_201203_174622/125568882/ccs	chr8	-	1471	9	NNC	ENSMUSG00000031781.15	novel	4359	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_7	543.20023932248	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTTACTGTGAGTGTG	NA	False	NA	-14	True	ATTAAA	-19	NA	95564889	95549188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559176_95559329_95564879
m54284U_201203_174622/125569337/ccs	chr17	-	7112	32	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	0	0	intron_retention	FALSE	canonical	3	94	junction_22	70.4444046885562	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56783389	56719430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
m54284U_201203_174622/125634705/ccs	chr19	-	3421	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_17	265.434357090177	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576867	40538700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40576753
m54284U_201203_174622/125635340/ccs	chr5	+	148	1	Intergenic	novelGene_3066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAAAATGTACATTAT	8479	False	NA	NA	False	NA	NA	NA	146087735	146087883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_146087700_146087900
m54284U_201203_174622/125699182/ccs	chr6	+	2262	13	NIC	ENSMUSG00000038388.15	novel	1281	10	NA	NA	-212	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	312.40984255017	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTGCGCATCAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	50087627	50175404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_50088108_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
m54284U_201203_174622/125763976/ccs	chrX	+	171	1	Intergenic	novelGene_9430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATTGGGCTGTAGG	NA	False	NA	NA	False	NA	NA	NA	37605562	37605733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_37605600_37605700
m54284U_201203_174622/125766489/ccs	chr12	-	1805	1	Intergenic	novelGene_6705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAGCTAAATTGAGTA	NA	False	NA	NA	False	NA	NA	NA	71233704	71231899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71231900_71233700
m54284U_201203_174622/125830604/ccs	chr17	-	1082	5	NIC	ENSMUSG00000015478.14	novel	1238	6	NA	NA	72	0	intron_retention	FALSE	canonical	3	17	junction_2	458.87927333886	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCCAGTCTCTCCC	896	False	NA	-23	True	NA	NA	NA	34822563	34820064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34820641_34820714_34820833_34821058_34821172_34821264_34821284_34822307
m54284U_201203_174622/125831793/ccs	chr3	-	1890	9	NNC	ENSMUSG00000040209.13	novel	2013	10	NA	NA	888	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_8	100.704316565875	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTTTCTATGTCTGTTT	NA	False	NA	-15	True	NA	NA	NA	9674257	9503351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674113
m54284U_201203_174622/12584225/ccs	chr10	+	3044	24	ISM	ENSMUSG00000025401.10	ENSMUST00000079590.7	3439	27	1634	0	1634	0	3prime_fragment	FALSE	canonical	2	6	junction_6	3.36837286056462	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCGTATTTATTTCTT	NA	False	NA	22	True	AATAAA	-28	NA	127542672	127556809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_127542794_127542995_127543043_127543222_127543287_127543486_127543586_127546018_127546123_127546242_127546391_127546746_127546866_127546952_127547040_127548452_127548519_127548631_127548737_127549589_127549653_127549853_127550055_127550194_127550422_127550749_127550951_127551118_127551213_127551500_127551651_127551745_127551815_127552156_127552232_127554380_127554516_127555119_127555227_127555501_127555635_127555736_127555890_127556021_127556150_127556461
m54284U_201203_174622/12584403/ccs	chr14	-	402	3	NNC	ENSMUSG00000043681.6	novel	408	3	NA	NA	-6879	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	1267.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGAGTTTACCTCTGTT	NA	False	NA	-6	True	AATAAA	-21	NA	34084269	34073837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_34074035_34075654_34075718_34084127
m54284U_201203_174622/12584545/ccs	chr11	-	1884	1	Antisense	novelGene_ENSMUSG00000020873.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCAAGACAGCTGAACAAAA	NA	False	NA	NA	False	NA	NA	NA	95278250	95276366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_95276400_95278200
m54284U_201203_174622/125897427/ccs	chr5	-	1744	11	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	468	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	550.336524319439	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527112	117517213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_117517966_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
m54284U_201203_174622/125962433/ccs	chr4	+	3209	6	NIC	ENSMUSG00000028861.14	novel	937	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1282	junction_5	27.9427987145168	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAATGATGGAAGATGG	NA	False	NA	27	True	AATAAA	-12	NA	125940769	125949325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_125941272_125942427_125942507_125944272_125944322_125945117_125947352_125948753_125948946_125949172
m54284U_201203_174622/126028372/ccs	chr1	+	2670	12	NIC	ENSMUSG00000026280.18	novel	4173	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	287	junction_1	27.3356849085858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACATGAATTTCTG	NA	False	NA	14	True	ATTAAA	-20	NA	93682709	93715901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93713689_93714232_93714327_93715407
m54284U_201203_174622/126093963/ccs	chr5	+	175	1	Intergenic	novelGene_3007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGTTCCCTTAAAA	4443	False	NA	NA	False	NA	NA	NA	138108180	138108355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_138108200_138108400
m54284U_201203_174622/126158793/ccs	chr2	-	3787	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	344.099132544317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATATTAGCATTTATT	NA	False	NA	44	True	NA	NA	NA	94268481	94242026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_94244127_94248549_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
m54284U_201203_174622/126225101/ccs	chr10	+	5698	7	NIC	ENSMUSG00000040021.14	novel	7209	8	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_3	44.2621609152659	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACTGGAAAGCTGAAT	NA	False	NA	23	True	AATAAA	-26	NA	7556977	7592224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_7557215_7567098_7567579_7573265_7573414_7581223_7581807_7586228_7586412_7586612_7586720_7588264
m54284U_201203_174622/126290091/ccs	chr15	-	4283	18	NIC	ENSMUSG00000033075.18	novel	3806	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_17	37.6096321314865	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGCGGGCCCTTTCAC	6407	False	NA	-4	True	AATAAA	-13	NA	97991186	97939112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990528
m54284U_201203_174622/126290257/ccs	chr3	+	190	1	Intergenic	novelGene_1375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTATTCCCCCCGCCCC	NA	False	NA	NA	False	NA	NA	NA	31213801	31213991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_31213800_31214000
m54284U_201203_174622/126353961/ccs	chr13	-	2788	29	NIC	ENSMUSG00000021585.11	novel	2857	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	26.471658891913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGCCTGAACTCTAC	NA	False	NA	NA	False	AATAAA	-45	NA	74918768	74842373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
m54284U_201203_174622/126354890/ccs	chrX	-	1156	9	NNC	ENSMUSG00000058328.14	novel	1650	9	NA	NA	0	303	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_8	132.269551957357	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGCATGCTTTCATT	NA	False	NA	NA	False	AATAAA	-14	NA	72161308	72151711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_72152123_72152218_72152324_72153534_72153634_72155020_72155121_72155796_72155918_72156950_72156986_72158152_72158223_72158740_72158878_72161230
m54284U_201203_174622/126355734/ccs	chrX	-	190	1	Antisense	novelGene_ENSMUSG00000031010.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAACTGAGTTACAATTA	NA	False	NA	NA	False	NA	NA	NA	12995734	12995544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chrX_-_12995500_12995700
m54284U_201203_174622/126419034/ccs	chr3	+	202	1	Intergenic	novelGene_1545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATTGTATGAATTTTT	NA	False	NA	NA	False	NA	NA	NA	90382631	90382833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_90382600_90382800
m54284U_201203_174622/12649663/ccs	chr7	+	177	1	Intergenic	novelGene_3603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGAGTATACA	NA	False	NA	NA	False	NA	NA	NA	3236970	3237147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3237000_3237100
m54284U_201203_174622/12650846/ccs	chr10	-	171	1	Intergenic	novelGene_5542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAATATTACAAAA	NA	False	NA	NA	False	NA	NA	NA	115227886	115227715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_115227700_115227900
m54284U_201203_174622/126616718/ccs	chr1	+	3094	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	1434	junction_3	218.380347859786	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724161	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
m54284U_201203_174622/126616748/ccs	chr5	+	4130	33	NIC	ENSMUSG00000036928.15	novel	4211	34	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_21	29.0836616504869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGTATGACTTGAGATTG	NA	False	NA	17	True	AATAAA	-17	NA	138278787	138310652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_138278917_138280126_138280301_138280880_138280978_138281294_138281415_138287457_138287555_138288452_138288530_138288970_138289176_138289591_138289744_138294095_138294170_138294963_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296885_138297069_138297174_138297392_138297486_138297600_138297691_138297914_138298116_138298215_138298287_138298385_138298474_138299203_138299297_138299418_138299588_138299695_138299833_138300785_138300888_138302303_138302453_138302635_138302765_138302846_138303005_138306730_138306918_138307088_138307191_138307460_138307534_138309995_138310068_138310297
m54284U_201203_174622/126618105/ccs	chr18	-	181	1	Intergenic	novelGene_8984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATCATATTACTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	64547442	64547261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_64547300_64547400
m54284U_201203_174622/126618173/ccs	chr7	-	4234	20	NIC	ENSMUSG00000035401.10	novel	3564	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	21.478198699858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAGAAAAA	3502	False	NA	NA	False	NA	NA	NA	98305990	98239806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
m54284U_201203_174622/126682939/ccs	chr11	-	177	1	Intergenic	novelGene_6413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAACAA	8962	False	NA	NA	False	NA	NA	NA	107123690	107123513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107123500_107123700
m54284U_201203_174622/126683156/ccs	chr9	-	175	1	Intergenic	novelGene_4649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGGTTCTTTCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	20798781	20798606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_20798600_20798800
m54284U_201203_174622/126748913/ccs	chr16	-	4060	20	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_17	413.303996963273	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
m54284U_201203_174622/126814046/ccs	chr7	+	1577	6	NIC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	272.736209550547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_138448245_138448340_138448434_138474729_138474781_138475848_138476014_138478184_138478447_138483937
m54284U_201203_174622/126879431/ccs	chr7	-	3811	24	NNC	ENSMUSG00000052296.8	novel	3862	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	63.5486506693129	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTGGGACTGTGA	NA	False	NA	-3	True	AATAAA	-17	NA	4662018	4634493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636550_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
m54284U_201203_174622/126943298/ccs	chr10	+	8428	30	NNC	ENSMUSG00000040054.18	novel	8369	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	121.396942293031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127928651	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127928720_127932248_127932393_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
m54284U_201203_174622/126945296/ccs	chr7	-	4157	20	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	21.2537759395772	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAGAAAGAAAAA	3690	False	NA	NA	False	NA	NA	NA	98305802	98239806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
m54284U_201203_174622/127008944/ccs	chr5	-	3653	17	NNC	ENSMUSG00000062604.12	novel	6491	15	NA	NA	0	-691	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_15	90.8021329251136	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATTGCCTTGCTTATTA	NA	False	NA	-6	True	ATTAAA	-21	NA	23881012	23711140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732921_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324_23821389_23880717_23880773_23880855
m54284U_201203_174622/127010661/ccs	chr2	-	4936	25	NIC	ENSMUSG00000038844.11	novel	6383	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	17.7575785855567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTTAAATTGAGCTGCT	NA	False	NA	NA	False	ATTAAA	-16	NA	142743364	142460630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_142461837_142490347_142490432_142514208_142514299_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
m54284U_201203_174622/127010900/ccs	chr4	-	166	1	Intergenic	novelGene_2059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAGGTGATGTTTTAA	3905	False	NA	NA	False	NA	NA	NA	119123445	119123279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_119123300_119123400
m54284U_201203_174622/127011366/ccs	chr11	-	2176	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	184	junction_6	82.6291917746588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508762	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201203_174622/127075801/ccs	chr11	-	4886	20	NIC	ENSMUSG00000006920.15	novel	4207	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	124	junction_19	15.018916972805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCAAGTTGTGTCCTC	2618	False	NA	-7	True	AATAAA	-15	NA	101117276	101081940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
m54284U_201203_174622/127141295/ccs	chr18	+	5659	1	NIC	ENSMUSG00000044393.16	novel	5766	15	NA	NA	0	-19184	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	20691130	20696789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_20691100_20696800
m54284U_201203_174622/12716305/ccs	chr4	+	3155	13	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	356.394873076978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAAATTTTACGTGGT	4637	False	NA	-32	True	NA	NA	NA	155896957	155908760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155903207_155903326_155903458_155904162_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
m54284U_201203_174622/127207518/ccs	chr14	-	2364	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	-77	-4556	combination_of_known_junctions	FALSE	canonical	3	51	junction_18	68.3302824522188	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGCTTTCCTAAACAAGA	NA	False	NA	-1	True	AATAAA	-22	NA	26692539	26645500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26685603_26685664_26686815_26686915_26692357
m54284U_201203_174622/127272209/ccs	chrX	+	1311	1	Intergenic	novelGene_9614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACATTTATTGTCACA	NA	False	NA	NA	False	NA	NA	NA	112067069	112068380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_112067100_112068400
m54284U_201203_174622/127272694/ccs	chr11	+	5773	27	NNC	ENSMUSG00000034543.16	novel	5656	26	NA	NA	0	0	intron_retention	FALSE	canonical	2	20	junction_1	117.313921650492	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599190	3640477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_3600448_3603595_3603713_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
m54284U_201203_174622/127273206/ccs	chr7	-	3948	12	NIC	ENSMUSG00000030780.16	novel	2627	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	145	junction_4	12.7447931354776	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGCTTCATACTGCAGGC	1167	False	NA	-16	True	AGTAAA	-16	NA	127897281	127870550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
m54284U_201203_174622/127402984/ccs	chr11	+	2569	4	NIC	ENSMUSG00000018599.6	novel	2522	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	59.6713219785406	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGTAATTCTTGCTG	NA	False	NA	14	True	AATAAA	-17	NA	60619223	60623777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_60619394_60621108_60621262_60621408_60621619_60621741
m54284U_201203_174622/127467735/ccs	chr2	+	3709	11	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	502	junction_8	50.6083985124999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
m54284U_201203_174622/127533254/ccs	chr15	-	4812	27	NIC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_26	46.5584985473356	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTCTGCCTTTGTTTTTCT	NA	False	NA	-6	True	AATAAA	-18	NA	54935548	54878526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_54879550_54879768_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934844_54935242
m54284U_201203_174622/127598817/ccs	chr19	+	3240	22	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	0	-2771	combination_of_known_junctions	TRUE	canonical	3	40	junction_1	400.999024546288	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919358	38956724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38919663_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
m54284U_201203_174622/127600710/ccs	chr5	+	6373	19	NIC	ENSMUSG00000048271.15	novel	9510	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_15	30.0263772928626	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCCTCATCTGTGTATT	NA	False	NA	7	True	CATAAA	-21	NA	28522174	28621103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613252_28613460_28615568_28615758_28618284_28618374_28618565
m54284U_201203_174622/127730076/ccs	chr11	-	2110	13	NNC	ENSMUSG00000020289.16	novel	2865	13	NA	NA	0	266	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	46.4665351504595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTGTGTGTATGTGTG	4645	False	NA	-3	True	AATATA	-15	NA	32217629	32182668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_32183117_32183903_32184097_32184702_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
m54284U_201203_174622/12780872/ccs	chr17	-	7338	15	NIC	ENSMUSG00000052105.18	novel	7274	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	55.073235100998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACAGGGTCTTGGTGTCA	NA	False	NA	-19	True	AATAAA	-15	NA	66756745	66643982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_66645150_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
m54284U_201203_174622/127861872/ccs	chr17	+	5316	23	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	120.731756488479	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658359	83787790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
m54284U_201203_174622/127862886/ccs	chrX	+	3995	26	NIC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_21	266.015115360011	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/127928027/ccs	chr1	-	2101	5	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	247	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	456.372312372256	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGCCCTTTTTCCTGCAT	NA	False	NA	-4	True	AATAAA	-21	NA	119432277	119398034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432247
m54284U_201203_174622/127928810/ccs	chr6	+	2510	6	NIC	ENSMUSG00000053119.12	novel	347	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	151.398282685108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATATTATGCCTTTG	NA	False	NA	23	True	NA	NA	NA	71521336	71558563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71521430_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
m54284U_201203_174622/127993776/ccs	chr17	+	188	1	Intergenic	novelGene_8758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCATAGTAGAAAATGTAT	NA	False	NA	NA	False	NA	NA	NA	84071809	84071997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_84071800_84072000
m54284U_201203_174622/127993903/ccs	chr4	+	1027	3	NNC	ENSMUSG00000070737.11	novel	1120	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	45	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTACTTCGTCCACT	NA	False	NA	7	True	TTTAAA	-4	NA	127019838	127023437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_127019894_127021611_127021793_127022646
m54284U_201203_174622/128124067/ccs	chr1	-	162	1	Intergenic	novelGene_374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGGAAAAAAAGT	NA	False	NA	NA	False	AATAAA	-14	NA	151431408	151431246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_151431200_151431400
m54284U_201203_174622/128124633/ccs	chr1	+	1662	12	NIC	ENSMUSG00000025911.15	novel	2022	13	NA	NA	0	-163	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.0923344558392	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTCTGTTTCATAAAAGC	NA	False	NA	NA	False	AATAAA	-23	NA	9618279	9646963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_9618377_9620131_9620170_9623147_9623202_9623542_9623698_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
m54284U_201203_174622/128255808/ccs	chr8	-	1515	10	NIC	ENSMUSG00000052926.17	novel	1532	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_9	454.462509828375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	4527	False	NA	-8	True	AATAAA	-14	NA	85696396	85684295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85696350
m54284U_201203_174622/128321711/ccs	chr4	+	3205	14	NIC	ENSMUSG00000028542.18	novel	3479	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	28.5545258539791	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGATGTGCTTTGTCT	NA	False	NA	27	True	AATGAA	-21	NA	117692191	117726502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_117692345_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
m54284U_201203_174622/128385213/ccs	chrX	+	5828	6	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	11.6206712370672	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386226	72402686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826_72396928_72397383
m54284U_201203_174622/128387092/ccs	chr18	+	1081	5	NNC	ENSMUSG00000014504.17	novel	876	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	739.615229359158	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTCATCTTTAAG	NA	False	NA	-42	True	AATAAA	-12	NA	34464197	34469606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_34464564_34464802_34464879_34467345_34467418_34467509_34467622_34469151
m54284U_201203_174622/128387120/ccs	chr11	+	3278	7	NIC	ENSMUSG00000038366.16	novel	758	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	237.309221621636	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697135	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97697172_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201203_174622/128387567/ccs	chr2	+	2425	13	NIC	ENSMUSG00000027074.15	novel	2621	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	9.67923034130297	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGCTTCTACCTCTTTG	NA	False	NA	9	True	AATAAA	-20	NA	84766960	84788853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_84766989_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
m54284U_201203_174622/12845221/ccs	chr8	+	2642	3	NIC	ENSMUSG00000052446.18	novel	2713	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	229	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTGTAGAGACTCTT	NA	False	NA	16	True	AATAAA	-18	NA	72704920	72724177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_72705005_72719637_72719761_72721742
m54284U_201203_174622/128453280/ccs	chrX	+	2921	5	NIC	ENSMUSG00000009995.18	novel	2368	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_4	13.8744369255116	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326355	73333757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73326723_73326877_73327007_73327253_73327624_73331624_73331706_73331783
m54284U_201203_174622/12846414/ccs	chr3	+	3791	15	NIC	ENSMUSG00000027951.17	novel	5909	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	26.0458778907919	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCATATGTAGCACAGACA	NA	False	NA	20	True	ATTAAA	-20	NA	89622328	89658713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652831_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
m54284U_201203_174622/12847605/ccs	chr7	+	5302	18	NIC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_15	49.6653158513657	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808696	140842663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
m54284U_201203_174622/128517389/ccs	chr10	-	2635	18	NIC	ENSMUSG00000020167.15	novel	2920	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	351.55438331653	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269481	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
m54284U_201203_174622/128517557/ccs	chr4	+	4688	14	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_2	41.8667935524905	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTTGTGTGGTGTCTA	2884	False	NA	12	True	ATTAAA	-13	NA	102971958	103022946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_102972021_102972756_102972858_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
m54284U_201203_174622/128517922/ccs	chr1	+	2652	15	NNC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	116.353788428365	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723734_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201203_174622/128518656/ccs	chr5	+	1766	5	NIC	ENSMUSG00000029474.8	novel	4440	6	NA	NA	0	-2346	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	85.4005269304587	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGTTTAATATTGTT	623	False	NA	9	True	AATAAA	-16	NA	122988219	123007008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122988362_123002049_123002458_123004864_123004970_123005182_123005385_123006099
m54284U_201203_174622/128582326/ccs	chr11	+	2564	4	NIC	ENSMUSG00000020484.20	novel	2129	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	876	junction_3	39.9110121255887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTTCTGTGATTTCTA	NA	False	NA	34	True	ATTAAA	-17	NA	5470994	5475893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_5471201_5471922_5472020_5473332_5474385_5474684
m54284U_201203_174622/128583350/ccs	chr6	+	2952	9	NNC	ENSMUSG00000062190.13	novel	2245	10	NA	NA	291	0	intron_retention	FALSE	canonical	3	6	junction_1	23.0349598436811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGGAGTCTTAATA	NA	False	NA	8	True	AATAAA	-18	NA	57680362	57716424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_57680477_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
m54284U_201203_174622/128583916/ccs	chr9	-	715	3	NIC	ENSMUSG00000091537.3	novel	380	3	NA	NA	0	-101	intron_retention	FALSE	canonical	3	4656	junction_2	594.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTGTGTGTGCTTGT	NA	False	NA	NA	False	ATTAAA	-19	NA	108911446	108907055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108907494_108911069_108911295_108911394
m54284U_201203_174622/128714729/ccs	chr19	-	5073	15	NNC	ENSMUSG00000046324.13	novel	7058	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_1	85.7602555300031	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTTGGAAAAAATGGATC	NA	False	NA	-17	True	AATAAA	-13	NA	29625815	29587601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_29590083_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
m54284U_201203_174622/128843940/ccs	chr4	+	3418	12	NNC	ENSMUSG00000034042.17	novel	448	3	NA	NA	-525	-146	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	92.2834297420652	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTAGAGAGTGGATT	NA	False	NA	3	True	AATATA	-7	NA	116414329	116450933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_116414477_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
m54284U_201203_174622/128911719/ccs	chr7	+	3607	11	NIC	ENSMUSG00000030748.10	novel	3696	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	3.9	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTCCTTTACTATACAC	NA	False	NA	NA	False	AATAAA	-15	NA	125151442	125177139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_125151501_125163723_125163909_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
m54284U_201203_174622/128976147/ccs	chr5	-	8895	49	NIC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_46	20.0123225927316	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125256283	125094225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
m54284U_201203_174622/129040599/ccs	chr1	+	193	1	Intergenic	novelGene_466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGACCATGGGAACAA	9993	False	NA	NA	False	NA	NA	NA	170640903	170641096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_170640900_170641100
m54284U_201203_174622/129040892/ccs	chr2	-	2644	16	NIC	ENSMUSG00000027366.13	novel	5616	15	NA	NA	177	1024	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	7.10742960257473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTTTTTTTCTGATCT	8456	False	NA	NA	False	ATTAAA	-18	NA	126774978	126735159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755219_126755274_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
m54284U_201203_174622/12910788/ccs	chr10	-	2462	8	NIC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_6	333.910900983958	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	5257	False	NA	-11	True	AATAAA	-12	NA	62322525	62291055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62316336_62316487_62322436
m54284U_201203_174622/129108742/ccs	chr5	+	3909	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	222.683764466375	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186421	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/12911516/ccs	chr6	+	2629	9	NIC	ENSMUSG00000029823.17	novel	2702	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_8	38.4640660227179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAACAGCAGTTTCTGCA	NA	False	NA	19	True	AATAAA	-21	NA	38528399	38586362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_38528844_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38580211_38580404_38585087
m54284U_201203_174622/12911837/ccs	chr13	+	216	1	Intergenic	novelGene_7295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTCTTTAGAAAGAAAACG	NA	False	NA	NA	False	NA	NA	NA	107408147	107408363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_107408100_107408400
m54284U_201203_174622/12912507/ccs	chr11	+	179	1	Intergenic	novelGene_5745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCAGGCACATTTCATG	NA	False	NA	NA	False	NA	NA	NA	23680576	23680755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_23680600_23680800
m54284U_201203_174622/12912617/ccs	chr1	-	2542	12	NIC	ENSMUSG00000016181.11	novel	5504	12	NA	NA	0	466	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	18.7025432486318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTATGCGTATTG	NA	False	NA	-17	True	NA	NA	NA	192812552	192789594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_192790095_192796064_192796196_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
m54284U_201203_174622/129174069/ccs	chr12	+	3973	8	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	107	junction_2	38.2713192554297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807618	117842441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117839460_117840640_117840778_117841201
m54284U_201203_174622/129239099/ccs	chr6	+	6474	39	NNC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_25	121.376899781441	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1789	False	NA	14	True	AATAAA	-18	NA	125073124	125107554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097170_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
m54284U_201203_174622/129239895/ccs	chr11	-	2463	14	NIC	ENSMUSG00000020719.15	novel	3559	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	497	junction_13	995.534526816042	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAGTGAAATTGTACTT	8963	False	NA	-9	True	AATAAA	-45	NA	106680011	106672373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098_106679286_106679841
m54284U_201203_174622/129368313/ccs	chr1	+	3649	7	ISM	ENSMUSG00000048865.17	ENSMUST00000056449.9	4494	12	14255	0	14210	0	3prime_fragment	FALSE	canonical	0	0	junction_5	9.51606828241346	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTATGTACTTTGTCTT	900	False	NA	NA	False	AATAAA	-28	NA	171230776	171237808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_171230909_171231348_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
m54284U_201203_174622/129369683/ccs	chr5	-	3825	20	NIC	ENSMUSG00000037364.13	novel	3024	20	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	237.813912679035	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	8257	False	NA	-8	True	AGTAAA	-22	NA	137305936	137293972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137299579_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
m54284U_201203_174622/129500992/ccs	chr6	+	4469	17	NNC	ENSMUSG00000031668.15	novel	4513	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	17.7939596492742	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTGACTCTTATTTTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	70821498	70882229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858511_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
m54284U_201203_174622/129501780/ccs	chr7	+	2913	2	NIC	ENSMUSG00000054715.12	novel	2995	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGGCTTCTCCAACATC	NA	False	NA	30	True	AATAAA	-41	NA	12631741	12643010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12631805_12640160
m54284U_201203_174622/129567562/ccs	chr2	-	3600	18	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	693.572158538927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627449	103597451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103618482_103618549_103627075
m54284U_201203_174622/129631539/ccs	chr8	+	1171	9	NIC	ENSMUSG00000031521.6	novel	2250	10	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	23	junction_6	114.178314490975	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTGTCTACTTCCTT	NA	False	NA	22	True	AATAAA	-16	NA	53964832	53976456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972005_53973271_53973380_53974084_53974219_53976210
m54284U_201203_174622/12976144/ccs	chr7	+	175	1	Intergenic	novelGene_3713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGAAAGAAAGAGAGGG	NA	False	NA	NA	False	NA	NA	NA	26802951	26803126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_26803000_26803100
m54284U_201203_174622/129763729/ccs	chr1	-	2425	9	NIC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	0	-1090	intron_retention	FALSE	canonical	3	484	junction_1	34.797404716444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCGGTGTGTGGCTCT	NA	False	NA	-21	True	TATAAA	-24	NA	36749028	36738284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
m54284U_201203_174622/12977008/ccs	chr5	-	2587	18	NIC	ENSMUSG00000006641.13	novel	3078	18	NA	NA	0	349	combination_of_known_junctions	FALSE	canonical	3	63	junction_17	22.1293773649543	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGGGTGGCATTTGA	803	False	NA	NA	False	AATAAA	-11	NA	31205353	31193881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31205309
m54284U_201203_174622/12978069/ccs	chr17	+	1711	5	ISM	ENSMUSG00000036036.16	ENSMUST00000089968.13	1991	6	1391	0	0	0	3prime_fragment	FALSE	canonical	3	426	junction_1	1230.59345439507	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316950_37317087_37320310
m54284U_201203_174622/129826923/ccs	chr13	+	3841	25	NIC	ENSMUSG00000021686.7	novel	4021	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_20	88.6492385754102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTCTCCTAATCCTTAC	NA	False	NA	9	True	AATAAA	-19	NA	94495467	94702825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
m54284U_201203_174622/129894664/ccs	chr7	+	6014	11	NIC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	4757	junction_6	549.833829443042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510361	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28514621_28514704_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
m54284U_201203_174622/129894960/ccs	chr4	-	5685	16	NIC	ENSMUSG00000028809.17	novel	3797	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	283	junction_5	254.753388375678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135074169_135074425_135074516_135080407
m54284U_201203_174622/129895233/ccs	chr14	+	2913	12	NIC	ENSMUSG00000034327.18	novel	3157	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	33.5164940275803	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTTCTGCTCTTGCT	NA	False	NA	10	True	AATAAA	-22	NA	67953588	67979610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
m54284U_201203_174622/129957912/ccs	chr2	-	4816	11	NNC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	8888	-1150	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	27.7676070268938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGTCCGTGGTCTGATT	NA	False	NA	-1	True	AGTAAA	-25	NA	153363003	153250535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153362884
m54284U_201203_174622/130025779/ccs	chr15	+	3639	7	NIC	ENSMUSG00000036167.17	novel	1154	8	NA	NA	0	403	combination_of_known_splicesites	FALSE	canonical	3	68	junction_5	39.6722685120083	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296230	93389794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
m54284U_201203_174622/130091191/ccs	chr1	-	4479	15	NIC	ENSMUSG00000026103.15	novel	5596	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	64.5226190366366	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTTTTTTTTAATA	NA	False	NA	0	True	AATAAA	-16	NA	52272391	52224438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_52227013_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
m54284U_201203_174622/130091640/ccs	chrX	+	2212	9	NIC	ENSMUSG00000031154.16	novel	2543	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_1	132.334566534976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAACAAATCAAAAAGAATA	NA	False	NA	NA	False	ATTAAA	-21	NA	7708320	7741099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
m54284U_201203_174622/130091781/ccs	chr11	+	7228	1	Genic_Genomic	ENSMUSG00000037857.17	novel	NA	NA	NA	NA	23138	5225	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTGTTTGTGGGTTT	NA	False	NA	12	True	AATAAA	-15	NA	77601564	77608792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_77601600_77608800
m54284U_201203_174622/130156334/ccs	chr15	+	3600	15	NNC	ENSMUSG00000058655.10	novel	3854	15	NA	NA	59	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	225.328841329054	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTAATGTTGCAGTTTAT	NA	False	NA	49	True	AATAAA	-19	NA	101982357	102005608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001531_102002092_102002149_102003106_102003213_102003411_102003485_102003687
m54284U_201203_174622/130221482/ccs	chr12	+	2273	15	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	27	junction_13	41.0915478672007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGTTCATAACTATTTT	NA	False	NA	NA	False	ATTAAA	-33	NA	111725282	111773160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111772441_111772509_111772748
m54284U_201203_174622/130221628/ccs	chr11	+	9151	55	NIC	ENSMUSG00000020532.19	novel	9026	54	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_50	39.807290417339	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCGTTTGTCATTTCAA	NA	False	NA	12	True	AATAAA	-20	NA	84070656	84292477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
m54284U_201203_174622/130222474/ccs	chr16	+	2005	12	NNC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	380	junction_11	564.272309855287	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931212_22931916
m54284U_201203_174622/130286670/ccs	chr7	+	2546	7	NIC	ENSMUSG00000074071.12	novel	2815	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	52.588813766174	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGGACTTTCAAGGT	NA	False	NA	53	True	AATAAA	-24	NA	67925742	68012835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_67925790_67950580_67950712_67954299_67954400_67999981_68000165_68003356_68003492_68007932_68008037_68010989
m54284U_201203_174622/130287785/ccs	chr15	-	3034	14	NNC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15.5323674264364	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGATCTTTTAATTTGTA	2674	False	NA	2	True	ATTAAA	-24	NA	58953909	58815090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_58815980_58817165_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
m54284U_201203_174622/130352233/ccs	chr11	+	2150	13	NIC	ENSMUSG00000025156.18	novel	2000	14	NA	NA	-80	0	intron_retention	FALSE	canonical	3	121	junction_6	368.90569217921	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1554	False	NA	2	True	ATTAAA	-19	NA	120675260	120679928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
m54284U_201203_174622/13041696/ccs	chr4	+	4305	12	NIC	ENSMUSG00000040945.14	novel	3767	13	NA	NA	0	-1750	intron_retention	FALSE	canonical	3	3313	junction_2	515.138334947256	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTTGTATTTCTTT	2381	False	NA	13	True	NA	NA	NA	140428783	140448781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_140428962_140429457_140429747_140435261_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
m54284U_201203_174622/130483883/ccs	chr12	+	8023	28	NIC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	118	junction_21	18.2748412215681	118	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTTTCTTTAGCATGA	NA	False	NA	7	True	AATAAA	-15	NA	4967406	5097394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
m54284U_201203_174622/130547949/ccs	chr7	-	5043	8	NIC	ENSMUSG00000030509.18	novel	4928	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_5	27.0539898600362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAATTTGTGTTTTCTT	NA	False	NA	-2	True	ATTAAA	-32	NA	66339295	66294312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_66297674_66309397_66310004_66327904_66327994_66328827_66329090_66331452_66331557_66337631_66337707_66338570_66338669_66338847
m54284U_201203_174622/130744478/ccs	chr17	+	7335	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_28	88.5754409579478	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
m54284U_201203_174622/130744530/ccs	chr12	-	6357	28	NIC	ENSMUSG00000041415.12	novel	9851	27	NA	NA	-141	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_26	53.666423842203	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAACTCTTTGGAACTA	4269	False	NA	-41	True	AATAAA	-14	NA	104718352	104657701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_104658018_104658385_104658462_104658561_104658725_104660736_104661006_104662532_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104705041_104705108_104718006
m54284U_201203_174622/130746949/ccs	chr7	-	192	1	Intergenic	novelGene_3933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAGTAAAATGT	NA	False	NA	NA	False	NA	NA	NA	81465414	81465222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_81465200_81465400
m54284U_201203_174622/130877992/ccs	chr18	+	5865	6	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	0	1773	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	92.1194876234122	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACACGAAGGTGTCGTCT	NA	False	NA	10	True	ATTAAA	-17	NA	82935878	83021598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_82935974_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
m54284U_201203_174622/130941103/ccs	chr2	-	868	8	NIC	ENSMUSG00000039128.14	novel	600	7	NA	NA	0	-118	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	373.173538445478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAATTGATTCTGGAGTT	NA	False	NA	NA	False	AATATA	-16	NA	5849752	5814483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_5814830_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
m54284U_201203_174622/130943709/ccs	chr13	-	3654	20	NIC	ENSMUSG00000021693.21	novel	3533	22	NA	NA	0	675	combination_of_known_junctions	FALSE	canonical	3	22	junction_15	27.307624781206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAAATAATGTACTTCA	NA	False	NA	0	True	AATAAA	-19	NA	107158622	107097092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
m54284U_201203_174622/131007747/ccs	chr15	-	2794	13	NIC	ENSMUSG00000022353.11	novel	4938	15	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	20.5324945716134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGATCTTTTAATTTGTA	2674	False	NA	2	True	ATTAAA	-24	NA	58953909	58815090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_58815980_58817210_58817374_58817694_58817869_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
m54284U_201203_174622/131007869/ccs	chr11	+	4425	23	NIC	ENSMUSG00000017119.21	novel	4789	24	NA	NA	168	0	intron_retention	FALSE	canonical	3	23	junction_1	55.8982251082084	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	522	False	NA	21	True	AATAAA	-24	NA	101443227	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101443412_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463633_101463799_101463928_101464004_101465824_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
m54284U_201203_174622/131073995/ccs	chr4	+	2793	12	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	127.345498676074	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
m54284U_201203_174622/13108662/ccs	chrX	-	1509	11	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1072	junction_9	145.935054048025	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
m54284U_201203_174622/1311230/ccs	chr5	+	6289	10	NNC	ENSMUSG00000029381.17	novel	687	3	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	48.7444837018306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATATGGAGATTTTTGCG	NA	False	NA	17	True	AATGAA	-22	NA	93073265	93113177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_93073342_93075412_93075541_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
m54284U_201203_174622/131204953/ccs	chr6	-	1578	11	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	499	junction_1	2039.79651926363	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446874	51438100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_51438414_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
m54284U_201203_174622/131205376/ccs	chr4	+	2969	15	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	650	junction_4	52.8467653905601	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	NA	False	NA	28	True	ATTAAA	-22	NA	124923784	124949173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124947328_124947934_124948021_124948976
m54284U_201203_174622/131219/ccs	chr7	-	2860	12	NIC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	116.391402937184	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049261	105027816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
m54284U_201203_174622/1312279/ccs	chr9	+	1017	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	343.4181125101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTCTTGTGTCTGTC	2377	False	NA	42	True	TATAAA	-28	NA	21323140	21331570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21323242_21323528_21323598_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
m54284U_201203_174622/131270927/ccs	chrX	+	4678	12	NIC	ENSMUSG00000037315.16	novel	4866	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	48.0988994908553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCAGTGTGATGATT	NA	False	NA	9	True	ATTAAA	-17	NA	20292026	20386178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20292070_20295261_20295371_20326754_20326812_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
m54284U_201203_174622/131336219/ccs	chr17	+	4535	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16047	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	10.0179526351446	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	2046	False	NA	20	True	AATAAA	-25	NA	47507265	47670388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
m54284U_201203_174622/131336487/ccs	chr11	+	3661	26	NIC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_24	29.6904024896935	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3496	False	NA	14	True	AATAAA	-22	NA	85244010	85716884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825_85704892_85712847_85712939_85716027
m54284U_201203_174622/131401310/ccs	chr12	+	3312	10	NIC	ENSMUSG00000032705.10	novel	3310	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.0686165873033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTGATTGTAAATGTG	2788	False	NA	22	True	AATAAA	-19	NA	80509993	80544896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80510055_80522496_80522963_80526039_80526167_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
m54284U_201203_174622/131401738/ccs	chr14	+	3040	12	NIC	ENSMUSG00000034327.18	novel	2528	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_4	38.6107936778015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGTTTCTGCTCTTGCT	NA	False	NA	10	True	AATAAA	-22	NA	67953588	67979610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_67953631_67962006_67962129_67963775_67963820_67966098_67966196_67966672_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67971589_67971740_67975054_67975161_67975825_67975960_67977744
m54284U_201203_174622/131467897/ccs	chr14	+	1156	8	NNC	ENSMUSG00000022110.14	novel	435	2	NA	NA	7021	-136	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	572.614982660554	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACGGTGGTCTCTTTTCT	NA	False	NA	14	True	TATAAA	-17	NA	73813114	73833087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_73813214_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
m54284U_201203_174622/131533415/ccs	chr5	-	1852	3	NIC	ENSMUSG00000066551.13	novel	2838	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	5649	junction_2	1172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTGTTGTCCTTTTCATA	6764	False	NA	NA	False	AGTAAA	-18	NA	148989850	148985037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_148985724_148986536_148987562_148989709
m54284U_201203_174622/131597743/ccs	chr15	-	1175	4	Intergenic	novelGene_7764	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_3	10.1434160364686	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTCCCATCAGATCCT	NA	False	NA	NA	False	NA	NA	NA	75754364	75741182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75754245
m54284U_201203_174622/131661998/ccs	chr1	-	5560	3	NIC	ENSMUSG00000038702.7	novel	5759	2	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACGTTGTATAGTGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	111792613	111786435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_111791371_111791824_111791962_111792125
m54284U_201203_174622/131729628/ccs	chr16	+	1605	13	NIC	ENSMUSG00000022837.15	novel	2797	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	67.3747294366862	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAGTCTGAAAGCATG	NA	False	NA	15	True	NA	NA	NA	36648768	36679934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
m54284U_201203_174622/131729787/ccs	chr9	+	4693	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	101	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	61.820028925352	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108367901	108378898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372232_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
m54284U_201203_174622/13173588/ccs	chr17	-	1817	2	NNC	ENSMUSG00000036533.10	novel	2265	2	NA	NA	10320	-280	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTTATTGCAAAGTCTA	NA	False	NA	-12	True	AATATA	-17	NA	79650116	79641435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_79643146_79650009
m54284U_201203_174622/13173801/ccs	chr4	+	174	1	Intergenic	novelGene_1989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	108132703	108132877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_108132700_108132900
m54284U_201203_174622/13173911/ccs	chr14	-	3649	15	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	16.2331545339299	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_20774429_20774528_20774632_20774815_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
m54284U_201203_174622/131792957/ccs	chr12	+	3204	17	NIC	ENSMUSG00000007411.17	novel	2807	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	127.415597063311	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	736	False	NA	NA	False	ATTAAA	-21	NA	111540956	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111541536_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
m54284U_201203_174622/131793160/ccs	chrX	+	8409	28	NIC	ENSMUSG00000034480.19	novel	8439	27	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_24	24.3627140962256	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCAGTCTCTGATTCCGA	NA	False	NA	NA	False	AATAAA	-19	NA	128650544	129366583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684_129079812_129159827_129159991_129190602_129190739_129228714_129228811_129361619
m54284U_201203_174622/131794875/ccs	chrX	-	2077	10	NIC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	0	-801	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	11.2940495640649	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253144	36179484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_36180199_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
m54284U_201203_174622/131795772/ccs	chr4	-	189	1	Intergenic	novelGene_1790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTGCTTCTCCTCAA	NA	False	NA	NA	False	NA	NA	NA	33447843	33447654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_33447700_33447800
m54284U_201203_174622/131860961/ccs	chr3	+	1946	9	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	87	0	intron_retention	FALSE	canonical	3	1030	junction_1	86.1434124004848	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066179	97083834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_97066682_97073158_97073288_97073389_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
m54284U_201203_174622/132187416/ccs	chr17	+	2507	8	NNC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	222.120210145547	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5538	False	NA	12	True	AATAAA	-23	NA	34128387	34134564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34128468_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
m54284U_201203_174622/132254025/ccs	chr6	+	4348	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	0	-262	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	67.396834742689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	6	True	TATAAA	-19	NA	128339929	128352847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349493_128349567_128349739
m54284U_201203_174622/132254035/ccs	chr18	-	5158	22	NNC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_16	43.7465385737913	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAGCCTGTTCAATGCT	5824	False	NA	-5	True	AATAAA	-29	NA	61310122	61264348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61292229_61292285_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
m54284U_201203_174622/132280/ccs	chr16	+	2951	6	NNC	ENSMUSG00000022883.12	novel	6601	29	NA	NA	17394	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	19.2727787306346	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCCTTCCTTGTGTTGAT	NA	False	NA	NA	False	ATTAAA	-17	NA	72820702	72842983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_72820840_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
m54284U_201203_174622/132317378/ccs	chr12	-	8907	43	NNC	ENSMUSG00000035247.17	novel	8988	43	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_16	34.7562617728993	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACCTGTGTCGTGTTAC	NA	False	NA	-5	True	ATTAAA	-14	NA	51876385	51790504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810809_51810938_51814338_51814561_51815311_51816008_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
m54284U_201203_174622/13240562/ccs	chr17	+	5457	22	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	0	60036	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	40.3432550904425	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGGTTGCAAGTCCT	9439	False	NA	16	True	AATAAA	-10	NA	3165246	3309170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
m54284U_201203_174622/132448676/ccs	chr11	-	2539	14	NNC	ENSMUSG00000013415.10	novel	8378	15	NA	NA	-145	-2292	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_4	127.902514652519	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATTGTATCTGTTCTTC	NA	False	NA	NA	False	CATAAA	-18	NA	95896911	95856553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_95857117_95857476_95857609_95858374_95858450_95859188_95859306_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
m54284U_201203_174622/132515967/ccs	chr14	-	3040	13	NIC	ENSMUSG00000021816.12	novel	3831	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_11	69.3253200497481	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	NA	False	NA	-1	True	AATAAA	-25	NA	20596641	20550097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581727_20581929_20596423
m54284U_201203_174622/132581445/ccs	chr13	+	1290	11	NIC	ENSMUSG00000021692.10	novel	2051	12	NA	NA	0	-840	intron_retention	FALSE	canonical	3	551	junction_5	39.2372272210971	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTAGTGTTTTATATATA	NA	False	NA	15	True	NA	NA	NA	107083662	107095428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
m54284U_201203_174622/132646931/ccs	chr7	+	2048	11	NIC	ENSMUSG00000030435.17	novel	2088	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	709.612824010389	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATCCTCATCTGTGTCCA	35	False	NA	33	True	ATTAAA	-23	NA	5065243	5082937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_5065336_5069401_5069538_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
m54284U_201203_174622/132647504/ccs	chr3	+	2165	6	NIC	ENSMUSG00000005687.15	novel	2717	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	3786	junction_4	89.7850767109991	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTGGCTATAG	5023	False	NA	48	True	AATAAA	-16	NA	103079064	103086143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103082986_103084654_103084736_103085670
m54284U_201203_174622/132711611/ccs	chr1	-	491	4	NNC	ENSMUSG00000101549.2	novel	359	4	NA	NA	1956	6205	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_1	10.077477638554	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATAACCCTTCTTAATT	NA	False	NA	-3	True	AATAAA	-15	NA	132206193	132196248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_132196405_132202453_132202560_132202761_132202875_132206077
m54284U_201203_174622/132712278/ccs	chr12	+	1892	6	NNC	ENSMUSG00000033373.17	novel	384	2	NA	NA	-7291	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	113.544000281829	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	NA	False	NA	14	True	AATAAA	-15	NA	76948968	76968186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_76949034_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
m54284U_201203_174622/132777981/ccs	chr12	-	1246	2	Intergenic	novelGene_6847	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTCTCAATTATTC	NA	False	NA	NA	False	AAAAAG	-40	NA	100147235	100145848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_100146935_100147075
m54284U_201203_174622/132841666/ccs	chr2	+	7401	14	NIC	ENSMUSG00000039046.16	novel	7484	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	34.0551241267734	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGATGCAGCCTTGACTTA	4654	False	NA	10	True	ATTAAA	-20	NA	6327477	6451201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_6327766_6341178_6341271_6395865_6395934_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
m54284U_201203_174622/132907123/ccs	chr11	-	221	1	Intergenic	novelGene_6113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTATAACTCCCTCCT	NA	False	NA	NA	False	NA	NA	NA	80321906	80321685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80321700_80321900
m54284U_201203_174622/132908292/ccs	chr2	+	4764	15	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	193	junction_2	195.382630878437	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
m54284U_201203_174622/13304529/ccs	chr2	-	6533	17	NIC	ENSMUSG00000035093.17	novel	6797	18	NA	NA	85	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_16	17.9041501822901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTTCTTTTTCTAT	389	False	NA	NA	False	AATAAA	-36	NA	125624705	125578905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125624518
m54284U_201203_174622/13306117/ccs	chr11	-	182	1	Intergenic	novelGene_6245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAATAAGTATTAA	NA	False	NA	NA	False	NA	NA	NA	95947356	95947174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95947200_95947400
m54284U_201203_174622/133103649/ccs	chr7	-	2086	8	NIC	ENSMUSG00000053175.18	novel	1850	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	615	junction_1	42.8009154965982	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGCTTTCCATCTGTT	5729	False	NA	-8	True	AATAAA	-17	NA	19556695	19542386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19542982_19543066_19543589_19544981_19545060_19545244_19545334_19545419_19545625_19546329_19546439_19553971_19554126_19556361
m54284U_201203_174622/133103938/ccs	chr5	-	2709	10	NIC	ENSMUSG00000039753.17	novel	2858	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	179.02389660477	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTGTTGTGATTT	8828	False	NA	-1	True	AATAAA	-28	NA	43939492	43901957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
m54284U_201203_174622/133169317/ccs	chr12	-	5011	15	NIC	ENSMUSG00000041846.16	novel	4516	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_4	195.276217242162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTAATTGTATGTTTC	8772	False	NA	-24	True	AATAAA	-25	NA	101049961	101005770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_101007039_101008083_101008905_101009701_101009845_101010748_101010919_101011784_101011941_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
m54284U_201203_174622/133169332/ccs	chr7	+	2092	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	614	junction_1	1512.5697412755	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510361	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_28510594_28512706_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
m54284U_201203_174622/133237105/ccs	chr2	+	8609	30	NIC	ENSMUSG00000039262.17	novel	8612	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	283	junction_29	60.7166476024171	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6650	False	NA	24	True	AATAAA	-40	NA	32041093	32124549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
m54284U_201203_174622/133237531/ccs	chr6	+	2004	1	Intergenic	novelGene_3336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCGTGTAATCTGTCT	NA	False	NA	NA	False	NA	NA	NA	79611010	79613014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_79611000_79613000
m54284U_201203_174622/133237552/ccs	chr5	+	1491	9	NIC	ENSMUSG00000035297.15	novel	1755	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	458.433184199181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTCTATTCCTTTT	5421	False	NA	43	True	AATAAA	-45	NA	100666322	100695669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100691704_100691790_100695169
m54284U_201203_174622/133300301/ccs	chr2	+	2634	12	NNC	ENSMUSG00000040282.14	novel	2770	11	NA	NA	0	-182	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	116.799821691248	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCCTAAGTTACCAGT	NA	False	NA	5	True	ATTAAA	-14	NA	115412196	115609067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115579557_115579622_115607382
m54284U_201203_174622/133301444/ccs	chr11	+	4298	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	32.2787856029312	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGTTTTAAGTA	NA	False	NA	25	True	AATAAA	-33	NA	84771135	84801957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_84771338_84771615_84772080_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
m54284U_201203_174622/133301455/ccs	chr1	-	4009	3	NNC	ENSMUSG00000099032.3	novel	4193	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	6	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTGTTAACTCTGC	-20	True	NA	NA	False	AATAAA	-17	NA	10038157	10030387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_10033747_10037323_10037743_10037926
m54284U_201203_174622/133301969/ccs	chr11	-	5574	9	NIC	ENSMUSG00000034621.15	novel	6871	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_7	61.2204010114276	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATATTTGTTTTCTGCT	660	False	NA	-33	True	TATAAA	-12	NA	102447002	102368032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102422138_102422157_102429107_102429183_102446905
m54284U_201203_174622/133368065/ccs	chr3	-	2145	15	NNC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	59.4864501807096	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTATCTGTTCTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	96634792	96618838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631309_96633149_96633316_96634664
m54284U_201203_174622/133433544/ccs	chr11	+	1925	11	NNC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	109	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	60.3033166583729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCATCTGTTGGAGA	7518	False	NA	14	True	AATAAA	-16	NA	102284337	102293381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_102284609_102288396_102288513_102288922_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
m54284U_201203_174622/133562538/ccs	chr6	+	1392	9	NIC	ENSMUSG00000029848.12	novel	1455	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	25.8202924073295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTTGGTGTCCTGGCA	NA	False	NA	11	True	TATAAA	-16	NA	34897894	34916277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_34897990_34904653_34904789_34907295_34907372_34907817_34907903_34909932_34910221_34911014_34911301_34912517_34912592_34914967_34915080_34916036
m54284U_201203_174622/133563633/ccs	chr2	+	2721	7	NNC	ENSMUSG00000028640.12	novel	2838	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	217.157904658236	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGTTCTGACCCTT	NA	False	NA	22	True	AATAAA	-24	NA	172391512	172400539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_172391803_172393326_172393810_172393915_172393968_172395335_172395553_172395960_172396080_172397984_172398130_172399124
m54284U_201203_174622/133564404/ccs	chr11	+	1014	5	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_4	247.637335634189	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96698628
m54284U_201203_174622/133695431/ccs	chr12	+	3358	14	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_3	99.633945404782	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201203_174622/133696041/ccs	chr11	-	3122	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_13	519.016742213799	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615208
m54284U_201203_174622/13369796/ccs	chr14	+	187	1	Intergenic	novelGene_7472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGATGGCAGATTCTTA	6073	False	NA	NA	False	NA	NA	NA	55891185	55891372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_55891200_55891400
m54284U_201203_174622/13370507/ccs	chr5	+	2406	16	NIC	ENSMUSG00000029521.8	novel	2276	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	67.6591457232502	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTTTGTTGTGGCTTTTC	9199	False	NA	31	True	AAAACA	-7	NA	110987865	111022011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110987915_110988276_110988407_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
m54284U_201203_174622/13371701/ccs	chrX	-	174	1	Intergenic	novelGene_9572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	101247770	101247596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_101247600_101247800
m54284U_201203_174622/13371937/ccs	chr9	-	190	1	Intergenic	novelGene_4739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTCAAAATAAGACCATCT	3644	False	NA	NA	False	NA	NA	NA	44522865	44522675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_44522700_44522900
m54284U_201203_174622/133759266/ccs	chr5	+	12072	49	NIC	ENSMUSG00000040407.19	novel	13123	48	NA	NA	0	-1105	intron_retention	TRUE	canonical	3	19	junction_3	16.1909048328238	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTGAACCTTCTTGAT	NA	False	NA	23	True	AATAAA	-25	NA	3978273	4130205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_3978491_3998680_3998897_4001689_4001735_4004396_4004451_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
m54284U_201203_174622/133760000/ccs	chr4	+	3242	24	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	40.9493208845687	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	3337	False	NA	11	True	AATAAA	-21	NA	137392036	137457172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137392156_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
m54284U_201203_174622/133827299/ccs	chr3	+	1432	11	NIC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	53	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	1019.91249134423	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATCTCATTTTAAAAT	NA	False	NA	16	True	AATAAA	-15	NA	79498724	79510583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_79498865_79500916_79501058_79502508_79502616_79503398_79503506_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
m54284U_201203_174622/133892783/ccs	chr13	-	202	1	Intergenic	novelGene_6987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCCTTCTGAGGTAG	1025	False	NA	NA	False	AAAACA	-29	NA	21452712	21452510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_21452500_21452700
m54284U_201203_174622/133958323/ccs	chr11	-	3988	15	NNC	ENSMUSG00000061306.17	novel	4052	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	180.697924160513	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	5020	False	NA	-12	True	AATAAA	-12	NA	120042148	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025705_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
m54284U_201203_174622/133958412/ccs	chr9	+	1392	9	NIC	ENSMUSG00000002825.9	novel	1316	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	687	junction_5	69.0261499360931	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGCTCTTGTGTCTGTC	2369	False	NA	42	True	TATAAA	-28	NA	21323132	21331570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21331009_21331331
m54284U_201203_174622/134023776/ccs	chr2	-	221	1	Intergenic	novelGene_1061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCGGGCATGGTGGCGCA	NA	False	NA	NA	False	NA	NA	NA	128439469	128439248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_128439200_128439500
m54284U_201203_174622/134088238/ccs	chr9	-	169	1	Intergenic	novelGene_4905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGTGACTGAA	NA	False	NA	NA	False	NA	NA	NA	66979496	66979327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66979300_66979500
m54284U_201203_174622/134089366/ccs	chr10	+	2454	16	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	250.794417800716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171916	21244797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_21172076_21175076_21175143_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
m54284U_201203_174622/134154724/ccs	chr7	+	2318	16	NIC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	77.3601677580624	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGAAGTGCTGGCTG	268	False	NA	25	True	AATAAA	-33	NA	28441416	28453296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28441708_28443666_28443763_28443985_28444145_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
m54284U_201203_174622/134284813/ccs	chr11	-	5559	19	NNC	ENSMUSG00000020687.14	novel	5425	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	108	junction_8	36.3123027820232	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATAATCAAGGTGTTAA	2066	False	NA	-32	True	AATAAA	-16	NA	104441446	104393570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
m54284U_201203_174622/134285309/ccs	chr10	+	1998	8	NNC	ENSMUSG00000019810.16	novel	2007	8	NA	NA	0	85	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	52.8471032936585	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTATAATATTTTAGT	NA	False	NA	14	True	AATACA	-24	NA	13376827	13391372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390608_13390860
m54284U_201203_174622/13435582/ccs	chr5	+	1111	5	NIC	ENSMUSG00000029149.15	novel	1027	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_4	24.701973605362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATTACAGTTACTTG	NA	False	NA	9	True	AATAAA	-21	NA	31409034	31410546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31409448_31409535_31409596_31409708_31410134_31410238_31410347_31410441
m54284U_201203_174622/134414405/ccs	chr6	-	5819	6	NNC	ENSMUSG00000051343.12	novel	6119	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_3	44.0817422523203	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTGTGTGTTTGTT	NA	False	NA	-2	True	AATAAA	-16	NA	85351616	85311948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_85314209_85314462_85314653_85317324_85319044_85324761_85325438_85325536_85325974_85351079
m54284U_201203_174622/134547728/ccs	chr10	-	2240	8	NIC	ENSMUSG00000034748.17	novel	1891	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_7	72.5548349983146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGTTACATTTATGTA	9889	False	NA	-11	True	AATAAA	-25	NA	81463400	81457620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81462725
m54284U_201203_174622/134548209/ccs	chr7	+	190	1	Intergenic	novelGene_3715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAAAAGGATATGTTCT	NA	False	NA	NA	False	NA	NA	NA	26947869	26948059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_26947900_26948100
m54284U_201203_174622/134613027/ccs	chr5	+	190	1	Intergenic	novelGene_2972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAAGCATTTTGCTCT	NA	False	NA	NA	False	NA	NA	NA	135076924	135077114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_135076900_135077100
m54284U_201203_174622/134809422/ccs	chr7	+	3226	18	NIC	ENSMUSG00000030374.16	novel	3535	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	123.928766234261	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTCCAGGCCATCTG	NA	False	NA	16	True	AATAAA	-16	NA	16550241	16574856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565270_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
m54284U_201203_174622/134874297/ccs	chr1	-	189	1	Intergenic	novelGene_544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAAATGAACAGAATTTA	NA	False	NA	NA	False	NA	NA	NA	189591789	189591600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_189591600_189591800
m54284U_201203_174622/134874530/ccs	chr1	-	995	4	NIC	ENSMUSG00000026239.15	novel	1159	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	164.641698511917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGCATGCCGATGCTTCC	NA	False	NA	-11	True	ATTAAA	-15	NA	86510239	86470743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_86471306_86474378_86474505_86475250_86475340_86510021
m54284U_201203_174622/134874827/ccs	chr7	-	4067	6	NIC	ENSMUSG00000002635.12	novel	1295	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	713	junction_1	37.7232024091275	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTGTTTACCTTAT	5732	False	NA	NA	False	ATTAAA	-20	NA	33896086	33884057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33884237_33885718_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
m54284U_201203_174622/134939942/ccs	chr17	-	5250	26	NIC	ENSMUSG00000014426.10	novel	5441	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_25	52.5607305885297	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGTCTGTTACTGGCT	NA	False	NA	1	True	AATAAA	-23	NA	12537683	12446507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12537384
m54284U_201203_174622/134940287/ccs	chr9	+	2971	13	NIC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	272	junction_2	35.6825315183152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGCTCTGGCTGTATA	NA	False	NA	13	True	AATAAA	-14	NA	107828165	107848724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107828372_107833063_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
m54284U_201203_174622/134940669/ccs	chr15	-	1868	10	NIC	ENSMUSG00000022453.9	novel	1913	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	84.6325390536445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGTACTATGACCTG	1363	False	NA	0	True	AATAAA	-31	NA	82223008	82213732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221698_82222438_82222516_82222952
m54284U_201203_174622/135006951/ccs	chr3	-	4284	17	NIC	ENSMUSG00000028078.15	novel	4012	16	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	86.6048632800145	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGGGTGGGTGAAATT	NA	False	NA	-3	True	AATAAA	-20	NA	86828252	86693459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_86694720_86696618_86696798_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723741_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
m54284U_201203_174622/13500940/ccs	chr10	+	1378	8	NIC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	1905.46497619615	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899472	126903166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_126899629_126900070_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
m54284U_201203_174622/13502029/ccs	chr8	-	2086	12	NIC	ENSMUSG00000002949.16	novel	1790	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	458	junction_5	35.7830931036728	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAACGGTTTGAAGTGT	NA	False	NA	-13	True	AATAAA	-22	NA	4325913	4309730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
m54284U_201203_174622/135071169/ccs	chr2	-	4348	11	NIC	ENSMUSG00000034075.11	novel	4706	12	NA	NA	65	-171	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	91.0773846791837	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCCCCCTGACTTGTG	NA	False	NA	-6	True	AATAAA	-17	NA	84545459	84518484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84540661_84541817_84545326
m54284U_201203_174622/135071989/ccs	chr8	+	2052	3	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	2963	junction_1	132.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71126108_71129204_71130785_71131009
m54284U_201203_174622/135072413/ccs	chr18	-	192	1	Intergenic	novelGene_8846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGGCATGTATTATTAT	NA	False	NA	NA	False	NA	NA	NA	25099386	25099194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_25099200_25099400
m54284U_201203_174622/135137688/ccs	chr2	+	2388	9	NNC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	418.47772864873	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8569	False	NA	NA	False	AATAAA	-16	NA	72306502	72317237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313870_72314222_72314361_72314942_72315093_72315519_72315657_72316063
m54284U_201203_174622/135266627/ccs	chr9	+	2260	6	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_4	226.796825374607	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198865	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59221035_59221135_59222016
m54284U_201203_174622/135266827/ccs	chr2	-	7773	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_34	50.1518184910496	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	NA	False	NA	-4	True	AATAAA	-19	NA	59956084	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59907213_59907256_59955806
m54284U_201203_174622/135267802/ccs	chr17	+	5501	12	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	97.2670346677529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004407	29057518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29004515_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29054735_29054891_29055483
m54284U_201203_174622/135332181/ccs	chr18	-	1797	17	NNC	ENSMUSG00000047879.18	novel	4726	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	213.072015041277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACTTGATTATACACT	0	True	NA	-65	True	AATAAA	-15	NA	10030081	9995593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_9995730_9996070_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
m54284U_201203_174622/135399796/ccs	chr15	+	2206	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	197	junction_5	31.0741049750431	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	4826	False	NA	24	True	AATAAA	-27	NA	76215543	76219107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76215664_76216095_76216276_76216359_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
m54284U_201203_174622/135463001/ccs	chr5	+	2527	6	NNC	ENSMUSG00000032840.8	novel	5649	5	NA	NA	0	-2981	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_5	61.1339512873166	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTGTGGAATGTGG	1639	False	NA	7	True	NA	NA	NA	118383291	118401177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164_118399994_118400134
m54284U_201203_174622/135464645/ccs	chr12	-	1760	1	FSM	ENSMUSG00000066632.4	ENSMUST00000085735.4	1255	1	-73	-432	-73	432	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCCATCCATAAACTGAA	NA	False	NA	NA	False	AATAAA	-29	NA	10950313	10948553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_10948600_10950300
m54284U_201203_174622/135464989/ccs	chr4	+	2889	16	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	149.780936333329	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5272	False	NA	21	True	NA	NA	NA	108436650	108472030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108436773_108445872_108445979_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
m54284U_201203_174622/135530542/ccs	chr7	-	2960	8	NIC	ENSMUSG00000030583.17	novel	2660	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	14.6844357420101	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTTCTCCTGCAGC	1021	False	NA	-1	True	AATAAA	-17	NA	29041293	29019796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030967_29031649_29031816_29038380_29038603_29041243
m54284U_201203_174622/135530817/ccs	chr3	+	6907	17	NIC	ENSMUSG00000027630.14	novel	8237	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	65.5017890977033	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGCTGTGTACATATAT	NA	False	NA	17	True	AATAAA	-17	NA	22130815	22269457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_22131119_22157030_22157112_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
m54284U_201203_174622/135791270/ccs	chr6	+	2326	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	163.040383545509	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	13	True	NA	NA	False	NA	NA	NA	30048027	30140903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
m54284U_201203_174622/135858687/ccs	chr11	+	3442	10	NIC	ENSMUSG00000019189.14	novel	3570	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	114.049155527532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGTATTCCTGTGATGT	9746	False	NA	12	True	AATAAA	-18	NA	44409809	44456347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_44410102_44415754_44415971_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
m54284U_201203_174622/135923516/ccs	chr17	+	4668	24	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_23	47.6055389066606	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56633230_56651333_56651443_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
m54284U_201203_174622/135924449/ccs	chr11	+	185	1	Intergenic	novelGene_6078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGTTTTTGGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	79184141	79184326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79184100_79184300
m54284U_201203_174622/136120753/ccs	chr4	+	4503	15	NIC	ENSMUSG00000028412.18	novel	4382	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_3	96.5243968314409	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTATGTGTGTAACCAT	-33	True	NA	33	True	AATAAA	-33	NA	53440412	53567818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_53440717_53481463_53481554_53491387_53491531_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
m54284U_201203_174622/136185707/ccs	chr9	+	3603	11	NIC	ENSMUSG00000036138.17	novel	3668	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	245	junction_2	25.0047995392885	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGTCATTTCCTTCA	7848	False	NA	28	True	AGTAAA	-19	NA	119170479	119179365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
m54284U_201203_174622/136185744/ccs	chr12	-	1727	2	NIC	ENSMUSG00000073158.5	novel	2245	4	NA	NA	0	-330	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATATCTATAGATGTTAA	NA	False	NA	NA	False	AGTAAA	-23	NA	24147247	24093532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_24094856_24146843
m54284U_201203_174622/136251008/ccs	chr5	+	7157	45	NIC	ENSMUSG00000013629.17	novel	7137	44	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_35	184.37253850437	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTCGTCATGAGTACT	7084	False	NA	18	True	AATAAA	-14	NA	31212154	31235823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31232814_31232866_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
m54284U_201203_174622/136314895/ccs	chr11	-	3063	6	NNC	ENSMUSG00000020946.14	novel	3266	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_4	130.003076886665	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGGCATTCTTTGTCT	NA	False	NA	2	True	AATAAA	-31	NA	103588524	103567674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578457_103580080_103580146_103588455
m54284U_201203_174622/136315000/ccs	chr2	-	187	1	Intergenic	novelGene_1083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCGGGTGTGATGTGGCA	NA	False	NA	NA	False	NA	NA	NA	132535810	132535623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_132535600_132535800
m54284U_201203_174622/13632071/ccs	chrX	+	8662	22	NIC	ENSMUSG00000034160.14	novel	3840	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_1	134.119671069536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTGGTGTAGTTTGT	NA	False	NA	15	True	AATAAA	-20	NA	100683669	100727957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100683717_100683823_100683929_100686611_100686763_100687552_100687797_100695745_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
m54284U_201203_174622/13632668/ccs	chr6	+	2561	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_5	481.083798627407	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829749_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201203_174622/13633808/ccs	chr2	-	2790	7	NIC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_5	8.47381587925744	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	3964	False	NA	-13	True	AATAAA	-15	NA	32872080	32863001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32863745_32864849_32864996_32865325_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
m54284U_201203_174622/136380649/ccs	chr8	+	5333	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	83.7517014752536	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443037	3506601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_3443103_3476497_3476560_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
m54284U_201203_174622/136512799/ccs	chr6	-	2259	1	Antisense	novelGene_ENSMUSG00000009112.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120849258	120846999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_120847000_120849300
m54284U_201203_174622/136514304/ccs	chr3	-	175	1	Intergenic	novelGene_1550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATATAAAAAAAGAAATGTC	NA	False	NA	NA	False	NA	NA	NA	93487912	93487737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_93487700_93487900
m54284U_201203_174622/136577448/ccs	chr5	+	564	4	NNC	ENSMUSG00000106918.4	novel	638	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	962.363179308565	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771328	31779986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_31771501_31771946_31771966_31773724_31773832_31779720
m54284U_201203_174622/136578374/ccs	chr11	+	1109	6	NNC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	106.202448182704	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933280	71938196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937916
m54284U_201203_174622/136579804/ccs	chr13	-	3244	16	NIC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_12	158.040360527163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTTGAGGTGTTATTT	NA	False	NA	NA	False	AATAAA	-13	NA	93328893	93282790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93313602_93313767_93320586_93320825_93322315_93322406_93322810_93322985_93328601
m54284U_201203_174622/136642907/ccs	chr7	-	198	1	Antisense	novelGene_ENSMUSG00000030801.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACTAGGGGCGAGAGA	NA	False	NA	NA	False	NA	NA	NA	127513602	127513404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_127513400_127513600
m54284U_201203_174622/136643499/ccs	chr5	+	866	4	NNC	ENSMUSG00000034211.15	novel	832	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	348.312439564761	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCAGCTTGATTTT	791	False	NA	23	True	CATAAA	-12	NA	129792597	129795544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_129792614_129792747_129792893_129793790_129793931_129794979
m54284U_201203_174622/136644990/ccs	chr12	-	195	1	Intergenic	novelGene_6811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGCACCACCACTATCT	NA	False	NA	NA	False	NA	NA	NA	85442239	85442044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85442000_85442200
m54284U_201203_174622/136710549/ccs	chr8	-	5208	22	NIC	ENSMUSG00000058301.9	novel	4618	24	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	123.649126871012	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTTTGCGTGGGG	NA	False	NA	-29	True	AATAAA	-14	NA	70805928	70784174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
m54284U_201203_174622/136710920/ccs	chr9	-	193	1	Intergenic	novelGene_4926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGCAGATTACAATATGAA	NA	False	NA	NA	False	NA	NA	NA	72359700	72359507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72359500_72359700
m54284U_201203_174622/136774497/ccs	chr8	+	1295	5	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	0	1286	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	2971.81930810068	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57965007	57967529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_57965282_57965612_57965783_57966095_57966242_57966323_57966499_57966999
m54284U_201203_174622/136841337/ccs	chr11	+	6806	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-156	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	170.368817424484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899733	57952860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940489_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
m54284U_201203_174622/136842068/ccs	chr7	-	2359	17	NIC	ENSMUSG00000002968.10	novel	2287	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	220.824086874032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6948	False	NA	-13	True	AATAAA	-10	NA	44541843	44528814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541568
m54284U_201203_174622/136907164/ccs	chr6	+	5856	1	FSM	ENSMUSG00000107502.2	ENSMUST00000203184.2	3527	1	1020	-3349	1020	3349	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	97126174	97132030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_97126200_97132000
m54284U_201203_174622/136970565/ccs	chr16	-	4340	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	632	junction_4	191.240629561455	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
m54284U_201203_174622/136970932/ccs	chr13	+	4409	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	546	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	296.576735432839	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51255461	51306582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_51255548_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
m54284U_201203_174622/13697588/ccs	chr4	+	4270	25	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	83.527274321359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-5	True	NA	NA	False	ATTAAA	-23	NA	24496461	24602950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_24496635_24496831_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
m54284U_201203_174622/13697904/ccs	chr8	-	3808	9	NNC	ENSMUSG00000031586.18	novel	2547	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	559.605650771148	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTTAAGAAATGTGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	34419869	34274091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_34276896_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
m54284U_201203_174622/13698973/ccs	chr3	+	1530	6	NIC	ENSMUSG00000028124.16	novel	5589	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_5	186.5576586474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTGTGTGTTCTTGC	NA	False	NA	16	True	AATAAA	-28	NA	122039360	122060592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122059876
m54284U_201203_174622/13699165/ccs	chr18	-	1199	1	Intergenic	novelGene_8863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTGACTATGCAAG	NA	False	NA	NA	False	NA	NA	NA	34141905	34140706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34140700_34141900
m54284U_201203_174622/13699257/ccs	chr5	+	3104	16	NIC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_8	15.4324333790883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCAGTGGTGGCACATGC	8700	False	NA	14	True	AATAAA	-19	NA	142449808	142463557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
m54284U_201203_174622/137101431/ccs	chr8	+	2009	10	NIC	ENSMUSG00000038365.9	novel	2012	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_7	29.6514734295483	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTCTGCAACAAT	NA	False	NA	14	True	AATAAA	-20	NA	13957802	13990522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981184_13981365_13985145_13985290_13989562
m54284U_201203_174622/137232483/ccs	chr2	-	2922	19	NIC	ENSMUSG00000027620.17	novel	2127	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_15	935.369445727195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAATTTTCGTTTTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	156022132	155989165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156016016_156016089_156019255_156019306_156020799_156020873_156021096_156021161_156021806
m54284U_201203_174622/137233150/ccs	chr4	+	3769	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_4	135.37027410444	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
m54284U_201203_174622/137234254/ccs	chr17	+	6801	17	NNC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_16	44.6216297746956	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9390	False	NA	15	True	NA	NA	NA	36152567	36170562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354_36169469_36169838
m54284U_201203_174622/137234391/ccs	chr11	+	6982	13	NNC	ENSMUSG00000017639.14	novel	677	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	29.6014029322185	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79551387	79588849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_79551683_79571613_79571838_79574235_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
m54284U_201203_174622/137235266/ccs	chr5	+	4614	20	NIC	ENSMUSG00000015880.14	novel	3703	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	458	junction_5	42.7098696320759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTATACTCAGTATTTAT	NA	False	NA	18	True	ATTAAA	-25	NA	45827260	45857469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
m54284U_201203_174622/137298092/ccs	chr2	-	6290	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	0	-2600	combination_of_known_splicesites	FALSE	canonical	2	6	junction_44	67.162993343494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529311	128454623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128526421_128526584_128527743_128527981_128529072
m54284U_201203_174622/137298152/ccs	chr6	+	1980	13	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	276	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_11	174.270144698779	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5726	False	NA	7	True	AATAAA	-17	NA	83254374	83280734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83276591_83276676_83277452_83277521_83280307
m54284U_201203_174622/137300230/ccs	chr9	+	2236	12	NIC	ENSMUSG00000001774.9	novel	5789	11	NA	NA	0	1988	combination_of_known_junctions	FALSE	canonical	3	41	junction_7	337.819233778575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTCTGTCATGTGTTT	8540	False	NA	12	True	NA	NA	NA	18203595	18225297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18219517_18219581_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
m54284U_201203_174622/137363822/ccs	chr7	-	5000	4	NNC	ENSMUSG00000074283.6	novel	2932	4	NA	NA	-125	2229	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	2.49443825784929	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGCGTTGTCTTGGTCA	NA	False	NA	NA	False	NA	NA	NA	23937110	23924767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_23929266_23933775_23933903_23936042_23936101_23936793
m54284U_201203_174622/137364031/ccs	chr7	+	2193	7	NIC	ENSMUSG00000030990.19	novel	2034	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	61.1201003489578	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTAGGTATGTTGCTCC	594	False	NA	16	True	AATAAA	-23	NA	101872234	101887774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101872505_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885762_101886328_101886438_101886607
m54284U_201203_174622/137430709/ccs	chr1	+	1780	6	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	176	junction_1	28.1666469427939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187491	75190886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189873_75190219_75190342_75190457
m54284U_201203_174622/137431410/ccs	chr7	-	3963	22	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	7	junction_14	366.524796301498	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28661765	28592672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
m54284U_201203_174622/137562680/ccs	chr8	+	3032	8	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_2	189.772043703567	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633577	43646918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_43633650_43635378_43635395_43636158_43636403_43636739_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
m54284U_201203_174622/13762902/ccs	chr15	-	2578	19	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	0	345	combination_of_known_junctions	FALSE	canonical	1	53	junction_16	748.683997688652	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACCTCTGTCCTCACG	NA	False	NA	-5	True	AATAAA	-18	NA	11399687	11383745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393363_11394309_11394501_11397266_11397348_11399571
m54284U_201203_174622/13764373/ccs	chr2	-	4292	30	NIC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	0	0	intron_retention	FALSE	canonical	3	212	junction_8	28.2203829153789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	False	NA	-6	True	AGTAAA	-15	NA	91794002	91763171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
m54284U_201203_174622/1377642/ccs	chr18	-	167	1	Intergenic	novelGene_8947	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATACATACATAAAT	NA	False	NA	NA	False	NA	NA	NA	46625380	46625213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_46625200_46625400
m54284U_201203_174622/1377686/ccs	chr2	-	4477	23	NIC	ENSMUSG00000026754.17	novel	4869	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_1	8.80974291610907	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTGAGTTTTACTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	38955553	38906514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955436
m54284U_201203_174622/137824727/ccs	chr5	-	174	1	Intergenic	novelGene_2629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTAAAAAAAAAGTACAAT	NA	False	NA	NA	False	NA	NA	NA	77124094	77123920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77123900_77124100
m54284U_201203_174622/1378319/ccs	chr11	-	2296	10	NIC	ENSMUSG00000037935.17	novel	2919	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_9	208.072874223562	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCAGTGTTTTTATTGC	NA	False	NA	-2	True	AATAAA	-15	NA	99121272	99099872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99121227
m54284U_201203_174622/137890344/ccs	chr4	-	3566	18	NIC	ENSMUSG00000008305.19	novel	3644	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_14	72.7398549984141	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119156	72036043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72075699_72075717_72076449_72076655_72116009_72116055_72116154_72116219_72117533_72117635_72118218
m54284U_201203_174622/138019047/ccs	chr15	+	2251	2	NNC	ENSMUSG00000044250.9	novel	1790	2	NA	NA	15477	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTCCAAAAGTGGTTC	NA	False	NA	14	True	AATAAA	-15	NA	97274574	97283561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_97275170_97281905
m54284U_201203_174622/138020089/ccs	chr11	-	2062	14	NNC	ENSMUSG00000025155.16	novel	1909	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_10	286.537459987924	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687229	120680026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684713_120685093_120685145_120685728_120685838_120686302_120686550_120686764
m54284U_201203_174622/138084595/ccs	chr15	-	1974	1	Antisense	novelGene_ENSMUSG00000022142.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAGAGAAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	8190860	8188886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_8188900_8190900
m54284U_201203_174622/138086727/ccs	chr7	-	5699	11	NIC	ENSMUSG00000044465.20	novel	10853	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	83	junction_3	98.8387069927566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTCTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	105049261	105027816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105028337_105030286_105030450_105030605_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
m54284U_201203_174622/138087165/ccs	chr1	-	202	1	Intergenic	novelGene_513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGCCTGGTCTAGAGAG	NA	False	NA	NA	False	NA	NA	NA	180610363	180610161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_180610200_180610400
m54284U_201203_174622/138150125/ccs	chr5	-	1080	6	NIC	ENSMUSG00000029446.15	novel	1733	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	439.778762561359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCAGTAGTTTTAAGTGA	NA	False	NA	-2	True	ATTAAA	-22	NA	129856277	129842621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856125
m54284U_201203_174622/138151968/ccs	chr18	+	6547	21	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	436	junction_6	87.0577394606591	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
m54284U_201203_174622/138217875/ccs	chr17	+	3811	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	102.816613040694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGATTGTTTCAGG	6670	False	NA	20	True	AATAAA	-21	NA	35117444	35133028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
m54284U_201203_174622/138218224/ccs	chr6	+	4561	13	NIC	ENSMUSG00000071337.12	novel	4326	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_8	60.6416500618364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTAAACTTCTACA	9766	False	NA	22	True	AATAAA	-24	NA	86381285	86409167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402186_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
m54284U_201203_174622/138282747/ccs	chr8	+	5528	34	NIC	ENSMUSG00000031644.20	novel	5109	35	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_17	14.9073046478596	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATCAGTTGTCCTTATT	NA	False	NA	9	True	NA	NA	NA	61446233	61584380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61503061_61503194_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
m54284U_201203_174622/138348208/ccs	chr18	+	5514	4	NNC	ENSMUSG00000024276.8	novel	5472	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	31.5946549628608	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGGATCTCTTTTT	NA	False	NA	22	True	GATAAA	-24	NA	24087748	24097730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_24087948_24089395_24089911_24090111_24090254_24093072
m54284U_201203_174622/138413060/ccs	chr2	+	8567	36	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	148.990085959723	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962843	52012395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51962958_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201203_174622/138479647/ccs	chr19	-	5642	1	Intergenic	novelGene_9259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCCAGCAAGGAATCCCA	NA	False	NA	NA	False	NA	NA	NA	41583626	41577984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_41578000_41583600
m54284U_201203_174622/138545410/ccs	chr14	+	6198	18	NIC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	0	0	intron_retention	FALSE	canonical	2	46	junction_5	241.869248901165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTGTCTTTAACATAAG	NA	False	NA	14	True	AATAAA	-19	NA	34395884	34469940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
m54284U_201203_174622/138545438/ccs	chrX	-	1418	10	NNC	ENSMUSG00000067567.13	novel	686	7	NA	NA	0	13331	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	19.2700112437262	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGATGTGTTAATGTC	NA	False	NA	NA	False	NA	NA	NA	101548752	101435921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_101436253_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
m54284U_201203_174622/138674236/ccs	chr19	+	4081	9	NNC	ENSMUSG00000024976.15	novel	2976	7	NA	NA	-254	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_1	129.893947126107	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	3104	False	NA	21	True	TATAAA	-24	NA	53932482	54021562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_53932733_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
m54284U_201203_174622/138675356/ccs	chr4	-	1876	11	NIC	ENSMUSG00000029022.19	novel	1879	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	96.0689856301189	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTCTCCATGTAAGC	NA	False	NA	-12	True	AATAAA	-16	NA	147952980	147945247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952825
m54284U_201203_174622/138676831/ccs	chr7	+	2898	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	250.178884097845	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648595_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201203_174622/138806505/ccs	chr4	-	4481	12	NIC	ENSMUSG00000043962.17	novel	4378	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_4	315.480088041089	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGTGTTTGTTGCTTG	6764	False	NA	-3	True	AATAAA	-28	NA	126096463	126057874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126066929_126067123_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
m54284U_201203_174622/138807616/ccs	chr2	+	4612	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	280	junction_7	133.754300931789	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
m54284U_201203_174622/138807914/ccs	chr2	-	4359	4	NIC	ENSMUSG00000078870.10	novel	1113	4	NA	NA	0	3167	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	147.159777113177	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTTGCTTCTTGGTCAT	NA	False	NA	NA	False	NA	NA	NA	176898214	176881982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_176886072_176887228_176887290_176887494_176887622_176898132
m54284U_201203_174622/138873093/ccs	chr3	+	4275	22	NIC	ENSMUSG00000028059.17	novel	4300	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	121	junction_4	61.0003159725656	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	NA	False	NA	15	True	ATTAAA	-17	NA	88528431	88555359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
m54284U_201203_174622/139003847/ccs	chr10	+	4322	20	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_12	122.754512585529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235753	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377475_25377530_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201203_174622/139069660/ccs	chr6	+	1515	8	NNC	ENSMUSG00000055912.9	novel	1546	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	38.8471625838532	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGTTCTGGAGAAT	NA	False	NA	10	True	ATTAAA	-21	NA	72332456	72336745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334935_72335000_72335290_72335419_72335561_72335740_72335988
m54284U_201203_174622/139135239/ccs	chr2	-	5435	19	NIC	ENSMUSG00000034101.15	novel	5380	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_17	76.0293965239924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGGAGGTCTGTGTCA	NA	False	NA	-38	True	AATAAA	-16	NA	84481109	84431126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
m54284U_201203_174622/139264357/ccs	chr8	+	4836	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	70.9023193477399	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763543	85784212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781350_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
m54284U_201203_174622/139265628/ccs	chr14	-	4198	25	NNC	ENSMUSG00000037572.18	novel	4260	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	27	junction_24	87.1525542272476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTCTTGCTATGGTTT	NA	False	NA	0	True	AATAAA	-20	NA	47514314	47478400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47514064
m54284U_201203_174622/139265900/ccs	chr2	+	2760	11	NIC	ENSMUSG00000027180.13	novel	3720	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	96.8347045227072	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTATTTATTTATTT	NA	False	NA	14	True	NA	NA	NA	103858190	103887849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103886345
m54284U_201203_174622/139331189/ccs	chr14	+	1684	3	NNC	ENSMUSG00000035235.14	novel	1550	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	103	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGAGTTTGTGCTGTG	NA	False	NA	18	True	AATAAA	-16	NA	61836988	61843395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_61837154_61837242_61837345_61841978
m54284U_201203_174622/139331940/ccs	chr17	+	3792	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	169.610455447836	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
m54284U_201203_174622/139526188/ccs	chr7	+	260	1	Intergenic	novelGene_3845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAAAACCAAGATTTTCT	413	False	NA	NA	False	NA	NA	NA	45176561	45176821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_45176600_45176800
m54284U_201203_174622/139528683/ccs	chr1	+	2316	8	NNC	ENSMUSG00000004768.15	novel	4322	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_1	40.1512446753471	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTGCTTTTCCTTTCTTT	NA	False	NA	8	True	TATAAA	-18	NA	33758975	33779792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_33759102_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
m54284U_201203_174622/139593603/ccs	chr9	+	4486	26	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_17	210.538836322423	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290869	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299305_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
m54284U_201203_174622/139594496/ccs	chr8	-	3616	23	NIC	ENSMUSG00000033703.10	novel	3838	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	25.2077319897312	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCAGAAAACTGTTTTTT	1243	False	NA	-7	True	AATAAA	-19	NA	111629091	111609094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
m54284U_201203_174622/13960061/ccs	chr8	+	3390	26	NIC	ENSMUSG00000031441.16	novel	7443	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_25	17.1588344592516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCAAATGTGACCTCT	NA	False	NA	NA	False	AATAAA	-15	NA	12807015	12901724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12901632
m54284U_201203_174622/139658436/ccs	chr13	+	211	1	Intergenic	novelGene_7085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	54847712	54847923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_54847700_54847900
m54284U_201203_174622/139658719/ccs	chr13	-	3603	6	NIC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	6	junction_5	35.3236464708841	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	4826	False	NA	-5	True	NA	NA	NA	74765821	74753063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74755855_74757240_74757302_74758318_74758446_74760842_74761068_74765320_74765407_74765508
m54284U_201203_174622/139921019/ccs	chr7	+	5419	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	63.3399134565102	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGGACTGATGCTTAG	NA	False	NA	84	True	NA	NA	NA	140808696	140842663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840827_140841028_140841125_140841456_140841688_140841818_140842321
m54284U_201203_174622/139921460/ccs	chr2	-	198	1	Intergenic	novelGene_616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATTATGCTGCAGAAAA	NA	False	NA	NA	False	NA	NA	NA	20520869	20520671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_20520700_20520900
m54284U_201203_174622/139987511/ccs	chr19	+	7542	19	NNC	ENSMUSG00000025060.16	novel	7278	18	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	102.985570726087	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGGAATTTTCTTTTT	NA	False	NA	21	True	AATAAA	-17	NA	47568060	47633685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_47568783_47591238_47591447_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
m54284U_201203_174622/140117702/ccs	chr17	+	1511	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_3	138.628412436607	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_23945616_23951310_23951799_23952796_23952890_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
m54284U_201203_174622/140117843/ccs	chr2	+	4590	14	NIC	ENSMUSG00000005506.17	novel	4830	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_11	234.394599772194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90846910
m54284U_201203_174622/140117917/ccs	chr12	-	2532	25	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	0	-2334	intron_retention	FALSE	canonical	3	1685	junction_14	174.114500760276	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	False	NA	-11	True	AATAAA	-14	NA	13299164	13269307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
m54284U_201203_174622/140118116/ccs	chr9	+	3512	27	ISM	ENSMUSG00000032410.14	ENSMUST00000034981.14	5499	42	7	41162	0	0	5prime_fragment	FALSE	canonical	3	35	junction_24	7.47273149365955	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATTTAAAATTTCTTT	NA	False	NA	NA	False	AATATA	-35	NA	95836819	95893918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576
m54284U_201203_174622/140181980/ccs	chr4	-	2918	8	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	526.640255946764	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327235	141303372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141305255_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
m54284U_201203_174622/140183731/ccs	chr3	+	7579	33	NIC	ENSMUSG00000054199.19	novel	7587	33	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	85.5676758387038	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAAGTGTTCGTTTTCT	NA	False	NA	10	True	AGTAAA	-14	NA	88742537	88817405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88742597_88744296_88744828_88753694_88753887_88761908_88762103_88762932_88763008_88763121_88763173_88763725_88763777_88764434_88764534_88765693_88765814_88766195_88766367_88770726_88770920_88776056_88776159_88777109_88777151_88783213_88783238_88787377_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799824_88799976_88801748_88801866_88802126_88803879_88805411_88805668_88806196_88806382_88807236_88807435_88808884_88809029_88810063_88810208_88810288_88810409_88812758_88812870_88814678_88814890_88815295_88815915_88815993_88816097_88816544
m54284U_201203_174622/14026416/ccs	chr12	-	175	1	Intergenic	novelGene_6560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	8818935	8818760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_8818800_8818900
m54284U_201203_174622/14026687/ccs	chr8	+	1935	10	NNC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	458.369089514359	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024348	106032002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_106024508_106024916_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
m54284U_201203_174622/14027395/ccs	chr9	-	238	1	Intergenic	novelGene_4951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTTCTACTTATATGTG	NA	False	NA	NA	False	NA	NA	NA	75443713	75443475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_75443500_75443700
m54284U_201203_174622/14027520/ccs	chr15	+	4947	13	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	-2087	combination_of_known_junctions	TRUE	canonical	3	44	junction_6	197.527406677881	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	27	False	NA	25	True	AATAAA	-26	NA	34082839	34143683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34121568_34121659_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
m54284U_201203_174622/140378996/ccs	chr8	-	2024	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	0	-356	intron_retention	TRUE	canonical	3	28	junction_3	125.867655363348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAAATTATGGAGATT	4525	False	NA	-6	True	AATAAA	-20	NA	14025032	14002485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_14004136_14005719_14005818_14024516_14024730_14024969
m54284U_201203_174622/140445891/ccs	chr2	-	2633	2	Antisense	novelGene_ENSMUSG00000081611.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCGGTTGTTTGTTTGT	7373	False	NA	NA	False	ATTAAA	-16	NA	77139778	77114977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_77117450_77139617
m54284U_201203_174622/140446538/ccs	chr18	+	7118	20	NIC	ENSMUSG00000053477.19	novel	2192	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_13	27.706314969636	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCTTCTGTAAGACCAAA	3644	False	NA	NA	False	TATAAA	-43	NA	69479243	69821038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788034_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
m54284U_201203_174622/140511407/ccs	chr9	+	1256	3	NIC	ENSMUSG00000032599.13	novel	607	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_2	36.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGGCTCACCCACCATG	NA	False	NA	9	True	AATAAA	-23	NA	108661020	108674892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108661070_108673262_108673983_108674405
m54284U_201203_174622/140576808/ccs	chr11	+	3356	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	100.296540926812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072488	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
m54284U_201203_174622/140640554/ccs	chr13	+	3394	7	NIC	ENSMUSG00000021481.12	novel	3333	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_4	17.8013732304249	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCCGATGTGTGCGCT	6	False	NA	11	True	NA	NA	NA	55253126	55282638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270094_55270329_55278346_55278441_55280119
m54284U_201203_174622/140642833/ccs	chr7	+	190	1	Intergenic	novelGene_3881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCCTCGGGCAGCCCTGG	178	False	NA	NA	False	NA	NA	NA	65862311	65862501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_65862300_65862500
m54284U_201203_174622/140706171/ccs	chr4	+	3596	17	NIC	ENSMUSG00000028289.13	novel	6746	17	NA	NA	0	-2430	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	5.85768725692999	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAATATGTGATTTCA	21	False	NA	NA	False	AATAAA	-38	NA	28813151	28964385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938765_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
m54284U_201203_174622/140904688/ccs	chr1	+	2907	10	NNC	ENSMUSG00000073609.10	novel	3232	10	NA	NA	0	-308	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.736497298245	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACCTTGTTCTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	93752961	93779762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_93753042_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
m54284U_201203_174622/14090994/ccs	chr4	-	1129	8	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	406.055741624377	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_148701302_148702022_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
m54284U_201203_174622/14091092/ccs	chr16	+	5245	30	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	383.342298056439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/14092859/ccs	chr10	-	2682	7	NNC	ENSMUSG00000071359.14	novel	2873	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	90.384364429548	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTAAGTATTCCCCCT	NA	False	NA	-7	True	AATAAA	-21	NA	22607260	22579777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587886_22607014
m54284U_201203_174622/140970690/ccs	chr5	-	5019	27	NIC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_8	236.786102387838	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957963	110932353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
m54284U_201203_174622/141033564/ccs	chr2	+	2879	13	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	502	junction_10	48.356890810813	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
m54284U_201203_174622/141035395/ccs	chr4	-	1186	10	NIC	ENSMUSG00000028391.17	novel	1440	11	NA	NA	0	-100	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	61.169063430689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGTGTGGCTTTGTGTT	NA	False	NA	-4	True	NA	NA	NA	62389133	62371970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_62372175_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
m54284U_201203_174622/141101229/ccs	chr11	+	7416	30	ISM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	0	5244	0	759	5prime_fragment	TRUE	canonical	3	45	junction_8	9.8353871035569	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGTATTTTTACTTCA	NA	False	NA	NA	False	AATAAA	-22	NA	29323657	29455564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851
m54284U_201203_174622/141101310/ccs	chr5	+	3016	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	31.927870096342	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168039	146239684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229448_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
m54284U_201203_174622/141231419/ccs	chr5	-	2822	5	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4248	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	64.1755405119427	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110585435	110577740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_110580012_110580270_110580449_110580766_110580968_110584479_110584595_110585378
m54284U_201203_174622/141231447/ccs	chr13	-	2731	14	NIC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	308	junction_9	2416.1698821499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	4751	False	NA	-8	True	AATACA	-15	NA	58550330	58538955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58550206
m54284U_201203_174622/141232638/ccs	chr2	+	3949	4	NNC	ENSMUSG00000042155.4	novel	839	2	NA	NA	432	-582	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1.63299316185545	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCTGTAACTTTAATT	5904	False	NA	NA	False	AATAAA	-12	NA	69653145	69666413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_69653333_69654130_69655345_69659189_69659343_69664018
m54284U_201203_174622/141232886/ccs	chr3	+	2157	9	NIC	ENSMUSG00000027900.16	novel	3271	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	37.0506410200957	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTTGTCATGAAAATGA	NA	False	NA	NA	False	AATAAA	-14	NA	106455179	106482161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_106455237_106459471_106459597_106462482_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
m54284U_201203_174622/141295616/ccs	chr17	-	3018	5	NIC	ENSMUSG00000024165.10	novel	2672	5	NA	NA	0	314	combination_of_known_junctions	TRUE	canonical	3	88	junction_4	732.597220510698	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACAGCCTGTGTGTATT	4817	False	NA	-8	True	ATTAAA	-11	NA	25179619	25161129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179465
m54284U_201203_174622/141362464/ccs	chrX	+	4574	19	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	205	junction_12	31.0921072911192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570172	20586778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580971_20581091_20581176_20581266_20581362_20582985_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
m54284U_201203_174622/141428112/ccs	chr6	+	6289	26	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_11	77.5262123413752	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891352	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
m54284U_201203_174622/141494824/ccs	chr7	-	3885	22	NIC	ENSMUSG00000063550.9	novel	4052	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_11	29.4626093799229	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACATCTCAGGAAAATCC	10001	False	NA	-5	True	AATAAA	-15	NA	101859352	101783409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
m54284U_201203_174622/141559542/ccs	chr11	+	3437	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	89.777533604829	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072425	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
m54284U_201203_174622/141559827/ccs	chr6	+	1721	11	NIC	ENSMUSG00000068328.11	novel	1491	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_9	328.64937243208	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034194_83034376_83034478
m54284U_201203_174622/14156325/ccs	chr9	-	2048	14	NIC	ENSMUSG00000039542.17	novel	2525	14	NA	NA	0	-647	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	37.2431638618132	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAATTTTCTCCCTGTCT	8517	False	NA	NA	False	AATAAA	-19	NA	49710225	49443222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_49443277_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481201_49709977
m54284U_201203_174622/14156659/ccs	chr2	+	2864	20	NIC	ENSMUSG00000017999.17	novel	2714	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	666	junction_11	73.1547140542949	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCCTGTTGTCTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	166857229	166876867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
m54284U_201203_174622/14157685/ccs	chr1	+	3532	8	NIC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	28.1163762288972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	4	True	AATAAA	-18	NA	90926458	91045037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
m54284U_201203_174622/141689229/ccs	chr8	+	2150	1	Intergenic	novelGene_4321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGTAAAAT	600	False	NA	NA	False	NA	NA	NA	70611308	70613458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_70611300_70613500
m54284U_201203_174622/141691569/ccs	chr3	+	711	6	NNC	ENSMUSG00000038374.11	novel	2604	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_5	1724.59750666641	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTACTTTACTGTTC	8642	False	NA	16	True	AATAAA	-20	NA	96537255	96539216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539006
m54284U_201203_174622/141754408/ccs	chr2	+	5389	39	NIC	ENSMUSG00000039943.17	novel	5217	37	NA	NA	-234	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	17.4713061159182	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACATCTACCAGAGTAT	NA	False	NA	2	True	AATAAA	-14	NA	135501239	135856513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_135501375_135583749_135583808_135647468_135647526_135719302_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885
m54284U_201203_174622/141755750/ccs	chrX	+	3732	24	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_19	302.220546917654	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118864	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/141755924/ccs	chr7	+	4984	15	NNC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	25.8200207085075	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311774	118336247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323680_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
m54284U_201203_174622/141885678/ccs	chr16	+	1717	8	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	17	junction_3	252.060893193591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGGTTGCCCCTTCA	7070	False	NA	-15	True	NA	NA	NA	38379059	38411708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
m54284U_201203_174622/141885772/ccs	chr4	-	174	1	Intergenic	novelGene_2151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	129344519	129344345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129344300_129344500
m54284U_201203_174622/141885775/ccs	chr16	-	2961	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	57.1271598864692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201203_174622/141887515/ccs	chr4	+	197	1	Intergenic	novelGene_2437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACACCTTCTTTCTTTCTT	779	False	NA	NA	False	NA	NA	NA	156015480	156015677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156015500_156015700
m54284U_201203_174622/141887619/ccs	chr11	+	5297	17	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	41.7655285492713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93776677	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_93776889_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
m54284U_201203_174622/141887862/ccs	chr4	+	2515	20	NNC	ENSMUSG00000029062.15	novel	2673	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	147.782276028058	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAACTTGCCTCGTAA	3962	False	NA	23	True	ATTAAA	-28	NA	155709325	155734395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155709399_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724236_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
m54284U_201203_174622/141888269/ccs	chr5	+	3907	22	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	241.865941767021	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186421	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211022_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/141951207/ccs	chr9	-	4010	4	NIC	ENSMUSG00000032436.18	novel	993	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1122	junction_1	141.662352875498	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGTTTCCTTATTGCATG	NA	False	NA	-17	True	AATAAA	-13	NA	114610917	114585906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_114586360_114587872_114591074_114592286_114592461_114610735
m54284U_201203_174622/141951443/ccs	chr8	+	2238	9	NIC	ENSMUSG00000014859.10	novel	1993	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	941	junction_8	115.834404971062	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGATCTGGTTCTTTGG	NA	False	NA	21	True	AATAAA	-17	NA	106024348	106032002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106024508_106024912_106025023_106025166_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
m54284U_201203_174622/141952872/ccs	chr6	-	1897	6	NNC	ENSMUSG00000004446.13	novel	2415	7	NA	NA	0	-266	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	382.487333123595	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120893797	120870080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_120871254_120872588_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
m54284U_201203_174622/142017886/ccs	chr9	+	5056	35	NNC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	81	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_19	45.3547722221356	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26942025	27006611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978253_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
m54284U_201203_174622/142018567/ccs	chr9	+	3779	6	NIC	ENSMUSG00000004096.10	novel	831	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	777	junction_1	60.6630035524124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATCAATTTGACTTTTT	NA	False	NA	13	True	ATTAAA	-13	NA	14411942	14421661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14419266_14421495
m54284U_201203_174622/142019321/ccs	chr3	+	4226	14	NIC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_6	52.5803977243618	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101668	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
m54284U_201203_174622/142082408/ccs	chr11	+	3392	12	NNC	ENSMUSG00000006169.21	novel	3398	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	144.874525363066	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742790	45801452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781621_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
m54284U_201203_174622/142083800/ccs	chr3	-	6744	24	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_8	20.3423441147567	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27765456	27470310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27765268
m54284U_201203_174622/142150089/ccs	chr11	+	3802	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	236.696182563717	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746291
m54284U_201203_174622/142150346/ccs	chr10	+	197	1	Intergenic	novelGene_5168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAATGAGCCTAAAAGACAA	1594	False	NA	NA	False	NA	NA	NA	3790971	3791168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_3791000_3791200
m54284U_201203_174622/142214696/ccs	chr2	+	4217	5	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078866.11	novel	794	4	NA	NA	0	2548	intron_retention	FALSE	canonical	3	142	junction_1	41.6833300013327	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177156525	177204104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177156642_177193535_177193591_177198701_177198829_177199035_177199097_177200246
m54284U_201203_174622/14221906/ccs	chr7	+	2023	11	NIC	ENSMUSG00000099481.7	novel	2298	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_2	28.6462912084619	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGAATTATAAAGTTATG	NA	False	NA	-27	True	AATGAA	-32	NA	101714717	101731798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101715012_101719103_101719199_101720425_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
m54284U_201203_174622/142279147/ccs	chrX	+	1676	7	NNC	ENSMUSG00000031403.15	novel	610	3	NA	NA	-1793	0	at_least_one_novel_splicesite	FALSE	canonical	3	454	junction_1	848.656143558744	362	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74147761	74153383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_74147807_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
m54284U_201203_174622/142280891/ccs	chr11	+	3535	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	605	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	315.78689016487	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	False	NA	11	True	AATAAA	-20	NA	72498749	72577307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_72498823_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
m54284U_201203_174622/142345750/ccs	chr3	-	5286	22	NNC	ENSMUSG00000004591.17	novel	6207	22	NA	NA	-445	-614	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_21	101.001807307419	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTTTAAGTTTTCAT	NA	False	NA	0	True	NA	NA	NA	142588210	142497276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142588123
m54284U_201203_174622/142409775/ccs	chr7	+	2461	5	NIC	ENSMUSG00000055102.16	novel	2362	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	25.6843824142221	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACATTCATCCATTGC	2836	False	NA	7	True	AATAAA	-21	NA	43256592	43267709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43256742_43259209_43259403_43261406_43261534_43261970_43262064_43265810
m54284U_201203_174622/142411664/ccs	chr3	+	2225	17	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2124	0	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_1	41.3407618912617	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116655339	116697127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_116655359_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
m54284U_201203_174622/142475744/ccs	chr13	-	787	6	NNC	ENSMUSG00000021660.15	novel	888	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	182	junction_3	2553.9774940277	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTATCATTTTACTT	NA	False	NA	-17	True	AATAAA	-36	NA	98453504	98446404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_98446710_98447488_98447546_98449599_98449711_98450146_98450261_98452737_98452807_98453373
m54284U_201203_174622/142540900/ccs	chr10	+	3432	12	NNC	ENSMUSG00000019894.15	novel	2395	3	NA	NA	375	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	34.3374118308248	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCGTGTCCCTCATTGA	NA	False	NA	NA	False	AATAAA	-17	NA	103204078	103255238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_103204182_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
m54284U_201203_174622/142607764/ccs	chr4	-	4273	13	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	684	junction_3	52.173588465174	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155825810_155830485_155831939_155833127_155833666_155834588_155834714_155834929_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
m54284U_201203_174622/142608525/ccs	chr2	+	193	1	Intergenic	novelGene_599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16609774	16609967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_16609800_16610000
m54284U_201203_174622/142608781/ccs	chr5	-	4799	25	NNC	ENSMUSG00000029191.17	novel	4751	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_24	133.829954035792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACTGAGTCTTGCCCCT	NA	False	NA	-4	True	AATAAA	-19	NA	65493013	65419194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492818
m54284U_201203_174622/142803111/ccs	chr17	-	4447	13	NIC	ENSMUSG00000024045.7	novel	3731	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	440	junction_9	68.5072481972204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTTGTTTTT	NA	False	NA	-10	True	AATAAA	-13	NA	32540159	32523666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
m54284U_201203_174622/142805190/ccs	chr1	+	3986	29	NNC	ENSMUSG00000041763.15	novel	4649	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_26	73.5139511957299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACTCAGTGGCGTGTG	3304	False	NA	4	True	ATTAAA	-17	NA	43973166	44041496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031566_44038787_44038996_44040478_44040599_44041263
m54284U_201203_174622/14287951/ccs	chr5	-	5964	18	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	-125	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_7	27.3729844338649	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTCCTTAGATTATT	NA	False	NA	-1	True	ATTAAA	-19	NA	108016890	107892660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
m54284U_201203_174622/14288017/ccs	chr6	-	3374	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	759	junction_15	51.987771591613	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	7856	False	NA	-27	True	AATACA	-9	NA	124806447	124792000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
m54284U_201203_174622/14289404/ccs	chr11	+	3434	20	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	96.5630418567662	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072425	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
m54284U_201203_174622/142935870/ccs	chr11	-	208	1	Intergenic	novelGene_6118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACTGGCAAGCAGTT	NA	False	NA	NA	False	NA	NA	NA	80515175	80514967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80515000_80515200
m54284U_201203_174622/142936687/ccs	chr7	+	2715	5	NNC	ENSMUSG00000078815.9	novel	1977	4	NA	NA	-603	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	7.79422863405995	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTCTGTGTTGGAGCTC	NA	False	NA	NA	False	ATTAAA	-21	NA	3472107	3484183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3473509_3478953_3479029_3480334_3480473_3481159_3481295_3483217
m54284U_201203_174622/143001377/ccs	chr15	-	3496	13	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	0	1151	combination_of_known_junctions	FALSE	canonical	3	44	junction_12	44.7278033094505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCATCCTTTTGTAAGC	NA	False	NA	0	True	ATTAAA	-21	NA	77191128	76966537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77190563
m54284U_201203_174622/143130913/ccs	chr1	-	272	1	Intergenic	novelGene_309	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGGCTCCAGTGTGTCGG	NA	False	NA	NA	False	NA	NA	NA	131938234	131937962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_131938000_131938200
m54284U_201203_174622/143131959/ccs	chr19	-	5409	15	NIC	ENSMUSG00000025085.17	novel	5927	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	26.4856526428625	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGAGAGTGGCAGTCC	NA	False	NA	-9	True	AATAAA	-16	NA	57107456	57021705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_57025770_57027838_57027920_57028918_57028994_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57037893_57037942_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57107183
m54284U_201203_174622/143132855/ccs	chr19	-	1188	10	NIC	ENSMUSG00000036748.17	novel	1164	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_9	349.700542086801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGCTCATTCTGCTC	-4	True	NA	-6	True	AGTAAA	-15	NA	46327141	46318982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
m54284U_201203_174622/143133264/ccs	chr11	+	5844	18	NIC	ENSMUSG00000018401.18	novel	792	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	23.4398294690113	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGGGTCTTTTTATTT	NA	False	NA	20	True	AATAAA	-20	NA	87486477	87507128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87486703_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495507_87495679_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
m54284U_201203_174622/143196176/ccs	chr2	-	178	1	Intergenic	novelGene_696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAACAAAACAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	31065486	31065308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31065300_31065500
m54284U_201203_174622/143198158/ccs	chr19	+	5032	14	NIC	ENSMUSG00000055491.15	novel	564	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	133.150935399017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045697	46061240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_46045799_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
m54284U_201203_174622/143198362/ccs	chr9	+	3874	25	NIC	ENSMUSG00000036466.18	novel	6680	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_22	7.12378157223317	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTGGGAAATGTCTCA	NA	False	NA	NA	False	NA	NA	NA	64292907	64608257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_64293111_64408804_64408906_64413309_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64602645_64602765_64604588_64604656_64605088_64605191_64607378_64607436_64607644
m54284U_201203_174622/143198687/ccs	chr16	-	1567	7	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	232	junction_6	619.968278758411	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17745751	17743086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745408
m54284U_201203_174622/143261810/ccs	chr10	-	2179	12	NIC	ENSMUSG00000004937.7	novel	1969	12	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	99	junction_11	260.894741448927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTCTGCTTCCTGTGT	4769	False	NA	-11	True	AATAAA	-17	NA	80896015	80879908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895751
m54284U_201203_174622/143393571/ccs	chr9	+	10422	42	NIC	ENSMUSG00000039585.16	novel	12198	43	NA	NA	52	-1667	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	13.425716043437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGGATTTTTTAATC	607	False	NA	NA	False	AATAAA	-32	NA	59658230	59834482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
m54284U_201203_174622/143394111/ccs	chr4	-	168	1	Intergenic	novelGene_2122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	126690132	126689964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_126690000_126690100
m54284U_201203_174622/143394333/ccs	chr6	-	1294	5	NIC	ENSMUSG00000004268.12	novel	1034	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1245	junction_4	117.50957407803	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCAGACCTGAT	NA	False	NA	-15	True	TATAAA	-18	NA	124689104	124681344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124681622_124681901_124682052_124682120_124682620_124682703_124682806_124688838
m54284U_201203_174622/143395344/ccs	chr2	+	4475	16	NIC	ENSMUSG00000039463.15	novel	4521	17	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	2	23	junction_6	29.1803586909643	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTGTGTCACGTGTT	NA	False	NA	7	True	AATAAA	-20	NA	167263642	167318920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
m54284U_201203_174622/143460187/ccs	chr1	+	1105	6	NIC	ENSMUSG00000026111.16	novel	1179	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	188.928134485047	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGTTTATTTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	37469266	37478068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_37469419_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
m54284U_201203_174622/143460813/ccs	chr6	+	4569	7	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	-224	-262	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	55.3132493671774	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	6	True	TATAAA	-19	NA	128339705	128352847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349496_128349567_128349739
m54284U_201203_174622/143524140/ccs	chr4	-	223	1	Intergenic	novelGene_1795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGACTGTAAAACCATT	NA	False	NA	NA	False	AAAAAG	-21	NA	34780949	34780726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_34780700_34780900
m54284U_201203_174622/14352562/ccs	chr6	+	556	5	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	336	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	33.0331273118365	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGTTTGCTGATTTCT	8067	False	NA	4	True	AATACA	-15	NA	122499793	122505591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_122499850_122501445_122501470_122502909_122502998_122503745_122503820_122505277
m54284U_201203_174622/143525797/ccs	chr8	-	3325	11	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-130	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	472.211912175032	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427051	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70426739
m54284U_201203_174622/14353100/ccs	chr10	+	6582	22	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	36.4327728669602	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580852	89655733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_89581151_89591282_89591417_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
m54284U_201203_174622/14354631/ccs	chr13	-	1964	16	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	328	junction_3	1878.87941307815	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
m54284U_201203_174622/143655317/ccs	chr7	-	2800	16	NIC	ENSMUSG00000031078.16	novel	2913	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	97	junction_7	248.80192925297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGATCTTCTGC	NA	False	NA	-20	True	AATAAA	-14	NA	144024482	143989471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
m54284U_201203_174622/143657611/ccs	chr4	+	5259	17	NNC	ENSMUSG00000028718.17	novel	5368	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	17.9369555666507	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGACTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	114857378	114900393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895537_114895728_114896264_114896516_114898370
m54284U_201203_174622/143853629/ccs	chr11	+	4909	32	NIC	ENSMUSG00000020747.19	novel	5329	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_13	20.1870029585754	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGGTGGATCCATGAA	NA	False	NA	15	True	ATTAAA	-23	NA	115656279	115689859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681858_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
m54284U_201203_174622/143853885/ccs	chr17	+	1521	11	ISM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	409	1494	0	0	5prime_fragment	FALSE	canonical	0	0	junction_7	77.0690599397709	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTAATGTTTTGGCCCT	NA	False	NA	NA	False	AAAAAG	-18	NA	15199138	15209673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159
m54284U_201203_174622/143917479/ccs	chr4	-	3484	18	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_12	75.0867088160778	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCTTCCTCCTTGACTC	NA	False	NA	81	True	AGTAAA	-18	NA	72119156	72036041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
m54284U_201203_174622/144049158/ccs	chr15	+	2520	3	NIC	ENSMUSG00000022200.9	novel	2652	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGAGCAAGCATGCCAT	-5	True	NA	18	True	AATAAA	-26	NA	12321535	12351351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12322043_12343122_12343238_12349453
m54284U_201203_174622/144050542/ccs	chr15	-	2459	11	NNC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_3	399.718463421444	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGTGTAAAGTGATCTG	NA	False	NA	-21	True	ATTAAA	-14	NA	98432145	98416700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_98417429_98418198_98418307_98419516_98419644_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
m54284U_201203_174622/144050835/ccs	chr11	+	3712	8	NIC	ENSMUSG00000017692.9	novel	3736	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.25876975726313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGGAGTGACCTCAAGG	7825	False	NA	NA	False	ATTAAA	-23	NA	80191737	80246781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_80192098_80210383_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
m54284U_201203_174622/144115681/ccs	chr2	+	2768	20	NNC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	135.4163375946	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398175	144432669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_144398263_144401137_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
m54284U_201203_174622/144116209/ccs	chr17	+	3562	21	NNC	ENSMUSG00000023938.9	novel	3349	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	45.491620107444	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTT	NA	False	NA	19	True	AATACA	-33	NA	45817766	45831769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825848_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
m54284U_201203_174622/144116373/ccs	chr3	-	2548	14	NIC	ENSMUSG00000027883.16	novel	3498	15	NA	NA	0	-453	combination_of_known_junctions	FALSE	canonical	3	40	junction_13	22.5826555427157	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGTTATCTGTCTCCT	NA	False	NA	-3	True	AATAAA	-15	NA	108629432	108586406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
m54284U_201203_174622/144181751/ccs	chr7	-	197	1	Intergenic	novelGene_3951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCAAACTGGGTCATGCG	NA	False	NA	NA	False	NA	NA	NA	96336194	96335997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_96336000_96336200
m54284U_201203_174622/14419715/ccs	chr7	-	156	1	Intergenic	novelGene_3894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	73625692	73625536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_73625500_73625700
m54284U_201203_174622/14420050/ccs	chr18	-	197	1	Intergenic	novelGene_8818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTGAATGGACCTTAG	8867	False	NA	NA	False	NA	NA	NA	12296814	12296617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_12296600_12296800
m54284U_201203_174622/1442405/ccs	chr7	+	2219	1	Genic_Genomic	ENSMUSG00000058638.15	novel	NA	NA	NA	NA	12193	125	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTGTTTGTTTTTGA	NA	False	NA	NA	False	NA	NA	NA	12582410	12584629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_12582400_12584600
m54284U_201203_174622/144245295/ccs	chr2	-	5597	16	NIC	ENSMUSG00000026933.18	novel	7981	17	NA	NA	0	-552	combination_of_known_junctions	FALSE	canonical	2	13	junction_12	30.5170262130649	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTTACATATGTGGAGTG	NA	False	NA	-2	True	ACTAAA	-39	NA	25873294	25819094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25846258_25846340_25855674_25855837_25856697_25856961_25872793
m54284U_201203_174622/144246422/ccs	chr5	-	4482	28	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	51	junction_7	253.145940005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
m54284U_201203_174622/144247534/ccs	chr9	-	178	1	Intergenic	novelGene_4646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATTGAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	20469564	20469386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_20469400_20469600
m54284U_201203_174622/144313008/ccs	chr17	-	3100	2	Intergenic	novelGene_8549	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	274	False	NA	-17	True	NA	NA	NA	35219329	35215700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35218446_35218974
m54284U_201203_174622/1443361/ccs	chr13	-	3920	22	ISM	ENSMUSG00000021676.11	ENSMUST00000068603.8	5847	36	207003	0	-2055	0	3prime_fragment	FALSE	canonical	3	48	junction_11	9.63906450989153	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGTAGAGTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	95821500	95763681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95818660_95818832_95819417_95819561_95821361
m54284U_201203_174622/1443528/ccs	chr17	-	5257	5	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_2	18.6329680942141	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580381	22556969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22559089_22559947_22562675_22577803_22577897_22578420_22578506_22580148
m54284U_201203_174622/144375999/ccs	chr2	-	188	1	Intergenic	novelGene_794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAAATTTCTAAGTTCC	NA	False	NA	NA	False	NA	NA	NA	52872257	52872069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_52872100_52872300
m54284U_201203_174622/144377410/ccs	chr17	-	6244	19	NIC	ENSMUSG00000024070.16	novel	5884	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_11	40.3060820089671	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTATGTGAAAACCTT	NA	False	NA	1	True	AATAAA	-22	NA	79328245	79256833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79279270_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
m54284U_201203_174622/144442722/ccs	chr8	+	1131	5	Intergenic	novelGene_4279	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_4	30.2572305408145	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTATGGTTTTTTTT	NA	False	NA	19	True	AATAAA	-19	NA	43806967	43824716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_43807091_43809132_43809201_43811094_43811168_43818030_43818205_43824023
m54284U_201203_174622/144443576/ccs	chr7	-	4168	23	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_1	245.905881343531	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	9414	False	NA	-7	True	NA	NA	NA	126102609	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126091365_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201203_174622/1444600/ccs	chr7	+	213	1	Intergenic	novelGene_3948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTAAAATTAAGAACTCT	NA	False	NA	NA	False	NA	NA	NA	90090859	90091072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_90090900_90091100
m54284U_201203_174622/144508771/ccs	chr7	-	467	2	Intergenic	novelGene_4001	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTGTTTTTTCTGTTT	NA	False	NA	NA	False	GATAAA	-6	NA	106838164	106836995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_106837208_106837909
m54284U_201203_174622/144509545/ccs	chr1	-	6602	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_40	238.924381342717	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	8467	False	NA	17	True	NA	NA	NA	84816452	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816331
m54284U_201203_174622/144705489/ccs	chr9	-	4335	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	-457	combination_of_known_junctions	FALSE	canonical	3	170	junction_8	55.2423386211279	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2246	False	NA	-1	True	AATAAA	-15	NA	70411007	70333168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
m54284U_201203_174622/144706096/ccs	chr5	+	6967	18	NIC	ENSMUSG00000036435.14	novel	3371	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_10	27.6889544889662	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTCTTAAGCCTTATA	NA	False	NA	17	True	AATAAA	-27	NA	76677174	76718141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
m54284U_201203_174622/144769096/ccs	chr10	-	6465	13	NIC	ENSMUSG00000020075.9	novel	4722	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	474	junction_12	69.4111642477075	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTTCTTGGTGGCTTTT	NA	False	NA	-5	True	AATAAA	-18	NA	62438060	62416029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
m54284U_201203_174622/144771177/ccs	chr7	-	2380	3	NIC	ENSMUSG00000040364.9	novel	2470	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCCAGCAATTGAGT	NA	False	NA	NA	False	AATAAA	-21	NA	45343826	45327109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45328949_45333603_45333716_45343397
m54284U_201203_174622/14484759/ccs	chr9	+	2454	10	NIC	ENSMUSG00000040188.11	novel	2340	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	104.968190360958	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGGCCCTGATGTCAAT	NA	False	NA	13	True	AATAAA	-15	NA	57468240	57496078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_57468394_57484475_57484545_57484921_57485021_57485556_57485686_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
m54284U_201203_174622/14485584/ccs	chrX	+	5702	15	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	0	-54	intron_retention	FALSE	canonical	3	289	junction_11	149.691110529078	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATCTAGATGTAAATT	NA	False	NA	-34	True	ATTAAA	-25	NA	67722187	67761515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67756020_67756846_67756930_67759170
m54284U_201203_174622/144967996/ccs	chr16	+	1404	7	NIC	ENSMUSG00000022871.14	novel	1520	8	NA	NA	-71	0	combination_of_known_splicesites	TRUE	canonical	3	29	junction_1	163.643582893501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGGAAATGAGACTAA	NA	False	NA	35	True	AATAAA	-41	NA	22737012	22758528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22737341_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
m54284U_201203_174622/144968496/ccs	chr2	-	3045	7	NIC	ENSMUSG00000039804.16	novel	3179	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	41.2812171439856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTGCTAATCTTTCT	3046	False	NA	-9	True	ATTAAA	-12	NA	164876723	164842279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164876602
m54284U_201203_174622/145031505/ccs	chr7	-	3001	13	NIC	ENSMUSG00000037032.17	novel	2690	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	128	junction_3	10.9417650414466	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	False	NA	-23	True	AATAAA	-16	NA	105230399	105207690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
m54284U_201203_174622/145034042/ccs	chr1	+	6439	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	256	junction_20	37.6329446151661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4070	False	NA	20	True	AATAAA	-24	NA	87781008	87872212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
m54284U_201203_174622/145098014/ccs	chr1	-	5616	1	Genic_Genomic	ENSMUSG00000001143.14	novel	NA	NA	NA	NA	3954	1074	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGACCTTTGATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	36463493	36457877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_-_36457900_36463500
m54284U_201203_174622/145162681/ccs	chr18	+	3160	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	89.3559734992575	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	969	False	NA	23	True	AATAAA	-28	NA	38429730	38450902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
m54284U_201203_174622/145229180/ccs	chr11	-	4928	15	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-609	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_11	65.9480314880047	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	9723	False	NA	-2	True	NA	NA	NA	104360296	104224326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104358464_104358579_104360243
m54284U_201203_174622/145296021/ccs	chr11	-	5035	14	NNC	ENSMUSG00000018412.17	novel	5427	15	NA	NA	-608	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_13	71.3494608398002	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGCTTTTCTTG	7561	False	NA	-2	True	NA	NA	NA	104333725	104224326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104269510_104269653_104314747_104316120_104333451
m54284U_201203_174622/145360334/ccs	chr7	-	3393	14	NIC	ENSMUSG00000035354.10	novel	5157	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_12	45.2728741753235	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98790348	98535956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98767394_98767513_98790040
m54284U_201203_174622/145425968/ccs	chr11	-	4899	13	NIC	ENSMUSG00000020740.14	novel	3816	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	358	junction_7	43.9932917866147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTTTCAATACAG	3539	False	NA	-2	True	AATAAA	-15	NA	115494719	115475080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_115476667_115476911_115477023_115477141_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
m54284U_201203_174622/145427103/ccs	chr17	+	5802	13	NIC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1624	junction_8	118.435519259309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88028487_88030758
m54284U_201203_174622/145491627/ccs	chr11	-	2976	10	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	0	-1305	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	118.026780806961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGCAGCCTCTAGTTGCC	NA	False	NA	NA	False	ATTAAA	-30	NA	61470513	61409380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61456647_61456721_61470392
m54284U_201203_174622/145492291/ccs	chr9	+	5182	26	NNC	ENSMUSG00000042185.15	novel	5398	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_14	14.5731808470217	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGGCCTTTAATCATT	NA	False	NA	6	True	ATTAAA	-14	NA	31297499	31332629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308295_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314312_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
m54284U_201203_174622/145492445/ccs	chr10	-	1893	4	NNC	ENSMUSG00000075000.12	novel	1813	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	73.1619208787376	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTGAGTATGACTTG	NA	False	NA	NA	False	AATAAA	-21	NA	67121084	67102467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_67103946_67105804_67105926_67111348_67111434_67120875
m54284U_201203_174622/14550041/ccs	chr19	+	2635	13	NNC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_9	375.622030400537	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424060_6424314_6424578_6424639_6424748_6424929_6426325
m54284U_201203_174622/14550358/ccs	chr3	+	2714	15	NIC	ENSMUSG00000027722.15	novel	2916	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	18	junction_14	113.124998590596	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474460	37633245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37632900
m54284U_201203_174622/145557534/ccs	chr2	+	2618	8	NIC	ENSMUSG00000068735.15	novel	2654	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	105.728570463451	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAATCTGCGTGGTGT	NA	False	NA	10	True	AAGAAA	-43	NA	93017928	93032094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_93018093_93027241_93027324_93027956_93028094_93028607_93028667_93028883_93028933_93029239_93029337_93029737_93029804_93030130
m54284U_201203_174622/145558156/ccs	chr2	+	231	1	Intergenic	novelGene_1097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATAGAAACTCCACAA	NA	False	NA	NA	False	NA	NA	NA	144071221	144071452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_144071200_144071500
m54284U_201203_174622/145558158/ccs	chr9	+	1225	10	NNC	ENSMUSG00000093803.6	novel	385	3	NA	NA	-280	1098	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	57.5924377751879	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGGTGCACAGTCAGGC	NA	False	NA	21	True	AATAAA	-22	NA	124197648	124202494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_124197753_124198703_124198779_124199151_124199239_124199674_124199832_124200091_124200141_124200416_124200507_124200880_124201057_124201276_124201396_124201794_124201908_124202239
m54284U_201203_174622/145688356/ccs	chr9	+	2092	1	FSM	ENSMUSG00000020257.14	ENSMUST00000191147.2	3045	1	-33	986	-32	-986	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGTTTATTCAGGC	NA	False	NA	NA	False	AATAAA	-13	NA	106048094	106050186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_106048100_106050200
m54284U_201203_174622/145753437/ccs	chr11	+	1677	3	NIC	ENSMUSG00000020707.7	novel	1984	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	29.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGAGTTCATTGGGT	NA	False	NA	34	True	NA	NA	NA	80074676	80090583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_80075082_80087698_80087774_80089386
m54284U_201203_174622/145753538/ccs	chr7	-	2782	6	NNC	ENSMUSG00000030678.8	novel	2650	6	NA	NA	218	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	280.358770149963	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126625978	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126622341_126622797_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
m54284U_201203_174622/145817803/ccs	chr14	+	4256	39	NIC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	354	junction_31	131.105569523613	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201203_174622/145885939/ccs	chr12	+	3643	6	NNC	ENSMUSG00000021255.18	novel	4300	7	NA	NA	1024	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	240.979999170056	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCGTTCATGCGTTGTC	NA	False	NA	16	True	AATAAA	-16	NA	86517914	86568399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_86518093_86535320_86535438_86552588_86552700_86553122_86553285_86561054_86561325_86565594
m54284U_201203_174622/145950149/ccs	chr7	-	4437	12	ISM	ENSMUSG00000030726.17	ENSMUST00000208670.2	1716	13	0	-1300	0	0	intron_retention	FALSE	canonical	3	5	junction_11	174.755460785579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770673	99731317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99769103
m54284U_201203_174622/145951433/ccs	chr7	-	206	1	Intergenic	novelGene_3766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGTAGGACACGAAACAA	NA	False	NA	NA	False	NA	NA	NA	29688190	29687984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29688000_29688200
m54284U_201203_174622/146014315/ccs	chr1	-	195	1	Intergenic	novelGene_335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGATCATTAGAATGTC	NA	False	NA	NA	False	NA	NA	NA	135116520	135116325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_135116300_135116500
m54284U_201203_174622/14616750/ccs	chr11	+	4513	8	NIC	ENSMUSG00000051455.14	novel	4573	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	10.6999904634709	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTAGTTTCATTTTT	NA	False	NA	3	True	AATAAA	-13	NA	102556413	102573063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102556597_102557161_102557312_102559127_102559286_102563009_102563115_102564864_102566738_102567559_102567695_102570757_102570939_102571335
m54284U_201203_174622/146212725/ccs	chr3	+	6634	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_36	20.1765064553401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6185	False	NA	12	True	AAGAAA	-13	NA	87524898	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87602704_87602825_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
m54284U_201203_174622/146213053/ccs	chrX	+	6859	45	NIC	ENSMUSG00000079487.12	novel	6809	45	NA	NA	93	0	intron_retention	FALSE	canonical	0	0	junction_39	25.5291924945049	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTTGTATATTA	NA	False	NA	46	True	AATGAA	-34	NA	100317728	100340993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
m54284U_201203_174622/146213498/ccs	chr6	+	3552	16	NIC	ENSMUSG00000029777.11	novel	2380	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	2594	junction_10	233.123677237832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATCTGTTGTGTTTCCAT	NA	False	NA	35	True	ATTAAA	-29	NA	55014991	55056485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
m54284U_201203_174622/146278004/ccs	chr6	+	2715	14	NNC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_10	516.276851100501	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808316	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829722_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201203_174622/146342355/ccs	chr17	+	1878	12	NNC	ENSMUSG00000068039.14	novel	2446	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_3	1022.57543115249	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCCTGTCCTCAGTTT	NA	False	NA	5	True	ATTAAA	-20	NA	13135328	13143449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_13135517_13136684_13136771_13136929_13137056_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
m54284U_201203_174622/146342366/ccs	chr5	-	271	2	Intergenic	novelGene_2778	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	86	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGGGGTTCTATCGT	NA	False	NA	-4	True	NA	NA	NA	113734518	113734151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_113734289_113734384
m54284U_201203_174622/146344649/ccs	chr2	-	178	1	Intergenic	novelGene_1264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTGAATACCTTGTTC	NA	False	NA	NA	False	NA	NA	NA	168617708	168617530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168617500_168617700
m54284U_201203_174622/146473176/ccs	chr14	+	2851	7	NIC	ENSMUSG00000040618.8	novel	2417	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1534	junction_4	87.5323749630196	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55777971_55779862_55780109_55781045_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
m54284U_201203_174622/146539921/ccs	chr10	+	4427	29	NIC	ENSMUSG00000039994.16	novel	4385	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_23	70.0407315897875	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6606	False	NA	11	True	AATAAA	-41	NA	128067948	128088801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
m54284U_201203_174622/146540354/ccs	chr14	-	1832	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	116	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_8	1031.02108823001	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63746089	63729795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63745755
m54284U_201203_174622/146604329/ccs	chr16	-	176	1	Intergenic	novelGene_8208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAAGGAT	564	False	NA	NA	False	NA	NA	NA	32078755	32078579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32078600_32078800
m54284U_201203_174622/146606388/ccs	chr6	+	2703	22	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	62	junction_6	53.746739604748	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	173	False	NA	NA	False	AATAAA	-22	NA	49372537	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49434589_49434713_49442402_49442472_49446061
m54284U_201203_174622/146606402/ccs	chr1	+	1826	1	Intergenic	novelGene_455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTATTGCAAATGACCTG	9642	False	NA	NA	False	NA	NA	NA	167098760	167100586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_167098800_167100600
m54284U_201203_174622/146672336/ccs	chr3	+	10072	57	NNC	ENSMUSG00000028080.17	novel	6372	39	NA	NA	-452	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_21	6.58846297612388	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGAAACTGACATTGTC	NA	False	NA	14	True	AATAAA	-22	NA	86131534	86689999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_86131791_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267037_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
m54284U_201203_174622/146736517/ccs	chr19	+	3247	13	NIC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	341.11706812569	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	1469	False	NA	22	True	AATAAA	-22	NA	6414586	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414737_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
m54284U_201203_174622/14680106/ccs	chr3	+	290	1	Intergenic	novelGene_1509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCCTCAGGCCTTAAATT	NA	False	NA	NA	False	NA	NA	NA	88940932	88941222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88940900_88941200
m54284U_201203_174622/14680158/ccs	chr17	-	178	1	Intergenic	novelGene_8401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGAATCTCTTTCTT	6053	False	NA	NA	False	NA	NA	NA	24019183	24019005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24019000_24019200
m54284U_201203_174622/146801969/ccs	chr9	+	4354	26	NNC	ENSMUSG00000032115.15	novel	4432	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_23	172.388231616894	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290853	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300878_44300925_44302132_44302184_44302285
m54284U_201203_174622/146803508/ccs	chr1	+	3021	8	NIC	ENSMUSG00000026174.10	novel	3268	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	351.989331934816	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	860	False	NA	38	True	AATAAA	-23	NA	74545216	74570001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_74545374_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
m54284U_201203_174622/14681889/ccs	chrX	-	5719	21	NIC	ENSMUSG00000025658.17	novel	5738	22	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_12	3.87298334620742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATCCCTGTAAAGCAC	NA	False	NA	NA	False	AATAAA	-11	NA	156826361	156604431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
m54284U_201203_174622/146934456/ccs	chr11	+	3444	25	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2592	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	174.17459611136	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	NA	False	NA	40	True	AATAAA	-25	NA	115727740	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115727869_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
m54284U_201203_174622/146998375/ccs	chrX	+	5431	21	NIC	ENSMUSG00000041229.16	novel	5728	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_12	14.924727803213	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGCTTGACATTATT	NA	False	NA	6	True	GATAAA	-19	NA	150304176	150416855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
m54284U_201203_174622/147064097/ccs	chr4	-	658	3	Antisense	novelGene_ENSMUSG00000086159.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGAGAGGTTGGAGG	NA	False	NA	NA	False	NA	NA	NA	140412317	140410725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_140411134_140411591_140411749_140412224
m54284U_201203_174622/147065307/ccs	chr17	+	1058	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	428.054669405673	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	21	True	AATAAA	-29	NA	48717041	48724294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_48717123_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
m54284U_201203_174622/147130101/ccs	chrX	+	1512	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	0	993	0	-993	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTGATTTCCTTTTCTTT	NA	False	NA	16	True	NA	NA	NA	72271896	72273408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_72271900_72273400
m54284U_201203_174622/147195628/ccs	chr4	+	2320	10	NNC	ENSMUSG00000028426.11	novel	3810	10	NA	NA	0	-1475	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_5	380.826716045922	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGCATGTTTGCTTTTG	-9	True	NA	22	True	AGTAAA	-14	NA	55350051	55390762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380994_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
m54284U_201203_174622/147259395/ccs	chr7	+	3586	13	NIC	ENSMUSG00000040268.18	novel	3777	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	74.0793024775177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCTTTTATTTGGTTC	NA	False	NA	23	True	AATAAA	-25	NA	130467616	130515042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511389_130512561
m54284U_201203_174622/147262162/ccs	chr1	+	3646	10	NIC	ENSMUSG00000060679.15	novel	1418	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	624	junction_3	44.6121834657333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	False	NA	14	True	AATAAA	-16	NA	42890435	42944842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42937769_42938600_42938710_42942454_42942625_42944564
m54284U_201203_174622/147325224/ccs	chr1	-	3139	21	NIC	ENSMUSG00000026442.15	novel	3049	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	5.90148286450109	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGCCAATTTTGTCATT	NA	False	NA	NA	False	AAGAAA	-6	NA	132669516	132527572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
m54284U_201203_174622/147457902/ccs	chr3	-	5861	2	NNC	ENSMUSG00000040209.13	novel	13834	9	NA	NA	-772	-121025	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAAATAATTAGACTATA	NA	False	NA	NA	False	NA	NA	NA	9675917	9624780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_9630360_9675635
m54284U_201203_174622/147458290/ccs	chr2	-	4865	3	NIC	ENSMUSG00000090093.9	novel	1911	4	NA	NA	0	2380	intron_retention	FALSE	canonical	3	23	junction_1	23	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	174983805	174968905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_174973563_174974988_174975116_174983724
m54284U_201203_174622/14748194/ccs	chr11	+	229	1	Intergenic	novelGene_6380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAAGCTAAAAACAAGAT	4116	False	NA	NA	False	NA	NA	NA	105788934	105789163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_105788900_105789200
m54284U_201203_174622/147523511/ccs	chrX	+	9597	47	Fusion	ENSMUSG00000087424.2_ENSMUSG00000031010.18	novel	1452	7	NA	NA	0	1034	multi-exon	FALSE	canonical	3	31	junction_2	269.212009130561	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	NA	False	NA	NA	False	AATAGA	-15	NA	12908253	13037171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
m54284U_201203_174622/147523814/ccs	chr10	+	4049	17	NIC	ENSMUSG00000019996.18	novel	4252	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	234	junction_11	29.9467626589253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTATTTATTTAAAT	NA	False	NA	14	True	ATTAAA	-19	NA	20024743	20157268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143123_20145105_20145335_20149025_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
m54284U_201203_174622/147587193/ccs	chr10	-	170	1	Intergenic	novelGene_5530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGATATATCTGGAAAG	NA	False	NA	NA	False	NA	NA	NA	108140948	108140778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_108140800_108140900
m54284U_201203_174622/147587420/ccs	chr14	+	2127	8	NIC	ENSMUSG00000022035.7	novel	2230	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	86.3017960415657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCATTGATATCTGAATTC	NA	False	NA	31	True	AATAAA	-20	NA	66074805	66104056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_66074934_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
m54284U_201203_174622/147588868/ccs	chr2	-	2310	7	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	414	junction_3	22.4028767993954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTCTGATTGTCTGTCT	NA	False	NA	-20	True	NA	NA	NA	25255627	25251505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25251752_25252082_25252150_25252674_25253397_25253817_25254012_25254112_25254700_25254892_25255098_25255338
m54284U_201203_174622/147588952/ccs	chr12	-	3117	1	Intergenic	novelGene_6655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTGTCTATGTCGTT	NA	False	NA	NA	False	NA	NA	NA	55601765	55598648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_55598600_55601800
m54284U_201203_174622/147589343/ccs	chr6	+	3056	23	NNC	ENSMUSG00000023403.15	novel	1251	10	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	36	junction_21	66.1650827991485	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	124	False	NA	NA	False	AATAAA	-22	NA	49372488	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_49372512_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
m54284U_201203_174622/147589518/ccs	chr7	+	2319	8	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	339.143458899454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896233_43896661_43896841_43897333_43897484_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/147652766/ccs	chr1	+	5503	28	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	63.0144887208626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4070	False	NA	20	True	AATAAA	-24	NA	87781008	87872212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87781179_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
m54284U_201203_174622/147654028/ccs	chr8	+	2379	4	NIC	ENSMUSG00000047986.13	novel	2452	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	44.8503685108111	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGATTTATTTATT	NA	False	NA	11	True	ATTAAA	-24	NA	84752703	84756924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84752904_84753377_84753521_84754754_84754801_84754934
m54284U_201203_174622/147654731/ccs	chr7	+	3609	16	NIC	ENSMUSG00000035545.14	novel	3620	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_1	83.8505548911607	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	92	False	NA	20	True	ATTAAA	-20	NA	4140047	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4140122_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
m54284U_201203_174622/147720744/ccs	chr1	+	2096	16	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_3	590.490628394916	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724161	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59731770_59731888_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
m54284U_201203_174622/147786264/ccs	chr13	+	8004	10	NNC	ENSMUSG00000021763.18	novel	3546	6	NA	NA	-4543	-201	intron_retention	FALSE	canonical	3	10	junction_1	10.3923048454133	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTATTTGAATTGTC	NA	False	NA	6	True	AATAAA	-14	NA	113425149	113506845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_113425260_113453617_113453782_113454198_113457754_113459268_113459740_113464108_113464286_113478903_113479103_113483044_113483177_113488130_113488301_113502617_113502802_113504003
m54284U_201203_174622/148047365/ccs	chr9	+	2208	11	Fusion	ENSMUSG00000111394.2_ENSMUSG00000032294.18	novel	625	5	NA	NA	0	0	multi-exon	FALSE	canonical	3	73	junction_1	5292.27187132332	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	2536	False	NA	20	True	AATAAA	-20	NA	59564522	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_+_59564581_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201203_174622/14812352/ccs	chr4	-	7209	21	NIC	ENSMUSG00000063077.16	novel	6991	21	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_9	27.3957569707427	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGGCATGATCTTTAAG	7169	False	NA	NA	False	AATAAA	-16	NA	149392220	149318190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342539_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
m54284U_201203_174622/148178860/ccs	chr5	+	177	1	Intergenic	novelGene_2984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACAAAAGACTGTGCA	NA	False	NA	NA	False	NA	NA	NA	135824211	135824388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_135824200_135824400
m54284U_201203_174622/148179678/ccs	chr7	-	796	5	NNC	ENSMUSG00000003444.9	novel	1281	4	NA	NA	0	-590	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	249.415692168717	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGTTCCTGTTGCTGA	NA	False	NA	-19	True	AATGAA	-19	NA	28092133	28086160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_28086450_28086623_28086729_28090236_28090322_28090514_28090574_28091875
m54284U_201203_174622/148245014/ccs	chr17	-	3427	15	NIC	ENSMUSG00000024006.18	novel	3354	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	298.439384677242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226939	29189853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29217765_29217869_29218982_29219119_29226684
m54284U_201203_174622/148308025/ccs	chr2	+	2508	13	ISM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	0	34492	0	0	5prime_fragment	FALSE	canonical	3	17	junction_6	4.83907704698599	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGAACTGCCTAGT	NA	False	NA	NA	False	AATAAA	-14	NA	91287855	91309632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854
m54284U_201203_174622/148373504/ccs	chr17	-	3114	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_21	204.280286308174	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280653	36267710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36280537
m54284U_201203_174622/148375735/ccs	chr2	-	1965	7	NIC	ENSMUSG00000038671.16	novel	2447	8	NA	NA	0	-601	intron_retention	FALSE	canonical	3	258	junction_2	25.5891687156022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTGGTTCCCTATT	6119	False	NA	-2	True	AATAAA	-31	NA	181007154	181000278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181006192_181006397_181006505_181007011
m54284U_201203_174622/148375840/ccs	chr10	+	1965	7	NNC	ENSMUSG00000019996.18	novel	3831	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	110.886453435736	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGATGTATCTGATTGG	NA	False	NA	NA	False	AATAAA	-18	NA	20024729	20127638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_20024827_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20126340
m54284U_201203_174622/148440159/ccs	chr3	+	1510	8	NIC	ENSMUSG00000078578.10	novel	787	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	938.443848689338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTTAGCTGCCTGGAT	NA	False	NA	73	True	AATAAA	-13	NA	135144514	135171819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_135144632_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
m54284U_201203_174622/148441694/ccs	chr16	-	937	5	NIC	ENSMUSG00000023791.19	novel	993	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	167.537309277665	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTAGTTTGTCTTCA	NA	False	NA	-2	True	AATAAA	-28	NA	31918558	31903235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31918287
m54284U_201203_174622/148505134/ccs	chr19	+	4140	1	Intergenic	novelGene_9186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCCCATGTTCAGACT	NA	False	NA	NA	False	NA	NA	NA	24080109	24084249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_24080100_24084200
m54284U_201203_174622/148505144/ccs	chr5	+	3924	21	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	251.787926636684	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186421	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/148506215/ccs	chr12	+	5849	1	NIC	ENSMUSG00000020649.12	novel	2193	10	NA	NA	0	-57	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGAACTTTCATGGCAT	NA	False	NA	15	True	AATAAA	-15	NA	24758239	24764088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_24758200_24764100
m54284U_201203_174622/148572344/ccs	chr11	+	6387	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_15	41.902244891546	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9349	False	NA	9	True	AATAAA	-17	NA	107437686	107577769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
m54284U_201203_174622/148572878/ccs	chrX	+	2162	10	NIC	ENSMUSG00000041658.13	novel	2258	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_6	87.4744407114317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTGTCTGTGTTTCTT	3176	False	NA	NA	False	AATAAA	-17	NA	151922976	151954939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_151923572_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151943397_151943521_151946073_151946166_151953182_151953299_151954211
m54284U_201203_174622/148637173/ccs	chr7	+	4967	17	NIC	ENSMUSG00000035623.15	novel	11124	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	44.5132968196021	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGGCATAGATGATGAT	NA	False	NA	7	True	ATTAAA	-20	NA	97229113	97335627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_97229313_97266049_97266142_97280615_97280827_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
m54284U_201203_174622/148637703/ccs	chr19	+	5427	13	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-243	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.7521928812198	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214095	25411860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_25214357_25252111_25252199_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
m54284U_201203_174622/148704059/ccs	chr8	-	615	3	Antisense	novelGene_ENSMUSG00002075592.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	66	junction_2	70.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGTGGATGCCACATG	9563	False	NA	-15	True	TATAAA	-14	NA	111248575	111221995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_111222416_111227500_111227611_111248490
m54284U_201203_174622/148767125/ccs	chr11	-	3018	14	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_8	76.7679204451147	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860799	70833902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70834149_70834704_70834824_70834937_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
m54284U_201203_174622/148768347/ccs	chrX	+	12046	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_44	223.112822038593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTTTTCTTTCATTT	823	False	NA	NA	False	AATAAA	-16	NA	12937752	13039567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031772_13032870_13032967_13035585
m54284U_201203_174622/14878960/ccs	chr16	+	1246	1	Antisense	novelGene_ENSMUSG00000116348.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCTTGGCTCCATTA	NA	False	NA	NA	False	NA	NA	NA	8923436	8924682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_+_8923400_8924700
m54284U_201203_174622/148898028/ccs	chr11	+	202	1	Intergenic	novelGene_5942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAATCAGTCACCAGA	NA	False	NA	NA	False	NA	NA	NA	69284852	69285054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69284900_69285100
m54284U_201203_174622/148900119/ccs	chr10	+	183	1	Intergenic	novelGene_5411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATTATGTACCCA	NA	False	NA	NA	False	NA	NA	NA	75651451	75651634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75651500_75651600
m54284U_201203_174622/148900455/ccs	chrX	-	3121	6	NIC	ENSMUSG00000006423.16	novel	3467	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_3	92.4675078067966	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAACTAGCTTGTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	36127826	36112202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_36114816_36116291_36116385_36116982_36117073_36120504_36120547_36127276_36127395_36127661
m54284U_201203_174622/148963430/ccs	chr10	-	2403	12	NNC	ENSMUSG00000025364.14	novel	2432	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	595.517928618262	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTGTGTTCTCTTTG	8745	False	NA	-5	True	AATAAA	-14	NA	128401803	128393634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401637
m54284U_201203_174622/148964807/ccs	chr9	+	3403	15	NNC	ENSMUSG00000025648.19	novel	3488	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	4.23300925429402	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAATATGAGGTGGTATT	NA	False	NA	NA	False	AATAAA	-38	NA	108821015	108861296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108838654_108838740_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
m54284U_201203_174622/149030852/ccs	chr13	-	3207	10	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	48.4171686720963	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718933	55687131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55718587
m54284U_201203_174622/149031034/ccs	chrX	-	3611	10	NIC	ENSMUSG00000036022.16	novel	3536	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	33.4390914874518	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCGTAAAAGTCTGCCT	NA	False	NA	-13	True	AATAAA	-24	NA	52357897	52332301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_52335168_52342730_52342806_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
m54284U_201203_174622/149292523/ccs	chr10	-	2960	20	NNC	ENSMUSG00000020167.15	novel	2839	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_18	422.155227388079	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269481	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80264384_80264477_80266770_80266903_80269153
m54284U_201203_174622/149359102/ccs	chr13	+	185	1	Intergenic	novelGene_7029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	2136	False	NA	NA	False	NA	NA	NA	41003446	41003631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_41003400_41003600
m54284U_201203_174622/149359143/ccs	chr7	+	180	1	Intergenic	novelGene_4096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGAAAGGAAGT	6815	False	NA	NA	False	NA	NA	NA	126820822	126821002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_126820800_126821000
m54284U_201203_174622/149359184/ccs	chr16	-	5230	32	NNC	ENSMUSG00000022710.18	novel	4745	32	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_23	193.920658115944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGATGACTGCTGTGGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	8610237	8507463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523474_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
m54284U_201203_174622/149424079/ccs	chr1	+	207	1	Intergenic	novelGene_470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAATTAAAAAGTT	NA	False	NA	NA	False	NA	NA	NA	170974495	170974702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_170974500_170974700
m54284U_201203_174622/14944341/ccs	chr9	+	5176	20	NIC	ENSMUSG00000032280.17	novel	4527	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	50.0910528278973	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTGTTTTAATTGCCT	NA	False	NA	46	True	AAAAAG	-11	NA	61279664	61325779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301995_61309134_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316690_61317217_61317418_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
m54284U_201203_174622/149490086/ccs	chr16	-	7509	32	NIC	ENSMUSG00000022533.15	novel	7220	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	55.44721219566	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAATATTTTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	30207655	30131240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_30134720_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163339_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30178486_30178568_30180237_30180309_30180631_30180803_30181393_30181568_30185652_30185754_30206424_30206471_30207165
m54284U_201203_174622/149619131/ccs	chr3	+	4204	18	NIC	ENSMUSG00000037643.15	novel	614	8	NA	NA	0	-222	combination_of_known_junctions	FALSE	canonical	2	25	junction_1	242.818955155274	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAGTGGACCATTTTC	NA	False	NA	18	True	AATAAA	-14	NA	31059341	31106886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_31059399_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
m54284U_201203_174622/149620890/ccs	chrX	+	7216	39	NNC	ENSMUSG00000031314.19	novel	7331	39	NA	NA	-5108	0	intron_retention	FALSE	canonical	3	140	junction_1	53.245290325326	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGAGTGATTTTAAGTAG	NA	False	NA	NA	False	AATAAA	-24	NA	100571231	100644640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
m54284U_201203_174622/149948118/ccs	chr2	+	3777	21	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	357.769405483476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783049_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201203_174622/149948377/ccs	chr18	+	2314	14	NNC	ENSMUSG00000025423.17	novel	2633	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_13	391.59237954278	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTCTAATTAAAGATG	7936	False	NA	13	True	AATAAA	-26	NA	77152940	77240813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240336
m54284U_201203_174622/149949263/ccs	chr5	+	6981	48	NIC	ENSMUSG00000007080.15	novel	7163	49	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	55.4813824050172	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTCTGCCTCTCGTCTG	NA	False	NA	48	True	AGTAAA	-39	NA	110434242	110485340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
m54284U_201203_174622/149949273/ccs	chr10	+	4549	18	NIC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-269	0	intron_retention	FALSE	canonical	3	30	junction_1	82.0204633087627	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25308227	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_25308782_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201203_174622/150014019/ccs	chr1	-	2264	7	NNC	ENSMUSG00000026158.12	novel	4844	7	NA	NA	-66	651	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	17.2046505340853	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAAGGATTTTTTTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	23422322	23408153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417889_23418052_23418140_23421895
m54284U_201203_174622/150014649/ccs	chr8	-	1481	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38828	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_6	46.881647676771	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633351	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43583726_43589312_43589411_43589573_43589597_43591603_43591835_43593679_43593776_43595725_43595759_43633233
m54284U_201203_174622/150078245/ccs	chr17	+	2326	2	NNC	ENSMUSG00000039518.8	novel	2678	2	NA	NA	-9027	-269	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACTATTTGCCTTCTTG	6799	False	NA	2	True	AATAAA	-16	NA	35853997	35867808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35854073_35865557
m54284U_201203_174622/15009253/ccs	chr17	-	1962	11	NNC	ENSMUSG00000024246.10	novel	2239	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.4774669479293	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGCTTATAGACTC	8149	False	NA	NA	False	ATTAAA	-22	NA	81372511	81333760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81347860_81347975_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
m54284U_201203_174622/150143289/ccs	chr2	-	200	1	Intergenic	novelGene_580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGCACAGATCATTAAA	NA	False	NA	NA	False	AAAAAG	-6	NA	5968844	5968644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_5968600_5968800
m54284U_201203_174622/150144531/ccs	chr2	+	12181	24	NNC	ENSMUSG00000033943.16	novel	2110	5	NA	NA	-24398	0	intron_retention	TRUE	canonical	3	67	junction_1	51.1541648571319	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTGGGAGGTTTGT	8254	False	NA	14	True	AATAAA	-25	NA	119703310	119798230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_119703365_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119768972_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
m54284U_201203_174622/150145297/ccs	chr13	-	185	1	Intergenic	novelGene_6953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGGAGTGAGAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	7191271	7191086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_7191100_7191300
m54284U_201203_174622/150209252/ccs	chr1	+	9266	15	NNC	ENSMUSG00000026380.11	novel	9269	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_14	461.494135103247	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCTGGAACCTCAACTT	NA	False	NA	19	True	AATAAA	-20	NA	118555675	118612898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605120
m54284U_201203_174622/150405209/ccs	chr17	-	3503	15	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_5	130.49218054609	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201203_174622/150406734/ccs	chr3	-	3335	6	NIC	ENSMUSG00000027708.15	novel	4980	7	NA	NA	0	523	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	59.8351067518058	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCTTCTCCCATATTA	NA	False	NA	NA	False	AATAAA	-23	NA	35986985	35947131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_35949849_35951612_35951710_35951941_35952025_35973149_35973319_35975119_35975337_35986933
m54284U_201203_174622/150407815/ccs	chr11	+	1510	8	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_2	49.0289377275694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993901	103003026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102993972_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
m54284U_201203_174622/150408010/ccs	chr9	-	3295	15	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	0	-166	intron_retention	FALSE	canonical	0	0	junction_9	80.5504341948545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6378	False	NA	-27	True	AATAAA	-27	NA	44272967	44259390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
m54284U_201203_174622/150471022/ccs	chr4	-	3570	9	NIC	ENSMUSG00000028893.9	novel	3475	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	666	junction_4	63.1169549328863	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGCTAATGGGATGTT	NA	False	NA	-31	True	AATAAA	-22	NA	132237812	132219342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226739_132227076_132227275_132229873_132229940_132237374
m54284U_201203_174622/150472636/ccs	chr14	+	3394	25	NIC	ENSMUSG00000000365.10	novel	5264	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	115.170043365837	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATTGGTTTCCTTTTTT	NA	False	NA	8	True	ATTAAA	-16	NA	56640153	56726892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_56640282_56643033_56643129_56658531_56658624_56663056_56663129_56665344_56665446_56668934_56669107_56671777_56671855_56672053_56672129_56676060_56676366_56678987_56679078_56697422_56697582_56699337_56699528_56700480_56700650_56703083_56703275_56705121_56705264_56708747_56708902_56712854_56712971_56715045_56715164_56718148_56718267_56719423_56719652_56720530_56720682_56720820_56720940_56722610_56722702_56724418_56724535_56726767
m54284U_201203_174622/150537731/ccs	chr2	+	1622	5	ISM	ENSMUSG00000017868.17	ENSMUST00000018012.14	2693	14	11877	0	1095	0	3prime_fragment	FALSE	canonical	3	12	junction_3	4.54835134966506	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTACTGGGTATGGTTG	NA	False	NA	14	True	ATTAAA	-15	NA	162841126	162856047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_162841189_162845191_162845288_162846066_162846223_162848713_162848804_162854829
m54284U_201203_174622/150538268/ccs	chr16	+	3098	17	NNC	ENSMUSG00000022855.10	novel	4499	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_11	115.776657297574	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGATAATTTTTCCTC	2230	False	NA	22	True	AATAAA	-22	NA	21828261	21866631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857271_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
m54284U_201203_174622/150538925/ccs	chr11	+	1739	9	NIC	ENSMUSG00000034175.14	novel	2333	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	72.0831767821036	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTCCTGAGTGTCAG	NA	False	NA	18	True	AATAAA	-19	NA	5049432	5056093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_5049478_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
m54284U_201203_174622/150602980/ccs	chr11	-	176	1	Intergenic	novelGene_5969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAGAAAGAAGAAA	7701	False	NA	NA	False	NA	NA	NA	71011579	71011403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_71011400_71011600
m54284U_201203_174622/150603191/ccs	chr17	-	4309	13	NIC	ENSMUSG00000002625.11	novel	2102	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	144	junction_9	69.6061838727949	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201203_174622/150603771/ccs	chr11	+	3444	11	NNC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_4	22.7473075329807	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTATTGGTTTCCTA	NA	False	NA	35	True	AATAAA	-37	NA	75239320	75296531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278316_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
m54284U_201203_174622/150604154/ccs	chr9	+	4257	23	NIC	ENSMUSG00000034252.15	novel	3495	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	114.336280873426	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTAATTTGATATTCTTT	NA	False	NA	7	True	AATAAA	-18	NA	79974184	80051453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
m54284U_201203_174622/150604501/ccs	chr1	-	3563	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	289	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_21	136.421571026441	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCATGCCAGAAAAGTCC	NA	False	NA	-19	True	GATAAA	-39	NA	180971769	180920534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966867_180969882_180969965_180971615
m54284U_201203_174622/15073294/ccs	chr9	-	5385	3	NIC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	0	-232	combination_of_known_splicesites	FALSE	canonical	2	14	junction_2	227.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141014	108082064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108086861_108095211_108095610_108140823
m54284U_201203_174622/15073860/ccs	chrX	+	3269	16	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	119	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_15	45.6783926551226	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCCATTGACCTTGA	NA	False	NA	7	True	AATAAA	-18	NA	158197686	158281753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279123_158280579
m54284U_201203_174622/15074594/ccs	chr14	+	2251	10	NNC	ENSMUSG00000019297.10	novel	3694	10	NA	NA	0	-1440	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_9	217.679569692997	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTTTATTTTATTT	NA	False	NA	23	True	NA	NA	NA	55983149	55991517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991100
m54284U_201203_174622/15074741/ccs	chr6	-	7604	19	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	803	intron_retention	FALSE	canonical	1	2	junction_13	29.7153159162073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCAAACCCATCAATATC	NA	False	NA	-5	True	ATTAAA	-45	NA	119825128	119548787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754939_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
m54284U_201203_174622/1508310/ccs	chr15	+	704	4	NNC	ENSMUSG00000022587.15	novel	1122	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_3	242.845629979211	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTATGTCCTGGTTGT	8387	False	NA	27	True	AATAAA	-15	NA	74827501	74831180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_74827567_74829628_74829727_74830117_74830238_74830759
m54284U_201203_174622/1508434/ccs	chr11	+	179	1	Intergenic	novelGene_6294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGTTTACACCCT	7522	False	NA	NA	False	NA	NA	NA	98008202	98008381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98008200_98008400
m54284U_201203_174622/1508467/ccs	chr5	+	2288	7	NIC	ENSMUSG00000008090.15	novel	2329	7	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	30.2402417685809	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGAAATTGCCTCCTT	NA	False	NA	4	True	NA	NA	NA	108842293	108854790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
m54284U_201203_174622/1508524/ccs	chr17	+	3925	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	346	junction_1	120.531281958484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8796	False	NA	32	True	AATAAA	-33	NA	35354461	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201203_174622/150864568/ccs	chr4	+	4956	23	NNC	ENSMUSG00000028312.20	novel	5404	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	98.757037619295	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTAGTACTACAGTTT	-10	True	NA	21	True	ATTAAA	-21	NA	52439251	52488260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_52439411_52440200_52440258_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
m54284U_201203_174622/150866014/ccs	chr17	-	2155	6	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	26.5736711803243	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4823	False	NA	0	True	ATTAAA	-21	NA	23805206	23794817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_23796137_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
m54284U_201203_174622/1509279/ccs	chr7	+	3040	22	NIC	ENSMUSG00000025133.10	novel	3240	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_20	102.131723224906	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTTCTAGTTTCTGG	990	False	NA	26	True	AATAAA	-14	NA	97130219	97190602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97187106_97187228_97190218
m54284U_201203_174622/150996419/ccs	chrX	+	912	6	NNC	ENSMUSG00000031226.14	novel	2638	6	NA	NA	0	326	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_5	559.857696205027	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATGACTGATCTTAGAA	NA	False	NA	22	True	AATAAA	-19	NA	104123380	104127092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126628
m54284U_201203_174622/150997102/ccs	chr14	+	2037	12	NIC	ENSMUSG00000071547.5	novel	1848	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	592	junction_6	26.239519749687	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGCTTCATTCCAGCT	NA	False	NA	20	True	AATAAA	-22	NA	30853009	30861081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
m54284U_201203_174622/151062176/ccs	chr3	-	3264	15	NIC	ENSMUSG00000041734.16	novel	7236	16	NA	NA	0	2356	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	16.1227751194086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGGGTTTCCCCCAC	NA	False	NA	NA	False	AATAAA	-20	NA	87081857	86989578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87081702
m54284U_201203_174622/151126538/ccs	chr11	+	3419	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	285.601339282574	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
m54284U_201203_174622/151127941/ccs	chr6	+	2490	19	Fusion	ENSMUSG00000025609.16_ENSMUSG00000086855.2	novel	888	6	NA	NA	0	0	multi-exon	FALSE	canonical	1	9	junction_1	207.041565576923	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTATATTTTTCTTT	NA	False	NA	17	True	AATAAA	-25	NA	31349829	31484903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr6_+_31349909_31351616_31351696_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
m54284U_201203_174622/151128434/ccs	chr1	+	973	2	Intergenic	novelGene_528	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCATTTCCTGAAGTAG	2303	False	NA	NA	False	TTTAAA	-5	NA	181856075	181857430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_181856461_181856842
m54284U_201203_174622/151193170/ccs	chr7	-	2245	12	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1050	junction_5	58.5383959607102	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761734	16738564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
m54284U_201203_174622/151257641/ccs	chr15	-	177	1	Intergenic	novelGene_7708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAAAAACCTTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	51602739	51602562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_51602600_51602700
m54284U_201203_174622/151259424/ccs	chr4	+	155	1	Intergenic	novelGene_2320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	143069891	143070046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_143069900_143070000
m54284U_201203_174622/151259477/ccs	chr14	+	4662	27	NIC	ENSMUSG00000025555.15	novel	797	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	30.9907649920569	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	False	NA	35	True	NA	NA	NA	121272611	121521156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_121272751_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
m54284U_201203_174622/151259509/ccs	chr6	-	2256	17	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_16	237.881765536999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47571827
m54284U_201203_174622/151323672/ccs	chr2	+	4306	6	NNC	ENSMUSG00000094786.2	novel	701	4	NA	NA	0	2548	intron_retention	FALSE	canonical	3	38	junction_3	82.9216497665115	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177190007	177204104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_177190111_177193535_177193591_177194885_177194988_177198701_177198829_177199035_177199097_177200246
m54284U_201203_174622/15138906/ccs	chr5	+	2809	1	NIC	ENSMUSG00000025825.13	novel	957	5	NA	NA	-7	-1435	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	3643	False	NA	NA	False	NA	NA	NA	113910856	113913665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_113910900_113913700
m54284U_201203_174622/151390130/ccs	chr9	+	1684	11	NNC	ENSMUSG00000032279.12	novel	1812	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	555.128237437081	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATCCATAATGAATGA	NA	False	NA	46	True	AATAAA	-13	NA	54493764	54511220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_54493828_54497141_54497181_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
m54284U_201203_174622/151390131/ccs	chr14	+	199	1	Intergenic	novelGene_7540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAACCATCAGGGG	NA	False	NA	NA	False	NA	NA	NA	76001849	76002048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_76001800_76002000
m54284U_201203_174622/15140158/ccs	chr11	+	6041	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	70.7477792152438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540320	74561673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
m54284U_201203_174622/15141712/ccs	chr6	+	1463	7	NIC	ENSMUSG00000030330.16	novel	1629	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	40.4533338826632	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGCGGTGATAGT	7107	False	NA	7	True	AATAAA	-17	NA	125016798	125026228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_125016861_125020916_125020989_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
m54284U_201203_174622/151455791/ccs	chr7	+	2159	6	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	0	222	intron_retention	FALSE	canonical	3	200	junction_2	32.121021154378	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCATGCCCTGTCTGTCC	1943	False	NA	64	True	AATAAA	-38	NA	126461610	126464312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_126461689_126461771_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
m54284U_201203_174622/151522132/ccs	chr16	-	2958	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	73.5813065777304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534867	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20528319_20528475_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201203_174622/151584896/ccs	chr11	+	4237	17	NIC	ENSMUSG00000043857.17	novel	4258	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	8.87764045228235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGGATTTTTTGTCTT	1808	False	NA	NA	False	AATAAA	-32	NA	116809688	116877774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_116810370_116814165_116814279_116822448_116822597_116835690_116835807_116836317_116836392_116837297_116837469_116838052_116838218_116839340_116839511_116857532_116857665_116859210_116859345_116864126_116864243_116868506_116868663_116868887_116869035_116869189_116869307_116874417_116874493_116875700_116875958_116876309
m54284U_201203_174622/151650324/ccs	chr7	-	1604	12	NNC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	209	-71	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_11	690.504355136743	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89629460	89603938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629274
m54284U_201203_174622/151650587/ccs	chr17	+	183	1	Intergenic	novelGene_8456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTAAAAAAATATA	NA	False	NA	NA	False	NA	NA	NA	28406469	28406652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_28406500_28406700
m54284U_201203_174622/151716139/ccs	chr16	-	2219	5	NIC	ENSMUSG00000022661.15	novel	2347	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	11.6270159542335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGAATTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-7	NA	45229370	45202497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45229218
m54284U_201203_174622/151717481/ccs	chr4	-	5755	17	NIC	ENSMUSG00000055296.15	novel	15981	18	NA	NA	0	2751	combination_of_known_junctions	FALSE	canonical	3	49	junction_13	10.0853777197485	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTTTTCGGAACTCAAA	-8	True	NA	-17	True	NA	NA	NA	56947437	56877124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
m54284U_201203_174622/151783656/ccs	chr8	+	3266	10	NIC	ENSMUSG00000002948.20	novel	1578	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_8	93.9027603165196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTGTCCTAAGCCTGG	NA	False	NA	20	True	AATAAA	-21	NA	4288828	4297897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4295542_4295589_4295694
m54284U_201203_174622/151849372/ccs	chr13	-	1947	16	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	328	junction_3	2225.38409568626	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5157	False	NA	-5	True	AATAAA	-14	NA	58549924	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540291_58541009_58541180_58541505_58541574_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
m54284U_201203_174622/151849628/ccs	chr7	-	156	1	Intergenic	novelGene_3798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	37869250	37869094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_37869100_37869200
m54284U_201203_174622/151914409/ccs	chr17	+	4534	5	NIC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	109.937197981393	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748138	88797961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_88748313_88783283_88783379_88786703_88786769_88791828_88791898_88793830
m54284U_201203_174622/152043903/ccs	chr7	+	3153	6	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	301.065707113912	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/152044036/ccs	chr16	+	5916	30	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_17	37.819554046182	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959842	20051323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
m54284U_201203_174622/152045746/ccs	chr1	-	4152	27	NNC	ENSMUSG00000026313.17	novel	8100	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_26	27.7003460555574	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6554	False	NA	NA	False	AAGAAA	-10	NA	92108063	91860478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896059_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909990_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
m54284U_201203_174622/152110439/ccs	chr17	-	3577	9	NIC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	243	junction_5	21.9199538092579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26160909	26145400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
m54284U_201203_174622/152110989/ccs	chr14	+	4384	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_39	182.114355271056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
m54284U_201203_174622/152175217/ccs	chr11	+	7481	41	NIC	ENSMUSG00000000631.21	novel	6202	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	24.9639615245658	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	False	NA	19	True	AATAAA	-20	NA	77656428	77756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_77656543_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
m54284U_201203_174622/152240497/ccs	chr17	+	2565	8	NIC	ENSMUSG00000002307.17	novel	2581	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	219.15347338785	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTCCTTTACTTTGCCT	5622	False	NA	12	True	AATAAA	-23	NA	34128471	34134564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132779_34133037_34134316
m54284U_201203_174622/152240747/ccs	chr8	+	1497	9	NNC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	5892	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	79.2668554630496	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	614	False	NA	5	True	NA	NA	NA	70611322	70620138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70611545_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
m54284U_201203_174622/152242862/ccs	chr6	-	1525	8	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	135.189662688976	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354337	113343615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_113344142_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
m54284U_201203_174622/152307683/ccs	chr15	+	4544	32	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	8696	0	-3791	0	3prime_fragment	FALSE	canonical	3	538	junction_3	90.1454368888601	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	32	False	NA	30	True	ATTAAA	-20	NA	12833644	12935377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
m54284U_201203_174622/152372733/ccs	chrX	-	7531	6	NNC	ENSMUSG00000056537.12	novel	7439	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	86.0729922798087	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTTTTTCATCCTT	2373	False	NA	-1	True	AATAAA	-16	NA	103024890	103000768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022109_103022202_103022878_103022941_103024668
m54284U_201203_174622/152437372/ccs	chr11	-	3058	14	NIC	ENSMUSG00000020368.16	novel	4281	15	NA	NA	54	-486	combination_of_known_splicesites	FALSE	canonical	3	64	junction_13	1113.64891475071	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8190	False	NA	-2	True	AATAAA	-23	NA	50216446	50185779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50216319
m54284U_201203_174622/152504290/ccs	chr8	+	190	1	Intergenic	novelGene_4354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCCCACTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	79249046	79249236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_79249000_79249200
m54284U_201203_174622/152569673/ccs	chr15	-	2795	15	NIC	ENSMUSG00000022464.15	novel	3932	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1416	junction_7	94.5166004207834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCCGTGCAGTGCAGT	NA	False	NA	-12	True	ATTAAA	-23	NA	96953837	96894648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_96894973_96896323_96896422_96897369_96897515_96903700_96903826_96906293_96906395_96906538_96906619_96906743_96907887_96907995_96908079_96908164_96908247_96910780_96910874_96911318_96911393_96914008_96914125_96914641_96914733_96917604_96917743_96953735
m54284U_201203_174622/152635459/ccs	chr10	+	4425	29	NIC	ENSMUSG00000039994.16	novel	4457	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	73.5504824551665	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6606	False	NA	11	True	AATAAA	-41	NA	128067948	128088801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128068045_128075710_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
m54284U_201203_174622/152635920/ccs	chr1	-	3665	12	NIC	ENSMUSG00000015961.9	novel	2771	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	944	junction_8	79.6623037868483	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTGTGTTGTTTTTC	NA	False	NA	-3	True	ATTAAA	-22	NA	177624067	177590741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_177591864_177595220_177595371_177597490_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
m54284U_201203_174622/15272079/ccs	chr17	+	5726	20	NIC	ENSMUSG00000024052.18	novel	1112	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_7	6.20606440967734	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTGGGCTCCTTCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	71490550	71556812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_71490740_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
m54284U_201203_174622/15272096/ccs	chr6	+	3657	11	NIC	ENSMUSG00000079511.9	novel	3628	12	NA	NA	-16	0	intron_retention	FALSE	canonical	2	2	junction_2	302.917629067705	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATTTTTCTCAGGTTGT	217	False	NA	NA	False	ATTAAA	-19	NA	83078581	83086920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83079620_83079938_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83084614_83084735_83084936_83085071_83086185_83086294_83086408_83086502
m54284U_201203_174622/15272758/ccs	chr19	-	4152	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	105.935646083418	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3860	False	NA	-1	True	AATAAA	-20	NA	7319225	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7319131
m54284U_201203_174622/152765200/ccs	chr16	-	3451	7	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	0	-65	intron_retention	FALSE	canonical	0	0	junction_6	1043.39468669446	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGATGGTTCTGTATG	1021	False	NA	-16	True	AATAAA	-24	NA	11021128	11010898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_11011602_11012323_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
m54284U_201203_174622/152832066/ccs	chr5	+	175	1	Intergenic	novelGene_3021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAAGAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	140386801	140386976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_140386800_140387000
m54284U_201203_174622/152896956/ccs	chr3	+	5202	5	NIC	ENSMUSG00000047213.15	novel	3196	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	187.495833287036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237399	16271201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_16237685_16241130_16241280_16243641_16243728_16257989_16259589_16268118
m54284U_201203_174622/152961739/ccs	chr7	+	172	1	Intergenic	novelGene_3916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACCAGGCTGTCAT	NA	False	NA	NA	False	NA	NA	NA	79930309	79930481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79930300_79930500
m54284U_201203_174622/152962914/ccs	chr4	+	2809	5	NNC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36.1731944953718	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_147637884_147646898_147646979_147661481_147661587_147665716_147665826_147667290
m54284U_201203_174622/153026747/ccs	chr18	+	6703	34	NIC	ENSMUSG00000024236.19	novel	7907	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	17.6671084720473	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCACATTGAATTCCAA	-8	True	NA	22	True	AATAAA	-28	NA	4920539	5119299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
m54284U_201203_174622/153028204/ccs	chr1	-	4779	16	NIC	ENSMUSG00000041859.11	novel	3031	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	2257	junction_10	176.503245170041	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCTTTGTGCTTTAA	NA	False	NA	-12	True	AGTAAA	-24	NA	20890484	20873229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
m54284U_201203_174622/153028230/ccs	chr8	-	3559	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	0	-183	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	319.735563317293	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438299	80410273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_80411907_80412573_80412686_80414069_80414212_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
m54284U_201203_174622/153028673/ccs	chr11	-	194	1	Intergenic	novelGene_6123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGGCTGTGGGCAAGTC	9252	False	NA	NA	False	NA	NA	NA	82755527	82755333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_82755300_82755500
m54284U_201203_174622/153094879/ccs	chr3	-	4878	15	NIC	ENSMUSG00000054942.14	novel	4965	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	50.0591486877967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTTCTTAATGACT	NA	False	NA	-34	True	AATAAA	-13	NA	152046044	151979485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_151982491_151984529_151984647_151989418_151989473_151990838_151990974_151993141_151993241_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
m54284U_201203_174622/153158297/ccs	chr11	-	5130	36	NIC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	459	junction_1	289.08507892512	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTCCTCTTATTTTAAC	NA	False	NA	0	True	AATAAA	-22	NA	98915015	98883768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_98884152_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
m54284U_201203_174622/153159533/ccs	chr5	+	217	1	Intergenic	novelGene_2980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGATTTCACTTTCTTTGG	3666	False	NA	NA	False	NA	NA	NA	135719654	135719871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_135719700_135719900
m54284U_201203_174622/153223686/ccs	chr18	+	6102	23	NIC	ENSMUSG00000038773.12	novel	6363	24	NA	NA	0	339	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	70.7726104979477	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAGTAGACAAAATTCT	NA	False	NA	154	True	ATTAAA	-17	NA	34910099	34972052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
m54284U_201203_174622/153224936/ccs	chr18	+	3454	14	NIC	ENSMUSG00000024283.16	novel	1285	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	149.506288086872	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	-2	True	NA	NA	False	AATAAA	-22	NA	7869715	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_7869890_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
m54284U_201203_174622/153225031/ccs	chr11	+	6384	32	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	36.7501052969107	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9349	False	NA	9	True	AATAAA	-17	NA	107437686	107577769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_107437878_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
m54284U_201203_174622/15337090/ccs	chr1	-	4610	21	NNC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	45.3423367284925	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408262	36374810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393243_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
m54284U_201203_174622/153420244/ccs	chr10	-	2632	18	NIC	ENSMUSG00000020167.15	novel	2920	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	339.965487765997	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269481	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80246109_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
m54284U_201203_174622/153485722/ccs	chr6	-	3696	7	NNC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	45.192182214774	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1050	False	NA	2	True	AATAAA	-17	NA	48063527	48039328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_48041887_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
m54284U_201203_174622/153553145/ccs	chr19	-	194	1	Intergenic	novelGene_9076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAGACACCAGCTAGGA	NA	False	NA	NA	False	NA	NA	NA	4093538	4093344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4093300_4093500
m54284U_201203_174622/153682243/ccs	chr5	-	4744	11	NIC	ENSMUSG00000029201.15	novel	2550	12	NA	NA	97	0	intron_retention	FALSE	canonical	3	385	junction_9	44.0323744533497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCAATTTACGTATG	NA	False	NA	-13	True	AATAAA	-22	NA	65593195	65570563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
m54284U_201203_174622/153813970/ccs	chr11	-	3011	18	NIC	ENSMUSG00000020282.19	novel	2946	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	24.236436295187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTGTCACTGTTTC	NA	False	NA	-2	True	AATAAA	-35	NA	32172300	32159584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166348_32172168
m54284U_201203_174622/153879439/ccs	chr13	-	2973	13	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	186	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	426.250480612306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTTC	NA	False	NA	-2	True	AATAAA	-23	NA	111626376	111562691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111579854_111579941_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
m54284U_201203_174622/153880539/ccs	chr19	+	4065	13	NIC	ENSMUSG00000024985.21	novel	3715	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_11	22.7173147376377	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	False	NA	17	True	AATAAA	-18	NA	55730251	55922086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55915115_55915189_55919865
m54284U_201203_174622/153944583/ccs	chr16	-	1738	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	942.899436280866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1021	False	NA	-3	True	ATTAAA	-25	NA	11021128	11010833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11021014
m54284U_201203_174622/154011922/ccs	chr7	+	1764	9	NNC	ENSMUSG00000001918.18	novel	853	3	NA	NA	154	0	at_least_one_novel_splicesite	FALSE	canonical	2	41	junction_1	534.082800228579	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGTTGTCACATGTCT	NA	False	NA	73	True	NA	NA	NA	16518816	16532199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_16518953_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
m54284U_201203_174622/154012110/ccs	chr15	+	5251	2	NIC	ENSMUSG00000034333.16	novel	5425	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGACTGATGATGGCTT	NA	False	NA	35	True	ATTAAA	-22	NA	88635862	88668719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_88636006_88663611
m54284U_201203_174622/154012378/ccs	chr13	-	189	1	Intergenic	novelGene_7272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTGACAGCAACAATA	7459	False	NA	NA	False	NA	NA	NA	98543314	98543125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_98543100_98543300
m54284U_201203_174622/15402165/ccs	chr14	+	2878	7	ISM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	-98	6098	0	0	5prime_fragment	FALSE	canonical	3	175	junction_5	36.4771618047969	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCAGTTAAATGTTCTC	NA	False	NA	7	True	NA	NA	NA	20398229	20415312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330
m54284U_201203_174622/154077456/ccs	chr5	+	2663	5	NIC	ENSMUSG00000055991.16	novel	378	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	28.4901298698339	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACTTGAGGTTTCTCTC	4943	False	NA	10	True	ATTAAA	-15	NA	145145377	145158560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_145145527_145148555_145148639_145149314_145149451_145155096_145155694_145156862
m54284U_201203_174622/154208912/ccs	chr7	+	2071	13	NNC	ENSMUSG00000015165.17	novel	2142	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_5	1632.44720860703	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	False	NA	33	True	AATAAA	-36	NA	28510361	28521691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514728_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
m54284U_201203_174622/154208917/ccs	chr15	-	4507	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	0	0	intron_retention	FALSE	canonical	3	484	junction_25	49.9994775482908	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491711	76480008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
m54284U_201203_174622/154208984/ccs	chr1	-	1515	5	NIC	ENSMUSG00000025939.20	novel	2181	6	NA	NA	0	-358	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	178.300834266136	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGAGTGTGGACATT	NA	False	NA	NA	False	AATACA	-25	NA	16689508	16640363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_16641507_16652150_16652227_16655499_16655656_16672485_16672578_16689460
m54284U_201203_174622/154209008/ccs	chr7	+	183	1	Intergenic	novelGene_3606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGGTAGTGAGGT	NA	False	NA	NA	False	NA	NA	NA	3248539	3248722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3248500_3248700
m54284U_201203_174622/154337656/ccs	chr4	+	2570	19	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	40.9866358827808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048589	155065395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
m54284U_201203_174622/154405719/ccs	chr17	+	2565	11	NNC	ENSMUSG00000024301.11	novel	2631	11	NA	NA	0	-294	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	133.860225608655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTCTTAATCTTAGAT	NA	False	NA	9	True	AATAAA	-22	NA	27136064	27151263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_27136260_27139770_27139906_27139993_27140094_27140552_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
m54284U_201203_174622/154469679/ccs	chr13	+	3098	20	NIC	ENSMUSG00000021314.14	novel	3367	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_16	14.1794982896135	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTTTTTCAAGAGTG	NA	False	NA	19	True	AATAAA	-24	NA	19132520	19335091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305490_19321705_19321913_19323341_19323603_19326134_19326237_19333905
m54284U_201203_174622/154471155/ccs	chr7	-	3556	24	NNC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	285.20392995805	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6928	False	NA	0	True	NA	NA	NA	126101586	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126091368_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
m54284U_201203_174622/154533899/ccs	chr2	+	1656	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_4	102.88192261034	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5681	False	NA	19	True	AATAAA	-21	NA	22785606	22830278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802528_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
m54284U_201203_174622/154535610/ccs	chr3	+	999	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	0	26519	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_4	230.312152306386	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGGCTGTGTTGTC	140	False	NA	NA	False	NA	NA	NA	89366424	89402839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402534
m54284U_201203_174622/154599517/ccs	chr9	-	4778	1	NIC	ENSMUSG00000031969.17	novel	2885	11	NA	NA	0	-3749	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAACAAAAAAAAA	9248	False	NA	NA	False	NA	NA	NA	26910845	26906067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_26906100_26910800
m54284U_201203_174622/154602235/ccs	chrX	-	6443	10	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_9	64.4373559319916	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTGAAGCATTTAAT	NA	False	NA	-1	True	AATAAA	-16	NA	104972976	104909151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
m54284U_201203_174622/154666273/ccs	chr11	-	2069	11	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_9	25.5305699113827	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGAATGGCACCAGTG	NA	False	NA	-13	True	ATTAAA	-13	NA	106084398	106054155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
m54284U_201203_174622/15467319/ccs	chr4	-	3557	9	NIC	ENSMUSG00000028826.15	novel	3826	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_8	62.8743787245647	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCCTGCCTTTTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	134580656	134530069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134580348
m54284U_201203_174622/15468857/ccs	chr13	-	5988	17	NIC	ENSMUSG00000021706.15	novel	6150	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	9.64931992422264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTCATTTTGTTTACATA	NA	False	NA	NA	False	AATAAA	-44	NA	92667376	92623615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92655974_92656072_92657623_92659840_92660737_92660847_92667206
m54284U_201203_174622/154732229/ccs	chr1	+	2099	9	NNC	ENSMUSG00000026457.15	novel	3446	8	NA	NA	0	-1013	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	420.759135373197	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCTTGGCATTCAAAGAG	NA	False	NA	6	True	AATAAA	-14	NA	134343193	134360073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_134343324_134343657_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
m54284U_201203_174622/154796033/ccs	chr4	+	5355	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	148.559630178662	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/154862181/ccs	chr3	+	2803	14	NIC	ENSMUSG00000028101.19	novel	2931	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_10	45.862026163123	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGGAAGGGATGTTGT	3287	False	NA	16	True	AATAAA	-26	NA	96604398	96613289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610945_96611054_96611224_96611374_96611509_96611664_96611703_96612164
m54284U_201203_174622/154927605/ccs	chr15	-	1083	4	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	3259	16	0	0	3prime_fragment	FALSE	canonical	3	19	junction_3	7.87400787401181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACCAAAATACC	8254	False	NA	NA	False	NA	NA	NA	81578229	81570381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_81570604_81576308_81576508_81577187_81577355_81577734
m54284U_201203_174622/154994054/ccs	chrX	+	3341	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	151	junction_11	167.554634539172	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
m54284U_201203_174622/155058318/ccs	chr11	+	180	1	Intergenic	novelGene_5882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAGAGTTTAAA	NA	False	NA	NA	False	NA	NA	NA	59969374	59969554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59969400_59969600
m54284U_201203_174622/155060376/ccs	chr13	+	2157	11	NIC	ENSMUSG00000021218.11	novel	4303	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	580.528517818031	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTGGTATTGAGTGTCT	NA	False	NA	35	True	AATAAA	-18	NA	3588127	3615820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_3588344_3598862_3598971_3600988_3601089_3604441_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
m54284U_201203_174622/155060536/ccs	chr10	+	3227	15	NNC	ENSMUSG00000058799.17	novel	1350	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	35	junction_5	602.358243972499	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGATATTTGAAGTT	NA	False	NA	NA	False	AATAAA	-24	NA	111309087	111334011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111325899_111326274_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
m54284U_201203_174622/155189816/ccs	chr17	+	5849	1	Antisense	novelGene_ENSMUSG00000117341.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGGTATCATCAGTCAG	NA	False	NA	NA	False	NA	NA	NA	9929722	9935571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_9929700_9935600
m54284U_201203_174622/155322453/ccs	chr10	-	3916	10	NIC	ENSMUSG00000055531.13	novel	2200	10	NA	NA	0	1750	combination_of_known_junctions	FALSE	canonical	3	201	junction_2	131.387279764636	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTGCAGTGTCTCCTA	4471	False	NA	-3	True	AATAAA	-17	NA	117212878	117183193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_117185373_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
m54284U_201203_174622/15534007/ccs	chr11	+	6969	24	NIC	ENSMUSG00000020790.15	novel	7154	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	78	junction_3	29.9114003593208	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAGTGTAAACTTT	NA	False	NA	16	True	AATAAA	-17	NA	72580831	72662047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72580861_72602982_72603176_72605190_72605310_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
m54284U_201203_174622/15534016/ccs	chr11	-	3665	20	NNC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-508	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_18	105.114711116355	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	3801	False	NA	-4	True	ATTAAA	-19	NA	60111430	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60097782_60097907_60098084_60111278
m54284U_201203_174622/15534684/ccs	chr17	-	214	1	Intergenic	novelGene_8573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGATGCAAGTTTGATT	6263	False	NA	NA	False	NA	NA	NA	36105422	36105208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_36105200_36105400
m54284U_201203_174622/155386092/ccs	chr7	-	166	1	Intergenic	novelGene_3922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCTTTTAAAAAAATCC	NA	False	NA	NA	False	NA	NA	NA	80430969	80430803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_80430800_80431000
m54284U_201203_174622/155386466/ccs	chr7	+	3241	5	NIC	ENSMUSG00000040952.17	novel	593	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	8873	junction_4	6185.21555808688	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTCTGGATCTGGTTT	NA	False	NA	26	True	AATAAA	-16	NA	24584057	24589231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_24584093_24584560_24584632_24584876_24587891_24588331_24588387_24589165
m54284U_201203_174622/155386645/ccs	chr2	-	2545	17	NIC	ENSMUSG00000026915.17	novel	3144	18	NA	NA	0	-502	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	175.919537271305	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGAGTACTGCCTGGTTC	NA	False	NA	-5	True	AATAAA	-15	NA	37593360	37473669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37593203
m54284U_201203_174622/155451900/ccs	chr16	-	2580	11	NNC	ENSMUSG00000034064.15	novel	2758	11	NA	NA	0	-138	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_10	287.761081454737	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCCTGTGTACCTCAC	6230	False	NA	0	True	TTTAAA	-26	NA	38370620	38345639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369759_38370444
m54284U_201203_174622/155452179/ccs	chr11	+	4537	1	NIC	ENSMUSG00000048070.5	novel	4200	2	NA	NA	0	-13359	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAGAGGGAGGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	66802806	66807343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_66802800_66807300
m54284U_201203_174622/155452219/ccs	chrX	-	6585	11	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	99.6897687829599	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTGAAGCATTTAAT	NA	False	NA	-1	True	AATAAA	-16	NA	104972976	104909151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104954179_104954250_104955075_104955261_104972564
m54284U_201203_174622/155452702/ccs	chr14	+	4085	8	NIC	ENSMUSG00000021939.9	novel	4743	10	NA	NA	0	1263	intron_retention	FALSE	canonical	3	6333	junction_1	530.847531821347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTGACATTGGCAGGG	NA	False	NA	17	True	AATAAA	-12	NA	63359962	63380575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
m54284U_201203_174622/155518177/ccs	chr1	-	6402	29	NNC	ENSMUSG00000056050.16	novel	6330	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	45.1999525916313	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGTCTGCTGATTCT	4043	False	NA	-1	True	CATAAA	-18	NA	183150894	183107681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_183108509_183109058_183109201_183110440_183110513_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
m54284U_201203_174622/155519133/ccs	chr8	-	1477	11	NNC	ENSMUSG00000035439.14	novel	2013	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_2	129.85010589137	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACAGTGTGATGCGTTTG	594	False	NA	-9	True	NA	NA	NA	71725122	71703768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_71704189_71705714_71705819_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
m54284U_201203_174622/155519654/ccs	chr7	-	5096	19	NIC	ENSMUSG00000035401.10	novel	7693	20	NA	NA	0	-572	combination_of_known_junctions	FALSE	canonical	3	18	junction_15	18.2976082900417	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAATGTTGAACTGTAT	3690	False	NA	-5	True	TATAAA	-16	NA	98305802	98238714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98295655_98295731_98297011_98297112_98303950_98304060_98305680
m54284U_201203_174622/155519661/ccs	chr5	+	4371	3	NIC	ENSMUSG00000038181.17	novel	3715	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTTTTAGGTCTAGG	NA	False	NA	3	True	ATTAAA	-14	NA	24791738	24797482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_24793299_24794094_24795490_24796066
m54284U_201203_174622/155582511/ccs	chr13	-	3742	13	NNC	ENSMUSG00000041747.4	novel	4120	13	NA	NA	0	-692	at_least_one_novel_splicesite	TRUE	canonical	2	20	junction_12	110.385026913376	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGCTGTCCTTATCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	98399521	98384044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399040
m54284U_201203_174622/155582573/ccs	chr14	-	1470	4	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	82.8908251188809	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCTTTTTGGC	8876	False	NA	1	True	AATAAA	-20	NA	51033185	51026704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_51027470_51029468_51029764_51031014_51031332_51033092
m54284U_201203_174622/155584021/ccs	chr12	+	4403	21	NIC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_2	164.86857644803	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3986	False	NA	13	True	AATAAA	-13	NA	83679030	83729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_83679192_83685901_83685966_83689175_83689294_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
m54284U_201203_174622/155584283/ccs	chr1	-	6978	10	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	144	junction_5	94.521537162989	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953095	132913957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
m54284U_201203_174622/155715574/ccs	chr2	-	2561	10	NIC	ENSMUSG00000039536.17	novel	2860	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	93.449927174337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTGTTAATTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	166838219	166790192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166837953
m54284U_201203_174622/155716307/ccs	chr15	+	3617	15	NNC	ENSMUSG00000037579.8	novel	3225	2	NA	NA	-267	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	6.13787173112595	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAACTCAGTACTTT	NA	False	NA	7	True	AATAAA	-8	NA	99122474	99140698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_99122585_99124188_99124423_99124861_99124997_99125789_99125924_99126353_99126598_99126939_99127098_99127186_99127395_99130573_99130886_99131129_99131330_99131747_99131998_99135955_99136174_99137475_99137808_99138767_99138875_99139630_99139708_99139800
m54284U_201203_174622/155716409/ccs	chrX	+	3426	5	NNC	ENSMUSG00000054994.3	novel	3698	5	NA	NA	0	161	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	89.2226848957147	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTTCTTCGTGAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	134395336	134405504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_134395469_134395666_134395786_134400016_134400317_134402052_134402205_134402781
m54284U_201203_174622/155779692/ccs	chr2	+	2967	12	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	0	-299	intron_retention	TRUE	canonical	3	416	junction_6	46.7767689745934	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGATCCCATGAAT	NA	False	NA	39	True	ATTAAA	-26	NA	25162489	25175628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25162690_25162926_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
m54284U_201203_174622/155779837/ccs	chr11	-	3547	20	NIC	ENSMUSG00000002814.16	novel	2932	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_19	35.8833907056155	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTGGCATTCAGT	NA	False	NA	0	True	AATAAA	-15	NA	60668113	60630884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747_60667903_60668017
m54284U_201203_174622/155845598/ccs	chrX	-	192	1	Intergenic	novelGene_9439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTTCGGGTCAGTGGC	NA	False	NA	NA	False	NA	NA	NA	41038758	41038566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_41038600_41038800
m54284U_201203_174622/155847283/ccs	chr10	+	5780	24	ISM	ENSMUSG00000034813.20	ENSMUST00000147356.9	4145	25	-281	10121	-281	0	5prime_fragment	FALSE	canonical	0	0	junction_1	2.635370862729	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAATGACCT	NA	False	NA	NA	False	AATAAA	-23	NA	119289453	119913044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_119290328_119733619_119733701_119765805_119765942_119767148_119767295_119774148_119774233_119778766_119778843_119780930_119781077_119811774_119811923_119814342_119814513_119821378_119821535_119822236_119822390_119835656_119835844_119836430_119836577_119846110_119846192_119853977_119854048_119855865_119856012_119871255_119871401_119874195_119874336_119874503_119874699_119885255_119885413_119885909_119886022_119890737_119890972_119908535_119908683_119911194
m54284U_201203_174622/155910863/ccs	chr9	+	1040	7	NNC	ENSMUSG00000032478.15	novel	1074	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	213.241191038588	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGCAAGCTTTCTCT	NA	False	NA	25	True	AATAAA	-32	NA	109661854	109672042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_109661876_109662263_109662364_109664390_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
m54284U_201203_174622/155911419/ccs	chr14	+	1955	10	NNC	ENSMUSG00000021939.9	novel	801	6	NA	NA	220	1263	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_1	2359.23660492641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTGACATTGGCAGGG	NA	False	NA	17	True	AATAAA	-12	NA	63360182	63380575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_63360296_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
m54284U_201203_174622/155911621/ccs	chr2	-	190	1	Intergenic	novelGene_1089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAGAGGGAACGTGG	NA	False	NA	NA	False	NA	NA	NA	140050149	140049959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_140050000_140050100
m54284U_201203_174622/155912839/ccs	chrX	+	2105	10	NIC	ENSMUSG00000019087.14	novel	2189	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	212.313069560432	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGGGCTTCGTGTCACT	NA	False	NA	14	True	AATAAA	-19	NA	73340748	73348295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344965_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
m54284U_201203_174622/15598107/ccs	chr9	-	5893	24	NIC	ENSMUSG00000034908.17	novel	4012	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	113	junction_22	16.2235097445344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGGGTCTTACTGATG	NA	False	NA	-32	True	AATAAA	-16	NA	45866479	45849172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45858115_45858281_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
m54284U_201203_174622/15599068/ccs	chr14	-	2998	21	NIC	ENSMUSG00000022020.16	novel	13223	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	55.2484388919723	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGGGTTTTTTGTTTGT	NA	False	NA	-10	True	AATAAA	-11	NA	79628218	79573075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588128_79588271_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
m54284U_201203_174622/15600127/ccs	chrX	+	5149	23	NIC	ENSMUSG00000001173.16	novel	5253	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	25.9866860380401	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGTGATCTGACTGAG	NA	False	NA	17	True	AATAAA	-18	NA	47001343	47054745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_47001569_47001845_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
m54284U_201203_174622/156042185/ccs	chr16	+	3415	9	NNC	ENSMUSG00000022800.15	novel	4312	9	NA	NA	0	-843	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	186.1677670812	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTATTCTGAGCTATAA	NA	False	NA	-5	True	AATAAA	-18	NA	32698182	32728402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_32698367_32704515_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
m54284U_201203_174622/156042419/ccs	chr18	-	1160	5	NIC	ENSMUSG00000024592.16	novel	2400	5	NA	NA	0	517	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	31.2329953734828	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACATGTGTTTTTGTAC	NA	False	NA	NA	False	TATAAA	-4	NA	57108440	57090168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108381
m54284U_201203_174622/156044048/ccs	chr17	-	1540	10	NIC	ENSMUSG00000036820.13	novel	1496	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	306	junction_8	20.5804653872442	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGCGTCATGCTTTG	NA	False	NA	-12	True	GATAAA	-20	NA	24382704	24374806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382307_24382555
m54284U_201203_174622/156107187/ccs	chr17	-	2742	16	NIC	ENSMUSG00000002625.11	novel	1987	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_5	144.599677270271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTCGTTTGTGCTGTGG	NA	False	NA	0	True	AATAAA	-17	NA	32569581	32540397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32552879_32553671_32554084_32554145_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
m54284U_201203_174622/156108253/ccs	chr7	-	1959	8	NIC	ENSMUSG00000030881.16	novel	3275	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_3	33.0787557449287	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGTGAGGTCAATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	105289558	105284827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105285601_105286017_105286193_105286327_105286486_105286858_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
m54284U_201203_174622/156172573/ccs	chr11	+	3625	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_22	216.94794214281	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745557_115745686_115745885_115745932_115746017_115746080_115746291
m54284U_201203_174622/156173678/ccs	chr13	-	3595	20	NIC	ENSMUSG00000021597.17	novel	3747	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	34.3358836872922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATAGTCTTTAGTTG	NA	False	NA	-2	True	AATAAA	-22	NA	77283584	77191206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
m54284U_201203_174622/156240703/ccs	chrX	+	3150	10	NNC	ENSMUSG00000000134.18	novel	3277	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_9	93.1241041053931	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7628933	7641440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639821
m54284U_201203_174622/156303425/ccs	chr5	-	2356	1	FSM	ENSMUSG00000080935.4	ENSMUST00000121655.2	1293	1	-56	-1007	-56	1007	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGTGAACATGACTAGAA	1739	False	NA	NA	False	AATAAA	-31	NA	138363870	138361514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_138361500_138363900
m54284U_201203_174622/156304712/ccs	chr11	-	1215	5	NNC	ENSMUSG00000019122.9	novel	3006	4	NA	NA	-3699	657	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	25.1445819213603	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTCTGTCTGCCTCTTT	NA	False	NA	-2	True	AATAAA	-17	NA	83473161	83465486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_83466322_83466668_83466778_83467200_83467273_83469214_83469351_83473098
m54284U_201203_174622/156306257/ccs	chr16	-	1393	9	NIC	ENSMUSG00000033809.16	novel	1451	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	132.226072977307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGTGCAGCATACATAA	NA	False	NA	-8	True	AATAAA	-15	NA	20429518	20424221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429329
m54284U_201203_174622/156434502/ccs	chr15	-	2506	5	NNC	ENSMUSG00000062397.9	novel	4417	4	NA	NA	0	1627	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	3342.91462462026	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCTAATTTCTTGTACC	155	False	NA	-6	True	ATTAAA	-19	NA	37007646	36999244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_37001168_37001890_37001954_37002082_37002191_37003929_37004067_37007371
m54284U_201203_174622/156435220/ccs	chr1	+	2087	9	NIC	ENSMUSG00000026617.17	novel	1226	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	92.0101047439899	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTGCCTTTATTCCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	185064376	185089974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_185064461_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
m54284U_201203_174622/156500484/ccs	chr6	+	5012	28	NIC	ENSMUSG00000016487.16	novel	4851	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	49	junction_2	70.7910234325529	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTATTTGTCATTGTT	7539	False	NA	13	True	AATAAA	-17	NA	146789984	146933523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_146790182_146819245_146819407_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
m54284U_201203_174622/156502863/ccs	chr7	-	181	1	Intergenic	novelGene_3788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAGTGATTGGGAGG	NA	False	NA	NA	False	NA	NA	NA	34066778	34066597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_34066600_34066800
m54284U_201203_174622/156565550/ccs	chr19	+	1719	11	NIC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	121.178422171606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTTCTCTGTGCCTCG	4139	False	NA	18	True	AATAAA	-24	NA	41921928	41932543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_41922105_41923278_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
m54284U_201203_174622/156566146/ccs	chr2	-	7698	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39360	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_32	40.7527038608767	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1530	False	NA	-4	True	AATAAA	-19	NA	59881054	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59880905
m54284U_201203_174622/156566783/ccs	chr15	+	1839	8	NIC	ENSMUSG00000009585.19	novel	826	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_4	278.410209758836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGACAAGATTAAGT	7502	False	NA	-6	True	NA	NA	NA	79775859	79792107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_79776024_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
m54284U_201203_174622/15665259/ccs	chr11	-	179	1	Intergenic	novelGene_6334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	101344360	101344181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_101344200_101344400
m54284U_201203_174622/15665735/ccs	chr7	-	6522	32	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_22	47.0465485612883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGTATTGACTTTCT	10001	False	NA	-6	True	AATAAA	-20	NA	101859352	101768604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
m54284U_201203_174622/156699153/ccs	chr10	-	199	1	Intergenic	novelGene_5572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATCAGTCTTGTGA	NA	False	NA	NA	False	NA	NA	NA	120323148	120322949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_120322900_120323100
m54284U_201203_174622/156762302/ccs	chr8	-	1621	12	NIC	ENSMUSG00000038215.16	novel	1690	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	54.5031654247927	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATATGTGCCGATTTT	NA	False	NA	-5	True	AATAAA	-18	NA	57003907	56984556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003097_57003157_57003722
m54284U_201203_174622/156763020/ccs	chr5	+	5239	9	NIC	ENSMUSG00000029283.18	novel	3679	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	249	junction_8	17.7794649807018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGAATACTTATTTAAA	NA	False	NA	10	True	AATAAA	-15	NA	107112246	107132298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107124579_107127160_107127311_107130829
m54284U_201203_174622/156764952/ccs	chr17	+	7344	32	NIC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	133	junction_20	63.9601365185812	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_13981041_14024200_14024397_14027538_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
m54284U_201203_174622/156958731/ccs	chr15	-	6108	33	NIC	ENSMUSG00000022629.18	novel	6439	37	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	8	junction_4	3.77478786655621	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTAGTCTTTTTCTAATT	9581	False	NA	NA	False	AATAAA	-25	NA	90934048	90817478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
m54284U_201203_174622/157025826/ccs	chr5	-	5608	32	NIC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	0	1370	combination_of_known_junctions	FALSE	canonical	3	24	junction_31	136.926132892471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563977	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124551247_124551353_124552461_124552591_124563909
m54284U_201203_174622/157222826/ccs	chr7	+	2180	13	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	170.723623308421	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428184	49508013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_49428250_49428328_49428462_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
m54284U_201203_174622/157223259/ccs	chr17	+	1514	1	Antisense	novelGene_ENSMUSG00000044857.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGACAGATTGATCCT	NA	False	NA	NA	False	NA	NA	NA	27422676	27424190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_27422700_27424200
m54284U_201203_174622/157223531/ccs	chr6	-	1585	7	NIC	ENSMUSG00000030127.16	novel	1817	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_6	644.566951957324	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGGAACTGGGCCTCTT	NA	False	NA	-9	True	AATAAA	-26	NA	124942501	124935778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124942364
m54284U_201203_174622/157288732/ccs	chr14	+	1372	1	Genic_Genomic	ENSMUSG00000051615.15	novel	NA	NA	NA	NA	-58	-27437	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	TTTAAA	-26	NA	120715797	120717169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr14_+_120715800_120717200
m54284U_201203_174622/15729252/ccs	chr5	+	2193	14	NNC	ENSMUSG00000064037.14	novel	3144	14	NA	NA	0	554	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	270.876180801199	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTTGTGGTAAGCTTT	NA	False	NA	22	True	GATAAA	-11	NA	31652096	31668757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_31652780_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
m54284U_201203_174622/15730209/ccs	chr11	+	4324	26	NIC	ENSMUSG00000020464.16	novel	3368	27	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_17	128.416858706324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080743	29111680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
m54284U_201203_174622/15730523/ccs	chr16	+	3096	16	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	107.073474254312	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2927	False	NA	14	True	AATAAA	-15	NA	4704115	4756160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
m54284U_201203_174622/1573250/ccs	chr9	+	3070	12	NIC	ENSMUSG00000025651.15	novel	1653	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	5755	junction_3	190.443675107444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCCTTCCTTAGA	NA	False	NA	18	True	AATAAA	-14	NA	108765781	108778691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
m54284U_201203_174622/1573485/ccs	chr15	+	3367	12	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1269	junction_11	97.5659132997612	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	195	False	NA	28	True	AATAAA	-14	NA	38662187	38692687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38690904_38691855
m54284U_201203_174622/157354467/ccs	chr12	-	3393	11	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	27.6550176279098	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	NA	False	NA	-37	True	AATAAA	-14	NA	83968641	83840844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
m54284U_201203_174622/1574127/ccs	chr6	+	5783	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	0	889	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	31.1467116572332	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAGTTTCAAGTCTTTG	NA	False	NA	-4	True	AATAAA	-14	NA	120643329	120744754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
m54284U_201203_174622/157419070/ccs	chr18	+	3917	5	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	1773	at_least_one_novel_splicesite	FALSE	canonical	3	187	junction_2	10.2713192920871	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACACGAAGGTGTCGTCT	NA	False	NA	10	True	ATTAAA	-17	NA	82990900	83021598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_82990974_83004868_83006324_83011194_83011315_83012594_83012663_83019397
m54284U_201203_174622/157419707/ccs	chr2	+	3700	11	NIC	ENSMUSG00000026965.13	novel	3004	13	NA	NA	0	-299	intron_retention	FALSE	canonical	3	416	junction_5	44.7755513645561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGATCCCATGAAT	NA	False	NA	39	True	ATTAAA	-26	NA	25162489	25175628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25162690_25162926_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
m54284U_201203_174622/157420362/ccs	chr11	-	2749	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	182.055595904108	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
m54284U_201203_174622/1574262/ccs	chr6	+	5456	18	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	0	565	combination_of_known_junctions	TRUE	canonical	3	38	junction_7	32.559447892414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTATATCCTATAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	120643329	120744430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
m54284U_201203_174622/1574398/ccs	chrX	+	4230	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4058	17	NA	NA	0	0	multi-exon	FALSE	canonical	3	204	junction_13	199.338461472497	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722187	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755911_67756020_67756846_67756930_67759170
m54284U_201203_174622/1574489/ccs	chr17	+	150	1	Intergenic	novelGene_8453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAATAAATATTT	NA	False	NA	NA	False	NA	NA	NA	27893589	27893739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27893600_27893700
m54284U_201203_174622/157484894/ccs	chrX	+	173	1	Intergenic	novelGene_9395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAGTAAGGCCC	NA	False	NA	NA	False	NA	NA	NA	13083432	13083605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_13083400_13083600
m54284U_201203_174622/157550476/ccs	chrX	-	6601	1	ISM	ENSMUSG00000031292.15	ENSMUST00000198931.2	9796	17	120263	233	8957	-233	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGACTGCCGGGCTTT	NA	False	NA	-23	True	AATAAA	-20	NA	159591221	159584620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_-_159584600_159591200
m54284U_201203_174622/157614805/ccs	chr3	+	6514	38	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_35	18.9389469278987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6185	False	NA	12	True	AAGAAA	-13	NA	87524898	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624727_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87642651_87642879_87643112_87643303_87644350
m54284U_201203_174622/157616386/ccs	chr4	+	4196	10	NIC	ENSMUSG00000040859.15	novel	2823	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	105	junction_4	12.0840676660645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGAAGTGTCCGGGGATGT	NA	False	NA	64	True	ATTAAA	-15	NA	129355476	129382291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129355499_129355734_129355796_129359022_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
m54284U_201203_174622/157681821/ccs	chr16	+	4014	9	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_4	1337.63567068915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTTATGGTCTATGAAT	NA	False	NA	17	True	AATAAA	-20	NA	84571166	84622816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
m54284U_201203_174622/157682365/ccs	chr12	-	184	1	Intergenic	novelGene_6825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACATATACAAATACT	NA	False	NA	NA	False	NA	NA	NA	87241460	87241276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_87241300_87241500
m54284U_201203_174622/157745922/ccs	chr3	-	1815	8	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_6	235.712813848219	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10416377	10405014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412472_10413569_10413613_10416301
m54284U_201203_174622/157746909/ccs	chr1	-	3109	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	-158	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_18	143.049000447139	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATTAACATCTGAACC	NA	False	NA	0	True	AATAAA	-23	NA	180971769	180920981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962626_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
m54284U_201203_174622/157810846/ccs	chr13	-	2043	16	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_15	1952.53028543876	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550202
m54284U_201203_174622/157876605/ccs	chr8	-	4357	6	NIC	ENSMUSG00000031984.9	novel	2340	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1367	junction_2	157.719244228471	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCTGTTTTGCCTAC	NA	False	NA	NA	False	AATAAA	-26	NA	125589753	125563683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125569159_125587684_125588011_125589623
m54284U_201203_174622/157877773/ccs	chr8	+	3718	11	NIC	ENSMUSG00000002342.18	novel	3018	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_1	40.4568906368248	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTCTGGCCCAGTCATGT	5880	False	NA	32	True	AATAAA	-42	NA	70625068	70635525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
m54284U_201203_174622/157878052/ccs	chr2	-	183	1	Intergenic	novelGene_1289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAAAACATCC	NA	False	NA	NA	False	NA	NA	NA	172479765	172479582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_172479600_172479800
m54284U_201203_174622/157879023/ccs	chr7	+	1108	8	NNC	ENSMUSG00000070837.7	novel	1401	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_1	154.398107210562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTGCTTGAGTGAGTT	2914	False	NA	20	True	ATTAAA	-21	NA	6998501	7006090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_6998525_6998614_6998712_6999266_6999301_6999517_6999710_7000512_7000652_7002977_7003127_7005355_7005531_7005791
m54284U_201203_174622/157942212/ccs	chr6	+	4126	23	NIC	ENSMUSG00000030016.15	novel	4356	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_20	89.2674155983207	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891352	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83960957_83961057_83961758_83961878_83963539
m54284U_201203_174622/15795309/ccs	chr5	-	4333	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_26	208.358422552391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563772
m54284U_201203_174622/15795654/ccs	chr18	+	2346	16	NIC	ENSMUSG00000035765.11	novel	2456	17	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_14	49.9165525875157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	False	NA	18	True	AATAAA	-18	NA	75151782	75420035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75376355_75376470_75419690
m54284U_201203_174622/158075016/ccs	chr8	+	3483	11	NIC	ENSMUSG00000031700.12	novel	3639	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	366.682478446953	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCAGCTTGGTCAATAA	NA	False	NA	13	True	AATAAA	-19	NA	86219204	86254189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86249884_86249998_86252164
m54284U_201203_174622/158075430/ccs	chr7	+	1744	5	NIC	ENSMUSG00000011096.18	novel	1757	5	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	123.030484027334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGTGAGTTCGTGTTG	2163	False	NA	6	True	ATTAAA	-11	NA	44499410	44504832	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44499701_44501994_44502384_44503203_44503282_44503362_44503533_44504015
m54284U_201203_174622/158138995/ccs	chr9	+	2653	5	NIC	ENSMUSG00000032567.17	novel	2755	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	18.0138835346518	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGTATTTATTTATATG	NA	False	NA	NA	False	AATACA	-16	NA	105272590	105282666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_105273054_105273743_105275058_105278674_105278886_105280594_105280791_105282197
m54284U_201203_174622/158139894/ccs	chr7	+	3412	26	NNC	ENSMUSG00000066232.5	novel	4763	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	233.88532574747	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGTCTTGATCTGATT	7239	False	NA	21	True	ATTAAA	-16	NA	109617521	109655322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223_109654345_109655160
m54284U_201203_174622/158271379/ccs	chr9	+	4339	15	NIC	ENSMUSG00000032177.18	novel	3594	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_11	5.62429133857986	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGTTTCCTGGGATT	1164	False	NA	6	True	NA	NA	NA	21092911	21124544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21093117_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
m54284U_201203_174622/158335968/ccs	chr2	+	2383	9	NIC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	44.7960656754586	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTGTGTGTGCCACTGT	NA	False	NA	NA	False	TTTAAA	-26	NA	158466807	158481131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477946_158478068_158478587_158478721_158480552
m54284U_201203_174622/158402598/ccs	chr17	-	2107	4	NIC	ENSMUSG00000024213.15	novel	2223	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_3	149.962217463822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCTCTTTGTTCCAT	NA	False	NA	-23	True	AATAAA	-18	NA	27842469	27798360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_27799929_27800981_27801067_27802185_27802231_27842060
m54284U_201203_174622/158402662/ccs	chrX	-	4098	12	NIC	ENSMUSG00000037217.16	novel	3209	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_8	5.56405227203613	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTCTGTGCTTCTTGGT	NA	False	NA	-2	True	AATAAA	-17	NA	20787157	20726753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
m54284U_201203_174622/158467348/ccs	chr9	+	2020	16	NNC	ENSMUSG00000032586.10	novel	2706	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	111.282143920557	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGCTCTGGCTGTATA	NA	False	NA	13	True	AATAAA	-14	NA	107828165	107848724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_107828372_107833063_107833122_107833386_107833457_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
m54284U_201203_174622/158467372/ccs	chr6	+	4596	12	NIC	ENSMUSG00000071337.12	novel	3130	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_5	54.2339590482715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTAAACTTCTACA	9766	False	NA	22	True	AATAAA	-24	NA	86381285	86409167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
m54284U_201203_174622/158531680/ccs	chr15	-	240	1	Intergenic	novelGene_7907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAGAAGAAAGAGAGA	5883	False	NA	NA	False	NA	NA	NA	89410778	89410538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_89410500_89410800
m54284U_201203_174622/158532012/ccs	chr17	+	5862	15	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	94.6815554306936	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004421	29057518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29004515_29016706_29016813_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
m54284U_201203_174622/158533240/ccs	chr13	-	2483	13	NIC	ENSMUSG00000021665.10	novel	1905	14	NA	NA	0	-86	intron_retention	FALSE	canonical	3	2035	junction_5	132.195877394115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTCTATCCCTGAATC	NA	False	NA	-20	True	AATAAA	-19	NA	97334865	97312924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
m54284U_201203_174622/158534462/ccs	chr12	+	1528	11	NIC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_10	14.8811961884789	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGGGTCTCCAAAGAGTAA	8713	False	NA	7	True	AATAAA	-40	NA	79344124	79861152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_79344158_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860715
m54284U_201203_174622/158664157/ccs	chr5	-	3317	22	ISM	ENSMUSG00000029478.17	ENSMUST00000111398.8	8808	48	0	30649	0	0	5prime_fragment	FALSE	canonical	3	65	junction_19	15.2093478834087	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCAGGGTGTCTTAGT	NA	False	NA	NA	False	NA	NA	NA	125256283	125124865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
m54284U_201203_174622/158664281/ccs	chr18	+	5332	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	667	junction_5	85.8992869586238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737019	24771867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
m54284U_201203_174622/158728593/ccs	chr9	+	2641	12	NIC	ENSMUSG00000032411.16	novel	7354	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	115.371408864896	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201203_174622/158730806/ccs	chr11	-	2189	2	Genic_Genomic	ENSMUSG00000043439.6	novel	2314	1	NA	NA	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTTCGAGGTCCTTGC	4941	False	NA	-13	True	AATAAA	-21	NA	97520528	97518214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_-_97518492_97518616
m54284U_201203_174622/158793798/ccs	chr1	-	1449	10	NIC	ENSMUSG00000005674.10	novel	4712	10	NA	NA	0	-748	combination_of_known_junctions	FALSE	canonical	2	13	junction_9	36.8945778745768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGGTTTCTCCATT	9572	False	NA	92	True	AAAAAG	-13	NA	171050020	171046679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049623_171049943
m54284U_201203_174622/158793964/ccs	chr5	-	178	1	Intergenic	novelGene_3037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAAGGGGGGCTGGA	NA	False	NA	NA	False	NA	NA	NA	142842118	142841940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142841900_142842100
m54284U_201203_174622/158859746/ccs	chr9	+	6082	35	NIC	ENSMUSG00000037286.16	novel	4800	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	99.0800242787246	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100525652	100840597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_100525850_100545302_100545352_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
m54284U_201203_174622/158925441/ccs	chr3	+	2939	9	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_4	489.884106192475	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6111	False	NA	NA	False	AATAAA	-26	NA	88461070	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
m54284U_201203_174622/158927097/ccs	chr9	+	4528	24	NNC	ENSMUSG00000032409.16	novel	8056	47	NA	NA	0	-2784	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_23	22.001804359758	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGTGAATCTATAACATAC	NA	False	NA	NA	False	NA	NA	NA	95739707	95783307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95749546_95749739_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95783115
m54284U_201203_174622/158927645/ccs	chr5	+	4036	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4932	0	intron_retention	FALSE	canonical	0	0	junction_3	680.408158550603	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208607	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108247519_108247598_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201203_174622/158990908/ccs	chr4	+	3411	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	755	junction_6	70.225620361105	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGAAACTAGTCTCTT	9118	False	NA	33	True	TATAAA	-25	NA	152018195	152065684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
m54284U_201203_174622/158991507/ccs	chr11	-	2880	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_17	74.8992675331896	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671484	117656813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669623_117669758_117669875_117669988_117670118_117671361
m54284U_201203_174622/158991870/ccs	chr7	+	3876	6	NIC	ENSMUSG00000030753.16	novel	1123	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	94.1118483507789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGAGGTGTTTTTG	NA	False	NA	12	True	AATAAA	-19	NA	98352309	98367269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_98352686_98356203_98356325_98357143_98357239_98359332_98359441_98362065_98362161_98364188
m54284U_201203_174622/159056262/ccs	chr12	-	3926	17	NIC	ENSMUSG00000020954.17	novel	3046	18	NA	NA	0	1011	combination_of_known_splicesites	FALSE	canonical	3	58	junction_9	80.2484423524843	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGCTCTTGGCCACAT	NA	False	NA	-3	True	AATAAA	-19	NA	51738680	51655403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
m54284U_201203_174622/159058401/ccs	chr15	+	4612	21	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	0	-234	combination_of_known_splicesites	FALSE	canonical	1	46	junction_3	185.137489450408	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	68	False	NA	18	True	AATAAA	-18	NA	12117944	12185535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12118034_12118324_12118425_12135352_12135377_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
m54284U_201203_174622/159122054/ccs	chr16	-	2899	15	NIC	ENSMUSG00000012114.18	novel	3230	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	86.2078941884568	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540772	17469084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
m54284U_201203_174622/159123460/ccs	chr17	+	3363	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_11	388.210296585498	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923209	71966026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
m54284U_201203_174622/159187292/ccs	chr4	+	4044	11	NNC	ENSMUSG00000029068.17	novel	4220	11	NA	NA	0	56	intron_retention	FALSE	canonical	3	36	junction_7	322.213919624836	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGGCTGTCATTCTG	4637	False	NA	24	True	AATAAA	-29	NA	155896957	155908816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155902995_155904886_155905240_155905354_155905429_155905572_155906268_155906378_155906461_155906555_155907799
m54284U_201203_174622/159187823/ccs	chr17	+	2596	20	NNC	ENSMUSG00000024319.19	novel	3383	20	NA	NA	129	522	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_14	69.3361877031594	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTGTCCTCTCCTTTGTCC	NA	False	NA	19	True	NA	NA	NA	34175047	34185469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181536_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
m54284U_201203_174622/159187971/ccs	chr11	+	2081	12	NNC	ENSMUSG00000020840.11	novel	2497	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	205.538036133268	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCCGGCGTGTCTGGTC	NA	False	NA	30	True	AATAAA	-19	NA	76836564	76878205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_76836720_76837067_76837085_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
m54284U_201203_174622/159189488/ccs	chr11	+	4685	30	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	11	junction_25	28.6387977613865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295890	87446649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87375525_87375692_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
m54284U_201203_174622/159253897/ccs	chr11	-	2775	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	189.137222378063	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113456411
m54284U_201203_174622/15925450/ccs	chr6	-	3263	5	NIC	ENSMUSG00000004446.13	novel	2415	7	NA	NA	0	-265	intron_retention	FALSE	canonical	3	795	junction_4	65.9597415094996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGGAGAGCTGTATCT	NA	False	NA	-26	True	AATAAA	-16	NA	120893797	120870079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120878750_120893694
m54284U_201203_174622/15926066/ccs	chr10	-	1443	9	NNC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	58	0	intron_retention	FALSE	canonical	2	9	junction_1	190.906349750342	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186093	81181881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_81182296_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
m54284U_201203_174622/159320848/ccs	chr12	+	1526	14	NIC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	331.233913308169	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	False	NA	NA	False	ATTAAA	-42	NA	105976541	106041479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106041265
m54284U_201203_174622/159383803/ccs	chr17	-	5530	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_11	56.8017110217641	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851601	24815462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
m54284U_201203_174622/159386319/ccs	chr8	-	163	1	Intergenic	novelGene_4452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTCTTAACCACAGAGCC	NA	False	NA	NA	False	NA	NA	NA	106696192	106696029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106696000_106696200
m54284U_201203_174622/159449925/ccs	chrX	-	5043	29	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	19.2046909129313	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATCGCTGCTTTTTGGG	NA	False	NA	-4	True	AATAAA	-13	NA	12628312	12545987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
m54284U_201203_174622/159450282/ccs	chr18	-	3919	15	NIC	ENSMUSG00000041225.17	novel	4506	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	49.5805364214299	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTTTTTTTTTTGT	-23	True	NA	7	True	NA	NA	NA	6135970	6024426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6061846_6061973_6064340_6064422_6069830_6070092_6135803
m54284U_201203_174622/159451856/ccs	chr6	+	4837	25	NIC	ENSMUSG00000029804.18	novel	418	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	8.96743723454787	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATTGTAATTGTG	NA	False	NA	13	True	AATAAA	-21	NA	58808449	58897383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_58808628_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
m54284U_201203_174622/159515350/ccs	chr16	+	6008	30	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	-289	combination_of_known_junctions	FALSE	canonical	3	253	junction_5	68.2954691456644	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTATTGGAGAGTATC	NA	False	NA	12	True	ATTAAA	-23	NA	29398195	29473413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
m54284U_201203_174622/159516429/ccs	chr19	+	2850	12	NNC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	320.843155729575	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245643	7252590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_7246454_7247102_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
m54284U_201203_174622/159517295/ccs	chr4	+	4086	6	NNC	ENSMUSG00000058186.14	novel	4006	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	187.784344395373	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTTGGCTGTTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	145397254	145431011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_145397419_145399301_145399395_145406465_145406546_145422720_145422806_145425813_145425941_145427474
m54284U_201203_174622/159582131/ccs	chr9	+	7496	23	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_9	57.795396453694	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335334	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
m54284U_201203_174622/159646590/ccs	chr4	+	4212	15	NIC	ENSMUSG00000028869.14	novel	2366	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	650	junction_4	52.6940050030865	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAACTGTGTTCGCTTTCTT	NA	False	NA	28	True	ATTAAA	-22	NA	124923850	124949173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
m54284U_201203_174622/159648172/ccs	chr3	-	184	1	Intergenic	novelGene_1603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAAACAAAGTATTAG	NA	False	NA	NA	False	NA	NA	NA	103092081	103091897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_103091900_103092100
m54284U_201203_174622/159712168/ccs	chr15	+	3793	1	NIC	ENSMUSG00000015002.19	novel	1425	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGTCAGACTATTTT	NA	False	NA	NA	False	NA	NA	NA	65658890	65662683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_65658900_65662700
m54284U_201203_174622/159777547/ccs	chr11	-	1990	12	NIC	ENSMUSG00000035086.14	novel	4365	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	16	junction_5	136.608446915244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGGTACGCCTGTATG	NA	False	NA	-2	True	AATAAA	-25	NA	101193112	101179087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185860_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
m54284U_201203_174622/159779053/ccs	chrY	+	1021	2	ISM	ENSMUSG00000096768.9	ENSMUST00000179483.9	696	4	345	23028	172	-22979	internal_fragment	FALSE	canonical	3	607	junction_1	0	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGCCTGCGCCGACCGC	4297	False	NA	NA	False	NA	NA	NA	90796351	90804688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrY_+_90797249_90804564
m54284U_201203_174622/159842968/ccs	chr3	-	3555	25	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	0	563	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_18	110.969465269606	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACTTCTTGGTTTGGTT	NA	False	NA	NA	False	AATAAA	-39	NA	62414425	62377502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401760_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
m54284U_201203_174622/159843215/ccs	chr6	-	2880	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	57.4303586420109	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCGGAGTGTTACTTTAG	NA	False	NA	-2	True	AATAAA	-26	NA	146479278	146451129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456551_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
m54284U_201203_174622/159845190/ccs	chr7	+	1036	6	NNC	ENSMUSG00000054046.8	novel	718	3	NA	NA	-274	-772	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	15.8694675399019	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGCCTCTCTCACTG	NA	False	NA	16	True	AATAAA	-29	NA	43362548	43376186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43362686_43363215_43363307_43370390_43370581_43370691_43370961_43373178_43373316_43375974
m54284U_201203_174622/159908733/ccs	chr5	-	2780	14	NIC	ENSMUSG00000029427.12	novel	4350	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	111.512569939168	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGGTTTAATAAATTAG	6397	False	NA	-38	True	AATAAA	-20	NA	123859107	123837861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857589_123858785
m54284U_201203_174622/159909041/ccschrUn	chrUn_JH584304v1	-	2729	6	Intergenic	novelGene_9773	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	319.825327327277	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_58563_58836_59591
m54284U_201203_174622/159909948/ccs	chr4	-	3589	15	NIC	ENSMUSG00000029036.19	novel	2413	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	684	junction_4	51.7986683305307	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	False	NA	-9	True	AATAAA	-19	NA	155845550	155825097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_155825810_155830485_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
m54284U_201203_174622/15992256/ccs	chr15	+	2401	7	NNC	ENSMUSG00000023034.8	novel	893	2	NA	NA	1194	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	68.8486665730636	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGAGTCTTTTTTTCTGTTT	NA	False	NA	19	True	AATAAA	-21	NA	101165920	101172676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_101165971_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
m54284U_201203_174622/15992667/ccs	chr15	-	2772	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_9	210.521376586797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614102	81588453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
m54284U_201203_174622/159974052/ccs	chr2	-	4171	10	NIC	ENSMUSG00000026707.16	novel	3149	12	NA	NA	0	-475	intron_retention	FALSE	canonical	3	48	junction_2	8.45905169363301	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAAAGGTGAAGTCT	946	False	NA	-7	True	AATAAA	-19	NA	15054123	15000416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
m54284U_201203_174622/159974172/ccs	chr6	+	2323	13	NIC	ENSMUSG00000058440.15	novel	3584	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	167.068411636272	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	13	True	NA	NA	False	NA	NA	NA	30048027	30140903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_30048113_30088831_30088988_30089913_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
m54284U_201203_174622/159974263/ccs	chr5	+	5486	20	NIC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	795	junction_9	134.334060793221	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	766	False	NA	14	True	NA	NA	NA	75735614	75817382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775978_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
m54284U_201203_174622/159974759/ccs	chr17	+	7332	32	NNC	ENSMUSG00000068036.17	novel	5418	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	43	junction_28	89.1011304440633	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGTCCCTTGGTTGT	NA	False	NA	27	True	ATTAAA	-16	NA	13980800	14126057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029196_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116355_14116485_14119206_14119490_14122791_14122877_14124115
m54284U_201203_174622/160040135/ccs	chr7	+	3487	19	NIC	ENSMUSG00000039361.12	novel	3511	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_13	32.2637663220516	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTACGGTGTTCTGGTTTG	NA	False	NA	19	True	AATAAA	-20	NA	89779437	89858140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
m54284U_201203_174622/160040515/ccs	chr19	-	2420	5	NIC	ENSMUSG00000040451.19	novel	3262	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_4	81.1464725049709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGGCTATTATATTGT	8019	False	NA	-4	True	AATAAA	-15	NA	32188413	32100129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32188227
m54284U_201203_174622/160041614/ccs	chr8	+	3197	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_2	404.702050896706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8846	False	NA	39	True	AATAAA	-21	NA	120637571	120684299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_120637679_120658587_120658657_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
m54284U_201203_174622/160041812/ccs	chr15	-	2381	16	NIC	ENSMUSG00000023044.3	novel	2279	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	33.4241429708128	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGGTATGTTTTAAAG	6632	False	NA	NA	False	AATAAA	-17	NA	102112328	102085433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321_102097398_102112130
m54284U_201203_174622/160105751/ccs	chr18	+	2627	14	NNC	ENSMUSG00000037236.17	novel	1951	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	326.368488878054	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTAGGTCATGTTGAT	NA	False	NA	32	True	AATAAA	-8	NA	35695351	35724472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_35695361_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
m54284U_201203_174622/160107150/ccs	chr13	-	196	1	Intergenic	novelGene_7045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATATTCTAAAGAGACT	NA	False	NA	NA	False	NA	NA	NA	44810093	44809897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_44809900_44810100
m54284U_201203_174622/160172774/ccs	chr13	-	3279	1	Intergenic	novelGene_7019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	36420844	36417565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_36417600_36420800
m54284U_201203_174622/160301233/ccs	chr5	+	1268	9	NNC	ENSMUSG00000019179.11	novel	1456	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_8	1674.18614556447	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTAGATTTCCTTT	635	False	NA	38	True	AGTAAA	-25	NA	135807515	135819245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818936
m54284U_201203_174622/160301297/ccs	chr16	+	3668	11	NIC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	0	-1353	combination_of_known_splicesites	FALSE	canonical	2	32	junction_10	442.030541931211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTATCCATTTTTGA	NA	False	NA	29	True	AATAAA	-13	NA	56942065	56974895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56972945
m54284U_201203_174622/160301676/ccs	chr17	-	5527	41	NNC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_36	64.9732204450418	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851601	24815462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847080_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
m54284U_201203_174622/160302489/ccs	chr11	+	3974	17	NIC	ENSMUSG00000020705.7	novel	4011	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	125.961784259155	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTTTATCTTTTTATT	NA	False	NA	28	True	ATTAAA	-15	NA	106107751	106139965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
m54284U_201203_174622/160367548/ccs	chr19	+	2327	9	NIC	ENSMUSG00000024993.16	novel	2307	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	88.7623230881211	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACTACTTGATGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	60800048	60824665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_60800112_60803029_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
m54284U_201203_174622/160368112/ccs	chr14	-	3566	13	NIC	ENSMUSG00000037697.20	novel	9820	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_1	39.0799572102575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTAGTTCAATTATTTTTT	NA	False	NA	60	True	ATTAAA	-18	NA	45895600	45832178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_45833122_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
m54284U_201203_174622/160433762/ccs	chr12	+	4564	11	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1736	junction_1	198.727954752219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504630	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111504674_111504788_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
m54284U_201203_174622/160433916/ccs	chr11	+	1823	10	NNC	ENSMUSG00000034285.16	novel	1926	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	400.56981019481	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTGTGGTGTTGTCTTCA	NA	False	NA	11	True	ATTAAA	-11	NA	4823998	4844200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_4824104_4833422_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
m54284U_201203_174622/160434220/ccs	chr9	+	161	1	Intergenic	novelGene_5043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAATAAAACTTCAAA	NA	False	NA	NA	False	NA	NA	NA	102494017	102494178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102494000_102494200
m54284U_201203_174622/160434886/ccs	chr17	+	3168	12	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	121.487747231039	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332316	26342228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
m54284U_201203_174622/160499206/ccs	chr6	+	2679	15	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	41	junction_14	428.730762048317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808314	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849879_71851300
m54284U_201203_174622/160564988/ccs	chr19	-	7090	35	NIC	ENSMUSG00000054874.13	novel	7264	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_25	22.9138600567203	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTTATTTTCTG	NA	False	NA	-2	True	NA	NA	NA	5738723	5714662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731621_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
m54284U_201203_174622/160565223/ccs	chrX	+	4502	4	NIC	ENSMUSG00000047045.18	novel	5149	7	NA	NA	0	129	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.7073019704764	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTCAGGAGTCCTGGCC	NA	False	NA	1	True	ATTAAA	-10	NA	141464413	141621363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_141464553_141588985_141589065_141615496_141615598_141617180
m54284U_201203_174622/160565387/ccs	chr19	+	2609	13	NIC	ENSMUSG00000024949.18	novel	1000	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	380.114776160511	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	1469	False	NA	22	True	AATAAA	-22	NA	6414586	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414737_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
m54284U_201203_174622/16056898/ccs	chr2	+	160	1	Intergenic	novelGene_1005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	119325154	119325314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119325200_119325300
m54284U_201203_174622/16057396/ccs	chr1	-	4107	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	0	-638	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	112.85241099182	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8645	False	NA	-15	True	AATAAA	-23	NA	88205301	88190830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_88194381_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
m54284U_201203_174622/16058791/ccs	chr7	-	3045	10	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	75.3988571154828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8177	False	NA	-1	True	AATAAA	-28	NA	126074302	126066165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
m54284U_201203_174622/160694660/ccs	chr1	-	2399	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_5	70.4346505634833	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255522	121232081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247635_121255419
m54284U_201203_174622/160697006/ccs	chr18	-	4090	5	NIC	ENSMUSG00000038121.7	novel	9651	4	NA	NA	0	-5592	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	95.0299294959225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTTCTCCCTGACCT	NA	False	NA	-3	True	AATAAA	-15	NA	68433273	68398849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_68402024_68405633_68405746_68408832_68409346_68412337_68412500_68433144
m54284U_201203_174622/160760881/ccs	chr1	-	5562	22	NNC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_7	67.3110355751869	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778397	152712746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721257_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
m54284U_201203_174622/160826761/ccs	chr17	+	1906	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	35.076478942448	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	359	False	NA	17	True	AATAAA	-19	NA	28532545	28545546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
m54284U_201203_174622/160828027/ccs	chr1	+	4506	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_12	40.7907195049507	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201203_174622/160828234/ccs	chr9	+	3358	11	NNC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	277.400522710394	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1163	False	NA	64	True	NA	NA	NA	108394301	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_108394452_108405787_108406118_108407086_108407215_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201203_174622/160891570/ccs	chr11	+	2712	3	NNC	ENSMUSG00000020346.17	novel	3151	4	NA	NA	87	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	42.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	49141503	49153854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_49141634_49142376_49142502_49151397
m54284U_201203_174622/160891673/ccs	chr10	-	5009	32	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	8	junction_7	88.9675314039943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9208	False	NA	-2	True	ATTAAA	-14	NA	80578098	80542789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80545922_80546127_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
m54284U_201203_174622/160891964/ccs	chr8	-	3977	8	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	249	junction_5	11.2431384971149	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTGATTGACTTATT	NA	False	NA	-1	True	AATAAA	-26	NA	22675835	22658460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_22658991_22659728_22659964_22663277_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
m54284U_201203_174622/160893787/ccs	chr5	-	2464	10	NNC	ENSMUSG00000029312.13	novel	3193	10	NA	NA	0	-696	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	28.2991078688506	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCATCTATTCTTTTTC	NA	False	NA	-7	True	AATAAA	-14	NA	104059125	104010641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034154_104058981
m54284U_201203_174622/160956992/ccs	chr3	-	3438	6	NNC	ENSMUSG00000001017.16	novel	2972	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_2	638.877265208271	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416805	90406262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_90407415_90407687_90407822_90409422_90409561_90410402_90410590_90413414_90414934_90416497
m54284U_201203_174622/160957014/ccs	chr10	-	6677	13	NIC	ENSMUSG00000047146.18	novel	14369	13	NA	NA	88	275	combination_of_known_junctions	FALSE	canonical	3	63	junction_12	54.9749311555327	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTAACTGTGATTACATT	2891	False	NA	-83	True	ATTAAA	-18	NA	62723203	62648125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62722950
m54284U_201203_174622/160957452/ccs	chr5	-	179	1	Intergenic	novelGene_3076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCACTGCCACCACACCT	NA	False	NA	NA	False	NA	NA	NA	147270915	147270736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_147270700_147270900
m54284U_201203_174622/161022120/ccs	chr9	-	223	1	Intergenic	novelGene_4852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTATTTTATATATATAG	NA	False	NA	NA	False	AAGAAA	-29	NA	62990801	62990578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_62990600_62990800
m54284U_201203_174622/161024345/ccs	chr15	-	174	1	Intergenic	novelGene_7867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTTAAGGAACTGTT	957	False	NA	NA	False	NA	NA	NA	83032346	83032172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_83032200_83032300
m54284U_201203_174622/161153704/ccs	chr7	+	2953	14	NNC	ENSMUSG00000004056.16	novel	2865	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_12	137.812238272773	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27291170	27338878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336540_27336620_27337486
m54284U_201203_174622/161153852/ccs	chr2	+	1563	6	NNC	ENSMUSG00000017858.13	novel	2248	13	NA	NA	9590	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	144.162963343572	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGTCATTGATATCCT	NA	False	NA	19	True	ATTAAA	-31	NA	162873952	162888061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162874156_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
m54284U_201203_174622/161155620/ccs	chr15	+	2608	16	NIC	ENSMUSG00000033128.10	novel	3034	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	127.200873512025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGCTCTTGTCACCCT	NA	False	NA	18	True	AATAAA	-18	NA	78761750	78778785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
m54284U_201203_174622/161219197/ccs	chr10	-	169	1	Intergenic	novelGene_5615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	127972872	127972703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127972700_127972900
m54284U_201203_174622/16122690/ccs	chrX	-	6768	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	63	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_7	19.1554750278713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACTCTCTTTGGTGAAG	NA	False	NA	-3	True	AATAAA	-28	NA	12628249	12541607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
m54284U_201203_174622/16124482/ccs	chr3	-	374	3	NIC	ENSMUSG00000028062.16	novel	668	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_2	1306	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTCACCTGCTTTC	1108	False	NA	-6	True	AATAAA	-14	NA	88460200	88457125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_88457312_88458002_88458093_88460102
m54284U_201203_174622/161415186/ccs	chr4	+	3617	30	NIC	ENSMUSG00000053510.13	novel	4311	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	121.458350049186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGACGTGTGTGCAT	9940	False	NA	39	True	AATAAA	-31	NA	108857851	108918358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
m54284U_201203_174622/161415621/ccs	chr17	-	776	3	NNC	ENSMUSG00000040888.11	novel	1776	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_1	236	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGATTTCTGGATGTA	NA	False	NA	6	True	ATTAAA	-27	NA	24915130	24913158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_24913412_24914227_24914425_24914804
m54284U_201203_174622/161480746/ccs	chr10	+	1704	8	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_7	1321.06328541884	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGATTTCTTGG	846	False	NA	-1	True	TTTAAA	-22	NA	127894822	127912847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911937
m54284U_201203_174622/161547361/ccs	chr8	+	3945	15	NIC	ENSMUSG00000036712.16	novel	4476	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	14.0152977645347	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTATAAATATTGCTGT	NA	False	NA	8	True	TATAAA	-17	NA	89423687	89475083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
m54284U_201203_174622/161548562/ccs	chr9	-	4656	25	NNC	ENSMUSG00000036777.9	novel	4605	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_21	150.244522917365	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAGTTATTTAAGAAAT	7183	False	NA	-3	True	AATAAA	-20	NA	22300484	22243307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22260542_22260597_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287435_22287819_22291345_22291652_22293466_22293624_22300265
m54284U_201203_174622/161612249/ccs	chr13	+	4509	6	NNC	ENSMUSG00000021395.12	novel	4434	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	289.12599329704	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGGCTGTGAACTTT	NA	False	NA	NA	False	AATAAA	-13	NA	51254915	51306582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_51255102_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
m54284U_201203_174622/161612961/ccs	chr7	+	1324	1	NIC	ENSMUSG00000047751.10	novel	1227	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTGAATGAATTCGGAC	NA	False	NA	NA	False	AATAAA	-20	NA	139523701	139525025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_139523700_139525000
m54284U_201203_174622/161614354/ccs	chr9	+	3954	16	NIC	ENSMUSG00000032235.16	novel	4169	16	NA	NA	0	-50	combination_of_known_junctions	TRUE	canonical	3	18	junction_3	30.4426601261381	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAATGTGTTTGTCATTT	4669	False	NA	19	True	AATAAA	-13	NA	69305204	69340354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_69305336_69306227_69306370_69307758_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
m54284U_201203_174622/161614509/ccs	chr17	+	908	8	NIC	ENSMUSG00000094724.9	novel	1783	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	253.225961850483	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGGCTTTTTCTTGT	NA	False	NA	NA	False	AAAAAG	-11	NA	7246302	7265589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_7246498_7248506_7248568_7251537_7251591_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
m54284U_201203_174622/161743639/ccs	chr2	+	1197	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	360	-53	360	53	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGATTTATGCGAGATT	NA	False	NA	85	True	NA	NA	NA	167531194	167532391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_167531200_167532400
m54284U_201203_174622/161744522/ccs	chr8	+	4823	25	NIC	ENSMUSG00000031691.15	novel	4863	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_20	83.055035301232	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763543	85784212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
m54284U_201203_174622/161744800/ccs	chr1	-	6608	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	213	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_40	238.445264945647	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	8680	False	NA	17	True	NA	NA	NA	84816239	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816112
m54284U_201203_174622/161745568/ccs	chr16	+	5480	33	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	839	junction_14	252.911559316567	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/161876180/ccs	chr15	-	896	1	Antisense	novelGene_ENSMUSG00000022477.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-11	NA	81780017	81779121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_81779100_81780000
m54284U_201203_174622/16188306/ccs	chr19	+	5097	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	238	junction_7	79.6883723412051	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045019	46061240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
m54284U_201203_174622/16189735/ccs	chr15	+	7741	6	NNC	ENSMUSG00000001280.14	novel	7754	6	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	48.7138583977907	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGTTGGGAATGGG	NA	False	NA	30	True	AATAAA	-17	NA	102314683	102344839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_102314858_102316206_102316368_102316794_102318155_102334065_102334232_102338391_102338592_102339159
m54284U_201203_174622/161941365/ccs	chr2	+	4741	14	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	114	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	4.12238800214593	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGTCTTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	145517400	145729536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_145517505_145554374_145554499_145579302_145579375_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
m54284U_201203_174622/161942186/ccs	chr11	-	1984	14	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_12	140.170690535529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84017813_84017922_84020362
m54284U_201203_174622/162006008/ccs	chr12	+	2600	9	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-150	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	68.4715953881608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807468	117842441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_117807693_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
m54284U_201203_174622/162072740/ccs	chr1	+	178	1	Intergenic	novelGene_429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAAATTCCTTTTAAGATG	NA	False	NA	NA	False	NA	NA	NA	160750277	160750455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_160750300_160750500
m54284U_201203_174622/162136518/ccs	chr15	-	2253	3	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	3080	4730	0	3229	internal_fragment	FALSE	canonical	3	19	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGGTGGCCTGTGCCAT	8075	False	NA	NA	False	AATAAA	-21	NA	81578408	81575095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_81576508_81577187_81577355_81577734
m54284U_201203_174622/162137296/ccs	chr18	+	3008	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	92.9832057051696	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	969	False	NA	23	True	AATAAA	-28	NA	38429730	38450902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_38429852_38430552_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
m54284U_201203_174622/162268910/ccs	chr6	-	2589	17	NIC	ENSMUSG00000040250.15	novel	3059	18	NA	NA	328	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	24.9699819783675	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	False	NA	-11	True	AATAAA	-17	NA	146478950	146451138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
m54284U_201203_174622/162334091/ccs	chr13	-	2492	9	ISM	ENSMUSG00000021427.11	ENSMUST00000225246.2	1825	10	0	11592	0	-6796	5prime_fragment	FALSE	canonical	0	0	junction_1	427.585006168364	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAGCTGTATAATCTGT	5906	False	NA	-45	True	AATATA	-16	NA	38178133	38162172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_38163783_38167070_38167086_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
m54284U_201203_174622/162398278/ccs	chr14	-	2440	16	NIC	ENSMUSG00000023110.13	novel	2691	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_15	172.951425422156	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	4827	False	NA	-11	True	AATAAA	-25	NA	54754850	54744643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54754703
m54284U_201203_174622/162399127/ccs	chr16	+	4569	9	NIC	ENSMUSG00000008976.17	novel	4987	10	NA	NA	223	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	204.339446448795	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTTTTTGTTTTC	NA	False	NA	6	True	AATAAA	-15	NA	84632234	84660667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84653349_84653404_84653921_84654063_84654267_84654461_84657262
m54284U_201203_174622/162399458/ccs	chr5	+	4039	4	Intergenic	novelGene_2757	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	2.49443825784929	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGTGCCCAAAAAAGGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	110014577	110033378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110014679_110027935_110028063_110028252_110028314_110029628
m54284U_201203_174622/162400836/ccs	chr8	-	182	1	Intergenic	novelGene_4542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATGCTCAATTTGACA	NA	False	NA	NA	False	NA	NA	NA	120310138	120309956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_120310000_120310100
m54284U_201203_174622/162466612/ccs	chr6	-	159	1	Intergenic	novelGene_3322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAACAAAGA	NA	False	NA	NA	False	NA	NA	NA	71711503	71711344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_71711300_71711500
m54284U_201203_174622/162530406/ccs	chr9	+	4139	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	65.1808500241946	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATT	NA	False	NA	17	True	AATAAA	-20	NA	102595683	102610617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_102595730_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
m54284U_201203_174622/162530782/ccs	chr8	-	2624	3	NNC	ENSMUSG00000031803.9	novel	3055	3	NA	NA	-1743	-454	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	75.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTAATATTTCTGTTT	6778	False	NA	-3	True	NA	NA	NA	72156176	72143853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_72145800_72145960_72146544_72156081
m54284U_201203_174622/162531590/ccs	chr12	+	3675	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_3	100.949210277028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201203_174622/16255645/ccs	chr4	+	2918	10	NNC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	9	junction_3	76.6927491864634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156194631_156198345_156198459_156201152_156201306_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208580_156209873
m54284U_201203_174622/162596210/ccs	chr14	+	4406	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_40	204.990237572427	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
m54284U_201203_174622/162596808/ccs	chr11	-	3907	4	NIC	ENSMUSG00000020303.3	novel	3940	4	NA	NA	-88	99	intron_retention	FALSE	canonical	3	18	junction_3	61.8834029086601	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTGATTAGAAATGT	NA	False	NA	-14	True	AGTAAA	-27	NA	31320162	31307886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_31310529_31315331_31315544_31317725_31318328_31319711
m54284U_201203_174622/162597031/ccs	chr15	+	3376	21	NIC	ENSMUSG00000022364.15	novel	3311	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_20	64.8148131216931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAACTGTCTTCTTTGCT	NA	False	NA	14	True	AATAAA	-21	NA	57775634	57833463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199_57827321_57833119
m54284U_201203_174622/162597410/ccs	chr6	+	2836	7	NIC	ENSMUSG00000042213.18	novel	3087	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	5.31245915016974	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTTATTTGATTATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	116241182	116307263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_116241274_116250533_116250834_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
m54284U_201203_174622/162660698/ccs	chr2	-	1153	8	NIC	ENSMUSG00000070953.14	novel	2968	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	140.541227882404	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGACTTTTTACAAAAG	2795	False	NA	-22	True	AATAAA	-17	NA	34689766	34669228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687382_34687446_34689762
m54284U_201203_174622/162858034/ccs	chr1	-	7049	16	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	0	441	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_15	40.3277682111084	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTGTGTGTGATTTG	NA	False	NA	-3	True	GATAAA	-14	NA	30913002	30842185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067_30902245_30912658
m54284U_201203_174622/163054687/ccs	chr4	+	6917	12	NNC	ENSMUSG00000029009.18	novel	2104	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_1	27.4936506569477	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGTTTTTAAATGCTTA	NA	False	NA	17	True	ATTAAA	-21	NA	148123615	148144008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_148123867_148126043_148126287_148127881_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140089_148140140
m54284U_201203_174622/163054946/ccs	chr15	-	11417	6	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	11852	-2	4185	0	3prime_fragment	FALSE	canonical	3	17	junction_2	19.2665513260677	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGCCTTGTGCT	3508	False	NA	-7	True	AATAAA	-18	NA	76068058	76055173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722
m54284U_201203_174622/163055329/ccs	chr18	-	1399	1	Intergenic	novelGene_8867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34376315	34374916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34374900_34376300
m54284U_201203_174622/163055699/ccs	chr12	+	5029	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	32.7592485772635	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCACTGGACACTTTC	NA	False	NA	16	True	AATAAA	-25	NA	78795680	78887360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_78795720_78841018_78841108_78843876_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
m54284U_201203_174622/163056109/ccs	chr7	-	1036	6	NIC	ENSMUSG00000025499.19	novel	2828	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	225.486496269732	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTCTCTGGCTGGA	NA	False	NA	-6	True	AGTAAA	-14	NA	140773873	140770842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140771141_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
m54284U_201203_174622/163056241/ccs	chr16	+	5419	32	NNC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_2	399.57451876438	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20491627_20492617_20492712_20492981_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/163121428/ccs	chr1	-	6175	21	NIC	ENSMUSG00000042772.16	novel	3928	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	176	junction_5	38.5170092296897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGGTGTGTAGAGGATT	NA	False	NA	-4	True	ATTAAA	-18	NA	152778397	152712746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
m54284U_201203_174622/163121780/ccs	chrX	-	649	4	NNC	ENSMUSG00000015289.5	novel	761	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	667.988522855495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAGCCTCTAAATTTT	4493	False	NA	-19	True	AATAAA	-29	NA	73397224	73395767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_73396105_73396479_73396609_73396930_73397052_73397162
m54284U_201203_174622/163185178/ccs	chr3	-	800	7	NIC	ENSMUSG00000033752.8	novel	875	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	79.9112354775945	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTTCTCCTCTTTTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	84063093	83995239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_83995482_84000861_84000907_84012241_84012357_84041324_84041474_84045475_84045534_84049005_84049072_84062968
m54284U_201203_174622/163186534/ccs	chr11	+	2414	18	NNC	ENSMUSG00000034121.13	novel	2194	7	NA	NA	-5016	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	31.5170080957562	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTGGACTCTCGTTC	1440	False	NA	18	True	TATAAA	-20	NA	87739024	87754629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87739055_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
m54284U_201203_174622/16319942/ccs	chr8	-	1021	4	NIC	ENSMUSG00000074217.9	novel	1351	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	63.754738385995	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTGCAAGCTATTTTC	7520	False	NA	-9	True	AATAAA	-22	NA	84738800	84736850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84737122_84737339_84737402_84737769_84738400_84738742
m54284U_201203_174622/163252085/ccs	chr13	+	4253	10	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	88.1173460033078	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8653	False	NA	14	True	AATAAA	-20	NA	97208086	97266023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_97208220_97228325_97228461_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
m54284U_201203_174622/163252208/ccs	chr1	+	4188	26	NIC	ENSMUSG00000026615.15	novel	4906	32	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	605.755110915294	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTGGTTCATCCTGCA	NA	False	NA	22	True	AATAAA	-24	NA	185095254	185160557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_185095441_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
m54284U_201203_174622/163316326/ccs	chr1	-	6583	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-103	0	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_25	264.367769722511	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7784	False	NA	17	True	NA	NA	NA	84817135	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816949
m54284U_201203_174622/163316346/ccs	chr6	-	1138	7	NIC	ENSMUSG00000068250.14	novel	1369	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	33.0840680019183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTATTGTCCCATATT	NA	False	NA	-6	True	TATAAA	-24	NA	149090193	149059080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149089969
m54284U_201203_174622/163317138/ccs	chr5	-	8532	33	NIC	ENSMUSG00000055204.16	novel	8057	33	NA	NA	0	-168	combination_of_known_splicesites	TRUE	canonical	1	34	junction_19	34.2873741111433	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATATGTGTCCTGCCCTGT	NA	False	NA	-1	True	AATAAA	-19	NA	90514087	90375845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
m54284U_201203_174622/163317574/ccs	chr1	-	2434	6	NIC	ENSMUSG00000003721.15	novel	2697	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	72.0316597059932	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTCCTTTTTATTC	NA	False	NA	-1	True	ATTAAA	-17	NA	121255522	121232081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247357_121247702_121255419
m54284U_201203_174622/163381732/ccs	chr4	+	240	1	Intergenic	novelGene_1883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	381	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCTAGGGCCATGCAGTG	225	False	NA	NA	False	NA	NA	NA	59197787	59198027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_59197800_59198000
m54284U_201203_174622/163382013/ccs	chr2	-	1914	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	0	-762	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	29.521178838251	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTCCTTAAGACTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	73142911	73114210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
m54284U_201203_174622/163447748/ccs	chr5	+	2990	15	NIC	ENSMUSG00000028973.19	novel	2939	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	156	junction_3	17.6207206412895	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGTAGCTTAGTA	NA	False	NA	31	True	AATAAA	-21	NA	24599405	24614945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_24599582_24604910_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
m54284U_201203_174622/163512667/ccs	chr12	+	2674	13	NIC	ENSMUSG00000021277.17	novel	7060	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	15.2886577421157	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGGTCTCTGTTTTAAT	NA	False	NA	18	True	AATATA	-25	NA	111132803	111228994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111133037_111133432_111133542_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
m54284U_201203_174622/163578349/ccs	chr9	+	7777	27	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	480	junction_14	65.9353839153986	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	953	False	NA	14	True	AATAAA	-19	NA	103182413	103227627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
m54284U_201203_174622/163579280/ccs	chr2	+	8069	39	NIC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_17	32.341452179608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAATGTTTATGTTTTC	4326	False	NA	23	True	AATAAA	-37	NA	69727589	69854357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784708_69786310_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
m54284U_201203_174622/163643732/ccs	chr8	-	4216	27	NNC	ENSMUSG00000037993.9	novel	4463	27	NA	NA	244	0	at_least_one_novel_splicesite	TRUE	canonical	3	48	junction_24	18.695314731221	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCATTTTAAATCTCC	NA	False	NA	-2	True	AATAAA	-19	NA	110292249	110274642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075_110289416_110292122
m54284U_201203_174622/163644416/ccs	chr11	+	176	1	Intergenic	novelGene_6368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTCAACCCT	5459	False	NA	NA	False	NA	NA	NA	104301924	104302100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_104301900_104302100
m54284U_201203_174622/163709570/ccs	chr6	-	3820	11	NNC	ENSMUSG00000003153.11	novel	3959	10	NA	NA	200	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_10	3639.74799814493	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTATTTTTCCCCCTCTTG	1569	False	NA	-4	True	AATAAA	-29	NA	122778399	122704767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774760_122774839_122778246
m54284U_201203_174622/163710827/ccs	chr3	+	2044	12	NIC	ENSMUSG00000068917.13	novel	2128	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	172.621929599088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072123	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89072414_89074341_89074512_89076004_89076231_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
m54284U_201203_174622/163776835/ccs	chr1	-	177	1	Intergenic	novelGene_363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGAGAGAGATAGAT	8280	False	NA	0	True	NA	NA	NA	139486410	139486233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_139486200_139486400
m54284U_201203_174622/16384226/ccs	chr17	-	3687	21	NIC	ENSMUSG00000019214.15	novel	3214	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	468	junction_20	78.5125945310687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGGTCAGGCTCATAGG	5674	False	NA	-17	True	TATAAA	-18	NA	25946393	25938019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
m54284U_201203_174622/16385655/ccs	chrX	-	2739	5	ISM	ENSMUSG00000038344.15	ENSMUST00000041370.11	3862	10	61	9871	61	127	5prime_fragment	FALSE	canonical	3	191	junction_2	21.2132034355964	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTTGTTGGTTTTGT	NA	False	NA	-24	True	ATTAAA	-15	NA	161612389	161571785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594592_161612234
m54284U_201203_174622/16385836/ccs	chr5	+	4140	24	NIC	ENSMUSG00000005907.15	novel	4555	24	NA	NA	0	-129	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	17.7117222191902	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGACCTCATTTGTTTT	NA	False	NA	14	True	ATTAAA	-22	NA	3646198	3687101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_3646367_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
m54284U_201203_174622/163906468/ccs	chr5	+	6729	34	NIC	ENSMUSG00000034021.16	novel	7417	35	NA	NA	60	-267	combination_of_known_splicesites	FALSE	canonical	2	37	junction_28	30.7733501869126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAATTGCTACAGTTGTT	NA	False	NA	11	True	AATAAA	-18	NA	150597351	150733678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
m54284U_201203_174622/163971482/ccs	chr15	-	1324	11	NIC	ENSMUSG00000022247.13	novel	2664	10	NA	NA	0	-1402	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	951.468281131852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTACTTTATTCTTTTC	NA	False	NA	-11	True	AATAAA	-14	NA	10486033	10476266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485440_10485503_10485820
m54284U_201203_174622/163972034/ccs	chr4	+	4146	5	ISM	ENSMUSG00000038007.15	ENSMUST00000045224.14	4216	6	11631	0	11613	0	3prime_fragment	FALSE	canonical	2	7	junction_3	2.29128784747792	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAAATTATTTCTTTC	7697	False	NA	26	True	AATAAA	-17	NA	86804263	86839112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_86804510_86805260_86805403_86818718_86818857_86829852_86829991_86835630
m54284U_201203_174622/163972893/ccs	chr11	-	1664	1	Intergenic	novelGene_6424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGGACTGGAGGATGT	6744	False	NA	NA	False	NA	NA	NA	107464048	107462384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107462400_107464000
m54284U_201203_174622/164102834/ccs	chr2	+	3757	21	NIC	ENSMUSG00000026790.20	novel	3807	21	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	300.030898408814	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802577_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201203_174622/164103766/ccs	chr6	+	4187	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	101	junction_26	58.2477793996823	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185055	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233576_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201203_174622/164169845/ccs	chr2	+	4963	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_19	113.069326756027	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539253_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
m54284U_201203_174622/164233562/ccs	chr1	-	182	1	Intergenic	novelGene_228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCACAGAAATATAACAAGA	7792	False	NA	NA	False	NA	NA	NA	86340224	86340042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_86340000_86340200
m54284U_201203_174622/164234236/ccs	chr19	-	186	1	Intergenic	novelGene_9105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGCAGACTGCTCTTCCT	NA	False	NA	NA	False	NA	NA	NA	5783435	5783249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5783200_5783400
m54284U_201203_174622/164299653/ccs	chr1	+	3168	10	NNC	ENSMUSG00000073609.10	novel	3459	10	NA	NA	0	-308	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	13.0365109321456	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACCTTGTTCTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	93752961	93779762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_93753303_93754023_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
m54284U_201203_174622/164366598/ccs	chr8	-	4121	1	Genic_Genomic	ENSMUSG00000031949.18	novel	NA	NA	NA	NA	21446	2062	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTAGGCAGTGTTGGT	NA	False	NA	NA	False	TTTAAA	-32	NA	112695598	112691477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_-_112691500_112695600
m54284U_201203_174622/164430373/ccs	chr19	+	2400	11	NNC	ENSMUSG00000004054.10	novel	441	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	29.7471006990597	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738769	5752893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_5738802_5739504_5739541_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
m54284U_201203_174622/164431389/ccs	chr3	-	2500	19	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	11	junction_2	176.050576697594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662195	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95647632_95648339_95648428_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
m54284U_201203_174622/164496642/ccs	chr5	+	1602	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	182	junction_2	844.746612604142	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377872	38391650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_38377980_38380477_38380576_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
m54284U_201203_174622/164562934/ccs	chr15	+	1964	6	NIC	ENSMUSG00000022554.8	novel	1993	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	27.9184526791869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGACTCTCCTGCAAGAG	3544	False	NA	NA	False	NA	NA	NA	76253097	76255637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76253741_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
m54284U_201203_174622/164563307/ccs	chr5	-	4335	33	NIC	ENSMUSG00000060261.17	novel	4455	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_23	67.772417589588	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATTCTTTTCCTGCTGTC	621	False	NA	-3	True	AATAAA	-31	NA	134343614	134266687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
m54284U_201203_174622/164563571/ccs	chr17	-	2594	21	NNC	ENSMUSG00000052752.16	novel	2687	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	109.592552210449	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746842	24727823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735574_24737715_24737774_24738104_24738221_24746739
m54284U_201203_174622/164628632/ccs	chr11	-	2788	19	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	12	junction_6	76.5374918214661	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671484	117656813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
m54284U_201203_174622/164693215/ccs	chr7	+	5296	18	NNC	ENSMUSG00000038611.18	novel	5248	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	63.1683640324243	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTATGGACTGATGCT	NA	False	NA	81	True	NA	NA	NA	140808696	140842660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_140808805_140811139_140811256_140812334_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841200_140841456_140841688_140841818_140842321
m54284U_201203_174622/164694312/ccs	chr19	-	2125	18	NIC	ENSMUSG00000025188.16	novel	3196	18	NA	NA	0	-648	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	31.7861583333327	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACGTTTTATTTTTATT	NA	False	NA	NA	False	TTTAAA	-20	NA	42768404	42747566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_42747747_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
m54284U_201203_174622/164758275/ccs	chr15	+	3247	25	NIC	ENSMUSG00000023007.16	novel	3308	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	39.0095919472236	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTCCTCTTCATGT	NA	False	NA	44	True	TTTAAA	-25	NA	99192967	99214899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99193155_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
m54284U_201203_174622/164760056/ccs	chr13	-	6695	1	Intergenic	novelGene_7315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGAGCGTGGGGTCAGCCA	NA	False	NA	NA	False	AATAAA	-41	NA	114124682	114117987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_114118000_114124700
m54284U_201203_174622/164823702/ccs	chr2	+	264	1	Intergenic	novelGene_1190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTATACCACACCTAG	NA	False	NA	NA	False	NA	NA	NA	157222763	157223027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_157222800_157223000
m54284U_201203_174622/164824547/ccs	chr8	+	4868	16	NIC	ENSMUSG00000025812.19	novel	4682	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_15	30.4321467457614	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTTGTATGTATTGT	NA	False	NA	NA	False	AATAAA	-13	NA	127790642	128129058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128126878
m54284U_201203_174622/164824621/ccs	chr17	+	4935	21	NIC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	37.9476942646059	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCTAGGAATTGTAT	9439	False	NA	11	True	AATAAA	-18	NA	3165246	3249134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_3165694_3172327_3172390_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
m54284U_201203_174622/164824991/ccs	chr7	+	3044	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	324.491627513763	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944212	79966007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962957_79963274_79963317_79964861
m54284U_201203_174622/164891403/ccs	chr10	-	4033	10	NIC	ENSMUSG00000020063.17	novel	3905	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	95.9085212295782	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCATTGTTCATAGCA	NA	False	NA	0	True	ATTAAA	-26	NA	63174814	63154785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438_63162564_63167523_63167677_63171414_63171657_63172758_63172876_63174343
m54284U_201203_174622/164955398/ccs	chr18	+	4798	24	NIC	ENSMUSG00000034295.11	novel	4956	25	NA	NA	53	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	12.8794028205205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAGAAATGTTTATTCT	NA	False	NA	NA	False	AATAAA	-16	NA	24842554	25266558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
m54284U_201203_174622/164955531/ccs	chr13	-	4535	4	NNC	ENSMUSG00000048280.19	novel	652	4	NA	NA	0	3827	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	5.79271573232759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGTTATTTTATTTAT	NA	False	NA	-1	True	NA	NA	NA	67831635	67815558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_67819731_67821116_67821213_67821680_67821808_67831495
m54284U_201203_174622/164956727/ccs	chr4	+	1736	7	ISM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	1697	0	-881	0	3prime_fragment	FALSE	canonical	3	23	junction_2	4.10960933531265	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTCTTGGACCTGCT	NA	False	NA	12	True	AATAAA	-13	NA	155925879	155928545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
m54284U_201203_174622/165019769/ccs	chr5	-	3753	18	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	60.4775688348989	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211737	9168867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176803_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
m54284U_201203_174622/165021866/ccs	chr1	-	3096	14	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_13	55.8467895704439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6055	False	NA	NA	False	AATAAA	-18	NA	53336174	53228345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53329537_53329583_53336044
m54284U_201203_174622/165151243/ccs	chr4	-	4285	23	NIC	ENSMUSG00000028207.19	novel	6694	24	NA	NA	0	-2219	combination_of_known_splicesites	FALSE	canonical	0	0	junction_20	124.607715028517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTCACTTTAATTTTTC	4	True	NA	-13	True	AATAAA	-8	NA	9669086	9451297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
m54284U_201203_174622/165152004/ccs	chr9	-	2956	5	NIC	ENSMUSG00000032026.8	novel	1077	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1141	junction_3	30.1579177000004	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCGGCACCCTCTGCTC	NA	False	NA	-1	True	AATAAA	-26	NA	48391923	48379811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_48380247_48383119_48383174_48384331_48386498_48390609_48390694_48391706
m54284U_201203_174622/165152246/ccs	chr15	+	3646	1	NIC	ENSMUSG00000000346.10	novel	2135	4	NA	NA	282	-172	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCGATTGGCACATTGC	NA	False	NA	NA	False	NA	NA	NA	100513511	100517157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_100513500_100517200
m54284U_201203_174622/165153234/ccs	chr5	+	4046	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.5151447085683	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	893	False	NA	4	True	TTTAAA	-7	NA	121849922	121953013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
m54284U_201203_174622/16515641/ccs	chr8	-	1166	6	NIC	ENSMUSG00000031819.14	novel	1863	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	592.891355983539	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGTACACGGTGTACC	NA	False	NA	-22	True	ATTAAA	-29	NA	121394826	121384571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_121384988_121385266_121385362_121385743_121385814_121387232_121387410_121387522_121387600_121394495
m54284U_201203_174622/16517171/ccs	chr11	-	1750	10	NNC	ENSMUSG00000017132.18	novel	545	6	NA	NA	0	3868	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	11.5256022043466	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTGTCCGAGTTTAGG	8600	False	NA	NA	False	AATAAA	-21	NA	118139418	118071929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_118072737_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
m54284U_201203_174622/165216876/ccs	chr15	-	3849	8	NIC	ENSMUSG00000022451.13	novel	3025	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	499	junction_7	17.1357127969987	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	False	NA	-12	True	AATAAA	-12	NA	94487770	94475831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94484418_94486108_94486187_94487632
m54284U_201203_174622/165218224/ccs	chr10	-	4971	20	NIC	ENSMUSG00000020115.4	novel	3005	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	107	junction_11	18.1066400945196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGGCTTGTGTGCTTTT	3888	False	NA	-5	True	AATAAA	-17	NA	121422682	121382364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
m54284U_201203_174622/165282652/ccs	chr11	+	4649	20	NIC	ENSMUSG00000009090.18	novel	4085	21	NA	NA	0	-150	intron_retention	FALSE	canonical	3	239	junction_6	28.2306487542506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCACATTTCTTCCCTC	NA	False	NA	20	True	AATAAA	-20	NA	4936911	4992579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
m54284U_201203_174622/165284454/ccs	chr16	+	5123	15	NIC	ENSMUSG00000022905.13	novel	5039	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	163.253402627289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACAGGTTTTCCTTGGG	NA	False	NA	26	True	AATAAA	-39	NA	35803723	35857501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35836256_35836380_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
m54284U_201203_174622/165414658/ccs	chr13	-	5655	28	NIC	ENSMUSG00000035248.10	novel	5869	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.0229256012057	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTTTATCCACATTATT	NA	False	NA	-8	True	AATAAA	-17	NA	59970961	59919693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970789
m54284U_201203_174622/165546547/ccs	chr3	+	1977	4	NIC	ENSMUSG00000037661.15	novel	2213	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	82	junction_1	76.6130247122221	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTATTTGTTTTTTGT	NA	False	NA	34	True	AATAAA	-19	NA	30910098	30951341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_30910395_30931383_30931482_30944090_30944191_30949858
m54284U_201203_174622/165610299/ccs	chr6	-	177	1	Intergenic	novelGene_3480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACCTGAACTCTCTATG	8568	False	NA	NA	False	NA	NA	NA	122649212	122649035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122649000_122649200
m54284U_201203_174622/165610746/ccs	chr6	+	176	1	Intergenic	novelGene_3565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAAGAAGGC	NA	False	NA	NA	False	NA	NA	NA	140392704	140392880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_140392700_140392900
m54284U_201203_174622/165611640/ccs	chr11	+	2727	10	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	70	0	intron_retention	FALSE	canonical	3	1074	junction_8	51.6729984172788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1705	False	NA	18	True	ATTAAA	-15	NA	78403088	78413562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409806_78410005_78410132_78411977_78412058_78412619
m54284U_201203_174622/165742415/ccs	chr1	-	4452	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_15	52.7071303326381	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168743	38091876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
m54284U_201203_174622/16580630/ccs	chr16	+	4652	25	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.3319772338318	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482726	31692167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
m54284U_201203_174622/16581459/ccs	chr2	-	5308	8	NNC	ENSMUSG00000026860.17	novel	1823	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	45	junction_6	107.782850477907	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249317	30234822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30240393_30240595_30240730_30244864_30244994_30245294_30245415_30249154
m54284U_201203_174622/16582644/ccs	chr11	+	2668	17	NNC	ENSMUSG00000039908.15	novel	2695	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	13.6358901432946	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATGTGTGTGTGGTGT	NA	False	NA	NA	False	ATTAAA	-24	NA	119246413	119271905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_119246466_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
m54284U_201203_174622/165872131/ccs	chr3	+	2269	16	NNC	ENSMUSG00000028256.17	novel	913	7	NA	NA	-103	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	26.9686237443935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGTATAAGTTTTAAAG	NA	False	NA	NA	False	AATAAA	-23	NA	144824631	144859656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_144824690_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
m54284U_201203_174622/165872159/ccs	chr11	+	4888	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	intron_retention	FALSE	canonical	3	2354	junction_10	206.546112978166	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332202	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
m54284U_201203_174622/165872975/ccs	chr5	-	187	1	Antisense	novelGene_ENSMUSG00000097877.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTTTAAAAATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	104267184	104266997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_104267000_104267200
m54284U_201203_174622/165874168/ccs	chr2	+	4017	6	NIC	ENSMUSG00000037514.19	novel	4266	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	205.341082104873	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCTTGCATGTA	864	False	NA	5	True	AATAAA	-19	NA	131104414	131141108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_131104736_131115830_131116184_131124511_131124689_131129393_131129518_131135318_131135445_131138192
m54284U_201203_174622/165937252/ccs	chr11	-	3728	12	NIC	ENSMUSG00000033352.12	novel	3695	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	82.1603954379018	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTTCTGGTTCTTTTCT	NA	False	NA	-1	True	ATTAAA	-42	NA	65679123	65579068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
m54284U_201203_174622/165938660/ccs	chr7	-	3087	4	NIC	ENSMUSG00000025494.9	novel	1897	9	NA	NA	-127	0	intron_retention	FALSE	canonical	3	90	junction_3	28.8598144292178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	False	NA	-30	True	AATAAA	-17	NA	140676779	140671087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140672219_140672293_140673839_140674694_140674859_140676532
m54284U_201203_174622/165938975/ccs	chr7	+	4185	30	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_29	54.1250808382137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285668	35338651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438_35337710_35337808
m54284U_201203_174622/166004117/ccs	chr8	+	953	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	204.767398528184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATTTGAAGTCAAT	NA	False	NA	2	True	AATAAA	-20	NA	80438448	80501971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_80438604_80439733_80439909_80446286_80446378_80455758_80455880_80501560
m54284U_201203_174622/166068294/ccs	chr18	-	2395	22	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	-28996	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_21	43.4022999066663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTGGGCTGTCCCAG	NA	False	NA	38	True	NA	NA	NA	34054023	33929969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34053910
m54284U_201203_174622/166069275/ccs	chr7	-	2036	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	100	junction_1	39.1955354600495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACTGTGTCCTTGAACC	NA	False	NA	-1	True	AATAAA	-27	NA	16020705	16009388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
m54284U_201203_174622/166135865/ccs	chr11	+	1753	5	NNC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	1695	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	11.8400802362146	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTGCTTCCTGGTTTA	NA	False	NA	14	True	AATAAA	-31	NA	100771539	100775995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_100771644_100771855_100772012_100772563_100772616_100772887_100772993_100774659
m54284U_201203_174622/166136274/ccs	chr5	-	1628	17	NIC	ENSMUSG00000025533.16	novel	2413	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_16	77.2141654345237	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	False	NA	-10	True	AATAAA	-21	NA	130053186	130040344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053048
m54284U_201203_174622/166202138/ccs	chr9	-	2404	18	NNC	ENSMUSG00000032498.10	novel	2754	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	123.441565403247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTTTTTTTTTTTATA	NA	False	NA	-27	True	AATAAA	-15	NA	111100614	111057322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111068786_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
m54284U_201203_174622/166265072/ccs	chr2	-	2644	11	NIC	ENSMUSG00000006471.19	novel	2336	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	170	junction_5	16.1124175715502	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTAGCCGCTCACTTCTC	NA	False	NA	-6	True	CATAAA	-16	NA	25145421	25137240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25137867_25137971_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
m54284U_201203_174622/166265977/ccs	chr7	-	3540	26	NIC	ENSMUSG00000038644.15	novel	3454	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	875	junction_25	149.475648852915	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTGTGTTGTGGTCT	NA	False	NA	-5	True	AATAAA	-18	NA	44198273	44182172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
m54284U_201203_174622/166330929/ccs	chr4	-	2219	20	NNC	ENSMUSG00000040044.12	novel	3089	14	NA	NA	0	3578	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	162.441193280024	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTGCTTTGTGTGGGGT	-5	True	NA	NA	False	NA	NA	NA	34614913	34567217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_34567391_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
m54284U_201203_174622/166330984/ccs	chr5	+	2853	16	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_9	109.607096282839	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGGTAGTTTTCAATC	395	False	NA	15	True	AATAAA	-18	NA	67464306	67513129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
m54284U_201203_174622/166332730/ccs	chr5	+	3703	16	NIC	ENSMUSG00000029165.18	novel	3579	16	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_1	6.71118469422501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTAGTTGCTTTGTATG	NA	False	NA	11	True	AATAAA	-19	NA	31046299	31064011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31046869_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
m54284U_201203_174622/166462050/ccs	chr10	+	2372	14	ISM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	115	2950	-89	-1917	5prime_fragment	FALSE	canonical	3	69	junction_7	9.81666256450355	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTATATGGATTCTTCCT	NA	False	NA	17	True	AATAAA	-26	NA	82534955	82575312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813
m54284U_201203_174622/166464080/ccs	chr11	-	1406	11	NIC	ENSMUSG00000018677.10	novel	1564	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_1	1393.56754052324	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7726	False	NA	95	True	NA	NA	NA	102298332	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102294362_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
m54284U_201203_174622/16647504/ccs	chr4	+	5100	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	153.602115870843	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/16648093/ccs	chr1	-	2310	6	NNC	ENSMUSG00000004451.15	novel	2289	5	NA	NA	170	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	504.701495935964	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGCCCTTTTTCCTGCAT	NA	False	NA	-4	True	AATAAA	-21	NA	119432354	119398034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119430561_119430753_119432306
m54284U_201203_174622/166529574/ccs	chr14	-	1426	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	0	-111	at_least_one_novel_splicesite	FALSE	canonical	2	77	junction_8	1052.17462310208	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746205	63729906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737762_63746158
m54284U_201203_174622/166593045/ccs	chr1	+	4099	19	NIC	ENSMUSG00000033257.15	novel	10019	20	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	34.5028179203445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGCCATGTGTGATTTAT	NA	False	NA	10	True	TATAAA	-22	NA	74700903	74737136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_74701049_74718056_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726362_74726555_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
m54284U_201203_174622/166593247/ccs	chr11	+	188	1	Intergenic	novelGene_6031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTATCTGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	76272795	76272983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76272800_76273000
m54284U_201203_174622/166594873/ccs	chr10	+	847	10	NIC	ENSMUSG00000078427.4	novel	918	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	355	junction_8	1412.89957529774	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657776	128713498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128708289_128708380_128713201
m54284U_201203_174622/166595038/ccs	chr16	-	3979	19	NNC	ENSMUSG00000022789.16	novel	3951	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	34	junction_18	341.776387079962	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTTTCTGATGTGCTTC	NA	False	NA	-7	True	AATAAA	-29	NA	16176823	16130093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164005_16176627
m54284U_201203_174622/166660659/ccs	chr4	+	5009	26	NNC	ENSMUSG00000042489.16	novel	5027	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	15	junction_25	24.64	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTCCAGCTCTAGTG	NA	False	NA	30	True	AATAAA	-23	NA	126450787	126487696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486832
m54284U_201203_174622/166724422/ccs	chr4	-	1983	5	NIC	ENSMUSG00000042558.17	novel	1672	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	286	junction_2	42.9418211071678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGCATGTCCTGTTCCT	7076	False	NA	NA	False	AATAAA	-15	NA	126215496	126209844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126210659_126211095_126211698_126211776_126211985_126212191_126212289_126215234
m54284U_201203_174622/166724444/ccs	chr2	+	3679	13	NIC	ENSMUSG00000026648.19	novel	2469	14	NA	NA	0	1266	intron_retention	FALSE	canonical	0	0	junction_4	9.10547759440559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTATGATGACATTTTA	1021	False	NA	15	True	AATAAA	-26	NA	3425186	3456395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_3425364_3426400_3426453_3430304_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884
m54284U_201203_174622/166725288/ccs	chr18	+	2510	6	NIC	ENSMUSG00000060450.15	novel	3040	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	90.4486594704421	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	969	False	NA	23	True	AATAAA	-28	NA	38429730	38450902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_38429852_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
m54284U_201203_174622/166789191/ccs	chr3	+	2566	20	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	74	junction_19	373.246081183867	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGTAAAGGATTCAT	NA	False	NA	43	True	AATAAA	-33	NA	151916118	151938426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
m54284U_201203_174622/166789738/ccs	chr3	+	3422	21	NNC	ENSMUSG00000068747.15	novel	6836	21	NA	NA	0	-3397	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_17	14.2123186004255	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTTCAGGCTGTACTT	4989	False	NA	NA	False	ATTAAA	-21	NA	108191406	108265357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_108191757_108215792_108215853_108217459_108217534_108231911_108232015_108232964_108233130_108235323_108235398_108239226_108239277_108241884_108242013_108245106_108245252_108246126_108246283_108247914_108248022_108252169_108252273_108253029_108253199_108253972_108254164_108255883_108256074_108258987_108259105_108261448_108261558_108262787_108262887_108263546_108263654_108263892_108264005_108264544
m54284U_201203_174622/166791417/ccs	chr4	-	191	1	Intergenic	novelGene_2387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGTCTCTTTCTGAATC	NA	False	NA	NA	False	NA	NA	NA	149595086	149594895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_149594900_149595100
m54284U_201203_174622/166855639/ccs	chr9	+	5187	17	NNC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_15	49.7895179103996	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTGTCTTTTTTTAGT	NA	False	NA	11	True	AATAAA	-19	NA	121126599	121303984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289581_121298050_121298154_121301302
m54284U_201203_174622/166857004/ccs	chr19	-	1272	10	NIC	ENSMUSG00000036748.17	novel	1941	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_9	344.205723727706	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTCATTCTGCTCATTT	5822	False	NA	-2	True	AGTAAA	-19	NA	46327099	46318978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46326958
m54284U_201203_174622/166920520/ccs	chr2	+	2798	1	Antisense	novelGene_ENSMUSG00000078870.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAACAGATCACACAGAA	NA	False	NA	NA	False	NA	NA	NA	176891877	176894675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_176891900_176894700
m54284U_201203_174622/166921029/ccs	chr11	-	2613	15	NNC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	1642	intron_retention	FALSE	canonical	1	23	junction_1	264.788286626682	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACGAGAGGTTAAAGCCC	NA	False	NA	-2	True	CATAAA	-20	NA	120687229	120678384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120679432_120680302_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
m54284U_201203_174622/166921414/ccs	chr14	+	4415	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	329	junction_36	142.740216389776	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201203_174622/166922538/ccs	chr1	+	261	1	Intergenic	novelGene_468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAACCTCCCTATTTTGCC	NA	False	NA	NA	False	NA	NA	NA	170914949	170915210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_170914900_170915200
m54284U_201203_174622/166922788/ccs	chr8	+	3016	7	NIC	ENSMUSG00000091490.4	novel	1552	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	424	junction_1	48.9810053887105	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTCTCTGCATGT	NA	False	NA	21	True	AATAAA	-12	NA	43633577	43646918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_43633650_43636158_43636403_43636739_43638496_43640607_43640749_43643105_43643129_43643305_43643407_43646239
m54284U_201203_174622/166987096/ccs	chr1	-	181	1	Intergenic	novelGene_343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATATTTATATTTTGTA	1687	False	NA	NA	False	NA	NA	NA	135632358	135632177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_135632200_135632400
m54284U_201203_174622/166987795/ccs	chr7	-	4470	23	NIC	ENSMUSG00000000131.16	novel	4455	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_18	147.17889828088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGATGGGGCATCTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	125799673	125700887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
m54284U_201203_174622/166987917/ccs	chr19	+	3979	10	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	163.616383616233	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	3925	False	NA	21	True	TATAAA	-24	NA	53933303	54021562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_53933327_53938249_53938375_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
m54284U_201203_174622/166988057/ccs	chr18	-	4694	16	NIC	ENSMUSG00000057440.9	novel	4981	17	NA	NA	0	-147	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	26.6329787210435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCTTGAAAGTTGTTT	-15	True	NA	NA	False	AATAAA	-17	NA	7626859	7348110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_7351145_7353153_7353298_7355017_7355127_7356141_7356236_7379988_7380070_7403185_7403357_7439568_7439634_7440082_7440280_7440431_7440507_7441552_7441639_7442792_7442875_7458931_7459013_7461637_7461716_7512943_7513063_7561725_7561873_7626728
m54284U_201203_174622/167052124/ccs	chr7	+	3590	23	NNC	ENSMUSG00000033790.12	novel	3905	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_13	20.6189353718316	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTCTACCTATTTCATG	NA	False	NA	15	True	AATAAA	-18	NA	55443938	55481194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466252_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
m54284U_201203_174622/167116896/ccs	chr11	+	7609	8	NIC	ENSMUSG00000020300.15	novel	6303	9	NA	NA	-1315	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	6.8332918532008	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTACTATACTTAT	NA	False	NA	3	True	AATAAA	-14	NA	31820895	31885634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_31823413_31839857_31839940_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
m54284U_201203_174622/16712998/ccs	chr1	-	5566	26	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	0	-1852	combination_of_known_junctions	FALSE	canonical	2	23	junction_22	403.995295022108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTGTGTTTTTTGA	NA	False	NA	-2	True	AATAAA	-20	NA	55066553	55026183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55055342_55055534_55055650_55055937_55056043_55058392_55058560_55066497
m54284U_201203_174622/16713485/ccs	chr11	+	2373	11	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1019	junction_3	100.383066301045	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGCACGGTGTCAG	NA	False	NA	16	True	AATAAA	-14	NA	98573416	98586805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
m54284U_201203_174622/16713982/ccs	chr4	-	3407	17	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	77.5763484816732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119156	72036043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
m54284U_201203_174622/16714026/ccs	chr7	-	1053	3	NIC	ENSMUSG00000030717.10	novel	829	3	NA	NA	149	0	intron_retention	FALSE	canonical	3	40	junction_2	1854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGGCGTGTGTTGTGT	NA	False	NA	-8	True	AATAAA	-16	NA	126225039	126222420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126222752_126224061_126224585_126224840
m54284U_201203_174622/16714248/ccs	chr12	+	1429	8	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_5	81.9245546406035	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28699622	28709588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707635_28707717_28708169_28708295_28708991
m54284U_201203_174622/167182567/ccs	chr9	+	2138	4	ISM	ENSMUSG00000032500.11	ENSMUST00000111879.5	3005	5	28992	0	28992	0	3prime_fragment	FALSE	canonical	3	22	junction_1	4.96655480858378	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCTTGTTCAATGGT	7238	False	NA	NA	False	AATAAA	-20	NA	111297140	111318186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_111298384_111311685_111311819_111313984_111314153_111317592
m54284U_201203_174622/167183284/ccs	chr17	+	4597	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16073	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_15	12.1088810383123	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	2020	False	NA	20	True	AATAAA	-25	NA	47507239	47670388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664622_47664871_47669834
m54284U_201203_174622/167249272/ccs	chr1	-	206	1	Intergenic	novelGene_398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAATCTAGCAAATGAA	NA	False	NA	NA	False	NA	NA	NA	155445971	155445765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_155445800_155446000
m54284U_201203_174622/167249409/ccs	chr2	+	2175	12	NIC	ENSMUSG00000023393.16	novel	2275	13	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	57	junction_3	52.1550453966879	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTGTTTTATTCAATA	NA	False	NA	29	True	ATTAAA	-14	NA	180367055	180384073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_180367245_180373672_180373871_180374225_180374366_180377635_180377767_180378479_180378577_180378799_180378897_180379384_180379473_180380201_180380237_180381611_180381728_180382318_180382375_180382505_180382536_180383075
m54284U_201203_174622/167313866/ccs	chr14	+	4250	39	NNC	ENSMUSG00000021843.18	novel	4298	40	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	161.23728020007	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201203_174622/167314428/ccs	chr11	-	242	1	Intergenic	novelGene_5897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGCCTCCTTAAGATT	NA	False	NA	NA	False	AAAAAG	-7	NA	61394127	61393885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_61393900_61394100
m54284U_201203_174622/167315462/ccs	chr9	+	2909	12	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	0	117	intron_retention	FALSE	canonical	3	657	junction_6	45.9782557302906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184490	46192899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
m54284U_201203_174622/167380125/ccs	chr15	+	185	1	Intergenic	novelGene_7711	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAACAAATATTTCTTAAC	NA	False	NA	NA	False	NA	NA	NA	51749489	51749674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_51749500_51749700
m54284U_201203_174622/167446953/ccs	chr10	+	1033	5	NIC	ENSMUSG00000035242.16	novel	1044	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	233	junction_1	2913.0790733346	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	False	NA	13	True	AATAAA	-13	NA	80662519	80665118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80662740_80664076_80664217_80664294_80664468_80664544_80664631_80664704
m54284U_201203_174622/167447010/ccs	chr2	+	4907	14	NIC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	224	junction_10	37.2830211844353	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942946	128968514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128961117_128964989_128965187_128965630_128965885_128967133
m54284U_201203_174622/167447099/ccs	chr18	-	3040	3	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	0	-83777	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	38.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGATTTTTGGAGATT	NA	False	NA	NA	False	AATAAA	-12	NA	34140019	34135623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_34138028_34139037_34139476_34139821
m54284U_201203_174622/167511952/ccs	chr11	+	2343	13	NIC	ENSMUSG00000007739.11	novel	2484	14	NA	NA	0	188	intron_retention	FALSE	canonical	3	4673	junction_2	347.321446933529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGTCATTTTAAAAT	NA	False	NA	22	True	ATTAAA	-22	NA	22940625	22953339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
m54284U_201203_174622/167575791/ccs	chr2	+	3378	30	NNC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	138	junction_28	188.592262877146	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854968	146919920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916807_146916947_146919402
m54284U_201203_174622/167576142/ccs	chr11	-	2429	10	NIC	ENSMUSG00000005204.13	novel	2313	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	762	junction_9	86.3109509095664	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTGGTGGTCTTCCTT	8530	False	NA	-5	True	AATAAA	-17	NA	69572672	69563940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
m54284U_201203_174622/167576853/ccs	chr3	-	3033	23	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	39.5830542254913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257303	89246950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248420_89248558_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
m54284U_201203_174622/167577225/ccs	chr1	+	1452	8	NIC	ENSMUSG00000026201.13	novel	1500	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	57.8389742195996	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTAGGTCAATGTGT	NA	False	NA	9	True	AATAAA	-17	NA	75187513	75190886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75187669_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
m54284U_201203_174622/167577727/ccs	chr2	-	6060	1	NIC	ENSMUSG00000027566.16	novel	914	7	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGATGAGAACCTGTC	NA	False	NA	-12	True	AATAAA	-17	NA	179684226	179678166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_179678200_179684200
m54284U_201203_174622/167577940/ccs	chr14	-	184	1	Intergenic	novelGene_7331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTCTATGGTTGGGGGGT	NA	False	NA	NA	False	NA	NA	NA	8428314	8428130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_8428100_8428300
m54284U_201203_174622/167578204/ccs	chr4	+	5264	22	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	157.712359086461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390706_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/167642302/ccs	chr7	-	4990	27	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	44.9229616700313	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107466	144030494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_144031727_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
m54284U_201203_174622/167643061/ccs	chr4	-	189	1	Intergenic	novelGene_1889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTCTTTCCATTGATT	NA	False	NA	NA	False	NA	NA	NA	59797450	59797261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_59797300_59797400
m54284U_201203_174622/167905232/ccs	chr6	-	5368	6	Fusion	ENSMUSG00000039841.15_ENSMUSG00000106990.2	novel	703	5	NA	NA	0	-1481	multi-exon	FALSE	canonical	3	14	junction_1	14.5958898324152	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGGTTTCTGGATTTGTTA	-6	True	NA	NA	False	ATTAAA	-15	NA	28261931	28212487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr6_-_28215645_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261766
m54284U_201203_174622/167906086/ccs	chr11	+	1783	8	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_7	184.02828087896	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541716
m54284U_201203_174622/167971416/ccs	chr14	+	2402	14	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	749	junction_2	38.1001483169705	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052885_51053653_51053757_51054429_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
m54284U_201203_174622/168035023/ccs	chr2	+	4186	7	NIC	ENSMUSG00000000826.17	novel	3728	6	NA	NA	0	629	combination_of_known_junctions	FALSE	canonical	3	29	junction_6	78.8044344493943	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAACAGCTGTGGTTTCT	7071	False	NA	8	True	AATAAA	-9	NA	181162343	181194671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181190718_181190794_181191065_181191814_181191959
m54284U_201203_174622/168035619/ccs	chr17	+	3955	26	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	97.0906051067764	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGATTGTTTCAGG	7172	False	NA	20	True	AATAAA	-21	NA	35117946	35133028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
m54284U_201203_174622/168035706/ccs	chr11	+	4065	15	NIC	ENSMUSG00000020770.14	novel	3735	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_12	15.2015372477219	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGCTTGTTTATATGGGA	8823	False	NA	19	True	AATAAA	-13	NA	115921148	115952040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
m54284U_201203_174622/168036198/ccs	chr8	+	4458	19	NNC	ENSMUSG00000017478.16	novel	4789	8	NA	NA	231	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	91.0922236520579	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	1208	False	NA	15	True	AATAAA	-16	NA	123103650	123144099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_123104490_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
m54284U_201203_174622/168100938/ccs	chr4	+	3676	18	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.2438244298896	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTAGCATCTGCTTC	378	False	NA	14	True	TTTAAA	-18	NA	140966890	140984875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_140967182_140967942_140968056_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
m54284U_201203_174622/168165639/ccs	chr8	+	4482	38	NIC	ENSMUSG00000050357.10	novel	4194	39	NA	NA	-325	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_36	9.80481538199191	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAACAGCGTGGAATA	NA	False	NA	NA	False	ATTAAA	-7	NA	106412580	106424819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106412946_106413191_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
m54284U_201203_174622/168231318/ccs	chr1	+	4342	30	NIC	ENSMUSG00000056763.17	novel	1074	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_1	29.4810041825238	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCAGTGTCGGTTTCTTT	NA	False	NA	4	True	AATAAA	-17	NA	10109997	10206993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
m54284U_201203_174622/168231691/ccs	chr12	+	187	1	Intergenic	novelGene_6874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTAGTCTGTTTCATCAG	NA	False	NA	NA	False	NA	NA	NA	105635895	105636082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105635900_105636100
m54284U_201203_174622/168231934/ccs	chr10	+	1322	11	NNC	ENSMUSG00000035027.19	novel	662	7	NA	NA	351	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	211.816524379001	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1881	False	NA	13	True	NA	NA	NA	80942529	80959717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80942588_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
m54284U_201203_174622/168232462/ccs	chr17	-	213	1	Intergenic	novelGene_8657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGAACAGGGAGGGTT	NA	False	NA	NA	False	NA	NA	NA	56856847	56856634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_56856600_56856800
m54284U_201203_174622/168233364/ccs	chr18	+	1621	6	NIC	ENSMUSG00000042660.9	novel	1619	7	NA	NA	0	-89	intron_retention	FALSE	canonical	3	317	junction_1	13.2574507353412	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTAAGCCCAAACCAGG	NA	False	NA	-85	True	AATAAA	-22	NA	36893272	36896774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36896072_36896144
m54284U_201203_174622/168233452/ccs	chr13	+	3075	4	NNC	ENSMUSG00000114777.2	novel	1568	3	NA	NA	-6333	1390	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	16.0069429380573	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCTTGACTTAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	66667709	66678798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_66667826_66674049_66674177_66674374_66674436_66676027
m54284U_201203_174622/168364332/ccs	chr11	+	164	1	Intergenic	novelGene_5720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGACCTTGAACTTTTGATA	NA	False	NA	NA	False	NA	NA	NA	20180754	20180918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_20180800_20180900
m54284U_201203_174622/168364603/ccs	chr5	-	2494	17	NIC	ENSMUSG00000029554.16	novel	2640	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	48.426329357076	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGATTGTGTCCAAGGCTC	NA	False	NA	-4	True	AATAAA	-22	NA	140307307	139994448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
m54284U_201203_174622/16842783/ccs	chr5	+	4280	16	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_1	567.731258803161	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213539	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108213832_108221172_108221321_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201203_174622/168429022/ccs	chr7	+	2016	4	NIC	ENSMUSG00000006333.15	novel	1347	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	206	junction_2	3881.10124692579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAGAATTGATACTTG	1313	False	NA	-18	True	NA	NA	NA	3707040	3709875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3707064_3707325_3708919_3709006_3709181_3709649
m54284U_201203_174622/168429538/ccs	chr1	-	1229	8	NIC	ENSMUSG00000025917.10	novel	1698	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	318.204272730071	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCACGTGAAATTGTCCT	NA	False	NA	-25	True	AATAAA	-2	NA	10108374	10095067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10108143
m54284U_201203_174622/168429589/ccs	chr10	-	169	1	Intergenic	novelGene_5371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAATGTTACC	NA	False	NA	NA	False	NA	NA	NA	66832764	66832595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_66832600_66832800
m54284U_201203_174622/16843380/ccs	chr1	-	4307	26	NIC	ENSMUSG00000025982.14	novel	6195	25	NA	NA	0	-1853	combination_of_known_junctions	FALSE	canonical	2	24	junction_22	403.867602067806	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTGTGTGTGTTTTTTG	NA	False	NA	-3	True	AATAAA	-19	NA	55066553	55026184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55054027_55054084_55055534_55055650_55055937_55056043_55058392_55058560_55066497
m54284U_201203_174622/168495037/ccs	chr11	-	2240	13	NNC	ENSMUSG00000040594.20	novel	3950	12	NA	NA	0	2794	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	56.7731230425102	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTGTATATTGCTT	NA	False	NA	NA	False	NA	NA	NA	33463746	33419621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_33420267_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
m54284U_201203_174622/168691189/ccs	chr3	+	1282	4	NIC	ENSMUSG00000027937.16	novel	1101	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	314	junction_3	19.2527054375915	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTAGTGTAATCATTTG	NA	False	NA	4	True	AATAAA	-14	NA	90138918	90143145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_90139348_90139501_90139819_90141229_90141310_90142689
m54284U_201203_174622/168756702/ccs	chr5	-	3033	11	NIC	ENSMUSG00000040464.16	novel	2972	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	110.515564514687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTCTGTTCCTAATG	NA	False	NA	NA	False	GATAAA	-19	NA	5609523	5587453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5604823_5604900_5605237_5605383_5606064_5606157_5607212_5607407_5609432
m54284U_201203_174622/168757130/ccs	chr5	-	2947	14	NNC	ENSMUSG00000029169.12	novel	3010	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	222.489810949471	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTCTGTATCTTTTATT	NA	False	NA	2	True	AATAAA	-27	NA	52347856	52307544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_52308121_52309151_52309322_52311378_52311507_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
m54284U_201203_174622/168887852/ccs	chr18	-	5159	1	Antisense	novelGene_ENSMUSG00000024294.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTCAAATTATACTTAGA	NA	False	NA	NA	False	TTTAAA	-13	NA	10819182	10814023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_-_10814000_10819200
m54284U_201203_174622/169017808/ccs	chr6	-	2125	10	NNC	ENSMUSG00000030357.11	novel	2217	10	NA	NA	77	0	at_least_one_novel_splicesite	FALSE	canonical	3	411	junction_5	1634.65511898525	349	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTCAGGCAACCCT	9346	False	NA	-21	True	AATAAA	-16	NA	128415563	128407065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410742_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
m54284U_201203_174622/169018034/ccs	chr12	+	1698	8	NIC	ENSMUSG00000021268.18	novel	1896	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_3	135.363757848161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509733_109509909_109510626_109515725_109515807_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201203_174622/169018964/ccs	chr18	+	4306	23	NNC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_19	210.954579733989	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704649_42704792_42704888_42704973_42706324_42706426_42707582
m54284U_201203_174622/169019195/ccs	chr17	+	1903	10	NIC	ENSMUSG00000014767.18	novel	2067	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	107.763229258625	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTGCTTGTCTGTT	NA	False	NA	23	True	AAGAAA	-31	NA	15720183	15737689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_15720287_15721415_15721465_15721573_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
m54284U_201203_174622/169083589/ccs	chr6	+	4025	3	NNC	ENSMUSG00000036402.14	novel	1876	4	NA	NA	0	-55	at_least_one_novel_splicesite	FALSE	canonical	2	92	junction_1	138.5	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGCGTCATTGACTCCT	NA	False	NA	2	True	ATTAAA	-17	NA	66873417	66998279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_66873500_66992716_66992828_66994447
m54284U_201203_174622/169084486/ccs	chr9	-	3322	3	NIC	ENSMUSG00000004771.13	novel	2336	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	952	junction_2	28	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGTGTTTTATTACT	NA	False	NA	-4	True	AATATA	-19	NA	64645040	64624051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_64624271_64632783_64635712_64644865
m54284U_201203_174622/16908984/ccs	chr4	+	634	5	NNC	ENSMUSG00000070605.5	novel	4550	4	NA	NA	-16639	-4077	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	299.080674735095	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTGTAAACAGTTTAA	1855	False	NA	NA	False	AATACA	-2	NA	146516840	146550672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_146516986_146533486_146533556_146547961_146548020_146548860_146548988_146550437
m54284U_201203_174622/169149496/ccs	chr16	+	1512	8	NNC	ENSMUSG00000058550.16	novel	1479	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_3	208.929145298357	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGTGGCTTTTGTTTTTG	NA	False	NA	23	True	ACTAAA	-5	NA	48104149	48114600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_48104205_48108240_48108359_48108984_48109070_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
m54284U_201203_174622/169214659/ccs	chr11	+	3912	27	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	-1109	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	209.549573296247	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	NA	False	NA	40	True	AATAAA	-25	NA	115721684	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115721918_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
m54284U_201203_174622/169215169/ccs	chr9	-	3228	15	NIC	ENSMUSG00000032127.10	novel	3536	16	NA	NA	0	-166	intron_retention	FALSE	canonical	0	0	junction_14	77.2354272629458	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTATGGAGACTTTCCA	6378	False	NA	-27	True	AATAAA	-27	NA	44272967	44259390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267591_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
m54284U_201203_174622/169412927/ccs	chr8	+	2744	11	NNC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	365.657613075401	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13389147_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201203_174622/169477833/ccs	chr3	-	3135	11	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	0	1330	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	61.2409176939732	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCTTTGCTCATTGGTT	NA	False	NA	-20	True	AATAAA	-2	NA	19365486	19280218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19310941_19311026_19314395_19314457_19365027
m54284U_201203_174622/169542537/ccs	chr7	-	5801	24	Fusion	ENSMUSG00000110424.2_ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	1203	intron_retention	FALSE	canonical	1	1	junction_22	1703.68400892549	1188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTTTTTCTTCATTT	NA	False	NA	-5	True	AATAAA	-15	NA	110721891	110669935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991_110682730_110720114_110720231_110721714
m54284U_201203_174622/169674690/ccs	chr17	-	2049	14	NNC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	673.2772185495	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906498	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900433_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
m54284U_201203_174622/169675153/ccs	chr1	-	9668	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	0	intron_retention	FALSE	canonical	3	1514	junction_36	372.036440580536	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692359	71624678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
m54284U_201203_174622/169675447/ccs	chr4	-	875	2	Intergenic	novelGene_2234	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGGCTTGCATTTTAT	NA	False	NA	NA	False	NA	NA	NA	134163617	134161020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_134161794_134163515
m54284U_201203_174622/169738879/ccs	chr6	-	1590	11	NNC	ENSMUSG00000035378.18	novel	6816	11	NA	NA	0	-29223	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	83.0821280420765	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTGCGCAAATAGCC	NA	False	NA	NA	False	AATAAA	-20	NA	100648118	100579266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_100579574_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
m54284U_201203_174622/169739390/ccs	chr2	-	2934	11	NIC	ENSMUSG00000013465.20	novel	2637	13	NA	NA	202	0	intron_retention	FALSE	canonical	3	539	junction_5	54.8127722342156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101191	25089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
m54284U_201203_174622/169739908/ccs	chr17	-	5868	12	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	440	junction_8	70.858840003288	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540159	32522647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
m54284U_201203_174622/16974542/ccs	chr19	-	190	1	Intergenic	novelGene_9126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACTAGACTTGAGGAG	3012	False	NA	NA	False	NA	NA	NA	6867737	6867547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_6867500_6867700
m54284U_201203_174622/16975473/ccs	chr2	-	3981	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	965	junction_5	34.3359869524672	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	9502	False	NA	-21	True	AATAAA	-16	NA	154411812	154401553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_154402856_154402950_154403171_154403266_154405011_154405814_154406035_154406337_154406429_154411408
m54284U_201203_174622/169871714/ccs	chr11	-	3598	9	NNC	ENSMUSG00000025162.19	novel	3675	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_5	196.81272824693	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCTCCCCTTTGTGTGG	776	False	NA	-11	True	AATAAA	-22	NA	120882156	120852574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863297_120863791_120864021_120864646_120864796_120874058_120874170_120881760
m54284U_201203_174622/169934886/ccs	chr5	-	4180	27	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_26	181.643422232231	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563970
m54284U_201203_174622/169936752/ccs	chr7	+	2156	7	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	327.553897176565	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896233_43896674_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/170000771/ccs	chr7	-	3963	20	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	232	junction_7	21.4275820903392	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9941	False	NA	-3	True	AATAAA	-17	NA	4504679	4484518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
m54284U_201203_174622/170001786/ccs	chr8	-	2979	1	FSM	ENSMUSG00000083557.2	ENSMUST00000119347.2	1101	1	-36	-1842	-36	1842	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATCAGGGATAGAAGGTC	NA	False	NA	NA	False	GATAAA	-26	NA	33682360	33679381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_33679400_33682400
m54284U_201203_174622/170003233/ccs	chr11	-	3146	11	NIC	ENSMUSG00000010025.20	novel	3091	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	38.2758409443868	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTGTGTTAATTTTGA	1391	False	NA	NA	False	AATAAA	-14	NA	61157953	61135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61137148_61138754_61138868_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
m54284U_201203_174622/170065927/ccs	chr1	+	233	1	Intergenic	novelGene_319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTTGAAAGTGCTTGT	NA	False	NA	NA	False	AGTAAA	-14	NA	133037234	133037467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_133037200_133037500
m54284U_201203_174622/170066187/ccs	chr19	-	2556	3	Genic_Genomic	ENSMUSG00000095993.2	novel	168	1	NA	NA	-16435	1719	multi-exon	FALSE	canonical	2	4	junction_1	19	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAAAAATATAAATTAAA	NA	False	NA	NA	False	NA	NA	NA	61301942	61283620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_61285953_61287295_61287423_61301845
m54284U_201203_174622/170066201/ccs	chr17	+	3069	16	NNC	ENSMUSG00000024151.14	novel	3283	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_15	444.352892792804	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGGTACCTTGTATT	4871	False	NA	19	True	AATAAA	-16	NA	87979967	88031141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030762
m54284U_201203_174622/170067997/ccs	chr3	+	4146	15	NIC	ENSMUSG00000040389.16	novel	4222	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	13.7300876225335	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCCTTTTCTCACGGTC	NA	False	NA	3	True	AATAAA	-18	NA	108498667	108553035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
m54284U_201203_174622/170133881/ccs	chr2	+	1445	10	NIC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	322.548340716187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGACTTGGGGGTTT	1936	False	NA	NA	False	NA	NA	NA	5850063	5873547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_5850197_5852918_5853002_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869260_5871164_5871219_5872899
m54284U_201203_174622/170197100/ccs	chr15	+	2071	11	NIC	ENSMUSG00000022561.14	novel	2107	12	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	245	junction_2	20.9035882087263	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	4826	False	NA	24	True	AATAAA	-27	NA	76215543	76219107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
m54284U_201203_174622/170198619/ccs	chr8	+	3521	12	NNC	ENSMUSG00000034807.10	novel	3207	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_9	265.381808216448	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTTTGGTGCCCC	NA	False	NA	30	True	ATTAAA	-22	NA	72063814	72077555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72074859_72075475_72075733_72075941_72076136
m54284U_201203_174622/170264338/ccs	chr15	+	1701	7	NNC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	4137	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	64.6838465151849	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	NA	False	NA	12	True	TATAAA	-21	NA	101126205	101130637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_101126281_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
m54284U_201203_174622/170264893/ccs	chr14	+	3783	24	NNC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	114.037154426933	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043975	32070108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_32044134_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
m54284U_201203_174622/170264970/ccs	chr2	+	2286	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	983	combination_of_known_splicesites	FALSE	canonical	3	127	junction_7	831.247339177028	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896542	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201203_174622/170330260/ccs	chr17	+	4568	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_12	34.4730401309163	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701795_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
m54284U_201203_174622/170330812/ccs	chr8	-	6577	21	NIC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_20	51.2654610824871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296547	126144812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219573_126296393
m54284U_201203_174622/170394238/ccs	chr3	-	2807	1	NIC	ENSMUSG00000037652.16	novel	3491	17	NA	NA	0	-8212	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	31023554	31020747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_31020700_31023600
m54284U_201203_174622/170395350/ccs	chr1	-	1922	13	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	150.066721272017	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTCATGTTTGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	171115532	171109522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171114183_171114544_171115334
m54284U_201203_174622/17040200/ccs	chr5	+	141	1	Intergenic	novelGene_2686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAACAAATAAA	NA	False	NA	NA	False	NA	NA	NA	97276835	97276976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_97276800_97277000
m54284U_201203_174622/17040412/ccs	chrX	+	192	1	Intergenic	novelGene_9611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAAGTCCCATGCA	NA	False	NA	NA	False	NA	NA	NA	110212757	110212949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_110212800_110212900
m54284U_201203_174622/170459672/ccs	chr13	+	7892	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	0	-1705	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_23	56.5490046822714	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGGGCTCTCAAGGCT	NA	False	NA	57	True	NA	NA	NA	55359631	55461863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
m54284U_201203_174622/170459988/ccs	chr17	+	4901	24	NIC	ENSMUSG00000036636.11	novel	4071	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	111	junction_7	12.1627277808041	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATTTTTATTTTGACT	NA	False	NA	20	True	NA	NA	NA	25352364	25381078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
m54284U_201203_174622/170460505/ccs	chr16	+	181	1	Intergenic	novelGene_8281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATGTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	55716382	55716563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_55716400_55716600
m54284U_201203_174622/170591771/ccs	chr15	+	4602	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_3	192.622735852617	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	80	False	NA	30	True	ATTAAA	-20	NA	12824975	12935377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
m54284U_201203_174622/170591905/ccs	chr17	-	1480	5	NNC	ENSMUSG00000039615.10	novel	1498	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	73	junction_3	638.200791287507	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6753	False	NA	-19	True	AATAAA	-15	NA	26051927	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_26049985_26050075_26050606_26050769_26050884_26051019_26051219_26051665
m54284U_201203_174622/1706108/ccs	chr11	+	3216	16	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	862	junction_13	84.4558004060243	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455259	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
m54284U_201203_174622/1706386/ccs	chr10	-	5806	9	NIC	ENSMUSG00000020170.5	novel	6420	10	NA	NA	0	-595	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	38.4285050450834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGAGTGTGGCTTTGTGG	NA	False	NA	-1	True	AATAAA	-19	NA	116984439	116905926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116938017_116938104_116984296
m54284U_201203_174622/170721578/ccs	chr19	+	3977	8	NIC	ENSMUSG00000039126.11	novel	2115	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	24.5165500119775	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGTTTCCTCTTTCA	NA	False	NA	2	True	AATAAA	-14	NA	17114129	17201296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_17114256_17145626_17145707_17156153_17156355_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17198147
m54284U_201203_174622/170722210/ccs	chr11	+	472	5	NNC	ENSMUSG00000086841.2	novel	462	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	1867.01606849004	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGCCAGTGTTTTGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	62493702	62495633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_62493860_62494060_62494109_62494422_62494473_62495228_62495293_62495480
m54284U_201203_174622/170788564/ccs	chr19	+	5088	14	NIC	ENSMUSG00000055491.15	novel	5246	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_4	105.735071407002	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045019	46061240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050934_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
m54284U_201203_174622/170788909/ccs	chr4	+	1805	9	NNC	ENSMUSG00000033423.17	novel	1719	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_8	255.666011380082	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407541	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506670_117530937
m54284U_201203_174622/170852901/ccs	chr2	-	5730	28	NNC	ENSMUSG00000068394.5	novel	5768	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_22	10.2094660075404	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCATGACTTATTTT	NA	False	NA	0	True	AATAAA	-18	NA	125467033	125405007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456314_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
m54284U_201203_174622/170853661/ccs	chr19	+	186	1	Intergenic	novelGene_9090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATAATGCAGCAGCAG	NA	False	NA	NA	False	NA	NA	NA	4898969	4899155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4899000_4899200
m54284U_201203_174622/170918210/ccs	chr19	+	5927	33	NIC	ENSMUSG00000024921.18	novel	5913	33	NA	NA	86	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_10	6.89535339467819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCTTTTCTTTTA	NA	False	NA	63	True	AATAAA	-18	NA	26584755	26755721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_26584944_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
m54284U_201203_174622/170918603/ccs	chr2	-	192	1	Intergenic	novelGene_1189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTCCTAACAAAGTCCA	1252	False	NA	NA	False	NA	NA	NA	157203260	157203068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_157203100_157203300
m54284U_201203_174622/170918822/ccs	chrX	+	2361	17	NIC	ENSMUSG00000060681.16	novel	4976	16	NA	NA	0	376	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	37.5097903886439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATCTGAGTACCGAGT	NA	False	NA	23	True	CATAAA	-25	NA	55655134	55707117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_55655181_55655322_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
m54284U_201203_174622/170919806/ccs	chr1	+	4169	21	NIC	ENSMUSG00000037995.16	novel	636	6	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	3.57631094844953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCACCTCTCTTTGTG	NA	False	NA	5	True	AATAAA	-17	NA	172309354	172326445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_172309436_172311847_172312114_172312348_172312538_172317079_172317233_172317855_172318011_172318221_172318340_172319181_172319324_172319431_172319578_172319667_172319811_172321053_172321195_172321664_172321782_172321972_172322124_172322319_172322444_172322674_172322851_172323100_172323352_172323549_172323635_172323717_172323895_172324164_172324208_172324452_172325314_172325563_172325692_172325923
m54284U_201203_174622/170984203/ccs	chr6	+	188	1	Intergenic	novelGene_3122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACTTTCATCTGTGGCA	NA	False	NA	NA	False	NA	NA	NA	28466464	28466652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_28466500_28466700
m54284U_201203_174622/170984924/ccs	chr10	+	4528	18	NIC	ENSMUSG00000019978.17	novel	3621	16	NA	NA	-269	0	intron_retention	FALSE	canonical	3	29	junction_1	82.230833843529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25308227	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_25308761_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201203_174622/170985533/ccs	chr3	+	1738	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	329	junction_1	59.5566956773124	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	7072	False	NA	16	True	AATAAA	-24	NA	108291194	108295495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108294053_108294593_108294712_108294914
m54284U_201203_174622/171049693/ccs	chr4	+	4177	1	NIC	ENSMUSG00000043572.8	novel	2191	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGTGTGTGTGTGTG	NA	False	NA	5	True	AATAAA	-20	NA	106508302	106512479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_106508300_106512500
m54284U_201203_174622/17105677/ccs	chr8	+	122	1	Intergenic	novelGene_4441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAATAAATCT	NA	False	NA	NA	False	NA	NA	NA	106480206	106480328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106480200_106480300
m54284U_201203_174622/17107718/ccs	chr14	+	7904	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	46.1102543427767	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8215	False	NA	14	True	AATAAA	-21	NA	30741094	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30744676_30744817_30747457_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
m54284U_201203_174622/171115800/ccs	chr2	-	1593	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	110	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	129.063587902329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839288	48795217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48827463_48827541_48830344_48830413_48839128
m54284U_201203_174622/171116079/ccs	chr1	+	3525	4	NIC	ENSMUSG00000026435.16	novel	3212	5	NA	NA	-13	0	intron_retention	FALSE	canonical	3	24	junction_3	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGTCTTTTCTGT	NA	False	NA	NA	False	ATTAAA	-23	NA	131890691	131910707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_131890791_131904455_131905937_131906485_131906752_131909028
m54284U_201203_174622/171117265/ccs	chr2	-	2014	6	ISM	ENSMUSG00000053166.15	ENSMUST00000138643.2	2521	11	39146	-820	39146	0	3prime_fragment	FALSE	canonical	1	4	junction_5	6.91664658631623	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTATCCTTGTGGTTACT	NA	False	NA	-5	True	NA	NA	NA	164984233	164953426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_164954614_164958059_164958312_164965435_164965554_164965641_164965764_164977103_164977241_164984035
m54284U_201203_174622/171245596/ccs	chr9	+	4233	10	NIC	ENSMUSG00000032531.16	novel	4222	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	66.725159524577	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATT	NA	False	NA	17	True	AATAAA	-20	NA	102593870	102610617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_102594011_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
m54284U_201203_174622/171247682/ccs	chr11	+	2198	5	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	232.294398339693	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_96680180_96691599_96691774_96692254_96692433_96693553_96693649_96697441
m54284U_201203_174622/171248117/ccs	chr15	-	4112	12	NIC	ENSMUSG00000037458.16	novel	4871	12	NA	NA	0	55	combination_of_known_junctions	FALSE	canonical	2	62	junction_3	129.988874285519	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATATTGCCCACG	NA	False	NA	-1	True	AATAGA	-21	NA	38519510	38488426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
m54284U_201203_174622/171311667/ccs	chr5	+	6883	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	88.2547116062797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887788	123959656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
m54284U_201203_174622/171377452/ccschrUn	chrUn_JH584304v1	-	2789	5	Intergenic	novelGene_9764	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_3	350.836500381588	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59020	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55249_55464_55702_58563
m54284U_201203_174622/171378847/ccs	chr3	+	1366	5	NNC	ENSMUSG00000027952.17	novel	1194	5	NA	NA	92	26519	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	236.773098134057	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCTGTGGCTGTGTTGTC	232	False	NA	NA	False	NA	NA	NA	89366516	89402839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89402075
m54284U_201203_174622/171442781/ccs	chr6	-	1988	10	NIC	ENSMUSG00000030051.11	novel	1889	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	41	junction_3	13.2030673577893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGATCTTCTGCCCTGA	NA	False	NA	-7	True	AATAAA	-20	NA	87649175	87606725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
m54284U_201203_174622/171444806/ccs	chr8	-	181	1	Intergenic	novelGene_4564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGAATCCCGTCT	NA	False	NA	NA	False	NA	NA	NA	122656713	122656532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_122656500_122656700
m54284U_201203_174622/171508997/ccs	chr1	+	2526	1	Intergenic	novelGene_552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTAACATAAGGTGAATAA	9392	False	NA	NA	False	NA	NA	NA	191107813	191110339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_191107800_191110300
m54284U_201203_174622/171509136/ccs	chr9	+	3019	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	156	junction_19	153.943760641486	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGATGTGTCTCCTT	5879	False	NA	20	True	AATAAA	-21	NA	21336240	21419055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
m54284U_201203_174622/171510333/ccs	chr9	+	1838	13	NIC	ENSMUSG00000023495.14	novel	2035	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	99.8749217771909	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGCAGTAATACTAGTG	1600	False	NA	27	True	AATAAA	-20	NA	106331040	106341211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
m54284U_201203_174622/171574875/ccs	chr9	-	1528	11	NNC	ENSMUSG00000032579.15	novel	2192	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	53.3310416174295	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAATGGTGAGCCAGTA	NA	False	NA	-30	True	AGTAAA	-13	NA	107215549	107204908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214237_107214578_107215479
m54284U_201203_174622/171575853/ccs	chr12	+	2227	15	NNC	ENSMUSG00000017843.15	novel	2790	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_14	367.682455054769	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGTGTGTATTTTCCTA	NA	False	NA	14	True	AATAAA	-16	NA	110413553	110538122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_110413820_110414405_110414472_110432282_110432455_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110537631
m54284U_201203_174622/171704871/ccs	chr8	+	4751	3	NIC	ENSMUSG00000047388.11	novel	4877	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	156	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGTGAATCTTGT	NA	False	NA	24	True	ATTAAA	-18	NA	117670131	117687184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_117670490_117681452_117681653_117682991
m54284U_201203_174622/171705359/ccs	chr17	-	196	1	Intergenic	novelGene_8447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	27286991	27286795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_27286800_27287000
m54284U_201203_174622/171706369/ccs	chr11	-	2105	13	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	831	junction_12	105.792905664269	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96798949_96799055_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
m54284U_201203_174622/171707224/ccs	chr16	+	5386	32	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	67	junction_2	344.240701791684	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492348_20492406_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/17171347/ccs	chrX	-	192	1	Intergenic	novelGene_9601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTCTCCAGCTTGAGT	NA	False	NA	NA	False	NA	NA	NA	105016652	105016460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_105016500_105016700
m54284U_201203_174622/17171576/ccs	chr6	-	3518	20	NIC	ENSMUSG00000038429.11	novel	3213	20	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_19	266.421551705744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7856	False	NA	-8	True	AATAAA	-15	NA	124806447	124791981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124792623_124793946_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124804977_124805103_124806247
m54284U_201203_174622/171772665/ccs	chr11	+	5296	17	NIC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	31.7736132663567	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93777032	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
m54284U_201203_174622/171836543/ccs	chr13	+	171	1	Intergenic	novelGene_7101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGACTCCTTCAGTG	979	False	NA	NA	False	NA	NA	NA	55479636	55479807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55479600_55479800
m54284U_201203_174622/171836892/ccs	chr2	-	1853	6	NNC	ENSMUSG00000005973.7	novel	2720	6	NA	NA	-775	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	770.421546946865	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATGTGTCTTGTGGTGT	NA	False	NA	-4	True	AATAAA	-19	NA	105226468	105217273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225141_105225218_105226229
m54284U_201203_174622/171968311/ccs	chr10	-	2733	15	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	145.213635723371	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417405	116321070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116363731_116363855_116384937_116385081_116417357
m54284U_201203_174622/171968664/ccs	chr5	+	2277	6	NIC	ENSMUSG00000014956.16	novel	5962	8	NA	NA	110	0	intron_retention	FALSE	canonical	0	0	junction_1	552.155050687757	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTGAGTGATTATTCTGT	3184	False	NA	23	True	AGTAAA	-20	NA	32616675	32650100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_32616752_32640769_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
m54284U_201203_174622/171968720/ccs	chr7	+	3527	15	NIC	ENSMUSG00000035545.14	novel	5105	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	108.968657729399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGCCTGTTTTA	92	False	NA	20	True	ATTAAA	-20	NA	4140047	4151176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4140151_4141694_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
m54284U_201203_174622/172032667/ccs	chr5	+	177	1	Intergenic	novelGene_2886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAATCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	123623885	123624062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123623900_123624100
m54284U_201203_174622/172098554/ccs	chr4	+	2898	12	NIC	ENSMUSG00000042228.15	novel	3463	13	NA	NA	0	-518	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	13.7696516217777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATTCTCAACTCTTGTC	-7	True	NA	37	True	AATACA	-34	NA	3678114	3791094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_3678365_3738724_3738862_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
m54284U_201203_174622/172165981/ccs	chr18	+	3084	10	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	92.3196272752816	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	969	False	NA	23	True	AATAAA	-28	NA	38429730	38450902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_38429852_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
m54284U_201203_174622/172228854/ccs	chr5	+	154	1	Intergenic	novelGene_2750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATCTTTTTAAGAA	NA	False	NA	NA	False	NA	NA	NA	108561404	108561558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108561400_108561600
m54284U_201203_174622/172230194/ccs	chr4	+	1712	14	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	0	136	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	253.614533023931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155954178_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
m54284U_201203_174622/172230581/ccs	chr19	+	4599	4	NIC	ENSMUSG00000053080.11	novel	4989	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17.3076733143296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTTTTTATTTA	NA	False	NA	NA	False	AATAAA	-20	NA	7394989	7403269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_7395283_7397431_7397927_7399278_7399828_7400007
m54284U_201203_174622/172231115/ccs	chr9	+	5650	24	NIC	ENSMUSG00000040325.17	novel	5539	23	NA	NA	94	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_23	71.1541365847348	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTTTCTTTTACC	NA	False	NA	16	True	AATAAA	-27	NA	106699166	106758191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757135
m54284U_201203_174622/172296291/ccs	chr16	-	3962	21	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	164	junction_14	30.921634820947	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201203_174622/172361329/ccs	chr6	+	6337	27	NIC	ENSMUSG00000030016.15	novel	6199	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	162	junction_24	66.2109436064344	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTGTTTGTGTTGA	NA	False	NA	NA	False	AATAAA	-22	NA	83891355	83963853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
m54284U_201203_174622/172361463/ccs	chr4	+	5340	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_3	150.339585371602	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445467_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/17237241/ccs	chr5	+	3920	3	NIC	ENSMUSG00000045294.12	novel	2697	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	1139	junction_2	44.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGTATTCCTGAGGTT	NA	False	NA	14	True	ATTAAA	-13	NA	28276360	28283660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_28276794_28278544_28280160_28281788
m54284U_201203_174622/17238608/ccs	chr14	+	246	1	Intergenic	novelGene_7538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTATATTAAAACAAAAAAG	NA	False	NA	NA	False	AAAAAG	-41	NA	73681856	73682102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_73681900_73682100
m54284U_201203_174622/17238850/ccs	chr18	-	4471	20	NIC	ENSMUSG00000048799.9	novel	4554	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	72.40257567234	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTGGTCGGTCTCTTT	NA	False	NA	-1	True	AATAAA	-24	NA	53877635	53814794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_53816537_53818954_53819101_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
m54284U_201203_174622/172426240/ccs	chr2	+	4953	22	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_12	64.8651487961345	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4642	False	NA	12	True	AATAAA	-16	NA	18069446	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201203_174622/172426560/ccs	chr5	-	4404	24	NIC	ENSMUSG00000036555.15	novel	2494	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	8.69652169565652	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTTTGGCAGGTG	4450	False	NA	NA	False	AGTAAA	-18	NA	140688094	140649259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_140651249_140651762_140651964_140654776_140654861_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
m54284U_201203_174622/172491413/ccs	chr2	-	196	1	Intergenic	novelGene_673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGGAAAGGAAAAAGAG	6669	False	NA	NA	False	NA	NA	NA	29863536	29863340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29863300_29863500
m54284U_201203_174622/172557254/ccs	chr8	-	3043	13	NNC	ENSMUSG00000035569.18	novel	8455	13	NA	NA	0	496	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_4	107.656346254593	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCACTGTCCCTTCAGG	NA	False	NA	NA	False	NA	NA	NA	123769016	123610064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123622542_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
m54284U_201203_174622/172557342/ccs	chr12	+	7062	20	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_2	152.043021320973	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3981	False	NA	13	True	AATAAA	-13	NA	83679025	83729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
m54284U_201203_174622/172557585/ccs	chr2	+	4066	12	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	302	junction_8	32.9823393764572	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3998	False	NA	33	True	ATTAAA	-21	NA	25222773	25242224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238704_25239181_25239380_25239462_25239595_25240373
m54284U_201203_174622/172557825/ccs	chr6	+	175	1	Intergenic	novelGene_3280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATACTA	NA	False	NA	NA	False	NA	NA	NA	54021759	54021934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_54021800_54021900
m54284U_201203_174622/172622536/ccs	chr7	+	2225	19	NIC	ENSMUSG00000040811.16	novel	596	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	28.4707452191426	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGAGTCTGGTCTATT	NA	False	NA	25	True	AATACA	-17	NA	18915256	18940407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_18915281_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
m54284U_201203_174622/172688281/ccs	chr18	+	2322	1	Antisense	novelGene_ENSMUSG00000024533.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATCACCCCATGAATTC	NA	False	NA	NA	False	NA	NA	NA	67633376	67635698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_+_67633400_67635700
m54284U_201203_174622/172755448/ccs	chr17	-	2765	7	NNC	ENSMUSG00000033972.10	novel	2784	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	35.1946965701747	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22580381	22556969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22559089_22559947_22560075_22562620_22562675_22574061_22574116_22577803_22577897_22578420_22578506_22580148
m54284U_201203_174622/172820562/ccs	chr16	-	3509	23	NIC	ENSMUSG00000022843.18	novel	3128	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	159	junction_9	36.3188360391639	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201203_174622/172821330/ccs	chr12	-	2105	8	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_6	101.263245543283	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490609	87474846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_87476041_87478169_87478309_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
m54284U_201203_174622/172885385/ccs	chr5	-	1883	5	NNC	ENSMUSG00000085271.8	novel	906	5	NA	NA	0	603	intron_retention	FALSE	canonical	2	8	junction_4	1.08972473588517	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCATTTTTTCCTCATG	NA	False	NA	NA	False	AATAGA	-11	NA	111909569	111881546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_111883050_111886992_111887080_111887701_111887776_111895707_111895859_111909501
m54284U_201203_174622/172950404/ccs	chr18	-	122	1	Intergenic	novelGene_9004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACTGAGTGGTAGGA	NA	False	NA	NA	False	AATGAA	-34	NA	67897494	67897372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_67897400_67897500
m54284U_201203_174622/173017152/ccs	chr9	-	4050	9	NIC	ENSMUSG00000004661.16	novel	4171	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	208	junction_3	16.1303285769385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAGTATGGGATCCTT	NA	False	NA	-6	True	AATAAA	-17	NA	57744076	57697638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
m54284U_201203_174622/17303837/ccs	chr1	-	3094	23	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	-169	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_22	135.081365134542	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAACAGATATCTATTA	NA	False	NA	-11	True	AATAAA	-12	NA	180971769	180920992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969957_180971615
m54284U_201203_174622/173081492/ccs	chr16	+	5332	31	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	374.715323056495	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/173082217/ccs	chr11	-	1598	6	NNC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	52	0	intron_retention	FALSE	canonical	3	30	junction_4	59.4521656460049	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTGGGAGATTGTCTCT	NA	False	NA	1	True	ATTAAA	-21	NA	77404144	77398924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403493_77403792_77403985
m54284U_201203_174622/173082493/ccs	chr17	-	2941	17	NIC	ENSMUSG00000023932.10	novel	3027	16	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	5	junction_7	227.303898998675	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAGCCTTTTGTTTGAA	2380	False	NA	-2	True	AATAAA	-20	NA	45744467	45702809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45723450_45723561_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
m54284U_201203_174622/173082928/ccs	chr3	+	1743	7	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	155	junction_1	118.602510747267	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	7032	False	NA	16	True	AATAAA	-24	NA	108291154	108295495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108291212_108291551_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
m54284U_201203_174622/173146748/ccs	chr6	+	5081	17	NIC	ENSMUSG00000057230.15	novel	19341	21	NA	NA	0	679	combination_of_known_junctions	FALSE	canonical	2	13	junction_13	8.0156097709407	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCAGTTGTCCTTGCA	NA	False	NA	16	True	AGTAAA	-17	NA	86826498	86975283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86826634_86826813_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86972821
m54284U_201203_174622/173146914/ccs	chr17	-	6393	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	442	junction_5	44.4747119158742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343295	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46329806_46331916_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
m54284U_201203_174622/173147714/ccs	chr3	+	3734	14	NIC	ENSMUSG00000027936.19	novel	2747	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_11	29.6114882551754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCTTGGCTATTTGGT	NA	False	NA	NA	False	AATAAA	-19	NA	90161602	90171432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_90161866_90164423_90164526_90164601_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170220_90170288_90170477_90170665_90170786
m54284U_201203_174622/173148406/ccs	chr3	+	3403	8	NIC	ENSMUSG00000028093.16	novel	1754	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1030	junction_1	88.5896294663184	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATCATGTTGAGATCAA	NA	False	NA	17	True	AATAAA	-17	NA	97066092	97083834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_97066682_97073158_97073288_97073389_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
m54284U_201203_174622/173212545/ccs	chr9	+	4247	10	NIC	ENSMUSG00000032531.16	novel	3475	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	65.4896090146283	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTCTGTCTGTCTATT	NA	False	NA	17	True	AATAAA	-20	NA	102594487	102610617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_102594642_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
m54284U_201203_174622/173212884/ccs	chr16	+	867	8	NNC	ENSMUSG00000022652.8	novel	3045	27	NA	NA	17038	0	at_least_one_novel_splicesite	FALSE	canonical	3	194	junction_1	345.998525418587	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAGAAAACATTTCCTT	733	False	NA	11	True	AATAAA	-16	NA	48432067	48451263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_48432112_48432651_48432725_48436057_48436125_48438864_48439015_48442924_48443013_48444652_48444707_48447275_48447471_48451067
m54284U_201203_174622/173278189/ccs	chr11	-	3191	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	475.283288241479	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
m54284U_201203_174622/173343312/ccs	chr3	+	2078	12	NIC	ENSMUSG00000027884.17	novel	2224	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	23.1716555264122	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTCTGGTGTGCAGTC	6632	False	NA	6	True	AATAAA	-18	NA	108561264	108586156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108561368_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
m54284U_201203_174622/173343562/ccs	chr14	-	181	1	Intergenic	novelGene_7576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCAGGTGTCCTGTCAAAA	5189	False	NA	NA	False	NA	NA	NA	99334544	99334363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_99334400_99334500
m54284U_201203_174622/173344288/ccs	chr2	-	391	1	Intergenic	novelGene_1274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAGCATTTTGACCATA	2337	False	NA	NA	False	NA	NA	NA	168720211	168719820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168719800_168720200
m54284U_201203_174622/173344924/ccs	chr4	-	4309	6	NIC	ENSMUSG00000040928.16	novel	4426	7	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_5	75.8762149820351	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATATGTACTGTGGCCGTC	1188	False	NA	-5	True	AATAAA	-15	NA	129083335	129041797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129083164
m54284U_201203_174622/173345005/ccs	chr4	-	176	1	Intergenic	novelGene_1979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAATTGAC	NA	False	NA	NA	False	NA	NA	NA	106931357	106931181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_106931200_106931400
m54284U_201203_174622/173410174/ccs	chr16	-	3060	7	NIC	ENSMUSG00000004462.8	novel	2980	8	NA	NA	0	-433	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	32.7193452800565	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACATAGAGCATTATTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	22676294	22636595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22675504
m54284U_201203_174622/173410198/ccs	chr2	+	2072	5	NIC	ENSMUSG00000027229.6	novel	2115	7	NA	NA	92	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	51.9055632856441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTTTCTCAAAGTGAT	2037	False	NA	NA	False	AATAAA	-15	NA	122016844	122036878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_122017027_122018390_122018531_122023712_122023787_122028866_122028956_122035291
m54284U_201203_174622/173606989/ccs	chr17	+	210	1	Intergenic	novelGene_8470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGCTGGGGATCTAATG	NA	False	NA	NA	False	NA	NA	NA	29126511	29126721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29126500_29126700
m54284U_201203_174622/173607290/ccs	chr4	-	2780	7	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	572.977214982314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327279	141303372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141322534_141322791_141323205_141323260_141327158
m54284U_201203_174622/173671525/ccs	chr9	+	4277	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_2	165.889491081918	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCCTTTTTGAAAT	NA	False	NA	20	True	AATAAA	-26	NA	48896684	48953817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_48896838_48911650_48911786_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
m54284U_201203_174622/173672651/ccs	chr9	+	4484	26	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	42	junction_23	210.212463950166	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290869	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300878_44300925_44302132_44302184_44302285
m54284U_201203_174622/173736354/ccs	chr5	-	1429	8	NNC	ENSMUSG00000029103.17	novel	2981	8	NA	NA	0	89	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_2	299.112223837441	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCGAGTCCTTGCCTG	NA	False	NA	-9	True	AATACA	-14	NA	35263040	35250323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_35250731_35252193_35252368_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
m54284U_201203_174622/173738671/ccs	chr15	-	1796	4	NIC	ENSMUSG00000053929.18	novel	1854	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	309.356680153436	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTATCCTGTCTGTG	NA	False	NA	-10	True	AATAAA	-15	NA	76541120	76531135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76531969_76532298_76532511_76533140_76533331_76540559
m54284U_201203_174622/173803334/ccs	chrX	+	3225	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	188.637261772232	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
m54284U_201203_174622/173867795/ccs	chr15	+	7332	39	NNC	ENSMUSG00000037646.11	novel	13757	62	NA	NA	0	-48994	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_20	11.9311564014052	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGAACATACTTTTTA	166	False	NA	15	True	AATAAA	-16	NA	35371711	35794686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576527_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450
m54284U_201203_174622/173869196/ccs	chr11	+	4259	23	NIC	ENSMUSG00000020456.18	novel	621	3	NA	NA	149	0	combination_of_known_junctions	FALSE	canonical	1	11	junction_1	147.405951246244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6242320	6306642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_6242514_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
m54284U_201203_174622/173869409/ccs	chr6	+	2593	11	NIC	ENSMUSG00000029670.13	novel	3800	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	44.129468612255	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCGTGATGTGGCAGTTA	NA	False	NA	22	True	AATATA	-21	NA	21949569	21974902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_21949793_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
m54284U_201203_174622/173934069/ccs	chr5	-	4316	27	NIC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	73.3449033817007	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777621	108717285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
m54284U_201203_174622/173934401/ccs	chr15	+	5824	23	NIC	ENSMUSG00000022272.18	novel	5880	21	NA	NA	229	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	149.870088371328	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	58	False	NA	16	True	AATAAA	-17	NA	25753293	25813759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_25753407_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
m54284U_201203_174622/173935437/ccs	chr6	+	1891	13	NIC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	284.972062470848	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGATTCAATAAGGTTAA	NA	False	NA	NA	False	NA	NA	NA	50087228	50175307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_50087435_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
m54284U_201203_174622/173999515/ccs	chr5	-	3594	18	NIC	ENSMUSG00000042508.17	novel	3806	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_6	60.8953950225146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAGCCATGCAATTA	NA	False	NA	-1	True	AATAAA	-24	NA	9211737	9168867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176644_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
m54284U_201203_174622/174194846/ccs	chr16	+	3024	19	NIC	ENSMUSG00000022779.17	novel	2950	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	114.03325538339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688620	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_16688763_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
m54284U_201203_174622/174196069/ccs	chr14	+	4562	24	NIC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_1	98.5648817623407	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724403	20744920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_20724457_20725798_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
m54284U_201203_174622/174197297/ccs	chr16	+	3206	7	NIC	ENSMUSG00000022750.19	novel	2544	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	164.993350034344	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCTACAGTCTGAGTTT	NA	False	NA	19	True	AATAAA	-28	NA	17577540	17611246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_17578215_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
m54284U_201203_174622/174262408/ccs	chr5	+	1598	10	NIC	ENSMUSG00000067367.10	novel	1563	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	190	junction_2	843.03156656333	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGATAACAAATTCTTG	NA	False	NA	23	True	AATAAA	-24	NA	38377872	38391650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_38377980_38380477_38380572_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
m54284U_201203_174622/174262416/ccs	chr9	+	2022	14	NIC	ENSMUSG00000032872.17	novel	2644	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	62	junction_8	234.467696264786	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGTGGTGGACGTGTG	NA	False	NA	11	True	AATAAA	-22	NA	86904139	86959434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
m54284U_201203_174622/174326685/ccs	chr5	-	1273	7	NNC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	0	10188	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	86.7437157506077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCATGGAAATTTTCTGCA	NA	False	NA	NA	False	AATAAA	-20	NA	105007659	104950846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_104951336_104952168_104952309_104953146_104953426_104963251_104963302_104964564_104964626_104964862_104964990_105007532
m54284U_201203_174622/17434027/ccs	chr1	+	3047	16	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	140.598182381171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175734171_175734227_175735995
m54284U_201203_174622/17435396/ccs	chr8	-	2566	1	Intergenic	novelGene_4616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAACCCATTTTGAGGGT	NA	False	NA	NA	False	NA	NA	NA	127908332	127905766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_127905800_127908300
m54284U_201203_174622/174523439/ccs	chr13	+	187	1	Intergenic	novelGene_7037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGGAATAAACTC	NA	False	NA	NA	False	NA	NA	NA	43493048	43493235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_43493000_43493200
m54284U_201203_174622/174587976/ccs	chr5	-	5318	13	NIC	ENSMUSG00000046985.12	novel	3513	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_1	11.6213405231735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACTGAATTTCTTGTGG	NA	False	NA	0	True	AATAAA	-27	NA	44383968	44332500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_44334525_44336202_44336364_44340039_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
m54284U_201203_174622/174590423/ccs	chrX	-	1820	8	NIC	ENSMUSG00000031387.15	novel	1418	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1962	junction_4	96.4504737030929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGCGCGCCTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	72974456	72965726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72974124_72974319
m54284U_201203_174622/174654908/ccs	chrX	-	186	1	Intergenic	novelGene_9618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAGTACTTCTATGTA	NA	False	NA	NA	False	NA	NA	NA	117161083	117160897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_117160900_117161100
m54284U_201203_174622/174656030/ccs	chr1	-	3386	21	NIC	ENSMUSG00000026458.14	novel	6067	29	NA	NA	294	0	intron_retention	FALSE	canonical	2	11	junction_1	12.4638477205075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTCCTGCTTGGACTA	NA	False	NA	-6	True	AATAAA	-13	NA	134254710	134226118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553
m54284U_201203_174622/174656160/ccs	chrX	+	3514	15	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	15	junction_11	44.9721001946581	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCCATTGACCTTGA	NA	False	NA	7	True	AATAAA	-18	NA	158197567	158281753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158275319_158275408_158275893_158276081_158279030_158279306_158280579
m54284U_201203_174622/174720930/ccs	chrX	+	5307	28	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	0	-414	combination_of_known_junctions	FALSE	canonical	3	25	junction_12	40.8616387994563	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTTTGAGTTTTAA	NA	False	NA	10	True	ATTAAA	-23	NA	18028875	18145761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
m54284U_201203_174622/174850680/ccs	chr7	+	2659	12	NIC	ENSMUSG00000035203.17	novel	2565	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	53.7554917432813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTCCCTTAAATTC	1308	False	NA	21	True	AATAAA	-15	NA	5083233	5101177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_5083638_5085016_5085121_5086728_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098889_5098974_5100152_5100411_5100570
m54284U_201203_174622/174850975/ccs	chr11	+	6441	33	NNC	ENSMUSG00000020721.17	novel	3753	14	NA	NA	-1069	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	38.1200688409334	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	9349	False	NA	9	True	AATAAA	-17	NA	107437686	107577769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_107437878_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
m54284U_201203_174622/174852590/ccs	chr1	-	6708	41	NNC	ENSMUSG00000026219.15	novel	6442	41	NA	NA	-222	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_25	249.300439981561	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7665	False	NA	17	True	NA	NA	NA	84817254	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
m54284U_201203_174622/174982995/ccs	chr4	+	172	1	Intergenic	novelGene_1940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTTTAAAAAAACAGATT	NA	False	NA	NA	False	NA	NA	NA	98679846	98680018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_98679800_98680000
m54284U_201203_174622/174983746/ccs	chr1	+	4016	5	NIC	ENSMUSG00000042751.15	novel	539	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	18.7799760383234	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTGTGTCTTTGT	NA	False	NA	13	True	AATAAA	-14	NA	152969225	152995007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_152969301_152969782_152969860_152987887_152987990_152988125_152988194_152991313
m54284U_201203_174622/175112312/ccs	chr6	-	3993	1	Intergenic	novelGene_3213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGACAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	38541153	38537160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38537200_38541200
m54284U_201203_174622/175178850/ccs	chr15	-	185	1	Intergenic	novelGene_7976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAATTCCCAACAACCACA	NA	False	NA	NA	False	NA	NA	NA	99827630	99827445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99827400_99827600
m54284U_201203_174622/175179049/ccs	chr6	+	2908	8	NIC	ENSMUSG00000052144.9	novel	4874	9	NA	NA	0	384	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	207.510019428618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATTGGAGTACATTTT	9660	False	NA	19	True	AATAAA	-13	NA	100810582	100844967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100841639_100841715_100842034_100842179_100842748_100843045_100843217
m54284U_201203_174622/175179772/ccs	chr13	-	3988	10	NIC	ENSMUSG00000034928.17	novel	3734	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	393	junction_7	120.845171833862	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54841663	54827222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54832302_54841541
m54284U_201203_174622/175243976/ccs	chr11	+	7013	2	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	0	7172	0	0	5prime_fragment	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAACCTG	NA	False	NA	NA	False	NA	NA	NA	60066704	60082851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_60066788_60075921
m54284U_201203_174622/175309460/ccs	chr4	-	2185	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1430	junction_5	127.660132284907	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830710	124812257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_124812824_124813405_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
m54284U_201203_174622/175310625/ccs	chr10	-	2036	14	NNC	ENSMUSG00000019792.9	novel	2359	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	66.0214238135385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATACTCAGTATTT	NA	False	NA	-2	True	AATAAA	-23	NA	30476691	30410710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30475369_30475591_30476585
m54284U_201203_174622/175374494/ccs	chr7	+	3431	8	NNC	ENSMUSG00000058638.15	novel	3591	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	106.478320108186	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGACTATAGCGTGT	NA	False	NA	27	True	NA	NA	NA	12568963	12584504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_12569208_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
m54284U_201203_174622/175375040/ccs	chr2	-	2903	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	51.4823999052103	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915289	179900332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179914892
m54284U_201203_174622/175375128/ccs	chr2	-	3792	14	NNC	ENSMUSG00000027193.13	novel	3736	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	347.427111252326	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATATTAGCATTTATT	NA	False	NA	44	True	NA	NA	NA	94268481	94242026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_94244132_94248549_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
m54284U_201203_174622/175441912/ccs	chr2	-	178	1	Intergenic	novelGene_746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTATCAACACAGAGGTC	5954	False	NA	NA	False	NA	NA	NA	34344666	34344488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34344500_34344700
m54284U_201203_174622/175442654/ccs	chr9	-	7373	27	NIC	ENSMUSG00000046111.19	novel	7188	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_7	34.5778642808496	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTGCTGTCCATCCA	9707	False	NA	0	True	AATAAA	-17	NA	15269084	15228210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235010_15235444_15235588_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
m54284U_201203_174622/175507332/ccs	chr7	+	2981	14	NIC	ENSMUSG00000040189.19	novel	2598	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_6	3.49640559303493	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTTCCTACAAGTGTG	3133	False	NA	12	True	AATAAA	-23	NA	45573639	45598387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_45573811_45573921_45574014_45577947_45578048_45578490_45578681_45585694_45585818_45585979_45586094_45589078_45589147_45591083_45591272_45591482_45592085_45592184_45592354_45596806_45596971_45597046_45597145_45597405_45597485_45597564
m54284U_201203_174622/175572408/ccs	chr7	+	1053	10	NNC	ENSMUSG00000003549.10	novel	1375	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_8	110.932857014647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGTGGCTCTGCGTGTTT	1040	False	NA	15	True	AATAAA	-20	NA	19079031	19090449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089105_19089217_19089287_19090343
m54284U_201203_174622/175572577/ccs	chr7	+	2925	14	NIC	ENSMUSG00000038943.17	novel	3016	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_11	301.176882899235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944212	79966007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962880_79964861
m54284U_201203_174622/175637527/ccs	chr1	+	1316	9	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1206	junction_4	1568.3870247407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201203_174622/175638367/ccs	chr8	+	4529	13	NNC	ENSMUSG00000036779.13	novel	4624	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	33.4849676057116	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTGCCTGCTCATT	NA	False	NA	14	True	AGTAAA	-15	NA	88925840	88986350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_88925942_88926653_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
m54284U_201203_174622/17563867/ccs	chr7	-	1214	9	NIC	ENSMUSG00000025480.6	novel	1460	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_8	52.9526616422631	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTATATTGTGTGTG	NA	False	NA	0	True	AATAAA	-18	NA	140367765	140357141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140357646_140357829_140357912_140358047_140358159_140358221_140358346_140358422_140358490_140358977_140359042_140359249_140359340_140359506_140359562_140367648
m54284U_201203_174622/175639229/ccs	chr6	+	186	1	Intergenic	novelGene_3121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATGCACTGCTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	28412809	28412995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_28412800_28413000
m54284U_201203_174622/17563997/ccs	chr17	-	2633	10	NIC	ENSMUSG00000023944.15	novel	2520	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9221	junction_3	869.284735065148	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCTCTCCTTGTAAC	NA	False	NA	-24	True	AATAAA	-19	NA	45884197	45878700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45879051_45879154_45879489_45879783_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
m54284U_201203_174622/17566395/ccs	chr7	+	2890	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	305.238292527188	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648584_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201203_174622/175703350/ccs	chr2	+	3171	1	FSM	ENSMUSG00000076309.4	ENSMUST00000102354.4	79	1	-2888	-204	-2888	204	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATTTGTGCAAGAGATA	NA	False	NA	23	True	AATAAA	-25	NA	122479834	122483005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_122479800_122483000
m54284U_201203_174622/175704143/ccs	chr15	+	4733	11	NIC	ENSMUSG00000022255.17	novel	6919	12	NA	NA	0	-2087	combination_of_known_junctions	FALSE	canonical	3	78	junction_6	155.039865841015	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACATTCTCTGTGGGA	52	False	NA	25	True	AATAAA	-26	NA	34082864	34143683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
m54284U_201203_174622/175768213/ccs	chr3	-	3508	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	249.895731342514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201203_174622/175768275/ccs	chr11	-	3446	8	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_7	109.403204818185	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470513	61408075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61470392
m54284U_201203_174622/175769739/ccs	chr17	-	2136	14	NNC	ENSMUSG00000024127.16	novel	3255	14	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_13	52.208843251019	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397728	85371956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397672
m54284U_201203_174622/175898769/ccs	chr4	-	2840	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_18	118.660528347274	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980882	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980724
m54284U_201203_174622/175964682/ccs	chrX	-	2355	7	NIC	ENSMUSG00000073139.10	novel	1307	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	74.9288551449529	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGTATTTTATTCT	NA	False	NA	-1	True	AATAAA	-20	NA	69520786	69503358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_69504899_69505796_69505921_69506450_69506628_69508608_69508693_69510759_69510810_69513723_69513901_69520583
m54284U_201203_174622/175965157/ccs	chr16	-	3958	15	NNC	ENSMUSG00000022781.9	novel	5741	15	NA	NA	-8664	-1578	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_14	60.4691268840757	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATTGTATGAATTGAGA	NA	False	NA	-3	True	ATTAAA	-21	NA	31871482	31836685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31871432
m54284U_201203_174622/175965675/ccs	chr15	+	3846	8	NIC	ENSMUSG00000036167.17	novel	3573	10	NA	NA	0	403	combination_of_known_splicesites	FALSE	canonical	3	55	junction_3	53.2326430464831	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTCTCCTCTCGTTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	93296230	93389794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93353331_93353412_93362985_93363127_93386854
m54284U_201203_174622/175966205/ccs	chr17	-	1498	8	NIC	ENSMUSG00000079657.11	novel	1575	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	65	junction_7	8.15412753876019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGTGTCATCTGTGGAA	NA	False	NA	-13	True	AATAAA	-12	NA	24752700	24748038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24748618_24748714_24748945_24749028_24749095_24749364_24749418_24749616_24749684_24749759_24749802_24751185_24751297_24752350
m54284U_201203_174622/176030617/ccs	chr16	-	5561	6	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_5	10.9544511501033	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGTGGTTGTTGGTGT	NA	False	NA	-1	True	AATAAA	-20	NA	43800154	43785395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_43789777_43791761_43791930_43793830_43794141_43794429_43794530_43799270_43799540_43799821
m54284U_201203_174622/176096187/ccs	chr8	+	2424	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	0	174	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	163.936296697833	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAGGGTACATTTGTCT	NA	False	NA	44	True	TTTAAA	-21	NA	69246625	69280327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263227_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
m54284U_201203_174622/176096599/ccs	chr5	+	4099	23	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	247	junction_16	206.64914170786	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/176097540/ccs	chr8	-	1576	5	NIC	ENSMUSG00000031887.14	novel	1689	5	NA	NA	0	-284	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	28.2400424928859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGGAGATGCTGAGGTC	511	False	NA	-7	True	AATAAA	-19	NA	105991235	105985201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_105985928_105986068_105986262_105986341_105986797_105987153_105987313_105991192
m54284U_201203_174622/176161013/ccs	chr12	-	208	1	Intergenic	novelGene_6765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGTAAGTCTGGAGGT	NA	False	NA	NA	False	NA	NA	NA	80972491	80972283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80972300_80972500
m54284U_201203_174622/176161686/ccs	chr15	+	1473	11	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	-443	-368	at_least_one_novel_splicesite	FALSE	canonical	3	147	junction_1	4002.55468919539	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTGCTGTGTAAAGT	NA	False	NA	NA	False	AATAAA	-22	NA	103148415	103153014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_103148545_103148905_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
m54284U_201203_174622/176162185/ccs	chr12	+	174	1	Intergenic	novelGene_6899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGGGTGCACACCTTTAT	NA	False	NA	NA	False	NA	NA	NA	110679605	110679779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_110679600_110679800
m54284U_201203_174622/176226805/ccs	chr3	-	4143	4	NIC	ENSMUSG00000001017.16	novel	3257	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	677	junction_2	390.012250519847	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416805	90406262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_90407415_90409422_90410587_90413414_90414934_90416497
m54284U_201203_174622/17629243/ccs	chrX	-	4072	22	NIC	ENSMUSG00000025665.17	novel	4135	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	33	junction_21	83.6555132550102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTAGTCTTGGTGTAG	NA	False	NA	-7	True	ATTAAA	-30	NA	110372892	110297889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110372546
m54284U_201203_174622/176292902/ccs	chr17	-	1008	4	NNC	ENSMUSG00000057388.10	novel	1219	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	476.277463483443	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACCCTTACTGTGTTGTG	NA	False	NA	-9	True	ATTAAA	-18	NA	13134990	13130235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_13130637_13132625_13132889_13134524_13134712_13134833
m54284U_201203_174622/176293303/ccs	chr9	+	7866	26	NIC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	482	junction_5	62.9853824311641	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	953	False	NA	14	True	AATAAA	-19	NA	103182413	103227627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103205893_103209883_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
m54284U_201203_174622/176293852/ccs	chrX	+	5463	29	NIC	ENSMUSG00000037369.18	novel	5918	29	NA	NA	0	-414	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	44.6303982614943	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTTTGAGTTTTAA	NA	False	NA	10	True	ATTAAA	-23	NA	18028875	18145761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
m54284U_201203_174622/17629466/ccs	chrX	-	205	1	Intergenic	novelGene_9432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTGCTGTGTAGACCAG	4957	False	NA	NA	False	NA	NA	NA	37656737	37656532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_37656500_37656700
m54284U_201203_174622/17630142/ccs	chr17	+	2427	6	NIC	ENSMUSG00000034254.18	novel	2190	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	118	junction_1	5.38887743412299	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGGTTCTCTGCGGCCT	NA	False	NA	13	True	AATAAA	-13	NA	34824834	34832392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34825146_34829418_34829619_34829845_34830424_34830578_34830675_34830764_34830841_34831226
m54284U_201203_174622/17630200/ccs	chr8	+	2732	13	NIC	ENSMUSG00000031808.8	novel	3207	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	50.2843995025628	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCTGTTTTGTATTTT	NA	False	NA	NA	False	NA	NA	NA	72022815	72039352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_72022957_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
m54284U_201203_174622/17631631/ccs	chr11	+	2583	21	NIC	ENSMUSG00000020333.18	novel	5804	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_10	9.20584053739798	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATATATTGTACTTAATT	NA	False	NA	5	True	ATTAAA	-19	NA	54194623	54252361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_54194749_54210977_54211199_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
m54284U_201203_174622/17631877/ccs	chr3	-	3848	18	NIC	ENSMUSG00000027889.18	novel	3586	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	124	junction_17	33.4984377056561	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCATGTGAAGGTGTCT	NA	False	NA	-6	True	AATAAA	-17	NA	107993967	107981377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
m54284U_201203_174622/17632071/ccs	chr9	+	266	1	Intergenic	novelGene_4932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAATTTAAAAAAC	2485	False	NA	NA	False	AATAAA	-10	NA	72540231	72540497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72540200_72540500
m54284U_201203_174622/176423343/ccs	chr18	+	1918	7	NNC	ENSMUSG00000024544.10	novel	2495	6	NA	NA	-222	-888	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	4.61880215351701	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGGTCTTCGTTTCTGCTT	6402	False	NA	NA	False	AGTAAA	-15	NA	68066105	68387734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_68066460_68138755_68138845_68197287_68197758_68239621_68239763_68368725_68368881_68383641_68383696_68387079
m54284U_201203_174622/176423905/ccs	chr2	-	186	1	Intergenic	novelGene_820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCAGCAAGAGTTTGGAT	NA	False	NA	NA	False	NA	NA	NA	66618766	66618580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_66618600_66618800
m54284U_201203_174622/176424898/ccs	chr17	-	2999	6	NIC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-591	intron_retention	FALSE	canonical	3	1943	junction_1	137.277820495519	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCGTGTGAGTACATG	NA	False	NA	-3	True	AGTAAA	-16	NA	47093598	47085423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47091478_47092708_47092818_47093544
m54284U_201203_174622/176488458/ccs	chr9	+	999	5	NIC	ENSMUSG00000033543.18	novel	1199	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_3	356.599477705731	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGAGTAATACTTGATG	NA	False	NA	18	True	AATAAA	-16	NA	69919865	69930020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_69919944_69922573_69922693_69924100_69924474_69926670_69926798_69929718
m54284U_201203_174622/176489364/ccs	chr18	+	1512	10	NIC	ENSMUSG00000024576.15	novel	3204	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	37	junction_9	601.591408035572	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTGTAACTTATTC	482	False	NA	27	True	ATTAAA	-18	NA	61688398	61715189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61715106
m54284U_201203_174622/176554100/ccs	chr8	+	1768	5	NIC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	165.171123384204	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563223	48594700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48593377
m54284U_201203_174622/176554865/ccs	chr14	-	184	1	Intergenic	novelGene_7603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAAAGGGGGTTGTAGG	8734	False	NA	NA	False	NA	NA	NA	122430515	122430331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_122430300_122430500
m54284U_201203_174622/176556080/ccs	chr4	-	5106	13	NIC	ENSMUSG00000037443.14	novel	3893	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	315	junction_4	47.1298442838741	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGTTTCCTAGTGCCTC	NA	False	NA	NA	False	AATAAA	-15	NA	133914423	133857168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
m54284U_201203_174622/176619765/ccs	chr7	-	2118	17	NIC	ENSMUSG00000089832.9	novel	2358	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	85.4033627850801	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	False	NA	-32	True	AATAAA	-13	NA	27055379	27041561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
m54284U_201203_174622/176620367/ccs	chr8	+	1563	5	NNC	ENSMUSG00000005413.9	novel	774	2	NA	NA	163	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	92.3102784092866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAAGTGCATTCATGTC	NA	False	NA	10	True	AATAAA	-19	NA	75820411	75827217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_75820558_75822483_75822605_75823477_75823970_75825393_75825494_75826513
m54284U_201203_174622/176621718/ccs	chr1	-	5194	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	-158	intron_retention	FALSE	canonical	3	480	junction_17	72.5892678986292	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATTAACATCTGAACC	NA	False	NA	0	True	AATAAA	-23	NA	180971769	180920981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
m54284U_201203_174622/176687722/ccs	chr9	+	3279	13	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	518	junction_4	141.37352023	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	5512	False	NA	3	True	AATAAA	-18	NA	35122450	35128310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
m54284U_201203_174622/176751193/ccs	chr13	+	2849	12	NNC	ENSMUSG00000021474.10	novel	2783	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	341.21576509169	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGTCTCTTACTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	54225887	54262361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247571_54247638_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
m54284U_201203_174622/176753252/ccs	chr11	+	1933	5	NIC	ENSMUSG00000020808.4	novel	1513	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	210	junction_4	14.6116391962025	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGTTTTTAGATATCT	NA	False	NA	14	True	AATAAA	-18	NA	71933280	71938196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_71933361_71933842_71934164_71935806_71936601_71937165_71937220_71937512
m54284U_201203_174622/176816758/ccs	chr13	+	1538	11	NIC	ENSMUSG00000041236.9	novel	3199	29	NA	NA	-2639	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	170.978244230077	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATTGTGTTGCAAGC	NA	False	NA	23	True	AATAAA	-22	NA	19026393	19050981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_19026451_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
m54284U_201203_174622/176818544/ccs	chr8	-	1061	11	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_9	1190.40285617937	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321106	84298328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84301106_84301158_84320968
m54284U_201203_174622/176818674/ccs	chr10	-	1510	6	NNC	ENSMUSG00000035478.15	novel	1566	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_1	475.092159480663	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCACTGTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	80235256	80228372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_80229111_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
m54284U_201203_174622/176883227/ccs	chr2	+	1774	10	NIC	ENSMUSG00000027257.14	novel	1859	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	17.8519286920123	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCTTTTGATAGCC	4775	False	NA	20	True	AATAAA	-17	NA	91087182	91095024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_91087272_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
m54284U_201203_174622/17695848/ccs	chr16	+	3557	12	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-325	366	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	37.2933424142936	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGGCCCCATAAGGGT	NA	False	NA	12	True	AATAAA	-22	NA	94370543	94493426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
m54284U_201203_174622/17696365/ccs	chr1	+	188	1	Intergenic	novelGene_186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATGAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	74447259	74447447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74447300_74447400
m54284U_201203_174622/17696804/ccs	chr18	-	4085	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	0	94	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	90.6398519771514	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGCCATGGACTTGAAA	NA	False	NA	46	True	AATAAA	-17	NA	62681766	62637131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648619_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681723
m54284U_201203_174622/17697435/ccs	chr11	+	1452	8	NNC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-809	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_6	991.302132736204	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206682	97219937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218940_97219086_97219307
m54284U_201203_174622/177144234/ccs	chr17	-	4278	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_6	48.0092583663702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123111	47109045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123047
m54284U_201203_174622/177145759/ccs	chr9	+	216	1	Intergenic	novelGene_5089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATGTCAGGCAATGGT	NA	False	NA	NA	False	NA	NA	NA	108416821	108417037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108416800_108417000
m54284U_201203_174622/177146535/ccs	chr3	+	5052	19	NNC	ENSMUSG00000007379.16	novel	3578	14	NA	NA	-515	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	62.5397651276548	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCACAGATCTCTTGGAG	NA	False	NA	NA	False	GATAAA	-16	NA	103009404	103077054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_103009573_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
m54284U_201203_174622/1771899/ccs	chr9	-	7495	27	NIC	ENSMUSG00000032407.15	novel	7630	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	203.484137904403	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAACTTGGTGTGCTCTGTG	8293	False	NA	-3	True	ATTAAA	-17	NA	95393947	95338950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
m54284U_201203_174622/177211183/ccs	chr3	-	4360	1	Antisense	novelGene_ENSMUSG00000027940.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCGAAATCGGTACAGGC	9570	False	NA	NA	False	NA	NA	NA	89999727	89995367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_-_89995400_89999700
m54284U_201203_174622/177211309/ccs	chr4	+	2806	5	NIC	ENSMUSG00000095567.9	novel	2945	18	NA	NA	1507	117	intron_retention	FALSE	canonical	3	1505	junction_2	234.259471526767	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGACCCCCCTCTCTT	NA	False	NA	NA	False	NA	NA	NA	156323182	156327231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156323760_156323846_156324825_156325056_156325959_156326117_156326258_156327022
m54284U_201203_174622/1772273/ccs	chr13	-	955	5	NIC	ENSMUSG00000037960.12	novel	804	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	362	junction_4	11.146748404804	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTGTCGAATGTCTTC	NA	False	NA	-6	True	ATTAAA	-14	NA	49369513	49356425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_49356712_49357193_49357465_49358667_49358822_49361479_49361623_49369412
m54284U_201203_174622/177275847/ccs	chr15	-	2741	19	NNC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	0	338	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	753.850349051741	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATCAAGACCTCTGT	NA	False	NA	-12	True	AATAAA	-11	NA	11399751	11383752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_11384348_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
m54284U_201203_174622/177341335/ccs	chr10	-	2083	4	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_3	157.700841962101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTTGTAGACTGTCT	NA	False	NA	-5	True	AATAAA	-22	NA	88520877	88511133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_88511933_88513361_88514499_88515720_88515818_88520827
m54284U_201203_174622/177341506/ccs	chr6	+	179	1	Intergenic	novelGene_3492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAGTCATAGATGC	NA	False	NA	NA	False	NA	NA	NA	124365453	124365632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_124365500_124365600
m54284U_201203_174622/177342923/ccs	chr2	+	2296	11	NIC	ENSMUSG00000002102.16	novel	1636	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1724	junction_1	118.825460234749	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTCTTTCTCAGCCTCT	NA	False	NA	20	True	AATAAA	-21	NA	90884399	90889779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90888207_90888354_90888501_90889390_90889473_90889598
m54284U_201203_174622/177406825/ccs	chr12	+	189	1	Intergenic	novelGene_6921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAAGTTCTTGTTT	NA	False	NA	NA	False	NA	NA	NA	111529890	111530079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111529900_111530100
m54284U_201203_174622/177407041/ccs	chr4	-	176	1	Intergenic	novelGene_2143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAGAGCAGCACAGA	NA	False	NA	NA	False	NA	NA	NA	129194190	129194014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129194000_129194200
m54284U_201203_174622/177408804/ccs	chr11	+	4012	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	-1200	combination_of_known_splicesites	FALSE	canonical	2	27	junction_18	103.777903745379	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2027	False	NA	26	True	AATAAA	-16	NA	87018013	87110309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
m54284U_201203_174622/177472918/ccs	chr17	+	4416	17	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	1341	junction_7	112.702872634197	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923209	71966026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
m54284U_201203_174622/177473559/ccs	chr12	+	6948	28	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	0	-220	combination_of_known_junctions	FALSE	canonical	1	2	junction_24	11.3298227436232	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACGGAGTTTTATTCAC	NA	False	NA	9	True	AATAAA	-19	NA	25024927	25109476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25101093_25101226_25102795_25102895_25103796_25104034_25106580
m54284U_201203_174622/177537097/ccs	chr6	-	2290	3	Antisense	novelGene_ENSMUSG00000039419.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	15	junction_2	3.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTAGTGTAATTGGATTC	NA	False	NA	-15	True	AGTAAA	-18	NA	47167374	47161135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_47161996_47165802_47167209_47167350
m54284U_201203_174622/177538238/ccs	chr17	-	3388	5	NIC	ENSMUSG00000024097.12	novel	1898	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1956	junction_1	154.627576777236	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80509597_80509634_80510119_80512868_80513276_80513458_80514603
m54284U_201203_174622/177538452/ccs	chr11	-	3292	14	NIC	ENSMUSG00000032633.13	novel	3567	13	NA	NA	103	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_12	104.633086737593	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGAATGTTGAAACACAA	NA	False	NA	-45	True	NA	NA	NA	59700647	59682615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686402_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700190_59700312_59700485
m54284U_201203_174622/177603016/ccs	chr4	+	5248	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	145.296412960016	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/177603277/ccs	chr6	+	8213	29	NIC	ENSMUSG00000030180.16	novel	10944	28	NA	NA	0	2050	combination_of_known_junctions	FALSE	canonical	3	31	junction_28	8.37878759920867	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGCTCTTCTGTACTTAT	NA	False	NA	9	True	AATATA	-17	NA	120341084	120418722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415404_120415487_120415947
m54284U_201203_174622/177605455/ccs	chr5	-	2890	3	NIC	ENSMUSG00000038690.16	novel	607	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	4948	junction_2	246	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTTGCCTGGTGTAGT	8631	False	NA	-10	True	AATAAA	-17	NA	145128338	145120515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_145120678_145121341_145124044_145128312
m54284U_201203_174622/17760547/ccs	chr4	+	3098	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	533.493960186576	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4706	False	NA	NA	False	AATAAA	-17	NA	135583442	135593126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135591039
m54284U_201203_174622/17761281/ccs	chr3	-	3272	32	NIC	ENSMUSG00000027855.14	novel	3437	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	14.4403037547212	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTCTCATTGATTTT	NA	False	NA	-2	True	ATTAAA	-14	NA	102843416	102725814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_102726279_102726371_102726459_102727854_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102783618_102783682_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102841520_102841578_102841922_102841967_102842124_102842198_102842859_102842982_102843301
m54284U_201203_174622/17761811/ccs	chr12	-	514	1	FSM	ENSMUSG00000066553.6	ENSMUST00000140065.2	342	1	-54	-118	-54	118	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTGATTTGTTTAT	NA	False	NA	NA	False	NA	NA	NA	24689063	24688549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_24688500_24689100
m54284U_201203_174622/177669238/ccs	chr5	-	188	1	Intergenic	novelGene_2753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACCAGAGAACTCCTAA	3161	False	NA	NA	False	NA	NA	NA	108657641	108657453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108657500_108657600
m54284U_201203_174622/177670780/ccs	chr14	+	5445	9	NIC	ENSMUSG00000021962.10	novel	5576	10	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_7	53.7655500762338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAATTGTGTTTTTTATT	NA	False	NA	NA	False	AATAAA	-34	NA	30201633	30249020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30244684_30244904_30245182
m54284U_201203_174622/177733711/ccs	chr7	-	5237	14	NIC	ENSMUSG00000066571.14	novel	6224	14	NA	NA	0	-109	combination_of_known_junctions	FALSE	canonical	3	60	junction_13	26.7307415605834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAATGGTTTATTCTTT	9808	False	NA	NA	False	ATTAAA	-24	NA	34012976	33937113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012916
m54284U_201203_174622/177733902/ccs	chr6	+	2678	14	NIC	ENSMUSG00000052337.16	novel	2728	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	424.422768463866	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201203_174622/177736180/ccs	chr19	-	4494	30	NIC	ENSMUSG00000024960.10	novel	4257	31	NA	NA	0	0	intron_retention	FALSE	canonical	3	577	junction_23	51.4844099788277	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTACAGTGTAGTTT	4311	False	NA	-8	True	AATAAA	-16	NA	6947182	6931080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6931668_6931748_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
m54284U_201203_174622/177800109/ccs	chr9	-	3801	18	NIC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-136	intron_retention	FALSE	canonical	3	299	junction_6	61.6594621559125	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGGTTTGT	NA	False	NA	-13	True	TATAAA	-17	NA	114469252	114415169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
m54284U_201203_174622/177866819/ccs	chrX	+	2305	5	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	26.9664142963057	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618711	133622659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_133618800_133619474_133619568_133619668_133619858_133620375_133620475_133620823
m54284U_201203_174622/177930301/ccs	chr6	+	1937	9	NNC	ENSMUSG00000041477.15	novel	1748	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	15.8981130955846	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTCTGGGGGTTTTGTT	NA	False	NA	9	True	AGTAAA	-16	NA	119152248	119197167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194694_119194941_119196963
m54284U_201203_174622/177997586/ccs	chr11	+	3704	3	NIC	ENSMUSG00000044950.8	novel	1814	4	NA	NA	0	930	combination_of_known_junctions	FALSE	canonical	3	62	junction_2	21	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAACTGTTTTACTGT	NA	False	NA	NA	False	AATAAA	-28	NA	43572884	43613248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_43573444_43595360_43596305_43611047
m54284U_201203_174622/178061434/ccs	chr9	+	2596	13	NIC	ENSMUSG00000032078.18	novel	2984	14	NA	NA	0	117	intron_retention	FALSE	canonical	3	619	junction_8	53.3423820448827	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCGCCTCTGCGTTCAT	NA	False	NA	11	True	ATTAAA	-18	NA	46184490	46192899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
m54284U_201203_174622/178061768/ccs	chr19	+	3398	17	NIC	ENSMUSG00000071646.10	novel	3135	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	728	junction_3	73.4630008916053	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	3469	False	NA	20	True	AATAAA	-24	NA	8919238	8929667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
m54284U_201203_174622/178063721/ccs	chr3	+	1498	10	NNC	ENSMUSG00000027774.17	novel	924	7	NA	NA	-6543	280	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	155.305433832103	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAGGGAAGAAGAGAATA	NA	False	NA	NA	False	NA	NA	NA	67357268	67382417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_67357498_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
m54284U_201203_174622/178063855/ccs	chr11	+	1824	15	NIC	ENSMUSG00000025142.19	novel	1690	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	887	junction_3	60.5904619691305	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	False	NA	13	True	AATAAA	-17	NA	120563881	120600270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120600073_120600169
m54284U_201203_174622/178127164/ccs	chr10	+	4088	26	NIC	ENSMUSG00000020064.10	novel	3914	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_15	92.3267761811274	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTTTCTATGGTTG	NA	False	NA	17	True	AATAAA	-31	NA	63079607	63153657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63126958_63127063_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
m54284U_201203_174622/178128230/ccs	chr12	-	192	1	Intergenic	novelGene_6889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCATGCCTGTGTTAGG	NA	False	NA	NA	False	NA	NA	NA	108740206	108740014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_108740000_108740200
m54284U_201203_174622/178192831/ccs	chr18	-	194	1	Intergenic	novelGene_8985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	64776005	64775811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_64775800_64776000
m54284U_201203_174622/178192989/ccs	chr7	+	2246	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	327.388554024301	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43896248_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/178258915/ccs	chr4	-	6675	9	NNC	ENSMUSG00000057637.14	novel	617	6	NA	NA	0	-20078	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_6	9.44722181384559	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGGACTGCATTTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	142939279	142854038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_142855545_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
m54284U_201203_174622/178259894/ccs	chr3	+	6657	39	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	18.0509627892179	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6168	False	NA	12	True	AAGAAA	-13	NA	87524881	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
m54284U_201203_174622/178259975/ccs	chr11	+	2132	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	-59	0	-59	0	intron_retention	FALSE	canonical	3	238	junction_1	261.317003635219	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1575	False	NA	2	True	ATTAAA	-19	NA	120675281	120679928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
m54284U_201203_174622/17826334/ccs	chr10	-	3551	10	NIC	ENSMUSG00000062075.14	novel	3370	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_6	24.8108896840396	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3111	False	NA	-1	True	AATAAA	-17	NA	80754079	80737197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
m54284U_201203_174622/17827805/ccs	chr9	+	3817	11	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	54.2867387121385	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACTGTGATTTGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	13739030	13757837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13742929_13743064_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
m54284U_201203_174622/17827879/ccs	chr8	+	3248	23	NIC	ENSMUSG00000005142.11	novel	3822	24	NA	NA	0	-687	intron_retention	FALSE	canonical	3	158	junction_7	31.7728573283851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGCACTATCTTTTCT	NA	False	NA	23	True	ATTAAA	-25	NA	85809898	85824224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
m54284U_201203_174622/178323483/ccs	chrX	+	2726	6	Intergenic	novelGene_9738	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_2	32.6030673403593	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCGGCGTCGGCTCCTC	381	False	NA	2	True	AATAAA	-16	NA	169098191	169105546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_169098429_169099553_169099673_169099929_169100868_169101639_169101789_169102375_169102617_169104504
m54284U_201203_174622/178456031/ccs	chr11	-	3130	17	NIC	ENSMUSG00000020918.15	novel	3043	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	387	junction_11	56.9428167111533	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	6779	False	NA	-1	True	AATAAA	-18	NA	100603291	100595571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
m54284U_201203_174622/178521090/ccs	chr1	+	1241	8	NIC	ENSMUSG00000050122.20	novel	4717	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	16.9440857179231	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCAGATTTCTCCCTCA	NA	False	NA	5	True	AATAAA	-22	NA	37139748	37180417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_37139908_37153541_37153681_37154738_37154871_37163031_37163131_37167964_37168142_37174515_37174647_37176810_37176969_37180171
m54284U_201203_174622/178521493/ccs	chr17	-	186	1	Intergenic	novelGene_8437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGCAGAAAGGAAACTAT	3543	False	NA	NA	False	NA	NA	NA	26953377	26953191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26953200_26953400
m54284U_201203_174622/178586218/ccs	chr17	+	2282	5	NNC	ENSMUSG00000003198.11	novel	705	4	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	13.1624465810882	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATATTTATGTGTCT	NA	False	NA	NA	False	AATAAA	-13	NA	56199414	56205928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56199633_56199757_56199861_56202820_56202948_56203140_56203202_56204155
m54284U_201203_174622/178653386/ccs	chr18	+	767	5	NIC	ENSMUSG00000057130.13	novel	4078	4	NA	NA	-17	188	combination_of_known_splicesites	FALSE	canonical	3	288	junction_3	1074.60606154069	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGATCTGCTGTGCTTA	NA	False	NA	8	True	AATAAA	-16	NA	80250060	80265741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_80250117_80250368_80250559_80253276_80253346_80261918_80262023_80265393
m54284U_201203_174622/178719215/ccs	chr13	+	172	1	Intergenic	novelGene_7165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTTTGTAAGCACAT	NA	False	NA	NA	False	NA	NA	NA	64458894	64459066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_64458900_64459100
m54284U_201203_174622/178784387/ccs	chr17	+	5142	22	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	112.735940543597	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658359	83787790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83735428_83735455_83735644_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
m54284U_201203_174622/178848392/ccs	chr14	-	1336	8	NIC	ENSMUSG00000060373.16	novel	1301	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	633	junction_2	1178.64943464794	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
m54284U_201203_174622/178849042/ccs	chr9	+	3738	11	NNC	ENSMUSG00000037808.14	novel	3760	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	54.6652540467892	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGACTGTGATTTGGAT	NA	False	NA	NA	False	AATAAA	-35	NA	13739030	13757837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13747954_13748013_13748135_13748269_13750935_13751038_13755324
m54284U_201203_174622/17892672/ccs	chr17	+	4459	24	NIC	ENSMUSG00000035842.11	novel	4480	25	NA	NA	0	67	intron_retention	FALSE	canonical	3	152	junction_9	15.9206444189472	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGTGTTTTTCATTTTT	NA	False	NA	9	True	NA	NA	NA	66430565	66458451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66457048_66457325_66457405_66457568_66457724_66457797
m54284U_201203_174622/17892962/ccs	chr18	-	3323	14	NIC	ENSMUSG00000024587.11	novel	2687	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	2259	junction_13	815.033037410758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACACTTTGCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	64649599	64632728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
m54284U_201203_174622/17893390/ccs	chr2	+	1638	10	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	764.283897869901	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118574_130119395_130119545_130119768_130119891_130120075_130120211_130120816
m54284U_201203_174622/17894226/ccs	chr16	-	1524	7	NIC	ENSMUSG00000022544.15	novel	2170	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	270	junction_1	79.2199820471802	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGACTGTCCTGTCAGAC	NA	False	NA	-5	True	AATAAA	-17	NA	5073847	5062742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_5063250_5065316_5065464_5066428_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
m54284U_201203_174622/178979317/ccs	chr11	-	190	1	Intergenic	novelGene_6510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAAACAGGTGCTGATTC	NA	False	NA	NA	False	NA	NA	NA	120365791	120365601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_120365600_120365800
m54284U_201203_174622/178980276/ccs	chr2	+	3569	18	NNC	ENSMUSG00000068040.11	novel	3896	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_17	128.519517723909	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGGTGCGGATTGAAG	NA	False	NA	41	True	AATAAA	-30	NA	153003467	153052386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050608
m54284U_201203_174622/179046064/ccs	chr19	+	3094	22	NNC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	0	-2771	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_13	397.410895045838	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919358	38956724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943137_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
m54284U_201203_174622/179046274/ccs	chr9	+	5137	20	NIC	ENSMUSG00000032280.17	novel	2304	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	54.7015574532539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTGTTTTAATTGCCT	NA	False	NA	46	True	AAAAAG	-11	NA	61279664	61325779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_61280744_61281234_61281336_61281796_61281861_61282810_61282856_61300484_61300548_61301889_61301965_61309137_61309340_61310733_61310751_61314635_61314756_61315561_61315613_61316047_61316201_61316556_61316699_61317217_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
m54284U_201203_174622/179110420/ccs	chr7	-	3853	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	137	junction_14	287.428781349095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGGACTTTTACTTTTTA	9496	False	NA	-78	True	NA	NA	NA	126102527	126090957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201203_174622/179177765/ccs	chr19	+	2490	13	NIC	ENSMUSG00000015176.12	novel	3634	13	NA	NA	0	76	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	263.476899156053	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTAATAATTTTCCCTA	28	False	NA	31	True	ATTAAA	-36	NA	46064451	46072976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
m54284U_201203_174622/179307708/ccs	chr1	-	5550	40	NIC	ENSMUSG00000037470.15	novel	9033	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_20	72.0100347306307	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGTGCTTTTTCTTC	NA	False	NA	-5	True	NA	NA	NA	36283386	36182566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
m54284U_201203_174622/179307799/ccs	chr10	+	3953	10	NIC	ENSMUSG00000020089.9	novel	1364	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3777	junction_3	131.285477274563	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTAGGATAGTTTCT	2121	False	NA	15	True	AATAAA	-16	NA	61484399	61509947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
m54284U_201203_174622/179309127/ccs	chr3	+	3027	17	NIC	ENSMUSG00000058388.15	novel	3006	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_5	25.1939352821269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTCTAGGCTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	103875683	103914806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_103876104_103876370_103876447_103889201_103889272_103890261_103890421_103893068_103893226_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
m54284U_201203_174622/179373163/ccs	chr16	-	3446	19	NIC	ENSMUSG00000012114.18	novel	3410	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_18	83.3667525581917	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	False	NA	-23	True	AATAAA	-16	NA	17540772	17469084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17524262_17524348_17540619
m54284U_201203_174622/179438620/ccs	chr17	+	1749	6	NIC	ENSMUSG00000046711.17	novel	1717	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_1	2099.71097058619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27775558	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_27775686_27775925_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781414
m54284U_201203_174622/179438758/ccs	chr3	-	3057	1	Antisense	novelGene_ENSMUSG00000039988.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCTGGGTCTATTAA	NA	False	NA	NA	False	NA	NA	NA	157707204	157704147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_-_157704100_157707200
m54284U_201203_174622/179438925/ccs	chr16	+	182	1	Intergenic	novelGene_8238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATTTAAAAAGTCAGCT	NA	False	NA	NA	False	NA	NA	NA	35240250	35240432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_35240200_35240400
m54284U_201203_174622/179439420/ccs	chrX	-	3830	24	NIC	ENSMUSG00000025665.17	novel	4170	24	NA	NA	0	-396	combination_of_known_junctions	FALSE	canonical	3	110	junction_23	71.6464486948656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCAGTGTGTAATGTGT	NA	False	NA	NA	False	AATAAA	-34	NA	110373152	110298285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_110299609_110300783_110300916_110308277_110308396_110309904_110309967_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927_110355988_110359988_110360052_110372546_110372799_110372967
m54284U_201203_174622/179503871/ccs	chr2	-	2114	6	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_4	482.72327476516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	32602796	32597449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32598302_32599478_32599957_32600054_32600222_32600488_32600804_32602042_32602125_32602576
m54284U_201203_174622/179505392/ccs	chr5	+	4293	23	NNC	ENSMUSG00000039000.9	novel	5048	23	NA	NA	0	-751	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	142.175685754755	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCGGGCTGCGTCTCTCC	NA	False	NA	24	True	ATTAAA	-16	NA	29774239	29880339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_29774579_29792272_29792327_29794889_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
m54284U_201203_174622/179505972/ccs	chr15	+	1862	13	NNC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_12	288.373889247969	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832704	80853320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852870
m54284U_201203_174622/179568860/ccs	chr4	+	4092	18	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	25.8910413224583	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659457	107731096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
m54284U_201203_174622/179569716/ccs	chr5	-	2766	7	NIC	ENSMUSG00000028959.15	novel	1893	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	73	junction_3	397.220516701855	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650236	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646260_24646333_24646822_24646921_24647099_24647179_24647394_24648001_24648142_24648274_24648455_24648892
m54284U_201203_174622/17957438/ccs	chr2	+	5276	1	ISM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	7924	0	7924	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTTGCTTTTAA	NA	False	NA	24	True	AATAAA	-30	NA	119432707	119437983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_119432700_119438000
m54284U_201203_174622/17959675/ccs	chr11	+	3497	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_22	177.134713134445	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746291
m54284U_201203_174622/179634511/ccs	chr9	+	3533	6	NIC	ENSMUSG00000032599.13	novel	1708	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_2	39.7894458368045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTGCTGCTGTCGTTC	NA	False	NA	14	True	AATACA	-18	NA	108661020	108683531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108661070_108673262_108675378_108675469_108675693_108676440_108676617_108681740_108681917_108682737
m54284U_201203_174622/179636032/ccs	chr7	+	5332	17	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	350	junction_7	56.8714284592888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTCCAGGCCATCTG	NA	False	NA	16	True	AATAAA	-16	NA	16550241	16574856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
m54284U_201203_174622/179636461/ccs	chr9	-	4395	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	-457	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	73.562863579113	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2246	False	NA	-1	True	AATAAA	-15	NA	70411007	70333168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
m54284U_201203_174622/179700599/ccs	chr18	+	3536	12	NIC	ENSMUSG00000024581.14	novel	3567	12	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	1	9	junction_3	68.5344818803759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAGTTTTATTTGCT	NA	False	NA	6	True	AATAAA	-18	NA	63110946	63132521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_63111096_63113536_63113605_63115689_63115775_63116430_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
m54284U_201203_174622/179701550/ccs	chr6	+	208	1	Intergenic	novelGene_3256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGTCTGAGGACCATAAGA	NA	False	NA	NA	False	NA	NA	NA	48056709	48056917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_48056700_48056900
m54284U_201203_174622/179702457/ccs	chr15	+	1965	3	ISM	ENSMUSG00000022303.10	ENSMUST00000022913.6	1997	4	8244	4	8232	0	3prime_fragment	FALSE	canonical	3	14	junction_1	5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGCCTTGATCATGTGA	NA	False	NA	6	True	NA	NA	NA	39617571	39624330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_39618622_39622709_39623019_39623724
m54284U_201203_174622/179765709/ccs	chr5	-	7484	12	NIC	ENSMUSG00000051339.11	novel	10238	13	NA	NA	0	-2607	combination_of_known_splicesites	FALSE	canonical	2	2	junction_11	7.42343842276131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTTGAGTCTAACTTG	NA	False	NA	NA	False	NA	NA	NA	113369102	113236795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113369076
m54284U_201203_174622/179767048/ccs	chr4	+	5478	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_7	86.2317210904562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-25	True	NA	19	True	AGTAAA	-16	NA	11558921	11615805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11612439_11612617_11612819_11615442
m54284U_201203_174622/179831190/ccs	chr3	-	2984	23	NNC	ENSMUSG00000028089.6	novel	3008	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	68.3504732250088	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTATGTTGCTTTTTT	NA	False	NA	-8	True	AATAGA	-13	NA	97517519	97468057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
m54284U_201203_174622/179832806/ccs	chr8	+	368	2	ISM	ENSMUSG00000003812.14	ENSMUST00000128400.2	4073	7	4670	230	0	-230	3prime_fragment	FALSE	canonical	3	74	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAATAAAAACTAAAAC	NA	False	NA	NA	False	NA	NA	NA	85640019	85640920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_85640158_85640690
m54284U_201203_174622/179833141/ccs	chr1	-	3205	13	NIC	ENSMUSG00000026098.14	novel	3054	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_12	39.2778563569857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTCACGTCCAACC	6055	False	NA	NA	False	AATAAA	-18	NA	53336174	53228345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53335890
m54284U_201203_174622/179897927/ccs	chrX	-	3323	11	NIC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	11	junction_9	279.735392826864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94999480_94999607_95000263
m54284U_201203_174622/179898859/ccs	chr5	+	4381	13	NIC	ENSMUSG00000051950.11	novel	4570	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	161.147878946292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGGCTTCTGTTGTCT	NA	False	NA	14	True	AATAAA	-22	NA	149601694	149686064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
m54284U_201203_174622/179962004/ccs	chrX	-	189	1	Intergenic	novelGene_9441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAGACGAAAGT	NA	False	NA	NA	False	NA	NA	NA	41220204	41220015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_41220000_41220200
m54284U_201203_174622/179963047/ccs	chr1	-	1293	8	NNC	ENSMUSG00000026162.9	novel	1586	8	NA	NA	0	-215	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	8.89622712968015	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTTGAGGTTACCTGT	NA	False	NA	-8	True	AATAAA	-17	NA	75101844	75006512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097397_75101779
m54284U_201203_174622/179964075/ccs	chr17	+	5691	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15642	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.27454533064	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004421	29057518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29004515_29016706_29016813_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
m54284U_201203_174622/179964434/ccs	chr17	+	5283	22	NIC	ENSMUSG00000032624.17	novel	5441	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	107.575402021937	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTTTGCCTTTGTTT	NA	False	NA	16	True	GATAAA	-19	NA	83658359	83787790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83735428_83735455_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
m54284U_201203_174622/180028000/ccs	chr17	+	2178	15	NIC	ENSMUSG00000024059.11	novel	3357	14	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	16.6679761390347	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCACTGTGTGTGTCTTCT	NA	False	NA	NA	False	ATTAAA	-24	NA	72089675	72157159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_72089846_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886
m54284U_201203_174622/180028092/ccs	chr4	+	1155	7	NIC	ENSMUSG00000006392.17	novel	1134	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_3	261.843093389067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCATTCCTTGTCCTA	NA	False	NA	32	True	NA	NA	NA	118266562	118272308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_118266584_118268081_118268201_118268894_118269050_118269548_118269690_118269860_118269943_118270823_118271073_118271920
m54284U_201203_174622/180029314/ccs	chr16	-	2616	4	NIC	ENSMUSG00000033157.18	novel	2848	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	111.547697819762	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATGGTGAGTCCTGTGC	NA	False	NA	-5	True	NA	NA	NA	45563270	45550087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_45552323_45557255_45557394_45557886_45557999_45563139
m54284U_201203_174622/180093542/ccs	chr10	+	180	1	Antisense	novelGene_ENSMUSG00000112509.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAGAGATTTGAA	310	False	NA	NA	False	NA	NA	NA	69208861	69209041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_69208900_69209000
m54284U_201203_174622/180093690/ccs	chr17	-	2385	9	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	890.147003309004	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGATATTCAGTCTTTGG	NA	False	NA	-11	True	AATAAA	-23	NA	80514733	80507508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
m54284U_201203_174622/180160498/ccs	chr4	-	635	8	NIC	ENSMUSG00000028549.18	novel	2806	9	NA	NA	0	-54	combination_of_known_splicesites	FALSE	canonical	3	12	junction_6	80.1386553520375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTATATGCCTGTATG	NA	False	NA	4	True	AATAAA	-35	NA	99717371	99655621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99702294_99702338_99717319
m54284U_201203_174622/18023194/ccs	chr12	+	178	1	Intergenic	novelGene_6930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	111737605	111737783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111737600_111737800
m54284U_201203_174622/18025121/ccs	chr17	+	3676	24	NIC	ENSMUSG00000024019.19	novel	2815	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	87.7941612227232	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29879594	29922333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904882_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
m54284U_201203_174622/180290610/ccs	chr7	-	5381	11	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-481	0	intron_retention	FALSE	canonical	0	0	junction_10	42.7906531850123	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTGTCAAGCCATTT	NA	False	NA	-2	True	AATAAA	-29	NA	140908084	140877092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140877530_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
m54284U_201203_174622/180290641/ccs	chr3	+	2665	11	NIC	ENSMUSG00000001016.13	novel	1702	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1252	junction_8	71.3178799460556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTTTTGGTTTTATTTT	NA	False	NA	13	True	ATTAAA	-13	NA	90383463	90395270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90394405_90394533_90394625_90394765
m54284U_201203_174622/180290730/ccs	chr3	-	5478	5	NIC	ENSMUSG00000027881.15	novel	3026	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	234	junction_3	120.261174117003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTGGGTGTTGGTTTCC	6850	False	NA	-9	True	AATAAA	-18	NA	108819043	108810122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_108812079_108812426_108815164_108815247_108815400_108815651_108815721_108818479
m54284U_201203_174622/180355695/ccs	chr5	+	1800	3	NIC	ENSMUSG00000029390.14	novel	2074	4	NA	NA	81	0	intron_retention	FALSE	canonical	3	12	junction_1	1774.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTTTTATATTAATG	NA	False	NA	12	True	AATAAA	-22	NA	124678838	124688569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_124679105_124684958_124685067_124687143
m54284U_201203_174622/180356964/ccs	chr14	-	1099	9	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5049	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	114.076728564594	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607968	59586180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_59586501_59586670_59586838_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
m54284U_201203_174622/180421967/ccs	chr3	+	2226	16	NIC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	754	junction_14	169.31149465474	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4849	False	NA	20	True	ATTAAA	-23	NA	34074246	34123494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
m54284U_201203_174622/180422100/ccs	chr2	-	4155	14	NIC	ENSMUSG00000015087.15	novel	3230	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	286	junction_8	24.2123250926162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTGTGTGACTCTTTT	3274	False	NA	-6	True	CATAAA	-15	NA	25498477	25473029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
m54284U_201203_174622/180423011/ccs	chr13	-	3268	11	NIC	ENSMUSG00000021495.11	novel	4341	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_10	52.3645872704063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTAGTATGATGGTGAT	NA	False	NA	-7	True	GATAAA	-16	NA	55718933	55687131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55696930_55697171_55698036_55698221_55700774_55701163_55702029_55702262_55703795_55704039_55712332_55712394_55718587
m54284U_201203_174622/180486356/ccs	chr17	-	2329	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	663.597631344877	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5740	False	NA	-5	True	AATAAA	-16	NA	33904393	33865209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
m54284U_201203_174622/180487154/ccs	chr12	+	186	1	Intergenic	novelGene_6923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGCAAATAATGC	NA	False	NA	NA	False	NA	NA	NA	111573502	111573688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111573500_111573700
m54284U_201203_174622/180488971/ccs	chr9	+	3487	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	185	junction_19	149.780670673753	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5879	False	NA	20	True	AATAAA	-30	NA	21336240	21418436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
m54284U_201203_174622/180552681/ccs	chr3	+	4887	11	NIC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	344	junction_7	26.8767557566013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATGTGCATTGTT	-10	True	NA	16	True	AATAAA	-16	NA	88593120	88620231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607822_88616086_88617250_88618067
m54284U_201203_174622/180552683/ccs	chr13	-	1055	7	NIC	ENSMUSG00000021391.11	novel	1144	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	68.711959172573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTGCTTTGTACAGTT	NA	False	NA	-4	True	AATAAA	-21	NA	49806261	49617498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49803596_49803776_49806058
m54284U_201203_174622/180553695/ccs	chr6	+	2044	10	NNC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	226.77742392046	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023287	113045234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_113023335_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
m54284U_201203_174622/18089247/ccs	chr3	+	2938	10	NIC	ENSMUSG00000001419.18	novel	5401	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_9	42.4185494015688	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGAGATTCTTCTGCT	6538	False	NA	22	True	NA	NA	NA	88049678	88077237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075938
m54284U_201203_174622/18089903/ccs	chr5	-	3498	20	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_17	470.122333345534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559841	149540309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149555756_149555876_149557294_149557353_149559434_149559625_149559784
m54284U_201203_174622/18090089/ccs	chr9	-	179	1	Intergenic	novelGene_4880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	65238473	65238294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65238300_65238500
m54284U_201203_174622/18090281/ccs	chr4	+	204	1	Intergenic	novelGene_2333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAACAGCAGGAAGC	5154	False	NA	NA	False	NA	NA	NA	145590354	145590558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_145590400_145590600
m54284U_201203_174622/18153524/ccs	chr10	+	4726	21	NIC	ENSMUSG00000035311.17	novel	5390	21	NA	NA	0	-567	intron_retention	FALSE	canonical	2	9	junction_12	52.1003598835939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTCAAATAGTCTT	NA	False	NA	8	True	AGTAAA	-17	NA	88215087	88282615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268998_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
m54284U_201203_174622/18154847/ccs	chr11	-	3305	9	NIC	ENSMUSG00000025384.16	novel	3193	10	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	26.8141753555838	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTGTGTTGTGCTCTG	NA	False	NA	-3	True	NA	NA	NA	120269590	120260387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264087_120264707_120265478_120266242_120266400_120267531_120268488_120269153
m54284U_201203_174622/18155053/ccs	chr7	-	4023	7	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	295.165302086061	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATATAGTCTTTTGAAT	NA	False	NA	-17	True	AATAAA	-16	NA	118454907	118441444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_118442787_118442883_118442976_118443923_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
m54284U_201203_174622/18220118/ccs	chr11	-	4829	21	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	-57	978	intron_retention	FALSE	canonical	3	682	junction_20	134.914889838001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTTCTGTCCCTTTC	NA	False	NA	-5	True	GATAAA	-19	NA	97078764	97052357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97053508_97054178_97054341_97054739_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
m54284U_201203_174622/18220661/ccs	chr14	+	3041	11	NIC	ENSMUSG00000021981.11	novel	3037	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	93.0002150535148	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGGTCTCATTCCTCT	NA	False	NA	5	True	AATAAA	-12	NA	59678429	59786352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_59678472_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
m54284U_201203_174622/18221427/ccs	chr4	+	2258	10	NIC	ENSMUSG00000028249.16	novel	2086	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	182.74336048806	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGTCTGTCTGTGCCTG	-5	True	NA	13	True	ATTAAA	-18	NA	6365676	6395655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_6365760_6367639_6367809_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
m54284U_201203_174622/18285140/ccs	chr19	-	5240	24	NIC	ENSMUSG00000024943.10	novel	3448	24	NA	NA	0	-477	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTTAAAAATATTTTTAAT	NA	False	NA	-11	True	AATAAA	-16	NA	23251261	23184291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
m54284U_201203_174622/18286096/ccs	chr2	+	3958	20	NIC	ENSMUSG00000027478.16	novel	4015	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_9	28.3100170206927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491373	153529650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
m54284U_201203_174622/18352690/ccs	chr6	+	4450	13	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_6	51.9548415025545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTAAACTTCTACA	9744	False	NA	22	True	AATAAA	-24	NA	86381263	86409167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
m54284U_201203_174622/1836410/ccs	chr1	+	2452	15	NIC	ENSMUSG00000053286.12	novel	2749	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	47.2939138337512	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGACTGGGCTCGCGT	NA	False	NA	15	True	AATAAA	-16	NA	151304417	151333912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151304682_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
m54284U_201203_174622/1836702/ccs	chr11	-	2560	14	NNC	ENSMUSG00000020523.15	novel	2557	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	66.0623696698092	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCGTGGTATTTAATAGC	NA	False	NA	NA	False	AATAAA	-21	NA	57409443	57373818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405118_57409398
m54284U_201203_174622/1836813/ccs	chrX	+	1558	3	NIC	ENSMUSG00000087193.8	novel	1449	4	NA	NA	0	180	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	48	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTTGCCATGATT	7727	False	NA	NA	False	ATTAAA	-27	NA	7915486	7939378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7915823_7936874_7937304_7938585
m54284U_201203_174622/1837517/ccs	chr7	-	3171	6	NIC	ENSMUSG00000025465.14	novel	1557	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1613	junction_2	102.659826611971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTTTTTAACT	NA	False	NA	-1	True	NA	NA	NA	139696328	139685622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139692460_139692848_139693047_139696219
m54284U_201203_174622/1837703/ccs	chr17	+	2622	18	NNC	ENSMUSG00000040312.15	novel	2656	18	NA	NA	-75	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	28.0148255362583	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTGAGAGACTGCGA	4357	False	NA	20	True	AATAAA	-22	NA	35827921	35841902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35828009_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
m54284U_201203_174622/18415733/ccs	chr19	+	3854	9	NNC	ENSMUSG00000024976.15	novel	3965	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	220	junction_1	61.2775448267961	536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTGTGGTGT	3925	False	NA	21	True	TATAAA	-24	NA	53933303	54021562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_53933327_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
m54284U_201203_174622/18416754/ccs	chr2	-	185	1	Intergenic	novelGene_923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAGGACAGTCAGAGCT	7959	False	NA	NA	False	NA	NA	NA	91055161	91054976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91055000_91055200
m54284U_201203_174622/18416928/ccs	chr18	+	3661	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	144.918748914632	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	12	True	NA	NA	False	AATAAA	-22	NA	7869196	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
m54284U_201203_174622/18417757/ccs	chr14	+	4237	5	NNC	ENSMUSG00000021747.13	novel	2681	16	NA	NA	0	-119290	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	70.9977992616673	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCTGCACCTTCT	NA	False	NA	NA	False	AATACA	-14	NA	13803532	13848062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13844345
m54284U_201203_174622/18481725/ccs	chr10	+	6436	29	NNC	ENSMUSG00000001150.8	novel	6427	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	64.866739378136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCGCCTTAGTTTTATGA	NA	False	NA	12	True	AATAAA	-18	NA	76304760	76351691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325420_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
m54284U_201203_174622/18547593/ccs	chr16	-	1275	8	NNC	ENSMUSG00000035578.17	novel	5618	11	NA	NA	6392	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_7	7.43406390357582	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCACCTAGCATCATGTG	6112	False	NA	2	True	ATTAAA	-29	NA	32863848	32836989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32863699
m54284U_201203_174622/18547817/ccs	chr9	-	4133	18	NNC	ENSMUSG00000064145.13	novel	3924	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_17	307.897446189867	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCCTGTGGAGTCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	108526585	108480145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108506487_108506534_108521224_108521565_108522131_108522194_108523130_108523296_108526427
m54284U_201203_174622/18614409/ccs	chr11	+	4076	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-4334	intron_retention	FALSE	canonical	3	6361	junction_6	596.652528696561	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCAAAGTATGTGGGG	NA	False	NA	31	True	AATAAA	-18	NA	55360543	55391330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55376451_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
m54284U_201203_174622/1867/ccs	chr7	-	4505	25	NNC	ENSMUSG00000038260.11	novel	4234	25	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	30.0187152271527	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCTTGGCTCCTGTGGA	3190	False	NA	-2	True	AATAAA	-23	NA	44983204	44952773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_44953572_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
m54284U_201203_174622/18677996/ccs	chr7	+	2819	9	NIC	ENSMUSG00000030523.19	novel	1992	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	724	junction_4	67.9014681358216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTGAGTTTTCAGAC	NA	False	NA	26	True	ATTAAA	-23	NA	63835206	63861175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_63835372_63847024_63847105_63848910_63849107_63851634_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585
m54284U_201203_174622/18678048/ccs	chr9	+	178	1	Intergenic	novelGene_4900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTATTAAATAAATAATA	NA	False	NA	NA	False	NA	NA	NA	66744989	66745167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_66745000_66745200
m54284U_201203_174622/18678650/ccs	chr8	+	4820	5	NNC	ENSMUSG00000058748.10	novel	2364	4	NA	NA	0	2338	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	75.6405975650642	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTGCTTGGATTTCA	NA	False	NA	NA	False	NA	NA	NA	4663166	4682569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_4663279_4674903_4675022_4675839_4675967_4676163_4676225_4678167
m54284U_201203_174622/18679320/ccs	chr5	+	3345	14	NIC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_5	24.0315374643282	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690777	140705134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698657_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
m54284U_201203_174622/18680415/ccs	chr7	+	4425	5	NIC	ENSMUSG00000091474.3	novel	4004	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	115	junction_1	51.0514446416553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGGTAATGAATTTCT	NA	False	NA	45	True	AATAAA	-27	NA	41248708	41277957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_41248825_41261099_41261922_41262579_41262676_41274146_41274257_41274676
m54284U_201203_174622/18744667/ccs	chr2	-	735	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	87	-72	87	72	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGTGTCAAATGGCAC	NA	False	NA	NA	False	NA	NA	NA	75022079	75021344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_75021300_75022100
m54284U_201203_174622/18745565/ccs	chr6	+	4162	28	NIC	ENSMUSG00000031865.17	novel	4163	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	89.8211910680514	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTCTGTGTGGCTCTG	524	False	NA	NA	False	ATTAAA	-16	NA	83142932	83177099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83143051_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
m54284U_201203_174622/18745658/ccs	chr17	-	4132	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	78	junction_14	48.9638342423458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGACAAGGTTTCTGCT	NA	False	NA	-8	True	AATAAA	-21	NA	56891585	56869948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
m54284U_201203_174622/18809849/ccs	chr19	-	2576	8	NIC	ENSMUSG00000010095.14	novel	1819	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2610	junction_7	209.056871473301	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCACCCCTGCCTCATGA	NA	False	NA	12	True	AATAAA	-2	NA	8691243	8684950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_8685459_8685557_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
m54284U_201203_174622/18810630/ccs	chr2	-	3292	7	NNC	ENSMUSG00000032869.16	novel	3809	7	NA	NA	0	-263	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	122.997854543168	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTGTTATTTTGCGT	NA	False	NA	NA	False	NA	NA	NA	151583230	151558244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577543_151582930
m54284U_201203_174622/18811217/ccs	chr9	+	4217	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_3	173.46384379452	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCCTTTTTGAAAT	NA	False	NA	20	True	AATAAA	-26	NA	48896684	48953817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914293_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
m54284U_201203_174622/18876369/ccs	chr8	-	3307	5	NIC	ENSMUSG00000019731.14	novel	4383	6	NA	NA	0	-938	combination_of_known_splicesites	FALSE	canonical	2	11	junction_3	107.383366961555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGCTCACAGCAAGTAT	NA	False	NA	-11	True	AATAAA	-20	NA	73246458	73235422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73237838_73238504_73238751_73241964_73242091_73245685_73245757_73246009
m54284U_201203_174622/18940146/ccs	chr6	-	4518	1	Genic_Genomic	ENSMUSG00000029821.16	novel	NA	NA	NA	NA	-10653	573	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	50181148	50176630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr6_-_50176600_50181100
m54284U_201203_174622/18941964/ccs	chrX	+	3228	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_9	160.572169094159	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349452_158350914_158351011_158357940_158358094_158375066
m54284U_201203_174622/18942281/ccs	chr10	+	4396	26	NIC	ENSMUSG00000005682.10	novel	4445	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_2	63.6982134757326	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGGATTCTTTGGCTT	NA	False	NA	20	True	AATAAA	-29	NA	128139203	128157227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128139341_128139963_128140363_128143987_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150051_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151106_128151355_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
m54284U_201203_174622/1900613/ccs	chr11	+	2948	17	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_14	285.018201173188	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542806_69542900_69543035_69543134_69543429
m54284U_201203_174622/19008001/ccs	chr2	+	1116	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_8	105.177751330783	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	181	False	NA	13	True	AATAAA	-13	NA	26476650	26482694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482254_26482429
m54284U_201203_174622/1901674/ccs	chr11	-	1275	11	NNC	ENSMUSG00000057113.14	novel	1633	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	1051	junction_7	5857.07688527306	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTTCTATTTGCTTA	NA	False	NA	-32	True	AATAAA	-21	NA	33113077	33102509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110435_33110827_33110922_33111105_33111226_33111547_33111628_33112921
m54284U_201203_174622/1902169/ccs	chr11	+	761	6	NNC	ENSMUSG00000009076.11	novel	792	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	269.190192986297	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGCCTGTCTCTCTTG	NA	False	NA	13	True	TATAAA	-16	NA	4654677	4687669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_4654713_4672357_4672490_4678584_4678648_4680186_4680268_4682066_4682179_4687331
m54284U_201203_174622/19070978/ccs	chr7	+	2887	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	239.564555956402	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648584_3653796_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201203_174622/19071460/ccs	chr2	-	1762	7	Fusion	ENSMUSG00000068479.6_ENSMUSG00000048222.4	novel	3362	7	NA	NA	0	-1569	multi-exon	FALSE	canonical	3	201	junction_1	92.2887979238121	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTTCTTTTTTTCTTT	NA	False	NA	-21	True	NA	NA	NA	121337146	121292284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_-_121292786_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
m54284U_201203_174622/19071557/ccs	chr4	+	2223	6	Intergenic	novelGene_2446	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	93	junction_4	6.89927532426414	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTAGGGTCATTTTTG	NA	False	NA	NA	False	NA	NA	NA	156390360	156410435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156390627_156404917_156405026_156405277_156405347_156405588_156405691_156408356_156409051_156409451
m54284U_201203_174622/19073421/ccs	chr4	-	3377	6	NIC	ENSMUSG00000039410.17	novel	851	5	NA	NA	0	-2356	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	8.81816307401944	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCAAGGTGTGTGCTT	NA	False	NA	-7	True	NA	NA	NA	154419309	154402937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_154405380_154407703_154407938_154412716_154412892_154413120_154413291_154418831_154418910_154419031
m54284U_201203_174622/19138876/ccs	chr7	+	175	1	Intergenic	novelGene_3831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGAAAAAGTCTC	385	False	NA	NA	False	NA	NA	NA	44218944	44219119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_44218900_44219100
m54284U_201203_174622/19139352/ccs	chr4	-	459	1	ISM	ENSMUSG00000028957.13	ENSMUST00000103204.11	5999	21	40017	538	11497	-404	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTTTTCTCTGCAGTTC	NA	False	NA	NA	False	NA	NA	NA	151089105	151088646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_-_151088600_151089100
m54284U_201203_174622/19204558/ccs	chr7	+	946	7	NIC	ENSMUSG00000030588.13	novel	1126	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_5	581.164826495509	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	6061	False	NA	12	True	AATAAA	-15	NA	28937777	28946954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945325_28945420_28946661
m54284U_201203_174622/19204589/ccs	chr19	+	1912	2	NNC	ENSMUSG00000071661.8	novel	2004	2	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGAACTGGTGTTGG	5366	False	NA	12	True	CATAAA	-17	NA	8779856	8782210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_8779896_8780337
m54284U_201203_174622/19333943/ccs	chr3	+	3275	7	NIC	ENSMUSG00000027852.15	novel	1920	7	NA	NA	0	363	intron_retention	FALSE	canonical	3	25	junction_1	287.714219708068	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102965909	102974155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_102965946_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
m54284U_201203_174622/19335116/ccs	chr14	-	4826	23	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_14	9.98511288563344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTCTGAGAGAATATT	NA	False	NA	-14	True	AATAAA	-18	NA	70666832	70609925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955_70664193_70666770
m54284U_201203_174622/19398934/ccs	chr1	+	5043	14	NIC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_2	27.9297512684442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTCCAGTGCTTTCTGT	4250	False	NA	11	True	AATAAA	-17	NA	91072810	91098517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094520_91094807_91096414_91096561_91096678_91096819_91097809
m54284U_201203_174622/19399239/ccs	chr17	+	3644	25	NIC	ENSMUSG00000024392.18	novel	1722	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_24	175.311028167717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8820	False	NA	32	True	AATAAA	-33	NA	35354485	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354605_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
m54284U_201203_174622/19401157/ccs	chr8	-	2644	19	NIC	ENSMUSG00000019470.13	novel	2677	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_14	106.734469191448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTCTTGACCTCCTTC	1011	False	NA	-4	True	AATACA	-16	NA	3671316	3660086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666126_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
m54284U_201203_174622/19401422/ccs	chr5	+	5196	21	NNC	ENSMUSG00000005672.13	novel	5241	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_4	274.538754094937	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTTTCTGTTTGTTTT	766	False	NA	14	True	NA	NA	NA	75735614	75817382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_75735779_75767685_75767959_75769929_75770212_75771466_75771604_75775984_75776154_75781506_75781697_75783648_75783765_75797953_75798069_75799624_75799807_75801152_75801260_75801358_75801486_75801769_75801875_75801986_75802098_75806495_75806647_75808407_75808497_75809046_75809175_75810206_75810330_75813209_75813322_75813416_75813517_75813879_75813986_75815073
m54284U_201203_174622/19466161/ccs	chr3	+	2489	21	NIC	ENSMUSG00000028034.16	novel	6523	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	449.059002248034	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGTAAAGGATTCAT	NA	False	NA	43	True	AATAAA	-33	NA	151916118	151938426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
m54284U_201203_174622/19467096/ccs	chr8	-	1763	10	NNC	ENSMUSG00000031667.17	novel	2079	10	NA	NA	0	-319	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	118.014228060397	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860655	91850515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
m54284U_201203_174622/19661047/ccs	chr8	+	4090	12	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	0	-905	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	86.8177534496809	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAGGTAAAATTTACC	NA	False	NA	21	True	AATAAA	-18	NA	27513928	27529451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_27514194_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
m54284U_201203_174622/19661762/ccs	chr6	-	4687	9	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	8407	junction_1	771.069296091473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8913	False	NA	-21	True	AATAAA	-12	NA	122719481	122704784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122719334
m54284U_201203_174622/19662850/ccs	chr5	-	1870	12	NNC	ENSMUSG00000029363.15	novel	2796	11	NA	NA	0	468	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	696.626155121956	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACCGTGCTGGGCTGTCT	NA	False	NA	-20	True	AATAAA	-16	NA	117527112	117517213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_117517972_117518083_117518204_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
m54284U_201203_174622/19663559/ccs	chr16	+	6520	20	NIC	ENSMUSG00000022637.12	novel	3864	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	17.7907193584424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTGTATGTTATTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	51851968	52028411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_51852049_51852540_51852662_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52006711_52006844_52009375_52009517_52014521_52014642_52024795
m54284U_201203_174622/1967354/ccs	chr4	-	5620	19	NIC	ENSMUSG00000028906.18	novel	5141	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	34.7035060668707	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGACTGTGAGGATTGAT	NA	False	NA	NA	False	AATAAA	-21	NA	131776402	131650723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_131653245_131653814_131653920_131655802_131655884_131657004_131657107_131663049_131663179_131664325_131664776_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
m54284U_201203_174622/19726642/ccs	chr17	+	2990	13	NNC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	115.94239470051	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332316	26342228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336792_26337340_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
m54284U_201203_174622/19794164/ccs	chr5	+	877	8	NIC	ENSMUSG00000029359.14	novel	785	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	22.6445470302252	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGCATCCCCATCTGTC	4368	False	NA	9	True	AATAAA	-14	NA	118174095	118199935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_118174195_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
m54284U_201203_174622/19857815/ccs	chr12	-	3298	10	NNC	ENSMUSG00000020988.10	novel	3340	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_5	166.433689016095	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTATGATCATATT	NA	False	NA	0	True	AATAAA	-34	NA	69771647	69737206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_69739271_69746259_69746392_69748057_69748216_69748976_69749145_69752538_69752574_69753939_69754061_69759395_69759528_69768085_69768238_69768851_69768968_69771427
m54284U_201203_174622/19858631/ccs	chr9	+	186	1	Intergenic	novelGene_5065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGGCTCAGTATGTAGC	NA	False	NA	NA	False	NA	NA	NA	106343740	106343926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_106343700_106343900
m54284U_201203_174622/198735/ccs	chr4	+	5560	13	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	154	junction_7	67.3700394999307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-25	True	NA	19	True	AGTAAA	-16	NA	11558921	11615805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11612439_11612617_11612819_11615442
m54284U_201203_174622/19923237/ccs	chr4	-	5410	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	105	junction_18	100.421042627873	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTCCTCAGGGGTTGTTT	NA	False	NA	-12	True	AATAAA	-20	NA	115980882	115951460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980697
m54284U_201203_174622/19923632/ccs	chr9	+	1997	11	NIC	ENSMUSG00000061393.15	novel	3175	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_3	40.556133938037	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	119231183	119262581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_119231664_119256520_119256729_119257032_119257143_119257290_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
m54284U_201203_174622/19924242/ccs	chr14	-	4069	23	Fusion	ENSMUSG00000071350.13_ENSMUSG00000091144.3	novel	2995	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_9	48.8120023175441	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGAGTTCACAGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59678333	59618281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr14_-_59618934_59620759_59620832_59622232_59622365_59622915_59622980_59623729_59623798_59624795_59624846_59626717_59626849_59628314_59628423_59630478_59630601_59639782_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
m54284U_201203_174622/19925125/ccs	chr15	+	5355	24	NNC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	151.690312316448	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGCATTTTTATTATAG	NA	False	NA	17	True	AATAAA	-24	NA	65658888	65745665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_65659096_65682033_65682174_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
m54284U_201203_174622/19925574/ccs	chr11	+	3979	27	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	279.926250325513	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115715850_115716079_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745888_115745932_115746017_115746080_115746291
m54284U_201203_174622/199333/ccs	chr6	-	169	1	Intergenic	novelGene_3263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAAGAGTTTGAT	3247	False	NA	NA	False	NA	NA	NA	49242310	49242141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_49242100_49242300
m54284U_201203_174622/19991326/ccs	chrX	+	1666	1	Intergenic	novelGene_9592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGGCAGATCTGAGTCTG	NA	False	NA	NA	False	NA	NA	NA	103017103	103018769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_103017100_103018800
m54284U_201203_174622/20054598/ccs	chr10	-	188	1	Intergenic	novelGene_5447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACCAAACTAACTAAAT	9146	False	NA	NA	False	NA	NA	NA	80108842	80108654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_80108700_80108800
m54284U_201203_174622/20054635/ccs	chr12	+	2367	4	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-299	-533	intron_retention	FALSE	canonical	3	43	junction_1	46.5999523128035	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17931898	17954143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr12_+_17932324_17950660_17950788_17950987_17951049_17952389
m54284U_201203_174622/20054930/ccs	chr6	-	779	7	NNC	ENSMUSG00000030316.14	novel	1168	8	NA	NA	-2255	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	166.976462080405	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	False	NA	-41	True	AATAAA	-18	NA	115011481	114981348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011453
m54284U_201203_174622/20055143/ccs	chr14	+	1723	8	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	0	-95	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	74.5727969223116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTGAATACTTCTTTAA	NA	False	NA	14	True	ATTAAA	-19	NA	31807782	31825064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821490_31821589_31822942_31823052_31824213
m54284U_201203_174622/20056006/ccs	chr11	-	2452	6	NIC	ENSMUSG00000017376.16	novel	4444	11	NA	NA	-16959	0	intron_retention	FALSE	canonical	0	0	junction_4	39.0456143503979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTCGCTGTCTTATTTCC	NA	False	NA	-1	True	ATTAAA	-19	NA	78480184	78457993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_78459802_78462296_78462391_78463058_78463258_78465666_78465754_78477694_78477905_78480130
m54284U_201203_174622/20056469/ccs	chrX	+	4269	16	Fusion	ENSMUSG00000000838.18_ENSMUSG00002075986.1	novel	4076	16	NA	NA	0	0	multi-exon	FALSE	canonical	3	169	junction_13	205.444883119536	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGTCTGACAGATGTTT	NA	False	NA	20	True	ATTAAA	-26	NA	67722187	67761569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755872_67756020_67756846_67756930_67759170
m54284U_201203_174622/20120061/ccs	chr17	+	3585	8	NIC	ENSMUSG00000024188.17	novel	2670	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	531	junction_1	36.4159642049966	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATGTTTACATTAGTGT	NA	False	NA	14	True	ATTAAA	-26	NA	26471924	26499694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
m54284U_201203_174622/20120832/ccs	chr1	+	2156	13	NIC	ENSMUSG00000026305.16	novel	2760	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	25.9117090649511	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTTTTGTTTTTTA	NA	False	NA	NA	False	AATGAA	-13	NA	90981228	91056666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
m54284U_201203_174622/20120944/ccs	chr11	-	3166	13	NIC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	intron_retention	FALSE	canonical	1	287	junction_4	184.269484873529	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687229	120680026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120680386_120680482_120680559_120680668_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
m54284U_201203_174622/20121781/ccs	chr16	+	3466	21	ISM	ENSMUSG00000022957.21	ENSMUST00000056482.14	5364	29	-18	20209	0	130	5prime_fragment	FALSE	canonical	3	117	junction_18	19.7557586541241	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAACAGCAAATGCCCG	NA	False	NA	NA	False	AATAAA	-20	NA	91526240	91648334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693
m54284U_201203_174622/20185484/ccs	chr11	-	3045	6	NNC	ENSMUSG00000016984.8	novel	4185	6	NA	NA	0	-1135	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	64.8549150026426	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGTTTTTTGTGTCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	17903875	17889890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902582_17902704_17903562
m54284U_201203_174622/20187146/ccs	chr18	-	3544	12	NIC	ENSMUSG00000033323.15	novel	3713	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	54.0249406744333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTGTTCTCTGGTG	NA	False	NA	-9	True	AATAAA	-12	NA	80512910	80451179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
m54284U_201203_174622/20187393/ccs	chr5	+	7859	22	NNC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_21	66.0182754880245	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGTGGCTTTTAT	NA	False	NA	24	True	AATAAA	-21	NA	103840239	104003188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567_104001812_104002377
m54284U_201203_174622/20251772/ccs	chr15	-	6900	5	NIC	ENSMUSG00000041852.16	novel	7417	5	NA	NA	0	-488	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	45.3727616527802	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACACTATTTATTTATT	9168	False	NA	-10	True	AATAAA	-14	NA	82784012	82693314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82783702
m54284U_201203_174622/20252500/ccs	chr1	-	473	1	FSM	ENSMUSG00000081214.4	ENSMUST00000117444.2	333	1	-62	-78	-62	78	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCTGGGCTTGAGAGG	NA	False	NA	NA	False	NA	NA	NA	181069947	181069474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181069500_181069900
m54284U_201203_174622/20317206/ccs	chr13	-	8350	17	NIC	ENSMUSG00000038014.8	novel	5105	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	179	junction_7	32.3553873991643	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATGGTGTGGCTTTTA	6383	False	NA	-18	True	AATAAA	-21	NA	49121493	49032694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_49034572_49038748_49038846_49039212_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
m54284U_201203_174622/20381889/ccs	chr19	+	3700	12	NNC	ENSMUSG00000004054.10	novel	2885	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	23.4485545555329	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGTCACCTTTCTTGG	NA	False	NA	10	True	AATAAA	-22	NA	5738769	5752893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_5738802_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
m54284U_201203_174622/20382931/ccs	chr2	+	6054	20	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	561	junction_4	183.725843570163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7219	False	NA	14	True	AATAAA	-14	NA	29779822	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29816115_29816715_29816842_29820481
m54284U_201203_174622/20383177/ccs	chr11	+	2849	17	ISM	ENSMUSG00000020908.15	ENSMUST00000007301.14	5992	40	15138	0	15138	0	3prime_fragment	TRUE	canonical	2	11	junction_1	5.51949669354009	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTCTTGTGCCTT	NA	False	NA	11	True	AATAAA	-22	NA	66984263	66993117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
m54284U_201203_174622/20448836/ccs	chr2	-	4405	28	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	185	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_23	24.986800356266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753492	164733801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749498_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
m54284U_201203_174622/20513516/ccs	chr8	-	4854	22	NNC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	35.7078089365284	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722123	12664278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12688987_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
m54284U_201203_174622/20578671/ccs	chr5	+	4627	17	NIC	ENSMUSG00000035851.15	novel	3269	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_11	68.274234479414	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTATTTCCTTGTCT	NA	False	NA	13	True	AATAAA	-21	NA	86952091	86984518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86977339_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
m54284U_201203_174622/20578904/ccs	chr5	-	2620	15	NNC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	0	213	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_12	138.576362209669	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCAATTTTTAATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	33940081	33899664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33927560_33927637_33935951_33936013_33939817
m54284U_201203_174622/20644547/ccs	chr12	+	1971	14	NNC	ENSMUSG00000021222.10	novel	2008	14	NA	NA	-59	70	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_9	62.8602281575852	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTATGTACTTCTTTG	NA	False	NA	15	True	AATAAA	-28	NA	83567348	83588764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584489_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
m54284U_201203_174622/20646599/ccs	chr3	+	205	1	Intergenic	novelGene_1456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGTGCTTAGAACTA	NA	False	NA	NA	False	NA	NA	NA	85937229	85937434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_85937200_85937400
m54284U_201203_174622/20711564/ccs	chr9	+	3446	6	NIC	ENSMUSG00000032425.16	novel	3472	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	4.17612260356422	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTTTGAGTAGTGTT	NA	False	NA	NA	False	NA	NA	NA	88430152	88453114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_88430562_88434714_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
m54284U_201203_174622/20775577/ccs	chr15	+	4626	36	NNC	ENSMUSG00000022191.17	novel	4519	35	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_3	169.480343812418	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	80	False	NA	30	True	ATTAAA	-20	NA	12824975	12935377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_12825025_12826150_12826254_12827312_12827379_12830388_12830523_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
m54284U_201203_174622/20776499/ccs	chr3	+	5170	21	NNC	ENSMUSG00000027665.14	novel	8917	20	NA	NA	-448	1620	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_2	13.8524366087703	104	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAATAAATAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	32451371	32518597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_32451642_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
m54284U_201203_174622/20776708/ccs	chr17	+	4190	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	421.360337999171	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9538	False	NA	10	True	AATAAA	-11	NA	35220026	35235298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234896_35235162
m54284U_201203_174622/20776949/ccs	chrX	-	174	1	Intergenic	novelGene_9423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATTATATTTATCTA	NA	False	NA	NA	False	NA	NA	NA	36338108	36337934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_36337900_36338100
m54284U_201203_174622/20842630/ccs	chr1	-	4441	23	NIC	ENSMUSG00000041879.14	novel	4189	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	518	junction_14	36.4385875296646	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTGCATACTCTAAG	NA	False	NA	-19	True	AGTAAA	-19	NA	135358229	135312210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_135313216_135313664_135313742_135313956_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
m54284U_201203_174622/20906717/ccs	chr8	+	3141	12	NIC	ENSMUSG00000070002.8	novel	457	5	NA	NA	-187	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_1	42.1565363107432	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	False	NA	8	True	AATAAA	-16	NA	70991919	71045508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70992143_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
m54284U_201203_174622/20908466/ccs	chr10	-	175	1	Intergenic	novelGene_5220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAGAAAAAAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	20382251	20382076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_20382100_20382300
m54284U_201203_174622/2097548/ccs	chr11	-	4514	15	NIC	ENSMUSG00000009073.17	novel	4720	16	NA	NA	71	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_8	100.950306020905	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	8916	False	NA	-8	True	AATAAA	-21	NA	4799465	4715844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
m54284U_201203_174622/2097907/ccs	chr2	-	2380	6	NIC	ENSMUSG00000027490.18	novel	2732	7	NA	NA	0	-428	intron_retention	FALSE	canonical	0	0	junction_3	402.755806910341	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGCGTTTATTTATTT	9502	False	NA	-2	True	NA	NA	NA	154411812	154401981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406429_154411408
m54284U_201203_174622/21104840/ccs	chr5	+	4287	27	NIC	ENSMUSG00000028970.10	novel	4306	28	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_4	62.5254149509853	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTTATGTATATGA	NA	False	NA	10	True	ATTAAA	-17	NA	8848146	8916315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
m54284U_201203_174622/21104843/ccs	chr11	+	3351	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	225.610775944373	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697437	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97697547_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201203_174622/21104977/ccs	chr10	-	2929	13	NIC	ENSMUSG00000020238.15	novel	2841	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	345	junction_12	32.4987179234299	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332176	81322290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
m54284U_201203_174622/21105404/ccs	chr2	+	184	1	Intergenic	novelGene_757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGAAATAAACTGCAAAAC	NA	False	NA	NA	False	NA	NA	NA	34708866	34709050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34708900_34709000
m54284U_201203_174622/21169829/ccs	chr19	+	8131	37	NNC	ENSMUSG00000067889.8	novel	8299	37	NA	NA	-381	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	10.212669147246	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGTTGTTGCTTTCC	5180	False	NA	13	True	ATTAAA	-23	NA	4762030	4802388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_4762341_4768846_4769026_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
m54284U_201203_174622/21234547/ccs	chr16	+	3094	6	NNC	ENSMUSG00000022967.14	novel	468	2	NA	NA	3777	0	intron_retention	FALSE	canonical	3	8	junction_1	62.6143753462414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATATTTTCTTTATTTA	NA	False	NA	24	True	NA	NA	NA	91293313	91304329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_91293396_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
m54284U_201203_174622/21235508/ccs	chr4	+	2070	15	NIC	ENSMUSG00000039768.17	novel	3151	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	216.086445759137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGGAAACTAGTCTCTT	9118	False	NA	33	True	TATAAA	-25	NA	152018195	152065684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
m54284U_201203_174622/21299246/ccs	chr2	+	2893	9	NIC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1876	junction_7	268.766511120712	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119545_130119768_130119891_130120075
m54284U_201203_174622/21299262/ccs	chr7	+	7173	10	NIC	ENSMUSG00000074221.13	novel	4005	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	81.79755195709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTCAAGACTCACTTTCTC	NA	False	NA	19	True	AATAAA	-22	NA	29683379	29727707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_29683654_29684684_29684752_29687013_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
m54284U_201203_174622/21299270/ccs	chr4	-	192	2	Antisense	novelGene_ENSMUSG00000012123.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATAAAATTTGAGG	NA	False	NA	NA	False	NA	NA	NA	133797969	133677421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_133677561_133797916
m54284U_201203_174622/21299274/ccs	chr17	-	3687	7	NNC	ENSMUSG00000117284.2	novel	3474	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	18.5779140080066	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTTGTATTTTAC	NA	False	NA	NA	False	NA	NA	NA	22533818	22504851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22531009_22531223_22532217_22532302_22533727
m54284U_201203_174622/21365249/ccs	chr11	+	2536	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_19	159.252962838496	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080743	29111680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
m54284U_201203_174622/21365988/ccs	chr7	+	1501	6	NIC	ENSMUSG00000038618.13	novel	661	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	122.763186664407	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGTGTCCTGAGGTT	NA	False	NA	20	True	AATAAA	-17	NA	140796115	140798571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140796173_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
m54284U_201203_174622/21366089/ccs	chr5	+	5302	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	26.9931964217138	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2005	False	NA	7	True	AATAAA	-8	NA	33021056	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021088_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
m54284U_201203_174622/21430631/ccs	chr19	+	4296	12	NNC	ENSMUSG00000010663.6	novel	742	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	231.70289468403	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTGTTATTCATTTGA	NA	False	NA	18	True	AATAAA	-19	NA	10160917	10174238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_10162131_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
m54284U_201203_174622/21496156/ccs	chr2	-	4276	15	NIC	ENSMUSG00000027104.19	novel	4210	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	111.739333143833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722972	73646863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013_73704090_73710628_73710724_73722818
m54284U_201203_174622/21498245/ccs	chrX	+	5523	25	NIC	ENSMUSG00000025332.15	novel	6449	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_21	110.865502850175	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAGAAAAAAAAAAGCAAAA	NA	False	NA	-20	True	AATAAA	-35	NA	151016249	151056768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151054007_151054590_151054855_151054926_151055070_151055271_151055704
m54284U_201203_174622/21563199/ccs	chr6	-	217	1	Intergenic	novelGene_3440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGTGCTAAAGCAAAAAGA	7478	False	NA	NA	False	AAGAAA	-17	NA	117900279	117900062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_117900100_117900300
m54284U_201203_174622/21563837/ccs	chr17	+	180	1	Intergenic	novelGene_8723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATGCTTATCAG	9556	False	NA	NA	False	NA	NA	NA	74712281	74712461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_74712300_74712500
m54284U_201203_174622/21628553/ccs	chr6	-	3277	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	19.154746695993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCAGTTGTTTCTGTTT	NA	False	NA	-2	True	AATAAA	-13	NA	148797660	148743990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148744553_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
m54284U_201203_174622/21628957/ccs	chr2	-	5596	23	NIC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	0	-2029	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	15.2967884059756	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATTTGTGTCTTTTAT	NA	False	NA	NA	False	NA	NA	NA	90410991	90265261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90305314_90305334_90410499
m54284U_201203_174622/2163128/ccs	chr17	-	2216	8	NIC	ENSMUSG00000003200.11	novel	2073	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	585	junction_1	52.4832334743046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGTCCCATCTTCATT	NA	False	NA	-1	True	ATTAAA	-17	NA	56343576	56323749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
m54284U_201203_174622/2163695/ccs	chr3	+	4244	14	NNC	ENSMUSG00000039068.17	novel	7607	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	61.5862314590318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152101668	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134485_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
m54284U_201203_174622/2164282/ccs	chr2	-	3965	12	NIC	ENSMUSG00000032046.16	novel	1969	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	181	junction_3	36.581845291875	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTATTGTTTTCTCTA	NA	False	NA	-29	True	AATAAA	-14	NA	150746651	150674436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_150675061_150676198_150676327_150677192_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
m54284U_201203_174622/2164702/ccs	chr11	+	1387	9	NNC	ENSMUSG00000020610.18	novel	2816	9	NA	NA	0	-231	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_6	52.2636046881575	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTCGTGGGTAGAGTTC	NA	False	NA	12	True	AATAAA	-14	NA	109316807	109327584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320876_109324715_109324880_109325405_109325583_109327388
m54284U_201203_174622/2165164/ccs	chr11	-	4034	8	NIC	ENSMUSG00000001036.18	novel	4452	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	108.038164080843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTGGCTGTGTCC	NA	False	NA	0	True	TATAAA	-25	NA	61470513	61408074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61424396_61424508_61426096_61426210_61436975_61437738_61470392
m54284U_201203_174622/2165257/ccs	chr7	+	2537	8	NIC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	456	junction_1	90.2970155675599	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4743239_4744778_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
m54284U_201203_174622/21692436/ccs	chr7	-	3352	11	NIC	ENSMUSG00000041375.20	novel	2175	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	100	junction_1	39.1453700966027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGACACCCACCCCACT	NA	False	NA	-14	True	AATAAA	-14	NA	16020705	16009401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16010036_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16016531_16016676_16016776_16018195_16018301_16018419_16018472_16020624
m54284U_201203_174622/21759015/ccs	chr5	-	4167	12	NNC	ENSMUSG00000029405.17	novel	2716	12	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_11	596.734973081999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231208	92200022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231131
m54284U_201203_174622/21759431/ccs	chr5	-	3711	20	NIC	ENSMUSG00000002221.12	novel	5850	21	NA	NA	0	-1969	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	239.186340042984	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGGGTGATTATTTAAA	NA	False	NA	-3	True	AATAAA	-17	NA	27996393	27947046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27988678_27988772_27993640_27993776_27996196
m54284U_201203_174622/21889394/ccs	chr17	-	2942	10	NIC	ENSMUSG00000025728.17	novel	3233	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_4	88.3641455694685	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCAGCTTGGGTGTCCTG	NA	False	NA	-5	True	AATAAA	-18	NA	26160909	26145400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
m54284U_201203_174622/21891200/ccs	chr4	+	2476	12	NIC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	50.580432632484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696417	115736447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115735146
m54284U_201203_174622/21891385/ccs	chr19	-	1679	9	NIC	ENSMUSG00000057858.9	novel	2035	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_8	105.606507256892	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTGTGTGTGTGTGT	9773	False	NA	NA	False	AGTAAA	-14	NA	60215129	60187330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60213296_60213332_60214741
m54284U_201203_174622/21891571/ccs	chr9	+	1587	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-147	at_least_one_novel_splicesite	FALSE	canonical	3	419	junction_1	6030.49106982258	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_64080912_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
m54284U_201203_174622/21955024/ccs	chr7	+	3746	8	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	570	junction_2	59.1256013474187	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
m54284U_201203_174622/21955208/ccs	chr1	-	5189	22	NNC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	-158	intron_retention	FALSE	canonical	3	44	junction_20	134.170213752917	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTATTAACATCTGAACC	NA	False	NA	0	True	AATAAA	-23	NA	180971769	180920981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_180921475_180922548_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966867_180969890_180969965_180971615
m54284U_201203_174622/21956056/ccs	chr6	-	6623	24	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	0	-1214	combination_of_known_junctions	TRUE	canonical	3	7	junction_10	9.74883057307558	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAATTTATGACAGA	NA	False	NA	NA	False	AAAACA	-28	NA	94260898	93653649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671190_93674174_93674469_93676596_93676790_93678270_93678363_93681257_93681342_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184_93920302_94259990
m54284U_201203_174622/22086222/ccs	chr19	+	2276	16	NNC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_15	188.405661627599	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517429
m54284U_201203_174622/22087689/ccs	chr8	+	3638	11	NIC	ENSMUSG00000037656.10	novel	436	3	NA	NA	219	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	165.224362610361	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22996460	23059628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_22996671_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
m54284U_201203_174622/22152693/ccs	chr7	-	2827	6	NIC	ENSMUSG00000047554.15	novel	2774	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	346	junction_5	24.5324275195098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTATCTGTCTTCTGTC	NA	False	NA	-5	True	AATACA	-21	NA	109585369	109572691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_109574159_109575801_109575941_109577916_109578690_109580195_109580325_109581862_109581981_109585168
m54284U_201203_174622/22153775/ccs	chr5	-	189	1	Intergenic	novelGene_2731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTTCAGTTTCACTGAG	8826	False	NA	NA	False	NA	NA	NA	107967395	107967206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_107967200_107967400
m54284U_201203_174622/22218944/ccs	chr2	-	3954	17	NIC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	53	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	466.318589961573	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627396	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
m54284U_201203_174622/22282533/ccs	chr13	-	2033	17	NIC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_16	2269.89933353332	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877_58549932_58550206
m54284U_201203_174622/22283168/ccs	chr7	-	6612	33	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	39.344581504319	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGTATTGACTTTCT	10001	False	NA	-6	True	AATAAA	-20	NA	101859352	101768604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
m54284U_201203_174622/22284571/ccs	chr2	-	7222	7	NIC	ENSMUSG00000035666.15	novel	7127	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	102.107378120617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGATTTTTTTTTATTCTT	NA	False	NA	1	True	AATAAA	-25	NA	28730364	28712310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726036_28726140_28726422_28726529_28729894
m54284U_201203_174622/2229425/ccs	chr1	+	5389	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTCTTGGCTCCATTTC	NA	False	NA	NA	False	NA	NA	NA	9006616	9012005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_9006600_9012000
m54284U_201203_174622/2230743/ccs	chr13	-	2269	12	NIC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_5	25.7267908724551	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210418	74185750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198418_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
m54284U_201203_174622/2230889/ccs	chr14	-	6738	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	0	-71	intron_retention	FALSE	canonical	3	200	junction_2	22.070510597096	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTTTTTAATGGTT	NA	False	NA	-13	True	AATAAA	-14	NA	58127733	58070230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_58074104_58075047_58075125_58076546_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
m54284U_201203_174622/22348063/ccs	chr11	-	1969	13	NIC	ENSMUSG00000018669.15	novel	2250	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	831	junction_12	109.66473529201	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTGGCAGTCACT	NA	False	NA	-41	True	AATAAA	-15	NA	96807255	96798641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
m54284U_201203_174622/22348150/ccs	chr12	+	2229	11	NIC	ENSMUSG00000037486.19	novel	1483	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	15.7419820861288	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGCTTTCCTATATTT	NA	False	NA	NA	False	AATAAA	-21	NA	3476911	3547061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_3477213_3492473_3492557_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224
m54284U_201203_174622/22349140/ccs	chr4	-	175	1	Intergenic	novelGene_2362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGTGAATTTAAG	NA	False	NA	NA	False	NA	NA	NA	147624764	147624589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_147624600_147624800
m54284U_201203_174622/22349656/ccs	chr13	+	3546	17	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	154.35328794684	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55593374_55596902_55597006_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607145
m54284U_201203_174622/22349843/ccs	chr7	-	3103	23	NIC	ENSMUSG00000054662.9	novel	3019	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_9	28.5868619768933	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGCCTCATGATGTA	NA	False	NA	-21	True	AATAAA	-15	NA	140697719	140681137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140681841_140681931_140682045_140682170_140682265_140682337_140682440_140682999_140683148_140683904_140684298_140684395_140684494_140684581_140684640_140686675_140686788_140686963_140687001_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163_140688299_140688530_140688605_140688697_140688757_140688853_140688901_140690288_140690426_140690543_140690670_140691067_140691143_140697626
m54284U_201203_174622/22349903/ccs	chr15	+	2197	14	NIC	ENSMUSG00000022556.12	novel	2102	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	103.530403161092	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATATATATATA	7121	False	NA	18	True	NA	NA	NA	76361621	76385178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76383331_76383416_76384147_76384254_76384330_76384397_76384466_76384537_76384616
m54284U_201203_174622/22478883/ccs	chr10	+	1979	7	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	1429.30585328061	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGTGTCACCTTGTTT	846	False	NA	39	True	AATAAA	-40	NA	127894822	127913141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910158_127911935
m54284U_201203_174622/22479076/ccs	chr11	+	4262	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_15	68.4275346625903	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCACACATGTGGACA	NA	False	NA	39	True	AATAAA	-24	NA	60590670	60605012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601118_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
m54284U_201203_174622/22480279/ccs	chr16	-	3405	15	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	56	0	intron_retention	FALSE	canonical	3	1276	junction_6	135.200248309155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAATACTTGGTTTAAA	NA	False	NA	-8	True	AATAAA	-8	NA	15455208	15441973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
m54284U_201203_174622/22481740/ccs	chrX	+	3859	25	NIC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	0	combination_of_known_junctions	TRUE	canonical	3	134	junction_1	227.828696459765	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118806	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/22544844/ccs	chr8	-	1106	12	NIC	ENSMUSG00000031708.18	novel	1158	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_10	1139.58096546911	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTGTGTGTTCTTTA	NA	False	NA	-5	True	AATAAA	-13	NA	84321106	84298328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84301106_84301158_84320968
m54284U_201203_174622/22545056/ccs	chr16	+	2341	4	NIC	ENSMUSG00000014075.16	novel	838	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	251	junction_2	21.6384431561566	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAATAGTTTTTATG	NA	False	NA	9	True	AATAAA	-21	NA	32238563	32247917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_32238746_32241637_32241772_32244058_32245740_32247573
m54284U_201203_174622/22546688/ccs	chr18	+	2984	4	NNC	ENSMUSG00000057561.11	novel	1905	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	692.734837838805	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAATGTTTTTTTTTTCT	NA	False	NA	20	True	ATTAAA	-17	NA	46730791	46743278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_46730868_46731707_46731768_46732327_46732468_46740570
m54284U_201203_174622/22546703/ccs	chr9	-	5522	4	NIC	ENSMUSG00000039952.16	novel	5662	4	NA	NA	0	-232	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	175.562587763516	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108141157	108082064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108086861_108095211_108095610_108130207_108130357_108140978
m54284U_201203_174622/22546984/ccs	chr9	+	2242	8	NIC	ENSMUSG00000032245.13	novel	2142	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	23.492942926482	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCGTGGCTGTTTCTAG	NA	False	NA	13	True	AATAAA	-21	NA	62746073	62759288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_62746237_62747766_62747874_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
m54284U_201203_174622/22612344/ccs	chr17	-	2623	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	62.0745240609714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGCTGCCAGGCATT	NA	False	NA	2	True	AATAAA	-31	NA	56891585	56869938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885636_56885845_56885920_56885986_56889983_56890072_56891273
m54284U_201203_174622/22612389/ccs	chr11	-	2969	21	NIC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_20	92.1311022402316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671484	117656813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117670251_117670337_117671361
m54284U_201203_174622/22675973/ccs	chr18	-	4940	20	NIC	ENSMUSG00000036501.8	novel	3344	21	NA	NA	0	1780	combination_of_known_splicesites	FALSE	canonical	3	10	junction_18	9.19412072770848	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTGTAAATGTATGTTT	NA	False	NA	-27	True	AATAAA	-19	NA	34639884	34573623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34632738_34632906_34639581
m54284U_201203_174622/22676378/ccs	chr7	-	3594	10	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	121	0	intron_retention	FALSE	canonical	3	742	junction_2	36.4661182164729	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTCCCTCCCTGCTT	5561	False	NA	-9	True	AATAAA	-14	NA	44519091	44512491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44512869_44512958_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
m54284U_201203_174622/22676691/ccs	chr3	+	1507	6	NNC	ENSMUSG00000068856.4	novel	1915	6	NA	NA	0	-175	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	681.366450597621	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTCTGGTGAAGTAACT	NA	False	NA	20	True	AATAAA	-16	NA	96079862	96084705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081828_96083950_96084125_96084294
m54284U_201203_174622/22678025/ccs	chr4	-	2158	7	NIC	ENSMUSG00000041459.16	novel	2006	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	409	junction_1	257.510949066033	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	NA	False	NA	-12	True	AATAAA	-16	NA	148711222	148701182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_148701302_148702022_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
m54284U_201203_174622/22741710/ccs	chr11	+	2517	4	NIC	ENSMUSG00000041623.18	novel	2062	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_2	114.479498407163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTTCTTCTTTTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	113575272	113585473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_113576098_113578599_113580048_113583220_113583329_113585337
m54284U_201203_174622/22743135/ccs	chr12	+	177	1	Intergenic	novelGene_6597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGAAACCTGGGGTGC	NA	False	NA	NA	False	NA	NA	NA	24952072	24952249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_24952100_24952200
m54284U_201203_174622/22743339/ccs	chr9	-	178	1	Intergenic	novelGene_4904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGTAGTTCAGC	9517	False	NA	NA	False	NA	NA	NA	66907088	66906910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66906900_66907100
m54284U_201203_174622/22806613/ccs	chr10	-	2048	15	NIC	ENSMUSG00000034024.9	novel	1959	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1936	junction_8	235.925154596598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	False	NA	-16	True	AATAAA	-14	NA	116899719	116886910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
m54284U_201203_174622/22807943/ccs	chr17	+	208	1	Antisense	novelGene_ENSMUSG00000117113.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGGAATGGGTGTGA	7668	False	NA	NA	False	NA	NA	NA	74497293	74497501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_74497300_74497500
m54284U_201203_174622/22808806/ccs	chr1	+	2872	14	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	120.381346723873	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201203_174622/22872522/ccs	chr13	-	2629	15	NIC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_11	2205.15711874854	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	5157	False	NA	-23	True	AATAAA	-15	NA	58549924	58539052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549877
m54284U_201203_174622/22872845/ccs	chr1	+	4656	25	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_14	56.9085371207363	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201203_174622/22874515/ccs	chr12	+	2853	14	NIC	ENSMUSG00000004789.11	novel	2764	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	294	junction_6	23.4056079862733	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGGGATCTGTGCTCCT	NA	False	NA	22	True	ATTAAA	-22	NA	85157631	85180864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
m54284U_201203_174622/22939276/ccs	chr10	+	8421	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_21	106.704358641347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932760	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959894_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
m54284U_201203_174622/2294294/ccs	chr5	+	4348	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	277.445789933109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186421	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_139186455_139195838_139196083_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/2294639/ccs	chr2	-	3464	15	NIC	ENSMUSG00000027244.15	novel	3604	17	NA	NA	-168	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_14	82.3031975474259	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCTATTCCAAATGTC	NA	False	NA	-1	True	AATAAA	-19	NA	91536247	91504963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_91506809_91509071_91509201_91509657_91509775_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91535925
m54284U_201203_174622/2295050/ccs	chr19	-	4804	23	NIC	ENSMUSG00000024908.16	novel	4952	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_22	86.8173369782787	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	3625749	3504932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3625640
m54284U_201203_174622/2296060/ccs	chr1	-	2111	1	FSM	ENSMUSG00000056708.6	ENSMUST00000055322.6	3276	1	0	1165	0	-1165	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCACTGCCTGTTTGTATG	NA	False	NA	-4	True	ATTAAA	-14	NA	154975382	154973271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_154973300_154975400
m54284U_201203_174622/2296254/ccs	chr14	-	2509	14	NIC	ENSMUSG00000022099.18	novel	2643	16	NA	NA	174	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	54.765773443168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70864320	70841109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_70842295_70842407_70842489_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
m54284U_201203_174622/23004721/ccs	chr17	-	6435	38	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	0	70	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_37	16.4770908096234	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGGGTATGTTTGATTC	NA	False	NA	-47	True	TATAAA	-17	NA	84773633	84498894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771883_84773521
m54284U_201203_174622/23005590/ccs	chr9	+	1163	6	NIC	ENSMUSG00000002820.7	novel	5951	10	NA	NA	0	2526	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	199.915382099527	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAAATGTTAGCCATTG	8647	False	NA	NA	False	AATAAA	-19	NA	21176601	21180749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21180598
m54284U_201203_174622/23069007/ccs	chr11	+	3657	19	ISM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	829	0	0	0	3prime_fragment	FALSE	canonical	3	9	junction_8	10.9994388184574	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTGCTTCCTGGTTTA	NA	False	NA	14	True	AATAAA	-31	NA	100751310	100775995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
m54284U_201203_174622/23070105/ccs	chr5	+	1897	14	NNC	ENSMUSG00000029387.11	novel	2672	13	NA	NA	0	255	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	271.182486212518	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTTCCTTAGAGTGTTT	NA	False	NA	20	True	AATAAA	-21	NA	124717228	124734905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_124717265_124720510_124720591_124721585_124721675_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
m54284U_201203_174622/23071201/ccs	chr8	+	4690	17	NNC	ENSMUSG00000036712.16	novel	7990	18	NA	NA	0	105	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.119833828452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCCATCTTGTAATCTT	NA	False	NA	113	True	TATAAA	-16	NA	89423687	89475188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_89423822_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
m54284U_201203_174622/23071568/ccs	chr8	-	173	1	Intergenic	novelGene_4524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	115554716	115554543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_115554500_115554700
m54284U_201203_174622/23134972/ccs	chr16	-	3052	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_11	305.295983850266	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854782_4854922_4865597_4865678_4866613_4866651_4867669
m54284U_201203_174622/23135129/ccs	chr15	-	1716	14	NIC	ENSMUSG00000022336.4	novel	1506	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_12	986.125998646776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATTTTGCTTGAATT	2663	False	NA	-22	True	AATAAA	-16	NA	43146115	43113453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43144414_43144625_43145998
m54284U_201203_174622/23135152/ccs	chr2	-	4175	19	NIC	ENSMUSG00000026669.15	novel	3494	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	560	junction_18	74.3326897497467	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGTGAAACGTGACTC	NA	False	NA	0	True	AATAAA	-38	NA	5017564	4995534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_4996288_4996905_4996949_4997688_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
m54284U_201203_174622/23200971/ccs	chr10	-	1037	1	NIC	ENSMUSG00000093674.8	novel	544	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCTGTTACGTGTTTT	NA	False	NA	-21	True	AATAAA	-26	NA	128385022	128383985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_128384000_128385000
m54284U_201203_174622/23201096/ccs	chr16	-	3139	5	NIC	ENSMUSG00000004071.14	novel	3953	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	434	junction_4	30.8139578762612	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTATTTTAGACCAT	NA	False	NA	-14	True	AATAAA	-14	NA	4607799	4584704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4586514_4586608_4587660_4587906_4588016_4588534_4588600_4607694
m54284U_201203_174622/23201098/ccs	chr11	+	677	3	NIC	ENSMUSG00000020803.4	novel	981	4	NA	NA	0	-228	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTAAGTTTTTTAACACG	NA	False	NA	16	True	AATAAA	-16	NA	72098372	72100613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72098595_72099078_72099161_72100240
m54284U_201203_174622/23267163/ccs	chr13	-	3217	15	NNC	ENSMUSG00000034617.8	novel	3692	15	NA	NA	0	82	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	99.6211445877811	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGCTATTGTGTGCGT	NA	False	NA	-8	True	AATAAA	-14	NA	68730268	68709399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_68710550_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
m54284U_201203_174622/23267485/ccs	chr6	+	2573	5	NIC	ENSMUSG00000030105.9	novel	4443	7	NA	NA	0	-1731	combination_of_known_splicesites	TRUE	canonical	2	3	junction_4	225.793600440757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGACAATTTTACCTTA	NA	False	NA	18	True	AATAAA	-18	NA	108760059	108800508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108798463
m54284U_201203_174622/23331499/ccs	chr2	-	6202	28	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	35.2770341128966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8072	False	NA	-5	True	AATAAA	-26	NA	121101888	121028731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
m54284U_201203_174622/23331846/ccs	chr9	-	2263	21	NIC	ENSMUSG00000032590.15	novel	2518	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_19	42.4109360896456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTCTGTGCTGGTACT	NA	False	NA	-33	True	AATAAA	-13	NA	107971678	107962612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107971425_107971559_107971633
m54284U_201203_174622/23332167/ccs	chr9	+	5897	32	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_6	29.9277311985561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9116	False	NA	19	True	AATAAA	-16	NA	108357079	108367729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
m54284U_201203_174622/23332425/ccs	chr19	+	2773	14	NIC	ENSMUSG00000024843.16	novel	2683	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	87.0287308881383	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGACTGTTACCCTTCAT	5757	False	NA	6	True	AATAAA	-17	NA	3901809	3944369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_3902414_3914647_3914760_3921002_3921063_3925734_3925789_3931997_3932121_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
m54284U_201203_174622/23463190/ccs	chr10	+	2578	5	NIC	ENSMUSG00000006728.13	novel	2038	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	4641	junction_1	500.667804037767	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATACTGGGATCTTT	NA	False	NA	23	True	ACTAAA	-30	NA	126899471	126903104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_126900590_126900703_126900872_126901023_126901873_126901969_126902106_126902797
m54284U_201203_174622/23464304/ccs	chr8	-	4400	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_25	174.818195849288	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573189
m54284U_201203_174622/23595064/ccs	chr9	-	4398	15	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	-457	combination_of_known_junctions	FALSE	canonical	3	128	junction_14	71.3097941007676	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2246	False	NA	-1	True	AATAAA	-15	NA	70411007	70333168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
m54284U_201203_174622/23595602/ccs	chr1	-	191	1	Intergenic	novelGene_340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAATCCCACAAATAA	NA	False	NA	NA	False	NA	NA	NA	135611111	135610920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_135610900_135611100
m54284U_201203_174622/2359699/ccs	chr14	+	5258	13	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	1632	junction_5	92.9194319468933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATAAATGATCCAGCTAGG	NA	False	NA	NA	False	AATAAA	-39	NA	45567284	45587162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
m54284U_201203_174622/2361588/ccs	chr11	+	1990	8	NIC	ENSMUSG00000020897.13	novel	1950	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_1	225.027889427973	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936496	68942490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68936835_68938551_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
m54284U_201203_174622/23726431/ccs	chr11	+	206	1	Intergenic	novelGene_5845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATGATCACATATACCA	NA	False	NA	NA	False	NA	NA	NA	54742203	54742409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_54742200_54742400
m54284U_201203_174622/23855212/ccs	chr3	-	3800	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-243	combination_of_known_junctions	FALSE	canonical	3	275	junction_1	225.006501963668	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTCTCCTCCTTTATT	3507	False	NA	-2	True	AATATA	-16	NA	89959822	89907842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201203_174622/23922308/ccs	chr17	+	3729	3	Antisense	novelGene_ENSMUSG00000035051.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACGTGGCCTTGGGCTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	80540209	80553790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_80540458_80549334_80549558_80550532
m54284U_201203_174622/23922442/ccs	chr18	+	9838	16	NNC	ENSMUSG00000005871.16	novel	12346	16	NA	NA	0	-2619	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	24.5586825560511	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCATTCCTAAAATTTA	NA	False	NA	15	True	AATAAA	-26	NA	34353976	34452623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34429083_34429183_34431475_34431855_34433018_34433115_34434314_34434369_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
m54284U_201203_174622/23923440/ccs	chr4	+	144	1	Intergenic	novelGene_1931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAGAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	87960716	87960860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_87960700_87960900
m54284U_201203_174622/23987350/ccs	chr2	-	3308	5	NNC	ENSMUSG00000087179.9	novel	874	4	NA	NA	0	2339	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	66.2382064974588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGATGGTCTTTCGTGTT	NA	False	NA	-3	True	NA	NA	NA	156681740	156672629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_156675347_156675537_156675633_156679742_156679834_156680337_156680457_156681454
m54284U_201203_174622/23988403/ccs	chr10	+	1745	6	NIC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	254.352039504306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80438784_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
m54284U_201203_174622/24053068/ccs	chr5	+	2161	6	NIC	ENSMUSG00000029464.11	novel	1592	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	424	junction_4	33.4998507459362	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGAGGTTTGTAAA	8115	False	NA	NA	False	AATAAA	-42	NA	122510589	122520965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122520240_122520323
m54284U_201203_174622/24117932/ccs	chr12	+	1094	9	NIC	ENSMUSG00000021115.16	novel	1509	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	336.388168638554	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	False	NA	NA	False	ATTAAA	-42	NA	105976541	106041479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105976618_106002798_106002964_106009095_106009152_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
m54284U_201203_174622/24119238/ccs	chr10	+	8385	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	512	0	at_least_one_novel_splicesite	FALSE	canonical	3	275	junction_3	79.9461553490976	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932760	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
m54284U_201203_174622/24183322/ccs	chr5	+	157	1	Intergenic	novelGene_2576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	NA	False	NA	NA	False	NA	NA	NA	53752819	53752976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_53752800_53753000
m54284U_201203_174622/24183940/ccs	chr10	+	7437	29	NIC	ENSMUSG00000061589.15	novel	6808	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_27	19.5948764648688	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTTCTCAGTGCCAGTT	1657	False	NA	16	True	AATAAA	-20	NA	80591041	80631295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80627976_80628608_80629340
m54284U_201203_174622/24184831/ccs	chr17	+	2688	6	NIC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	384	junction_2	57.1615255219803	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3071	False	NA	34	True	AAAAAG	-45	NA	23945442	23955709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_23945616_23951310_23951799_23952796_23954347_23954536_23954695_23955297_23955376_23955468
m54284U_201203_174622/24248490/ccs	chr9	-	3864	8	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	125.395862965967	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
m54284U_201203_174622/24248648/ccs	chr19	-	178	1	Intergenic	novelGene_9084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	4408534	4408356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4408400_4408500
m54284U_201203_174622/24249339/ccs	chr4	+	5106	21	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	159.256546176288	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/24249522/ccs	chr5	-	1779	4	NIC	ENSMUSG00000029348.12	novel	2678	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	11.1455023315337	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCATCCTAAATTTCTG	NA	False	NA	-1	True	AATAGA	-28	NA	112542732	112533309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_112533728_112534624_112534739_112539023_112540122_112542583
m54284U_201203_174622/24249640/ccs	chr10	-	3948	25	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	100.456449588311	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	False	NA	1	True	AATAAA	-35	NA	62628065	62580240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627908
m54284U_201203_174622/24250545/ccs	chr15	-	2933	1	Antisense	novelGene_ENSMUSG00000034259.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGCAGAGGGCCCACT	NA	False	NA	NA	False	NA	NA	NA	76215363	76212430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_76212400_76215400
m54284U_201203_174622/24250621/ccs	chr1	+	1870	14	NIC	ENSMUSG00000026020.10	novel	9507	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	539.464549344996	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTTGTGATCTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	59724135	59750669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
m54284U_201203_174622/24251160/ccs	chr3	+	5741	23	NIC	ENSMUSG00000027820.13	novel	3543	9	NA	NA	-67	2090	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	89.7851890084843	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTGTGCTTTGCATTT	NA	False	NA	19	True	NA	NA	NA	63148890	63291134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_63148988_63207545_63207716_63208399_63208436_63234134_63234297_63235205_63235287_63235392_63235489_63235590_63235710_63237070_63237137_63247436_63247572_63249327_63249430_63250917_63251055_63251162_63251257_63252545_63252675_63253474_63253574_63254557_63254639_63256038_63256143_63266326_63266386_63269352_63269473_63272182_63272317_63272417_63272484_63275899_63275996_63276300_63276378_63287653
m54284U_201203_174622/2425875/ccs	chr5	-	3597	16	NIC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	0	-688	combination_of_known_junctions	FALSE	canonical	1	9	junction_15	70.0521710346415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCCTTGCTTATTACCC	NA	False	NA	-3	True	ATTAAA	-24	NA	23881446	23711137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23881311
m54284U_201203_174622/2426616/ccs	chr9	+	2484	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	0	-682	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	78.7000282366178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695971	14745260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_14696054_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
m54284U_201203_174622/2427037/ccs	chr2	+	3641	7	NIC	ENSMUSG00000015095.13	novel	2388	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	231	junction_2	20.763884243775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCATCTAGTCTGTTTG	NA	False	NA	16	True	AATAAA	-16	NA	25390870	25395483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25394340_25394428_25394642_25394721
m54284U_201203_174622/2427307/ccs	chr1	-	174	1	FSM	ENSMUSG00000041926.16	ENSMUST00000189615.2	2275	1	2114	-13	-383	13	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGCAAAGTATAGACAAACA	NA	False	NA	NA	False	NA	NA	NA	135205539	135205365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_135205400_135205500
m54284U_201203_174622/24313889/ccs	chr9	+	394	1	Intergenic	novelGene_5051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAAAAACATGTCCT	NA	False	NA	NA	False	NA	NA	NA	103077974	103078368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_103078000_103078400
m54284U_201203_174622/24314220/ccs	chr17	+	863	3	NNC	ENSMUSG00000092349.2	novel	807	3	NA	NA	-11916	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_1	2.5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTGTTCTGACTTAAAT	NA	False	NA	13	True	NA	NA	NA	34112192	34125649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_34112309_34124501_34124892_34125292
m54284U_201203_174622/24314497/ccs	chr1	-	2213	12	NIC	ENSMUSG00000025980.15	novel	2423	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	335	junction_11	1793.34097000842	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGTGTTACCCTTTC	4455	False	NA	-6	True	AATAAA	-16	NA	55127183	55116993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
m54284U_201203_174622/24316056/ccs	chr6	-	2941	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_15	85.4180308834148	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTGCTTAAGCTTGACA	NA	False	NA	-7	True	AATAAA	-26	NA	39354609	39312918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39344577_39344701_39354552
m54284U_201203_174622/24316256/ccs	chr10	+	3509	23	NIC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	29.5710728095454	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGCATCTTTCTGTGC	1778	False	NA	4	True	ATTAAA	-17	NA	45453924	45588255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_45454247_45464475_45464531_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
m54284U_201203_174622/24445057/ccs	chr1	+	5689	9	NNC	ENSMUSG00000026782.16	novel	4723	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_5	45.7295036054405	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTGTCTTGTAGAATC	NA	False	NA	15	True	AATAAA	-17	NA	60448853	60520317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487239_60487362_60492762_60492922_60509824_60509999_60515898
m54284U_201203_174622/24446857/ccs	chr15	-	526	1	FSM	ENSMUSG00000067870.6	ENSMUST00000181935.2	378	1	-89	-59	-89	59	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAACTATGGCAAGGGAA	NA	False	NA	NA	False	AATAAA	-41	NA	90648948	90648422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_90648400_90648900
m54284U_201203_174622/24447645/ccs	chr11	-	2393	14	NIC	ENSMUSG00000020883.19	novel	8601	15	NA	NA	0	2388	combination_of_known_junctions	FALSE	canonical	3	12	junction_12	38.3036760328971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACCATCAGGGGACCC	3171	False	NA	-15	True	AATAAA	-17	NA	98040432	97979528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98019140_98019203_98040141
m54284U_201203_174622/24576012/ccs	chr7	-	3762	22	NNC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_13	1297.1663360577	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676649_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201203_174622/24576054/ccs	chr2	+	8333	34	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_15	163.181984187192	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATGTTACATACCACT	NA	False	NA	1	True	ATTAAA	-13	NA	51962912	52012121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995450_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201203_174622/24576151/ccs	chr17	-	2319	15	NIC	ENSMUSG00000024127.16	novel	2734	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_14	52.4877050715067	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTGTGTAATTTTGC	NA	False	NA	-2	True	TTTAAA	-5	NA	85397669	85371956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85395871_85397533
m54284U_201203_174622/24576373/ccs	chr7	-	4946	1	Antisense	novelGene_ENSMUSG00000107181.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACACCCAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	42745939	42740993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_42741000_42745900
m54284U_201203_174622/24576631/ccs	chr17	+	3961	8	NIC	ENSMUSG00000005936.20	novel	2162	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	202.145431583808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	29171654	29188523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29171732_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
m54284U_201203_174622/24576798/ccs	chr4	-	2629	15	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_12	196.22390636355	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	False	NA	-3	True	ATTAAA	-18	NA	48473459	48430857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473265
m54284U_201203_174622/24642047/ccs	chr4	+	1740	12	NNC	ENSMUSG00000029063.17	novel	3152	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_11	206.229111138539	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTTAAGTAACAGCTTT	9714	False	NA	34	True	AATAAA	-20	NA	155648298	155675454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155675050
m54284U_201203_174622/24642507/ccs	chr1	+	4353	24	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_12	70.5257330129452	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201203_174622/24643563/ccs	chr17	+	3956	19	NIC	ENSMUSG00000024044.20	novel	2703	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	15.4121364715371	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69382677	69596984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_69382991_69514880_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
m54284U_201203_174622/24643685/ccs	chr10	+	4637	28	NIC	ENSMUSG00000039994.16	novel	4341	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	180	junction_27	54.6045516827295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	6606	False	NA	11	True	AATAAA	-41	NA	128067948	128088801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
m54284U_201203_174622/24644041/ccs	chr3	-	185	1	Intergenic	novelGene_1446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGCAAGAAACACTGTAA	9852	False	NA	NA	False	NA	NA	NA	79516108	79515923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_79515900_79516100
m54284U_201203_174622/24774525/ccs	chr6	+	2211	6	NNC	ENSMUSG00000029836.16	novel	1217	2	NA	NA	233	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	928.575338892865	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGACTTTTTTTTGTC	NA	False	NA	-1	True	AATAAA	-19	NA	51447958	51460684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_51448491_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
m54284U_201203_174622/24774858/ccs	chr15	-	175	1	Intergenic	novelGene_7673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGTATAAATTGATA	NA	False	NA	NA	False	NA	NA	NA	34368624	34368449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_34368400_34368600
m54284U_201203_174622/24840931/ccs	chr13	-	3092	8	NIC	ENSMUSG00000021427.11	novel	9333	8	NA	NA	0	-6611	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	347.599875531318	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGTTTAACTAAAAAC	5980	False	NA	0	True	ATTAAA	-15	NA	38178059	38161987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177476
m54284U_201203_174622/24840937/ccs	chr2	-	180	1	Intergenic	novelGene_684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGATGAATCTT	NA	False	NA	NA	False	NA	NA	NA	30251783	30251603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_30251600_30251800
m54284U_201203_174622/24904232/ccs	chr11	+	9685	22	NNC	ENSMUSG00000049470.14	novel	10099	21	NA	NA	-81	-587	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	33.2330464169275	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCACTGTGCTCTCGC	NA	False	NA	41	True	AATAAA	-28	NA	53241578	53312070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_53241957_53258901_53258994_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
m54284U_201203_174622/24905759/ccs	chr6	-	209	1	Intergenic	novelGene_3168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGATCTTGCATCT	9846	False	NA	NA	False	AAGAAA	-14	NA	35091124	35090915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_35090900_35091100
m54284U_201203_174622/2491787/ccs	chr6	+	4507	14	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	49.1722007382605	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	287	False	NA	28	True	AATAAA	-16	NA	113284152	113301821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
m54284U_201203_174622/2492316/ccs	chr9	-	7655	55	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	0	-315	combination_of_known_splicesites	FALSE	canonical	1	2	junction_51	42.2093385151617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTTCTGTAATTTT	NA	False	NA	1	True	AATAAA	-27	NA	104140129	104028795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114775_104114926_104115663_104115740_104123958_104124040_104139897
m54284U_201203_174622/24970382/ccs	chr9	+	7645	25	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_12	56.5700156148703	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335334	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
m54284U_201203_174622/25101692/ccs	chr18	-	3775	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	38	junction_8	467.644637162308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCATGTTATTTATT	NA	False	NA	-8	True	AATAAA	-18	NA	42395194	42335411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
m54284U_201203_174622/25102259/ccs	chr2	+	3531	12	NIC	ENSMUSG00000036646.14	novel	3755	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_8	111.452617512615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGCAGTGTTACTTT	3998	False	NA	33	True	ATTAAA	-21	NA	25222773	25242224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238582_25238704_25239181_25239380_25239462_25239595_25240373
m54284U_201203_174622/25102475/ccs	chr10	-	4176	20	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_1	12.6836645438291	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484539	83435896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
m54284U_201203_174622/25102831/ccs	chr9	+	7580	24	NNC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_12	53.3849663424073	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335334	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380902_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
m54284U_201203_174622/25168438/ccs	chr9	+	6495	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_18	11.688258408137	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGCCAAGTAACTTCCT	2333	False	NA	9	True	AATAAA	-17	NA	74978469	75125766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
m54284U_201203_174622/25168477/ccs	chr7	+	1962	9	ISM	ENSMUSG00000025726.12	ENSMUST00000119083.2	2899	18	27027	0	27027	0	3prime_fragment	FALSE	canonical	3	108	junction_1	7.38135319572231	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTGTGTACAGTGTG	NA	False	NA	11	True	AATAAA	-20	NA	80791624	80820164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_80791793_80803147_80803274_80810712_80810844_80814018_80814188_80814273_80814472_80817713_80817796_80818711_80818811_80818914_80819027_80819287
m54284U_201203_174622/25232780/ccs	chr11	-	2626	1	Intergenic	novelGene_5754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGAGGGCGGGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	26364696	26362070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_26362100_26364700
m54284U_201203_174622/25232932/ccs	chr12	+	932	11	NNC	ENSMUSG00000060073.10	novel	2846	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	96	junction_3	1233.52561384026	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_71021542_71025506_71025590_71030092_71030217_71031270_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
m54284U_201203_174622/25233435/ccs	chr6	-	3014	11	Fusion	ENSMUSG00000001156.10_ENSMUSG00000001158.14	novel	912	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_5	964.534607984597	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCCAACATAAAACAGTG	7651	False	NA	NA	False	NA	NA	NA	86661499	86625997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86652464_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
m54284U_201203_174622/25233944/ccs	chr9	-	2662	18	NIC	ENSMUSG00000032400.19	novel	2957	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_10	392.146263582254	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCCTGGTTTAATCTT	NA	False	NA	0	True	ACTAAA	-20	NA	64080185	64044425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
m54284U_201203_174622/25298773/ccs	chr9	+	2754	14	NIC	ENSMUSG00000032059.14	novel	463	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	59.440487865033	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATGTTTCAGTCTGCT	NA	False	NA	38	True	TTTAAA	-45	NA	50686845	50754842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_50687284_50687843_50687980_50690269_50690405_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
m54284U_201203_174622/25298990/ccs	chrX	-	3725	27	NNC	ENSMUSG00000031139.17	novel	4227	28	NA	NA	798	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_22	124.869091214874	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGGTGTTCGTGTATT	NA	False	NA	-2	True	AATAAA	-29	NA	59223651	59101315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_59102051_59105206_59105314_59107439_59107583_59108453_59108518_59109956_59110036_59112514_59112608_59122540_59122763_59128218_59128345_59129760_59129854_59152815_59152909_59154776_59154847_59155115_59155232_59155927_59155995_59158738_59158819_59160462_59160507_59166299_59166472_59168475_59168668_59170068_59170261_59172375_59172496_59174656_59174772_59175403_59175538_59178967_59179118_59181613_59181734_59198259_59198351_59200962_59201078_59205586_59205656_59223528
m54284U_201203_174622/25299396/ccs	chr12	-	4508	24	NIC	ENSMUSG00000061533.17	novel	4807	26	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	8	junction_21	13.9047529647043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAATGATGCGTCTGTT	6202	False	NA	-5	True	AATAAA	-19	NA	91351133	90965265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91336835_91336971_91348421_91348563_91351007
m54284U_201203_174622/25428205/ccs	chr11	+	312	1	Intergenic	novelGene_6264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGAGGCTCTAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	97088385	97088697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97088400_97088700
m54284U_201203_174622/25428425/ccs	chr3	-	4389	7	NNC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	253716	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	34.8456915876586	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27510831	27470310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27510822
m54284U_201203_174622/25430755/ccs	chr5	+	177	1	Intergenic	novelGene_2878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGTTTGTTTAGTT	NA	False	NA	NA	False	NA	NA	NA	123209251	123209428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123209300_123209400
m54284U_201203_174622/25496270/ccs	chr17	+	453	5	NNC	ENSMUSG00000098090.9	novel	799	3	NA	NA	0	19018	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_1	29.2232783924049	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCATGGTTCATTTTGA	NA	False	NA	11	True	AATAAA	-16	NA	95057539	95101578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_95057661_95062638_95062734_95063861_95063952_95092912_95092936_95101454
m54284U_201203_174622/25560669/ccs	chr1	-	6886	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-103	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_42	331.983347941817	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7784	False	NA	17	True	NA	NA	NA	84817135	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816744_84816835_84816949
m54284U_201203_174622/2557196/ccs	chr17	+	1806	5	NNC	ENSMUSG00000046711.17	novel	1045	6	NA	NA	-854	0	at_least_one_novel_splicesite	FALSE	canonical	2	97	junction_1	2292.54869086787	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAAGGAGCATTCA	NA	False	NA	NA	False	AATAAA	-27	NA	27774616	27782648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_27774913_27778506_27778645_27779901_27779986_27780434_27780486_27781411
m54284U_201203_174622/2557619/ccs	chr16	+	4751	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	72.1576052817719	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482726	31692167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615784_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
m54284U_201203_174622/25624905/ccs	chr8	+	2941	16	NNC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	159.525323660192	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	5159	False	NA	34	True	AATAAA	-25	NA	125589810	125616796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_125590052_125597518_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
m54284U_201203_174622/25626050/ccs	chr8	-	2618	8	NNC	ENSMUSG00000031601.17	novel	2615	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	222.709291614491	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGTGACTGATGGCTT	NA	False	NA	-1	True	AATAAA	-23	NA	40964759	40945580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40955329_40955369_40960495_40960690_40963055_40963268_40964580
m54284U_201203_174622/25626928/ccs	chr7	-	3783	21	NIC	ENSMUSG00000030528.13	novel	4598	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_19	97.0775334462099	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAGTGGCCATTGTTT	NA	False	NA	-33	True	AATAAA	-22	NA	80184867	80104839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_80105185_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80164336_80164439_80184790
m54284U_201203_174622/25692030/ccs	chr9	+	167	1	Intergenic	novelGene_5132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCG	NA	False	NA	NA	False	NA	NA	NA	114503177	114503344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_114503200_114503300
m54284U_201203_174622/25692638/ccs	chr9	+	8415	21	NIC	ENSMUSG00000044791.17	novel	8350	21	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	30.6144981993826	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCCTCAAAATTA	NA	False	NA	20	True	AATAAA	-21	NA	110361577	110447682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_110361821_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421469_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
m54284U_201203_174622/25757869/ccs	chr5	+	4044	9	NNC	ENSMUSG00000029120.11	novel	4088	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	58.3950714958035	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGGCTCGCAAGGCTGC	NA	False	NA	9	True	AATAAA	-21	NA	37025856	37112422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_37026235_37080311_37080366_37083628_37083795_37084874_37084988_37088579_37088758_37097440_37097606_37104411_37104582_37106896_37106989_37109694
m54284U_201203_174622/25821450/ccs	chr6	+	3566	11	ISM	ENSMUSG00000030276.20	ENSMUST00000203524.3	2745	13	-91	-4	-91	0	intron_retention	FALSE	canonical	3	13	junction_6	3.96106046406767	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGTTCTCTGGGCTTGG	NA	False	NA	NA	False	ATTAAA	-16	NA	113370029	113391548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_113370156_113371652_113371822_113371958_113372057_113374890_113375020_113375730_113375846_113376627_113376733_113378262_113378459_113382259_113382409_113384136_113384381_113385865_113386302_113389749
m54284U_201203_174622/25823529/ccs	chr13	-	3755	11	NIC	ENSMUSG00000034928.17	novel	4292	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_10	242.423369335549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	False	NA	-7	True	AATAAA	-26	NA	54835907	54827213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54835843
m54284U_201203_174622/25887553/ccs	chr7	+	3983	12	NNC	ENSMUSG00000011263.17	novel	4016	12	NA	NA	-59	0	intron_retention	TRUE	canonical	1	4	junction_6	3.17010832257504	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGATTCCCACTGCTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	19197196	19230687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_19197279_19203392_19203930_19207852_19208448_19212233_19212346_19213712_19213815_19213904_19214006_19215170_19215282_19218523_19218660_19222976_19223100_19223532_19223689_19225580_19225703_19228881
m54284U_201203_174622/25887750/ccs	chr3	-	2367	6	NNC	ENSMUSG00000027663.13	novel	7797	6	NA	NA	0	-5430	intron_retention	FALSE	canonical	2	11	junction_2	46.1024945095165	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACTGATGGAGTGTTA	NA	False	NA	-27	True	AATAAA	-20	NA	32419827	32394374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_32395845_32397482_32397584_32397696_32397868_32399606_32399730_32415038_32415366_32419652
m54284U_201203_174622/25952412/ccs	chr4	+	4382	21	NIC	ENSMUSG00000028830.15	novel	4073	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	14.5995719115322	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647336	126748129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_126647561_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
m54284U_201203_174622/25953437/ccs	chr12	-	2720	4	NIC	ENSMUSG00000020961.16	novel	9896	7	NA	NA	27861	2256	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	9.7410927974683	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCATTTCTCTGGGCCT	NA	False	NA	-2	True	TATAAA	-17	NA	91652887	91606060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_91606580_91608494_91608698_91614005_91615845_91652728
m54284U_201203_174622/25953849/ccs	chr1	+	4132	29	NIC	ENSMUSG00000026074.16	novel	5632	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_15	25.9180419391432	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCGGTGCTAGGAGTGCT	NA	False	NA	28	True	AATAAA	-38	NA	39940072	40064129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
m54284U_201203_174622/26018999/ccs	chr11	+	199	1	Intergenic	novelGene_6068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTATCTAGGACCCTA	4935	False	NA	NA	False	NA	NA	NA	78320003	78320202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_78320000_78320200
m54284U_201203_174622/26019752/ccs	chr6	-	3396	16	NIC	ENSMUSG00000000441.18	novel	3070	17	NA	NA	56	0	intron_retention	FALSE	canonical	3	610	junction_7	74.4163661808043	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTAATGGCTACTGACTC	8200	False	NA	-28	True	AATAAA	-15	NA	115653540	115595557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
m54284U_201203_174622/26020387/ccs	chr8	+	1294	13	NIC	ENSMUSG00000031479.10	novel	3574	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	113.361607992595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGGTCTCAGAAACT	NA	False	NA	22	True	TATAAA	-17	NA	22682824	22708648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_22682983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
m54284U_201203_174622/26149045/ccs	chrX	+	14295	84	NIC	ENSMUSG00000025261.19	novel	14579	83	NA	NA	0	-518	intron_retention	TRUE	canonical	3	75	junction_28	155.568509150593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACGGAGTTTTTTTCAAAC	NA	False	NA	38	True	AATAAA	-27	NA	150586322	150717895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_150586566_150589715_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150642450_150642685_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681439_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
m54284U_201203_174622/26149964/ccs	chr9	+	5635	1	Intergenic	novelGene_4689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACACTTAACTTT	NA	False	NA	NA	False	NA	NA	NA	30913947	30919582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_30913900_30919600
m54284U_201203_174622/26151691/ccs	chr8	+	3326	21	NIC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2092	combination_of_known_junctions	FALSE	canonical	2	881	junction_1	574.494062197339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760510	111782204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111760541_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
m54284U_201203_174622/26214433/ccs	chr6	+	2940	2	NNC	ENSMUSG00000052751.17	novel	3138	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTGGTGGTGTTCTTTT	NA	False	NA	21	True	AATAAA	-19	NA	48570833	48576016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_48570987_48573229
m54284U_201203_174622/26214769/ccs	chr8	-	4528	15	NNC	ENSMUSG00000038225.16	novel	3797	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	46.3622053145949	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAATTGAAAAATAGTG	NA	False	NA	-10	True	AATAAA	-19	NA	47070247	47028628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_47029757_47030320_47032202_47034472_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045641_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474_47063661_47065404_47065482_47070168
m54284U_201203_174622/26216756/ccs	chr7	-	1899	7	NIC	ENSMUSG00000036459.16	novel	1962	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	114.870579349109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATGGTGGTTATTTCTC	NA	False	NA	-2	True	AATATA	-20	NA	33832693	33808967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818563_33818632_33824909_33825012_33831913
m54284U_201203_174622/26217287/ccs	chr16	+	488	1	FSM	ENSMUSG00000081824.6	ENSMUST00000121906.2	319	1	-44	-125	-44	125	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATGAACAAATAGAAAATC	NA	False	NA	NA	False	AATAAA	-28	NA	42775949	42776437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_42775900_42776400
m54284U_201203_174622/2622851/ccs	chrX	+	2152	19	NNC	ENSMUSG00000031360.15	novel	3289	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	50.5288390945895	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCGGGCCCGGCAGAAAGT	NA	False	NA	11	True	ATTAAA	-17	NA	161684600	161814315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_161684705_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
m54284U_201203_174622/26281518/ccs	chr19	+	2945	9	NNC	ENSMUSG00000024989.16	novel	2757	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_2	131.651469323362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCTAGTATGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	38043536	38062871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_38043766_38045857_38046432_38048517_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
m54284U_201203_174622/26281968/ccs	chr9	-	4592	23	NIC	ENSMUSG00000032462.15	novel	6478	24	NA	NA	-87	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_20	50.0203470996248	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTGTCTTCTTTTT	NA	False	NA	-1	True	AATAAA	-25	NA	99022227	98920453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98987583_98987771_99004336_99004430_99022043
m54284U_201203_174622/26346279/ccs	chr1	+	3645	15	NIC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	0	-91	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	32.5526261519367	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTGAATGTATAGTTTT	NA	False	NA	3	True	ATTAAA	-18	NA	44187068	44220329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_44187126_44196096_44196273_44197303_44197496_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218306_44218392_44219690
m54284U_201203_174622/26346713/ccs	chr4	+	2121	14	NIC	ENSMUSG00000040945.14	novel	3999	15	NA	NA	67	-1750	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	1232.37672907551	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAGTTGTATTTCTTT	1516	False	NA	13	True	NA	NA	NA	140427918	140448781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_140428061_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
m54284U_201203_174622/26346984/ccs	chr14	+	2118	9	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2290	junction_5	180.02113591187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296835	14303777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
m54284U_201203_174622/26348357/ccs	chr10	+	1791	7	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	246.166384563142	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80438784_80444636_80444685_80445163_80445291_80445474_80445632_80446861_80446964_80448175_80448294_80450437
m54284U_201203_174622/26413808/ccs	chrX	+	3177	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_13	93.3887339099411	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258636	70358901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70357251
m54284U_201203_174622/26543753/ccs	chr1	-	7496	25	NIC	ENSMUSG00000033364.14	novel	4974	26	NA	NA	-329	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_24	45.4335404434017	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAGTTTGATTTATTTG	NA	False	NA	-1	True	ATTAAA	-16	NA	74545771	74474669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74499073_74499140_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74545308
m54284U_201203_174622/26544931/ccs	chr17	+	3422	17	NIC	ENSMUSG00000001228.15	novel	529	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	576.900551303039	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1506	False	NA	36	True	AATAAA	-20	NA	56611406	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56611484_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201203_174622/26609687/ccs	chr3	-	3795	28	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-245	combination_of_known_junctions	FALSE	canonical	3	140	junction_2	261.419901467738	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3507	False	NA	-4	True	AATATA	-14	NA	89959822	89907844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201203_174622/26609999/ccs	chr11	-	5277	14	NNC	ENSMUSG00000020173.18	novel	5451	15	NA	NA	99	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_13	133.536733416681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414653	12186677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414542
m54284U_201203_174622/26673665/ccs	chr17	-	1963	6	Fusion	ENSMUSG00000083534.2_ENSMUSG00000064308.11	novel	1034	5	NA	NA	0	1844	multi-exon	FALSE	canonical	3	20	junction_5	56.5954061739997	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37292129	37278242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37292031
m54284U_201203_174622/26673815/ccs	chr3	-	2643	11	NIC	ENSMUSG00000074238.7	novel	2662	10	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	179.530192446842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTGCATCATGGCTT	NA	False	NA	-16	True	AATAAA	-16	NA	127631110	127600660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127628512_127628544_127630797
m54284U_201203_174622/26674047/ccs	chr6	-	2958	11	NIC	ENSMUSG00000055799.14	novel	3042	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	122.761598230065	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTCTCTGGATGTTTCT	4823	False	NA	-8	True	AATAAA	-14	NA	72766237	72603360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72765193_72765322_72765544_72765609_72765692
m54284U_201203_174622/26738958/ccs	chr6	-	4177	22	NIC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	521	junction_16	53.4311602802044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	3	True	NA	-2	True	TTTAAA	-5	NA	29609622	29540825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
m54284U_201203_174622/26740116/ccs	chr15	-	1206	8	NNC	ENSMUSG00000022474.16	novel	1300	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_7	366.457113898108	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGTTTGCTCTGTC	NA	False	NA	-3	True	ATTAAA	-14	NA	81845070	81835308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842079_81844915
m54284U_201203_174622/26741578/ccs	chr2	+	4560	18	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	87.2084167868991	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	NA	False	NA	18	True	AATAAA	-22	NA	90575947	90611365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598196_90598300_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
m54284U_201203_174622/26871141/ccs	chr3	-	2100	1	Intergenic	novelGene_1365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTCCTCCTTTGCAAGC	594	False	NA	NA	False	NA	NA	NA	27239976	27237876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_27237900_27240000
m54284U_201203_174622/26871389/ccs	chrX	+	6355	9	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	0	-166	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	37.5998670210414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACCATGTCTCTTAGA	NA	False	NA	13	True	ATTAAA	-25	NA	84617627	84677909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_84617929_84619155_84619217_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
m54284U_201203_174622/2689232/ccs	chr4	-	2693	6	NNC	ENSMUSG00000066000.13	novel	2594	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	226.990748710162	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTTGCTTGTTTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	147726970	147696393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_147698506_147699736_147699864_147702873_147702956_147706414_147706543_147725368_147725463_147726820
m54284U_201203_174622/2689448/ccs	chr14	+	1825	8	NIC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	66.9044399246616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTAGCATTTGTTTATT	NA	False	NA	5	True	AATAAA	-24	NA	118374569	118400673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118395308_118395467_118397404_118397597_118398968_118399047_118400000
m54284U_201203_174622/26935360/ccs	chr3	-	2353	10	NIC	ENSMUSG00000028114.17	novel	2741	11	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	3	34	junction_1	76.5041756304118	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTTTGTTTTCCTTAGA	NA	False	NA	-2	True	AATAAA	-17	NA	123179580	123161945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_123163340_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
m54284U_201203_174622/26935642/ccs	chr1	+	2467	21	NNC	ENSMUSG00000026187.10	novel	2549	21	NA	NA	78	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	150.316291532222	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTGTGTGAAGTCTCA	400	False	NA	22	True	TATAAA	-28	NA	72346663	72434111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_72346727_72349597_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
m54284U_201203_174622/27002141/ccs	chr4	+	4730	11	NIC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	731	junction_10	1124.40037353249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575826	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641924
m54284U_201203_174622/27003662/ccs	chr5	+	4879	27	NIC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	59.1746612372591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTGTTCTGGTTTCTA	NA	False	NA	20	True	ATTAAA	-20	NA	114518893	114559229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_114519037_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
m54284U_201203_174622/27068302/ccs	chr1	+	199	1	Intergenic	novelGene_133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGACTGGGCTGGGTGT	NA	False	NA	NA	False	NA	NA	NA	58495681	58495880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_58495700_58495900
m54284U_201203_174622/27133103/ccs	chr5	+	6182	38	NIC	ENSMUSG00000034573.15	novel	7915	48	NA	NA	0	-15430	combination_of_known_splicesites	FALSE	canonical	3	9	junction_17	12.7567567567568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCCTGTTGTTGTTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	103573057	103730739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604
m54284U_201203_174622/27133425/ccs	chr2	+	295	1	Intergenic	novelGene_932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTTTCCTTTTACTACCA	NA	False	NA	NA	False	NA	NA	NA	91496201	91496496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91496200_91496500
m54284U_201203_174622/27330958/ccs	chr18	-	174	1	Intergenic	novelGene_8883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	771	False	NA	NA	False	NA	NA	NA	35214284	35214110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35214100_35214300
m54284U_201203_174622/27331106/ccs	chr6	-	1822	8	NNC	ENSMUSG00000005667.9	novel	2085	8	NA	NA	422	-292	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	880.556062719369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTGTGTGTCTGTTTT	NA	False	NA	-3	True	TTTAAA	-23	NA	83294113	83282964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83293906
m54284U_201203_174622/27461444/ccs	chr10	+	3765	16	ISM	ENSMUSG00000069601.15	ENSMUST00000182029.8	3825	19	14	15057	0	1045	5prime_fragment	FALSE	canonical	3	68	junction_4	11.2853887837327	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAGCGCAATGTTGTGTG	NA	False	NA	NA	False	ATTAAA	-26	NA	69761648	69836578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_69762022_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184
m54284U_201203_174622/27526212/ccs	chr1	-	4875	26	NIC	ENSMUSG00000040648.16	novel	5882	28	NA	NA	319	-95	combination_of_known_splicesites	FALSE	canonical	0	0	junction_16	59.794367627729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTATTTGTGTTCTTT	9153	False	NA	-17	True	ATTAAA	-35	NA	97697817	97633867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97697579
m54284U_201203_174622/2754778/ccs	chr8	-	4734	26	NNC	ENSMUSG00000003316.15	novel	7021	26	NA	NA	0	823	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_11	92.5665166245333	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCTCCTTTCTGT	6428	False	NA	-22	True	ATTAAA	-22	NA	111985848	111883333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897945_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
m54284U_201203_174622/2754796/ccs	chr10	+	1467	10	NNC	ENSMUSG00000020085.16	novel	1512	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	53.3828473862319	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCTGGAGCTTTTATTTT	NA	False	NA	8	True	AATAAA	-19	NA	61551089	61574432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571233_61571438_61572361_61572538_61574177
m54284U_201203_174622/27590945/ccs	chr7	+	2480	2	NNC	ENSMUSG00000109511.2	novel	2708	2	NA	NA	718	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACTTGCTGTGAGT	468	False	NA	13	True	AATAAA	-13	NA	44468578	44480228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_44468741_44477910
m54284U_201203_174622/27591003/ccs	chr11	-	191	1	Intergenic	novelGene_5893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCGCAAGGGTAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	61026184	61025993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_61026000_61026200
m54284U_201203_174622/27658445/ccs	chr9	+	5657	28	NNC	ENSMUSG00000032481.18	novel	5773	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_23	253.977224819517	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCATTCTCTGCATTCAT	2502	False	NA	24	True	AATAAA	-24	NA	109961104	110069246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035069_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
m54284U_201203_174622/27658845/ccs	chr2	+	1488	12	NIC	ENSMUSG00000027374.13	novel	718	5	NA	NA	-74	130	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	397.120336904912	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACATGGTATATAGCTGT	7112	False	NA	26	True	AATAAA	-23	NA	127432286	127445905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_127432402_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
m54284U_201203_174622/27722150/ccs	chr9	+	7682	25	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	63.0103607000909	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335334	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_118335626_118343247_118343338_118348153_118348253_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
m54284U_201203_174622/27788798/ccs	chr8	+	1366	7	NIC	ENSMUSG00000031671.12	novel	1707	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	132.221720353856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAACTTTCTTTAGCAC	NA	False	NA	39	True	AATAAA	-26	NA	96442542	96445638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_96442592_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
m54284U_201203_174622/27852913/ccs	chr8	+	1696	7	NNC	ENSMUSG00000031792.16	novel	1758	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	68.6601938696813	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	False	NA	12	True	AATAAA	-13	NA	96058952	96074135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_96059094_96059995_96060163_96065261_96065446_96069770_96069804_96070584_96070691_96071916_96072001_96073154
m54284U_201203_174622/27854136/ccs	chr2	-	3055	16	NNC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	163.970647779819	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652910	93525975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93650379_93650495_93651954_93652027_93652731
m54284U_201203_174622/28050876/ccs	chr1	-	2123	12	NIC	ENSMUSG00000053483.16	novel	2219	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_3	156.020077114485	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTTCATGTTTGTATT	NA	False	NA	NA	False	AATAAA	-16	NA	171115532	171109522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113922_171114544_171115334
m54284U_201203_174622/28115096/ccs	chrX	+	207	1	Intergenic	novelGene_9482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATCCTTTACACA	NA	False	NA	NA	False	NA	NA	NA	59259526	59259733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_59259500_59259700
m54284U_201203_174622/28181675/ccs	chr17	-	5687	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_19	65.4612866922249	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503107	32415247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503036
m54284U_201203_174622/2819685/ccs	chr2	+	2811	13	NIC	ENSMUSG00000026718.18	novel	5000	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	64.5213143077542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATTCTGATTTTGTTT	4692	False	NA	27	True	ATTAAA	-29	NA	14078918	14152351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_14079148_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
m54284U_201203_174622/28247567/ccs	chr5	-	196	1	Intergenic	novelGene_2833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCGCACACTCCTGGACCA	NA	False	NA	NA	False	NA	NA	NA	118970412	118970216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_118970200_118970400
m54284U_201203_174622/28311828/ccs	chr17	+	174	1	Intergenic	novelGene_8517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTGGGTTTATTC	6747	False	NA	NA	False	NA	NA	NA	32291537	32291711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_32291500_32291700
m54284U_201203_174622/28510050/ccs	chr15	-	3224	14	NIC	ENSMUSG00000033565.19	novel	6907	14	NA	NA	0	1151	combination_of_known_junctions	FALSE	canonical	3	116	junction_12	32.8971860813506	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGCATCCTTTTGTAAGC	NA	False	NA	0	True	ATTAAA	-21	NA	77190805	76966537	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
m54284U_201203_174622/28510781/ccs	chr5	+	4157	10	NIC	ENSMUSG00000029528.20	novel	3706	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	245	junction_6	21.2811862660165	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTATTTCTTGGGA	NA	False	NA	19	True	AATAAA	-23	NA	115644769	115694046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690905_115691036_115691186_115691927
m54284U_201203_174622/28704877/ccs	chr7	+	4077	7	NIC	ENSMUSG00000059851.16	novel	2774	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	599	junction_4	48.5297732210742	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_4744981_4745120_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
m54284U_201203_174622/28705217/ccs	chr16	-	3012	14	NNC	ENSMUSG00000045975.9	novel	6556	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_10	21.7981596313452	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAAGTGTGTTCTATGCA	NA	False	NA	-4	True	ATTAAA	-13	NA	97723833	97659949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687408_97691213_97691319_97693389_97693510_97713805_97713905_97723254
m54284U_201203_174622/28706415/ccs	chr14	+	234	1	Intergenic	novelGene_7473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGCATATACTAAATAGAT	NA	False	NA	NA	False	CATAAA	-17	NA	56058831	56059065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_56058800_56059100
m54284U_201203_174622/28706995/ccs	chr4	-	790	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_3	2289.39637459309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994325	150981589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150991496_150991599_150992774_150992881_150994239
m54284U_201203_174622/28707557/ccs	chr18	-	2826	17	NNC	ENSMUSG00000024359.11	novel	3049	17	NA	NA	0	-219	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_13	1563.32118296073	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGTGAATGGTGAT	199	False	NA	-11	True	AATAAA	-19	NA	35087410	35070685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082191_35084276_35084459_35085448_35085537_35085729_35085789_35087222
m54284U_201203_174622/28770569/ccs	chr4	+	4089	18	NIC	ENSMUSG00000028613.16	novel	2531	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_6	22.8239842283367	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659457	107731096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107707300_107707340_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
m54284U_201203_174622/28770679/ccs	chr2	+	3839	4	NIC	ENSMUSG00000027160.17	novel	2070	6	NA	NA	0	2290	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	239.137803136369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTCTAAATTTTATGT	NA	False	NA	NA	False	AATAAA	-20	NA	109848161	110005995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_109848560_109852226_109852360_109862676_109862785_110002795
m54284U_201203_174622/28772457/ccs	chr4	-	2028	9	NIC	ENSMUSG00000028923.15	novel	1906	8	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_4	200.893628569947	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGATGGATATGTTTTT	8500	False	NA	-10	True	AATAAA	-22	NA	140805653	140793822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_140794924_140795505_140795591_140797366_140797545_140798891_140799029_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
m54284U_201203_174622/28836146/ccs	chr10	-	5356	3	NIC	ENSMUSG00000048756.12	novel	6848	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	54.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAGGAGTCTGTCATC	NA	False	NA	-2	True	AATAAA	-22	NA	42152692	42057836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_42062292_42150811_42151542_42152521
m54284U_201203_174622/2884204/ccs	chr12	-	3185	13	NNC	ENSMUSG00000047534.18	novel	4017	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_12	101.824467699184	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTGGGTTTGTT	NA	False	NA	-5	True	AATAAA	-18	NA	65219378	65179507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205406_65219222
m54284U_201203_174622/28902010/ccs	chr12	+	2963	1	FSM	ENSMUSG00000020950.11	ENSMUST00000179669.3	3973	1	1016	-6	892	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATATTTTTGTCTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	49430681	49433644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_49430700_49433600
m54284U_201203_174622/28969153/ccs	chr2	-	2240	12	NIC	ENSMUSG00000026672.12	novel	2614	14	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_11	42.3488073929279	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTATCTGATTTATT	NA	False	NA	0	True	AGTAAA	-17	NA	5068862	5025452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5068717
m54284U_201203_174622/29032941/ccs	chr7	-	2242	1	Antisense	novelGene_ENSMUSG00000037640.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	27449142	27446900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_27446900_27449100
m54284U_201203_174622/29098074/ccs	chr14	-	3932	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7200	intron_retention	FALSE	canonical	3	18	junction_14	170.901612371303	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGTTTAGGAAATAATC	NA	False	NA	-1	True	AATAAA	-18	NA	62998587	62930452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951289_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
m54284U_201203_174622/29098364/ccs	chr2	+	2699	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	983	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_3	820.256858312972	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896542	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904386_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201203_174622/29098496/ccs	chr11	+	3636	5	NIC	ENSMUSG00000070345.4	novel	4158	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.32290411644765	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCTTGGTTGTTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	87507989	87550368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87508732_87513570_87513946_87522417_87522516_87528895_87529071_87548122
m54284U_201203_174622/29163718/ccs	chr2	+	7690	14	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_13	210.490045302854	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
m54284U_201203_174622/29163884/ccs	chr14	+	7864	31	NIC	ENSMUSG00000042323.18	novel	7907	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	53.929882460675	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8215	False	NA	14	True	AATAAA	-21	NA	30741094	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30744676_30744817_30745023_30745137_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30838969_30839041_30839156_30839374_30840685
m54284U_201203_174622/29164694/ccs	chr8	+	185	1	Intergenic	novelGene_4584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTGTTGCTGGATGTA	NA	False	NA	NA	False	NA	NA	NA	124104305	124104490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_124104300_124104500
m54284U_201203_174622/29165905/ccs	chr19	-	1891	6	NNC	ENSMUSG00000024970.6	novel	3152	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	17	junction_1	121.287097417656	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGGGCTATCATT	NA	False	NA	NA	False	AATAAA	-21	NA	7360359	7335050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_7335815_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
m54284U_201203_174622/29229253/ccs	chr13	-	194	1	Intergenic	novelGene_7038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAAAACCGAAAAACAGT	NA	False	NA	NA	False	NA	NA	NA	43496858	43496664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_43496700_43496900
m54284U_201203_174622/29229479/ccs	chr9	-	8347	24	NIC	ENSMUSG00000046111.19	novel	7605	28	NA	NA	0	1799	intron_retention	FALSE	canonical	3	87	junction_2	27.1516082372237	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGGGTAATTATTTT	9707	False	NA	NA	False	AATAAA	-17	NA	15269084	15232495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_15234380_15234864_15235010_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
m54284U_201203_174622/29229644/ccs	chr2	+	3474	20	NIC	ENSMUSG00000027624.21	novel	6521	22	NA	NA	234	857	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	36.3078557313928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATAATTACCTGACTG	5080	False	NA	22	True	AATAAA	-32	NA	156317687	156382763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156317927_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
m54284U_201203_174622/29231162/ccs	chr14	-	1644	10	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-117	-111	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_9	1300.67618691582	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746322	63729906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63745124_63745218_63746158
m54284U_201203_174622/29296307/ccs	chr11	+	3517	6	NIC	ENSMUSG00000020897.13	novel	1831	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	581	junction_1	41.6672533292033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGGTGGTCTGAATAT	NA	False	NA	16	True	AATAAA	-26	NA	68936472	68942490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939471_68939556_68941303_68941725
m54284U_201203_174622/29297247/ccs	chr11	-	8072	22	NIC	ENSMUSG00000017146.13	novel	6572	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	266	junction_5	36.6692021386821	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACAAAGAATGACTGA	NA	False	NA	-11	True	AATAAA	-15	NA	101442705	101379589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101426432_101430806_101430861_101439840_101439940_101442594
m54284U_201203_174622/29297386/ccs	chr10	-	176	1	Intergenic	novelGene_5270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATTAAAAGAAA	5922	False	NA	NA	False	NA	NA	NA	40129106	40128930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_40128900_40129100
m54284U_201203_174622/29297468/ccs	chr13	+	185	1	Intergenic	novelGene_7097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTAAAAAAATAATATTAT	3451	False	NA	NA	False	NA	NA	NA	55408534	55408719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55408500_55408700
m54284U_201203_174622/29360525/ccs	chr17	-	4594	8	NNC	ENSMUSG00000062078.16	novel	8547	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	404.126369405635	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTATGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	10538309	10425479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_10428561_10432287_10432363_10435088_10435386_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
m54284U_201203_174622/29361595/ccs	chrX	+	3919	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	82	0	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_12	234.116082883364	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118946	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133287_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/29362478/ccs	chr5	+	173	1	Intergenic	novelGene_2675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAGGTTTAAAAATG	5926	False	NA	NA	False	NA	NA	NA	92815330	92815503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92815300_92815500
m54284U_201203_174622/29427228/ccs	chr11	-	5918	27	NIC	ENSMUSG00000018068.14	novel	5906	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_24	54.4039243276486	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTAGCTTTTATGTTTTAT	NA	False	NA	NA	False	TATAAA	-22	NA	86148401	86101506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86147247_86147324_86148029_86148242_86148330
m54284U_201203_174622/29493430/ccs	chr13	-	3715	5	NNC	ENSMUSG00000113204.2	novel	1049	11	NA	NA	18642	3077	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	30.2200264725232	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	74739511	74724399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_74727579_74728971_74729033_74729232_74729360_74731765_74731993_74739390
m54284U_201203_174622/2949551/ccs	chr9	-	185	1	Intergenic	novelGene_4919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAGGAAAAAGAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	71458381	71458196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_71458200_71458400
m54284U_201203_174622/2949714/ccs	chr8	+	2211	8	NNC	ENSMUSG00000031799.11	novel	2044	8	NA	NA	57	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	253.461424831376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGATTTATTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	72889708	72906984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_72889989_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
m54284U_201203_174622/29556888/ccs	chr4	+	4644	14	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_7	82.94619343838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	-25	True	NA	19	True	AGTAAA	-16	NA	11558921	11615805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601632_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11612439_11612617_11612819_11615442
m54284U_201203_174622/29557626/ccs	chr11	+	3769	22	NIC	ENSMUSG00000020898.19	novel	3978	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	97.9944697407626	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTTCATCTCTGAGGT	5272	False	NA	21	True	AATAAA	-21	NA	68906922	68927299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_68906992_68911855_68912020_68913202_68913441_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
m54284U_201203_174622/29559379/ccs	chr11	+	6200	18	NIC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-296	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_14	36.4238790072902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAGAAAAAGGAAATC	NA	False	NA	NA	False	NA	NA	NA	98093588	98169330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535_98140927_98154295_98154397_98155019_98155134_98158577_98158685_98168196
m54284U_201203_174622/29559633/ccs	chr11	-	3214	16	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_4	509.466186861852	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106552827_106552851_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
m54284U_201203_174622/29689452/ccs	chr4	+	7793	32	NIC	ENSMUSG00000038024.18	novel	7940	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_19	10.1503781653229	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTCTGTTGAATTTC	8171	False	NA	NA	False	AATAAA	-16	NA	86666791	86768840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
m54284U_201203_174622/29690397/ccs	chr2	+	191	1	Intergenic	novelGene_1127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGCAGATTCAGAACC	NA	False	NA	NA	False	NA	NA	NA	152515567	152515758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_152515600_152515800
m54284U_201203_174622/29753888/ccs	chr19	-	2741	16	NIC	ENSMUSG00000024941.10	novel	2586	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	227	junction_11	26.5190916553004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTCCCAGCTCAGTC	9907	False	NA	-11	True	AATAAA	-13	NA	5821429	5808454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
m54284U_201203_174622/29754535/ccs	chr3	+	5032	5	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	0	-503	intron_retention	FALSE	canonical	3	151	junction_3	124.547932540047	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACATTATTGGTCCTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	16237399	16270516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16259589_16268118
m54284U_201203_174622/29754598/ccs	chr5	+	3802	23	NIC	ENSMUSG00000029407.11	novel	3898	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	134.833329928116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGTCATTGTTCCCT	NA	False	NA	13	True	AATAAA	-21	NA	92285796	92350657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92347675_92347784_92348993_92349210_92349715
m54284U_201203_174622/29755762/ccs	chr6	-	2220	15	NIC	ENSMUSG00000015112.16	novel	616	4	NA	NA	0	169	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	212.439631280925	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGTGTTATTGTTTAT	NA	False	NA	-3	True	AATAAA	-20	NA	6217173	6068097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_6068700_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110025_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263_6191318_6216995
m54284U_201203_174622/29819454/ccs	chr4	+	1872	6	ISM	ENSMUSG00000028280.10	ENSMUST00000029947.6	2286	10	19822	0	19822	0	3prime_fragment	FALSE	canonical	3	14	junction_2	4.22374241638857	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGATGTCATCACTGACT	NA	False	NA	8	True	AATAAA	-15	NA	33152342	33163588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
m54284U_201203_174622/29820035/ccs	chr9	+	2606	20	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	0	-682	combination_of_known_junctions	FALSE	canonical	3	118	junction_1	53.5567113407824	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695997	14745260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
m54284U_201203_174622/29884847/ccs	chr11	-	2256	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	154.867151813236	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTATCTTCCCAGGCT	NA	False	NA	-27	True	AATAAA	-19	NA	6576067	6566422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6576022
m54284U_201203_174622/29949971/ccs	chr4	+	3371	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	149.446598202454	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096259	154105970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104655_154104679
m54284U_201203_174622/29951501/ccs	chr8	+	174	1	Intergenic	novelGene_4326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	71093904	71094078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_71093900_71094100
m54284U_201203_174622/29952305/ccs	chr9	-	4359	14	NIC	ENSMUSG00000032217.14	novel	4880	15	NA	NA	0	-457	combination_of_known_junctions	FALSE	canonical	3	68	junction_2	77.5959798873276	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTCTTGTTTTATTTC	2246	False	NA	-1	True	AATAAA	-15	NA	70411007	70333168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410740
m54284U_201203_174622/30016650/ccs	chr7	+	303	1	Intergenic	novelGene_3799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAAACACTTAGA	NA	False	NA	NA	False	NA	NA	NA	39090092	39090395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_39090100_39090400
m54284U_201203_174622/30081375/ccs	chr2	+	3975	14	NIC	ENSMUSG00000006476.20	novel	2922	15	NA	NA	0	0	intron_retention	TRUE	canonical	1	2	junction_10	1.86528548507418	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGGGTCTTCTC	9554	False	NA	2	True	ATTAAA	-18	NA	24944418	24952893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
m54284U_201203_174622/30082545/ccs	chr3	+	1969	16	NNC	ENSMUSG00000027680.16	novel	2129	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_13	330.912972782204	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	4849	False	NA	20	True	ATTAAA	-23	NA	34074246	34123494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34116054_34116181_34118267_34118469_34123065
m54284U_201203_174622/30083191/ccs	chr5	-	3227	19	NNC	ENSMUSG00000029119.10	novel	3330	19	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_10	51.6278229132842	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCATGTTCAAGCCAGA	1001	False	NA	-13	True	AATAAA	-21	NA	36987945	36964264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973537_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
m54284U_201203_174622/30083336/ccs	chr11	+	2189	11	NIC	ENSMUSG00000037243.18	novel	1887	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_1	35.6712769606023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATAAGAATCTGGGAGT	7673	False	NA	28	True	AATAAA	-35	NA	58197894	58205453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
m54284U_201203_174622/30212241/ccs	chr12	+	3982	15	NNC	ENSMUSG00000021109.14	novel	4724	15	NA	NA	99	-646	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_1	100.579545127025	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGGCCCCCTGGGTCAG	8457	False	NA	12	True	AATAAA	-12	NA	73954776	73993658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_73955099_73973327_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
m54284U_201203_174622/30212455/ccs	chrX	-	5093	6	NNC	ENSMUSG00000046449.16	novel	10891	5	NA	NA	-404	2753	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	11.6275534829989	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTATGAGTATAATGTG	NA	False	NA	NA	False	AATAAA	-6	NA	103245195	103124566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_103124709_103126759_103126890_103127461_103131837_103132486_103132613_103244238_103244478_103245114
m54284U_201203_174622/30212688/ccs	chr7	-	4584	25	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	144.324768799014	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGATGGGGCATCTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	125799594	125700887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125701563_125702250_125702363_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
m54284U_201203_174622/30213486/ccs	chr5	+	2048	11	ISM	ENSMUSG00000063646.19	ENSMUST00000121010.9	2496	20	5710	22702	0	0	internal_fragment	FALSE	canonical	3	147	junction_1	11.74265728019	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	2480	False	NA	17	True	AATAAA	-20	NA	37248423	37282643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
m54284U_201203_174622/30280244/ccs	chr14	+	3617	21	NNC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	57.9711134962923	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTTTAATGTCCAGAA	NA	False	NA	17	True	AATAAA	-22	NA	31058631	31093943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_31058941_31061991_31062101_31066398_31066561_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
m54284U_201203_174622/30344360/ccs	chr12	+	7035	7	NNC	ENSMUSG00000035133.10	novel	9323	7	NA	NA	0	824	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_1	83.7842798832547	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTGACTTGTGTTTGT	NA	False	NA	14	True	ATTAAA	-23	NA	52550798	52616442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
m54284U_201203_174622/30409100/ccs	chr11	-	2260	13	NIC	ENSMUSG00000025137.16	novel	1881	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	184	junction_6	81.3758000472704	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTAGGCTCCCGACCCC	NA	False	NA	-6	True	AATAAA	-16	NA	120508762	120500912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
m54284U_201203_174622/30475267/ccs	chr4	-	3139	15	NIC	ENSMUSG00000028484.17	novel	3251	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	514.146950525522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTATTAGTAAGTTATTAT	NA	False	NA	-4	True	ATTAAA	-16	NA	83404696	83373916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_83375317_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
m54284U_201203_174622/30540987/ccs	chr11	+	3590	25	NIC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	31.2925266193419	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTTGCTGGGGTCA	3478	False	NA	14	True	AATAAA	-22	NA	85243992	85716884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_85244060_85245419_85245488_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85716027
m54284U_201203_174622/30541631/ccs	chr2	+	6761	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3665	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	47.8510971661048	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	7809	False	NA	11	True	AATAAA	-13	NA	59606389	59676059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_59606661_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
m54284U_201203_174622/30542262/ccs	chr4	-	3602	21	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_18	87.4819981481905	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGCTTCCTGTTCCTTG	7420	False	NA	-6	True	TATAAA	-12	NA	155753655	155739139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745645_155745779_155745832_155751470_155751627_155753030
m54284U_201203_174622/30606436/ccs	chr2	+	4429	13	NIC	ENSMUSG00000005506.17	novel	4432	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	232.925357619608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839546_90839661_90843043_90843188_90843582_90843748_90846910
m54284U_201203_174622/30606789/ccs	chr6	+	4169	30	NIC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_24	77.5973785060468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185055	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201203_174622/3080811/ccs	chr6	+	2623	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	267.552229584348	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_125108993_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
m54284U_201203_174622/3080996/ccs	chrX	+	4138	12	NIC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_9	153.898914983368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315714	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
m54284U_201203_174622/3082224/ccs	chr5	-	170	1	Intergenic	novelGene_2450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAATAAAGGTAATAG	NA	False	NA	NA	False	NA	NA	NA	3518921	3518751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_3518800_3518900
m54284U_201203_174622/30869585/ccs	chr3	+	4681	5	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	0	231	intron_retention	FALSE	canonical	3	1289	junction_1	339.389525471839	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCTTTTAGACAACTA	NA	False	NA	12	True	AATAAA	-13	NA	138233045	138262206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_138233076_138252081_138252189_138253419_138256768_138259342_138259483_138261150
m54284U_201203_174622/31000157/ccs	chr7	+	2962	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_13	288.475240333922	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944226	79966007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79963274_79963317_79964861
m54284U_201203_174622/31065703/ccs	chr9	-	3726	7	NIC	ENSMUSG00000036986.17	novel	4343	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	142.191674236652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2151	False	NA	-13	True	NA	NA	NA	58157069	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_58127853_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
m54284U_201203_174622/31131075/ccs	chr2	+	3571	12	NIC	ENSMUSG00000026926.15	novel	3135	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1351	junction_7	108.388496233237	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGATGCCCCTAGGTGT	653	False	NA	19	True	AATAAA	-16	NA	26279359	26287134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
m54284U_201203_174622/31195283/ccs	chr5	-	3710	17	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	0	-690	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	88.2397302806395	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTGCCTTGCTTATTAC	NA	False	NA	-5	True	ATTAAA	-22	NA	23881012	23711139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_23712719_23718487_23718581_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
m54284U_201203_174622/31195499/ccs	chr7	+	3470	22	NIC	ENSMUSG00000030400.18	novel	3578	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_1	34.8788639062727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTTTGCTTCTGATAT	NA	False	NA	13	True	AATAAA	-21	NA	19115942	19129619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_19115985_19117868_19117947_19118023_19118087_19118226_19118341_19119547_19119665_19119754_19119872_19120631_19120756_19120856_19120954_19121037_19121172_19121253_19121423_19122064_19122184_19124031_19124102_19124173_19124244_19124323_19124426_19125451_19125516_19125889_19126012_19127173_19127267_19127357_19127431_19127554_19127626_19127700_19127845_19127963_19128108_19128276
m54284U_201203_174622/31196360/ccs	chr11	+	202	1	Intergenic	novelGene_6273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAAGCCTTGACAGTAAC	1518	False	NA	NA	False	NA	NA	NA	97317372	97317574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97317400_97317600
m54284U_201203_174622/31196596/ccs	chr13	+	2394	13	NIC	ENSMUSG00000039242.11	novel	2439	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_12	55.6334107249312	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGACTCACTTCAAC	NA	False	NA	NA	False	AATAAA	-34	NA	14129209	14173671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171610_14172963
m54284U_201203_174622/31261731/ccs	chr7	-	1776	11	NNC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_8	402.203443545676	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994796_18998450_18998496_18998578_18998751_19005438
m54284U_201203_174622/31262335/ccs	chr9	-	2248	9	NIC	ENSMUSG00000020253.16	novel	1846	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	111	junction_3	11.9556472012183	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	3843	False	NA	-4	True	NA	NA	NA	106076474	106072149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106075196_106075299_106075424_106076168
m54284U_201203_174622/31326710/ccs	chr8	-	7681	49	NIC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_46	305.67686094301	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
m54284U_201203_174622/31392027/ccs	chr13	+	3179	25	NIC	ENSMUSG00000021193.11	novel	3318	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_9	216.628422105431	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTTACTCATTATT	NA	False	NA	16	True	TATAAA	-17	NA	6598194	6630078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
m54284U_201203_174622/31457433/ccs	chr16	+	3937	1	Antisense	novelGene_ENSMUSG00000022983.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTACAGGTCCTGCCTCG	NA	False	NA	NA	False	NA	NA	NA	90039324	90043261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_+_90039300_90043300
m54284U_201203_174622/31457586/ccs	chr14	+	4362	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_2	244.809506442141	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGTTGTTGTTCCCT	NA	False	NA	9	True	AATAAA	-21	NA	34395884	34468176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_34396318_34398910_34399207_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
m54284U_201203_174622/31460128/ccs	chr13	+	3260	8	NNC	ENSMUSG00000059288.15	novel	3470	10	NA	NA	-2855	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_1	86.1488981534948	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35922440	36058046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_35922622_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
m54284U_201203_174622/31525557/ccs	chr18	+	3958	21	NIC	ENSMUSG00000024260.15	novel	400	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	43.0866568672948	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	7519	False	NA	8	True	AATAAA	-20	NA	31768137	31856114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_31768185_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
m54284U_201203_174622/31589666/ccs	chr14	-	180	1	Intergenic	novelGene_7556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCATTCTCCTAGAATT	NA	False	NA	NA	False	NA	NA	NA	79625934	79625754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_79625800_79625900
m54284U_201203_174622/31591041/ccs	chr6	+	616	5	NNC	ENSMUSG00000108175.2	novel	2065	5	NA	NA	26227	-9172	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	6.80073525436772	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTCTTGTTCTGTTTT	NA	False	NA	NA	False	NA	NA	NA	53821954	53835996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_53822096_53828082_53828119_53834180_53834359_53835502_53835591_53835823
m54284U_201203_174622/31591044/ccs	chr6	+	2692	15	NIC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	728	junction_3	40.8296610871288	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
m54284U_201203_174622/31653952/ccs	chr1	+	3140	8	NNC	ENSMUSG00000026622.16	novel	3227	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_7	134.022233915397	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGATGTTTGTATTCT	NA	False	NA	29	True	TATAAA	-40	NA	191553621	191565162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563269
m54284U_201203_174622/31654401/ccs	chr5	+	8764	49	ISM	ENSMUSG00000038011.16	ENSMUST00000058440.12	14038	79	49720	0	-11748	0	3prime_fragment	TRUE	canonical	0	0	junction_1	2.62127712193885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGTTTTGGTTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	124851868	124911372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_124852310_124852408_124852593_124854222_124854358_124854880_124855034_124856147_124856337_124859331_124859479_124860891_124861084_124862211_124862331_124864380_124864540_124866825_124866962_124868730_124868854_124870876_124871012_124871289_124871507_124873304_124873425_124874969_124875116_124875953_124876107_124877860_124878122_124878776_124878950_124880371_124880466_124880877_124881046_124881695_124881885_124882801_124882974_124885718_124885923_124886277_124886359_124888512_124888711_124889624_124889787_124890885_124891061_124891613_124891796_124893070_124893208_124894245_124894464_124894623_124894846_124895052_124895201_124896194_124896475_124896893_124897124_124898286_124898561_124899915_124900021_124900361_124900517_124901497_124901653_124903930_124904115_124905079_124905281_124905498_124905709_124905836_124905933_124906588_124906761_124907091_124907224_124907390_124907603_124907696_124907865_124909513_124909695_124910488_124910635_124911042
m54284U_201203_174622/31655940/ccs	chr17	+	4173	11	NIC	ENSMUSG00000006705.14	novel	4252	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_7	43.5413596480404	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGATTCTGTAAAGCTT	NA	False	NA	29	True	ATTAAA	-22	NA	31783780	31826667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818494_31818618_31821759_31821837_31822160_31822334_31823726
m54284U_201203_174622/31720978/ccs	chr10	-	1531	10	NNC	ENSMUSG00000020069.17	novel	2213	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	143.298789980504	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGATGTTGCTACTTTT	5781	False	NA	-6	True	AATAAA	-15	NA	62859673	62851206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859416
m54284U_201203_174622/31722000/ccs	chr10	-	3896	22	NIC	ENSMUSG00000020329.13	novel	3755	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_19	44.9978583516574	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGAGACGCTGCGCTCGG	4709	False	NA	-7	True	NA	NA	NA	79582413	79571963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79579712_79579854_79581507_79581607_79582298
m54284U_201203_174622/31722326/ccs	chr2	+	5740	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-184	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	65.8485214547584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4612	False	NA	33	True	AATAAA	-25	NA	20524417	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20764357_20764463_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
m54284U_201203_174622/31785004/ccs	chr5	+	4886	15	NIC	ENSMUSG00000029267.18	novel	2675	16	NA	NA	-786	0	intron_retention	FALSE	canonical	0	0	junction_3	615.388316928624	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108225244	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108226295_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201203_174622/31850689/ccs	chr6	+	4066	11	NNC	ENSMUSG00000034430.17	novel	4126	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_8	37.2210961687052	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGCGCTGCTTTCATT	NA	False	NA	12	True	AATAAA	-25	NA	90346589	90380472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90376053_90376108_90377763_90377866_90379001
m54284U_201203_174622/31916067/ccs	chr1	+	1634	8	ISM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	1701	858	0	-858	3prime_fragment	FALSE	canonical	3	24	junction_7	3.01695886884898	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCCTGTCATCTTGACT	NA	False	NA	9	True	AATAAA	-20	NA	75338673	75344365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
m54284U_201203_174622/31917754/ccs	chr10	+	190	1	Intergenic	novelGene_5571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTTCTTAAGCTGG	NA	False	NA	NA	False	NA	NA	NA	120286280	120286470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_120286300_120286500
m54284U_201203_174622/31918680/ccs	chr2	-	2553	16	NNC	ENSMUSG00000027010.17	novel	6351	18	NA	NA	5559	-53	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_15	30.983436435188	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCTCCTCCTGATGAC	NA	False	NA	-5	True	AATAAA	-16	NA	71168817	71105086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71168501
m54284U_201203_174622/32113696/ccs	chrX	+	3495	1	NIC	ENSMUSG00000031060.17	novel	3698	24	NA	NA	0	-27919	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGCCCAGAAAGGCAAACC	555	False	NA	NA	False	NA	NA	NA	20484021	20487516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20484000_20487500
m54284U_201203_174622/32114208/ccs	chr12	-	4390	1	Intergenic	novelGene_6720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCCACGGAACGCGGC	NA	False	NA	NA	False	NA	NA	NA	73959520	73955130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_73955100_73959500
m54284U_201203_174622/32114775/ccs	chr8	+	5362	21	NNC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	81.8694692788466	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443037	3506601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_3443103_3475294_3475386_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
m54284U_201203_174622/32115403/ccs	chr7	-	2889	21	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	1234	junction_20	95.6375841392912	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153827	143111442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
m54284U_201203_174622/32115454/ccs	chr12	+	2324	15	NIC	ENSMUSG00000021288.20	novel	2504	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_13	40.1888399576656	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGTTCATAACTATTTT	NA	False	NA	NA	False	ATTAAA	-33	NA	111725282	111773160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111772441_111772509_111772748
m54284U_201203_174622/3211556/ccs	chr5	+	1928	9	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_3	1091.00412464848	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	756	False	NA	15	True	ATTAAA	-18	NA	77099623	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77099683_77104392_77104591_77107161_77107341_77109040_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201203_174622/32179673/ccs	chr1	+	3781	21	NIC	ENSMUSG00000041498.14	novel	8943	29	NA	NA	0	7565	intron_retention	FALSE	canonical	3	49	junction_13	8.08006806902021	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTGTGGTTTGCCT	NA	False	NA	NA	False	ATTAAA	-28	NA	136394080	136431219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_136394137_136395585_136396913_136399057_136399313_136401122_136401211_136404077_136404177_136406096_136406150_136406881_136406913_136407545_136407654_136410125_136410243_136410661_136410778_136414009_136414183_136414772_136414921_136415141_136415206_136417937_136418123_136422365_136422469_136423593_136423758_136424307_136424456_136425100_136425254_136427754_136427882_136430384_136430479_136431047
m54284U_201203_174622/32179954/ccs	chr10	-	5559	17	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	747	junction_3	144.624500323251	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTCTAGAATTTAT	NA	False	NA	-14	True	TATAAA	-14	NA	80269481	80245441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
m54284U_201203_174622/32180182/ccs	chr4	+	5097	21	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	103	junction_13	140.971131796549	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/32180678/ccs	chr16	+	5329	31	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	349.844282820546	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/32180750/ccs	chr10	-	198	1	Intergenic	novelGene_5428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCGGAACAAGCAGAGAG	2621	False	NA	NA	False	AATAAA	-10	NA	77566053	77565855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_77565900_77566100
m54284U_201203_174622/32244982/ccs	chr8	-	1683	5	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	230	junction_1	1663.49968064319	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760017	43748103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43749173_43749261_43749574_43753664_43753743_43757512_43757597_43759877
m54284U_201203_174622/32245297/ccs	chr19	+	2714	12	NNC	ENSMUSG00000018820.14	novel	2573	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	46.9397362900049	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTTGTCAGGTCTCCT	NA	False	NA	7	True	AATAAA	-14	NA	42159032	42180156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171842_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178043_42178821
m54284U_201203_174622/32245353/ccs	chr6	+	1006	7	NIC	ENSMUSG00000029911.15	novel	933	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	1009.70915779413	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448348	40457929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_40448770_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
m54284U_201203_174622/32311820/ccs	chr7	+	1136	11	NNC	ENSMUSG00000031068.9	novel	1685	11	NA	NA	0	-412	at_least_one_novel_splicesite	FALSE	canonical	3	234	junction_3	1056.66335225558	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTGCGTGTAGAA	NA	False	NA	29	True	AATAAA	-17	NA	137039384	137069911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_137039501_137046707_137046817_137054425_137054501_137055236_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
m54284U_201203_174622/32375073/ccs	chr2	-	6115	27	NIC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_12	35.4479366538837	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8072	False	NA	-5	True	AATAAA	-26	NA	121101888	121028731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
m54284U_201203_174622/32440908/ccs	chr17	-	6826	33	NIC	ENSMUSG00000013236.18	novel	6855	33	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_32	77.4089939461171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGCATGGAGTGCTCC	NA	False	NA	-5	True	ATTAAA	-16	NA	56769216	56719430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
m54284U_201203_174622/32441671/ccs	chrX	+	9617	46	NIC	ENSMUSG00000031010.18	novel	11887	45	NA	NA	0	1034	combination_of_known_junctions	FALSE	canonical	3	383	junction_14	188.080668272361	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTTGTCCTGTGGTA	823	False	NA	NA	False	AATAGA	-15	NA	12937752	13037171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_12937973_12938453_12938565_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982847_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
m54284U_201203_174622/32508269/ccs	chr5	-	4233	32	NIC	ENSMUSG00000060261.17	novel	4302	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_24	100.848295831473	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	654	False	NA	-6	True	AATAAA	-28	NA	134343581	134266690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
m54284U_201203_174622/32639467/ccs	chr17	+	3603	16	NIC	ENSMUSG00000001228.15	novel	3586	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1413	junction_6	326.105190936231	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	499	False	NA	36	True	AATAAA	-20	NA	56610399	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201203_174622/32702503/ccs	chr2	-	3615	6	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	146	junction_5	89.5419454780831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26278503_26278573_26279160
m54284U_201203_174622/32703379/ccs	chr11	+	4027	23	NIC	ENSMUSG00000005417.18	novel	8766	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	108.552735023083	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGGCCCCTCTCATTCCT	3585	False	NA	17	True	ATTAAA	-14	NA	59553332	59667049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
m54284U_201203_174622/32703906/ccs	chr9	-	189	1	Intergenic	novelGene_5055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGATAGGGAAGTAGAAG	NA	False	NA	NA	False	NA	NA	NA	104190912	104190723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_104190700_104190900
m54284U_201203_174622/32705035/ccs	chr3	-	168	1	Intergenic	novelGene_1346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAACACACAGG	NA	False	NA	NA	False	NA	NA	NA	9980205	9980037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_9980000_9980200
m54284U_201203_174622/32770556/ccs	chrX	+	4768	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	151	junction_10	170.123921775659	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158351011_158357940_158358094_158374327_158374354_158375066
m54284U_201203_174622/32770896/ccs	chr7	+	2026	12	NIC	ENSMUSG00000030822.16	novel	2175	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	49	junction_11	69.1986002820269	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTGACTCCTTTGTG	NA	False	NA	7	True	TATAAA	-12	NA	127070190	127075929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075615
m54284U_201203_174622/3278334/ccs	chr9	-	887	8	NIC	ENSMUSG00000032299.11	novel	858	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_3	347.483959400742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATGGGTCTTGCTTGC	6277	False	NA	-4	True	AATAAA	-15	NA	57065615	57062322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_57062565_57062695_57062873_57063185_57063296_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
m54284U_201203_174622/3278424/ccs	chr2	+	2715	12	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	24	junction_11	131.648354551807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210902	144249596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542_144248632_144249231
m54284U_201203_174622/327892/ccs	chr9	+	3939	19	NNC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	-101	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	81.3321379693579	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATCTGTAGCATTTCTG	9	True	NA	20	True	TATAAA	-21	NA	3404087	3479135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3440578_3440669_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
m54284U_201203_174622/3279309/ccs	chr15	-	3275	13	NIC	ENSMUSG00000022403.16	novel	3346	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_12	706.153208706628	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTTCCCCCATTT	NA	False	NA	-19	True	AATAAA	-18	NA	81284274	81247869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685_81283889_81283989
m54284U_201203_174622/328017/ccs	chr7	-	3093	6	NIC	ENSMUSG00000002608.9	novel	3032	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	47.4189835403502	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTCATCTGTTATGTAA	NA	False	NA	-3	True	ATTAAA	-24	NA	25418428	25410530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25416278_25416425_25418342
m54284U_201203_174622/32833746/ccs	chr2	+	5373	10	NIC	ENSMUSG00000027425.19	novel	3801	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	121	junction_9	84.9349787618973	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACTCAGCTTGTCTTT	NA	False	NA	40	True	NA	NA	NA	144210902	144249596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144244491_144245918_144246110_144248542
m54284U_201203_174622/32834048/ccs	chr4	+	4611	18	NIC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_3	170.362203193128	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/32834511/ccs	chr18	-	1701	5	NNC	ENSMUSG00000033032.16	novel	2842	16	NA	NA	49251	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	5.2618912949623	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCAGAGGGTAGCTGGC	NA	False	NA	1	True	AATAAA	-21	NA	61870431	61863331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870253
m54284U_201203_174622/32835159/ccs	chr3	+	2492	21	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	463.709486100942	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGTAAAGGATTCAT	NA	False	NA	43	True	AATAAA	-33	NA	151916118	151938426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
m54284U_201203_174622/32836317/ccs	chr15	+	2799	12	NIC	ENSMUSG00000051934.6	novel	3096	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	100.076582246046	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99024436	99111096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99024769_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
m54284U_201203_174622/32964679/ccs	chr4	+	2480	13	NNC	ENSMUSG00000028708.17	novel	2543	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	42.5606593255112	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGGCAGCCTTGGTGGT	NA	False	NA	10	True	AATAAA	-16	NA	115696417	115736447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_115696439_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
m54284U_201203_174622/32965112/ccs	chr11	+	7051	13	NIC	ENSMUSG00000017639.14	novel	677	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	20.8706332758097	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAACTTCTGTGGG	NA	False	NA	11	True	AATAAA	-22	NA	79551387	79588849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
m54284U_201203_174622/32967269/ccs	chr2	+	7266	20	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	-171	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_12	53.6257163264375	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4625	False	NA	33	True	AATAAA	-25	NA	20524430	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790279_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20810585_20812185_20812712_20812836_20813520
m54284U_201203_174622/32967511/ccs	chr14	-	188	1	Intergenic	novelGene_7345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGCTGGGCAGTGGTGG	NA	False	NA	NA	False	NA	NA	NA	20071023	20070835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_20070800_20071000
m54284U_201203_174622/33032340/ccs	chr9	+	8285	21	NNC	ENSMUSG00000044791.17	novel	7442	19	NA	NA	-3401	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	21.2388794431345	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCCTCAAAATTA	NA	False	NA	20	True	AATAAA	-21	NA	110358263	110447682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_110358374_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
m54284U_201203_174622/330564/ccs	chr7	+	4152	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	259	junction_5	48.7637603245243	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTCCATTTGGTC	NA	False	NA	21	True	AATAAA	-22	NA	127187938	127202766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199799_127201638
m54284U_201203_174622/33097516/ccs	chr15	-	2735	8	NNC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	-7493	-262	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_7	242.987863978464	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCATTCCTGCAT	7649	False	NA	-2	True	AATAAA	-19	NA	88592560	88571498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88592298
m54284U_201203_174622/33097962/ccs	chr4	+	180	1	Intergenic	novelGene_2314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	141855444	141855624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141855400_141855600
m54284U_201203_174622/33161590/ccs	chr16	-	4252	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_4	33.0351973361527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	False	NA	1	True	AATAAA	-28	NA	10994206	10954455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963105_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
m54284U_201203_174622/33163229/ccs	chrX	-	3928	13	NIC	ENSMUSG00000031392.19	novel	3825	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	272	junction_10	42.1586784264719	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCTTTTAATTTT	NA	False	NA	-4	True	NA	NA	NA	73067437	73057523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066559_73066671_73066804_73066971_73067140_73067215
m54284U_201203_174622/33163732/ccs	chr1	-	184	1	Intergenic	novelGene_264	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGACTGCCAGTGTGTT	NA	False	NA	NA	False	NA	NA	NA	105548823	105548639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_105548600_105548800
m54284U_201203_174622/33163993/ccs	chr19	-	3903	17	NIC	ENSMUSG00000024969.16	novel	4488	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_3	61.0913442620966	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3860	False	NA	-1	True	AATAAA	-20	NA	7319225	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
m54284U_201203_174622/33226981/ccs	chr13	-	1887	16	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	328	junction_3	2258.6895512418	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5157	False	NA	-5	True	AATAAA	-14	NA	58549924	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540231_58541009_58541180_58541505_58541574_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
m54284U_201203_174622/33227032/ccs	chr1	-	4513	16	NNC	ENSMUSG00000026663.7	novel	7246	16	NA	NA	0	-2730	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	17.5630926155453	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGCTCAGTGGTTAA	NA	False	NA	NA	False	AATAAA	-11	NA	170695340	170534972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_170537657_170574674_170574760_170614914_170615027_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
m54284U_201203_174622/33227317/ccs	chr11	-	3907	10	NIC	ENSMUSG00000020868.16	novel	3442	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	112	junction_6	13.3499895963339	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAATGTCCTTGTTTGCT	2307	False	NA	-6	True	AATATA	-16	NA	94568239	94554676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_94555736_94557023_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
m54284U_201203_174622/33293656/ccs	chr5	-	4317	33	NIC	ENSMUSG00000060261.17	novel	4381	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_25	96.4752184420305	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATTCTTTTCCTGCT	621	False	NA	-6	True	AATAAA	-28	NA	134343614	134266690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
m54284U_201203_174622/33295094/ccs	chr2	+	3173	14	NIC	ENSMUSG00000026814.17	novel	3422	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	154	junction_1	26.5080092842337	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGCCCCTCTGGGTTGT	582	False	NA	25	True	AATAAA	-13	NA	32536633	32572130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32569155_32570292_32570348_32571207_32571310_32571448
m54284U_201203_174622/33295104/ccs	chr5	+	5296	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.7436537036046	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1443	False	NA	16	True	AATACA	-15	NA	34527276	34643800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_34527772_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
m54284U_201203_174622/33425997/ccs	chr2	-	1910	1	Genic_Genomic	ENSMUSG00000027239.15	novel	NA	NA	NA	NA	-15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGCCCCTTCCCAGTT	NA	False	NA	NA	False	AATAAA	-42	NA	91762059	91760149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_91760100_91762100
m54284U_201203_174622/3342732/ccs	chr4	+	3186	15	NNC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_14	96.089244232343	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGGTTTGTGTAT	NA	False	NA	4	True	NA	NA	NA	119090111	119106172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105092
m54284U_201203_174622/3343257/ccs	chr15	-	3481	9	NIC	ENSMUSG00000022992.18	novel	3596	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	91	junction_6	351.279247003008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGACGGAATCATGTT	NA	False	NA	NA	False	NA	NA	NA	98432145	98415538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429600_98429780_98431398_98431658_98431782
m54284U_201203_174622/3344518/ccs	chrX	+	3916	24	NNC	ENSMUSG00000041718.17	novel	4191	27	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_14	246.7729951861	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118949	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/33620529/ccs	chr13	-	983	9	NIC	ENSMUSG00000021376.12	novel	2708	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	30.2438010177292	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTAGCCATGGTTTC	NA	False	NA	-2	True	ATTAAA	-17	NA	47196620	47178654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196602
m54284U_201203_174622/33622731/ccs	chr14	-	2704	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	102.855729242771	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACATTCTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	47655664	47625244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47625577_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
m54284U_201203_174622/33687449/ccs	chr19	-	2606	10	NIC	ENSMUSG00000024766.16	novel	2839	11	NA	NA	93	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	21.3148067702788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTTCTGTTTCTTAAA	NA	False	NA	-4	True	NA	NA	NA	33567615	33532562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_33533880_33534506_33534579_33535664_33535737_33536911_33537056_33557864_33557975_33559452_33559652_33560446_33560565_33562269_33562376_33565600_33565744_33567290
m54284U_201203_174622/33818047/ccs	chr3	-	3034	16	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	intron_retention	FALSE	canonical	1	178	junction_5	103.251279249541	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662195	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658943_95660318_95660443_95661630_95661828_95662069
m54284U_201203_174622/33884656/ccs	chr17	-	4328	11	NIC	ENSMUSG00000048905.6	novel	4597	12	NA	NA	-4008	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	3.26955654485436	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAACCGGATCTTTTCA	NA	False	NA	-4	True	AATAAA	-15	NA	29128682	29115365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_29117898_29118456_29118721_29120104_29120170_29120923_29121050_29121746_29121997_29122220_29122283_29123489_29123625_29124228_29124470_29124613_29124730_29127241_29127362_29128265
m54284U_201203_174622/34013373/ccs	chr17	-	4490	12	NIC	ENSMUSG00000024045.7	novel	4071	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	426	junction_6	73.0315226856535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540119	32522647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
m54284U_201203_174622/34014432/ccs	chr3	+	4818	4	NIC	ENSMUSG00000027806.10	novel	4659	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	51.1881062574327	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGCTCTATATGTGTT	NA	False	NA	18	True	ATTAAA	-18	NA	58322140	58369141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_58325035_58344737_58344897_58366751_58366804_58367428
m54284U_201203_174622/34015104/ccs	chr2	+	3704	23	NIC	ENSMUSG00000026812.17	novel	7702	23	NA	NA	0	-1367	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	10.8204734012935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTTCATTTGCGTC	3465	False	NA	NA	False	NA	NA	NA	28531261	28577193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568963_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
m54284U_201203_174622/34015875/ccs	chr1	-	5911	25	NNC	ENSMUSG00000026383.15	novel	6442	25	NA	NA	0	-528	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	19.1973938480085	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGCTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	119576666	119473294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_119476926_119477616_119477745_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
m54284U_201203_174622/3409263/ccs	chr11	+	3542	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_25	206.266817496174	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745885_115745932_115746017_115746080_115746294
m54284U_201203_174622/3410534/ccs	chrX	+	3991	27	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	1658	0	at_least_one_novel_splicesite	FALSE	canonical	2	69	junction_1	255.804300661045	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143102676	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143102703_143102998_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/34146652/ccs	chr13	-	1579	10	NIC	ENSMUSG00000021417.16	novel	1746	10	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_9	52.8942574306115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTAAGAATTCATGTTGG	NA	False	NA	NA	False	AATAAA	-17	NA	35178106	35161730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177812
m54284U_201203_174622/34211587/ccs	chr2	+	7968	33	NIC	ENSMUSG00000038241.17	novel	7919	34	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_1	22.1895245555194	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTGGCTGCTGTCTCTG	NA	False	NA	12	True	AATAAA	-19	NA	155798491	155840820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
m54284U_201203_174622/34212354/ccs	chr6	+	3178	11	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	54.9912720347511	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTGAGCTACTGTGTA	NA	False	NA	8	True	AATAAA	-19	NA	124985995	125014833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
m54284U_201203_174622/34275820/ccs	chr7	+	3684	11	NIC	ENSMUSG00000030811.15	novel	3641	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.2511653931107	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	544	False	NA	15	True	TATAAA	-19	NA	127344957	127368655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127345040_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
m54284U_201203_174622/34537755/ccs	chr11	+	4866	19	NIC	ENSMUSG00000020412.17	novel	2650	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	62.2245039264186	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGAGTCTCCTGTGTGT	NA	False	NA	14	True	AATAAA	-23	NA	4587746	4635699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_4587823_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
m54284U_201203_174622/34603199/ccs	chr5	+	6132	5	NNC	ENSMUSG00000029249.16	novel	6924	4	NA	NA	-245	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	395.109478499314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	4156	False	NA	14	True	AATAAA	-14	NA	77413797	77434279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549_77430864_77431900
m54284U_201203_174622/34603267/ccs	chr16	+	5393	32	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	236	junction_1	373.786157543695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494509_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/34605356/ccs	chr11	+	4265	21	NNC	ENSMUSG00000020536.13	novel	4268	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_6	61.9123574094865	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGCACACATGTGGACA	NA	False	NA	39	True	AATAAA	-24	NA	60590670	60605012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597266_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
m54284U_201203_174622/34605489/ccs	chr1	+	2622	4	NIC	ENSMUSG00000043015.16	novel	3247	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	18.263503375737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGCTCCGAGTCAGTG	NA	False	NA	9	True	ATTAAA	-20	NA	52669895	52691078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_52670011_52676523_52676640_52687908_52688086_52688864
m54284U_201203_174622/34605507/ccs	chr10	-	2373	14	NIC	ENSMUSG00000020076.8	novel	2535	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_6	72.4032102331865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTAAGAGTTTTCT	8106	False	NA	-11	True	ATTAAA	-28	NA	62486997	62451793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
m54284U_201203_174622/34669723/ccs	chr4	-	2663	1	Antisense	novelGene_ENSMUSG00000028601.19_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACCAAAACAA	2972	False	NA	NA	False	NA	NA	NA	108029111	108026448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_108026400_108029100
m54284U_201203_174622/34671453/ccs	chr9	+	2788	14	NNC	ENSMUSG00000032097.11	novel	6065	14	NA	NA	0	-3220	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	7.66070431047592	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATATATTATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	44516188	44548808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44516225_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
m54284U_201203_174622/34734507/ccs	chr5	-	1369	7	NIC	ENSMUSG00000000568.16	novel	1117	8	NA	NA	0	239	intron_retention	FALSE	canonical	3	147	junction_1	1721.96764068189	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTGCCTTCACTTATT	NA	False	NA	-7	True	AATAAA	-12	NA	100126797	100109902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100110064_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
m54284U_201203_174622/34735310/ccs	chr4	+	5046	20	NIC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_3	146.707861670397	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/3474422/ccs	chr3	+	2627	6	NIC	ENSMUSG00000068744.13	novel	1686	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	155	junction_1	129.069903540678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	7032	False	NA	16	True	AATAAA	-24	NA	108291154	108295495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108291212_108291551_108291748_108292285_108293724_108293815_108294053_108294593_108294712_108294914
m54284U_201203_174622/3475585/ccs	chr11	+	3600	6	NIC	ENSMUSG00000018377.11	novel	4583	6	NA	NA	0	-1001	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	44.5268458348444	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTAGCTATGACTTTGTT	NA	False	NA	13	True	AATAAA	-18	NA	87959104	87974554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87959260_87963882_87964578_87965487_87965552_87966998_87967201_87969228_87969382_87972223
m54284U_201203_174622/3475868/ccs	chr16	+	3162	17	NIC	ENSMUSG00000022517.18	novel	3138	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	141.440579396438	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGTGTGCCTTTGTTC	2927	False	NA	14	True	AATAAA	-15	NA	4704115	4756160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_4704338_4725228_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
m54284U_201203_174622/3476016/ccs	chr1	+	168	1	Intergenic	novelGene_263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	105435602	105435770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_105435600_105435800
m54284U_201203_174622/34800836/ccs	chr8	-	1964	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	58	-359	intron_retention	FALSE	canonical	3	23	junction_3	123.22427610752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTGTGAAATTATGGAG	4583	False	NA	-9	True	AATAAA	-17	NA	14024974	14002488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14024944
m54284U_201203_174622/34931121/ccs	chr5	+	3796	21	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	224	junction_6	249.524768309681	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224585_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/34932865/ccs	chrX	-	1614	10	NNC	ENSMUSG00000058147.2	novel	1584	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_5	600.2778986066	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTTGGCATGAGTCAT	NA	False	NA	-8	True	AATAAA	-16	NA	72308996	72298145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_72299035_72299128_72299225_72301241_72301341_72302698_72302799_72303202_72303233_72303613_72303732_72305110_72305146_72306028_72306099_72306921_72307059_72308956
m54284U_201203_174622/34997443/ccs	chr5	+	3128	16	NIC	ENSMUSG00000023353.15	novel	3207	18	NA	NA	-230	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_11	24.1655402036316	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24656944	24707045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
m54284U_201203_174622/34997831/ccs	chr18	-	3523	5	NIC	ENSMUSG00000024570.8	novel	1377	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	264	junction_2	22.6867251933813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTGTGTATACGCAC	NA	False	NA	-3	True	AATAAA	-20	NA	80243873	80235479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_80236098_80236446_80236515_80238233_80240578_80240878_80241099_80243600
m54284U_201203_174622/35063749/ccs	chr17	+	4382	9	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	262	junction_7	124.788759008975	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1236	False	NA	12	True	AATAAA	-20	NA	24888720	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24888948_24895527_24895641_24896029_24896596_24896808_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
m54284U_201203_174622/35064434/ccs	chr1	-	4736	18	NIC	ENSMUSG00000026274.12	novel	5779	18	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_17	48.1779429495616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAAGGAGTGTTTAAGT	NA	False	NA	-9	True	ATTAAA	-27	NA	93271268	93237559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_93237972_93238489_93238637_93240517_93240652_93242002_93242203_93244506_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249945_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331_93263568_93265066_93265303_93270987
m54284U_201203_174622/35064670/ccs	chr9	+	2890	6	NIC	ENSMUSG00000032540.17	novel	3157	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	35.2363448728724	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGGTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-17	NA	122180853	122210589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_122180905_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
m54284U_201203_174622/35193108/ccs	chr5	-	2674	20	NIC	ENSMUSG00000041890.18	novel	5032	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	61.2872533551857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAACATTTTCTTAAGA	NA	False	NA	NA	False	NA	NA	NA	114911556	114867930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881836_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
m54284U_201203_174622/35193701/ccs	chr8	+	4366	35	NIC	ENSMUSG00000004565.16	novel	4263	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	71.2493610728349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3565636	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_3565691_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
m54284U_201203_174622/35194765/ccs	chr10	-	3401	10	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	118.633682473756	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047454	127032935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_127035014_127035117_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
m54284U_201203_174622/35261102/ccs	chr19	-	5593	26	NIC	ENSMUSG00000036098.16	novel	5674	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_20	4.51911495759955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCTCTGACATCTTCT	7142	False	NA	0	True	NA	NA	NA	10218112	10185635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192467_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10217922
m54284U_201203_174622/3541367/ccs	chr9	+	4005	9	NNC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_8	68.308011060197	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556595_19557997
m54284U_201203_174622/3541782/ccs	chr5	+	523	1	FSM	ENSMUSG00000058905.6	ENSMUST00000145209.2	414	1	0	-109	0	109	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCCAGCAGGCAGGAAT	NA	False	NA	NA	False	NA	NA	NA	133503961	133504484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_133504000_133504500
m54284U_201203_174622/35456357/ccs	chr12	+	2501	12	NIC	ENSMUSG00000033373.17	novel	430	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	92.2903252363508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGTCTTTTTTTTTTC	4	True	NA	14	True	AATAAA	-15	NA	76887068	76968186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_76887195_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
m54284U_201203_174622/35456813/ccs	chr9	+	3290	11	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	234.862853597584	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1163	False	NA	64	True	NA	NA	NA	108394301	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108394452_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201203_174622/35457254/ccs	chr15	+	9474	30	NIC	ENSMUSG00000055024.13	novel	9566	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	19.689141849701	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTCACTTCTTTGG	2863	False	NA	22	True	AATAAA	-22	NA	81469551	81536278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81504200_81504319_81505262_81505438_81507648_81507727_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
m54284U_201203_174622/35586663/ccs	chr8	+	5130	19	NIC	ENSMUSG00000004568.14	novel	5271	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_12	66.294353892505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGCTGAAACAGACCT	NA	False	NA	24	True	AATAAA	-14	NA	3443037	3506601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
m54284U_201203_174622/35652706/ccs	chr4	-	2527	13	NIC	ENSMUSG00000028577.14	novel	2784	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_12	198.520499921013	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGAGGTTTTCCTGTG	NA	False	NA	-12	True	AATAAA	-15	NA	94491418	94457403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94491113
m54284U_201203_174622/35653074/ccs	chr17	-	3245	22	NIC	ENSMUSG00000038762.16	novel	3161	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	801	junction_12	69.407338839688	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTGCCTGTGGGGTGCT	NA	False	NA	-12	True	AATAAA	-18	NA	36280653	36267710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
m54284U_201203_174622/35717265/ccs	chr10	+	4163	18	NNC	ENSMUSG00000020070.19	novel	4130	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_12	17.5952179725552	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAAGAAATTAACACTT	NA	False	NA	NA	False	AATAAA	-21	NA	62816030	62849734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840392_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
m54284U_201203_174622/35717393/ccs	chr11	-	3818	18	NIC	ENSMUSG00000002814.16	novel	3741	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	121	junction_8	19.1988321444129	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGGTGGCATTCAGT	NA	False	NA	0	True	AATAAA	-15	NA	60668113	60630884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
m54284U_201203_174622/35782883/ccs	chr14	-	4138	16	NIC	ENSMUSG00000021929.10	novel	4069	17	NA	NA	-201	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	159.771865135539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTGAAAGACTTATT	6345	False	NA	-12	True	AATAAA	-22	NA	61677524	61602659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
m54284U_201203_174622/35915426/ccs	chr19	+	5214	2	Intergenic	novelGene_9181	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3428	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCGAGTAGCTGAGTAAAG	1181	False	NA	NA	False	NA	NA	NA	22699839	22705267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_22700550_22700763
m54284U_201203_174622/35916314/ccs	chr16	+	1658	13	NIC	ENSMUSG00000022837.15	novel	2257	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_12	42.1751473685102	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAGTCTGAAAGCATG	NA	False	NA	15	True	NA	NA	NA	36648768	36679934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36679723
m54284U_201203_174622/35982026/ccs	chr12	+	2315	10	NIC	ENSMUSG00000021178.10	novel	1591	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1446	junction_1	308.913548176369	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGTTCATTTT	3973	False	NA	12	True	NA	NA	NA	100076412	100089664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100086398_100087251_100087407_100089316
m54284U_201203_174622/35982175/ccs	chr11	+	4333	25	NIC	ENSMUSG00000017119.21	novel	4654	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_20	55.70358057512	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCTGTTTATTGTTTAA	987	False	NA	21	True	AATAAA	-24	NA	101443692	101472777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_101443782_101444813_101444925_101446635_101446702_101447000_101447118_101450344_101450408_101451258_101451278_101453122_101453146_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101463928_101464004_101465824_101465942_101466049_101466243_101467128_101467236_101468019_101468078_101468757_101468864_101471410
m54284U_201203_174622/36047609/ccs	chr17	-	2229	13	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1063	junction_5	409.470050458177	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906498	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
m54284U_201203_174622/3605241/ccs	chr19	+	2414	10	NNC	ENSMUSG00000025227.15	novel	2278	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	82.6896622735489	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTGGGTCTGTGCCG	4253	False	NA	13	True	AGTAAA	-13	NA	46345373	46363691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46345424_46350784_46350976_46354749_46354993_46355648_46355732_46356147_46356601_46356704_46356829_46357675_46357773_46360374_46360547_46360620_46360815_46362884
m54284U_201203_174622/3605455/ccs	chr16	-	163	1	Intergenic	novelGene_8176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGTATAATGAAG	NA	False	NA	NA	False	NA	NA	NA	29563331	29563168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_29563200_29563300
m54284U_201203_174622/36111472/ccs	chr9	+	2379	12	NIC	ENSMUSG00000032294.18	novel	2432	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_2	6691.00290201034	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTTTGTTTTGTTTT	1872	False	NA	20	True	AATAAA	-20	NA	59563858	59586658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59563933_59566281_59566437_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
m54284U_201203_174622/36175974/ccs	chr11	+	153	1	Intergenic	novelGene_6215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATAAAAGAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	94497817	94497970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94497800_94498000
m54284U_201203_174622/36177195/ccs	chr5	-	5289	30	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	1370	combination_of_known_splicesites	FALSE	canonical	3	14	junction_28	102.010514484529	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563673	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124552461_124552591_124563509
m54284U_201203_174622/36177804/ccs	chr11	-	6078	1	Intergenic	novelGene_6176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAAAATTTGATAAAGCT	NA	False	NA	NA	False	NA	NA	NA	87372209	87366131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87366100_87372200
m54284U_201203_174622/36242511/ccs	chr10	+	2503	5	NIC	ENSMUSG00000001436.16	novel	2347	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	44.4606567652796	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGTTGTGAGACAC	NA	False	NA	16	True	ATTAAA	-18	NA	76869101	76886265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_76869182_76874183_76874414_76877649_76878809_76880594_76880737_76885373
m54284U_201203_174622/36242802/ccs	chr8	-	3809	3	NNC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	8.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCGTTGGGAACCTT	NA	False	NA	-5	True	AATAAA	-14	NA	112603382	112589669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_112593129_112596288_112596391_112603134
m54284U_201203_174622/36243117/ccs	chr1	-	3493	20	Fusion	ENSMUSG00000009905.6_ENSMUSG00000009907.18	novel	4633	11	NA	NA	0	-3441	multi-exon	TRUE	canonical	1	1	junction_9	185.485303417639	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTTCTTACTCTCAGAG	85	False	NA	NA	False	AATAAA	-14	NA	106724397	106651629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106700131_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
m54284U_201203_174622/36308895/ccs	chr13	-	1884	1	NIC	ENSMUSG00000021302.11	novel	4244	4	NA	NA	0	-2426	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAACCAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14237994	14236110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_14236100_14238000
m54284U_201203_174622/36373725/ccs	chr2	+	253	1	Intergenic	novelGene_1002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACTTATAATTATAATAAC	NA	False	NA	NA	False	NA	NA	NA	119111554	119111807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119111600_119111800
m54284U_201203_174622/36375365/ccs	chr17	+	1198	7	NNC	ENSMUSG00000007039.13	novel	382	2	NA	NA	-240	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	166.174021903412	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTGACTGGTTTCTCG	NA	False	NA	17	True	AATAAA	-23	NA	35278551	35281071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35278642_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
m54284U_201203_174622/36438542/ccs	chr10	+	2833	14	NNC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	27.2915445214606	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	24	True	AATAAA	-17	NA	23672883	23703866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_23673082_23674643_23674784_23679659_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
m54284U_201203_174622/36438904/ccs	chr1	-	2635	14	NIC	ENSMUSG00000038733.15	novel	751	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	34.0406996222056	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTACAGATTGTTTTG	NA	False	NA	NA	False	AGTAAA	-21	NA	181039543	181007971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_181008214_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036615_181036673_181036777_181036878_181038640
m54284U_201203_174622/36503857/ccs	chr14	-	3460	11	NNC	ENSMUSG00000022052.10	novel	4010	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_8	320.226482352725	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTTGAATTTGTATTTA	NA	False	NA	-8	True	AATAAA	-21	NA	67309893	67252122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67275386_67275458_67276323_67276419_67307683_67307759_67309538
m54284U_201203_174622/36504997/ccs	chr6	-	1674	5	NIC	ENSMUSG00000032641.19	novel	1610	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	26.7348087705897	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATTGATTTACTTAG	NA	False	NA	-18	True	ATTAAA	-17	NA	134874888	134846119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_134847446_134863853_134863900_134864592_134864749_134874124_134874177_134874794
m54284U_201203_174622/36505814/ccs	chr1	+	2893	16	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	138.419876543155	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175734171_175734227_175735995
m54284U_201203_174622/36506040/ccs	chr4	+	3278	25	NIC	ENSMUSG00000041351.17	novel	1216	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	42.7395008224892	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGTTAAGAACAGCTT	3337	False	NA	11	True	AATAAA	-21	NA	137392036	137457172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137392156_137410771_137410808_137431384_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455675_137455838_137455880_137456185
m54284U_201203_174622/36571053/ccs	chr7	-	172	1	Intergenic	novelGene_3910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9419	False	NA	NA	False	NA	NA	NA	79781361	79781189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79781200_79781400
m54284U_201203_174622/36571419/ccs	chr9	+	2759	14	NIC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_8	113.611608707632	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201203_174622/36571634/ccs	chr18	+	5684	38	NNC	ENSMUSG00000024421.17	novel	10548	75	NA	NA	-1361	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	19.91739698612	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGATGTTTTATAAGCAA	NA	False	NA	NA	False	AATAAA	-19	NA	12635894	12716070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_12636222_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
m54284U_201203_174622/36700333/ccs	chr4	+	4806	18	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	0	intron_retention	TRUE	canonical	3	22	junction_8	40.9189425766563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048589	155065395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155057637_155057659_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
m54284U_201203_174622/36701179/ccs	chr4	+	2847	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_1	48.8618908250592	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
m54284U_201203_174622/36702722/ccs	chr3	+	4692	24	Fusion	ENSMUSG00000015522.19_ENSMUSG00000097532.3	novel	2825	18	NA	NA	-344	0	multi-exon	TRUE	canonical	0	0	junction_13	94.5688055291281	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95334637	95404551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr3_+_95334711_95335864_95336134_95337597_95337750_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
m54284U_201203_174622/3671607/ccs	chr12	+	6635	29	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	0	-199	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	53.2768089073186	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116369021	116427152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_116369112_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
m54284U_201203_174622/36833461/ccs	chr8	+	2806	13	NNC	ENSMUSG00000038497.8	novel	4335	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_7	12.8344155387856	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTAGTTTTAATTTGA	NA	False	NA	5	True	AATAAA	-17	NA	13338208	13371396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
m54284U_201203_174622/36899280/ccs	chr17	-	2143	2	Antisense	novelGene_ENSMUSG00000099237.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCATCCCTGCAGAAAG	7516	False	NA	NA	False	NA	NA	NA	27548992	27543023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_27544999_27548824
m54284U_201203_174622/36962531/ccs	chr2	+	5301	19	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	371	junction_1	66.7609749612584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398175	144432669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
m54284U_201203_174622/36964389/ccs	chr2	-	1821	14	NIC	ENSMUSG00000026970.17	novel	1806	15	NA	NA	0	63	combination_of_known_junctions	FALSE	canonical	3	198	junction_5	40.1883141188577	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAGAAAACTTCAAT	NA	False	NA	NA	False	NA	NA	NA	60711814	60583002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
m54284U_201203_174622/37028136/ccs	chr6	+	182	1	Intergenic	novelGene_3439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTCTTGCATCTGCTTC	NA	False	NA	NA	False	NA	NA	NA	117854767	117854949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_117854800_117854900
m54284U_201203_174622/37028158/ccs	chr18	+	4318	13	NNC	ENSMUSG00000073563.4	novel	4249	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_10	70.1610745990174	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATAAAGGTAGTTT	NA	False	NA	NA	False	TTTAAA	-28	NA	53995193	54088620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
m54284U_201203_174622/37028929/ccs	chr16	+	197	1	Intergenic	novelGene_8166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCCTTGGCCATAGT	NA	False	NA	NA	False	NA	NA	NA	23093966	23094163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_23094000_23094200
m54284U_201203_174622/37029688/ccs	chr9	+	5896	4	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_1	87.9406365428154	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	395	False	NA	NA	False	TTTAAA	-7	NA	37400614	37435446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_37401130_37424909_37428769_37430022_37430084_37433985
m54284U_201203_174622/37094074/ccs	chr11	+	1907	13	NIC	ENSMUSG00000025156.18	novel	1827	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	682	junction_1	159.983050317491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGGCTCCTTTCCTTTC	1424	False	NA	2	True	ATTAAA	-19	NA	120675130	120679928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679423_120679495
m54284U_201203_174622/37094500/ccs	chr9	-	6628	10	NIC	ENSMUSG00000063108.16	novel	11276	10	NA	NA	0	2065	combination_of_known_junctions	FALSE	canonical	3	10	junction_9	19.3964487013015	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371285	20344260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371201
m54284U_201203_174622/37094997/ccs	chr13	+	4582	13	NNC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	73.1510518645418	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCAGTCTTCTCTGTGT	8653	False	NA	14	True	AATAAA	-20	NA	97208086	97266023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_97208220_97228325_97228461_97230098_97230199_97230569_97230656_97234047_97234220_97243490_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
m54284U_201203_174622/37226431/ccs	chr8	+	2133	6	NIC	ENSMUSG00000031562.17	novel	2096	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	132.43775896624	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGTGTTTGCTTTTATATT	NA	False	NA	10	True	ATTAAA	-16	NA	48563223	48594700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_48563552_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
m54284U_201203_174622/37226615/ccs	chr1	+	1525	6	NIC	ENSMUSG00000003135.16	novel	3162	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	64	junction_1	290.336769975833	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTTTCCCATGGATGAA	NA	False	NA	27	True	AGTAAA	-15	NA	39574882	39584482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_39575419_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
m54284U_201203_174622/3735600/ccs	chr17	+	3057	5	NNC	ENSMUSG00000117055.3	novel	1733	2	NA	NA	-13392	1032	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3.26917420765551	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCATCAGTTTTTAGTG	NA	False	NA	5	True	NA	NA	NA	22893308	22910473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_22893506_22905293_22905368_22906456_22906513_22906703_22906831_22907870
m54284U_201203_174622/37356915/ccs	chr18	-	1247	7	NNC	ENSMUSG00000036223.17	novel	2630	7	NA	NA	0	-298	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	167.606433846278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTTCAAAACGTAC	6765	False	NA	-19	True	AGTAAA	-16	NA	74340850	74329847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335918_74337334_74337460_74339859_74339956_74340664
m54284U_201203_174622/37357668/ccs	chr7	+	5331	19	NIC	ENSMUSG00000055629.6	novel	3556	20	NA	NA	-126	0	intron_retention	FALSE	canonical	3	174	junction_7	16.4414411671946	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTTCTGTGAGTGTTC	NA	False	NA	24	True	AATGAA	-25	NA	140640890	140652313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_140641338_140643749_140643854_140644190_140644287_140644372_140644469_140644553_140644645_140644719_140644821_140644966_140645035_140645239_140645319_140646844_140646912_140647022_140647158_140647239_140647350_140647432_140647534_140647612_140647714_140647785_140650608_140650700_140650855_140650954_140651028_140651120_140651275_140651549_140651677_140651908
m54284U_201203_174622/3736315/ccs	chr9	-	2828	6	NNC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	1780.14781408736	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_110770848_110771396_110771507_110771597_110771713_110772219_110772322_110773258_110773312_110774891
m54284U_201203_174622/3736417/ccs	chr5	-	3350	18	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_17	324.805078624621	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559841	149540309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559623
m54284U_201203_174622/3737720/ccs	chr4	+	1629	11	NIC	ENSMUSG00000029064.16	novel	3143	12	NA	NA	0	160	combination_of_known_junctions	FALSE	canonical	3	731	junction_10	1033.79389145032	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAACCCTGAGTGTGATTG	NA	False	NA	5	True	AATAAA	-15	NA	155575826	155642270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
m54284U_201203_174622/37423120/ccs	chr14	+	3609	21	NNC	ENSMUSG00000021893.15	novel	4613	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	55.8950802844043	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGTTTAATGTCCAGAA	NA	False	NA	17	True	AATAAA	-22	NA	31058631	31093943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_31058941_31061995_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
m54284U_201203_174622/37423341/ccs	chr2	+	2761	20	NIC	ENSMUSG00000027429.17	novel	2779	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_1	64.9806278398403	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGATTTTGTCTCATTTT	NA	False	NA	NA	False	AATAAA	-37	NA	144398175	144432669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_144398245_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
m54284U_201203_174622/37423894/ccs	chr16	-	198	1	Intergenic	novelGene_8103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATTGGTGAGAAA	7343	False	NA	NA	False	NA	NA	NA	17274171	17273973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_17274000_17274200
m54284U_201203_174622/37487504/ccs	chr12	-	2371	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	45.4883535799955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCTGTGTGTTTATGTGT	NA	False	NA	-3	True	NA	NA	NA	112964052	112923704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929639_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951536_112951713_112956683_112956765_112963792
m54284U_201203_174622/37489289/ccs	chr7	-	1318	9	NNC	ENSMUSG00000030697.8	novel	1359	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	861.65901028191	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGGTTCTGTCAGGTT	5070	False	NA	NA	False	AATAAA	-13	NA	126391668	126385039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126385464_126385543_126385734_126386391_126386480_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
m54284U_201203_174622/37552167/ccs	chr4	+	5780	7	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	85	junction_1	44.8293058909757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8258	False	NA	22	True	NA	NA	NA	156194441	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
m54284U_201203_174622/37553479/ccs	chr2	+	8583	36	NNC	ENSMUSG00000036202.17	novel	2789	14	NA	NA	-1314	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_16	149.172832236809	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51961529	52012395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51961660_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006679_52006758_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201203_174622/37553581/ccs	chr6	-	4066	8	NIC	ENSMUSG00000030322.13	novel	3614	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	62	junction_7	15.9770243200181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTTTGGCATTGTGTT	7881	False	NA	NA	False	AATAAA	-21	NA	115830332	115817657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115829645
m54284U_201203_174622/37750557/ccs	chr1	-	666	1	NIC	ENSMUSG00000073538.11	novel	766	4	NA	NA	0	-7321	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAATAAATGA	NA	False	NA	NA	False	NA	NA	NA	153289979	153289313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_153289300_153290000
m54284U_201203_174622/37816111/ccs	chr11	+	177	1	Intergenic	novelGene_6437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	113662798	113662975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_113662800_113663000
m54284U_201203_174622/37948010/ccs	chr8	+	4564	32	NIC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	24.5815764788433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567619	86787270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_86567687_86569649_86569742_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
m54284U_201203_174622/38010956/ccs	chr12	+	4435	22	NNC	ENSMUSG00000021111.16	novel	3022	23	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_1	448.787623565712	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750962	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_105751174_105765981_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
m54284U_201203_174622/38076870/ccs	chr2	-	2995	9	NNC	ENSMUSG00000026878.18	novel	3081	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	450.926667402805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTGCATTATTTTTGA	9690	False	NA	NA	False	AATAAA	-26	NA	35090994	35070216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_35072460_35072528_35072581_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
m54284U_201203_174622/38076968/ccs	chr9	+	5184	28	NNC	ENSMUSG00000032555.11	novel	5224	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_16	115.358806863575	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATTGATTTGTTCATTT	953	False	NA	14	True	AATAAA	-19	NA	103182413	103227627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211294_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
m54284U_201203_174622/38142162/ccs	chr13	-	2139	16	NNC	ENSMUSG00000042167.7	novel	3081	15	NA	NA	0	214	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_12	150.937868011974	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTGAAAATGTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	93328893	93283911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93313602_93313771_93320586_93320825_93322315_93322406_93322810_93322985_93328601
m54284U_201203_174622/38142281/ccs	chr11	-	1613	6	NIC	ENSMUSG00000044328.14	novel	1463	7	NA	NA	52	0	intron_retention	FALSE	canonical	3	152	junction_1	15.3179633110933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTTGGGAGATTGTCTCT	NA	False	NA	1	True	ATTAAA	-21	NA	77404144	77398924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403792_77403985
m54284U_201203_174622/38142370/ccs	chr5	+	4787	18	NIC	ENSMUSG00000002748.8	novel	6492	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_6	80.8633346624634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACAGCTTTGATGTTTCC	NA	False	NA	41	True	AATAAA	-44	NA	135216117	135274983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
m54284U_201203_174622/38208455/ccs	chr19	-	1059	8	NNC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_6	317.627107772364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	False	NA	-33	True	TATAAA	-22	NA	41921737	41912004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921448_41921604_41921690
m54284U_201203_174622/38208496/ccs	chr14	+	2091	8	NIC	ENSMUSG00000041765.7	novel	2139	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	124.704057836208	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	8886	False	NA	16	True	AATAAA	-16	NA	122116031	122258446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122231636_122231883_122246202_122246326_122257361
m54284U_201203_174622/38210005/ccs	chr8	-	1834	10	NNC	ENSMUSG00000031578.6	novel	1902	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	244.810634804904	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGTCTTGAGAATTCTG	NA	False	NA	-2	True	TATAAA	-20	NA	31658791	31649490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656156_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
m54284U_201203_174622/38210142/ccs	chr12	-	4334	7	NNC	ENSMUSG00000084883.3	novel	1302	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	31.7122478967775	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCGAGTGTGTAGTGCT	NA	False	NA	-7	True	AATAAA	-19	NA	108241684	108169860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177879_108183045_108183085_108187967_108188042_108240596
m54284U_201203_174622/38537106/ccs	chr13	-	3842	8	ISM	ENSMUSG00000021614.17	ENSMUST00000109546.9	12427	15	53228	0	-10373	0	3prime_fragment	FALSE	canonical	3	44	junction_4	6.41108733494768	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGACTTGTCTGTTTA	NA	False	NA	-1	True	AAGAAA	-23	NA	89837400	89803430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403
m54284U_201203_174622/38600954/ccs	chr4	+	2822	9	NIC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_3	167.217625790465	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600927	131629017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
m54284U_201203_174622/38601651/ccs	chr5	-	4687	18	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	0	-109	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	51.0853143531539	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGTGTGTGTTTTTTT	NA	False	NA	-11	True	AATAAA	-13	NA	21087122	20963769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
m54284U_201203_174622/38667490/ccs	chr6	-	2097	17	NIC	ENSMUSG00000030061.17	novel	2257	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_14	172.721947342398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGTATATCAAT	NA	False	NA	-7	True	AATAAA	-24	NA	97182529	97160967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97180434_97180556_97182266_97182309_97182493
m54284U_201203_174622/38669030/ccs	chr15	-	2156	4	ISM	ENSMUSG00000041852.16	ENSMUST00000048966.7	7417	5	59962	0	47639	0	3prime_fragment	FALSE	canonical	3	113	junction_3	13.9522996909709	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACTCTTAAGTGAATGT	NA	False	NA	-5	True	AATAAA	-28	NA	82736373	82692636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713
m54284U_201203_174622/38733496/ccs	chr8	-	184	1	Intergenic	novelGene_4561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATCCCACCAGTGGGAGC	NA	False	NA	NA	False	NA	NA	NA	122383213	122383029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_122383000_122383200
m54284U_201203_174622/38798873/ccs	chr9	-	3876	1	Intergenic	novelGene_4799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCGTCTGTTCGTGAT	NA	False	NA	NA	False	NA	NA	NA	57388336	57384460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_57384500_57388300
m54284U_201203_174622/38799751/ccs	chr2	+	292	1	Intergenic	novelGene_637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCAAACTAAAAAGCACC	2111	False	NA	NA	False	NA	NA	NA	25257786	25258078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_25257800_25258100
m54284U_201203_174622/38799848/ccs	chr11	-	3488	7	NNC	ENSMUSG00000049680.18	novel	5089	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	14.7271480229163	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGAGTTGAATGTATAC	8847	False	NA	-6	True	NA	NA	NA	5691150	5664986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_5665621_5665651_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
m54284U_201203_174622/38799945/ccs	chr1	-	8266	46	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	0	intron_retention	FALSE	canonical	3	235	junction_7	446.060812994023	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692359	71624681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
m54284U_201203_174622/38862861/ccs	chr10	+	5212	6	NIC	ENSMUSG00000019817.19	novel	5260	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_3	45.5455815639673	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_12966765_12981598_12981638_12988262_12988295_12992439_12992526_13000599_13000913_13002885
m54284U_201203_174622/38862991/ccs	chr6	-	2934	15	NIC	ENSMUSG00000030243.17	novel	3054	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_14	40.4629460123704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCTGGTGTCTGCATT	6193	False	NA	1	True	ATTAAA	-40	NA	142332800	142307846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332444
m54284U_201203_174622/38864266/ccs	chr14	+	1901	1	Intergenic	novelGene_7567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87125621	87127522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_87125600_87127500
m54284U_201203_174622/38865606/ccs	chr8	-	5162	11	NNC	ENSMUSG00000046707.10	novel	6779	11	NA	NA	-57	1105	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	115.837342856265	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGGCTCTTCTTGATG	NA	False	NA	-2	True	AATAAA	-17	NA	96215512	96176259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203938_96214192_96214305_96215030
m54284U_201203_174622/38930901/ccs	chr16	+	5459	33	NIC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_20	348.969907146376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503178_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/38931042/ccs	chr17	-	161	1	Intergenic	novelGene_8769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	85469131	85468970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_85469000_85469100
m54284U_201203_174622/38994986/ccs	chr14	+	8072	32	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_27	42.8276316807247	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8215	False	NA	14	True	AATAAA	-21	NA	30741094	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
m54284U_201203_174622/38996582/ccs	chr5	+	3471	14	NNC	ENSMUSG00000000148.18	novel	3431	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	30.8270610390886	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690777	140705134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_140690984_140691707_140691852_140695892_140696048_140697263_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
m54284U_201203_174622/39061728/ccs	chr17	-	3159	13	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_11	533.064170360588	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTGCCTTTTTTGTTT	5740	False	NA	-5	True	AATAAA	-16	NA	33904393	33865209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33896247_33896415_33904240
m54284U_201203_174622/39126360/ccs	chr10	+	177	1	Intergenic	novelGene_5319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAGGAGTAAA	2933	False	NA	NA	False	NA	NA	NA	60081810	60081987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_60081800_60082000
m54284U_201203_174622/39127251/ccs	chr8	+	6124	4	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	0	-799	intron_retention	FALSE	canonical	3	200	junction_2	374.369692505505	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATGTACGTGTGGC	NA	False	NA	NA	False	AATAAA	-16	NA	20697984	20726467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr8_+_20698090_20711891_20712265_20717197_20717497_20721120
m54284U_201203_174622/39192189/ccs	chr4	-	2889	19	NNC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	105	junction_18	100.421042627873	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980882	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980675
m54284U_201203_174622/39323610/ccs	chr10	+	4117	18	NNC	ENSMUSG00000019978.17	novel	4115	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_17	86.0256660823588	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235753	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398198
m54284U_201203_174622/393258/ccs	chr6	+	190	1	Intergenic	novelGene_3410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	99966381	99966571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_99966400_99966600
m54284U_201203_174622/3933019/ccs	chr3	+	2186	8	NNC	ENSMUSG00000027777.16	novel	2201	8	NA	NA	-337	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	165.570627386204	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTCCTTTTGCTCACTA	NA	False	NA	21	True	AATAAA	-23	NA	68401203	68533796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_68401396_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
m54284U_201203_174622/39388978/ccs	chr4	+	2774	13	NNC	ENSMUSG00000029009.18	novel	847	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	32.4194514656453	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGGAGGCTTGCTCTTG	NA	False	NA	18	True	AAGAAA	-32	NA	148123615	148140663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_148123867_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135849_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829_148140089_148140140
m54284U_201203_174622/39389790/ccs	chr9	+	215	1	Genic_Genomic	ENSMUSG00000097467.3	novel	NA	NA	NA	NA	3628	4	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTCTTTTTAAAAA	800	False	NA	NA	False	NA	NA	NA	44033046	44033261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_44033000_44033300
m54284U_201203_174622/394151/ccs	chr6	-	181	1	Intergenic	novelGene_3463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGATTCATCCTGTCG	9085	False	NA	NA	False	NA	NA	NA	120522223	120522042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120522000_120522200
m54284U_201203_174622/39454244/ccs	chr8	-	4107	8	NIC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	462	junction_2	70.5558108803208	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	False	NA	-13	True	AATAAA	-20	NA	110419892	110397956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_110399274_110402007_110402057_110403389_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201203_174622/394712/ccs	chr13	-	180	1	Intergenic	novelGene_7128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGCAATAAAATTAATT	NA	False	NA	NA	False	NA	NA	NA	58794709	58794529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58794500_58794700
m54284U_201203_174622/39519481/ccs	chr7	-	1417	15	NIC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	257	junction_2	575.856221426062	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	-13	True	NA	-3	True	TATAAA	-16	NA	45083701	45071320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45071430_45071515_45071559_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
m54284U_201203_174622/39584167/ccs	chr3	+	3578	10	NNC	ENSMUSG00000027804.14	novel	1752	10	NA	NA	53	0	intron_retention	FALSE	canonical	3	73	junction_3	797.54397688261	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATCTCATTTTAAAAT	NA	False	NA	16	True	AATAAA	-15	NA	79498724	79510583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_79498865_79500916_79501058_79502508_79504869_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
m54284U_201203_174622/39649676/ccs	chr1	-	4995	13	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	0	443	combination_of_known_junctions	FALSE	canonical	3	18	junction_12	43.8180423265729	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30913002	30842183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30912658
m54284U_201203_174622/39650889/ccs	chr5	+	1253	8	NIC	ENSMUSG00000029310.14	novel	995	6	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	99.0728447730687	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTCAAGTTCTCCC	NA	False	NA	20	True	AATAAA	-23	NA	104194661	104213245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_104194705_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
m54284U_201203_174622/39716387/ccs	chr19	+	2651	13	NIC	ENSMUSG00000024949.18	novel	2649	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_10	355.987622678093	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	834	False	NA	22	True	AATAAA	-22	NA	6413951	6427233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424583_6424639_6424748_6424929_6426325
m54284U_201203_174622/39781838/ccs	chr1	+	3371	12	Fusion	ENSMUSG00000026455.15_ENSMUSG00000101061.2	novel	937	3	NA	NA	0	0	multi-exon	TRUE	canonical	3	12	junction_1	47.209573199224	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAAGAGAATTTGTGGG	NA	False	NA	17	True	ATTAAA	-18	NA	134363365	134418611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr1_+_134363609_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
m54284U_201203_174622/39781958/ccs	chr7	-	1292	8	NNC	ENSMUSG00000040907.16	novel	3621	23	NA	NA	18655	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	17.1499985125245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTGTGTTATGCTT	NA	False	NA	-1	True	AATATA	-18	NA	24686665	24677591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686533
m54284U_201203_174622/39846036/ccs	chr16	+	4793	26	NIC	ENSMUSG00000022770.18	novel	4663	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	100	junction_1	71.9072291219735	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTTAAATGTGTCTTGA	NA	False	NA	19	True	AATAAA	-17	NA	31482726	31692167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_31483140_31483638_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
m54284U_201203_174622/39846135/ccs	chr11	+	4449	10	NIC	ENSMUSG00000018398.19	novel	4563	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	33.8486099428282	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATGGTGTCATTTTT	NA	False	NA	17	True	ATTAAA	-19	NA	53410734	53434923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
m54284U_201203_174622/39846845/ccs	chr4	-	2215	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	5627	junction_5	153.902046770015	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994325	150981589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_150981929_150985464_150985552_150988271_150989767_150991496_150991599_150992774_150992881_150994239
m54284U_201203_174622/39911779/ccs	chr8	-	5891	14	NNC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	-268	-364	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_13	31.6824107026122	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGCCTCTGACATA	NA	False	NA	-1	True	AATAAA	-24	NA	41587031	41444452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586940
m54284U_201203_174622/39977932/ccs	chr15	+	2888	6	NNC	ENSMUSG00000035944.18	novel	3749	14	NA	NA	18941	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	5.23832034148352	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAATGTAAATAGCAGT	569	False	NA	NA	False	TTTAAA	-6	NA	85735485	85743023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_85735540_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
m54284U_201203_174622/39978629/ccs	chr10	+	4741	30	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	0	83	combination_of_known_splicesites	FALSE	canonical	3	130	junction_6	25.8465700684714	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCATCCACATTTCAT	NA	False	NA	41	True	AATAAA	-29	NA	27950849	28472045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
m54284U_201203_174622/39979429/ccs	chr4	+	3794	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	216	junction_3	561.471875223209	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTTTTTCTGTAGACT	4706	False	NA	23	True	AATAAA	-28	NA	135583442	135597219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589081_135589189_135590350_135590514_135590833_135590888_135594436
m54284U_201203_174622/3998800/ccs	chr11	+	172	1	Intergenic	novelGene_6524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAGAAATCGAG	NA	False	NA	NA	False	NA	NA	NA	121104319	121104491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_121104300_121104500
m54284U_201203_174622/3999329/ccs	chr17	+	2214	15	NIC	ENSMUSG00000058392.14	novel	4874	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	174.748332157525	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCGGATGTTCTATAAATT	NA	False	NA	-17	True	NA	NA	NA	32255383	32279547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_32255579_32264902_32264986_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
m54284U_201203_174622/4000069/ccs	chr19	-	3151	24	NIC	ENSMUSG00000056999.17	novel	5059	25	NA	NA	-101	-154	combination_of_known_splicesites	FALSE	canonical	2	23	junction_5	173.226896456511	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATGTAGAATATTTTT	NA	False	NA	-20	True	AATAAA	-13	NA	37340111	37247982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
m54284U_201203_174622/40044440/ccs	chr9	+	170	1	Intergenic	novelGene_4965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGTTTTCGAGACA	NA	False	NA	3	True	NA	NA	NA	78279007	78279177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_78279000_78279200
m54284U_201203_174622/40044608/ccs	chr17	-	1076	4	NNC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-392832	-2550	intron_retention	FALSE	canonical	3	556	junction_3	2782.01274060506	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6760607	6360818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_6361219_6361567_6362108_6365191_6365234_6760513
m54284U_201203_174622/40044889/ccs	chr3	+	2265	4	NIC	ENSMUSG00000041750.14	novel	1527	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_1	21.9291789378647	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTATTGTTTTATTA	NA	False	NA	2	True	AATAAA	-14	NA	86893857	86897087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_86894013_86894294_86895863_86896457_86896555_86896642
m54284U_201203_174622/40173843/ccs	chr3	-	1801	9	NIC	ENSMUSG00000005625.16	novel	1276	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	876	junction_3	392.570296252786	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTTTGCTTCAAATAGT	NA	False	NA	-20	True	AATAAA	-15	NA	94949856	94940014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
m54284U_201203_174622/40174722/ccs	chr2	-	2347	15	NNC	ENSMUSG00000075023.12	novel	2224	15	NA	NA	-61373	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_14	11.1785143768512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCTCCAGGCCTGCTT	NA	False	NA	-6	True	AATAAA	-17	NA	93760875	93685711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_93686126_93687041_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689791_93691361_93691463_93691813_93691892_93692118_93692217_93693135_93693203_93693444_93693515_93694263_93694335_93694736_93694797_93696026_93696575_93760610
m54284U_201203_174622/40175090/ccs	chr6	-	3256	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	51	junction_10	907.644560876607	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875683	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866869_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
m54284U_201203_174622/40240113/ccs	chr14	+	3279	5	NIC	ENSMUSG00000037536.15	novel	3418	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	35.4436171968946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47710017	47769419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47710175_47738250_47738328_47742442_47742590_47763661_47763772_47766631
m54284U_201203_174622/40240933/ccs	chr13	-	3305	12	NIC	ENSMUSG00000032745.19	novel	3694	13	NA	NA	186	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_10	340.73585901668	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTCTTTGTAGTG	NA	False	NA	-4	True	AATAAA	-15	NA	111626376	111562213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
m54284U_201203_174622/40241480/ccs	chr17	-	5345	21	NIC	ENSMUSG00000024241.8	novel	8436	22	NA	NA	0	-3352	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	28.2543801913969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGTTGATTCTTATT	NA	False	NA	NA	False	ATTAAA	-13	NA	80787882	80704531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
m54284U_201203_174622/40503224/ccs	chr9	+	5600	33	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	36.5231091228554	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9116	False	NA	19	True	AATAAA	-16	NA	108357079	108367729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108357169_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
m54284U_201203_174622/40632375/ccs	chr4	-	189	1	Intergenic	novelGene_2114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACATTGCTGTCCCCGGGG	NA	False	NA	NA	False	NA	NA	NA	126339557	126339368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_126339400_126339600
m54284U_201203_174622/40633304/ccs	chr7	-	3295	5	NNC	ENSMUSG00000030678.8	novel	2347	5	NA	NA	218	0	intron_retention	FALSE	canonical	3	387	junction_1	154.300639985711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126625978	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126622341_126622648_126622879_126623615_126623788_126624047_126625327_126625399
m54284U_201203_174622/4064162/ccs	chr17	+	167	1	Intergenic	novelGene_8398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAAAGGTA	3463	False	NA	NA	False	NA	NA	NA	23871564	23871731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_23871600_23871700
m54284U_201203_174622/40698833/ccs	chr10	-	9551	41	NNC	ENSMUSG00000001151.11	novel	9341	42	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_9	47.3778363267045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGGCTACAGCCATTC	NA	False	NA	-16	True	AATAAA	-18	NA	76278620	76187096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210453_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
m54284U_201203_174622/40699240/ccs	chr8	+	3554	1	Genic_Genomic	ENSMUSG00000031520.7	novel	NA	NA	NA	NA	-461	-88346	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	560	False	NA	NA	False	NA	NA	NA	54530179	54533733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_+_54530200_54533700
m54284U_201203_174622/40700373/ccs	chr8	-	2226	8	NIC	ENSMUSG00000037725.9	novel	2593	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	96.2770237705884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATTGATTGACTTATT	NA	False	NA	-1	True	AATAAA	-26	NA	22675835	22658460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22675699
m54284U_201203_174622/40830939/ccs	chr5	-	1916	9	NIC	ENSMUSG00000029545.14	novel	1870	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	425	junction_3	14.5811307860536	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCTGTGTCTGTCTT	9810	False	NA	-4	True	AATAAA	-18	NA	115257369	115248357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
m54284U_201203_174622/40831142/ccs	chr4	+	4505	1	Intergenic	novelGene_2086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGCCAGGTGGTGATGGC	1135	False	NA	NA	False	AAGAAA	-10	NA	123295874	123300379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_123295900_123300400
m54284U_201203_174622/40894844/ccs	chr12	-	176	1	Intergenic	novelGene_6562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTAGGACTTTCAATA	NA	False	NA	NA	False	NA	NA	NA	8976726	8976550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_8976600_8976700
m54284U_201203_174622/40961225/ccs	chr1	-	2854	17	NNC	ENSMUSG00000026355.12	novel	2910	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	133	junction_16	800.92949908216	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGTTGGATTCATTTC	NA	False	NA	-21	True	AATAAA	-17	NA	128287401	128259326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287251
m54284U_201203_174622/40961967/ccs	chr13	-	6492	11	NNC	ENSMUSG00000021339.5	novel	7035	11	NA	NA	0	-560	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	59.3461034946693	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAGTGTAATTTAATT	NA	False	NA	NA	False	NA	NA	NA	25204362	25172025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183056_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
m54284U_201203_174622/40962908/ccs	chr11	-	3600	7	NIC	ENSMUSG00000020288.14	novel	3023	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	225	junction_2	24.7655674946756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGCTTACCGCCCAG	NA	False	NA	-18	True	AATAAA	-6	NA	23447930	23440426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23445065_23446690_23446882_23447774
m54284U_201203_174622/41027056/ccs	chr5	+	4061	11	NIC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8199	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	34.4034881952397	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	8143	False	NA	19	True	AATAAA	-30	NA	73660011	73718137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
m54284U_201203_174622/41091225/ccs	chr4	+	3088	7	NNC	ENSMUSG00000028676.18	novel	2493	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_3	565.56856839428	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTAACTGGAATTAT	4706	False	NA	NA	False	AATAAA	-17	NA	135583442	135593126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_135583603_135585615_135585783_135586152_135586513_135589091_135589189_135590350_135590514_135590833_135590888_135591039
m54284U_201203_174622/41091941/ccs	chr1	-	6712	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	0	443	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	43.1286777009994	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30913002	30842183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30912658
m54284U_201203_174622/41092756/ccs	chr13	-	2059	16	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_15	1998.6743562227	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549180
m54284U_201203_174622/41093264/ccs	chr9	+	1580	10	NNC	ENSMUSG00000032399.9	novel	1538	10	NA	NA	0	-147	at_least_one_novel_splicesite	FALSE	canonical	3	407	junction_1	6034.17045348641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_64080905_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
m54284U_201203_174622/41156934/ccs	chr9	-	5230	39	NIC	ENSMUSG00000004099.17	novel	5367	39	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	490	junction_35	108.724460496474	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTAGTGATTGAGTTC	NA	False	NA	-7	True	AATAAA	-17	NA	20864141	20818504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20864003
m54284U_201203_174622/41224143/ccs	chr6	+	1445	7	NNC	ENSMUSG00000030060.15	novel	1464	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	506.962413684574	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCTCTCACCCAGTA	2979	False	NA	44	True	AATAAA	-30	NA	87890931	87913611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902617_87902793_87910223_87910417_87913071
m54284U_201203_174622/41224390/ccs	chr11	+	5190	22	NIC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-380	0	intron_retention	FALSE	canonical	3	123	junction_2	57.3345593920479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCAATGGTACAGTA	NA	False	NA	33	True	AATAAA	-29	NA	21188900	21271136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
m54284U_201203_174622/41288645/ccs	chr2	+	4151	19	NNC	ENSMUSG00000027363.16	novel	4145	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	90.2496537389479	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAAACCTTGTACAT	3593	False	NA	6	True	ATTAAA	-20	NA	126549279	126601217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_126549408_126559914_126560108_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
m54284U_201203_174622/41289399/ccs	chr8	-	6470	22	NNC	ENSMUSG00000001995.10	novel	6690	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_20	48.3676397132274	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGAAGCAGTGTTGCCT	NA	False	NA	-6	True	AATAAA	-18	NA	126296547	126144812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126166002_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849_126219405_126246584_126246646_126296393
m54284U_201203_174622/41290134/ccs	chr2	-	6754	20	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	389	junction_17	196.49011591164	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9785	False	NA	-6	True	AATAAA	-21	NA	120394324	120337300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
m54284U_201203_174622/41290274/ccs	chr3	+	1543	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	0	231	combination_of_known_splicesites	FALSE	canonical	3	22	junction_3	780.454482977707	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCTTTTAGACAACTA	NA	False	NA	12	True	AATAAA	-13	NA	138233045	138262206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_138233076_138252081_138252189_138253419_138253516_138256653_138256768_138259342_138259483_138261150
m54284U_201203_174622/41290567/ccs	chr19	+	5674	26	NNC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	0	-591	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_18	225.129921600839	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36811631	36870286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856861_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
m54284U_201203_174622/4129136/ccs	chr19	+	170	1	Intergenic	novelGene_9124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGTAAAGAAAATAA	NA	False	NA	NA	False	NA	NA	NA	6839713	6839883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6839700_6839900
m54284U_201203_174622/4131273/ccs	chrX	-	3286	9	NIC	ENSMUSG00000036782.14	novel	3251	9	NA	NA	3358	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_6	366.28779668452	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGCTCTGTGCCATGCC	NA	False	NA	-23	True	AATAAA	-14	NA	23227934	23085524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23181368_23181441_23227732
m54284U_201203_174622/41355417/ccs	chrX	+	5252	6	NIC	ENSMUSG00000043384.16	novel	5640	10	NA	NA	0	4386	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.9549365401433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGATTGAGTGCCC	NA	False	NA	NA	False	ATTAAA	-11	NA	134643481	134667125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_134643728_134644190_134644272_134645247_134645325_134649404_134649532_134652693_134652767_134662477
m54284U_201203_174622/41420527/ccs	chr6	-	2630	6	NNC	ENSMUSG00000039159.17	novel	4657	7	NA	NA	-28677	-1676	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	129.181422813035	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTGATATTGATGGA	NA	False	NA	-1	True	AATAAA	-17	NA	30272479	30212963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30272265
m54284U_201203_174622/41484422/ccs	chr11	+	7289	21	NIC	ENSMUSG00000025571.14	novel	8847	22	NA	NA	0	-209	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	19.6913051878234	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTTGAACTGTGGCCA	NA	False	NA	NA	False	TATAAA	-19	NA	117545638	117652881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
m54284U_201203_174622/41485310/ccs	chr12	-	2960	10	NIC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	11114	junction_6	1565.42138057631	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662723	110657461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
m54284U_201203_174622/41486233/ccs	chr14	+	3654	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	116.114968675073	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043975	32070108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_32044074_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
m54284U_201203_174622/41551974/ccs	chr1	-	3481	14	NNC	ENSMUSG00000004880.12	novel	3510	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_5	595.485690088848	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCTGTTAGAGCCTCA	NA	False	NA	-50	True	AATAAA	-33	NA	181669944	181642899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648267_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
m54284U_201203_174622/41551981/ccs	chr11	-	3031	18	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-64	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_14	9.61328377369018	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAGAGTGGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	79037297	78907861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
m54284U_201203_174622/41552482/ccs	chr11	+	1943	2	NNC	ENSMUSG00000042650.4	novel	5730	4	NA	NA	18570	0	at_least_one_novel_splicesite	TRUE	canonical	2	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTTTGAGTTTTT	3063	False	NA	4	True	NA	NA	NA	60447373	60449338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_60448511_60448532
m54284U_201203_174622/41616238/ccs	chr4	-	1861	9	NIC	ENSMUSG00000032897.18	novel	1932	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_7	133.008399640775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTGTGTCTGGGACATT	NA	False	NA	-1	True	AATAAA	-20	NA	120682904	120614634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120647573_120647687_120682726
m54284U_201203_174622/41616587/ccs	chr10	+	3561	27	NIC	ENSMUSG00000040675.18	novel	3669	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_13	89.6994653431125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTCAGCTAGTAAAGCCA	NA	False	NA	14	True	AATAAA	-19	NA	3923117	4106111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
m54284U_201203_174622/41616657/ccs	chr16	-	5957	15	NIC	ENSMUSG00000039738.17	novel	5706	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_12	14.9829835452879	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTAGACACTCCTCTC	NA	False	NA	20	True	AATAAA	-36	NA	3821634	3796996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3816981_3817210_3818816_3819543_3821595
m54284U_201203_174622/41616930/ccs	chr17	+	3174	11	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_5	190.350439978478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1236	False	NA	12	True	AATAAA	-20	NA	24888720	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
m54284U_201203_174622/41617385/ccs	chr3	+	6687	40	NIC	ENSMUSG00000041977.19	novel	6776	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_20	20.0595759618992	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATTGTGGTTGTATGAT	6168	False	NA	12	True	AAGAAA	-13	NA	87524881	87645341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87526100_87590792_87590885_87591774_87591874_87593305_87593356_87594221_87594280_87595120_87595300_87596085_87596158_87604651_87604698_87605294_87605372_87606071_87606210_87609464_87609540_87609761_87609864_87616870_87616970_87618806_87618850_87620317_87620415_87620527_87620651_87623291_87623316_87624336_87624482_87624730_87624828_87625535_87625566_87629663_87629791_87632785_87632966_87633043_87633092_87633270_87633459_87633678_87633826_87634441_87634522_87634676_87634803_87635269_87635388_87635822_87636002_87636511_87636588_87636791_87636960_87637715_87637807_87638482_87638609_87639088_87639151_87639966_87640180_87640454_87640812_87641730_87641860_87642651_87642879_87643112_87643303_87644350
m54284U_201203_174622/41617485/ccs	chr9	+	4308	10	ISM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	485	0	0	0	3prime_fragment	FALSE	canonical	3	141	junction_1	164.63899902514	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1659	False	NA	64	True	NA	NA	NA	108394797	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201203_174622/41617917/ccs	chr1	-	184	1	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATGAACAAAAGAAAGAA	7994	False	NA	NA	False	NA	NA	NA	36701947	36701763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_36701800_36701900
m54284U_201203_174622/41681144/ccs	chr5	-	5506	31	NIC	ENSMUSG00000038095.16	novel	10071	32	NA	NA	0	1370	combination_of_known_junctions	FALSE	canonical	3	24	junction_30	107.715283141355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563977	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563909
m54284U_201203_174622/41682407/ccs	chrX	+	6097	40	NNC	ENSMUSG00000031314.19	novel	7331	39	NA	NA	-5108	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_39	65.2100938851509	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGAGTGATTTTAAGTAG	NA	False	NA	NA	False	AATAAA	-24	NA	100571231	100644640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_100571293_100576457_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914_100642980_100644098
m54284U_201203_174622/41748792/ccs	chr5	-	2501	10	NIC	ENSMUSG00000029510.16	novel	2586	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_8	7.64166616179973	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGGCTCTCTGTGTGTG	1721	False	NA	-2	True	AATAAA	-18	NA	138278267	138271918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_138272832_138273716_138273887_138273968_138274109_138274190_138274338_138274469_138274601_138274845_138275009_138275668_138275750_138276476_138276717_138277100_138277260_138277910
m54284U_201203_174622/41813108/ccs	chr5	-	5599	31	NNC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	1370	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_27	106.823946545499	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563673	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545248_124546539_124546641_124548132_124548446_124552461_124552591_124563509
m54284U_201203_174622/41814098/ccs	chr3	+	2706	15	NIC	ENSMUSG00000028101.19	novel	2858	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	47.4118408529053	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGGGAAGGGATGTTGT	2646	False	NA	16	True	AATAAA	-26	NA	96603757	96613289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96603848_96606735_96606970_96607074_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
m54284U_201203_174622/41814311/ccs	chr6	+	3457	6	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	18.7125626251457	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGCCTGTGTGTGCT	NA	False	NA	12	True	ATTAAA	-17	NA	127430582	127471203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_127430786_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
m54284U_201203_174622/41880344/ccs	chr4	-	744	6	NIC	ENSMUSG00000028964.15	novel	908	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	66	junction_5	2285.59791739492	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTGTCTGGGGTCTTT	NA	False	NA	-1	True	AATAAA	-26	NA	150994325	150981589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150994239
m54284U_201203_174622/41943282/ccs	chr11	-	3524	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_4	206.253715218229	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_100239306_100239477_100240446_100242035_100242128_100242243_100242382_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201203_174622/41943839/ccs	chr8	+	655	5	NIC	ENSMUSG00000031818.13	novel	745	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3838.77288335739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTGGTTCATTCTT	NA	False	NA	28	True	AATAAA	-17	NA	121395046	121400946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_121395091_121396047_121396122_121399463_121399632_121399959_121400092_121400709
m54284U_201203_174622/41945896/ccs	chr9	-	195	1	Intergenic	novelGene_4800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGGTCAGTTTGTGTG	614	False	NA	NA	False	NA	NA	NA	57480436	57480241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_57480200_57480400
m54284U_201203_174622/4195360/ccs	chr4	+	5245	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	132.783492130283	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/4195658/ccs	chr4	-	3747	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	423.355993908028	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201203_174622/4196421/ccs	chr8	+	2306	16	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	129	junction_1	113.803026712337	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415917	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201203_174622/42008640/ccs	chr10	-	182	1	Intergenic	novelGene_5521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTTAAATCTTCCCTT	1915	False	NA	NA	False	NA	NA	NA	96389792	96389610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_96389600_96389800
m54284U_201203_174622/42074236/ccs	chr3	-	1120	1	Intergenic	novelGene_1645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACTTTGTAAGAATTAA	5085	False	NA	NA	False	NA	NA	NA	116657563	116656443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_116656400_116657600
m54284U_201203_174622/42075567/ccs	chr5	-	2746	10	NIC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	595	junction_3	32.8039443578375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCCTTGGGCTTCTAC	NA	False	NA	-23	True	AATAAA	-15	NA	117254063	117230501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
m54284U_201203_174622/42076649/ccs	chr5	+	180	1	Intergenic	novelGene_2703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGATTCATTTTGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	102879118	102879298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_102879100_102879300
m54284U_201203_174622/42140544/ccs	chr9	+	3617	6	NIC	ENSMUSG00000047412.17	novel	3157	6	NA	NA	-243	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	133.52992174041	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAACTTTTGTGTAAT	NA	False	NA	32	True	ATTAAA	-35	NA	30941696	30981529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978256_30980040
m54284U_201203_174622/42142171/ccs	chr13	-	1472	5	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	56.3427013906859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955824	91944651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_91945374_91948729_91948823_91948984_91949136_91953869_91954280_91955728
m54284U_201203_174622/42207921/ccs	chr15	-	4211	30	ISM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	0	11933	0	3702	5prime_fragment	FALSE	canonical	2	16	junction_29	10.4608436988512	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCCTGGGGCCGTGTGGCT	1028	False	NA	NA	False	NA	NA	NA	76079910	76067108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76079623
m54284U_201203_174622/42208053/ccs	chr2	+	5625	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	81.7586540291027	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	False	NA	9	True	AATAAA	-18	NA	156038653	156151872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109094_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
m54284U_201203_174622/42338209/ccs	chr6	+	4511	18	NIC	ENSMUSG00000038538.18	novel	14644	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_14	13.1069595079581	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	18	True	NA	NA	NA	38410884	38479514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
m54284U_201203_174622/42338315/ccs	chr19	+	5560	17	NNC	ENSMUSG00000033478.6	novel	5951	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_11	26.2308710063162	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAACATTGTCGTATA	NA	False	NA	2	True	AATAAA	-13	NA	57349461	57378018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370691_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
m54284U_201203_174622/42338906/ccs	chr12	+	4117	13	NNC	ENSMUSG00000017843.15	novel	956	8	NA	NA	-1680	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	330.420943646131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTCTATGAAACTAAATT	3240	False	NA	3	True	AATAAA	-17	NA	110450491	110549496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_110450715_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
m54284U_201203_174622/42467876/ccs	chr11	+	3833	25	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	combination_of_known_splicesites	FALSE	canonical	3	11	junction_8	565.507071807143	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332202	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
m54284U_201203_174622/42469691/ccs	chr7	+	3496	16	NNC	ENSMUSG00000030774.14	novel	2794	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	74.1309352130105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAAGTGTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-20	NA	97437747	97561588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_97438182_97480061_97480266_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
m54284U_201203_174622/42534382/ccs	chr10	+	180	1	Intergenic	novelGene_5454	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATCAGAATTTCA	NA	False	NA	NA	False	NA	NA	NA	80778224	80778404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80778200_80778400
m54284U_201203_174622/42534758/ccs	chr2	-	10461	37	NIC	ENSMUSG00000057133.15	novel	10515	37	NA	NA	0	-104	combination_of_known_junctions	FALSE	canonical	3	17	junction_34	19.0250606332481	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGCCTCTTCATCTAAT	NA	False	NA	-127	True	TTTAAA	-15	NA	160950995	160789001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884050_160894307_160894826_160901838_160901895_160950908
m54284U_201203_174622/42535552/ccs	chr11	-	1247	4	Intergenic	novelGene_5772	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_2	5.79271573232759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCTCAAAATCGTGGTA	NA	False	NA	-8	True	AATAAA	-19	NA	33494291	33487366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_33487917_33490994_33491103_33492017_33492568_33494252
m54284U_201203_174622/42599931/ccs	chr17	-	331	3	NIC	ENSMUSG00000055839.7	novel	537	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_2	5693	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGACTTTTCTGTTC	NA	False	NA	-36	True	AATAAA	-18	NA	24048110	24043782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24043954_24046441_24046548_24048056
m54284U_201203_174622/42600436/ccs	chr17	-	235	1	Intergenic	novelGene_8773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATACTAAGCTCCAGGTC	NA	False	NA	NA	False	AAGAAA	-36	NA	86245894	86245659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_86245700_86245900
m54284U_201203_174622/4260572/ccs	chr4	-	1538	11	NNC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	207	junction_10	436.918573649599	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830710	124812257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381_124830522_124830609
m54284U_201203_174622/4261061/ccs	chr19	-	4473	19	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_14	39.6848697728604	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATTATTTTCTAATT	NA	False	NA	-16	True	ATTAAA	-15	NA	14575415	14425513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442649_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495341_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
m54284U_201203_174622/42732207/ccs	chr2	-	7876	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39377	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_32	40.5478804901674	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1547	False	NA	-4	True	AATAAA	-19	NA	59881037	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
m54284U_201203_174622/42796068/ccs	chr6	+	3019	6	NIC	ENSMUSG00000029767.17	novel	2670	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	374.656429278879	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTATGTGTCTTTTATT	-1	True	NA	115	True	AATAAA	-19	NA	29348117	29376671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_29348208_29356469_29356697_29366038_29366206_29366915_29366977_29372469_29372670_29374397
m54284U_201203_174622/42797174/ccs	chr10	+	2083	12	NIC	ENSMUSG00000019845.9	novel	2929	12	NA	NA	0	105	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	44.0810673177019	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAAACGGCTGCTACGG	NA	False	NA	16	True	AATAAA	-16	NA	39010018	39026198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020569_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
m54284U_201203_174622/42861782/ccs	chr14	-	1435	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-4972	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_10	106.982989302038	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607891	59586180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607693
m54284U_201203_174622/42928632/ccs	chr15	+	2183	12	NIC	ENSMUSG00000022556.12	novel	2084	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_10	34.6941774713456	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACATATATATATA	7121	False	NA	18	True	NA	NA	NA	76361621	76385178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384537_76384616
m54284U_201203_174622/42928639/ccs	chr5	-	3660	19	NIC	ENSMUSG00000011831.17	novel	5849	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	51.3541624408382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTACTTCTTGCTAAT	NA	False	NA	-7	True	ATTAAA	-12	NA	108017034	107895141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108016656
m54284U_201203_174622/42993027/ccs	chr17	+	3288	13	NIC	ENSMUSG00000024180.15	novel	3464	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_12	107.829694683587	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTCTTTTTTTTTTT	NA	False	NA	20	True	NA	NA	NA	26332316	26342228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26341060
m54284U_201203_174622/42993615/ccs	chr2	+	3688	21	NIC	ENSMUSG00000026790.20	novel	403	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_1	276.935913164039	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	6642	False	NA	14	True	AATAAA	-14	NA	29779245	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779291_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201203_174622/43057326/ccs	chr11	+	2559	28	NIC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_19	164.041623745279	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTTTTATATCTTAGGA	NA	False	NA	8	True	AATAAA	-20	NA	29080743	29111680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_29080919_29082844_29082906_29083855_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
m54284U_201203_174622/43058433/ccs	chr6	+	3252	13	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	0	-52	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	176.881080578638	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGTTTCCAATTCTTA	13	True	NA	17	True	ATTAAA	-29	NA	30048027	30153127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30090267_30090304_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
m54284U_201203_174622/43122804/ccs	chr17	+	176	1	Intergenic	novelGene_8348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTAAAGTCTT	NA	False	NA	NA	False	NA	NA	NA	6210375	6210551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_6210400_6210600
m54284U_201203_174622/43123889/ccs	chr13	-	4148	9	NNC	ENSMUSG00000021371.6	novel	4339	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	84.6596125670322	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGTACAGTGTTTTA	NA	False	NA	NA	False	AATAAA	-29	NA	43713667	43691868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_43694985_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
m54284U_201203_174622/43124340/ccs	chr11	+	2904	1	FSM	ENSMUSG00000044068.8	ENSMUST00000049506.8	4492	1	0	1588	0	394	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTGTCTGAATCTGT	NA	False	NA	10	True	AATATA	-16	NA	22922004	22924908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_22922000_22924900
m54284U_201203_174622/43124895/ccs	chr5	-	120	1	Intergenic	novelGene_2942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTGTCTGAAGACAGC	626	False	NA	NA	False	NA	NA	NA	129704350	129704230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129704200_129704400
m54284U_201203_174622/43125260/ccs	chr5	+	3041	18	NIC	ENSMUSG00000029221.16	novel	5711	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_2	108.293143108373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTACGGTAGTTTTCAATC	396	False	NA	15	True	AATAAA	-18	NA	67464307	67513129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_67464541_67473020_67473189_67482019_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
m54284U_201203_174622/43188372/ccs	chr17	-	1876	6	NNC	ENSMUSG00000023973.14	novel	1908	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	192.284788789961	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGCTACTGCTATGAA	NA	False	NA	-18	True	NA	NA	NA	47063121	47046681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_47047873_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
m54284U_201203_174622/43189309/ccs	chr17	-	185	1	Intergenic	novelGene_8686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGTCTGAAAGAGTTAA	NA	False	NA	NA	False	NA	NA	NA	66766997	66766812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66766800_66767000
m54284U_201203_174622/43190748/ccs	chr5	+	246	1	Intergenic	novelGene_2477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCCTAACTAAGACAAC	NA	False	NA	NA	False	NA	NA	NA	21232791	21233037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_21232800_21233000
m54284U_201203_174622/43190920/ccs	chr16	+	5710	11	NIC	ENSMUSG00000022897.16	novel	5759	12	NA	NA	-250	-213	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	49.351393090773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCAGAGTCTTTACTA	NA	False	NA	9	True	GATAAA	-14	NA	94370618	94495713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_94371394_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
m54284U_201203_174622/4326801/ccs	chr9	-	5424	17	NIC	ENSMUSG00000032504.16	novel	5951	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	268	junction_2	36.4638091125982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATTGTTATGTTTTGTCA	NA	False	NA	-8	True	AATAAA	-17	NA	113537327	113483539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
m54284U_201203_174622/43319467/ccs	chr10	+	2900	12	NIC	ENSMUSG00000020212.15	novel	2922	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	33.7594798440207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977715	118004902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_117977868_117978754_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
m54284U_201203_174622/43320390/ccs	chr4	+	2416	9	NIC	ENSMUSG00000059939.14	novel	2528	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	67.7595703572565	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8271	False	NA	22	True	NA	NA	NA	156194454	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
m54284U_201203_174622/43320684/ccs	chr3	+	1512	8	NIC	ENSMUSG00000027562.13	novel	1788	7	NA	NA	0	-193	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	37.7661980385333	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTTGTAGCAAAGTTA	NA	False	NA	11	True	ATTAAA	-21	NA	14951332	14965637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_14951432_14951669_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
m54284U_201203_174622/43386695/ccs	chr9	-	189	1	Intergenic	novelGene_4985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	86258263	86258074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_86258100_86258300
m54284U_201203_174622/43451614/ccs	chr17	-	6267	11	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	462	junction_7	63.4924404949125	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540159	32522647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32536321_32536819_32536853_32537744_32537784_32540058
m54284U_201203_174622/43517181/ccs	chr16	-	3515	16	NIC	ENSMUSG00000022515.7	novel	2398	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	59	junction_1	13.1182654679988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGGGGGCTCATTTGT	8191	False	NA	-5	True	AATAAA	-13	NA	4782069	4759299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
m54284U_201203_174622/43581741/ccs	chr2	-	6374	20	NIC	ENSMUSG00000017670.17	novel	3466	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	269	junction_19	30.9689326946178	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCTTCCTATCCACACC	NA	False	NA	-17	True	AATAAA	-15	NA	165168399	165131074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
m54284U_201203_174622/43582522/ccs	chr9	+	4442	15	NIC	ENSMUSG00000054693.15	novel	4593	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	71.582583960979	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGGTCTATGCTCTTTG	4950	False	NA	14	True	AATAAA	-19	NA	70586278	70687511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_70586542_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
m54284U_201203_174622/43713534/ccs	chr10	+	185	1	Intergenic	novelGene_5519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGTAGCATGCACAAGG	1324	False	NA	NA	False	NA	NA	NA	95731659	95731844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_95731700_95731800
m54284U_201203_174622/43843706/ccs	chr8	+	2792	21	NIC	ENSMUSG00000052566.9	novel	2580	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	335	junction_11	39.5465232352984	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCGTTTTTGCCTATCTG	NA	False	NA	18	True	AATAAA	-14	NA	85717231	85729978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
m54284U_201203_174622/43910054/ccs	chr9	+	1917	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_5	564.138751205982	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATTTTTGCTTCTA	NA	False	NA	16	True	AATAAA	-16	NA	65537840	65567810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558900_65558987_65566416_65566487_65566719
m54284U_201203_174622/43910918/ccs	chr8	+	3770	10	NIC	ENSMUSG00000034518.15	novel	3989	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	36.3790062916159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTTAGCTGTCTTT	NA	False	NA	32	True	ATTAAA	-23	NA	75720306	75758606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_75720378_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
m54284U_201203_174622/43911040/ccs	chr4	+	2360	9	NNC	ENSMUSG00000028410.14	novel	5622	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	1170.94286261115	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGTGTCACTGCAGGC	-27	True	NA	5	True	AATATA	-17	NA	40722929	40733900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732080_40732177_40732727
m54284U_201203_174622/43911663/ccs	chr9	-	198	1	Intergenic	novelGene_4808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTGGGAAGGTTTTAC	2225	False	NA	NA	False	NA	NA	NA	58100089	58099891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58099900_58100100
m54284U_201203_174622/4391875/ccs	chr3	+	2844	8	NNC	ENSMUSG00000027601.14	novel	2953	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_4	389.80685955368	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTTGTATATTTATCTC	NA	False	NA	50	True	AATAAA	-36	NA	19242428	19274981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269588_19269868_19271343_19271588_19272325_19272486_19273201
m54284U_201203_174622/4391950/ccs	chr2	+	3166	19	NNC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	154	junction_18	127.170586318894	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	656	False	NA	36	True	AATAAA	-37	NA	31462825	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505699_31506190
m54284U_201203_174622/44041077/ccs	chr1	+	1646	7	NIC	ENSMUSG00000026150.15	novel	1715	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	326	junction_5	73.6809940818451	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTCTATGGAAAGATT	NA	False	NA	13	True	AATAAA	-13	NA	82702639	82730111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82728240_82728326_82729305
m54284U_201203_174622/44042222/ccs	chr11	-	1804	7	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	763	junction_6	34.4722110305291	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	486	False	NA	-6	True	AATAAA	-16	NA	116029615	116022646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116026152_116029267_116029448_116029536
m54284U_201203_174622/44107376/ccs	chr4	+	3527	17	NIC	ENSMUSG00000028919.12	novel	663	4	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	14.2531520636665	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATGTAGCATCTGCTTC	378	False	NA	14	True	TTTAAA	-18	NA	140966890	140984875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_140967182_140967942_140968056_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
m54284U_201203_174622/44171860/ccs	chr5	-	5710	14	NIC	ENSMUSG00000029673.20	novel	4217	14	NA	NA	-207	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	9.03379584978658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCAGATGTTTCTTTGT	NA	False	NA	-5	True	ATTAAA	-14	NA	131567051	131466170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_131469532_131472293_131472517_131474236_131474321_131475644_131475723_131480721_131480864_131486676_131486749_131488964_131488995_131490119_131490192_131494869_131494966_131501096_131501318_131503760_131504015_131505390_131505863_131562659_131562712_131566498
m54284U_201203_174622/44172916/ccs	chr13	-	2332	12	NNC	ENSMUSG00000021572.10	novel	3641	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	30.6737026303942	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCACTCTTTTTG	NA	False	NA	1	True	NA	NA	NA	74210418	74185750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198355_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
m54284U_201203_174622/44237887/ccs	chr6	+	1813	11	NIC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	329.176563564298	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTGCGCATCAAGGCAT	NA	False	NA	NA	False	NA	NA	NA	50087228	50175404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_50087445_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
m54284U_201203_174622/44302914/ccs	chr7	+	4005	13	NNC	ENSMUSG00000040268.18	novel	743	7	NA	NA	219	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	67.0066331708204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCTTTTATTTGGTTC	NA	False	NA	23	True	AATAAA	-25	NA	130467858	130515042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_130468422_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
m54284U_201203_174622/44304587/ccs	chr6	-	3721	25	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	0	-1626	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	45.5182350517045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGTTATGTCATTTCAT	NA	False	NA	NA	False	CATAAA	-25	NA	148732965	148673816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148674305_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
m54284U_201203_174622/44368000/ccs	chr7	+	3569	16	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_2	86.111142652324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247959	130366515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130248161_130264745_130264872_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
m54284U_201203_174622/44369568/ccs	chr7	-	4531	25	NIC	ENSMUSG00000031075.20	novel	4566	25	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_12	7.42637473244292	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTCTCTCCTGGCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	144232622	144142285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144202311_144202378_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370
m54284U_201203_174622/44369996/ccs	chr12	+	3715	12	NIC	ENSMUSG00000021282.18	novel	3547	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	672.965940464147	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTGTCTGCTTTAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	111504649	111513022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506346_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
m54284U_201203_174622/44370037/ccs	chr4	+	4311	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_4	142.221061906551	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225248	107273543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232279_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
m54284U_201203_174622/44433665/ccs	chr16	+	3188	10	NIC	ENSMUSG00000022833.8	novel	4107	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_5	45.3352396113364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGAATTTGTTTACT	NA	False	NA	7	True	AATATA	-16	NA	34511079	34545564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
m54284U_201203_174622/44435266/ccs	chr8	-	157	1	Intergenic	novelGene_4293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48218474	48218317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_48218300_48218500
m54284U_201203_174622/44565865/ccs	chrX	-	5229	36	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_25	84.0379408969787	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACTGTGTTTTGTTTTG	4277	False	NA	-2	True	AATAAA	-19	NA	92675761	92348372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
m54284U_201203_174622/44567198/ccs	chr13	+	208	1	Intergenic	novelGene_7059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAGCCACGGAGTAGCA	NA	False	NA	NA	False	AAAACA	-8	NA	49145355	49145563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_49145400_49145600
m54284U_201203_174622/4457006/ccs	chr1	+	3333	16	NNC	ENSMUSG00000070732.3	novel	3851	16	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_12	41.5785200955173	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGACTCCAAGCTGTAT	4250	False	NA	32	True	TATAAA	-20	NA	91072810	91098015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_91072892_91077804_91077896_91079886_91081383_91081615_91081675_91083106_91083278_91084376_91084561_91084639_91084663_91084785_91084871_91090079_91090195_91090773_91090903_91092635_91092716_91092816_91092888_91094550_91094807_91096414_91096561_91096678_91096819_91097809
m54284U_201203_174622/44762130/ccs	chr2	+	3554	18	NIC	ENSMUSG00000026821.17	novel	3590	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	12.5469361015481	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTTTTACTGTTTTT	NA	False	NA	25	True	ATTAAA	-26	NA	28403337	28443093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_28403573_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
m54284U_201203_174622/44763173/ccs	chr13	+	3110	20	NIC	ENSMUSG00000021314.14	novel	3224	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_16	15.1494859717337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTCTTTTTCAAGAGTG	NA	False	NA	19	True	AATAAA	-24	NA	19132520	19335091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_19132672_19230122_19230204_19261500_19261556_19268374_19268470_19270692_19270789_19278922_19279031_19280176_19280263_19284062_19284139_19284741_19284825_19287041_19287181_19288400_19288530_19297272_19297390_19300406_19300431_19302321_19302346_19304765_19304799_19305444_19305502_19321705_19321913_19323341_19323603_19326134_19326237_19333905
m54284U_201203_174622/44763812/ccs	chr2	-	2325	10	NIC	ENSMUSG00000033096.8	novel	2235	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	33.5227948980657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCTGATTATTACT	999	False	NA	NA	False	AATAAA	-15	NA	150450487	150424999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150441647_150441738_150442163_150442281_150450307
m54284U_201203_174622/44826958/ccs	chr1	-	2376	14	NNC	ENSMUSG00000026234.13	novel	8202	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	54	junction_13	2044.0128851248	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGACTTAATACTTCCT	NA	False	NA	-28	True	AGTAAA	-16	NA	86286691	86278216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286546
m54284U_201203_174622/44828227/ccs	chr8	-	234	1	Intergenic	novelGene_4322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGGGCAGAGGATATATG	NA	False	NA	NA	False	NA	NA	NA	70679782	70679548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_70679500_70679800
m54284U_201203_174622/44828285/ccs	chr7	+	5248	10	ISM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	20615	0	-16616	0	3prime_fragment	FALSE	canonical	0	0	junction_1	7.08676387515643	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACGGTGTGATGATTAT	NA	False	NA	22	True	AATAAA	-34	NA	80727962	80755360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_80728582_80741894_80743933_80744654_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
m54284U_201203_174622/44892355/ccs	chr11	+	2553	10	NIC	ENSMUSG00000059552.14	novel	1822	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	351	junction_9	553.036220991352	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTTTGAGAGGTTGAT	NA	False	NA	16	True	AATAAA	-17	NA	69471230	69482699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
m54284U_201203_174622/44894987/ccs	chr12	-	5453	1	FSM	ENSMUSG00000113612.2	ENSMUST00000222538.2	161	1	-4811	-481	-4811	481	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	17950284	17944831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_17944800_17950300
m54284U_201203_174622/44958738/ccs	chr19	+	2174	14	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	92	junction_2	165.00869620261	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_45352326_45411571_45411680_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
m54284U_201203_174622/44958945/ccs	chr5	-	1536	6	NNC	ENSMUSG00000029319.9	novel	1743	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_4	138.229374591655	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGCGACTCTTCATTACAG	NA	False	NA	-1	True	AATAAA	-20	NA	100822115	100802588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809784_100811445_100811568_100821854
m54284U_201203_174622/44959743/ccs	chr10	-	1975	11	NIC	ENSMUSG00000036112.16	novel	4424	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	309	junction_10	575.406508479006	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGATACATTTTAATGT	NA	False	NA	-17	True	AATAAA	-15	NA	93725670	93696790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722961_93725399
m54284U_201203_174622/45091359/ccs	chr14	+	1944	9	NIC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	532.016447114185	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGGACTCCCCATGCT	9014	False	NA	27	True	ATTAAA	-24	NA	55777845	55786329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
m54284U_201203_174622/45155548/ccs	chr14	-	1967	6	NNC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	0	793	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	109.924337614561	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216987	31200748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215925_31216858
m54284U_201203_174622/45155898/ccs	chr2	+	1252	4	NNC	ENSMUSG00000026857.10	novel	1387	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	243.826896702467	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGGATGTATGT	NA	False	NA	27	True	AATAAA	-33	NA	30697968	30713045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_30698096_30709640_30709845_30710464_30710714_30712373
m54284U_201203_174622/45156174/ccs	chr11	+	4192	5	ISM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	0	39266	0	-25128	5prime_fragment	FALSE	canonical	3	93	junction_3	5.40832691319598	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGCTTTTCTTTAATTG	NA	False	NA	NA	False	GATAAA	-16	NA	117545638	117614999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775
m54284U_201203_174622/45219982/ccs	chr12	+	1429	8	NIC	ENSMUSG00000004788.12	novel	1605	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	119.526446565484	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTTCGTTTATTGTTC	NA	False	NA	31	True	AATAAA	-16	NA	85266286	85273267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_85266499_85266595_85266708_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
m54284U_201203_174622/45220728/ccs	chr14	-	5418	23	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_11	49.6311394187157	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATGTTTGAGTTGTA	NA	False	NA	-6	True	AATAAA	-16	NA	26256086	26134329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
m54284U_201203_174622/45220840/ccs	chr8	+	1960	14	NNC	ENSMUSG00000011306.8	novel	2681	14	NA	NA	0	-383	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_7	139.368058109819	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGTTCCTGCTGTTGCC	2378	False	NA	20	True	ATTAAA	-25	NA	70495683	70524614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517603_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
m54284U_201203_174622/45221161/ccs	chr12	+	2092	25	NNC	ENSMUSG00000020952.11	novel	2096	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_15	99.7115283650235	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTATTCTTGTTTGAA	NA	False	NA	15	True	AATAAA	-15	NA	51424363	51496884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472823_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
m54284U_201203_174622/4522926/ccs	chr2	+	1386	3	NNC	ENSMUSG00000027313.4	novel	1637	3	NA	NA	63	-67	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	280	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGCCAGAATATGGTTT	7215	False	NA	14	True	CATAAA	-14	NA	119181772	119184795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_119181997_119182837_119182874_119183669
m54284U_201203_174622/4524179/ccs	chr6	-	3709	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	759	junction_15	55.6755371065135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTACGGGGGCTGAC	7856	False	NA	-27	True	AATACA	-9	NA	124806447	124792000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
m54284U_201203_174622/4524615/ccs	chr19	-	1780	15	NIC	ENSMUSG00000024830.18	novel	4586	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_13	28.8473285998364	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGGCTTTTGCCGGACTC	2749	False	NA	1	True	AGTAAA	-17	NA	4213353	4206790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212718_4212820_4212862_4213166
m54284U_201203_174622/45287802/ccs	chr2	+	3865	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	0	137	combination_of_known_splicesites	FALSE	canonical	2	12	junction_13	13.435276947896	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGAATATTCTTTCA	NA	False	NA	12	True	ACTAAA	-29	NA	104716668	104830219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104775761_104775801_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104820212_104820397_104821424_104822898_104824813_104824948_104829307
m54284U_201203_174622/45353274/ccs	chr10	+	1379	8	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	1949.60441827441	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899472	126903166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901950_126902106_126902797
m54284U_201203_174622/45416460/ccs	chr12	+	3966	6	NIC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	-600	intron_retention	FALSE	canonical	3	190	junction_4	20.4117613154769	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120040	113129068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_113120192_113120294_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
m54284U_201203_174622/45483336/ccs	chr13	+	1507	2	Intergenic	novelGene_7313	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTTTTGTAACTTAGT	1864	False	NA	2	True	AATAAA	-13	NA	113872543	113876376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_113872828_113875153
m54284U_201203_174622/45484345/ccs	chr7	+	2184	7	NNC	ENSMUSG00000045411.17	novel	2092	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_3	313.179084373285	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43896248_43896661_43896841_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/45484852/ccs	chr14	+	1877	16	NIC	ENSMUSG00000036023.7	novel	1894	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	196.861327391192	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTTTGGGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	51045382	51058758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_51045445_51047462_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
m54284U_201203_174622/45547882/ccs	chr14	-	5560	7	NIC	ENSMUSG00000021965.4	novel	2260	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	189	junction_2	23.185843381972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTTATGTTGCCAACTC	NA	False	NA	-7	True	AATAAA	-19	NA	58063620	58044017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_58044989_58045431_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
m54284U_201203_174622/45549877/ccs	chr2	-	193	1	Intergenic	novelGene_1060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCAGAGCAGGATGGGGT	NA	False	NA	NA	False	NA	NA	NA	128138764	128138571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_128138600_128138800
m54284U_201203_174622/45613995/ccs	chr9	+	4217	24	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_8	163.90230618736	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCCTTTTTGAAAT	NA	False	NA	20	True	AATAAA	-26	NA	48896684	48953817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922565_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
m54284U_201203_174622/45614990/ccs	chr1	-	176	1	Genic_Genomic	ENSMUSG00000067851.12	novel	NA	NA	NA	NA	-57	-431	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	1528	False	NA	NA	False	NA	NA	NA	10231588	10231412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_-_10231400_10231600
m54284U_201203_174622/45615211/ccs	chr2	+	4726	8	NIC	ENSMUSG00000027582.17	novel	3666	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_6	30.513295864095	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGCTCTTGGTTGCTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	181007197	181025421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167_181024497_181024591_181024954_181025050
m54284U_201203_174622/45615445/ccs	chr14	+	4124	8	NIC	ENSMUSG00000036461.17	novel	4235	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	10.5133539959852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTGTTTGTAATTCT	NA	False	NA	NA	False	ATTAAA	-39	NA	79718633	79819934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_79719078_79773562_79773863_79798186_79798368_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
m54284U_201203_174622/45681280/ccs	chr7	+	1044	10	NIC	ENSMUSG00000003423.16	novel	1077	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	115.92792567202	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCCAGACAATGATGCATG	NA	False	NA	21	True	AATAAA	-21	NA	44803772	44809489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_44803845_44805716_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
m54284U_201203_174622/45744379/ccs	chr1	-	5264	14	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	0	443	combination_of_known_junctions	FALSE	canonical	1	7	junction_12	45.2966553097303	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30913002	30842183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30902067_30902337_30912658
m54284U_201203_174622/45746340/ccs	chr18	+	8069	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_43	31.5891370608143	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	134	False	NA	10	True	AATAAA	-19	NA	67933203	68018241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998852_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
m54284U_201203_174622/45812484/ccs	chr11	+	6219	32	NIC	ENSMUSG00000020721.17	novel	6218	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_1	32.985507491541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	False	NA	9	True	AATAAA	-17	NA	107438781	107577769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
m54284U_201203_174622/45940922/ccs	chr17	+	1659	12	NIC	ENSMUSG00000055817.19	novel	882	8	NA	NA	145	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	326.775531418563	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTGTTTTTTTTTTT	NA	False	NA	12	True	AATAAA	-17	NA	84036737	84100304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_84036957_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
m54284U_201203_174622/45942589/ccs	chr17	-	176	1	Intergenic	novelGene_8495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAACAGTTC	NA	False	NA	NA	False	NA	NA	NA	29784409	29784233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29784200_29784400
m54284U_201203_174622/45942677/ccs	chr1	+	1650	9	NIC	ENSMUSG00000047361.17	novel	933	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	3.23795846174715	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGTTTTCTTTAGGA	NA	False	NA	NA	False	AATAAA	-18	NA	59658572	59675576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_59658605_59664245_59664337_59666615_59666767_59667328_59667444_59669153_59669486_59671372_59671576_59672305_59672479_59673152_59673373_59675243
m54284U_201203_174622/46007294/ccs	chr8	-	908	6	NIC	ENSMUSG00000006589.9	novel	660	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	634.519030447472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCTTCTCCTCAGTTT	NA	False	NA	-7	True	AATAAA	-15	NA	123303575	123301375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_123301767_123301875_123301955_123302140_123302275_123302857_123302971_123303253_123303361_123303491
m54284U_201203_174622/46007396/ccs	chr16	+	1943	12	NIC	ENSMUSG00000005262.14	novel	1996	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	122.971810248132	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGATATGGTATGTTGT	NA	False	NA	10	True	AATAAA	-20	NA	18631070	18654011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_18631168_18633579_18633687_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
m54284U_201203_174622/46008770/ccs	chr5	+	5293	20	NIC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_9	21.9758114318594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1443	False	NA	16	True	AATACA	-15	NA	34527276	34643800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_34527772_34567924_34568168_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
m54284U_201203_174622/460163/ccs	chr17	+	5029	6	NNC	ENSMUSG00000034998.19	novel	5085	6	NA	NA	241	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	100.061181284252	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTGTTATTTGTGAG	NA	False	NA	15	True	AATAAA	-19	NA	88748443	88797961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_88748562_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
m54284U_201203_174622/460640/ccs	chr11	-	3345	5	NIC	ENSMUSG00000020390.13	novel	1792	6	NA	NA	97	407	intron_retention	FALSE	canonical	3	629	junction_3	65.1704495918204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACTTTGTCACTTATT	NA	False	NA	-3	True	AATACA	-13	NA	51891209	51877086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51888726_51891119
m54284U_201203_174622/46072732/ccs	chr10	-	3482	11	NIC	ENSMUSG00000062075.14	novel	3370	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_7	25.7194478945408	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGAGTAGATCTTCA	3111	False	NA	-1	True	AATAAA	-17	NA	80754079	80737197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
m54284U_201203_174622/46138579/ccs	chr5	-	5156	17	NIC	ENSMUSG00000029657.16	novel	3802	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	1194	junction_12	109.510202150302	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTTGGCTTTGTCTCC	NA	False	NA	-6	True	AATAAA	-24	NA	149559803	149540309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149557353_149559434
m54284U_201203_174622/46139439/ccs	chr6	+	1063	7	NIC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	0	-251	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	434.945207277116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTAAGAAGTTAGAGCA	1362	False	NA	32	True	ATTAAA	-19	NA	124807197	124810244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124807237_124807326_124807381_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
m54284U_201203_174622/46139868/ccs	chrX	-	4461	9	NIC	ENSMUSG00000046873.19	novel	4797	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_4	74.2040051142794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTCTGTATCATATTT	NA	False	NA	-5	True	AATAAA	-35	NA	156381675	156330819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
m54284U_201203_174622/46203964/ccs	chr19	+	4555	25	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	2606	junction_4	259.361150902024	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	630	False	NA	56	True	AATAAA	-16	NA	10582950	10607183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10605229_10605788_10605913_10606442
m54284U_201203_174622/46205189/ccs	chr4	+	207	1	Intergenic	novelGene_2081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAACAATACATAGCCTT	NA	False	NA	NA	False	ATTAAA	-12	NA	122952249	122952456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_122952200_122952500
m54284U_201203_174622/46269959/ccs	chr12	+	3353	9	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	109	junction_2	35.2790217409724	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807618	117842441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117839460_117840640_117840778_117841201
m54284U_201203_174622/46334244/ccs	chr4	+	4380	24	NNC	ENSMUSG00000045751.17	novel	4478	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_8	91.1041697961916	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTCTGTGAATATTTA	-2	True	NA	NA	False	ATTAAA	-23	NA	24496464	24602950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517146_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580050_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
m54284U_201203_174622/46334777/ccs	chr2	-	251	3	NNC	ENSMUSG00000078869.3	novel	1050	3	NA	NA	-5298	-846	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	218	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCATGACTGTAACCA	NA	False	NA	-41	True	NA	NA	NA	176964127	176957292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_176957402_176958542_176958604_176964046
m54284U_201203_174622/46335571/ccs	chr2	+	3713	8	NIC	ENSMUSG00000027651.17	novel	4399	8	NA	NA	0	-887	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	76.6055361136864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGATGTTTCTTCTCC	NA	False	NA	10	True	AATAAA	-21	NA	157870416	157919240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157912480_157912577_157916849
m54284U_201203_174622/46401026/ccs	chr7	-	180	1	Intergenic	novelGene_3613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	3312927	3312747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3312700_3312900
m54284U_201203_174622/46401960/ccs	chr19	+	190	1	Intergenic	novelGene_9068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAATGGTCCCCGAG	7981	False	NA	NA	False	NA	NA	NA	3795351	3795541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_3795400_3795500
m54284U_201203_174622/46532567/ccs	chr8	-	4903	20	NIC	ENSMUSG00000000759.15	novel	3797	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	142	junction_11	13.0039414438389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCATGTGGTTTCTG	NA	False	NA	-1	True	ATTAAA	-16	NA	12722123	12664278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
m54284U_201203_174622/4654711/ccs	chr12	+	3793	7	NIC	ENSMUSG00000020630.10	novel	1455	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	224	junction_2	15.4775823549919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACATCTAGTTTGAGTTA	NA	False	NA	13	True	AATAAA	-21	NA	28699622	28709588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_28699816_28702023_28702140_28703061_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
m54284U_201203_174622/4655000/ccs	chr11	-	2074	6	NIC	ENSMUSG00000017386.11	novel	2078	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	463	junction_3	28.6258624324229	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCTGTCTCCTCCCA	NA	False	NA	1	True	NA	NA	NA	78056342	78050225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052449_78053207_78053260_78056123
m54284U_201203_174622/4655703/ccs	chr10	-	205	1	Intergenic	novelGene_5166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAAATGAAGCAGAA	NA	False	NA	NA	False	AAAACA	-6	NA	3417929	3417724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_3417700_3417900
m54284U_201203_174622/46596370/ccs	chr5	+	3630	14	NNC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	24.7453300836086	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTGATCAGCTAGCA	NA	False	NA	9	True	AATAAA	-15	NA	112490965	112526280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_112491030_112491607_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
m54284U_201203_174622/46596592/ccs	chr12	+	2743	20	NIC	ENSMUSG00000021144.15	novel	2789	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_13	152.530402037451	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9323	False	NA	24	True	ATTAAA	-41	NA	113061897	113100826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
m54284U_201203_174622/46598713/ccs	chr2	-	187	1	Intergenic	novelGene_1028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAAGTGAGCTAGAGGC	9945	False	NA	NA	False	NA	NA	NA	121303798	121303611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_121303600_121303800
m54284U_201203_174622/46661683/ccs	chr2	-	6163	16	NNC	ENSMUSG00000027177.15	novel	7454	16	NA	NA	-139	-1427	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_7	9.18114008897225	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGAGTGTAAACCTCC	NA	False	NA	NA	False	AATAAA	-10	NA	104324930	104258252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265060_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
m54284U_201203_174622/46664465/ccs	chr18	-	3792	15	NIC	ENSMUSG00000024533.18	novel	5405	17	NA	NA	-115	-1089	combination_of_known_splicesites	FALSE	canonical	1	3	junction_14	23.13227271187	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATGTTAGTAGTTCA	NA	False	NA	NA	False	AATAAA	-20	NA	67743975	67622932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67743474
m54284U_201203_174622/46727927/ccs	chr8	-	1094	6	NIC	ENSMUSG00000031821.12	novel	473	5	NA	NA	0	280	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	542.881423517143	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTAGAACGGGTTTAATT	NA	False	NA	91	True	AATACA	-18	NA	121315773	121308002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_121308551_121308820_121308948_121312831_121312932_121314194_121314290_121315463_121315579_121315664
m54284U_201203_174622/46728154/ccs	chr12	+	5055	28	NNC	ENSMUSG00000034601.18	novel	4507	28	NA	NA	330	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_24	29.4410666592715	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTGTTTCTTAGAAG	NA	False	NA	22	True	AATAAA	-20	NA	71183951	71290077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236315_71237668_71237740_71240040_71240164_71241065_71241241_71289717
m54284U_201203_174622/46792816/ccs	chr11	-	1842	14	NIC	ENSMUSG00000025155.16	novel	1863	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	287	junction_5	178.060258399514	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAGAGATCTCTAGTGA	NA	False	NA	-16	True	AATAAA	-17	NA	120687229	120680026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
m54284U_201203_174622/46794594/ccs	chr7	+	2891	14	NIC	ENSMUSG00000004056.16	novel	1392	12	NA	NA	324	0	intron_retention	FALSE	canonical	1	4	junction_1	142.279581423129	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGTCCACATTTCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	27292206	27338878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_27292255_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
m54284U_201203_174622/46794685/ccs	chr5	+	3927	21	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_7	227.455841868262	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186421	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/46860464/ccs	chr10	-	3059	5	NIC	ENSMUSG00000000731.16	novel	1749	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	13	junction_4	2.58602010819715	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGTACACCTGGTGGA	NA	False	NA	-9	True	ATTAAA	-16	NA	77874094	77865864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_77866159_77867654_77867724_77870214_77870324_77870419_77872619_77873706
m54284U_201203_174622/46925758/ccs	chrX	+	3663	3	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	91	junction_2	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643481	134648071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_134643728_134644311_134645325_134645667
m54284U_201203_174622/47057185/ccs	chrX	+	4159	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_17	303.21508223483	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102894_143103058_143105007_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/47123036/ccs	chr18	+	211	1	Intergenic	novelGene_8834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGCAGGCATGGAAAGAG	NA	False	NA	NA	False	NA	NA	NA	21047062	21047273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_21047100_21047300
m54284U_201203_174622/4718984/ccs	chr3	+	3625	1	ISM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	9127	0	8107	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGGAAACCGTGGTGT	NA	False	NA	9	True	NA	NA	NA	102912150	102915775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_102912200_102915800
m54284U_201203_174622/4719212/ccs	chr5	+	2807	14	NIC	ENSMUSG00000042328.14	novel	3345	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	24.5195248851138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGTGATCAGCTAGCA	NA	False	NA	9	True	AATAAA	-15	NA	112490948	112526280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_112490989_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
m54284U_201203_174622/4719271/ccs	chr14	+	1465	15	NIC	ENSMUSG00000021832.9	novel	2234	14	NA	NA	0	-885	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	607.179074550028	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAATAGTATGTAATTC	NA	False	NA	19	True	AATAAA	-12	NA	45567284	45586277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_45567390_45567822_45567979_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
m54284U_201203_174622/4720049/ccs	chr11	-	3274	13	NIC	ENSMUSG00000047804.16	novel	3874	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	44.4669040473424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCAACTTCCTGCTTT	NA	False	NA	NA	False	NA	NA	NA	61821052	61762497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
m54284U_201203_174622/4720788/ccs	chr11	+	2505	7	NIC	ENSMUSG00000018882.13	novel	2431	8	NA	NA	-51	-809	intron_retention	FALSE	canonical	3	2561	junction_3	180.426962754708	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTCTGTACATTTT	NA	False	NA	NA	False	AATAAA	-24	NA	97206682	97219937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97217758_97218911_97219086_97219307
m54284U_201203_174622/4720915/ccs	chr9	+	2324	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	3928	junction_3	6139.74894454495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715660_40715758_40715992_40716227
m54284U_201203_174622/47251517/ccs	chr17	-	3092	15	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	503.806632001783	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	5740	False	NA	-8	True	AATAAA	-13	NA	33904393	33865212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_33865634_33867786_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
m54284U_201203_174622/47252730/ccs	chr12	+	1267	7	NNC	ENSMUSG00000021286.9	novel	1308	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_5	264.970700686363	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCAGGCTCTGGCCTCA	NA	False	NA	16	True	ATTAAA	-17	NA	111780641	111794820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793979_111794120_111794251
m54284U_201203_174622/47253190/ccs	chr7	-	1999	5	NIC	ENSMUSG00000030652.12	novel	914	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	921	junction_3	45.3376223461266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTGGTTTTCTTGTGCT	6680	False	NA	-2	True	AATAAA	-16	NA	118132524	118124284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118128961_118132401
m54284U_201203_174622/47383293/ccs	chr14	+	3547	8	NIC	ENSMUSG00000022032.15	novel	3179	8	NA	NA	67	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	14.8172541453592	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTGATAAGTGGTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	65913992	66002275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_65914208_65927216_65927346_65967969_65968645_65975872_65975954_65977738_65977838_65979580_65979629_65997033_65997229_66000170
m54284U_201203_174622/47383794/ccs	chr14	+	3860	23	NIC	ENSMUSG00000021913.9	novel	3723	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	463	junction_11	41.2351651260815	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGCCTCCTTTCCTA	NA	False	NA	12	True	AATAAA	-18	NA	32043975	32070108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_32044074_32045835_32045905_32047750_32047956_32048935_32049107_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068811_32069462
m54284U_201203_174622/47384418/ccs	chr15	+	4031	16	ISM	ENSMUSG00000022240.11	ENSMUST00000226119.2	4111	22	473700	-587	219	219	3prime_fragment	FALSE	canonical	3	23	junction_10	10.715720538847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCCTTGCTAAGAATGT	17	True	NA	NA	False	AATAAA	-18	NA	30646896	31028774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_+_30647471_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
m54284U_201203_174622/47448974/ccs	chr7	+	168	1	Intergenic	novelGene_4172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGTGGCTCTGTGCC	NA	False	NA	NA	False	NA	NA	NA	141122934	141123102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_141122900_141123100
m54284U_201203_174622/47449070/ccs	chr6	+	3114	23	NIC	ENSMUSG00000023403.15	novel	3237	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	36	junction_21	64.6919113060493	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATTCATATTCTTT	173	False	NA	NA	False	AATAAA	-22	NA	49372537	49446435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_49372619_49374994_49375042_49375129_49375183_49381699_49381799_49383683_49383759_49385986_49386146_49394122_49394482_49396088_49396264_49398617_49398734_49400309_49400470_49402629_49402753_49414283_49414467_49414906_49415024_49415382_49415503_49416032_49416165_49417790_49417893_49419164_49419246_49422101_49422228_49423027_49423154_49423324_49423412_49424177_49424328_49442402_49442472_49446061
m54284U_201203_174622/47449468/ccs	chr18	+	2499	15	NNC	ENSMUSG00000024560.8	novel	2620	15	NA	NA	91	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_13	61.7303219905844	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTCTCTCAATAGTCTC	NA	False	NA	17	True	AATAAA	-20	NA	74349292	74354567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353644_74353898_74354052_74354129
m54284U_201203_174622/47513950/ccs	chr4	-	234	1	Intergenic	novelGene_2354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAGATTAATGAAAATACA	NA	False	NA	NA	False	NA	NA	NA	147300840	147300606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_147300600_147300800
m54284U_201203_174622/47515348/ccs	chr17	+	2685	6	NNC	ENSMUSG00000067931.7	novel	2652	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	38.4010416525385	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATGGAAAGATTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	21787269	21808961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_21787508_21789277_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
m54284U_201203_174622/47516117/ccs	chr2	+	3326	11	ISM	ENSMUSG00000033705.18	ENSMUST00000154193.8	5377	13	448	15813	448	0	5prime_fragment	FALSE	canonical	1	3	junction_3	3.71618083521241	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	120535520	120546563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_120536062_120536149_120536348_120536745_120536930_120537298_120537437_120543105_120543224_120543330_120543453_120543655_120543721_120543845_120544049_120544227_120544308_120544485_120544645_120545045
m54284U_201203_174622/47516162/ccs	chr11	+	3338	12	NIC	ENSMUSG00000018809.3	novel	3517	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	20.2051462227893	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTATTGGTTTCCTA	NA	False	NA	35	True	AATAAA	-37	NA	75239320	75296531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75280967_75281083_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
m54284U_201203_174622/47516202/ccs	chr17	-	1207	7	NNC	ENSMUSG00000039615.10	novel	1320	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_6	564.894016608425	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGCATGTGCTGGTGCA	6753	False	NA	-19	True	AATAAA	-15	NA	26051927	26049609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051162_26051665
m54284U_201203_174622/47582045/ccs	chr8	-	1987	8	NIC	ENSMUSG00000031816.16	novel	1520	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_5	29.1078220779647	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGCAGGACTCAGCC	NA	False	NA	NA	False	ATTAAA	-23	NA	121835082	121824675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831298_121832456_121832571_121833608_121833713_121835026
m54284U_201203_174622/47645846/ccs	chr6	-	5075	26	NIC	ENSMUSG00000053470.14	novel	4816	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	176	junction_17	112.464038696821	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71609889	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
m54284U_201203_174622/47712580/ccs	chr2	+	5913	34	NNC	ENSMUSG00000057110.16	novel	5970	34	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_8	25.7362121742864	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCAGGTTACCTTTATTC	NA	False	NA	22	True	AATAAA	-25	NA	35022245	35068834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
m54284U_201203_174622/47778284/ccs	chr4	-	3702	19	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_13	417.266253779538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201203_174622/47841983/ccs	chr5	-	4247	29	NNC	ENSMUSG00000062234.15	novel	4453	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	70.889420571617	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTCTCTGGCTTGTA	NA	False	NA	-34	True	ATTAAA	-17	NA	108777621	108717285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108730714_108730929_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
m54284U_201203_174622/47842988/ccs	chr2	-	1884	9	NIC	ENSMUSG00000026869.13	novel	4397	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	104	junction_8	158.265945089271	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGCGTTGGTATTCCG	NA	False	NA	-14	True	AATAAA	-14	NA	34760974	34742113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34760761
m54284U_201203_174622/47843104/ccs	chr9	+	1353	2	Genic_Genomic	ENSMUSG00000062309.9	novel	1423	1	NA	NA	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCAGTTTTGTTC	NA	False	NA	12	True	AATAAA	-17	NA	57411308	57412731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_57411538_57411607
m54284U_201203_174622/47843203/ccs	chr15	-	4372	13	NIC	ENSMUSG00000037458.16	novel	4217	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	195.929036898567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTACTTTGATGGCTT	NA	False	NA	-8	True	GATAAA	-16	NA	38519510	38488481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497795_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
m54284U_201203_174622/4785064/ccs	chr11	+	2520	12	NIC	ENSMUSG00000017499.16	novel	4802	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	177.064586432734	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGGGCTGCATTTG	0	True	NA	8	True	AATATA	-17	NA	98798674	98812719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802216_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
m54284U_201203_174622/4785788/ccs	chr5	-	4918	15	NNC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-31026	-420	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	19.9700030147259	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCCATTTTTGTCTCA	NA	False	NA	-6	True	ATTAAA	-16	NA	3783158	3740419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3782853
m54284U_201203_174622/4786143/ccs	chr15	-	5554	37	NIC	ENSMUSG00000022568.18	novel	5599	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_9	77.9983529028374	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTCCTTTTGTCCTGCC	NA	False	NA	-1	True	AATAAA	-21	NA	75941633	75919006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
m54284U_201203_174622/47906922/ccs	chr17	+	5649	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	95.0154145077673	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004407	29057518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29004515_29016706_29016757_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
m54284U_201203_174622/47907991/ccs	chr1	+	6813	37	NIC	ENSMUSG00000026490.19	novel	9161	37	NA	NA	-435	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	17.1587540196301	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTGTTTCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-21	NA	179787601	179990153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_179788853_179826926_179827019_179852209_179852368_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
m54284U_201203_174622/47909321/ccs	chr5	+	2887	12	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_6	26.9241358433115	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168039	146239684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
m54284U_201203_174622/47909345/ccs	chr4	+	3734	12	NNC	ENSMUSG00000028948.17	novel	3722	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_4	187.855052264125	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGAATACAGCTCTTC	7354	False	NA	NA	False	NA	NA	NA	152123792	152144499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130401_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
m54284U_201203_174622/47973054/ccs	chrX	+	3161	6	NIC	ENSMUSG00000067194.7	novel	5172	7	NA	NA	0	-1927	combination_of_known_splicesites	FALSE	canonical	3	222	junction_1	909.772147298432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATAATGGTTTTTTGTT	5347	False	NA	NA	False	AATAAA	-14	NA	158155173	158170997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_158155412_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
m54284U_201203_174622/47973116/ccs	chr11	-	2965	7	NIC	ENSMUSG00000001034.18	novel	3019	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_4	77.5234731477434	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385014	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383675_61383896_61384472_61384781_61384905
m54284U_201203_174622/47974323/ccs	chr11	-	1130	6	NNC	ENSMUSG00000025134.3	novel	3527	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1617.40050698644	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCTGTCTGGTCCATC	4306	False	NA	-7	True	AATAAA	-19	NA	120489191	120485334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120485694_120485805_120485972_120486080_120486145_120486745_120486894_120488460_120488593_120488930
m54284U_201203_174622/48038085/ccs	chr3	-	3267	12	NIC	ENSMUSG00000069094.13	novel	6298	13	NA	NA	0	1330	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59.228790184984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTCTTTGCTCATTGGTT	NA	False	NA	-20	True	AATAAA	-2	NA	19365486	19280218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19314395_19314457_19365027
m54284U_201203_174622/48104276/ccs	chr5	+	1324	6	NNC	ENSMUSG00000029602.12	novel	486	2	NA	NA	-3799	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.6282642044691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTGACGTGTTAAAATCG	180	False	NA	11	True	TATAAA	-21	NA	120812858	120817662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_120813041_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816759_120816986
m54284U_201203_174622/48105763/ccs	chr9	-	3307	6	NNC	ENSMUSG00000004661.16	novel	3785	8	NA	NA	-4210	0	intron_retention	FALSE	canonical	3	7	junction_5	89.1748843565272	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTATGGGATCCTTTCA	NA	False	NA	-3	True	AATAAA	-20	NA	57707714	57697635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_57699969_57702218_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57707586
m54284U_201203_174622/48170056/ccs	chr2	+	7750	23	NIC	ENSMUSG00000061186.16	novel	1763	6	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	13.1658210140958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	2763	False	NA	3	True	AATAAA	-16	NA	10375320	10600064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_10375364_10384995_10385047_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
m54284U_201203_174622/48170843/ccs	chr9	-	1974	2	NIC	ENSMUSG00000066892.15	novel	4182	2	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTGCACTTATTTAAC	NA	False	NA	-1	True	ATTAAA	-21	NA	20556051	20549081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_20550495_20555490
m54284U_201203_174622/48171547/ccs	chr3	-	168	1	Intergenic	novelGene_1707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAGAAAAAGAGGG	NA	False	NA	NA	False	NA	NA	NA	138572016	138571848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_138571800_138572000
m54284U_201203_174622/48171799/ccs	chr4	+	152	1	Intergenic	novelGene_1851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	7295	False	NA	NA	False	NA	NA	NA	46479867	46480019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_46479900_46480000
m54284U_201203_174622/48236122/ccs	chr9	+	5667	5	NIC	ENSMUSG00000025236.12	novel	5148	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	305	junction_4	143.186067758005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198865	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59221135_59222013
m54284U_201203_174622/48302926/ccs	chr5	+	5369	43	NIC	ENSMUSG00000037426.19	novel	7929	43	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	32.8223849973779	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2013	False	NA	7	True	AATAAA	-8	NA	33021064	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021166_33021923_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
m54284U_201203_174622/48368029/ccs	chr2	-	4065	19	NNC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_9	482.745376741644	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627994	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
m54284U_201203_174622/48368224/ccs	chr8	-	3537	18	NNC	ENSMUSG00000058355.9	novel	3793	18	NA	NA	0	-183	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_17	286.022514660531	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCTTACCGGTGTGTG	NA	False	NA	-10	True	AATAAA	-18	NA	80438299	80410273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435179_80438171
m54284U_201203_174622/48432435/ccs	chrX	+	4835	9	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	-52	0	intron_retention	FALSE	canonical	3	3075	junction_4	326.098120778087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473288	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100486632_100486900_100487968_100488293_100488941_100489724_100489835_100491199
m54284U_201203_174622/48433144/ccs	chr3	-	182	1	Intergenic	novelGene_1364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTAAAACATTTGGT	NA	False	NA	NA	False	NA	NA	NA	24217139	24216957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_24217000_24217100
m54284U_201203_174622/48433956/ccs	chr17	-	2669	12	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	119.555098124686	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5806	False	NA	-30	True	AATAAA	-18	NA	46593952	46568799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46582725_46582856_46593271_46593366_46593885
m54284U_201203_174622/4850378/ccs	chr6	+	2389	10	NNC	ENSMUSG00000030264.15	novel	692	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	227.705950734714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023418	113045234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_113023811_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
m54284U_201203_174622/4850561/ccs	chr6	+	2290	12	NIC	ENSMUSG00000058440.15	novel	3295	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	271	junction_11	90.9985923058862	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTGTCTCTGTGTAAT	13	True	NA	NA	False	NA	NA	NA	30048027	30140903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214
m54284U_201203_174622/4852386/ccs	chr8	-	3345	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_2	379.372884012507	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426975	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
m54284U_201203_174622/48562401/ccs	chr12	+	4592	12	NIC	ENSMUSG00000037486.19	novel	4462	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	16.9910039396156	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGAGACATTAATCAGGA	NA	False	NA	14	True	AATAAA	-13	NA	3476911	3552466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_3477213_3492473_3492557_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3526025_3526170_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
m54284U_201203_174622/48564423/ccs	chr14	-	2216	6	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	0	1103	intron_retention	FALSE	canonical	3	280	junction_3	36.1386219991853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTAGGTCATTCCTCC	NA	False	NA	-27	True	AATAAA	-13	NA	55919277	55916560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55916867_55916970_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
m54284U_201203_174622/48628637/ccs	chr2	-	1837	4	NNC	ENSMUSG00000032715.10	novel	2026	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	437.996448488899	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTTGGTGACTTTCTCT	NA	False	NA	-4	True	AATAAA	-29	NA	152185952	152179341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_152180608_152181634_152181928_152185145_152185248_152185776
m54284U_201203_174622/48629042/ccs	chr13	+	2855	23	NNC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	170.650075731326	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_59733605_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201203_174622/48629434/ccs	chr16	-	4021	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_4	248.941642474747	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
m54284U_201203_174622/48694124/ccs	chr10	+	169	1	Intergenic	novelGene_5186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATACATTCTATCTTTAT	NA	False	NA	NA	False	NA	NA	NA	7559418	7559587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_7559400_7559600
m54284U_201203_174622/48759854/ccs	chr11	+	3716	20	NIC	ENSMUSG00000020456.18	novel	4127	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	157.66848702437	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGCTGTCGTGTGT	NA	False	NA	14	True	CATAAA	-18	NA	6241632	6306642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_6241694_6246951_6247200_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
m54284U_201203_174622/48761504/ccs	chr4	+	2775	9	NNC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	173.501035659733	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600927	131629017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_131601182_131611586_131611794_131612666_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
m54284U_201203_174622/48825106/ccs	chr3	+	1416	3	NNC	ENSMUSG00000042312.11	novel	715	4	NA	NA	-522	0	intron_retention	FALSE	canonical	3	26	junction_1	185	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTATTTATTTATTTA	NA	False	NA	15	True	AATAAA	-20	NA	90421219	90431888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_90422327_90423269_90423350_90431659
m54284U_201203_174622/48826214/ccs	chr9	-	210	1	Intergenic	novelGene_4682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	438	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCGTTGTTATTTATAC	3860	False	NA	NA	False	NA	NA	NA	26876713	26876503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_26876500_26876700
m54284U_201203_174622/48891141/ccs	chr3	+	1656	13	NIC	ENSMUSG00000027671.15	novel	2010	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_11	397.893227930978	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGCTGGATTTGTCTGTG	NA	False	NA	23	True	AATAAA	-20	NA	32762913	32781122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32779395_32779483_32780670
m54284U_201203_174622/48891770/ccs	chr16	-	4020	20	NIC	ENSMUSG00000022789.16	novel	3966	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_17	412.408022147123	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATTCTTTCTGATGTGC	NA	False	NA	-10	True	AATAAA	-26	NA	16176823	16130096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16160560_16160600_16163861_16164010_16176627
m54284U_201203_174622/49021231/ccs	chr2	-	184	1	Intergenic	novelGene_1103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCTGCCAAAATAGTAAA	NA	False	NA	NA	False	NA	NA	NA	145737938	145737754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_145737800_145737900
m54284U_201203_174622/49023325/ccs	chr10	+	5158	15	NIC	ENSMUSG00000020024.8	novel	3639	16	NA	NA	0	147	intron_retention	FALSE	canonical	0	0	junction_12	59.0201020753064	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTTTAATTTTCCTG	9504	False	NA	10	True	AATAAA	-19	NA	94524515	94626202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
m54284U_201203_174622/49023502/ccs	chr3	+	2076	15	NNC	ENSMUSG00000028060.15	novel	2981	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	101.138140527636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCATTTCTCTTTTT	-10	True	NA	13	True	AATAAA	-14	NA	88593120	88620161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936_88619041_88619864
m54284U_201203_174622/49089180/ccs	chr15	+	4327	26	NIC	ENSMUSG00000036561.10	novel	3378	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_17	6.88697321034429	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGTGTCTTATTGTT	6663	False	NA	79	True	AATAAA	-15	NA	89095755	89171213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
m54284U_201203_174622/49153463/ccs	chr16	-	4255	14	NIC	ENSMUSG00000022718.13	novel	4320	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_13	51.7107338953916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGGTTTCTTTCTTCTG	NA	False	NA	0	True	CATAAA	-17	NA	18107110	18071811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18107031
m54284U_201203_174622/49153529/ccs	chr5	-	5602	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	1370	combination_of_known_junctions	FALSE	canonical	3	243	junction_29	68.980423954111	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563673	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124552461_124552591_124563509
m54284U_201203_174622/4915532/ccs	chr12	+	4580	4	NIC	ENSMUSG00000043061.11	novel	2971	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	167	junction_1	10.3387082795139	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACAGTGTGCTTTCGT	NA	False	NA	NA	False	AATAAA	-12	NA	30634424	30641214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_30634562_30635468_30637254_30638472_30638567_30638650
m54284U_201203_174622/49219094/ccs	chr13	-	2128	16	NNC	ENSMUSG00000021546.19	novel	2704	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_15	1957.93901391801	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5164	False	NA	-5	True	AATAAA	-14	NA	58549917	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549704
m54284U_201203_174622/49284266/ccs	chr18	+	3518	14	NIC	ENSMUSG00000024283.16	novel	3070	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	172.08292345372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	2	True	NA	NA	False	AATAAA	-22	NA	7868844	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
m54284U_201203_174622/49349616/ccs	chr8	+	1935	19	NIC	ENSMUSG00000004626.15	novel	2908	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	83.3438697042797	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGCTCACCTCATTTTC	4585	False	NA	16	True	AATAAA	-22	NA	3681152	3692795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_3681279_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
m54284U_201203_174622/49350176/ccs	chrX	-	4089	11	NIC	ENSMUSG00000057421.13	novel	2581	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	852	junction_3	60.377230807648	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94991462_94993942_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
m54284U_201203_174622/49415764/ccs	chr3	-	6357	1	NIC	ENSMUSG00000001017.16	novel	3118	4	NA	NA	3710	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90412619	90406262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_90406300_90412600
m54284U_201203_174622/49415886/ccs	chr15	-	1804	11	NIC	ENSMUSG00000022234.16	novel	1853	11	NA	NA	0	-83	combination_of_known_junctions	FALSE	canonical	3	46	junction_10	1800.94970779309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCGTCTGCAGTTACTG	114	False	NA	-30	True	AATAAA	-45	NA	31601685	31591028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601447
m54284U_201203_174622/49416916/ccs	chr2	-	4483	27	NNC	ENSMUSG00000039834.18	novel	4587	28	NA	NA	185	0	intron_retention	FALSE	canonical	3	15	junction_26	24.9977809666066	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTTGTATATGTGCTA	NA	False	NA	0	True	AATAAA	-25	NA	164753492	164733801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749879_164750074_164750153_164751125_164751364_164752541_164752796_164753436
m54284U_201203_174622/49481859/ccs	chr4	+	2648	8	NIC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_3	169.115707280488	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600927	131629017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_131601182_131611586_131611794_131612619_131612804_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
m54284U_201203_174622/49482446/ccs	chr5	+	6840	63	NIC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	86.4327991685586	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887788	123959656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_123887888_123891885_123892061_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
m54284U_201203_174622/49611510/ccs	chr11	-	2251	8	NIC	ENSMUSG00000039096.11	novel	4143	9	NA	NA	-184	-2028	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	14.1997413026162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTCTATGTATGTCTCA	3474	False	NA	NA	False	NA	NA	NA	94439802	94432651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94439003_94439190_94439296
m54284U_201203_174622/49613040/ccs	chrX	+	3843	27	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	256.744632296408	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143101018	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102998_143103058_143105007_143105147_143119328_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201203_174622/49676416/ccs	chr19	+	5066	23	NIC	ENSMUSG00000071650.7	novel	3788	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	992	junction_1	106.357585297962	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGTCTGAATTATACT	1904	False	NA	-56	True	GATAAA	-42	NA	8875475	8894036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
m54284U_201203_174622/49678612/ccs	chr11	-	3957	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	150.51776286796	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996863_119997259_119997437_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201203_174622/49809066/ccs	chr5	+	4052	24	NIC	ENSMUSG00000042605.17	novel	4472	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	71.1456611745913	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCAGTTAGTGTGTGTTT	893	False	NA	4	True	TTTAAA	-7	NA	121849922	121953013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935855_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121952400
m54284U_201203_174622/4983372/ccs	chr5	-	175	1	Intergenic	novelGene_2876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGGAGGGAGCAGAGAT	878	False	NA	NA	False	NA	NA	NA	123181839	123181664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123181700_123181800
m54284U_201203_174622/49872908/ccs	chr11	+	191	1	Intergenic	novelGene_6045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGTTATTCTTGCTGGC	NA	False	NA	NA	False	NA	NA	NA	77436675	77436866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77436700_77436900
m54284U_201203_174622/49938577/ccs	chr10	+	3378	14	NIC	ENSMUSG00000037608.17	novel	3231	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_10	323.935525764111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTGTAACTATCAACTT	2793	False	NA	12	True	AATAAA	-20	NA	20188217	20216012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20208141_20208304_20209137_20209319_20210244_20210392_20215454_20215668_20215797
m54284U_201203_174622/49940615/ccs	chr4	+	2863	8	NNC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_7	147.745644640389	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096259	154105970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104343_154104875
m54284U_201203_174622/49940911/ccs	chr15	-	192	1	Intergenic	novelGene_7957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTAAGCTAGAAATGACC	NA	False	NA	NA	False	NA	NA	NA	99001566	99001374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99001400_99001600
m54284U_201203_174622/50005932/ccs	chr2	+	2236	17	NNC	ENSMUSG00000027642.16	novel	2756	17	NA	NA	-115	0	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_16	550.328751179693	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGATGGAGCCTTGCA	NA	False	NA	17	True	AATAAA	-18	NA	157121230	157167976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167635
m54284U_201203_174622/50006452/ccs	chr2	-	3488	15	NNC	ENSMUSG00000045624.16	novel	3396	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_13	136.877291239792	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCGTTTGTATAGCATT	6977	False	NA	-12	True	AATAAA	-16	NA	140012484	139961802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140010983_140011076_140012396
m54284U_201203_174622/50006589/ccs	chr10	-	2319	13	NIC	ENSMUSG00000020166.16	novel	2800	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_9	176.289278523177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	False	NA	-6	True	AATAAA	-18	NA	116417405	116321070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116353221_116353289_116363731_116363855_116384937_116385011_116417357
m54284U_201203_174622/50072019/ccs	chr19	-	4245	23	NNC	ENSMUSG00000024991.9	novel	5125	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	379.321700512031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	8739	False	NA	-31	True	AATAAA	-17	NA	60779096	60749554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_60749728_60750622_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
m54284U_201203_174622/50136865/ccs	chr16	-	2147	7	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1593	junction_6	132.701942546278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746073	17743086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17745157_17745230_17745517_17745849
m54284U_201203_174622/50137931/ccs	chr17	+	865	7	NIC	ENSMUSG00000052712.18	novel	1073	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	129.043920171906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGGGTTGGTTGCTTAG	471	False	NA	15	True	AATAAA	-16	NA	29487921	29520499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29487977_29496830_29496922_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
m54284U_201203_174622/50200755/ccs	chr1	-	2115	12	NIC	ENSMUSG00000062729.13	novel	1821	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_9	30.0522960165736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTCTTTACTATTCAT	5189	False	NA	-15	True	AGTAAA	-16	NA	171108760	171104564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
m54284U_201203_174622/50201021/ccs	chr9	-	2140	12	NIC	ENSMUSG00000053289.9	novel	3128	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	94.7728035752909	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTGTTTTTATTGTAT	NA	False	NA	-3	True	AATAAA	-17	NA	53159353	53009934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_53010563_53028452_53028590_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
m54284U_201203_174622/50202868/ccs	chr16	-	2194	9	NIC	ENSMUSG00000022540.17	novel	1431	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	413	junction_5	44.6486281984117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTCTGTCTGTCTGTCT	NA	False	NA	-2	True	AATAAA	-18	NA	4831391	4826593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828807_4829475_4830160_4830290_4830374_4831166_4831239_4831326
m54284U_201203_174622/50203126/ccs	chr11	-	1402	8	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	763	junction_7	35.5883493891596	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	486	False	NA	-6	True	AATAAA	-16	NA	116029615	116022646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116026152_116029267_116029448_116029536
m54284U_201203_174622/50203345/ccs	chr5	-	4807	17	NIC	ENSMUSG00000057541.15	novel	3266	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_7	122.996046049253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGTAAAAATCTTGT	NA	False	NA	-9	True	AATAAA	-23	NA	23988709	23945646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23954996_23956398_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
m54284U_201203_174622/50267918/ccs	chr14	+	7965	31	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_10	45.4904629809614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8226	False	NA	14	True	AATAAA	-21	NA	30741105	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
m54284U_201203_174622/50268525/ccs	chr6	+	2381	12	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_5	152.310307438683	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACAATGCCTTGTGGGG	NA	False	NA	28	True	AATAAA	-22	NA	85408970	85423417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
m54284U_201203_174622/50332731/ccs	chr5	-	4311	26	NNC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	53	junction_25	224.994378596444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563761
m54284U_201203_174622/5046648/ccs	chr8	+	2641	19	NNC	ENSMUSG00000001472.18	novel	2582	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_18	161.529571500502	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATGGTGATATGGCC	NA	False	NA	12	True	AAGAAA	-17	NA	124100562	124130549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129543_124129600_124129885
m54284U_201203_174622/5047119/ccs	chr6	-	7032	23	NIC	ENSMUSG00000030302.18	novel	4586	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	7.70799734953872	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCAATGGTTATGTTTTC	NA	False	NA	-1	True	AATAAA	-29	NA	113868331	113722630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_113725810_113733792_113733976_113735879_113735988_113736083_113736296_113737602_113737817_113739725_113739918_113740498_113740606_113742681_113742770_113742948_113743129_113750221_113750457_113751165_113751408_113766713_113766957_113770626_113770842_113773199_113773359_113774070_113774113_113779446_113779507_113780707_113780741_113782421_113782548_113789745_113789872_113790747_113791006_113794108_113794307_113819092_113819607_113868213
m54284U_201203_174622/5048714/ccs	chr19	-	3204	17	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	299.454921482349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576867	40538700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_40539774_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
m54284U_201203_174622/50529317/ccs	chr3	+	3943	12	NNC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	0	-3966	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	17.0565418486489	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011838	96064480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_96012132_96043784_96043936_96047727_96047917_96048932_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
m54284U_201203_174622/50530914/ccs	chr15	-	4923	1	Genic_Genomic	ENSMUSG00000075511.10	novel	NA	NA	NA	NA	6568	195	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAACTGTTGTGAAGTA	8953	False	NA	NA	False	AATAAA	-13	NA	83242775	83237852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr15_-_83237900_83242800
m54284U_201203_174622/50530963/ccs	chr9	+	7413	39	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	0	530	combination_of_known_junctions	FALSE	canonical	2	6	junction_29	15.1526169539792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGCCTGAATGTCCT	2333	False	NA	21	True	ATTAAA	-23	NA	74978469	75126765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
m54284U_201203_174622/50530984/ccs	chr17	+	4049	25	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	434	junction_1	110.861204202472	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201203_174622/50724940/ccs	chr4	+	4050	17	NIC	ENSMUSG00000028613.16	novel	4555	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	16.2922527601311	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATAGAATTTTCTTCA	NA	False	NA	9	True	AATAAA	-18	NA	107659457	107731096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107729469
m54284U_201203_174622/50726243/ccs	chr18	-	3778	31	NIC	ENSMUSG00000024493.10	novel	3980	32	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	12	junction_29	467.541365965504	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCCATGTTATTTATT	NA	False	NA	-8	True	AATAAA	-18	NA	42395194	42335411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42390134_42390260_42395025
m54284U_201203_174622/50726942/ccs	chr7	+	6805	24	NNC	ENSMUSG00000052707.9	novel	8183	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_13	36.0297608553927	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	122723403	122793210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780610_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
m54284U_201203_174622/50727085/ccs	chr2	-	3824	11	NIC	ENSMUSG00000027104.19	novel	4003	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_5	101.64742987405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTGCTTGT	NA	False	NA	-10	True	AATAAA	-15	NA	73722972	73646863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73693512_73693583_73704013_73704090_73710628_73710726_73722818
m54284U_201203_174622/50856724/ccs	chr4	-	2868	13	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	283.147819168716	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	False	NA	-3	True	ATTAAA	-18	NA	48473459	48430857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436447_48436518_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
m54284U_201203_174622/50921834/ccs	chr10	-	2072	9	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_8	141.668406852057	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186278	81181881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81186024_81186240
m54284U_201203_174622/50923872/ccs	chr6	-	206	1	Intergenic	novelGene_3536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAACTAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	128775922	128775716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128775700_128775900
m54284U_201203_174622/50924355/ccs	chr1	+	174	1	Intergenic	novelGene_538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAAGTATGTTAA	NA	False	NA	NA	False	NA	NA	NA	184801732	184801906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_184801700_184801900
m54284U_201203_174622/50988760/ccs	chr11	-	3650	29	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	0	-1411	combination_of_known_junctions	FALSE	canonical	3	41	junction_15	43.2524624756104	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATGTTTCAAGTCTATC	NA	False	NA	-1	True	NA	NA	NA	33463746	33163205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33450679_33450771_33454681_33454829_33463601
m54284U_201203_174622/51053264/ccs	chr11	-	3567	4	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	47	junction_3	618.964906562202	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCCCCCCTCTCCCT	NA	False	NA	-6	True	AATAAA	-33	NA	96713551	96708239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_96711343_96712076_96712236_96712929_96713146_96713462
m54284U_201203_174622/51054347/ccs	chr4	+	862	4	NIC	ENSMUSG00000065990.13	novel	773	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	1100.13494121807	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTCTAGGCCGACCTAGA	NA	False	NA	27	True	AATAAA	-17	NA	155916125	155917518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155916193_155916349_155916528_155916808_155917255_155917347
m54284U_201203_174622/51055216/ccs	chr4	-	3106	15	NIC	ENSMUSG00000028677.20	novel	3029	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	471.87085313761	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTCTGTGTTTGAAG	NA	False	NA	NA	False	ATTAAA	-14	NA	117354249	117128660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353879
m54284U_201203_174622/5113286/ccs	chr7	+	2170	9	NNC	ENSMUSG00000059851.16	novel	2177	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_6	216.601448517779	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGTTTTTTTTTTTTTTT	624	False	NA	16	True	ATTAAA	-17	NA	4743154	4750513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748836_4748938_4749075_4749261_4749375
m54284U_201203_174622/5113831/ccs	chr10	-	176	1	Intergenic	novelGene_5183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAGTCACTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	7265151	7264975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_7265000_7265200
m54284U_201203_174622/51250225/ccs	chr13	+	1301	1	Intergenic	novelGene_7180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAAATATATGTGTCT	NA	False	NA	NA	False	AATAAA	-27	NA	66158559	66159860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_66158600_66159900
m54284U_201203_174622/51250478/ccs	chr19	+	5094	14	NNC	ENSMUSG00000055491.15	novel	5205	14	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	90	junction_2	145.8115424689	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTAAGTGGTATTTG	NA	False	NA	13	True	AATAAA	-15	NA	46045019	46061240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_46045183_46049841_46050016_46050579_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056456_46056528_46057477_46058208_46059715_46059851_46059963_46060025_46060140_46060263_46060621_46060774_46060987
m54284U_201203_174622/51250663/ccs	chr16	+	1851	1	FSM	ENSMUSG00000085783.4	ENSMUST00000122292.2	1414	1	-55	-382	-55	382	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTTAAGGACAGAGCC	NA	False	NA	NA	False	ATTAAA	-40	NA	62537344	62539195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_62537300_62539200
m54284U_201203_174622/51314941/ccs	chr16	+	3725	6	ISM	ENSMUSG00000005982.15	ENSMUST00000186375.8	2350	7	-35	0	-11	0	intron_retention	FALSE	canonical	1	49	junction_5	40.0149971885542	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCTAGTTATTGGC	NA	False	NA	39	True	AATAAA	-20	NA	3702511	3722634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646
m54284U_201203_174622/51315474/ccs	chr7	-	718	6	NIC	ENSMUSG00000025466.20	novel	685	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	128.971934931597	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTGTCTTGTGGTGAG	1946	False	NA	-4	True	NA	NA	NA	139681879	139679386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139681707
m54284U_201203_174622/51315485/ccs	chr15	-	144	1	Intergenic	novelGene_7909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAATTAAAAAATA	3203	False	NA	NA	False	NA	NA	NA	89426690	89426546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_89426500_89426700
m54284U_201203_174622/51380249/ccs	chr12	-	191	1	Intergenic	novelGene_6804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACAAAACAAAACT	9250	False	NA	NA	False	NA	NA	NA	84763839	84763648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_84763600_84763800
m54284U_201203_174622/51381759/ccs	chr11	+	3721	24	NIC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	29.4248586443195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGTTTTAAGTA	NA	False	NA	25	True	AATAAA	-33	NA	84771178	84801957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
m54284U_201203_174622/51448155/ccs	chr1	+	4746	26	NIC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	77.3029986481766	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201203_174622/51512502/ccs	chrX	+	2913	10	NIC	ENSMUSG00000000134.18	novel	2943	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	87.2919042249043	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	False	NA	24	True	AATAAA	-35	NA	7630197	7641440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7630238_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
m54284U_201203_174622/51513672/ccs	chr3	+	1824	10	NNC	ENSMUSG00000118504.2	novel	1545	10	NA	NA	-90	3	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	189.742580654897	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGGGCTGGCAGGATG	NA	False	NA	10	True	AATAAA	-19	NA	89960120	89973182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944_89969426_89970515_89970557_89971731_89971862_89972816
m54284U_201203_174622/51577051/ccs	chr4	+	5225	5	NNC	ENSMUSG00000028211.12	novel	5432	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	91.4836050885622	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGAGGATTCTTTTAT	11	True	NA	16	True	AATAAA	-17	NA	11156443	11174379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_11156548_11164310_11164570_11165293_11165448_11167896_11167935_11169709
m54284U_201203_174622/51577144/ccs	chr17	-	5556	7	NIC	ENSMUSG00000044857.9	novel	2627	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	478	junction_6	53.6151408963301	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTTATTTGTGGTGC	7993	False	NA	-1	True	AATAAA	-19	NA	27423443	27408573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27415187_27418336_27420652_27422632
m54284U_201203_174622/51577606/ccs	chr8	+	4991	17	NIC	ENSMUSG00000017478.16	novel	3705	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_3	40.5275754887953	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGTCCTGGTAATGT	939	False	NA	15	True	AATAAA	-16	NA	123103381	123144099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
m54284U_201203_174622/51708104/ccs	chr2	+	3401	20	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_13	206.433935023014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	493	False	NA	36	True	AATAAA	-37	NA	31462662	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502114_31502248_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
m54284U_201203_174622/51708886/ccs	chr15	-	2878	1	Antisense	novelGene_ENSMUSG00000033065.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAGATAATCAAGAATC	NA	False	NA	NA	False	NA	NA	NA	98017366	98014488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_98014500_98017400
m54284U_201203_174622/51774420/ccs	chr16	+	1597	9	NIC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	87	junction_5	232.101136360855	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGGTTGCCCCTTCA	7070	False	NA	-15	True	NA	NA	NA	38379059	38411708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
m54284U_201203_174622/51774425/ccs	chr14	+	7256	23	NIC	ENSMUSG00000040651.10	novel	7590	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	82	junction_22	59.3898035047312	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCGGGACTTTGATTC	8928	False	NA	16	True	AATAAA	-20	NA	27150790	27205512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186371_27188123_27188269_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
m54284U_201203_174622/51774916/ccs	chr17	-	3694	5	ISM	ENSMUSG00000034647.16	ENSMUST00000038116.13	10821	13	93720	1803	-399	512	3prime_fragment	FALSE	canonical	3	24	junction_3	5.8949130612758	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACGTAAGAGTGAAAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	66290348	66274495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830
m54284U_201203_174622/51775289/ccs	chrX	+	5920	7	NNC	ENSMUSG00000031365.14	novel	6376	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	13.6829171678492	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTTTCTTGACTCATT	NA	False	NA	12	True	NA	NA	NA	72386226	72402686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395530_72396441_72396544_72396826_72396928_72397383
m54284U_201203_174622/5178041/ccs	chr2	-	9036	21	NIC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_20	290.673059467161	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9785	False	NA	-6	True	AATAAA	-21	NA	120394324	120337300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120394167
m54284U_201203_174622/51840011/ccs	chr6	-	3642	7	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	761	junction_3	43.9305006674052	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416541	72409781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414432_72416328
m54284U_201203_174622/51840968/ccs	chr4	+	5677	8	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	85	junction_1	51.0613876243336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8271	False	NA	22	True	NA	NA	NA	156194454	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
m54284U_201203_174622/51841699/ccs	chr15	+	1805	4	NIC	ENSMUSG00000022330.6	novel	1724	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	14.8548533034381	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTCTTGAGATTCATC	117	False	NA	12	True	AATAAA	-15	NA	35296243	35303450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_35296614_35300334_35301102_35302057_35302158_35302882
m54284U_201203_174622/51971716/ccs	chr13	+	2709	11	NNC	ENSMUSG00000035139.15	novel	784	3	NA	NA	-11252	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	44.4886502380101	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGCTATTGTGATCTT	4850	False	NA	8	True	AATAAA	-20	NA	51822516	51838080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_51823075_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
m54284U_201203_174622/52035781/ccs	chrX	+	3704	24	NIC	ENSMUSG00000031153.17	novel	3156	25	NA	NA	0	0	intron_retention	FALSE	canonical	2	42	junction_23	10.5842555254659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGTCTCATTCTTTTC	3259	False	NA	11	True	NA	NA	NA	7656232	7686806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7685561_7686240
m54284U_201203_174622/52036663/ccs	chr9	-	5657	5	NIC	ENSMUSG00000039952.16	novel	4415	4	NA	NA	0	-232	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	191.259476889382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108140950	108082064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108086861_108095211_108095610_108120087_108120223_108130299_108130357_108140679
m54284U_201203_174622/52038117/ccs	chr11	+	4265	16	NNC	ENSMUSG00000017548.16	novel	4373	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_13	446.1818264141	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGGTCTGCATTGTTAT	NA	False	NA	37	True	TATAAA	-22	NA	79883931	79924949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79920081_79920173_79920832_79920913_79922670
m54284U_201203_174622/52102534/ccs	chr13	+	5230	12	NIC	ENSMUSG00000041817.15	novel	4547	13	NA	NA	0	-715	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	80.1011756911685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTTGTGTTTTAAATTT	8717	False	NA	NA	False	ATTAAA	-23	NA	97208150	97266806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_97208220_97228325_97228461_97230569_97230656_97234047_97234220_97243461_97243642_97246530_97246660_97247803_97247911_97250146_97250187_97250616_97250768_97254882_97255040_97259199_97259401_97263003
m54284U_201203_174622/52103571/ccs	chr5	-	3615	13	NIC	ENSMUSG00000029475.18	novel	5180	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_12	99.7441170640599	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACACTGTGTTTGAGGGT	NA	False	NA	NA	False	TATAAA	-21	NA	123060170	123008730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123059447_123059535_123059967
m54284U_201203_174622/52103729/ccs	chr6	+	3238	14	NIC	ENSMUSG00000071337.12	novel	4477	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_7	51.8881363919042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTGTAAACTTCTACA	9766	False	NA	22	True	AATAAA	-24	NA	86381285	86409167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86400587_86400654_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
m54284U_201203_174622/52167918/ccs	chr2	+	3033	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_16	158.982817726256	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	656	False	NA	36	True	AATAAA	-37	NA	31462825	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31505509_31505638_31506190
m54284U_201203_174622/52168569/ccs	chr14	-	2688	7	NIC	ENSMUSG00000021824.14	novel	1770	9	NA	NA	0	1204	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	106.531163932855	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTTTTAAAGTTTGA	NA	False	NA	-11	True	AATAAA	-14	NA	21102290	21084877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21102207
m54284U_201203_174622/52168634/ccs	chr2	-	6019	33	NIC	ENSMUSG00000040687.17	novel	5905	35	NA	NA	0	0	intron_retention	TRUE	canonical	2	6	junction_22	4.65991885658967	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGCTCCTGTGCACTCC	NA	False	NA	-1	True	AATAAA	-15	NA	91013392	90967704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_90968747_90969053_90969101_90970901_90970972_90973100_90973208_90973359_90973433_90973866_90974032_90977183_90977292_90982798_90982910_90984779_90984886_90984989_90985111_90985890_90985994_90988329_90988489_90988761_90988834_90989549_90989651_90992372_90992580_90992826_90992978_90993071_90993259_90993843_90993947_90995710_90995813_90996890_90997031_90997258_90997513_90997872_90998064_90998155_90998260_91000045_91000203_91000361_91000598_91000913_91001093_91003457_91003539_91005987_91006102_91006500_91006633_91007150_91007455_91008244_91008842_91009523_91009667_91013140
m54284U_201203_174622/52168906/ccs	chr13	+	4915	23	NNC	ENSMUSG00000021500.18	novel	5676	23	NA	NA	0	-2132	intron_retention	FALSE	non_canonical	0	0	junction_19	105.856209974109	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCCTTTCAGTGGAAT	NA	False	NA	17	True	AATAAA	-26	NA	55782839	55826937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55808283_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
m54284U_201203_174622/52169438/ccs	chrX	+	3632	13	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	216.894559636705	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350092_158350362_158350914_158351011_158357940_158358094_158375066
m54284U_201203_174622/52232304/ccs	chr15	+	1811	9	NIC	ENSMUSG00000009585.19	novel	1953	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	239.760785732363	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAGACAAGATTAAGT	8246	False	NA	-6	True	NA	NA	NA	79776603	79792107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_79776641_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
m54284U_201203_174622/52232417/ccs	chr17	-	4237	7	NNC	ENSMUSG00000036568.8	novel	6575	11	NA	NA	-246	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_6	43.9523100138725	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCACTGTGATTGTCTT	NA	False	NA	-4	True	AATACA	-19	NA	47123357	47109045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47123334
m54284U_201203_174622/52232461/ccs	chr19	-	4233	5	NIC	ENSMUSG00000024764.11	novel	3231	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	441	junction_1	36.9932426261878	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGGGATGGCATCCAG	NA	False	NA	-20	True	AATAAA	-16	NA	7218421	7203037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7205457_7205716_7205795_7207086_7207649_7211468_7212524_7218302
m54284U_201203_174622/52232517/ccs	chr5	+	2660	3	NNC	ENSMUSG00000054720.13	novel	6976	4	NA	NA	-13465	2086	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	10.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTAAAGTTTTATTTGT	8905	False	NA	NA	False	AATAAA	-28	NA	105693258	105756824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_105693317_105727333_105727476_105754364
m54284U_201203_174622/52232881/ccs	chr14	+	3971	8	NIC	ENSMUSG00000016831.13	novel	5350	10	NA	NA	0	-1889	intron_retention	FALSE	canonical	3	458	junction_3	40.0871499590172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTTAAATGTGCATTC	NA	False	NA	8	True	AGTAAA	-20	NA	52517073	52531969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_52517114_52517277_52517347_52523116_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
m54284U_201203_174622/52234183/ccs	chr9	+	7564	24	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	57.6555182976455	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335334	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118408609_118408675_118410916
m54284U_201203_174622/52299320/ccs	chr12	-	2978	1	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638772	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111635800_111638800
m54284U_201203_174622/52364194/ccs	chr12	+	6264	26	NIC	ENSMUSG00000020590.17	novel	6231	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_17	18.4266763145175	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTGTTTACTTGGCA	NA	False	NA	NA	False	AATAAA	-16	NA	35097184	35197478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169731_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
m54284U_201203_174622/52365778/ccs	chr14	+	4455	26	NNC	ENSMUSG00000030662.11	novel	4518	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	75	junction_24	242.151014038761	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGCATTACTTCATTA	1840	False	NA	16	True	ATTAAA	-17	NA	121148644	121185411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183542_121183631_121184130
m54284U_201203_174622/52429686/ccs	chr11	-	175	1	Intergenic	novelGene_6171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAGAGAGAGA	-2	True	NA	NA	False	NA	NA	NA	87294056	87293881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87293900_87294100
m54284U_201203_174622/52431252/ccs	chr3	+	2794	5	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	51	0	intron_retention	FALSE	canonical	3	2720	junction_4	107.463947442852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87813678	87823439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87814022_87820397_87820475_87820619_87821545_87821779_87821998_87822208
m54284U_201203_174622/5243863/ccs	chr18	+	2378	15	NNC	ENSMUSG00000025423.17	novel	3060	14	NA	NA	-26794	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	341.46650267483	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTCTAATTAAAGATG	6291	False	NA	13	True	AATAAA	-26	NA	77126109	77240813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_77126175_77126529_77126678_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
m54284U_201203_174622/5243906/ccs	chr18	+	4182	22	NIC	ENSMUSG00000024498.17	novel	4417	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	165.305338314537	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663694_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
m54284U_201203_174622/5243941/ccs	chr19	-	1966	8	NIC	ENSMUSG00000024640.10	novel	2617	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	1150.5794813298	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCATTGCCTGTGAAT	NA	False	NA	-17	True	ATTAAA	-17	NA	15902294	15882493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15898299_15898361_15902227
m54284U_201203_174622/52494429/ccs	chr16	-	2307	14	NNC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_10	140.92924910904	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406410	30380188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399868_30400873_30400961_30401348_30401470_30404371_30404499_30406255
m54284U_201203_174622/52494500/ccs	chr3	-	7266	18	NIC	ENSMUSG00000061175.13	novel	7299	18	NA	NA	-205	-284	combination_of_known_junctions	TRUE	canonical	3	39	junction_17	21.062273788996	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTTATTCTCCTAGTG	NA	False	NA	-16	True	AATAAA	-14	NA	79439388	79363564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79438849
m54284U_201203_174622/52494601/ccs	chr11	-	194	1	Intergenic	novelGene_6072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTTTTTACCCAGGA	NA	False	NA	NA	False	NA	NA	NA	78635847	78635653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_78635700_78635800
m54284U_201203_174622/52495853/ccs	chr1	+	4140	25	NIC	ENSMUSG00000026104.15	novel	5151	25	NA	NA	0	-81	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8.09663853432741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTATGAGTTGGTTTAAT	3298	False	NA	NA	False	TATAAA	-18	NA	52158648	52200085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_52158783_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
m54284U_201203_174622/525037/ccs	chr9	+	4855	18	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_13	84.1275189600096	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTGAAATGGCCTG	NA	False	NA	23	True	AATAAA	-15	NA	109760867	109912241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
m54284U_201203_174622/52561548/ccs	chr13	+	5834	23	NIC	ENSMUSG00000017756.10	novel	5142	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	635	junction_9	57.6726477415478	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGTGCCTCATTTCCA	NA	False	NA	104	True	AGTAAA	-29	NA	73911825	73964873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
m54284U_201203_174622/52562284/ccs	chr5	-	6652	9	NNC	ENSMUSG00000000568.16	novel	6811	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	15	junction_1	1501.32041362762	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTGCACTGTCTTTT	NA	False	NA	1	True	ATTAAA	-19	NA	100126797	100103793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100105965_100106066_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
m54284U_201203_174622/52691552/ccs	chr17	+	4559	23	NNC	ENSMUSG00000024201.13	novel	4577	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_22	39.7690907428419	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGCTGTGTCTTCATT	4897	False	NA	18	True	ATTAAA	-34	NA	56633061	56709870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701789_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708301_56708545
m54284U_201203_174622/52691651/ccs	chr4	+	5617	7	NIC	ENSMUSG00000059939.14	novel	2937	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_1	43.7483333015861	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8271	False	NA	22	True	NA	NA	NA	156194454	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156206874_156207991_156208127_156208432_156208580_156209873
m54284U_201203_174622/52691726/ccs	chr7	+	2376	17	NIC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	63.8620339090449	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAGTTTCTAATGCTTC	NA	False	NA	9	True	AATAAA	-20	NA	48438779	48477188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_48438886_48445653_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
m54284U_201203_174622/52692224/ccs	chr4	+	1356	12	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	338.008680019604	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGCTGAGCCCTGGAT	6624	False	NA	15	True	AATAAA	-26	NA	135975283	136002209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_135975429_135978566_135978693_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992240_135995319_135995475_135998543_135998691_136000954_136001027_136002090
m54284U_201203_174622/52757536/ccs	chr18	+	171	1	Intergenic	novelGene_9007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTTTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	68137248	68137419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_68137200_68137400
m54284U_201203_174622/52758695/ccs	chr7	+	4987	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_14	17.3487634094403	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311774	118336247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118334490
m54284U_201203_174622/52759307/ccs	chr11	-	1161	4	NNC	ENSMUSG00000018509.9	novel	492	4	NA	NA	0	-3109	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	655.301966017703	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTCAAAAATGTTAAATTT	8371	False	NA	NA	False	TTTAAA	-4	NA	62430087	62421427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_62422014_62424710_62424781_62427107_62427207_62429681
m54284U_201203_174622/52824198/ccs	chr2	+	3709	3	NIC	ENSMUSG00000078872.10	novel	948	4	NA	NA	0	2509	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	148.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGCAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	176766112	176781649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_176766152_176776035_176776163_176778106
m54284U_201203_174622/52824567/ccs	chr9	+	3472	11	NIC	ENSMUSG00000040875.13	novel	2477	12	NA	NA	-142	1043	combination_of_known_splicesites	FALSE	canonical	2	9	junction_3	22.127132665576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACTCTTGTGTCTTGTG	NA	False	NA	NA	False	AATATA	-9	NA	114807494	115062336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927_115059082_115061179
m54284U_201203_174622/52889584/ccs	chr2	+	4681	1	NIC	ENSMUSG00000027176.9	novel	2817	21	NA	NA	0	-14217	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAATAAGAAAAGCATC	6909	False	NA	NA	False	NA	NA	NA	104420876	104425557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_104420900_104425600
m54284U_201203_174622/52889819/ccs	chr19	+	3539	11	NIC	ENSMUSG00000034820.5	novel	3315	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	93.34157701689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTTATACTGCATTGT	NA	False	NA	16	True	AATAAA	-16	NA	10502629	10525017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10502692_10503315_10503425_10509144_10509364_10509494_10509561_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
m54284U_201203_174622/52954159/ccs	chr13	-	218	1	Intergenic	novelGene_7127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGCCATTGGTTGTCTAA	NA	False	NA	NA	False	NA	NA	NA	58681408	58681190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58681200_58681400
m54284U_201203_174622/53018786/ccs	chr17	-	178	1	Intergenic	novelGene_8785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATAATATAAAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	88817295	88817117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_88817100_88817300
m54284U_201203_174622/53085572/ccs	chr5	-	192	1	Intergenic	novelGene_2909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTAATAAATAATAATTAAA	NA	False	NA	NA	False	NA	NA	NA	124749010	124748818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124748800_124749000
m54284U_201203_174622/53086823/ccs	chr5	+	181	1	Intergenic	novelGene_2785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTTTCTTTTTTTATA	NA	False	NA	NA	False	NA	NA	NA	114233442	114233623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_114233400_114233600
m54284U_201203_174622/5309787/ccs	chr14	-	3890	24	NIC	ENSMUSG00000021952.17	novel	8680	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	67	junction_22	80.9376057852328	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACAGAGCTATAAGCTT	NA	False	NA	NA	False	NA	NA	NA	57902692	57819727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57880791_57880947_57885875_57885982_57902344
m54284U_201203_174622/5310101/ccs	chr1	-	2995	10	NIC	ENSMUSG00000026277.15	novel	2821	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_6	13.6137185711081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGTACAGAGCCTGGC	NA	False	NA	-36	True	AATAAA	-19	NA	93563351	93549623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553689_93553772_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
m54284U_201203_174622/5310266/ccs	chr13	+	2287	9	NNC	ENSMUSG00000021509.6	novel	3374	8	NA	NA	-568	-2332	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	5.67340285895511	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATGTGTTTTTGCGTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	56585599	56619720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_56585844_56585944_56586349_56590601_56590646_56596810_56596883_56598833_56599093_56611315_56611559_56612767_56612902_56618162_56618294_56618964
m54284U_201203_174622/53151115/ccs	chr1	+	5465	6	NIC	ENSMUSG00000050565.17	novel	5135	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	45.283992756823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCGGTTGTTAGTG	NA	False	NA	51	True	AATAAA	-14	NA	155916635	155944607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_155916749_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
m54284U_201203_174622/53152550/ccs	chr2	-	172	1	Intergenic	novelGene_977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGAGAGAGCAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	107698736	107698564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_107698600_107698700
m54284U_201203_174622/53217791/ccs	chr7	-	2670	11	NIC	ENSMUSG00000008318.11	novel	2851	11	NA	NA	0	-323	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	10.0179838290946	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGAGGTGCTTCCTTTC	2198	False	NA	-3	True	AATAAA	-15	NA	100512613	100495376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512318
m54284U_201203_174622/53282039/ccs	chr4	+	5349	22	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_8	142.356790432747	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/53346544/ccs	chr6	+	5864	19	NIC	ENSMUSG00000071226.12	novel	9212	19	NA	NA	0	889	combination_of_known_junctions	FALSE	canonical	3	53	junction_14	28.4433593543032	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGAGTTTCAAGTCTTTG	NA	False	NA	-4	True	AATAAA	-14	NA	120643329	120744754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120720743_120720828_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733815_120734526_120734653_120734775_120735593_120738104_120739519_120742232_120742345_120743372
m54284U_201203_174622/53348970/ccs	chr11	+	4302	21	NNC	ENSMUSG00000036644.16	novel	4407	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	33.4159767177319	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTGTGTGCAGTGCTT	NA	False	NA	7	True	AATAAA	-20	NA	50022222	50062857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042250_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
m54284U_201203_174622/53349080/ccs	chr4	-	3533	20	NNC	ENSMUSG00000029060.18	novel	3642	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_17	92.2052690161958	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTTCCTGTTCCTTGC	7420	False	NA	-5	True	TATAAA	-13	NA	155753655	155739138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745779_155745832_155751470_155751627_155753030
m54284U_201203_174622/53478558/ccs	chr15	-	199	1	Intergenic	novelGene_7651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAACTCAGCAATCCCAGA	NA	False	NA	NA	False	NA	NA	NA	20042275	20042076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_20042100_20042300
m54284U_201203_174622/53479337/ccs	chr2	-	3563	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	88	junction_20	47.1269296687149	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782361	11747385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782214
m54284U_201203_174622/53543274/ccs	chr14	+	3783	6	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2317	junction_3	146.911674144705	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296835	14303777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_14296883_14296955_14298351_14298443_14300065_14300336_14300429_14302918_14303061_14303291
m54284U_201203_174622/53544172/ccs	chr5	+	9178	21	NIC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	30.7602015598078	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGAAGAAATCCTT	NA	False	NA	18	True	AATAAA	-16	NA	65921462	65987451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
m54284U_201203_174622/53544318/ccs	chr17	+	4344	28	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_10	431.054991892758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9538	False	NA	10	True	AATAAA	-11	NA	35220026	35235298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
m54284U_201203_174622/53545609/ccs	chr14	-	1829	10	NIC	ENSMUSG00000022160.19	novel	2025	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_7	51.3181795814656	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTGAAGTGAAATTAT	NA	False	NA	-32	True	AATAAA	-23	NA	52542581	52532313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52537157_52537563_52537640_52537859_52542344
m54284U_201203_174622/53610079/ccs	chrX	-	179	1	Intergenic	novelGene_9379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGATGTAGAAGTCT	NA	False	NA	NA	False	NA	NA	NA	8155769	8155590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_8155600_8155800
m54284U_201203_174622/53610224/ccs	chr11	-	2392	12	NIC	ENSMUSG00000000384.16	novel	2290	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_8	147.44311131545	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTATCTTCCCAGGCT	NA	False	NA	-27	True	AATAAA	-19	NA	6576067	6566422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570222_6570741_6571066_6573815_6574284_6575148_6575214_6575964
m54284U_201203_174622/53675839/ccs	chr2	+	7839	15	NIC	ENSMUSG00000005506.17	novel	7614	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_14	222.666585196938	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836976_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
m54284U_201203_174622/53676465/ccs	chr10	-	183	1	Intergenic	novelGene_5533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAAGCTGGACAGTAG	NA	False	NA	NA	False	NA	NA	NA	108317540	108317357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_108317400_108317500
m54284U_201203_174622/53741585/ccs	chr11	+	3604	17	NNC	ENSMUSG00000020785.18	novel	3424	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	7.21543484483091	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTATGTCTTCTGCA	NA	False	NA	NA	False	AATAAA	-29	NA	72909833	72932899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_72909954_72910193_72910339_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
m54284U_201203_174622/5375127/ccs	chr11	-	3809	10	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	486	junction_1	47.3328116820499	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100240446_100242035_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201203_174622/5375357/ccs	chr2	+	2259	5	NNC	ENSMUSG00000026811.19	novel	2536	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	39.7264080933577	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTCTGTGTCTTTA	3354	False	NA	7	True	AATAAA	-16	NA	32497022	32510818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_32497124_32502235_32502416_32504792_32505200_32508508_32508617_32509355
m54284U_201203_174622/5376388/ccs	chr12	-	189	1	Intergenic	novelGene_6565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATCAAATTCTGCAGGC	NA	False	NA	NA	False	NA	NA	NA	11174402	11174213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_11174200_11174400
m54284U_201203_174622/53870759/ccs	chr6	+	6600	38	NIC	ENSMUSG00000063870.13	novel	6697	39	NA	NA	0	0	intron_retention	FALSE	canonical	3	138	junction_8	109.498624958429	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1789	False	NA	14	True	AATAAA	-18	NA	125073124	125107554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
m54284U_201203_174622/53870890/ccs	chr19	+	5837	19	ISM	ENSMUSG00000046139.9	ENSMUST00000238190.2	3158	20	179	-1088	179	0	3prime_fragment	FALSE	canonical	3	28	junction_4	83.3967906538257	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGATGTCCATCTCT	NA	False	NA	21	True	AATAAA	-11	NA	11889985	11922455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899284_11899359_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
m54284U_201203_174622/53937105/ccs	chr10	-	2117	6	NIC	ENSMUSG00000004667.19	novel	1148	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	2552	junction_2	154.463458461864	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTGCAATCCTAGAGA	5600	False	NA	-19	True	ATTAAA	-19	NA	79875544	79871782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79874448_79875416
m54284U_201203_174622/54001956/ccs	chr15	+	1870	13	NNC	ENSMUSG00000033047.6	novel	1942	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	486.897569367065	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTCTCATTATTAT	NA	False	NA	30	True	AGTAAA	-20	NA	78959447	78978605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_78959493_78959970_78960020_78961033_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
m54284U_201203_174622/54002747/ccs	chr5	-	3163	5	NIC	ENSMUSG00000039737.12	novel	3893	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	535	junction_2	13.3860935302276	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTTGTCCACACGTGCG	NA	False	NA	-13	True	AGTAAA	-16	NA	136227764	136209937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_136210351_136218405_136220840_136223150_136223252_136226633_136226713_136227628
m54284U_201203_174622/54004348/ccs	chr17	+	4159	29	NIC	ENSMUSG00000007029.17	novel	4137	30	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	334.285370878944	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	9538	False	NA	10	True	AATAAA	-11	NA	35220026	35235298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
m54284U_201203_174622/54067221/ccs	chr11	+	163	1	Intergenic	novelGene_6149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGTAGTGATCA	9873	False	NA	NA	False	NA	NA	NA	85749829	85749992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_85749800_85750000
m54284U_201203_174622/54132835/ccs	chr10	-	5637	15	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	103.307175205692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80383426_80383606_80383821_80384265_80384368_80385166_80386900_80397097
m54284U_201203_174622/54133949/ccs	chr6	-	2197	9	NIC	ENSMUSG00000030268.18	novel	2556	11	NA	NA	86	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_8	1330.77702865657	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTGGATTTGAATC	8571	False	NA	-24	True	AATAAA	-16	NA	145021824	144944883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_145021614
m54284U_201203_174622/54134511/ccs	chr5	-	2924	19	NIC	ENSMUSG00000041890.18	novel	2984	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	58.7622327690158	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGTCTCCATAATGT	NA	False	NA	-2	True	TATAAA	-14	NA	114911556	114867635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
m54284U_201203_174622/54198906/ccs	chr7	-	1227	2	Intergenic	novelGene_3936	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGTATCTGCATTAAT	NA	False	NA	NA	False	AATAAA	-23	NA	81814508	81761690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_81762785_81814375
m54284U_201203_174622/54199140/ccs	chr7	+	741	4	NNC	ENSMUSG00000097277.8	novel	725	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	40.7458245986288	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTTGGGTATTATG	NA	False	NA	8	True	AATAAA	-13	NA	81173310	81181246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_81173429_81178534_81178689_81179094_81179276_81180958
m54284U_201203_174622/54199190/ccs	chr5	+	4812	5	NIC	ENSMUSG00000029234.14	novel	1897	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1062	junction_3	79.2665597840603	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTCCTCGTGTGTTA	606	False	NA	7	True	AATAAA	-15	NA	76331796	76357092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76355755_76356356
m54284U_201203_174622/54199852/ccs	chr10	-	1441	9	NNC	ENSMUSG00000061904.13	novel	1612	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	1806.70099905878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTATGAGTTTGTTATTT	NA	False	NA	-4	True	AATAAA	-16	NA	90959819	90952652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90956486_90956635_90957783_90957906_90959419_90959569_90959777
m54284U_201203_174622/54200714/ccs	chr12	+	811	2	NNC	ENSMUSG00000046675.8	novel	3367	2	NA	NA	0	-2160	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACTTTGCTTGCTTTAA	NA	False	NA	1	True	CATAAA	-16	NA	102710020	102711660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_102710030_102710858
m54284U_201203_174622/54266567/ccs	chr2	-	4162	28	NIC	ENSMUSG00000027284.17	novel	6384	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_25	19.309123482361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6114	False	NA	NA	False	AATAAA	-15	NA	120561999	120548666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560949_120560987_120561182_120561674_120561892
m54284U_201203_174622/54329371/ccs	chr9	+	7499	23	NIC	ENSMUSG00000038708.11	novel	7583	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	54.2322256367988	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAGTGTTCATTGTGCTT	NA	False	NA	7	True	AATAAA	-15	NA	118335334	118411587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
m54284U_201203_174622/54329676/ccs	chrX	+	3712	14	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_2	441.918343684902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201203_174622/54330133/ccs	chr18	-	3163	9	NNC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_5	66.2324269146164	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70600557_70600913_70601589_70602519_70602849_70604743_70605051_70605361
m54284U_201203_174622/54330480/ccs	chr4	-	2259	12	NIC	ENSMUSG00000028538.13	novel	2225	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	26.8084728187943	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1862	False	NA	-7	True	AATAAA	-12	NA	117992111	117789356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745_117964891_117991930
m54284U_201203_174622/54331684/ccs	chr2	-	173	1	Intergenic	novelGene_1327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATCTTAAAAA	2189	False	NA	NA	False	NA	NA	NA	181200821	181200648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181200600_181200800
m54284U_201203_174622/54331967/ccs	chr1	+	3100	16	NNC	ENSMUSG00000058729.14	novel	3160	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	32.1742478112888	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTGAGAATCTTACT	NA	False	NA	9	True	AATAAA	-19	NA	180468917	180518252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_180468963_180469414_180469558_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
m54284U_201203_174622/5440735/ccs	chr11	-	4609	17	NNC	ENSMUSG00000009073.17	novel	2394	17	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	87.8527710149202	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTCGAGTTTTTTTTTT	9016	False	NA	-8	True	AATAAA	-21	NA	4799365	4715844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_4718274_4730562_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
m54284U_201203_174622/5441806/ccs	chr9	-	3871	19	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-133	intron_retention	FALSE	canonical	3	27	junction_4	152.245953138051	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469252	114415166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114425672_114425740_114426546_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
m54284U_201203_174622/5442290/ccs	chr11	-	5828	11	NIC	ENSMUSG00000020362.14	novel	5736	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	170	junction_10	17.8440466262561	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAAAGTGTAGTTTG	NA	False	NA	-10	True	AATAAA	-19	NA	49603550	49562329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
m54284U_201203_174622/54462707/ccs	chr5	+	6995	64	NNC	ENSMUSG00000029414.12	novel	6961	64	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	87.50092394142	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTTCTTGTGTCATT	NA	False	NA	29	True	AATAAA	-21	NA	123887788	123959656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896471_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
m54284U_201203_174622/54463136/ccs	chr8	-	2526	2	NNC	ENSMUSG00000037070.11	novel	1622	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCTTGATTTCTCC	NA	False	NA	NA	False	AGTAAA	-18	NA	79235508	79231897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_79233447_79234531
m54284U_201203_174622/54463210/ccs	chr5	+	5967	5	NNC	ENSMUSG00000029249.16	novel	7004	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	349.611480789748	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGACCTTTGTTTATTATT	3696	False	NA	14	True	AATAAA	-14	NA	77413337	77434279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549_77430864_77431900
m54284U_201203_174622/54527194/ccs	chr4	+	4801	9	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_4	142.782997499702	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21871609_21873585
m54284U_201203_174622/54527581/ccs	chr11	+	2477	11	NIC	ENSMUSG00000057522.16	novel	3063	10	NA	NA	0	-396	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	75.6534202795881	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTGTGTGGTATCTCTG	NA	False	NA	1	True	TATAAA	-13	NA	95304923	95383836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_95304968_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
m54284U_201203_174622/54527850/ccs	chr17	+	2749	19	NIC	ENSMUSG00000000127.16	novel	2973	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_10	30.9070689904469	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTATTAGCTAACCACAG	NA	False	NA	4	True	AATAAA	-15	NA	64171009	64446192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_64171051_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
m54284U_201203_174622/54658865/ccs	chr6	-	5175	23	NIC	ENSMUSG00000045095.17	novel	7929	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	7.90386452187569	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTTTTTGAAAATTAT	NA	False	NA	-1	True	ATTAAA	-19	NA	94260898	93655016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671193_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184_93920302_94259990
m54284U_201203_174622/54659676/ccs	chr18	+	2236	1	NIC	ENSMUSG00000024400.17	novel	1756	2	NA	NA	0	-22519	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAGAAAAAGTAA	5655	False	NA	NA	False	NA	NA	NA	31937150	31939386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_31937200_31939400
m54284U_201203_174622/54722866/ccs	chr19	-	3415	18	NIC	ENSMUSG00000025007.14	novel	3427	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_17	339.687267124287	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576867	40538700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562660_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40576753
m54284U_201203_174622/54855011/ccs	chr17	-	616	6	NNC	ENSMUSG00000052146.17	novel	887	6	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	2377.01252836412	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCACTTGTGTATGTT	NA	False	NA	NA	False	AATAAA	-14	NA	27854272	27849397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853317_27853450_27854177
m54284U_201203_174622/54919435/ccs	chr2	+	176	1	Intergenic	novelGene_930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATAAGCTCAATTC	NA	False	NA	NA	False	NA	NA	NA	91252883	91253059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91252900_91253100
m54284U_201203_174622/54921143/ccs	chr10	-	5227	30	NIC	ENSMUSG00000020198.9	novel	4805	31	NA	NA	0	0	intron_retention	FALSE	canonical	1	82	junction_14	56.0203589627158	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTTGTGTCCCCAT	9208	False	NA	-2	True	ATTAAA	-14	NA	80578098	80542789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
m54284U_201203_174622/54921902/ccs	chr14	-	183	1	Intergenic	novelGene_7528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAGGTCACTAATTAG	NA	False	NA	NA	False	NA	NA	NA	68327259	68327076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_68327100_68327300
m54284U_201203_174622/54985436/ccs	chr4	+	4630	18	NNC	ENSMUSG00000029056.14	novel	2706	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_8	41.4409990394064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGAGAAGCAGTGTCT	NA	False	NA	NA	False	NA	NA	NA	155048589	155065395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056886_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063411_155063483_155063948_155064050_155064182_155064252_155064951
m54284U_201203_174622/54986310/ccs	chr2	+	4176	13	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	983	intron_retention	FALSE	canonical	3	2736	junction_7	187.297650071276	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896542	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201203_174622/55050467/ccs	chr2	-	2988	11	NIC	ENSMUSG00000061411.13	novel	6399	11	NA	NA	-302	-3691	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	26.7546257682667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTGTGTCTGTCTA	NA	False	NA	NA	False	NA	NA	NA	153372193	153253076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262469_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
m54284U_201203_174622/55051047/ccs	chr4	-	2321	9	NIC	ENSMUSG00000028873.17	novel	1626	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1430	junction_5	130.355283744082	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCGGTCATCTGCATT	NA	False	NA	-10	True	AATAAA	-26	NA	124830710	124812257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
m54284U_201203_174622/55051089/ccs	chr17	+	4501	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16073	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	13.6679369328366	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	2020	False	NA	20	True	AATAAA	-25	NA	47507239	47670388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630545_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
m54284U_201203_174622/55051732/ccs	chr7	+	1105	7	NNC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	577.0184861279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358636	25367457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_25358809_25360685_25360819_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
m54284U_201203_174622/5505266/ccs	chr4	-	2875	15	NNC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_12	246.357349956422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	False	NA	-3	True	ATTAAA	-18	NA	48473459	48430857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468753_48468994_48469883_48470073_48473019
m54284U_201203_174622/55053132/ccs	chr17	-	2223	13	NIC	ENSMUSG00000023942.16	novel	1996	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1453	junction_5	323.049746771126	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906498	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
m54284U_201203_174622/5505429/ccs	chr5	+	10435	26	NIC	ENSMUSG00000041147.11	novel	10517	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_11	37.9278051039076	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACTGGCTAAGTATGGT	370	False	NA	13	True	AATAAA	-22	NA	150446094	150493212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
m54284U_201203_174622/5506648/ccs	chr18	-	4481	25	NIC	ENSMUSG00000024613.17	novel	4595	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	235	junction_15	290.105763759817	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982031	60946826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
m54284U_201203_174622/5507850/ccs	chr12	-	2004	7	NIC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7551	junction_5	330.812971665596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_111636176_111636258_111636449_111636595_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
m54284U_201203_174622/55116194/ccs	chr17	-	3328	7	NIC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	156	junction_3	26.5560204515327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCTTGCTCTGGGAGT	NA	False	NA	-10	True	AATAAA	-13	NA	75858868	75844089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_75845857_75845941_75846110_75846395_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
m54284U_201203_174622/55181431/ccs	chrX	+	3251	16	NIC	ENSMUSG00000031065.15	novel	3120	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_2	413.425602604494	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTTATAAATCATCAA	2324	False	NA	18	True	ATTAAA	-20	NA	20554656	20566119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20555046_20559562_20559771_20560145_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
m54284U_201203_174622/55182700/ccs	chr18	+	5570	3	NNC	ENSMUSG00000058881.14	novel	924	3	NA	NA	-15032	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	87	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTGACCTGTGGTT	NA	False	NA	52	True	NA	NA	NA	82990900	83023439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_82990974_83004868_83006324_83019397
m54284U_201203_174622/55183524/ccs	chr11	+	6688	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	168.270221025441	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899740	57952860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933391_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
m54284U_201203_174622/55313106/ccs	chr5	+	4937	6	NIC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	260.049687559897	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	8291	False	NA	8	True	AATAAA	-16	NA	64969726	64990244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
m54284U_201203_174622/55313148/ccs	chr14	+	7248	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	47.1299732123836	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21531501	21722201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21675284_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
m54284U_201203_174622/55314342/ccs	chr11	+	4346	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	112	-1200	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_23	103.32070577559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2028	False	NA	26	True	AATAAA	-16	NA	87018014	87110309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107400_87109077
m54284U_201203_174622/55377927/ccs	chr13	-	1190	8	NIC	ENSMUSG00000021460.18	novel	1320	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_4	139.021948054314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAGTTATACCAAATGT	NA	False	NA	-14	True	AATAAA	-22	NA	53083717	52989154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53052685_53052773_53073036_53073125_53073234_53073303_53083490
m54284U_201203_174622/55378640/ccs	chr8	-	6248	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_15	161.539959143241	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111556150_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
m54284U_201203_174622/55380002/ccs	chrX	+	5480	29	NIC	ENSMUSG00000037369.18	novel	5935	29	NA	NA	0	-414	combination_of_known_junctions	FALSE	canonical	3	24	junction_28	53.1090522281412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTGTTTGAGTTTTAA	NA	False	NA	10	True	ATTAAA	-23	NA	18028875	18145761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143803_18144864
m54284U_201203_174622/55444307/ccs	chr1	+	5564	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_28	64.6690554646801	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4070	False	NA	20	True	AATAAA	-24	NA	87781008	87872212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87870104
m54284U_201203_174622/55445083/ccs	chr17	+	2329	12	ISM	ENSMUSG00000024209.10	ENSMUST00000025048.7	2677	14	1721	0	1695	0	3prime_fragment	TRUE	canonical	3	15	junction_6	15.5260378474249	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCTCGCACCCCGAGGT	NA	False	NA	16	True	ATTAAA	-16	NA	57184197	57195904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_57184590_57187450_57187540_57187945_57188067_57189166_57189248_57189540_57189691_57189779_57189987_57190315_57190498_57190626_57190861_57191750_57191969_57192083_57192224_57193440_57193688_57195636
m54284U_201203_174622/55445834/ccs	chrX	-	174	1	Intergenic	novelGene_9652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCAGGAGGAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	143029801	143029627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_143029600_143029800
m54284U_201203_174622/55445978/ccs	chr15	-	3456	14	NIC	ENSMUSG00000023050.10	novel	4318	16	NA	NA	0	-418	combination_of_known_splicesites	FALSE	canonical	2	3	junction_13	20.1934431915163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGAGGGTTTTCTTGGT	NA	False	NA	0	True	AATATA	-21	NA	102419135	102407877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102419018
m54284U_201203_174622/55511718/ccs	chr17	+	5742	26	NIC	ENSMUSG00000024219.17	novel	6846	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	15.1100496359211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTTTGTTTGAATTATAA	4239	False	NA	14	True	CATAAA	-15	NA	28128279	28281573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28277721_28277821_28278267_28278366_28279535
m54284U_201203_174622/55640848/ccs	chr11	-	2178	1	Genic_Genomic	ENSMUSG00000020419.12	novel	NA	NA	NA	NA	-61	-11675	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4391166	4388988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_-_4389000_4391200
m54284U_201203_174622/55641457/ccs	chr10	+	4435	9	NIC	ENSMUSG00000034854.9	novel	3971	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	201	junction_8	23.7404586097236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGTCAACCCTTTACAG	883	False	NA	30	True	AATAAA	-21	NA	81193385	81202059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81199518_81199603
m54284U_201203_174622/55642820/ccs	chr1	-	1382	12	NIC	ENSMUSG00000026309.15	novel	1368	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_9	124.787157635487	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTGAGTGACTGGTCC	NA	False	NA	-8	True	AATAAA	-18	NA	91326537	91303552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316169_91318328_91318386_91318853_91318920_91326372
m54284U_201203_174622/55706529/ccs	chr9	+	3728	22	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_21	52.681862958776	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5736	False	NA	19	True	AATAAA	-19	NA	21249123	21266324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264469_21264977
m54284U_201203_174622/55707886/ccs	chr11	-	3162	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_13	517.697325384301	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615168
m54284U_201203_174622/55771205/ccs	chr15	-	3294	7	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_3	174.032005357891	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816969	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79802252_79802477_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79816648
m54284U_201203_174622/55772310/ccs	chrX	+	3763	10	NIC	ENSMUSG00000031311.18	novel	2562	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	3075	junction_4	308.634987575219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGTGCTGTTTTTTTT	NA	False	NA	20	True	ATTAAA	-21	NA	100473340	100492197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
m54284U_201203_174622/55903801/ccs	chr8	-	5493	26	NNC	ENSMUSG00000033732.11	novel	4525	26	NA	NA	0	-253	intron_retention	FALSE	canonical	3	77	junction_15	204.661648581262	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCGTGTGTAGTTTTTG	NA	False	NA	-28	True	TATAAA	-17	NA	111573419	111537123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111552290_111552726_111552879_111556150_111556180_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
m54284U_201203_174622/55968369/ccs	chr17	-	4346	15	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	584	junction_12	78.2061965810476	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923253_56923358_56923447_56924753_56924933_56925317_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
m54284U_201203_174622/56034836/ccs	chr11	-	2669	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	-26093	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	181.341004739689	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	NA	False	NA	-2	True	AATAAA	-19	NA	113482698	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113482607
m54284U_201203_174622/56035812/ccs	chr12	-	178	1	Intergenic	novelGene_6911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	111318439	111318261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111318300_111318400
m54284U_201203_174622/56099859/ccs	chr15	-	3921	23	NIC	ENSMUSG00000047921.18	novel	4048	22	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_3	48.4420075881827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTGATTTCAGACT	NA	False	NA	-1	True	AATAAA	-21	NA	72932899	72461468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_72462012_72462464_72462689_72557131_72557223_72565352_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72929770_72930364_72932809
m54284U_201203_174622/56101108/ccs	chr13	+	195	1	Intergenic	novelGene_7181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	66755648	66755843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_66755600_66755800
m54284U_201203_174622/56164360/ccs	chr6	-	1813	6	NNC	ENSMUSG00000004446.13	novel	2415	7	NA	NA	0	-266	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_5	358.381137896514	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGGGAGAGCTGTATC	NA	False	NA	-27	True	AATAAA	-15	NA	120893797	120870080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893787
m54284U_201203_174622/56164412/ccs	chr8	+	4311	5	NNC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-777	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_3	462.31340830653	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACATAAATATAAATAG	NA	False	NA	NA	False	AATAAA	-5	NA	20016465	20045111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_20016689_20030550_20030924_20035860_20036156_20039783_20039904_20041811
m54284U_201203_174622/56165251/ccs	chr11	+	4971	32	NIC	ENSMUSG00000020827.19	novel	4994	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_21	23.9682846289448	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGATCCTACTATTGT	1466	False	NA	NA	False	AATAAA	-24	NA	70453706	70505309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499414_70499526_70499665_70499785_70499991_70500081_70500379_70500544_70500906_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
m54284U_201203_174622/56165786/ccs	chr9	+	4046	16	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	196	0	intron_retention	FALSE	canonical	3	95	junction_1	92.3304692696596	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1498	False	NA	17	True	AATAAA	-18	NA	113760197	113806069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201203_174622/56166509/ccs	chr3	+	4945	8	NNC	ENSMUSG00000038205.13	novel	5006	8	NA	NA	150	0	intron_retention	FALSE	canonical	3	6	junction_1	26.4683098926136	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	97565679	97581128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_97565777_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
m54284U_201203_174622/56166920/ccs	chr3	+	2154	16	NNC	ENSMUSG00000033386.11	novel	6823	15	NA	NA	2106	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_1	74.6183176795975	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	116655321	116697127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_116655359_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
m54284U_201203_174622/56230126/ccs	chr18	-	3466	8	NNC	ENSMUSG00000044906.7	novel	1715	9	NA	NA	0	0	intron_retention	FALSE	canonical	2	10	junction_5	76.4495298366504	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600401_70601589_70602573_70602849_70604743_70605051_70605361
m54284U_201203_174622/56231243/ccs	chr9	-	2805	5	NIC	ENSMUSG00000032494.13	novel	1932	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	3873	junction_3	399.946480794618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110773312_110774891
m54284U_201203_174622/56361262/ccs	chr15	+	4430	16	NIC	ENSMUSG00000039458.16	novel	4359	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_14	81.1826472974504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTATTAGACTGAGTCAG	20	True	NA	NA	False	ATTAAA	-21	NA	12205113	12272205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236207_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266697_12266855_12269587
m54284U_201203_174622/56362716/ccs	chr9	-	2510	6	NIC	ENSMUSG00000039452.7	novel	2543	7	NA	NA	0	0	intron_retention	TRUE	canonical	1	2	junction_3	1.85472369909914	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGTCATTGTGTGGT	NA	False	NA	NA	False	AATAAA	-12	NA	65977001	65972457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_65974502_65974794_65974863_65975408_65975504_65975967_65976073_65976455_65976540_65976887
m54284U_201203_174622/5636586/ccs	chr11	-	176	1	Intergenic	novelGene_6492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	117728846	117728670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_117728700_117728800
m54284U_201203_174622/5636829/ccs	chr2	-	1985	10	NNC	ENSMUSG00000037813.14	novel	3910	14	NA	NA	17305	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	2.51415744421884	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTTTGTTTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	158053837	158037670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332_158050450_158052058_158052143_158053539_158053634_158053773
m54284U_201203_174622/5638952/ccs	chr13	+	3085	1	ISM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	16861	3189	16222	-3189	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACTCGTAGATCCATAC	NA	False	NA	NA	False	NA	NA	NA	90254102	90257187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_+_90254100_90257200
m54284U_201203_174622/56426618/ccs	chr13	+	8191	38	NIC	ENSMUSG00000048264.17	novel	8023	37	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	10.9053970327172	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGTTTCTTAATTGATA	NA	False	NA	26	True	AATAAA	-27	NA	9326563	9718964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_9327103_9543140_9543213_9544869_9545038_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
m54284U_201203_174622/56492372/ccs	chr4	-	4989	8	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1168	junction_4	209.984644725295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	False	NA	-4	True	AATAAA	-14	NA	141327235	141303372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141305255_141308293_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
m54284U_201203_174622/56493247/ccs	chr19	-	182	1	Intergenic	novelGene_9329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATACTTTAAAAGGTATAT	7095	False	NA	NA	False	NA	NA	NA	47538741	47538559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_47538600_47538700
m54284U_201203_174622/56494861/ccs	chr7	+	3261	14	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	0	intron_retention	FALSE	canonical	3	3307	junction_6	385.815190145159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758305	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201203_174622/56559284/ccs	chr6	-	4035	9	NIC	ENSMUSG00000003153.11	novel	6253	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	8407	junction_1	783.442393782083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATGTCACAAGCT	8913	False	NA	-21	True	AATAAA	-12	NA	122719481	122704784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122714258_122716791_122716953_122717346_122717440_122719334
m54284U_201203_174622/56559320/ccs	chr2	+	3533	10	NIC	ENSMUSG00000026977.18	novel	3594	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	112.133298101901	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAACTTTTTCCTTTTA	NA	False	NA	27	True	AATAAA	-24	NA	60040256	60079555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064277_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
m54284U_201203_174622/56560475/ccs	chr15	+	2612	17	NNC	ENSMUSG00000022477.14	novel	703	4	NA	NA	-3218	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	488.8619437019	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGCCTGAGTGATTGA	13	False	NA	19	True	AAAAAG	-16	NA	81776288	81799334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_81776360_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
m54284U_201203_174622/56624438/ccs	chrX	+	3741	13	NNC	ENSMUSG00000044150.13	novel	578	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	207.410154578367	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158309683	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158310201_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158374327_158374354_158375066
m54284U_201203_174622/56690825/ccs	chr19	+	4298	5	NIC	ENSMUSG00000025034.10	novel	3580	6	NA	NA	0	-393	intron_retention	FALSE	canonical	0	0	junction_1	466.050091191923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACAGCCCTTGTGGAGG	NA	False	NA	NA	False	NA	NA	NA	46490140	46504894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_46491453_46501161_46501258_46501546_46502924_46503060_46503177_46503497
m54284U_201203_174622/56691428/ccs	chr4	-	4009	1	Antisense	novelGene_ENSMUSG00000095567.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAAAACCTCTAAGTTAA	371	False	NA	NA	False	NA	NA	NA	156327191	156323182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_156323200_156327200
m54284U_201203_174622/56819865/ccs	chr7	+	5935	3	NIC	ENSMUSG00000049739.11	novel	2241	3	NA	NA	381	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	73	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTACTGGTGTGGTTA	1139	False	NA	16	True	AAAACA	-15	NA	127476348	127485164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127476385_127477741_127483091_127484614
m54284U_201203_174622/56821033/ccs	chr8	-	7708	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	284.722571476751	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
m54284U_201203_174622/56887893/ccs	chr7	+	2233	14	NNC	ENSMUSG00000002210.12	novel	2242	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	34.9034170348701	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	24099043	24122203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_24099317_24102816_24102973_24104951_24105027_24105121_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
m54284U_201203_174622/56951039/ccs	chr5	-	5599	31	NIC	ENSMUSG00000038095.16	novel	10161	32	NA	NA	0	1370	combination_of_known_junctions	FALSE	canonical	3	85	junction_29	90.1802454347218	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGTGGACTCTTGTTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	124563673	124511224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548443_124552461_124552591_124563509
m54284U_201203_174622/56951763/ccs	chr4	+	1250	8	NIC	ENSMUSG00000028410.14	novel	3376	9	NA	NA	0	-805	combination_of_known_junctions	FALSE	canonical	3	43	junction_2	994.047980610142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAAAGCTCTGACTTTGC	22	False	NA	1	True	AATAAA	-7	NA	40722558	40733095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_40722634_40723702_40723845_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
m54284U_201203_174622/56952212/ccs	chr8	-	1141	6	NIC	ENSMUSG00000035559.10	novel	980	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	11	junction_3	339.379787259053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTGCGTGTGGGTGGGTT	NA	False	NA	-2	True	ATTAAA	-17	NA	71213592	71211294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71211671_71211754_71211884_71212036_71212114_71212738_71212900_71213013_71213185_71213365
m54284U_201203_174622/56953651/ccs	chr17	+	3334	4	NIC	ENSMUSG00000041429.4	novel	1079	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	27	junction_1	106.436209377574	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGGCCCGTTGGCTT	908	False	NA	11	True	AATAAA	-23	NA	24851655	24857811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24852833_24852900_24854722_24857397_24857504_24857581
m54284U_201203_174622/57017015/ccs	chr5	+	5779	5	NIC	ENSMUSG00000004455.17	novel	1442	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	2504	junction_1	175.375311831512	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296418	122313332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122296679_122306237_122306370_122306981_122311019_122311208_122311344_122312117
m54284U_201203_174622/57082228/ccs	chr7	-	965	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	27.8960122598195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298334	30289105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30290295_30298204
m54284U_201203_174622/57083467/ccs	chr7	+	3705	10	ISM	ENSMUSG00000030811.15	ENSMUST00000033081.14	3410	11	1372	-555	0	0	3prime_fragment	FALSE	canonical	3	52	junction_5	24.111367126137	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	2905	False	NA	15	True	TATAAA	-19	NA	127347318	127368655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
m54284U_201203_174622/57150114/ccs	chr2	-	7387	16	NIC	ENSMUSG00000038914.16	novel	8723	16	NA	NA	0	-1036	combination_of_known_junctions	FALSE	canonical	3	75	junction_10	44.2520056042661	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGACTGGTGTAAGTT	NA	False	NA	NA	False	TATAAA	-12	NA	180351792	180300792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
m54284U_201203_174622/57215770/ccs	chr7	+	7197	25	NIC	ENSMUSG00000066306.14	novel	3450	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	84.2736943272072	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGCTAAGCTCTTTGG	NA	False	NA	28	True	AATAAA	-16	NA	101619386	101664162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101619562_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
m54284U_201203_174622/57280872/ccs	chr5	+	5165	16	NIC	ENSMUSG00000029101.17	novel	5472	17	NA	NA	0	3	intron_retention	FALSE	canonical	2	7	junction_15	4.72534537244516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGACTGGCTGGAAACTC	8634	False	NA	15	True	AATAAA	-15	NA	35106791	35190789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35189214
m54284U_201203_174622/57280932/ccs	chr15	-	2699	11	NIC	ENSMUSG00000022433.22	novel	2695	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	30	junction_10	157.551927947582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACCCTCTGTCTGCCTCT	8429	False	NA	-4	True	AATAAA	-24	NA	79339767	79302055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79339690
m54284U_201203_174622/57281000/ccs	chrX	+	2951	8	NIC	ENSMUSG00000047757.18	novel	2395	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_5	7.51596939312337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTTTTCTTTTACTGG	NA	False	NA	NA	False	ATTAAA	-20	NA	163763707	163780268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163779118_163779765
m54284U_201203_174622/57345058/ccs	chr2	+	1124	9	NIC	ENSMUSG00000026921.21	novel	1163	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_8	104.879692982007	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCAATGGGGGAAT	181	False	NA	13	True	AATAAA	-13	NA	26476650	26482694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482262_26482429
m54284U_201203_174622/57410281/ccs	chr12	+	2719	7	NNC	ENSMUSG00000037669.16	novel	2737	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	85.2010693725274	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGTGTGTGGTCTGATC	NA	False	NA	18	True	AATAAA	-18	NA	8258133	8335759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_8258205_8270599_8270756_8277219_8277364_8288445_8288616_8318363_8318599_8325807_8325891_8333899
m54284U_201203_174622/57475624/ccs	chr11	+	5465	15	NIC	ENSMUSG00000034940.16	novel	3990	23	NA	NA	0	20793	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	19.5830257610816	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGTGTGGGGATGTGTG	1432	False	NA	8	True	AATAAA	-19	NA	83855253	83902906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83876074_83876378_83877639_83877874_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443
m54284U_201203_174622/57477111/ccs	chr14	+	2975	14	NNC	ENSMUSG00000079184.11	novel	2939	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_3	214.971059012644	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTACTAGTCGTTGTGA	1778	False	NA	32	True	ATTAAA	-18	NA	56905704	56934887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_56906022_56909861_56910018_56911347_56912233_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
m54284U_201203_174622/57540803/ccs	chr17	+	1245	9	NIC	ENSMUSG00000034729.17	novel	1018	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	774.837634201515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGGTTTTGTTTACT	7148	False	NA	7	True	NA	NA	NA	47679822	47689606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_47679880_47680953_47681084_47681188_47681296_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
m54284U_201203_174622/57738311/ccs	chr5	-	3599	20	NNC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	0	-86	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_17	152.222846556785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCTTTTACAAGTCATG	NA	False	NA	-20	True	NA	NA	NA	31337255	31313950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331293_31331410_31331434_31331575_31331840_31337227
m54284U_201203_174622/57739591/ccs	chr5	+	1833	8	NIC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_2	1187.0615409661	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	756	False	NA	15	True	ATTAAA	-18	NA	77099623	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_77099683_77104392_77104591_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201203_174622/57805228/ccs	chr1	+	2180	13	NIC	ENSMUSG00000033793.13	novel	1811	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	186.594182355423	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATAATTAAAGGATTCT	NA	False	NA	-12	True	NA	NA	NA	5153354	5232642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_5153849_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
m54284U_201203_174622/57805370/ccs	chr4	-	2908	4	NIC	ENSMUSG00000003032.9	novel	3029	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	560.618111254593	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACAATCTCTTTGTTTTTT	9	True	NA	-7	True	AATAAA	-21	NA	55532466	55527142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_55528301_55529717_55529883_55529998_55530984_55531866
m54284U_201203_174622/57805590/ccs	chr8	-	2793	9	ISM	ENSMUSG00000053693.17	ENSMUST00000109741.9	4872	26	18539	3	5300	0	3prime_fragment	FALSE	canonical	1	2	junction_8	3.38193731461717	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTTGGGGTTCACACC	NA	False	NA	-2	True	AATAAA	-17	NA	85645443	85638534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_85639871_85639948_85640137_85642083_85642221_85642308_85642432_85642784_85643015_85643181_85643389_85644355_85644604_85644681_85644861_85645298
m54284U_201203_174622/57868584/ccs	chr1	-	158	1	Intergenic	novelGene_345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATAAATAAAAT	5877	False	NA	NA	False	NA	NA	NA	135807284	135807126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_135807100_135807300
m54284U_201203_174622/57869984/ccs	chr5	+	2378	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	48.6269101310055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	NA	False	NA	17	True	AATAAA	-20	NA	37204775	37282643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_37204890_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
m54284U_201203_174622/57870334/ccs	chr12	+	5944	20	NIC	ENSMUSG00000020594.15	novel	3295	20	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	41.7348177646724	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGCCTGATTACATCA	NA	False	NA	38	True	GATAAA	-22	NA	8724358	8802581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8769002_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
m54284U_201203_174622/58000392/ccs	chr19	-	3070	18	NIC	ENSMUSG00000001750.17	novel	2688	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	39	junction_11	8.75502821418308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTCCTCTCTG	NA	False	NA	0	True	AATAAA	-20	NA	3957040	3946049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952557_3952630_3952725_3952881_3952965_3953045_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
m54284U_201203_174622/58000733/ccs	chr9	+	4530	27	NIC	ENSMUSG00000006676.17	novel	4517	27	NA	NA	100	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_6	73.4425368095203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGGCTCCCTCCCC	NA	False	NA	31	True	AATAAA	-35	NA	108367900	108379536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108370913_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
m54284U_201203_174622/58001631/ccs	chr10	+	91	1	Intergenic	novelGene_5189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATTCTATTTATAAAC	NA	False	NA	NA	False	NA	NA	NA	8654323	8654414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_8654300_8654400
m54284U_201203_174622/58065025/ccs	chr2	+	3774	21	NIC	ENSMUSG00000026790.20	novel	3959	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	38	junction_5	293.822271960449	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGACTCCTTTGATTTC	7193	False	NA	14	True	AATAAA	-14	NA	29779796	29821758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783525_29791088_29791260_29792198_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
m54284U_201203_174622/58066173/ccs	chr11	+	5016	16	NNC	ENSMUSG00000020463.16	novel	5125	16	NA	NA	88	0	intron_retention	FALSE	canonical	3	28	junction_13	76.4560585492666	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACGTGTTTTAATCACTA	NA	False	NA	23	True	AATAAA	-35	NA	29122977	29170797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161627_29161792_29163593_29163797_29168455
m54284U_201203_174622/58067482/ccs	chr19	+	5109	27	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	166	junction_4	641.523782344512	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	630	False	NA	56	True	AATAAA	-16	NA	10582950	10607183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10587155_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
m54284U_201203_174622/58131124/ccs	chr1	+	3922	10	NIC	ENSMUSG00000036707.17	novel	3805	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	161.294072357845	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATGTCCTTTAGAC	NA	False	NA	15	True	AATAAA	-16	NA	85721161	85779297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_85721543_85723077_85723195_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
m54284U_201203_174622/58131674/ccs	chr3	+	4816	30	NNC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_13	92.4366158128103	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808254	35910425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863666_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
m54284U_201203_174622/58131914/ccs	chr7	-	5537	1	Antisense	novelGene_ENSMUSG00000030965.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAACACTAACAAA	NA	False	NA	NA	False	NA	NA	NA	132469613	132464076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_132464100_132469600
m54284U_201203_174622/58133141/ccs	chr11	-	3486	18	NIC	ENSMUSG00000020806.16	novel	3593	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	29.3256386048927	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTTTTGCCTTAGAC	NA	False	NA	-15	True	ATTAAA	-19	NA	116515073	116488990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116490265_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494680_116494757_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053_116498254_116501129_116501306_116515003
m54284U_201203_174622/58196736/ccs	chr5	-	1324	12	NIC	ENSMUSG00000005378.18	novel	1516	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	298.632475414013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTCCCTGGCCCTGCA	NA	False	NA	-1	True	ATTAAA	-16	NA	135092944	135081810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092701_135092776_135092867
m54284U_201203_174622/58196982/ccs	chr6	-	9048	32	NIC	ENSMUSG00000051586.18	novel	9204	32	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	22.5366853202445	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAATGAAAAATGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	121087108	120908682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120930594_120930646_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121086976
m54284U_201203_174622/58197337/ccs	chr17	-	4499	4	NNC	ENSMUSG00000066057.8	novel	1909	5	NA	NA	0	18317	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	11.5854314646552	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCCATTGCTATCATCTT	NA	False	NA	-3	True	AATAAA	-19	NA	95142226	95122168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_95126373_95127763_95127825_95128042_95128170_95142119
m54284U_201203_174622/58197463/ccs	chr16	-	1079	5	NIC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	644	combination_of_known_splicesites	FALSE	canonical	3	87	junction_1	2606.84776118591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAAATGCCTGATTA	NA	False	NA	-13	True	AATAAA	-17	NA	95928929	95922789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_95923618_95928352_95928404_95928510_95928541_95928631_95928662_95928789
m54284U_201203_174622/58197840/ccs	chr1	-	3800	5	NIC	ENSMUSG00000026576.13	novel	2580	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1015	junction_4	108.729020964966	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACGTGTGTGACTCGATT	NA	False	NA	-16	True	AATAAA	-16	NA	164285591	164264677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_164266109_164266867_164266952_164269025_164270920_164281057_164281187_164285329
m54284U_201203_174622/58328657/ccs	chr16	+	3305	18	NIC	ENSMUSG00000005899.15	novel	4532	19	NA	NA	0	154	intron_retention	FALSE	canonical	3	223	junction_5	25.2659213567786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGGCTGAATCTTTA	NA	False	NA	6	True	AATAAA	-19	NA	17437223	17461365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459694_17460032_17460162_17460337
m54284U_201203_174622/5832981/ccs	chr14	+	2135	15	NIC	ENSMUSG00000022106.15	novel	3573	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_9	6.89720440261332	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCCATTGACGAAC	NA	False	NA	NA	False	NA	NA	NA	73380431	73420122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
m54284U_201203_174622/5834090/ccs	chr10	+	1124	7	NNC	ENSMUSG00000006728.13	novel	2053	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	97	junction_3	2431.00916973452	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTTTTTTC	NA	False	NA	29	True	AAAACA	-27	NA	126899471	126903166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_126899629_126900453_126900590_126900703_126900869_126901023_126901134_126901821_126901873_126901969_126902106_126902797
m54284U_201203_174622/5834573/ccs	chr9	-	4338	21	NIC	ENSMUSG00000032468.12	novel	4647	22	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_20	65.4877660330538	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTTCCAAGTGACTG	NA	False	NA	6	True	AATAAA	-35	NA	99450720	99360424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99450654
m54284U_201203_174622/5834758/ccs	chr2	-	3438	5	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_4	107.185295166828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26277684_26279160
m54284U_201203_174622/5834858/ccs	chr10	+	3698	24	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	29.4981336117804	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	1778	False	NA	8	True	AATAAA	-20	NA	45453924	45588367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548647_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
m54284U_201203_174622/58458208/ccs	chr3	-	1843	9	NIC	ENSMUSG00000027752.16	novel	1300	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1645	junction_8	201.288932569578	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTCTAGTCCTTACGT	NA	False	NA	-16	True	AATAAA	-23	NA	54642467	54636102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
m54284U_201203_174622/58460375/ccs	chr11	-	199	1	Intergenic	novelGene_5939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAACAAAAAGCTCTACGA	7114	False	NA	NA	False	NA	NA	NA	68966738	68966539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68966500_68966700
m54284U_201203_174622/58460891/ccs	chrX	+	4186	12	NNC	ENSMUSG00000044150.13	novel	3366	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_9	183.348874873437	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGAGAGCATTCTTTG	NA	False	NA	23	True	AATAAA	-36	NA	158315663	158376077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340441_158340554_158341330_158341395_158342833_158342950_158349423_158350362_158350914_158351011_158357940_158358094_158375066
m54284U_201203_174622/58525079/ccs	chr7	+	2285	14	NIC	ENSMUSG00000030505.18	novel	2507	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	164.362422460731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAATGTTTTCATGAA	NA	False	NA	44	True	AATAAA	-28	NA	49428093	49508013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
m54284U_201203_174622/58526359/ccs	chr3	+	2802	11	NNC	ENSMUSG00000036503.14	novel	2678	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	55.1311164407179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTTGTTGAGTTTT	NA	False	NA	NA	False	AAGAAA	-42	NA	57643502	57742652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_57643622_57655311_57655456_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
m54284U_201203_174622/58720268/ccs	chr16	-	2020	4	NNC	ENSMUSG00000022749.9	novel	3690	18	NA	NA	3684	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	80.5536398239638	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCCTGGAGGATGTC	NA	False	NA	-4	True	AATAAA	-22	NA	56994935	56989224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_56990804_56991985_56992181_56993386_56993523_56994825
m54284U_201203_174622/58720937/ccs	chr2	-	6275	15	NIC	ENSMUSG00000027340.16	novel	6364	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_10	41.8786512267459	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTGTCATTTGCCTC	7599	False	NA	-1	True	AATAAA	-17	NA	131987028	131894415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
m54284U_201203_174622/58721719/ccs	chr8	+	3960	13	NIC	ENSMUSG00000031483.9	novel	4838	12	NA	NA	0	-905	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	118.668627090548	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAGGTAAAATTTACC	NA	False	NA	21	True	AATAAA	-18	NA	27513893	27529451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_27513935_27514861_27514956_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
m54284U_201203_174622/58721748/ccs	chr11	-	5456	14	NNC	ENSMUSG00000020173.18	novel	5615	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	125	junction_3	110.433304726878	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGTGTGGACTTCATGC	NA	False	NA	-1	True	AATAAA	-20	NA	12414960	12186675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
m54284U_201203_174622/58722139/ccs	chr1	-	2381	3	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	5.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTCTTTGGATTTT	NA	False	NA	NA	False	CATAAA	-11	NA	11465716	11454293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_11456468_11457012_11457110_11465606
m54284U_201203_174622/58787659/ccs	chr6	-	7549	20	NNC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	782	intron_retention	TRUE	canonical	3	80	junction_1	16.6688456562674	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGAGCTGTGTTTTAAA	NA	False	NA	-26	True	ATTAAA	-32	NA	119825128	119548808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_119550062_119550086_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
m54284U_201203_174622/58787995/ccs	chr6	+	193	1	Intergenic	novelGene_3144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAAAAAGTTGTACTAAC	NA	False	NA	NA	False	NA	NA	NA	29999380	29999573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29999400_29999600
m54284U_201203_174622/58917935/ccs	chr7	-	178	1	Intergenic	novelGene_3984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTTAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	101156057	101155879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_101155900_101156100
m54284U_201203_174622/58919254/ccs	chr9	+	3413	19	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	202.934855447642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	5879	False	NA	20	True	AATAAA	-30	NA	21336240	21418436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21336553_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
m54284U_201203_174622/58919659/ccs	chr10	+	2945	15	NIC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	36.5510545926754	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	24	True	AATAAA	-17	NA	23672883	23703866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23680935_23681044_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
m54284U_201203_174622/58983388/ccs	chr6	-	2321	8	NIC	ENSMUSG00000030346.17	novel	1871	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	195	junction_2	26.1635359277927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATGCCTCGCCTAGTT	5265	False	NA	-5	True	AATAAA	-21	NA	126916550	126900377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
m54284U_201203_174622/5898631/ccs	chr9	+	4090	17	NIC	ENSMUSG00000037784.15	novel	4350	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	5.26634360823522	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTCGTTCTTTGTTATT	NA	False	NA	NA	False	AATATA	-21	NA	99511594	99551309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_99511723_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
m54284U_201203_174622/5900424/ccs	chr10	+	5629	17	NIC	ENSMUSG00000019977.17	novel	2793	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	828	junction_14	100.045595074196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTTATTTCTTAGACA	NA	False	NA	27	True	AATAAA	-29	NA	21171916	21244797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21243686_21244187
m54284U_201203_174622/59048723/ccs	chr15	-	1159	8	NIC	ENSMUSG00000022552.17	novel	1734	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	47.1584389833563	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGTGTTCTGTTCTTGG	8512	False	NA	-4	True	ATTAAA	-15	NA	76234912	76231240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234680
m54284U_201203_174622/59049475/ccs	chr16	-	3090	7	NNC	ENSMUSG00000013089.16	novel	3773	13	NA	NA	-828	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_6	376.188080914617	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACGCATTCCTGCAACCTG	NA	False	NA	-20	True	AATAAA	-15	NA	22221407	22200065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22221354
m54284U_201203_174622/59050025/ccs	chr17	+	3735	24	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_4	203.108517653222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
m54284U_201203_174622/590755/ccs	chr6	+	2564	14	NIC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_5	436.803951799537	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201203_174622/59114633/ccs	chr11	-	2775	15	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_9	74.1306073007331	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860799	70833902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835565_70835670_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
m54284U_201203_174622/59116031/ccs	chr17	-	1754	7	NIC	ENSMUSG00000024091.10	novel	3369	6	NA	NA	0	355	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	1604.61529657423	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCTCGATAGCTTGTTT	2963	False	NA	-17	True	AATAAA	-14	NA	65920550	65887059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_65887843_65889574_65889749_65894038_65894162_65899285_65899367_65900434_65900539_65901896_65902050_65920214
m54284U_201203_174622/59116047/ccs	chr7	-	6471	32	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_21	43.133097499437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGTATTGACTTTCT	10001	False	NA	-6	True	AATAAA	-20	NA	101859352	101768604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
m54284U_201203_174622/59179360/ccs	chr4	-	4079	19	ISM	ENSMUSG00000028649.22	ENSMUST00000134458.8	14463	70	119458	4	-8092	0	3prime_fragment	FALSE	canonical	3	50	junction_4	55.2549645833848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTTTTGTAATTCTTG	NA	False	NA	-12	True	ATTAAA	-14	NA	123274252	123243512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207
m54284U_201203_174622/59181491/ccs	chr9	+	4299	6	NIC	ENSMUSG00000032594.12	novel	4559	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	111.90781920849	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCAAGTCTGTGTGA	6853	False	NA	17	True	AATAAA	-17	NA	107879832	107925981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107880022_107901301_107901523_107909197_107909409_107918103_107918286_107921923_107922100_107922661
m54284U_201203_174622/59181884/ccs	chr7	+	2083	7	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	293.703743402921	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43896248_43896674_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/59246913/ccs	chr11	-	4181	24	NIC	ENSMUSG00000001441.14	novel	4215	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_20	94.9781389631707	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGGCCTGGTTCTTTC	NA	False	NA	0	True	AATAAA	-15	NA	97171312	97096667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97141453_97141570_97149099_97149178_97158420_97158506_97171026
m54284U_201203_174622/59310173/ccs	chr6	-	4054	1	Antisense	novelGene_ENSMUSG00000055403.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	89077770	89073716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_89073700_89077800
m54284U_201203_174622/59311414/ccs	chr1	+	1464	4	NNC	ENSMUSG00000100908.2	novel	316	2	NA	NA	0	9689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.657891697365	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCGAGTGACAATGTCTC	NA	False	NA	9	True	ATTAAA	-23	NA	88387404	88402969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_88387678_88397558_88397777_88398642_88398830_88402183
m54284U_201203_174622/59376526/ccs	chr10	+	5275	7	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_4	46.4521856919086	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_12966765_12981598_12981638_12988262_12988295_12989901_12989965_12992439_12992526_13000599_13000913_13002885
m54284U_201203_174622/59376656/ccs	chr3	+	2167	6	NIC	ENSMUSG00000004897.17	novel	933	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	1161.46021886245	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87814156	87823439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87814473_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
m54284U_201203_174622/59377803/ccs	chr17	+	7171	16	NIC	ENSMUSG00000061607.16	novel	7335	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	32.7234879966465	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCCTGCAGTGAATTA	9390	False	NA	15	True	NA	NA	NA	36152567	36170562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159683_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
m54284U_201203_174622/59441973/ccs	chr5	-	2315	8	NIC	ENSMUSG00000045302.14	novel	1869	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	234	junction_6	22.518926280272	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAGCAGTCCTCTTGTC	NA	False	NA	-8	True	AATAAA	-21	NA	31117624	31112386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116757_31117314
m54284U_201203_174622/59508894/ccs	chr19	-	2745	8	NIC	ENSMUSG00000040018.10	novel	4798	9	NA	NA	0	-1866	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	140.673743253019	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTCAGCTAACCCAG	NA	False	NA	-14	True	AATAAA	-18	NA	43741439	43723558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43737228_43737352_43739782_43739974_43741260
m54284U_201203_174622/59509145/ccs	chr11	+	3539	26	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_25	162.280576779848	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6809	False	NA	40	True	AATAAA	-25	NA	115714883	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746294
m54284U_201203_174622/59573428/ccs	chr2	-	3518	17	NIC	ENSMUSG00000074643.13	novel	3492	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_15	70.9506595723394	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGTGGCCGCTCTTGTTG	NA	False	NA	-3	True	AATAAA	-18	NA	155953855	155913764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945350_155953705
m54284U_201203_174622/59574710/ccs	chr2	-	1973	5	NIC	ENSMUSG00000027551.16	novel	2848	9	NA	NA	95	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	9.69535971483266	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATGTGAGCGTCATTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	168754458	168735250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168754153
m54284U_201203_174622/59575088/ccs	chr12	+	6459	28	NIC	ENSMUSG00000042029.8	novel	4684	29	NA	NA	0	-199	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	49.3771077062245	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTGCCAAGAATAATAT	NA	False	NA	16	True	AATAAA	-21	NA	116369021	116427152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_116369112_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
m54284U_201203_174622/59638222/ccs	chr12	-	3540	12	NIC	ENSMUSG00000021224.16	novel	3468	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_8	18.4936888944748	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	NA	False	NA	-37	True	AATAAA	-14	NA	83968641	83840844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83923441_83923587_83968591
m54284U_201203_174622/5964079/ccs	chr10	+	2845	12	NIC	ENSMUSG00000020212.15	novel	3074	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	32.0750669111597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGATGCTTCTGTTTTC	NA	False	NA	11	True	ATTAAA	-14	NA	117977715	118004902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_117977868_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
m54284U_201203_174622/59706075/ccs	chr15	+	1442	12	NIC	ENSMUSG00000046434.17	novel	3118	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	551	junction_10	5655.9318411501	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTTCTTGTCTTCCT	NA	False	NA	13	True	AATAAA	-13	NA	103148858	103155119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103154772_103154849_103154971
m54284U_201203_174622/59706080/ccs	chrX	+	2419	8	NIC	ENSMUSG00000009995.18	novel	1851	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	70	junction_6	63.5295206970744	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTCTGTGTAGGA	NA	False	NA	10	True	AATAAA	-23	NA	73326355	73333757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73332120_73332267_73332789_73332904
m54284U_201203_174622/59769781/ccs	chrX	-	173	1	Intergenic	novelGene_9508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAACATTTCCCAAAAAA	8263	False	NA	NA	False	NA	NA	NA	73393454	73393281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_73393300_73393500
m54284U_201203_174622/59770284/ccs	chrX	+	3571	16	NIC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	49	junction_5	30.6328799386106	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCCATTGACCTTGA	NA	False	NA	7	True	AATAAA	-18	NA	158197567	158281753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275319_158275408_158275893_158276081_158279030_158279306_158280579
m54284U_201203_174622/59771585/ccs	chr7	+	3079	22	NIC	ENSMUSG00000030534.14	novel	2574	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_6	28.1672201370571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	79919396	79941327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929782_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
m54284U_201203_174622/59834737/ccs	chr11	+	3273	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	110	0	at_least_one_novel_splicesite	FALSE	canonical	2	31	junction_1	231.791333363054	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697437	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97697469_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201203_174622/59836197/ccs	chr3	-	3220	8	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	-146	11914	0	0	5prime_fragment	FALSE	canonical	3	55	junction_5	20.2957721544892	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAGTGTCATGAATTG	10010	False	NA	-4	True	ATTAAA	-15	NA	95726090	95679566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95694595_95694697_95697411_95697542_95725858
m54284U_201203_174622/59900251/ccs	chr10	-	5551	29	NNC	ENSMUSG00000074657.6	novel	6295	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	8.8746227283997	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTGTTGCTTCTTATT	NA	False	NA	0	True	AATAAA	-16	NA	127098964	127061564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_127063800_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127083391_127083497_127083898_127083973_127084060_127084149_127098636
m54284U_201203_174622/59965780/ccs	chr13	+	3842	7	NIC	ENSMUSG00000021326.14	novel	2046	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	719	junction_5	31.8799832705937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTTTGTTTTTGTTAT	1222	False	NA	21	True	AATAAA	-23	NA	21364393	21377033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21374141_21374261_21374295_21375389_21375417_21376199
m54284U_201203_174622/59967307/ccs	chr2	+	1455	10	NIC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_8	77.9635875755748	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5681	False	NA	19	True	AATAAA	-21	NA	22785606	22830278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22825570_22825652_22829834
m54284U_201203_174622/59968189/ccs	chr2	+	2824	18	NIC	ENSMUSG00000026775.10	novel	4707	19	NA	NA	0	-1635	combination_of_known_splicesites	FALSE	canonical	3	33	junction_3	187.259104767536	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCATTTTTTCAAATATT	7222	False	NA	22	True	ATTAAA	-14	NA	23046529	23087637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_23046744_23050203_23050336_23052512_23052676_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
m54284U_201203_174622/60033807/ccs	chr12	+	4347	21	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	165.091270211359	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3986	False	NA	13	True	AATAAA	-13	NA	83679030	83729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_83679192_83685901_83685966_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
m54284U_201203_174622/60098839/ccs	chr6	-	1765	10	NIC	ENSMUSG00000048930.13	novel	1708	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_9	97.0713114476818	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAAAAAAACCACCCGC	NA	False	NA	18	True	AATAAA	-36	NA	113354337	113343615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
m54284U_201203_174622/60164697/ccs	chr10	+	2427	8	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	95	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_5	59.2982774984714	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5564	False	NA	16	True	AATAGA	-15	NA	81157031	81162076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160702_81160823_81160923_81161211_81161297
m54284U_201203_174622/60228346/ccs	chr4	+	3817	5	NNC	ENSMUSG00000078773.12	novel	2403	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	99.0075754677388	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATATATTGAATTTAT	-25	True	NA	NA	False	AATAAA	-9	NA	11558921	11585744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_11559014_11563326_11563478_11569820_11569933_11578713_11580108_11583676
m54284U_201203_174622/6029438/ccs	chr16	+	2116	13	ISM	ENSMUSG00000022702.17	ENSMUST00000004222.14	4218	25	204	42298	0	0	5prime_fragment	FALSE	canonical	3	103	junction_2	13.4109718762909	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTGCTGATTATCCAGA	NA	False	NA	7	True	AATAAA	-16	NA	18696019	18746761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187
m54284U_201203_174622/60294851/ccs	chr4	-	7895	34	NIC	ENSMUSG00000041936.19	novel	6891	36	NA	NA	0	0	intron_retention	FALSE	canonical	3	186	junction_30	92.1086713952012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156281945	156249746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156279700_156279963_156281670
m54284U_201203_174622/60295115/ccs	chrX	+	797	5	NIC	ENSMUSG00000031158.12	novel	2381	6	NA	NA	0	-103	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	379.892748022386	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTCTGCCTTCAGT	1189	False	NA	31	True	TTTAAA	-18	NA	7765595	7773106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7765709_7769911_7769976_7772309_7772439_7772519_7772631_7772726
m54284U_201203_174622/60295228/ccs	chr6	-	153	1	Intergenic	novelGene_3182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATATAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	37534015	37533862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_37533900_37534000
m54284U_201203_174622/6030975/ccs	chr9	+	4468	18	NNC	ENSMUSG00000032193.10	novel	4627	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	77.0051452017542	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCATCCTTATGTGTG	1929	False	NA	16	True	ATTAAA	-15	NA	21634934	21661215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_21635141_21643045_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
m54284U_201203_174622/60360514/ccs	chr11	-	2797	5	NIC	ENSMUSG00000057113.14	novel	1192	10	NA	NA	0	1781	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8584.47792530216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAATGTTGTTGGCTAC	NA	False	NA	NA	False	ATTAAA	-19	NA	33113077	33100505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_33102853_33110827_33110922_33111105_33111226_33111547_33111628_33112921
m54284U_201203_174622/60360810/ccs	chr4	+	2747	4	NIC	ENSMUSG00000065999.14	novel	2762	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	33.2498955721	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	147637733	147669655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_147637884_147661481_147661587_147665698_147665826_147667290
m54284U_201203_174622/60490916/ccs	chrX	+	3249	22	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	156	junction_8	43.2155384837434	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTTCCGAATTTTTTTT	NA	False	NA	6	True	AATAAA	-17	NA	133208903	133263388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_133208978_133209314_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
m54284U_201203_174622/60491349/ccs	chr14	-	2622	9	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	157	junction_8	1603.03828225498	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	8725	False	NA	42	True	AATAAA	-18	NA	52341485	52312255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52334778_52336002_52341345
m54284U_201203_174622/60556945/ccs	chr2	-	6617	33	NIC	ENSMUSG00000026980.16	novel	5172	35	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_17	114.622814694272	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213575	60122446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
m54284U_201203_174622/60688094/ccs	chr14	-	2170	21	NIC	ENSMUSG00000040760.12	novel	7642	22	NA	NA	0	-4556	combination_of_known_splicesites	FALSE	canonical	2	8	junction_11	76.9144167240447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGCTTTCCTAAACAAGA	NA	False	NA	-1	True	AATAAA	-22	NA	26692462	26645500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
m54284U_201203_174622/60688823/ccs	chr5	+	2896	17	NIC	ENSMUSG00000034573.15	novel	3439	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	12.8403660383963	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATGCGTTTGTTTTCCT	NA	False	NA	NA	False	AGTAAA	-18	NA	103573057	103689300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837
m54284U_201203_174622/60753733/ccs	chr5	-	3131	8	NNC	ENSMUSG00000029328.16	novel	2149	9	NA	NA	-242	0	intron_retention	FALSE	canonical	2	24	junction_6	463.772991618854	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCGTCAGGTACTGCA	NA	False	NA	-14	True	AATAAA	-21	NA	100187765	100182579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_100182844_100183493_100183599_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185072_100185426_100185589_100185671
m54284U_201203_174622/60819774/ccs	chr4	+	4679	1	Intergenic	novelGene_2337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTCTCCAACTGCTTG	1952	False	NA	NA	False	NA	NA	NA	146253996	146258675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_146254000_146258700
m54284U_201203_174622/60820224/ccs	chr15	-	6298	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	0	0	intron_retention	FALSE	canonical	3	242	junction_22	71.9735962251656	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199514	89172485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
m54284U_201203_174622/60883066/ccs	chr11	+	5108	17	NIC	ENSMUSG00000020817.17	novel	5408	18	NA	NA	0	-195	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	40.6215383140521	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTCCTTTGCAT	NA	False	NA	22	True	ATTAAA	-23	NA	70735603	70833736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
m54284U_201203_174622/60950848/ccs	chr11	+	4423	24	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	intron_retention	FALSE	canonical	3	2360	junction_7	199.672188816489	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332202	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
m54284U_201203_174622/6096191/ccs	chr7	+	4149	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	259	junction_5	49.1277309736292	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTCCATTTGGTC	NA	False	NA	21	True	AATAAA	-22	NA	127187938	127202766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196715_127199477_127199619_127199696_127199799_127201638
m54284U_201203_174622/6097033/ccs	chr7	+	1331	2	NNC	ENSMUSG00000074071.12	novel	454	5	NA	NA	0	4951	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCAACAATGTTTCTC	NA	False	NA	NA	False	ACTAAA	-42	NA	67925742	67934691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_67925790_67933407
m54284U_201203_174622/6097487/ccs	chr13	+	3050	5	NIC	ENSMUSG00000021504.15	novel	2130	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	87	junction_3	9.49670995661129	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTGGCAAGGAACTGGA	NA	False	NA	6	True	AATAAA	-19	NA	55747877	55758256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_55748006_55751832_55752196_55755009_55756239_55756510_55756616_55757031
m54284U_201203_174622/61014195/ccs	chr10	-	2883	13	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	0	225	intron_retention	FALSE	canonical	3	644	junction_8	53.2960807397901	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214297	81202706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
m54284U_201203_174622/61014424/ccs	chr2	-	4123	16	NIC	ENSMUSG00000075415.14	novel	4726	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_7	27.5474540061731	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTTTTTTTTTTTCTAT	4768	False	NA	-1	True	AATAAA	-16	NA	31032020	30916806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30942996_30943180_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
m54284U_201203_174622/61079757/ccs	chr5	+	6269	10	NIC	ENSMUSG00000039782.16	novel	7050	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_2	4.92160768674447	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTGTAATCTTATTCT	NA	False	NA	NA	False	AATAAA	-18	NA	43391269	43447067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
m54284U_201203_174622/61079923/ccs	chr13	+	5497	18	NIC	ENSMUSG00000038518.16	novel	456	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	195.130441688006	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTTGTGGGAAGGG	NA	False	NA	16	True	AATAAA	-18	NA	44887515	45075119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_44887662_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
m54284U_201203_174622/61081974/ccs	chr9	-	3083	22	NNC	ENSMUSG00000032254.11	novel	3398	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	64.8232902351932	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGGTGGCCATT	NA	False	NA	-3	True	AATAAA	-18	NA	61854056	61824561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_61824962_61826181_61826253_61826893_61826973_61827156_61827240_61828300_61828529_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
m54284U_201203_174622/61211186/ccs	chr8	+	2928	18	NIC	ENSMUSG00000031753.17	novel	2737	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	332	junction_8	32.4382831625361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTGTGTTGGGTCCAG	9633	False	NA	13	True	AATAAA	-18	NA	111573670	111608859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607609_111608002_111608132_111608362
m54284U_201203_174622/61278508/ccs	chr13	-	1207	8	NNC	ENSMUSG00000021484.9	novel	4315	8	NA	NA	0	-149	at_least_one_novel_splicesite	FALSE	canonical	3	138	junction_3	802.618647850616	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTTGCCCAGCTGAGA	3011	False	NA	-3	True	ATTAAA	-17	NA	55510424	55494554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_55494851_55496127_55496248_55498968_55499084_55499219_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
m54284U_201203_174622/61342054/ccs	chr10	+	4931	6	NIC	ENSMUSG00000019992.9	novel	1991	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_5	11.0887330205033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTGAGTATTTAACAT	NA	False	NA	7	True	AATAAA	-14	NA	20223564	20237050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20233513_20236280
m54284U_201203_174622/61344271/ccs	chr17	-	2361	16	NIC	ENSMUSG00000063011.8	novel	2044	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_15	10.4690018626419	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCCTGTAGTGTTCCTA	6591	False	NA	-2	True	AATAAA	-22	NA	25973352	25967586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972399_25972747_25972792_25973105_25973197_25973316
m54284U_201203_174622/61408465/ccs	chr10	+	4202	26	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_14	55.4173113746959	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGCTGTTTGTTTCACTG	NA	False	NA	20	True	TATAAA	-36	NA	127216530	127335252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
m54284U_201203_174622/61408713/ccs	chr19	-	177	1	Intergenic	novelGene_9323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46989269	46989092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_46989100_46989300
m54284U_201203_174622/61409659/ccs	chr7	+	5526	1	FSM	ENSMUSG00000045411.17	ENSMUST00000144905.3	1966	1	0	-3560	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	False	NA	17	True	ATTAAA	-17	NA	43896210	43901736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_43896200_43901700
m54284U_201203_174622/61473294/ccs	chr8	+	2323	14	NIC	ENSMUSG00000025316.17	novel	5444	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_9	50.3807984461442	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGCTCAGTGTTGTTG	NA	False	NA	7	True	AATAAA	-15	NA	122677313	122752916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
m54284U_201203_174622/61473533/ccs	chrX	+	2492	14	NIC	ENSMUSG00000031403.15	novel	2804	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_5	713.258221081838	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATTTGCTTTTCCTT	NA	False	NA	34	True	ATTAAA	-21	NA	74139706	74153383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
m54284U_201203_174622/61475186/ccs	chr7	+	228	1	Intergenic	novelGene_4085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAGGTA	NA	False	NA	NA	False	ATTAAA	-22	NA	126076352	126076580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_126076400_126076600
m54284U_201203_174622/61475419/ccs	chr9	+	4498	15	ISM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	22	10389	0	0	5prime_fragment	FALSE	canonical	3	209	junction_1	22.8924949826491	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGGTCCTAGTTTTAC	NA	False	NA	9	True	ATTAAA	-19	NA	121126599	121291676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
m54284U_201203_174622/61540484/ccs	chr19	-	4530	20	NNC	ENSMUSG00000024642.18	novel	4545	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_8	43.8430214095218	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGATTATTTTCTAATT	NA	False	NA	-16	True	ATTAAA	-15	NA	14575415	14425513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_14427206_14429006_14429084_14429427_14429579_14429783_14429932_14430942_14431191_14432104_14432355_14441672_14441750_14442107_14442302_14442664_14442783_14443912_14444066_14444543_14444598_14445515_14445636_14493722_14493740_14495135_14495338_14522151_14522227_14541752_14541816_14571747_14571793_14572953_14573018_14574120_14574219_14574731
m54284U_201203_174622/61540531/ccs	chr8	+	212	1	Intergenic	novelGene_4434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATACGTGCTTCTGAGCTC	1493	False	NA	NA	False	AATAGA	-10	NA	105862141	105862353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_105862100_105862400
m54284U_201203_174622/61604030/ccs	chr1	+	1628	7	NIC	ENSMUSG00000053332.14	novel	793	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	3576	junction_1	865.328967631514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160865118_160865564_160865608_160865794_160865843_160866026
m54284U_201203_174622/6160763/ccs	chr14	-	2324	6	NIC	ENSMUSG00000021891.9	novel	3946	6	NA	NA	0	793	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	104.286911930501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTGAATGTGTTTGTTT	NA	False	NA	2	True	NA	NA	NA	31216987	31200748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215193_31215922_31216858
m54284U_201203_174622/6162606/ccs	chr1	-	6596	18	NIC	ENSMUSG00000057335.12	novel	6967	20	NA	NA	-77	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_14	19.2076613895436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATGATCATAGATTTCA	NA	False	NA	-9	True	AATAAA	-18	NA	176641710	176561227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610118_176616032_176616112_176620101_176620192_176621070_176621216_176641461
m54284U_201203_174622/61671630/ccs	chr17	+	2100	7	NIC	ENSMUSG00000073468.13	novel	1049	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	730	junction_4	51.8609251320834	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTCTGGATCAACTGTA	2990	False	NA	NA	False	AATAAA	-19	NA	8530000	8546274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8540668_8542108_8542168_8543265_8543296_8545786
m54284U_201203_174622/61671985/ccs	chr1	+	1478	12	NIC	ENSMUSG00000018189.13	novel	1696	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	455.061706831934	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTCCATTCTTCAATTC	NA	False	NA	25	True	NA	NA	NA	143653013	143682679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143678665_143678816_143682421
m54284U_201203_174622/61735938/ccs	chr2	+	1441	4	NIC	ENSMUSG00000032966.15	novel	783	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	77	junction_2	964.4585124422	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384504	151403610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_151384665_151384737_151384786_151401377_151401541_151402540
m54284U_201203_174622/61800714/ccs	chr10	+	4154	25	NIC	ENSMUSG00000025404.16	novel	4281	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_14	65.118908331008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGCTGTTTGTTTCACTG	NA	False	NA	20	True	TATAAA	-36	NA	127216530	127335252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
m54284U_201203_174622/61801691/ccs	chr18	+	5526	6	NIC	ENSMUSG00000042439.14	novel	5757	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	33.5952377577537	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATAGTCAAACTTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	65713915	65822514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_65714220_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
m54284U_201203_174622/61802199/ccs	chr6	+	867	7	NNC	ENSMUSG00000029911.15	novel	933	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	22	junction_1	1030.09650303045	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGGTTATATTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	40448348	40457929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_40448631_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
m54284U_201203_174622/61802682/ccs	chr5	+	5675	44	NIC	ENSMUSG00000037426.19	novel	8216	43	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	36.4349068030642	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTCCCTCCCTCCCTCC	2013	False	NA	7	True	AATAAA	-8	NA	33021064	33149005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_33021166_33021353_33021657_33021920_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094891_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
m54284U_201203_174622/61866649/ccs	chr6	+	6848	16	NNC	ENSMUSG00000029787.11	novel	6670	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	24.9411752373905	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGCTATTGATCTCCTA	NA	False	NA	43	True	AATAAA	-21	NA	56691911	56738897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706924_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
m54284U_201203_174622/61866948/ccs	chr7	+	3212	3	NIC	ENSMUSG00000030435.17	novel	904	5	NA	NA	-2179	719	intron_retention	FALSE	canonical	3	1693	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCGTTCTCCCTTCCCC	220	False	NA	NA	False	NA	NA	NA	5068047	5072314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_5069538_5070208_5070647_5071030
m54284U_201203_174622/61867142/ccs	chr4	+	5067	20	NNC	ENSMUSG00000028580.16	novel	5389	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	187.697655745348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130470988_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/61868667/ccs	chr11	-	5586	18	NIC	ENSMUSG00000001440.6	novel	5894	22	NA	NA	5206	-1276	intron_retention	FALSE	canonical	3	859	junction_17	102.866527555612	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCCTCCCTGCCTGAGC	NA	False	NA	NA	False	NA	NA	NA	97073501	97051815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97053508_97054178_97054341_97054739_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450
m54284U_201203_174622/61997112/ccs	chr2	+	4438	13	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_10	196.537245551292	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTGTCTTCTGCGTTGT	2378	False	NA	15	True	ATTAAA	-15	NA	90770802	90849842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90843043_90843188_90843582_90843748_90846910
m54284U_201203_174622/61997222/ccs	chr17	+	4976	29	NIC	ENSMUSG00000098374.2	novel	6521	28	NA	NA	14	0	intron_retention	TRUE	canonical	1	2	junction_7	106.921885228499	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCTCTGTGCTGGGC	NA	False	NA	16	True	ATTAAA	-16	NA	29833863	29922333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
m54284U_201203_174622/61999387/ccs	chr1	+	196	1	Intergenic	novelGene_242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCACTTGTGTGTCTCGTG	NA	False	NA	16	True	NA	NA	NA	89843858	89844054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_89843900_89844100
m54284U_201203_174622/62063434/ccs	chr6	+	4823	13	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	111	junction_6	28.8800200061488	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	287	False	NA	28	True	AATAAA	-16	NA	113284152	113301821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113284531_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
m54284U_201203_174622/62063494/ccs	chr4	+	5692	1	NIC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	0	-12867	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAATAGGAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	107225248	107230940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_107225200_107230900
m54284U_201203_174622/62065496/ccs	chr6	+	797	2	NNC	ENSMUSG00000042460.6	novel	6092	4	NA	NA	0	-28457	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGTTTGCTATGTTAG	9	True	NA	NA	False	AATATA	-24	NA	7844841	7847230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_7845395_7846986
m54284U_201203_174622/62195751/ccs	chr10	+	4738	27	NIC	ENSMUSG00000034453.9	novel	4975	28	NA	NA	77	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_20	43.0505585528919	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTGAGAGGTGATGT	NA	False	NA	22	True	NA	NA	NA	84458233	84563042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
m54284U_201203_174622/62195897/ccs	chr19	+	5352	31	NIC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	66.7043226985078	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAAGGCTCTTAAACT	NA	False	NA	13	True	AATAAA	-24	NA	34899760	34953145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34950258_34950410_34951827_34951971_34952892
m54284U_201203_174622/62260717/ccs	chr14	-	3200	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	0	-373	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	137.085274369567	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGACTTTAAGTAGAAAT	NA	False	NA	-25	True	AATAAA	-15	NA	67953059	67914176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
m54284U_201203_174622/6228431/ccs	chr4	+	3182	4	Intergenic	novelGene_2343	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	59	junction_2	25.74662868977	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTGGTTGTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	146365110	146393561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_146365259_146384326_146384431_146388486_146388614_146390758
m54284U_201203_174622/62325639/ccs	chr8	+	6418	3	Fusion	ENSMUSG00000096401.3_ENSMUSG00000110458.2	novel	930	5	NA	NA	0	-206	intron_retention	FALSE	canonical	1	3	junction_2	330	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGTCTTTTTCTTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	20697984	20727060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr8_+_20698090_20711891_20712265_20721120
m54284U_201203_174622/62391275/ccs	chr11	+	6226	46	NIC	ENSMUSG00000040850.18	novel	6491	47	NA	NA	55	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_27	79.4769009069791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGATTGTTTTTTA	NA	False	NA	17	True	AATAAA	-19	NA	30721780	30830361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
m54284U_201203_174622/62455852/ccs	chr5	-	3531	19	NIC	ENSMUSG00000018974.8	novel	4447	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_12	98.5110290247045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTGTGCATTGCAGCT	NA	False	NA	-16	True	ATTAAA	-16	NA	113909699	113880506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892389_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
m54284U_201203_174622/62455889/ccs	chr17	-	2628	4	NNC	ENSMUSG00000095325.4	novel	5337	4	NA	NA	141	1859	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	76.856287243718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTCCTTTGTCATG	NA	False	NA	-9	True	NA	NA	NA	33110366	33100976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_33103140_33104676_33104738_33104930_33105058_33110089
m54284U_201203_174622/62458620/ccs	chr15	+	1755	10	NNC	ENSMUSG00000046434.17	novel	1918	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	4203.20242989398	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	False	NA	-1	True	AATAAA	-17	NA	103148858	103153382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152055_103152208_103152385_103152456_103152682
m54284U_201203_174622/62522141/ccs	chr16	-	5371	24	NIC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	8.7757183474732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTTTATTTTTTAAAGA	6483	False	NA	NA	False	AATAAA	-15	NA	97653050	97593531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618063_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
m54284U_201203_174622/62522898/ccs	chr7	+	6806	13	NIC	ENSMUSG00000030607.8	novel	7355	17	NA	NA	-10375	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	4.46203117674252	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTTTTTCTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	78739123	78764847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_78739645_78740686_78741092_78742060_78742236_78742426_78742555_78743729_78744024_78746414_78746631_78747499_78750983_78757862_78757977_78761041_78761201_78761702_78761786_78762421_78762567_78763402_78763586_78763947
m54284U_201203_174622/62587373/ccs	chr8	-	2747	1	Intergenic	novelGene_4471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATTGAGTCACCCTGC	NA	False	NA	NA	False	NA	NA	NA	107886969	107884222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107884200_107887000
m54284U_201203_174622/62587742/ccs	chr8	+	2172	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	163.562249235574	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415900	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85415979_85416260_85416538_85417145_85417202_85417401_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201203_174622/62588113/ccs	chr11	-	1429	12	NIC	ENSMUSG00000018677.10	novel	1685	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_11	1375.04181754592	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	8348	False	NA	95	True	NA	NA	NA	102297710	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102297651
m54284U_201203_174622/62588955/ccs	chr2	-	2210	10	NIC	ENSMUSG00000026860.17	novel	1851	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	213	junction_4	53.8401841759365	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	False	NA	-12	True	AATAAA	-14	NA	30249317	30234822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_30235440_30235710_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
m54284U_201203_174622/62589717/ccs	chr4	+	1643	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	1267	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	2252.60811801195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTACTCTCACAT	-24	True	NA	8	True	AATAAA	-20	NA	46452168	46472657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_46452544_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
m54284U_201203_174622/62653279/ccs	chr8	-	4532	4	NIC	ENSMUSG00000037316.10	novel	4876	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	189.520447445652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTTCTCTCTAGCA	NA	False	NA	NA	False	AATAAA	-25	NA	26275226	26254565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_26258438_26259309_26259565_26267450_26267556_26274926
m54284U_201203_174622/62655213/ccs	chr14	+	2753	12	NNC	ENSMUSG00000025555.15	novel	4885	27	NA	NA	10329	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	35.1415085025488	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTGTCTTCTCTTTG	NA	False	NA	35	True	NA	NA	NA	121502648	121521156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_121502734_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
m54284U_201203_174622/62718974/ccs	chrX	-	1810	12	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	0	-829	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	279.519747524568	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGTCTTTTTATAGC	NA	False	NA	-6	True	AATAAA	-17	NA	162741657	162719267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741583
m54284U_201203_174622/62720134/ccs	chr17	-	2158	8	NNC	ENSMUSG00000024197.11	novel	3645	8	NA	NA	0	-1484	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	203.915148419881	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGTGTATATGTGTG	NA	False	NA	-3	True	AATAAA	-23	NA	56597511	56585959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_56587071_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
m54284U_201203_174622/62720489/ccs	chr2	-	190	1	Intergenic	novelGene_1326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	484	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATGGCCAATGAGCTTA	NA	False	NA	-1	True	NA	NA	NA	181177259	181177069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181177100_181177300
m54284U_201203_174622/62720804/ccs	chr12	-	4145	2	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	0	-6975	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCATGAGTCTCTTATT	NA	False	NA	-5	True	AATAAA	-45	NA	20865780	20861356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_20865068_20865346
m54284U_201203_174622/62783838/ccs	chr7	+	1857	16	NNC	ENSMUSG00000070699.6	novel	1868	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	57.3366665697731	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGGAAGTGCTGGCTG	268	False	NA	25	True	AATAAA	-33	NA	28441416	28453296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446932_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
m54284U_201203_174622/62850629/ccs	chr17	+	4246	10	NNC	ENSMUSG00000005370.5	novel	4251	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_9	833.297999250902	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	NA	False	NA	31	True	AATAAA	-20	NA	88282489	88298320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298156
m54284U_201203_174622/62914783/ccs	chr14	-	3119	6	NIC	ENSMUSG00000013701.14	novel	1173	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3717	junction_3	323.099736923446	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTTTTCCAAATAAAGGG	NA	False	NA	NA	False	TTTAAA	-23	NA	31923855	31902174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_31902628_31911100_31911212_31913298_31915445_31915810_31915905_31920925_31920985_31923599
m54284U_201203_174622/62916013/ccs	chr11	+	1460	1	NIC	ENSMUSG00000020869.9	novel	2837	7	NA	NA	0	-4026	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATAAGACAAAGAATTGGA	NA	False	NA	NA	False	NA	NA	NA	94520592	94522052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_94520600_94522100
m54284U_201203_174622/62916455/ccs	chr16	-	3709	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_12	36.8186091171878	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	False	NA	1	True	AATAAA	-28	NA	10994206	10954455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
m54284U_201203_174622/62917114/ccs	chr8	+	2915	16	NIC	ENSMUSG00000031985.10	novel	2984	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	158.602984419167	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCAATGGTCTTATTAAC	5159	False	NA	34	True	AATAAA	-25	NA	125589810	125616796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_125590052_125597514_125597698_125600071_125600219_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
m54284U_201203_174622/6292144/ccs	chr1	-	4376	17	NIC	ENSMUSG00000116275.2	novel	4395	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_16	101.178060863015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589118	133547608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588993
m54284U_201203_174622/62980661/ccs	chr3	+	3886	12	NIC	ENSMUSG00000038495.15	novel	8043	12	NA	NA	0	-3966	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	20.6325587201114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGATATTAGGGCT	NA	False	NA	NA	False	AATAAA	-20	NA	96011838	96064480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_96011941_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
m54284U_201203_174622/62981537/ccs	chr14	-	6041	8	NIC	ENSMUSG00000021738.6	novel	6853	12	NA	NA	0	-69	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	10.5675668622325	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTGCTTTATGAG	NA	False	NA	NA	False	AATAAA	-27	NA	8456619	8362529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8382230_8382481_8416739_8416845_8456393
m54284U_201203_174622/63113749/ccs	chr3	-	1830	11	NNC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	818.873860860145	604	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352525	108333927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344892_108352312
m54284U_201203_174622/63178115/ccs	chr4	-	171	1	Intergenic	novelGene_2000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTAGGCCGTCTACAC	NA	False	NA	NA	False	NA	NA	NA	108518312	108518141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108518100_108518300
m54284U_201203_174622/63178145/ccs	chr4	+	6015	7	NIC	ENSMUSG00000037692.15	novel	6341	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_1	37.3972666856223	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAACCT	1189	False	NA	NA	False	NA	NA	NA	132738816	132804956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_132738835_132739503_132739599_132782323_132782515_132788091_132788204_132788337_132788376_132788686_132793589_132804297
m54284U_201203_174622/63178291/ccs	chr3	+	2056	11	NNC	ENSMUSG00000015714.12	novel	1524	6	NA	NA	170	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	136.729989395158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4671	False	NA	45	True	AATAAA	-31	NA	95222747	95230910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_95222850_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
m54284U_201203_174622/63179582/ccs	chr16	-	448	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	545	junction_3	2933.80515144866	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631720	84624758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_84624884_84625312_84625438_84628216_84628391_84631696
m54284U_201203_174622/63243386/ccs	chr3	+	269	1	Intergenic	novelGene_1450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCAGACGTACTCTATAA	4453	False	NA	NA	False	NA	NA	NA	83778306	83778575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_83778300_83778600
m54284U_201203_174622/63243399/ccs	chrX	-	7521	6	NNC	ENSMUSG00000056537.12	novel	7429	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	85.0858390097906	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCTTTTTCATCCTT	2373	False	NA	-1	True	AATAAA	-16	NA	103024890	103000768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_103007650_103008856_103008941_103010096_103010287_103022109_103022202_103022878_103022941_103024678
m54284U_201203_174622/63309900/ccs	chr17	+	1883	9	NIC	ENSMUSG00000007570.17	novel	2025	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	48.2720157026822	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGGTGGCTCAGCCCTG	353	False	NA	17	True	AATAAA	-19	NA	28532539	28545546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537035_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
m54284U_201203_174622/63373650/ccs	chr17	+	4055	4	NIC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	153	junction_1	60.5768566001535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	879	False	NA	35	True	AGTAAA	-19	NA	23819829	23829993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_23819934_23824478_23826619_23827081_23827140_23828240
m54284U_201203_174622/63374285/ccs	chr16	-	4824	7	NIC	ENSMUSG00000022757.20	novel	1945	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	532	junction_1	46.1606494273592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTCTTGTTGCCTAAT	NA	False	NA	0	True	AATAAA	-16	NA	56537723	56510694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_56511517_56514762_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
m54284U_201203_174622/63374498/ccs	chr17	+	181	1	Intergenic	novelGene_8367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACTTCAGAATCTGAA	NA	False	NA	NA	False	NA	NA	NA	13075867	13076048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_13075900_13076000
m54284U_201203_174622/63376215/ccs	chr4	+	5239	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	176	junction_2	126.002609482391	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/63439559/ccs	chr7	+	2695	10	NIC	ENSMUSG00000049643.16	novel	1989	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_7	97.9850076715569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTCTGTGTATGT	449	False	NA	NA	False	AATAAA	-20	NA	27252710	27281524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271174_27274015_27274166_27278137_27278209_27279761
m54284U_201203_174622/63440159/ccs	chr13	+	3288	4	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	3	166	junction_3	11.8602979164381	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619259	97633515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_97619286_97619456_97619541_97629663_97630239_97630912
m54284U_201203_174622/63505653/ccs	chr14	+	4444	41	NIC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_40	184.939434342706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
m54284U_201203_174622/63506081/ccs	chr3	-	2860	5	NIC	ENSMUSG00000001017.16	novel	2012	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	677	junction_2	339.682572411362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTTTCTGTTTATTT	NA	False	NA	-1	True	NA	NA	NA	90416805	90406262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_90407415_90409422_90410587_90413414_90413569_90414851_90414934_90416497
m54284U_201203_174622/63506163/ccs	chr17	+	3074	12	NNC	ENSMUSG00000069135.12	novel	3077	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	97.8703814759498	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTACAGTGTTGGTTTT	NA	False	NA	30	True	ATTAAA	-22	NA	8384371	8415307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401062_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
m54284U_201203_174622/63570025/ccs	chr6	-	3319	8	NNC	ENSMUSG00000029814.11	novel	4345	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_7	190.173926837986	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCTTCTGTAGTATGT	NA	False	NA	-24	True	AATAAA	-15	NA	49191638	49062156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082633_49191230
m54284U_201203_174622/63570284/ccs	chr19	+	1751	11	NNC	ENSMUSG00000025157.9	novel	1821	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	126.333091468546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCTTCTCTGTGCCTCG	4139	False	NA	18	True	AATAAA	-24	NA	41921928	41932543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_41922105_41923246_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
m54284U_201203_174622/63571387/ccs	chrX	-	4421	27	NIC	ENSMUSG00000031161.16	novel	4142	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	320	junction_25	44.0732982802714	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAAGTGCTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	7814006	7796362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363
m54284U_201203_174622/63572200/ccs	chr18	+	4154	21	NNC	ENSMUSG00000024260.15	novel	400	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	43.6869259618939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	7519	False	NA	8	True	AATAAA	-20	NA	31768137	31856114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_31768384_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815062_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
m54284U_201203_174622/6358021/ccs	chr2	-	6241	47	NIC	ENSMUSG00000014355.11	novel	8942	48	NA	NA	0	-2600	combination_of_known_junctions	FALSE	canonical	2	6	junction_43	66.9816617117781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTGATTGCTTTGGACTT	NA	False	NA	-2	True	AATAAA	-23	NA	128529311	128454623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522313_128522366_128526421_128526584_128527743_128527981_128529072
m54284U_201203_174622/63635587/ccs	chr9	-	3830	21	NIC	ENSMUSG00000059890.17	novel	6039	20	NA	NA	0	398	combination_of_known_junctions	FALSE	canonical	3	18	junction_18	13.0877805605076	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGCCATTTTTTTCTT	5322	False	NA	NA	False	NA	NA	NA	44876876	44836747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276_44871438_44874634_44874731_44876782
m54284U_201203_174622/63635676/ccs	chr5	+	1718	12	NIC	ENSMUSG00000041939.15	novel	1660	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	45.2173812847221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGGCCCTGTGGGAAG	NA	False	NA	NA	False	AATAAA	-20	NA	114582346	114598652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_114582425_114582712_114582751_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
m54284U_201203_174622/63635687/ccs	chr4	-	3572	18	NIC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_13	317.863412158316	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080462	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
m54284U_201203_174622/63638060/ccs	chr4	-	3344	16	NIC	ENSMUSG00000008305.19	novel	4369	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_12	75.7282862167984	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTCTTCCTCCTTGAC	NA	False	NA	79	True	AGTAAA	-16	NA	72119156	72036043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72116009_72116055_72116154_72116219_72117533_72117635_72118218
m54284U_201203_174622/63702134/ccs	chr11	+	6763	19	NNC	ENSMUSG00000037331.16	novel	6617	19	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_10	158.961405363257	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCTGGTCTCCCATCT	NA	False	NA	17	True	AATAAA	-18	NA	57899740	57952860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940525_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
m54284U_201203_174622/63703707/ccs	chr3	-	179	1	Intergenic	novelGene_1406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAATTAGTAAACT	NA	False	NA	NA	False	NA	NA	NA	53084223	53084044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_53084000_53084200
m54284U_201203_174622/63832349/ccs	chr18	+	3202	11	NIC	ENSMUSG00000060450.15	novel	2410	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	92.6777211631792	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACACGGTGTCCTGTTG	961	False	NA	23	True	AATAAA	-28	NA	38429722	38450902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_38429852_38430518_38430629_38431361_38431449_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
m54284U_201203_174622/63833330/ccs	chr16	-	2093	3	NNC	ENSMUSG00000036304.15	novel	5751	5	NA	NA	0	-5109	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTTCTGCTGCTGTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	43800154	43794617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_43796109_43799270_43799540_43799821
m54284U_201203_174622/63963416/ccs	chr11	+	1864	5	NIC	ENSMUSG00000018379.18	novel	1209	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	275	junction_4	487.699190075194	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGCATGGTTGTCCTTTT	6602	False	NA	21	True	AATAAA	-15	NA	87938550	87942316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237_87940922_87941802
m54284U_201203_174622/63965137/ccs	chr11	-	191	1	Intergenic	novelGene_6423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATATCTGGGTCCTAGT	NA	False	NA	NA	False	NA	NA	NA	107431820	107431629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107431600_107431800
m54284U_201203_174622/64028852/ccs	chr4	-	3564	17	NNC	ENSMUSG00000038047.19	novel	6158	17	NA	NA	0	-2429	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	46.3221987145472	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTACCATTGTGGTC	NA	False	NA	-10	True	TATAAA	-16	NA	86530286	86499520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_86500256_86501117_86501952_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
m54284U_201203_174622/64028926/ccs	chr9	+	2715	18	ISM	ENSMUSG00000032327.15	ENSMUST00000167479.8	2871	19	397	0	252	0	3prime_fragment	TRUE	canonical	1	1	junction_1	1.92416790985837	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGTCCGTAAAGCTAAT	NA	False	NA	NA	False	NA	NA	NA	58042344	58061279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_58042486_58046262_58046330_58046638_58046725_58047696_58047837_58048141_58048166_58048338_58048506_58050197_58050321_58052743_58052812_58052995_58053076_58053280_58053343_58054744_58054908_58056462_58056539_58057360_58057495_58058443_58058562_58058645_58058748_58059161_58059326_58059727_58059884_58060435
m54284U_201203_174622/64029634/ccs	chr9	+	1025	7	NNC	ENSMUSG00000032518.7	novel	1101	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_6	1794.22347796725	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATGGTCCTCACTGCAG	NA	False	NA	5	True	AATAAA	-15	NA	119956854	119960625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960468
m54284U_201203_174622/64029716/ccs	chr4	+	3900	21	NIC	ENSMUSG00000039713.18	novel	3818	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_1	15.3631865184277	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCGCTTCTGGAACGC	NA	False	NA	38	True	TATAAA	-27	NA	152171314	152199857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
m54284U_201203_174622/64029783/ccs	chr11	+	1829	9	NNC	ENSMUSG00000040746.16	novel	1833	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_6	167.464875048471	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAGATCATCTTTACAC	9190	False	NA	30	True	AATAAA	-31	NA	70538112	70542247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540955_70541046_70541589_70541671_70541747
m54284U_201203_174622/64095301/ccs	chr11	-	1963	12	NNC	ENSMUSG00000018171.10	novel	2787	12	NA	NA	0	237	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_11	204.061690558809	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTCCGTTTTCTTTAGT	9872	False	NA	0	True	TATAAA	-23	NA	86574662	86475518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574561
m54284U_201203_174622/64095461/ccs	chr6	+	1631	11	NNC	ENSMUSG00000068328.11	novel	1265	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_7	319.708367109777	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTGTTGCCTCTTTGG	5423	False	NA	9	True	ATTAAA	-19	NA	83031711	83034663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_83031814_83031891_83032030_83032109_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033767_83033860_83033958_83034075_83034256_83034376_83034478
m54284U_201203_174622/64095615/ccs	chr12	+	183	1	Intergenic	novelGene_6827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTGGCAATAGGA	NA	False	NA	NA	False	NA	NA	NA	87292459	87292642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_87292500_87292600
m54284U_201203_174622/64097114/ccs	chr18	-	185	1	Intergenic	novelGene_8983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAACAATTACAAA	NA	False	NA	NA	False	NA	NA	NA	64493880	64493695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_64493700_64493900
m54284U_201203_174622/64161293/ccs	chr7	-	3196	20	NIC	ENSMUSG00000030533.17	novel	3260	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_19	16.1947975641576	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGCATCTGTTTGTTGTT	NA	False	NA	NA	False	AATAAA	-12	NA	79989949	79975043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989861
m54284U_201203_174622/64225854/ccs	chr3	+	4994	23	NIC	ENSMUSG00000025437.16	novel	4183	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	245	junction_12	66.4868252654937	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052151	152098970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
m54284U_201203_174622/64226523/ccs	chr10	-	3951	34	NIC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	140	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	12.3589563334811	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	8582	False	NA	0	True	AATAAA	-15	NA	76561862	76544625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556840_76556921_76556943_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
m54284U_201203_174622/64290900/ccs	chr4	+	1287	8	NIC	ENSMUSG00000028990.14	novel	1817	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	51.1324809905103	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTGTCTATGAAAATTCA	NA	False	NA	27	True	NA	NA	NA	149569696	149581125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_149569731_149570314_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
m54284U_201203_174622/64291887/ccs	chr17	+	5770	14	NNC	ENSMUSG00000063952.17	novel	4223	11	NA	NA	-15656	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	92.7993317666208	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGCGGTGCTGTTTGCT	NA	False	NA	7	True	AATAAA	-16	NA	29004407	29057518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29004515_29018946_29019118_29024902_29026374_29029486_29029644_29033559_29033692_29036038_29036168_29036459_29036773_29037309_29037613_29040059_29040567_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
m54284U_201203_174622/64292696/ccs	chr7	-	4750	19	NIC	ENSMUSG00000010755.18	novel	2462	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	1234	junction_18	90.0291619421174	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCTGGTCTGCCCTCTC	NA	False	NA	-3	True	AATAAA	-15	NA	143153827	143111443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
m54284U_201203_174622/64292992/ccs	chr1	+	3242	14	NIC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	372.047063893104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGTGGGATTTAATGT	NA	False	NA	17	True	ATTAAA	-21	NA	151220268	151240173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_151220507_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
m54284U_201203_174622/64357887/ccs	chr15	-	5067	16	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	109.010009734071	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAATGGGATGTGCGT	NA	False	NA	-3	True	AATAAA	-22	NA	96358724	96312452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96336062_96336232_96341825_96341984_96344390_96344473_96358482
m54284U_201203_174622/64358938/ccs	chr11	-	4392	14	NIC	ENSMUSG00000020451.18	novel	3693	15	NA	NA	0	-200	intron_retention	FALSE	canonical	3	120	junction_13	39.3946802043419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGCCACTTTTCTTG	9814	False	NA	-16	True	AATGAA	-15	NA	3321376	3294455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
m54284U_201203_174622/64423313/ccs	chr15	+	4190	7	NIC	ENSMUSG00000046897.18	novel	989	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	66.5699298148613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	917	False	NA	25	True	AATAAA	-26	NA	102112093	102124041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
m54284U_201203_174622/64424739/ccs	chr5	+	4511	8	NIC	ENSMUSG00000005374.14	novel	7488	7	NA	NA	0	2841	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	100.646278964439	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCGCATGGTGATTCTTTG	9519	False	NA	3	True	NA	NA	NA	135178539	135191516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_135178719_135178843_135178994_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
m54284U_201203_174622/64488797/ccs	chr2	-	3641	20	NIC	ENSMUSG00000006800.15	novel	3927	21	NA	NA	232	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_6	217.647533304337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCTTGGGACTTTTTTGC	NA	False	NA	-10	True	NA	NA	NA	165996973	165915833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
m54284U_201203_174622/64489650/ccs	chr7	-	1654	12	NIC	ENSMUSG00000038502.18	novel	1883	12	NA	NA	121	0	intron_retention	FALSE	canonical	3	386	junction_1	120.334725997909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGTCCCTCCCTGCT	5561	False	NA	-10	True	AATAAA	-13	NA	44519091	44512492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44512619_44512802_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
m54284U_201203_174622/64489949/ccs	chr17	+	3382	17	NNC	ENSMUSG00000001228.15	novel	3391	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	268	junction_4	617.393054377639	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCGCACGTCTTTAA	1447	False	NA	36	True	AATAAA	-20	NA	56611347	56630486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617828_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
m54284U_201203_174622/64490260/ccs	chr7	+	3093	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3333	junction_5	365.272257668471	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201203_174622/64553360/ccs	chr3	-	4782	11	NIC	ENSMUSG00000028106.14	novel	7756	11	NA	NA	0	-2940	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	33.6661551116251	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACGTGCAATGTTGGGG	10010	False	NA	-10	True	AATAAA	-19	NA	95726090	95670592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
m54284U_201203_174622/64554593/ccs	chr3	+	4115	6	NIC	ENSMUSG00000028156.13	novel	856	8	NA	NA	0	231	intron_retention	FALSE	canonical	3	1289	junction_1	304.757608600671	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCTTTTAGACAACTA	NA	False	NA	12	True	AATAAA	-13	NA	138233045	138262206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_138233076_138252081_138252189_138253419_138256088_138256653_138256768_138259342_138259483_138261150
m54284U_201203_174622/64555608/ccs	chr7	-	4139	11	NIC	ENSMUSG00000063511.12	novel	4008	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_10	656.077503043657	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGGCATGTGATGTCT	9074	False	NA	-9	True	AATAAA	-16	NA	45045133	45025885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_45026703_45026779_45026868_45030140_45032609_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044516_45044597_45044932
m54284U_201203_174622/64621200/ccs	chr11	-	201	1	Intergenic	novelGene_6230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCTCTCTGCAACCAG	9972	False	NA	NA	False	NA	NA	NA	95559981	95559780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95559800_95560000
m54284U_201203_174622/64751731/ccs	chr2	+	10688	25	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	170	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	71.5650442293971	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	NA	False	NA	NA	False	AATAAA	-18	NA	29015173	29072483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29015562_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
m54284U_201203_174622/64751914/ccs	chr1	+	4687	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_8	67.1256595250033	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128104560_128104694_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201203_174622/64883265/ccs	chr4	-	3662	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	84	junction_13	380.881985010043	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054532_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069795_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
m54284U_201203_174622/64946224/ccs	chr14	+	1459	11	NIC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	686.96809241769	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881338	21895587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_21881513_21881645_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
m54284U_201203_174622/64947984/ccs	chr17	-	3324	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_22	45.6465037629951	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTGGCAGTCCCTC	NA	False	NA	-6	True	AATAAA	-20	NA	45997063	45971096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45996841
m54284U_201203_174622/64948411/ccs	chr15	-	6509	39	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	0	0	intron_retention	FALSE	canonical	3	242	junction_21	72.0484072807286	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199514	89172485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
m54284U_201203_174622/64948880/ccs	chr4	-	152	1	Intergenic	novelGene_2316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAATAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	142383131	142382979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_142383000_142383100
m54284U_201203_174622/65011926/ccs	chr16	-	1556	8	NIC	ENSMUSG00000003528.16	novel	1666	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	232	junction_6	574.006399736776	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCCTGTCCATCCCTTTG	NA	False	NA	-21	True	AATAAA	-16	NA	17746073	17743086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745408_17745517_17745849
m54284U_201203_174622/65012982/ccs	chr8	+	4349	24	NNC	ENSMUSG00000031805.18	novel	4019	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_10	50.224599520309	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTTTTTCCCCCCTGGG	NA	False	NA	10	True	AATAAA	-13	NA	72129195	72143219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_72129228_72130972_72131166_72131320_72131445_72131621_72131734_72131845_72131992_72132202_72133202_72133283_72133442_72133526_72133639_72134144_72134332_72134706_72134828_72134925_72135058_72135543_72135629_72135975_72136104_72136596_72136730_72136860_72137013_72137127_72137279_72137809_72137950_72138028_72138219_72138392_72138518_72138596_72138770_72139498_72139617_72139882_72139994_72140683_72140807_72142815
m54284U_201203_174622/65014055/ccs	chr4	-	3002	18	NIC	ENSMUSG00000028678.14	novel	2842	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	415	junction_12	22.9179369470735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGCAGATTCTGTGTGA	NA	False	NA	88	True	AATAAA	-17	NA	117039739	117016835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
m54284U_201203_174622/65078852/ccs	chr9	-	4652	21	NIC	ENSMUSG00000043067.16	novel	3489	23	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_19	68.8904202338758	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATGTGTTTTCTGCC	NA	False	NA	-5	True	AATAAA	-19	NA	24414436	24323073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24397000_24397026_24414134
m54284U_201203_174622/65142987/ccs	chr9	-	183	1	Intergenic	novelGene_4743	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGGGATTGAGCTCATG	3797	False	NA	-8	True	NA	NA	NA	45903790	45903607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_45903600_45903800
m54284U_201203_174622/65209156/ccs	chr15	-	176	1	Intergenic	novelGene_7614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATGCATTCAAA	NA	False	NA	NA	False	NA	NA	NA	7089695	7089519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_7089500_7089700
m54284U_201203_174622/65209172/ccs	chr4	+	1965	5	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	0	-1550	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	1221.62934231296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGGCAGTGGCGCATAT	NA	False	NA	0	True	NA	NA	NA	129714013	129742221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129714395_129732770_129733472_129736462_129736556_129740257_129740333_129741506
m54284U_201203_174622/65210838/ccs	chrX	-	4764	22	NNC	ENSMUSG00000064127.14	novel	627	3	NA	NA	238	6479	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	23.1877870739697	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTATTACTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	12628074	12566132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_12567863_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
m54284U_201203_174622/65274023/ccs	chr13	-	2086	10	ISM	ENSMUSG00000047117.14	ENSMUST00000239137.2	3003	14	25017	649	-126	0	3prime_fragment	FALSE	canonical	0	0	junction_3	2.67129228448251	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTTGTTCGTTGTATC	NA	False	NA	NA	False	NA	NA	NA	96582651	96553602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_96554409_96556172_96556305_96557227_96557430_96561240_96561337_96566293_96566393_96569809_96569909_96572380_96572480_96578064_96578164_96580786_96580886_96582296
m54284U_201203_174622/65276683/ccs	chr1	-	3259	26	NIC	ENSMUSG00000026116.12	novel	591	6	NA	NA	-89	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	61.8143543200121	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTTCTTTTCATTATA	7132	False	NA	NA	False	AATAAA	-22	NA	36978697	36853222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_36853499_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
m54284U_201203_174622/65406089/ccs	chr15	-	1779	11	NNC	ENSMUSG00000016664.17	novel	3693	11	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	186.09731325304	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCACTTTGCTCAG	7107	False	NA	NA	False	AGTAAA	-19	NA	83348807	83259807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_83260018_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
m54284U_201203_174622/65470663/ccs	chr2	+	5050	36	ISM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	2177	0	2177	0	3prime_fragment	FALSE	canonical	3	459	junction_11	64.3521941969284	1093	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
m54284U_201203_174622/65471150/ccs	chr19	-	2649	9	NIC	ENSMUSG00000037916.15	novel	1661	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1250	junction_6	104.39520762468	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	6524	False	NA	-3	True	AATAAA	-24	NA	4062708	4057502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4061273_4061345_4061429_4062550
m54284U_201203_174622/65471205/ccs	chr2	-	1408	13	NIC	ENSMUSG00000027406.14	novel	1233	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	219.740171692742	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATCTGGTTTTGTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	130126381	130121232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_130121358_130121475_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
m54284U_201203_174622/65472538/ccs	chr5	-	3903	3	NNC	ENSMUSG00000029196.10	novel	3791	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTCTGTTTGCTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	36641629	36631013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_36634307_36640321_36640434_36641131
m54284U_201203_174622/65473256/ccs	chr2	-	4183	18	NIC	ENSMUSG00000038324.14	novel	3204	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	309	junction_11	38.5424764558465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACTTTGTCCATGATGT	NA	False	NA	7	True	ATTAAA	-42	NA	155534252	155476190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
m54284U_201203_174622/65536090/ccs	chrX	+	3602	23	NIC	ENSMUSG00000041133.12	novel	4691	25	NA	NA	66	-721	combination_of_known_junctions	FALSE	canonical	3	167	junction_1	147.492463737996	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATCTAAATTTGATTC	NA	False	NA	20	True	AATAAA	-24	NA	150799489	150844969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_150799637_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
m54284U_201203_174622/65538810/ccs	chr19	+	4379	10	NIC	ENSMUSG00000024883.9	novel	4184	10	NA	NA	87	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	8.35330939076111	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGCTTGATAACTAGAA	NA	False	NA	4	True	NA	NA	NA	5100595	5107099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_5100900_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
m54284U_201203_174622/6555197/ccs	chr12	+	3409	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	-585	combination_of_known_junctions	FALSE	canonical	3	65	junction_21	449.844346977859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGAGTTAAATTATT	NA	False	NA	36	True	AATAAA	-30	NA	105750991	105802532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105801421
m54284U_201203_174622/65667097/ccs	chr11	-	4298	22	NNC	ENSMUSG00000033909.18	novel	5655	21	NA	NA	50	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	41.9506242537992	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGGCTACCAGTAGCAA	NA	False	NA	-15	True	GATAAA	-20	NA	118180956	118151679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178425_118178453_118178572_118178650_118180782
m54284U_201203_174622/65668077/ccs	chr4	-	2040	14	NIC	ENSMUSG00000028702.16	novel	2780	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	159.602464722704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980882	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115976034_115976155_115980092_115980180_115980258_115980346_115980675
m54284U_201203_174622/65668284/ccs	chr18	+	3321	29	NIC	ENSMUSG00000024589.19	novel	3792	31	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_14	31.3455681533633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATGAATGGAATTAATCA	NA	False	NA	NA	False	AATAAA	-22	NA	65020775	65346262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
m54284U_201203_174622/656775/ccs	chrX	-	5557	6	NIC	ENSMUSG00000051323.17	novel	10289	6	NA	NA	0	-4709	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	6.04648658313239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAAAGCTCTGGACA	NA	False	NA	NA	False	NA	NA	NA	132589736	132488337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132582840_132582982_132585866
m54284U_201203_174622/65725/ccs	chr6	-	344	1	FSM	ENSMUSG00000059159.7	ENSMUST00000118230.2	213	1	-52	-79	-52	79	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAACATCAAGCCGGGTG	NA	False	NA	NA	False	NA	NA	NA	52323979	52323635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_52323600_52324000
m54284U_201203_174622/657302/ccs	chr19	+	2294	16	NIC	ENSMUSG00000025217.16	novel	2978	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_2	153.826684580046	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352195	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_45352326_45394983_45395026_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
m54284U_201203_174622/65733482/ccs	chrX	-	2758	10	NNC	ENSMUSG00000036022.16	novel	3536	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	24.833271190576	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATCGTAAAAGTCTGCCT	NA	False	NA	-13	True	AATAAA	-24	NA	52357897	52332301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_52334249_52335026_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
m54284U_201203_174622/65733512/ccs	chr4	+	5636	22	NIC	ENSMUSG00000078517.13	novel	4706	23	NA	NA	0	222	intron_retention	FALSE	canonical	3	332	junction_13	35.438618647035	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTGTCTTCAG	NA	False	NA	18	True	AATAAA	-20	NA	139079919	139104769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
m54284U_201203_174622/65733573/ccs	chr19	+	5701	26	NIC	ENSMUSG00000024811.12	novel	6481	27	NA	NA	0	-591	combination_of_known_junctions	FALSE	canonical	3	243	junction_17	153.021912156397	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCATGGTAATTCATTGA	NA	False	NA	31	True	AATAAA	-20	NA	36811631	36870286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
m54284U_201203_174622/65733829/ccs	chr7	-	4733	33	NIC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	41	junction_22	30.5222607032556	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
m54284U_201203_174622/65734611/ccs	chr9	+	4587	15	NIC	ENSMUSG00000009741.16	novel	1623	16	NA	NA	213	0	intron_retention	FALSE	canonical	3	224	junction_7	62.5713062621114	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTCACTCATTTCAAATC	1515	False	NA	23	True	AATAAA	-23	NA	113760214	113806270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201203_174622/65864866/ccs	chr10	-	4462	25	NIC	ENSMUSG00000020074.8	novel	4352	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	105.381837131558	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGTTCCTTCAGAA	NA	False	NA	0	True	ATTAAA	-18	NA	62628057	62579706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627920
m54284U_201203_174622/65865802/ccs	chr14	+	1044	7	NIC	ENSMUSG00000025545.11	novel	1231	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	249.458357691664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGGTTTTGCTATTGT	NA	False	NA	12	True	AATAAA	-22	NA	122419115	122639646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_122419194_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
m54284U_201203_174622/65931543/ccs	chr11	-	3758	3	NNC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	71	junction_1	39.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714839	96708256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_96711343_96712929_96713146_96714383
m54284U_201203_174622/65996099/ccs	chr8	-	1837	11	NIC	ENSMUSG00000031667.17	novel	2200	11	NA	NA	0	-319	combination_of_known_splicesites	FALSE	canonical	3	13	junction_9	155.801283691759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAAAGTAATGCTCCT	NA	False	NA	-10	True	AATAAA	-26	NA	91860655	91850515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857777_91858550_91858632_91860527
m54284U_201203_174622/65996996/ccs	chr12	-	3079	7	NIC	ENSMUSG00000033713.13	novel	2882	6	NA	NA	0	131	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	38.9615194775563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAAACAAACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	99359331	99161221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619_99355177_99359010
m54284U_201203_174622/65997189/ccs	chr11	-	175	1	Intergenic	novelGene_6158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTAAGAGTGAATA	5393	False	NA	NA	False	NA	NA	NA	86678587	86678412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_86678400_86678600
m54284U_201203_174622/66062395/ccs	chr1	+	4145	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	20	junction_14	111.749131901441	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9370	False	NA	19	True	AATAAA	-20	NA	87603960	87648229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625070_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635802_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
m54284U_201203_174622/66062491/ccs	chr4	+	3455	13	NIC	ENSMUSG00000029071.17	novel	3284	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	113	junction_6	17.1334630345285	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGGCTTGTTTCT	NA	False	NA	20	True	AAAAAG	-18	NA	155931917	155943760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
m54284U_201203_174622/66127105/ccs	chr9	+	5388	17	NIC	ENSMUSG00000032536.13	novel	5363	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_15	60.0020507462037	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTGTCTTTTTTTAGT	NA	False	NA	11	True	AATAAA	-19	NA	121126599	121303984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289782_121298050_121298154_121301302
m54284U_201203_174622/66127510/ccs	chr11	-	2361	1	NIC	ENSMUSG00000059534.9	novel	434	2	NA	NA	-1	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGGCTTTTGCACGAGTC	NA	False	NA	-8	True	AATAAA	-17	NA	4654335	4651974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_4652000_4654300
m54284U_201203_174622/66128150/ccs	chr9	+	4348	6	NIC	ENSMUSG00000032519.12	novel	1791	7	NA	NA	0	-162	intron_retention	FALSE	canonical	3	152	junction_2	4.4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTCTGTGACAGAACCA	1760	False	NA	22	True	AATAAA	-39	NA	119939439	119953408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_119939639_119945567_119945690_119946518_119949503_119949738_119949914_119951159_119951327_119952707
m54284U_201203_174622/66128310/ccs	chr19	+	1198	1	FSM	ENSMUSG00000058927.7	ENSMUST00000073080.7	946	1	0	-252	0	252	mono-exon	FALSE	NA	NA	NA	NA	NA	295	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAATAATTATATTTAT	NA	False	NA	NA	False	ATTAAA	-26	NA	24853049	24854247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_24853000_24854200
m54284U_201203_174622/66192981/ccs	chrX	-	185	1	Intergenic	novelGene_9426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTACTACGAAAGACCTATA	NA	False	NA	NA	False	NA	NA	NA	36393098	36392913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_36392900_36393100
m54284U_201203_174622/66193023/ccs	chr16	-	5840	10	NIC	ENSMUSG00000034064.15	novel	2922	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	209	junction_9	250.773027080488	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCATTGGCTCCTCATTT	6230	False	NA	-4	True	NA	NA	NA	38370620	38345501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369999_38370444
m54284U_201203_174622/6620119/ccs	chr6	+	4609	13	NIC	ENSMUSG00000001632.17	novel	4826	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	36	junction_6	50.9032306331228	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	287	False	NA	28	True	AATAAA	-16	NA	113284152	113301821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113299048_113299373_113299529_113300943
m54284U_201203_174622/6621385/ccs	chr4	-	5107	8	NIC	ENSMUSG00000028436.9	novel	3442	9	NA	NA	68	0	intron_retention	FALSE	canonical	3	440	junction_1	53.0813776484863	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGAGTGACTATATA	15	True	NA	0	True	AATAAA	-18	NA	41314821	41291299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41301395_41302613_41302821_41313210_41313466_41314487
m54284U_201203_174622/66258136/ccs	chr11	-	3371	3	NIC	ENSMUSG00000038615.18	novel	3547	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	71	junction_1	153.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCAGCTTAAGTGCACT	NA	False	NA	-23	True	AATAAA	-16	NA	96714839	96708256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_96711343_96712929_96713146_96714770
m54284U_201203_174622/66323587/ccs	chr18	+	8102	46	NNC	ENSMUSG00000024542.10	novel	8093	46	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_36	36.8931322860576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTTTTTGTATTTTA	113	False	NA	10	True	AATAAA	-19	NA	67933182	68018241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_67933257_67933724_67933896_67936058_67936227_67937435_67937565_67940327_67940477_67943146_67943200_67945396_67945518_67946942_67947071_67948924_67949067_67949803_67949932_67951840_67952202_67953359_67953504_67956345_67956411_67957652_67957863_67961421_67961546_67962903_67963035_67967566_67968390_67968479_67968595_67970987_67971157_67974054_67974932_67976206_67976356_67980422_67980654_67983182_67983309_67983480_67983625_67983745_67983807_67984735_67984876_67985027_67985121_67985974_67986094_67987121_67987299_67988355_67988447_67989218_67989396_67991060_67991322_67991925_67992042_67993604_67993715_67995479_67995625_67998660_67998864_67999501_67999626_68001511_68001618_68002400_68002609_68003642_68003723_68004532_68004629_68011026_68011147_68011609_68011732_68013818_68013949_68014354_68014414_68017809
m54284U_201203_174622/66325276/ccs	chr1	-	6003	10	NIC	ENSMUSG00000009907.18	novel	4539	12	NA	NA	0	-1727	intron_retention	FALSE	canonical	3	455	junction_4	36.5026635253435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTTTTATATGTTT	85	False	NA	-1	True	AGTAAA	-14	NA	106724397	106698886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106717816_106719407_106719520_106724150
m54284U_201203_174622/66520502/ccs	chr6	+	2592	16	NNC	ENSMUSG00000038279.11	novel	2597	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	257.356786496015	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGTTGTGTTTTTTGA	5437	False	NA	25	True	AATATA	-17	NA	125108871	125121716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_125108967_125109170_125109282_125110481_125110528_125110681_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
m54284U_201203_174622/66521225/ccs	chr11	+	3585	16	NNC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_6	294.966318227843	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534195_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
m54284U_201203_174622/66521600/ccs	chr9	-	2992	13	NIC	ENSMUSG00000048537.17	novel	3589	17	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	9.3392838174146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGTGGAAGTCTGAG	NA	False	NA	0	True	AATAAA	-18	NA	44619818	44597604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609015_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44619690
m54284U_201203_174622/66521646/ccs	chr8	-	4764	17	NIC	ENSMUSG00000031858.17	novel	5369	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	161	junction_6	42.4483141596931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCCTGATGTTAGAG	NA	False	NA	-6	True	NA	NA	NA	70495384	70471216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
m54284U_201203_174622/66521812/ccs	chr2	+	1157	11	NIC	ENSMUSG00000005881.14	novel	1377	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	252.247675906043	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTCTCAGTGTGATT	NA	False	NA	16	True	AATAAA	-19	NA	155850025	155860199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_155850149_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
m54284U_201203_174622/66652641/ccs	chr15	-	155	1	Intergenic	novelGene_8006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATTTCTAGCTGGTAC	NA	False	NA	NA	False	NA	NA	NA	102321189	102321034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102321000_102321200
m54284U_201203_174622/66716494/ccs	chr5	-	2707	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4248	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	6.23609564462324	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110585435	110577740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_110580012_110580270_110580449_110580766_110580968_110585378
m54284U_201203_174622/66716938/ccs	chr14	+	1044	9	NIC	ENSMUSG00000053453.10	novel	951	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	287.160125191504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508528	8520749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_8508579_8512131_8512284_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
m54284U_201203_174622/66716942/ccs	chr17	-	1517	9	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_6	914.476352892736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512050_80512511_80512690_80512868_80513276_80513458_80514603
m54284U_201203_174622/66781784/ccs	chr3	+	5389	21	NIC	ENSMUSG00000001415.11	novel	4448	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	259	junction_9	42.9677495338073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCCTGCTGTGTCTTCT	NA	False	NA	13	True	AATAAA	-20	NA	88243617	88269645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
m54284U_201203_174622/668/ccs	chr5	+	3386	6	NIC	ENSMUSG00000053094.16	novel	3570	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_4	220.985610391265	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTGCCGTTTTAATTC	9017	False	NA	14	True	AATAAA	-15	NA	130251175	130272507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130269188_130269333_130270118
m54284U_201203_174622/66848690/ccs	chr9	+	4081	10	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	73.2956131946534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_19533582_19535527_19535595_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
m54284U_201203_174622/66849330/ccs	chr12	+	3559	7	NIC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	-600	intron_retention	FALSE	canonical	3	190	junction_5	19.1978007999759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120040	113129068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_113120192_113120294_113120374_113120780_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
m54284U_201203_174622/66849527/ccs	chrX	-	2581	5	NIC	ENSMUSG00000045010.15	novel	1991	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	142	junction_4	69.9052930757035	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838029	100833953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_100834130_100834212_100834891_100835166_100835250_100835786_100835944_100836542
m54284U_201203_174622/6686549/ccs	chr11	+	7835	39	NIC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	8	junction_1	133.250823096729	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152577	78181449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78153136_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
m54284U_201203_174622/6686633/ccs	chrX	-	166	1	Intergenic	novelGene_9502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	73047199	73047033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_73047000_73047200
m54284U_201203_174622/66913606/ccs	chr4	+	3033	11	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	26	junction_4	131.149380478903	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860877_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
m54284U_201203_174622/66914337/ccs	chr1	-	6880	24	NIC	ENSMUSG00000026425.16	novel	8026	23	NA	NA	0	-1241	combination_of_known_junctions	TRUE	canonical	1	1	junction_2	36.103662974153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCTGTACGTCACCTCCC	NA	False	NA	-8	True	AATAAA	-18	NA	131455085	131214229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_131217479_131219333_131219429_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131261594_131261623_131264127_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
m54284U_201203_174622/66979163/ccs	chr2	-	7608	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39360	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_31	39.5207448481984	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1530	False	NA	-4	True	AATAAA	-19	NA	59881054	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59814125_59814315_59831849_59831901_59836386_59836534_59880905
m54284U_201203_174622/66979817/ccs	chr4	-	1166	1	Intergenic	novelGene_1873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAAAAGAAAGCAAGCTA	NA	False	NA	NA	False	NA	NA	NA	55385308	55384142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_55384100_55385300
m54284U_201203_174622/67043524/ccs	chr17	+	5277	20	NIC	ENSMUSG00000023809.11	novel	5406	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	41.8400198090026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTCTGGGATAATGAG	NA	False	NA	NA	False	AATAAA	-22	NA	7437525	7570714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_7437843_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
m54284U_201203_174622/67045181/ccs	chr7	-	148	1	Intergenic	novelGene_3786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAGAAAAAAAGCCTG	NA	False	NA	NA	False	NA	NA	NA	34041135	34040987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_34041000_34041100
m54284U_201203_174622/67045206/ccs	chr5	+	187	1	Intergenic	novelGene_2808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATTTCCAATGCCCAGA	NA	False	NA	NA	False	NA	NA	NA	115791460	115791647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115791500_115791600
m54284U_201203_174622/67045840/ccs	chr5	-	187	1	Intergenic	novelGene_2765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTACCTTAAAAAAAATATC	NA	False	NA	NA	False	NA	NA	NA	110365320	110365133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_110365100_110365300
m54284U_201203_174622/67111458/ccs	chr4	+	2022	17	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	0	136	combination_of_known_junctions	FALSE	canonical	2	16	junction_3	235.974434195211	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959685_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
m54284U_201203_174622/67174415/ccs	chr9	-	3626	2	Antisense	novelGene_ENSMUSG00000025898.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCCCAAACATTTATCTAA	NA	False	NA	NA	False	NA	NA	NA	3416796	3413098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_3416226_3416297
m54284U_201203_174622/67175613/ccs	chr14	+	1669	7	NIC	ENSMUSG00000021906.15	novel	2376	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	81.7851181790156	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATGTTTAATGTTTCAG	NA	False	NA	20	True	AATACA	-19	NA	31807833	31825159	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31822942_31823052_31824213
m54284U_201203_174622/67176187/ccs	chr6	+	4517	18	NIC	ENSMUSG00000038538.18	novel	4243	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	15.2512975226558	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	18	True	NA	NA	NA	38410884	38479514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440985_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38466188_38466240_38467318_38468867_38475622_38475855_38476121_38476212_38479172
m54284U_201203_174622/67241073/ccs	chr7	-	217	1	Intergenic	novelGene_4020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCCTTGGGGCCTGAGT	8138	False	NA	NA	False	NA	NA	NA	109715736	109715519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_109715500_109715700
m54284U_201203_174622/67307642/ccs	chr17	+	3912	26	NNC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_23	169.327016155131	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365245_35365330_35365732_35365880_35366116
m54284U_201203_174622/67307877/ccs	chr4	-	5713	38	NNC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_18	48.2641108627347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199766_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
m54284U_201203_174622/67502962/ccs	chr6	-	1382	1	Intergenic	novelGene_3429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	115662425	115661043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_115661000_115662400
m54284U_201203_174622/67503673/ccs	chr2	-	3005	16	NIC	ENSMUSG00000027201.17	novel	2071	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	215.150634569261	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGCTTACTTGTTGCTT	NA	False	NA	-9	True	NA	NA	NA	124965543	124929661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
m54284U_201203_174622/6750832/ccs	chr4	+	176	1	Intergenic	novelGene_2323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTATAAGTTTTGG	NA	False	NA	NA	False	NA	NA	NA	144042178	144042354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_144042200_144042400
m54284U_201203_174622/67567963/ccs	chr18	-	3538	12	NNC	ENSMUSG00000073542.4	novel	3576	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	20.7101204947989	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTTGGATGTCTTGA	830	False	NA	-4	True	AATAAA	-18	NA	67774406	67750869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770396_67771335_67771412_67773077_67773234_67774181
m54284U_201203_174622/67634524/ccs	chr2	+	2535	8	NNC	ENSMUSG00000054766.14	novel	2824	8	NA	NA	248	0	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	5379.76201582735	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29952112	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
m54284U_201203_174622/67634689/ccs	chr6	-	4125	18	NIC	ENSMUSG00000038456.10	novel	4468	19	NA	NA	142	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_14	27.1251106227713	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCCTAGTGAGTGTAT	NA	False	NA	-7	True	AATAAA	-21	NA	39534659	39439311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39440386_39441145_39441233_39441984_39442225_39442517_39442636_39445706_39445749_39447132_39447311_39457134_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39483634_39483757_39485175_39485304_39499589_39500694_39534508
m54284U_201203_174622/67700969/ccs	chr7	-	3633	20	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_18	1690.34821930071	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680713_110680841_110681991
m54284U_201203_174622/67701274/ccs	chr4	-	186	1	Intergenic	novelGene_2284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGCCTTCAAGGTAGC	NA	False	NA	NA	False	NA	NA	NA	138865875	138865689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_138865700_138865900
m54284U_201203_174622/67701385/ccs	chr1	+	214	1	Intergenic	novelGene_184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGGGCTAAATGTAGA	931	False	NA	NA	False	NA	NA	NA	74296930	74297144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74296900_74297100
m54284U_201203_174622/67765478/ccs	chr10	+	4268	19	NIC	ENSMUSG00000019978.17	novel	4385	20	NA	NA	0	0	intron_retention	FALSE	canonical	2	9	junction_12	105.482562481456	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCACTTCTCTTTTCAT	NA	False	NA	NA	False	AATAAA	-20	NA	25235753	25399417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
m54284U_201203_174622/67896549/ccs	chr14	-	314	1	Intergenic	novelGene_7370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAAATG	NA	False	NA	NA	False	NA	NA	NA	26720096	26719782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26719800_26720100
m54284U_201203_174622/67897687/ccs	chr7	-	162	1	Intergenic	novelGene_3866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGAAAGTCCAAT	NA	False	NA	NA	False	NA	NA	NA	49645950	49645788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_49645800_49646000
m54284U_201203_174622/68093099/ccs	chr5	+	166	1	Intergenic	novelGene_2892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACCAAAAAAACCCAA	NA	False	NA	NA	False	NA	NA	NA	123888185	123888351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123888200_123888400
m54284U_201203_174622/68157505/ccs	chr7	+	5506	15	NIC	ENSMUSG00000033904.17	novel	5073	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	69	junction_11	11.8960206002868	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGGATCTCTTTTAG	NA	False	NA	10	True	AATAAA	-20	NA	118311774	118336247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118332196_118334490
m54284U_201203_174622/68158122/ccs	chr16	+	4032	17	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	1	16	junction_11	173.766186296414	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAACTGAAAGTTAT	1088	False	NA	16	True	AATAAA	-27	NA	93629122	93672961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659392_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
m54284U_201203_174622/68158574/ccs	chr17	+	3586	10	NIC	ENSMUSG00000042099.17	novel	2652	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	238	junction_1	47.8789626216817	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTATTGTGTGGATGGAA	NA	False	NA	13	True	AATAAA	-16	NA	34029496	34041892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34029540_34035159_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
m54284U_201203_174622/6816278/ccs	chr19	-	2035	11	NIC	ENSMUSG00000024824.8	novel	2081	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	128.010155847105	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGTGTTCCCCGTGAC	5972	False	NA	0	True	AATAAA	-15	NA	4251661	4245194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4250985_4251327_4251399_4251481
m54284U_201203_174622/68371/ccs	chr8	+	3400	21	NNC	ENSMUSG00000031960.15	novel	5750	21	NA	NA	0	-2092	at_least_one_novel_splicesite	FALSE	canonical	2	49	junction_1	741.049787463703	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATGTCATGCGCTCTGC	NA	False	NA	19	True	AATAAA	-21	NA	111760547	111782204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_111760652_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
m54284U_201203_174622/68421870/ccs	chr2	-	207	1	Intergenic	novelGene_771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGACTGTTGGTGCAG	NA	False	NA	NA	False	NA	NA	NA	37662509	37662302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_37662300_37662500
m54284U_201203_174622/68486619/ccs	chr1	+	5676	29	NIC	ENSMUSG00000048000.16	novel	5724	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_11	40.8328318031119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGGTCTCTCTGAG	NA	False	NA	7	True	AATAAA	-17	NA	87254751	87378518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334723_87334924_87335014_87335178_87335259_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
m54284U_201203_174622/68487702/ccs	chr11	-	5379	13	NNC	ENSMUSG00000020173.18	novel	5541	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	119	junction_8	139.626958356902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	12414960	12186677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_12188060_12199649_12199914_12201022_12201143_12203079_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
m54284U_201203_174622/68553472/ccs	chr11	-	3124	13	NIC	ENSMUSG00000040667.12	novel	2453	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	678	junction_7	79.5083416308559	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTGCTTTACAATT	NA	False	NA	-4	True	AATAAA	-44	NA	70860799	70833902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_70834149_70834704_70834824_70834937_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
m54284U_201203_174622/68616316/ccs	chr11	+	3291	15	NIC	ENSMUSG00000018765.6	novel	2951	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	970	junction_6	98.3810013598735	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTCCCATGTTGCC	NA	False	NA	12	True	AATAAA	-15	NA	69523815	69544123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69540055_69540553_69540664_69541288_69541376_69541669_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
m54284U_201203_174622/68683741/ccs	chr2	-	3589	21	NIC	ENSMUSG00000058594.16	novel	3567	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_19	66.9909695406776	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCAGTACTGTCATTT	NA	False	NA	-2	True	ATTAAA	-35	NA	11782361	11747385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774560_11774743_11782214
m54284U_201203_174622/68683747/ccs	chr18	+	2696	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	199.323581143828	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737019	24771867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24737190_24739913_24739993_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
m54284U_201203_174622/68684244/ccs	chr7	+	3443	15	NIC	ENSMUSG00000030852.19	novel	3492	16	NA	NA	0	0	intron_retention	FALSE	canonical	1	5	junction_1	82.3265337741442	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTGTGGCTGTGAGTTA	NA	False	NA	30	True	AATAAA	-42	NA	130247959	130366515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_130248161_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
m54284U_201203_174622/68747280/ccs	chr5	+	4099	23	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_3	225.899048615281	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186421	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_139186455_139200912_139201010_139209348_139209541_139211022_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201203_174622/68747948/ccs	chr13	+	3255	3	NNC	ENSMUSG00000078952.10	novel	2764	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	71.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCGAACTCAAGACCTC	NA	False	NA	21	True	AATAAA	-18	NA	97619208	97633515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_97619286_97629663_97630239_97630912
m54284U_201203_174622/68748862/ccs	chr11	-	193	1	Intergenic	novelGene_6445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACATTTACTTGGAATG	NA	False	NA	NA	False	NA	NA	NA	114750530	114750337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_114750300_114750500
m54284U_201203_174622/68815607/ccs	chr2	+	5037	24	NIC	ENSMUSG00000026743.17	novel	5063	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	73.2903437033231	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTCTGTGCCCTGCCTTC	4642	False	NA	12	True	AATAAA	-16	NA	18069446	18217199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_18069650_18069845_18070006_18075935_18076016_18097594_18097646_18106268_18106324_18114592_18114703_18127055_18127160_18128529_18128624_18130944_18131041_18151587_18151684_18164266_18164523_18167127_18167698_18175064_18175110_18175853_18175887_18191028_18191208_18201393_18201512_18202735_18202809_18208411_18208567_18210811_18211001_18211361_18211451_18211590_18211956_18212593_18212691_18213560_18213759_18215578
m54284U_201203_174622/6883478/ccs	chr19	-	4798	16	NIC	ENSMUSG00000063904.5	novel	2683	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	495	junction_15	96.1263057995399	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCAGTGTATGTTTCT	NA	False	NA	-7	True	AATAAA	-15	NA	4978275	4957258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4960037_4963800_4963981_4964607_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
m54284U_201203_174622/6883876/ccs	chr16	-	3112	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	314.772974555002	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4833467_4836263_4836389_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
m54284U_201203_174622/68879938/ccs	chr2	-	1972	14	NIC	ENSMUSG00000039648.15	novel	2038	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	49.6595510039827	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	False	NA	-5	True	AATAAA	-23	NA	30095859	30075137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30082199_30082298_30084065_30084125_30095644
m54284U_201203_174622/68880161/ccs	chr11	-	931	4	NNC	ENSMUSG00000020865.17	novel	5005	31	NA	NA	-343	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	32.8937684067971	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTCACATGTTACCTT	592	False	NA	-4	True	AATAAA	-17	NA	94242355	94234120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_94234602_94236772_94236968_94241761_94241929_94242267
m54284U_201203_174622/68880483/ccs	chr2	+	2787	5	NIC	ENSMUSG00000027628.11	novel	2766	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	64.3481740222673	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCCCCTGTGTGAGTCTC	NA	False	NA	7	True	ATTAAA	-18	NA	156389515	156410076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_156389804_156391771_156391948_156392568_156393370_156397746_156397977_156408784
m54284U_201203_174622/68880514/ccs	chr4	+	2499	9	NIC	ENSMUSG00000035649.18	novel	2503	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	46.0867049700887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTATTGTTACAAAAG	10	True	NA	NA	False	AATAAA	-26	NA	44756587	44932215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_44756697_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
m54284U_201203_174622/68880537/ccs	chr13	-	4067	28	NIC	ENSMUSG00000042590.18	novel	4325	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_13	154.512934453981	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGACTTGTTGTCTGTT	NA	False	NA	-6	True	ATTAAA	-19	NA	107073453	106930946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107073267
m54284U_201203_174622/68881168/ccs	chr2	-	7869	36	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_34	49.9180880062937	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	NA	False	NA	-4	True	AATAAA	-19	NA	59956084	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59831849_59831901_59836386_59836534_59907213_59907256_59955806
m54284U_201203_174622/68945738/ccs	chr1	+	7187	8	NIC	ENSMUSG00000026623.17	novel	2792	8	NA	NA	-121	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	33.6833998962609	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGTGGCCTTGTTCTTAA	NA	False	NA	9	True	AATAAA	-18	NA	191450379	191516367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_191450710_191451469_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
m54284U_201203_174622/68945883/ccs	chr7	+	1959	5	NIC	ENSMUSG00000070828.11	novel	1829	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	11.27774356864	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTTTGTTTTT	NA	False	NA	NA	False	NA	NA	NA	11131841	11136245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_11131924_11132016_11132147_11132578_11133051_11134886_11135047_11135130
m54284U_201203_174622/68946681/ccs	chr3	+	1843	12	ISM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	-23	950	0	0	5prime_fragment	FALSE	canonical	3	250	junction_3	91.6433979984058	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTTACACTTTAATGTGG	NA	False	NA	5	True	AATAAA	-19	NA	89072123	89083278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951
m54284U_201203_174622/69012226/ccs	chr7	+	3162	17	NIC	ENSMUSG00000030374.16	novel	3082	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	350	junction_8	56.0801602618965	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTCCAGGCCATCTG	NA	False	NA	16	True	AATAAA	-16	NA	16550241	16574856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
m54284U_201203_174622/69140519/ccs	chr19	+	3539	16	NNC	ENSMUSG00000024817.14	novel	3536	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	68.5372891205948	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACGCATCCAGCTTT	4085	False	NA	25	True	AATAAA	-15	NA	30007912	30071122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051290_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
m54284U_201203_174622/69140559/ccs	chr11	-	3158	6	NIC	ENSMUSG00000020775.14	novel	1411	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	763	junction_5	24.8724747461928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATATGTCTTCACTTT	486	False	NA	-6	True	AATAAA	-16	NA	116029615	116022646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116022957_116023245_116023383_116023568_116025128_116025258_116026152_116029267_116029448_116029536
m54284U_201203_174622/69141634/ccs	chr8	-	1413	16	NIC	ENSMUSG00000070003.8	novel	1475	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_14	408.922193088123	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTACTGCTGATGTCT	NA	False	NA	-10	True	AATAAA	-17	NA	71060964	71050139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055223_71055297_71060774
m54284U_201203_174622/69271631/ccs	chr2	+	190	1	Intergenic	novelGene_825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATCCCTATTTGTGTGA	NA	False	NA	NA	False	NA	NA	NA	69468587	69468777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69468600_69468800
m54284U_201203_174622/69273037/ccs	chr16	+	2976	19	NIC	ENSMUSG00000022779.17	novel	3073	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	114.410472304066	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGGGACCTTTTACTG	NA	False	NA	NA	False	ATTAAA	-32	NA	16688828	16710854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_16688920_16692932_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
m54284U_201203_174622/69337930/ccs	chr12	-	4217	2	NNC	ENSMUSG00000099759.2	novel	1735	2	NA	NA	0	-6975	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCATGAGTCTCTTATT	NA	False	NA	-5	True	AATAAA	-45	NA	20865780	20861356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_20865068_20865274
m54284U_201203_174622/69403509/ccs	chr8	+	4232	11	NIC	ENSMUSG00000070002.8	novel	3072	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	95	junction_2	20.7173840047435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTCTGTGGTTTGAGTAT	NA	False	NA	8	True	AATAAA	-16	NA	70992337	71045508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
m54284U_201203_174622/69403518/ccs	chr10	-	3358	13	NIC	ENSMUSG00000042570.15	novel	2676	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_12	52.1999361430005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGTGTCTCATGGATTCC	NA	False	NA	-4	True	ATTAAA	-15	NA	79390718	79376079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_79377034_79377347_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390379
m54284U_201203_174622/69403519/ccs	chr4	+	2783	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	159.081611708184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5272	False	NA	21	True	NA	NA	NA	108436650	108472030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108436773_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
m54284U_201203_174622/69405339/ccs	chr7	+	181	1	Antisense	novelGene_ENSMUSG00000036864.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGCATACAAATG	NA	False	NA	NA	False	NA	NA	NA	30250988	30251169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_30251000_30251200
m54284U_201203_174622/69405407/ccs	chr4	+	2591	15	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_2	108.089532049942	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGGTTTGTTCCAAGAG	NA	False	NA	8	True	AATAAA	-20	NA	119090111	119105569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_119090628_119092442_119092596_119093970_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
m54284U_201203_174622/69469166/ccs	chr2	+	3708	19	NIC	ENSMUSG00000027298.18	novel	3529	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	57.453819351064	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTTTTGTTTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	119629807	119648585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_119629897_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
m54284U_201203_174622/69470919/ccs	chr19	-	1233	10	NNC	ENSMUSG00000042401.9	novel	2618	15	NA	NA	-19186	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_9	18.8325958557674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTTGTGGAAAACTAT	2505	False	NA	-17	True	AATAAA	-17	NA	42295579	42271970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_42272120_42272561_42272706_42275611_42275655_42276291_42276438_42286092_42286262_42286721_42286823_42287595_42287679_42290563_42290701_42293108_42293255_42295464
m54284U_201203_174622/69533878/ccs	chr11	-	4402	24	NIC	ENSMUSG00000004040.17	novel	4516	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	132.710523982853	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCAGTGGGGGCTGGCTGG	NA	False	NA	-4	True	AATAAA	-19	NA	100830305	100777635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100779587_100780303_100780367_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
m54284U_201203_174622/69535045/ccs	chr13	-	3362	9	NIC	ENSMUSG00000021556.13	novel	3954	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	169.338234017011	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTAGGGTTGTTTGGTGT	NA	False	NA	-5	True	AATAAA	-22	NA	59823625	59782809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_59785216_59786118_59786227_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
m54284U_201203_174622/69600668/ccs	chr5	+	3589	16	NIC	ENSMUSG00000023353.15	novel	1770	9	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	43.4855787078378	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	False	NA	21	True	AATAAA	-27	NA	24679131	24707045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_24680181_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
m54284U_201203_174622/69600720/ccs	chr7	-	2345	11	NNC	ENSMUSG00000066568.13	novel	2944	11	NA	NA	0	474	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	196.311512652722	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGTGTCCTTGCAGAAG	NA	False	NA	-1	True	AATAAA	-19	NA	34089112	34044665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_34045380_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
m54284U_201203_174622/69601772/ccs	chr1	+	176	1	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAAGCCGGGCGGTGGT	NA	False	NA	NA	False	NA	NA	NA	9833781	9833957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_9833800_9834000
m54284U_201203_174622/69666390/ccs	chr10	+	6238	17	NNC	ENSMUSG00000033444.15	novel	4725	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	60.4014887544173	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTCTCCCTCCCTGC	NA	False	NA	38	True	AATAAA	-21	NA	75047904	75148233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_75048052_75064588_75064766_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
m54284U_201203_174622/69666395/ccs	chr8	-	1476	11	NIC	ENSMUSG00000065954.12	novel	6471	11	NA	NA	0	-1598	combination_of_known_junctions	FALSE	canonical	3	13	junction_10	20.3492014585339	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCAGTATCAGCAGT	NA	False	NA	NA	False	NA	NA	NA	25730917	25649342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25730809
m54284U_201203_174622/69731032/ccs	chr7	-	3816	14	NIC	ENSMUSG00000059146.13	novel	3977	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_13	12.8509894169314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCATCAGACCTCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	78228156	77950437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_77952496_78005774_78005964_78100634_78100738_78101638_78101704_78103070_78103095_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227998
m54284U_201203_174622/69795866/ccs	chr7	-	2780	8	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	50.0611870512435	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCTTCACCCCTTCCAC	3262	False	NA	-24	True	AATAAA	-17	NA	45367326	45359708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45366682_45366833_45367124
m54284U_201203_174622/69796126/ccs	chr12	-	2856	5	NIC	ENSMUSG00000050671.13	novel	2526	6	NA	NA	-68	0	intron_retention	FALSE	canonical	3	77	junction_1	7.44983221287567	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATAAAGGATTTGGGG	7601	False	NA	1	True	AATAAA	-21	NA	87346547	87325411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_87326977_87329073_87329561_87331799_87332161_87333668_87333912_87346347
m54284U_201203_174622/69796830/ccs	chr6	-	3525	6	NIC	ENSMUSG00000057691.9	novel	3651	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	46.4137910539529	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1050	False	NA	2	True	AATAAA	-17	NA	48063527	48039328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_48041887_48044102_48044295_48059087_48059202_48060026_48060109_48060239_48060540_48063248
m54284U_201203_174622/69862400/ccs	chr12	+	2352	16	NIC	ENSMUSG00000021288.20	novel	2268	16	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	2	51	junction_12	36.3315595897317	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGTTCATAACTATTTT	NA	False	NA	NA	False	ATTAAA	-33	NA	111725334	111773160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755782_111755894_111761981_111762113_111772441_111772509_111772748
m54284U_201203_174622/69864274/ccs	chr11	-	2672	13	NIC	ENSMUSG00000004393.11	novel	1956	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	937	junction_7	74.5961348417821	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTGTCTGGCTCTG	4489	False	NA	-2	True	NA	NA	NA	6217772	6208918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
m54284U_201203_174622/69929124/ccs	chr5	-	3039	14	NIC	ENSMUSG00000029730.17	novel	2962	15	NA	NA	-77	0	intron_retention	FALSE	canonical	3	1644	junction_11	196.677220323257	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGAGTTTTTAGTATG	2243	False	NA	-8	True	AATAAA	-32	NA	138170157	138162844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_138163183_138163313_138163424_138164171_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
m54284U_201203_174622/69993829/ccs	chr11	-	7413	31	NNC	ENSMUSG00000020422.15	novel	7897	31	NA	NA	19638	0	at_least_one_novel_splicesite	TRUE	canonical	1	14	junction_30	15.8334736835885	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCATTTTTTTAAGTCT	3730	False	NA	NA	False	AATAAA	-24	NA	8555249	8381651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_8382706_8382750_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8555105
m54284U_201203_174622/69994602/ccs	chr5	-	4940	1	Genic_Genomic	ENSMUSG00000029624.11	novel	NA	NA	NA	NA	18627	4124	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTTGGTCTGATGT	NA	False	NA	NA	False	NA	NA	NA	145085139	145080199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_-_145080200_145085100
m54284U_201203_174622/69995146/ccs	chr6	-	5547	7	NIC	ENSMUSG00000002222.15	novel	6165	9	NA	NA	129	0	intron_retention	FALSE	canonical	0	0	junction_5	82.4029732473289	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGATACTCTCTGCT	NA	False	NA	NA	False	AATAAA	-27	NA	71417492	71365870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71406001_71406145_71416981
m54284U_201203_174622/70060389/ccs	chr14	-	4402	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	145	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_7	237.484294071325	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434728	52397870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
m54284U_201203_174622/70124535/ccs	chrX	-	1742	4	NIC	ENSMUSG00000067369.13	novel	3237	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_1	4.32049379893857	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTGTCTCCGCATT	NA	False	NA	-7	True	AGTAAA	-14	NA	133177676	133163236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_133164611_133167009_133167065_133168079_133168311_133177594
m54284U_201203_174622/70125391/ccs	chr2	-	2540	8	NIC	ENSMUSG00000027496.16	novel	1862	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1025	junction_7	145.890789459032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAGTACGTGGGTAATC	NA	False	NA	-8	True	AATATA	-16	NA	172212455	172198115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
m54284U_201203_174622/70126361/ccs	chrX	-	3999	3	NIC	ENSMUSG00000061273.4	novel	4234	4	NA	NA	131	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	65	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTGTTTGGTAGTGG	NA	False	NA	-7	True	AATAAA	-14	NA	55643298	55630871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_55634664_55640749_55640803_55643144
m54284U_201203_174622/7013543/ccs	chr8	+	4398	32	ISM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	1438	0	0	0	3prime_fragment	FALSE	canonical	1	71	junction_27	44.5244031581209	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGTGCTGTCTTTGGGT	NA	False	NA	17	True	AATAAA	-21	NA	3566862	3594267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
m54284U_201203_174622/70189405/ccs	chr19	+	188	1	Intergenic	novelGene_9129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCAGGTTCAATTCCCA	4877	False	NA	NA	False	NA	NA	NA	6985506	6985694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6985500_6985700
m54284U_201203_174622/70189746/ccs	chr11	-	3188	15	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	249	junction_14	395.431726091875	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606008_106615196
m54284U_201203_174622/70191042/ccs	chr11	+	3296	7	NNC	ENSMUSG00000038366.16	novel	758	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	224.925913728647	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	False	NA	10	True	AATAAA	-21	NA	97697135	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97697190_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
m54284U_201203_174622/70254769/ccs	chr5	-	5297	28	NNC	ENSMUSG00000029512.12	novel	5213	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_27	255.77541803676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTGTCAATTTCATCC	NA	False	NA	-2	True	AATAAA	-15	NA	110957963	110932353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938821_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957413
m54284U_201203_174622/70255666/ccs	chr1	-	6690	42	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	154	junction_39	264.060432396011	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
m54284U_201203_174622/70255809/ccs	chr9	-	3743	29	NIC	ENSMUSG00000032570.18	novel	4876	28	NA	NA	0	535	combination_of_known_junctions	FALSE	canonical	1	1	junction_27	128.611184329723	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTGTTTTTTGGTTTTTT	NA	False	NA	-11	True	AGTAAA	-27	NA	105372332	105289586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105370741_105370754_105371613_105371682_105372091
m54284U_201203_174622/70256237/ccs	chr7	-	144	1	Intergenic	novelGene_4000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATGGGGAAGAGGT	NA	False	NA	-1	True	NA	NA	NA	105451726	105451582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_105451600_105451700
m54284U_201203_174622/70322957/ccs	chr10	+	1976	12	NIC	ENSMUSG00000069565.13	novel	598	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	294.159932886351	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGCTGTCTGCTTGT	NA	False	NA	12	True	AATAAA	-21	NA	80097319	80124242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80097410_80109840_80109882_80110281_80110449_80110637_80110704_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
m54284U_201203_174622/70385856/ccs	chr3	-	4015	9	NIC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	2549	junction_5	105.468004626996	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352525	108333927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_108334298_108334575_108335648_108335921_108336052_108336556_108336779_108338780_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
m54284U_201203_174622/70452027/ccs	chr9	+	2037	3	NIC	ENSMUSG00000042138.10	novel	2591	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	110.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATTAAA	395	False	NA	NA	False	TTTAAA	-7	NA	37400614	37435446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_37401130_37430022_37430084_37433985
m54284U_201203_174622/70585111/ccs	chr7	+	854	6	NNC	ENSMUSG00000059070.17	novel	1027	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	3321.2486447118	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGATGGTCCTCTGTG	5963	False	NA	4	True	AATAAA	-11	NA	45367535	45370247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_45367792_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
m54284U_201203_174622/70779260/ccs	chr8	+	2565	6	NNC	ENSMUSG00000031885.15	novel	395	2	NA	NA	-135	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	72.45798782743	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGACTCTTTATTGATA	3611	False	NA	82	True	ATTAAA	-22	NA	105897170	105944621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_105897202_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
m54284U_201203_174622/7079939/ccs	chr9	+	1963	8	NNC	ENSMUSG00000032387.16	novel	1987	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	571.165725262192	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTGATTTTTGCTTCTA	NA	False	NA	16	True	AATAAA	-16	NA	65537840	65567810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_65538180_65556630_65556709_65557248_65557288_65557869_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
m54284U_201203_174622/7080261/ccs	chr8	+	5102	12	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	45.1189428983488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGGTGGTAATTTATA	NA	False	NA	7	True	AATAAA	-17	NA	94763887	94794549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_94764071_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
m54284U_201203_174622/70911032/ccs	chr1	+	2947	15	NIC	ENSMUSG00000039748.12	novel	7796	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	122.914459221502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGCTAATTGGACAA	9766	False	NA	17	True	AATAAA	-25	NA	175708359	175736310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_175708423_175708697_175708921_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721356_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
m54284U_201203_174622/70912778/ccs	chr19	-	173	1	Intergenic	novelGene_9204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29630102	29629929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_29629900_29630100
m54284U_201203_174622/70976404/ccs	chr2	+	8386	35	NNC	ENSMUSG00000036202.17	novel	8509	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_16	133.152395974061	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTAGTGCCTGCCTT	NA	False	NA	24	True	ATTAAA	-19	NA	51962843	52012395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983578_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
m54284U_201203_174622/70978065/ccs	chr7	+	2048	5	NIC	ENSMUSG00000061286.8	novel	1020	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1215	junction_4	52.4517635547176	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCGGTGTCTGGAGAGTAC	NA	False	NA	31	True	ATTAAA	-43	NA	25358636	25367457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_25358809_25362561_25363874_25364845_25364987_25365677_25365768_25367124
m54284U_201203_174622/71043090/ccs	chr4	-	166	1	Intergenic	novelGene_2183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	131877387	131877221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_131877200_131877400
m54284U_201203_174622/71043775/ccs	chr4	+	2823	13	NIC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	0	1145	intron_retention	FALSE	canonical	3	246	junction_9	29.3005261613735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAAAAATCCTAATT	NA	False	NA	32	True	ATTAAA	-20	NA	62327033	62342713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340760_62340839_62340959_62341454
m54284U_201203_174622/71173645/ccs	chr11	-	232	2	Intergenic	novelGene_5716	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCATAATCACAACATG	1667	False	NA	NA	False	AATAAA	-9	NA	20087975	20087224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_20087398_20087916
m54284U_201203_174622/71174299/ccs	chr4	+	2587	19	NNC	ENSMUSG00000095567.9	novel	2785	19	NA	NA	0	-176	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	576.015123794077	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTTTTCGAG	NA	False	NA	29	True	GATAAA	-24	NA	156320466	156331884	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327975_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
m54284U_201203_174622/71240269/ccs	chr4	-	1414	8	NNC	ENSMUSG00000051557.16	novel	1243	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	118.182321962677	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTGTTTATTACT	9092	False	NA	NA	False	AATAAA	-14	NA	155976226	155973318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155973626_155973890_155974054_155974125_155974364_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
m54284U_201203_174622/71303506/ccs	chr12	+	2275	18	NIC	ENSMUSG00000071454.14	novel	2390	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	112.136872618653	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGTTCCTTCCG	NA	False	NA	27	True	AAAAAG	-7	NA	3622416	3831398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
m54284U_201203_174622/71368854/ccs	chr3	+	3854	19	NIC	ENSMUSG00000038777.20	novel	3933	20	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_2	24.8891989067994	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067804	95081335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95068024_95069925_95069975_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
m54284U_201203_174622/71435218/ccs	chr2	+	806	7	NNC	ENSMUSG00000010911.13	novel	919	7	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_6	133.735331490556	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGAAATTTTCTTGATGT	4667	False	NA	25	True	AATAAA	-21	NA	102904093	102922989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922223_102922809
m54284U_201203_174622/71435458/ccs	chr18	+	3086	12	NIC	ENSMUSG00000000420.16	novel	4108	13	NA	NA	0	-586	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	176.656972549665	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTCATTGTGACATT	NA	False	NA	9	True	ATTAAA	-37	NA	24339015	24419281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24339138_24365655_24365711_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
m54284U_201203_174622/71436744/ccs	chr12	-	1241	4	NNC	ENSMUSG00000020956.15	novel	2564	3	NA	NA	0	-1397	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_2	77.1895214535122	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCAGTTTTTCTTAA	NA	False	NA	-1	True	AATAAA	-16	NA	52053284	52045686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_52046657_52051079_52051154_52051661_52051732_52053157
m54284U_201203_174622/7144307/ccs	chr14	-	4624	25	NIC	ENSMUSG00000035726.9	novel	4673	26	NA	NA	145	0	intron_retention	FALSE	canonical	3	979	junction_20	83.921093891822	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTTATGACCATTT	NA	False	NA	-1	True	AATAAA	-40	NA	52434728	52397870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
m54284U_201203_174622/7146320/ccs	chr9	-	175	1	Intergenic	novelGene_4703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	35528258	35528083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_35528100_35528300
m54284U_201203_174622/71500981/ccs	chr11	+	1698	9	NIC	ENSMUSG00000000378.16	novel	1858	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	144.667506717991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTTGTCAAGCATTT	NA	False	NA	15	True	AAAACA	-27	NA	6496909	6546744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
m54284U_201203_174622/71501308/ccs	chr2	+	6676	14	NNC	ENSMUSG00000033411.17	novel	5053	13	NA	NA	0	1677	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	135.240613976124	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTTTGATGACATTT	NA	False	NA	12	True	NA	NA	NA	121786960	121845800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
m54284U_201203_174622/71501748/ccs	chr7	-	187	1	Intergenic	novelGene_3819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAGTACAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	42919702	42919515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_42919500_42919700
m54284U_201203_174622/71566094/ccs	chr4	-	3231	16	NIC	ENSMUSG00000028849.18	novel	3351	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	46	junction_11	59.2617545770926	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCTTGGATCTG	NA	False	NA	0	True	AATAAA	-21	NA	126150076	126125959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
m54284U_201203_174622/71568074/ccs	chr1	+	1721	1	FSM	ENSMUSG00000059647.6	ENSMUST00000081455.6	552	1	-91	-1078	-91	1078	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTAG	NA	False	NA	NA	False	AATAAA	-17	NA	58685755	58687476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_58685800_58687500
m54284U_201203_174622/71631916/ccs	chr11	-	4149	17	NIC	ENSMUSG00000061306.17	novel	4578	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	178.949320688848	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996863_119997259_119997437_119999292_119999380_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
m54284U_201203_174622/71631962/ccs	chrX	+	1731	8	NIC	ENSMUSG00000073125.11	novel	2384	8	NA	NA	0	-659	intron_retention	FALSE	canonical	3	856	junction_4	287.08421576042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGTGCAAATATGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	72235816	72245867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241992_72243351_72243451_72245455_72245552_72245645
m54284U_201203_174622/71633105/ccs	chr9	-	185	1	Intergenic	novelGene_5133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAACTGAGAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	114699292	114699107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_114699100_114699300
m54284U_201203_174622/71697626/ccs	chr19	-	1151	9	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	101.258873067993	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTTCTTCTATC	9953	False	NA	-1	True	AATAAA	-14	NA	6117880	6112851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116594_6116997_6117053_6117698
m54284U_201203_174622/71697914/ccs	chr18	-	3004	24	NNC	ENSMUSG00000024376.8	novel	3566	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_19	47.5448251335035	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATGTGGGCTGTCCCAG	NA	False	NA	38	True	NA	NA	NA	34140019	33929969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013319_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
m54284U_201203_174622/71699079/ccs	chr11	+	1938	14	NIC	ENSMUSG00000020385.17	novel	1949	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	49.8634822681421	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGATTGAGTATTCT	NA	False	NA	15	True	AGTAAA	-15	NA	51154012	51172593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_51154097_51157997_51158159_51161363_51161423_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
m54284U_201203_174622/71762282/ccs	chr3	+	4629	14	NNC	ENSMUSG00000039068.17	novel	7539	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	58.1423472554961	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTTGTTGTGGATTCC	NA	False	NA	20	True	AATAAA	-29	NA	152102330	152165114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_152102838_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
m54284U_201203_174622/71763975/ccs	chr15	+	2885	13	NIC	ENSMUSG00000051934.6	novel	1275	8	NA	NA	115	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	101.953795362845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTAGCGCCGTCTCTCT	NA	False	NA	18	True	AATAAA	-23	NA	99023916	99111096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99024038_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
m54284U_201203_174622/71828095/ccs	chr1	-	171	1	Intergenic	novelGene_141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCAGAGGGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	59728930	59728759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59728800_59728900
m54284U_201203_174622/71828507/ccs	chr11	-	4881	12	NIC	ENSMUSG00000040548.17	novel	4934	12	NA	NA	0	57	combination_of_known_junctions	FALSE	canonical	2	3	junction_11	46.9919986155547	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTACTGCTTTAATT	9990	False	NA	-1	True	ATTAAA	-27	NA	106504249	106393161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106504040
m54284U_201203_174622/71828645/ccs	chr2	+	3911	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_9	74.8812665600192	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942946	128968514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
m54284U_201203_174622/71829170/ccs	chr6	-	3693	7	NNC	ENSMUSG00000057691.9	novel	3648	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	47.316017959625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTTCATGGATTCCAT	1050	False	NA	2	True	AATAAA	-17	NA	48063527	48039328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_48041884_48043362_48043489_48044102_48044295_48059087_48059202_48060026_48060154_48060239_48060540_48063248
m54284U_201203_174622/71830254/ccs	chr8	-	5126	1	Intergenic	novelGene_4217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6193	False	NA	NA	False	NA	NA	NA	18735385	18730259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_18730300_18735400
m54284U_201203_174622/71893092/ccs	chrX	+	1068	11	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	0	1702	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_10	388.218752767045	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTCATGGTATTTTA	NA	False	NA	16	True	NA	NA	NA	74460305	74499309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466505_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74499161
m54284U_201203_174622/71895392/ccs	chr10	-	187	1	Intergenic	novelGene_5439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACTGTTTTATTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	79673783	79673596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_79673600_79673800
m54284U_201203_174622/71895663/ccs	chr15	-	4898	15	NIC	ENSMUSG00000033228.9	novel	5766	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	76.3346552480375	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAATGGGATGTGCGT	NA	False	NA	-3	True	AATAAA	-22	NA	96358724	96312452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
m54284U_201203_174622/71960432/ccs	chr3	-	1676	5	ISM	ENSMUSG00000038256.16	ENSMUST00000046521.14	6102	10	-52	10822	-52	0	5prime_fragment	FALSE	canonical	3	19	junction_4	10.0343161201947	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAAAACA	NA	False	NA	NA	False	ATTAAA	-28	NA	97134732	97121799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_-_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97134533
m54284U_201203_174622/71961266/ccs	chr2	-	2085	12	NIC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	28	junction_7	85.6295114031401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	59	True	ATTAAA	-23	NA	73605690	73442679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
m54284U_201203_174622/72025090/ccs	chr9	+	3013	6	NIC	ENSMUSG00000037405.9	novel	2535	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	355	junction_3	37.2150507187616	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGAGTTTGTGTACAG	NA	False	NA	16	True	AATAAA	-21	NA	20927280	20940113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20927398_20930214_20930476_20936839_20937155_20937607_20938632_20938727_20938977_20939066
m54284U_201203_174622/72091642/ccs	chr5	+	200	1	Intergenic	novelGene_2591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGCTCTCTTTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	65841823	65842023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_65841800_65842000
m54284U_201203_174622/721374/ccs	chr11	+	3476	14	NIC	ENSMUSG00000038335.14	novel	3389	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	655	junction_7	78.033978337311	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTCTGGATTCTAGTA	NA	False	NA	26	True	AATAAA	-18	NA	74788923	74800168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74789042_74789202_74789307_74790007_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
m54284U_201203_174622/72288078/ccs	chr13	+	7745	24	NNC	ENSMUSG00000021488.9	novel	426	5	NA	NA	-273	-1705	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	51.0281067144199	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGGGCTCTCAAGGCT	NA	False	NA	57	True	NA	NA	NA	55358274	55461863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55358348_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
m54284U_201203_174622/72288649/ccs	chr6	-	5323	25	NIC	ENSMUSG00000040029.16	novel	5360	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_24	47.3309858572819	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGAACTCTGTCTGCTC	NA	False	NA	-9	True	AATAAA	-19	NA	148732965	148672188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725955_148732661
m54284U_201203_174622/72288692/ccs	chr2	-	1418	5	NIC	ENSMUSG00000072980.4	novel	1082	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_3	272.52247613729	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGAATT	7480	False	NA	NA	False	NA	NA	NA	119448950	119439992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_119440846_119442232_119442337_119443492_119443575_119448334_119448402_119448638
m54284U_201203_174622/723358/ccs	chr11	+	4738	21	NIC	ENSMUSG00000020694.18	novel	3699	22	NA	NA	73	0	intron_retention	FALSE	canonical	3	204	junction_5	60.6110550972345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTCCTGGATTCTCTGAT	NA	False	NA	26	True	AATAAA	-19	NA	105072425	105173003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
m54284U_201203_174622/72354183/ccs	chr19	+	2310	15	NIC	ENSMUSG00000025217.16	novel	361	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	170.829264925838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	False	NA	17	True	TATAAA	-19	NA	45352525	45517732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_45352714_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
m54284U_201203_174622/72417508/ccs	chr5	-	3612	4	NNC	ENSMUSG00000063406.12	novel	3800	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	113.291168627077	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGTTACCTACTCC	NA	False	NA	0	True	AATAAA	-31	NA	108280415	108269492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_108272626_108273883_108273951_108277883_108277982_108280101
m54284U_201203_174622/72417683/ccs	chr1	+	3832	15	NIC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	37.6449579245728	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTATCCATATTGTTA	NA	False	NA	94	True	ATTAAA	-40	NA	44187068	44220420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_44187298_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218306_44218392_44219690
m54284U_201203_174622/72417925/ccs	chr9	-	4819	8	NIC	ENSMUSG00000025786.18	novel	5376	7	NA	NA	0	-642	combination_of_known_junctions	FALSE	canonical	3	31	junction_6	123.273050168961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGGTCCAGCTTTCA	8738	False	NA	NA	False	AATAAA	-13	NA	122942245	122895866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122927987_122928040_122929327_122929658_122942060
m54284U_201203_174622/72483932/ccs	chr10	+	2705	3	NNC	ENSMUSG00000053684.9	novel	3123	3	NA	NA	0	-3297	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	69	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAGTATATTTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	121575842	121584991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_121576116_121581235_121581522_121582845
m54284U_201203_174622/72549661/ccs	chr1	-	8071	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	0	intron_retention	FALSE	canonical	3	134	junction_13	462.096137608357	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692359	71624681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
m54284U_201203_174622/72614340/ccs	chr7	+	3365	15	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3333	junction_5	353.02841418856	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201203_174622/72614929/ccs	chr8	-	676	5	NNC	ENSMUSG00000050914.17	novel	884	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_4	13.6083614002568	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAATTTCTGTGCAT	NA	False	NA	NA	False	ATTAAA	-13	NA	46452904	46449947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452895
m54284U_201203_174622/72745721/ccs	chr4	+	4277	21	ISM	ENSMUSG00000028830.15	ENSMUST00000102608.10	4073	24	-11	15734	0	0	5prime_fragment	FALSE	canonical	2	17	junction_1	12.2363188909083	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGCTATGAGGTTGTG	NA	False	NA	18	True	ATTAAA	-18	NA	126647336	126748129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_126647456_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
m54284U_201203_174622/72746367/ccs	chr2	-	166	1	Intergenic	novelGene_676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTAACAACAACAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	29984940	29984774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29984800_29984900
m54284U_201203_174622/72746849/ccs	chr3	-	701	5	NIC	ENSMUSG00000074489.10	novel	2051	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	35.14612354158	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGGGCTGGAGTCTGTC	7128	False	NA	NA	False	AATAAA	-15	NA	88280050	88275926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_88276196_88276401_88276460_88276602_88276636_88276779_88276916_88279845
m54284U_201203_174622/7274888/ccs	chr5	+	3375	5	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	2504	junction_1	214.607053705138	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296340	122313332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122311344_122312117
m54284U_201203_174622/7275352/ccs	chr9	+	3223	20	NIC	ENSMUSG00000032178.15	novel	3513	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_18	523.383044847986	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTCTCAGGCCTGG	NA	False	NA	116	True	AATAAA	-14	NA	21279166	21316657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21315355_21315488_21315991
m54284U_201203_174622/7275977/ccs	chrX	-	6693	30	NIC	ENSMUSG00000064127.14	novel	6963	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_10	22.6367163578842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACTCTCTTTGGTGAAG	NA	False	NA	-3	True	AATAAA	-28	NA	12628312	12541607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
m54284U_201203_174622/72810807/ccs	chr5	+	4925	28	NNC	ENSMUSG00000029577.14	novel	5194	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	57.3485002428986	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTGTTCTGGTTTCTA	NA	False	NA	20	True	ATTAAA	-20	NA	114518893	114559229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_114519037_114522375_114522464_114525196_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
m54284U_201203_174622/72811538/ccs	chr2	+	2019	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	170	junction_12	786.810487382798	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
m54284U_201203_174622/72941570/ccs	chr8	-	179	1	Intergenic	novelGene_4211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTTCCCAGGCTA	NA	False	NA	NA	False	NA	NA	NA	13998331	13998152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_13998200_13998300
m54284U_201203_174622/72941774/ccs	chr14	+	181	1	Intergenic	novelGene_7506	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACAGGCTAACAGAACAG	NA	False	NA	NA	False	NA	NA	NA	62757072	62757253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_62757100_62757300
m54284U_201203_174622/72941834/ccs	chr5	-	2338	9	NIC	ENSMUSG00000023452.20	novel	2183	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	32	junction_5	306.610909786328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCGTAGCTTTGTATTT	NA	False	NA	NA	False	ATTAAA	-15	NA	32942983	32893648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32922116_32922293_32931739_32931811_32942892
m54284U_201203_174622/72944444/ccs	chr2	-	3848	6	NIC	ENSMUSG00000026927.18	novel	2193	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	96	junction_5	107.581411033691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTGTCTTGTCATTT	NA	False	NA	-3	True	AATAAA	-13	NA	26279328	26272813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26273707_26274693_26274834_26275094_26277324_26277567_26277684_26278503_26278573_26278927
m54284U_201203_174622/73007543/ccs	chr8	+	3790	12	NIC	ENSMUSG00000005698.16	novel	3782	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	229	junction_10	67.2234463229697	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGACTCCGTCTTTT	NA	False	NA	38	True	AATAAA	-21	NA	106363199	106409554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
m54284U_201203_174622/73008651/ccs	chr5	-	8904	49	NIC	ENSMUSG00000029478.17	novel	8808	48	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	21.0932844598833	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGTTTCTACTCTGCTTC	NA	False	NA	-7	True	AATATA	-10	NA	125256283	125094225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
m54284U_201203_174622/73009203/ccs	chr14	+	1026	10	NNC	ENSMUSG00000022111.10	novel	903	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_6	1781.07901821783	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGTTTTTGCTAC	117	False	NA	22	True	AATAAA	-18	NA	101891429	101933561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101911571_101911695_101928007_101928084_101932594_101932654_101933337
m54284U_201203_174622/73072917/ccs	chr11	-	3560	28	NIC	ENSMUSG00000040594.20	novel	5001	28	NA	NA	0	-1410	combination_of_known_splicesites	FALSE	canonical	3	41	junction_15	49.7087263565917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTTTCAAGTCTATCT	NA	False	NA	0	True	NA	NA	NA	33463746	33163204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_33163499_33167291_33167420_33169170_33169270_33193109_33193277_33214635_33214775_33216109_33216325_33233907_33233991_33239563_33239672_33247341_33247431_33252766_33252871_33268238_33268348_33268427_33268492_33278443_33278525_33279470_33279545_33287854_33287915_33391802_33391939_33402443_33402550_33424886_33425081_33428163_33428337_33429142_33429290_33431021_33431142_33433005_33433080_33435917_33436084_33437642_33437748_33441326_33441393_33443250_33443418_33454681_33454829_33463601
m54284U_201203_174622/73075366/ccs	chr1	-	2201	12	NNC	ENSMUSG00000037351.10	novel	3248	11	NA	NA	0	-1090	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	209.343681202715	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCGGTGTGTGGCTCT	NA	False	NA	-21	True	TATAAA	-24	NA	36749028	36738284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745625_36745730_36745950_36746027_36747271_36747337_36748886
m54284U_201203_174622/73204866/ccs	chr8	-	1754	5	NIC	ENSMUSG00000040459.12	novel	970	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	456.383815992636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTTAAGCAATTTTTAT	5255	False	NA	-11	True	AATAAA	-35	NA	8740521	8716575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_8717417_8731383_8731468_8731890_8731949_8733747_8733974_8739976
m54284U_201203_174622/73206042/ccs	chr8	-	3491	16	NIC	ENSMUSG00000052488.8	novel	3713	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	148.970541457774	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	False	NA	-12	True	AATAAA	-10	NA	73229005	73214332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
m54284U_201203_174622/73335584/ccs	chr4	-	4624	29	NIC	ENSMUSG00000040964.17	novel	4508	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	60.6741884400372	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	False	NA	-2	True	AATAAA	-18	NA	140376067	140241795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279106_140279232_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140314094_140314212_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
m54284U_201203_174622/73336612/ccs	chr16	+	1864	11	NIC	ENSMUSG00000022884.17	novel	1238	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_10	768.532133355529	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_22926571_22927334_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100_22931208_22931916
m54284U_201203_174622/73403148/ccs	chr5	+	179	1	Intergenic	novelGene_3091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGAGTTTTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	149924167	149924346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_149924200_149924300
m54284U_201203_174622/7340809/ccs	chr6	-	3672	19	NIC	ENSMUSG00000030309.17	novel	3697	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_18	20.5087304505022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTTGTTTCTGTTTG	NA	False	NA	-1	True	AATAAA	-14	NA	148797660	148743989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796705_148797515
m54284U_201203_174622/7340918/ccs	chr16	+	6380	18	NIC	ENSMUSG00000039473.9	novel	6455	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	23.2710818956738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTCCTCATTTTTTCA	NA	False	NA	21	True	AATAAA	-21	NA	4867920	4904153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_4868646_4871591_4871706_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4901919
m54284U_201203_174622/7341961/ccs	chr7	-	3348	12	NIC	ENSMUSG00000054753.10	novel	3449	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	34.6786904344431	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGACTTTATTTTTCTGTG	9604	False	NA	87	True	NA	NA	NA	3218931	3204497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214125_3218840
m54284U_201203_174622/73465956/ccs	chr5	+	2529	13	NIC	ENSMUSG00000063646.19	novel	2496	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	99	junction_1	26.6327909832138	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTTTTTTATTTGTG	NA	False	NA	17	True	AATAAA	-20	NA	37185678	37282643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
m54284U_201203_174622/73466670/ccs	chr5	+	740	5	NNC	ENSMUSG00000060152.15	novel	1587	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	310.758246069191	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGTGCACTTGCCTT	NA	False	NA	11	True	AATAAA	-13	NA	115376090	115379025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378700
m54284U_201203_174622/73468277/ccs	chr2	-	6139	28	NNC	ENSMUSG00000043909.17	novel	9621	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_19	35.5470282984454	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATGTCTTCATCTGTT	8072	False	NA	-5	True	AATAAA	-26	NA	121101888	121028731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078008_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
m54284U_201203_174622/73531739/ccs	chr9	-	3987	1	Genic_Genomic	ENSMUSG00000047193.17	novel	NA	NA	NA	NA	-41	-31026	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAACCACTTTGTGAAC	-8	True	NA	NA	False	AATAAA	-24	NA	7184487	7180500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_-_7180500_7184500
m54284U_201203_174622/73531747/ccs	chr8	+	3132	13	NIC	ENSMUSG00000031826.21	novel	3274	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_11	422.358556205506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTCTTGGTGTGCT	8827	False	NA	39	True	AATAAA	-21	NA	120637552	120684299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120682936_120683003_120683321
m54284U_201203_174622/73532992/ccs	chr6	+	9777	59	NIC	ENSMUSG00000030102.12	novel	9870	62	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_26	15.3465709974349	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTGACTGGCTGGTGG	NA	False	NA	4	True	AATAAA	-15	NA	108190056	108528070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365327_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
m54284U_201203_174622/73534050/ccs	chr4	-	1389	4	NNC	ENSMUSG00000038544.15	novel	1654	3	NA	NA	0	-142	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	109.77552854196	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGGTTATTCAGTTTG	-11	True	NA	-3	True	NA	NA	NA	59783849	59774229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_59775313_59775446_59775550_59782253_59782335_59783727
m54284U_201203_174622/73597873/ccs	chr19	+	3410	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	187	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384488	38394058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_38384750_38388884_38389063_38391087
m54284U_201203_174622/73598307/ccs	chr2	+	5622	18	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9573	-11	-171	0	3prime_fragment	FALSE	canonical	3	69	junction_16	36.8251268212062	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCTTTCCTGCCTGACT	4625	False	NA	33	True	AATAAA	-25	NA	20524430	20815346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20812712_20812836_20813520
m54284U_201203_174622/73664635/ccs	chr11	-	2202	15	NIC	ENSMUSG00000009079.17	novel	2588	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_8	1394.9617506277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCCTCCTCCTCTGTTCTC	NA	False	NA	-13	True	AATAAA	-23	NA	5049096	5019688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
m54284U_201203_174622/73795968/ccs	chr3	+	2775	16	NIC	ENSMUSG00000063052.10	novel	2701	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	275.5638744264	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_157742514_157746077_157746260_157747222_157747297_157747499_157747571_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201203_174622/73924872/ccs	chr19	+	3347	8	NIC	ENSMUSG00000024947.18	novel	2652	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	360	junction_3	17.111876768216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	639	False	NA	12	True	GATAAA	-12	NA	6385093	6390910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388992_6389368_6389534_6389716
m54284U_201203_174622/73927424/ccs	chr3	-	2788	7	NIC	ENSMUSG00000074513.10	novel	2799	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	62.7986199423735	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTGCCCTGTCCTTAT	NA	False	NA	-3	True	ATTAAA	-16	NA	84489932	84403399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84489720
m54284U_201203_174622/73991110/ccs	chr4	+	3708	8	NIC	ENSMUSG00000028381.9	novel	4012	9	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	89.7424887425922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGAGTAATGGACTGGCTT	-24	True	NA	NA	False	AATAAA	-19	NA	59189473	59222833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59219488_59219679_59220222
m54284U_201203_174622/73992076/ccs	chr9	+	4424	26	NIC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	163.052806170271	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290869	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_44290974_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
m54284U_201203_174622/7405634/ccs	chr2	+	6253	14	ISM	ENSMUSG00000026883.18	ENSMUST00000091010.12	6455	16	39313	-7	0	0	3prime_fragment	FALSE	canonical	3	179	junction_9	30.3936695370762	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551361	35621006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
m54284U_201203_174622/74058190/ccs	chr4	-	1418	9	NIC	ENSMUSG00000028688.14	novel	2090	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	38.7021882456277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTATTTCTTATC	1939	False	NA	0	True	TTTAAA	-42	NA	116664837	116661198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116661334_116662005_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
m54284U_201203_174622/7406627/ccs	chr7	+	3006	16	NNC	ENSMUSG00000061079.15	novel	3003	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	70.5686112155319	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTTGTTTGTTTCATT	NA	False	NA	19	True	AATACA	-17	NA	109660916	109694601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_109660983_109668694_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
m54284U_201203_174622/7407029/ccs	chr4	+	3827	10	NIC	ENSMUSG00000028248.16	novel	4545	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	402	junction_3	31.0876895964374	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-1	True	NA	13	True	AATAAA	-25	NA	21848057	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873585
m54284U_201203_174622/7407096/ccs	chr4	-	4258	28	NIC	ENSMUSG00000066151.13	novel	4264	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	24.7540992988791	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTGTGTTCCTTTTTGGG	6970	False	NA	-1	True	NA	NA	NA	62278731	62218578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239225_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
m54284U_201203_174622/7408225/ccs	chr7	-	7679	23	NIC	ENSMUSG00000030583.17	novel	7713	23	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_5	15.2732683886825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGTGTTCTCCTGCAGC	NA	False	NA	-1	True	AATAAA	-17	NA	29217985	29019796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031372_29031469_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29134173_29134251_29217889
m54284U_201203_174622/74187785/ccs	chr6	-	2815	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-964	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	258.951618702032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113520	148081540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148083238_148083385_148083469_148084586_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
m54284U_201203_174622/74252996/ccs	chr5	-	3355	19	NIC	ENSMUSG00000106864.4	novel	4552	19	NA	NA	0	236	combination_of_known_junctions	FALSE	canonical	3	21	junction_18	147.57426462716	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTGGGTGTTTGGA	NA	False	NA	0	True	AGTAAA	-24	NA	31337255	31314551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31336988
m54284U_201203_174622/74318354/ccs	chr2	-	5560	1	NIC	ENSMUSG00000026970.17	novel	1806	15	NA	NA	0	12301	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGGATCACACAAAAGAA	NA	False	NA	NA	False	AGTAAA	-12	NA	60711814	60706254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_60706300_60711800
m54284U_201203_174622/74385162/ccs	chr11	-	2127	12	NIC	ENSMUSG00000069631.15	novel	2099	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	47.5345894069008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGAATGGCACCAGTG	NA	False	NA	-13	True	ATTAAA	-13	NA	106084398	106054155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
m54284U_201203_174622/74385165/ccs	chr16	+	1851	10	NNC	ENSMUSG00000002845.15	novel	1645	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_4	281.273690360277	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGGTTGCCCCTTCA	7070	False	NA	-15	True	NA	NA	NA	38379059	38411708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_38379125_38384476_38384664_38393415_38393639_38396104_38396189_38399005_38399056_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
m54284U_201203_174622/74385276/ccs	chr14	+	1176	10	NIC	ENSMUSG00000022204.10	novel	1200	11	NA	NA	101	0	intron_retention	FALSE	canonical	3	1001	junction_1	184.940230585151	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTTTTGCCATACAT	NA	False	NA	18	True	AATAAA	-23	NA	55253011	55261594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
m54284U_201203_174622/74385896/ccs	chr14	-	1579	5	NNC	ENSMUSG00000071470.5	novel	1509	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	80.7971998277168	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCTTTTTGGC	8876	False	NA	1	True	AATAAA	-20	NA	51033185	51026704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_51027470_51027592_51027663_51029429_51029764_51031014_51031332_51033092
m54284U_201203_174622/74385905/ccs	chr1	-	3043	8	NNC	ENSMUSG00000026484.14	novel	3201	8	NA	NA	0	-108	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_6	238.380762132983	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTTATCTAAGCAGAAA	NA	False	NA	-8	True	ATTAAA	-27	NA	151376562	151345264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151359481_151359617_151376469
m54284U_201203_174622/74449161/ccs	chr5	-	207	1	Intergenic	novelGene_2769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTAGAGCTGGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	110624141	110623934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_110623900_110624100
m54284U_201203_174622/74449831/ccs	chr16	+	1066	9	NIC	ENSMUSG00000022681.16	novel	1175	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	218.732963622313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTAGATGACTTTTTAC	NA	False	NA	NA	False	AATAAA	-23	NA	13637169	13653315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13649470_13649525_13650200_13650299_13652544_13652659_13652998
m54284U_201203_174622/74450498/ccs	chr5	+	4264	4	NNC	ENSMUSG00000046079.17	novel	3929	3	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	254.10802602218	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4968	False	NA	19	True	AATAAA	-30	NA	105848731	105963076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_105848952_105862914_105863327_105880095_105880241_105959589
m54284U_201203_174622/74514950/ccs	chr8	-	3719	25	NIC	ENSMUSG00000031959.16	novel	5083	26	NA	NA	0	-109	intron_retention	FALSE	canonical	3	54	junction_4	5.6856300344719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCAGCATTCTTTTTCTT	NA	False	NA	-1	True	TATAAA	-35	NA	112248724	112176948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
m54284U_201203_174622/74516833/ccs	chr2	+	6187	14	NIC	ENSMUSG00000026883.18	novel	6219	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_9	57.3698681813714	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGACTTGCCTTTCTTCA	NA	False	NA	11	True	ATTAAA	-21	NA	35551361	35621006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609930_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
m54284U_201203_174622/74645577/ccs	chr18	+	2182	20	NIC	ENSMUSG00000024287.9	novel	4134	21	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_16	182.404257130667	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTACAGTTGGCTGG	10	True	NA	14	True	AATAAA	-14	NA	9958176	9993725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_9958247_9959097_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
m54284U_201203_174622/74713060/ccs	chr10	+	889	11	NIC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	1288	junction_2	1269.59119798461	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657800	128713498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128657841_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
m54284U_201203_174622/74713812/ccs	chr8	-	1953	10	NIC	ENSMUSG00000052926.17	novel	1532	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9	junction_9	457.889387688801	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACCGAGTGCTTTGTGG	4713	False	NA	-8	True	AATAAA	-14	NA	85696210	85684295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695726
m54284U_201203_174622/7471782/ccs	chrX	+	3098	22	NIC	ENSMUSG00000031060.17	novel	3172	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	104.114689072799	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTCATGTCCTAGTAT	555	False	NA	41	True	AATAAA	-29	NA	20484021	20517140	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
m54284U_201203_174622/7471953/ccs	chr13	-	7604	5	ISM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	71978	4131	-95	-4131	3prime_fragment	FALSE	canonical	3	46	junction_3	18.280795934532	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTACCCCCGTTCATCT	4595	False	NA	-2	True	AATAGA	-19	NA	99581070	99562084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721
m54284U_201203_174622/7473509/ccs	chr4	-	2637	13	NNC	ENSMUSG00000028538.13	novel	2225	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_12	26.6691405102518	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGCCTCCTGTTGTTT	1862	False	NA	-7	True	AATAAA	-12	NA	117992111	117789356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_117790334_117797206_117797354_117797550_117797698_117814631_117814716_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745_117964891_117991600
m54284U_201203_174622/74843195/ccs	chr2	-	6778	34	NIC	ENSMUSG00000026980.16	novel	6901	35	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	144.096239903939	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATCTCCTTGGCTCAG	NA	False	NA	-11	True	AATAAA	-20	NA	60213647	60122446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_60124283_60129390_60129559_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163305_60164793_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
m54284U_201203_174622/74908453/ccs	chr8	-	3550	25	NIC	ENSMUSG00000039509.9	novel	5808	26	NA	NA	0	-2177	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	86.269190699165	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTCTGGATCAACCTG	NA	False	NA	-17	True	ATTAAA	-23	NA	124676004	124626038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_124626250_124629337_124629427_124631290_124631356_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
m54284U_201203_174622/74909165/ccs	chr9	+	4741	22	NNC	ENSMUSG00000042496.19	novel	6772	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_21	8.75776299624583	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGCATGTTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-10	NA	31191844	31293019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272258_31273626_31273796_31282119_31282224_31291755
m54284U_201203_174622/75038907/ccs	chr17	-	2867	12	NIC	ENSMUSG00000024335.21	novel	4520	14	NA	NA	-272	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_11	155.712067399686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTTTCTTAGTGAGAT	9933	False	NA	-9	True	AATAAA	-23	NA	34337735	34330996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335571_34335664_34337579
m54284U_201203_174622/75040763/ccs	chr5	-	7027	9	Fusion	ENSMUSG00000086291.2_ENSMUSG00000037224.16	novel	712	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	11	junction_3	7.31009575860672	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTTTTGATTATTCT	NA	False	NA	NA	False	AATAAA	-17	NA	34445793	34369153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr5_-_34371410_34371553_34375210_34382295_34382398_34389497_34389588_34390648_34390739_34391628_34391832_34393346_34393485_34400516_34400658_34445442
m54284U_201203_174622/75041356/ccs	chr3	+	4876	7	ISM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	349	0	347	0	3prime_fragment	FALSE	canonical	3	65	junction_1	8.35995746932297	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAGTTACTTACTGAT	NA	False	NA	NA	False	AATAAA	-20	NA	97565876	97581128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
m54284U_201203_174622/75104384/ccs	chr3	-	192	1	Intergenic	novelGene_1517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGAGAGGTGGAGTTAA	NA	False	NA	NA	False	NA	NA	NA	89128245	89128053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89128100_89128200
m54284U_201203_174622/75105965/ccs	chr3	+	4791	22	NNC	ENSMUSG00000028082.15	novel	7217	21	NA	NA	0	-636	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_21	34.9806554899047	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTCAGACTACACTGCA	NA	False	NA	9	True	AATAAA	-23	NA	85878415	86035781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901_86034021_86034394
m54284U_201203_174622/75171124/ccs	chr3	+	3912	26	NIC	ENSMUSG00000002428.13	novel	4955	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_25	37.5784193387641	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTCACTTAGTGACT	6947	False	NA	16	True	AATAAA	-20	NA	20111983	20172654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_20112172_20113062_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20128992_20129060_20130654_20130749_20136915_20136996_20137074_20137120_20137913_20137995_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735_20170908_20171941
m54284U_201203_174622/75235538/ccs	chrX	+	3842	4	NIC	ENSMUSG00000055555.2	novel	1427	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	124	junction_3	20.138409955991	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTTTACCTGTAGTT	NA	False	NA	NA	False	AATAAA	-18	NA	52726792	52740408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_52727016_52729333_52729516_52735693_52738355_52739632
m54284U_201203_174622/75236674/ccs	chr11	+	2660	11	NNC	ENSMUSG00000078652.10	novel	2664	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_2	417.222674359867	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTGGTGCTGTACTCTG	NA	False	NA	34	True	ATTAAA	-35	NA	101207038	101214363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_101207315_101208006_101208040_101208158_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
m54284U_201203_174622/75301731/ccs	chr17	+	2903	8	NIC	ENSMUSG00000024082.6	novel	1749	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	397	junction_1	39.3550038309058	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAACTAGTATCTCT	NA	False	NA	24	True	AATAAA	-33	NA	79244576	79254602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79251374_79252369_79252514_79253724_79253899_79254303
m54284U_201203_174622/75302616/ccs	chr11	+	7650	39	NNC	ENSMUSG00000010277.8	novel	7443	39	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	132.0980497087	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCCTTCCCTCCTCA	NA	False	NA	21	True	AGTAAA	-14	NA	78152577	78181449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78155093_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
m54284U_201203_174622/75368369/ccs	chr10	-	2743	21	NIC	ENSMUSG00000020263.15	novel	3020	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	21.7591360122593	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTATTGTGGTTAGTTT	NA	False	NA	0	True	AATAAA	-18	NA	83484539	83435896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_83436692_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
m54284U_201203_174622/7537314/ccschrUn	chrUn_JH584304v1	-	2159	8	Intergenic	novelGene_9760	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	149	junction_4	253.292442099029	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACAATCTTCTGTCTTCCC	NA	False	NA	-36	True	AATAAA	-19	NA	59716	52189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_54480_54720_54868_55111_55249_55511_55702_56985_57152_58563_58836_59591
m54284U_201203_174622/7537641/ccs	chr5	+	4169	11	NIC	ENSMUSG00000029578.16	novel	5171	12	NA	NA	0	-919	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	128.758883188695	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTCCCAGAGTCAAGTG	NA	False	NA	11	True	AATAAA	-12	NA	142615296	142655424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_142615588_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
m54284U_201203_174622/7539347/ccs	chr2	+	3102	19	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	64	junction_2	150.483295492298	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	656	False	NA	36	True	AATAAA	-37	NA	31462825	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31462966_31473166_31473273_31482477_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
m54284U_201203_174622/75433622/ccs	chr5	-	2191	10	NIC	ENSMUSG00000061979.9	novel	2321	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_9	114.237569224061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGACTTGATCATTTCTT	NA	False	NA	4	True	AATAAA	-42	NA	134205613	134176892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134205238
m54284U_201203_174622/75434155/ccs	chr15	-	2969	7	NNC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	169.259826565222	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79816969	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_79802252_79802523_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
m54284U_201203_174622/75499394/ccs	chr12	+	184	1	Intergenic	novelGene_6801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATGCATTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	84556728	84556912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_84556700_84556900
m54284U_201203_174622/75499608/ccs	chr3	+	3066	27	NNC	ENSMUSG00000027751.14	novel	2751	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	79	junction_23	123.457177013785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTGGTGTCTGTTCATTT	NA	False	NA	35	True	AATACA	-21	NA	54600243	54636184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624759_54625067_54625654_54625813_54627826_54627883_54629974_54630062_54633390_54633497_54634989_54635118_54635764
m54284U_201203_174622/75499793/ccs	chr9	-	7326	16	NNC	ENSMUSG00000037112.17	novel	4107	16	NA	NA	0	3157	intron_retention	FALSE	canonical	3	11	junction_8	13.1969693490589	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGTGATATGAATATCA	NA	False	NA	0	True	AATAAA	-20	NA	50920373	50800943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_50805382_50806643_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818797_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
m54284U_201203_174622/75499804/ccs	chr4	-	2448	13	NIC	ENSMUSG00000028803.19	novel	5153	12	NA	NA	0	374	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	20.9103576142436	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGCAGCTTTCTTCCT	4305	False	NA	-2	True	NA	NA	NA	135221817	135178822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_135179884_135182183_135182216_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
m54284U_201203_174622/75500106/ccs	chr17	-	5821	20	NIC	ENSMUSG00000024002.19	novel	5922	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	140	junction_5	48.2561838501388	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCTGTCTCCCTGAAAT	NA	False	NA	-4	True	AATAAA	-19	NA	32503696	32415247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418033_32418131_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
m54284U_201203_174622/75695083/ccs	chrX	+	4637	17	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	120.601600709734	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCGTTTGATTGTCCAT	NA	False	NA	18	True	AATAAA	-18	NA	13147260	13160291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_13147397_13150416_13150475_13151156_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
m54284U_201203_174622/75761422/ccs	chr17	+	1273	11	NIC	ENSMUSG00000001576.16	novel	2754	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	172.153884649752	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCACGTGTCTCTTTCCCTG	NA	False	NA	14	True	GATAAA	-16	NA	26780491	26874326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26873800_26873928_26874040
m54284U_201203_174622/75826001/ccs	chr12	+	2050	9	NNC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_6	842.827968434247	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992307	80997281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80994902_80995330_80995868_80995943_80996267_80996379_80996493
m54284U_201203_174622/75827674/ccs	chr7	+	3066	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	261	0	intron_retention	FALSE	canonical	3	3307	junction_7	392.492921379906	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758339	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
m54284U_201203_174622/75956897/ccs	chr15	-	3652	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	0	300	intron_retention	FALSE	canonical	3	2899	junction_9	221.962573608807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTGAATTATGGCGTT	NA	False	NA	-8	True	AATAAA	-29	NA	11399687	11383790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
m54284U_201203_174622/76024040/ccs	chr3	-	1785	14	NIC	ENSMUSG00000028107.15	novel	2400	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	10	junction_7	173.545621783543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTGTGCCTTCATCTGA	NA	False	NA	-19	True	AATAAA	-16	NA	95662195	95647287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
m54284U_201203_174622/7604180/ccs	chr4	+	4623	1	Intergenic	novelGene_1897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	66821213	66825836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_66821200_66825800
m54284U_201203_174622/76089192/ccs	chr6	-	4040	15	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	2229	junction_14	318.146802207883	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875683	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
m54284U_201203_174622/76155608/ccs	chr11	-	3944	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_14	135.716334571001	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996863_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120041805
m54284U_201203_174622/76284919/ccs	chr10	-	227	1	Intergenic	novelGene_5639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGCACAATTAATATATG	9571	False	NA	NA	False	AAAAAG	-19	NA	128667164	128666937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128666900_128667200
m54284U_201203_174622/76349797/ccs	chr4	+	5469	16	NIC	ENSMUSG00000028284.14	novel	5773	17	NA	NA	0	1246	intron_retention	TRUE	canonical	3	147	junction_6	20.3262282668368	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAAGATCTATTTTTTC	-24	True	NA	NA	False	AATAAA	-20	NA	31964096	32020806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
m54284U_201203_174622/76350924/ccs	chr2	+	5451	5	NIC	ENSMUSG00000078877.12	novel	1213	4	NA	NA	0	2787	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	16.6038399173203	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	176490404	176505803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487_176499549_176500702
m54284U_201203_174622/76415158/ccs	chr7	-	2787	1	ISM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	9583	1833	5017	1097	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATTTCTTGATTTTTT	NA	False	NA	NA	False	NA	NA	NA	23897991	23895204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_23895200_23898000
m54284U_201203_174622/76415519/ccs	chr9	-	841	2	Antisense	novelGene_ENSMUSG00000106234.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACTTTCAGGAAATGAAGG	NA	False	NA	NA	False	NA	NA	NA	110808690	110798435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_110799208_110808621
m54284U_201203_174622/76481611/ccs	chr6	+	3825	9	NIC	ENSMUSG00000037997.13	novel	3746	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_2	16.3018403869011	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGCCTGTGTGTGCT	NA	False	NA	12	True	ATTAAA	-17	NA	127430582	127471203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_127430786_127444994_127445116_127447667_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
m54284U_201203_174622/76548211/ccs	chr1	-	5031	5	NIC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	0	0	intron_retention	TRUE	canonical	3	404	junction_1	175.811511284102	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGTTGTCTGCTTGTTTT	NA	False	NA	-1	True	AATACA	-19	NA	165462090	165419808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_165421247_165429318_165432312_165433177_165433392_165436006_165436174_165461871
m54284U_201203_174622/76548956/ccs	chr9	+	1142	7	NIC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	978.365544614532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_64188930_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64208323_64208531_64211588
m54284U_201203_174622/7667716/ccs	chr19	-	4907	14	NIC	ENSMUSG00000025220.9	novel	5057	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_13	219.475787506903	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTGTGCTGCTTTTT	5476	False	NA	-12	True	AATAAA	-13	NA	45771990	45738697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45771370
m54284U_201203_174622/76678262/ccs	chr1	-	5586	23	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_21	15.3859439985746	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTCTCATGTTGACT	NA	False	NA	-3	True	ATTAAA	-25	NA	24139297	24050761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
m54284U_201203_174622/76679391/ccs	chr13	-	3386	7	NNC	ENSMUSG00000094870.9	novel	2966	8	NA	NA	0	-77	intron_retention	FALSE	canonical	3	14	junction_3	57.0574758954123	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATATTGCTATTTTCTTT	NA	False	NA	-2	True	AATAAA	-19	NA	120252342	120226800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_120228563_120230241_120230373_120237302_120237526_120237620_120237986_120244307_120244453_120250395_120250498_120251684
m54284U_201203_174622/76743702/ccs	chr2	-	1757	9	NIC	ENSMUSG00000026956.16	novel	3349	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	144.070241115228	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACTCTGATTGTCTGTCT	NA	False	NA	-20	True	NA	NA	NA	25255694	25251505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25251752_25252082_25252150_25252661_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
m54284U_201203_174622/77004907/ccs	chr5	+	197	1	Intergenic	novelGene_2643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACATTCATTGCCTGAGA	NA	False	NA	NA	False	NA	NA	NA	86034790	86034987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_86034800_86035000
m54284U_201203_174622/77006318/ccs	chr10	+	1964	8	NNC	ENSMUSG00000113949.2	novel	1804	7	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_6	283.291801677986	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCTTTATCTGTGGA	NA	False	NA	14	True	AATAAA	-14	NA	80438725	80451618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80449731_80449903_80450437
m54284U_201203_174622/77070624/ccs	chr4	-	3021	14	NIC	ENSMUSG00000028345.16	novel	3102	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_3	206.903316185412	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGAGCTTCCTTCATA	NA	False	NA	-3	True	ATTAAA	-18	NA	48473459	48430857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_48431084_48433107_48433319_48434901_48435084_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
m54284U_201203_174622/77071043/ccs	chr2	+	5431	16	NIC	ENSMUSG00000008200.16	novel	4691	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	188	junction_7	57.9674238018408	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGTCTTGATTAGCAG	NA	False	NA	18	True	AATAAA	-22	NA	90575947	90611365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
m54284U_201203_174622/77072253/ccs	chr17	-	2591	21	NNC	ENSMUSG00000052752.16	novel	3003	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_14	101.901373886715	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGAGACAGCTTCTTG	NA	False	NA	-7	True	AATAAA	-17	NA	24746842	24727823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732297_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
m54284U_201203_174622/77136106/ccs	chr2	-	2173	13	NNC	ENSMUSG00000056486.19	novel	4050	13	NA	NA	0	0	intron_retention	FALSE	canonical	1	6	junction_7	86.8150572577515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATAGCTTTTTTTCTT	NA	False	NA	59	True	ATTAAA	-23	NA	73605690	73442679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73510159_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
m54284U_201203_174622/77136591/ccs	chr10	+	6306	20	NIC	ENSMUSG00000019951.11	novel	6448	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_11	30.3158808478155	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTTTGTCCGATTGGTT	NA	False	NA	21	True	TATAAA	-32	NA	89580852	89655733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
m54284U_201203_174622/77137699/ccs	chr15	+	4424	19	NIC	ENSMUSG00000022201.17	novel	4850	20	NA	NA	0	-234	combination_of_known_splicesites	TRUE	canonical	1	10	junction_6	165.91817111508	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTACTTGTGTTATGTG	40	False	NA	18	True	AATAAA	-18	NA	12117916	12185535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
m54284U_201203_174622/77137954/ccs	chrX	-	6440	10	NIC	ENSMUSG00000031229.17	novel	1920	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	78.1595392786249	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTGAAGCATTTAAT	NA	False	NA	-1	True	AATAAA	-16	NA	104972976	104909151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
m54284U_201203_174622/77203864/ccs	chr5	-	1517	4	NIC	ENSMUSG00000016510.12	novel	4927	4	NA	NA	0	-409	intron_retention	FALSE	canonical	1	3	junction_3	56.7156650905785	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGTAGTGAATCTGAC	NA	False	NA	-18	True	AATAAA	-17	NA	146900595	146891738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_146892626_146893596_146893755_146895634_146896087_146900575
m54284U_201203_174622/77268148/ccs	chr13	-	1662	4	NIC	ENSMUSG00000038982.11	novel	5634	5	NA	NA	0	-3865	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	34.6538437823121	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATAAGTATTTGAGATT	NA	False	NA	-28	True	ATTAAA	-15	NA	38819037	38786681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_38788005_38803065_38803196_38814968_38815052_38818911
m54284U_201203_174622/77269710/ccs	chr5	-	4524	17	NIC	ENSMUSG00000039987.16	novel	4840	18	NA	NA	0	-106	combination_of_known_junctions	FALSE	canonical	3	22	junction_12	67.1548758002723	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTTTTTTTAAG	NA	False	NA	-8	True	AATAAA	-16	NA	21087122	20963766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987446_20994626_20994783_20999292_20999480_21006899_21007065_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
m54284U_201203_174622/77335057/ccs	chr3	+	3059	9	NIC	ENSMUSG00000034544.18	novel	3224	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	114.309270730768	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGACTGCTTCCTCCC	NA	False	NA	16	True	AATAAA	-16	NA	66893017	67265729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67263553
m54284U_201203_174622/77335207/ccs	chr3	+	2637	15	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	203.594046362573	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_157742514_157746144_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201203_174622/7734673/ccs	chr10	-	1540	11	NIC	ENSMUSG00000001211.16	novel	3513	11	NA	NA	92	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_10	110.528910245239	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAAGAGACACTTAGAG	NA	False	NA	-18	True	ATTAAA	-20	NA	78188184	78109444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78188046
m54284U_201203_174622/7735416/ccs	chr9	+	3400	9	NIC	ENSMUSG00000032936.14	novel	3253	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	40	junction_4	5.62222153601225	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTCTGGCCACCCTCT	NA	False	NA	4	True	AATAAA	-12	NA	107813106	107826876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107813251_107822477_107822582_107822687_107822820_107822988_107823417_107823538_107823893_107823981_107824119_107824280_107824360_107824578_107824667_107824942
m54284U_201203_174622/77466054/ccs	chr9	-	6289	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_3	42.9434382518318	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTATACAGAAGTTC	NA	False	NA	6	True	AATAAA	-35	NA	122695050	122677974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773_122691410_122694978
m54284U_201203_174622/77529353/ccs	chr17	-	2516	8	Fusion	ENSMUSG00000083534.2_ENSMUSG00000024459.19	novel	1034	5	NA	NA	274	1844	multi-exon	FALSE	canonical	3	28	junction_5	76.1799695136592	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGGGTATTGATTGTG	NA	False	NA	-1	True	NA	NA	NA	37299663	37278242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr17_-_37279193_37280098_37280210_37280331_37280614_37281212_37281462_37281732_37282006_37298307_37298416_37298546_37298823_37299396
m54284U_201203_174622/77530090/ccs	chr11	+	1839	4	ISM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	54	0	54	0	intron_retention	FALSE	canonical	3	27	junction_1	3.09120616516523	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGTGAATGTGATTG	NA	False	NA	32	True	AATAAA	-24	NA	75358958	75361725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297
m54284U_201203_174622/77531972/ccs	chr6	+	117	1	Intergenic	novelGene_3222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	969	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCTGAACTAGCTGAATG	7782	False	NA	NA	False	NA	NA	NA	39389180	39389297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_39389200_39389300
m54284U_201203_174622/77595264/ccs	chr4	+	1289	8	NNC	ENSMUSG00000033423.17	novel	1336	8	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	247.509142276006	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCTTGTGTCTAAGGC	NA	False	NA	25	True	AATAAA	-32	NA	117407541	117531494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_117407560_117421823_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
m54284U_201203_174622/77595680/ccs	chr15	-	193	1	Intergenic	novelGene_7714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTGGACTCCAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	54685828	54685635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_54685600_54685800
m54284U_201203_174622/77597177/ccs	chr15	+	4239	13	NIC	ENSMUSG00000022307.17	novel	4346	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_2	76.7901179984913	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTTGGATTTTTTCAAT	NA	False	NA	NA	False	AATAAA	-21	NA	41652336	41724444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_41652629_41660869_41660953_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
m54284U_201203_174622/77662444/ccs	chr9	-	880	5	NNC	ENSMUSG00000025894.12	novel	2519	5	NA	NA	0	-1633	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_3	348.214732600446	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTATTTAACAAAACA	-3	True	NA	NA	False	AATAAA	-16	NA	4309471	4296597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308733_4308920_4309253
m54284U_201203_174622/77727167/ccs	chr6	+	1874	12	NNC	ENSMUSG00000068323.13	novel	5123	25	NA	NA	0	276	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_1	111.902850427879	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAAGGCAAGTGGCCA	5726	False	NA	7	True	AATAAA	-17	NA	83254374	83280734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_83254554_83256967_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274366_83276407_83276493_83277452_83277521_83280307
m54284U_201203_174622/77727975/ccs	chr16	-	1321	7	NNC	ENSMUSG00000040681.17	novel	2174	6	NA	NA	0	646	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	2755.22084212661	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAATGCCTGATTAAT	NA	False	NA	-11	True	AATAAA	-19	NA	95928929	95922787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_95923618_95925922_95926046_95928122_95928240_95928352_95928404_95928510_95928541_95928631_95928662_95928789
m54284U_201203_174622/77728071/ccs	chr1	+	3541	6	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1740	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	47.8564520206001	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	136494421	136556051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_136494541_136526570_136526669_136551065_136551108_136552021_136552071_136552598_136552790_136553009
m54284U_201203_174622/77791383/ccs	chr18	+	5404	23	NNC	ENSMUSG00000024620.12	novel	5407	23	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	5	junction_6	4.07370118225601	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCGATTTCTCAGGGTTG	NA	False	NA	NA	False	ATTAAA	-20	NA	61178221	61218133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_+_61178645_61193215_61193262_61194276_61194598_61196938_61197206_61197868_61197997_61198076_61198252_61198786_61198980_61199569_61199686_61201167_61201292_61201816_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
m54284U_201203_174622/77792634/ccs	chr13	+	7735	25	NNC	ENSMUSG00000021488.9	novel	1001	6	NA	NA	0	-1705	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	64.4796344894176	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGGGCTCTCAAGGCT	NA	False	NA	57	True	NA	NA	NA	55359631	55461863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55359657_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459758_55459797_55459931
m54284U_201203_174622/77792744/ccs	chr16	+	5958	30	NIC	ENSMUSG00000041215.17	novel	5997	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	44.8334744143461	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959842	20051323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
m54284U_201203_174622/77924289/ccs	chr8	+	7493	18	NIC	ENSMUSG00000033624.11	novel	4938	18	NA	NA	86	2702	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	9.5822789149634	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATTCACTTGTGAAATG	NA	False	NA	13	True	AATAAA	-22	NA	111821372	111866408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111821459_111828492_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
m54284U_201203_174622/7799583/ccs	chr4	+	3101	12	NIC	ENSMUSG00000028759.14	novel	3113	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	30.9291378840073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTCCAGTACCTGTCCT	4538	False	NA	42	True	AATAAA	-40	NA	137943910	137970481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137944052_137949399_137949500_137950839_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
m54284U_201203_174622/78055531/ccs	chr13	+	4337	19	NIC	ENSMUSG00000038518.16	novel	5997	18	NA	NA	112	186	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	184.132198886199	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTTTGAAGATGGTGAA	8757	False	NA	4	True	AATAAA	-12	NA	44883122	45073770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_44883254_44885188_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
m54284U_201203_174622/78055660/ccs	chr11	-	1279	8	NNC	ENSMUSG00000020766.5	novel	1406	8	NA	NA	0	-67	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_5	295.94483766198	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGGTAGCCACCTGCCTC	NA	False	NA	-37	True	AATAAA	-15	NA	115903545	115899349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901143_115901388_115901509_115901852_115902043_115903339
m54284U_201203_174622/78055959/ccs	chr12	+	2821	8	NIC	ENSMUSG00000040877.17	novel	4356	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	25.1054917156728	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGCCGTGGTCATGGTG	4871	False	NA	NA	False	NA	NA	NA	108860218	108994378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_108860257_108862817_108862986_108863834_108864652_108946616_108946765_108958732_108958864_108990888_108991060_108992335_108992477_108993171
m54284U_201203_174622/78056135/ccs	chr7	+	4795	7	NIC	ENSMUSG00000058454.16	novel	2556	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	394	junction_4	16.5998661306516	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTTGTACTGTCTCCT	NA	False	NA	32	True	NA	NA	NA	143383970	143402147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_143384003_143390374_143390467_143391498_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
m54284U_201203_174622/78118970/ccs	chr7	-	3027	11	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1050	junction_5	59.6945558656734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761734	16738564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
m54284U_201203_174622/78120414/ccs	chr3	-	177	1	Intergenic	novelGene_1637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114602864	114602687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_114602700_114602900
m54284U_201203_174622/78120640/ccs	chr2	-	5652	7	NIC	ENSMUSG00000027650.13	novel	3830	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	176	junction_6	11.066716867356	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGAGATTTATTTCT	NA	False	NA	-8	True	NA	NA	NA	157870353	157823722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_157824381_157834887_157834976_157835273_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
m54284U_201203_174622/78447054/ccs	chrX	+	184	1	Intergenic	novelGene_9694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACGTAGCATTTCTATC	NA	False	NA	NA	False	NA	NA	NA	156382151	156382335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_156382200_156382300
m54284U_201203_174622/78448594/ccs	chr6	+	6108	6	NNC	ENSMUSG00000032712.17	novel	6066	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	36	junction_5	96.737583182546	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAAGTCTTCATGGTTCT	NA	False	NA	12	True	AATAAA	-24	NA	149210953	149237161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_149211403_149211819_149211876_149219132_149219207_149226902_149231283_149232923_149233005_149236093
m54284U_201203_174622/78512998/ccs	chr2	-	1409	9	NNC	ENSMUSG00000074656.13	novel	2542	9	NA	NA	0	-1019	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	4404.11262344641	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGAAGTCGATCTG	3736	False	NA	-25	True	ATTAAA	-15	NA	154734751	154714356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_154714819_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
m54284U_201203_174622/78513459/ccs	chr16	+	5353	33	NIC	ENSMUSG00000045983.17	novel	5440	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	299	junction_5	317.012396248159	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491569	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494509_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/78514718/ccs	chr2	+	5941	39	NNC	ENSMUSG00000074582.11	novel	8770	39	NA	NA	-53	-2879	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_7	35.083764031457	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCTAAGTGCGCGGTG	NA	False	NA	8	True	AATAAA	-20	NA	166647454	166737093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687372_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
m54284U_201203_174622/78577702/ccs	chr19	+	5537	14	NNC	ENSMUSG00000032702.17	novel	5637	14	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	3	46	junction_1	13.2338994508254	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGCCCCTGCTTCA	NA	False	NA	6	True	AATAAA	-15	NA	25214113	25411860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_25214357_25252111_25252199_25295668_25295797_25355774_25355895_25386449_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884
m54284U_201203_174622/78644676/ccs	chrX	+	2279	1	FSM	ENSMUSG00000119320.1	ENSMUST00000082806.3	137	1	-1627	-515	-1627	515	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTTCTGATTCTT	NA	False	NA	12	True	AATAAA	-22	NA	73314462	73316741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_73314500_73316700
m54284U_201203_174622/78644707/ccs	chr12	-	5416	20	NNC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_19	29.7654729426795	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTAAATGAGTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	85017674	84964923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988534_84988732_84990105_84990167_84997826_84998156_85017402
m54284U_201203_174622/7864815/ccs	chr6	+	1371	6	NIC	ENSMUSG00000030271.15	novel	1549	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_4	90.4464482442511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGTGAAGAGTGAGAGGG	2335	False	NA	14	True	AATAAA	-23	NA	113303959	113311149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310591_113310642_113310802
m54284U_201203_174622/7866380/ccs	chr17	-	4349	7	NIC	ENSMUSG00000023951.19	novel	1973	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	122	junction_2	180.347273028701	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343295	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46329806_46331916_46332049_46333202_46333275_46334990_46335021_46335369_46336470_46339276_46339326_46342216
m54284U_201203_174622/7866444/ccs	chr14	-	4162	16	NIC	ENSMUSG00000021803.11	novel	4332	17	NA	NA	74	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_15	5.55937646383717	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTGACCTCCCGGTCCT	NA	False	NA	NA	False	AATAAA	-18	NA	36820230	36799813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36820045
m54284U_201203_174622/788054/ccs	chr16	-	6096	24	NNC	ENSMUSG00000014039.19	novel	6194	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_15	8.90996765591714	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGGCCCTCTGCTCTCC	6483	False	NA	0	True	AATAAA	-25	NA	97653050	97592719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_97595857_97596849_97597060_97598896_97598978_97600253_97600430_97600753_97600838_97604909_97605042_97607244_97607365_97607674_97607755_97608208_97608373_97608921_97609057_97609854_97609987_97612256_97612352_97613757_97613926_97617305_97617394_97617735_97617831_97618150_97618246_97619411_97619542_97622967_97623211_97630810_97630913_97636777_97637031_97638773_97638928_97640454_97640549_97641122_97641169_97652968
m54284U_201203_174622/78839963/ccs	chr16	+	4921	46	NIC	ENSMUSG00000033653.19	novel	4935	47	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_44	28.0979240039782	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGTCTCTTGGTTGTCA	NA	False	NA	21	True	AATAAA	-27	NA	21241918	21463430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21459428_21459510_21462870
m54284U_201203_174622/78842666/ccs	chr4	-	3158	1	NIC	ENSMUSG00000028479.19	novel	5384	12	NA	NA	2337	2021	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAAGCTTATTTTGTG	6216	False	NA	NA	False	AATAAA	-16	NA	44060836	44057678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_44057700_44060800
m54284U_201203_174622/78972076/ccs	chr11	+	1209	9	NNC	ENSMUSG00000020407.14	novel	518	6	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	921.243512528039	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068861	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_9068970_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
m54284U_201203_174622/79038484/ccs	chr1	+	5683	30	NNC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_27	65.4014948539556	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4070	False	NA	20	True	AATAAA	-24	NA	87781008	87872212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867910_87868029_87869090_87869222_87870104
m54284U_201203_174622/79038919/ccs	chr11	+	5006	23	NIC	ENSMUSG00000040463.17	novel	4358	26	NA	NA	0	-207	intron_retention	FALSE	canonical	3	2360	junction_7	200.813510789744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGACTCAACCTTCCAG	NA	False	NA	57	True	AATAAA	-27	NA	72332180	72342387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72336113_72336433_72336560_72336719_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
m54284U_201203_174622/79103781/ccs	chr16	-	2151	11	NIC	ENSMUSG00000022537.19	novel	4331	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.46260011349907	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCGTCTCACGGTGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	30369388	30332787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_30333641_30337117_30337151_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
m54284U_201203_174622/79169485/ccs	chr13	+	2490	22	NIC	ENSMUSG00000021555.16	novel	3793	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	174.275253394101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1309	False	NA	21	True	AATGAA	-19	NA	59733207	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_59733274_59733966_59734096_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201203_174622/79233370/ccs	chr15	-	2765	3	NNC	ENSMUSG00000035891.17	novel	4518	13	NA	NA	8763	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCCCTCATCCTC	6306	False	NA	-14	True	AATAAA	-17	NA	86027886	86023329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_86025814_86026882_86027092_86027814
m54284U_201203_174622/79234581/ccs	chr5	+	2150	7	NIC	ENSMUSG00000004455.17	novel	2492	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	215	junction_5	1006.08571812854	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTCGTGTCTTTCTGTC	NA	False	NA	-1	True	ATTAAA	-15	NA	122296418	122313332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122310867_122311208_122311344_122312117
m54284U_201203_174622/79235512/ccs	chr17	+	1852	3	NNC	ENSMUSG00000023067.15	novel	1913	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	546	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTCTTGTCATTAGA	4659	False	NA	24	True	NA	NA	NA	29312754	29319696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29312836_29317419_29317812_29318317
m54284U_201203_174622/79300563/ccs	chr16	-	3923	15	NIC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	744	junction_6	124.433922305809	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
m54284U_201203_174622/79301125/ccs	chr7	+	3055	28	NNC	ENSMUSG00000056394.21	novel	3091	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	352.146110871497	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGTGAGGAGGTCTACA	2629	False	NA	30	True	AATAAA	-18	NA	13012760	13045350	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025212_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
m54284U_201203_174622/7930629/ccs	chr13	+	855	5	NIC	ENSMUSG00000021361.8	novel	914	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	251.069089097005	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTCGTCTTTGTTAG	NA	False	NA	15	True	AATAAA	-22	NA	41169767	41176062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_41169875_41171181_41171259_41171831_41171934_41174594_41174683_41175581
m54284U_201203_174622/79364111/ccs	chr10	+	5202	6	NIC	ENSMUSG00000019817.19	novel	3946	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_3	31.1704988731332	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTGTCTTTTCATTTA	3054	False	NA	18	True	AATAAA	-18	NA	12966575	13007438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_12966769_12981598_12981638_12988262_12988295_12992453_12992526_13000599_13000913_13002885
m54284U_201203_174622/79429938/ccs	chr6	-	3455	16	NIC	ENSMUSG00000053470.14	novel	4753	26	NA	NA	55	0	intron_retention	FALSE	canonical	3	172	junction_15	78.0330414347381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCTGTTCTTTGTCCTTT	NA	False	NA	-17	True	ATTAAA	-19	NA	71586068	71566020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71585988
m54284U_201203_174622/79432046/ccs	chr18	+	2816	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_10	266.201994226384	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGGACAGAAAATTGATA	6249	False	NA	53	True	TATAAA	-2	NA	34758059	34765888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
m54284U_201203_174622/79495329/ccs	chr2	+	2561	14	NNC	ENSMUSG00000017861.12	novel	789	7	NA	NA	-169	983	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	819.254105843131	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162901099	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162901178_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201203_174622/79496388/ccs	chr11	-	2857	1	FSM	ENSMUSG00002076664.1	ENSMUST00020182918.1	84	1	-1728	-1045	-1728	1045	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239373	120236516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_120236500_120239400
m54284U_201203_174622/79497342/ccs	chr3	+	1645	15	NIC	ENSMUSG00000028109.15	novel	1444	16	NA	NA	0	190	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	83.0812240877466	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTGTGTTATTAACAAC	NA	False	NA	9	True	ATTAAA	-20	NA	95466988	95495172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95467035_95468538_95468592_95469790_95469936_95473931_95473996_95474994_95475032_95477976_95477998_95478238_95478266_95482845_95482914_95483587_95483740_95485363_95485612_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
m54284U_201203_174622/79563078/ccs	chr4	+	5543	8	NIC	ENSMUSG00000028920.10	novel	5934	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	69.7113582523519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTTTTATTAGTATA	NA	False	NA	15	True	AATAAA	-19	NA	140875232	140931373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_140875491_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
m54284U_201203_174622/79563166/ccs	chr14	-	3321	17	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	43.636236017214	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTGTCTTGGTTTC	NA	False	NA	-3	True	AGTAAA	-19	NA	123220695	123156389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123209151_123209369_123210581_123210698_123215485_123215699_123220583
m54284U_201203_174622/79692683/ccs	chr4	-	2971	16	NIC	ENSMUSG00000029032.13	novel	2860	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_15	8.43958924750883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAACAGGTAGGTGGAGAC	NA	False	NA	34	True	AATATA	-4	NA	154384511	154362942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_154363553_154364154_154364257_154364692_154364767_154365287_154365477_154365774_154365927_154366280_154366374_154366462_154366538_154366972_154367103_154367216_154367370_154369441_154369603_154370070_154370128_154371375_154371546_154372424_154372471_154375392_154376011_154377288_154377400_154384281
m54284U_201203_174622/79692975/ccs	chr7	-	5502	29	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	195	junction_23	121.224508155534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27033073	27004564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
m54284U_201203_174622/79760144/ccs	chr15	-	189	1	Intergenic	novelGene_7775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTGACAACTGCCGGC	4934	False	NA	NA	False	NA	NA	NA	76268964	76268775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76268800_76269000
m54284U_201203_174622/79890433/ccs	chr1	+	1100	8	NIC	ENSMUSG00000026254.18	novel	1119	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	832.747211563838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTCATGCTCTTGCTC	NA	False	NA	15	True	AATAAA	-15	NA	87141700	87155786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87141742_87142067_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
m54284U_201203_174622/79890696/ccs	chr15	-	188	1	Intergenic	novelGene_7670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAACATTGGACCTTG	NA	False	NA	NA	False	NA	NA	NA	34183335	34183147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_34183100_34183300
m54284U_201203_174622/79955213/ccs	chr9	-	2725	5	NIC	ENSMUSG00000025894.12	novel	2843	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	350.365077454931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGGGCTTGACATGT	-3	True	NA	NA	False	AATAAA	-45	NA	4309471	4294792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_4296840_4299297_4299370_4302469_4302632_4308693_4308920_4309253
m54284U_201203_174622/80020481/ccs	chr14	-	5843	14	NNC	ENSMUSG00000021796.16	novel	5956	13	NA	NA	3	-330	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	41.8421943828145	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATGTGTTTTGTGAT	NA	False	NA	-3	True	AGTAAA	-21	NA	34224641	34133020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34223318_34223539_34224351
m54284U_201203_174622/80020909/ccs	chr14	+	4365	41	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	166.916953527795	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201203_174622/80086655/ccs	chr9	+	5479	7	NIC	ENSMUSG00000057551.11	novel	3988	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	124	junction_2	35.7848509226398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGGACTGATATTTGTT	NA	False	NA	14	True	AATAAA	-17	NA	19533397	19561027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_19533582_19540392_19540503_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19556604_19557997
m54284U_201203_174622/80087306/ccs	chrX	+	5136	6	NIC	ENSMUSG00000073125.11	novel	3780	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	979	junction_3	287.13132883752	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235816	72246536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72243451_72245455_72245552_72245645
m54284U_201203_174622/80151991/ccs	chr7	+	3097	16	NIC	ENSMUSG00000005566.15	novel	3245	17	NA	NA	227	0	intron_retention	FALSE	canonical	3	3307	junction_7	367.76238705628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATGCCTCAGCTGTCTG	NA	False	NA	58	True	AATAAA	-19	NA	12758305	12764962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764520_12764615
m54284U_201203_174622/80217551/ccs	chr5	-	6598	5	NNC	ENSMUSG00000048578.12	novel	5955	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	484.643876985978	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTGTTGAGAGTGAATT	4724	False	NA	-3	True	AATAAA	-16	NA	115296238	115281039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295218
m54284U_201203_174622/80217953/ccs	chr7	-	5190	29	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	195	junction_23	121.491722024211	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27033073	27004564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
m54284U_201203_174622/80218045/ccs	chr13	+	3124	21	NIC	ENSMUSG00000021666.17	novel	3157	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	43.0145033680502	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTAACAAATCTTAATT	NA	False	NA	NA	False	AATAAA	-25	NA	97274485	97312959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
m54284U_201203_174622/80282615/ccs	chr10	-	4521	8	NIC	ENSMUSG00000015755.17	novel	4380	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	19.8185647866863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGATTTTGTGGCTTGTC	1288	False	NA	-6	True	ATTAAA	-17	NA	7831994	7781416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796379_7800448_7800637_7808831_7808973_7831564
m54284U_201203_174622/80283496/ccs	chr13	+	2786	6	NIC	ENSMUSG00000006720.17	novel	3198	6	NA	NA	124	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	28.5769137591868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTTTAAGTTTCTTCTG	NA	False	NA	12	True	ATTAAA	-16	NA	22129430	22144655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134372_22134500_22142593
m54284U_201203_174622/80284045/ccs	chr13	+	5327	25	NIC	ENSMUSG00000109561.2	novel	5859	25	NA	NA	0	-244	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	3.76017139089283	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGCTTTTATTGTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	96884779	97046303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_96884876_96884972_96885144_96888491_96888566_96889478_96889589_96910844_96910886_96916816_96916894_96928208_96928253_96935118_96935400_96935895_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466_97029608_97040538_97040639_97045991
m54284U_201203_174622/80414168/ccs	chr6	+	4489	14	NIC	ENSMUSG00000001632.17	novel	4773	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	39.0967545074748	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	287	False	NA	28	True	AATAAA	-16	NA	113284152	113301821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294638_113295372_113295683_113296001_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
m54284U_201203_174622/80414288/ccs	chr1	-	1893	14	NIC	ENSMUSG00000057363.13	novel	4620	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	53.1063463596267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATTGACATCTGCTT	NA	False	NA	-2	True	AATAAA	-34	NA	43866960	43788671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
m54284U_201203_174622/80415567/ccs	chr3	-	5098	26	NNC	ENSMUSG00000027770.6	novel	5620	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	105.355292225877	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCATGTTTTAAC	NA	False	NA	0	True	NA	NA	NA	62414425	62375433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_62375729_62376250_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384703_62384791_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401764_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
m54284U_201203_174622/80544031/ccs	chrX	+	4565	17	NNC	ENSMUSG00000000787.13	novel	4692	17	NA	NA	0	-72	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_15	119.100125288557	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTCTCCTTTGTTGTT	NA	False	NA	9	True	AATAAA	-11	NA	13147260	13160219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157404_13157542_13157651
m54284U_201203_174622/80544963/ccs	chr7	+	5791	13	NIC	ENSMUSG00000059273.10	novel	5853	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	31.572997429238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGTCTAGTCTCATC	4778	False	NA	18	True	ATTAAA	-22	NA	16135131	16171621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_16135232_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
m54284U_201203_174622/8060938/ccs	chr19	-	3074	17	NIC	ENSMUSG00000024833.16	novel	2421	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	334	junction_16	38.1800320029986	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAATCTTTTTTTTTTCC	1626	False	NA	0	True	AATAAA	-21	NA	6014230	5990569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
m54284U_201203_174622/80610851/ccs	chr19	-	4260	20	NIC	ENSMUSG00000024969.16	novel	2660	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	120.360883937729	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	3860	False	NA	-1	True	AATAAA	-20	NA	7319225	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7254816_7255406_7255452_7256475_7256644_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7319131
m54284U_201203_174622/80611507/ccs	chr15	+	1980	15	NIC	ENSMUSG00000015002.19	novel	5215	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_14	139.24783367677	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	65658888	65725955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65725741
m54284U_201203_174622/8061532/ccs	chr1	+	178	1	Intergenic	novelGene_354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTGGGTCTTAATG	NA	False	NA	NA	False	NA	NA	NA	136655114	136655292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_136655100_136655300
m54284U_201203_174622/80675834/ccs	chr2	+	1541	5	NIC	ENSMUSG00000032966.15	novel	894	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_4	1013.2641252408	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	False	NA	23	True	AATAAA	-24	NA	151384513	151403610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401537_151402540
m54284U_201203_174622/80676196/ccs	chr15	-	3685	15	NIC	ENSMUSG00000022391.17	novel	3033	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	698	junction_14	53.3582424824537	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCGGAAGCTTCTTTC	NA	False	NA	-9	True	AATAAA	-20	NA	81614102	81588453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
m54284U_201203_174622/80677536/ccs	chr1	+	4608	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_14	61.9559515345827	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201203_174622/80741219/ccs	chr1	+	2390	8	NIC	ENSMUSG00000025903.15	novel	2507	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	278.899074716197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTATATAGTACTGTT	NA	False	NA	21	True	AATAAA	-22	NA	4878114	4916962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_4878206_4878677_4878710_4898806_4898873_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
m54284U_201203_174622/80741938/ccs	chr17	+	2455	10	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	162	junction_1	172.384010028715	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGTTGGGGTATCT	NA	False	NA	10	True	AATAAA	-19	NA	26471924	26500942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26472066_26472947_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
m54284U_201203_174622/80743132/ccs	chr7	-	2354	11	NIC	ENSMUSG00000003099.12	novel	2072	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1078	junction_5	54.9235832771315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCTCGACGTGTGTCCA	NA	False	NA	-3	True	AATAAA	-37	NA	16761734	16738564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16741172_16741650_16741757_16742538_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
m54284U_201203_174622/80743174/ccs	chr5	-	179	1	Intergenic	novelGene_2798	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAACAAAAAAAGAAAG	5418	False	NA	NA	False	NA	NA	NA	115267475	115267296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115267300_115267500
m54284U_201203_174622/80806911/ccs	chr14	+	4981	28	NIC	ENSMUSG00000033060.17	novel	6092	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	5.95755448303927	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTCTAATTATTTAA	NA	False	NA	39	True	AATAAA	-39	NA	101967392	102172146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
m54284U_201203_174622/80807499/ccs	chr2	+	5925	10	NIC	ENSMUSG00000038533.16	novel	6069	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	140.841474671541	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGACCAGACCTGGGGAA	5317	False	NA	37	True	AATAAA	-27	NA	154278414	154381276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_154278557_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
m54284U_201203_174622/80872791/ccs	chr16	+	4161	18	NIC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	0	0	combination_of_known_junctions	TRUE	non_canonical	1	16	junction_3	200.230766521011	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAACTGAAAGTTAT	1088	False	NA	16	True	AATAAA	-27	NA	93629122	93672961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_93629237_93638258_93638332_93641081_93641215_93641840_93641937_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
m54284U_201203_174622/80939167/ccs	chr11	-	3715	17	NIC	ENSMUSG00000020330.17	novel	3892	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	165.236383705284	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCCAATCAGTGATTAA	NA	False	NA	-8	True	AATAAA	-17	NA	40624249	40592221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_40593686_40594608_40594763_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
m54284U_201203_174622/81002744/ccs	chr6	+	2645	14	NIC	ENSMUSG00000052337.16	novel	2299	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	452.789447783038	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTCTATCCCTTTTCAA	NA	False	NA	12	True	AATAAA	-19	NA	71808362	71852241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
m54284U_201203_174622/81003428/ccs	chr6	+	1803	12	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	60	162	combination_of_known_splicesites	FALSE	canonical	2	39	junction_5	239.001642513115	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGACTGCTTTCTTTCA	NA	False	NA	42	True	GATAAA	-36	NA	124640049	124681142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
m54284U_201203_174622/81003604/ccs	chr1	+	2497	14	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_5	8.58855713199065	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57814019	57986124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
m54284U_201203_174622/81005012/ccs	chr7	+	5154	6	NNC	ENSMUSG00000108621.2	novel	208	2	NA	NA	304	4552	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	20.5075595817737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACCTGGAGGTTCTGTT	NA	False	NA	16	True	AATAAA	-19	NA	39202252	39219186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_39202324_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
m54284U_201203_174622/81135155/ccs	chr1	-	5037	15	ISM	ENSMUSG00000022995.17	ENSMUST00000111024.10	3572	16	10	-1442	0	1442	intron_retention	FALSE	canonical	3	22	junction_3	127.62077113264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTTGTTTGTGACACT	5643	False	NA	-22	True	AATAAA	-16	NA	181847545	181730522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_181733463_181733951_181734010_181735862_181735942_181739161_181739225_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
m54284U_201203_174622/81136215/ccs	chr1	-	5029	24	NIC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_14	57.1871203128697	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	False	NA	-10	True	AATAAA	-12	NA	38168743	38091876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38114105_38118370_38118477_38120239_38120440_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
m54284U_201203_174622/81199838/ccs	chr16	+	1172	6	NNC	ENSMUSG00000022871.14	novel	1572	8	NA	NA	9947	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	187.111731326499	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGGAAATGAGACTAA	NA	False	NA	35	True	AATAAA	-41	NA	22750441	22758528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_22750649_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
m54284U_201203_174622/81265113/ccs	chr9	+	3414	11	Fusion	ENSMUSG00000103970.2_ENSMUSG00000006673.15	novel	721	3	NA	NA	80	0	multi-exon	FALSE	canonical	3	61	junction_1	223.453440340488	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1763	False	NA	64	True	NA	NA	NA	108394901	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_+_108395176_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201203_174622/81265118/ccs	chr6	-	154	1	Intergenic	novelGene_3188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTCTTGCTTATAAATAC	NA	False	NA	NA	False	AATAAA	-12	NA	38085236	38085082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38085100_38085200
m54284U_201203_174622/81266795/ccs	chr14	-	2003	16	NIC	ENSMUSG00000040472.16	novel	1886	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	119	junction_15	118.227389193687	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGCCCTGACAACACTT	NA	False	NA	1	True	AATAAA	-39	NA	55959720	55953761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
m54284U_201203_174622/81266896/ccs	chr14	+	799	1	Antisense	novelGene_ENSMUSG00000037526.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACCAAAAAAAACAAACCA	NA	False	NA	NA	False	NA	NA	NA	47783240	47784039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_47783200_47784000
m54284U_201203_174622/8127598/ccs	chr7	+	2568	11	NIC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	161	junction_4	16.1186227699515	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTTGCCTTGTGCCTGC	NA	False	NA	12	True	AATAAA	-15	NA	126028237	126045073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126044109_126044468
m54284U_201203_174622/8128047/ccs	chr12	-	1685	14	NNC	ENSMUSG00000021022.10	novel	4216	14	NA	NA	0	-2513	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	69.7240545793362	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATCTTGCTTACTAG	NA	False	NA	NA	False	AATAAA	-26	NA	55349783	55328288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349717
m54284U_201203_174622/8128404/ccs	chr13	-	1983	16	NNC	ENSMUSG00000021546.19	novel	2754	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_15	1996.58071712616	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	4751	False	NA	-5	True	AATAAA	-14	NA	58550330	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550202
m54284U_201203_174622/81332389/ccs	chr10	+	180	1	Intergenic	novelGene_5603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTATATGAGTATACTG	NA	False	NA	NA	False	NA	NA	NA	127209011	127209191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_127209000_127209200
m54284U_201203_174622/81397648/ccs	chr13	-	2221	13	NIC	ENSMUSG00000021569.11	novel	3399	13	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	137.026431959515	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTATTTTTATTCTAA	NA	False	NA	-20	True	ATTAAA	-14	NA	74085822	74060576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068568_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
m54284U_201203_174622/81398025/ccs	chr10	-	3353	13	NNC	ENSMUSG00000020190.14	novel	3439	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	137.870913861078	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGCAGTGACAGCAG	9981	False	NA	-46	True	AATAAA	-14	NA	80512127	80501160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_80503167_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511956
m54284U_201203_174622/81461409/ccs	chr12	+	1980	11	NIC	ENSMUSG00000047022.19	novel	2117	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_10	19.5642531163344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATAAAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	57277212	57513827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57513241
m54284U_201203_174622/81527195/ccs	chr15	-	5487	27	NIC	ENSMUSG00000022360.9	novel	5684	28	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	73.713462516782	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCGTTTCTAGTTCTTGT	NA	False	NA	-11	True	AATAAA	-20	NA	57998478	57957441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
m54284U_201203_174622/81528403/ccs	chr14	+	3465	16	NIC	ENSMUSG00000021901.11	novel	3460	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_11	97.1540815177394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGGTCGGTAGGCTGG	NA	False	NA	25	True	AATAAA	-32	NA	30973459	30981901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979582_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
m54284U_201203_174622/81529040/ccs	chr9	-	6710	9	ISM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	333	4516	0	2065	3prime_fragment	FALSE	canonical	3	62	junction_5	6.557438524302	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTTGCTGTGTAG	NA	False	NA	-1	True	AATAAA	-21	NA	20371123	20344260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842
m54284U_201203_174622/81529608/ccs	chr11	+	3156	18	NIC	ENSMUSG00000020280.13	novel	3559	18	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	26.8721180155863	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCATTGTTTTTTTTT	NA	False	NA	10	True	ATTAAA	-17	NA	23616399	23682876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_23616454_23617287_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
m54284U_201203_174622/81592931/ccs	chr9	-	5933	32	NIC	ENSMUSG00000043987.19	novel	6105	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_21	18.7691490839651	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTCCTGTGAGTGTGCT	NA	False	NA	37	True	ATTAAA	-25	NA	45739937	45678243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45693249_45693547_45696180_45696328_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
m54284U_201203_174622/81593175/ccs	chr1	-	4661	25	NIC	ENSMUSG00000026442.15	novel	9739	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	7.54143646057493	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATCTGTCCTTTCATTA	NA	False	NA	-1	True	NA	NA	NA	132669516	132496986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216_132593326_132669408
m54284U_201203_174622/81660702/ccs	chr8	+	872	4	NNC	ENSMUSG00000054717.8	novel	2628	5	NA	NA	344	1286	at_least_one_novel_splicesite	FALSE	canonical	3	397	junction_1	2947.39896632042	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTGTATTAATTTTT	NA	False	NA	10	True	AATAAA	-21	NA	57965925	57967529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_57965947_57966095_57966242_57966323_57966499_57966999
m54284U_201203_174622/81724057/ccs	chr16	+	5447	33	NNC	ENSMUSG00000045983.17	novel	5444	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_5	348.866641560568	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTCTTTACTGAC	NA	False	NA	17	True	ATTAAA	-17	NA	20491472	20511634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494512_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
m54284U_201203_174622/81790128/ccs	chr10	+	634	4	NNC	ENSMUSG00000063457.15	novel	500	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	409	junction_1	3639.28063709788	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTTTTTGTTTTTTT	6342	False	NA	30	True	AATAAA	-21	NA	80128286	80129948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80128452_80128608_80128695_80129475_80129711_80129800
m54284U_201203_174622/81790609/ccs	chr17	-	3887	15	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	184.187792367309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540159	32522647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32532078_32532237_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
m54284U_201203_174622/8192129/ccs	chr2	-	2537	15	NIC	ENSMUSG00000027634.15	novel	2612	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_13	42.7715812574811	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGCTGCTGGTGTTATTT	5927	False	NA	0	True	AATAAA	-22	NA	156833963	156769264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811956_156812059_156833918
m54284U_201203_174622/81922451/ccs	chr16	-	201	1	Intergenic	novelGene_8098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGTAGAACTGAGACA	NA	False	NA	NA	False	NA	NA	NA	17049833	17049632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_17049600_17049800
m54284U_201203_174622/81986582/ccs	chr13	+	2987	16	NNC	ENSMUSG00000074886.12	novel	2994	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_15	160.448067056672	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTCCTTTTATTTC	-7	True	NA	28	True	AATACA	-30	NA	55593150	55608740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599650_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
m54284U_201203_174622/82052989/ccs	chr11	-	2752	11	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	181.876469066232	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456411
m54284U_201203_174622/82053083/ccs	chr9	+	4782	33	NIC	ENSMUSG00000037286.16	novel	4800	35	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_4	76.1785461822257	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCTCAAGTTATCAGTC	NA	False	NA	7	True	AATAAA	-22	NA	100525668	100839459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
m54284U_201203_174622/82184480/ccs	chr12	+	2366	11	ISM	ENSMUSG00000097451.12	ENSMUST00000238333.2	2746	13	1254	0	0	0	3prime_fragment	FALSE	canonical	3	66	junction_8	178.955888419465	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGAAGTACAATTATTGA	2865	False	NA	NA	False	ACTAAA	-5	NA	109612563	109628150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_109613186_109615587_109615677_109616505_109616592_109617446_109617534_109618292_109618373_109620719_109620867_109622282_109622369_109623221_109623266_109624486_109624556_109626156_109626242_109627179
m54284U_201203_174622/82315917/ccs	chr18	-	2294	9	NIC	ENSMUSG00000038425.19	novel	2778	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	116	junction_8	75.0961883187156	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACACTAGGCTCTCACTG	NA	False	NA	-21	True	AATAAA	-14	NA	70663339	70641759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70663258
m54284U_201203_174622/82379452/ccs	chr2	+	1451	9	NNC	ENSMUSG00000027456.9	novel	1399	9	NA	NA	3366	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	8.04285397107271	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCGGTCATGAAAGTTCC	NA	False	NA	19	True	AATAAA	-19	NA	151417907	151431925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_151418043_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
m54284U_201203_174622/82381626/ccs	chr13	-	3325	5	NIC	ENSMUSG00000021302.11	novel	870	5	NA	NA	0	198	intron_retention	FALSE	canonical	3	19	junction_4	113.102829319164	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTTTTTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	14238003	14226231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_14229041_14229734_14229806_14232380_14232474_14233903_14234043_14237790
m54284U_201203_174622/82444899/ccs	chr10	-	2085	8	NNC	ENSMUSG00000052681.9	novel	2724	8	NA	NA	53	-597	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_7	328.295349852376	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATAGGTGTTATTTTAC	8658	False	NA	-18	True	AATAAA	-21	NA	117681887	117650372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681724
m54284U_201203_174622/82445153/ccs	chr19	-	2373	14	NIC	ENSMUSG00000024777.11	novel	2742	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	30.6883552496545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTTGCTTTATTGAG	NA	False	NA	0	True	AATAAA	-14	NA	6285902	6277794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6284761_6285541
m54284U_201203_174622/82445227/ccs	chr8	+	4927	25	NIC	ENSMUSG00000031691.15	novel	4884	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	64	junction_1	92.5778951298131	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGTGTCTCATTTCCT	NA	False	NA	17	True	AGTAAA	-19	NA	85763796	85784212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85763921_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
m54284U_201203_174622/82446634/ccs	chr1	-	4555	8	NIC	ENSMUSG00000026675.13	novel	4612	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	22.7093435773535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAGACTCAGTTAATTT	NA	False	NA	-1	True	AATAAA	-18	NA	169796810	169777103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_169780704_169783503_169783603_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
m54284U_201203_174622/82447113/ccs	chr17	+	192	1	Intergenic	novelGene_8719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTGACTCGTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	74515496	74515688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_74515500_74515700
m54284U_201203_174622/82576839/ccs	chr5	+	2053	10	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	1279.09584192878	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77099190_77099615_77099683_77104395_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201203_174622/8259945/ccs	chr14	+	1850	9	NNC	ENSMUSG00000022131.4	novel	1875	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	53.8678939629164	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTAGCATTTGTTTATT	NA	False	NA	5	True	AATAAA	-24	NA	118374569	118400673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_118374753_118377173_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
m54284U_201203_174622/82641233/ccs	chr13	-	3711	10	NIC	ENSMUSG00000032999.11	novel	3551	11	NA	NA	0	-3412	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	18.6554198923001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTGTATGTTGCATGA	NA	False	NA	NA	False	NA	NA	NA	65353791	65328768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_65329517_65330716_65330888_65332776_65332948_65335254_65335423_65338038_65338201_65338632_65338792_65341799_65343370_65346982_65347285_65353433_65353531_65353628
m54284U_201203_174622/82642939/ccs	chrX	+	1756	2	NIC	ENSMUSG00000008035.13	novel	447	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGGACAAGTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	10581257	10585929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_10581307_10584222
m54284U_201203_174622/82706672/ccs	chr13	+	2749	23	NNC	ENSMUSG00000021555.16	novel	1207	14	NA	NA	269	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	171.224177639329	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAAAGGTTAATAAATT	1604	False	NA	21	True	AATGAA	-19	NA	59733502	59782566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_59733794_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
m54284U_201203_174622/82773535/ccs	chr2	+	3370	25	NIC	ENSMUSG00000042359.19	novel	8037	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_11	10.767427733679	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTATAGCTACGCGT	NA	False	NA	6	True	AATAAA	-17	NA	76236851	76426389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
m54284U_201203_174622/82904629/ccs	chr17	-	4277	6	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	338	junction_2	76.7984374841051	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCCCTGGTCTCTCCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	46343295	46327918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46336470_46339276_46339326_46342216
m54284U_201203_174622/82905105/ccs	chr5	+	5795	19	NIC	ENSMUSG00000029647.16	novel	5048	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_6	40.1597120151004	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTGTTTTTATTACC	NA	False	NA	NA	False	AATAAA	-23	NA	147366970	147485312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147439894_147440013_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
m54284U_201203_174622/82968817/ccs	chr9	-	3050	19	NNC	ENSMUSG00000031995.10	novel	3259	19	NA	NA	-14051	0	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_18	142.806190428466	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTGCTATACT	1412	False	NA	0	True	AGTAAA	-24	NA	31028885	31000697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_31001324_31001697_31001835_31002632_31002908_31006830_31007018_31007770_31007894_31008149_31008264_31008368_31008480_31008852_31008958_31011435_31011567_31011681_31011792_31014171_31014270_31014981_31015122_31017309_31017551_31017784_31017821_31018012_31018171_31019199_31019271_31019450_31019579_31019866_31020027_31028786
m54284U_201203_174622/82971134/ccs	chr10	-	3200	12	NIC	ENSMUSG00000020235.17	novel	3057	14	NA	NA	0	225	intron_retention	FALSE	canonical	3	644	junction_7	54.5531812709109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGGTCTCCTGTGTTTTG	NA	False	NA	NA	False	NA	NA	NA	81214297	81202706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81205093_81205171_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
m54284U_201203_174622/83166232/ccs	chr14	+	4337	40	NNC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	107	junction_3	161.030168971125	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904752_47904891_47907587_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201203_174622/83166663/ccs	chr1	+	177	1	Intergenic	novelGene_338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGTCCACTTTTATACA	NA	False	NA	NA	False	NA	NA	NA	135270848	135271025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_135270800_135271000
m54284U_201203_174622/83166709/ccs	chr6	+	2014	11	ISM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	8750	0	-1975	0	3prime_fragment	FALSE	canonical	3	54	junction_8	8.87693640846886	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTCTTTCACTTGTCTT	1098	False	NA	18	True	ATTAAA	-18	NA	83122840	83129560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
m54284U_201203_174622/8323535/ccs	chr2	+	7920	24	NIC	ENSMUSG00000061186.16	novel	7874	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	14.3404460598235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGTGTTTCGT	4701	False	NA	3	True	AATAAA	-16	NA	10377258	10600064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_10377428_10384995_10385047_10385833_10385878_10398075_10398218_10406799_10406895_10409248_10409490_10442757_10442847_10444677_10444925_10450495_10450594_10461715_10461818_10466135_10466284_10528755_10528839_10535301_10535426_10547743_10547858_10552241_10552285_10561029_10561104_10562378_10562522_10573171_10573282_10580146_10580323_10582339_10582439_10582625_10582943_10583945_10584204_10585354_10585484_10595240
m54284U_201203_174622/8323819/ccs	chr15	+	5382	11	NIC	ENSMUSG00000022295.9	novel	2071	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1269	junction_10	99.1132685365587	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTGCTAGTCATTTAT	195	False	NA	28	True	AATAAA	-14	NA	38662187	38692687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38690904_38691855
m54284U_201203_174622/8323904/ccs	chr1	-	5614	22	NIC	ENSMUSG00000026153.16	novel	5536	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	12.0657683733739	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATTTCTCATGTTGACT	NA	False	NA	-3	True	ATTAAA	-25	NA	24139414	24050761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24088210_24088289_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
m54284U_201203_174622/8324000/ccs	chr2	-	1749	4	NNC	ENSMUSG00000034226.8	novel	1703	3	NA	NA	-6736	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_3	7.54247233265651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTGTGGTCTCCT	4269	False	NA	-5	True	AATAAA	-17	NA	119108489	119099681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_119100969_119101162_119101222_119101396_119101722_119108411
m54284U_201203_174622/8324148/ccs	chr17	-	2795	13	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	141.926306190533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5806	False	NA	-30	True	AATAAA	-18	NA	46593952	46568799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575019_46575117_46575808_46575905_46582725_46582856_46591341_46591471_46593271_46593366_46593885
m54284U_201203_174622/83297970/ccs	chr11	+	2461	8	NIC	ENSMUSG00000034412.14	novel	1957	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	291	junction_7	26.8639808924097	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGTATAGTTAGGAC	1582	False	NA	24	True	AATAAA	-15	NA	4136821	4165505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
m54284U_201203_174622/83363935/ccs	chr7	+	2373	5	NNC	ENSMUSG00000074220.11	novel	2117	5	NA	NA	0	259	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	11.4537111889553	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTTACTATATGTT	5259	False	NA	NA	False	TATAAA	-14	NA	29821366	29834634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832690
m54284U_201203_174622/83364078/ccs	chr15	+	3294	16	NIC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	0	0	intron_retention	FALSE	canonical	2	32	junction_11	166.360572251961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81548134	81572516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
m54284U_201203_174622/83430045/ccs	chr14	+	6921	17	NIC	ENSMUSG00000021767.20	novel	6165	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	97	junction_7	37.2808177887771	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCGTGTCCTGTCATG	NA	False	NA	10	True	AATAAA	-20	NA	21531501	21722201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_21531622_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
m54284U_201203_174622/83493663/ccs	chr5	+	1520	5	NIC	ENSMUSG00000029538.15	novel	1392	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	927.146967853533	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCGTGCAGTTGTCTTTG	134	False	NA	39	True	AATATA	-18	NA	115465235	115471139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_115465559_115466405_115466764_115468556_115468718_115470175_115470349_115470634
m54284U_201203_174622/83495094/ccs	chr17	-	4130	32	NIC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_30	56.6641161614103	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035586	80887945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80988296_80988355_81035222
m54284U_201203_174622/83495418/ccs	chr12	+	4979	10	NIC	ENSMUSG00000041712.8	novel	3261	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	541	junction_2	47.0864715440554	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCTGATTGTTCT	NA	False	NA	33	True	ATTAAA	-14	NA	102724225	102743966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
m54284U_201203_174622/83559285/ccs	chr7	-	7937	23	NIC	ENSMUSG00000000131.16	novel	4552	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	436	junction_20	39.6651271780337	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGATGGGGCATCTTTG	NA	False	NA	NA	False	AATAAA	-27	NA	125799594	125700887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
m54284U_201203_174622/83561293/ccs	chr6	-	189	1	Intergenic	novelGene_3158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAATACACAAAAACACA	NA	False	NA	NA	False	NA	NA	NA	30844565	30844376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_30844400_30844600
m54284U_201203_174622/83624790/ccs	chr12	+	2852	7	NIC	ENSMUSG00000021134.18	novel	1568	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	562	junction_1	513.606096363957	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTGTTTCTCTCAA	NA	False	NA	NA	False	AATAAA	-23	NA	80992307	80997281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80995943_80996267_80996379_80996493
m54284U_201203_174622/83626102/ccs	chr5	+	721	3	NIC	ENSMUSG00000034211.15	novel	832	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	423.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGCAGCTTGATTTT	791	False	NA	23	True	CATAAA	-12	NA	129792597	129795544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_129792614_129793790_129793931_129794979
m54284U_201203_174622/83626128/ccs	chr9	-	189	1	Intergenic	novelGene_4716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTCCTTGTTATATG	NA	False	NA	NA	False	NA	NA	NA	40150880	40150691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_40150700_40150900
m54284U_201203_174622/83755952/ccs	chr2	-	3533	31	NNC	ENSMUSG00000040479.13	novel	3584	31	NA	NA	92	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	54.0594323150199	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	False	NA	-3	True	AGTAAA	-18	NA	91793910	91763168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765244_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
m54284U_201203_174622/83820574/ccs	chr19	-	2380	14	NIC	ENSMUSG00000041491.9	novel	2548	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	44.4826939288933	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATTGAGTGATAAAATA	175	False	NA	NA	False	AATAAA	-17	NA	15962353	15933136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_15933768_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
m54284U_201203_174622/83821506/ccs	chr2	+	4074	6	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078864.11	novel	1077	4	NA	NA	0	2805	multi-exon	FALSE	canonical	3	88	junction_1	85.4479958805354	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCATGATGTT	NA	False	NA	NA	False	NA	NA	NA	177190007	177415070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177190111_177404638_177404694_177409531_177409569_177409836_177409964_177410168_177410230_177411379
m54284U_201203_174622/83821903/ccs	chr7	+	4161	19	NIC	ENSMUSG00000030816.9	novel	5279	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	259	junction_5	49.6009072497671	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCGTCCATTTGGTC	NA	False	NA	21	True	AATAAA	-22	NA	127187938	127202766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
m54284U_201203_174622/83886296/ccs	chr5	+	2545	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	32.5016025245936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168039	146239684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_146168145_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
m54284U_201203_174622/83886438/ccs	chr14	-	3213	15	NIC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	0	-363	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	124.651514230674	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGAAATACATTAATTT	NA	False	NA	-15	True	AATAAA	-25	NA	67953059	67914166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952937
m54284U_201203_174622/83888116/ccs	chr16	+	6042	8	NIC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-107	0	intron_retention	FALSE	canonical	3	3297	junction_7	344.765107851471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACACTTGCAAAGTG	NA	False	NA	-10	True	ATTAAA	-17	NA	84571166	84619774	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84618191_84619674
m54284U_201203_174622/8391318/ccs	chrX	+	1781	12	NIC	ENSMUSG00000039382.13	novel	1609	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	75.0007162500234	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGGGTGGGGCGTGCTT	4018	False	NA	17	True	AATAAA	-30	NA	7588467	7594440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_7588618_7589803_7589993_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
m54284U_201203_174622/83953464/ccs	chr6	+	1905	12	NNC	ENSMUSG00000038388.15	novel	2161	13	NA	NA	0	-234	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_11	310.924428117187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGACAAAAGAGCAATGAC	NA	False	NA	NA	False	NA	NA	NA	50087228	50173304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50172997
m54284U_201203_174622/84017429/ccs	chr19	+	4029	26	NIC	ENSMUSG00000024740.11	novel	4459	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	49	junction_23	671.529935594833	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTATTGGTCTCTGC	630	False	NA	56	True	AATAAA	-16	NA	10582950	10607183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10605125_10605229_10605788_10605913_10606442
m54284U_201203_174622/84017921/ccs	chr9	+	2651	13	NIC	ENSMUSG00000032411.16	novel	2646	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	119.273029455764	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_96078614_96084183_96084242_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201203_174622/84083232/ccs	chr11	+	3820	6	NNC	ENSMUSG00000020794.14	novel	3815	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	310.886217127746	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGAGCTATTTTGGTTTT	NA	False	NA	11	True	AATAAA	-20	NA	72498108	72577307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568715_72570194_72570319_72574349
m54284U_201203_174622/84084026/ccs	chr16	-	3983	10	NNC	ENSMUSG00000003166.21	novel	4045	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	172.100745688875	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGGTCAGTTCTTGCTGT	NA	False	NA	-2	True	AATAAA	-18	NA	17709557	17658218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667597_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
m54284U_201203_174622/84084763/ccs	chr7	+	1148	7	ISM	ENSMUSG00000003273.15	ENSMUST00000003360.10	1585	9	1173	73	0	0	3prime_fragment	FALSE	canonical	3	16	junction_2	3.86221007541882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCTCGGTGGTTTA	NA	False	NA	3	True	ATTAAA	-14	NA	45350439	45354033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_45350791_45351857_45352044_45352256_45352353_45352485_45352559_45352882_45353038_45353136_45353303_45353912
m54284U_201203_174622/84149335/ccs	chr1	+	2059	1	Intergenic	novelGene_499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGTCTGAGGCTATAAG	NA	False	NA	NA	False	NA	NA	NA	178964957	178967016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_178965000_178967000
m54284U_201203_174622/84149819/ccs	chr6	-	1451	1	Intergenic	novelGene_3467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAGATGGGTAGATTT	5833	False	NA	NA	False	NA	NA	NA	120816901	120815450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120815400_120816900
m54284U_201203_174622/84150181/ccs	chr17	+	632	4	NNC	ENSMUSG00000023987.15	novel	1388	9	NA	NA	5798	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_1	164.050805138733	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCTGTTGAGTCATTT	NA	False	NA	16	True	AATAAA	-16	NA	48043566	48045407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_48043651_48043885_48044037_48044681_48044781_48045109
m54284U_201203_174622/84150869/ccs	chr5	+	3698	4	NNC	ENSMUSG00000046079.17	novel	3923	3	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_3	227.690335519294	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGTGGTTCACAACCTT	4124	False	NA	19	True	AATAAA	-30	NA	105847887	105963076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_105848121_105880095_105880241_105959589_105960029_105960195
m54284U_201203_174622/84346830/ccs	chr17	+	1238	7	NIC	ENSMUSG00000073423.11	novel	1211	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	176.614143135694	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTACCTATGCCTTC	4917	False	NA	29	True	AATACA	-19	NA	33848063	33850690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_33848191_33848595_33848673_33848743_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
m54284U_201203_174622/84346945/ccs	chrX	+	5877	34	NIC	ENSMUSG00000025862.15	novel	294	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	42.0706694798964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTATCTCTTGTAATC	NA	False	NA	19	True	AATAAA	-22	NA	41239890	41366062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_41239966_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
m54284U_201203_174622/84347454/ccs	chr3	-	175	1	Intergenic	novelGene_1630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAATAACAGCACT	NA	False	NA	NA	False	NA	NA	NA	108506945	108506770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108506800_108506900
m54284U_201203_174622/84411894/ccs	chr7	+	1984	10	NNC	ENSMUSG00000041769.14	novel	2081	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	206.009169159476	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGCAGTCTTTATTT	NA	False	NA	20	True	AATAAA	-34	NA	138448087	138484786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474633_138474729_138474781_138475848_138476014_138478184_138478447_138483937
m54284U_201203_174622/84411972/ccs	chr15	+	5880	23	NNC	ENSMUSG00000022272.18	novel	618	2	NA	NA	-1448	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	161.056846645027	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTCCTTGAGTAG	1581	False	NA	16	True	AATAAA	-17	NA	25751547	25813759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_25751717_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
m54284U_201203_174622/84476978/ccs	chr11	+	170	1	Intergenic	novelGene_6312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAGTCTAGCTAAAT	NA	False	NA	5	True	NA	NA	NA	99002685	99002855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_99002700_99002900
m54284U_201203_174622/84478624/ccs	chr11	-	7244	21	NNC	ENSMUSG00000017291.14	novel	12409	20	NA	NA	0	-5228	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_19	10.1975487250613	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGGCGTTTTAAAACT	8151	False	NA	NA	False	AATAAA	-17	NA	77498641	77425215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77492524_77492588_77498033
m54284U_201203_174622/84541498/ccs	chr1	-	6909	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-222	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_39	275.370528595629	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7665	False	NA	17	True	NA	NA	NA	84817254	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772046_84773410_84773537_84792543_84792691_84816949
m54284U_201203_174622/84544193/ccs	chr13	-	2457	10	NIC	ENSMUSG00000021377.16	novel	2556	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_7	480.043233649678	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTATTTAATCTTT	NA	False	NA	-15	True	AATAAA	-20	NA	47259677	47238257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255448_47255551_47259047_47259214_47259548
m54284U_201203_174622/8455366/ccs	chr19	+	2956	1	FSM	ENSMUSG00000065087.3	ENSMUST00000083153.3	126	1	-2379	-451	-2379	451	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTGTGATGGCTTATT	NA	False	NA	25	True	AATAAA	-14	NA	8700850	8703806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_+_8700800_8703800
m54284U_201203_174622/8455469/ccs	chr2	+	5013	12	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	983	intron_retention	FALSE	canonical	3	2774	junction_1	169.054590429999	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896536	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201203_174622/8456250/ccs	chr2	-	157	1	Intergenic	novelGene_875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACAAAATTTTTTT	6991	False	NA	NA	False	NA	NA	NA	75678522	75678365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_75678400_75678500
m54284U_201203_174622/8456345/ccs	chr17	-	178	1	Intergenic	novelGene_8598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAATAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	43248503	43248325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_43248300_43248500
m54284U_201203_174622/84609284/ccs	chr17	+	3717	19	NIC	ENSMUSG00000024044.20	novel	4047	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	13.0085442007252	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCGTCTTCCATGTGAA	NA	False	NA	20	True	AATAAA	-21	NA	69463804	69596984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569174_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69595845
m54284U_201203_174622/84674679/ccs	chr1	+	2037	7	NIC	ENSMUSG00000026404.13	novel	2166	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_6	23.4004985701872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTATTTATTTCAGTCCT	NA	False	NA	10	True	AATAAA	-16	NA	136343008	136367896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136367490
m54284U_201203_174622/84675007/ccs	chrX	+	5667	26	NNC	ENSMUSG00000025332.15	novel	5900	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	164	junction_4	108.400487083777	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAGAAAAAAAAAAGCAAAA	NA	False	NA	-20	True	AATAAA	-35	NA	151016249	151056768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
m54284U_201203_174622/84738822/ccs	chr17	+	1195	1	NIC	ENSMUSG00000023967.10	novel	884	6	NA	NA	0	-10937	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGCAGATAGATAAACT	NA	False	NA	NA	False	NA	NA	NA	46421921	46423116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_46421900_46423100
m54284U_201203_174622/84739433/ccs	chr13	-	5813	7	NIC	ENSMUSG00000041431.17	novel	2140	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	3352	junction_4	264.617176313254	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGCCCTTTTGACTG	NA	False	NA	-6	True	AATAAA	-28	NA	100922994	100915239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100922127_100922240_100922412_100922889
m54284U_201203_174622/84739756/ccs	chr11	+	2902	24	NNC	ENSMUSG00000020549.15	novel	2884	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_18	71.7489584835784	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCAGTGTGGGGTC	NA	False	NA	15	True	AATAAA	-15	NA	64869896	64892426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889318_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
m54284U_201203_174622/84803978/ccs	chr9	-	188	1	Intergenic	novelGene_4737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCCACAACCTCTTCAA	NA	False	NA	NA	False	NA	NA	NA	44488828	44488640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_44488600_44488800
m54284U_201203_174622/84804440/ccs	chr7	-	4900	12	NIC	ENSMUSG00000044702.14	novel	3750	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_8	28.4038176924183	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTGGCTTGTTCTAT	NA	False	NA	-3	True	AATAAA	-17	NA	121732208	121706487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_121706952_121709904_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
m54284U_201203_174622/84805221/ccs	chr6	+	4554	9	NNC	ENSMUSG00000035158.16	novel	2113	10	NA	NA	16097	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	18.3059928711884	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTTGACCAGTTGTG	4132	False	NA	5	True	ATTAAA	-16	NA	97933975	97998310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_97934147_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
m54284U_201203_174622/84869465/ccs	chr3	-	3881	11	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	56	junction_7	53.5545516272893	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865620	65853571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
m54284U_201203_174622/84869481/ccs	chr11	+	5346	18	NIC	ENSMUSG00000059474.14	novel	3785	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	41.2407061984984	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93777032	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_93777243_93777847_93777900_93782164_93782215_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
m54284U_201203_174622/84871349/ccs	chr9	+	2035	6	Fusion	ENSMUSG00000040652.17_ENSMUSG00000032387.16	novel	1987	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_1	175.270077309277	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTCTGTCTTTTTATTC	NA	False	NA	23	True	AATAAA	-17	NA	65537840	65597582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr9_+_65538180_65582445_65582516_65593477_65593636_65595079_65595256_65596102_65596189_65596376
m54284U_201203_174622/84936237/ccs	chr19	+	4016	5	NIC	ENSMUSG00000047731.18	novel	3911	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	53.5583793630838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATCTCCTGCCGCTCCTT	NA	False	NA	20	True	AATAAA	-21	NA	46587562	46645824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_46587733_46595150_46595199_46632791_46633007_46640912_46641075_46642403
m54284U_201203_174622/85066937/ccs	chr1	+	4672	12	NIC	ENSMUSG00000026554.16	novel	2754	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	418	junction_1	53.8065097908029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATTCTCTATGAATCCA	NA	False	NA	56	True	TTTAAA	-6	NA	171975684	172023074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172016637_172020084_172020205_172021351_172021469_172022122
m54284U_201203_174622/85131316/ccs	chr9	-	6362	48	NIC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_26	43.3008572341404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGGTGTGCTGACAG	6256	False	NA	NA	False	TTTAAA	-18	NA	21763931	21711475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
m54284U_201203_174622/85131840/ccs	chr9	+	3711	15	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	228	junction_1	20.4605144867187	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGTACGTGTATGAGTGG	4420	False	NA	18	True	AATAAA	-45	NA	77661816	77701767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
m54284U_201203_174622/85132665/ccs	chr3	-	211	1	Intergenic	novelGene_1621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCCAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	107254866	107254655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_107254700_107254900
m54284U_201203_174622/85133094/ccs	chr8	-	1136	4	NIC	ENSMUSG00000034424.6	novel	1443	5	NA	NA	65	-162	combination_of_known_splicesites	FALSE	canonical	3	83	junction_3	974.020647739165	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATTGTGATTTTTATTT	NA	False	NA	-9	True	AATAAA	-16	NA	117720211	117708710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_117709466_117710546_117710679_117714051_117714116_117720026
m54284U_201203_174622/85197910/ccs	chr19	-	1238	6	NIC	ENSMUSG00000024962.14	novel	1281	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_5	99.8651090221204	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTGCTTCTGTCATTGT	4758	False	NA	-1	True	GATAAA	-17	NA	6965019	6959840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964719
m54284U_201203_174622/85199312/ccs	chr9	+	4362	10	ISM	ENSMUSG00000032816.16	ENSMUST00000213533.2	6220	20	26909	0	26860	0	3prime_fragment	TRUE	canonical	3	6	junction_3	2.94811092476036	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTGCTCTCTCTCTTT	2898	False	NA	4	True	AATAAA	-12	NA	65035676	65045222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
m54284U_201203_174622/8520714/ccs	chr3	+	2818	16	NNC	ENSMUSG00000063052.10	novel	4142	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	282.785871091342	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTATAGTGTTTTTGTT	NA	False	NA	29	True	AATAAA	-44	NA	157742338	157772726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157755737_157755852_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
m54284U_201203_174622/85263071/ccs	chr2	+	1060	6	NIC	ENSMUSG00000038900.18	novel	1242	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	2580	junction_5	1481.81753262674	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTTGGCTGCTTTTTGG	5802	False	NA	24	True	AATAAA	-23	NA	32851731	32854057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853596_32853752_32853866_32854002
m54284U_201203_174622/852741/ccs	chr4	-	1373	5	NNC	ENSMUSG00000029007.9	novel	3996	5	NA	NA	0	596	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_4	478.358913369449	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCACCCTGCTGTCTTG	NA	False	NA	-25	True	NA	NA	NA	148172488	148164377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172136
m54284U_201203_174622/85329140/ccs	chr10	+	2676	13	NNC	ENSMUSG00000037455.17	novel	2837	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	32.814715533668	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATTGTATTCATTCAAA	NA	False	NA	24	True	AATAAA	-17	NA	23672883	23703866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_23673082_23674643_23674784_23679659_23679752_23680085_23680160_23681790_23681939_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
m54284U_201203_174622/85329722/ccs	chr12	+	5266	15	NIC	ENSMUSG00000021112.10	novel	5283	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_7	16.9175672492428	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCACTGGACACTTTC	NA	False	NA	16	True	AATAAA	-25	NA	78795680	78887360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_78795720_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
m54284U_201203_174622/85330083/ccs	chr8	-	172	1	Intergenic	novelGene_4208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAACAGAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	13262229	13262057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_13262100_13262200
m54284U_201203_174622/853771/ccs	chr9	+	203	1	Intergenic	novelGene_4930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTACAAATATAGTTAG	3031	False	NA	NA	False	NA	NA	NA	72464827	72465030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_72464800_72465000
m54284U_201203_174622/85393495/ccs	chrX	+	2281	6	NNC	ENSMUSG00000033460.15	novel	2413	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	59.4151495832502	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCACTGTCTTTGT	NA	False	NA	NA	False	AATAAA	-20	NA	133618711	133622659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620823
m54284U_201203_174622/85394280/ccs	chr18	-	5346	29	NNC	ENSMUSG00000033382.16	novel	5194	29	NA	NA	-287	-90	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_23	35.6899917372375	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATTTATTAGATGCCT	NA	False	NA	-112	True	AATAAA	-17	NA	21029437	20950369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999219_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
m54284U_201203_174622/85524600/ccs	chr4	-	177	1	Intergenic	novelGene_2407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTAAAAGCTGGTC	6988	False	NA	NA	False	NA	NA	NA	152113809	152113632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_152113600_152113800
m54284U_201203_174622/85526770/ccs	chr5	+	6527	46	NIC	ENSMUSG00000029516.20	novel	9514	47	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	7.55215609798917	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTTTGTTTTATTGA	8481	False	NA	NA	False	AATAAA	-16	NA	115983336	116136557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_115983361_115984405_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732
m54284U_201203_174622/85526898/ccs	chr4	+	2754	1	Intergenic	novelGene_2357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGAGCGGGACACTTAG	NA	False	NA	NA	False	AATGAA	-27	NA	147420811	147423565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_147420800_147423600
m54284U_201203_174622/85655597/ccs	chr9	-	2355	1	Antisense	novelGene_ENSMUSG00000049305.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGCGGCTTGAGCCAGG	5308	False	NA	NA	False	NA	NA	NA	108342425	108340070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_108340100_108342400
m54284U_201203_174622/85656701/ccs	chr17	+	2418	5	NIC	ENSMUSG00000002660.9	novel	983	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	1307	junction_3	101.465511381947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAAGCACCTTCCATT	NA	False	NA	33	True	ATTAAA	-21	NA	57297304	57303188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_57297514_57297605_57297678_57298293_57300014_57300447_57300554_57302877
m54284U_201203_174622/85657583/ccs	chr10	+	3418	12	NIC	ENSMUSG00000015757.11	novel	3471	13	NA	NA	0	-575	intron_retention	FALSE	canonical	3	182	junction_11	34.8541233910046	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATCAGCTTACTTTTTT	1139	False	NA	7	True	AGTAAA	-12	NA	7668671	7698324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
m54284U_201203_174622/85721789/ccs	chr1	-	4088	7	NIC	ENSMUSG00000044783.17	novel	4878	8	NA	NA	0	-638	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	127.053029173736	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGGTCTGCCCTGCGGAC	8645	False	NA	-15	True	AATAAA	-23	NA	88205301	88190830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_88194381_88195669_88195749_88197042_88197136_88200450_88200488_88202763_88202820_88204940_88205008_88205095
m54284U_201203_174622/85723223/ccs	chr2	+	4659	13	NIC	ENSMUSG00000001768.17	novel	1668	5	NA	NA	124	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.53847895759369	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGTCTTTTTTGTTG	NA	False	NA	NA	False	NA	NA	NA	145517410	145729536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_145517505_145554374_145554499_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
m54284U_201203_174622/85723620/ccs	chr9	+	2217	8	NIC	ENSMUSG00000015656.18	novel	2394	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	7746	junction_3	4368.47570669679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTCCTGACTGAGT	2459	False	NA	10	True	AATAAA	-20	NA	40712571	40716496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_40712645_40713213_40713424_40713713_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
m54284U_201203_174622/85787875/ccs	chr2	-	2785	13	NIC	ENSMUSG00000027198.17	novel	2871	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	114.321519068906	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	False	NA	-11	True	ATTAAA	-19	NA	93652910	93525975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_93526617_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
m54284U_201203_174622/85788089/ccs	chr8	+	2470	3	ISM	ENSMUSG00000031480.16	ENSMUST00000162447.2	3273	4	15897	473	15897	-473	3prime_fragment	FALSE	canonical	2	2	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGCATTTTGAACA	NA	False	NA	NA	False	AATAAA	-17	NA	22733274	22749920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_22733973_22742168_22742328_22748307
m54284U_201203_174622/85788944/ccs	chr15	+	4154	7	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	67.1912692741153	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	917	False	NA	25	True	AATAAA	-26	NA	102112093	102124041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102112238_102113005_102113522_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
m54284U_201203_174622/85789403/ccs	chr19	+	201	1	Intergenic	novelGene_9145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAACTTCTTTTGAAGA	NA	False	NA	NA	False	NA	NA	NA	7473695	7473896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_7473700_7473900
m54284U_201203_174622/85853009/ccs	chr14	-	3900	19	NNC	ENSMUSG00000035161.8	novel	10883	18	NA	NA	0	-7205	intron_retention	FALSE	canonical	3	18	junction_14	156.302502290342	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGTGTGGTTTAGGAAA	NA	False	NA	-6	True	AATAAA	-13	NA	62998587	62930457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_62931124_62933147_62933242_62934041_62934405_62938109_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951292_62951741_62951868_62953747_62953932_62971076_62971300_62981357_62981448_62996649_62996800_62997614_62997693_62997996
m54284U_201203_174622/8585331/ccs	chr11	+	4597	30	NIC	ENSMUSG00000010342.17	novel	4763	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	29.2016239184881	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTGCCAGTTGTGATT	NA	False	NA	14	True	AATAAA	-20	NA	87295890	87446649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87295997_87324634_87324772_87365229_87365345_87377074_87377212_87383865_87383948_87385777_87385909_87387025_87387140_87388655_87388780_87390309_87390489_87400393_87400546_87402250_87402442_87402958_87403110_87404767_87405688_87407493_87407601_87410480_87410564_87411463_87411746_87413320_87413422_87418669_87418737_87423172_87423255_87424364_87424428_87426358_87426487_87427520_87427727_87429391_87429489_87429821_87429897_87433315_87433394_87434109_87434204_87440257_87440351_87442356_87442467_87445753_87445806_87446309
m54284U_201203_174622/85854365/ccs	chr11	+	3863	18	NIC	ENSMUSG00000011877.14	novel	3476	19	NA	NA	-243	0	intron_retention	TRUE	canonical	3	379	junction_14	39.5094487406796	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGAGGTGGGGCTTAGC	NA	False	NA	30	True	AATAAA	-33	NA	77384144	77398612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
m54284U_201203_174622/85855003/ccs	chr5	+	1593	10	NIC	ENSMUSG00000029622.17	novel	3105	10	NA	NA	0	103	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	581.185952265805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGTGGCACTCGCTTTT	8118	False	NA	34	True	AATAAA	-20	NA	145051110	145065001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_145051234_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
m54284U_201203_174622/8586419/ccs	chr8	+	3526	17	NNC	ENSMUSG00000031565.19	novel	3332	11	NA	NA	-7430	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	82.2093364527412	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26038202	26064801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_26038487_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
m54284U_201203_174622/8587053/ccs	chr15	+	1178	7	NIC	ENSMUSG00000022551.9	novel	1791	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	306	junction_1	1622.00972733074	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACATTTTAGCTGGTCA	NA	False	NA	25	True	AATAAA	-15	NA	76227732	76230132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_76227893_76228505_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
m54284U_201203_174622/8587786/ccs	chr3	-	2039	14	NIC	ENSMUSG00000028099.9	novel	2390	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_13	58.8212617035912	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTATCTGTTCTTAG	NA	False	NA	NA	False	AATAAA	-17	NA	96634792	96618838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96634664
m54284U_201203_174622/85920383/ccs	chr11	-	1596	11	NIC	ENSMUSG00000020471.12	novel	1646	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_9	855.114033331228	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAACCTTGTTCACTT	9585	False	NA	-6	True	AATAAA	-17	NA	5828212	5822187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825214_5826712_5826990_5828191
m54284U_201203_174622/85984673/ccs	chr12	+	4497	22	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_17	450.308495918741	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750969	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794542_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
m54284U_201203_174622/85985896/ccs	chr1	+	4079	8	NIC	ENSMUSG00000026634.17	novel	3714	9	NA	NA	0	-460	intron_retention	FALSE	canonical	3	110	junction_1	33.9861916738224	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATTCCAGTTGTTT	NA	False	NA	22	True	AATAAA	-22	NA	190660688	190678699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190674445_190675026_190675085_190675973_190676138_190677136
m54284U_201203_174622/86049808/ccs	chr8	+	186	1	Intergenic	novelGene_4225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	502	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAGTAAGAGA	NA	False	NA	NA	False	AATAAA	-6	NA	22913650	22913836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_22913600_22913800
m54284U_201203_174622/86114501/ccs	chr2	-	2625	6	NIC	ENSMUSG00000027371.11	novel	1462	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	3	junction_4	40.7499693251418	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTAGCTTCCACTGTCTT	NA	False	NA	-5	True	AATAAA	-18	NA	127286485	127278135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_127278327_127278465_127278554_127278656_127280490_127282305_127282419_127283793_127284045_127286336
m54284U_201203_174622/86115812/ccs	chr6	+	4536	14	NIC	ENSMUSG00000001632.17	novel	4603	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_7	58.3643929709194	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTTGCCTTCTACTA	261	False	NA	28	True	AATAAA	-16	NA	113284126	113301821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113284299_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
m54284U_201203_174622/86116344/ccs	chr6	-	3447	13	NNC	ENSMUSG00000059182.9	novel	3382	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	141.475753713804	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	828	False	NA	-5	True	AATAAA	-18	NA	51989529	51834401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_51836616_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
m54284U_201203_174622/86180160/ccs	chr12	+	2284	6	NIC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_5	95.7747357083276	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7396	False	NA	4	True	ATTAAA	-15	NA	16860963	16876753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
m54284U_201203_174622/86246288/ccs	chr9	+	3197	2	NNC	ENSMUSG00000079260.4	novel	2921	2	NA	NA	345	333	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTAGTTAGCTGAGG	NA	False	NA	NA	False	NA	NA	NA	114230517	114236677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_114230626_114233588
m54284U_201203_174622/86247422/ccs	chr7	-	6613	33	NIC	ENSMUSG00000063550.9	novel	6694	33	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_32	42.9167867615634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGGTATTGACTTTCT	9979	False	NA	-6	True	AATAAA	-20	NA	101859074	101768604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101858945
m54284U_201203_174622/86311444/ccs	chr4	-	2301	9	NIC	ENSMUSG00000028232.14	novel	2690	8	NA	NA	0	-222	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	22.1722658968361	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTGAGATTCTTC	280	False	NA	NA	False	AATAAA	-31	NA	3574853	3549262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569464_3569630_3569753_3570320_3570373_3574703
m54284U_201203_174622/86311938/ccs	chr19	-	3621	13	NIC	ENSMUSG00000024966.10	novel	2108	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	2912	junction_9	217.848316240656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACGGTCTCCAGTGACTTT	3763	False	NA	-8	True	AATAAA	-29	NA	7017335	6998069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7011673_7012014_7012157_7012863_7013074_7017247
m54284U_201203_174622/86377237/ccs	chr7	-	6809	27	NIC	ENSMUSG00000030516.15	novel	7049	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	43	junction_1	33.0858664117024	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTTTGGTTTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	65020987	64945912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
m54284U_201203_174622/86442567/ccs	chr6	-	2150	11	NIC	ENSMUSG00000001518.13	novel	2320	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	13	junction_8	79.0465685529739	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGCTCTCCAATCTGGAC	NA	False	NA	0	True	AATAAA	-24	NA	128401893	128386406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128393219_128393262_128394579_128394676_128401680
m54284U_201203_174622/86443089/ccs	chr6	+	4719	13	NIC	ENSMUSG00000001630.14	novel	4550	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	136	junction_9	10.5155308419922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGATCAGTCAATGGAC	NA	False	NA	11	True	ATTAAA	-21	NA	146626492	146678054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
m54284U_201203_174622/86507656/ccs	chr11	-	170	1	Intergenic	novelGene_6085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79606896	79606726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79606700_79606900
m54284U_201203_174622/86508434/ccs	chr10	-	2536	10	NIC	ENSMUSG00000019814.6	novel	2297	11	NA	NA	55	-461	intron_retention	FALSE	canonical	3	645	junction_6	44.5606813344192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACGGAATTGGTGTGCTC	NA	False	NA	-23	True	GATAAA	-25	NA	13068857	13054344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
m54284U_201203_174622/86508483/ccs	chr17	+	5702	16	NIC	ENSMUSG00000041057.11	novel	3450	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	1341	junction_7	110.136077447654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGTGTCTCGTGGTGTATA	NA	False	NA	18	True	AATAAA	-18	NA	71923209	71966026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
m54284U_201203_174622/86508623/ccs	chr9	-	1757	8	NIC	ENSMUSG00000032366.16	novel	1797	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_4	194.584329339466	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTGGAAGTTAGTGGT	NA	False	NA	-9	True	AATAAA	-15	NA	66951189	66936129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
m54284U_201203_174622/8651609/ccs	chr15	+	239	1	Intergenic	novelGene_8016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATATTTCCTAAT	NA	False	NA	NA	False	NA	NA	NA	102809570	102809809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_102809600_102809800
m54284U_201203_174622/8651869/ccs	chr11	+	3808	27	NIC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	202.96016457021	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6800	False	NA	40	True	AATAAA	-25	NA	115714874	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115715004_115723487_115723745_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746291
m54284U_201203_174622/8652219/ccs	chr10	+	1653	8	NNC	ENSMUSG00000071072.13	novel	2000	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_6	1319.10309665008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGATTTCTTGG	903	False	NA	-1	True	TTTAAA	-22	NA	127894879	127912847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910158_127911206_127911232_127911935
m54284U_201203_174622/8652345/ccs	chr7	+	3241	6	NNC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	351.347691041225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_43897484_43897675_43897720_43898877_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/86639676/ccs	chr11	+	3329	24	NNC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	30191	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_19	115.052351033175	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCATAATTTGTTC	2027	False	NA	8	True	NA	NA	NA	87018013	87141700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87097589_87097780_87100594_87100714_87107262_87107374_87109077_87109157_87141416
m54284U_201203_174622/86704155/ccs	chr9	-	2558	1	FSM	ENSMUSG00000070282.7	ENSMUST00000133495.3	1008	1	-1352	-198	-27	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAACCAAAAACAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	109661801	109659243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_109659200_109661800
m54284U_201203_174622/86770645/ccs	chr7	-	2923	10	NNC	ENSMUSG00000035354.10	novel	3147	11	NA	NA	-15780	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	50.8374315287903	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGATTTCCCCCCCAG	NA	False	NA	-18	True	AATAAA	-19	NA	98681631	98535956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98681355
m54284U_201203_174622/86771224/ccs	chr13	-	1307	12	NNC	ENSMUSG00000069089.9	novel	1988	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_8	212.492916751174	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGATTTATGATTAGAG	NA	False	NA	-29	True	AATAAA	-3	NA	100867447	100839817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857095_100857162_100859187_100859222_100866965_100867026_100867281
m54284U_201203_174622/86836426/ccs	chr9	-	4276	1	Antisense	novelGene_ENSMUSG00000053641.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	4166	False	NA	NA	False	NA	NA	NA	64825959	64821683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_64821700_64826000
m54284U_201203_174622/86837607/ccs	chr11	-	2483	1	Antisense	novelGene_ENSMUSG00000043372.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTGCCTTTTTTTTCT	4668	False	NA	NA	False	ATTAAA	-12	NA	103023686	103021203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_103021200_103023700
m54284U_201203_174622/86837712/ccs	chr6	+	196	1	Intergenic	novelGene_3180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATGGATGCTGGGGAGC	NA	False	NA	NA	False	NA	NA	NA	37432322	37432518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_37432300_37432500
m54284U_201203_174622/86838044/ccs	chr6	-	3984	19	NIC	ENSMUSG00000035245.13	novel	4424	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_17	11.1428712748068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGAACATCTTCAGGAT	NA	False	NA	-6	True	AATAAA	-22	NA	97125885	97086984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97124970_97125151_97125220_97125792
m54284U_201203_174622/86901597/ccs	chr11	-	4013	15	NIC	ENSMUSG00000061306.17	novel	4554	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_13	156.31776897704	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCGAGTCGAGTTGGT	4996	False	NA	-12	True	AATAAA	-12	NA	120042172	119995277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_119996860_119997259_119997437_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120038546_120038665_120041805
m54284U_201203_174622/86902630/ccs	chr1	+	3456	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	95.0542666557765	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAAGTATACATGCTTGT	NA	False	NA	9	True	AATAAA	-18	NA	132405104	132433397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418216_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
m54284U_201203_174622/86966308/ccs	chr4	+	2984	9	NIC	ENSMUSG00000059939.14	novel	2660	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	85	junction_1	49.4621067080649	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGAGGTCATGATGTC	8271	False	NA	22	True	NA	NA	NA	156194454	156211722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
m54284U_201203_174622/86968427/ccs	chr7	+	4233	28	NIC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_20	54.7169546878799	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285674	35338651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
m54284U_201203_174622/87031816/ccschrUn	chrUn_JH584304v1	-	2945	5	Intergenic	novelGene_9774	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	227	junction_3	261.431157286196	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_55702_58563_58836_59591
m54284U_201203_174622/87033053/ccs	chr10	-	5192	12	NIC	ENSMUSG00000040043.18	novel	1481	13	NA	NA	-166	2088	combination_of_known_splicesites	FALSE	canonical	2	10	junction_9	88.1342889717843	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTAGTGTCATCCATGGT	NA	False	NA	-2	True	AATAAA	-15	NA	128012514	127965338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127982470_127982530_127987051_127987225_128012218
m54284U_201203_174622/87033528/ccs	chr12	+	3690	13	NIC	ENSMUSG00000035597.20	novel	3457	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	127	junction_7	93.07714094592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTGTTGATGAATTCAT	7508	False	NA	20	True	AATAAA	-17	NA	65083107	65108930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102207_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201203_174622/87164255/ccs	chrX	+	4823	24	NIC	ENSMUSG00000034480.19	novel	4480	23	NA	NA	0	310	combination_of_known_junctions	FALSE	canonical	3	79	junction_22	13.9859502820869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATTATTGTACAAATTA	NA	False	NA	NA	False	AATAAA	-10	NA	128650490	129081530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_128650866_128702143_128702177_128704761_128704939_128721987_128722093_128726675_128726697_128803648_128803789_128839993_128840069_128840151_128840222_128843647_128843785_128844591_128844701_128853421_128853533_128856642_128856762_128857991_128858109_128860792_128860912_128863668_128863734_128867274_128867380_128872027_128872343_128873243_128873359_128948073_128948176_128951115_128951211_128974570_128974673_128989275_128989516_129010000_129010131_129079684
m54284U_201203_174622/8717924/ccs	chr9	-	5108	13	NIC	ENSMUSG00000025234.12	novel	6971	14	NA	NA	-52	-1851	combination_of_known_splicesites	FALSE	canonical	3	22	junction_12	108.59593173268	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTAGTTACTTATGTT	NA	False	NA	-8	True	AATAAA	-20	NA	59393953	59297391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59393261
m54284U_201203_174622/8718745/ccs	chr1	+	3661	8	NNC	ENSMUSG00000026254.18	novel	3473	8	NA	NA	0	-237	intron_retention	FALSE	canonical	3	16	junction_7	1019.03467726539	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTGGACTTGT	NA	False	NA	15	True	AATAAA	-18	NA	87141700	87167973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87164477_87164571_87165567
m54284U_201203_174622/87228571/ccs	chr7	-	1704	5	NIC	ENSMUSG00000054499.10	novel	1828	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	38.1903129078566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCAGGCTCTCCGGTACT	NA	False	NA	-8	True	AATAAA	-27	NA	24919296	24902264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918457_24919188
m54284U_201203_174622/87229870/ccs	chr12	+	1873	9	NIC	ENSMUSG00000021033.12	novel	1571	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	144.461067419565	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTTGTCATGGACAA	NA	False	NA	13	True	NA	NA	NA	87193938	87211497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_87194283_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
m54284U_201203_174622/87229938/ccs	chr5	+	2778	4	NIC	ENSMUSG00000029581.15	novel	2675	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	2668	junction_3	128.287004624613	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCCGTGTGTGTCTCAGG	NA	False	NA	16	True	AATAAA	-16	NA	142946097	142958938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_142947036_142955659_142956044_142956272_142956441_142957650
m54284U_201203_174622/87294204/ccs	chr14	-	2234	4	NIC	ENSMUSG00000002320.16	novel	2164	6	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	1	6	junction_1	167.004989945411	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTTGGAAGTTTTG	5175	False	NA	51	True	AATAAA	-19	NA	55880828	55873421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55874070_55877841_55878028_55878423_55879046_55880050
m54284U_201203_174622/87296569/ccs	chr11	+	5477	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	70.9265930185725	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540320	74561673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
m54284U_201203_174622/87359802/ccs	chr11	+	2838	13	NIC	ENSMUSG00000020459.15	novel	2741	14	NA	NA	0	178	intron_retention	FALSE	canonical	3	11	junction_2	65.9917924189567	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCCCTTCATTTAA	NA	False	NA	11	True	NA	NA	NA	29476456	29495457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_29476844_29479928_29480155_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
m54284U_201203_174622/87426167/ccs	chr2	+	2162	13	NNC	ENSMUSG00000003283.16	novel	2090	13	NA	NA	-803	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	20.5877188310572	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTCAGCTTCTCTGTCTCC	NA	False	NA	19	True	AATAAA	-29	NA	152949584	152993361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_152949942_152966089_152966208_152970182_152970226_152970962_152971063_152971763_152971863_152973140_152973245_152975988_152976139_152976543_152976697_152978617_152978798_152980181_152980259_152986338_152986493_152990866_152990999_152992866
m54284U_201203_174622/87490654/ccs	chr8	-	6196	15	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	0	-364	combination_of_known_junctions	FALSE	canonical	3	15	junction_12	38.0332829538143	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCAGCCTCTGACATA	NA	False	NA	-1	True	AATAAA	-24	NA	41586763	41444452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41509571_41509722_41529268_41529465_41535650_41537878_41586517
m54284U_201203_174622/87492170/ccs	chr13	-	2554	16	NIC	ENSMUSG00000021635.15	novel	2839	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	52.805134430491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTTCTTATCCTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	100787559	100753671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100780027_100780112_100781498_100781754_100786185_100786290_100787457
m54284U_201203_174622/87557384/ccs	chrX	-	3438	27	NNC	ENSMUSG00000006678.7	novel	3612	2	NA	NA	0	-37629	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	91.9050835302282	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCCAAAGTGTATATTT	4277	False	NA	NA	False	AATAAA	-17	NA	92675761	92561724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_92562161_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
m54284U_201203_174622/87557927/ccs	chr17	+	2970	5	Genic_Genomic	ENSMUSG00000067929.4_ENSMUSG00000073448.4	novel	842	1	NA	NA	-10181	558	multi-exon	FALSE	canonical	3	30	junction_1	5.44862367942584	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATGTTTGTGAGCACCA	NA	False	NA	8	True	AAAACA	-44	NA	21898906	21911579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr17_+_21899118_21900505_21900595_21904941_21905026_21906708_21906836_21909120
m54284U_201203_174622/87624516/ccs	chr5	-	4066	26	NIC	ENSMUSG00000035325.17	novel	4228	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	64	junction_13	204.849353428318	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTAGTCTTTATTTAT	8108	False	NA	-7	True	ATTAAA	-19	NA	100564093	100509507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521283_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
m54284U_201203_174622/87818914/ccs	chr8	-	4115	6	NIC	ENSMUSG00000001910.6	novel	4344	6	NA	NA	26	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_5	237.650499683885	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCTGTGCTCTGCTCA	NA	False	NA	-6	True	AATAAA	-19	NA	85413756	85397107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85403050_85403882_85413676
m54284U_201203_174622/87819592/ccs	chr19	+	6036	36	NNC	ENSMUSG00000025047.10	novel	6761	36	NA	NA	0	-105	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	49.5686207520978	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTGTGTGTAAAAT	NA	False	NA	26	True	NA	NA	NA	47079206	47119585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_47079307_47081226_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
m54284U_201203_174622/87819748/ccs	chr5	+	5163	7	NIC	ENSMUSG00000029178.15	novel	5221	6	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	299.882615923853	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATAATCATGTGATTACT	NA	False	NA	8	True	AATAAA	-16	NA	64960867	64990244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984146_64984226_64984452_64984614_64986319
m54284U_201203_174622/8783251/ccs	chr4	+	5847	30	ISM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	584	0	0	0	3prime_fragment	FALSE	canonical	3	91	junction_25	21.0061991869214	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAATTTGGTTAATTCAT	NA	False	NA	15	True	AATAAA	-15	NA	108317206	108416612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
m54284U_201203_174622/8784173/ccs	chr14	+	4290	40	NIC	ENSMUSG00000021843.18	novel	4484	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	191.410175691672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47886847_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47973556
m54284U_201203_174622/87883873/ccs	chr4	+	1461	6	NIC	ENSMUSG00000037266.19	novel	2151	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_4	383.058011272444	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGATGTTGAATGT	NA	False	NA	21	True	AATAAA	-21	NA	134650936	134654683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_134651079_134651185_134651794_134652603_134652744_134653087_134653133_134654045_134654130_134654241
m54284U_201203_174622/87883953/ccs	chr2	+	3598	11	NIC	ENSMUSG00000033955.14	novel	5885	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	74.1261762132649	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGATTGTGGTGTGTG	NA	False	NA	12	True	AATAAA	-21	NA	84878398	84903392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_84878480_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
m54284U_201203_174622/87884982/ccs	chr4	-	2122	9	NIC	ENSMUSG00000028293.15	novel	2039	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_8	55.3893886498127	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTGCAGTTACTTTGT	-21	True	NA	-13	True	AATAAA	-14	NA	34687438	34663256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34684048_34684132_34687243
m54284U_201203_174622/87885653/ccs	chr10	+	3566	23	NNC	ENSMUSG00000038822.16	novel	3785	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_15	37.8479996087001	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTTATTTGATCTA	1778	False	NA	8	True	AATAAA	-20	NA	45453924	45588367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548647_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45576672_45576772_45577049_45577121_45585976_45586091_45587529
m54284U_201203_174622/87885886/ccs	chr12	+	6982	20	NIC	ENSMUSG00000021244.16	novel	7003	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_17	35.9467134100762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCCTTTTCTCTTATTT	NA	False	NA	32	True	AATAAA	-42	NA	85043094	85117289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85075543_85077662_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85111744_85111876_85116392_85116574_85116878
m54284U_201203_174622/87886176/ccs	chr5	+	3240	13	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	77.4128093764563	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7146	False	NA	16	True	AATAAA	-17	NA	31609778	31639098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31609922_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
m54284U_201203_174622/87886218/ccs	chr17	-	2539	11	NIC	ENSMUSG00000012296.17	novel	2559	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_7	125.623246256415	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTAATTTCTTTCTCCTT	5806	False	NA	-30	True	AATAAA	-18	NA	46593952	46568799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575019_46575117_46575808_46575905_46593271_46593366_46593885
m54284U_201203_174622/87949854/ccs	chr11	+	5304	16	NIC	ENSMUSG00000059474.14	novel	5245	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	37.4358117315492	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93776677	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_93776948_93795984_93796185_93799629_93799764_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
m54284U_201203_174622/87951177/ccs	chr6	-	1962	11	NNC	ENSMUSG00000035378.18	novel	1990	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	80.3295711428861	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGGTGTAAATAATTAG	NA	False	NA	-3	True	AATAAA	-17	NA	100648118	100550043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613955_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
m54284U_201203_174622/88147513/ccs	chr3	+	1851	7	NNC	ENSMUSG00000027667.14	novel	1988	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_1	77.7488835218159	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAAGCTGAAATACTTT	3311	False	NA	22	True	AATAAA	-22	NA	32564812	32574892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_32564882_32567157_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
m54284U_201203_174622/88212393/ccs	chr1	+	3394	4	NNC	ENSMUSG00000041483.15	novel	4933	2	NA	NA	-58217	-1740	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	57.5577005177317	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAGAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	136494421	136556051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_136494541_136551065_136551108_136552598_136552790_136553009
m54284U_201203_174622/88214294/ccs	chr15	-	4713	35	NIC	ENSMUSG00000022607.19	novel	4675	34	NA	NA	0	-230	combination_of_known_splicesites	TRUE	canonical	2	4	junction_31	67.2282946281989	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGGAGCTAACTGACC	1740	False	NA	-9	True	ATTAAA	-19	NA	73294977	73077180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874_73232187_73236889_73237045_73263607_73263730_73266496_73266594_73294857
m54284U_201203_174622/88277991/ccs	chr9	-	6253	7	NIC	ENSMUSG00000047036.9	novel	6189	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_3	36.0262250157977	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTATACAGAAGTTC	NA	False	NA	6	True	AATAAA	-35	NA	122695050	122677974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_122683054_122683771_122683883_122685763_122685891_122686167_122686227_122686534_122686704_122690773_122691410_122694978
m54284U_201203_174622/88278440/ccs	chr4	-	2954	19	NNC	ENSMUSG00000028702.16	novel	3025	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	19	junction_18	118.034272591366	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGGCATGAAAGGGA	NA	False	NA	-55	True	AAGAAA	-38	NA	115980882	115954171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980514_115980610
m54284U_201203_174622/88279472/ccs	chr12	+	1567	11	NNC	ENSMUSG00000059060.16	novel	1759	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	18.8191391939164	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGGGTCTCCAAAGAGTAA	8713	False	NA	7	True	AATAAA	-40	NA	79344124	79861152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_79344197_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374179_79704597_79704695_79813844_79813949_79849963_79850043_79860715
m54284U_201203_174622/88279747/ccs	chr17	+	2254	15	NIC	ENSMUSG00000002372.10	novel	2373	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_5	98.1330833145292	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980383	57018764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
m54284U_201203_174622/88343688/ccs	chr9	+	5554	33	NIC	ENSMUSG00000052911.10	novel	5629	33	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	39.6159295612257	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTTGTCTGGCCTTTG	9107	False	NA	19	True	AATAAA	-16	NA	108357070	108367729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108357114_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
m54284U_201203_174622/88343902/ccs	chr12	+	3209	14	NIC	ENSMUSG00000007411.17	novel	3321	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	157.510251380476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGCACTGTCTCCTAC	736	False	NA	NA	False	ATTAAA	-21	NA	111540956	111622655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_111541536_111559010_111559203_111570944_111570999_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111621703
m54284U_201203_174622/88408232/ccs	chrX	+	2727	3	NIC	ENSMUSG00000072969.3	novel	2779	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	31	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACATTGTTCCAGTTC	NA	False	NA	NA	False	AATAAA	-19	NA	134643481	134648071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_134643728_134645247_134645325_134645667
m54284U_201203_174622/88408943/ccs	chr6	-	2783	13	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	-964	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	342.705443250225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTTAAAGCAAACTTTT	NA	False	NA	-12	True	ATTAAA	-17	NA	148113520	148081540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096696_148096789_148097495_148097598_148100853_148100895_148103993_148104041_148106273_148106383_148108030_148108174_148113467
m54284U_201203_174622/88409601/ccs	chr5	+	3605	6	NIC	ENSMUSG00000029131.15	novel	1024	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_5	773.776608589327	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTGTATTTGGTCAGA	4601	False	NA	13	True	AATAAA	-21	NA	29940992	29962967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29961337_29962545
m54284U_201203_174622/88410737/ccs	chr19	-	1993	14	NIC	ENSMUSG00000024926.11	novel	2154	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_10	117.018432776497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTATCAGGAGTTCTTAC	3626	False	NA	-5	True	AATAAA	-16	NA	5660079	5653043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5659013_5659263_5659401_5659490_5659560_5659879_5659947_5660045
m54284U_201203_174622/88475320/ccs	chr8	-	3339	12	NNC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_3	396.332817817726	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70426975	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_70362625_70364326_70364520_70365572_70365872_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
m54284U_201203_174622/88475704/ccs	chrX	+	3670	26	NNC	ENSMUSG00000001924.16	novel	4071	26	NA	NA	0	-449	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	675.886646117528	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGGAAGAAGTATGTCTA	NA	False	NA	72	True	AATAAA	-41	NA	20529136	20548969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_20529413_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
m54284U_201203_174622/88476020/ccs	chr5	+	2151	19	NIC	ENSMUSG00000029227.16	novel	4769	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_9	215.964760499897	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAAAAGCTTTGTCTTGT	NA	False	NA	22	True	AATAAA	-23	NA	74696163	74756806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
m54284U_201203_174622/8849215/ccs	chr14	+	7804	30	NIC	ENSMUSG00000042323.18	novel	6566	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	48.5772366355259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATCAGCCAGGTTTGG	8247	False	NA	14	True	AATAAA	-21	NA	30741126	30843549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_30741251_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30832371_30832537_30835805_30835962_30838969_30839041_30839156_30839374_30840685
m54284U_201203_174622/8849230/ccs	chr2	+	2566	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	54.5121842462079	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201203_174622/8849428/ccs	chr11	-	3222	15	NNC	ENSMUSG00000020717.20	novel	3283	15	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_3	462.558633900523	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106562567_106562625_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
m54284U_201203_174622/88540498/ccs	chr5	+	2503	16	NIC	ENSMUSG00000005514.15	novel	918	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	64.9938116712319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	1634	False	NA	14	True	AATAAA	-14	NA	135698886	135764180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_135698971_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
m54284U_201203_174622/88540584/ccs	chr17	+	3918	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_23	178.98133980949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361898_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365242_35365330_35365732_35365880_35366116
m54284U_201203_174622/88604780/ccs	chr18	+	174	1	Intergenic	novelGene_8903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAAGAAGAAGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	36038335	36038509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_36038300_36038500
m54284U_201203_174622/88606567/ccs	chr9	-	5973	24	NIC	ENSMUSG00000050730.18	novel	6116	23	NA	NA	0	-245	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	8.11449262420049	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGTGTGAAGAAGCAT	9	False	NA	0	True	AATAAA	-21	NA	9239106	8994574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
m54284U_201203_174622/88607208/ccs	chr1	-	4826	2	Antisense	novelGene_ENSMUSG00000088363.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	321	junction_1	0	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	NA	False	NA	NA	False	NA	NA	NA	118612898	118608035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_118609412_118609448
m54284U_201203_174622/88670309/ccs	chr11	+	765	2	ISM	ENSMUSG00000110344.2	ENSMUST00000134929.8	2031	4	61772	0	61772	0	3prime_fragment	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCAATCTTTTTTAATG	NA	False	NA	NA	False	AATAAA	-16	NA	90140281	90142081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_90140562_90141596
m54284U_201203_174622/88737049/ccs	chr16	+	6077	31	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	37.8088173137784	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959842	20051323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
m54284U_201203_174622/88737701/ccs	chr7	-	3415	9	NIC	ENSMUSG00000030733.11	novel	3089	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	198	junction_8	37.1247895616931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTGTGGCTGATATTTG	8177	False	NA	-1	True	AATAAA	-28	NA	126074302	126066165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126066946_126067121_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
m54284U_201203_174622/88802194/ccs	chr16	-	4314	22	NIC	ENSMUSG00000037965.16	novel	3825	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	105	junction_12	19.807348781693	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGGTGTGGTCCTTTCT	NA	False	NA	1	True	AATAAA	-28	NA	10994206	10954455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
m54284U_201203_174622/88802953/ccs	chr11	+	4012	14	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	0	94	combination_of_known_splicesites	FALSE	canonical	3	66	junction_2	141.20424587545	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTGCTAAGTAATGTCA	NA	False	NA	-15	True	AATAAA	-25	NA	32592783	32696663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_32592936_32602747_32602905_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
m54284U_201203_174622/88803101/ccs	chr15	+	5323	19	NIC	ENSMUSG00000022463.9	novel	740	6	NA	NA	371	0	intron_retention	FALSE	canonical	3	9	junction_1	166.011787473802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGCTGTGTGAGTCTG	2614	False	NA	25	True	AATAAA	-21	NA	82031822	82089580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_82032379_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
m54284U_201203_174622/88868475/ccs	chr1	+	5581	29	NIC	ENSMUSG00000070738.11	novel	5695	30	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_21	67.4020358652134	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCATTCCTGTCCTCAT	4070	False	NA	20	True	AATAAA	-24	NA	87781008	87872212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
m54284U_201203_174622/88868519/ccs	chr1	-	6738	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_39	283.264271485127	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7695	False	NA	17	True	NA	NA	NA	84817224	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772046_84792543_84792691_84816949
m54284U_201203_174622/88868849/ccs	chr7	-	5659	36	ISM	ENSMUSG00000030739.19	ENSMUST00000107899.10	6390	40	9863	0	-3070	0	3prime_fragment	FALSE	canonical	2	5	junction_31	24.1144211235196	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTGCGTTTCTAATT	1937	False	NA	-1	True	AATAAA	-17	NA	44305062	44255226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_-_44255788_44256054_44256228_44257858_44257968_44260946_44261156_44262858_44262983_44263065_44263155_44263716_44263846_44264768_44264931_44265523_44265737_44271161_44271375_44272399_44272649_44273501_44273655_44273743_44273849_44274389_44274597_44274787_44274933_44276435_44276649_44277891_44278064_44278188_44278313_44278683_44278822_44279280_44279488_44280137_44280270_44280974_44281084_44281806_44281968_44282358_44282429_44282898_44283021_44283782_44283971_44287188_44287304_44287713_44287888_44288366_44288541_44288659_44288813_44290484_44290604_44292887_44292984_44301854_44301996_44303379_44303479_44304645_44304710_44305015
m54284U_201203_174622/88869367/ccs	chr15	-	2204	13	NNC	ENSMUSG00000022442.17	novel	2060	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_12	26.455413224686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTTTATCTTATTATT	NA	False	NA	NA	False	NA	NA	NA	83395094	83367969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83393853_83393998_83394934
m54284U_201203_174622/88933549/ccs	chr3	+	3632	16	NIC	ENSMUSG00000068823.11	novel	4318	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	5407.04711772825	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	NA	False	NA	22	True	AATAAA	-25	NA	102927927	102965502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_102927986_102936104_102936529_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
m54284U_201203_174622/88998031/ccs	chr17	-	1986	12	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	-329	0	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_9	206.573981704752	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGATGACCTTAAACATCA	NA	False	NA	-19	True	AATAAA	-16	NA	15181864	15165270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15179680_15179788_15181372
m54284U_201203_174622/89063786/ccs	chr6	-	4281	1	Intergenic	novelGene_3241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCATGTTGGTCTGCTA	NA	False	NA	-6	True	ATTAAA	-13	NA	47167375	47163094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47163100_47167400
m54284U_201203_174622/89064043/ccs	chr11	+	1427	7	NIC	ENSMUSG00000025371.13	novel	1557	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	121.939420296401	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGTTTAGTGTCTTGGT	NA	False	NA	18	True	ATTAAA	-33	NA	119804655	119810374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_119804764_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
m54284U_201203_174622/89064189/ccs	chr5	-	225	1	Intergenic	novelGene_2672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCAGTCTCAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	92446457	92446232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92446200_92446500
m54284U_201203_174622/89064599/ccs	chr11	+	4134	15	NIC	ENSMUSG00000037791.16	novel	4410	15	NA	NA	0	-472	intron_retention	FALSE	canonical	3	11	junction_9	32.5263629339999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATACAATATCATTGTTT	NA	False	NA	23	True	ATTAAA	-31	NA	77873579	77920893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915638_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
m54284U_201203_174622/89064897/ccs	chr11	-	173	1	Intergenic	novelGene_5695	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAAAAAAGCATTC	NA	False	NA	NA	False	NA	NA	NA	6579323	6579150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_6579200_6579300
m54284U_201203_174622/89129628/ccs	chr3	+	1660	15	NIC	ENSMUSG00000027787.15	novel	9135	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	45	junction_3	244.19793744637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTGTTGTGAAGGTTT	NA	False	NA	11	True	AATAAA	-21	NA	69629364	69656375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_69629456_69629741_69629800_69631589_69631725_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
m54284U_201203_174622/89131693/ccs	chr1	+	3604	9	NIC	ENSMUSG00000026305.16	novel	2050	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.5951045123867	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCCTACTGGTTGTTCTG	NA	False	NA	4	True	AATAAA	-18	NA	90926458	91045037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91042317
m54284U_201203_174622/8914448/ccs	chr1	-	4596	21	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_19	43.3662022778108	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408262	36374810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404667_36406849_36407116_36408185
m54284U_201203_174622/8914887/ccs	chr17	+	2803	6	NNC	ENSMUSG00000023902.19	novel	2609	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	8	junction_1	100.210578283932	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGATTTTTTTACTTTT	879	False	NA	35	True	AGTAAA	-19	NA	23819829	23829993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_23819934_23824380_23824939_23826097_23826363_23826553_23826619_23827081_23827140_23828240
m54284U_201203_174622/89195575/ccs	chr14	+	4605	9	NIC	ENSMUSG00000021932.14	novel	1494	11	NA	NA	0	-481	intron_retention	FALSE	canonical	3	753	junction_1	49.7160688309122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTGCCTATTCTG	NA	False	NA	15	True	AATAAA	-24	NA	62569573	62609960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_62569626_62584016_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
m54284U_201203_174622/89261215/ccs	chr16	+	6691	12	NIC	ENSMUSG00000022807.10	novel	4521	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	140	junction_5	9.17596573159676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGGCGTCTCTTTCATA	NA	False	NA	5	True	AATAAA	-15	NA	33005440	33063682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
m54284U_201203_174622/89262797/ccs	chr9	-	5450	29	NNC	ENSMUSG00000035941.16	novel	5650	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_19	38.9746614442496	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTAAAATGTGT	NA	False	NA	-25	True	ATTAAA	-3	NA	85631387	85569609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600511_85600947_85600986_85601065_85601149_85601915_85602003_85602796_85603400_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
m54284U_201203_174622/89327371/ccs	chr8	+	3753	22	NIC	ENSMUSG00000031731.17	novel	3692	23	NA	NA	87	0	intron_retention	FALSE	canonical	1	4	junction_1	45.8165522773706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTCCCACATTGTACTTT	NA	False	NA	NA	False	AATAAA	-20	NA	110505272	110587990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_110505595_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
m54284U_201203_174622/89328112/ccs	chr12	+	2739	6	NIC	ENSMUSG00000021203.16	novel	424	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	32.5047688808888	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAGTCTGGCTTCTTAA	8463	False	NA	NA	False	ATTAAA	-16	NA	103355243	103372604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_103355368_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
m54284U_201203_174622/89392052/ccs	chr16	+	1322	10	NNC	ENSMUSG00000053062.17	novel	4370	10	NA	NA	-115	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_2	1238.8758345102	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATGTCTGGTAATATT	NA	False	NA	32	True	ACTAAA	-32	NA	84571158	84619918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_84571442_84598457_84598527_84603724_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
m54284U_201203_174622/89393002/ccs	chr18	+	6172	20	NIC	ENSMUSG00000024302.17	novel	3860	25	NA	NA	681	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	3.4472679776448	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTAGTGGGGTTTGTT	NA	False	NA	17	True	ATTAAA	-20	NA	23630572	23792772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_23630761_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23788869
m54284U_201203_174622/89459155/ccs	chr19	-	1349	10	NIC	ENSMUSG00000024799.17	novel	1471	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	76.3254888416287	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTTTTCTTCTATCC	9953	False	NA	0	True	AATAAA	-15	NA	6117880	6112850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116594_6116997_6117053_6117152_6117350_6117698
m54284U_201203_174622/89524510/ccs	chr19	-	2861	3	ISM	ENSMUSG00000092274.4	ENSMUST00000174829.2	1030	4	-217	-1374	0	0	intron_retention	FALSE	canonical	3	5	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTTAGAATTGTCATGG	10003	False	NA	-12	True	AATAAA	-15	NA	5895504	5892334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_-_5894463_5894605_5894787_5894952
m54284U_201203_174622/89588179/ccs	chr19	+	2095	9	NNC	ENSMUSG00000024921.18	novel	876	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	7.69740215917033	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCTTTTCTTTTA	NA	False	NA	63	True	AATAAA	-18	NA	26693283	26755721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_26693393_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
m54284U_201203_174622/89588703/ccs	chr9	+	2840	15	NNC	ENSMUSG00000032411.16	novel	1713	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_3	119.483326477473	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAATATTCAGTGTTTT	NA	False	NA	4	True	NA	NA	NA	96078356	96201034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_96078614_96084183_96084242_96093185_96093270_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
m54284U_201203_174622/89655331/ccs	chr16	+	5202	1	Intergenic	novelGene_8170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	25336706	25341908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_25336700_25341900
m54284U_201203_174622/89655759/ccs	chr3	-	3434	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	277.248166726781	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201203_174622/89719264/ccs	chr1	-	5235	15	NNC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	-266	488	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_12	57.4648073313802	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCTTCTCAAGACATT	NA	False	NA	44	True	AGTAAA	-13	NA	30913268	30842138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30876185_30876348_30902067_30902337_30913160
m54284U_201203_174622/89785882/ccs	chrX	-	1521	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	205	junction_9	464.760242108367	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830380
m54284U_201203_174622/89785975/ccs	chr8	+	1704	13	NIC	ENSMUSG00000079033.11	novel	1337	9	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_5	72.9206189405073	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAATCTCCTCAAAGATCT	8827	False	NA	5	True	NA	NA	NA	70592362	70620138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70616878_70616955_70617697_70617902_70618179_70618315_70618695_70618826_70618942_70619077_70619263_70619349_70619468_70619557_70619715
m54284U_201203_174622/8979970/ccs	chr10	-	187	1	Intergenic	novelGene_5500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATAAGTCTATGGGGGAC	NA	False	NA	NA	False	NA	NA	NA	90969483	90969296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_90969300_90969500
m54284U_201203_174622/89851113/ccs	chr10	+	874	6	NIC	ENSMUSG00000025381.4	novel	1383	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	1028.12695714099	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACTGTGTTGTCTTTTTT	NA	False	NA	33	True	AATGAA	-29	NA	128158413	128163056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128158588_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
m54284U_201203_174622/89852573/ccs	chr10	+	3402	23	NIC	ENSMUSG00000019823.18	novel	3563	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	52.4446973581861	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTATGCTCTGTGCT	9115	False	NA	29	True	AATAAA	-18	NA	41352331	41363026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_41352537_41354005_41354311_41354958_41355064_41355321_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
m54284U_201203_174622/89917802/ccs	chr1	+	4936	18	NIC	ENSMUSG00000055013.17	novel	10065	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	103.172680861382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCCATGTTAATTTAT	NA	False	NA	39	True	AATAAA	-40	NA	89507957	89817723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
m54284U_201203_174622/89918161/ccs	chr17	+	3207	6	NNC	ENSMUSG00000061130.14	novel	3323	6	NA	NA	0	-72	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_2	589.085596496808	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTGACATATTACTCTT	NA	False	NA	27	True	AATAAA	-16	NA	85265426	85324553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_85265823_85301107_85301968_85310747_85310812_85312339_85312452_85312936_85312995_85322836
m54284U_201203_174622/89983662/ccs	chr10	-	2505	9	NNC	ENSMUSG00000020078.17	novel	2597	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	185	junction_2	286.724933516428	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTTAAGTTTGTAGTT	5257	False	NA	-11	True	AATAAA	-12	NA	62322525	62291055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_62292638_62294702_62294813_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
m54284U_201203_174622/89983709/ccs	chr15	+	2596	2	NNC	ENSMUSG00000022623.18	novel	7365	22	NA	NA	259	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTCTCAGTTTGTGCTT	NA	False	NA	NA	False	NA	NA	NA	89441163	89444464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_89441233_89441937
m54284U_201203_174622/90047264/ccs	chr13	-	2101	1	ISM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	5336	4583	5090	2922	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTTTTGTTTTCTGCA	NA	False	NA	NA	False	AATAGA	-17	NA	18162598	18160497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_18160500_18162600
m54284U_201203_174622/90047487/ccs	chr8	+	358	1	Intergenic	novelGene_4259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	223	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCACTTACGTTCTAGG	NA	False	NA	NA	False	NA	NA	NA	34035589	34035947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_34035600_34035900
m54284U_201203_174622/90112045/ccs	chr17	-	5590	41	NIC	ENSMUSG00000002496.11	novel	6266	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_15	55.0992229981512	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851601	24815462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823964_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
m54284U_201203_174622/90112086/ccs	chr1	+	4596	25	NNC	ENSMUSG00000056211.14	novel	4795	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	69.803444279873	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCACTTTGTCTTTTTTC	NA	False	NA	19	True	AATAAA	-15	NA	128031067	128165473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_128031221_128079480_128079690_128080925_128081137_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109902_128112136_128112392_128114494_128114647_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
m54284U_201203_174622/90113021/ccs	chr3	+	5539	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_16	44.0248509367153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989326	88028355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
m54284U_201203_174622/90180130/ccs	chr8	+	775	5	NIC	ENSMUSG00000036977.9	novel	2801	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	195	junction_1	137.767920794356	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAATTTGAAGTCAAT	NA	False	NA	2	True	AATAAA	-20	NA	80438448	80501971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_80438474_80439781_80439909_80446286_80446378_80455758_80455880_80501560
m54284U_201203_174622/90243698/ccs	chr6	+	1674	5	NNC	ENSMUSG00000058446.15	novel	5886	5	NA	NA	7346	-3766	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	273.671792481432	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTAATGGTTAAGAATAC	NA	False	NA	14	True	AATAAA	-16	NA	54801778	54866719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_54801890_54840884_54840981_54855333_54855440_54861749_54861832_54865440
m54284U_201203_174622/90245029/ccs	chr8	+	4287	4	NIC	ENSMUSG00000031924.5	novel	4316	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	656.441078002351	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGGTTGCTTTTTTTTTT	NA	False	NA	17	True	AATAAA	-28	NA	107877271	107914103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_107877506_107896442_107896572_107897022_107897053_107910209
m54284U_201203_174622/90308613/ccs	chr17	+	3936	26	NIC	ENSMUSG00000024392.18	novel	3858	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	434	junction_1	113.385261828864	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAGTACCTTTTCTTTA	8515	False	NA	32	True	AATAAA	-33	NA	35354180	35366298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35354448_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361702_35361816_35361901_35361987_35362308_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
m54284U_201203_174622/90308993/ccs	chr1	-	1873	10	NNC	ENSMUSG00000003051.14	novel	1901	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	201.593528212797	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTGAGCTCTCTGT	NA	False	NA	-10	True	AATAAA	-23	NA	135186176	135181316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_135181885_135181972_135182119_135182662_135182859_135183712_135183830_135183971_135184062_135184208_135184329_135184516_135184613_135184742_135185025_135185352_135185521_135186086
m54284U_201203_174622/90374278/ccs	chr14	+	3899	7	NNC	ENSMUSG00000041445.10	novel	3974	7	NA	NA	3064	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.0969870599771	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTGTTTACTGTTG	8210	False	NA	6	True	AATAAA	-16	NA	34100741	34126244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_34100981_34118121_34118251_34118328_34118436_34118515_34118597_34119503_34119678_34119786_34121581_34124869
m54284U_201203_174622/90374473/ccs	chr3	+	4366	10	NIC	ENSMUSG00000008604.12	novel	3330	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1295	junction_7	121.63312576741	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6105	False	NA	NA	False	AATAAA	-26	NA	88461064	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
m54284U_201203_174622/90440515/ccs	chr17	-	5533	41	NIC	ENSMUSG00000002496.11	novel	5598	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_11	57.1288018428533	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGTCAGACAGCTT	NA	False	NA	-11	True	AATAAA	-43	NA	24851601	24815462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
m54284U_201203_174622/9044701/ccs	chr14	+	1009	8	NIC	ENSMUSG00000053453.10	novel	707	6	NA	NA	126	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	230.414976128918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTTGTGCTCATTCAAA	NA	False	NA	20	True	AATAAA	-14	NA	8508728	8520749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_8508896_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
m54284U_201203_174622/9046068/ccs	chr2	+	3858	16	NIC	ENSMUSG00000045106.13	novel	3944	18	NA	NA	0	137	combination_of_known_splicesites	FALSE	canonical	2	3	junction_6	14.3814695586601	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGCTGAATATTCTTTCA	NA	False	NA	12	True	ACTAAA	-29	NA	104716668	104830219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_104716839_104737885_104738044_104745002_104745075_104757248_104757321_104759867_104759904_104761319_104761395_104781851_104781988_104782213_104782294_104803511_104803641_104804202_104804263_104805900_104806006_104811334_104811446_104815318_104815454_104821424_104822898_104824813_104824948_104829307
m54284U_201203_174622/9046439/ccs	chr9	+	5551	21	NIC	ENSMUSG00000032293.9	novel	5770	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	64.8093164599041	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTCGTTGTGTTTTAT	2626	False	NA	14	True	AATAAA	-19	NA	54771072	54819814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
m54284U_201203_174622/90505727/ccs	chr9	-	2889	10	NNC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	83	junction_1	123.069989120915	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTCTGTAATTTTG	2204	False	NA	-13	True	NA	NA	NA	58157016	58125824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_58126012_58126793_58126953_58127105_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58140435_58140531_58141635_58142217_58154257_58154722_58156823
m54284U_201203_174622/90507638/ccs	chr1	-	455	4	NNC	ENSMUSG00000079658.10	novel	2014	4	NA	NA	0	-53	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_3	1156.21518566206	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGTAGTTCAGTTAGTA	NA	False	NA	-1	True	AATAAA	-40	NA	16727108	16713467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_16713703_16715909_16716054_16718178_16718232_16727085
m54284U_201203_174622/90572336/ccs	chr10	-	190	1	Intergenic	novelGene_5359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTCTCCAAGGACATCA	NA	False	NA	NA	False	NA	NA	NA	62818886	62818696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62818700_62818900
m54284U_201203_174622/90572916/ccs	chr16	+	6295	3	NNC	ENSMUSG00000050240.17	novel	6354	3	NA	NA	19470	0	intron_retention	FALSE	canonical	3	13	junction_1	33.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGTCTGTGACTATAC	654	False	NA	17	True	ATTAAA	-19	NA	17070997	17081294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_17071098_17072831_17072931_17075198
m54284U_201203_174622/90637389/ccs	chr17	-	2482	14	NIC	ENSMUSG00000024137.10	novel	2574	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	31.9209452485688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTTTGTTGTGATTGGG	NA	False	NA	-4	True	AATAAA	-13	NA	24674289	24662755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665816_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
m54284U_201203_174622/90637828/ccs	chr10	-	5497	18	NIC	ENSMUSG00000020167.15	novel	2950	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	747	junction_4	164.312639801739	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCCAGTGTTGATCT	NA	False	NA	-33	True	ATTAAA	-10	NA	80269481	80245380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80246109_80246231_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
m54284U_201203_174622/90702144/ccs	chr1	+	3082	24	NIC	ENSMUSG00000026229.18	novel	3112	25	NA	NA	0	136	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	326.678402757172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGACCAGACTTTAGTTG	NA	False	NA	17	True	AATAAA	-17	NA	85992362	86067009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
m54284U_201203_174622/90704421/ccs	chr15	+	1362	1	Intergenic	novelGene_7667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTTTAGCCCCATGCA	NA	False	NA	NA	False	NA	NA	NA	31531306	31532668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_31531300_31532700
m54284U_201203_174622/90768034/ccs	chr4	+	2498	8	NIC	ENSMUSG00000061455.14	novel	5770	8	NA	NA	0	885	intron_retention	FALSE	canonical	2	7	junction_1	13.490737563232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTATTTATTTCTTA	-6	True	NA	15	True	ATTAAA	-12	NA	48124914	48183116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_48125067_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
m54284U_201203_174622/90768680/ccs	chr3	-	4315	29	NNC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_28	321.423785678658	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3547	False	NA	-9	True	AATAAA	-21	NA	89959782	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89956126_89956203_89959696
m54284U_201203_174622/90769706/ccs	chr4	+	6020	6	NIC	ENSMUSG00000054405.15	novel	1837	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	2684	junction_5	217.073628062001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2348	False	NA	19	True	AATAAA	-19	NA	132262877	132281053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_132262975_132265497_132265600_132269092_132274020_132277687_132277780_132278845_132278922_132280327
m54284U_201203_174622/90834222/ccs	chr6	-	1332	5	NIC	ENSMUSG00000055850.13	novel	1434	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_4	391.378652969219	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8475	False	NA	NA	False	TATAAA	-15	NA	72339348	72336696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339258
m54284U_201203_174622/90899029/ccs	chr4	-	217	1	Intergenic	novelGene_2220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTCACAGCAAGAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133382832	133382615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_133382600_133382800
m54284U_201203_174622/90899369/ccs	chr7	-	3482	8	NIC	ENSMUSG00000042492.13	novel	3614	9	NA	NA	53	-338	intron_retention	FALSE	canonical	3	338	junction_3	36.3531431984658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCGCCTTGTTATTTGAA	1595	False	NA	-1	True	AATGAA	-18	NA	126807587	126796968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126803013_126806621
m54284U_201203_174622/90964325/ccs	chr7	-	3313	19	NIC	ENSMUSG00000030766.16	novel	3336	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	53.6950982888281	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTAATTCTTAGAGGCA	NA	False	NA	-1	True	ATTAAA	-25	NA	122969126	122878493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122968976
m54284U_201203_174622/90964874/ccs	chr7	+	2895	18	NIC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	136	junction_1	220.255859396784	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_3648595_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201203_174622/90965260/ccs	chr2	-	2210	11	NNC	ENSMUSG00000027466.16	novel	2384	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_5	180.796460142338	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGGTGTCATGCTTGA	NA	False	NA	-12	True	ATTAAA	-16	NA	152174332	152158253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164179_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
m54284U_201203_174622/90965864/ccs	chr11	-	3254	15	NNC	ENSMUSG00000020368.16	novel	3779	15	NA	NA	0	-486	at_least_one_novel_splicesite	FALSE	canonical	3	77	junction_2	1408.3211238049	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTGGCTTGTA	8136	False	NA	-2	True	AATAAA	-23	NA	50216500	50185779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_50187163_50187884_50187962_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216355
m54284U_201203_174622/91096024/ccs	chr9	+	3196	11	NNC	ENSMUSG00000109032.2	novel	1137	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	14.3753260832581	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75375897	75393963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_75375966_75377587_75377649_75379458_75379554_75380085_75380262_75380603_75380689_75383697_75383793_75385260_75385396_75386953_75387087_75388729_75388947_75390380_75390480_75391931
m54284U_201203_174622/91096243/ccs	chr17	+	4532	17	NNC	ENSMUSG00000064043.16	novel	3503	12	NA	NA	-16047	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_5	13.4483967445938	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCTCATCTGGGCTA	2046	False	NA	20	True	AATAAA	-25	NA	47507265	47670388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_47507415_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628696_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
m54284U_201203_174622/91096788/ccs	chr9	-	3116	1	Intergenic	novelGene_4698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATAAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	32047580	32044464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_32044500_32047600
m54284U_201203_174622/9110000/ccs	chr16	+	3663	37	NNC	ENSMUSG00000033653.19	novel	4952	44	NA	NA	0	12451	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_35	35.0999784566077	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAGGGACAAGAGCTGC	NA	False	NA	NA	False	NA	NA	NA	21241918	21364366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21363920_21364024_21364116
m54284U_201203_174622/9110606/ccs	chr5	-	4063	10	NIC	ENSMUSG00000029405.17	novel	4182	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	551.697380816694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	False	NA	-18	True	AATAAA	-15	NA	92231578	92200022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_92202913_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
m54284U_201203_174622/91160644/ccs	chr8	-	3287	7	NNC	ENSMUSG00000031482.10	novel	3430	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	87.5893194909567	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCTCTGGTCGTAGTGT	NA	False	NA	-6	True	NA	NA	NA	22888613	22865566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879972_22880089_22885728_22885844_22888455
m54284U_201203_174622/91160864/ccs	chr7	-	2914	11	NIC	ENSMUSG00000030726.17	novel	3069	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_10	178.454924280615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGCGAGTTGGAGT	NA	False	NA	-4	True	AATAAA	-18	NA	99770673	99731317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99770570
m54284U_201203_174622/91161354/ccs	chr7	+	2231	8	NIC	ENSMUSG00000045411.17	novel	988	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	337.565594532744	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGCTGTTTGATTCGG	NA	False	NA	24	True	ATTAAA	-24	NA	43896210	43901743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_43896233_43896661_43896841_43897333_43897484_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
m54284U_201203_174622/91226970/ccs	chr10	+	1352	10	NIC	ENSMUSG00000044475.15	novel	1450	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	69.3265666213622	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTGTGGTCTGTGCA	NA	False	NA	26	True	AATAAA	-16	NA	59838660	59935808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_59838730_59840616_59840750_59843548_59843649_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
m54284U_201203_174622/91292137/ccs	chr2	-	3991	19	NIC	ENSMUSG00000027184.15	novel	6169	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	493.53252985461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTCATGTGTGGTTAT	NA	False	NA	-11	True	AATAAA	-17	NA	103627944	103595362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604090_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
m54284U_201203_174622/91293546/ccs	chr11	+	2711	11	NIC	ENSMUSG00000018583.6	novel	6703	12	NA	NA	0	-4475	intron_retention	FALSE	canonical	3	6361	junction_7	609.415096629547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAAATTCCCACAAG	NA	False	NA	NA	False	NA	NA	NA	55360543	55391189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55389494_55390284
m54284U_201203_174622/91293717/ccs	chr12	+	2474	16	Fusion	ENSMUSG00000112368.2_ENSMUSG00000079108.7	novel	3642	16	NA	NA	274	614	multi-exon	FALSE	canonical	3	11	junction_15	308.573376831004	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCACTGTGGATTTCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	55277226	55326113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55325297
m54284U_201203_174622/91294068/ccs	chr9	+	1539	8	NNC	ENSMUSG00000032397.8	novel	1211	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	848.77756034121	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTCAGGATTTGAGTTT	9569	False	NA	14	True	AATAAA	-14	NA	64188888	64212074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_64189269_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
m54284U_201203_174622/91358311/ccs	chr16	-	2654	13	NIC	ENSMUSG00000003526.13	novel	2386	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_5	12.5063872570068	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTTTCTCTTGGTACC	8072	False	NA	-1	True	AATAAA	-19	NA	17907027	17889589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898940_17899394_17899430_17902410_17902620_17906751
m54284U_201203_174622/91358640/ccs	chr3	+	5460	7	NIC	ENSMUSG00000000561.15	novel	3682	10	NA	NA	-5	673	intron_retention	FALSE	canonical	3	940	junction_3	45.8609008003792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTGTTACTTATTACC	NA	False	NA	23	True	AATAAA	-27	NA	105866818	105875516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105871829_105871938_105871994_105872396_105873742_105874478
m54284U_201203_174622/91359017/ccs	chr18	-	4514	25	NNC	ENSMUSG00000024613.17	novel	4529	25	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	183	junction_2	270.111345353891	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCTTCCCCATGCAT	NA	False	NA	-18	True	AATAAA	-17	NA	60982031	60946826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_60947261_60947594_60947638_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
m54284U_201203_174622/91359819/ccs	chr11	+	1949	11	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	82	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	63.1901891119183	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCATCTGTTGGAGA	7491	False	NA	14	True	AATAAA	-16	NA	102284310	102293381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102284609_102288396_102288513_102288925_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
m54284U_201203_174622/91425150/ccs	chr5	-	4381	19	NIC	ENSMUSG00000029467.16	novel	4486	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_16	289.464064167635	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAGAGAAAAATAACTGTC	7277	False	NA	-28	True	AATAAA	-13	NA	122640288	122594402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122638793_122638877_122638993_122639012_122639630
m54284U_201203_174622/91488312/ccs	chr10	-	3041	11	NNC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_1	114.041264461597	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047454	127032935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_127034618_127034913_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
m54284U_201203_174622/91488399/ccs	chr4	+	3926	29	NNC	ENSMUSG00000036622.16	novel	3956	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	25.3341696738067	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGGCACTGGTCTTGT	1429	False	NA	12	True	AATAAA	-17	NA	140714210	140734641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721625_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
m54284U_201203_174622/91488567/ccs	chr5	+	5296	20	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_9	22.0603553864935	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1443	False	NA	16	True	AATACA	-15	NA	34527276	34643800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
m54284U_201203_174622/91488851/ccs	chr2	+	10965	27	NIC	ENSMUSG00000043535.14	novel	10970	26	NA	NA	170	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_23	77.2148696474621	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGGTTAGAAGTACTCC	NA	False	NA	NA	False	AATAAA	-18	NA	29015173	29072483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29064330_29064496_29066888_29066988_29067526_29067615_29069411
m54284U_201203_174622/91685222/ccs	chr11	-	2817	9	NNC	ENSMUSG00000038351.15	novel	4873	24	NA	NA	2629	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_8	18.6681547025945	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGGCTCTGATGGCT	7955	False	NA	-8	True	AATAAA	-14	NA	74748772	74740091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748732
m54284U_201203_174622/91685806/ccs	chrX	-	2352	7	NIC	ENSMUSG00000031352.11	novel	2473	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_6	191.804950115707	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTAGAGTGATTTTTGT	NA	False	NA	0	True	AATAAA	-25	NA	168103368	168094525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103170
m54284U_201203_174622/91686049/ccs	chr2	-	3931	14	ISM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	-29	11988	0	867	5prime_fragment	FALSE	canonical	3	11	junction_13	9.62676249904493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATGTTAAGTGTCCTT	NA	False	NA	NA	False	NA	NA	NA	120680916	120575284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
m54284U_201203_174622/91686790/ccs	chr5	+	176	1	Intergenic	novelGene_2776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAATCTCAGA	NA	False	NA	NA	False	NA	NA	NA	113288801	113288977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_113288800_113289000
m54284U_201203_174622/9175495/ccs	chr12	+	2372	5	NNC	ENSMUSG00000020592.15	novel	3157	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_2	95.4437006826538	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCTATGAACTCTACTG	NA	False	NA	5	True	AATAAA	-14	NA	8821322	8843062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_8821702_8839406_8839489_8840516_8840867_8841290_8841427_8841637
m54284U_201203_174622/91816269/ccs	chr1	+	4313	18	NIC	ENSMUSG00000026510.11	novel	4361	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_11	27.8886813369296	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCCTGGTTTTCCTT	NA	False	NA	8	True	AATAAA	-21	NA	182236736	182289997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273886_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
m54284U_201203_174622/91816738/ccs	chr12	+	7109	7	NNC	ENSMUSG00000035133.10	novel	2332	6	NA	NA	-64	824	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	122.471311833516	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACACTGACTTGTGTTTGT	NA	False	NA	14	True	ATTAAA	-23	NA	52551060	52616442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_52551171_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
m54284U_201203_174622/91818221/ccs	chr14	-	3786	14	NIC	ENSMUSG00000039308.7	novel	3907	15	NA	NA	221	0	intron_retention	FALSE	canonical	3	47	junction_9	9.4530919145834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	9644	False	NA	-1	True	AATAAA	-15	NA	20784409	20773797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
m54284U_201203_174622/918256/ccs	chr16	-	955	4	NNC	ENSMUSG00000022706.17	novel	1280	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	55	junction_2	792.32190427881	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCGTTTATTTTAATC	NA	False	NA	-7	True	AATAAA	-15	NA	18695289	18690767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_18691413_18692286_18692444_18694073_18694158_18695220
m54284U_201203_174622/918491/ccs	chr2	+	4371	33	NIC	ENSMUSG00000036833.17	novel	4574	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	9.26266025502393	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCTATTTTACTCTG	NA	False	NA	10	True	AATAAA	-13	NA	24866084	24944069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_24866326_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
m54284U_201203_174622/91882149/ccs	chr8	-	7705	49	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	306	junction_10	315.46632081091	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459698_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
m54284U_201203_174622/919161/ccs	chr2	-	2499	11	NIC	ENSMUSG00000038312.11	novel	2290	11	NA	NA	65	-352	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	96.8371829412649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTTTTACATGCTGG	NA	False	NA	-13	True	AATAAA	-13	NA	155571330	155543948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155554631_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
m54284U_201203_174622/91948320/ccs	chr19	+	3341	3	NNC	ENSMUSG00000044026.4	novel	3474	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	189.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTGTCTCACGACTCGT	NA	False	NA	35	True	AATAAA	-36	NA	38384488	38394058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_38384750_38388953_38389063_38391087
m54284U_201203_174622/92013278/ccs	chr1	-	2072	12	NNC	ENSMUSG00000026277.15	novel	4249	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_7	50.5737330967256	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGTACAGAGCCTGGC	NA	False	NA	-36	True	AATAAA	-19	NA	93563444	93549623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553905_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
m54284U_201203_174622/92014938/ccs	chr9	+	5507	35	NIC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_26	174.595241257877	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1332	False	NA	22	True	AATAAA	-19	NA	21527559	21614662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589248_21589348_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
m54284U_201203_174622/92015344/ccs	chr4	+	1574	9	NNC	ENSMUSG00000028914.14	novel	3897	9	NA	NA	0	2315	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_8	77.1342174394736	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCAAGGCCTTTTAT	NA	False	NA	NA	False	ATTAAA	-4	NA	141521020	141545602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_141521298_141523748_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141545442
m54284U_201203_174622/920395/ccs	chr17	-	176	1	Intergenic	novelGene_8368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	13149484	13149308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_13149300_13149500
m54284U_201203_174622/920406/ccs	chr11	+	4506	23	NNC	ENSMUSG00000020128.16	novel	4323	23	NA	NA	-380	0	at_least_one_novel_splicesite	TRUE	canonical	2	17	junction_2	73.6392816481319	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCAATGGTACAGTA	NA	False	NA	33	True	AATAAA	-29	NA	21188900	21271136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_21189372_21213198_21213355_21214826_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
m54284U_201203_174622/92210361/ccs	chr7	-	3488	7	NIC	ENSMUSG00000030722.8	novel	3388	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	215	junction_6	20.4260182664714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCTGGTTTCTGTCTTT	NA	False	NA	-6	True	AATAAA	-20	NA	125995909	125982025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_125984312_125986573_125986929_125989557_125989745_125989834_125989916_125990442_125990567_125995113_125995187_125995527
m54284U_201203_174622/92212025/ccs	chr9	+	4652	27	NIC	ENSMUSG00000006676.17	novel	4520	27	NA	NA	-113	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_5	71.9086061131496	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTATGGCTCCCTCCCC	NA	False	NA	31	True	AATAAA	-35	NA	108367925	108379536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370762_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
m54284U_201203_174622/92276161/ccs	chr10	+	8360	26	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	38.2079363483557	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGATGTTACAGTTCT	NA	False	NA	13	True	ATTAAA	-14	NA	66932270	67092097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053895_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
m54284U_201203_174622/92276370/ccs	chr3	+	6082	37	NIC	ENSMUSG00000028068.15	novel	5756	38	NA	NA	0	0	intron_retention	FALSE	canonical	3	183	junction_11	24.306238085655	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGCGTTGTTGCTATAG	NA	False	NA	19	True	AATAAA	-20	NA	87989326	88028355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88025092_88027469
m54284U_201203_174622/92341380/ccs	chr2	-	7585	35	NNC	ENSMUSG00000026987.17	novel	7895	35	NA	NA	39377	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_31	41.0280623855695	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTTTTTTTTTAGGGG	1547	False	NA	-4	True	AATAAA	-19	NA	59881037	59729706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737887_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125_59814315_59831849_59831901_59836386_59836534_59880905
m54284U_201203_174622/92342596/ccs	chr14	+	831	1	FSM	ENSMUSG00000045799.7	ENSMUST00000052615.7	336	1	210	-705	210	705	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTACAGTGTTTGTG	NA	False	NA	NA	False	AATAAA	-45	NA	13669647	13670478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_13669600_13670500
m54284U_201203_174622/92405935/ccs	chr10	-	1655	5	NIC	ENSMUSG00000004359.17	novel	646	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	186.499329757509	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	NA	False	NA	NA	NA	88520877	88510633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_88511933_88514385_88514499_88515720_88515818_88516340_88516437_88520827
m54284U_201203_174622/9241078/ccs	chr9	-	3330	11	NNC	ENSMUSG00000058587.10	novel	3667	10	NA	NA	0	-409	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	197.305980649346	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGACTGTTGGTCATT	NA	False	NA	0	True	AATAAA	-19	NA	75466939	75405397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_75407433_75409704_75409777_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
m54284U_201203_174622/9241815/ccs	chr15	+	1963	13	NNC	ENSMUSG00000068206.14	novel	1977	13	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_12	63.2966999315306	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGGCTCCTTGCAATG	4392	False	NA	18	True	AATAAA	-18	NA	79113590	79133666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132925
m54284U_201203_174622/92472274/ccs	chr16	+	171	1	Intergenic	novelGene_8112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTTTTAAAAAATCTAC	2002	False	NA	NA	False	NA	NA	NA	17765903	17766074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17765900_17766100
m54284U_201203_174622/92473281/ccs	chr2	+	2201	13	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_8	932.387511833048	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
m54284U_201203_174622/92473876/ccs	chr6	-	574	4	NNC	ENSMUSG00000012483.5	novel	670	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	677.807412831174	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCAATTGTTTT	-15	True	NA	-11	True	AATAAA	-14	NA	8259140	8255935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_8256185_8256694_8256804_8257686_8257762_8258999
m54284U_201203_174622/92539696/ccs	chr2	-	2321	8	NIC	ENSMUSG00000068290.12	novel	1238	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_6	137.869355491616	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTTGTTGTTTGTAGA	NA	False	NA	-4	True	ATTAAA	-16	NA	130506579	130495954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130505475_130506394
m54284U_201203_174622/92603240/ccs	chr11	+	5302	17	NNC	ENSMUSG00000059474.14	novel	5232	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	39.4792271327593	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCAATTTTTCAACAT	NA	False	NA	19	True	AATAAA	-20	NA	93777032	93837811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799770_93801108_93801233_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
m54284U_201203_174622/92736324/ccs	chr13	-	4806	25	NIC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_14	77.4584902275621	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGACTTTGTGCCTTTGTG	NA	False	NA	-4	True	AATAAA	-22	NA	98951716	98859910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891762_98892073_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98942813_98942906_98951583
m54284U_201203_174622/92799355/ccs	chr7	-	164	1	Intergenic	novelGene_3837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAAATAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	45062487	45062323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_45062300_45062500
m54284U_201203_174622/92931526/ccs	chrX	+	3243	14	NIC	ENSMUSG00000031337.17	novel	3379	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	91.7350184469783	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCAGGGCTATGACTGT	NA	False	NA	16	True	AATAAA	-24	NA	70258636	70358901	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
m54284U_201203_174622/92995623/ccs	chr2	+	2832	15	NIC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-70	983	combination_of_known_junctions	FALSE	canonical	3	23	junction_10	1072.06622929743	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896536	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162917838_162917956_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201203_174622/93061282/ccs	chr17	-	2223	7	NNC	ENSMUSG00000062012.15	novel	2104	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	37.0929762743419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGGCTCTGTGTGCTTG	4823	False	NA	0	True	ATTAAA	-21	NA	23805206	23794817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23803793_23803913_23804411_23804549_23804934
m54284U_201203_174622/93062955/ccs	chr4	+	2748	14	NNC	ENSMUSG00000066148.4	novel	5223	14	NA	NA	0	1145	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_7	81.1881444109878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGGAAAAAATCCTAATT	NA	False	NA	32	True	ATTAAA	-20	NA	62327033	62342713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334849_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
m54284U_201203_174622/9306796/ccs	chr11	+	5816	24	NNC	ENSMUSG00000049807.17	novel	4531	19	NA	NA	-11137	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	10.5499083933345	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTCTCGCTTGTTTGG	NA	False	NA	14	True	AATAAA	-21	NA	97295221	97393228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_97295357_97335009_97335172_97337334_97337378_97338995_97339092_97339270_97339350_97339478_97339534_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
m54284U_201203_174622/93128258/ccs	chr5	+	2799	12	NIC	ENSMUSG00000029550.12	novel	3204	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	271.163425457389	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTATTTTTTTTGA	1492	False	NA	18	True	AATACA	-16	NA	115149204	115236315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_115149675_115158792_115158931_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
m54284U_201203_174622/93194783/ccs	chr11	-	3165	14	NNC	ENSMUSG00000020717.20	novel	3233	14	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	239	junction_2	479.98502195566	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615168
m54284U_201203_174622/93194869/ccs	chr9	+	4340	26	NNC	ENSMUSG00000032115.15	novel	4489	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_17	172.618858761145	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTATGTGTTTGCTTCTT	NA	False	NA	1	True	AATAAA	-17	NA	44290869	44303660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299305_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
m54284U_201203_174622/93324547/ccs	chr4	+	4371	17	NIC	ENSMUSG00000028580.16	novel	4614	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	195.46319186742	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201203_174622/93324853/ccs	chr3	+	181	1	Intergenic	novelGene_1698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTTAAAAACAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	137529599	137529780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_137529600_137529800
m54284U_201203_174622/93325023/ccs	chr19	+	6761	19	NIC	ENSMUSG00000036097.9	novel	6249	20	NA	NA	0	482	combination_of_known_splicesites	FALSE	canonical	2	12	junction_18	47.7054038401894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACGTGTCTGGCAACTT	1055	False	NA	2	True	ATTAAA	-15	NA	44919601	44972220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44968994
m54284U_201203_174622/93390717/ccs	chr7	+	1176	3	NIC	ENSMUSG00000064264.15	novel	1182	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	184.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCGAGCTGCGTGAGTGT	NA	False	NA	36	True	AATAAA	-30	NA	24206523	24215107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_24206862_24209947_24210179_24214500
m54284U_201203_174622/93522316/ccs	chr7	+	3543	11	NIC	ENSMUSG00000060508.17	novel	3346	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	7.39256383131049	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAATGTTTCCTCAATGA	NA	False	NA	1	True	AATAAA	-20	NA	19725389	19796865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_19725614_19741948_19742019_19753060_19753368_19757035_19758615_19760440_19760606_19762379_19762545_19776275_19776444_19779686_19779858_19782606_19782778_19783348_19783520_19796513
m54284U_201203_174622/93588092/ccs	chr4	-	175	1	Intergenic	novelGene_2106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATGAACTT	NA	False	NA	NA	False	NA	NA	NA	124982414	124982239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_124982200_124982400
m54284U_201203_174622/93652255/ccs	chr16	-	1108	4	ISM	ENSMUSG00000022805.18	ENSMUST00000023501.16	3048	17	37040	0	36709	0	3prime_fragment	FALSE	canonical	3	28	junction_1	8.01387685344754	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACGTTGTTTGTAAAGCT	NA	False	NA	-3	True	AATAAA	-16	NA	38125465	38118115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_-_38118658_38122329_38122422_38122978_38123128_38125140
m54284U_201203_174622/93653708/ccs	chrX	-	1890	11	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1120	junction_8	123.424632873669	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72826323_72830380
m54284U_201203_174622/93716738/ccs	chr11	-	7025	34	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_18	13.9856281998075	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTCTCTTTGTGATCCT	7555	False	NA	-14	True	AGTAAA	-22	NA	85030794	84875267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927305_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
m54284U_201203_174622/9372557/ccs	chr17	+	1968	9	NNC	ENSMUSG00000042203.9	novel	3595	13	NA	NA	0	-22088	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_8	44.8857925740428	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATATGTATTTATGTATA	NA	False	NA	NA	False	AATAAA	-24	NA	29768764	29803780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29802942
m54284U_201203_174622/9373174/ccs	chr1	-	3029	6	NNC	ENSMUSG00000026374.15	novel	7063	6	NA	NA	55	1133	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	401.095799030606	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGCTGCTGTTTGAA	NA	False	NA	-4	True	AATAAA	-24	NA	118238911	118226246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238790
m54284U_201203_174622/93783072/ccs	chr19	+	1102	10	NIC	ENSMUSG00000042729.12	novel	1204	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	354.542515168108	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGATCCTGGACCTTTT	963	False	NA	21	True	AATAAA	-14	NA	8713190	8717981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8713270_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
m54284U_201203_174622/93784014/ccs	chr7	-	5589	28	NIC	ENSMUSG00000040488.19	novel	5118	30	NA	NA	0	0	intron_retention	FALSE	canonical	3	195	junction_22	122.922617209664	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGGCCTCTGCCTGCCTT	NA	False	NA	-6	True	ATTAAA	-16	NA	27033073	27004564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27022362_27022566_27022696_27023511_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
m54284U_201203_174622/93847626/ccs	chr13	-	1891	16	NIC	ENSMUSG00000021546.19	novel	2676	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_15	1991.76885093516	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTGGTCTTTTTTTT	5697	False	NA	-5	True	AATAAA	-14	NA	58549384	58539763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549348
m54284U_201203_174622/93847706/ccs	chr8	-	149	1	Intergenic	novelGene_4569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGAGTGAGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	123287784	123287635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_123287600_123287800
m54284U_201203_174622/93847784/ccs	chrX	-	161	1	Intergenic	novelGene_9493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGATGGAGAAAAACTAT	5563	False	NA	NA	False	NA	NA	NA	72269189	72269028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_72269000_72269200
m54284U_201203_174622/93849498/ccs	chr10	-	186	1	Intergenic	novelGene_5386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAGGAAAGT	NA	False	NA	NA	False	NA	NA	NA	69626149	69625963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_69626000_69626100
m54284U_201203_174622/93850084/ccs	chr5	-	177	1	Intergenic	novelGene_2501	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAATACCTAACTTT	NA	False	NA	NA	False	NA	NA	NA	27998533	27998356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_27998400_27998500
m54284U_201203_174622/93914423/ccs	chr2	+	2768	18	NIC	ENSMUSG00000027469.17	novel	4365	18	NA	NA	0	-624	combination_of_known_junctions	FALSE	canonical	3	164	junction_2	166.868304785146	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2812	False	NA	29	True	AATAAA	-28	NA	152690001	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_152690030_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
m54284U_201203_174622/93914855/ccs	chr7	+	177	1	Antisense	novelGene_ENSMUSG00000060034.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTTTTTGTTTTTT	NA	False	NA	NA	False	NA	NA	NA	127317733	127317910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_127317700_127317900
m54284U_201203_174622/93915033/ccs	chr11	-	2739	1	Genic_Genomic	ENSMUSG00000034297.15	novel	NA	NA	NA	NA	9029	200	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTCAGCTCTGAATAAT	NA	False	NA	NA	False	NA	NA	NA	86160397	86157658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_-_86157700_86160400
m54284U_201203_174622/93915348/ccs	chr3	+	3265	11	NNC	ENSMUSG00000008604.12	novel	362	2	NA	NA	173	0	at_least_one_novel_splicesite	FALSE	canonical	1	24	junction_1	418.18173083003	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGTGGTTTGTTTGTTG	6316	False	NA	NA	False	AATAAA	-26	NA	88461275	88477032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_88461366_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
m54284U_201203_174622/93980139/ccs	chr6	+	6582	38	NIC	ENSMUSG00000063870.13	novel	6537	39	NA	NA	0	0	intron_retention	FALSE	canonical	3	54	junction_3	120.03196555016	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTGGTTCTGTGTGGG	1789	False	NA	14	True	AATAAA	-18	NA	125073124	125107554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
m54284U_201203_174622/93981410/ccs	chr6	+	4072	13	NIC	ENSMUSG00000029761.17	novel	4096	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	77.3083203082882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTCTGTCTCGTGCATT	1305	False	NA	27	True	AATAAA	-45	NA	34686424	34752403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_34686633_34718723_34718871_34722553_34722951_34724820_34724905_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
m54284U_201203_174622/94045557/ccs	chrX	+	145	1	Intergenic	novelGene_9368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAAAGTCTTTGATG	NA	False	NA	NA	False	NA	NA	NA	7864703	7864848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_7864700_7864800
m54284U_201203_174622/94046377/ccs	chr18	+	2284	8	NIC	ENSMUSG00000073639.7	novel	6515	7	NA	NA	0	943	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	485.136463023655	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTGTGTCTTGTCTGTC	7	True	NA	19	True	ATTAAA	-16	NA	6765202	6790183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_6765333_6767643_6767717_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
m54284U_201203_174622/94177302/ccs	chr10	-	180	1	Intergenic	novelGene_5473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATAAAAGAGTTT	1842	False	NA	NA	False	NA	NA	NA	82688780	82688600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_82688600_82688800
m54284U_201203_174622/94177585/ccs	chr2	-	4159	28	NIC	ENSMUSG00000027284.17	novel	5996	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_25	20.8385919289247	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGCTGTTCTCCCTG	6114	False	NA	NA	False	AATAAA	-15	NA	120561999	120548666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560949_120560984_120561182_120561674_120561892
m54284U_201203_174622/94307171/ccs	chr11	+	3877	26	NNC	ENSMUSG00000020527.15	novel	4091	25	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	35.3332930817381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGTTTTAAGTA	NA	False	NA	25	True	AATAAA	-33	NA	84771178	84801957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_84771338_84771615_84771702_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
m54284U_201203_174622/94308647/ccs	chr17	-	3567	21	NNC	ENSMUSG00000024170.16	novel	3530	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_15	22.1909891622703	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACAGGCTGCTTCTGTG	NA	False	NA	-8	True	AATAAA	-14	NA	25334941	25318550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326414_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
m54284U_201203_174622/94371898/ccs	chr10	+	178	1	Intergenic	novelGene_5474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTTTTAAAAAAGGAGC	NA	False	NA	NA	False	NA	NA	NA	82751205	82751383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_82751200_82751400
m54284U_201203_174622/94373193/ccs	chr5	+	3452	15	NIC	ENSMUSG00000041870.18	novel	3717	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_9	98.811508872774	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGAGTTTCATTTCTC	1114	False	NA	29	True	AGTAAA	-19	NA	114913005	114943883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936578_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
m54284U_201203_174622/94374118/ccs	chr17	-	3101	6	NIC	ENSMUSG00000024050.19	novel	3578	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_5	77.8870977762042	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGGGCAAACAGCCAGT	NA	False	NA	-16	True	ATTAAA	-18	NA	32583437	32573034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32583155
m54284U_201203_174622/94504835/ccs	chr8	+	1634	9	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	268	junction_4	413.857897562678	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980658	70987978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
m54284U_201203_174622/94568572/ccs	chr2	+	1523	9	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1931	junction_6	165.514349831064	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813387	179818079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817750_179817866
m54284U_201203_174622/94635484/ccs	chr19	+	431	3	ISM	ENSMUSG00000024806.5	ENSMUST00000235954.2	739	5	6719	0	6719	0	3prime_fragment	FALSE	canonical	3	41	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACATCTCAATGTATA	NA	False	NA	4	True	NA	NA	NA	29682052	29685826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_29682117_29684207_29684322_29685573
m54284U_201203_174622/94702192/ccs	chr14	+	2893	12	ISM	ENSMUSG00000022096.15	ENSMUST00000163060.2	5278	18	7577	-4	7577	0	3prime_fragment	FALSE	canonical	2	7	junction_11	3.66804381851491	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTTCCGAGCATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	70800916	70810988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_70801123_70802741_70802824_70803468_70803633_70803749_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
m54284U_201203_174622/94767714/ccs	chr8	+	4689	33	NNC	ENSMUSG00000036879.16	novel	5351	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	30.84080533056	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCAATGTCTGCTTTCC	NA	False	NA	8	True	NA	NA	NA	86567619	86787270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_86567733_86569632_86569742_86601645_86601708_86602262_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86753085_86753177_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
m54284U_201203_174622/94831687/ccs	chr3	-	1898	7	NIC	ENSMUSG00000039795.15	novel	1610	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_5	243.390404266251	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCATTTGATCTAT	NA	False	NA	-3	True	AATAAA	-43	NA	10416377	10405014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411298_10412224_10412472_10413569_10413613_10416301
m54284U_201203_174622/94833158/ccs	chr6	+	3718	10	NIC	ENSMUSG00000033706.14	novel	2486	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	423	junction_8	59.890228803811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACAATGCCTTGTGGGG	NA	False	NA	28	True	AATAAA	-22	NA	85408970	85423417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
m54284U_201203_174622/94833435/ccs	chr5	+	2941	13	Fusion	ENSMUSG00000054256.12_ENSMUSG00000087292.2	novel	806	9	NA	NA	0	0	multi-exon	FALSE	canonical	2	9	junction_2	32.3525501313266	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTTATTCATGTGTG	4782	False	NA	15	True	AATAAA	-15	NA	115497155	115593757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr5_+_115497328_115548673_115548759_115571910_115571953_115573512_115573606_115576771_115576821_115578543_115578627_115579386_115579505_115583453_115583535_115585188_115585246_115588273_115588343_115588878_115589034_115589515_115589580_115591884
m54284U_201203_174622/94833440/ccs	chr9	+	2204	6	NNC	ENSMUSG00000025236.12	novel	2484	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_3	260.330866398896	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAAGTCTAATTGATTTT	NA	False	NA	19	True	ATTAAA	-20	NA	59198854	59223483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_59199150_59204808_59205035_59210771_59210835_59217580_59217632_59221035_59221135_59222013
m54284U_201203_174622/94896930/ccs	chr10	+	3696	9	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1246	junction_7	133.686608809559	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	NA	False	NA	18	True	AATAAA	-18	NA	128173602	128198348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128195405_128195812_128196023_128196836
m54284U_201203_174622/94897860/ccs	chr13	+	191	1	Intergenic	novelGene_7279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAACGATGAATGAAACAG	NA	False	NA	NA	False	NA	NA	NA	100786498	100786689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_100786500_100786700
m54284U_201203_174622/94897980/ccs	chr10	+	942	12	NNC	ENSMUSG00000078427.4	novel	1084	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	390	junction_1	1539.19360662578	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTATTAGGTGTTCC	NA	False	NA	NA	False	AATAAA	-18	NA	128657800	128713498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128657841_128660647_128660701_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
m54284U_201203_174622/94962564/ccs	chr4	+	7770	13	NIC	ENSMUSG00000060206.12	novel	4823	11	NA	NA	0	-259	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	9.10585891976516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATATGTGGCTCCTTTCCT	-13	True	NA	5	True	ATTAAA	-17	NA	54945047	55081071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_54945102_55007532_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
m54284U_201203_174622/94963196/ccs	chr14	-	5647	29	Intergenic	novelGene_7337	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_26	12.7375389286621	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTATGTGGACAGTGTGT	NA	False	NA	-1	True	AATAAA	-29	NA	10916241	10231200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_10232037_10232598_10232735_10243308_10243452_10244146_10244294_10249042_10249172_10249677_10249755_10250730_10250825_10253754_10253902_10254439_10254576_10255956_10256130_10258043_10258179_10259088_10259224_10259412_10259496_10262382_10262480_10269949_10270042_10278989_10279082_10302885_10303019_10315336_10316106_10317697_10317748_10324278_10324388_10327194_10327380_10347592_10347786_10359629_10359788_10378281_10378349_10432326_10432423_10507040_10507190_10516877_10517058_10748553_10748659_10915440
m54284U_201203_174622/95027957/ccs	chr6	+	3792	18	NIC	ENSMUSG00000029833.18	novel	3940	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	134.857684822591	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTATTGTTTTGTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37847745	37943231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_37848410_37880467_37880587_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
m54284U_201203_174622/95028530/ccs	chr10	+	4777	31	NIC	ENSMUSG00000019889.11	novel	4754	34	NA	NA	0	83	combination_of_known_splicesites	FALSE	canonical	3	10	junction_16	47.0358728348197	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGCATCCACATTTCAT	NA	False	NA	41	True	AATAAA	-29	NA	27950849	28472045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28438102_28438139_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
m54284U_201203_174622/9504191/ccs	chr17	+	2450	1	NIC	ENSMUSG00000037805.16	novel	830	6	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTGCCTGTGATT	NA	False	NA	0	True	AATAAA	-19	NA	28547556	28550006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_28547600_28550000
m54284U_201203_174622/9504870/ccs	chr14	-	6480	52	NNC	ENSMUSG00000044447.6	novel	9988	52	NA	NA	39542	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_51	14.5111817045914	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGAGTGAATTTTATTG	NA	False	NA	1	True	NA	NA	NA	68131339	67993067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68131222
m54284U_201203_174622/95092978/ccs	chr5	+	4068	16	NNC	ENSMUSG00000029267.18	novel	718	8	NA	NA	-4933	0	intron_retention	FALSE	canonical	0	0	junction_4	691.207703146376	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108208606	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_108208730_108226731_108226841_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201203_174622/95095215/ccs	chr1	-	6567	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	137	junction_25	239.116289700221	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
m54284U_201203_174622/95095573/ccs	chr13	+	174	1	Intergenic	novelGene_7010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAGAAAGATAA	NA	False	NA	NA	False	NA	NA	NA	31867924	31868098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_31867900_31868100
m54284U_201203_174622/95161044/ccs	chr8	+	4044	18	NIC	ENSMUSG00000031565.19	novel	4046	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_9	55.8011174250333	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATCCTGGGCGTGTGA	NA	False	NA	15	True	AATAAA	-18	NA	26008810	26064801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
m54284U_201203_174622/95225045/ccs	chr4	-	186	1	Intergenic	novelGene_2261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTCATCCACATGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136195361	136195175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_136195200_136195400
m54284U_201203_174622/95289544/ccs	chr14	-	4351	23	NIC	ENSMUSG00000042156.17	novel	4079	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_20	9.99721035469561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCGACTGTGGCTGCTT	NA	False	NA	-6	True	AGTAAA	-14	NA	119162872	119113669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161308_119161508_119161836_119161931_119162552
m54284U_201203_174622/95291574/ccs	chr7	+	182	1	Intergenic	novelGene_3709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAACAGCAGCAAAC	NA	False	NA	NA	False	NA	NA	NA	24962050	24962232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_24962000_24962200
m54284U_201203_174622/95356289/ccs	chr1	+	2181	6	NIC	ENSMUSG00000000544.15	novel	2515	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	10	junction_1	77.1974092829546	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTCACCCATC	NA	False	NA	10	True	AATAAA	-19	NA	165957985	165994079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_165958174_165980136_165980354_165985081_165985238_165991341_165991462_165992148_165992285_165992715
m54284U_201203_174622/95420616/ccs	chr17	-	3024	17	NIC	ENSMUSG00000041168.11	novel	2951	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	584	junction_14	61.0348261241072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTAAGCCTGAGTCTCAG	1571	False	NA	-12	True	AATAAA	-17	NA	56933887	56921296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56921564_56921635_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
m54284U_201203_174622/95420820/ccs	chr8	+	3105	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	31	junction_1	293.361537587219	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13389441_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201203_174622/95421651/ccs	chr7	-	5468	12	NIC	ENSMUSG00000058886.10	novel	2135	12	NA	NA	-481	0	intron_retention	FALSE	canonical	0	0	junction_11	38.2536121559155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTGTCAAGCCATTT	NA	False	NA	-2	True	AATAAA	-29	NA	140908084	140877092	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_140877530_140881512_140881600_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140904354
m54284U_201203_174622/95422459/ccs	chr14	-	1303	11	NNC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	-5049	0	at_least_one_novel_splicesite	FALSE	canonical	3	278	junction_1	39.5924235176378	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	NA	False	NA	-1	True	AATAAA	-16	NA	59607968	59586180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59607902
m54284U_201203_174622/95488441/ccs	chr19	-	3486	20	NIC	ENSMUSG00000024853.11	novel	3222	21	NA	NA	0	-363	intron_retention	FALSE	canonical	3	1448	junction_14	347.691994431407	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGCTCTTGAACCTCTCTC	3866	False	NA	-17	True	AATAAA	-28	NA	5345483	5324322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
m54284U_201203_174622/95554190/ccs	chr3	+	3699	23	NIC	ENSMUSG00000025437.16	novel	3886	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	116.242266249458	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAATGTTGAATTT	NA	False	NA	NA	False	AATAAA	-17	NA	152052148	152098970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
m54284U_201203_174622/95617217/ccs	chr9	+	7720	10	NNC	ENSMUSG00000037674.16	novel	7988	9	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_6	81.9667201361415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGATGTTAAGATAATTTA	680	False	NA	NA	False	ATTAAA	-21	NA	72439524	72530111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_72439940_72440096_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515024_72517587_72517671_72518902_72519111_72522318_72522615_72523918
m54284U_201203_174622/95619582/ccs	chr7	+	4988	27	NIC	ENSMUSG00000040940.19	novel	3214	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	251	junction_1	32.971746915724	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGGCGTT	9922	False	NA	36	True	AATATA	-18	NA	24603829	24626019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24619202_24621295_24621443_24621749_24621833_24621965_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
m54284U_201203_174622/95683654/ccs	chr5	-	3559	8	NNC	ENSMUSG00000039252.12	novel	6273	8	NA	NA	-78	-4345	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	14.7634407803015	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCTCAGAGCTCTGAA	NA	False	NA	NA	False	NA	NA	NA	52723723	52695203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_52696123_52703794_52703960_52711744_52711915_52713003_52713076_52717504_52717577_52719467_52719540_52719754_52721380_52723259
m54284U_201203_174622/9570243/ccs	chr12	+	200	1	Intergenic	novelGene_6539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCTGTTTTTTTAAGCC	4071	False	NA	NA	False	NA	NA	NA	3877241	3877441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_3877200_3877400
m54284U_201203_174622/9570569/ccs	chr1	-	3889	14	NIC	ENSMUSG00000042197.14	novel	3958	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_10	81.5917097540658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAGGAAATTTTTTCTA	NA	False	NA	-2	True	AATAAA	-17	NA	33853651	33800625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33825487_33825614_33844419_33844501_33852807_33852892_33853418
m54284U_201203_174622/9570801/ccs	chr2	-	1510	13	NIC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	110	combination_of_known_splicesites	FALSE	canonical	2	12	junction_5	129.679171419315	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATGGTCCATAAAATGAT	NA	False	NA	-39	True	AATAAA	-15	NA	48839288	48795217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
m54284U_201203_174622/95748257/ccs	chr3	+	5026	12	NIC	ENSMUSG00000028086.16	novel	4473	14	NA	NA	-665	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.1137792421748	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCCTGTTTCTTCCACT	NA	False	NA	25	True	AATAAA	-19	NA	84721909	84886505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_84723077_84810807_84811387_84862181_84862265_84865810_84865953_84872554_84872690_84874746_84874871_84876471_84876609_84878102_84878217_84879681_84879864_84881709_84881936_84883480_84883692_84884579
m54284U_201203_174622/95749093/ccs	chr4	-	172	1	Intergenic	novelGene_2366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAATTTTTATCACCA	NA	False	NA	NA	False	NA	NA	NA	148114924	148114752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_148114800_148114900
m54284U_201203_174622/95814905/ccs	chr7	-	2216	11	NIC	ENSMUSG00000030619.11	novel	2060	12	NA	NA	0	-71	intron_retention	FALSE	canonical	3	2155	junction_10	169.965172903157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTTATTTTTATTGTG	NA	False	NA	-9	True	AATAAA	-17	NA	89629767	89603938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_89604272_89604738_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
m54284U_201203_174622/95815145/ccs	chr9	+	4428	13	NIC	ENSMUSG00000032350.10	novel	3423	16	NA	NA	0	-127	intron_retention	FALSE	canonical	3	228	junction_1	21.646144126739	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGGCTCTATATCTCAT	4420	False	NA	25	True	AATAAA	-30	NA	77661816	77701640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
m54284U_201203_174622/95815289/ccs	chr2	-	755	2	Genic_Genomic	ENSMUSG00000070708.6	novel	822	1	NA	NA	-1750	0	multi-exon	FALSE	canonical	3	735	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCGGGCTGTGCTGGTTGT	919	False	NA	-3	True	AATAAA	-17	NA	162931525	162928953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_162929642_162931458
m54284U_201203_174622/95815953/ccs	chr2	-	2870	18	NIC	ENSMUSG00000027620.17	novel	2120	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_12	842.910861077957	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	156022158	155989168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009509_156009604_156009671_156014747_156014943_156019255_156019306_156020799_156020873_156021096_156021161_156021806
m54284U_201203_174622/95816373/ccs	chr17	+	5005	11	NIC	ENSMUSG00000024188.17	novel	4934	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_2	204.37027670383	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTCAGGTGTTTTGT	NA	False	NA	17	True	NA	NA	NA	26471924	26504478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
m54284U_201203_174622/95879217/ccs	chr5	+	980	6	NIC	ENSMUSG00000029404.16	novel	1192	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	229.659399981799	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTGTTGTGTTGCATTT	NA	False	NA	24	True	ATTAAA	-17	NA	124254184	124256259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_124254308_124254496_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
m54284U_201203_174622/95881474/ccs	chr12	+	5905	25	NIC	ENSMUSG00000034574.11	novel	5879	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	21.2589441961103	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTTTCTATGCATTA	1841	False	NA	22	True	AATAAA	-22	NA	71877889	72039107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
m54284U_201203_174622/95944792/ccs	chr2	+	3660	23	NIC	ENSMUSG00000026812.17	novel	7674	23	NA	NA	0	-1367	combination_of_known_junctions	FALSE	canonical	2	11	junction_16	13.3695101500725	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTTCATTTGCGTC	3465	False	NA	NA	False	NA	NA	NA	28531261	28577193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_28531303_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561894_28562404_28562517_28562796_28562916_28565199_28565261_28565674_28565780_28566011_28566571_28568173_28568218_28568978_28569131_28570034_28570218_28571202_28571314_28571923_28572047_28575734_28575923_28575996_28576159_28576665
m54284U_201203_174622/95946083/ccs	chr13	+	2759	6	NIC	ENSMUSG00000059288.15	novel	3575	7	NA	NA	154	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	105.78166192682	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35925449	36058046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_35925872_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
m54284U_201203_174622/96010935/ccs	chr6	+	1013	2	NNC	ENSMUSG00000051256.11	novel	1201	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTAAGACTGTCCTGTG	NA	False	NA	13	True	AATAAA	-17	NA	113419529	113425170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_113419591_113424218
m54284U_201203_174622/96076635/ccs	chr1	-	10546	44	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	0	intron_retention	FALSE	canonical	3	1514	junction_35	376.877721094857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACGTCATTTCTTTT	NA	False	NA	-6	True	AATAAA	-18	NA	71692359	71624678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
m54284U_201203_174622/96077525/ccs	chr4	-	5707	38	NIC	ENSMUSG00000039298.17	novel	11847	37	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_10	42.090739921554	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCAGCTGCCTCTGTCCTC	NA	False	NA	-4	True	AATAAA	-15	NA	70328680	70141259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70165184_70165212_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
m54284U_201203_174622/96143744/ccs	chr9	+	769	3	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	10573	6	10543	0	3prime_fragment	FALSE	canonical	3	41	junction_1	28	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGTGGAATTGGTGT	3024	False	NA	3	True	AATAAA	-15	NA	62775958	62783197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_62776100_62778547_62778737_62782758
m54284U_201203_174622/96208350/ccs	chr4	+	1435	9	NIC	ENSMUSG00000054405.15	novel	1401	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	136	junction_2	992.348910099165	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGGTCTCCTCCTCGGGT	2358	False	NA	19	True	AATAAA	-19	NA	132262887	132281053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_132262975_132265497_132265600_132269031_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
m54284U_201203_174622/96209697/ccs	chr18	+	3498	18	NIC	ENSMUSG00000003779.17	novel	3674	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	938	junction_12	101.336911094492	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGGGACAGAAAATTGATA	6249	False	NA	53	True	TATAAA	-2	NA	34758059	34765888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
m54284U_201203_174622/96272470/ccs	chr3	+	2483	21	NIC	ENSMUSG00000028034.16	novel	2552	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	479.585578911627	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGGGTAAAGGATTCAT	NA	False	NA	43	True	AATAAA	-33	NA	151916118	151938426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_151916338_151919613_151919705_151920461_151920525_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031
m54284U_201203_174622/96274006/ccs	chrX	-	4263	29	NIC	ENSMUSG00000006678.7	novel	5346	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	93.0584904942114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTACTGTGTTTTGTTTTG	4277	False	NA	-2	True	AATAAA	-19	NA	92675761	92348372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_92349423_92419196_92419291_92464172_92464290_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
m54284U_201203_174622/96274539/ccs	chr13	-	5763	21	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	0	-199	combination_of_known_splicesites	FALSE	canonical	2	5	junction_13	70.0317606518642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTTAACAGTTTTCA	NA	False	NA	NA	False	AATAAA	-13	NA	46881416	46833579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
m54284U_201203_174622/96339346/ccs	chr7	-	2548	1	Intergenic	novelGene_4002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTAAGTGCCTGCTA	NA	False	NA	NA	False	NA	NA	NA	106958676	106956128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_106956100_106958700
m54284U_201203_174622/9634546/ccs	chr11	+	4280	23	NIC	ENSMUSG00000018548.16	novel	5632	24	NA	NA	111	-1200	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	105.147829819272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTCTGCAGTTTATTC	2027	False	NA	26	True	AATAAA	-16	NA	87018013	87110309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_87018321_87020541_87020644_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
m54284U_201203_174622/9634570/ccs	chr8	+	3668	15	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	179	junction_1	106.215822834492	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415917	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416260_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201203_174622/9635085/ccs	chr7	+	179	1	Intergenic	novelGene_4064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATCCATCCTTA	NA	False	NA	NA	False	NA	NA	NA	121625662	121625841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_121625700_121625800
m54284U_201203_174622/9635429/ccs	chr4	-	4792	28	NIC	ENSMUSG00000028433.15	novel	4380	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	748	junction_16	85.9337640103247	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGGTCTCCGTGTTCT	209	False	NA	-6	True	AATAAA	-12	NA	41275144	41194315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
m54284U_201203_174622/9636605/ccs	chr2	+	6714	21	NNC	ENSMUSG00000035168.17	novel	3392	2	NA	NA	-3639	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	36.7370385306165	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTTGGCATTCATTG	7835	False	NA	11	True	AATAAA	-13	NA	59606415	59676059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_59606661_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
m54284U_201203_174622/96405451/ccs	chr8	+	1841	12	NIC	ENSMUSG00000003808.19	novel	1826	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_2	188.163108424316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTGTCATTCATTTCA	NA	False	NA	38	True	AATAAA	-38	NA	85583617	85595886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85583811_85587534_85587587_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594548_85594637_85594716_85594852_85594968_85595494
m54284U_201203_174622/96470356/ccs	chr15	-	6299	40	NIC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	0	0	intron_retention	FALSE	canonical	3	242	junction_21	71.6320130887392	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199514	89172485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89172929_89173014_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
m54284U_201203_174622/96535583/ccs	chr2	+	3224	1	NIC	ENSMUSG00000027180.13	novel	4740	11	NA	NA	-6	-26429	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCATACTAATATTTCCC	NA	False	NA	NA	False	NA	NA	NA	103858182	103861406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_103858200_103861400
m54284U_201203_174622/96536010/ccs	chr7	+	4275	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	52.7403511825352	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285674	35338651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301855_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
m54284U_201203_174622/96601950/ccs	chr9	-	177	1	Intergenic	novelGene_4996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	89965826	89965649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_89965600_89965800
m54284U_201203_174622/96665948/ccs	chr8	+	1702	6	NIC	ENSMUSG00000019433.10	novel	1522	7	NA	NA	0	95	intron_retention	FALSE	canonical	3	964	junction_1	105.526489565417	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGCTCTCCCTGCTTT	NA	False	NA	21	True	NA	NA	NA	84379314	84391418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_84379367_84387587_84387910_84388583_84389045_84389677_84389791_84390548_84390631_84390746
m54284U_201203_174622/96731407/ccs	chr14	-	2929	13	NIC	ENSMUSG00000071350.13	novel	2995	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	30.6467326516584	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTGTGATTATTAT	NA	False	NA	NA	False	TATAAA	-13	NA	59678333	59639457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59668591_59668718_59674885_59675215_59678035
m54284U_201203_174622/96732205/ccs	chrX	+	3510	22	NIC	ENSMUSG00000031066.11	novel	3467	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	70.5175554282958	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTTTTGAGTGTT	NA	False	NA	3	True	NA	NA	NA	20570172	20586778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_20570359_20573150_20573222_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
m54284U_201203_174622/96733409/ccs	chr10	+	1641	6	NIC	ENSMUSG00000075706.12	novel	959	7	NA	NA	121	0	intron_retention	FALSE	canonical	3	7423	junction_4	778.071050740226	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	776	False	NA	4	True	AATAAA	-14	NA	79889442	79892273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79891782_79891873_79891934_79892019
m54284U_201203_174622/96798334/ccs	chr2	+	5047	36	NNC	ENSMUSG00000051329.14	novel	5684	37	NA	NA	2177	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_33	108.152900080943	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTATATTAAGATTTAT	NA	False	NA	16	True	AATAAA	-18	NA	90509735	90566672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563127_90563251_90563449_90563555_90565758
m54284U_201203_174622/96865054/ccs	chrX	-	1871	12	NIC	ENSMUSG00000031370.13	novel	2735	11	NA	NA	0	-829	combination_of_known_junctions	FALSE	canonical	3	79	junction_11	287.202321637063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGTCTTTTTATAGC	NA	False	NA	-6	True	AATAAA	-17	NA	162741657	162719267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269_162741416_162741522
m54284U_201203_174622/96928438/ccs	chr3	-	3856	29	NIC	ENSMUSG00000042520.17	novel	4073	28	NA	NA	0	-245	combination_of_known_junctions	FALSE	canonical	3	140	junction_3	287.370148137931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGTCTCCTCCTTTA	3547	False	NA	-4	True	AATATA	-14	NA	89959782	89907844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89908299_89909124_89909176_89909585_89909781_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201203_174622/96928690/ccs	chr5	+	3248	14	NIC	ENSMUSG00000062761.8	novel	3299	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	94.5426236800507	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCCTTGCTG	7191	False	NA	16	True	AATAAA	-17	NA	31609823	31639098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31609922_31610498_31610558_31622795_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
m54284U_201203_174622/96928809/ccs	chr14	+	2459	8	NIC	ENSMUSG00000021748.10	novel	1513	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	2317	junction_5	168.496714677595	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTCTTGGAGTACTATT	NA	False	NA	NA	False	AATAAA	-16	NA	14296835	14303777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14300065_14300336_14300429_14302918_14303061_14303291
m54284U_201203_174622/96928814/ccs	chr15	-	1434	5	Intergenic	novelGene_7765	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_3	26.2916336502698	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGTCCCATCAGATCCT	NA	False	NA	NA	False	NA	NA	NA	75754364	75741182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_75741955_75743124_75743208_75744217_75744419_75748129_75748389_75754245
m54284U_201203_174622/96993652/ccs	chr6	+	4419	26	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_24	11.9895954894233	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTGTTAGAATCTTT	NA	False	NA	17	True	AATAAA	-17	NA	140369653	140542836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140489445_140489914_140496486_140496950_140498440_140498525_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280_140539384_140541974
m54284U_201203_174622/96994029/ccs	chr8	+	4733	1	Antisense	novelGene_ENSMUSG00000031970.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGCCGGCGTAG	2713	False	NA	NA	False	NA	NA	NA	124234208	124238941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_+_124234200_124238900
m54284U_201203_174622/96995730/ccs	chr15	-	1642	10	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_3	452.536554692915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952773	75942038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
m54284U_201203_174622/97060326/ccs	chr9	-	3244	11	NIC	ENSMUSG00000032423.13	novel	3404	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_10	321.482876682414	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAGGCGAGTGTAACTT	NA	False	NA	-15	True	AATAAA	-18	NA	88364249	88334741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_88336346_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88364108
m54284U_201203_174622/97061386/ccs	chr14	-	1843	14	NIC	ENSMUSG00000042354.8	novel	1947	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_13	323.627132221727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAAGATTTATTTAT	NA	False	NA	-1	True	AATAAA	-20	NA	30741050	30734389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738769_30738865_30739013_30739125_30739232_30739371_30740885
m54284U_201203_174622/97125343/ccs	chr8	-	8082	48	NIC	ENSMUSG00000036550.17	novel	8390	49	NA	NA	0	0	intron_retention	FALSE	canonical	3	674	junction_30	246.463724688124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTCTGAAACTTCTTG	NA	False	NA	-18	True	AATATA	-13	NA	96534092	96446783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
m54284U_201203_174622/97125846/ccs	chr9	-	166	1	Intergenic	novelGene_4884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTTTAAAAAATGATTT	1233	False	NA	NA	False	NA	NA	NA	65511479	65511313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65511300_65511500
m54284U_201203_174622/97126569/ccs	chr10	+	175	1	Intergenic	novelGene_5405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGAGAGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	75374756	75374931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75374800_75374900
m54284U_201203_174622/97190000/ccs	chr9	-	172	1	Intergenic	novelGene_5067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATATTAAAACAATAAAA	NA	False	NA	NA	False	NA	NA	NA	106708359	106708187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_106708200_106708400
m54284U_201203_174622/97191620/ccs	chr12	+	6993	19	NNC	ENSMUSG00000010608.16	novel	4226	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	149	junction_9	121.001377402628	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGTAGTGCATATA	3986	False	NA	13	True	AATAAA	-13	NA	83679030	83729897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
m54284U_201203_174622/97192014/ccs	chr9	+	199	1	Intergenic	novelGene_5078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTCTTGAGTCCCCAA	NA	False	NA	NA	False	NA	NA	NA	108130419	108130618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108130400_108130600
m54284U_201203_174622/97192033/ccs	chr4	-	2404	1	Antisense	novelGene_ENSMUSG00000066036.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGGGTACCAACCAG	9299	False	NA	NA	False	NA	NA	NA	139177273	139174869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_139174900_139177300
m54284U_201203_174622/97258170/ccs	chr11	+	4120	6	NIC	ENSMUSG00000038845.12	novel	1799	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	4384	junction_3	763.782796349852	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGGGTGTGTTTTCAATT	NA	False	NA	11	True	AATAAA	-25	NA	95557825	95571599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95568973_95570519
m54284U_201203_174622/97321594/ccs	chr6	+	4247	31	NNC	ENSMUSG00000024104.12	novel	4307	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	74.7570955383724	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGTGCATGGAAGCT	NA	False	NA	31	True	AATAAA	-34	NA	116185055	116239647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_116185086_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
m54284U_201203_174622/97322354/ccs	chr12	+	2746	11	NNC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	75.7063405534834	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807618	117842441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_117807693_117812532_117812694_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
m54284U_201203_174622/97322501/ccs	chr13	+	3512	8	NIC	ENSMUSG00000059288.15	novel	3575	7	NA	NA	143	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	99.7803710605427	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGAGTGTTTCTCTGCG	NA	False	NA	18	True	AATAAA	-19	NA	35925438	36058046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_35925872_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
m54284U_201203_174622/97387080/ccs	chr6	+	5543	18	NIC	ENSMUSG00000071226.12	novel	4849	19	NA	NA	0	565	combination_of_known_junctions	FALSE	canonical	3	38	junction_7	29.3618399808122	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGTATATCCTATAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	120643329	120744430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_120643669_120697828_120697924_120708220_120708405_120710691_120710832_120711518_120711624_120714059_120714110_120715116_120715287_120727812_120727967_120729600_120729731_120731485_120731524_120731609_120731702_120732477_120732605_120733509_120733899_120734526_120734653_120734775_120735593_120738101_120739519_120742232_120742345_120743372
m54284U_201203_174622/97452304/ccs	chr15	+	176	1	Intergenic	novelGene_7772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGTTCCCTTA	NA	False	NA	NA	False	NA	NA	NA	76162526	76162702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76162500_76162700
m54284U_201203_174622/97454230/ccs	chr13	-	2696	4	NIC	ENSMUSG00000021460.18	novel	2627	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	215.643223867573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGCTGCTCTCTCA	NA	False	NA	-24	True	AATAAA	-17	NA	53083717	53061080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_53063394_53073036_53073125_53073234_53073303_53083490
m54284U_201203_174622/97518515/ccs	chr4	+	1786	8	NIC	ENSMUSG00000035069.4	novel	1915	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	32.5739347406756	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTTAGTTTGTAG	42	False	NA	16	True	AATAAA	-28	NA	103171008	103223640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103188501_103188577_103210698_103210849_103223169
m54284U_201203_174622/97583107/ccs	chrX	-	233	1	Intergenic	novelGene_9699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTGCTGGAATCCCAA	NA	False	NA	NA	False	NA	NA	NA	158189945	158189712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_158189700_158189900
m54284U_201203_174622/97715065/ccs	chr7	-	178	1	Intergenic	novelGene_4124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATAAATCTA	NA	False	NA	NA	False	NA	NA	NA	130547464	130547286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_130547300_130547500
m54284U_201203_174622/97780874/ccs	chr6	-	887	5	NIC	ENSMUSG00000030057.16	novel	2178	5	NA	NA	0	78	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	5047.4819650495	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTTTCCGTGCCACTGG	NA	False	NA	31	True	NA	NA	NA	87828012	87820790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_87821139_87822103_87822306_87822446_87822540_87822658_87822776_87827885
m54284U_201203_174622/97781782/ccs	chr5	+	4860	8	NNC	ENSMUSG00000018604.19	novel	4856	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_1	357.22838975784	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGAAGTTGTGGTAATG	NA	False	NA	22	True	AATAAA	-16	NA	119809082	119822789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_119810474_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
m54284U_201203_174622/97910786/ccs	chr15	-	3861	24	NIC	ENSMUSG00000022432.8	novel	4047	25	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_15	32.4523789545692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTACTCTGGTCTTGT	NA	False	NA	-6	True	TATAAA	-17	NA	85016165	84948889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
m54284U_201203_174622/97911068/ccs	chr9	+	1351	8	NNC	ENSMUSG00000054836.13	novel	2219	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	63.5539301760035	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGGAGGTTGTCTTT	2213	False	NA	7	True	AATAAA	-17	NA	110134271	110150391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_110134418_110137258_110137337_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
m54284U_201203_174622/98043273/ccs	chr4	+	2845	8	NIC	ENSMUSG00000029028.15	novel	3468	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_7	148.085744604611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGCATCAGCAGCCTTA	NA	False	NA	16	True	AATAAA	-18	NA	154096259	154105970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087_154104343_154104893
m54284U_201203_174622/98044581/ccs	chr2	-	6290	27	NIC	ENSMUSG00000026867.20	novel	8339	27	NA	NA	0	-151	intron_retention	FALSE	canonical	2	6	junction_20	58.6270430562108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTGAATAGTTGGAA	5916	False	NA	-4	True	AATAAA	-15	NA	34644437	34566346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34612949_34613031_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
m54284U_201203_174622/98108374/ccs	chr17	-	3913	5	NIC	ENSMUSG00000023951.19	novel	3451	7	NA	NA	0	-232	intron_retention	FALSE	canonical	3	41	junction_1	206.452627738181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTCTCTCCTTTTTTA	NA	False	NA	-25	True	AATAGA	-14	NA	46343295	46328150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46329806_46334990_46335021_46335369_46336470_46339276_46339326_46342216
m54284U_201203_174622/98173292/ccs	chr6	-	2382	18	NIC	ENSMUSG00000029687.17	novel	2787	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_17	250.912742108186	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTCAAATTTGAATA	NA	False	NA	-58	True	NA	NA	NA	47571992	47507252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47571827
m54284U_201203_174622/98173903/ccs	chr10	+	2715	9	NNC	ENSMUSG00000019831.15	novel	2719	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	34	junction_5	78.456098392668	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTGTCGCTCTTCGAG	NA	False	NA	17	True	AATAAA	-19	NA	40759822	40814565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_40760067_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809111_40809282_40810472_40810653_40812105_40812735_40813641
m54284U_201203_174622/98175636/ccs	chr5	+	9275	20	NNC	ENSMUSG00000037795.15	novel	5308	18	NA	NA	51	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	27.6371422970797	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGTGTGAAGAAATCCTT	NA	False	NA	18	True	AATAAA	-16	NA	65921372	65987451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_65921589_65928729_65928785_65932927_65933007_65941652_65941720_65943352_65943705_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
m54284U_201203_174622/98239166/ccs	chr2	-	2935	25	NIC	ENSMUSG00000061136.17	novel	3773	26	NA	NA	0	262	combination_of_known_splicesites	FALSE	canonical	3	12	junction_24	134.405629584065	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCAGACGTCTCTACTTT	NA	False	NA	0	True	ATTAAA	-19	NA	53081262	53028921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53081160
m54284U_201203_174622/9830400/ccs	chr6	+	1804	9	NIC	ENSMUSG00000030041.10	novel	1945	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	187.231641289607	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTCAGAGCATTCC	NA	False	NA	12	True	ATTAAA	-17	NA	82923882	83007164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_82923934_82933389_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003386_83006750
m54284U_201203_174622/98305285/ccs	chr13	-	1312	9	NNC	ENSMUSG00000003062.14	novel	1128	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	340.955069437309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCATGCCCCTGCTTT	NA	False	NA	-3	True	AATAAA	-18	NA	19579965	19549125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_19549516_19549601_19549725_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
m54284U_201203_174622/983109/ccs	chr7	+	3050	15	NIC	ENSMUSG00000038943.17	novel	3008	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_13	298.086080225981	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTGTCTTCAATGG	NA	False	NA	18	True	AATAAA	-28	NA	79944212	79966007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963277_79963317_79964861
m54284U_201203_174622/9831419/ccs	chr4	-	1541	11	NIC	ENSMUSG00000028409.12	novel	2418	12	NA	NA	0	-574	combination_of_known_splicesites	FALSE	canonical	3	21	junction_10	388.074168168921	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTGCTCATAAGGGGG	25	True	NA	-13	True	AATAAA	-18	NA	40757831	40737115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40757776
m54284U_201203_174622/98370010/ccs	chr6	+	3407	8	NIC	ENSMUSG00000029767.17	novel	2670	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	350.870637246311	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTATGTGTCTTTTATT	-1	True	NA	115	True	AATAAA	-19	NA	29348117	29376671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_29348208_29356469_29356697_29361292_29361487_29361558_29361753_29366038_29366206_29366915_29366977_29372469_29372670_29374397
m54284U_201203_174622/98371139/ccs	chrX	+	6515	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-57	-166	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	31.1840415027373	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACCATGTCTCTTAGA	NA	False	NA	13	True	ATTAAA	-25	NA	84617570	84677909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_84617929_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
m54284U_201203_174622/983852/ccs	chr8	-	4045	11	NNC	ENSMUSG00000031714.10	novel	4985	11	NA	NA	21252	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	171.228765106801	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGAGCTGTGTTACT	NA	False	NA	-9	True	AATAAA	-15	NA	81585873	81491068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81585823
m54284U_201203_174622/984081/ccs	chr18	+	2635	21	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	201.829754991676	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737019	24771867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
m54284U_201203_174622/98436299/ccs	chr1	+	1790	6	NIC	ENSMUSG00000026520.9	novel	1580	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	1025	junction_3	48.6399013156894	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTCTCACTGTGTAG	16	False	NA	32	True	NA	NA	NA	180731857	180735653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180734253_180734354_180734519_180735041
m54284U_201203_174622/98502162/ccs	chr5	-	217	1	Intergenic	novelGene_2804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCGTGTTTCTGTAGTG	NA	False	NA	NA	False	NA	NA	NA	115551940	115551723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115551700_115551900
m54284U_201203_174622/98567492/ccs	chrX	+	2520	5	NIC	ENSMUSG00000046774.18	novel	1940	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	266	junction_2	13.1600721882519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTTGCAACTGT	NA	False	NA	NA	False	NA	NA	NA	100838261	100842248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100839695_100840283_100840444_100840965_100841049_100841321_100841990_100842072
m54284U_201203_174622/98568398/ccs	chr1	-	6981	15	NIC	ENSMUSG00000048874.16	novel	7567	16	NA	NA	0	443	combination_of_known_junctions	FALSE	canonical	3	35	junction_13	37.2287468475201	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTGTGTGATTTGAA	NA	False	NA	-1	True	GATAAA	-16	NA	30913002	30842183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30902067_30902337_30912658
m54284U_201203_174622/98633115/ccs	chr19	+	3083	16	NIC	ENSMUSG00000024807.19	novel	3464	16	NA	NA	147	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	31.1593752611741	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTAGAACGTGTCACCT	972	False	NA	12	True	AATAAA	-15	NA	6096838	6103741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_6097012_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
m54284U_201203_174622/98633740/ccs	chr12	+	7062	29	NIC	ENSMUSG00000036333.12	novel	6277	30	NA	NA	0	-220	combination_of_known_junctions	FALSE	canonical	3	25	junction_5	8.28017055922134	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACGGAGTTTTATTCAC	NA	False	NA	9	True	AATAAA	-19	NA	25024927	25109476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
m54284U_201203_174622/98634503/ccs	chr12	+	3237	13	NNC	ENSMUSG00000021136.14	novel	3496	13	NA	NA	-7394	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	57.1080846582455	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGCCTCTTTCTTTGG	NA	False	NA	17	True	AATAAA	-19	NA	81066187	81233188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_81066280_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
m54284U_201203_174622/98763939/ccs	chr9	+	3556	21	NIC	ENSMUSG00000057193.9	novel	3456	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	114	junction_20	32.821639203428	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGTATGCTTAATA	5736	False	NA	19	True	AATAAA	-19	NA	21249123	21266324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
m54284U_201203_174622/98829357/ccs	chr3	+	2141	10	NIC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	406	junction_9	24.2278280974789	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGGTTAGTTTTTTTCT	4481	False	NA	45	True	AATAAA	-31	NA	95222557	95230910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
m54284U_201203_174622/98960119/ccs	chr9	+	1731	15	NIC	ENSMUSG00000062867.14	novel	1858	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_9	848.284297862456	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGACAACTGATCTTT	1179	False	NA	21	True	AATAAA	-14	NA	108437668	108442768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
m54284U_201203_174622/9896219/ccs	chr5	+	3109	18	NIC	ENSMUSG00000014668.16	novel	3201	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	73.7381038437897	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	False	NA	22	True	AATAAA	-22	NA	110283743	110319838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_110283801_110283916_110284061_110288241_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
m54284U_201203_174622/99024899/ccs	chr4	+	4727	11	NIC	ENSMUSG00000029064.16	novel	3131	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1763	junction_1	813.751245774776	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGATGGTTATTT	NA	False	NA	27	True	AATAAA	-19	NA	155575826	155643726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155637977_155639471_155639689_155641627_155641744_155641927
m54284U_201203_174622/99090847/ccs	chr4	-	175	1	Intergenic	novelGene_2326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	145002215	145002040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_145002000_145002200
m54284U_201203_174622/99091371/ccs	chr2	+	2793	8	NNC	ENSMUSG00000054766.14	novel	2834	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	1331	junction_7	6398.9060417084	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	NA	False	NA	19	True	AATAAA	-24	NA	29956467	29962589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960559_29960930
m54284U_201203_174622/99092469/ccs	chr15	+	3438	17	NNC	ENSMUSG00000022394.15	novel	3487	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_9	161.470670227599	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGATATCAGATGAGT	NA	False	NA	17	True	AATAAA	-24	NA	81548134	81572516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566775_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
m54284U_201203_174622/99157085/ccs	chr12	+	1508	14	NNC	ENSMUSG00000021115.16	novel	3711	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_5	281.394015067798	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAATCTTTAGTCGTCA	NA	False	NA	NA	False	ATTAAA	-42	NA	105976541	106041479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106039877_106039938_106041265
m54284U_201203_174622/99157297/ccs	chr1	-	6549	41	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_16	245.45286716598	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
m54284U_201203_174622/99158147/ccs	chr11	-	1656	11	NIC	ENSMUSG00000018677.10	novel	1564	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	4398	junction_3	182.670085126164	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGGCTGTAGTGTC	7726	False	NA	95	True	NA	NA	NA	102298332	102293970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
m54284U_201203_174622/99222297/ccs	chr9	-	2651	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-135	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_5	132.25432982036	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGGTTTGTG	NA	False	NA	-12	True	TATAAA	-18	NA	114469166	114415168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
m54284U_201203_174622/99223246/ccs	chr8	+	3987	8	NIC	ENSMUSG00000013878.19	novel	741	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	27.4226184016042	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAATGTGTTATGTTT	NA	False	NA	7	True	AATAAA	-17	NA	26609691	26633899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_26609988_26610472_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
m54284U_201203_174622/99224230/ccs	chr2	-	179	1	Intergenic	novelGene_859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGTGACCAGCAGAGAGA	7598	False	NA	NA	False	NA	NA	NA	72879015	72878836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_72878800_72879000
m54284U_201203_174622/99288904/ccs	chr2	-	5271	26	NNC	ENSMUSG00000061136.17	novel	7374	26	NA	NA	0	1394	at_least_one_novel_splicesite	FALSE	canonical	3	206	junction_9	102.895628672942	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACTCTATTGTCTTGTT	NA	False	NA	-4	True	TATAAA	-14	NA	53081262	53026855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035940_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
m54284U_201203_174622/99289467/ccs	chr6	-	2236	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	8132	junction_7	324.444078386399	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1567	False	NA	-9	True	AATAAA	-17	NA	7693254	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682457_7685168_7685407_7689251_7689524_7693108
m54284U_201203_174622/99289759/ccs	chr14	-	1467	9	NNC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	1013.63834156962	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTTTTACTTAGGATT	NA	False	NA	-16	True	ATTAAA	-18	NA	63746205	63729795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_63730218_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63734465_63735046_63735090_63737569_63737770_63746158
m54284U_201203_174622/99354609/ccs	chr15	-	1847	4	NNC	ENSMUSG00000096883.3	novel	2588	4	NA	NA	0	242	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	36.3807030657127	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGATCGATCATCAGTCAT	NA	False	NA	-4	True	AATAAA	-26	NA	82097016	82091152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_82091792_82091951_82092099_82092663_82092798_82096089
m54284U_201203_174622/99354614/ccs	chr4	+	1435	7	NNC	ENSMUSG00000023286.17	novel	3483	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_5	433.720884389437	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	776	False	NA	37	True	TATAAA	-19	NA	156028306	156042171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040023_156040824_156040906_156041537
m54284U_201203_174622/99419777/ccs	chr4	+	2710	15	NIC	ENSMUSG00000028587.19	novel	3014	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_2	151.778588068009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTATGGTTTGGGGT	5272	False	NA	21	True	NA	NA	NA	108436650	108472030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_108436773_108445872_108445979_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
m54284U_201203_174622/99420167/ccs	chr5	-	1446	5	NIC	ENSMUSG00000025337.11	novel	1548	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	7	junction_4	362.553789112733	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTTGCATTTCTAGT	NA	False	NA	0	True	AATAAA	-17	NA	130284333	130274571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282846_130284050
m54284U_201203_174622/99485556/ccs	chr2	-	6740	20	NNC	ENSMUSG00000027288.17	novel	9085	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_19	309.671508559145	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTATTTGTCTGCATA	9785	False	NA	-6	True	AATAAA	-21	NA	120394324	120337300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394181
m54284U_201203_174622/99485781/ccs	chr7	+	4242	29	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_15	51.1070679843716	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285674	35338651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315308_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
m54284U_201203_174622/99486538/ccs	chr17	+	189	1	Intergenic	novelGene_8464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGTCAGAAACCAAATGAA	NA	False	NA	NA	False	NA	NA	NA	28785480	28785669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_28785500_28785700
m54284U_201203_174622/99549256/ccs	chr7	+	2967	18	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_16	241.594000131737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379_3662506_3663726
m54284U_201203_174622/99551906/ccs	chr6	+	178	1	Intergenic	novelGene_3200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	38339743	38339921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38339700_38339900
m54284U_201203_174622/99615332/ccs	chr4	-	1585	13	NNC	ENSMUSG00000028343.11	novel	2624	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_10	255.833876220922	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTTTAATTTTTTTCC	20	True	NA	-28	True	AATAAA	-14	NA	48279558	48194489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48238238_48238367_48241295_48241336_48243476_48243550_48279383
m54284U_201203_174622/99616737/ccs	chr1	-	6603	43	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	154	junction_40	284.907587356556	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7887	False	NA	17	True	NA	NA	NA	84817032	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84773410_84773537_84792543_84792691_84816949
m54284U_201203_174622/9961898/ccs	chr1	-	2904	4	ISM	ENSMUSG00000048874.16	ENSMUST00000186733.7	7567	16	-340	27092	0	0	5prime_fragment	FALSE	canonical	3	122	junction_2	3.09120616516523	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGAATGGCTATTTTTC	NA	False	NA	-12	True	AATAAA	-13	NA	30913002	30868511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_30870641_30876185_30876348_30902067_30902337_30912658
m54284U_201203_174622/9962929/ccs	chr2	+	1860	10	NIC	ENSMUSG00000026728.10	novel	2193	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	86.9850278020786	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGTTATTTTA	10	False	NA	14	True	AATAAA	-14	NA	13578762	13587637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_13578872_13579204_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
m54284U_201203_174622/9963916/ccs	chr2	+	2664	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-64	983	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	809.068256568618	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCCCTCTGAGTCCTGA	NA	False	NA	NA	False	AATAAA	-27	NA	162896542	162925602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162896724_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201203_174622/99680916/ccs	chr5	+	5539	21	NNC	ENSMUSG00000037210.17	novel	5536	21	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	17.252536045463	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCAGTCTGGTTGCTTTC	1443	False	NA	16	True	AATACA	-15	NA	34527276	34643800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_34527772_34567924_34568168_34577341_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
m54284U_201203_174622/99681364/ccs	chr3	+	4353	22	NIC	ENSMUSG00000015522.19	novel	2699	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	83.8073051654387	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTGTGTTGTGTGATA	NA	False	NA	NA	False	TATAAA	-1	NA	95341714	95404551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401011_95401172_95401757_95401925_95402614
m54284U_201203_174622/99681782/ccs	chr1	-	205	1	Intergenic	novelGene_157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACCTAGGTAAAGAGTG	NA	False	NA	NA	False	NA	NA	NA	62246039	62245834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_62245800_62246000
m54284U_201203_174622/99681799/ccs	chr6	+	4190	6	NIC	ENSMUSG00000043131.15	novel	371	3	NA	NA	0	-79	intron_retention	FALSE	canonical	1	1	junction_1	124.140243273485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGAAGTGTGTTAAC	NA	False	NA	18	True	AATAAA	-19	NA	83303341	83320678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_83303452_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
m54284U_201203_174622/99746403/ccs	chr8	+	752	4	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	158	junction_1	1562.13237453026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71126108_71130427_71130527_71130603_71130785_71131009
m54284U_201203_174622/99748261/ccs	chr7	-	2813	4	NIC	ENSMUSG00000056383.11	novel	2071	5	NA	NA	0	0	intron_retention	FALSE	canonical	1	2	junction_1	24.2257897474755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTTTTTCTGACTTTT	NA	False	NA	-14	True	AATAAA	-25	NA	41042736	41022346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_41024799_41026169_41026297_41037531_41037680_41042650
m54284U_201203_174622/99812557/ccs	chr12	+	176	1	Intergenic	novelGene_6926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTTGCACTTCTTTGC	2167	False	NA	NA	False	NA	NA	NA	111680320	111680496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111680300_111680500
m54284U_201203_174622/99877022/ccs	chr6	+	4393	8	NIC	ENSMUSG00000001517.15	novel	4652	8	NA	NA	0	-262	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	60.3665673115475	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTCGTACACAGCCTGGA	NA	False	NA	6	True	TATAAA	-19	NA	128339929	128352847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349493_128349567_128349739
m54284U_201203_174622/99943762/ccs	chr5	+	4355	18	NIC	ENSMUSG00000029267.18	novel	2355	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	721.64786436212	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAATGAGTTTTTCTTC	NA	False	NA	33	True	ATTAAA	-34	NA	108213582	108256870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_108213832_108217027_108217230_108221172_108221321_108228690_108228708_108228787_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
m54284U_201203_174622/99943945/ccs	chr15	-	6216	41	NNC	ENSMUSG00000036529.18	novel	6165	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_37	81.2205908313895	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGTACGCCTGCATCAG	NA	False	NA	-15	True	TATAAA	-17	NA	89199514	89172485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191802_89191889_89192049_89192224_89192363_89192687_89192774_89199264
m54284U_201203-1_174622/102500610/ccs	chr10	-	3230	11	NIC	ENSMUSG00000035365.16	novel	3594	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_4	10.555093557141	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTGGTTTATACTT	NA	False	NA	-11	True	ATTAAA	-13	NA	87982795	87927293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982713
m54284U_201203-1_174622/103549084/ccs	chr3	+	4264	23	NIC	ENSMUSG00000028059.17	novel	3700	26	NA	NA	63	0	intron_retention	FALSE	canonical	3	121	junction_5	65.9201871537101	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGAAATGAAGCGCCGT	8681	False	NA	15	True	ATTAAA	-17	NA	88522736	88555359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_88522829_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
m54284U_201203-1_174622/104531309/ccs	chr14	-	5037	12	NIC	ENSMUSG00000021969.9	novel	5186	13	NA	NA	0	-72	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	61.0282416672129	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGTTTTTTAATGGT	NA	False	NA	-14	True	AATAAA	-13	NA	58127733	58070231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_58074104_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
m54284U_201203-1_174622/104662263/ccs	chr10	-	5030	41	NIC	ENSMUSG00000001435.16	novel	5063	42	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	64.1984764227314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTTTATAAGCTGCCT	5935	False	NA	0	True	AATAAA	-20	NA	77002382	76888011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
m54284U_201203-1_174622/105383906/ccs	chr16	-	3976	19	NIC	ENSMUSG00000022789.16	novel	3893	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	332	junction_5	248.085384544699	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	False	NA	-15	True	AATAAA	-21	NA	16176823	16130101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
m54284U_201203-1_174622/105777875/ccs	chr2	+	4014	12	ISM	ENSMUSG00000036617.18	ENSMUST00000045555.11	5931	19	9573	24056	-171	769	internal_fragment	FALSE	canonical	3	169	junction_6	15.8979181546796	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACCAGGACAGGTGTTGA	4625	False	NA	NA	False	NA	NA	NA	20524430	20791279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854
m54284U_201203-1_174622/108856956/ccs	chr15	+	4414	8	NIC	ENSMUSG00000046897.18	novel	4241	8	NA	NA	-136	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	55.5683069266455	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTCTTTGAGAAGACTT	770	False	NA	25	True	AATAAA	-26	NA	102111946	102124041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_102112238_102113005_102113522_102113663_102113741_102116205_102116356_102116670_102116797_102117187_102117312_102117589_102117709_102121030
m54284U_201203-1_174622/109250484/ccs	chr4	+	5650	27	NIC	ENSMUSG00000043411.16	novel	5741	27	NA	NA	0	0	intron_retention	FALSE	canonical	3	659	junction_9	223.123509724359	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	591	False	NA	17	True	ATTAAA	-27	NA	137321538	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201203-1_174622/11274475/ccschrUn	chrUn_JH584304v1	-	5807	4	Intergenic	novelGene_9771	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	671	junction_3	95.6114823415868	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATAGCTTTGAATTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	59716	52668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_58836_59591
m54284U_201203-1_174622/113117611/ccs	chr14	+	3886	12	NIC	ENSMUSG00000035469.18	novel	3957	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	56	junction_1	78.7866666573425	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTACAGTTGTGGTTG	NA	False	NA	6	True	AATAAA	-16	NA	59438690	59474714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_59439034_59447376_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
m54284U_201203-1_174622/113511134/ccs	chr14	-	2653	8	NIC	ENSMUSG00000060373.16	novel	2847	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	714	junction_5	1223.61628639314	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGAAGCTGGTGTGT	8725	False	NA	-38	True	AATAAA	-19	NA	52341485	52311001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52341345
m54284U_201203-1_174622/114362718/ccs	chr2	+	8691	31	NIC	ENSMUSG00000039262.17	novel	10671	32	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_29	73.1573342567617	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTGTCGGTTTTCTATC	6650	False	NA	24	True	AATAAA	-40	NA	32041093	32124549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
m54284U_201203-1_174622/119474201/ccs	chr7	-	3827	21	NIC	ENSMUSG00000054808.16	novel	3877	21	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	395	junction_14	307.041247229098	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTCATCTTCTCCC	NA	False	NA	-1	True	AATAAA	-24	NA	28661715	28592672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
m54284U_201203-1_174622/12060615/ccs	chr16	+	2878	18	NIC	ENSMUSG00000025616.15	novel	3205	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	55.1537642982143	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATTAGAGTTTAAGT	NA	False	NA	10	True	AATAAA	-18	NA	87251914	87280405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
m54284U_201203-1_174622/121634943/ccs	chr10	-	6828	25	NIC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-140	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_20	10.9657769395921	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCAGTTCCTTTATGAG	NA	False	NA	-2	True	AATAAA	-25	NA	14421063	14278326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
m54284U_201203-1_174622/122161925/ccs	chr4	+	5707	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	237	junction_13	322.560439780494	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	591	False	NA	17	True	ATTAAA	-27	NA	137321538	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201203-1_174622/127598997/ccs	chr12	+	4457	11	NIC	ENSMUSG00000020572.9	novel	4527	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	260.465371978695	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTGTTAGTGAAATGTTA	NA	False	NA	-7	True	AATAAA	-18	NA	32870333	32903348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_32870626_32880165_32880253_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
m54284U_201203-1_174622/129696096/ccs	chr12	+	1700	14	NNC	ENSMUSG00000021115.16	novel	1742	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	69	junction_11	269.038568757883	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCGTTTATTGAATG	NA	False	NA	23	True	AATAAA	-29	NA	105976541	106041668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_105976618_106002798_106002964_106009095_106009152_106017193_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036786_106036875_106039877_106039938_106041265
m54284U_201203-1_174622/130614866/ccs	chr5	+	8425	21	NIC	ENSMUSG00000029313.19	novel	1613	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	246	junction_11	28.5472853350367	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGCCTGTGGCTTTTAT	NA	False	NA	24	True	AATAAA	-21	NA	103840239	104003188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_103840470_103863215_103863272_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
m54284U_201203-1_174622/133564678/ccs	chr1	+	3624	16	NNC	ENSMUSG00000023150.15	novel	3511	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_8	421.06447117857	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGTGGGATTTAATGT	NA	False	NA	17	True	ATTAAA	-21	NA	151220259	151240173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917_151231063_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
m54284U_201203-1_174622/13435647/ccs	chr6	+	2137	4	NNC	ENSMUSG00000097048.8	novel	2099	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_1	36.6454484061648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATTTTTAAATTTA	NA	False	NA	9	True	NA	NA	NA	86503252	86541431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_86504957_86509136_86509290_86540413_86540520_86541257
m54284U_201203-1_174622/135793227/ccs	chr8	+	4813	14	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	23.3298954920214	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCCCGGCTTCCTCCTGGC	NA	False	NA	7	True	AATAAA	-17	NA	111448107	111468032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458593_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
m54284U_201203-1_174622/142803111/ccs	chr17	-	5426	13	NIC	ENSMUSG00000024045.7	novel	4570	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	440	junction_9	68.5072481972204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATTTGTGTTCATTAATT	NA	False	NA	-3	True	AATAAA	-14	NA	32540119	32522647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
m54284U_201203-1_174622/142936775/ccs	chr17	+	2287	4	Intergenic	novelGene_8387	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	115	junction_3	58.5168541723	81	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCCCAAGTATGCTGCT	NA	False	NA	20	True	NA	NA	NA	17399584	17426649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_17399714_17422956_17423084_17423325_17423387_17424679
m54284U_201203-1_174622/14352730/ccs	chr10	+	4892	3	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	0	-269	at_least_one_novel_splicesite	FALSE	canonical	1	26	junction_1	62	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	NA	False	NA	12	True	AATAAA	-20	NA	75868483	75878799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_75868584_75869448_75869509_75874067
m54284U_201203-1_174622/143851631/ccs	chr5	-	4894	32	NNC	ENSMUSG00000039959.14	novel	7835	31	NA	NA	0	-2645	at_least_one_novel_splicesite	FALSE	canonical	2	120	junction_16	38.9079599109602	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGCCACTATCATTTT	9610	False	NA	-9	True	AATAAA	-14	NA	135518112	135438033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_135439727_135440041_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135517934
m54284U_201203-1_174622/144245216/ccs	chr17	-	2025	7	NNC	ENSMUSG00000063888.8	novel	2606	7	NA	NA	0	-595	at_least_one_novel_splicesite	TRUE	canonical	2	59	junction_5	819.849461113983	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTGCGTGTGAGTA	NA	False	NA	-7	True	AGTAAA	-12	NA	47093598	47085427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091476_47092708_47092818_47093544
m54284U_201203-1_174622/146475501/ccs	chr1	-	2776	20	NIC	ENSMUSG00000025968.17	novel	2661	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	163	junction_19	199.298478811329	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATTAAAGTGTGAAGT	NA	False	NA	NA	False	AATAAA	-31	NA	63215992	63182754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63211312_63211417_63215744
m54284U_201203-1_174622/149489024/ccs	chr4	+	5704	28	NIC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	intron_retention	FALSE	canonical	3	237	junction_13	327.669427582573	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTATCCGGAGTGAGTTC	591	False	NA	17	True	ATTAAA	-27	NA	137321538	137385842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201203-1_174622/150929666/ccs	chr11	+	3095	9	NIC	ENSMUSG00000018411.18	novel	5253	10	NA	NA	0	1684	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	219.953652788491	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAAAGGACGCAT	NA	False	NA	NA	False	NA	NA	NA	104122309	104220945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_104122434_104173193_104173307_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
m54284U_201203-1_174622/151651967/ccs	chr10	-	6061	26	NIC	ENSMUSG00000034667.9	novel	6005	25	NA	NA	-176	0	combination_of_known_junctions	FALSE	canonical	3	151	junction_17	270.192008764138	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGGAGTGGGCCTTTT	NA	False	NA	-8	True	AATAAA	-16	NA	121462413	121423284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447459_121447578_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
m54284U_201203-1_174622/162204298/ccs	chr12	-	2606	12	NIC	ENSMUSG00000056770.16	novel	2755	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_9	135.793596411783	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTTTGTTCCTTGTC	NA	False	NA	0	True	ATTAAA	-19	NA	108145573	108072689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108129231_108129325_108131321_108131432_108145411
m54284U_201203-1_174622/165086733/ccs	chr9	-	2157	17	NIC	ENSMUSG00000032582.15	novel	3716	21	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	80	junction_15	79.7133291473264	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTTGTTAAAGTTTTT	7559	False	NA	NA	False	AATAAA	-18	NA	107749974	107650761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107737547_107737659_107749847
m54284U_201203-1_174622/169148859/ccs	chrX	+	6523	10	NIC	ENSMUSG00000035476.10	novel	6364	9	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_2	16.9297750708808	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTGCATCTTTTCTGTG	NA	False	NA	NA	False	AATAAA	-25	NA	84617571	84678075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_84617772_84619155_84619217_84637257_84637361_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84667947_84668032_84671765_84671868_84674011
m54284U_201203-1_174622/1706027/ccs	chr1	-	8087	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9463	1507	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_41	270.908748968537	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGGTGCTGACAGAT	NA	False	NA	-7	True	ATTAAA	-22	NA	84827700	84700477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84822070_84822113_84827643
m54284U_201203-1_174622/171573789/ccs	chrX	+	8550	47	Fusion	ENSMUSG00000087424.2_ENSMUSG00000031010.18	novel	1452	7	NA	NA	-167	-165	multi-exon	TRUE	canonical	3	31	junction_2	270.94939241751	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTTGACTGTTAATT	NA	False	NA	NA	False	AATAAA	-45	NA	12908086	13035972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chrX_+_12908349_12909795_12909896_12919473_12919590_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
m54284U_201203-1_174622/173933703/ccs	chr2	+	4133	22	NIC	ENSMUSG00000027478.16	novel	4130	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	25.7619487720775	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCTGTGTGTTTTTTATC	NA	False	NA	26	True	ATTAAA	-18	NA	153491373	153529650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153512768_153512829_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517645_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
m54284U_201203-1_174622/175573855/ccs	chr9	+	5536	17	NIC	ENSMUSG00000032479.16	novel	6091	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_13	70.836712541944	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTATGTTGCTTCTGT	NA	False	NA	17	True	AATAAA	-17	NA	109760867	109913015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910802
m54284U_201203-1_174622/177668110/ccs	chr8	+	4315	5	ISM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	0	10387	0	-777	5prime_fragment	FALSE	canonical	3	606	junction_2	352.991147197773	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACATAAATATAAATAG	NA	False	NA	NA	False	AATAAA	-5	NA	20016465	20045111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811
m54284U_201203-1_174622/177866682/ccs	chr9	-	7084	28	NIC	ENSMUSG00000032340.9	novel	5414	28	NA	NA	0	-154	combination_of_known_junctions	FALSE	canonical	3	63	junction_21	18.8438096795025	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAACTGGTCTGGTCAA	NA	False	NA	-7	True	AATACA	-13	NA	58943724	58782123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
m54284U_201203-1_174622/18285140/ccs	chr19	-	5638	24	NIC	ENSMUSG00000024943.10	novel	5683	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	204	junction_5	69.1008413551705	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTATTTAAGATGAGAGTA	NA	False	NA	-11	True	AATAAA	-23	NA	23251182	23183814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
m54284U_201203-1_174622/18613544/ccs	chr12	+	5033	12	NIC	ENSMUSG00000035597.20	novel	4069	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	251	junction_3	66.9768678458935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7508	False	NA	8	True	AATAAA	-16	NA	65083107	65110160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201203-1_174622/21366343/ccs	chr5	-	2786	4	NIC	ENSMUSG00000072774.11	novel	2904	5	NA	NA	73	0	combination_of_known_splicesites	FALSE	canonical	3	193	junction_3	15.5134350376268	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAGGAATTGTGCGTT	NA	False	NA	-9	True	NA	NA	NA	105007863	104961034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_104963302_104964564_104964626_104964862_104964990_105007532
m54284U_201203-1_174622/22348230/ccs	chrX	+	6871	46	NIC	ENSMUSG00000079487.12	novel	6940	46	NA	NA	93	0	combination_of_known_junctions	FALSE	canonical	2	58	junction_41	20.6676941202185	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGAATGTACACATGG	NA	False	NA	31	True	AATACA	-22	NA	100317728	100341071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
m54284U_201203-1_174622/23791609/ccs	chr10	+	5015	4	NNC	ENSMUSG00000049764.9	novel	378	3	NA	NA	0	-269	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	64.4997846680299	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTTTTAAATCTTATT	NA	False	NA	12	True	AATAAA	-20	NA	75868483	75878799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_75868584_75868786_75868910_75869448_75869509_75874067
m54284U_201203-1_174622/24969636/ccs	chr9	+	4687	27	NIC	ENSMUSG00000006676.17	novel	4791	27	NA	NA	101	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_26	69.5979153601974	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTCTCTGTCTAAAT	NA	False	NA	17	True	AATAAA	-19	NA	108367901	108378898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108368095_108369669_108369930_108370166_108370200_108370334_108370464_108370548_108370683_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
m54284U_201203-1_174622/25494656/ccs	chr2	-	3280	5	NNC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	134	junction_4	54.0046294311886	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGACTTACTGTTTATTA	NA	False	NA	NA	False	AATAAA	-19	NA	106804742	106792871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804646
m54284U_201203-1_174622/27590706/ccs	chr1	-	5270	13	NIC	ENSMUSG00000039630.11	novel	7640	14	NA	NA	0	3298	intron_retention	FALSE	canonical	2	3444	junction_4	893.050526597211	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGTCTAATGGGATC	NA	False	NA	-5	True	ATTAAA	-16	NA	178165362	178156132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178163521_178163611_178163724_178164517
m54284U_201203-1_174622/3017218/ccs	chr17	-	3245	23	NIC	ENSMUSG00000036026.16	novel	3284	24	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_20	30.8694933524137	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTGGCAGTCCCTC	NA	False	NA	-6	True	AATAAA	-20	NA	45997185	45971096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45990162_45990243_45990457_45990641_45997042
m54284U_201203-1_174622/30214903/ccs	chr5	-	6633	20	NIC	ENSMUSG00000040351.12	novel	6426	20	NA	NA	-189	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_14	13.2648286332828	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATTCTCTGCCTTCTG	NA	False	NA	-5	True	AATAAA	-18	NA	3853114	3739999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
m54284U_201203-1_174622/30409089/ccs	chr15	-	4654	12	NIC	ENSMUSG00000022387.18	novel	5152	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	224.227710409981	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTCCCGTGTTTGGC	NA	False	NA	-5	True	NA	NA	NA	88618436	88571236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
m54284U_201203-1_174622/3212323/ccs	chr18	-	2409	14	NIC	ENSMUSG00000024454.17	novel	2032	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	500	junction_2	40.7767772406081	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATTAGTTAGGCCATG	NA	False	NA	-5	True	AATAAA	-21	NA	38088069	38070024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
m54284U_201203-1_174622/33686654/ccs	chr6	+	2130	10	NIC	ENSMUSG00000030264.15	novel	2163	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	204.840377481867	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGGAAGCGTTATTTT	NA	False	NA	3	True	ATTAAA	-16	NA	113023287	113045234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_113023421_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
m54284U_201203-1_174622/34734653/ccs	chr7	+	4683	13	NIC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	-505	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_11	7.93856620135735	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101916507	102086525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
m54284U_201203-1_174622/34997261/ccs	chr1	+	3039	9	NIC	ENSMUSG00000026634.17	novel	3343	8	NA	NA	0	-460	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	46.1652940530005	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATTCCAGTTGTTT	NA	False	NA	22	True	AATAAA	-22	NA	190661049	190678699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_190661102_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
m54284U_201203-1_174622/42075567/ccs	chr5	-	3442	10	NIC	ENSMUSG00000066900.12	novel	2425	12	NA	NA	56	0	intron_retention	FALSE	canonical	3	595	junction_3	32.8039443578375	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTGCCACGTGGTCT	NA	False	NA	-9	True	GATAAA	-13	NA	117254007	117229749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_117231097_117232974_117233060_117236335_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
m54284U_201203-1_174622/45877974/ccs	chr12	+	4300	16	NIC	ENSMUSG00000035597.20	novel	4314	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	137.107192452556	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCCTGTGGTCTCCTTC	7508	False	NA	8	True	AATAAA	-16	NA	65083107	65110160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_65083243_65089234_65089582_65090005_65090132_65090316_65090386_65090488_65090652_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
m54284U_201203-1_174622/46990491/ccs	chr9	+	5987	34	NIC	ENSMUSG00000037286.16	novel	3857	26	NA	NA	161	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	68.4680054375402	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTTATCCTGTTG	NA	False	NA	14	True	AATAAA	-14	NA	100480011	100840597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_100480163_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
m54284U_201203-1_174622/48957122/ccs	chr16	-	2363	16	Fusion	ENSMUSG00000034064.15_ENSMUSG00000002846.10	novel	1573	7	NA	NA	0	0	multi-exon	FALSE	canonical	3	59	junction_6	371.529176362892	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTCTGGATCGCCT	6230	False	NA	-16	True	AGTAAA	-22	NA	38370620	38318708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
m54284U_201203-1_174622/51774986/ccs	chr11	+	1046	2	Intergenic	novelGene_6093	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	74	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGGTTGATCACCTC	NA	False	NA	25	True	NA	NA	NA	79864504	79866015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79864672_79865136
m54284U_201203-1_174622/58917732/ccs	chr3	-	4973	23	NIC	ENSMUSG00000001052.16	novel	5128	24	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_20	30.141162376748	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGAGTGCAATTTTATT	NA	False	NA	0	True	TATAAA	-22	NA	129854506	129776407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827624_129834322_129835097_129854217
m54284U_201203-1_174622/6095658/ccs	chr13	-	1395	9	NIC	ENSMUSG00000015937.16	novel	2046	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	847	junction_5	145.981109651215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAGAGAAAAAAAA	6006	False	NA	NA	False	NA	NA	NA	56283343	56221978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244045_56252114_56252313_56252701_56252809_56276089_56276295_56283158
m54284U_201203-1_174622/6226546/ccs	chr11	+	5498	27	NNC	ENSMUSG00000034543.16	novel	5085	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	109	junction_21	96.2034410559514	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTTCAGTACATTC	NA	False	NA	75	True	TATAAA	-16	NA	3599190	3640477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634749_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
m54284U_201203-1_174622/6556313/ccs	chr17	-	2720	8	NIC	ENSMUSG00000023971.10	novel	2274	7	NA	NA	0	560	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	153.326382569461	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTCTGGGTATTTTGCCT	NA	False	NA	NA	False	NA	NA	NA	46985213	46976689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46978160_46978360_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
m54284U_201203-1_174622/7012870/ccs	chr1	-	5384	26	NIC	ENSMUSG00000009418.17	novel	13117	30	NA	NA	0	-1993	combination_of_known_junctions	FALSE	canonical	2	3	junction_25	17.2810184885035	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTATTTCTATTTTT	3365	False	NA	-14	True	AATAAA	-19	NA	135438122	135368578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135437941
m54284U_201203-1_174622/72550964/ccs	chr16	+	6048	31	NIC	ENSMUSG00000038084.17	novel	3230	30	NA	NA	0	-289	combination_of_known_junctions	FALSE	canonical	3	139	junction_4	92.8546295142155	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTATTGGAGAGTATC	NA	False	NA	12	True	ATTAAA	-23	NA	29398209	29473413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
m54284U_201203-1_174622/7406354/ccs	chr13	-	2856	15	NNC	ENSMUSG00000021577.15	novel	2900	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_5	489.096313706853	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGTCAAGGTGTTCT	NA	False	NA	-8	True	NA	NA	NA	74498358	74470372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476532_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
m54284U_201203-1_174622/76941338/ccs	chr18	+	3690	14	NIC	ENSMUSG00000024283.16	novel	5208	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	148.588745820857	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTACCTTGGCTTTTTT	12	True	NA	NA	False	AATAAA	-22	NA	7869196	7927519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917561_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
m54284U_201203-1_174622/79169342/ccs	chrX	+	6784	46	NIC	ENSMUSG00000079487.12	novel	6746	46	NA	NA	93	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_39	26.7088000479243	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTTGTATATTA	NA	False	NA	46	True	AATGAA	-34	NA	100317728	100340993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337228_100337398_100337477_100337563_100337619_100337693_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
m54284U_201203-1_174622/79692917/ccs	chr18	-	4115	22	NNC	ENSMUSG00000042211.8	novel	4254	22	NA	NA	0	86	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_7	64.6469568111548	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATTCTTGCCATGG	NA	False	NA	38	True	AATAAA	-9	NA	62681766	62637139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62648090_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
m54284U_201203-1_174622/8062969/ccs	chr16	+	4422	3	NNC	ENSMUSG00000054604.8	novel	4425	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	384	junction_2	450.5	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATTTTGTTTTGTGAGC	NA	False	NA	21	True	AATAAA	-30	NA	64672358	64679870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_+_64672600_64673161_64673389_64675916
m54284U_201203-1_174622/80807174/ccs	chr6	+	3271	12	NIC	ENSMUSG00000038346.19	novel	3603	12	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	68.436131774315	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTGAGCTACTGTGTA	NA	False	NA	8	True	AATAAA	-19	NA	124985995	125014833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124986209_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
m54284U_201203-1_174622/81921737/ccs	chr7	-	5064	28	NIC	ENSMUSG00000037519.18	novel	5181	31	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_7	44.5041265946274	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGAGTGCTGTGAACAG	NA	False	NA	-2	True	AATAAA	-24	NA	144107466	144030494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038949_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
m54284U_201203-1_174622/82511161/ccs	chr16	+	2724	7	ISM	ENSMUSG00000022900.15	ENSMUST00000023617.13	3042	8	14290	63	-7270	0	3prime_fragment	FALSE	canonical	3	275	junction_4	15.8683822601914	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAATTCCTGTGTTTGGC	NA	False	NA	6	True	ATTAAA	-18	NA	36528629	36547103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_36528783_36529840_36529991_36535862_36535983_36536468_36536616_36541899_36542032_36542244_36543042_36545878
m54284U_201203-1_174622/90179934/ccs	chr12	+	2734	10	NIC	ENSMUSG00000021175.16	novel	2957	10	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_2	33.9643967547428	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTGTCACCTGTCTGT	NA	False	NA	14	True	AATAAA	-14	NA	117807469	117842441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_117807693_117828764_117828900_117833743_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
m54284U_201203-1_174622/92800832/ccs	chr8	-	1599	3	ISM	ENSMUSG00000025317.8	ENSMUST00000057653.8	1249	7	20943	-654	3513	654	intron_retention	FALSE	canonical	3	94	junction_1	2	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAACAAAAATCCAAA	NA	False	NA	NA	False	NA	NA	NA	122650700	122642210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_122643247_122644726_122644883_122650293
m54284U_201203-1_174622/93388860/ccs	chr6	+	2487	4	NIC	ENSMUSG00000042079.14	novel	538	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	521	junction_1	2102.13325510592	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACAGCTTATGTACTC	3766	False	NA	NA	False	AATAAA	-17	NA	117883787	117902583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_117884170_117894430_117894560_117896059_117896121_117900668
m54284U_201203-1_174622/96274093/ccs	chr9	+	3489	21	NIC	ENSMUSG00000032612.15	novel	3662	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	156.074429359841	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGGGTGCAGTGTG	NA	False	NA	39	True	NA	NA	NA	108225095	108269719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108268178_108268268_108268877
m54284U_201203-1_174622/99878687/ccs	chr4	+	10449	38	NIC	ENSMUSG00000041235.13	novel	3462	5	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	42	junction_5	13.3684101547544	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATAGAATGCAGTGTAC	43	False	NA	16	True	AATAAA	-26	NA	8690469	8867659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_8690776_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856673_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
m54284U_201205_001509/100074172/ccs	chr19	+	195	1	Intergenic	novelGene_9269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	3527	False	NA	NA	False	NA	NA	NA	42150995	42151190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_42151000_42151200
m54284U_201205_001509/100075140/ccs	chr18	+	4204	1	Intergenic	novelGene_8823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTCTGGTTTGTTGCGT	NA	False	NA	NA	False	NA	NA	NA	16983731	16987935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_16983700_16987900
m54284U_201205_001509/100402798/ccs	chr1	-	1475	1	Antisense	novelGene_ENSMUSG00000034292.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAACAA	2065	False	NA	NA	False	NA	NA	NA	91457230	91455755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_91455800_91457200
m54284U_201205_001509/100403089/ccs	chr2	-	2421	10	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	250	junction_7	29.6498079439161	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9001	False	NA	-17	True	AATAAA	-17	NA	25246371	25242301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25242579_25242697_25242769_25243164_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
m54284U_201205_001509/100598322/ccs	chr9	-	180	1	Intergenic	novelGene_4778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATATTATTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	54782289	54782109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_54782100_54782300
m54284U_201205_001509/100664658/ccs	chr1	+	202	1	Intergenic	novelGene_352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTGTGGCTCCCCTTT	NA	False	NA	NA	False	NA	NA	NA	136617183	136617385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_136617200_136617400
m54284U_201205_001509/100665093/ccs	chr13	-	4122	10	NIC	ENSMUSG00000034928.17	novel	3941	11	NA	NA	59	0	intron_retention	FALSE	canonical	3	234	junction_9	166.725619203425	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCCCAAGCTGCCTCT	NA	False	NA	-16	True	AATAAA	-17	NA	54835562	54827222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54832302_54835306
m54284U_201205_001509/100993742/ccs	chr5	+	190	1	Intergenic	novelGene_3010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTGAACTATATCTC	NA	False	NA	NA	False	NA	NA	NA	139334082	139334272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_139334100_139334300
m54284U_201205_001509/101057891/ccs	chr18	+	2525	20	NIC	ENSMUSG00000024271.9	novel	3466	22	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_19	197.717782026908	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	False	NA	90	True	TTTAAA	-10	NA	24737019	24771867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24771450
m54284U_201205_001509/101059371/ccs	chr11	-	8269	4	NIC	ENSMUSG00000069793.13	novel	2128	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_3	15.4560308258262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATTTGTCTTTAAG	8620	False	NA	-6	True	NA	NA	NA	82881963	82869215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_82872813_82872979_82873704_82875382_82879135_82881767
m54284U_201205_001509/101187728/ccs	chr17	-	203	1	Intergenic	novelGene_8790	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATATGATAGTTATCT	NA	False	NA	NA	False	NA	NA	NA	94393190	94392987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_94393000_94393200
m54284U_201205_001509/101189405/ccs	chr12	+	213	1	Intergenic	novelGene_6600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGTGTCTCTAACTTG	NA	False	NA	NA	False	NA	NA	NA	25195718	25195931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_25195700_25195900
m54284U_201205_001509/101319619/ccs	chr6	-	4343	13	NIC	ENSMUSG00000040669.15	novel	3530	14	NA	NA	-104	0	intron_retention	FALSE	canonical	3	72	junction_10	292.481658969128	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACACCTACCCTAATCCA	8922	False	NA	-11	True	AATAAA	-14	NA	122316771	122295261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311924_122312043_122313816_122313975_122316556
m54284U_201205_001509/101319652/ccs	chr13	-	187	1	Intergenic	novelGene_7032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAACACACATTACCCAT	5885	False	NA	NA	False	NA	NA	NA	41420118	41419931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_41419900_41420100
m54284U_201205_001509/101385093/ccs	chr5	-	197	1	Intergenic	novelGene_2552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGGTTTGGGGCTGGG	NA	False	NA	NA	False	NA	NA	NA	34546511	34546314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_34546300_34546500
m54284U_201205_001509/10158941/ccs	chr1	-	2413	8	NIC	ENSMUSG00000002881.15	novel	3640	9	NA	NA	-98	732	combination_of_known_junctions	FALSE	canonical	3	5	junction_3	9.71008312455224	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCTTGACTTAAAAAC	NA	False	NA	NA	False	AATAAA	-14	NA	52539572	52497644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_52498466_52501246_52501364_52503943_52504104_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
m54284U_201205_001509/101713611/ccs	chr4	+	4957	20	NNC	ENSMUSG00000028580.16	novel	5058	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_3	173.705517034432	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396515_130428352_130428422_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201205_001509/101778630/ccs	chr3	+	2908	20	Fusion	ENSMUSG00000068917.13_ENSMUSG00000028049.16	novel	2154	13	NA	NA	0	0	multi-exon	FALSE	canonical	3	36	junction_12	335.943266216698	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89072123	89090072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
m54284U_201205_001509/101844460/ccs	chr1	-	198	1	Intergenic	novelGene_213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATCTGGAAAAGGGAG	NA	False	NA	NA	False	AAAACA	-5	NA	83158904	83158706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_83158700_83158900
m54284U_201205_001509/101844670/ccs	chr19	+	2899	11	NIC	ENSMUSG00000024968.15	novel	2823	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1016	junction_10	64.5169745105891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTCTTCCATGTGTGCTG	NA	False	NA	22	True	AATAAA	-17	NA	7245643	7252590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_7246454_7247129_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
m54284U_201205_001509/101908954/ccs	chr17	-	3898	8	NNC	ENSMUSG00000023883.14	novel	1663	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	365.443761551819	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCTGTCATCTTTTG	NA	False	NA	-2	True	AATAAA	-20	NA	15181535	15167999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176324_15176995_15177127_15181372
m54284U_201205_001509/101909868/ccs	chr5	-	196	1	Intergenic	novelGene_2593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGCCAGCAAGTAAATAG	NA	False	NA	NA	False	NA	NA	NA	65900435	65900239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_65900200_65900400
m54284U_201205_001509/101911257/ccs	chr11	+	176	1	Antisense	novelGene_ENSMUSG00000038352.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	991	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATGTCTTACCAG	216	False	NA	9	True	NA	NA	NA	97884803	97884979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_97884800_97885000
m54284U_201205_001509/102105192/ccs	chr15	-	206	1	Intergenic	novelGene_7992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTACTTAGAAATCACGT	NA	False	NA	NA	False	NA	NA	NA	100522277	100522071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100522100_100522300
m54284U_201205_001509/102107508/ccs	chr7	+	164	1	Intergenic	novelGene_3672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAACCCGAGTTT	NA	False	NA	NA	False	NA	NA	NA	16471279	16471443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_16471300_16471400
m54284U_201205_001509/102171877/ccs	chr5	+	3318	14	NNC	ENSMUSG00000000148.18	novel	3333	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	23.2126776216546	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTTCTCTTTGAGG	NA	False	NA	NA	False	NA	NA	NA	140690777	140705134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_140690831_140691707_140691852_140695892_140696048_140697263_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
m54284U_201205_001509/102237647/ccs	chr8	-	1634	1	Antisense	novelGene_ENSMUSG00000031706.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGCCTTGGTGCTTCTTC	4135	False	NA	NA	False	ATTAAA	-16	NA	84811494	84809860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_84809900_84811500
m54284U_201205_001509/10226223/ccs	chr17	+	174	1	Intergenic	novelGene_8552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35335790	35335964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35335800_35336000
m54284U_201205_001509/102433414/ccs	chr15	+	3989	10	NIC	ENSMUSG00000022407.11	novel	1932	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	18	junction_3	335.782373672496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832719	80853320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_80832902_80836397_80836602_80839820_80839866_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80850384_80851312_80851403_80851789_80851967_80852862
m54284U_201205_001509/102435163/ccs	chr17	-	177	1	Intergenic	novelGene_8755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	83886853	83886676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_83886700_83886900
m54284U_201205_001509/102498849/ccs	chr15	-	4354	36	NIC	ENSMUSG00000034022.9	novel	4410	37	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_22	104.867340882057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491711	76480008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
m54284U_201205_001509/102566566/ccs	chr2	-	3166	1	Genic_Genomic	ENSMUSG00000083817.2	novel	NA	NA	NA	NA	2442	2117	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAACAATAAAAGAAAGAA	9520	False	NA	NA	False	NA	NA	NA	176918314	176915148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_176915100_176918300
m54284U_201205_001509/102631816/ccs	chr1	-	197	1	Antisense	novelGene_ENSMUSG00000056211.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCACTTGGTAATACATT	NA	False	NA	NA	False	NA	NA	NA	128136799	128136602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_128136600_128136800
m54284U_201205_001509/102892140/ccs	chr13	-	3727	7	NIC	ENSMUSG00000113204.2	novel	1989	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	6	junction_6	38.8390553724241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCATGGTCATGATGTC	4826	False	NA	-5	True	NA	NA	NA	74765821	74753063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320_74765407_74765508
m54284U_201205_001509/102892876/ccs	chr16	-	189	1	Intergenic	novelGene_8260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCCTAATGAAGACAGC	NA	False	NA	NA	False	NA	NA	NA	43561844	43561655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_43561700_43561800
m54284U_201205_001509/10290672/ccs	chr17	+	2551	5	ISM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	-66	0	0	0	intron_retention	FALSE	canonical	3	263	junction_1	273.554382161939	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	21	True	AATAAA	-29	NA	48717041	48724294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248
m54284U_201205_001509/103351161/ccs	chr15	-	170	1	Intergenic	novelGene_7986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAGCAAAATCAAAACA	NA	False	NA	NA	False	NA	NA	NA	100101501	100101331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100101300_100101500
m54284U_201205_001509/103352666/ccs	chr4	-	3080	1	Intergenic	novelGene_2285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACCACCAGGAAATCAG	NA	False	NA	NA	False	NA	NA	NA	139001078	138997998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_138998000_139001100
m54284U_201205_001509/103416887/ccs	chr17	-	3664	1	Intergenic	novelGene_8550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTGTTTCTTTTATC	239	False	NA	-17	True	NA	NA	NA	35219364	35215700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35215700_35219400
m54284U_201205_001509/103416888/ccs	chr17	+	5395	21	NNC	ENSMUSG00000046201.10	novel	4866	20	NA	NA	0	60036	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_9	44.5786944627139	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGGTTGCAAGTCCT	9439	False	NA	16	True	AATAAA	-10	NA	3165246	3309170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219604_3219682_3221377_3221496_3227364_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034_3248499_3308012
m54284U_201205_001509/104139392/ccs	chr10	-	190	1	Intergenic	novelGene_5300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAGAACGGATCTTC	6436	False	NA	NA	False	NA	NA	NA	56222229	56222039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_56222000_56222200
m54284U_201205_001509/104203296/ccs	chr10	-	2611	1	NIC	ENSMUSG00000036676.15	novel	5993	14	NA	NA	0	-6740	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	100323188	100320577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_100320600_100323200
m54284U_201205_001509/10421152/ccs	chr10	-	205	1	Intergenic	novelGene_5515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATCAGCTACAAAGGTA	NA	False	NA	NA	False	NA	NA	NA	95341115	95340910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_95340900_95341100
m54284U_201205_001509/104270199/ccs	chr15	-	184	1	Intergenic	novelGene_7620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGAAGTGGTGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	8161847	8161663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_8161700_8161800
m54284U_201205_001509/104401588/ccs	chr18	-	4097	19	NIC	ENSMUSG00000041225.17	novel	4162	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_12	54.0629491346505	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGTGCGTTTTAGTT	-23	True	NA	-3	True	AATAAA	-34	NA	6135970	6025196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6056978_6056994_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
m54284U_201205_001509/104597377/ccs	chr11	-	3148	15	NNC	ENSMUSG00000020717.20	novel	3441	16	NA	NA	-9015	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	554.60145646239	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGCATTCAAGTGTC	409	False	NA	-9	True	AATAAA	-19	NA	106615235	106545042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_106545989_106552827_106552851_106570374_106570438_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844_106606011_106615208
m54284U_201205_001509/104597512/ccs	chr2	-	174	1	Intergenic	novelGene_1203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATTTATGTGTGAGTT	917	False	NA	NA	False	NA	NA	NA	162931527	162931353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_162931400_162931500
m54284U_201205_001509/104597805/ccs	chr14	+	192	1	Intergenic	novelGene_7458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAGAACAAGTGTGT	NA	False	NA	NA	False	NA	NA	NA	54660055	54660247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54660100_54660200
m54284U_201205_001509/104728032/ccs	chr2	+	188	1	Intergenic	novelGene_984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTACTCAATCATTTAG	NA	False	NA	NA	False	NA	NA	NA	112021646	112021834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_112021600_112021800
m54284U_201205_001509/104988678/ccs	chr5	+	199	1	Intergenic	novelGene_2866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTATGGATGAGAGTG	6899	False	NA	NA	False	NA	NA	NA	122316061	122316260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_122316100_122316300
m54284U_201205_001509/104991575/ccs	chr10	-	166	1	Intergenic	novelGene_5612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCCGGGCGTGGTGGC	572	False	NA	NA	False	NA	NA	NA	127888147	127887981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127888000_127888100
m54284U_201205_001509/105251309/ccs	chr9	-	191	1	Intergenic	novelGene_4659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATTGCCAGACTGGAGA	NA	False	NA	NA	False	NA	NA	NA	21204174	21203983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21204000_21204200
m54284U_201205_001509/105316625/ccs	chr8	-	185	1	Intergenic	novelGene_4405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTCAACACCCTCTTT	NA	False	NA	NA	False	NA	NA	NA	91676028	91675843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_91675800_91676000
m54284U_201205_001509/105514286/ccs	chr6	-	2718	11	NNC	ENSMUSG00000061838.8	novel	3367	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	230.496442488816	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCACAGTTCTTGTTTCT	NA	False	NA	-7	True	AATAAA	-22	NA	95695781	95451122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_95452146_95474577_95474699_95543364_95543992_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
m54284U_201205_001509/10554196/ccs	chr11	+	202	1	Intergenic	novelGene_6003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAGGTACAACAACAGT	NA	False	NA	NA	False	NA	NA	NA	75285191	75285393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75285200_75285400
m54284U_201205_001509/105907072/ccs	chr3	-	171	1	Intergenic	novelGene_1662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGAGAGAGAGCGA	NA	False	NA	NA	False	NA	NA	NA	121987294	121987123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_121987100_121987300
m54284U_201205_001509/106039840/ccs	chr4	-	2580	1	Antisense	novelGene_ENSMUSG00000028793.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGCAGCAACATAGCAGAT	NA	False	NA	NA	False	NA	NA	NA	128968508	128965928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_128965900_128968500
m54284U_201205_001509/106103542/ccs	chrX	+	1994	15	NIC	ENSMUSG00000079584.3	novel	2156	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	22	junction_1	181.154573753568	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAACCTCCCTGTCTGGC	NA	False	NA	9	True	TATAAA	-2	NA	56454513	56534127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_56454734_56463018_56463147_56463508_56463639_56467202_56467331_56468624_56468737_56478568_56478649_56481769_56481879_56482743_56482877_56484923_56485044_56485247_56485306_56508440_56508601_56509625_56509775_56513777_56513890_56517713_56517886_56533944
m54284U_201205_001509/106169283/ccs	chr11	+	185	1	Intergenic	novelGene_6167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGTGATAGGAAAATTC	NA	False	NA	NA	False	NA	NA	NA	87085467	87085652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87085500_87085700
m54284U_201205_001509/106170076/ccs	chr18	-	191	1	Intergenic	novelGene_8964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTTATGAGCCGGGCA	9466	False	NA	NA	False	NA	NA	NA	56779819	56779628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_56779600_56779800
m54284U_201205_001509/106235842/ccs	chr13	+	197	1	Intergenic	novelGene_6979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCAGCCTAAGGATGG	NA	False	NA	NA	False	NA	NA	NA	18738342	18738539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_18738300_18738500
m54284U_201205_001509/106367811/ccs	chr15	-	198	1	Intergenic	novelGene_7756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCTAAAACTACAGTAGC	NA	False	NA	NA	False	NA	NA	NA	73326586	73326388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_73326400_73326600
m54284U_201205_001509/106432031/ccs	chr16	+	204	1	Intergenic	novelGene_8133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATATTTGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19914278	19914482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_19914300_19914500
m54284U_201205_001509/106432848/ccs	chr3	+	2411	1	Intergenic	novelGene_1644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGTCTTAGCTGCAT	3762	False	NA	NA	False	NA	NA	NA	116601985	116604396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_116602000_116604400
m54284U_201205_001509/106629922/ccs	chr17	-	177	1	Intergenic	novelGene_8346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAATCGGTGAATT	5700	False	NA	NA	False	NA	NA	NA	6126909	6126732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_6126700_6126900
m54284U_201205_001509/10683634/ccs	chr4	+	187	1	Intergenic	novelGene_2292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTCTAGAAAAAGCTCA	4793	False	NA	NA	False	NA	NA	NA	139928250	139928437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_139928200_139928400
m54284U_201205_001509/106955498/ccs	chr15	-	4217	1	Antisense	novelGene_ENSMUSG00000056851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTCTAAGTAACACTCA	7068	False	NA	NA	False	NA	NA	NA	102392623	102388406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_102388400_102392600
m54284U_201205_001509/106957414/ccs	chr18	-	2948	15	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	889	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	292.041267701701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATTCCATATAATATT	NA	False	NA	-14	True	AATAAA	-14	NA	34784788	34765841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_34767218_34767445_34767566_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
m54284U_201205_001509/107021875/ccs	chr12	-	170	1	Intergenic	novelGene_6810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTCTTTCCTTTTTAAG	5946	False	NA	NA	False	NA	NA	NA	85325554	85325384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85325400_85325600
m54284U_201205_001509/107154254/ccs	chr17	-	1654	8	ISM	ENSMUSG00000058704.10	ENSMUST00000232987.2	1041	9	399	-369	-234	0	3prime_fragment	FALSE	canonical	2	11	junction_2	97.4017558405203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	NA	False	NA	NA	False	AATAAA	-19	NA	74602092	74507696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_74508321_74509255_74509361_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
m54284U_201205_001509/107218573/ccs	chr17	-	4012	13	NNC	ENSMUSG00000024251.11	novel	7784	38	NA	NA	13740	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_12	23.3789732214417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACCATCTCACATTGGC	NA	False	NA	-39	True	AATAAA	-17	NA	84662468	84497503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84662339
m54284U_201205_001509/107218758/ccs	chr7	+	200	1	Intergenic	novelGene_4084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCTTTCTGGGCAATC	NA	False	NA	NA	False	NA	NA	NA	126021683	126021883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_126021700_126021900
m54284U_201205_001509/107348110/ccs	chr5	+	175	1	Intergenic	novelGene_2916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTAAAAAAATACGTGT	NA	False	NA	NA	False	NA	NA	NA	125352162	125352337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_125352200_125352300
m54284U_201205_001509/107481879/ccs	chr6	-	178	1	Intergenic	novelGene_3132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAGCAC	8370	False	NA	NA	False	NA	NA	NA	29661545	29661367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_29661400_29661500
m54284U_201205_001509/10750354/ccs	chr4	+	165	1	Intergenic	novelGene_1735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGCCAGAGCAAGTGCC	NA	False	NA	NA	False	NA	NA	NA	8729494	8729659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_8729500_8729700
m54284U_201205_001509/107612705/ccs	chr5	-	189	1	Intergenic	novelGene_3096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	878	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTGTGTTGGAGACAA	4526	False	NA	NA	False	NA	NA	NA	150589988	150589799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_150589800_150590000
m54284U_201205_001509/107677867/ccs	chr5	+	189	1	Intergenic	novelGene_2937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTGTCTGGCTGCATTG	NA	False	NA	NA	False	NA	NA	NA	129107866	129108055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_129107900_129108100
m54284U_201205_001509/107743025/ccs	chr5	-	732	2	NNC	ENSMUSG00000058153.16	novel	4998	15	NA	NA	52802	295	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTAAAAGGTCTTTAC	7724	False	NA	NA	False	ATTAAA	-19	NA	112570191	112569383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_112569905_112569980
m54284U_201205_001509/108069305/ccs	chr6	-	4132	14	NIC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	2229	junction_13	311.859094263028	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTTGGTTCTGGTTTAA	NA	False	NA	-3	True	AATAAA	-16	NA	88875683	88860455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864953_88865153_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
m54284U_201205_001509/108071578/ccs	chr6	-	290	1	Antisense	novelGene_ENSMUSG00000108129.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAACTAAGAGG	8336	False	NA	NA	False	NA	NA	NA	125245885	125245595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_125245600_125245900
m54284U_201205_001509/108134562/ccs	chr13	+	187	1	Intergenic	novelGene_6968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAACAATTGTTCT	NA	False	NA	NA	False	NA	NA	NA	12497014	12497201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_12497000_12497200
m54284U_201205_001509/108265648/ccs	chr11	-	189	1	Intergenic	novelGene_6440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACTTTAAAAAAAAAGAAA	3940	False	NA	NA	False	NA	NA	NA	113767574	113767385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_113767400_113767600
m54284U_201205_001509/108268344/ccs	chr19	-	135	1	Intergenic	novelGene_9314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	3876	False	NA	NA	False	NA	NA	NA	46554911	46554776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_46554800_46554900
m54284U_201205_001509/108333729/ccs	chr15	-	199	1	Intergenic	novelGene_8013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGAGGATCTTTGAGT	NA	False	NA	NA	False	NA	NA	NA	102497651	102497452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102497500_102497700
m54284U_201205_001509/108399455/ccs	chr15	-	2665	18	NIC	ENSMUSG00000022241.7	novel	4005	19	NA	NA	0	349	intron_retention	FALSE	canonical	3	2899	junction_9	218.038709619952	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTGTCCTCACGGTTA	NA	False	NA	-1	True	AATAAA	-22	NA	11399687	11383741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
m54284U_201205_001509/108462186/ccs	chr5	-	1037	7	NIC	ENSMUSG00000000568.16	novel	1537	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	1793.44721602468	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGGCTCTTTTATCAT	NA	False	NA	NA	False	AATAAA	-17	NA	100126797	100108860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126753
m54284U_201205_001509/108462272/ccs	chr3	+	2478	12	NIC	ENSMUSG00000068917.13	novel	2154	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	173	junction_3	110.709134206235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCCCCAATCCCTGGAAT	NA	False	NA	18	True	AATAAA	-19	NA	89072123	89084228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89072414_89074341_89074512_89076001_89076231_89076924_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
m54284U_201205_001509/108464037/ccs	chr10	+	170	1	Intergenic	novelGene_5468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTTTTTTAAAAAATAGA	1879	False	NA	NA	False	NA	NA	NA	81342737	81342907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_81342700_81342900
m54284U_201205_001509/108725146/ccs	chr1	-	3991	5	NIC	ENSMUSG00000025959.14	novel	7662	4	NA	NA	0	-3400	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	5.02493781056044	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAATGCAAAA	NA	False	NA	NA	False	NA	NA	NA	64161441	64072005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058_64160299_64161360
m54284U_201205_001509/108922506/ccs	chrX	+	3850	25	NNC	ENSMUSG00000041718.17	novel	2996	19	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_15	306.015428873012	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143118806	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143118899_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134776_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143138579_143138649_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201205_001509/108923101/ccs	chr5	-	4377	12	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_7	59.023878064883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTGCATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	100648493	100589899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
m54284U_201205_001509/108987467/ccs	chr7	-	2362	17	NIC	ENSMUSG00000002968.10	novel	2287	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_16	272.122100352029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	6948	False	NA	-13	True	AATAAA	-10	NA	44541843	44528814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533675_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541568
m54284U_201205_001509/108989143/ccs	chrX	-	197	1	Intergenic	novelGene_9588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	102684251	102684054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_102684100_102684300
m54284U_201205_001509/109117615/ccs	chr14	+	3384	5	NIC	ENSMUSG00000037536.15	novel	3490	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	36.4623093070091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGGTCTTAAAATAAGAT	NA	False	NA	14	True	AATAAA	-22	NA	47710017	47769419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_47710175_47742442_47742590_47744721_47744904_47763661_47763772_47766631
m54284U_201205_001509/109184029/ccs	chr11	-	2214	1	NIC	ENSMUSG00000016559.15	novel	2514	6	NA	NA	0	-330	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTGTCAAACCTAAATT	NA	False	NA	-15	True	AATAAA	-14	NA	115915330	115913116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_115913100_115915300
m54284U_201205_001509/109250593/ccs	chr2	-	176	1	Intergenic	novelGene_917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAACCCAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	90625467	90625291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_90625300_90625500
m54284U_201205_001509/109380920/ccs	chr15	-	4806	10	NIC	ENSMUSG00000002524.18	novel	1821	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1167	junction_9	124.716369573149	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGAAGTCCCTGTGTCT	NA	False	NA	-8	True	CATAAA	-17	NA	75952773	75942038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75947481_75947585_75947682_75949449_75949552_75952698
m54284U_201205_001509/109382309/ccs	chr2	-	190	1	Intergenic	novelGene_854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTACCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	72285220	72285030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_72285000_72285200
m54284U_201205_001509/109446654/ccs	chr16	-	179	1	Intergenic	novelGene_8268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAGAAGAAGTTTA	NA	False	NA	NA	False	NA	NA	NA	46344314	46344135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_46344100_46344300
m54284U_201205_001509/10945764/ccs	chr7	-	2762	13	NIC	ENSMUSG00000002981.11	novel	4143	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	1363	junction_5	142.10469047697	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCAACCACCGCACCTC	5148	False	NA	-17	True	AATAAA	-21	NA	19398958	19367173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
m54284U_201205_001509/10946802/ccs	chr11	+	4474	11	NIC	ENSMUSG00000017221.15	novel	2148	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	1019	junction_3	96.003124949139	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGCACGGTGTCAG	NA	False	NA	16	True	AATAAA	-14	NA	98573416	98586805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
m54284U_201205_001509/109644218/ccs	chr3	+	278	1	Intergenic	novelGene_1349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCTCTCCATTTCTAG	NA	False	NA	NA	False	AATAAA	-27	NA	10418044	10418322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_10418000_10418300
m54284U_201205_001509/109707486/ccs	chr15	+	218	1	Intergenic	novelGene_7669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACCTCATATGAGCCG	NA	False	NA	NA	False	NA	NA	NA	33888123	33888341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_33888100_33888300
m54284U_201205_001509/11010885/ccs	chr8	-	181	1	Intergenic	novelGene_4460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGGCATTATA	NA	False	NA	NA	False	NA	NA	NA	107442333	107442152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107442200_107442300
m54284U_201205_001509/110167363/ccs	chrX	-	176	1	Intergenic	novelGene_9397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	13098688	13098512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_13098500_13098700
m54284U_201205_001509/110233728/ccs	chr19	-	2592	1	Antisense	novelGene_ENSMUSG00000024891.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAACAAAAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	5074348	5071756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr19_-_5071800_5074300
m54284U_201205_001509/110364383/ccs	chr17	+	235	1	Intergenic	novelGene_8690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACAAAACGGTCCCACG	NA	False	NA	NA	False	NA	NA	NA	66899503	66899738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_66899500_66899700
m54284U_201205_001509/110625986/ccs	chr8	+	146	1	Intergenic	novelGene_4242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	26423252	26423398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_26423300_26423400
m54284U_201205_001509/110756153/ccs	chr3	+	2869	9	NIC	ENSMUSG00000042613.10	novel	4479	11	NA	NA	0	-1988	intron_retention	FALSE	canonical	3	58	junction_1	11.9687092035858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAGAAGAAGAAAAAAAAAA	4377	False	NA	NA	False	NA	NA	NA	89344021	89356271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89353481_89353586_89353719_89354352_89355573_89355979
m54284U_201205_001509/110757571/ccs	chr5	-	214	1	Intergenic	novelGene_2705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGTTTTTTGTTTT	NA	False	NA	NA	False	NA	NA	NA	103517866	103517652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_103517700_103517900
m54284U_201205_001509/11077928/ccs	chr2	+	3071	18	NIC	ENSMUSG00000026843.16	novel	3268	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_2	158.592795361216	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTTGTTTGCTGGCC	656	False	NA	36	True	AATAAA	-37	NA	31462825	31507538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_31462966_31473166_31473273_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
m54284U_201205_001509/110888026/ccs	chr3	-	146	1	Intergenic	novelGene_1651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAAATGTTTCCCACC	NA	False	NA	NA	False	NA	NA	NA	121072424	121072278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_121072300_121072400
m54284U_201205_001509/111020158/ccs	chr9	+	5158	33	NIC	ENSMUSG00000032187.17	novel	5405	34	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	59	junction_1	136.781075079852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGGCTCCCTGGACTC	1332	False	NA	22	True	AATAAA	-19	NA	21527559	21614662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21527697_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
m54284U_201205_001509/111215293/ccs	chr7	-	3195	1	Antisense	novelGene_ENSMUSG00000002781.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCGCTGGAGAGATGACT	NA	False	NA	NA	False	NA	NA	NA	45559064	45555869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_45555900_45559100
m54284U_201205_001509/111281548/ccs	chr1	-	224	1	Intergenic	novelGene_534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAACCTGCATGATGTT	NA	False	NA	NA	False	AATACA	-31	NA	183117785	183117561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_183117600_183117800
m54284U_201205_001509/111413831/ccs	chr6	+	209	1	Intergenic	novelGene_3254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAACTGGTAGATCTCTG	NA	False	NA	NA	False	NA	NA	NA	47916319	47916528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_47916300_47916500
m54284U_201205_001509/111476851/ccs	chr6	-	156	1	Intergenic	novelGene_3223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAACA	3112	False	NA	NA	False	NA	NA	NA	39420347	39420191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39420200_39420300
m54284U_201205_001509/111477526/ccs	chr10	+	5005	1	NIC	ENSMUSG00000019923.15	novel	1834	8	NA	NA	13715	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGTCCTTGTTGCAT	NA	False	NA	9	True	AATAAA	-22	NA	72505790	72510795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_72505800_72510800
m54284U_201205_001509/111478039/ccs	chr13	-	3260	5	NIC	ENSMUSG00000021621.16	novel	1541	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	139	junction_4	11.5974135047432	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTTGAACTGATCA	NA	False	NA	NA	False	AATAAA	-16	NA	91955824	91944651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_91945374_91946941_91948823_91948984_91949136_91953869_91954280_91955728
m54284U_201205_001509/111478734/ccs	chr7	-	199	1	Intergenic	novelGene_3619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGAAAAAAAACCTCA	NA	False	NA	NA	False	NA	NA	NA	3454288	3454089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3454100_3454300
m54284U_201205_001509/111739638/ccs	chr8	+	4355	1	FSM	ENSMUSG00000110458.2	ENSMUST00000211922.2	111	1	-93	-4151	-93	4151	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20697891	20702246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_20697900_20702200
m54284U_201205_001509/11206685/ccs	chr12	+	171	1	Intergenic	novelGene_6581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTAAAAATGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	18312626	18312797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_18312600_18312800
m54284U_201205_001509/11208315/ccs	chr4	-	4337	8	NIC	ENSMUSG00000025413.14	novel	2121	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	276	junction_2	17.475347066712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTGTTTGTGTCCT	NA	False	NA	1	True	ATTAAA	-41	NA	106536141	106519452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_106520429_106522852_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
m54284U_201205_001509/112200133/ccs	chr11	-	2665	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	-167	5821	-167	-5821	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCGCCTCTTCTATATTT	NA	False	NA	-5	True	AATAAA	-16	NA	6426084	6423419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_6423400_6426100
m54284U_201205_001509/112200511/ccs	chr17	+	7450	1	Genic_Genomic	ENSMUSG00000068036.17	novel	NA	NA	NA	NA	-5	-42510	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	13980795	13988245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr17_+_13980800_13988200
m54284U_201205_001509/112656684/ccs	chr11	+	2687	9	NIC	ENSMUSG00000001755.13	novel	2138	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	106	junction_1	25.4972424979644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGTGGTTTTCTGTT	3571	False	NA	25	True	ATTAAA	-16	NA	100973450	100977445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_100973517_100973824_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
m54284U_201205_001509/112854425/ccs	chr12	+	184	1	Intergenic	novelGene_6721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCAGCTTTCTATATAC	NA	False	NA	NA	False	NA	NA	NA	75560698	75560882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_75560700_75560900
m54284U_201205_001509/112986466/ccs	chr1	+	188	1	Intergenic	novelGene_102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGAGATGGTA	NA	False	NA	NA	False	NA	NA	NA	42552576	42552764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_42552600_42552800
m54284U_201205_001509/113051241/ccs	chr9	+	4636	1	Antisense	novelGene_ENSMUSG00000042790.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	45800329	45804965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_45800300_45805000
m54284U_201205_001509/113183462/ccs	chr6	-	191	1	Intergenic	novelGene_3431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGCTTGGGCATGGTGG	NA	False	NA	NA	False	NA	NA	NA	115765116	115764925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_115764900_115765100
m54284U_201205_001509/113246657/ccs	chr1	-	227	1	Intergenic	novelGene_222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTTCCCATCATTCCT	NA	False	NA	NA	False	NA	NA	NA	85813508	85813281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_85813300_85813500
m54284U_201205_001509/113247446/ccs	chr11	-	155	1	Intergenic	novelGene_6392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGATGGCTCAGCTCTT	2350	False	NA	NA	False	NA	NA	NA	106613294	106613139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106613100_106613300
m54284U_201205_001509/11338187/ccs	chr2	-	194	1	Intergenic	novelGene_1177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTTGCAATCTTGTCAT	NA	False	NA	NA	False	NA	NA	NA	156058643	156058449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156058400_156058600
m54284U_201205_001509/11340316/ccs	chr1	+	278	1	Intergenic	novelGene_229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCCTGGCATATAGCTC	NA	False	NA	NA	False	ATTAAA	-6	NA	86383518	86383796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_86383500_86383800
m54284U_201205_001509/113443761/ccs	chr4	-	1096	9	NIC	ENSMUSG00000028455.16	novel	1874	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_5	1042.82857531811	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAACTGTCCTCATTGA	8929	False	NA	-7	True	AATAAA	-16	NA	43031370	43028025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030239_43030299_43030435_43030536_43030970_43031109_43031328
m54284U_201205_001509/113575168/ccs	chr6	-	222	1	Intergenic	novelGene_3491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTGAGTCCTTAGCCA	8864	False	NA	NA	False	NA	NA	NA	123253142	123252920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_123252900_123253100
m54284U_201205_001509/113641354/ccs	chr6	-	4182	13	NIC	ENSMUSG00000040669.15	novel	3893	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	609	junction_8	158.200536415722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACACCTACCCTAATCCA	9076	False	NA	-11	True	AATAAA	-14	NA	122316617	122295261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299432_122299966_122300773_122302416_122302910_122309480_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
m54284U_201205_001509/113705176/ccs	chr13	+	1750	7	NIC	ENSMUSG00000021759.15	novel	1598	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	133.866123006864	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTTTGTAGTCAGTTGCAA	9637	False	NA	14	True	AATAAA	-29	NA	112937325	113004428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_112937801_112971392_112971548_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
m54284U_201205_001509/113773147/ccs	chr3	+	176	1	Intergenic	novelGene_1453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGATCTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	85767590	85767766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_85767600_85767800
m54284U_201205_001509/113968975/ccs	chr11	-	3776	18	NIC	ENSMUSG00000020538.16	novel	4299	19	NA	NA	0	-508	intron_retention	FALSE	canonical	3	238	junction_17	63.3457038850469	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTTTTGTTTATCTGG	5316	False	NA	-4	True	ATTAAA	-19	NA	60101218	60090422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60101161
m54284U_201205_001509/113969019/ccs	chr4	+	199	1	Intergenic	novelGene_1946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGGAGGCCAGGCCAG	NA	False	NA	NA	False	NA	NA	NA	99520778	99520977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_99520800_99521000
m54284U_201205_001509/114034569/ccs	chr6	+	178	2	Genic_Genomic	ENSMUSG00000009145.7	novel	3257	12	NA	NA	-68988	-279	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTGGTTTTACG	5293	False	NA	35	True	NA	NA	NA	82965836	83044020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr6_+_82965885_83043890
m54284U_201205_001509/11404066/ccs	chr2	+	187	1	Intergenic	novelGene_640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAACAGGGGCTAACTCTT	NA	False	NA	NA	False	NA	NA	NA	25908932	25909119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_25908900_25909100
m54284U_201205_001509/114100316/ccs	chr7	-	2107	12	NNC	ENSMUSG00000030741.16	novel	2219	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_9	130.234245410667	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTGACTGCTTGTC	NA	False	NA	-6	True	AATAAA	-14	NA	125976622	125969238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973141_125974238_125974376_125975845_125975912_125976008
m54284U_201205_001509/114231970/ccs	chr17	-	175	1	Intergenic	novelGene_8362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAATAATGAGACAAA	NA	False	NA	NA	False	NA	NA	NA	8708729	8708554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_8708600_8708700
m54284U_201205_001509/114360387/ccs	chr8	+	3255	14	NIC	ENSMUSG00000033763.15	novel	4717	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	27.1757375255792	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACAAAGAACTATGTGGG	NA	False	NA	13	True	AATAAA	-14	NA	111448107	111466567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463774_111463853_111464203_111464381_111464561_111464728_111464921
m54284U_201205_001509/114493898/ccs	chr9	+	4143	23	NNC	ENSMUSG00000032267.9	novel	4133	24	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	178.741913069104	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGACCCTTTTTGAAAT	NA	False	NA	20	True	AATAAA	-26	NA	48896684	48953817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48922565_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
m54284U_201205_001509/114558833/ccs	chr11	-	3590	10	NNC	ENSMUSG00000020472.15	novel	4064	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_7	46.9704398768228	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTCTATCCTTGT	NA	False	NA	-1	True	AATAAA	-25	NA	59397046	59376345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_59378641_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394590_59394973_59395081_59396653_59396789_59396989
m54284U_201205_001509/11471067/ccs	chr18	-	173	1	Intergenic	novelGene_9029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77168039	77167866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77167900_77168000
m54284U_201205_001509/114821837/ccs	chr16	-	200	1	Intergenic	novelGene_8058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTACAGAGTCTTTGG	7498	False	NA	NA	False	NA	NA	NA	10998591	10998391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_10998400_10998600
m54284U_201205_001509/114886234/ccs	chr15	+	206	1	Intergenic	novelGene_7617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTAGATGGCCAAAACAT	NA	False	NA	NA	False	NA	NA	NA	8074345	8074551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8074300_8074600
m54284U_201205_001509/114952074/ccs	chr11	-	2184	5	NIC	ENSMUSG00000062825.16	novel	1189	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	5636	junction_3	499.114465829232	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTTCTGGTTTG	NA	False	NA	-22	True	AATAAA	-17	NA	120239315	120236516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120237360_120237462_120237645_120237736_120238702_120238794_120238924_120239250
m54284U_201205_001509/115015822/ccs	chr2	+	1302	4	NIC	ENSMUSG00000026730.13	novel	3571	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	21.1712593442672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGTGTTTTCCACTTAT	4733	False	NA	NA	False	AATAAA	-39	NA	12928872	13006425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_12929010_12985103_12985370_12999560_12999702_13005667
m54284U_201205_001509/115149408/ccs	chr10	+	3618	1	Genic_Genomic	ENSMUSG00000019818.16	novel	NA	NA	NA	NA	8666	1279	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTTTTCTGGTATGTCT	NA	False	NA	NA	False	ATTAAA	-21	NA	41404705	41408323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_+_41404700_41408300
m54284U_201205_001509/115149560/ccs	chr9	-	4272	8	NIC	ENSMUSG00000036986.17	novel	4413	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	130.844197737739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGATTGCAATCTCTA	2204	False	NA	-1	True	AGTAAA	-23	NA	58157016	58125358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_58127848_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
m54284U_201205_001509/115279044/ccs	chr11	-	5053	1	NIC	ENSMUSG00000018481.10	novel	6463	13	NA	NA	42816	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTCCGATTGAATTGTGA	341	False	NA	0	True	AATAAA	-25	NA	85083140	85078087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_85078100_85083100
m54284U_201205_001509/11534488/ccs	chr6	-	4740	22	NNC	ENSMUSG00000063884.7	novel	2666	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	53	junction_3	206.425006834715	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAGCGTGTACAT	3048	False	NA	-1	True	AATAAA	-28	NA	71885734	71857621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_71858216_71858489_71858649_71859171_71861606_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866350_71866573_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
m54284U_201205_001509/115345476/ccs	chr12	-	1416	1	Intergenic	novelGene_6557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAACAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-39	NA	8789110	8787694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_8787700_8789100
m54284U_201205_001509/11536845/ccs	chr3	+	2339	5	NIC	ENSMUSG00000004897.17	novel	2245	6	NA	NA	51	0	intron_retention	FALSE	canonical	3	2720	junction_4	190.603482392112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87813678	87823439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87814022_87820397_87820759_87821358_87821545_87821779_87821998_87822208
m54284U_201205_001509/115410080/ccs	chr12	-	4348	6	NNC	ENSMUSG00000020634.13	novel	965	6	NA	NA	-108	1922	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_3	631.225284664675	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTAGTGATTCACACT	NA	False	NA	1	True	GATAAA	-20	NA	4957547	4927109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_4930772_4933822_4933982_4935720_4935859_4944537_4944680_4952219_4952268_4957348
m54284U_201205_001509/115476020/ccs	chr4	+	2200	16	NIC	ENSMUSG00000029034.10	novel	2368	17	NA	NA	0	136	intron_retention	FALSE	canonical	3	774	junction_2	76.9480055333181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTCCTACTCTC	9981	False	NA	32	True	AATAAA	-20	NA	155954023	155973326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
m54284U_201205_001509/115476590/ccs	chr8	+	2913	1	Genic_Genomic	ENSMUSG00000109674.2	novel	NA	NA	NA	NA	-1471	-9625	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTGAAGTTTCTTATA	NA	False	NA	NA	False	CATAAA	-22	NA	27717242	27720155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_+_27717200_27720200
m54284U_201205_001509/115672502/ccs	chr11	-	3408	6	NNC	ENSMUSG00000020696.19	novel	3489	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	58.48281798956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCCTGTCCCATCTGGT	2743	False	NA	NA	False	AATAAA	-11	NA	82762036	82694647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_82697016_82699338_82699363_82700833_82701045_82703225_82703640_82709241_82709430_82761833
m54284U_201205_001509/115672762/ccs	chr19	+	218	1	Intergenic	novelGene_9216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAATTAATTTTGGGCA	2474	False	NA	NA	False	NA	NA	NA	32668838	32669056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_32668800_32669100
m54284U_201205_001509/115673249/ccs	chr17	-	167	1	Intergenic	novelGene_8463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGTGCGCGCACACACA	NA	False	NA	NA	False	NA	NA	NA	28755669	28755502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_28755500_28755700
m54284U_201205_001509/115736802/ccs	chr4	+	182	1	Intergenic	novelGene_1968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTATTTAGAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	104973567	104973749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_104973600_104973700
m54284U_201205_001509/115738288/ccs	chr7	+	223	1	Intergenic	novelGene_4087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGTTTATTCATTTAT	NA	False	NA	NA	False	TTTAAA	-6	NA	126082902	126083125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_126082900_126083100
m54284U_201205_001509/115802234/ccs	chr7	-	271	1	Intergenic	novelGene_3806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAAACAG	NA	False	NA	NA	False	NA	NA	NA	41564510	41564239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_41564200_41564500
m54284U_201205_001509/115803673/ccs	chr4	+	3521	28	NNC	ENSMUSG00000043411.16	novel	5722	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_6	353.104810019222	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGACTTGAAGGACGTGT	570	False	NA	8	True	AATAAA	-20	NA	137321517	137383642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338004_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
m54284U_201205_001509/115934311/ccs	chr14	-	165	1	Intergenic	novelGene_7438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGATTATCTGTCG	5707	False	NA	NA	False	NA	NA	NA	52232092	52231927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_52231900_52232100
m54284U_201205_001509/115934345/ccs	chr5	-	4198	18	NIC	ENSMUSG00000036553.17	novel	4246	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_9	23.9841354717084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTATCTTCTAGGTGT	NA	False	NA	-6	True	AGTAAA	-14	NA	35897331	35854524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864886_35866988_35867031_35868204_35868339_35871456_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316_35876445_35878873_35878949_35881257_35881489_35897301
m54284U_201205_001509/116329123/ccs	chr11	+	169	1	Intergenic	novelGene_6121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGATGTCAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	82614808	82614977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_82614800_82615000
m54284U_201205_001509/116589927/ccs	chr18	-	3799	6	NNC	ENSMUSG00000036223.17	novel	1256	6	NA	NA	0	-298	intron_retention	FALSE	canonical	3	33	junction_3	177.798087728749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATTTTCAAAACGTAC	6765	False	NA	-19	True	AGTAAA	-16	NA	74340850	74329847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_74330123_74330584_74330755_74332970_74335918_74337334_74337460_74339859_74339956_74340664
m54284U_201205_001509/116655514/ccs	chrX	-	4239	1	NIC	ENSMUSG00000034403.17	novel	3038	3	NA	NA	0	-308	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTGTTGATTCCTTGT	NA	False	NA	NA	False	AATGAA	-20	NA	98514298	98510059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_98510100_98514300
m54284U_201205_001509/11666806/ccs	chr12	-	189	1	FSM	ENSMUSG00000113003.2	ENSMUST00000223213.2	3370	1	3198	-17	3198	17	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGTTGTGATCAGACTG	NA	False	NA	NA	False	NA	NA	NA	99332974	99332785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_99332800_99333000
m54284U_201205_001509/116983178/ccs	chr10	-	3957	11	NNC	ENSMUSG00000035529.11	novel	3877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_1	66.1837593371667	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752790	85727829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_85729302_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387
m54284U_201205_001509/116983241/ccs	chr2	+	247	1	Intergenic	novelGene_660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCTCTGCACATACACACA	NA	False	NA	NA	False	NA	NA	NA	28939884	28940131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_28939900_28940100
m54284U_201205_001509/116983604/ccs	chr11	-	164	1	Intergenic	novelGene_6130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATCTTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	84046622	84046458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_84046500_84046600
m54284U_201205_001509/117114662/ccs	chr10	+	3088	22	NIC	ENSMUSG00000033105.13	novel	4667	22	NA	NA	0	701	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	50.7194944787643	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGCCTTCCTGAGACA	NA	False	NA	6	True	AATAAA	-14	NA	76367421	76389768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_76367456_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
m54284U_201205_001509/117179254/ccs	chr7	-	3981	22	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_21	273.852162311567	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6928	False	NA	0	True	NA	NA	NA	126101586	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101516
m54284U_201205_001509/117310778/ccs	chr1	-	178	1	Intergenic	novelGene_314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTCTTTCCAATTTTAAA	8559	False	NA	NA	False	NA	NA	NA	132359327	132359149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_132359100_132359300
m54284U_201205_001509/117311614/ccs	chr7	-	197	1	Intergenic	novelGene_4123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCAGGAATAAATGCATAA	5206	False	NA	NA	False	NA	NA	NA	130475234	130475037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_130475000_130475200
m54284U_201205_001509/11731830/ccs	chr2	+	2185	14	NIC	ENSMUSG00000005506.17	novel	4678	14	NA	NA	0	-2435	combination_of_known_junctions	FALSE	canonical	3	185	junction_9	161.021958148313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGAGGCTCCTGAACAC	2378	False	NA	NA	False	AATAAA	-27	NA	90770802	90847400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
m54284U_201205_001509/117376607/ccs	chr12	+	205	1	Intergenic	novelGene_6611	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGATACTTAAACCACAA	NA	False	NA	NA	False	NA	NA	NA	31248603	31248808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_31248600_31248800
m54284U_201205_001509/117704464/ccs	chr17	-	185	1	Intergenic	novelGene_8397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAAGATGGCTGACTC	NA	False	NA	NA	False	NA	NA	NA	23868171	23867986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_23868000_23868200
m54284U_201205_001509/11797836/ccs	chr5	-	189	1	Intergenic	novelGene_2846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTAGCCTGTCCATCTG	NA	False	NA	NA	False	NA	NA	NA	121275906	121275717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121275700_121275900
m54284U_201205_001509/118161873/ccs	chr11	+	194	1	Intergenic	novelGene_6041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCTTATGTTCAATTG	NA	False	NA	NA	False	NA	NA	NA	77197376	77197570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77197400_77197600
m54284U_201205_001509/1182048/ccs	chr4	+	173	1	Intergenic	novelGene_2390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATAGATCTTAAAT	NA	False	NA	NA	False	NA	NA	NA	149791440	149791613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149791400_149791600
m54284U_201205_001509/118227083/ccs	chr16	-	2957	14	NIC	ENSMUSG00000022673.6	novel	3589	16	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	1	27	junction_1	389.286815666895	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAATACTTGGTTTAAA	NA	False	NA	-8	True	AATAAA	-8	NA	15455208	15441973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_15442634_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
m54284U_201205_001509/118293928/ccs	chr13	-	7700	26	NNC	ENSMUSG00000049658.14	novel	9921	39	NA	NA	-1077	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_24	12.0083970620562	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTTTGTCCTTTTCA	NA	False	NA	-2	True	AATAAA	-16	NA	100204036	100154503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_100156919_100160107_100160364_100161904_100162161_100163942_100163980_100167292_100167498_100171591_100171779_100172286_100172348_100174267_100174446_100174629_100174781_100177929_100178091_100178567_100178794_100180266_100180360_100180779_100180817_100183233_100183348_100186143_100186538_100187452_100187638_100187855_100188064_100189480_100189627_100191603_100191812_100192666_100192849_100195233_100195454_100195996_100196179_100196801_100198015_100200866_100200998_100202384_100202575_100203972
m54284U_201205_001509/118294177/ccs	chr10	-	4862	14	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_12	102.568839634196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80384898_80386900_80397097
m54284U_201205_001509/118294750/ccs	chr3	-	1909	11	NNC	ENSMUSG00000068739.14	novel	1866	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	812.15377854197	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGGCTTCCCCAGTCTCC	NA	False	NA	-39	True	AATAAA	-18	NA	108352525	108333927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336854_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
m54284U_201205_001509/11862753/ccs	chr9	+	1674	7	NIC	ENSMUSG00000003299.11	novel	1288	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	918	junction_5	64.2668049791043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATGAGCTGGTCAC	NA	False	NA	18	True	AATAAA	-18	NA	20914210	20920127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918837_20918926_20919196_20919789
m54284U_201205_001509/11863627/ccs	chr10	+	220	1	Intergenic	novelGene_5291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAACCTTAGACATACA	NA	False	NA	NA	False	NA	NA	NA	47658790	47659010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_47658800_47659000
m54284U_201205_001509/118751649/ccs	chr3	-	195	1	Intergenic	novelGene_1418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGGGCGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	58954186	58953991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_58954000_58954200
m54284U_201205_001509/118883208/ccs	chr9	+	2858	9	NNC	ENSMUSG00000032349.14	novel	2782	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	242.341152871319	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTCTTCTGTTGTTTG	NA	False	NA	11	True	ATTAAA	-19	NA	77824715	77891801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_77824809_77829157_77829304_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
m54284U_201205_001509/118884026/ccs	chr6	-	2248	3	ISM	ENSMUSG00000055850.13	ENSMUST00000129233.8	789	5	25	-563	0	0	intron_retention	FALSE	canonical	3	28	junction_2	473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTGTGGTTCTGCTGTGT	8475	False	NA	NA	False	TATAAA	-15	NA	72339348	72336696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_72337626_72337857_72337933_72338104
m54284U_201205_001509/118948961/ccs	chr16	-	4490	1	Intergenic	novelGene_8111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGATGCCTAAGAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	17753544	17749054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_17749100_17753500
m54284U_201205_001509/119014635/ccs	chr4	+	4850	15	NIC	ENSMUSG00000028522.17	novel	4703	14	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	47.8825625454441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATACTTGTGTGGTGTCTA	2796	False	NA	12	True	ATTAAA	-13	NA	102971870	103022946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_102972021_102972756_102972858_102975438_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
m54284U_201205_001509/119015942/ccs	chr7	-	143	1	Genic_Genomic	ENSMUSG00000097266.2	novel	NA	NA	NA	NA	2386	18	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCCCCAGT	4907	False	NA	NA	False	NA	NA	NA	19032309	19032166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_-_19032200_19032300
m54284U_201205_001509/119081623/ccs	chr8	-	204	1	Intergenic	novelGene_4411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACCAGATCAGAATGAA	6224	False	NA	NA	False	NA	NA	NA	94911824	94911620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_94911600_94911800
m54284U_201205_001509/119145981/ccs	chr4	+	724	1	Intergenic	novelGene_1942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTAGTATAAACACCTA	NA	False	NA	NA	False	NA	NA	NA	98887508	98888232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_98887500_98888200
m54284U_201205_001509/119146935/ccs	chr17	-	2346	5	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	80	junction_2	3.11247489949718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	2	True	NA	NA	NA	34243626	34240057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34240458_34240656_34242169_34242266_34242428_34243262_34243393_34243483
m54284U_201205_001509/11929680/ccs	chr5	-	163	1	Intergenic	novelGene_2562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGTGAGCAAGCGGAGTT	NA	False	NA	NA	False	NA	NA	NA	37059216	37059053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_37059100_37059200
m54284U_201205_001509/119537758/ccs	chr11	-	192	1	Intergenic	novelGene_6344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAACAATGTGATTGG	NA	False	NA	NA	False	NA	NA	NA	101569289	101569097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_101569100_101569300
m54284U_201205_001509/119933774/ccs	chr12	+	1295	4	Genic_Genomic	ENSMUSG00000113199.2	novel	126	1	NA	NA	-262	14245	multi-exon	FALSE	canonical	3	6	junction_3	5.8878405775519	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTTTCTAATTTTACTG	NA	False	NA	NA	False	NA	NA	NA	18185924	18200557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_+_18186313_18199264_18199392_18199593_18199655_18199838
m54284U_201205_001509/119998952/ccs	chr3	+	200	1	Intergenic	novelGene_1474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGGGTACTGCCAGGCA	6752	False	NA	NA	False	NA	NA	NA	87864760	87864960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_87864800_87865000
m54284U_201205_001509/120391646/ccs	chr2	+	175	1	Intergenic	novelGene_811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGACCCCTTCTTACAA	NA	False	NA	NA	False	NA	NA	NA	60244234	60244409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_60244200_60244400
m54284U_201205_001509/12060509/ccs	chr13	-	231	1	Intergenic	novelGene_6969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAAAGCAAGTGTTCCC	342	False	NA	NA	False	NA	NA	NA	13589786	13589555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_13589600_13589800
m54284U_201205_001509/12060689/ccs	chr1	-	199	1	Intergenic	novelGene_308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATATGCCAGGCAGTG	NA	False	NA	NA	False	NA	NA	NA	131913563	131913364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_131913400_131913600
m54284U_201205_001509/120784735/ccs	chr19	-	4197	17	NNC	ENSMUSG00000074818.14	novel	3161	17	NA	NA	-923	0	intron_retention	TRUE	canonical	0	0	junction_10	6.54670718758675	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTGGTCTGACTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	45035079	45015344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_45016414_45016817_45016919_45017162_45017763_45018178_45018251_45018418_45018511_45018636_45018729_45021450_45021627_45022073_45022125_45024495_45024694_45025169_45025648_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856_45034357_45035013
m54284U_201205_001509/120851095/ccs	chr9	+	193	1	Intergenic	novelGene_5093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACCCAAGGGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	109663771	109663964	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_109663800_109664000
m54284U_201205_001509/120980106/ccs	chr11	-	2186	9	NIC	ENSMUSG00000059796.17	novel	1845	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_8	1484.80613212635	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559375_69559469_69559580_69559903_69560073_69560958_69561574_69561753_69561803_69563104
m54284U_201205_001509/121176183/ccs	chr13	-	184	1	Intergenic	novelGene_7286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTATATGATTCTTAT	NA	False	NA	NA	False	NA	NA	NA	104592760	104592576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_104592600_104592800
m54284U_201205_001509/12124534/ccs	chr7	+	177	1	Intergenic	novelGene_3739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAATTAAAAAAAAAT	1491	False	NA	NA	False	NA	NA	NA	28139082	28139259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28139100_28139300
m54284U_201205_001509/121375112/ccs	chr6	-	196	1	Intergenic	novelGene_3308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGATTA	NA	False	NA	NA	False	NA	NA	NA	67204751	67204555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_67204600_67204800
m54284U_201205_001509/121440383/ccs	chr19	-	177	1	Intergenic	novelGene_9267	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAAAAACCCTCAGCATAG	9780	False	NA	NA	False	NA	NA	NA	42126210	42126033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_42126000_42126200
m54284U_201205_001509/121572120/ccs	chr11	+	204	1	Intergenic	novelGene_6150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTAAGGGGAAAATGTCC	NA	False	NA	NA	False	NA	NA	NA	85935017	85935221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_85935000_85935200
m54284U_201205_001509/121637129/ccs	chr2	-	243	1	Intergenic	novelGene_1230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAAGGCTGGAAATAG	NA	False	NA	NA	False	NA	NA	NA	165768104	165767861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_165767900_165768100
m54284U_201205_001509/121700587/ccs	chr1	-	176	1	Intergenic	novelGene_432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAAGAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	160895595	160895419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_160895400_160895600
m54284U_201205_001509/121963705/ccs	chr11	+	180	1	Intergenic	novelGene_5805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAAAGAAAGAAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	50690592	50690772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_50690600_50690800
m54284U_201205_001509/121964453/ccs	chr14	-	2764	2	Antisense	novelGene_ENSMUSG00000034959.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTTGCCTTAGTCATGGT	NA	False	NA	NA	False	NA	NA	NA	75304596	75283187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_-_75285810_75304454
m54284U_201205_001509/121965043/ccs	chr12	+	109	1	FSM	ENSMUSG00000118868.1	ENSMUST00000240474.1	107	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTCACAGTCAGCTAA	NA	False	NA	NA	False	NA	NA	NA	95586591	95586700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_95586600_95586700
m54284U_201205_001509/122159138/ccs	chrX	+	3282	1	NIC	ENSMUSG00000031262.13	novel	3227	23	NA	NA	0	1186	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCCAGGCGGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	133208903	133212185	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_133208900_133212200
m54284U_201205_001509/122293084/ccs	chr9	-	2261	1	NIC	ENSMUSG00000032366.16	novel	2890	8	NA	NA	0	-7924	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGTAGAGTTGGCCCA	NA	False	NA	NA	False	NA	NA	NA	66951244	66948983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_66949000_66951200
m54284U_201205_001509/122357587/ccs	chr2	+	263	1	Intergenic	novelGene_827	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATACTTATTGCTTTGCTT	NA	False	NA	NA	False	NA	NA	NA	69489254	69489517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_69489300_69489500
m54284U_201205_001509/122423225/ccs	chr2	+	2502	1	FSM	ENSMUSG00000065258.3	ENSMUST00000083324.3	74	1	-444	-1984	-444	1984	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGGTTATTTGGGT	NA	False	NA	6	True	AATATA	-19	NA	26800828	26803330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_26800800_26803300
m54284U_201205_001509/122553405/ccs	chr4	-	190	1	Intergenic	novelGene_2373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGGCTCAGCAGTTA	6903	False	NA	NA	False	NA	NA	NA	148737332	148737142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_148737100_148737300
m54284U_201205_001509/122553886/ccs	chr4	+	1262	7	NNC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_4	406.426602639804	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTGTGTGTGTTCTTAG	787	False	NA	37	True	TATAAA	-19	NA	156028317	156042171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039898_156040018_156040824_156040906_156041537
m54284U_201205_001509/122618031/ccs	chr2	-	191	1	Intergenic	novelGene_728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAAGGA	2514	False	NA	NA	False	NA	NA	NA	32826893	32826702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32826700_32826900
m54284U_201205_001509/122947203/ccs	chr11	-	162	1	Intergenic	novelGene_6291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTAGTTCTTTCTGAA	NA	False	NA	NA	False	NA	NA	NA	97843831	97843669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97843700_97843800
m54284U_201205_001509/123144213/ccs	chr6	-	189	1	Intergenic	novelGene_3406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGACAATGTGCCCCTTCT	9873	False	NA	NA	False	NA	NA	NA	99019026	99018837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_99018800_99019000
m54284U_201205_001509/12323060/ccs	chr16	-	3191	1	Antisense	novelGene_ENSMUSG00000055447.20_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAATGGTCCCCTTGCC	NA	False	NA	NA	False	NA	NA	NA	49731898	49728707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_49728700_49731900
m54284U_201205_001509/123275846/ccs	chr7	+	2698	5	NIC	ENSMUSG00000042606.10	novel	2766	7	NA	NA	0	222	intron_retention	FALSE	canonical	3	200	junction_2	32.889017923921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCATGCCCTGTCTGTCC	1476	False	NA	64	True	AATAAA	-38	NA	126461143	126464312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_126461689_126461771_126462099_126462340_126463423_126463491_126463658_126463734
m54284U_201205_001509/123341551/ccs	chr8	+	224	1	Intergenic	novelGene_4268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTCTTTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-8	NA	34533847	34534071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_34533800_34534100
m54284U_201205_001509/123471996/ccs	chr10	-	190	1	Intergenic	novelGene_5253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATTTCCAAACTTACCA	9153	False	NA	NA	False	NA	NA	NA	34169425	34169235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_34169200_34169400
m54284U_201205_001509/123535631/ccs	chr7	+	2499	14	NNC	ENSMUSG00000018995.13	novel	3778	14	NA	NA	0	524	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	39.0972085445538	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAGTTATTTTTAAA	7358	False	NA	10	True	ATTAAA	-22	NA	96600727	96712703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_96601152_96605150_96605265_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680757_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
m54284U_201205_001509/123537292/ccs	chr9	+	173	1	Intergenic	novelGene_5136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	117287896	117288069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_117287900_117288100
m54284U_201205_001509/123603746/ccs	chr10	-	195	1	Intergenic	novelGene_5263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTAACAACCTACTTC	NA	False	NA	NA	False	NA	NA	NA	39676792	39676597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_39676600_39676800
m54284U_201205_001509/123668111/ccs	chr11	-	3462	7	NNC	ENSMUSG00000049680.18	novel	4208	7	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_6	19.5654173366058	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGAGTTGAATGTATAC	8622	False	NA	-6	True	NA	NA	NA	5691375	5664986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_5665621_5665651_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691347
m54284U_201205_001509/123996144/ccs	chr15	+	229	1	Intergenic	novelGene_7648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAAGGTTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	16198721	16198950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_16198700_16199000
m54284U_201205_001509/124258772/ccs	chr2	+	191	1	Intergenic	novelGene_674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTTATAT	NA	False	NA	NA	False	NA	NA	NA	29945850	29946041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_29945800_29946000
m54284U_201205_001509/124324325/ccs	chr11	-	2310	5	NIC	ENSMUSG00000019590.17	novel	2741	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	74.0303991614256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGCCTTCTGTCTTCAT	NA	False	NA	-4	True	AATAAA	-15	NA	105834965	105824527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_105826394_105827007_105827112_105827380_105827480_105828454_105828667_105834936
m54284U_201205_001509/1246446/ccs	chr11	+	183	1	Intergenic	novelGene_5848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGTTGTCATTTATA	NA	False	NA	NA	False	NA	NA	NA	54770025	54770208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_54770000_54770200
m54284U_201205_001509/124649639/ccs	chr11	-	5018	1	Antisense	novelGene_ENSMUSG00000020299.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTCTTGTCTGCAAAAT	NA	False	NA	NA	False	AATAAA	-23	NA	31932612	31927594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_31927600_31932600
m54284U_201205_001509/124715972/ccs	chr11	-	188	1	Intergenic	novelGene_5944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGAGCTTTCCCTCCCCC	9097	False	NA	NA	False	NA	NA	NA	69386590	69386402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_69386400_69386600
m54284U_201205_001509/124911747/ccs	chr2	+	1020	1	Intergenic	novelGene_998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGTGATGCCTTGATTA	NA	False	NA	11	True	AATAAA	-17	NA	118939079	118940099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_118939100_118940100
m54284U_201205_001509/124977241/ccs	chr9	-	184	1	Intergenic	novelGene_5123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTAAGGCTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	113598105	113597921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_113597900_113598100
m54284U_201205_001509/125305127/ccs	chr18	+	180	1	Intergenic	novelGene_9057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	84925749	84925929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_84925700_84925900
m54284U_201205_001509/125306379/ccs	chr10	+	450	3	NIC	ENSMUSG00000020022.18	novel	566	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	1638.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGTCTTGTGCGTTCA	NA	False	NA	13	True	ATTAAA	-13	NA	94034898	94056810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_94034993_94039149_94039238_94056542
m54284U_201205_001509/125372372/ccs	chr6	-	6576	30	NIC	ENSMUSG00000038252.14	novel	4629	32	NA	NA	51	0	intron_retention	FALSE	canonical	3	436	junction_19	79.8088679923849	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCCTGTCCTGGCTGGTC	3544	False	NA	-9	True	AATAAA	-20	NA	125168515	125144969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
m54284U_201205_001509/125633690/ccs	chr1	-	185	1	Intergenic	novelGene_111	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAAGCCAGGCAGGGA	NA	False	NA	NA	False	NA	NA	NA	45889136	45888951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_45889000_45889100
m54284U_201205_001509/125634027/ccs	chr4	+	175	1	Intergenic	novelGene_2404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	151012987	151013162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_151013000_151013200
m54284U_201205_001509/125698132/ccs	chr2	+	234	1	Intergenic	novelGene_656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	595	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACAACTAGGGAGCCGG	NA	False	NA	NA	False	NA	NA	NA	28495263	28495497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_28495300_28495500
m54284U_201205_001509/12584952/ccs	chr12	-	2553	1	Intergenic	novelGene_6768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCGTGGTTTTGCTTAG	NA	False	NA	NA	False	NA	NA	NA	81091966	81089413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_81089400_81092000
m54284U_201205_001509/125896595/ccs	chr7	-	3525	10	NIC	ENSMUSG00000030521.12	novel	2248	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	635	junction_4	65.0067422903954	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACGGGCTTATTTCATC	NA	False	NA	-3	True	NA	NA	NA	64041984	64026274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
m54284U_201205_001509/125896667/ccs	chr2	+	1709	8	NIC	ENSMUSG00000039041.16	novel	1535	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1931	junction_6	158.026605871497	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGTCTGGGCCTGTGTT	NA	False	NA	2	True	AATAAA	-22	NA	179813406	179818079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817750_179817866
m54284U_201205_001509/125960581/ccs	chr2	+	3403	1	Genic_Genomic	ENSMUSG00000087377.2	novel	NA	NA	NA	NA	-546	-5120	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGAGAATTTTCTTT	-1	True	NA	NA	False	NA	NA	NA	132094730	132098133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_132094700_132098100
m54284U_201205_001509/126027475/ccs	chr4	-	173	1	Intergenic	novelGene_1762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATTTTA	NA	False	NA	NA	False	NA	NA	NA	19850595	19850422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_19850400_19850600
m54284U_201205_001509/126158507/ccs	chr12	+	2350	7	NIC	ENSMUSG00000057469.9	novel	2362	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_6	88.3712182909245	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7396	False	NA	4	True	ATTAAA	-15	NA	16860963	16876753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_16861317_16863847_16863914_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16875365
m54284U_201205_001509/126354738/ccs	chr15	+	179	1	Intergenic	novelGene_7616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAATACTTCAAGT	NA	False	NA	NA	False	NA	NA	NA	8050537	8050716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8050500_8050700
m54284U_201205_001509/126551661/ccs	chr16	-	6388	1	Intergenic	novelGene_8269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATTATCCATAAGTTC	NA	False	NA	NA	False	NA	NA	NA	46802400	46796012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_46796000_46802400
m54284U_201205_001509/126617150/ccs	chr18	+	2853	21	NIC	ENSMUSG00000024231.16	novel	3727	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	255.234774276547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAAAAAAAAAAAAAAT	-35	True	NA	72	True	ATTAAA	-28	NA	3382987	3435385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_3383173_3399845_3399987_3405686_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
m54284U_201205_001509/126813771/ccs	chr15	-	3939	21	NNC	ENSMUSG00000033762.9	novel	3896	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_9	20.2136092769203	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTTCTGGTAACATAG	NA	False	NA	-5	True	AATAAA	-19	NA	76594748	76587752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589644_76589793_76590057_76590145_76590288_76590358_76590493_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
m54284U_201205_001509/126814468/ccs	chr7	-	188	1	Intergenic	novelGene_4158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTACTATCTTCTACAT	NA	False	NA	NA	False	NA	NA	NA	140634358	140634170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_140634200_140634400
m54284U_201205_001509/127011598/ccs	chr7	-	2649	1	Intergenic	novelGene_3938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82360816	82358167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_82358200_82360800
m54284U_201205_001509/127272208/ccs	chr15	-	1703	8	NIC	ENSMUSG00000055762.17	novel	2842	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	1106.37850112658	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACCACCTGCCTCTGC	NA	False	NA	NA	False	NA	NA	NA	75781405	75766648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781308
m54284U_201205_001509/127599630/ccs	chr7	+	3125	1	Antisense	novelGene_ENSMUSG00000034875.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCATTGAGTTTACTCAA	NA	False	NA	NA	False	ATTAAA	-12	NA	35250528	35253653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_35250500_35253700
m54284U_201205_001509/127600365/ccs	chr13	-	2715	15	NIC	ENSMUSG00000021546.19	novel	2970	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_14	2416.58227309832	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGTTTTGTGTGTGTGTG	5697	False	NA	-8	True	AATACA	-15	NA	58549384	58538955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58546969_58547027_58547706_58547805_58548146_58548232_58549348
m54284U_201205_001509/127600394/ccs	chr16	-	3654	1	NIC	ENSMUSG00000022674.16	novel	1042	6	NA	NA	38478	-264	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAATGAAGACCATT	NA	False	NA	NA	False	AATAAA	-19	NA	15373858	15370204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_15370200_15373900
m54284U_201205_001509/127601026/ccs	chr4	+	191	1	Intergenic	novelGene_2135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACCAAAGTAGGAAGAAA	NA	False	NA	NA	False	NA	NA	NA	128006107	128006298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_128006100_128006300
m54284U_201205_001509/127731575/ccs	chr7	-	183	1	Intergenic	novelGene_3905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGAGTGCCAAT	NA	False	NA	NA	False	NA	NA	NA	79641216	79641033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79641000_79641200
m54284U_201205_001509/127797604/ccs	chr12	+	201	1	Intergenic	novelGene_6616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTACATGGAGCAAGTA	NA	False	NA	NA	False	NA	NA	NA	31801738	31801939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_31801700_31801900
m54284U_201205_001509/12781510/ccs	chr9	+	182	1	Intergenic	novelGene_4981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAATCGTGCTTATCA	NA	False	NA	NA	False	NA	NA	NA	83473475	83473657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_83473500_83473700
m54284U_201205_001509/127926469/ccs	chr17	+	183	1	Intergenic	novelGene_8726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATATCTCCATA	NA	False	NA	NA	False	NA	NA	NA	74791577	74791760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_74791600_74791800
m54284U_201205_001509/128060148/ccs	chr2	+	2480	4	NNC	ENSMUSG00000027654.3	novel	2266	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	130.561181911862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGATTCTTTTTGTT	406	False	NA	8	True	AATAAA	-16	NA	158610012	158628557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_158610508_158621764_158622147_158625052_158625178_158627079
m54284U_201205_001509/128452221/ccs	chr4	-	2658	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	0	-2055	intron_retention	FALSE	canonical	3	279	junction_9	29.6048044148994	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGGGATACTCTAGCA	7947	False	NA	-16	True	ATTAAA	-15	NA	129534771	129521930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
m54284U_201205_001509/12847425/ccs	chr2	-	1629	3	NIC	ENSMUSG00000036752.5	novel	1598	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1369	junction_2	18.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGCCTGTCCAATTCCT	NA	False	NA	-24	True	ATTAAA	-18	NA	25114666	25112171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25113381_25113945_25114245_25114545
m54284U_201205_001509/128715070/ccs	chr11	+	3072	8	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	65	0	intron_retention	FALSE	canonical	3	1074	junction_6	56.3882315120915	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1700	False	NA	18	True	ATTAAA	-15	NA	78403083	78413562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78410132_78411977_78412058_78412619
m54284U_201205_001509/128846549/ccs	chr11	-	191	1	Intergenic	novelGene_5922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTTAAGAATGACTGT	NA	False	NA	NA	False	NA	NA	NA	68072782	68072591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68072600_68072800
m54284U_201205_001509/128974932/ccs	chr8	-	3020	14	NIC	ENSMUSG00000031605.9	novel	5126	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_13	60.0582557425724	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTTTTACCAGTGTG	NA	False	NA	-2	True	AATAAA	-28	NA	65302576	65192881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65302284
m54284U_201205_001509/129040634/ccs	chr2	-	189	1	Intergenic	novelGene_590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGGATCGGAGACTATTG	NA	False	NA	NA	False	NA	NA	NA	10036476	10036287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_10036300_10036500
m54284U_201205_001509/129106133/ccs	chr19	-	4278	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	1	2704	0	-2700	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTAGAAGGCTGTCTC	4062	False	NA	NA	False	AATAAA	-21	NA	5852699	5848421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5848400_5852700
m54284U_201205_001509/129108182/ccs	chr18	-	1585	13	NNC	ENSMUSG00000025420.14	novel	2039	17	NA	NA	14089	-858	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	8.26093551333961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTGTCAGACTTTA	NA	False	NA	NA	False	NA	NA	NA	77120850	77081752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr18_-_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77103697_77103741_77105156_77105324_77106880_77106952_77120759
m54284U_201205_001509/129108604/ccs	chr4	-	3039	1	Intergenic	novelGene_2321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGGTCTGTGGTGTTC	NA	False	NA	NA	False	NA	NA	NA	143713616	143710577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_143710600_143713600
m54284U_201205_001509/129370029/ccs	chr8	+	2624	12	NIC	ENSMUSG00000038482.12	novel	2682	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	421.709939089978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTTTCTGTAACTC	2143	False	NA	94	True	AATAAA	-24	NA	13388790	13428448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13388921_13389664_13389740_13415088_13415196_13419458_13419581_13420168_13420275_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
m54284U_201205_001509/129370133/ccs	chr18	-	181	1	Intergenic	novelGene_8861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTAAATTACAAACCTC	NA	False	NA	NA	False	NA	NA	NA	33916465	33916284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_33916300_33916500
m54284U_201205_001509/129630278/ccs	chr2	-	174	1	Intergenic	novelGene_801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAAAATTTTTTG	NA	False	NA	NA	False	NA	NA	NA	58507129	58506955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_58507000_58507100
m54284U_201205_001509/129698071/ccs	chr5	-	173	1	Intergenic	novelGene_2624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAGACAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	76553821	76553648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_76553600_76553800
m54284U_201205_001509/129828431/ccs	chr11	-	2633	1	NIC	ENSMUSG00000006057.16	novel	4715	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTGCCTGTGCCTGTC	3530	False	NA	-6	True	NA	NA	NA	95966445	95963812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_95963800_95966400
m54284U_201205_001509/129828693/ccs	chr14	+	167	1	Intergenic	novelGene_7600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAACAAAAAACAAAG	NA	False	NA	NA	False	NA	NA	NA	121083060	121083227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_121083100_121083200
m54284U_201205_001509/129892725/ccs	chr3	-	171	1	Intergenic	novelGene_1492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	88586695	88586524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88586500_88586700
m54284U_201205_001509/129959583/ccs	chr5	-	2368	16	NIC	ENSMUSG00000029472.14	novel	2404	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	131	junction_5	527.841727119872	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTCTGAAGTGGGTTT	NA	False	NA	-27	True	AATAAA	-12	NA	122959357	122925793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
m54284U_201205_001509/130222192/ccs	chrX	-	173	1	Intergenic	novelGene_9451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAATTCTTAG	NA	False	NA	NA	False	NA	NA	NA	47724649	47724476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_47724500_47724600
m54284U_201205_001509/130549484/ccs	chr9	-	2036	7	NNC	ENSMUSG00000032494.13	novel	1290	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_5	2127.4897114257	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGTAGTGCCTTATTTC	NA	False	NA	-15	True	AGTAAA	-21	NA	110775162	110768670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_110769888_110771396_110771507_110771597_110771713_110772219_110772322_110772754_110772923_110773258_110773312_110774891
m54284U_201205_001509/130615091/ccs	chr1	+	3404	17	NNC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	0	0	intron_retention	TRUE	canonical	2	6	junction_8	64.7815741067628	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	7288	False	NA	23	True	AATAAA	-32	NA	87683777	87720150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87703925_87704056_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
m54284U_201205_001509/130744486/ccs	chr8	+	174	1	Intergenic	novelGene_4581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAAAAATGGCTGTACT	NA	False	NA	NA	False	NA	NA	NA	124046495	124046669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_124046500_124046700
m54284U_201205_001509/130943740/ccs	chr1	+	176	1	Intergenic	novelGene_395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAGATTTTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	154897345	154897521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_154897300_154897500
m54284U_201205_001509/1311708/ccs	chr11	+	188	1	Intergenic	novelGene_6345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGTGAATAGGGCA	NA	False	NA	NA	False	NA	NA	NA	101573124	101573312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101573100_101573300
m54284U_201205_001509/131204194/ccs	chr5	-	175	1	Intergenic	novelGene_2902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAAAAAAACCCTTCTAT	NA	False	NA	NA	False	NA	NA	NA	124582000	124581825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124581800_124582000
m54284U_201205_001509/131204216/ccs	chr7	+	197	1	Intergenic	novelGene_3615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATATATATAT	NA	False	NA	NA	False	NA	NA	NA	3327542	3327739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3327500_3327700
m54284U_201205_001509/131205187/ccs	chr19	+	720	5	NNC	ENSMUSG00000071653.10	novel	500	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	1620.00408950101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGATGAAGTGCAGCAGGG	NA	False	NA	32	True	AATAAA	-21	NA	8866262	8868110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_8866329_8866487_8866613_8866996_8867092_8867366_8867465_8867774
m54284U_201205_001509/131270575/ccs	chr17	+	2533	6	NNC	ENSMUSG00000040771.15	novel	1324	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_5	348.298377831422	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	False	NA	21	True	AATAAA	-29	NA	48717041	48724294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48723559_48723711
m54284U_201205_001509/131402121/ccs	chr11	-	1357	7	NIC	ENSMUSG00000034449.8	novel	1254	7	NA	NA	0	129	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	15.7585955380971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACCTTCAGAAGTATC	NA	False	NA	NA	False	ATTAAA	-18	NA	84719820	84711552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716348_84719576
m54284U_201205_001509/131465257/ccs	chr4	+	181	1	Intergenic	novelGene_2035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATAAATCTTA	1601	False	NA	NA	False	NA	NA	NA	116722673	116722854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116722700_116722900
m54284U_201205_001509/131521/ccs	chr15	+	179	1	Intergenic	novelGene_8009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATCCTAGCACTCTGAAG	8842	False	NA	NA	False	NA	NA	NA	102374073	102374252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_102374100_102374300
m54284U_201205_001509/131598212/ccs	chr17	-	5450	1	Intergenic	novelGene_8354	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	6848643	6843193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_6843200_6848600
m54284U_201205_001509/131662133/ccs	chr14	-	195	1	Intergenic	novelGene_7362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGAGGAGGGGC	NA	False	NA	NA	False	NA	NA	NA	26049635	26049440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26049400_26049600
m54284U_201205_001509/131664306/ccs	chr8	-	2166	10	NNC	ENSMUSG00000031729.7	novel	2304	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	197.709538789597	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTAGTGTTGGTCAAA	NA	False	NA	-17	True	AATAAA	-16	NA	110419892	110397960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_110399274_110402007_110402057_110403389_110403483_110404251_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
m54284U_201205_001509/131664633/ccs	chr10	-	3509	9	NIC	ENSMUSG00000025417.9	novel	3307	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	316	junction_2	45.549423706563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGAAGTTTTTGTTTT	NA	False	NA	-4	True	AATAAA	-23	NA	127047454	127032935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_127035014_127035181_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
m54284U_201205_001509/131729634/ccs	chr7	-	219	1	Intergenic	novelGene_3784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATTTGGGGCTGGAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	33854988	33854769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_33854800_33855000
m54284U_201205_001509/131729724/ccs	chr17	+	581	1	FSM	ENSMUSG00000062619.7	ENSMUST00000071430.7	762	1	181	0	181	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAACTTGGCAGTCGTT	NA	False	NA	10	True	GATAAA	-18	NA	47083741	47084322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_+_47083700_47084300
m54284U_201205_001509/131859504/ccs	chr9	-	198	1	Intergenic	novelGene_4902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTCCGAGTTTTTAGG	8198	False	NA	NA	False	NA	NA	NA	66839476	66839278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66839300_66839500
m54284U_201205_001509/131925297/ccs	chr9	+	179	1	Intergenic	novelGene_5106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTTATTTCATGTAT	4561	False	NA	NA	False	NA	NA	NA	110049995	110050174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_110050000_110050200
m54284U_201205_001509/132188160/ccs	chr4	+	3606	18	NIC	ENSMUSG00000000085.17	novel	3353	17	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_4	22.223308316404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTCTTTTTAACCAGTT	NA	False	NA	14	True	AATAAA	-16	NA	120262477	120387383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120313481_120313707_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
m54284U_201205_001509/132382886/ccs	chr9	-	1866	1	FSM	ENSMUSG00000119666.1	ENSMUST00000240226.1	72	1	-1317	-477	-1317	477	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTCAATTCTTTTTG	NA	False	NA	-9	True	AATAAA	-38	NA	88404970	88403104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_88403100_88405000
m54284U_201205_001509/132448447/ccs	chr4	-	3525	25	NNC	ENSMUSG00000041058.16	novel	6440	25	NA	NA	-174	-1700	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_19	52.9255077916122	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAATTTGCTTTGCCTT	9	False	NA	-5	True	ATTAAA	-25	NA	19709167	19611372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662030_19662121_19662260_19672418_19672528_19673155_19673295_19678344_19678436_19687790_19687887_19708838
m54284U_201205_001509/132516101/ccs	chr7	+	3028	1	Antisense	novelGene_ENSMUSG00000025724.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTTTTCAAACAGATACA	NA	False	NA	NA	False	NA	NA	NA	80576204	80579232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_80576200_80579200
m54284U_201205_001509/132713002/ccs	chr8	-	148	1	Intergenic	novelGene_4591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCACATATAATAAATAAAC	NA	False	NA	NA	False	NA	NA	NA	124570806	124570658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124570700_124570800
m54284U_201205_001509/133433630/ccs	chr5	+	182	1	Intergenic	novelGene_2660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAAGTTCACTGA	NA	False	NA	NA	False	NA	NA	NA	92163671	92163853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92163700_92163900
m54284U_201205_001509/133629066/ccs	chr3	+	1057	1	Intergenic	novelGene_1548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGCCTCCTCCCCATCTC	NA	False	NA	NA	False	NA	NA	NA	93307597	93308654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_93307600_93308700
m54284U_201205_001509/133629111/ccs	chr8	+	5306	23	NIC	ENSMUSG00000025812.19	novel	3204	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_15	36.9285942648805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	False	NA	13	True	AATAAA	-21	NA	128026092	128338767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_128026285_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912
m54284U_201205_001509/133694972/ccs	chr7	+	175	1	Intergenic	novelGene_3732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATCACCAACAGAG	4970	False	NA	NA	False	NA	NA	NA	27865573	27865748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_27865600_27865700
m54284U_201205_001509/133696301/ccs	chr14	-	1737	6	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	258	junction_5	224.377717253742	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168313	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_51165495_51166277_51166369_51166462_51166765_51167040_51167148_51167590_51167782_51168090
m54284U_201205_001509/13370641/ccs	chr14	-	189	1	Intergenic	novelGene_7535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGGTGTATGCACTAC	NA	False	NA	NA	False	NA	NA	NA	71008523	71008334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_71008300_71008500
m54284U_201205_001509/133761316/ccs	chr5	-	182	1	Intergenic	novelGene_3077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTAAAACGTACAGA	NA	False	NA	NA	False	NA	NA	NA	147700947	147700765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_147700800_147700900
m54284U_201205_001509/133826034/ccs	chrX	+	195	1	Intergenic	novelGene_9386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATACACTGGGACTCAC	NA	False	NA	NA	False	NA	NA	NA	12513532	12513727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_12513500_12513700
m54284U_201205_001509/133890296/ccs	chr15	+	1815	13	NIC	ENSMUSG00000022407.11	novel	3711	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	289.744379678978	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAACAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	80832704	80853320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_80832847_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
m54284U_201205_001509/133892824/ccs	chr4	+	177	1	Intergenic	novelGene_2127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	126912754	126912931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126912800_126912900
m54284U_201205_001509/133958215/ccs	chrX	+	3784	1	NIC	ENSMUSG00000002014.13	novel	800	6	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGTACATTCAAGACAC	5432	False	NA	33	True	AATAAA	-15	NA	72830633	72834417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_72830600_72834400
m54284U_201205_001509/134021122/ccs	chr5	-	242	1	Intergenic	novelGene_2570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTATCTTTACTATCAT	NA	False	NA	NA	False	NA	NA	NA	50610734	50610492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_50610500_50610700
m54284U_201205_001509/134217737/ccs	chrX	-	1789	11	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	205	junction_8	484.868229522207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830380
m54284U_201205_001509/134219091/ccs	chr19	-	206	1	Intergenic	novelGene_9130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTTTACAGGACTGGGC	9266	False	NA	NA	False	AAAACA	-8	NA	6986794	6986588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_6986600_6986800
m54284U_201205_001509/134285208/ccs	chr12	+	8020	28	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	33.7104999252847	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTTTCTTTAGCATGA	NA	False	NA	7	True	AATAAA	-15	NA	4967406	5097394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_4967922_4987389_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024280_5028452_5028589_5040871_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
m54284U_201205_001509/13435937/ccs	chr15	+	157	1	Intergenic	novelGene_7830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	80921342	80921499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_80921300_80921500
m54284U_201205_001509/13436253/ccs	chr10	-	1810	1	Intergenic	novelGene_5237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25303621	25301811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_25301800_25303600
m54284U_201205_001509/135202683/ccs	chr11	-	1931	1	Antisense	novelGene_ENSMUSG00000065734.3_AS_novelGene_ENSMUSG00000077457.3_AS_novelGene_ENSMUSG00000086841.2_AS_novelGene_ENSMUSG00000064437.4_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACGGCGCGTGAGCGCC	NA	False	NA	NA	False	NA	NA	NA	62495633	62493702	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_62493700_62495600
m54284U_201205_001509/135333415/ccs	chr9	-	197	1	Intergenic	novelGene_4668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTATGGGTGTTTTG	5597	False	NA	NA	False	NA	NA	NA	21804327	21804130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21804100_21804300
m54284U_201205_001509/135400240/ccs	chr2	+	231	1	Intergenic	novelGene_1173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTACTTGTTTTGCTCTTC	NA	False	NA	NA	False	TATAAA	-29	NA	156001910	156002141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_156001900_156002100
m54284U_201205_001509/135464068/ccs	chr4	+	6345	1	NIC	ENSMUSG00000043411.16	novel	619	4	NA	NA	0	-5336	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAAAAGG	591	False	NA	NA	False	NA	NA	NA	137321538	137327883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_137321500_137327900
m54284U_201205_001509/135464185/ccs	chr8	+	180	1	Intergenic	novelGene_4350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAACAAAGATTAAA	4412	False	NA	NA	False	NA	NA	NA	78217743	78217923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_78217700_78217900
m54284U_201205_001509/135594371/ccs	chr14	+	178	1	Intergenic	novelGene_7418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATTTTAAAAAATCTG	NA	False	NA	NA	False	NA	NA	NA	47028748	47028926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_47028700_47028900
m54284U_201205_001509/136055130/ccs	chr14	+	174	1	Intergenic	novelGene_7564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTGATCTGCACT	NA	False	NA	NA	False	NA	NA	NA	81881953	81882127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_81882000_81882100
m54284U_201205_001509/136317068/ccs	chrX	-	172	1	Intergenic	novelGene_9473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAATGGTACTCATTAA	NA	False	NA	NA	False	NA	NA	NA	56425084	56424912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_56424900_56425100
m54284U_201205_001509/136446668/ccs	chr5	-	3579	5	NIC	ENSMUSG00000055725.12	novel	1375	7	NA	NA	0	2667	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	77.2702238899306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCCTGCCTTCTTTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	97259455	97241123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97259117
m54284U_201205_001509/136578563/ccs	chr5	+	199	1	Intergenic	novelGene_2601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAGAGGAAGAGAAACAC	NA	False	NA	NA	False	NA	NA	NA	66420454	66420653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_66420500_66420700
m54284U_201205_001509/136710190/ccs	chr11	+	2927	9	NIC	ENSMUSG00000001100.11	novel	2054	11	NA	NA	70	0	intron_retention	FALSE	canonical	3	1074	junction_7	54.2448154204621	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGTATTGTTCTTAA	1705	False	NA	18	True	ATTAAA	-15	NA	78403088	78413562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78410132_78411977_78412058_78412619
m54284U_201205_001509/136840210/ccs	chr11	+	6246	22	NIC	ENSMUSG00000011256.17	novel	6383	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_2	107.666845685494	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTCTGTTTGGATGGCT	NA	False	NA	15	True	ATTAAA	-20	NA	45946884	46038170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_45947038_45951749_45951836_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
m54284U_201205_001509/136841823/ccs	chr7	+	180	1	Intergenic	novelGene_3753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTATTAAAAAATATGTAA	122	False	NA	NA	False	NA	NA	NA	28832507	28832687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28832500_28832700
m54284U_201205_001509/136905295/ccs	chr6	+	188	1	Intergenic	novelGene_3295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGGTCCTTGGTGCCTC	NA	False	NA	NA	False	NA	NA	NA	59338440	59338628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_59338400_59338600
m54284U_201205_001509/13698186/ccs	chr3	-	710	6	NIC	ENSMUSG00000092607.10	novel	1054	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_2	146.199042404525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGAGTCCGGTTCCTTG	1310	False	NA	-23	True	AATAAA	-28	NA	95041250	95037029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_95037195_95037474_95037670_95040327_95040423_95040510_95040600_95040868_95040940_95041155
m54284U_201205_001509/137234910/ccs	chr16	-	3469	16	NNC	ENSMUSG00000022536.15	novel	3292	16	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	59	junction_4	290.589439281992	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	8116	False	NA	-8	True	AATAAA	-13	NA	4867721	4831772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4837953_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
m54284U_201205_001509/137299936/ccs	chr11	-	1788	12	NNC	ENSMUSG00000020692.15	novel	1783	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_4	95.7633101466732	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGCAGCTTCTTGT	8303	False	NA	-10	True	AATAAA	-18	NA	82799237	82791597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_82791877_82792382_82792695_82793820_82793957_82794915_82794958_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
m54284U_201205_001509/137364756/ccs	chr7	-	1826	15	NNC	ENSMUSG00000003868.15	novel	1834	15	NA	NA	0	0	intron_retention	FALSE	canonical	1	62	junction_6	635.19341422073	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCTGTGTCCTCAGA	9182	False	NA	-3	True	TATAAA	-16	NA	45084047	45071320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073793_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
m54284U_201205_001509/13764173/ccs	chr12	-	190	1	Intergenic	novelGene_6850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATTACCTCATGATTTT	NA	False	NA	NA	False	NA	NA	NA	100760198	100760008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_100760000_100760200
m54284U_201205_001509/137691235/ccs	chr4	-	204	1	Intergenic	novelGene_1900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCTTGTAATAAACCTAAA	NA	False	NA	NA	False	NA	NA	NA	70952558	70952354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_70952400_70952600
m54284U_201205_001509/1377711/ccs	chr16	+	187	1	Intergenic	novelGene_8068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCGTAGCCTAGTCAAAAC	NA	False	NA	NA	False	NA	NA	NA	13460253	13460440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13460300_13460400
m54284U_201205_001509/137824161/ccs	chr3	+	353	1	Intergenic	novelGene_1584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGCCTCCACCTCCA	NA	False	NA	NA	False	NA	NA	NA	96312620	96312973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_96312600_96313000
m54284U_201205_001509/137824437/ccs	chr13	-	168	1	Intergenic	novelGene_7207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAAGAAAGCTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	74376618	74376450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_74376400_74376600
m54284U_201205_001509/137955511/ccs	chr8	+	177	1	Intergenic	novelGene_4261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGTGTTAATTTTATAG	NA	False	NA	NA	False	NA	NA	NA	34311320	34311497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_34311300_34311500
m54284U_201205_001509/138085497/ccs	chrX	+	173	1	Intergenic	novelGene_9602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAGACACACAGTAAA	NA	False	NA	NA	False	NA	NA	NA	105061344	105061517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_105061300_105061500
m54284U_201205_001509/138085755/ccs	chr7	-	3592	1	Antisense	novelGene_ENSMUSG00000030505.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTGTTACTTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	49434317	49430725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_49430700_49434300
m54284U_201205_001509/138348579/ccs	chr13	+	180	1	Intergenic	novelGene_7073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGAGCTCATTA	NA	False	NA	NA	False	NA	NA	NA	51939757	51939937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_51939800_51939900
m54284U_201205_001509/138610260/ccs	chr8	-	212	1	Intergenic	novelGene_4253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAGTAACAACAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	28367717	28367505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_28367500_28367700
m54284U_201205_001509/138805619/ccs	chr14	+	175	1	Intergenic	novelGene_7344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTTAAGG	NA	False	NA	NA	False	NA	NA	NA	20022975	20023150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_20023000_20023200
m54284U_201205_001509/138871415/ccs	chr14	-	2338	15	NNC	ENSMUSG00000021948.18	novel	2139	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_14	30.3758765725538	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGCTGTGGGGACATT	423	False	NA	-5	True	AATAAA	-15	NA	30329779	30317312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329601
m54284U_201205_001509/138938048/ccs	chr9	-	718	1	FSM	ENSMUSG00000061167.10	ENSMUST00000088480.4	615	1	-37	-66	-37	66	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTGTAACATATTTAGA	NA	False	NA	NA	False	AATAAA	-32	NA	22097554	22096836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_22096800_22097600
m54284U_201205_001509/139134543/ccs	chr9	+	176	1	Intergenic	novelGene_4982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACACATCTGTTTA	NA	False	NA	NA	False	NA	NA	NA	83883533	83883709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_83883500_83883700
m54284U_201205_001509/139200920/ccs	chr5	-	195	1	Intergenic	novelGene_2852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAACTACAAACACTAAAC	NA	False	NA	NA	False	NA	NA	NA	121488935	121488740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121488700_121488900
m54284U_201205_001509/139329699/ccs	chr4	+	190	1	Intergenic	novelGene_1828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAGCATAGGTAAAATA	NA	False	NA	NA	False	NA	NA	NA	43432672	43432862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_43432700_43432900
m54284U_201205_001509/139397210/ccs	chr9	+	185	1	FSM	ENSMUSG00000102330.2	ENSMUST00000193259.2	1441	1	-139	1395	-139	-1395	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGGGGACTAGAGGGCA	NA	False	NA	NA	False	NA	NA	NA	72796187	72796372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_72796200_72796400
m54284U_201205_001509/139526355/ccs	chr8	-	1048	7	NIC	ENSMUSG00000031546.7	novel	1349	8	NA	NA	0	-210	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	242.691676824732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACTACTTACTGAG	NA	False	NA	-1	True	AATAAA	-26	NA	23727675	23716841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_23717192_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
m54284U_201205_001509/139594501/ccs	chr11	-	2164	5	NNC	ENSMUSG00000018405.8	novel	2477	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	41.1035278291292	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGGAGTTGATTTGT	NA	False	NA	-4	True	AATAAA	-23	NA	84710341	84703886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709975
m54284U_201205_001509/13959513/ccs	chrX	-	193	1	Intergenic	novelGene_9642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAATGGCATCATG	NA	False	NA	NA	False	NA	NA	NA	136075154	136074961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_136075000_136075200
m54284U_201205_001509/139657350/ccs	chr2	+	184	1	Genic_Genomic	ENSMUSG00000074793.11	novel	NA	NA	NA	NA	9660	1	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATCATGGGACA	NA	False	NA	NA	False	NA	NA	NA	130979073	130979257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_130979100_130979300
m54284U_201205_001509/139855303/ccs	chr3	-	176	1	Intergenic	novelGene_1655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAATTTACGTTGCTAA	NA	False	NA	NA	False	NA	NA	NA	121332420	121332244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_121332200_121332400
m54284U_201205_001509/139985015/ccs	chr8	-	2075	1	Intergenic	novelGene_4456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	106851822	106849747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106849700_106851800
m54284U_201205_001509/139986253/ccs	chr7	-	3890	24	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_2	304.5539612481	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9414	False	NA	0	True	NA	NA	NA	126102609	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091620_126091658_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201205_001509/140511970/ccs	chr4	-	3825	18	NNC	ENSMUSG00000028809.17	novel	3740	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_10	451.664403693731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATTGCCACTCACAT	NA	False	NA	-7	True	AATAAA	-12	NA	135080555	135047801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067916_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135073626_135073757_135074045_135074169_135074425_135074516_135080407
m54284U_201205_001509/14091529/ccs	chr19	-	189	1	Intergenic	novelGene_9219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACCAAAAAAAAGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	32713810	32713621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_32713600_32713800
m54284U_201205_001509/14092750/ccs	chr18	-	186	1	Intergenic	novelGene_8898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGGCAGTCTCTTCTC	NA	False	NA	NA	False	NA	NA	NA	35865281	35865095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35865100_35865300
m54284U_201205_001509/141101088/ccs	chr4	+	214	1	Intergenic	novelGene_1930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCATGGAGCAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	87451928	87452142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_87451900_87452100
m54284U_201205_001509/141295725/ccs	chr2	-	444	1	Intergenic	novelGene_780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCTGATAAGACAGCAAAT	NA	False	NA	NA	False	NA	NA	NA	40413049	40412605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_40412600_40413000
m54284U_201205_001509/141495106/ccs	chrX	+	143	1	Intergenic	novelGene_9437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	40423407	40423550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_40423400_40423600
m54284U_201205_001509/141623869/ccs	chr2	-	196	1	Intergenic	novelGene_675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAGTAAATAAATACAT	NA	False	NA	NA	False	NA	NA	NA	29949892	29949696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29949700_29949900
m54284U_201205_001509/141690339/ccs	chr8	+	3992	8	NIC	ENSMUSG00000013878.19	novel	741	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	26.1799112890407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAATGTGTTATGTTT	NA	False	NA	7	True	AATAAA	-17	NA	26609691	26633899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_26609988_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
m54284U_201205_001509/141755641/ccs	chr7	-	153	1	Intergenic	novelGene_3925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	80657922	80657769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_80657800_80657900
m54284U_201205_001509/141886077/ccs	chr1	-	177	1	Intergenic	novelGene_460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACTTCAAAAGTTAAGC	NA	False	NA	NA	False	NA	NA	NA	167173735	167173558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_167173600_167173700
m54284U_201205_001509/142018647/ccs	chr9	-	160	1	Intergenic	novelGene_4775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATCTAAA	2321	False	NA	NA	False	NA	NA	NA	54644903	54644743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_54644700_54644900
m54284U_201205_001509/142084731/ccs	chr17	-	203	1	Intergenic	novelGene_8624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGGAGTTACAGCTGG	NA	False	NA	NA	False	NA	NA	NA	47315138	47314935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_47314900_47315100
m54284U_201205_001509/142215829/ccs	chr18	-	196	1	Intergenic	novelGene_8876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAACCAACCAACCAAAAAC	NA	False	NA	NA	False	NA	NA	NA	34957153	34956957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34957000_34957200
m54284U_201205_001509/14221981/ccs	chr8	-	2935	19	NIC	ENSMUSG00000002885.15	novel	2867	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_18	48.6081903884469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCACGTTTGCTGGTGA	NA	False	NA	-11	True	ATTAAA	-19	NA	84467812	84449992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84461040_84467735
m54284U_201205_001509/142281057/ccs	chr7	-	189	1	Intergenic	novelGene_4134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGGAACAGCTTCTCT	6999	False	NA	NA	False	NA	NA	NA	132984668	132984479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_132984500_132984700
m54284U_201205_001509/142409934/ccs	chr1	-	172	1	Intergenic	novelGene_317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGATTTACTTATTTTT	NA	False	NA	0	True	NA	NA	NA	132949476	132949304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_132949300_132949500
m54284U_201205_001509/142542619/ccs	chr6	-	4135	21	NIC	ENSMUSG00000030257.17	novel	8887	22	NA	NA	0	-4421	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	7.39509972887452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGTGTCTGTAGGTGTG	6453	False	NA	NA	False	NA	NA	NA	112924227	112699355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_112700163_112706609_112706760_112708289_112708471_112712794_112712875_112715843_112716072_112716279_112716386_112718321_112718457_112723852_112723931_112726322_112726384_112731531_112731635_112736709_112736738_112743828_112743914_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399_112806593_112923390
m54284U_201205_001509/142608924/ccs	chr5	+	207	1	Intergenic	novelGene_2708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGAGTACTGACTTCCG	NA	False	NA	NA	False	NA	NA	NA	103874759	103874966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_103874800_103875000
m54284U_201205_001509/142805803/ccs	chr11	-	218	1	Intergenic	novelGene_5690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGCAGGGTCTGATAG	NA	False	NA	NA	False	NA	NA	NA	6335239	6335021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_6335000_6335200
m54284U_201205_001509/143066285/ccs	chr11	-	218	1	Intergenic	novelGene_5830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTAGATTGAGTTTAA	NA	False	NA	NA	False	NA	NA	NA	53229125	53228907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_53228900_53229100
m54284U_201205_001509/143067343/ccs	chr10	+	3018	11	NNC	ENSMUSG00000034674.19	novel	2959	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	436.592269743751	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTAGTATACAGGTTT	NA	False	NA	NA	False	AATAAA	-14	NA	82465661	82486158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82479120_82479180_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
m54284U_201205_001509/143131826/ccs	chr9	+	486	5	NNC	ENSMUSG00000009927.10	novel	1280	5	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	1086	junction_2	4815.64452461973	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGGTGCATCTGTTTC	NA	False	NA	92	True	AATAAA	-17	NA	44318991	44321489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_44319055_44319284_44319381_44319985_44320167_44321250_44321350_44321442
m54284U_201205_001509/143132022/ccs	chr5	-	4735	1	Intergenic	novelGene_2767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	False	NA	NA	False	NA	NA	NA	110617080	110612345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_110612300_110617100
m54284U_201205_001509/143329575/ccs	chr5	-	1224	11	NIC	ENSMUSG00000028969.11	novel	2059	12	NA	NA	0	191	intron_retention	FALSE	canonical	0	0	junction_3	55.0178152965019	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGATGATATGGTGGTGG	NA	False	NA	-9	True	CATAAA	-18	NA	24628528	24624182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24624461_24624597_24624679_24624780_24624842_24625256_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627557_24627645_24627714_24627795_24627885_24628446
m54284U_201205_001509/143526653/ccs	chr11	-	1517	12	NIC	ENSMUSG00000075528.14	novel	1516	12	NA	NA	0	175	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	232.575696377447	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTGGTATAGTTGCTT	NA	False	NA	-1	True	ATTAAA	-40	NA	101308232	101297489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302051_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308165
m54284U_201205_001509/14354977/ccs	chr14	-	195	1	Intergenic	novelGene_7565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTGGAAAGGGTTGT	NA	False	NA	NA	False	NA	NA	NA	83619179	83618984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_83619000_83619200
m54284U_201205_001509/143722577/ccs	chr5	-	4407	16	NIC	ENSMUSG00000041740.17	novel	3112	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	1263	junction_13	134.410548527843	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTTCCCGACAAGCAT	NA	False	NA	-20	True	AATAAA	-20	NA	115410954	115379828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
m54284U_201205_001509/144116572/ccs	chr17	+	2076	1	Intergenic	novelGene_8386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAATTAATTTTTAGAA	NA	False	NA	NA	False	NA	NA	NA	17225379	17227455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_17225400_17227500
m54284U_201205_001509/14418979/ccs	chr9	-	191	1	Intergenic	novelGene_4814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAAGTGCTCTAAACTGC	NA	False	NA	NA	False	NA	NA	NA	58208018	58207827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58207800_58208000
m54284U_201205_001509/144573833/ccs	chr7	-	7085	40	NIC	ENSMUSG00000038371.16	novel	7090	40	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	22	junction_39	19.8558248483317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGAGTGCTGTGATG	NA	False	NA	NA	False	ATTAAA	-20	NA	110214127	109907219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159551_110213913
m54284U_201205_001509/144640097/ccs	chr2	-	1576	1	Antisense	novelGene_ENSMUSG00000027678.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165912542	165910966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_165911000_165912500
m54284U_201205_001509/144703696/ccs	chr12	-	194	1	Intergenic	novelGene_6943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAATCCTACATCCAATAGA	NA	False	NA	NA	False	NA	NA	NA	118174658	118174464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_118174500_118174700
m54284U_201205_001509/144770986/ccs	chr9	+	189	1	Intergenic	novelGene_4972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAATTATTCTCTTCTT	9943	False	NA	NA	False	NA	NA	NA	78458153	78458342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_78458200_78458300
m54284U_201205_001509/144834967/ccs	chr2	-	4245	21	NNC	ENSMUSG00000039671.19	novel	5076	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_19	190.339821109509	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165740936	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_165627659_165629083_165629164_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165694787_165694800_165717624_165717696_165740835
m54284U_201205_001509/145099217/ccs	chrX	+	961	3	NIC	ENSMUSG00000079638.9	novel	799	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_2	18.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTTGTTTTGTGCTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	36593719	36598459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_+_36594405_36595944_36595991_36598229
m54284U_201205_001509/145295704/ccs	chr12	-	4613	1	Antisense	novelGene_ENSMUSG00000021111.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGAGCATAAATGGGTG	NA	False	NA	NA	False	NA	NA	NA	105805516	105800903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_-_105800900_105805500
m54284U_201205_001509/145359196/ccs	chr10	-	273	1	Antisense	novelGene_ENSMUSG00000112068.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACAGAAGTGTTTCTTT	3453	False	NA	NA	False	NA	NA	NA	128452119	128451846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_-_128451800_128452100
m54284U_201205_001509/145686531/ccs	chr7	-	7848	1	Genic_Genomic	ENSMUSG00000092225.2	novel	NA	NA	NA	NA	47239	4681	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGATGCCCAACTTCT	NA	False	NA	-13	True	AGTAAA	-10	NA	42469419	42461571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_-_42461600_42469400
m54284U_201205_001509/145689117/ccs	chr4	+	2615	8	NIC	ENSMUSG00000028911.17	novel	2257	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	176.6374125439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACCGCGCTTGAATCTA	NA	False	NA	22	True	AATAAA	-22	NA	131600927	131629017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_131601182_131612619_131612804_131613441_131613616_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
m54284U_201205_001509/145949680/ccs	chr7	+	235	1	Intergenic	novelGene_3662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCCAGTGATGTCACCT	NA	False	NA	NA	False	AAGAAA	-42	NA	15572588	15572823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_15572600_15572800
m54284U_201205_001509/146016882/ccs	chr3	+	5103	6	NNC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	178.337208680634	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237399	16271201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_16237685_16238085_16238111_16243641_16243728_16257358_16257384_16257989_16259589_16268118
m54284U_201205_001509/146017042/ccs	chr17	+	3915	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_11	85.4818183840179	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATGGGAGAAAGGCGT	NA	False	NA	31	True	AATAAA	-28	NA	66090224	66148917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136374_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
m54284U_201205_001509/14616424/ccs	chr4	+	185	1	Intergenic	novelGene_2441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGCTTTGTTTATGCTG	NA	False	NA	NA	False	NA	NA	NA	156198637	156198822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_156198600_156198800
m54284U_201205_001509/146276633/ccs	chr9	+	1834	7	NIC	ENSMUSG00000032333.7	novel	2236	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	122.45498038962	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAAGTGCAGCTGGCTG	NA	False	NA	11	True	AATAAA	-22	NA	58160474	58169803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_58160561_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
m54284U_201205_001509/146539838/ccs	chrX	-	4293	6	NIC	ENSMUSG00000045180.14	novel	4338	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	25.3566559309385	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAATGTCTTTATTTCCT	NA	False	NA	-2	True	AATAAA	-21	NA	151427106	151392987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_151395791_151396390_151396664_151400188_151400352_151401896_151402443_151406121_151406332_151426808
m54284U_201205_001509/146736607/ccs	chr17	-	171	1	Intergenic	novelGene_8485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAAAAGGCTCT	NA	False	NA	NA	False	NA	NA	NA	29356526	29356355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29356400_29356500
m54284U_201205_001509/146737343/ccs	chr4	-	164	1	Intergenic	novelGene_1970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTAAAGGAGCA	NA	False	NA	NA	False	NA	NA	NA	105461946	105461782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_105461800_105461900
m54284U_201205_001509/147064041/ccs	chr9	+	5524	34	NIC	ENSMUSG00000035024.17	novel	5149	35	NA	NA	80	0	intron_retention	FALSE	canonical	3	212	junction_3	21.3628411629353	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGCATTTATTATAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	26942024	27006611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
m54284U_201205_001509/147326781/ccs	chr11	+	198	1	Intergenic	novelGene_5900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCGTGCTTCCACTCTT	NA	False	NA	NA	False	NA	NA	NA	61726344	61726542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_61726300_61726500
m54284U_201205_001509/147326828/ccs	chr15	+	2130	7	NIC	ENSMUSG00000000531.6	novel	2033	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	148	junction_1	34.2782730020052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCAGTGTGGTAACT	6241	False	NA	12	True	TATAAA	-21	NA	101122068	101130637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128673_101128865_101128933_101129397
m54284U_201205_001509/147327505/ccs	chr6	-	1409	4	NIC	ENSMUSG00000030035.15	novel	981	5	NA	NA	0	0	intron_retention	TRUE	canonical	3	42	junction_3	51.6333225737023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTGATTCTGGGTAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	83098387	83096025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_83097026_83097165_83097269_83097752_83097855_83098183
m54284U_201205_001509/147457461/ccs	chr1	+	182	1	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTTTTTGTACAAAC	NA	False	NA	NA	False	NA	NA	NA	36937778	36937960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36937800_36938000
m54284U_201205_001509/147458201/ccs	chr15	-	169	1	Intergenic	novelGene_7760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATTACATCTAAGC	NA	False	NA	NA	False	NA	NA	NA	73527331	73527162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_73527200_73527300
m54284U_201205_001509/14746473/ccs	chr8	-	199	1	Intergenic	novelGene_4412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCCTGACTAAGACAGT	NA	False	NA	NA	False	AAGAAA	-7	NA	94925479	94925280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_94925300_94925500
m54284U_201205_001509/147784068/ccs	chrX	-	197	1	Intergenic	novelGene_9727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTGGGTGTGGTGGCA	NA	False	NA	NA	False	NA	NA	NA	161645264	161645067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161645100_161645300
m54284U_201205_001509/147851836/ccs	chr6	-	176	1	Intergenic	novelGene_3559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTATTTTCCTCTT	NA	False	NA	NA	False	NA	NA	NA	137378400	137378224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_137378200_137378400
m54284U_201205_001509/147916540/ccs	chr5	+	384	1	Intergenic	novelGene_2487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAGCTGACCTTAGGTA	NA	False	NA	NA	False	AATAAA	-37	NA	24462275	24462659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_24462300_24462700
m54284U_201205_001509/147982222/ccs	chr2	-	211	1	Antisense	novelGene_ENSMUSG00000037754.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAAGTAGTTGTTCTC	3711	False	NA	NA	False	NA	NA	NA	158606950	158606739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_158606700_158607000
m54284U_201205_001509/148177057/ccs	chr11	+	185	1	Intergenic	novelGene_6032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAAAATTTCATCTTC	NA	False	NA	NA	False	NA	NA	NA	76291784	76291969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76291800_76292000
m54284U_201205_001509/148179019/ccs	chr13	-	192	1	Intergenic	novelGene_7179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTACTAGAGAATTCA	9371	False	NA	NA	False	NA	NA	NA	66018116	66017924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_66017900_66018100
m54284U_201205_001509/148245120/ccs	chr5	-	184	1	Intergenic	novelGene_2773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAATGAATGGGGTG	NA	False	NA	NA	False	NA	NA	NA	112807106	112806922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_112806900_112807100
m54284U_201205_001509/148505191/ccs	chr3	+	1211	3	NIC	ENSMUSG00000048100.14	novel	1655	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	86	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTGAGTTTGTGTTTGC	NA	False	NA	14	True	AATAAA	-23	NA	108479014	108489385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_108479065_108485431_108485530_108488322
m54284U_201205_001509/148637953/ccs	chr6	+	2393	3	NIC	ENSMUSG00000030087.12	novel	2373	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAACTCTAC	NA	False	NA	11	True	AATAAA	-7	NA	90439557	90452203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_90439708_90443401_90444506_90451064
m54284U_201205_001509/14878184/ccs	chr1	-	175	1	Intergenic	novelGene_370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGTTTTTTAGCTGG	5214	False	NA	NA	False	NA	NA	NA	151340099	151339924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_151339900_151340100
m54284U_201205_001509/148833650/ccs	chr7	-	2106	8	NNC	ENSMUSG00000007891.17	novel	2127	9	NA	NA	-77	0	intron_retention	FALSE	canonical	2	122	junction_1	698.494474288985	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	8788	False	NA	-8	True	AATAAA	-17	NA	141941671	141929653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_141930669_141930767_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
m54284U_201205_001509/148965600/ccs	chr14	+	177	1	Intergenic	novelGene_7511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAGTGCACTATGCC	NA	False	NA	NA	False	NA	NA	NA	64808068	64808245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_64808100_64808200
m54284U_201205_001509/149029075/ccs	chr5	+	168	1	Intergenic	novelGene_2775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAGTCATATTAT	NA	False	NA	NA	False	NA	NA	NA	113242971	113243139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_113243000_113243100
m54284U_201205_001509/149030389/ccs	chr7	-	4952	26	NIC	ENSMUSG00000045659.19	novel	5149	27	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_18	56.3032361414511	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTGTCCTGGCTCTTGCT	NA	False	NA	-6	True	ATTAAA	-13	NA	115907590	115722727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_115724056_115727788_115727929_115728626_115728761_115731855_115732012_115734273_115734475_115735152_115735257_115736221_115736340_115736424_115736614_115739511_115739739_115739850_115739960_115741932_115742035_115742524_115742675_115744150_115744232_115744404_115744474_115753867_115753922_115756716_115756804_115757091_115757615_115763266_115763732_115774946_115775048_115776120_115776194_115779628_115779734_115780408_115780521_115788504_115788589_115907159_115907218_115907306_115907384_115907485
m54284U_201205_001509/149096302/ccs	chr1	+	183	1	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAATTGATTTCATCA	NA	False	NA	NA	False	NA	NA	NA	37943808	37943991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_37943800_37944000
m54284U_201205_001509/14943003/ccs	chr14	+	201	1	Intergenic	novelGene_7461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTCTGTGAAGGTTCTATG	NA	False	NA	NA	False	NA	NA	NA	54824366	54824567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54824400_54824600
m54284U_201205_001509/14943223/ccs	chr14	-	3312	18	NIC	ENSMUSG00000041594.19	novel	3416	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_16	48.7623997184058	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTGTCTTGGTTTC	NA	False	NA	-3	True	AGTAAA	-19	NA	123220695	123156389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123209151_123209369_123210581_123210698_123215579_123215699_123220583
m54284U_201205_001509/149817223/ccs	chr6	-	222	1	Intergenic	novelGene_3372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGGCCGACAAGATGGT	4535	False	NA	NA	False	NA	NA	NA	86581432	86581210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_86581200_86581400
m54284U_201205_001509/149883582/ccs	chr8	+	2094	17	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	163.36687049399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415900	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416336_85416538_85417145_85417202_85417430_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201205_001509/15007768/ccs	chr6	-	92	1	Intergenic	novelGene_3390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGGGCTACCAAGCAGA	NA	False	NA	NA	False	NA	NA	NA	91809556	91809464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_91809500_91809600
m54284U_201205_001509/150143480/ccs	chr4	-	170	1	Intergenic	novelGene_1819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATGTGTGTATATA	NA	False	NA	NA	False	NA	NA	NA	41364588	41364418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_41364400_41364600
m54284U_201205_001509/150276801/ccs	chr12	+	2433	4	Fusion	ENSMUSG00000113294.2_ENSMUSG00000114025.2	novel	1214	3	NA	NA	-316	-533	intron_retention	FALSE	canonical	1	4	junction_1	62.8348806175537	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATTGAAATTAAA	NA	False	NA	-23	True	NA	NA	NA	17931881	17954143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr12_+_17932324_17950611_17950788_17950987_17951049_17952389
m54284U_201205_001509/150603358/ccs	chr4	-	227	1	Intergenic	novelGene_2149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGTCAGGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	129312856	129312629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129312600_129312900
m54284U_201205_001509/150733847/ccs	chr6	-	162	1	Intergenic	novelGene_3499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	124781400	124781238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_124781200_124781400
m54284U_201205_001509/15073961/ccs	chr17	+	1968	8	NNC	ENSMUSG00000023908.9	novel	2040	8	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_7	153.550231095195	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTCTTGTCCCTTTATT	3003	False	NA	34	True	AAAAAG	-45	NA	23945374	23955709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955364_23955468
m54284U_201205_001509/15074956/ccs	chr19	-	3396	18	NIC	ENSMUSG00000025007.14	novel	3527	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	39	junction_11	281.263301876905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACAGTTCGTTTTCTC	NA	False	NA	-11	True	AATAAA	-18	NA	40576867	40538700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
m54284U_201205_001509/150800447/ccs	chr17	+	170	1	Intergenic	novelGene_8715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATAATTAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	71963137	71963307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71963100_71963300
m54284U_201205_001509/151258948/ccs	chr19	+	355	1	Intergenic	novelGene_9136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTCTTGCGAAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	7190065	7190420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_7190100_7190400
m54284U_201205_001509/151324515/ccs	chr17	-	1164	9	NNC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	75	junction_6	914.111146141431	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512403_80512511_80512690_80512868_80513276_80513458_80514603
m54284U_201205_001509/151453993/ccschrUn	chrUn_JH584304v1	-	2664	6	Intergenic	novelGene_9753	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	296	junction_1	198.880265486548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATCTTCTGTCTTCCCC	NA	False	NA	-35	True	AATAAA	-20	NA	59716	52188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52368_53535_54868_55111_55702_56985_57152_58563_58836_59591
m54284U_201205_001509/151584893/ccs	chr1	+	268	1	Intergenic	novelGene_206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGTCATTTATGAGGAG	NA	False	NA	NA	False	NA	NA	NA	77392064	77392332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_77392100_77392300
m54284U_201205_001509/151781636/ccs	chr7	+	171	1	Intergenic	novelGene_3988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGACCCTCTTTTC	NA	False	NA	NA	False	NA	NA	NA	101496507	101496678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_101496500_101496700
m54284U_201205_001509/151847221/ccs	chr5	+	2056	10	NNC	ENSMUSG00000029247.18	novel	2482	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	97	junction_1	1034.83093388649	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATTCTCGCTGTGTGGTC	286	False	NA	15	True	ATTAAA	-18	NA	77099153	77115352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_77099190_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
m54284U_201205_001509/151847650/ccs	chr17	-	195	1	Intergenic	novelGene_8597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTGAGGAGTCCAACA	NA	False	NA	NA	False	NA	NA	NA	43192528	43192333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_43192300_43192500
m54284U_201205_001509/151914464/ccs	chr14	-	181	1	Intergenic	novelGene_7498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTCTTTAACCAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	60791001	60790820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_60790800_60791000
m54284U_201205_001509/151980698/ccs	chrX	-	238	1	Intergenic	novelGene_9621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCTAGCCTGGCTAAAA	NA	False	NA	NA	False	NA	NA	NA	128613660	128613422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_128613400_128613700
m54284U_201205_001509/152174906/ccs	chr2	-	190	1	Intergenic	novelGene_627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTCCACATCACATGT	NA	False	NA	NA	False	NA	NA	NA	24775534	24775344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_24775300_24775500
m54284U_201205_001509/152240819/ccs	chr11	-	203	1	Intergenic	novelGene_6477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAATAGGTTGTTAGT	6683	False	NA	NA	False	NA	NA	NA	116522881	116522678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116522700_116522900
m54284U_201205_001509/152241686/ccs	chrX	+	2106	10	NNC	ENSMUSG00000073125.11	novel	1564	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_5	547.549851160762	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGGCATGAGTCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	72235812	72246536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_72235856_72237775_72237913_72238605_72238676_72239547_72239583_72240958_72241077_72241214_72241732_72241891_72241992_72243351_72243451_72245455_72245552_72245645
m54284U_201205_001509/152371264/ccs	chr5	-	183	1	Intergenic	novelGene_2605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAGGACAGAACCAAC	NA	False	NA	NA	False	NA	NA	NA	67591839	67591656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_67591700_67591800
m54284U_201205_001509/152502340/ccs	chr15	-	179	1	Intergenic	novelGene_7619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	8155780	8155601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_8155600_8155800
m54284U_201205_001509/152635652/ccs	chr2	+	197	1	Intergenic	novelGene_864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGGTTGTTTGGGGAAC	NA	False	NA	NA	False	NA	NA	NA	73727484	73727681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_73727500_73727700
m54284U_201205_001509/15271951/ccs	chr11	-	184	1	Intergenic	novelGene_6486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGAGACCTTTATGTAG	NA	False	NA	NA	False	NA	NA	NA	116945093	116944909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116944900_116945100
m54284U_201205_001509/15272266/ccs	chr18	-	2599	3	NIC	ENSMUSG00000024645.6	novel	2499	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	61	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTTAAAAGCATTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	84969649	84965412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_84965871_84965958_84967578_84969127
m54284U_201205_001509/152963580/ccs	chr2	-	2481	1	FSM	ENSMUSG00000075012.5	ENSMUST00000099678.5	3134	1	653	0	653	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGAGGTTTGATTTGAT	NA	False	NA	NA	False	AATAAA	-26	NA	102282191	102279710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_102279700_102282200
m54284U_201205_001509/153093759/ccs	chr9	-	186	1	Intergenic	novelGene_4641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCAGATCTGGCAAGAT	3834	False	NA	NA	False	NA	NA	NA	15302623	15302437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_15302400_15302600
m54284U_201205_001509/153094207/ccs	chr9	-	177	1	Intergenic	novelGene_5054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTTGAAAGAGTTTGTT	9802	False	NA	NA	False	NA	NA	NA	104093206	104093029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_104093000_104093200
m54284U_201205_001509/153157636/ccs	chr1	-	418	1	Intergenic	novelGene_216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	-5	True	NA	NA	NA	84310374	84309956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_84310000_84310400
m54284U_201205_001509/153159977/ccs	chr19	-	188	1	Intergenic	novelGene_9188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATAAGTTTAGATTTAG	NA	False	NA	NA	False	NA	NA	NA	24230997	24230809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_24230800_24231000
m54284U_201205_001509/153291246/ccs	chr11	+	193	1	Intergenic	novelGene_6251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCCAGAAGATTCTATGTA	NA	False	NA	NA	False	TTTAAA	-4	NA	96391635	96391828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_96391600_96391800
m54284U_201205_001509/153354549/ccs	chr9	+	195	1	Intergenic	novelGene_5071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTACAGGAAAACACAAC	NA	False	NA	NA	False	NA	NA	NA	107075380	107075575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_107075400_107075600
m54284U_201205_001509/153356525/ccs	chrX	-	200	1	Intergenic	novelGene_9448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCACAACATAGTATTA	NA	False	NA	NA	False	AATAAA	-4	NA	47596533	47596333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_47596300_47596500
m54284U_201205_001509/15336122/ccs	chr14	-	1612	8	NIC	ENSMUSG00000007589.10	novel	2956	9	NA	NA	0	1105	combination_of_known_junctions	FALSE	canonical	2	15	junction_5	121.452434629986	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAGGTCATTCCTCCGA	NA	False	NA	-25	True	AATAAA	-15	NA	55919277	55916558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918456_55918547_55918681_55918769_55918846
m54284U_201205_001509/153421213/ccs	chr4	+	191	1	Intergenic	novelGene_1920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGCTGGTCTCAAACT	NA	False	NA	NA	False	NA	NA	NA	83481660	83481851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_83481700_83481900
m54284U_201205_001509/153617880/ccs	chr2	-	2921	12	NIC	ENSMUSG00000013465.20	novel	2754	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	539	junction_6	55.4442613414813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGAGGAATCTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	25101393	25089727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
m54284U_201205_001509/153683621/ccs	chr4	+	3516	1	NIC	ENSMUSG00000078773.12	novel	2870	15	NA	NA	2915	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	7803	False	NA	19	True	AGTAAA	-16	NA	11612289	11615805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_11612300_11615800
m54284U_201205_001509/153683941/ccs	chr10	-	2062	6	NIC	ENSMUSG00000087177.8	novel	503	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	5.31413210223457	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTGTTTTTTCAGCAT	5658	False	NA	-1	True	AATAAA	-16	NA	39608002	39497409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_39498724_39508945_39509013_39515559_39515763_39516375_39516508_39557468_39557546_39607733
m54284U_201205_001509/153748054/ccs	chr7	-	212	1	Genic_Genomic	ENSMUSG00000058818.14	novel	NA	NA	NA	NA	8755	21	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAAATGAAAGTTTGGA	5784	False	NA	NA	False	NA	NA	NA	3714598	3714386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_-_3714400_3714600
m54284U_201205_001509/153749275/ccs	chr11	+	2229	18	NIC	ENSMUSG00000020739.12	novel	2230	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	862	junction_15	81.2335264108902	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATTGTTAATCCTACC	NA	False	NA	12	True	AATAAA	-18	NA	115455350	115474732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
m54284U_201205_001509/15401515/ccs	chr7	-	1890	1	Intergenic	novelGene_3869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAACTAAATTATACCAT	NA	False	NA	NA	False	NA	NA	NA	55824886	55822996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_55823000_55824900
m54284U_201205_001509/15403297/ccs	chr8	-	176	1	Intergenic	novelGene_4366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGTAATATGCC	9302	False	NA	NA	False	NA	NA	NA	84846372	84846196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_84846200_84846400
m54284U_201205_001509/154077485/ccs	chr14	-	5867	25	NIC	ENSMUSG00000033487.15	novel	6143	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_20	41.9834416764514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTTTGTATTTATAA	NA	False	NA	-1	True	AATAAA	-24	NA	72947437	72775385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
m54284U_201205_001509/154340055/ccs	chr4	-	172	1	Intergenic	novelGene_1981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGGTGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	107222444	107222272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_107222300_107222400
m54284U_201205_001509/154601631/ccs	chr2	+	200	1	Intergenic	novelGene_1308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAACCAACAGATGGTG	NA	False	NA	NA	False	NA	NA	NA	179548180	179548380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_179548200_179548400
m54284U_201205_001509/154730606/ccs	chr2	+	184	1	Intergenic	novelGene_855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTTGAAGTAAATCAAC	NA	False	NA	NA	False	NA	NA	NA	72495796	72495980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_72495800_72496000
m54284U_201205_001509/154798215/ccs	chr17	+	232	1	Intergenic	novelGene_8359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTACATCAATTCTGAG	NA	False	NA	NA	False	AAAAAG	-28	NA	7458411	7458643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_7458400_7458600
m54284U_201205_001509/155060986/ccs	chr16	-	192	1	Intergenic	novelGene_8040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGACATAATGTTCTAC	3962	False	NA	NA	False	NA	NA	NA	8421193	8421001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_8421000_8421200
m54284U_201205_001509/155385972/ccs	chr6	+	188	1	Intergenic	novelGene_3361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAGAAAAGCAATG	NA	False	NA	8	True	NA	NA	NA	86304190	86304378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_86304200_86304400
m54284U_201205_001509/155453696/ccs	chr9	+	3012	13	NIC	ENSMUSG00000032058.15	novel	3430	15	NA	NA	0	-184	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	162.095308040945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAAATGCTTTTAAGT	29	False	NA	14	True	ATTAAA	-20	NA	50768278	50792547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_50768399_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
m54284U_201205_001509/155584422/ccs	chr9	-	185	1	Intergenic	novelGene_5160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAACATAGGTTTCAAC	NA	False	NA	NA	False	NA	NA	NA	122592998	122592813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_122592800_122593000
m54284U_201205_001509/155781569/ccs	chr6	-	188	1	Intergenic	novelGene_3293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACTTAAAAAGTATCAAAAC	NA	False	NA	-10	True	NA	NA	NA	57513491	57513303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_57513300_57513500
m54284U_201205_001509/155781631/ccs	chr3	-	202	1	Intergenic	novelGene_1352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGTTCTCTTGGGTGAG	NA	False	NA	NA	False	NA	NA	NA	11284506	11284304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_11284300_11284500
m54284U_201205_001509/155846377/ccs	chr3	+	190	1	Intergenic	novelGene_1493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACACAGGAACCAGATG	1673	False	NA	NA	False	NA	NA	NA	88588567	88588757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88588600_88588800
m54284U_201205_001509/155847374/ccs	chr1	-	1449	1	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCCTGACTACACCATA	4338	False	NA	NA	False	AATAAA	-42	NA	34140238	34138789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_34138800_34140200
m54284U_201205_001509/155911915/ccs	chr7	-	171	1	Intergenic	novelGene_3765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACCATACATGGCC	NA	False	NA	-2	True	NA	NA	NA	29672349	29672178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29672200_29672300
m54284U_201205_001509/15598871/ccs	chr9	+	6000	17	NIC	ENSMUSG00000025898.7	novel	4446	18	NA	NA	0	70	intron_retention	FALSE	canonical	3	200	junction_7	32.1159398702576	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATATCCTGCTCACTGC	9	True	NA	19	True	ATTAAA	-19	NA	3404087	3479306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
m54284U_201205_001509/156043805/ccs	chr3	+	1881	6	NIC	ENSMUSG00000004897.17	novel	377	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	1168.18885459501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGACTAATTCTTTTCAA	NA	False	NA	25	True	AATAAA	-21	NA	87817340	87823439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_87817371_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
m54284U_201205_001509/156303570/ccs	chr7	-	132	1	Intergenic	novelGene_4083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTGATCTGTCTCCCC	NA	False	NA	NA	False	AATAAA	-10	NA	126019902	126019770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_126019800_126019900
m54284U_201205_001509/156305074/ccs	chr8	-	145	1	Intergenic	novelGene_4583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	124053133	124052988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124053000_124053100
m54284U_201205_001509/156436327/ccs	chr10	+	1760	10	NNC	ENSMUSG00000025393.13	novel	1916	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3385.75991069058	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTCTGTTTATGTTGC	NA	False	NA	22	True	AATAAA	-15	NA	127919174	127926142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127919323_127919760_127919944_127920170_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
m54284U_201205_001509/156567706/ccs	chr2	-	185	1	Intergenic	novelGene_625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAGATGACTAATTA	919	False	NA	NA	False	NA	NA	NA	23154975	23154790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_23154800_23155000
m54284U_201205_001509/15664305/ccs	chr8	-	191	1	Intergenic	novelGene_4410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCACTTCTCACAAAGTAA	9227	False	NA	NA	False	NA	NA	NA	94908821	94908630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_94908600_94908800
m54284U_201205_001509/156699247/ccs	chr15	-	222	1	Intergenic	novelGene_7993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTCCTGAGCTACAAAC	NA	False	NA	NA	False	NA	NA	NA	100537642	100537420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100537400_100537600
m54284U_201205_001509/156764022/ccs	chr8	-	2551	8	NIC	ENSMUSG00000008892.13	novel	1354	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2053	junction_7	125.617820131914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCATCTGACTTCTTAG	NA	False	NA	-11	True	AATAAA	-22	NA	23083774	23067101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_23067619_23068058_23068117_23069007_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
m54284U_201205_001509/157026398/ccs	chr3	-	2109	6	NIC	ENSMUSG00000028010.17	novel	1271	7	NA	NA	-203	0	intron_retention	FALSE	canonical	3	868	junction_5	370.381749010396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACGTTTATTGAACGGAA	NA	False	NA	-5	True	AATAAA	-18	NA	129624784	129618564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129624503_129624766
m54284U_201205_001509/157092527/ccs	chrX	-	2527	13	NNC	ENSMUSG00000057421.13	novel	2530	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_2	242.765490408611	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTCATGGTGTTTGT	NA	False	NA	-36	True	AATAAA	-4	NA	95000519	94978940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_94979256_94980977_94981126_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
m54284U_201205_001509/157221050/ccs	chr2	-	165	1	Intergenic	novelGene_899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAAAACAACT	3130	False	NA	NA	False	NA	NA	NA	84510561	84510396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_84510400_84510600
m54284U_201205_001509/157221267/ccs	chr1	+	183	1	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGATTGAAAATATTGA	3075	False	NA	NA	False	NA	NA	NA	16056374	16056557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_16056400_16056600
m54284U_201205_001509/1574008/ccs	chr4	-	186	1	Intergenic	novelGene_2301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTATTGGGAGATATTAA	5712	False	NA	NA	False	NA	NA	NA	140952140	140951954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_140952000_140952100
m54284U_201205_001509/157485072/ccs	chr14	-	1548	1	Intergenic	novelGene_7585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACCCGACAACCACCTG	NA	False	NA	NA	False	NA	NA	NA	101873956	101872408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_101872400_101874000
m54284U_201205_001509/157548654/ccs	chr19	+	2381	22	NNC	ENSMUSG00000024981.7	novel	455	3	NA	NA	-295	950	at_least_one_novel_splicesite	TRUE	canonical	3	6	junction_1	18.582902438493	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGCCTGCAGTCTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	55241505	55285060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_55241534_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
m54284U_201205_001509/1575509/ccs	chr15	+	168	1	Intergenic	novelGene_7943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAATAAAAATAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	98596854	98597022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98596900_98597000
m54284U_201205_001509/157680604/ccs	chr14	-	3474	1	Antisense	novelGene_ENSMUSG00000040818.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACCCAAAAAACAATGAC	NA	False	NA	NA	False	ACTAAA	-42	NA	26329770	26326296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_-_26326300_26329800
m54284U_201205_001509/157747881/ccs	chr15	-	193	1	Intergenic	novelGene_7822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACACTATGCTTCAGTC	NA	False	NA	NA	False	NA	NA	NA	80053201	80053008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_80053000_80053200
m54284U_201205_001509/157812242/ccs	chr17	-	184	1	Intergenic	novelGene_8652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACTGGCTACTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	56401983	56401799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_56401800_56402000
m54284U_201205_001509/157878777/ccs	chr7	+	190	1	Intergenic	novelGene_3750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGGGGTGGGGATTTA	9023	False	NA	NA	False	NA	NA	NA	28553020	28553210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28553000_28553200
m54284U_201205_001509/15796001/ccs	chr19	-	2710	10	NIC	ENSMUSG00000041488.17	novel	2810	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_8	163.137978410914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGGCCATCTCTCTG	7137	False	NA	-8	True	AATAAA	-25	NA	11796306	11754848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11780857_11780942_11796055
m54284U_201205_001509/158075199/ccs	chr14	+	179	1	Intergenic	novelGene_7415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAATTATTAATAATAC	NA	False	NA	NA	False	NA	NA	NA	46488726	46488905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_46488700_46488900
m54284U_201205_001509/158597213/ccs	chrX	+	3568	16	NNC	ENSMUSG00000041020.15	novel	3670	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	10	junction_12	45.3163693750209	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGCCATTGACCTTGA	NA	False	NA	7	True	AATAAA	-18	NA	158197567	158281753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_158197889_158226918_158226997_158228930_158229095_158242373_158242480_158245109_158245221_158252958_158253090_158255820_158255946_158265073_158265373_158265955_158266083_158272272_158272496_158273675_158273781_158274763_158274821_158275322_158275408_158275893_158276081_158279030_158279306_158280579
m54284U_201205_001509/158598937/ccs	chr10	+	8314	25	NIC	ENSMUSG00000037876.18	novel	2015	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_4	35.1364157012825	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGATGTTACAGTTCT	NA	False	NA	13	True	ATTAAA	-14	NA	66932270	67092097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_66932498_66993685_66993851_67025514_67025629_67051048_67051155_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
m54284U_201205_001509/15860557/ccs	chr8	-	2709	2	Intergenic	novelGene_4481	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCTTGGTCGTGGTGTC	NA	False	NA	NA	False	NA	NA	NA	108408873	108404227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_108406853_108408789
m54284U_201205_001509/15861705/ccs	chr17	-	7323	7	NIC	ENSMUSG00000062078.16	novel	5832	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	1001	junction_1	104.785495179438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTATGTTTGTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	10538309	10425479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_10428561_10432287_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
m54284U_201205_001509/158794679/ccs	chr1	-	189	1	Intergenic	novelGene_276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGAATGTGGTTGGTGTT	NA	False	NA	NA	False	NA	NA	NA	118653125	118652936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_118652900_118653100
m54284U_201205_001509/158796413/ccs	chr17	-	163	1	Intergenic	novelGene_8673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGATTCATCTTTA	NA	False	NA	NA	False	NA	NA	NA	64694191	64694028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_64694000_64694200
m54284U_201205_001509/158860742/ccs	chr9	-	170	1	Intergenic	novelGene_5117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTAAAAAAGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	110777654	110777484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_110777500_110777700
m54284U_201205_001509/158861446/ccs	chr9	-	203	1	ISM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	15893	665	9105	-665	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTGCTCTTGCAGAG	NA	False	NA	NA	False	NA	NA	NA	21045385	21045182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_21045200_21045400
m54284U_201205_001509/158925899/ccs	chr1	+	183	1	Intergenic	novelGene_521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTTTTCTTTATTCTT	2063	False	NA	NA	False	NA	NA	NA	181064129	181064312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_181064100_181064300
m54284U_201205_001509/158991123/ccs	chr15	+	260	1	Intergenic	novelGene_7800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATAGAGGTGTACCTATG	NA	False	NA	NA	False	NA	NA	NA	77793994	77794254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_77794000_77794300
m54284U_201205_001509/158992326/ccs	chr3	-	1622	6	NIC	ENSMUSG00000064068.16	novel	775	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	739	junction_1	44.7007829909052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGATCAAAGAATCCCTT	NA	False	NA	-22	True	AATAAA	-15	NA	89121219	89116393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89116729_89116811_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
m54284U_201205_001509/159122704/ccs	chr16	+	2425	13	NIC	ENSMUSG00000022945.13	novel	1922	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	827	junction_1	51.3717388800063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCTGACTTCGCT	4396	False	NA	21	True	AATAAA	-29	NA	93680818	93703003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
m54284U_201205_001509/159187520/ccs	chr13	-	200	1	Intergenic	novelGene_7082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATGAATACTAGGGGCA	NA	False	NA	NA	False	NA	NA	NA	54779979	54779779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_54779800_54780000
m54284U_201205_001509/15927032/ccs	chr5	+	176	1	Intergenic	novelGene_2813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGATTTATTTAAGT	5752	False	NA	NA	False	NA	NA	NA	115914466	115914642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115914500_115914600
m54284U_201205_001509/15927797/ccs	chr9	-	220	1	Intergenic	novelGene_4806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCTTTGAGGTTTAAT	NA	False	NA	NA	False	NA	NA	NA	57915126	57914906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_57914900_57915100
m54284U_201205_001509/159385115/ccs	chr17	-	207	1	Intergenic	novelGene_8666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAAGGTGGAATGT	NA	False	NA	NA	False	NA	NA	NA	57607397	57607190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_57607200_57607400
m54284U_201205_001509/159385771/ccs	chr5	-	173	1	Intergenic	novelGene_2836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGTGTCACA	NA	False	NA	NA	False	NA	NA	NA	119869882	119869709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_119869700_119869900
m54284U_201205_001509/159516526/ccs	chr12	-	3482	1	Antisense	novelGene_ENSMUSG00000097451.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCCTTTCTAAACTCAG	NA	False	NA	NA	False	NA	NA	NA	109574933	109571451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_-_109571500_109574900
m54284U_201205_001509/159647015/ccs	chr15	-	216	1	Intergenic	novelGene_7660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTTATTAAAAAAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	25771418	25771202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_25771200_25771400
m54284U_201205_001509/159713359/ccs	chr17	-	188	1	Intergenic	novelGene_8424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTGCACTTGGAACCG	NA	False	NA	NA	False	NA	NA	NA	26024849	26024661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26024700_26024800
m54284U_201205_001509/159777763/ccs	chr2	-	175	1	Intergenic	novelGene_818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAGAGAAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	65745119	65744944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_65744900_65745100
m54284U_201205_001509/15992257/ccs	chr3	+	863	3	NNC	ENSMUSG00000068523.13	novel	593	3	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	1735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGCCTCCTTACTGATG	NA	False	NA	1	True	AATAAA	-14	NA	146205926	146211302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_146206436_146209014_146209155_146211088
m54284U_201205_001509/15993431/ccs	chr11	-	191	1	Intergenic	novelGene_6021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTTAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75726406	75726215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75726200_75726400
m54284U_201205_001509/159975636/ccs	chr2	+	3252	12	NIC	ENSMUSG00000016253.13	novel	2279	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	502	junction_9	48.7159077655491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTTTACTCATTTCTT	NA	False	NA	40	True	AATAAA	-21	NA	174257643	174269295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174265942_174266398_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
m54284U_201205_001509/160303832/ccs	chr6	-	187	1	Intergenic	novelGene_3217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTGGTTCAGGAGACT	1260	False	NA	NA	False	NA	NA	NA	39066325	39066138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39066100_39066300
m54284U_201205_001509/160891358/ccs	chr19	-	175	1	Intergenic	novelGene_9207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATAAATAAATAAGA	675	False	NA	NA	False	NA	NA	NA	29812311	29812136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_29812100_29812300
m54284U_201205_001509/160957810/ccs	chr10	+	1601	5	NIC	ENSMUSG00000006732.15	novel	1791	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	167.502798484085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTGAGTGTTTGCCTG	NA	False	NA	13	True	TTTAAA	-18	NA	126877826	126882234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_126877940_126880335_126880521_126880624_126880739_126880894_126880997_126881147
m54284U_201205_001509/160958167/ccs	chr2	+	171	1	Intergenic	novelGene_617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAGTCTTTAAAAAAAAAA	395	False	NA	NA	False	NA	NA	NA	20672264	20672435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_20672300_20672400
m54284U_201205_001509/160958395/ccs	chr17	-	167	1	Genic_Genomic	ENSMUSG00000118107.2	novel	NA	NA	NA	NA	23196	13	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTAAAAAAAAGAAGTTC	NA	False	NA	NA	False	NA	NA	NA	26686687	26686520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr17_-_26686500_26686700
m54284U_201205_001509/160959116/ccs	chr1	-	179	1	Intergenic	novelGene_379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAATTATATGCTT	NA	False	NA	NA	False	NA	NA	NA	153214185	153214006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153214000_153214200
m54284U_201205_001509/161089271/ccs	chr3	-	239	1	Intergenic	novelGene_1438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCACAAGAACCATTCA	NA	False	NA	NA	False	AGTAAA	-40	NA	78018542	78018303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_78018300_78018500
m54284U_201205_001509/161089289/ccs	chr7	-	1803	6	NIC	ENSMUSG00000040177.11	novel	6773	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	33.5463857963865	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGATATTTGGTTTTTTTT	NA	False	NA	NA	False	AATATA	-25	NA	130964488	130944914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963662_130964236
m54284U_201205_001509/161090125/ccs	chr15	-	186	1	Intergenic	novelGene_7978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAATAAGGCTTTCAATGA	NA	False	NA	NA	False	NA	NA	NA	99948156	99947970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99948000_99948200
m54284U_201205_001509/161284277/ccs	chr13	+	183	1	Intergenic	novelGene_6949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAACTTGGCATGTTAGT	NA	False	NA	NA	False	NA	NA	NA	3583226	3583409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_3583200_3583400
m54284U_201205_001509/161285704/ccs	chr2	-	166	1	Intergenic	novelGene_795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAAAAAGCC	NA	False	NA	NA	False	NA	NA	NA	52955447	52955281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_52955300_52955400
m54284U_201205_001509/161416823/ccs	chr18	+	484	2	Intergenic	novelGene_9008	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTCTGAGTTATTG	NA	False	NA	NA	False	NA	NA	NA	69966687	69967867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_69966838_69967533
m54284U_201205_001509/161548814/ccs	chr18	-	176	1	Intergenic	novelGene_8986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAGAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	65024919	65024743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_65024700_65024900
m54284U_201205_001509/161549043/ccs	chr18	-	3107	13	NIC	ENSMUSG00000024587.11	novel	2103	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	3478	junction_12	554.799732385981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTCTGACATCCAGTA	NA	False	NA	-10	True	AATAAA	-26	NA	64649626	64633283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_64633721_64634373_64634947_64636578_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
m54284U_201205_001509/161677411/ccs	chr3	+	2332	1	NIC	ENSMUSG00000037894.14	novel	1069	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGTACTTTTGTTGT	NA	False	NA	32	True	ATTAAA	-21	NA	137570351	137572683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_137570400_137572700
m54284U_201205_001509/161678061/ccs	chr12	+	2692	19	NIC	ENSMUSG00000021144.15	novel	2775	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_12	139.782823173382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCCCTTCTGCGTCTTT	9323	False	NA	24	True	ATTAAA	-41	NA	113061897	113100826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094982_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
m54284U_201205_001509/161743238/ccs	chr7	-	206	1	Intergenic	novelGene_3686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGAGTATCTTGTGGGC	NA	False	NA	NA	False	NA	NA	NA	19172979	19172773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_19172800_19173000
m54284U_201205_001509/16190195/ccs	chr11	+	182	1	Intergenic	novelGene_6135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATACTGGCTACTTCCCT	NA	False	NA	NA	False	NA	NA	NA	84867928	84868110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_84867900_84868100
m54284U_201205_001509/162073217/ccs	chr3	-	1498	5	NIC	ENSMUSG00000028070.8	novel	908	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	839	junction_2	37.6920084368026	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965802	87963826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_87964084_87964292_87965145_87965227_87965339_87965436_87965546_87965633
m54284U_201205_001509/162398945/ccs	chr7	-	1660	10	NNC	ENSMUSG00000102252.6	novel	1932	10	NA	NA	919	-612	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_9	633.044671058493	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTTTTTCTTTGTCTG	NA	False	NA	-9	True	AATAAA	-18	NA	59653940	59632861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59653517
m54284U_201205_001509/162466265/ccs	chr2	+	2752	9	NIC	ENSMUSG00000027132.4	novel	2886	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_4	170.123806020792	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTGCATAGTTT	NA	False	NA	10	True	AATAAA	-20	NA	112209570	112244585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
m54284U_201205_001509/162662135/ccs	chr6	-	4458	1	Intergenic	novelGene_3292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	56814341	56809883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_56809900_56814300
m54284U_201205_001509/162727305/ccs	chr5	-	3394	1	FSM	ENSMUSG00000029202.13	ENSMUST00000201673.2	6051	1	2657	0	2657	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTTCTCCAATTTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	65766459	65763065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_65763100_65766500
m54284U_201205_001509/162728116/ccs	chr11	-	4203	12	NNC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	-821	0	intron_retention	FALSE	canonical	3	5	junction_11	215.598149304374	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	1186	False	NA	-2	True	AATAAA	-17	NA	100247775	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_100240428_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515_100247034_100247326
m54284U_201205_001509/162857555/ccs	chr18	+	174	1	Intergenic	novelGene_8990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAGACTGAGCAAGCT	NA	False	NA	NA	False	NA	NA	NA	65671031	65671205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_65671000_65671200
m54284U_201205_001509/162924001/ccs	chr8	-	8188	49	NNC	ENSMUSG00000036550.17	novel	8364	49	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	36	junction_36	346.676015874532	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGTCCACTGTGCCTT	NA	False	NA	-6	True	ATTAAA	-13	NA	96534092	96446258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481737_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488065_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
m54284U_201205_001509/163120268/ccs	chr2	+	4858	1	Genic_Genomic	ENSMUSG00000086904.2	novel	NA	NA	NA	NA	-2291	488	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGACTGGGTTGTTGGCT	NA	False	NA	NA	False	NA	NA	NA	33865966	33870824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_33866000_33870800
m54284U_201205_001509/16319838/ccs	chr7	-	151	1	Intergenic	novelGene_3602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	3234068	3233917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3233900_3234100
m54284U_201205_001509/163252365/ccs	chr16	-	216	1	Intergenic	novelGene_8064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCTCCAAACACAGTC	NA	False	NA	NA	False	NA	NA	NA	11416509	11416293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_11416300_11416500
m54284U_201205_001509/163382138/ccs	chr11	-	6060	27	NIC	ENSMUSG00000000804.15	novel	7053	34	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_21	17.942050043496	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTCTCTTTGTGATCCT	7362	False	NA	-14	True	AGTAAA	-22	NA	85030987	84875267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030923
m54284U_201205_001509/163774688/ccs	chr2	+	225	1	Intergenic	novelGene_967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATCTAAAACTACTTCAA	NA	False	NA	NA	False	AAAAAG	-23	NA	104296229	104296454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_104296200_104296500
m54284U_201205_001509/1639720/ccs	chr5	+	190	1	Intergenic	novelGene_2489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCTTGGTCATGATG	6626	False	NA	NA	False	NA	NA	NA	24849620	24849810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_24849600_24849800
m54284U_201205_001509/1640422/ccs	chr18	-	2160	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	567	0	567	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGGATGGTCTCTG	NA	False	NA	NA	False	TATAAA	-18	NA	32044310	32042150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_32042200_32044300
m54284U_201205_001509/164102221/ccs	chr15	-	189	1	Intergenic	novelGene_7981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAGGAGGGATGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	100046939	100046750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100046800_100046900
m54284U_201205_001509/164365998/ccs	chr11	-	5440	16	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	-138	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	96.2695290433179	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAAGTGATTTTTTATTAC	NA	False	NA	NA	False	NA	NA	NA	86435631	86389834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404121_86404217_86404372_86404464_86406916_86407018_86408175_86408219_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
m54284U_201205_001509/16451095/ccs	chr3	-	173	1	Intergenic	novelGene_1465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	86747922	86747749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_86747700_86747900
m54284U_201205_001509/164563399/ccs	chr4	+	695	5	Fusion	ENSMUSG00000078503.10_ENSMUSG00000058186.14	novel	1938	3	NA	NA	0	-1478	multi-exon	FALSE	canonical	0	0	junction_2	212.74926556865	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGGGTCTTCTATCATT	5019	False	NA	NA	False	TATAAA	-17	NA	145241453	145427732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_+_145241589_145314001_145314095_145422723_145422806_145425813_145425941_145427474
m54284U_201205_001509/164890342/ccs	chr6	+	227	1	Intergenic	novelGene_3493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAGGCAAGGGTGG	7398	False	NA	NA	False	NA	NA	NA	124500574	124500801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_124500600_124500800
m54284U_201205_001509/164955429/ccs	chr5	-	1839	5	NIC	ENSMUSG00000037339.18	novel	2112	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	70.1248885917119	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCTGCCTAGATTCT	NA	False	NA	-12	True	ATTAAA	-14	NA	33786943	33757699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786680
m54284U_201205_001509/165087621/ccs	chr5	-	2545	14	NNC	ENSMUSG00000005299.7	novel	5272	14	NA	NA	0	217	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	110.405438936429	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTTTTAATTTTCATCA	NA	False	NA	NA	False	AATAAA	-21	NA	33940081	33899660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904852_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
m54284U_201205_001509/165216773/ccs	chr10	-	5096	25	NNC	ENSMUSG00000039116.8	novel	6507	25	NA	NA	-140	260	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_24	21.1433188160127	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATTCCAAATCACATAAA	NA	False	NA	-1	True	ATTAAA	-9	NA	14421063	14280045	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_14281183_14285416_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420670
m54284U_201205_001509/165284360/ccs	chr15	+	161	1	Intergenic	novelGene_7715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTAAAAAATTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	54992749	54992910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_54992700_54992900
m54284U_201205_001509/165349132/ccs	chr7	-	175	1	Intergenic	novelGene_3955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGAAGTTT	6448	False	NA	NA	False	NA	NA	NA	96945413	96945238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_96945200_96945400
m54284U_201205_001509/165677755/ccs	chr16	+	189	1	Intergenic	novelGene_8123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	18313084	18313273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18313100_18313300
m54284U_201205_001509/165808442/ccs	chr6	-	168	1	Intergenic	novelGene_3569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTAAAAAAAGAATTT	NA	False	NA	NA	False	NA	NA	NA	142420451	142420283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_142420300_142420500
m54284U_201205_001509/165872305/ccs	chr5	+	1027	9	NIC	ENSMUSG00000019494.15	novel	1098	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	1568.8956655479	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGCCCTTCCAGTGGC	NA	False	NA	11	True	AATAAA	-12	NA	138159361	138162240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
m54284U_201205_001509/165937702/ccs	chr3	-	160	1	Intergenic	novelGene_1516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	89109915	89109755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89109800_89109900
m54284U_201205_001509/166003400/ccs	chr12	+	188	1	Intergenic	novelGene_6724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	75736702	75736890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_75736700_75736900
m54284U_201205_001509/166069134/ccs	chr11	-	172	1	Intergenic	novelGene_5802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTGTTTTTTTGTTTT	5561	False	NA	NA	False	NA	NA	NA	50219075	50218903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_50218900_50219100
m54284U_201205_001509/166070501/ccs	chr1	-	175	1	Intergenic	novelGene_380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCTTTTAAACATTTCAA	NA	False	NA	NA	False	NA	NA	NA	153287864	153287689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153287700_153287900
m54284U_201205_001509/166463023/ccs	chr16	-	173	1	Intergenic	novelGene_8193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31518815	31518642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31518600_31518800
m54284U_201205_001509/166725078/ccs	chr12	-	5274	2	NIC	ENSMUSG00000034460.10	novel	6402	3	NA	NA	439	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTGTTGAAGAAAGATT	NA	False	NA	-1	True	AATAAA	-18	NA	73159760	73146382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_73151013_73159116
m54284U_201205_001509/166725798/ccs	chr18	-	188	1	Intergenic	novelGene_8900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGATCCTTTAGCAATT	NA	False	NA	NA	False	NA	NA	NA	35943587	35943399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35943400_35943600
m54284U_201205_001509/167051318/ccs	chr2	+	482	3	Fusion	ENSMUSG00000078875.11_ENSMUSG00000082724.4	novel	2308	3	NA	NA	-50	-3120	multi-exon	FALSE	non_canonical	0	0	junction_2	13.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATTATTGTTTGCAA	NA	False	NA	NA	False	NA	NA	NA	176692698	176831004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_176692840_176830452_176830574_176830784
m54284U_201205_001509/167051379/ccs	chr5	+	4365	1	Antisense	novelGene_ENSMUSG00000062110.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGACTATATACTGGAG	NA	False	NA	NA	False	AATAAA	-38	NA	74551969	74556334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_74552000_74556300
m54284U_201205_001509/167051921/ccs	chr8	-	1615	8	NIC	ENSMUSG00000031774.9	novel	2873	8	NA	NA	0	717	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	224.490352503948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAGAAGCAAACTTAC	3861	False	NA	-4	True	AATAAA	-23	NA	95328354	95301567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328309
m54284U_201205_001509/16712745/ccs	chr19	-	183	1	Intergenic	novelGene_9095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATATATGTATATACC	6567	False	NA	NA	False	NA	NA	NA	5017385	5017202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5017200_5017400
m54284U_201205_001509/167184723/ccs	chrM	+	660	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	222	73	222	-73	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGACATCCGTTTATGA	-1	True	NA	41	True	NA	NA	NA	291	951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_300_1000
m54284U_201205_001509/167379115/ccs	chr4	-	220	1	Intergenic	novelGene_1808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAGTCTGGAACAGTT	7986	False	NA	NA	False	NA	NA	NA	40253699	40253479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_40253500_40253700
m54284U_201205_001509/167510020/ccs	chr3	+	3307	7	NIC	ENSMUSG00000028049.16	novel	1475	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	940	junction_5	92.7912831155073	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCATTTCCTGTATCT	NA	False	NA	18	True	ATTAAA	-22	NA	89084802	89090072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_89084965_89085296_89086531_89086623_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
m54284U_201205_001509/167576942/ccs	chrX	-	3103	1	NIC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	0	-32568	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACACCAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	96420822	96417719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_96417700_96420800
m54284U_201205_001509/167643896/ccs	chr5	-	177	1	Intergenic	novelGene_2515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	572	False	NA	NA	False	NA	NA	NA	31179562	31179385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_31179400_31179600
m54284U_201205_001509/167707046/ccs	chr6	-	4402	8	NIC	ENSMUSG00000004980.17	novel	1703	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	5712	junction_7	851.363252528028	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGGTGTAATGCTTAC	NA	False	NA	-21	True	AATAAA	-17	NA	51446874	51438100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_51440474_51441068_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
m54284U_201205_001509/167774511/ccs	chr2	-	189	1	Intergenic	novelGene_591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAGCTGAGTGGTGAT	9883	False	NA	NA	False	NA	NA	NA	10087241	10087052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_10087100_10087200
m54284U_201205_001509/16779675/ccs	chr2	+	2818	18	NNC	ENSMUSG00000027469.17	novel	4161	18	NA	NA	0	-624	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_16	235.420245606708	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGTGTAAGTGAGAA	2725	False	NA	29	True	AATAAA	-28	NA	152689914	152735950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734053_152734221_152735503
m54284U_201205_001509/167838229/ccs	chr4	+	234	1	Intergenic	novelGene_1835	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTATTAGTGTACAAAAAA	NA	False	NA	NA	False	AAAAAG	-6	NA	44198734	44198968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_44198700_44199000
m54284U_201205_001509/167904052/ccs	chr19	-	2240	1	FSM	ENSMUSG00000096592.2	ENSMUST00000120920.2	522	1	-74	-1644	-74	1644	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATTCAGCCCAGCTCCTG	NA	False	NA	NA	False	AATAAA	-43	NA	40549576	40547336	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_40547300_40549600
m54284U_201205_001509/167905890/ccs	chr17	-	3154	6	NNC	ENSMUSG00000071267.12	novel	3265	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	29.5607848339654	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGACTTGGTTGTTTTCA	NA	False	NA	NA	False	NA	NA	NA	22181445	22145940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_22148471_22149346_22149474_22151973_22152095_22160757_22160832_22172868_22172962_22181236
m54284U_201205_001509/168102751/ccs	chr1	+	2782	6	NIC	ENSMUSG00000026005.16	novel	2692	6	NA	NA	0	-299	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	327.748928297256	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGCAAAAGTTTGTAAGT	NA	False	NA	11	True	NA	NA	NA	66739989	66758665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_66740577_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
m54284U_201205_001509/168166932/ccs	chr18	+	184	1	Intergenic	novelGene_9022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAGAGAGAGAGAGAG	6176	False	NA	NA	False	NA	NA	NA	75494605	75494789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_75494600_75494800
m54284U_201205_001509/168231358/ccs	chr14	+	4508	24	NNC	ENSMUSG00000039367.12	novel	4461	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_21	105.407966110113	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTCATTACTCGCGAC	NA	False	NA	15	True	AATAAA	-18	NA	20724403	20744920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742600_20742787_20742980_20743211_20743302_20743718
m54284U_201205_001509/168298615/ccs	chr12	+	3559	16	NNC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	287	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_13	380.01236237201	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713552	98754012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751547_98751666_98751893_98752001_98752833
m54284U_201205_001509/168361993/ccs	chr11	+	166	1	Intergenic	novelGene_6175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	87326157	87326323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87326200_87326300
m54284U_201205_001509/168362955/ccs	chr18	-	203	1	Intergenic	novelGene_8908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGGGTTGGAAAGATGGA	NA	False	NA	NA	False	NA	NA	NA	36374777	36374574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36374600_36374800
m54284U_201205_001509/168363511/ccs	chr5	-	202	1	Intergenic	novelGene_2923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAGGAAAGGAATGGAG	NA	False	NA	NA	False	NA	NA	NA	125561425	125561223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125561200_125561400
m54284U_201205_001509/16843035/ccs	chr14	-	174	1	Intergenic	novelGene_7437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTTTAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	51393691	51393517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_51393500_51393700
m54284U_201205_001509/168558746/ccs	chr5	-	187	1	Intergenic	novelGene_2655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATCTGCCTTCAGGATA	4718	False	NA	NA	False	NA	NA	NA	90361838	90361651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_90361700_90361800
m54284U_201205_001509/168559601/ccs	chrX	-	4308	7	NIC	ENSMUSG00000034457.11	novel	4752	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	42.8744938421694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTTGTTTATTCCTC	NA	False	NA	-23	True	AATAAA	-14	NA	96420778	96377445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_96381057_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
m54284U_201205_001509/168887047/ccs	chr13	-	852	1	FSM	ENSMUSG00000078915.3	ENSMUST00000109187.3	630	1	-57	-165	-57	165	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACGCCTCTATCAGTTG	NA	False	NA	NA	False	NA	NA	NA	45232660	45231808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_45231800_45232700
m54284U_201205_001509/169018806/ccs	chr19	+	187	1	Intergenic	novelGene_9077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATGTATTTATTTATCAT	1796	False	NA	NA	False	NA	NA	NA	4142101	4142288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4142100_4142300
m54284U_201205_001509/169083880/ccs	chr15	-	2443	14	NIC	ENSMUSG00000001281.11	novel	2683	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_13	12.7794213275663	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGCCTCTACTTTACT	NA	False	NA	-1	True	AATAAA	-14	NA	102140343	102124429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102140285
m54284U_201205_001509/169216834/ccs	chr2	-	191	1	Intergenic	novelGene_1322	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAATAAATAACGAGAC	NA	False	NA	NA	False	NA	NA	NA	180833869	180833678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_180833700_180833900
m54284U_201205_001509/169345307/ccs	chr8	-	180	1	Intergenic	novelGene_4530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGGCTGGGGAGATGGCT	NA	False	NA	NA	False	NA	NA	NA	117991257	117991077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_117991100_117991300
m54284U_201205_001509/169478570/ccs	chrX	-	174	1	Intergenic	novelGene_9679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATAATC	NA	False	NA	NA	False	NA	NA	NA	151174522	151174348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_151174300_151174500
m54284U_201205_001509/169541702/ccs	chr11	+	243	1	Intergenic	novelGene_6243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTGTAACCAATTGAA	NA	False	NA	NA	False	TATAAA	-2	NA	95904847	95905090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95904800_95905100
m54284U_201205_001509/169607892/ccs	chr3	-	184	1	Intergenic	novelGene_1468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTGGAATGTGTGAGG	4020	False	NA	NA	False	NA	NA	NA	87108446	87108262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_87108300_87108400
m54284U_201205_001509/169673175/ccs	chr3	+	5086	5	NIC	ENSMUSG00000047213.15	novel	4929	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	174.069669960048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTTCTTTCCTTTTTA	NA	False	NA	14	True	AATAAA	-16	NA	16237399	16271201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_16237685_16243641_16243728_16257350_16257384_16257989_16259589_16268118
m54284U_201205_001509/169870158/ccs	chr6	-	8638	20	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	37.84485020423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGCAGCCTTCTTGAG	NA	False	NA	NA	False	TATAAA	-16	NA	119825128	119547756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119711041_119711054_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119824837
m54284U_201205_001509/169936566/ccs	chr9	+	173	1	Intergenic	novelGene_5042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACCTGATACATATT	NA	False	NA	NA	False	NA	NA	NA	102078308	102078481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102078300_102078500
m54284U_201205_001509/170067884/ccs	chr6	+	188	2	Antisense	novelGene_ENSMUSG00000002413.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	265	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGTTACCTTATTAAC	NA	False	NA	NA	False	NA	NA	NA	39664742	39742488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_+_39664900_39742457
m54284U_201205_001509/170262625/ccs	chr2	-	173	1	Intergenic	novelGene_969	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAACTATATATTCAA	9727	False	NA	NA	False	NA	NA	NA	104484035	104483862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_104483900_104484000
m54284U_201205_001509/170263365/ccs	chr16	-	193	1	Intergenic	novelGene_8090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAAAGAAAATTTGATTT	NA	False	NA	NA	False	NA	NA	NA	15483339	15483146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_15483100_15483300
m54284U_201205_001509/170395615/ccs	chr14	+	4181	10	NIC	ENSMUSG00000053205.10	novel	1730	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_6	77.5313556640867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGCAATGATTGAGAAG	NA	False	NA	-5	True	ATTAAA	-16	NA	45588678	45614340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605877_45605929_45608475_45608549_45609841_45609936_45610968
m54284U_201205_001509/17040607/ccs	chr7	-	201	1	Intergenic	novelGene_4077	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTGAAGCATGGCTCTC	NA	False	NA	NA	False	NA	NA	NA	125829577	125829376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_125829400_125829600
m54284U_201205_001509/1706170/ccs	chr7	+	2109	5	NNC	ENSMUSG00000030494.14	novel	3508	15	NA	NA	636	0	intron_retention	FALSE	canonical	3	11	junction_1	46.2952481362828	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCTTTTGCTTT	NA	False	NA	26	True	AATAAA	-26	NA	35082625	35091714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35082820_35083393_35083471_35084062_35084210_35084751_35084908_35090179
m54284U_201205_001509/1706529/ccs	chr1	-	187	1	Intergenic	novelGene_205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAGGATGTGGGCATCTA	NA	False	NA	NA	False	NA	NA	NA	75793290	75793103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_75793100_75793300
m54284U_201205_001509/170723110/ccs	chr5	+	4005	22	NIC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	58	junction_1	230.616456727135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_139186455_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201205_001509/17105485/ccs	chr8	+	209	1	Intergenic	novelGene_4428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGCTGGGGGCTGGAG	NA	False	NA	NA	False	NA	NA	NA	105098861	105099070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_105098900_105099100
m54284U_201205_001509/17106551/ccs	chr10	-	4025	13	NIC	ENSMUSG00000020238.15	novel	3118	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	251	junction_4	56.1270260708293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTCCAGGTGTCCTGAG	NA	False	NA	-30	True	AATAAA	-18	NA	81332176	81322290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
m54284U_201205_001509/171115505/ccs	chr12	+	4157	7	NIC	ENSMUSG00000021116.11	novel	3405	8	NA	NA	0	-1689	intron_retention	FALSE	canonical	3	3896	junction_3	288.777740370225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGCTTCTTCCTTCTT	NA	False	NA	24	True	AATAAA	-17	NA	78908858	78932095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78926832_78927905_78928004_78930031_78930176_78931564
m54284U_201205_001509/171573638/ccs	chr5	-	2671	14	NIC	ENSMUSG00000029617.11	novel	1769	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	726	junction_8	71.9292880905066	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCCTGTTGAGTCCT	NA	False	NA	1	True	AATAAA	-22	NA	143951695	143924726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_143925068_143927455_143927584_143928289_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
m54284U_201205_001509/171639811/ccs	chr16	-	2402	15	NIC	ENSMUSG00000022538.21	novel	3180	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_9	171.034964798644	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATATTCTTATTGTC	NA	False	NA	-8	True	ATTAAA	-14	NA	30406410	30380188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30396716_30396816_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
m54284U_201205_001509/171641577/ccs	chr5	-	179	1	FSM	ENSMUSG00000105970.2	ENSMUST00000197656.2	2887	1	1217	1491	1217	-1491	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGAAAAGGTCTTT	NA	False	NA	NA	False	NA	NA	NA	122631754	122631575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_122631600_122631800
m54284U_201205_001509/171706259/ccs	chr14	-	3183	14	NIC	ENSMUSG00000022099.18	novel	4176	15	NA	NA	0	0	intron_retention	FALSE	canonical	2	74	junction_2	38.011209807186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTGTTTCTATCCATGC	NA	False	NA	0	True	ATTAAA	-22	NA	70864494	70841109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_70842295_70842407_70842989_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
m54284U_201205_001509/171706666/ccs	chr18	-	176	1	Intergenic	novelGene_8821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAGAGAGACT	NA	False	NA	NA	False	NA	NA	NA	14835864	14835688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_14835700_14835900
m54284U_201205_001509/171770256/ccs	chr1	+	3317	16	NIC	ENSMUSG00000026289.16	novel	3130	18	NA	NA	0	0	intron_retention	FALSE	canonical	3	160	junction_8	19.8422668955832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTCTTGATTGTCTTT	7245	False	NA	23	True	AATAAA	-32	NA	87683734	87720150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
m54284U_201205_001509/171771036/ccs	chr8	+	4378	1	Genic_Genomic	ENSMUSG00000071796.14	novel	NA	NA	NA	NA	-91	-24860	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	7097	False	NA	NA	False	NA	NA	NA	20143756	20148134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_+_20143800_20148100
m54284U_201205_001509/171772593/ccs	chr2	+	1975	7	NIC	ENSMUSG00000026856.15	novel	2251	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	127.880152225955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGCATACATTACTT	NA	False	NA	8	True	AATAAA	-15	NA	30282441	30290540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30287030_30287160_30287479_30287570_30289153
m54284U_201205_001509/172228616/ccs	chr11	+	246	1	Intergenic	novelGene_5934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGATCACTGAAAGTGC	NA	False	NA	NA	False	AAAAAG	-45	NA	68899544	68899790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68899500_68899800
m54284U_201205_001509/172229370/ccs	chr13	-	4545	12	NNC	ENSMUSG00000032621.9	novel	3934	12	NA	NA	95	817	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	64.1452380948729	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTATTTTTTTGGTC	10014	False	NA	2	True	AATAAA	-22	NA	103911019	103877302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103897032_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
m54284U_201205_001509/172427530/ccs	chr12	-	191	1	Intergenic	novelGene_6851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTCTACAAGTTGGCA	NA	False	NA	NA	False	NA	NA	NA	100851213	100851022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_100851000_100851200
m54284U_201205_001509/172556875/ccs	chr11	-	177	1	Intergenic	novelGene_5809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTTGCCGGGAGTGGT	NA	False	NA	NA	False	NA	NA	NA	51555448	51555271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_51555300_51555400
m54284U_201205_001509/172754217/ccs	chr9	-	869	2	Intergenic	novelGene_5165	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTCTATCGTACAATG	NA	False	NA	NA	False	ATTAAA	-14	NA	124239748	124203002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_124203757_124239633
m54284U_201205_001509/172820790/ccs	chr1	-	205	1	Intergenic	novelGene_520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCACGACCCGTGAATA	NA	False	NA	NA	False	NA	NA	NA	180864736	180864531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_180864500_180864700
m54284U_201205_001509/172949908/ccs	chr9	-	1454	1	Intergenic	novelGene_4666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	8087	False	NA	NA	False	NA	NA	NA	21608374	21606920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21606900_21608400
m54284U_201205_001509/172950488/ccs	chr15	-	171	1	Intergenic	novelGene_7927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAAAAAACAATAAATA	NA	False	NA	NA	False	NA	NA	NA	96863139	96862968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_96863000_96863100
m54284U_201205_001509/172952101/ccs	chr11	-	1542	12	NNC	ENSMUSG00000025580.16	novel	1509	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	26	junction_9	396.99582611208	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGAGTGCAGATCTTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	119190915	119179188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186859_119186960_119188630_119188704_119190653
m54284U_201205_001509/173015939/ccs	chr13	+	178	1	Intergenic	novelGene_7162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTAACAGGATTTC	861	False	NA	NA	False	NA	NA	NA	64371314	64371492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_64371300_64371500
m54284U_201205_001509/173016993/ccs	chr8	+	7243	42	NIC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	38.6050950147074	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725357	71813357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801546_71801578_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812307
m54284U_201205_001509/173080638/ccs	chr17	-	3200	13	NIC	ENSMUSG00000024006.18	novel	3354	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_8	256.327535695164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGGATTTCTTTTAT	NA	False	NA	2	True	AATAAA	-21	NA	29226939	29189853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
m54284U_201205_001509/173213007/ccs	chr11	+	4772	8	NIC	ENSMUSG00000020720.14	novel	1904	11	NA	NA	0	60	intron_retention	FALSE	canonical	3	2673	junction_3	120.226996187399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGTATATGTTGTTTT	NA	False	NA	14	True	ATTAAA	-17	NA	107370309	107388619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107386592_107388349
m54284U_201205_001509/173213973/ccs	chr1	-	177	1	Intergenic	novelGene_134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAACAAAAAACAA	2156	False	NA	NA	False	NA	NA	NA	58802631	58802454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_58802500_58802600
m54284U_201205_001509/173213974/ccs	chr5	+	678	2	NNC	ENSMUSG00000029658.18	novel	2482	23	NA	NA	28330	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATCAGATTCTCGCTGTT	4903	False	NA	NA	False	NA	NA	NA	149533572	149535359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_149533852_149534960
m54284U_201205_001509/173277956/ccs	chr9	-	177	1	Intergenic	novelGene_5002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGATTTTGAACT	NA	False	NA	NA	False	NA	NA	NA	95373050	95372873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_95372900_95373000
m54284U_201205_001509/173476441/ccs	chr1	+	172	1	Intergenic	novelGene_472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGTAGCATCTG	NA	False	NA	NA	False	NA	NA	NA	171009383	171009555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171009400_171009600
m54284U_201205_001509/173540318/ccs	chr9	+	7848	37	NIC	ENSMUSG00000034973.17	novel	9187	38	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_13	4.41893722209758	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTCAAGCCTCATTT	NA	False	NA	18	True	AATACA	-23	NA	86349222	86436683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_86349350_86367465_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383926_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86389556_86389791_86394613_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86436068
m54284U_201205_001509/173935182/ccs	chr10	-	4385	1	NIC	ENSMUSG00000063804.9	novel	1382	4	NA	NA	0	-25428	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	45362491	45358106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_45358100_45362500
m54284U_201205_001509/174131799/ccs	chr11	-	132	1	Intergenic	novelGene_6211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94216754	94216622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_94216600_94216800
m54284U_201205_001509/174197547/ccs	chr6	+	157	1	Intergenic	novelGene_3303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAACAAATA	4844	False	NA	NA	False	NA	NA	NA	66940713	66940870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_66940700_66940900
m54284U_201205_001509/174327836/ccs	chr5	-	5661	1	NIC	ENSMUSG00000029422.16	novel	2270	11	NA	NA	0	-183	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTAAAAAACAAACGTCATA	4323	False	NA	NA	False	TTTAAA	-33	NA	123887475	123881814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_123881800_123887500
m54284U_201205_001509/17433060/ccs	chr4	-	100	1	Intergenic	novelGene_1960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAAATAACAAAAAGACA	NA	False	NA	NA	False	NA	NA	NA	101677224	101677124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_101677100_101677200
m54284U_201205_001509/174457691/ccs	chr6	-	199	1	Intergenic	novelGene_3353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATTCATATGTGTATG	NA	False	NA	NA	False	ATTAAA	-6	NA	85044006	85043807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_85043800_85044000
m54284U_201205_001509/174522840/ccs	chr7	-	3653	15	NIC	ENSMUSG00000007833.16	novel	4074	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	357	junction_10	40.9162908527014	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAGGATGTGGGAACA	9322	False	NA	-8	True	AATAAA	-20	NA	44804008	44791258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44799191_44803815
m54284U_201205_001509/174524480/ccs	chr17	-	1126	6	NNC	ENSMUSG00000050705.16	novel	1193	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	177.750386778763	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGTTTTCACGTCACTT	NA	False	NA	-3	True	AATAAA	-19	NA	36208012	36203568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_36203859_36203931_36204002_36205810_36205945_36206175_36206265_36206562_36206965_36207871
m54284U_201205_001509/174524800/ccs	chr15	-	3978	1	ISM	ENSMUSG00000011960.13	ENSMUST00000169707.8	7397	10	28257	0	354	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTTTGTATGTTCCGT	NA	False	NA	NA	False	AATAAA	-22	NA	98440547	98436569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr15_-_98436600_98440500
m54284U_201205_001509/174655319/ccs	chr15	-	177	1	Intergenic	novelGene_7928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAGGGAGGAA	NA	False	NA	NA	False	NA	NA	NA	96890697	96890520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_96890500_96890700
m54284U_201205_001509/174721304/ccs	chr18	-	177	1	Intergenic	novelGene_8819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	14082937	14082760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_14082800_14082900
m54284U_201205_001509/174917845/ccs	chr5	-	189	1	Intergenic	novelGene_2573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTCCTGCAATAGTTAAAA	NA	False	NA	NA	False	NA	NA	NA	52434485	52434296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_52434300_52434500
m54284U_201205_001509/17498282/ccs	chr8	-	2422	4	NNC	ENSMUSG00000050052.13	novel	373	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_3	126.043202469982	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTAGTGTGTATATTTA	4525	False	NA	-4	True	ATTAAA	-18	NA	14025032	14002007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_14004136_14005719_14005818_14024540_14024730_14025025
m54284U_201205_001509/174983304/ccs	chr3	+	241	1	Intergenic	novelGene_1700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATAGTTTATTTGGG	NA	False	NA	NA	False	NA	NA	NA	137564619	137564860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_137564600_137564900
m54284U_201205_001509/17499218/ccs	chr9	-	3015	18	NIC	ENSMUSG00000034684.13	novel	3395	18	NA	NA	0	88	combination_of_known_junctions	TRUE	canonical	2	8	junction_13	3.78121380705605	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTACCCCTGCAAAGACAG	9834	False	NA	NA	False	NA	NA	NA	107587218	107559528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
m54284U_201205_001509/17499901/ccs	chr7	+	227	1	Intergenic	novelGene_4058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACATAGGTGGTAATCAA	NA	False	NA	53	True	AAAACA	-4	NA	120293542	120293769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_120293500_120293800
m54284U_201205_001509/17500511/ccs	chr18	-	156	1	Intergenic	novelGene_8995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGATTAGTAAAC	NA	False	NA	NA	False	NA	NA	NA	66598841	66598685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_66598700_66598800
m54284U_201205_001509/175114311/ccs	chr12	-	189	1	Intergenic	novelGene_6888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGAGTGTCCTAGCTA	NA	False	NA	NA	False	NA	NA	NA	108731145	108730956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_108731000_108731100
m54284U_201205_001509/175180538/ccs	chr3	+	186	1	Intergenic	novelGene_1573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	193	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATAATGATACATTTT	NA	False	NA	NA	False	NA	NA	NA	95781325	95781511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95781300_95781500
m54284U_201205_001509/175244004/ccs	chr7	+	175	1	Intergenic	novelGene_3928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATGTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	80987219	80987394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_80987200_80987400
m54284U_201205_001509/175244172/ccs	chr16	+	197	1	Intergenic	novelGene_8164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACAAGTAAATCTAAAGGA	1037	False	NA	NA	False	NA	NA	NA	22880012	22880209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_22880000_22880200
m54284U_201205_001509/175311534/ccs	chr3	-	201	1	Intergenic	novelGene_1356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTCTCAGAAAAAGTCT	8006	False	NA	NA	False	NA	NA	NA	19257096	19256895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_19256900_19257100
m54284U_201205_001509/175442509/ccs	chr11	-	172	1	Intergenic	novelGene_6373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAACATATATAAGCAAG	NA	False	NA	NA	False	NA	NA	NA	104657570	104657398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_104657400_104657600
m54284U_201205_001509/175442736/ccs	chr3	-	1734	1	FSM	ENSMUSG00000069008.4	ENSMUST00000091117.4	1252	1	-44	-438	-44	438	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCTCACCTAAGGAATA	NA	False	NA	NA	False	NA	NA	NA	58011712	58009978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_58010000_58011700
m54284U_201205_001509/175506786/ccs	chr2	-	205	1	Intergenic	novelGene_946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATTTTAAAAAAGAAATCC	NA	False	NA	NA	False	NA	NA	NA	92037867	92037662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_92037700_92037900
m54284U_201205_001509/175636673/ccs	chr4	+	182	1	Intergenic	novelGene_2156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCGAGACAGGGTTT	3401	False	NA	NA	False	NA	NA	NA	129477477	129477659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129477500_129477700
m54284U_201205_001509/175637845/ccs	chrX	+	181	1	Intergenic	novelGene_9562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATAGGAACTATTT	NA	False	NA	NA	False	NA	NA	NA	100676805	100676986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100676800_100677000
m54284U_201205_001509/175638123/ccs	chr2	+	3148	1	NIC	ENSMUSG00000054766.14	novel	790	7	NA	NA	290	263	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGCCCTGGCTGTCCT	NA	False	NA	NA	False	NA	NA	NA	29956757	29959905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29956800_29959900
m54284U_201205_001509/17564234/ccs	chr17	-	2160	1	Antisense	novelGene_ENSMUSG00000024085.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	False	NA	NA	False	AATAGA	-14	NA	65022574	65020414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_65020400_65022600
m54284U_201205_001509/175835324/ccs	chr10	-	299	1	Intergenic	novelGene_5301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCTAAGACCTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	56514084	56513785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_56513800_56514100
m54284U_201205_001509/175964425/ccs	chr15	-	178	1	Intergenic	novelGene_7862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATAGTGTCC	NA	False	NA	NA	False	NA	NA	NA	82474620	82474442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_82474400_82474600
m54284U_201205_001509/175964520/ccs	chr8	-	329	1	Intergenic	novelGene_4422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAATTAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96539952	96539623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_96539600_96540000
m54284U_201205_001509/175964678/ccs	chrX	-	2564	8	NIC	ENSMUSG00000002010.18	novel	2080	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	1120	junction_6	118.975044545021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCCTGTTCTTCCCTT	NA	False	NA	-28	True	AATAAA	-19	NA	72830503	72822568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_72822778_72823071_72823133_72823219_72823730_72823818_72823922_72824179_72824637_72824757_72824819_72825282_72826323_72830380
m54284U_201205_001509/175966168/ccs	chr4	-	133	1	Intergenic	novelGene_2152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	129344868	129344735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129344700_129344900
m54284U_201205_001509/176095548/ccs	chr15	-	3146	15	NIC	ENSMUSG00000009733.10	novel	3302	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_10	28.9275132081581	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGGTTCTTGTTGCTG	NA	False	NA	1	True	AATAAA	-22	NA	100449889	100400676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
m54284U_201205_001509/176095600/ccs	chr6	-	156	1	Intergenic	novelGene_3478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATATAAAATAAAA	NA	False	NA	NA	False	AAAACA	-12	NA	122613230	122613074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122613100_122613200
m54284U_201205_001509/176095911/ccs	chr12	+	182	1	Intergenic	novelGene_6668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTAAAAAAAAATAGT	NA	False	NA	NA	False	NA	NA	NA	60033459	60033641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_60033500_60033600
m54284U_201205_001509/176227985/ccs	chr3	-	190	1	Intergenic	novelGene_1568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGGGGAAAGGAAA	4618	False	NA	NA	False	NA	NA	NA	95352612	95352422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_95352400_95352600
m54284U_201205_001509/176292586/ccs	chr13	-	224	1	Intergenic	novelGene_7254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATGAAAAGGGAGACATA	NA	False	NA	NA	False	NA	NA	NA	96901432	96901208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_96901200_96901400
m54284U_201205_001509/17631132/ccs	chr7	+	190	1	Intergenic	novelGene_3612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTTTCTAGGTTGGTGT	437	False	NA	NA	False	NA	NA	NA	3309391	3309581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3309400_3309600
m54284U_201205_001509/176687352/ccs	chr5	-	188	1	Intergenic	novelGene_2739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAGAGAACCAACTC	NA	False	NA	NA	False	NA	NA	NA	108159112	108158924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108158900_108159100
m54284U_201205_001509/176687949/ccs	chr10	-	172	1	Intergenic	novelGene_5276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATTGGAAAATACC	7046	False	NA	NA	False	NA	NA	NA	41470532	41470360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_41470400_41470500
m54284U_201205_001509/176816794/ccs	chrX	-	172	1	Intergenic	novelGene_9574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCCTGAGGAGTGAACAG	4664	False	NA	-1	True	NA	NA	NA	101263559	101263387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_101263400_101263600
m54284U_201205_001509/176948670/ccs	chr9	-	290	1	Intergenic	novelGene_4976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTTATCATGTAAAT	NA	False	NA	NA	False	NA	NA	NA	79993978	79993688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_79993700_79994000
m54284U_201205_001509/176949982/ccs	chr10	-	169	1	Intergenic	novelGene_5602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATATAAATTTAACTTT	5702	False	NA	NA	False	NA	NA	NA	127161291	127161122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127161100_127161300
m54284U_201205_001509/177210715/ccs	chrX	-	160	1	Intergenic	novelGene_9724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAAAGTGCTTGTTTC	NA	False	NA	-1	True	NA	NA	NA	161633753	161633593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161633600_161633800
m54284U_201205_001509/177276394/ccs	chr3	-	225	1	Intergenic	novelGene_1539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCCTACATAGGAGA	NA	False	NA	NA	False	AAAAAG	-32	NA	90329404	90329179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90329200_90329400
m54284U_201205_001509/177407973/ccs	chr9	-	5579	7	NIC	ENSMUSG00000036986.17	novel	4481	9	NA	NA	0	60	intron_retention	FALSE	canonical	3	33	junction_1	123.814938068429	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATATGCGACTCCTA	2151	False	NA	47	True	NA	NA	NA	58157069	58125764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_58127848_58128997_58129149_58136637_58136691_58137110_58137912_58140435_58142217_58154257_58154722_58156823
m54284U_201205_001509/177539933/ccs	chr9	-	175	1	Intergenic	novelGene_5033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAACTAGTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	99476372	99476197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_99476200_99476400
m54284U_201205_001509/177800023/ccs	chr8	-	241	1	Intergenic	novelGene_4613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCAAAGCCACTATGG	NA	False	NA	NA	False	AAAAAG	-17	NA	127716255	127716014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_127716000_127716300
m54284U_201205_001509/177800464/ccs	chr16	+	180	1	Intergenic	novelGene_8074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTTAATAACCCTCTGAT	NA	False	NA	NA	False	NA	NA	NA	13571448	13571628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13571400_13571600
m54284U_201205_001509/177867487/ccs	chr18	-	223	1	Intergenic	novelGene_9027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTCCTCCTCATCCT	NA	False	NA	NA	False	ATTAAA	-27	NA	76989596	76989373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_76989400_76989600
m54284U_201205_001509/177996182/ccs	chr11	-	207	1	Intergenic	novelGene_5825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAGAAGGGCAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	52434903	52434696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_52434700_52434900
m54284U_201205_001509/178061505/ccs	chr11	-	3073	19	NIC	ENSMUSG00000018334.19	novel	2748	13	NA	NA	-64	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_15	11.296372191609	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAAGAGTGGCTCTTGCT	NA	False	NA	NA	False	NA	NA	NA	79037297	78907861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_78908163_78910387_78910522_78911180_78911317_78911507_78911640_78912212_78912347_78916068_78916166_78918242_78918626_78919300_78919350_78919854_78919910_78921906_78921949_78924043_78924210_78927320_78927428_78927512_78927575_78928977_78929062_78931702_78931764_78935670_78936095_78938122_78938271_78965171_78965313_79036880
m54284U_201205_001509/178064213/ccs	chr2	-	183	1	Intergenic	novelGene_1303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGCACAGAAATTGAGC	NA	False	NA	NA	False	NA	NA	NA	176949006	176948823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_176948800_176949000
m54284U_201205_001509/178258834/ccs	chr5	-	218	1	Intergenic	novelGene_2935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGATTTTGTACGATCTGT	NA	False	NA	NA	False	NA	NA	NA	129080408	129080190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129080200_129080400
m54284U_201205_001509/178324376/ccs	chr10	-	3049	22	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	0	-956	combination_of_known_junctions	FALSE	canonical	2	4	junction_14	259.122328162551	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCACTGGGACAACATGA	NA	False	NA	-27	True	AATAAA	-18	NA	77845570	77823736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832593_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
m54284U_201205_001509/178390230/ccs	chr1	+	1688	8	NIC	ENSMUSG00000025949.17	novel	1790	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	36.7101164947923	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATGATAAAAA	NA	False	NA	NA	False	NA	NA	NA	65225841	65248558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_65225993_65229477_65229659_65231303_65231454_65234814_65234934_65235770_65235943_65241874_65242083_65244747_65244838_65247941
m54284U_201205_001509/178717101/ccs	chr11	-	174	1	Intergenic	novelGene_5940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTCCCT	NA	False	NA	NA	False	NA	NA	NA	69073755	69073581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_69073600_69073800
m54284U_201205_001509/178782810/ccs	chr10	+	165	1	Intergenic	novelGene_5522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCGGAGTGAGCCAGGAC	NA	False	NA	NA	False	NA	NA	NA	98234604	98234769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_98234600_98234800
m54284U_201205_001509/17893909/ccs	chr2	+	5917	6	NIC	ENSMUSG00000027479.15	novel	7336	7	NA	NA	74	-4748	intron_retention	FALSE	canonical	3	1002	junction_3	88.8400810445376	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCTTCTGAAATGTGT	NA	False	NA	19	True	AATAAA	-20	NA	153583267	153610482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153603578_153606866_153607020_153608793
m54284U_201205_001509/179112158/ccs	chr1	+	189	1	Intergenic	novelGene_348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACCACCAACAAGACTAAA	NA	False	NA	NA	False	NA	NA	NA	136484456	136484645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_136484500_136484600
m54284U_201205_001509/179177597/ccs	chr7	+	2971	19	NNC	ENSMUSG00000035632.17	novel	2822	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	364.268250091456	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCTCTCCTATCCC	2750	False	NA	NA	False	AATAAA	-23	NA	3648288	3664108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_3648595_3648991_3649065_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656195_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
m54284U_201205_001509/179308052/ccs	chr5	-	179	1	Intergenic	novelGene_2927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTTTTAAAAGTGG	NA	False	NA	NA	False	NA	NA	NA	126814914	126814735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_126814700_126814900
m54284U_201205_001509/179374283/ccs	chr5	-	1850	4	NIC	ENSMUSG00000029524.17	novel	1794	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	34	junction_2	5.31245915016974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAATGTGTGGACTGTG	9379	False	NA	NA	False	AATAAA	-16	NA	115622425	115616071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_115616468_115617660_115618585_115620682_115621178_115622390
m54284U_201205_001509/179437974/ccs	chr19	+	191	1	Intergenic	novelGene_9118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCAAATCCTCAGGGC	NA	False	NA	NA	False	NA	NA	NA	6198249	6198440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6198200_6198400
m54284U_201205_001509/179438118/ccs	chr5	-	646	1	FSM	ENSMUSG00000083833.5	ENSMUST00000118829.2	483	1	-29	-134	-29	134	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGGGTCAGAGAGA	NA	False	NA	NA	False	AATAAA	-34	NA	115940247	115939601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_115939600_115940200
m54284U_201205_001509/179439385/ccs	chr2	-	201	1	Intergenic	novelGene_670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTGGGGAATATCAGG	NA	False	NA	NA	False	NA	NA	NA	29599114	29598913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29598900_29599100
m54284U_201205_001509/179440414/ccs	chr9	+	182	1	Intergenic	novelGene_4709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGAATGAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37285442	37285624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_37285400_37285600
m54284U_201205_001509/179504592/ccs	chr13	-	190	1	Intergenic	novelGene_7233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGGGAAGTGATACACT	NA	False	NA	-34	True	NA	NA	NA	92005635	92005445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_92005400_92005600
m54284U_201205_001509/179569261/ccs	chr7	-	187	1	Intergenic	novelGene_4046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCCACTTAAAACACTGA	5500	False	NA	NA	False	NA	NA	NA	116184147	116183960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_116184000_116184100
m54284U_201205_001509/180028559/ccs	chr11	+	190	1	Intergenic	novelGene_6120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTGGATTTCTATA	NA	False	NA	NA	False	NA	NA	NA	82605064	82605254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_82605100_82605300
m54284U_201205_001509/180030120/ccs	chr11	-	1800	1	FSM	ENSMUSG00000080573.3	ENSMUST00000116923.3	120	1	0	-1680	0	1680	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAACAAGA	NA	False	NA	NA	False	NA	NA	NA	69526345	69524545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69524500_69526300
m54284U_201205_001509/180159138/ccs	chr8	+	171	1	Intergenic	novelGene_4442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGGATGTACTT	NA	False	NA	8	True	NA	NA	NA	106486335	106486506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106486300_106486500
m54284U_201205_001509/180161264/ccs	chr2	-	210	1	Intergenic	novelGene_1205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAATAGAAAAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	163318628	163318418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_163318400_163318600
m54284U_201205_001509/180488055/ccs	chr6	-	502	1	FSM	ENSMUSG00000107176.2	ENSMUST00000202370.2	423	1	-20	-59	-20	59	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTACAGAACTCCAAATAG	NA	False	NA	-1	True	ATTAAA	-26	NA	66852747	66852245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_66852200_66852700
m54284U_201205_001509/18088078/ccs	chr3	-	1463	10	NIC	ENSMUSG00000038975.15	novel	1775	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	357	junction_9	217.717962306997	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGTATATAGCTTT	6116	False	NA	-2	True	AATAAA	-15	NA	153618630	153612925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615700_153615799_153615897_153616004_153616327_153616526_153617561_153617670_153618570
m54284U_201205_001509/18088474/ccs	chrX	-	4629	1	Intergenic	novelGene_9627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACTTAAAATGGGTACAG	NA	False	NA	NA	False	NA	NA	NA	129352827	129348198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_129348200_129352800
m54284U_201205_001509/18156243/ccs	chrX	-	2095	11	NNC	ENSMUSG00000050379.16	novel	4673	11	NA	NA	0	-801	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	21.2388794431345	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAGAGTCTTGATTCATA	NA	False	NA	NA	False	AATAAA	-18	NA	36253144	36179484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205734_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
m54284U_201205_001509/18547959/ccs	chr1	+	176	1	Intergenic	novelGene_542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	188954922	188955098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_188954900_188955100
m54284U_201205_001509/18809779/ccs	chr15	+	3288	1	FSM	ENSMUSG00000092868.3	ENSMUST00000175127.3	82	1	-2241	-965	-2241	965	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTGTTGTCATTTCTG	1570	False	NA	7	True	AATAAA	-19	NA	80821998	80825286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_80822000_80825300
m54284U_201205_001509/18940208/ccs	chr3	+	176	1	Intergenic	novelGene_1579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAAGGTGTGTGTGTG	9805	False	NA	NA	False	NA	NA	NA	96118405	96118581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_96118400_96118600
m54284U_201205_001509/18941248/ccs	chr16	-	190	1	Intergenic	novelGene_8029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGGGGAAGCAAGCCAGT	NA	False	NA	NA	False	NA	NA	NA	4292278	4292088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_4292100_4292300
m54284U_201205_001509/19203797/ccs	chr8	+	1693	15	NIC	ENSMUSG00000049482.17	novel	3066	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_14	37.2460106068079	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACAGTACTTGTGG	8862	False	NA	14	True	AATAAA	-16	NA	123202881	123208483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208359
m54284U_201205_001509/19335205/ccs	chr11	-	169	1	Intergenic	novelGene_6438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	5886	False	NA	NA	False	NA	NA	NA	113704224	113704055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_113704100_113704200
m54284U_201205_001509/19531322/ccs	chr10	+	1007	1	Genic_Genomic	ENSMUSG00000019808.9	novel	NA	NA	NA	NA	10104	628	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATGCTTATAAAGCAAG	NA	False	NA	-9	True	GATAAA	-1	NA	13438741	13439748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_+_13438700_13439700
m54284U_201205_001509/19532227/ccs	chr2	-	2923	4	NIC	ENSMUSG00000039483.11	novel	2792	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	92	junction_3	6.48074069840786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTCTTTGTATGACA	1724	False	NA	-19	True	ATTAAA	-19	NA	30718303	30713108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_30714517_30714652_30715774_30716934_30717111_30718085
m54284U_201205_001509/19660982/ccs	chr1	-	6234	28	NNC	ENSMUSG00000034088.16	novel	6231	28	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_26	112.669077335595	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATGGGACTCAT	NA	False	NA	-10	True	AATAAA	-14	NA	93406537	93333661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368504_93369907_93369973_93406434
m54284U_201205_001509/19662025/ccs	chrX	-	209	1	Intergenic	novelGene_9608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGTCAGTATTATACCC	NA	False	NA	NA	False	NA	NA	NA	105960117	105959908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_105959900_105960100
m54284U_201205_001509/19663637/ccs	chr11	-	1418	1	Intergenic	novelGene_5742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAAAAGCAAA	NA	False	NA	NA	False	NA	NA	NA	23322418	23321000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23321000_23322400
m54284U_201205_001509/19727493/ccs	chr2	-	184	1	Intergenic	novelGene_993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATCTTTTTACTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	118224357	118224173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_118224200_118224400
m54284U_201205_001509/19728266/ccs	chr19	-	219	1	Intergenic	novelGene_9079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATATGAACAGGCCCAGC	8664	False	NA	NA	False	NA	NA	NA	4297628	4297409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4297400_4297600
m54284U_201205_001509/197807/ccs	chr11	-	167	1	Intergenic	novelGene_6204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAAGTACTCT	NA	False	NA	NA	False	NA	NA	NA	90240794	90240627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_90240600_90240800
m54284U_201205_001509/19794707/ccs	chr1	-	207	1	Intergenic	novelGene_121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATGGATATCCGCATG	NA	False	NA	NA	False	NA	NA	NA	52639652	52639445	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_52639400_52639700
m54284U_201205_001509/19858854/ccs	chr15	-	217	1	Intergenic	novelGene_8019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAATAATAATAATAATA	9729	False	NA	NA	False	TTTAAA	-10	NA	103239603	103239386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_103239400_103239600
m54284U_201205_001509/20119682/ccs	chr6	-	1626	1	FSM	ENSMUSG00000096403.3	ENSMUST00000178598.3	843	1	-49	-734	-49	734	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCCGAGGCCTTTGT	2	True	NA	NA	False	AATAAA	-39	NA	7983432	7981806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_7981800_7983400
m54284U_201205_001509/20119879/ccs	chr4	+	4011	7	NNC	ENSMUSG00000084350.2	novel	2413	3	NA	NA	-43763	1183	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	146.064673651396	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTCCATCCGCTACGGC	NA	False	NA	NA	False	NA	NA	NA	145508043	145557695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_145508210_145510590_145510684_145516045_145516128_145541336_145541383_145551778_145551837_145552678_145552806_145554256
m54284U_201205_001509/20251463/ccs	chr1	+	216	1	Intergenic	novelGene_368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAAGGTGCCCATACTTT	NA	False	NA	NA	False	AATAAA	-27	NA	150075318	150075534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_150075300_150075500
m54284U_201205_001509/2032498/ccs	chr7	-	3638	6	NNC	ENSMUSG00000059975.16	novel	1278	7	NA	NA	0	-298	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	21.5276566304835	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCTATTTTCTTTTAGTG	NA	False	NA	-5	True	AATAAA	-17	NA	29653512	29632513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642966_29651138_29651316_29653279
m54284U_201205_001509/2033481/ccs	chr8	-	181	1	Intergenic	novelGene_4199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGTGGTGGCGCAT	4821	False	NA	NA	False	NA	NA	NA	11753435	11753254	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_11753300_11753400
m54284U_201205_001509/20512983/ccs	chr7	-	176	1	Intergenic	novelGene_4117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAGAGAATGATA	NA	False	NA	NA	False	NA	NA	NA	129759803	129759627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_129759600_129759800
m54284U_201205_001509/20513023/ccs	chr9	-	5470	4	NIC	ENSMUSG00000039952.16	novel	4364	4	NA	NA	0	-232	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	177.122054590111	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGCCTCTGACTGTC	NA	False	NA	65	True	AATAAA	-20	NA	108140950	108082064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_108086861_108095211_108095610_108130207_108130357_108140823
m54284U_201205_001509/20578960/ccs	chr11	-	3822	13	NIC	ENSMUSG00000018412.17	novel	5510	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_12	71.1595917638655	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGGAAAAATGAAAAAAA	8169	False	NA	-46	True	NA	NA	NA	104333117	104224370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104332550
m54284U_201205_001509/20710272/ccs	chr1	+	4712	1	ISM	ENSMUSG00000027520.17	ENSMUST00000239483.2	12523	6	36600	0	19127	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTGTTTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	63349023	63353735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_+_63349000_63353700
m54284U_201205_001509/20841219/ccs	chr10	-	179	1	Intergenic	novelGene_5391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAGATTGCAAA	NA	False	NA	NA	False	NA	NA	NA	70074734	70074555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_70074600_70074700
m54284U_201205_001509/20971952/ccs	chr9	+	3287	15	NIC	ENSMUSG00000032185.16	novel	3220	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	1025	junction_5	69.112338305996	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCAGGGTCCAAGAATC	NA	False	NA	40	True	AATAAA	-42	NA	21458218	21500783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498700_21498803_21498882_21499146_21499216_21499344
m54284U_201205_001509/20972124/ccs	chr9	+	3467	11	NIC	ENSMUSG00000025899.15	novel	3603	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	20.4227813972534	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATAATTAAAAATA	-8	True	NA	NA	False	NA	NA	NA	3335477	3386929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_3335749_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
m54284U_201205_001509/2097821/ccs	chr12	+	181	1	Intergenic	novelGene_6608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTCTTGTCTTCTAATCT	NA	False	NA	NA	False	NA	NA	NA	28782493	28782674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_28782500_28782700
m54284U_201205_001509/2099664/ccs	chr5	-	184	1	Intergenic	novelGene_2985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTTTATGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	135866848	135866664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135866700_135866800
m54284U_201205_001509/21038478/ccs	chr7	-	171	1	Intergenic	novelGene_3974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAATTTAAAA	NA	False	NA	NA	False	NA	NA	NA	100179497	100179326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_100179300_100179500
m54284U_201205_001509/21103488/ccs	chr11	-	1993	15	NIC	ENSMUSG00000018651.15	novel	2151	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_10	145.433149661307	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGTGTCAGATAT	NA	False	NA	-4	True	ATTAAA	-17	NA	84020426	83969745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
m54284U_201205_001509/21168142/ccs	chr11	-	180	1	Intergenic	novelGene_5735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATTAACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	23077580	23077400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23077400_23077600
m54284U_201205_001509/21170067/ccs	chr7	+	3978	1	Intergenic	novelGene_3772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGACAAACTCGATTTT	NA	False	NA	23	True	AATAAA	-20	NA	29836200	29840178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29836200_29840200
m54284U_201205_001509/21365123/ccs	chr15	-	189	1	Intergenic	novelGene_8004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGCCAGAAG	NA	False	NA	NA	False	NA	NA	NA	102296214	102296025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102296000_102296200
m54284U_201205_001509/21367173/ccs	chr5	-	3253	1	NIC	ENSMUSG00000034826.15	novel	2352	12	NA	NA	0	-1059	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTCTTATTTTATAGAG	NA	False	NA	NA	False	NA	NA	NA	92583078	92579825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_92579800_92583100
m54284U_201205_001509/21430677/ccs	chr4	-	190	1	Intergenic	novelGene_1904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGCTAAGACTT	NA	False	NA	NA	False	NA	NA	NA	74068291	74068101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_74068100_74068300
m54284U_201205_001509/21497194/ccs	chr4	-	3240	11	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	0	-1252	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	101.038655968891	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTGCTGATGATCATGT	7947	False	NA	NA	False	AGTAAA	-17	NA	129534771	129521127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534748
m54284U_201205_001509/21562790/ccs	chr19	-	190	1	Intergenic	novelGene_9228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTGTAGATCCCTAGC	NA	False	NA	NA	False	NA	NA	NA	35222377	35222187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_35222200_35222400
m54284U_201205_001509/21563218/ccs	chr17	+	181	1	Intergenic	novelGene_8488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAGAATATAG	NA	False	NA	NA	False	NA	NA	NA	29415482	29415663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29415500_29415700
m54284U_201205_001509/2163379/ccs	chr8	+	103	1	Intergenic	novelGene_4426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAACAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	103293408	103293511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_103293400_103293500
m54284U_201205_001509/2165539/ccs	chrX	-	176	1	Intergenic	novelGene_9533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATACATCTATACATTTTT	NA	False	NA	NA	False	NA	NA	NA	92725381	92725205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_92725200_92725400
m54284U_201205_001509/21758400/ccs	chr16	+	6100	31	NIC	ENSMUSG00000041215.17	novel	6112	31	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	46.563886817528	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGAGCTGGAAGCACC	NA	False	NA	16	True	AATAAA	-22	NA	19959816	20051323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975874_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011911_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
m54284U_201205_001509/21758477/ccs	chr2	-	3410	9	NIC	ENSMUSG00000038990.15	novel	2975	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	108	junction_7	11.5697612334914	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCCTTGCTTGTCTCCTT	NA	False	NA	-1	True	AGTAAA	-18	NA	179915289	179900332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
m54284U_201205_001509/21760510/ccs	chr8	-	196	1	Intergenic	novelGene_4427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATCTTCATTCTCATCT	NA	False	NA	NA	False	NA	NA	NA	105001895	105001699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_105001700_105001900
m54284U_201205_001509/22020500/ccs	chr14	-	200	1	Intergenic	novelGene_7329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGGTTTTTATTTTGATA	NA	False	NA	NA	False	NA	NA	NA	4286209	4286009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_4286000_4286200
m54284U_201205_001509/22021796/ccs	chr11	-	1864	9	NIC	ENSMUSG00000020419.12	novel	1343	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	76.6028720088222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTGATAATTTATGT	NA	False	NA	-20	True	AATAAA	-11	NA	4391082	4295813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_4296667_4358589_4358844_4359006_4359159_4362212_4362281_4374270_4374308_4374755_4374820_4377243_4377386_4385001_4385090_4390876
m54284U_201205_001509/22022515/ccs	chr10	+	210	1	Intergenic	novelGene_5214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTAGCTAGAGTTAGAA	4188	False	NA	NA	False	NA	NA	NA	19961308	19961518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_19961300_19961500
m54284U_201205_001509/22086746/ccs	chr7	-	307	1	Intergenic	novelGene_4050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGTAAGTACATTTTTA	NA	False	NA	NA	False	NA	NA	NA	117819882	117819575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_117819600_117819900
m54284U_201205_001509/22153062/ccs	chr9	+	184	1	Intergenic	novelGene_4626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAATTCCTGCTATTAA	NA	False	NA	NA	False	NA	NA	NA	7623743	7623927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_7623700_7623900
m54284U_201205_001509/22218969/ccs	chr4	-	6472	1	Antisense	novelGene_ENSMUSG00000029076.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGACCACCACAGTTAAG	NA	False	NA	NA	False	NA	NA	NA	156086377	156079905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_156079900_156086400
m54284U_201205_001509/22282362/ccs	chr7	+	3821	15	Fusion	ENSMUSG00000005686.18_ENSMUSG00002076727.1	novel	667	3	NA	NA	-126	0	multi-exon	FALSE	canonical	2	4	junction_1	16.4001306615004	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCTTTATTTCTG	NA	False	NA	NA	False	AATAAA	-28	NA	110367286	110411612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_+_110367307_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
m54284U_201205_001509/2229174/ccs	chr2	-	2998	6	NIC	ENSMUSG00000085385.8	novel	1046	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	30.9476978142155	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCGTGAGTTCTT	8327	False	NA	2	True	NA	NA	NA	158203462	158195619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_158197962_158199117_158199184_158201101_158201353_158202446_158202520_158202862_158202991_158203324
m54284U_201205_001509/2229446/ccs	chr18	-	3040	7	NIC	ENSMUSG00000044906.7	novel	2291	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	77.1463256127961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTTGTTACGTCTCCT	NA	False	NA	-2	True	AATAAA	-18	NA	70605575	70585282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_70586460_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
m54284U_201205_001509/2231075/ccs	chr5	-	181	1	Intergenic	novelGene_2646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATAATTTAAACTT	NA	False	NA	NA	False	NA	NA	NA	86376780	86376599	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_86376600_86376800
m54284U_201205_001509/22610557/ccs	chr5	-	175	1	FSM	ENSMUSG00000106717.2	ENSMUST00000200853.2	3972	1	360	3437	360	-3437	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACCTAAATTTTT	NA	False	NA	NA	False	NA	NA	NA	31371299	31371124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_31371100_31371300
m54284U_201205_001509/22611918/ccs	chr18	+	5089	22	NIC	ENSMUSG00000024498.17	novel	3526	23	NA	NA	0	51	intron_retention	FALSE	canonical	3	105	junction_20	187.379760388294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTTTTTTATTTTTTC	NA	False	NA	20	True	AATATA	-18	NA	42644565	42708670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707224_42707319_42707582
m54284U_201205_001509/22676288/ccs	chr4	+	267	1	Intergenic	novelGene_2020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAACAACATTTAATTGAC	NA	False	NA	NA	False	NA	NA	NA	116487096	116487363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116487100_116487400
m54284U_201205_001509/22742930/ccs	chr19	-	178	1	Intergenic	novelGene_9144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAAATGTTATTCTTTA	8110	False	NA	NA	False	NA	NA	NA	7431553	7431375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7431400_7431600
m54284U_201205_001509/22874634/ccs	chr11	+	2121	9	NIC	ENSMUSG00000017715.12	novel	2197	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_7	107.743619300634	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGTTGCTCAAGTGAT	NA	False	NA	16	True	AATAAA	-14	NA	117877710	117914837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117910432_117910559_117914230
m54284U_201205_001509/2294172/ccs	chr5	-	145	1	Intergenic	novelGene_2989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAAATATTT	NA	False	NA	NA	False	NA	NA	NA	136021588	136021443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_136021400_136021600
m54284U_201205_001509/2295497/ccs	chr6	-	181	1	Intergenic	novelGene_3216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGAGGAATCACCAAAC	NA	False	NA	NA	False	NA	NA	NA	38647901	38647720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38647700_38647900
m54284U_201205_001509/2295849/ccs	chr4	-	5202	21	NNC	ENSMUSG00000039158.12	novel	5387	22	NA	NA	-7359	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	10.4808158079417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGGCTGTGCTGTGT	NA	False	NA	NA	False	AATAAA	-38	NA	63328950	63285361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_63286524_63288708_63288890_63289128_63289249_63291559_63291707_63292233_63292350_63292593_63292768_63295067_63295231_63295888_63296098_63296806_63296914_63297391_63297612_63298124_63298326_63298435_63298600_63299964_63300167_63300579_63300708_63302123_63302184_63304466_63304622_63305233_63305391_63310368_63310444_63312822_63313872_63316111_63316477_63328903
m54284U_201205_001509/2296121/ccs	chr14	-	266	1	Antisense	novelGene_ENSMUSG00000039599.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAAGGGTTTGTCTGGCT	NA	False	NA	NA	False	NA	NA	NA	20421491	20421225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_-_20421200_20421500
m54284U_201205_001509/23004434/ccs	chr7	-	2379	18	NIC	ENSMUSG00000078762.11	novel	2187	19	NA	NA	0	0	intron_retention	FALSE	canonical	3	112	junction_12	35.9706724062312	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGCCCAGTTTTATCAA	NA	False	NA	-4	True	AATAAA	-15	NA	30364419	30353135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
m54284U_201205_001509/23069302/ccs	chr11	-	3585	16	NIC	ENSMUSG00000039703.16	novel	4121	17	NA	NA	0	-423	combination_of_known_splicesites	FALSE	canonical	2	2	junction_14	112.342808700275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGAGTTACTCTT	NA	False	NA	-4	True	AAGAAA	-20	NA	120328534	120271618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120323873_120323955_120328324
m54284U_201205_001509/23071214/ccs	chr9	+	2202	9	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	220.716305469261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1147	False	NA	64	True	NA	NA	NA	108394285	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108394440_108405787_108406118_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
m54284U_201205_001509/23136414/ccs	chr2	-	1427	4	NIC	ENSMUSG00000017307.17	novel	1152	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	55	junction_3	137.239450110625	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCTGACCTTTAATAGAA	8226	False	NA	-1	True	AATAAA	-19	NA	164646742	164634687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_164634931_164636904_164637730_164641639_164641866_164646609
m54284U_201205_001509/23200714/ccs	chr11	+	2994	14	NIC	ENSMUSG00000018167.11	novel	2170	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	120	junction_11	11.8071285257538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGATGGTGCATTCCT	938	False	NA	11	True	AATAAA	-14	NA	98249256	98271938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98270893_98271283
m54284U_201205_001509/23201176/ccs	chr2	+	257	1	Intergenic	novelGene_1266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAATAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	168633585	168633842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168633600_168633800
m54284U_201205_001509/23267916/ccs	chr15	+	195	1	Intergenic	novelGene_7857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAAAATCAGTGAAATG	NA	False	NA	NA	False	NA	NA	NA	81962485	81962680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81962500_81962700
m54284U_201205_001509/23397131/ccs	chr9	-	180	1	Intergenic	novelGene_5107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTAAAAAAAAGTAAAAGA	NA	False	NA	NA	False	NA	NA	NA	110063529	110063349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_110063300_110063500
m54284U_201205_001509/2360072/ccs	chrX	-	231	1	Intergenic	novelGene_9682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTAATTTTCCTAATC	NA	False	NA	NA	False	AAAAAG	-31	NA	151994161	151993930	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_151993900_151994200
m54284U_201205_001509/2361269/ccs	chr19	-	201	1	Intergenic	novelGene_9203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	NA	False	NA	NA	False	NA	NA	NA	29503211	29503010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_29503000_29503200
m54284U_201205_001509/2361710/ccs	chr14	+	1232	10	NNC	ENSMUSG00000021771.15	novel	1954	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_8	710.149280081308	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGTGTGCATGTTTGTT	NA	False	NA	22	True	AATAGA	-18	NA	21881633	21895587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890573_21893949_21894008_21895213
m54284U_201205_001509/23660579/ccs	chr11	-	5797	8	NIC	ENSMUSG00000001036.18	novel	4317	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	292	junction_2	24.0645390734235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTTTGGCTGTGTC	NA	False	NA	-1	True	TATAAA	-24	NA	61470513	61408075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61426210_61436975_61437738_61470392
m54284U_201205_001509/23790696/ccs	chr2	+	218	1	Intergenic	novelGene_1013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGCTAGAAAGGAAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	119926240	119926458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119926200_119926500
m54284U_201205_001509/23790726/ccs	chr7	-	182	1	Intergenic	novelGene_3622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACTAAACTAAAATTGC	NA	False	NA	NA	False	NA	NA	NA	3595851	3595669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3595700_3595900
m54284U_201205_001509/23855234/ccs	chr4	+	193	1	Intergenic	novelGene_2211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACAGTAATGATGTGCAC	1752	False	NA	NA	False	NA	NA	NA	132733586	132733779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132733600_132733800
m54284U_201205_001509/23921246/ccs	chr7	-	186	1	Intergenic	novelGene_3791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGATGGAGGGAGG	116	False	NA	NA	False	NA	NA	NA	34952873	34952687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_34952700_34952900
m54284U_201205_001509/24052831/ccs	chr9	-	177	1	Intergenic	novelGene_4670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATACATACAGGCAA	788	False	NA	NA	False	NA	NA	NA	22035624	22035447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_22035400_22035600
m54284U_201205_001509/24054148/ccs	chr7	-	175	1	Intergenic	novelGene_3940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTAAAAAAAAATTCCT	4850	False	NA	NA	False	NA	NA	NA	84674523	84674348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_84674300_84674500
m54284U_201205_001509/24054444/ccs	chr15	-	5953	29	NIC	ENSMUSG00000022377.17	novel	4535	30	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_27	29.1131457438395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCTGACATCAGGCCA	NA	False	NA	-8	True	AATAAA	-20	NA	64254673	63958705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
m54284U_201205_001509/24119054/ccs	chr18	-	193	1	Intergenic	novelGene_8895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGAGGAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	35779686	35779493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35779500_35779700
m54284U_201205_001509/24119224/ccs	chr1	+	1712	1	Intergenic	novelGene_553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTGTGAAAATACACT	3138	False	NA	NA	False	NA	NA	NA	191124201	191125913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_191124200_191125900
m54284U_201205_001509/24119893/ccs	chr18	-	180	1	Intergenic	novelGene_8797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAAATAAGGAACAGA	NA	False	NA	NA	False	NA	NA	NA	5345363	5345183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_5345200_5345400
m54284U_201205_001509/24183223/ccs	chr1	+	184	1	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAAAAGTTATCATG	NA	False	NA	NA	False	AATAAA	-4	NA	14734891	14735075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_14734900_14735100
m54284U_201205_001509/24184635/ccs	chr14	-	170	1	Intergenic	novelGene_7376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGAGAGAGAGCTTA	1505	False	NA	NA	False	NA	NA	NA	27269920	27269750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_27269800_27269900
m54284U_201205_001509/24248503/ccs	chr16	-	3917	15	NIC	ENSMUSG00000052459.14	novel	4234	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_14	123.339687738491	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTTCCCTTTTTATT	NA	False	NA	0	True	AATAAA	-18	NA	43959381	43905764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959354
m54284U_201205_001509/24250334/ccs	chr10	-	1185	1	Intergenic	novelGene_5236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAAAACAACACTGAGGT	2150	False	NA	NA	False	NA	NA	NA	25244734	25243549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_25243500_25244700
m54284U_201205_001509/2425654/ccs	chr12	-	2908	10	NIC	ENSMUSG00000021270.14	novel	2852	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	11114	junction_6	1599.64232113168	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGAATGTGTCTTTTCT	NA	False	NA	-5	True	GATAAA	-21	NA	110662723	110657461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_110658084_110658547_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
m54284U_201205_001509/2426276/ccs	chr1	+	178	1	Intergenic	novelGene_554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTTCCTCAGTG	NA	False	NA	NA	False	NA	NA	NA	191165740	191165918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_191165700_191165900
m54284U_201205_001509/24446813/ccs	chr11	+	3045	1	Genic_Genomic	ENSMUSG00000035530.14	novel	NA	NA	NA	NA	102	935	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACAGTAGTACACAGTA	4059	False	NA	NA	False	NA	NA	NA	100210812	100213857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_100210800_100213900
m54284U_201205_001509/24447066/ccs	chr13	+	198	1	Intergenic	novelGene_7262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACCAAACAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	97287759	97287957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97287800_97288000
m54284U_201205_001509/24644250/ccs	chr5	+	4144	12	NNC	ENSMUSG00000051674.16	novel	1243	8	NA	NA	-8203	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	55.4682546392734	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGGGTCTTTGTACTC	8139	False	NA	19	True	AATAAA	-30	NA	73660007	73718137	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_73660112_73668228_73668300_73668469_73668510_73677087_73677167_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
m54284U_201205_001509/24707340/ccs	chr12	+	178	1	Intergenic	novelGene_6575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAACACACAGAATTA	1644	False	NA	NA	False	NA	NA	NA	17366588	17366766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_17366600_17366800
m54284U_201205_001509/24838363/ccs	chr9	-	2106	1	Intergenic	novelGene_5146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCAGTGACCTGTCA	NA	False	NA	NA	False	NA	NA	NA	119297276	119295170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_119295200_119297300
m54284U_201205_001509/24904052/ccs	chr18	+	160	1	Intergenic	novelGene_8882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAATCTTAAAACAG	NA	False	NA	NA	False	NA	NA	NA	35186444	35186604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35186400_35186600
m54284U_201205_001509/24904333/ccs	chr18	+	2992	10	NIC	ENSMUSG00000024590.9	novel	2843	11	NA	NA	-254	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	412.601173526036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTCTTTTTAACCC	NA	False	NA	20	True	AATAAA	-19	NA	56840630	56886496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56881048_56881169_56882770_56882882_56885678
m54284U_201205_001509/2490549/ccs	chr9	+	231	1	Intergenic	novelGene_5121	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGATTTATTTATTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	113523846	113524077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_113523800_113524100
m54284U_201205_001509/25035360/ccs	chr6	+	234	1	Intergenic	novelGene_3409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTGACTAAGACAAGAGAG	NA	False	NA	NA	False	NA	NA	NA	99394280	99394514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_99394300_99394500
m54284U_201205_001509/25298764/ccs	chr7	+	174	1	Intergenic	novelGene_3832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGGTGAATGTCTG	NA	False	NA	NA	False	NA	NA	NA	44275741	44275915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_44275700_44275900
m54284U_201205_001509/25364845/ccs	chr6	-	175	1	Intergenic	novelGene_3357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTGCATCCTGC	7150	False	NA	NA	False	NA	NA	NA	85755338	85755163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_85755200_85755300
m54284U_201205_001509/25493720/ccs	chr11	-	4921	10	NIC	ENSMUSG00000006930.16	novel	3316	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	486	junction_1	46.8925748946133	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCTCAGTTGTGTT	2007	False	NA	-2	True	AATAAA	-17	NA	100246954	100238152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
m54284U_201205_001509/25493980/ccs	chrX	-	183	1	Intergenic	novelGene_9567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTGTGGCAGGTCATA	NA	False	NA	NA	False	NA	NA	NA	100773073	100772890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_100772900_100773100
m54284U_201205_001509/25624617/ccs	chr3	+	3888	18	NIC	ENSMUSG00000038777.20	novel	3936	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	28.2300240179735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGCAAGTCTTGTCCT	NA	False	NA	19	True	AATAAA	-28	NA	95067767	95081335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_95068024_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95075038_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
m54284U_201205_001509/25823402/ccs	chr4	+	318	1	Intergenic	novelGene_2141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAACTATCAAAAAAAGGA	817	False	NA	NA	False	NA	NA	NA	129072980	129073298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129073000_129073300
m54284U_201205_001509/26150368/ccs	chr11	+	3937	1	NIC	ENSMUSG00000071866.13	novel	1170	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGAACTGTTTGTCCTT	NA	False	NA	-11	True	AATAAA	-6	NA	6365867	6369804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_6365900_6369800
m54284U_201205_001509/2621532/ccs	chr9	+	187	1	Intergenic	novelGene_5144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGGAAGGAAGGAAGGAAG	NA	False	NA	NA	False	NA	NA	NA	119152615	119152802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_119152600_119152800
m54284U_201205_001509/262266/ccs	chr5	+	183	1	Intergenic	novelGene_3009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAGAAAAGGCAAGA	NA	False	NA	NA	False	NA	NA	NA	139296798	139296981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_139296800_139297000
m54284U_201205_001509/26282698/ccs	chr18	-	186	1	Intergenic	novelGene_8866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAACAGAAGGAATTCTG	NA	False	NA	NA	False	NA	NA	NA	34277735	34277549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34277500_34277700
m54284U_201205_001509/26346561/ccs	chr5	-	176	1	Intergenic	novelGene_2879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGAAGAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	123226459	123226283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123226300_123226500
m54284U_201205_001509/26413276/ccs	chr3	-	175	1	Intergenic	novelGene_1464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAAACAGAGATTGTAT	NA	False	NA	NA	False	NA	NA	NA	86571463	86571288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_86571300_86571500
m54284U_201205_001509/26607762/ccs	chr2	-	223	1	Intergenic	novelGene_900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAAATTAAACAAGTAAGC	NA	False	NA	NA	False	TATAAA	-12	NA	84531659	84531436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_84531400_84531700
m54284U_201205_001509/26609053/ccs	chr2	-	190	1	Intergenic	novelGene_1218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGACATTTGT	NA	False	NA	NA	False	NA	NA	NA	164715328	164715138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_164715100_164715300
m54284U_201205_001509/26740062/ccs	chr2	+	2284	12	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	132	junction_7	957.813444800877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118779_130118951_130119235_130119395_130119545_130119768_130119891_130120075_130120211_130120332_130120491_130120816
m54284U_201205_001509/26806420/ccs	chr2	-	156	1	Intergenic	novelGene_692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	30988009	30987853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_30987900_30988000
m54284U_201205_001509/26871930/ccs	chr1	-	185	1	Intergenic	novelGene_369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTCTTAGAAGTTTGT	NA	False	NA	NA	False	NA	NA	NA	151299834	151299649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_151299600_151299800
m54284U_201205_001509/2689043/ccs	chr4	+	1711	3	NIC	ENSMUSG00000035212.15	novel	1898	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	296.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGTTGCATTTCATAAA	8215	False	NA	8	True	AATAAA	-20	NA	101504914	101516561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_101505023_101509595_101509672_101515034
m54284U_201205_001509/27133736/ccs	chrX	+	4349	8	NNC	ENSMUSG00000031154.16	novel	4259	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	37	junction_1	155.005859007105	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTATCTTGTTTGTGTGT	NA	False	NA	16	True	AATAAA	-25	NA	7708069	7742859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_7708950_7722545_7722637_7733753_7733819_7733905_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
m54284U_201205_001509/27134556/ccs	chr9	-	197	1	Intergenic	novelGene_4771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGCAGACAAAACCTGGA	6869	False	NA	NA	False	NA	NA	NA	53603479	53603282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_53603300_53603500
m54284U_201205_001509/27263336/ccs	chr10	-	5393	13	NIC	ENSMUSG00000047417.19	novel	5250	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	335	junction_10	33.1984772073794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTTCATAGTGTGTG	9421	False	NA	-5	True	AATAAA	-14	NA	80397394	80377497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_80378316_80378398_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80386900_80397097
m54284U_201205_001509/27263842/ccs	chr2	+	2806	13	NIC	ENSMUSG00000027247.17	novel	2866	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	100.692980832275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGGCTGTTTAGGAAG	NA	False	NA	NA	False	AATAAA	-19	NA	91480566	91502671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_91480598_91484390_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
m54284U_201205_001509/27329685/ccs	chr8	+	776	5	NIC	ENSMUSG00000031848.16	novel	925	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	230	junction_3	1354.46250870964	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCTGTTCTTCTGCCTA	NA	False	NA	20	True	AATAAA	-20	NA	71126028	71131402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71126108_71129204_71129247_71130427_71130509_71130603_71130785_71131009
m54284U_201205_001509/27396661/ccs	chr2	-	1951	14	NIC	ENSMUSG00000089917.8	novel	1849	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	84	junction_13	13.7819022055146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCGTGTGGCAGAATGTA	4547	False	NA	-2	True	AATAAA	-20	NA	181223801	181210944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_181211184_181211260_181211418_181211488_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214262_181214280_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
m54284U_201205_001509/27527683/ccs	chr11	-	183	1	Intergenic	novelGene_5872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAATGCCCCTAAAACC	NA	False	NA	NA	False	NA	NA	NA	59247137	59246954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_59247000_59247100
m54284U_201205_001509/2752927/ccs	chr12	-	2394	25	NIC	ENSMUSG00000037149.11	novel	4842	26	NA	NA	0	-2334	combination_of_known_splicesites	FALSE	canonical	2	5	junction_23	442.537349333992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGCTTGTGTC	NA	False	NA	-11	True	AATAAA	-14	NA	13299164	13269307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13296026_13296079_13299104
m54284U_201205_001509/2753135/ccs	chr2	-	161	1	Intergenic	novelGene_633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	25149399	25149238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_25149200_25149400
m54284U_201205_001509/27591458/ccs	chr19	+	183	1	Intergenic	novelGene_9293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAGACTGCCTCAAAGA	NA	False	NA	NA	False	NA	NA	NA	45348576	45348759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45348600_45348800
m54284U_201205_001509/27592172/ccs	chr9	+	704	1	FSM	ENSMUSG00000074280.7	ENSMUST00000098689.7	409	1	-47	-248	-47	248	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTCCAGCAATGTTCA	NA	False	NA	NA	False	NA	NA	NA	57391198	57391902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_57391200_57391900
m54284U_201205_001509/27657696/ccs	chr2	-	212	1	Intergenic	novelGene_1181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTGGGGAGGCCAAGCAA	NA	False	NA	NA	False	NA	NA	NA	156593761	156593549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156593500_156593800
m54284U_201205_001509/27787598/ccs	chr10	-	186	1	Intergenic	novelGene_5196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACGTCAAGGAAAGAGCTA	NA	False	NA	NA	False	NA	NA	NA	12673854	12673668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_12673700_12673900
m54284U_201205_001509/27921041/ccs	chrX	-	165	1	Intergenic	novelGene_9634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATTAGAAGTGGT	NA	False	NA	NA	False	NA	NA	NA	134906825	134906660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_134906700_134906800
m54284U_201205_001509/27986406/ccs	chr2	-	5553	31	NIC	ENSMUSG00000026924.18	novel	8797	31	NA	NA	91	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_30	40.2706951627221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTATGGCTTCCTTTGTG	NA	False	NA	-2	True	AATAAA	-25	NA	26329676	26299444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26328831_26329526
m54284U_201205_001509/28115928/ccs	chr4	+	1271	8	NNC	ENSMUSG00000028937.15	novel	1457	9	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	161.236041952442	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTAGGTGGTCATTTGTC	NA	False	NA	20	True	AATAAA	-25	NA	152262675	152356312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_152262798_152291220_152291339_152302192_152302350_152314243_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
m54284U_201205_001509/2818851/ccs	chr1	+	2290	13	NIC	ENSMUSG00000038305.16	novel	3929	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	16.9777223312067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTGCTCTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	57814019	57986124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
m54284U_201205_001509/28377921/ccs	chr11	-	2889	20	NNC	ENSMUSG00000025572.19	novel	2865	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_13	75.7136682296315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGCTTCAGGATG	NA	False	NA	-4	True	ATTAAA	-15	NA	117671484	117656813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666874_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
m54284U_201205_001509/28444288/ccs	chr2	-	181	1	Intergenic	novelGene_940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGGATTCAACAAAA	6153	False	NA	NA	False	NA	NA	NA	91643874	91643693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91643700_91643900
m54284U_201205_001509/28573863/ccs	chr17	+	176	1	Intergenic	novelGene_8588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATAGACTCTTTTCAAG	NA	False	NA	NA	False	NA	NA	NA	37400424	37400600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_37400400_37400600
m54284U_201205_001509/28838460/ccs	chr1	-	6541	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-9550	0	at_least_one_novel_splicesite	FALSE	canonical	3	100	junction_41	284.074616719563	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	NA	False	NA	17	True	NA	NA	NA	84827787	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84827643
m54284U_201205_001509/28901585/ccs	chr3	-	2747	1	Intergenic	novelGene_1398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTGGCTGCCAAATCTA	5757	False	NA	NA	False	NA	NA	NA	51328531	51325784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_51325800_51328500
m54284U_201205_001509/28967132/ccs	chr4	-	5249	1	Intergenic	novelGene_2095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	124252214	124246965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_124247000_124252200
m54284U_201205_001509/29032571/ccs	chr2	-	225	1	Intergenic	novelGene_1331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGATGGTTCCAGAACA	NA	False	NA	NA	False	NA	NA	NA	181252024	181251799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181251800_181252000
m54284U_201205_001509/29166088/ccs	chr2	-	1524	6	NIC	ENSMUSG00000027404.17	novel	1161	7	NA	NA	0	0	intron_retention	TRUE	canonical	3	3295	junction_3	276.893770244114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCATTTGTCTTCTGA	NA	False	NA	-11	True	AATAAA	-28	NA	130021254	130013554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_130013864_130014522_130014649_130014955_130015680_130017249_130017362_130018934_130019087_130021153
m54284U_201205_001509/29297019/ccs	chr7	+	191	1	Intergenic	novelGene_3692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	2706	False	NA	NA	False	NA	NA	NA	19520611	19520802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_19520600_19520800
m54284U_201205_001509/29491273/ccs	chr1	-	2097	1	Antisense	novelGene_ENSMUSG00000026436.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAACAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131946161	131944064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_131944100_131946200
m54284U_201205_001509/2949996/ccs	chr1	-	194	1	Intergenic	novelGene_198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTTTAGGCTGGATGA	6666	False	NA	NA	False	NA	NA	NA	75271782	75271588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_75271600_75271800
m54284U_201205_001509/2951469/ccs	chr6	-	239	1	Intergenic	novelGene_3485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGCTGTCTTTCTTCC	650	False	NA	53	True	NA	NA	NA	122698414	122698175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122698200_122698400
m54284U_201205_001509/29558303/ccs	chrX	-	191	1	Intergenic	novelGene_9700	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCCAAAAAGAAAATAT	NA	False	NA	NA	False	NA	NA	NA	158219921	158219730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_158219700_158219900
m54284U_201205_001509/29558342/ccs	chr7	-	251	1	Intergenic	novelGene_3998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103907029	103906778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_103906800_103907000
m54284U_201205_001509/29622846/ccs	chr7	-	3999	16	NIC	ENSMUSG00000006019.16	novel	3880	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	51	junction_15	13.7737270030865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTAATTGTTTTATTTA	8437	False	NA	-4	True	AAGAAA	-42	NA	15955962	15931071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
m54284U_201205_001509/29755587/ccs	chr16	+	207	1	Intergenic	novelGene_8036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGAACGTAAGCACAAG	NA	False	NA	NA	False	NA	NA	NA	4860880	4861087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_4860900_4861100
m54284U_201205_001509/29819121/ccs	chr13	-	2062	1	NIC	ENSMUSG00000034789.9	novel	1806	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTGTGCACTGGGTG	6441	False	NA	-22	True	AATAAA	-14	NA	55469759	55467697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_55467700_55469800
m54284U_201205_001509/29887277/ccs	chr5	+	199	1	Intergenic	novelGene_2760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAATTCCAC	6373	False	NA	NA	False	NA	NA	NA	110187404	110187603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110187400_110187600
m54284U_201205_001509/29950911/ccs	chr6	-	174	1	Intergenic	novelGene_3172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAGAAAATTA	NA	False	NA	NA	False	NA	NA	NA	35153913	35153739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_35153700_35153900
m54284U_201205_001509/30082219/ccs	chr8	+	177	1	Intergenic	novelGene_4361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGATAGCAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	81724191	81724368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_81724200_81724400
m54284U_201205_001509/30083726/ccs	chr12	-	176	1	Intergenic	novelGene_6919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGGAAAGAAAGTT	NA	False	NA	NA	False	NA	NA	NA	111521514	111521338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111521300_111521500
m54284U_201205_001509/30148524/ccs	chr10	-	173	1	Intergenic	novelGene_5177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	4351548	4351375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_4351400_4351500
m54284U_201205_001509/30476888/ccs	chr11	-	176	1	Intergenic	novelGene_5860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAACAACAACAATAACAA	6803	False	NA	NA	False	NA	NA	NA	57794670	57794494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57794500_57794700
m54284U_201205_001509/30541279/ccs	chr17	-	185	1	Intergenic	novelGene_8430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGGCACAGTATTAAG	NA	False	NA	NA	False	NA	NA	NA	26389629	26389444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26389400_26389600
m54284U_201205_001509/30802250/ccs	chr18	-	197	1	Intergenic	novelGene_8922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTAGAACAATGTTAG	NA	False	NA	NA	False	NA	NA	NA	38360864	38360667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_38360700_38360900
m54284U_201205_001509/30867984/ccs	chr5	-	201	1	Intergenic	novelGene_2527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGGTGGCAGTTCTA	NA	False	NA	NA	False	NA	NA	NA	32790413	32790212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_32790200_32790400
m54284U_201205_001509/30935476/ccs	chr6	+	186	1	Intergenic	novelGene_3356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTAAAAAAAACCTAGC	NA	False	NA	NA	False	NA	NA	NA	85511277	85511463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_85511300_85511500
m54284U_201205_001509/30998962/ccs	chr16	+	120	1	Intergenic	novelGene_8108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTATGACAAAACTTAA	NA	False	NA	NA	False	NA	NA	NA	17542218	17542338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17542200_17542300
m54284U_201205_001509/31066432/ccs	chr12	+	1780	9	NIC	ENSMUSG00000021268.18	novel	1988	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_3	166.96140085361	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGGGTGTGCTACT	NA	False	NA	NA	False	ACTAAA	-1	NA	109506883	109538160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_109506983_109509582_109509689_109509909_109510626_109510830_109510925_109512312_109512426_109515913_109515988_109516087_109516246_109524670_109524755_109537824
m54284U_201205_001509/31132423/ccs	chr3	+	182	1	Intergenic	novelGene_1411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAATAAAATAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	54529736	54529918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_54529700_54529900
m54284U_201205_001509/31196706/ccs	chr1	-	2582	5	NIC	ENSMUSG00000026095.16	novel	983	6	NA	NA	85	0	intron_retention	FALSE	canonical	3	502	junction_1	48.7410248148313	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGGGTGTAGTAGTT	NA	False	NA	-30	True	AATAAA	-13	NA	53391826	53383803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_53384139_53385738_53387718_53389145_53389222_53390038_53390093_53391688
m54284U_201205_001509/31459560/ccs	chr19	-	177	1	Intergenic	novelGene_9233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	36833146	36832969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_36833000_36833100
m54284U_201205_001509/3146309/ccs	chr8	+	912	5	NIC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	0	intron_retention	FALSE	canonical	3	17818	junction_4	2821.04696876886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829152	123831983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_123829185_123829391_123829502_123829583_123830096_123830636_123830694_123831782
m54284U_201205_001509/3147590/ccs	chr9	-	3293	1	Antisense	novelGene_ENSMUSG00000045594.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	CATAAA	-7	NA	114274300	114271007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_114271000_114274300
m54284U_201205_001509/31656708/ccs	chr10	+	2632	19	NNC	ENSMUSG00000044005.14	novel	2573	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	31.0851081808844	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTTATTTTATATTTT	NA	False	NA	13	True	AATAAA	-19	NA	128030505	128045811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_128030925_128030961_128031050_128035050_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
m54284U_201205_001509/32113084/ccs	chr2	+	201	1	Intergenic	novelGene_909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACCTATTCAGTACTAAT	NA	False	NA	NA	False	NA	NA	NA	87551964	87552165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_87552000_87552200
m54284U_201205_001509/32113174/ccs	chr4	-	173	1	Intergenic	novelGene_1844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAAGACAGTG	NA	False	NA	NA	False	NA	NA	NA	45054058	45053885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_45053900_45054100
m54284U_201205_001509/32114661/ccs	chr10	-	207	1	Intergenic	novelGene_5638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAGCTAGTAACTTTAC	NA	False	NA	NA	False	NA	NA	NA	128597153	128596946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128596900_128597200
m54284U_201205_001509/3212561/ccs	chr6	-	5252	12	NNC	ENSMUSG00000014550.15	novel	5334	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_7	35.6024885377784	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGTGCTTAAAACGT	NA	False	NA	1	True	ATTAAA	-24	NA	92191830	92163692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178609_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
m54284U_201205_001509/3213644/ccs	chr7	-	2061	5	NIC	ENSMUSG00000006310.11	novel	1775	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_4	17.5267652463311	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAGTCCAGACTTTTCC	NA	False	NA	0	True	AATAAA	-20	NA	30298334	30289105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_30289633_30289780_30289946_30290057_30290127_30290220_30291391_30298204
m54284U_201205_001509/32178495/ccs	chr4	-	173	1	Intergenic	novelGene_2101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124615189	124615016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_124615000_124615200
m54284U_201205_001509/32179424/ccs	chr2	+	3989	14	NNC	ENSMUSG00000033411.17	novel	3386	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_8	156.6401295247	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGCTCTTTCTCAAAAT	NA	False	NA	11	True	AATAAA	-21	NA	121786940	121843096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_121787099_121799550_121799761_121807811_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121827912_121828338_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
m54284U_201205_001509/32245597/ccs	chr17	+	3753	1	NIC	ENSMUSG00000046070.10	novel	2625	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTGACCTAGAGTGTG	7775	False	NA	9	True	ATTAAA	-16	NA	25097231	25100984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25097200_25101000
m54284U_201205_001509/32245842/ccs	chr4	+	2435	14	NIC	ENSMUSG00000028641.17	novel	3188	15	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	112.839887613762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTGGTTTGTTCCAAGAG	NA	False	NA	8	True	AATAAA	-20	NA	119090111	119105569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_119090628_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
m54284U_201205_001509/32310191/ccs	chr12	+	3359	8	NNC	ENSMUSG00000037466.14	novel	2441	8	NA	NA	0	-600	intron_retention	FALSE	canonical	3	8	junction_1	72.1147045493837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCGGAACGCTTGAGTG	NA	False	NA	NA	False	TTTAAA	-26	NA	113120040	113129068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_113120206_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
m54284U_201205_001509/32571716/ccs	chr11	+	5289	1	Antisense	novelGene_ENSMUSG00000020719.15_AS_novelGene_ENSMUSG00002076984.1_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	464	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGAACGCCATTACCCGA	NA	False	NA	NA	False	NA	NA	NA	106673628	106678917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_106673600_106678900
m54284U_201205_001509/32572710/ccs	chr8	-	3609	1	NIC	ENSMUSG00000037070.11	novel	1695	2	NA	NA	0	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTGTCTTGATTTCT	NA	False	NA	NA	False	AGTAAA	-16	NA	79235508	79231899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_79231900_79235500
m54284U_201205_001509/32573403/ccs	chr2	-	188	1	Intergenic	novelGene_882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTCTTTGTCTTTCAAC	NA	False	NA	NA	False	NA	NA	NA	78579182	78578994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_78579000_78579200
m54284U_201205_001509/32573569/ccs	chr7	-	3068	21	NIC	ENSMUSG00000019254.17	novel	2983	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	198	junction_15	26.2200305110425	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTGTCTCCTGATTG	9941	False	NA	-3	True	AATAAA	-17	NA	4504679	4484518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
m54284U_201205_001509/32768085/ccs	chr10	-	3868	25	NIC	ENSMUSG00000020074.8	novel	3862	25	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	103.452879437398	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGTCTTTTATTGAAGT	NA	False	NA	1	True	AATAAA	-35	NA	62628065	62580240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627988
m54284U_201205_001509/32770444/ccs	chr8	-	3430	12	NIC	ENSMUSG00000036180.16	novel	3363	13	NA	NA	-130	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_5	408.381141857448	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCACCTGTGTGGAAATC	NA	False	NA	-24	True	AATAAA	-17	NA	70427051	70361305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70365572_70365875_70367168_70367449_70368933_70369102_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
m54284U_201205_001509/3278207/ccs	chr8	+	202	1	Intergenic	novelGene_4299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCGAATCGATCCATAC	7160	False	NA	NA	False	NA	NA	NA	61137697	61137899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_61137700_61137900
m54284U_201205_001509/32834173/ccs	chr9	-	186	1	Intergenic	novelGene_4829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTACCTCCATGGTAGACT	6549	False	NA	NA	False	NA	NA	NA	59480114	59479928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_59479900_59480100
m54284U_201205_001509/32899923/ccs	chr3	-	266	1	Intergenic	novelGene_1628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCGTTATATCATCTGTGT	NA	False	NA	NA	False	NA	NA	NA	108477083	108476817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108476800_108477100
m54284U_201205_001509/32901329/ccs	chr3	-	171	1	Intergenic	novelGene_1353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTAAAAAATAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	11875670	11875499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_11875500_11875700
m54284U_201205_001509/32901655/ccs	chr16	+	183	1	Intergenic	novelGene_8184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATAGGGCTTGA	NA	False	NA	NA	False	NA	NA	NA	30285160	30285343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_30285200_30285300
m54284U_201205_001509/32967311/ccs	chr2	-	159	1	Intergenic	novelGene_1215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTAAAAAGAAA	6816	False	NA	NA	False	NA	NA	NA	164650376	164650217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_164650200_164650400
m54284U_201205_001509/32967349/ccs	chr12	-	175	1	Intergenic	novelGene_6719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTGCT	NA	False	NA	NA	False	NA	NA	NA	73390868	73390693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_73390700_73390900
m54284U_201205_001509/33030846/ccs	chr4	-	171	1	Intergenic	novelGene_1880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAGAGCAAGCGGGCTT	NA	False	NA	NA	False	NA	NA	NA	58566473	58566302	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_58566300_58566500
m54284U_201205_001509/33032274/ccs	chr10	+	183	1	Intergenic	novelGene_5419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CACTAAATAAAAAACATAAA	NA	False	NA	NA	False	NA	NA	NA	75885690	75885873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75885700_75885900
m54284U_201205_001509/33096831/ccs	chr18	+	5189	1	Intergenic	novelGene_8806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCGTTTTCTCGTTGGTGA	NA	False	NA	NA	False	NA	NA	NA	9592764	9597953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_9592800_9598000
m54284U_201205_001509/33293125/ccs	chr8	-	3376	4	NNC	ENSMUSG00000051176.7	novel	1772	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	2021.71725685534	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGAGTTCAATTTCTGG	NA	False	NA	NA	False	AATAAA	-17	NA	43760017	43748103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43749574_43753664_43753743_43757512_43759201_43759877
m54284U_201205_001509/33293729/ccs	chr5	-	5212	6	NIC	ENSMUSG00000054280.15	novel	9959	11	NA	NA	0	612	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	50.1701106237568	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGAGTCCATTCTTTTT	7053	False	NA	-2	True	AATAAA	-31	NA	33011600	32946551	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_33011436
m54284U_201205_001509/33360220/ccs	chr11	+	4168	15	NIC	ENSMUSG00000020271.18	novel	4019	14	NA	NA	0	-72	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	173.556333852753	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTTCCTGGCGATTGT	NA	False	NA	39	True	AATAAA	-30	NA	32592783	32696717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_32592936_32602747_32602905_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
m54284U_201205_001509/33556430/ccs	chr16	-	180	1	Intergenic	novelGene_8249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	37043985	37043805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_37043800_37044000
m54284U_201205_001509/33620253/ccs	chr6	-	178	1	Intergenic	novelGene_3250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTATTAGGTATTTTC	1965	False	NA	NA	False	NA	NA	NA	47874065	47873887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47873900_47874100
m54284U_201205_001509/33687363/ccs	chr10	+	3562	10	NIC	ENSMUSG00000005683.9	novel	2926	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	1246	junction_8	134.335493043938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGCTTGCTCTTACGTA	NA	False	NA	18	True	AATAAA	-18	NA	128173602	128198348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128195169_128195302_128195405_128195812_128196023_128196836
m54284U_201205_001509/33687729/ccs	chr3	-	2926	1	Antisense	novelGene_ENSMUSG00000037661.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	30910442	30907516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_-_30907500_30910400
m54284U_201205_001509/33688205/ccs	chr11	+	3503	25	NNC	ENSMUSG00000020782.19	novel	3551	26	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_22	220.394119042077	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	6800	False	NA	40	True	AATAAA	-25	NA	115714874	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115715004_115725622_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745885_115745932_115746017_115746080_115746294
m54284U_201205_001509/34013727/ccs	chr16	-	2051	1	Intergenic	novelGene_8236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGGAGTTTTGGTAAAC	NA	False	NA	NA	False	NA	NA	NA	34916167	34914116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_34914100_34916200
m54284U_201205_001509/3408725/ccs	chr4	-	194	1	Intergenic	novelGene_2117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATGGAGTATTG	NA	False	NA	NA	False	NA	NA	NA	126498881	126498687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_126498700_126498900
m54284U_201205_001509/34145729/ccs	chr9	-	737	1	Intergenic	novelGene_4934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCGGCAGTGCCCTGGGA	NA	False	NA	NA	False	NA	NA	NA	72574613	72573876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72573900_72574600
m54284U_201205_001509/34211982/ccs	chr7	+	2885	18	NIC	ENSMUSG00000030978.11	novel	3997	19	NA	NA	0	254	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	232.209352505457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTTGTCATCTATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	102091089	102118143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_102091251_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
m54284U_201205_001509/34408761/ccs	chrX	-	218	1	Intergenic	novelGene_9539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATACTTTACTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	93207301	93207083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_93207100_93207300
m54284U_201205_001509/34474475/ccs	chr2	-	4162	1	Genic_Genomic	ENSMUSG00000027583.14	novel	NA	NA	NA	NA	34451	1986	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAGCAAAAA	7573	False	NA	NA	False	NA	NA	NA	181031730	181027568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_181027600_181031700
m54284U_201205_001509/34539613/ccs	chr5	-	183	1	Intergenic	novelGene_2745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTATCCAGCATCCTAAA	NA	False	NA	NA	False	NA	NA	NA	108215203	108215020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108215000_108215200
m54284U_201205_001509/34540304/ccs	chr18	-	175	1	Intergenic	novelGene_8864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	34159321	34159146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34159100_34159300
m54284U_201205_001509/34671010/ccs	chr19	-	5330	23	NIC	ENSMUSG00000025006.19	novel	2688	24	NA	NA	0	2712	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	20.7997139204739	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGTGTTCTCTTCCTT	9860	False	NA	-2	True	AATAAA	-22	NA	40502223	40280484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_40283561_40284975_40285089_40287906_40287966_40288686_40288747_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40338342_40338458_40340720_40340851_40340961_40341010_40351645_40351710_40353437_40353611_40361919_40362062_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40502114
m54284U_201205_001509/34736148/ccs	chr11	+	1208	9	NIC	ENSMUSG00000020407.14	novel	1252	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	927.674301344497	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGACTCTGCGGTAGA	NA	False	NA	26	True	AATAAA	-20	NA	9068547	9086170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081783_9083233_9083349_9084721_9084932_9085163_9085311_9085960
m54284U_201205_001509/34867445/ccs	chr4	-	179	1	Intergenic	novelGene_1941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAGATTTTAAAA	NA	False	NA	NA	False	NA	NA	NA	98826787	98826608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_98826600_98826800
m54284U_201205_001509/34931483/ccs	chr5	+	188	1	Intergenic	novelGene_2687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCAGTTCTTTTTAATG	2439	False	NA	NA	False	NA	NA	NA	97703245	97703433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_97703200_97703400
m54284U_201205_001509/34996587/ccs	chr7	-	166	1	Intergenic	novelGene_3856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	47810528	47810362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_47810400_47810500
m54284U_201205_001509/35063968/ccs	chr5	+	222	1	Intergenic	novelGene_2476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATATATTACAAGGGC	NA	False	NA	NA	False	ATTAAA	-5	NA	21150960	21151182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_21151000_21151200
m54284U_201205_001509/35129628/ccs	chr5	+	4313	1	NIC	ENSMUSG00000058013.12	novel	1792	10	NA	NA	23518	-104	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGATCTACAAGTCTTA	NA	False	NA	NA	False	TTTAAA	-22	NA	93319879	93324192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_93319900_93324200
m54284U_201205_001509/35129914/ccs	chrX	-	172	1	Intergenic	novelGene_9705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTTAAAAAAAGTATA	NA	False	NA	NA	False	NA	NA	NA	158415948	158415776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_158415800_158415900
m54284U_201205_001509/35194620/ccs	chr5	+	216	1	Intergenic	novelGene_3092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTCCCTGAACCGTTCT	NA	False	NA	NA	False	NA	NA	NA	150057468	150057684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_150057500_150057700
m54284U_201205_001509/35261071/ccs	chr9	+	3555	9	NIC	ENSMUSG00000006673.15	novel	3331	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	392	junction_1	94.9992598655379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACTGGAGAACGTGTC	1163	False	NA	64	True	NA	NA	NA	108394301	108437362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433759_108434156_108434248_108436444
m54284U_201205_001509/35392229/ccs	chr11	+	165	1	Intergenic	novelGene_6144	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTAAAAAAAGGTGG	NA	False	NA	NA	False	NA	NA	NA	85142207	85142372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_85142200_85142400
m54284U_201205_001509/3541504/ccs	chr14	+	890	5	NNC	ENSMUSG00000021963.18	novel	5125	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	1484.07974431969	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCCAGGTGTAAAAGTT	NA	False	NA	-4	True	TATAAA	-28	NA	58035674	58039784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_58035812_58035944_58036055_58038016_58038131_58038950_58039074_58039378
m54284U_201205_001509/35653196/ccs	chr18	-	3273	9	NIC	ENSMUSG00000062526.5	novel	2494	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_3	9.69455388349562	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGGATCTTTTCTAA	NA	False	NA	1	True	GATAAA	-23	NA	67378738	67358113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
m54284U_201205_001509/35718096/ccs	chr16	-	3440	8	NIC	ENSMUSG00000005846.13	novel	1945	9	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_7	968.398678231233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTGTACTGTTGGTATT	1021	False	NA	-3	True	ATTAAA	-25	NA	11021128	11010833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_11011602_11012323_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
m54284U_201205_001509/35719069/ccs	chr7	+	2147	12	NIC	ENSMUSG00000003437.15	novel	2003	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	164	junction_5	17.3228936563179	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTAAAGTCTCTGTTCC	580	False	NA	20	True	AATAAA	-21	NA	28092386	28098813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
m54284U_201205_001509/35782782/ccs	chr9	+	166	1	Intergenic	novelGene_5151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAGGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	120349208	120349374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_120349200_120349400
m54284U_201205_001509/35784000/ccs	chr15	-	176	1	Intergenic	novelGene_7685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAGAGAGACTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	37246961	37246785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_37246800_37247000
m54284U_201205_001509/35849805/ccs	chr13	+	3061	13	NIC	ENSMUSG00000042015.18	novel	3063	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_4	18.8981186600383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGGGTTTGTTTTTTT	NA	False	NA	16	True	AATATA	-17	NA	95112855	95159822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136373_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
m54284U_201205_001509/35981499/ccs	chr8	-	181	1	Intergenic	novelGene_4360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTCTCTAGAGTTTTA	NA	False	NA	NA	False	NA	NA	NA	81645304	81645123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_81645100_81645300
m54284U_201205_001509/36110547/ccs	chr16	+	174	1	Intergenic	novelGene_8055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGTTTTGCTTATCTTAA	2300	False	NA	NA	False	NA	NA	NA	10787934	10788108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_10787900_10788100
m54284U_201205_001509/36372903/ccs	chr3	-	3678	12	NIC	ENSMUSG00000027829.16	novel	2364	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	8	junction_6	69.714292972303	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTCAAATATCTTATTT	NA	False	NA	NA	False	AATAAA	-23	NA	65865670	65853571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65857648_65857900_65857966_65858854_65858976_65862624_65862698_65864273_65864384_65864921_65864997_65865228
m54284U_201205_001509/36372907/ccs	chr2	-	3886	1	NIC	ENSMUSG00000027342.15	novel	1518	6	NA	NA	142	-125	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCAGTGCCGCCTTTG	8367	False	NA	-4	True	AATAAA	-20	NA	132095092	132091206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_132091200_132095100
m54284U_201205_001509/36374516/ccs	chr5	+	647	7	NNC	ENSMUSG00000041453.13	novel	1067	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	5852.7472585293	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTTTTCCTTAG	NA	False	NA	2	True	AATAAA	-16	NA	146769955	146772796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_146769982_146770457_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
m54284U_201205_001509/36440697/ccs	chr19	+	206	1	Intergenic	novelGene_9272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCACAAACTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	42390431	42390637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_42390400_42390600
m54284U_201205_001509/36506086/ccs	chr11	-	3973	7	NIC	ENSMUSG00000015869.17	novel	1841	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	839	junction_6	38.620662287894	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCTGCTGAGCTCCCAG	NA	False	NA	-7	True	AATAAA	-27	NA	116381174	116361670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116370651_116376694_116376762_116378943_116378997_116380873
m54284U_201205_001509/36571389/ccs	chr19	+	185	1	Intergenic	novelGene_9305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAACTTTTCATGGTCGTT	NA	False	NA	NA	False	NA	NA	NA	45975220	45975405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45975200_45975400
m54284U_201205_001509/36571467/ccs	chr10	+	3475	9	NIC	ENSMUSG00000035027.19	novel	1556	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	635	junction_2	48.9730474342776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGCTGTGCTCCTGCC	1157	False	NA	13	True	NA	NA	NA	80941805	80959717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80956945_80957736_80958447_80959453
m54284U_201205_001509/36767298/ccs	chr19	-	182	1	Intergenic	novelGene_9278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATAAAAAGCTAGAAACAGA	NA	False	NA	NA	False	NA	NA	NA	44200108	44199926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_44199900_44200100
m54284U_201205_001509/36896786/ccs	chr2	-	157	1	Intergenic	novelGene_584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	6041973	6041816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_6041800_6042000
m54284U_201205_001509/36898244/ccs	chr6	+	187	1	Intergenic	novelGene_3191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGAGGGTACCCAAGGG	NA	False	NA	NA	False	NA	NA	NA	38212822	38213009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38212800_38213000
m54284U_201205_001509/37028239/ccs	chr14	-	2668	18	NIC	ENSMUSG00000037544.15	novel	2964	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_9	138.956989686374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACATTCTTTTCTTC	NA	False	NA	NA	False	NA	NA	NA	47655664	47625244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47625577_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643323_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
m54284U_201205_001509/37028597/ccs	chr9	+	203	1	Intergenic	novelGene_4723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTTTCTGCTCCTTTTGC	NA	False	NA	NA	False	NA	NA	NA	43079968	43080171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_43080000_43080200
m54284U_201205_001509/37028662/ccs	chr6	-	193	1	Intergenic	novelGene_3418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAACTAATGTACATTG	NA	False	NA	NA	False	NA	NA	NA	111042265	111042072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_111042100_111042300
m54284U_201205_001509/37160260/ccs	chr4	-	1036	5	NNC	ENSMUSG00000040842.18	novel	3244	4	NA	NA	0	1254	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	87.0470418796641	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTCTTTTTTTTTTTTT	NA	False	NA	-19	True	NA	NA	NA	140867077	140842623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_140843176_140843847_140843952_140845837_140846093_140847634_140847685_140867002
m54284U_201205_001509/37161483/ccs	chrX	-	170	1	Intergenic	novelGene_9365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAGTGTGCACTACT	NA	False	NA	NA	False	NA	NA	NA	7623770	7623600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_7623600_7623800
m54284U_201205_001509/3735658/ccs	chr6	-	1847	1	Genic_Genomic	ENSMUSG00000108030.2	novel	NA	NA	NA	NA	-5	-6744	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8504	False	NA	NA	False	NA	NA	NA	116184959	116183112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr6_-_116183100_116185000
m54284U_201205_001509/37421884/ccs	chr7	+	1231	8	NIC	ENSMUSG00000046865.8	novel	1197	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	2113	junction_2	247.053493339861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	8588	False	NA	0	True	ATTAAA	-14	NA	27869191	27878694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_27869244_27873928_27874112_27874209_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
m54284U_201205_001509/37423763/ccs	chr2	-	174	1	Intergenic	novelGene_791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAATCCTAACAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	52246959	52246785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_52246800_52247000
m54284U_201205_001509/37488258/ccs	chr2	-	5146	1	Intergenic	novelGene_802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGCACTATCCAAATCTT	NA	False	NA	NA	False	NA	NA	NA	58997711	58992565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_58992600_58997700
m54284U_201205_001509/37489045/ccs	chr6	-	174	1	Intergenic	novelGene_3233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATGGCAACAACA	NA	False	NA	-1	True	NA	NA	NA	39764387	39764213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39764200_39764400
m54284U_201205_001509/37618313/ccs	chr14	+	2001	9	NNC	ENSMUSG00000040618.8	novel	2784	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_8	688.63742274146	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCTGCATAG	9014	False	NA	31	True	NA	NA	NA	55777845	55786391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785766
m54284U_201205_001509/37880991/ccs	chr16	+	174	1	Intergenic	novelGene_8052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	10123153	10123327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_10123200_10123300
m54284U_201205_001509/38013684/ccs	chr14	-	1758	6	NIC	ENSMUSG00000035953.15	novel	1594	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	698	junction_5	55.1049906995728	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCCCACTTAACAACTT	NA	False	NA	-9	True	AATAAA	-18	NA	51168313	51164671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_51165495_51166277_51166369_51166462_51166765_51167040_51167148_51167590_51167782_51168069
m54284U_201205_001509/38275521/ccs	chrX	+	4009	26	NNC	ENSMUSG00000041718.17	novel	4168	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_2	328.096449234063	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGAGTTTTCTTTTTG	NA	False	NA	15	True	AATAAA	-25	NA	143100998	143157446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_+_143101118_143102998_143103058_143105013_143105147_143119107_143119460_143120087_143120172_143121959_143122011_143122720_143122768_143123715_143123789_143125391_143125474_143125642_143125806_143127256_143127333_143128607_143128717_143129677_143129743_143130955_143131057_143132287_143132416_143133278_143133526_143134258_143134373_143134767_143134910_143135625_143135747_143136436_143136470_143136568_143136625_143139791_143139958_143146860_143147104_143150894_143150936_143152556_143152858_143156543
m54284U_201205_001509/38341345/ccs	chr11	-	2718	4	NIC	ENSMUSG00000020482.5	novel	3372	5	NA	NA	0	-1038	intron_retention	FALSE	canonical	3	395	junction_1	41.0203201677738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGAAGCCAGCTACTT	NA	False	NA	-7	True	NA	NA	NA	5492187	5479924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5481534_5484242_5484990_5491372_5491424_5491876
m54284U_201205_001509/38405938/ccs	chrX	+	217	1	Intergenic	novelGene_9474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGCTAAGTCAAACTGA	2515	False	NA	NA	False	NA	NA	NA	56795259	56795476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_56795300_56795500
m54284U_201205_001509/38471262/ccs	chr11	-	181	1	Intergenic	novelGene_6182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATTGACTGATTTTTAAA	9209	False	NA	NA	False	NA	NA	NA	87791891	87791710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87791700_87791900
m54284U_201205_001509/38537160/ccs	chr1	-	197	1	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGGCACGACTTCAG	NA	False	NA	NA	False	NA	NA	NA	13261113	13260916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_13260900_13261100
m54284U_201205_001509/38668023/ccs	chr2	-	3890	1	Genic_Genomic	ENSMUSG00000026726.11	novel	NA	NA	NA	NA	179268	3868	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2099	False	NA	NA	False	NA	NA	NA	13281170	13277280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_13277300_13281200
m54284U_201205_001509/38798201/ccs	chr5	-	2644	4	NNC	ENSMUSG00000043323.18	novel	976	3	NA	NA	-4248	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_3	229.428759216354	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCTTATTATTTAAG	NA	False	NA	-1	True	AATAAA	-28	NA	110585435	110577740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_110580012_110580766_110580968_110584479_110584595_110585378
m54284U_201205_001509/38930596/ccs	chr3	-	199	1	Intergenic	novelGene_1396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGATTCACAGTTCAGACT	NA	False	NA	NA	False	NA	NA	NA	51305017	51304818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_51304800_51305000
m54284U_201205_001509/39125121/ccs	chr19	+	2237	1	Genic_Genomic	ENSMUSG00000024791.11	novel	NA	NA	NA	NA	4987	1273	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTTTACATGGAGGTT	NA	False	NA	NA	False	NA	NA	NA	6140843	6143080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_+_6140800_6143100
m54284U_201205_001509/39191291/ccs	chr15	+	213	1	Intergenic	novelGene_7833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCAGCTACTCCCTAAT	7494	False	NA	NA	False	NA	NA	NA	81197994	81198207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81198000_81198200
m54284U_201205_001509/39323652/ccs	chr17	-	2231	1	FSM	ENSMUSG00000093009.3	ENSMUST00000175268.3	66	1	-1454	-711	-1454	711	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGACTTTTTCTGT	6007	False	NA	NA	False	AATAAA	-16	NA	35171447	35169216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_35169200_35171400
m54284U_201205_001509/3932754/ccs	chr5	-	184	1	Intergenic	novelGene_3006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTTTTTAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	138090053	138089869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_138089900_138090100
m54284U_201205_001509/3933321/ccs	chr13	-	172	1	Intergenic	novelGene_6974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGCTTCAATTTT	NA	False	NA	-4	True	NA	NA	NA	14246735	14246563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_14246600_14246700
m54284U_201205_001509/3934080/ccs	chrX	-	185	1	Intergenic	novelGene_9680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTACATAATTTGTGCCC	NA	False	NA	NA	False	NA	NA	NA	151365802	151365617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_151365600_151365800
m54284U_201205_001509/39781165/ccs	chrX	-	190	1	Intergenic	novelGene_9619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATAAATCTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	117353982	117353792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_117353800_117354000
m54284U_201205_001509/39913262/ccs	chr13	-	3970	5	NIC	ENSMUSG00000021418.16	novel	4380	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	532	junction_3	22.8637267303474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTTGCTTGTTTGTTGTC	NA	False	NA	-6	True	CATAAA	-23	NA	36090342	36080686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36088547_36090186
m54284U_201205_001509/3997802/ccs	chr10	+	2180	8	NIC	ENSMUSG00000035754.9	novel	3911	10	NA	NA	0	86	intron_retention	FALSE	canonical	3	1673	junction_3	23.4755626304531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTTGGTTGTTCTGTCCC	2289	False	NA	36	True	ACTAAA	-24	NA	79795988	79803531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79796207_79796835_79796947_79800759_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
m54284U_201205_001509/3998145/ccs	chr12	-	265	1	Intergenic	novelGene_6771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	470	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTAAGGTTTTGTGAC	NA	False	NA	NA	False	NA	NA	NA	81669931	81669666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_81669700_81669900
m54284U_201205_001509/40109816/ccs	chr10	+	1772	9	NIC	ENSMUSG00000001786.15	novel	5388	9	NA	NA	-86	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_1	77.6434156899347	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGACTTGACTTTTTT	NA	False	NA	10	True	AGTAAA	-13	NA	85857749	85884187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_85858009_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
m54284U_201205_001509/40173689/ccs	chr8	-	2037	1	FSM	ENSMUSG00000077563.3	ENSMUST00000104375.3	131	1	-1526	-380	-1526	380	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTTTGCTTCTATG	NA	False	NA	-15	True	AATAAA	-15	NA	71350059	71348022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_71348000_71350100
m54284U_201205_001509/40175623/ccs	chr8	-	182	1	Intergenic	novelGene_4587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAACAATGAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	124193454	124193272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124193300_124193500
m54284U_201205_001509/40305023/ccs	chr2	-	175	1	Intergenic	novelGene_1138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATGTGGATTCTG	NA	False	NA	NA	False	NA	NA	NA	154230929	154230754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_154230800_154230900
m54284U_201205_001509/40307099/ccs	chr10	-	158	1	Intergenic	novelGene_5324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATAAATTAATT	9743	False	NA	NA	False	NA	NA	NA	60728453	60728295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_60728300_60728500
m54284U_201205_001509/40435802/ccs	chr13	+	2214	1	Genic_Genomic	ENSMUSG00000021712.16	novel	NA	NA	NA	NA	22499	438	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTTATTTATTTATT	NA	False	NA	NA	False	AATAAA	-17	NA	104338104	104340318	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_+_104338100_104340300
m54284U_201205_001509/40435812/ccs	chr11	-	172	1	Intergenic	novelGene_6287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	9898	False	NA	NA	False	NA	NA	NA	97771818	97771646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97771600_97771800
m54284U_201205_001509/40831713/ccs	chr5	+	2124	1	Intergenic	novelGene_2717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCAAATTGTCAGTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	104847369	104849493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_104847400_104849500
m54284U_201205_001509/41027655/ccs	chr1	+	653	2	Genic_Genomic	ENSMUSG00000079139.5	novel	1231	1	NA	NA	66	188	multi-exon	FALSE	canonical	3	66	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTCTTATTACCTGGG	4227	False	NA	NA	False	AATAAA	-25	NA	135159798	135161151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_+_135160090_135160789
m54284U_201205_001509/41158345/ccs	chr1	+	5371	1	NIC	ENSMUSG00000006304.15	novel	1439	11	NA	NA	0	5032	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAATCTTCAG	7881	False	NA	NA	False	NA	NA	NA	74275708	74281079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_74275700_74281100
m54284U_201205_001509/41222188/ccs	chr11	+	187	1	Intergenic	novelGene_6127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAAACTTTTAAAAAGTC	NA	False	NA	NA	False	NA	NA	NA	83369145	83369332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_83369100_83369300
m54284U_201205_001509/4129504/ccs	chr8	-	195	1	Intergenic	novelGene_4488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATCAACCTCTCAGGC	NA	False	NA	NA	False	NA	NA	NA	111581711	111581516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_111581500_111581700
m54284U_201205_001509/41683760/ccs	chr10	-	2720	22	NIC	ENSMUSG00000020277.11	novel	3730	22	NA	NA	-71	-951	combination_of_known_junctions	FALSE	canonical	0	0	junction_21	259.142962146248	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGGACAACATGACCAGA	NA	False	NA	-22	True	AATAAA	-23	NA	77845988	77823731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845838
m54284U_201205_001509/41812270/ccs	chrX	+	184	1	Intergenic	novelGene_9684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAATAATGATACATTTT	739	False	NA	NA	False	NA	NA	NA	152002630	152002814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_152002600_152002800
m54284U_201205_001509/41812883/ccs	chr5	-	4714	1	Antisense	novelGene_ENSMUSG00000034462.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGGTTGGAAAAAAATCAA	NA	False	NA	NA	False	AATAAA	-18	NA	104608163	104603449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_104603400_104608200
m54284U_201205_001509/41879121/ccs	chr11	+	3379	25	NIC	ENSMUSG00000020828.14	novel	875	7	NA	NA	116	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	6.19755776271768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGCCTCTTCTTGGAGA	NA	False	NA	2	True	AATAAA	-14	NA	70431005	70448936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_70431035_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
m54284U_201205_001509/41879924/ccs	chr16	-	1489	1	Intergenic	novelGene_8228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAGCCAGGCATGCAAT	NA	False	NA	NA	False	NA	NA	NA	33207722	33206233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_33206200_33207700
m54284U_201205_001509/41944634/ccs	chr4	+	224	1	Intergenic	novelGene_1809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	274	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGTAAGCGACCTCCA	NA	False	NA	NA	False	NA	NA	NA	40691910	40692134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_40691900_40692100
m54284U_201205_001509/42011120/ccs	chr1	-	3822	1	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTGGTTTGTTGCGTCT	NA	False	NA	NA	False	NA	NA	NA	23825272	23821450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_23821400_23825300
m54284U_201205_001509/42075186/ccs	chr3	+	4950	22	NIC	ENSMUSG00000039831.17	novel	5787	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.69331555346045	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCAGGTTCTTATGGC	NA	False	NA	25	True	GATAAA	-26	NA	121746878	121809803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_121747054_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
m54284U_201205_001509/42076710/ccs	chr3	-	155	1	Intergenic	novelGene_1574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATAATAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95783997	95783842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_95783800_95784000
m54284U_201205_001509/42207523/ccs	chr2	-	187	1	Intergenic	novelGene_1136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAAACTGCTAATCA	NA	False	NA	NA	False	NA	NA	NA	153433474	153433287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_153433300_153433500
m54284U_201205_001509/42533643/ccs	chr14	-	2342	8	NIC	ENSMUSG00000022199.13	novel	2348	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_4	3.10365156891435	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATAGCCTGGACTTCCC	NA	False	NA	-15	True	AATAAA	-23	NA	55150560	55144201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55144817_55144975_55145088_55145342_55145824_55145958_55146105_55147127_55147283_55149505_55149610_55149698_55150191_55150323
m54284U_201205_001509/42534530/ccs	chr8	+	189	1	Intergenic	novelGene_4353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTGAACCTCTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	79142941	79143130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_79142900_79143100
m54284U_201205_001509/42599678/ccs	chr12	-	5377	20	NIC	ENSMUSG00000042350.14	novel	5446	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	7	junction_19	21.533971100504	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTAAATGAGTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	85017674	84964923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017471
m54284U_201205_001509/42600829/ccs	chr4	+	197	1	Intergenic	novelGene_1766	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATCTGCCGGGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	21725852	21726049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_21725900_21726000
m54284U_201205_001509/4260258/ccs	chr1	-	170	1	Intergenic	novelGene_165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAAAGCAAGC	NA	False	NA	NA	False	NA	NA	NA	63966958	63966788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_63966800_63967000
m54284U_201205_001509/42729520/ccs	chr17	-	2053	6	NIC	ENSMUSG00000024325.9	novel	2034	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_2	9.32523458149981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTCTGTGTGTG	NA	False	NA	2	True	NA	NA	NA	34243626	34240057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34240458_34240656_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
m54284U_201205_001509/42731382/ccs	chr7	-	200	1	Intergenic	novelGene_4042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATTACAGTTCAGCAGA	NA	False	NA	NA	False	NA	NA	NA	115962483	115962283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_115962300_115962500
m54284U_201205_001509/42796583/ccs	chr6	+	179	1	Intergenic	novelGene_3321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTTTGAATATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	71581879	71582058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_71581900_71582100
m54284U_201205_001509/42994406/ccs	chr17	+	185	1	Intergenic	novelGene_8692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAACATGCTTCAGCAT	NA	False	NA	NA	False	NA	NA	NA	68209325	68209510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_68209300_68209500
m54284U_201205_001509/43189832/ccs	chr15	+	2252	19	NNC	ENSMUSG00000023007.16	novel	2619	25	NA	NA	0	3882	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_18	45.4269526238703	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTCAAGTGTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	99192967	99208840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_99193155_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99208539
m54284U_201205_001509/43189951/ccs	chr6	+	2934	1	ISM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	89127	0	12343	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTCCAAGAGTTCTCAG	8592	False	NA	33	True	AATAAA	-33	NA	136584926	136587860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_136584900_136587900
m54284U_201205_001509/4327076/ccs	chr9	-	202	1	Intergenic	novelGene_4651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACGACAGAGACATGT	3196	False	NA	NA	False	NA	NA	NA	20922653	20922451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_20922500_20922700
m54284U_201205_001509/4327545/ccs	chr7	-	183	1	Intergenic	novelGene_3973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTACTTACATACTATAT	NA	False	NA	NA	False	NA	NA	NA	100178617	100178434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_100178400_100178600
m54284U_201205_001509/43647292/ccs	chr13	+	169	1	Intergenic	novelGene_7008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATTATTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	30280381	30280550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_30280400_30280600
m54284U_201205_001509/43649264/ccs	chr16	-	195	1	Intergenic	novelGene_8078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTTGGATAGGGAGGACT	NA	False	NA	NA	False	NA	NA	NA	13594792	13594597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_13594600_13594800
m54284U_201205_001509/43713033/ccs	chr4	-	3601	11	NIC	ENSMUSG00000028454.17	novel	3525	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_3	52.6482668280733	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGCTAAGATCTGTGAGG	-7	True	NA	-7	True	AATAAA	-21	NA	43025819	43017634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_43018039_43018147_43018219_43019211_43019440_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562_43025075_43025779
m54284U_201205_001509/43845469/ccs	chr11	+	2809	10	NNC	ENSMUSG00000010554.15	novel	12584	10	NA	NA	0	792	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	125.470669436681	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACTATTGATCCTGTTT	8580	False	NA	96	True	AATATA	-14	NA	74661741	74709512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_74661961_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
m54284U_201205_001509/43910944/ccs	chr4	-	194	1	Intergenic	novelGene_2448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGTATTCCAAACTCCCG	NA	False	NA	NA	False	NA	NA	NA	156396845	156396651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_156396700_156396800
m54284U_201205_001509/4392239/ccs	chr2	-	203	1	Intergenic	novelGene_941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAACTAAGTTGAAAATGA	NA	False	NA	NA	False	NA	NA	NA	91661063	91660860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91660900_91661100
m54284U_201205_001509/43974727/ccs	chr14	-	601	3	Intergenic	novelGene_7536	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_2	43	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	73431987	73424813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_73425028_73425702_73425852_73431749
m54284U_201205_001509/43975758/ccs	chr6	-	150	1	Intergenic	novelGene_3274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTAAAAATTGGGAA	5062	False	NA	NA	False	NA	NA	NA	52255767	52255617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_52255600_52255800
m54284U_201205_001509/44107638/ccs	chr8	-	193	1	Intergenic	novelGene_4365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGCTCACTTTTAGAG	9583	False	NA	NA	False	NA	NA	NA	84785736	84785543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_84785500_84785700
m54284U_201205_001509/44173185/ccs	chr9	-	2736	20	NNC	ENSMUSG00000056167.9	novel	2853	20	NA	NA	0	-133	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_16	161.333037628599	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTTGTTGGTTTGTGTT	NA	False	NA	-10	True	TATAAA	-20	NA	114469252	114415166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439791_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456601_114458074_114458226_114460889_114461052_114461744_114461840_114468986
m54284U_201205_001509/44237556/ccs	chr10	+	635	6	NIC	ENSMUSG00000033105.13	novel	6992	22	NA	NA	0	1878	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	92.058676940308	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGTATGCATTATGAAA	NA	False	NA	NA	False	NA	NA	NA	76367445	76373435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76373402
m54284U_201205_001509/44238773/ccs	chr10	+	189	1	Intergenic	novelGene_5282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTGTGGATTTT	NA	False	NA	NA	False	NA	NA	NA	42699420	42699609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_42699400_42699600
m54284U_201205_001509/44501126/ccs	chr19	-	4202	19	NIC	ENSMUSG00000024969.16	novel	2867	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	106.764148164697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCTACTGTTCCTT	4078	False	NA	-1	True	AATAAA	-20	NA	7319007	7252760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_7254816_7255406_7255452_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532_7318620_7318863
m54284U_201205_001509/44565128/ccs	chr1	+	211	1	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTGGTAGGCACTG	5071	False	NA	NA	False	NA	NA	NA	7116724	7116935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_7116700_7116900
m54284U_201205_001509/44566688/ccs	chr9	+	200	1	Intergenic	novelGene_4810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTGTGGGTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	58151898	58152098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_58151900_58152100
m54284U_201205_001509/44631967/ccs	chr14	-	177	1	Intergenic	novelGene_7377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAATAAAATCTGGGCC	NA	False	NA	NA	False	NA	NA	NA	27568741	27568564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_27568600_27568700
m54284U_201205_001509/44762029/ccs	chr16	-	163	1	Intergenic	novelGene_8244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTTTAAGATAGTTT	NA	False	NA	NA	False	NA	NA	NA	35819087	35818924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_35818900_35819100
m54284U_201205_001509/44762578/ccs	chr9	-	5863	24	NIC	ENSMUSG00000032580.13	novel	3205	25	NA	NA	0	0	intron_retention	FALSE	canonical	3	316	junction_19	102.750105211542	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGTGTCTTTATTGA	9705	False	NA	-2	True	AAGAAA	-16	NA	107648195	107617694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
m54284U_201205_001509/44829347/ccs	chr6	+	752	1	Intergenic	novelGene_3161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGATTTG	NA	False	NA	NA	False	NA	NA	NA	33608045	33608797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_33608000_33608800
m54284U_201205_001509/45156872/ccs	chr5	-	215	1	Intergenic	novelGene_2536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGGTCTGCATAAGC	5885	False	NA	NA	False	NA	NA	NA	33269233	33269018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_33269000_33269200
m54284U_201205_001509/45222416/ccs	chr7	-	184	1	Intergenic	novelGene_4106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAATAAATTAAAACA	NA	False	NA	NA	False	NA	NA	NA	127437364	127437180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127437200_127437400
m54284U_201205_001509/4524282/ccs	chr11	-	2858	1	Intergenic	novelGene_5977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGAAGTCGGGCGGTG	4699	False	NA	NA	False	TATAAA	-31	NA	72535855	72532997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_72533000_72535900
m54284U_201205_001509/45418150/ccs	chr17	+	186	1	Intergenic	novelGene_8627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCATACAGAGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	47785693	47785879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47785700_47785900
m54284U_201205_001509/45549307/ccs	chr11	+	4077	11	NIC	ENSMUSG00000000142.16	novel	2551	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	15.2345003199974	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGCCTCATCTTTGGAT	NA	False	NA	7	True	ATTAAA	-19	NA	108812161	108841609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_108812192_108813977_108814929_108822264_108822406_108830137_108830241_108832728_108832870_108833016_108833523_108833760_108833956_108834481_108834713_108835335_108835432_108836705_108836874_108840094
m54284U_201205_001509/45744915/ccs	chr1	-	175	1	Intergenic	novelGene_364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGAGTGAGGCGGGGG	NA	False	NA	NA	False	NA	NA	NA	143608608	143608433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_143608400_143608600
m54284U_201205_001509/45745042/ccs	chr12	-	185	1	Intergenic	novelGene_6736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAAACCTAGGTCTGGG	NA	False	NA	NA	False	NA	NA	NA	76826454	76826269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_76826300_76826500
m54284U_201205_001509/45941832/ccs	chr2	-	2852	1	FSM	ENSMUSG00000075271.5	ENSMUST00000099994.5	3721	1	-7	876	-7	-876	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTTTACTGTTCAT	NA	False	NA	-17	True	AATAAA	-14	NA	75812318	75809466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_75809500_75812300
m54284U_201205_001509/46074328/ccs	chr12	-	180	1	Intergenic	novelGene_6542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAGGAAT	NA	False	NA	NA	False	NA	NA	NA	4165589	4165409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_4165400_4165600
m54284U_201205_001509/46466194/ccs	chr4	-	2995	1	NIC	ENSMUSG00000033379.14	novel	1000	8	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTCTGTTGGCCCC	NA	False	NA	-1	True	AATAAA	-21	NA	117744517	117741522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_117741500_117744500
m54284U_201205_001509/46532896/ccs	chr11	-	3531	7	NNC	ENSMUSG00000017615.13	novel	3768	7	NA	NA	94	-55	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	55.9871016891887	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTTCCAGTGAGCAG	NA	False	NA	-41	True	AATAAA	-19	NA	78427003	78413730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419922_78420066_78420853_78421174_78426911
m54284U_201205_001509/4655935/ccs	chr3	-	495	2	NIC	ENSMUSG00000040269.6	novel	783	3	NA	NA	106	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCGTGGTTCTTTT	NA	False	NA	-1	True	NA	NA	NA	8988872	8867205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_8867475_8988646
m54284U_201205_001509/46597207/ccs	chr13	-	2992	2	Intergenic	novelGene_7182	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAATAAAGTTTCTTC	1335	False	NA	NA	False	AATAAA	-24	NA	67010194	66974980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_66977867_67010088
m54284U_201205_001509/46925687/ccs	chr5	+	2768	8	NNC	ENSMUSG00000049327.18	novel	2739	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	293.228196990337	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTGTTGTTGTTGTTA	NA	False	NA	29	True	AATAAA	-38	NA	124578029	124600371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_124578145_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
m54284U_201205_001509/47055455/ccs	chr12	-	3923	18	NIC	ENSMUSG00000052593.17	novel	4443	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_17	36.7971151268805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATTGTCTTAATTGTAT	NA	False	NA	-7	True	TATAAA	-18	NA	21423540	21373811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21423336
m54284U_201205_001509/47057215/ccs	chr2	+	1882	1	Intergenic	novelGene_768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37480860	37482742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_37480900_37482700
m54284U_201205_001509/47121391/ccs	chr16	-	187	1	Intergenic	novelGene_8191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAACTAAGACAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	31391118	31390931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31390900_31391100
m54284U_201205_001509/47252595/ccs	chr10	+	182	1	Intergenic	novelGene_5243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATAGGCCTATA	NA	False	NA	NA	False	NA	NA	NA	30610220	30610402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_30610200_30610400
m54284U_201205_001509/47318446/ccs	chr11	-	3214	11	NIC	ENSMUSG00000020882.18	novel	1880	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	63	junction_9	14.7651616990807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTGGTGTCTGTGGTTT	NA	False	NA	NA	False	NA	NA	NA	97913460	97895750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
m54284U_201205_001509/47382601/ccs	chr5	-	172	1	Intergenic	novelGene_2893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAGATATATTTG	4432	False	NA	NA	False	NA	NA	NA	124031379	124031207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124031200_124031400
m54284U_201205_001509/47514914/ccs	chr7	-	192	1	Intergenic	novelGene_3684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTATTTACTTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	19100202	19100010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_19100000_19100200
m54284U_201205_001509/47580679/ccs	chr5	-	187	1	Intergenic	novelGene_2915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTTCAAGGCCAGCCTG	8773	False	NA	NA	False	NA	NA	NA	125291762	125291575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125291600_125291800
m54284U_201205_001509/47647109/ccs	chr16	-	488	4	NNC	ENSMUSG00000022890.14	novel	809	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	3183.80097786697	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631893	84624758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_84624884_84625312_84625438_84628216_84628391_84631829
m54284U_201205_001509/47713095/ccs	chr12	+	3283	1	Genic_Genomic	ENSMUSG00000019969.15	novel	NA	NA	NA	NA	10523	3245	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCGGTGCTTGTTTTCTTC	NA	False	NA	1	True	AATAAA	-14	NA	83781935	83785218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_+_83781900_83785200
m54284U_201205_001509/4784232/ccs	chr19	+	175	1	Intergenic	novelGene_9313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	46450540	46450715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46450500_46450700
m54284U_201205_001509/47842871/ccs	chr3	-	2903	1	NIC	ENSMUSG00000028096.14	novel	4598	14	NA	NA	0	-19925	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGCAGGTTCCAGTATA	1863	False	NA	NA	False	NA	NA	NA	96812662	96809759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_96809800_96812700
m54284U_201205_001509/47909313/ccs	chr3	+	200	1	Intergenic	novelGene_1639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCCAAAACCAAAAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	115495520	115495720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_115495500_115495700
m54284U_201205_001509/48037949/ccs	chr2	-	219	1	Intergenic	novelGene_672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGGAGATGCAAAAACC	NA	False	NA	NA	False	NA	NA	NA	29722601	29722382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29722400_29722600
m54284U_201205_001509/48039065/ccs	chr17	+	174	1	Intergenic	novelGene_8529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGGTCTTAAAG	NA	False	NA	NA	False	NA	NA	NA	33003618	33003792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_33003600_33003800
m54284U_201205_001509/48039853/ccs	chr5	-	4184	11	NIC	ENSMUSG00000118665.1	novel	4451	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	60.0224124806726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTGCATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	100648493	100589899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100632998_100633715_100648359
m54284U_201205_001509/48039989/ccs	chr9	+	3577	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	102	0	intron_retention	FALSE	canonical	2	15	junction_5	128.701689965594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1404	False	NA	17	True	AATAAA	-18	NA	113760103	113806069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760288_113760575_113760835_113773915_113774068_113780675_113780753_113785030_113785143_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201205_001509/48105428/ccs	chr9	+	190	1	Intergenic	novelGene_4887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAATAAAGAACC	NA	False	NA	NA	False	NA	NA	NA	65527867	65528057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_65527900_65528100
m54284U_201205_001509/48433118/ccs	chr9	-	189	1	Intergenic	novelGene_4817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATATACCATCACACCCA	NA	False	NA	NA	False	NA	NA	NA	58531615	58531426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58531400_58531600
m54284U_201205_001509/4849755/ccs	chr2	+	173	1	Intergenic	novelGene_649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAATTCCTACAGAAA	NA	False	NA	NA	False	NA	NA	NA	26756721	26756894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_26756700_26756900
m54284U_201205_001509/48499035/ccs	chr10	-	161	1	Intergenic	novelGene_5495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAAGGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	89707798	89707637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_89707600_89707800
m54284U_201205_001509/48562861/ccs	chr11	-	3246	7	NIC	ENSMUSG00000001034.18	novel	3134	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_5	86.9739743959204	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCGTCATTTTTGGGGT	NA	False	NA	1	True	AATACA	-19	NA	61385092	61379637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61384012_61384331_61384781_61384905
m54284U_201205_001509/48628598/ccs	chr18	+	390	1	Intergenic	novelGene_8878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTAGTTTATTTTGCAT	NA	False	NA	NA	False	NA	NA	NA	35067711	35068101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35067700_35068100
m54284U_201205_001509/48695989/ccs	chr3	-	3523	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	85	junction_1	271.629109474398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
m54284U_201205_001509/48696043/ccs	chr17	+	1702	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	81	junction_2	688.851914419928	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	False	NA	37	True	AATGAA	-26	NA	35460753	35472683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35460829_35462088_35462427_35463116_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
m54284U_201205_001509/48890341/ccs	chr15	-	157	1	Intergenic	novelGene_7659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGTCCAAAGGTCTTAG	NA	False	NA	NA	False	NA	NA	NA	25719148	25718991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_25719000_25719100
m54284U_201205_001509/49153421/ccs	chr2	-	2273	1	Antisense	novelGene_ENSMUSG00000003660.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAGAACTAGGGGCTGC	NA	False	NA	NA	False	NA	NA	NA	127064056	127061783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_127061800_127064100
m54284U_201205_001509/49154479/ccs	chr12	-	182	1	Intergenic	novelGene_6823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTTAAAAACAAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	87004530	87004348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_87004300_87004500
m54284U_201205_001509/4916979/ccs	chr7	+	1007	7	NIC	ENSMUSG00000042831.14	novel	982	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	165.266451526013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTTTGGATTTTTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	30008201	30013729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30011930_30012133_30013343
m54284U_201205_001509/49285726/ccs	chr11	+	2207	14	NIC	ENSMUSG00000020430.13	novel	2911	15	NA	NA	0	-791	intron_retention	FALSE	canonical	3	864	junction_12	99.9495730844475	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCAATTGGATTCTGTG	NA	False	NA	17	True	NA	NA	NA	3913974	3929213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3928033_3928826
m54284U_201205_001509/49350704/ccs	chr7	-	3198	1	FSM	ENSMUSG00000083774.2	ENSMUST00000121753.2	513	1	-2386	-299	-2386	299	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	GATAAA	-37	NA	80875008	80871810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_80871800_80875000
m54284U_201205_001509/49414453/ccs	chr4	-	197	1	Intergenic	novelGene_2355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGAGAGTAGCGACA	NA	False	NA	NA	False	NA	NA	NA	147319213	147319016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_147319000_147319200
m54284U_201205_001509/49415152/ccs	chr14	-	4121	6	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	287.74321886015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059699	47045605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47054842_47054940_47059557
m54284U_201205_001509/49416520/ccs	chr17	-	2622	20	NIC	ENSMUSG00000042625.17	novel	3277	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_8	65.4452045015047	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCTGCTGCCAGGCATT	NA	False	NA	2	True	AATAAA	-31	NA	56891585	56869938	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874019_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
m54284U_201205_001509/49545419/ccs	chr16	-	187	1	Intergenic	novelGene_8291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCATGAACATATCAC	NA	False	NA	NA	False	NA	NA	NA	62735289	62735102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_62735100_62735300
m54284U_201205_001509/49545883/ccs	chr4	+	1759	7	NNC	ENSMUSG00000028333.11	novel	1716	7	NA	NA	1024	-124	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_1	2755.3325671424	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGCTTTTCTTTCTTTT	774	False	NA	29	True	AATAAA	-25	NA	46451925	46472533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_46452544_46460089_46460240_46463806_46463930_46468558_46468788_46469885_46470008_46471397_46471468_46472086
m54284U_201205_001509/49545985/ccs	chr18	-	215	1	Intergenic	novelGene_8914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCCCAAATCAAATTGGC	NA	False	NA	NA	False	AATAAA	-14	NA	36828285	36828070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36828100_36828300
m54284U_201205_001509/49677530/ccs	chr11	-	134	1	Intergenic	novelGene_6498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	119156620	119156486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_119156500_119156600
m54284U_201205_001509/49742712/ccs	chr9	+	191	1	Intergenic	novelGene_4861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAACAACCAGGGCTGGTG	3554	False	NA	NA	False	NA	NA	NA	64182873	64183064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64182900_64183100
m54284U_201205_001509/49807999/ccs	chr1	-	160	1	Intergenic	novelGene_107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTTTTAAAATTTTGA	NA	False	NA	NA	False	NA	NA	NA	44462749	44462589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_44462600_44462700
m54284U_201205_001509/49809979/ccs	chr4	+	3391	3	NIC	ENSMUSG00000038729.25	novel	784	2	NA	NA	0	-3342	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTCTTCATGTTGCAG	10	True	NA	6	True	TATAAA	-18	NA	57782179	57893640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_57782323_57854561_57857038_57892868
m54284U_201205_001509/49875762/ccs	chr14	+	1252	1	Intergenic	novelGene_7524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATTACCTATCTGATA	NA	False	NA	NA	False	NA	NA	NA	67926295	67927547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_67926300_67927500
m54284U_201205_001509/50004236/ccs	chr16	-	1104	3	NNC	ENSMUSG00000022677.16	novel	1147	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	214.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTATGGTCATGGTCT	NA	False	NA	-4	True	NA	NA	NA	14135208	14117107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_14118074_14122317_14122405_14135157
m54284U_201205_001509/50006876/ccs	chr17	+	182	1	Intergenic	novelGene_8417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGTTAAAAAAAAAAGAAAA	6046	False	NA	NA	False	NA	NA	NA	24759033	24759215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_24759000_24759200
m54284U_201205_001509/50070419/ccs	chr7	-	4608	21	NIC	ENSMUSG00000010755.18	novel	3222	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	290	junction_19	349.618345485474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGTCTGCCCTCTCA	NA	False	NA	-2	True	AATAAA	-16	NA	143153827	143111442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
m54284U_201205_001509/50071857/ccs	chr5	-	176	1	Intergenic	novelGene_2924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTATTTTTTATTAAT	NA	False	NA	NA	False	NA	NA	NA	125569434	125569258	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125569300_125569400
m54284U_201205_001509/50071978/ccs	chr9	-	2059	11	NIC	ENSMUSG00000031969.17	novel	2859	11	NA	NA	0	408	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	90.14565990662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTTCTCCTAAGGCAGT	9248	False	NA	-1	True	ATTAAA	-27	NA	26910845	26886263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901878_26901989_26902535_26902706_26903455_26903585_26910689
m54284U_201205_001509/50135456/ccs	chr15	-	224	1	Intergenic	novelGene_8000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTTTTGAGACAAGGAT	4908	False	NA	NA	False	NA	NA	NA	102210876	102210652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102210700_102210900
m54284U_201205_001509/50137091/ccs	chr5	-	177	1	Intergenic	novelGene_2546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTTCAA	6175	False	NA	NA	False	NA	NA	NA	34489137	34488960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_34489000_34489100
m54284U_201205_001509/50267460/ccs	chr9	-	188	1	Intergenic	novelGene_4740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAACTTGATGTATGA	NA	False	NA	NA	False	NA	NA	NA	44682630	44682442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_44682400_44682600
m54284U_201205_001509/50268949/ccs	chr11	+	169	1	Intergenic	novelGene_6170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAATAAAATAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87275875	87276044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_87275900_87276000
m54284U_201205_001509/50332386/ccs	chr4	+	5014	16	NIC	ENSMUSG00000028718.17	novel	5368	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	19.0251295805194	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGACTTCTCTTC	NA	False	NA	NA	False	ATTAAA	-17	NA	114857378	114900393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_114857545_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
m54284U_201205_001509/50332924/ccs	chr8	-	3687	6	NIC	ENSMUSG00000031916.18	novel	4476	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	128	junction_5	53.4093624751316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTGGTAGCCACTT	NA	False	NA	NA	False	NA	NA	NA	107783321	107772920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_107773904_107774692_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
m54284U_201205_001509/50333484/ccs	chr7	-	157	1	Intergenic	novelGene_3604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAACGTAACCAT	7988	False	NA	NA	False	NA	NA	NA	3241772	3241615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3241600_3241800
m54284U_201205_001509/50464371/ccs	chr11	+	1585	1	FSM	ENSMUSG00000078151.4	ENSMUST00000144172.2	876	1	-115	-594	-115	594	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGGAGACAGGCTAGA	NA	False	NA	NA	False	AATAAA	-37	NA	54291802	54293387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_+_54291800_54293400
m54284U_201205_001509/50465601/ccs	chr12	-	197	1	Intergenic	novelGene_6663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGAAAAGCTTTCAGT	NA	False	NA	NA	False	NA	NA	NA	59105199	59105002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_59105000_59105200
m54284U_201205_001509/50531107/ccs	chr8	-	177	1	Intergenic	novelGene_4448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	106637528	106637351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_106637400_106637500
m54284U_201205_001509/50726418/ccs	chr5	+	2710	14	NIC	ENSMUSG00000029613.16	novel	4325	15	NA	NA	0	-1534	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	59.129784042788	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGGACAAGTCCCTT	NA	False	NA	20	True	AATAAA	-25	NA	143803585	143839535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_143803764_143808680_143808840_143810568_143810703_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
m54284U_201205_001509/50857412/ccs	chr17	-	3021	10	NIC	ENSMUSG00000079553.12	novel	2357	11	NA	NA	0	0	intron_retention	FALSE	canonical	1	168	junction_4	139.548301297657	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTTCTTGTTTGTTT	9693	False	NA	-16	True	AATAAA	-17	NA	34109635	34094641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34105650_34105737_34105876_34109451
m54284U_201205_001509/50922339/ccs	chr11	+	211	1	Intergenic	novelGene_6063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGCCAATTAAATCTG	NA	False	NA	NA	False	NA	NA	NA	78130277	78130488	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_78130300_78130500
m54284U_201205_001509/50924064/ccs	chr17	+	3168	16	NIC	ENSMUSG00000002372.10	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	89	junction_2	115.170520919586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGACTCTTTTGCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	56980375	57018764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
m54284U_201205_001509/50987598/ccs	chr8	-	7087	13	NIC	ENSMUSG00000045636.17	novel	6548	14	NA	NA	0	-367	intron_retention	FALSE	canonical	3	90	junction_12	16.4738850575354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGAATGGCAGCCTCTGAC	NA	False	NA	-4	True	AATAAA	-21	NA	41586763	41444455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41453904_41455341_41455557_41468424_41468492_41475416_41475632_41501084_41501124_41503021_41503154_41529268_41529465_41535650_41537878_41586517
m54284U_201205_001509/50988938/ccs	chr13	-	3685	1	ISM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	14540	4592	14027	-4592	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATGTGGCAGTGTGTGG	NA	False	NA	-8	True	ATTAAA	-18	NA	38163653	38159968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_38160000_38163700
m54284U_201205_001509/51119986/ccs	chr5	+	4227	11	NIC	ENSMUSG00000014932.16	novel	2657	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	599	junction_1	83.6119608668521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTATTCTTTTCTGTT	NA	False	NA	8	True	AATAAA	-18	NA	32768514	32844401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_32768720_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
m54284U_201205_001509/5112872/ccs	chr10	-	4764	1	Antisense	novelGene_ENSMUSG00000019808.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAAATACACATGTAAC	7861	False	NA	NA	False	NA	NA	NA	13438289	13433525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_-_13433500_13438300
m54284U_201205_001509/51184654/ccs	chr2	-	171	1	Intergenic	novelGene_896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAAAAATGGAGCTACT	8020	False	NA	NA	False	NA	NA	NA	84382782	84382611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_84382600_84382800
m54284U_201205_001509/51316271/ccs	chr19	+	2280	11	NIC	ENSMUSG00000024891.7	novel	2619	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	24.5063257139866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCCTGGAGTGTTCACT	4312	False	NA	18	True	ATTAAA	-19	NA	5074141	5081997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_5074306_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
m54284U_201205_001509/51445998/ccs	chr9	-	5044	7	NIC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	0	187	intron_retention	FALSE	canonical	3	669	junction_4	274.76014792704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGGTTGTTTAAACAA	NA	False	NA	NA	False	AATACA	-18	NA	96993210	96960782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96975231_96979155_96979234_96982127_96982293_96992963
m54284U_201205_001509/51578236/ccs	chr3	-	182	1	Intergenic	novelGene_1642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAGAAGTTAAAATAT	NA	False	NA	NA	False	NA	NA	NA	116396508	116396326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_116396300_116396500
m54284U_201205_001509/51709108/ccs	chr11	-	4024	27	NNC	ENSMUSG00000008855.18	novel	3788	27	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	16	junction_26	54.5129185058337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGTGTGCCGTGTGGGTC	NA	False	NA	-3	True	ATTAAA	-22	NA	102120992	102086572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120595
m54284U_201205_001509/51840220/ccs	chrX	-	2646	1	Intergenic	novelGene_9557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCCGTTTTATCTTAAA	NA	False	NA	NA	False	AATAAA	-15	NA	100245296	100242650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_100242600_100245300
m54284U_201205_001509/51841008/ccs	chr2	-	172	1	Intergenic	novelGene_823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	69038579	69038407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_69038400_69038600
m54284U_201205_001509/51905603/ccs	chr16	-	171	1	Intergenic	novelGene_8150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTATG	NA	False	NA	NA	False	NA	NA	NA	21008574	21008403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_21008400_21008600
m54284U_201205_001509/52233803/ccs	chr7	-	167	1	Intergenic	novelGene_3605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTGATACAGGAT	7154	False	NA	NA	False	NA	NA	NA	3242606	3242439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3242400_3242600
m54284U_201205_001509/52235072/ccs	chr14	-	1845	3	NIC	ENSMUSG00000057156.11	novel	597	2	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCACTTCTGTGTTTC	5583	False	NA	-4	True	AATAAA	-35	NA	55101560	55093007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_55093169_55094217_55095739_55101397
m54284U_201205_001509/5243008/ccs	chr19	-	176	1	Intergenic	novelGene_9253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACAAGGC	NA	False	NA	NA	False	NA	NA	NA	41411758	41411582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_41411600_41411800
m54284U_201205_001509/52431689/ccs	chr6	-	1490	1	FSM	ENSMUSG00000029817.12	ENSMUST00000204013.2	3788	1	-3	2301	0	-2301	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTACTCTGTCAGTCA	4590	False	NA	NA	False	NA	NA	NA	49240967	49239477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_49239500_49241000
m54284U_201205_001509/5244122/ccs	chr10	-	191	1	Intergenic	novelGene_5234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGTGTCTGGATGTG	NA	False	NA	NA	False	NA	NA	NA	25177423	25177232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_25177200_25177400
m54284U_201205_001509/52692279/ccs	chr13	-	176	1	Intergenic	novelGene_7266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	97355033	97354857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_97354900_97355000
m54284U_201205_001509/52693138/ccs	chr11	-	188	1	Intergenic	novelGene_6200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATTATATAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	88968017	88967829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88967800_88968000
m54284U_201205_001509/52823233/ccs	chr4	-	1728	1	Intergenic	novelGene_2361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAGCACCAGCTAATAG	NA	False	NA	NA	False	NA	NA	NA	147567360	147565632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_147565600_147567400
m54284U_201205_001509/52824015/ccs	chr10	-	211	1	Intergenic	novelGene_5599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAAGGTGCATGGAATA	NA	False	NA	NA	False	CATAAA	-16	NA	126790142	126789931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_126789900_126790100
m54284U_201205_001509/52824514/ccs	chr19	-	1655	1	Genic_Genomic	ENSMUSG00000118263.2	novel	NA	NA	NA	NA	-116	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTTCTTTACTCTTTA	9084	False	NA	-3	True	NA	NA	NA	5357560	5355905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_5355900_5357600
m54284U_201205_001509/52888824/ccs	chr1	+	4083	22	NNC	ENSMUSG00000026288.15	novel	4125	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	35	junction_6	108.523485655297	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTGACTGTGTGGTAT	9370	False	NA	19	True	AATAAA	-20	NA	87603960	87648229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_87604093_87609210_87609292_87609408_87609481_87611464_87611589_87619346_87619454_87623054_87623158_87625117_87625268_87625834_87625953_87626749_87626847_87627361_87627501_87628881_87628991_87629136_87629226_87630839_87630922_87633655_87633746_87635817_87635932_87637339_87637423_87638786_87638875_87639752_87639903_87640914_87641012_87642759_87643036_87645411_87646007_87647042
m54284U_201205_001509/52954663/ccs	chr11	-	167	1	Intergenic	novelGene_6469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTTTATATAGCA	9015	False	NA	NA	False	NA	NA	NA	116166238	116166071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116166100_116166200
m54284U_201205_001509/5308980/ccs	chr10	-	176	1	Intergenic	novelGene_5569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTAGCCA	NA	False	NA	NA	False	NA	NA	NA	120102314	120102138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_120102100_120102300
m54284U_201205_001509/53151621/ccs	chr12	+	188	1	Intergenic	novelGene_6910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAACTACAACCTCACAA	NA	False	NA	NA	False	NA	NA	NA	111244604	111244792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111244600_111244800
m54284U_201205_001509/53609963/ccs	chr12	+	177	1	Intergenic	novelGene_6617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGCCATAATGCTT	NA	False	NA	NA	False	NA	NA	NA	31839316	31839493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_31839300_31839500
m54284U_201205_001509/53741076/ccs	chr18	-	1223	1	Intergenic	novelGene_8857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCATTTACTATTTTTAT	NA	False	NA	NA	False	NA	NA	NA	32007817	32006594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_32006600_32007800
m54284U_201205_001509/53741268/ccs	chr12	-	174	1	Intergenic	novelGene_6905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGGGAAACTTAT	NA	False	NA	NA	False	NA	NA	NA	111037358	111037184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111037200_111037400
m54284U_201205_001509/54002604/ccs	chr10	+	187	1	Intergenic	novelGene_5376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAGATCAATGTGTTGA	NA	False	NA	NA	False	NA	NA	NA	67303124	67303311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_67303100_67303300
m54284U_201205_001509/54068573/ccs	chr6	+	174	1	Intergenic	novelGene_3576	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGGTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	146563609	146563783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_146563600_146563800
m54284U_201205_001509/54329458/ccs	chr1	-	253	1	Intergenic	novelGene_258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTCTGAAGTAGACCAAT	1576	False	NA	NA	False	NA	NA	NA	93823900	93823647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_93823600_93823900
m54284U_201205_001509/54396801/ccs	chr17	-	210	1	Intergenic	novelGene_8554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTCCCTCATGTTGTGC	NA	False	NA	NA	False	NA	NA	NA	35411328	35411118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35411100_35411300
m54284U_201205_001509/5441067/ccs	chr3	-	216	1	Intergenic	novelGene_1530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCTGGCTTCATCACTC	5304	False	NA	NA	False	NA	NA	NA	89886168	89885952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89886000_89886200
m54284U_201205_001509/54461706/ccs	chr3	+	3547	21	NIC	ENSMUSG00000034349.15	novel	4057	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	218.191979687614	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAGTTTCCTGTTTTAT	NA	False	NA	20	True	TATAAA	-21	NA	68912302	68941956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_68912424_68913408_68913558_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
m54284U_201205_001509/54594002/ccs	chr17	-	1688	8	NIC	ENSMUSG00000024097.12	novel	1991	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	130	junction_5	756.932234855449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGATTTTTGTGTTCA	NA	False	NA	-7	True	AATAAA	-16	NA	80514733	80508738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512050_80512868_80513276_80513458_80514603
m54284U_201205_001509/54658363/ccs	chr3	+	199	1	Intergenic	novelGene_1580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATCCCATCATCCAAGC	NA	False	NA	NA	False	NA	NA	NA	96123315	96123514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_96123300_96123500
m54284U_201205_001509/54724340/ccs	chr11	+	1701	4	NNC	ENSMUSG00000004043.15	novel	3888	20	NA	NA	1695	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	13.2748718344933	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTGCTTCCTGGTTTA	NA	False	NA	14	True	AATAAA	-31	NA	100771539	100775995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_100771644_100771855_100772012_100772887_100772993_100774659
m54284U_201205_001509/54854062/ccs	chr3	+	6290	28	NIC	ENSMUSG00000037400.18	novel	4868	30	NA	NA	0	0	intron_retention	FALSE	canonical	2	5	junction_8	95.1676882607164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTTGCATGTTATC	NA	False	NA	11	True	AATAAA	-17	NA	35808254	35910425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35893364_35903582_35903714_35909253
m54284U_201205_001509/54855362/ccs	chr8	+	189	1	Intergenic	novelGene_4233	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTATCCTAATCTTCCTT	7060	False	NA	NA	False	NA	NA	NA	25701185	25701374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_25701200_25701400
m54284U_201205_001509/5505037/ccs	chr5	-	205	1	Intergenic	novelGene_2784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	698	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGAAGCCTGACTGGA	NA	False	NA	NA	False	NA	NA	NA	114218368	114218163	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_114218200_114218400
m54284U_201205_001509/5505674/ccs	chr4	+	167	1	Intergenic	novelGene_1750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCTGTTT	NA	False	NA	NA	False	NA	NA	NA	11373274	11373441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_11373300_11373400
m54284U_201205_001509/55116534/ccs	chr2	-	4064	1	NIC	ENSMUSG00000026958.14	novel	1682	13	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	9007	False	NA	-17	True	AATAAA	-17	NA	25246365	25242301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_25242300_25246400
m54284U_201205_001509/55182530/ccs	chr19	+	188	1	Intergenic	novelGene_9339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCACCATGGTCTACTCA	NA	False	NA	NA	False	NA	NA	NA	53571973	53572161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_53572000_53572200
m54284U_201205_001509/55379635/ccs	chr6	-	2858	5	NIC	ENSMUSG00000014748.14	novel	2984	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	255.470521782847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGTAGTGTGTGACC	9735	False	NA	-4	True	NA	NA	NA	83752772	83745866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_83748286_83749223_83749292_83750691_83750846_83751999_83752080_83752635
m54284U_201205_001509/55443652/ccs	chr6	-	165	1	Intergenic	novelGene_3243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTTTAAAAAAATTCTAA	NA	False	NA	NA	False	NA	NA	NA	47317296	47317131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47317100_47317300
m54284U_201205_001509/55511828/ccs	chr7	-	3445	1	Antisense	novelGene_ENSMUSG00000057093.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTCACAGGAGCACCT	NA	False	NA	NA	False	NA	NA	NA	27403348	27399903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_27399900_27403300
m54284U_201205_001509/55640752/ccs	chr12	+	194	1	Intergenic	novelGene_6756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTTTTTTAATTAAT	NA	False	NA	NA	False	AAGAAA	-3	NA	80517643	80517837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_80517600_80517800
m54284U_201205_001509/55642063/ccs	chr2	+	4852	14	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	0	intron_retention	FALSE	canonical	3	29	junction_9	77.6839294797082	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942946	128968514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955648_128957558_128957693_128959847_128961117_128964989_128965187_128965630_128965885_128967133
m54284U_201205_001509/5572513/ccs	chr10	-	126	1	Genic_Genomic	ENSMUSG00000112099.2	novel	NA	NA	NA	NA	1250	73	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAATGGATCAACAAAT	NA	False	NA	NA	False	AATAAA	-45	NA	115434983	115434857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_-_115434900_115435000
m54284U_201205_001509/56035353/ccs	chr2	+	184	1	Intergenic	novelGene_1012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGAAGCTTATTTTGGGC	NA	False	NA	NA	False	NA	NA	NA	119836728	119836912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119836700_119836900
m54284U_201205_001509/56166294/ccs	chr7	-	1595	12	NIC	ENSMUSG00000041560.13	novel	3176	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1334	junction_1	204.584198350889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGCTGGGGTCTTGTTAT	NA	False	NA	-9	True	AATAAA	-12	NA	15679999	15671762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
m54284U_201205_001509/56232392/ccs	chr1	-	185	1	Intergenic	novelGene_389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAATAAATAAAAA	9688	False	NA	NA	False	NA	NA	NA	153396843	153396658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153396700_153396800
m54284U_201205_001509/5637587/ccs	chr13	-	216	1	Intergenic	novelGene_7016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAATGTTTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35127822	35127606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_35127600_35127800
m54284U_201205_001509/56428221/ccs	chr10	-	5171	1	Intergenic	novelGene_5400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAGACCCGTTTCTTGTGG	NA	False	NA	NA	False	NA	NA	NA	74555785	74550614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_74550600_74555800
m54284U_201205_001509/56625075/ccs	chr5	-	223	1	Antisense	novelGene_ENSMUSG00000035851.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCCAGGCCAGGAATTT	NA	False	NA	NA	False	AATACA	-7	NA	86956092	86955869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_86955900_86956100
m54284U_201205_001509/56689440/ccs	chr10	-	4015	13	NNC	ENSMUSG00000035529.11	novel	3962	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	85.7627541535368	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATTTGTCATGATCT	NA	False	NA	NA	False	ATTAAA	-18	NA	85752850	85727829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85744170_85744224_85746086_85746273_85748701_85748836_85752387_85752594_85752671
m54284U_201205_001509/56754377/ccs	chr4	+	2028	1	Intergenic	novelGene_2306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGGCTGGCGAGATGGC	7524	False	NA	NA	False	NA	NA	NA	141230245	141232273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141230200_141232300
m54284U_201205_001509/56754786/ccs	chr19	-	5429	1	Intergenic	novelGene_9180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGACCGTTTTCTCGTTGG	NA	False	NA	NA	False	NA	NA	NA	22705267	22699838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_22699800_22705300
m54284U_201205_001509/56756106/ccs	chr1	-	4446	18	NNC	ENSMUSG00000102976.7	novel	4396	18	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_9	123.054324515666	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	False	NA	-8	True	AATAAA	-12	NA	133589118	133547608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565195_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
m54284U_201205_001509/56756219/ccs	chr5	+	177	1	Intergenic	novelGene_2946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAGCTGCTGCTGGA	1703	False	NA	NA	False	NA	NA	NA	129920261	129920438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_129920300_129920400
m54284U_201205_001509/56821036/ccs	chr12	+	6785	1	Intergenic	novelGene_6729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	76269310	76276095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_76269300_76276100
m54284U_201205_001509/56885267/ccs	chr7	+	2824	1	FSM	ENSMUSG00000065006.3	ENSMUST00000083072.3	107	1	-2523	-194	-2523	194	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTGTATGTATATGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	12662177	12665001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_12662200_12665000
m54284U_201205_001509/56951835/ccs	chr7	+	206	1	Intergenic	novelGene_4113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATAATGTTTTAGCCGG	7386	False	NA	NA	False	NA	NA	NA	128091292	128091498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_128091300_128091500
m54284U_201205_001509/56953015/ccs	chr9	-	149	1	Intergenic	novelGene_5140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTATATTAGACATAATAA	NA	False	NA	NA	False	NA	NA	NA	118874743	118874594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_118874600_118874700
m54284U_201205_001509/57017997/ccs	chr11	-	199	1	Intergenic	novelGene_6421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTGTTTAAGTAGTTG	NA	False	NA	NA	False	NA	NA	NA	107393955	107393756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107393800_107394000
m54284U_201205_001509/57149701/ccs	chr11	-	201	1	Intergenic	novelGene_6362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAACAGCCGTGCATTC	NA	False	NA	NA	False	NA	NA	NA	103725318	103725117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_103725100_103725300
m54284U_201205_001509/57278641/ccs	chr1	-	234	1	FSM	ENSMUSG00000065533.3	ENSMUST00000083599.3	68	1	65	-231	65	231	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCTCTCTGCCCTA	8217	False	NA	NA	False	ATTAAA	-23	NA	193189773	193189539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_193189500_193189800
m54284U_201205_001509/57476418/ccs	chr3	-	2563	5	NNC	ENSMUSG00000027860.16	novel	6531	8	NA	NA	-569	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	109.429200856079	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	102074858	102064032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102074578
m54284U_201205_001509/57477951/ccs	chrX	-	177	1	Intergenic	novelGene_9443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAGAATAAATACT	NA	False	NA	NA	False	NA	NA	NA	47068452	47068275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_47068300_47068500
m54284U_201205_001509/57542904/ccs	chr11	-	199	1	Intergenic	novelGene_5979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAACATTCTGGTTTT	2350	False	NA	NA	False	NA	NA	NA	72547909	72547710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_72547700_72547900
m54284U_201205_001509/5768117/ccs	chr8	+	4783	5	Fusion	ENSMUSG00000071796.14_ENSMUSG00000071793.13	novel	936	6	NA	NA	106	-60	multi-exon	FALSE	canonical	3	494	junction_2	356.227718601459	94	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGAAATTTGCTGGGAT	NA	False	NA	NA	False	AATAAA	-19	NA	20016571	20172934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr8_+_20016689_20157802_20158176_20163109_20163409_20167037_20167158_20169060
m54284U_201205_001509/5769271/ccs	chr14	-	169	1	Intergenic	novelGene_7390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTTTGACTA	NA	False	NA	NA	False	NA	NA	NA	34061239	34061070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_34061100_34061200
m54284U_201205_001509/57737304/ccs	chr3	-	175	2	Antisense	novelGene_ENSMUSG00000098890.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	31196456	31005527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_-_31005651_31196404
m54284U_201205_001509/57805471/ccs	chr4	-	2344	9	NIC	ENSMUSG00000006219.13	novel	3036	9	NA	NA	0	-657	combination_of_known_splicesites	FALSE	canonical	3	33	junction_8	517.29825475735	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGTAGCGGCGACCCAGC	NA	False	NA	-6	True	AATAAA	-19	NA	141327235	141304029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323225_141327158
m54284U_201205_001509/57934808/ccs	chr1	-	3525	22	NIC	ENSMUSG00000026516.9	novel	9392	23	NA	NA	0	307	combination_of_known_splicesites	TRUE	canonical	0	0	junction_20	142.602646326178	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGCTTCTCAGCCTGTT	NA	False	NA	-1	True	AATATA	-39	NA	180971769	180920516	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180969890_180969965_180971615
m54284U_201205_001509/57936525/ccs	chr19	-	5206	20	NIC	ENSMUSG00000025199.17	novel	3502	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	276	junction_7	18.9857797784293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAATCTCTACTCATTT	NA	False	NA	-1	True	ATTAAA	-15	NA	44095908	44061773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_44062980_44063869_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
m54284U_201205_001509/58000779/ccs	chr2	-	1573	1	Intergenic	novelGene_701	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGCGCCACAAAAGGCT	NA	False	NA	NA	False	NA	NA	NA	31380642	31379069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31379100_31380600
m54284U_201205_001509/58130619/ccs	chr9	+	189	1	Intergenic	novelGene_5129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTCTCAAGTAGCCCAG	NA	False	NA	NA	False	NA	NA	NA	114464866	114465055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_114464900_114465100
m54284U_201205_001509/58394605/ccs	chr19	-	176	1	Intergenic	novelGene_9317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTCCTCCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	46737657	46737481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_46737500_46737700
m54284U_201205_001509/58589400/ccs	chr8	+	178	1	Intergenic	novelGene_4271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGAGTTCTTTATATATTA	NA	False	NA	NA	False	NA	NA	NA	35863551	35863729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_35863600_35863700
m54284U_201205_001509/58590935/ccs	chr2	+	5130	11	NIC	ENSMUSG00000042548.15	novel	6968	13	NA	NA	0	-1910	intron_retention	FALSE	canonical	0	0	junction_2	53.7576971232957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATTTAGTGTGTGTATT	NA	False	NA	19	True	AATAAA	-21	NA	153187764	153244017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
m54284U_201205_001509/58788022/ccs	chr19	+	2830	20	NIC	ENSMUSG00000025001.12	novel	5868	22	NA	NA	0	-2771	combination_of_known_splicesites	FALSE	canonical	2	6	junction_6	418.483424679284	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCACATTATTTTTTC	NA	False	NA	17	True	AATAAA	-18	NA	38919358	38956724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
m54284U_201205_001509/58852571/ccs	chr3	-	3035	24	NNC	ENSMUSG00000028041.18	novel	2975	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	40.1852515525789	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGCTCCTGGAAGCT	NA	False	NA	-15	True	AATAAA	-16	NA	89257303	89246950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_89247261_89247361_89247487_89247707_89247780_89248019_89248084_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
m54284U_201205_001509/58853391/ccs	chr2	+	194	1	Intergenic	novelGene_1297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCACACCTATCAACAG	NA	False	NA	NA	False	NA	NA	NA	174841960	174842154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_174842000_174842200
m54284U_201205_001509/58982785/ccs	chr3	+	182	1	Intergenic	novelGene_1656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCCTGCTCCTTAGGTT	NA	False	NA	NA	False	NA	NA	NA	121410657	121410839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_121410700_121410800
m54284U_201205_001509/5901106/ccs	chr17	-	180	1	Intergenic	novelGene_8356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGTAAAGGGTGCTGA	9284	False	NA	NA	False	NA	NA	NA	6951877	6951697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_6951700_6951900
m54284U_201205_001509/59050666/ccs	chr1	-	179	1	Intergenic	novelGene_212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	82927458	82927279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_82927300_82927500
m54284U_201205_001509/590672/ccs	chr13	+	993	10	NNC	ENSMUSG00000021714.16	novel	1353	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	139.724685200293	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGTTTGTCTTTGTT	NA	False	NA	10	True	AATAAA	-21	NA	104365462	104386125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_+_104365511_104367239_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
m54284U_201205_001509/59115075/ccs	chr18	-	170	1	Intergenic	novelGene_8998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCTAATACTGTAAGCAA	NA	False	NA	NA	False	NA	NA	NA	67374300	67374130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_67374100_67374300
m54284U_201205_001509/59116011/ccs	chr2	-	185	1	Intergenic	novelGene_755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCATGCCAACATCCCCT	9600	False	NA	NA	False	NA	NA	NA	34682961	34682776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34682800_34683000
m54284U_201205_001509/591269/ccs	chr10	-	2185	1	Genic_Genomic	ENSMUSG00000001666.9_ENSMUSG00000092360.2	novel	NA	NA	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTCTTTGCTTCTGT	NA	False	NA	-4	True	AATAAA	-21	NA	75609248	75607063	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_-_75607100_75609200
m54284U_201205_001509/591976/ccs	chr10	-	289	1	Intergenic	novelGene_5641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCTTTCTTGCCAGGCA	9701	False	NA	NA	False	NA	NA	NA	128738031	128737742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128737700_128738000
m54284U_201205_001509/59244690/ccs	chr11	-	174	1	Intergenic	novelGene_6010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTTTATTTATTTA	NA	False	NA	NA	False	NA	NA	NA	75369746	75369572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75369600_75369700
m54284U_201205_001509/592602/ccs	chr11	+	295	1	Intergenic	novelGene_5946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGGTGTGTCTCATC	9154	False	NA	NA	False	NA	NA	NA	69432490	69432785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69432500_69432800
m54284U_201205_001509/59312067/ccs	chr2	+	3402	1	NIC	ENSMUSG00000036992.11	novel	1116	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	False	NA	15	True	AATAAA	-19	NA	148514545	148517947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_148514500_148517900
m54284U_201205_001509/59506858/ccs	chr2	-	269	1	Intergenic	novelGene_956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATTTTATTAAGAAATA	NA	False	NA	NA	False	AATAAA	-14	NA	101499954	101499685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_101499700_101500000
m54284U_201205_001509/59572268/ccs	chr6	+	189	1	Intergenic	novelGene_3419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCCCCAAAGTTCTCG	5798	False	NA	NA	False	NA	NA	NA	113218633	113218822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_113218600_113218800
m54284U_201205_001509/59574484/ccs	chr11	-	190	1	Intergenic	novelGene_6269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCTTGCTGCTCTGGCA	1610	False	NA	NA	False	NA	NA	NA	97205399	97205209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97205200_97205400
m54284U_201205_001509/59638749/ccs	chr8	-	2229	5	NIC	ENSMUSG00000040028.11	novel	5743	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	122	junction_1	652.396878824539	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTT	NA	False	NA	-1	True	ATTAAA	-21	NA	4375086	4338342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_4339925_4351684_4351839_4354926_4355031_4361598_4361787_4374885
m54284U_201205_001509/59638788/ccs	chr19	-	180	1	Intergenic	novelGene_9248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAGAATAGAAATA	NA	False	NA	NA	False	NA	NA	NA	39020117	39019937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_39019900_39020100
m54284U_201205_001509/59769982/ccs	chr11	+	166	1	Intergenic	novelGene_5885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTAAAAAAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	60674120	60674286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_60674100_60674300
m54284U_201205_001509/59834938/ccs	chr11	-	3325	8	NIC	ENSMUSG00000059796.17	novel	1774	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	9657	junction_7	1598.96652847509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69563143	69557762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69561574_69561753_69561803_69563104
m54284U_201205_001509/59900308/ccs	chr5	-	175	1	Intergenic	novelGene_2741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	108195478	108195303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108195300_108195500
m54284U_201205_001509/59901366/ccs	chr9	+	2420	19	NIC	ENSMUSG00000031928.16	novel	3286	20	NA	NA	0	-682	combination_of_known_junctions	FALSE	canonical	2	6	junction_7	88.6030299345358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCGTTGTTCATTTCT	NA	False	NA	17	True	NA	NA	NA	14695997	14745260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_14696104_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
m54284U_201205_001509/60098787/ccs	chr16	+	193	1	Intergenic	novelGene_8304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTATGCGTTGGCCAA	NA	False	NA	NA	False	NA	NA	NA	85582389	85582582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_85582400_85582600
m54284U_201205_001509/60230193/ccs	chr10	-	176	1	Intergenic	novelGene_5597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTAAAAAATGTCAGCA	NA	False	NA	NA	False	NA	NA	NA	126762535	126762359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_126762400_126762500
m54284U_201205_001509/60294670/ccs	chr11	-	186	1	Intergenic	novelGene_6138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCTGATTTATAAAAC	NA	False	NA	NA	False	NA	NA	NA	84960179	84959993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_84960000_84960200
m54284U_201205_001509/60425422/ccs	chr10	+	197	1	Intergenic	novelGene_5228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGATGAGTGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	23690820	23691017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_23690800_23691000
m54284U_201205_001509/60623250/ccs	chr9	-	180	1	Intergenic	novelGene_5053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAGATTTTTAAAAAA	2990	False	NA	NA	False	NA	NA	NA	103486372	103486192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_103486200_103486400
m54284U_201205_001509/60687434/ccs	chr18	-	1276	1	Antisense	novelGene_ENSMUSG00000054477.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTGTGTCCTTATTGA	NA	False	NA	1	True	AATAAA	-28	NA	45692400	45691124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_-_45691100_45692400
m54284U_201205_001509/60687914/ccs	chr10	-	191	1	Intergenic	novelGene_5215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATAATTTTAGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	19982687	19982496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_19982500_19982700
m54284U_201205_001509/60751924/ccs	chr4	+	6743	10	NIC	ENSMUSG00000028282.13	novel	6799	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	84.5773807429228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTAGTATGCTTCTT	2	True	NA	7	True	AATAAA	-20	NA	32615450	32653265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_32615740_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
m54284U_201205_001509/60754603/ccs	chr7	-	3652	21	NIC	ENSMUSG00000005610.18	novel	7995	22	NA	NA	0	0	intron_retention	FALSE	canonical	1	45	junction_9	1352.13643819697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTTGTACATGACTTCA	NA	False	NA	-19	True	AATAAA	-16	NA	110682237	110671138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
m54284U_201205_001509/60883340/ccs	chr3	-	199	1	Intergenic	novelGene_1374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGGAAGACACTGTGTG	NA	False	NA	NA	False	NA	NA	NA	31196454	31196255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_31196300_31196500
m54284U_201205_001509/61146180/ccs	chrX	-	2565	1	NIC	ENSMUSG00000037475.16	novel	7622	39	NA	NA	0	-29451	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	41000778	40998213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_40998200_41000800
m54284U_201205_001509/61147298/ccs	chr14	-	233	1	Intergenic	novelGene_7500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATTAAATTCAAACTAT	9525	False	NA	NA	False	NA	NA	NA	61361385	61361152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_61361200_61361400
m54284U_201205_001509/61212755/ccs	chr3	-	5851	1	FSM	ENSMUSG00000048109.11	ENSMUST00000197769.2	5967	1	1306	-1190	1306	-524	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTTTCTGCCTGGA	453	False	NA	-9	True	AATAAA	-16	NA	107239111	107233260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_107233300_107239100
m54284U_201205_001509/61213503/ccs	chr1	-	5067	1	NIC	ENSMUSG00000019699.17	novel	1511	13	NA	NA	223628	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATTTGTTTTCTCATT	NA	False	NA	NA	False	AATAAA	-21	NA	176852705	176847638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_176847600_176852700
m54284U_201205_001509/61277746/ccs	chr6	+	2214	11	NIC	ENSMUSG00000030007.9	novel	2441	12	NA	NA	0	-68	intron_retention	FALSE	canonical	3	5555	junction_1	308.502917328183	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCCTGCCTTAGAATT	5188	False	NA	38	True	AATAAA	-36	NA	85429073	85445389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444768_85445034
m54284U_201205_001509/61342240/ccs	chr10	+	2976	8	NIC	ENSMUSG00000034889.9	novel	2715	9	NA	NA	91	0	intron_retention	FALSE	canonical	3	160	junction_2	15.6283363784884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTCTGATCTGAGTCA	5560	False	NA	16	True	AATAGA	-15	NA	81157027	81162076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_81157281_81158271_81158840_81158954_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
m54284U_201205_001509/61407810/ccs	chr15	-	3273	18	NIC	ENSMUSG00000078937.9	novel	2895	19	NA	NA	0	-216	intron_retention	FALSE	canonical	3	54	junction_14	10.9708642135292	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCTGTTAGGTGCCTAT	5216	False	NA	NA	False	AATAAA	-22	NA	89310066	89300823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_89301183_89301347_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306327_89306413_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310000
m54284U_201205_001509/61473691/ccs	chr6	+	247	1	Intergenic	novelGene_3443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATGTCAATTTAAAAA	NA	False	NA	NA	False	AATAAA	-7	NA	119378084	119378331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_119378100_119378300
m54284U_201205_001509/61539110/ccs	chr8	+	1050	1	NIC	ENSMUSG00000025809.16	novel	3815	16	NA	NA	21	-23833	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAGAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	129412258	129413308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_129412300_129413300
m54284U_201205_001509/61539239/ccs	chr5	+	223	1	Intergenic	novelGene_2810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTTGTATCTTGATTT	NA	False	NA	NA	False	TTTAAA	-27	NA	115802507	115802730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_115802500_115802700
m54284U_201205_001509/61604857/ccs	chr2	+	5653	23	NIC	ENSMUSG00000039844.21	novel	4205	24	NA	NA	-174	0	intron_retention	FALSE	canonical	2	7	junction_1	91.0790797073103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29533652	29630375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29533927_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
m54284U_201205_001509/61604985/ccs	chr1	+	175	1	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	13122115	13122290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_13122100_13122300
m54284U_201205_001509/6160861/ccs	chr10	-	178	1	Intergenic	novelGene_5174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAACAACAACAA	NA	False	NA	NA	False	NA	NA	NA	4178377	4178199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_4178200_4178400
m54284U_201205_001509/61736536/ccs	chr4	-	189	1	Intergenic	novelGene_2324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGTAGAAGAGGGT	NA	False	NA	NA	False	NA	NA	NA	144129121	144128932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_144128900_144129100
m54284U_201205_001509/61802810/ccs	chr8	+	185	1	Intergenic	novelGene_4186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATTTTATGAATATAA	3653	False	NA	NA	False	NA	NA	NA	3540474	3540659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_3540500_3540700
m54284U_201205_001509/61867007/ccs	chr4	-	190	1	Intergenic	novelGene_2013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGAGAACAGACTATTC	NA	False	NA	NA	False	NA	NA	NA	116094909	116094719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116094700_116094900
m54284U_201205_001509/61868196/ccs	chr4	-	2270	8	NIC	ENSMUSG00000040606.15	novel	3843	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	83.791285894398	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCATTTAATTTATTT	NA	False	NA	-30	True	AAAAAG	-13	NA	141966712	141868118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_141869108_141870604_141870656_141874333_141874457_141878156_141878347_141881740_141881912_141886354_141886492_141937325_141937518_141966295
m54284U_201205_001509/61868494/ccs	chr16	-	177	1	Intergenic	novelGene_8139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATGAATTAACAAACAA	3559	False	NA	NA	False	NA	NA	NA	20298820	20298643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20298600_20298800
m54284U_201205_001509/61933740/ccs	chr11	-	182	1	Intergenic	novelGene_6471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAAAGCATTTGC	-8	True	NA	NA	False	NA	NA	NA	116168179	116167997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116168000_116168200
m54284U_201205_001509/61933762/ccs	chr1	-	191	1	Intergenic	novelGene_193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTATGCAATGTACTT	NA	False	NA	NA	False	NA	NA	NA	74763630	74763439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_74763400_74763600
m54284U_201205_001509/61934308/ccs	chr2	+	1573	11	NNC	ENSMUSG00000026784.15	novel	1642	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_7	75.4903967402477	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTTGTCTTTGTTTCAC	5681	False	NA	19	True	AATAAA	-21	NA	22785606	22830278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805541_22819551_22819633_22819755_22819870_22825570_22825652_22829834
m54284U_201205_001509/62195512/ccs	chr9	-	198	1	Intergenic	novelGene_4958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTCATCAAACCAAGTA	NA	False	NA	NA	False	NA	NA	NA	77750123	77749925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_77749900_77750100
m54284U_201205_001509/62195888/ccs	chr11	+	180	1	Intergenic	novelGene_5799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAAAGGGGAGGGGGGCT	NA	False	NA	NA	False	NA	NA	NA	50104930	50105110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_50104900_50105100
m54284U_201205_001509/6226228/ccs	chr9	-	4655	5	NIC	ENSMUSG00000040813.17	novel	1391	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	151	junction_4	128.369340186822	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGAGTTGGTTTT	7868	False	NA	-6	True	AATAAA	-22	NA	106563126	106535950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
m54284U_201205_001509/6226335/ccs	chr17	-	199	1	Intergenic	novelGene_8688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTTCTTGATAATTCAT	NA	False	NA	NA	False	NA	NA	NA	66809860	66809661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66809700_66809900
m54284U_201205_001509/6227112/ccs	chr4	-	202	2	Intergenic	novelGene_1767	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACTCCTGCGCCATCTCT	6688	False	NA	NA	False	NA	NA	NA	21760507	21753061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_21753215_21760458
m54284U_201205_001509/62653435/ccs	chr8	+	2418	17	NNC	ENSMUSG00000031864.17	novel	4201	17	NA	NA	0	174	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_7	165.973348293484	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTAGGGTACATTTGTCT	NA	False	NA	44	True	TTTAAA	-21	NA	69246625	69280327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260116_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
m54284U_201205_001509/62850662/ccs	chr3	+	230	1	Intergenic	novelGene_1547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAACTCGTTCTTTATA	NA	False	NA	NA	False	NA	NA	NA	91870049	91870279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_91870000_91870300
m54284U_201205_001509/62914729/ccs	chr1	+	195	1	Intergenic	novelGene_366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTCTTGCAGGGGAC	NA	False	NA	NA	False	NA	NA	NA	143711888	143712083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_143711900_143712100
m54284U_201205_001509/62914801/ccs	chr15	+	176	1	Intergenic	novelGene_7940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTAAAGAGTAAA	NA	False	NA	NA	False	NA	NA	NA	98563167	98563343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98563200_98563300
m54284U_201205_001509/62917157/ccs	chr13	-	181	1	Intergenic	novelGene_7255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGCTCTTGGGCAGGT	NA	False	NA	NA	False	NA	NA	NA	96917847	96917666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_96917700_96917800
m54284U_201205_001509/6293938/ccs	chr11	-	174	1	Intergenic	novelGene_5752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	25973838	25973664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_25973700_25973800
m54284U_201205_001509/62981868/ccs	chr8	-	170	1	Intergenic	novelGene_4402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATCCCAAATAT	NA	False	NA	NA	False	NA	NA	NA	89806999	89806829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_89806800_89807000
m54284U_201205_001509/63047615/ccs	chr11	+	3960	12	NNC	ENSMUSG00000017421.19	novel	1562	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	28	junction_2	358.33676851451	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGATACATGATTGAAT	NA	False	NA	130	True	AATAAA	-18	NA	80274128	80287074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_80274322_80276728_80276856_80277005_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
m54284U_201205_001509/63178927/ccs	chr18	+	217	1	Intergenic	novelGene_8830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAACATGATTTGAT	NA	False	NA	NA	False	NA	NA	NA	20850906	20851123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_20850900_20851100
m54284U_201205_001509/63244411/ccs	chr11	-	3079	15	NNC	ENSMUSG00000020516.16	novel	5531	15	NA	NA	0	706	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_6	68.2232230495255	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGCCTTAAGGAGCATT	NA	False	NA	NA	False	AATAAA	-31	NA	86435631	86392152	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404121_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
m54284U_201205_001509/63374491/ccs	chr17	-	207	1	Intergenic	novelGene_8668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTCGATGTTTATGTG	NA	False	NA	NA	False	NA	NA	NA	59421784	59421577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_59421600_59421800
m54284U_201205_001509/63374960/ccs	chr5	+	197	1	Intergenic	novelGene_2880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGATGGGCTCTTTCAAT	7617	False	NA	NA	False	NA	NA	NA	123352548	123352745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_123352500_123352700
m54284U_201205_001509/63376025/ccs	chr2	-	175	1	Intergenic	novelGene_1252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAAATAAAAATT	NA	False	NA	NA	False	NA	NA	NA	167508013	167507838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_167507800_167508000
m54284U_201205_001509/63440322/ccs	chr9	-	195	1	Intergenic	novelGene_4914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAGAAAA	3109	False	NA	NA	False	NA	NA	NA	70485009	70484814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_70484800_70485000
m54284U_201205_001509/63507026/ccs	chr2	+	190	1	Intergenic	novelGene_698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATTCAAACCACCACACT	NA	False	NA	NA	False	NA	NA	NA	31118885	31119075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_31118900_31119100
m54284U_201205_001509/63507240/ccs	chr6	-	187	1	Intergenic	novelGene_3300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGACTTTAAATCATAAT	8901	False	NA	NA	False	NA	NA	NA	65013846	65013659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_65013700_65013800
m54284U_201205_001509/63571620/ccs	chr2	+	6154	1	Antisense	novelGene_ENSMUSG00000035949.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATCTCATATTTGTCT	NA	False	NA	NA	False	GATAAA	-21	NA	34692370	34698524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_+_34692400_34698500
m54284U_201205_001509/63769413/ccs	chr8	+	3464	1	NIC	ENSMUSG00000041203.10	novel	902	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGGTTTATCTT	NA	False	NA	21	True	AGTAAA	-21	NA	85753451	85756915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85753500_85756900
m54284U_201205_001509/63900322/ccs	chr19	-	2911	9	NIC	ENSMUSG00000025223.16	novel	2108	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	657	junction_1	56.3781872713197	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTCATGTTCCCCTATT	6718	False	NA	-30	True	ATTAAA	-21	NA	46033653	46021031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024591_46024701_46024805_46033268
m54284U_201205_001509/63964076/ccs	chr1	-	5590	1	ISM	ENSMUSG00000026565.19	ENSMUST00000111427.9	13050	17	64205	0	9417	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACATTGTCTGTGTCTCT	9781	False	NA	-9	True	ATTAAA	-17	NA	165698312	165692722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_165692700_165698300
m54284U_201205_001509/64094958/ccs	chr16	-	185	1	Intergenic	novelGene_8063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTTAAAAAAATTAAAAA	5218	False	NA	NA	False	NA	NA	NA	11283087	11282902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_11282900_11283100
m54284U_201205_001509/64097023/ccs	chr7	+	176	1	Intergenic	novelGene_3704	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATTAAAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	24565755	24565931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_24565800_24565900
m54284U_201205_001509/64160686/ccs	chr1	-	185	1	Intergenic	novelGene_153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGGATGAAAGCGGCCC	NA	False	NA	NA	False	AATAAA	-7	NA	60399625	60399440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_60399400_60399600
m54284U_201205_001509/6423724/ccs	chr2	+	3859	15	NNC	ENSMUSG00000027395.16	novel	3998	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	72.6723145779908	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGATTTTTATTTT	NA	False	NA	15	True	AATAAA	-16	NA	128942946	128968514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959954_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
m54284U_201205_001509/64291745/ccs	chrX	-	181	1	Intergenic	novelGene_9403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAGAATATGAGAACTT	NA	False	NA	NA	False	NA	NA	NA	19569477	19569296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_19569300_19569500
m54284U_201205_001509/64422193/ccs	chr2	-	3820	1	Intergenic	novelGene_1195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	3294	False	NA	NA	False	NA	NA	NA	157498038	157494218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_157494200_157498000
m54284U_201205_001509/64618814/ccs	chr17	+	197	1	Intergenic	novelGene_8765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAATTAGAGCTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	85218647	85218844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_85218600_85218800
m54284U_201205_001509/64620377/ccs	chr10	-	1643	3	NIC	ENSMUSG00000097134.3	novel	2229	4	NA	NA	0	298	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	9	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTATTCTATTTCTT	NA	False	NA	-3	True	AATAAA	-16	NA	66753518	66747969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_66749445_66751634_66751739_66753454
m54284U_201205_001509/64750726/ccs	chr4	-	1875	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	-65	1374	-65	-1374	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGTATCTGTGGATTA	7145	False	NA	-1	True	ACTAAA	-18	NA	156077171	156075296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_156075300_156077200
m54284U_201205_001509/64816257/ccs	chr2	-	5212	1	Genic_Genomic	ENSMUSG00000086563.2	novel	NA	NA	NA	NA	-31	2840	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTATTTGGCATTCTG	NA	False	NA	NA	False	NA	NA	NA	150548827	150543615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_150543600_150548800
m54284U_201205_001509/6488134/ccs	chr7	-	1139	2	NNC	ENSMUSG00000108387.2	novel	235	2	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTCCTCTGTAAT	NA	False	NA	NA	False	AATAAA	-15	NA	78922682	78921439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_78922092_78922195
m54284U_201205_001509/64947633/ccs	chr8	+	7235	41	NIC	ENSMUSG00000004677.18	novel	7082	40	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	36.0767844326514	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTCTTGCTGCTTGGG	NA	False	NA	16	True	AATAAA	-19	NA	71725357	71813357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71789519_71789610_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801546_71801578_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807160_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
m54284U_201205_001509/65470715/ccs	chr18	+	189	1	Intergenic	novelGene_8924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACCATGGGGAGCATG	NA	False	NA	NA	False	NA	NA	NA	38480359	38480548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_38480400_38480500
m54284U_201205_001509/65536465/ccs	chr15	-	159	1	Intergenic	novelGene_7610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAATAAAAATAAATT	NA	False	NA	NA	False	NA	NA	NA	5181155	5180996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_5181000_5181200
m54284U_201205_001509/6556301/ccs	chr11	+	194	1	Intergenic	novelGene_6338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAGAACTAATTTCA	NA	False	NA	NA	False	NA	NA	NA	101438091	101438285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101438100_101438300
m54284U_201205_001509/65603385/ccs	chr4	-	6450	8	NIC	ENSMUSG00000028693.16	novel	2520	16	NA	NA	-4819	0	intron_retention	FALSE	canonical	3	1005	junction_6	130.189657572234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCTTTGATGGCTTT	NA	False	NA	-7	True	AATAAA	-15	NA	116468264	116458805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461549_116461937_116462012_116462105_116462192_116462880
m54284U_201205_001509/65667934/ccs	chr11	+	187	1	Intergenic	novelGene_5958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAAAATTAAGGATGG	NA	False	NA	NA	False	NA	NA	NA	70302273	70302460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_70302300_70302500
m54284U_201205_001509/65734070/ccs	chr15	-	2316	1	Intergenic	novelGene_7737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGATATAAACAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	60466278	60463962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_60464000_60466300
m54284U_201205_001509/65734867/ccs	chr19	-	180	1	Intergenic	novelGene_9172	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAAGGATTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	19473370	19473190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_19473200_19473400
m54284U_201205_001509/65799955/ccs	chr7	-	5343	10	NIC	ENSMUSG00000025586.18	novel	3111	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	48	junction_6	9.89325746202314	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTAGTTTTGTCTCTG	NA	False	NA	-2	True	AATAAA	-13	NA	81104506	80996775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_80999621_81000092_81000188_81001491_81001691_81005622_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
m54284U_201205_001509/65865027/ccs	chr17	-	131	1	FSM	ENSMUSG00002075486.1	ENSMUST00020183150.1	110	1	59	-80	59	80	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTCCCAGGTGAATTA	NA	False	NA	NA	False	ATTAAA	-23	NA	21504415	21504284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_21504300_21504400
m54284U_201205_001509/65930925/ccs	chr17	-	161	1	Intergenic	novelGene_8523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATATGAGTTGTTTGGTTT	9220	False	NA	NA	False	NA	NA	NA	32514853	32514692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_32514700_32514900
m54284U_201205_001509/65996894/ccs	chr6	+	2908	11	NIC	ENSMUSG00000004270.14	novel	2281	13	NA	NA	0	162	intron_retention	FALSE	canonical	3	738	junction_2	60.8510476491572	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGACTGCTTTCTTTCA	NA	False	NA	42	True	GATAAA	-36	NA	124640134	124681142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
m54284U_201205_001509/66061819/ccs	chr4	-	217	1	Intergenic	novelGene_2412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTGTGCATTGTTAT	NA	False	NA	NA	False	NA	NA	NA	152293090	152292873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_152292900_152293100
m54284U_201205_001509/66128676/ccs	chr9	+	118	1	Intergenic	novelGene_4823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGTTCAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	59197563	59197681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59197600_59197700
m54284U_201205_001509/66192367/ccs	chr5	+	2945	1	NIC	ENSMUSG00000060152.15	novel	1025	6	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCGTGTGGTTCGAG	NA	False	NA	36	True	AATAAA	-38	NA	115376105	115379050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_115376100_115379000
m54284U_201205_001509/66259074/ccs	chr4	-	218	1	Intergenic	novelGene_2341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGATAACCACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	146308792	146308574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146308600_146308800
m54284U_201205_001509/66519829/ccs	chrX	-	2381	14	NNC	ENSMUSG00000031297.15	novel	2750	13	NA	NA	193	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_13	598.263364459531	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACCTGTCCTGTTCTT	NA	False	NA	NA	False	ATTAAA	-23	NA	100129433	100122815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126471_100126753_100126913_100127476_100127881_100128877_100129064_100129193_100129261_100129344
m54284U_201205_001509/66521806/ccs	chr13	-	1268	1	NIC	ENSMUSG00000025453.19	novel	3122	15	NA	NA	70130	-2152	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCGTACACACAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	119475403	119474135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_119474100_119475400
m54284U_201205_001509/66679/ccs	chr8	-	2853	5	NIC	ENSMUSG00000015341.18	novel	1792	6	NA	NA	0	0	intron_retention	TRUE	canonical	3	715	junction_4	260.766658144787	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTCTTGTCTTAGTCTA	NA	False	NA	-19	True	AATAAA	-1	NA	23747082	23731361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_23732648_23734746_23735981_23740264_23740418_23746689_23746823_23747035
m54284U_201205_001509/6686984/ccs	chr17	+	2707	1	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGGTGCTGTTACTTTA	NA	False	NA	9	True	AATAAA	-17	NA	15163491	15166198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_15163500_15166200
m54284U_201205_001509/6687210/ccs	chr3	+	205	1	Intergenic	novelGene_1588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGTCTCTTTAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	96993273	96993478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_96993300_96993500
m54284U_201205_001509/67045212/ccs	chr5	-	4775	1	Intergenic	novelGene_2457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAACATTCAATATAG	NA	False	NA	NA	False	AATACA	-42	NA	8445321	8440546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_8440500_8445300
m54284U_201205_001509/67109106/ccs	chr6	+	456	1	FSM	ENSMUSG00000047905.11	ENSMUST00000120174.2	465	1	125	-116	125	116	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTTTTGTTTTTAC	NA	False	NA	43	True	ATTAAA	-42	NA	67182727	67183183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_67182700_67183200
m54284U_201205_001509/67242624/ccs	chr13	-	186	1	Intergenic	novelGene_7052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCTGCACAATTACTA	NA	False	NA	NA	False	NA	NA	NA	45174097	45173911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_45173900_45174100
m54284U_201205_001509/67307832/ccs	chr11	+	3450	28	NNC	ENSMUSG00000020464.16	novel	2707	28	NA	NA	0	770	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	188.930111696426	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATTTAGTAGTGACC	NA	False	NA	NA	False	AATGAA	-18	NA	29080743	29112598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_29080919_29082844_29082906_29083855_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103258_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
m54284U_201205_001509/6751212/ccs	chr3	-	176	1	Intergenic	novelGene_1684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	129879955	129879779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_129879800_129880000
m54284U_201205_001509/6752259/ccs	chr5	+	229	1	Intergenic	novelGene_2529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGCTACAAATTGGGA	NA	False	NA	NA	False	NA	NA	NA	32964108	32964337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_32964100_32964300
m54284U_201205_001509/67567618/ccs	chr11	+	3325	6	NIC	ENSMUSG00000038366.16	novel	3540	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	257.547354868964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	4563	False	NA	10	True	AATAAA	-21	NA	97690497	97729590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_97690689_97697650_97697746_97706523_97706609_97724371_97724529_97724909_97725014_97726897
m54284U_201205_001509/67633322/ccs	chr2	-	1814	1	Intergenic	novelGene_1027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGAACCTCACCACTTA	NA	False	NA	NA	False	AAAAAG	-15	NA	121246922	121245108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_121245100_121246900
m54284U_201205_001509/67635691/ccs	chr4	-	965	7	NNC	ENSMUSG00000028568.17	novel	624	7	NA	NA	0	274	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	515.895149769365	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTTTTTTTCCTAAC	NA	False	NA	NA	False	AATAAA	-17	NA	108690761	108673640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108688902_108688926_108690704
m54284U_201205_001509/67765747/ccs	chr11	+	3429	12	NNC	ENSMUSG00000006169.21	novel	3452	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	169.310414708977	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCCCGCCTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	45742790	45801452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_45742997_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
m54284U_201205_001509/67895318/ccs	chr17	+	4506	9	NIC	ENSMUSG00000041130.11	novel	3283	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	262	junction_7	126.765962998748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGCTGGTGTTCTGAGTC	1236	False	NA	12	True	AATAAA	-20	NA	24888720	24900990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24898199_24898294_24898380_24898482_24899773_24899854_24900006_24900082
m54284U_201205_001509/67895565/ccs	chr5	-	173	1	Intergenic	novelGene_2819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAAGAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	117374522	117374349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_117374300_117374500
m54284U_201205_001509/67897391/ccs	chrX	-	4125	1	NIC	ENSMUSG00000036932.15	novel	3364	15	NA	NA	0	-23844	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAGGTAAACTTAGAG	NA	False	NA	NA	False	AAAAAG	-7	NA	47602303	47598178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_47598200_47602300
m54284U_201205_001509/67897520/ccs	chr5	-	196	1	Intergenic	novelGene_2752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGTGACAGCAGATGCT	4605	False	NA	NA	False	NA	NA	NA	108656197	108656001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108656000_108656200
m54284U_201205_001509/68158899/ccs	chr17	+	3767	27	NIC	ENSMUSG00000013787.16	novel	3882	28	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_23	100.300406767037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGATTGTTTCAGG	6670	False	NA	20	True	AATAAA	-21	NA	35117444	35133028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130554_35130642_35131364_35131444_35131609_35131786_35132615
m54284U_201205_001509/6817438/ccs	chr8	-	94	1	Intergenic	novelGene_4300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAAAATGAGTTGGGTAG	NA	False	NA	NA	False	NA	NA	NA	61307328	61307234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_61307200_61307300
m54284U_201205_001509/6817738/ccs	chr12	+	182	1	Intergenic	novelGene_6648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTAGTTCAGCTATTTA	NA	False	NA	NA	False	NA	NA	NA	54935262	54935444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_54935300_54935400
m54284U_201205_001509/68356582/ccs	chr10	-	5232	12	NIC	ENSMUSG00000020228.12	novel	4554	13	NA	NA	53	0	intron_retention	FALSE	canonical	3	54	junction_6	7.36644166541196	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCAGTCTGTGGTTTTCT	NA	False	NA	-3	True	NA	NA	NA	119948839	119919512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_119920879_119925312_119925781_119927513_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
m54284U_201205_001509/68486109/ccs	chr2	-	1545	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	-79	477	-79	-477	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTATAAGGTTGTAGT	NA	False	NA	NA	False	AATAAA	-20	NA	129041193	129039648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_129039600_129041200
m54284U_201205_001509/68487753/ccs	chr11	+	4477	1	NIC	ENSMUSG00000020783.15	novel	12106	13	NA	NA	0	-4388	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTGGCTAGGAGATTTA	NA	False	NA	NA	False	NA	NA	NA	72938698	72943175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_72938700_72943200
m54284U_201205_001509/68618217/ccs	chr17	-	188	1	Intergenic	novelGene_8714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACTCTTATTCTGAGAAC	NA	False	NA	NA	False	NA	NA	NA	71935996	71935808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71935800_71936000
m54284U_201205_001509/68682763/ccs	chr4	-	4472	10	NIC	ENSMUSG00000053841.16	novel	4569	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	103.515967635701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATCTCAGCCAATCGA	7860	False	NA	-10	True	ATTAAA	-17	NA	129534858	129519875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129533021_129533361_129534048_129534221_129534763
m54284U_201205_001509/68683992/ccs	chr17	+	2270	15	NIC	ENSMUSG00000007564.16	novel	2410	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	39	junction_14	332.623806933261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTAGTAATCGGAATGG	NA	False	NA	39	True	AATAAA	-24	NA	21165748	21186178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185629_21185716
m54284U_201205_001509/6881418/ccs	chr13	+	206	1	Intergenic	novelGene_7114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATTTATTTTTTCCAGC	7588	False	NA	NA	False	AATGAA	-10	NA	55936919	55937125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55936900_55937100
m54284U_201205_001509/68815448/ccs	chr2	-	166	1	Intergenic	novelGene_1064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACATTTTAATTGACTT	NA	False	NA	NA	False	NA	NA	NA	128991618	128991452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_128991500_128991600
m54284U_201205_001509/68878428/ccs	chr8	-	169	1	Intergenic	novelGene_4423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAGAAAAAAGAAAGA	NA	False	NA	1	True	NA	NA	NA	96580974	96580805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_96580800_96581000
m54284U_201205_001509/68878982/ccs	chr6	+	2693	1	Intergenic	novelGene_3288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGTGTGGTACTTAA	6166	False	NA	NA	False	NA	NA	NA	54872626	54875319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_54872600_54875300
m54284U_201205_001509/69009701/ccs	chr15	-	164	1	Intergenic	novelGene_7668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	31640750	31640586	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_31640600_31640800
m54284U_201205_001509/69207749/ccs	chr5	+	3335	15	NIC	ENSMUSG00000005514.15	novel	2636	16	NA	NA	0	0	intron_retention	FALSE	canonical	3	231	junction_8	23.9200411234374	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTGTTGATTGAG	2023	False	NA	14	True	AATAAA	-14	NA	135718011	135764180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
m54284U_201205_001509/69271765/ccs	chr13	+	191	1	Intergenic	novelGene_7258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACCTTAAAAATTCTTT	NA	False	NA	NA	False	NA	NA	NA	97210864	97211055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97210900_97211100
m54284U_201205_001509/69272495/ccs	chr14	-	197	1	Intergenic	novelGene_7484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGTAAAATAATGTAG	NA	False	NA	NA	False	NA	NA	NA	57134550	57134353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_57134400_57134600
m54284U_201205_001509/69274285/ccs	chr17	-	191	1	Intergenic	novelGene_8405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTATTTATTTTACGTAT	NA	False	NA	NA	False	NA	NA	NA	24279937	24279746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24279700_24279900
m54284U_201205_001509/69337177/ccs	chr1	-	4741	22	NIC	ENSMUSG00000010453.13	novel	4663	21	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_8	57.8086216294237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	False	NA	-7	True	AATAAA	-21	NA	36408262	36374810	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36386297_36386376_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
m54284U_201205_001509/69338640/ccs	chr6	+	180	1	Intergenic	novelGene_3206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTGAAAAGAAAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	38427788	38427968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38427800_38428000
m54284U_201205_001509/69468254/ccs	chr8	+	3829	1	NIC	ENSMUSG00000056019.13	novel	7186	4	NA	NA	1469	1649	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTTTGTTTTTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	72642576	72646405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_72642600_72646400
m54284U_201205_001509/6948882/ccs	chr18	+	7327	20	NIC	ENSMUSG00000024498.17	novel	4101	21	NA	NA	0	0	intron_retention	FALSE	canonical	3	436	junction_6	88.8584731741866	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGATTGTAAATGATTAT	NA	False	NA	10	True	AATAAA	-17	NA	42644565	42708619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
m54284U_201205_001509/69535349/ccs	chr10	+	175	1	Intergenic	novelGene_5594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGGGTGGTTGGAAAGA	NA	False	NA	NA	False	NA	NA	NA	126737539	126737714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_126737500_126737700
m54284U_201205_001509/69667624/ccs	chr7	-	195	1	Intergenic	novelGene_3843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCTCATGTCTTGTCCC	NA	False	NA	NA	False	NA	NA	NA	45155084	45154889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_45154900_45155100
m54284U_201205_001509/69863676/ccs	chr19	+	2012	1	NIC	ENSMUSG00000071661.8	novel	2004	2	NA	NA	279	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGAACTGGTGTTG	5707	False	NA	11	True	CATAAA	-16	NA	8780197	8782209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8780200_8782200
m54284U_201205_001509/69993020/ccs	chr10	-	204	1	Intergenic	novelGene_5294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGGTGAAATTTCCAA	NA	False	NA	NA	False	NA	NA	NA	49310205	49310001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_49310000_49310200
m54284U_201205_001509/70058701/ccs	chr2	-	175	1	Intergenic	novelGene_1147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGCATCCCTAGTGCT	NA	False	NA	NA	False	NA	NA	NA	154515294	154515119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_154515100_154515300
m54284U_201205_001509/70125052/ccs	chr12	+	177	1	Intergenic	novelGene_6871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAACTGTAAT	NA	False	NA	NA	False	NA	NA	NA	105083368	105083545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_105083400_105083500
m54284U_201205_001509/70191581/ccs	chr12	+	2429	7	NNC	ENSMUSG00000057469.9	novel	2418	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_6	94.3264131737353	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGCGTGCCTGTGTTTC	7396	False	NA	4	True	ATTAAA	-15	NA	16860963	16876753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875368
m54284U_201205_001509/70254869/ccs	chr15	-	157	1	Antisense	novelGene_ENSMUSG00000039065.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	31619315	31619158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_31619200_31619300
m54284U_201205_001509/70257265/ccs	chr12	-	3418	1	Intergenic	novelGene_6623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	41449155	41445737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_41445700_41449200
m54284U_201205_001509/70518985/ccs	chr6	-	136	1	Intergenic	novelGene_3281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTTTAAAAAAAAAA	NA	False	NA	-2	True	NA	NA	NA	54116576	54116440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_54116400_54116600
m54284U_201205_001509/70648658/ccs	chr9	-	7801	57	NIC	ENSMUSG00000032560.15	novel	8012	56	NA	NA	0	-320	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	46.7717536422947	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATATGTATGTTCTGTA	NA	False	NA	-4	True	AATAAA	-22	NA	104140129	104028800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_104029623_104030466_104030576_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
m54284U_201205_001509/70650416/ccs	chr1	-	1396	1	FSM	ENSMUSG00000100954.6	ENSMUST00000186597.2	2498	1	-22	1124	-22	-1124	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCCCCCTCTGGTA	NA	False	NA	NA	False	CATAAA	-18	NA	151221004	151219608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_151219600_151221000
m54284U_201205_001509/70714004/ccs	chr2	-	175	1	Intergenic	novelGene_937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAGAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	91606618	91606443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91606400_91606600
m54284U_201205_001509/70715851/ccs	chr6	-	178	1	Intergenic	novelGene_3249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	47834843	47834665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47834700_47834800
m54284U_201205_001509/70780262/ccs	chr12	+	187	1	Intergenic	novelGene_6925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCACATAAGGAGGTATTC	NA	False	NA	NA	False	NA	NA	NA	111641164	111641351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111641200_111641400
m54284U_201205_001509/70845963/ccs	chr2	-	2879	1	NIC	ENSMUSG00000018770.10	novel	723	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGTGATTTGTACT	NA	False	NA	-21	True	ATTAAA	-15	NA	73741669	73738790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_73738800_73741700
m54284U_201205_001509/70910798/ccs	chr3	+	175	1	Intergenic	novelGene_1652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGTTAAGAAA	NA	False	NA	NA	False	NA	NA	NA	121088205	121088380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_121088200_121088400
m54284U_201205_001509/70978061/ccs	chr12	-	215	1	Intergenic	novelGene_6590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCCTAACTGGGAGTC	NA	False	NA	NA	False	NA	NA	NA	21525481	21525266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_21525300_21525500
m54284U_201205_001509/71042168/ccs	chr12	-	184	1	Intergenic	novelGene_6683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATACAGTGTTTTAAATG	6879	False	NA	NA	False	NA	NA	NA	69395965	69395781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_69395800_69396000
m54284U_201205_001509/71106956/ccs	chr8	+	180	1	Intergenic	novelGene_4198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAGATAACCCTTTTA	NA	False	NA	NA	False	NA	NA	NA	11575480	11575660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_11575500_11575700
m54284U_201205_001509/71108450/ccs	chr2	+	189	1	Intergenic	novelGene_939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGTCAGAGAGCTAAG	NA	False	NA	NA	False	NA	NA	NA	91639388	91639577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91639400_91639600
m54284U_201205_001509/71109126/ccs	chr2	-	3148	1	NIC	ENSMUSG00000015790.17	novel	1173	9	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTCAGTCTGAAACC	NA	False	NA	-5	True	AATAAA	-19	NA	26806542	26803394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_26803400_26806500
m54284U_201205_001509/71238101/ccs	chr12	+	1008	10	NIC	ENSMUSG00000060073.10	novel	875	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	320	junction_2	1171.34194436009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTGGGTAATTGAAGCT	4788	False	NA	5	True	ATTAAA	-16	NA	71021462	71041279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_71021542_71025506_71025590_71030097_71030217_71031266_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
m54284U_201205_001509/71238112/ccs	chr3	+	176	1	Intergenic	novelGene_1388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAAGAAATGTAA	NA	False	NA	NA	False	NA	NA	NA	41170081	41170257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_41170100_41170300
m54284U_201205_001509/71305440/ccs	chr13	-	2877	1	NIC	ENSMUSG00000113030.2	novel	558	5	NA	NA	3008	-25499	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACCAGTCAAGACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	18164110	18161233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_18161200_18164100
m54284U_201205_001509/7145377/ccs	chr11	+	176	1	Intergenic	novelGene_6221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAGTTAACAATA	3592	False	NA	NA	False	NA	NA	NA	95001503	95001679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95001500_95001700
m54284U_201205_001509/7145564/ccs	chr8	-	185	1	Intergenic	novelGene_4330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGATAATTAGC	NA	False	NA	NA	False	NA	NA	NA	71280164	71279979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_71280000_71280200
m54284U_201205_001509/71631978/ccs	chr9	+	1635	10	NIC	ENSMUSG00000010057.9	novel	1441	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	98	junction_4	12.0102836594415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGAGTACTGCTTCAGCC	NA	False	NA	13	True	AATAAA	-24	NA	107419443	107422905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422587_107422689
m54284U_201205_001509/71633040/ccs	chr3	-	184	1	Intergenic	novelGene_1371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTATATTCTAAAACCTC	NA	False	NA	NA	False	NA	NA	NA	31110362	31110178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_31110200_31110400
m54284U_201205_001509/71829321/ccs	chr8	+	2669	14	NNC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	366.515287022659	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAAATGACTCTGTGTTT	NA	False	NA	18	True	AATAAA	-22	NA	69541419	69566363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_69541547_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
m54284U_201205_001509/71893944/ccs	chr5	+	4157	24	NNC	ENSMUSG00000036817.15	novel	4134	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	276.026915758341	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	False	NA	33	True	AATAAA	-19	NA	139186423	139235595	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_139186455_139195838_139195894_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
m54284U_201205_001509/71961019/ccs	chr12	-	4232	7	NIC	ENSMUSG00000079036.11	novel	2154	8	NA	NA	0	0	intron_retention	FALSE	canonical	1	3	junction_1	106.492174986397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTATCTGTCTTTGAG	NA	False	NA	-53	True	AATAAA	-22	NA	87490609	87474846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_87478307_87480888_87480980_87485166_87485330_87487075_87487185_87488040_87488114_87488412_87488551_87490411
m54284U_201205_001509/71961212/ccs	chr9	-	189	1	Intergenic	novelGene_5075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACATGTCTACAAGGAGA	5952	False	NA	NA	False	NA	NA	NA	107866882	107866693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_107866700_107866900
m54284U_201205_001509/72090246/ccs	chr17	-	6534	1	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTCCAAACAGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	37321091	37314557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_37314600_37321100
m54284U_201205_001509/72222854/ccs	chr9	+	1648	10	NIC	ENSMUSG00000004100.13	novel	1670	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	766	junction_8	65.665820637528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGAGTCTTCACTCTG	NA	False	NA	13	True	AATAAA	-14	NA	20799562	20803474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802503_20802582_20802662_20802746_20803044_20803127
m54284U_201205_001509/72287649/ccs	chr6	-	294	1	Intergenic	novelGene_3098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCCGGTTTGTTGC	NA	False	NA	NA	False	NA	NA	NA	3405056	3404762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_3404800_3405100
m54284U_201205_001509/72418059/ccs	chr6	-	181	1	Intergenic	novelGene_3511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCATACTGCTCTTACA	4853	False	NA	NA	False	NA	NA	NA	125236817	125236636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_125236600_125236800
m54284U_201205_001509/72550716/ccs	chr8	-	1447	3	NNC	ENSMUSG00000031489.16	novel	669	4	NA	NA	-233	-15232	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	11.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGTCATGGTGTC	NA	False	NA	NA	False	NA	NA	NA	27740877	27734495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_27735521_27739175_27739238_27740517
m54284U_201205_001509/72681727/ccs	chr3	+	5864	1	ISM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	8215	950	5507	-950	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCATTGTCTCTGCCT	NA	False	NA	NA	False	AATAAA	-14	NA	33862195	33868059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_33862200_33868100
m54284U_201205_001509/72745755/ccs	chr2	+	5829	24	NIC	ENSMUSG00000039844.21	novel	6212	26	NA	NA	0	0	intron_retention	FALSE	canonical	3	6	junction_10	109.733239006744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCAGGCCTTC	NA	False	NA	17	True	AATAAA	-24	NA	29509781	29630375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600164_29600321_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
m54284U_201205_001509/72944446/ccs	chr2	+	184	1	Intergenic	novelGene_797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAAACATGATGAATTCA	NA	False	NA	NA	False	NA	NA	NA	53860480	53860664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_53860500_53860700
m54284U_201205_001509/73204355/ccs	chr17	-	187	1	Intergenic	novelGene_8396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTCCTTGATGGGTATA	NA	False	NA	NA	False	NA	NA	NA	23867306	23867119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_23867100_23867300
m54284U_201205_001509/73270114/ccs	chr16	+	176	1	Intergenic	novelGene_8213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATTATTATGGA	NA	False	NA	NA	False	NA	NA	NA	32197793	32197969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_32197800_32198000
m54284U_201205_001509/73271231/ccs	chr2	-	175	1	Intergenic	novelGene_1041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTAAAAAGATCTTTAC	NA	False	NA	NA	False	NA	NA	NA	122825323	122825148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_122825100_122825300
m54284U_201205_001509/73335774/ccs	chr15	+	2809	1	Intergenic	novelGene_7613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAACCATAATGATGGCA	NA	False	NA	NA	False	NA	NA	NA	6255886	6258695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_6255900_6258700
m54284U_201205_001509/7342480/ccs	chr8	+	182	1	Intergenic	novelGene_4397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTTATATGTA	NA	False	NA	NA	False	NA	NA	NA	88918710	88918892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_88918700_88918900
m54284U_201205_001509/73926067/ccs	chr11	+	2296	12	NIC	ENSMUSG00000020476.15	novel	2001	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	305	junction_7	39.1924684955778	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTCAGCCCATCCAT	NA	False	NA	-29	True	NA	NA	NA	5738487	5750629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5748112_5748215_5748326_5749233_5749340_5749859
m54284U_201205_001509/74056412/ccs	chr7	-	4300	9	NIC	ENSMUSG00000030894.6	novel	3687	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	275	junction_8	24.3977457975117	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGAGTGATTTTTTTT	NA	False	NA	4	True	AATAAA	-30	NA	105401442	105395125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105401261_105401377
m54284U_201205_001509/74123860/ccs	chr13	-	166	1	Intergenic	novelGene_7033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAATTTAATTT	NA	False	NA	NA	False	NA	NA	NA	41488927	41488761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_41488800_41488900
m54284U_201205_001509/74189109/ccs	chr4	+	800	1	Genic_Genomic	ENSMUSG00000084910.2	novel	NA	NA	NA	NA	-52	-13257	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTGACCCGCCGGATT	NA	False	NA	NA	False	AATAAA	-19	NA	72119532	72120332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_+_72119500_72120300
m54284U_201205_001509/74320030/ccs	chr14	-	167	1	Intergenic	novelGene_7355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAATCAAAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	24299928	24299761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_24299800_24299900
m54284U_201205_001509/74384157/ccs	chr5	-	183	1	Intergenic	novelGene_2598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATAATTCATG	NA	False	NA	NA	False	NA	NA	NA	66388860	66388677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_66388700_66388900
m54284U_201205_001509/74448920/ccs	chr2	-	168	1	Intergenic	novelGene_1277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTTTTTTAAACATA	NA	False	NA	NA	False	NA	NA	NA	169118440	169118272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_169118300_169118400
m54284U_201205_001509/74450736/ccs	chr7	+	1831	9	NNC	ENSMUSG00000003421.14	novel	1814	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	206.05217785794	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	3058	False	NA	25	True	NA	NA	NA	44711852	44727634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_44711956_44722917_44722989_44723405_44723512_44724029_44724106_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
m54284U_201205_001509/74451595/ccs	chr9	-	1552	1	Intergenic	novelGene_4629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGGTCATGGTGT	NA	False	NA	NA	False	NA	NA	NA	10321802	10320250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_10320200_10321800
m54284U_201205_001509/74645520/ccs	chr5	-	178	1	Intergenic	novelGene_2782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGACATATTTACACTG	NA	False	NA	NA	False	NA	NA	NA	114026023	114025845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_114025800_114026000
m54284U_201205_001509/74712694/ccs	chr7	-	5798	14	NIC	ENSMUSG00000070808.5	novel	5975	15	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	2	10	junction_3	4.77419096897935	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGGCCCCCTCTGGCCC	NA	False	NA	NA	False	ATTAAA	-27	NA	15781846	15704596	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_15706815_15709007_15709111_15709290_15709386_15709589_15709739_15710975_15711038_15712613_15712724_15712939_15713121_15713275_15713912_15721403_15723366_15727004_15727071_15730325_15730369_15730475_15730522_15733318_15733420_15781820
m54284U_201205_001509/7472716/ccs	chr4	-	191	1	Intergenic	novelGene_2444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTGTGTCTTTTTA	NA	False	NA	NA	False	NA	NA	NA	156374392	156374201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_156374200_156374400
m54284U_201205_001509/74843140/ccs	chr2	+	181	1	Intergenic	novelGene_1105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCATCTTTTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	146851380	146851561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_146851400_146851600
m54284U_201205_001509/74909181/ccs	chr12	+	1301	8	NIC	ENSMUSG00000021037.8	novel	1377	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	208	junction_2	974.232843140212	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTGACAGCCTTGTG	NA	False	NA	17	True	AGTAAA	-35	NA	87313483	87320772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_87313696_87314928_87315120_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
m54284U_201205_001509/74909822/ccs	chr11	-	190	1	Intergenic	novelGene_5763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACATGGCACTCTAAG	1038	False	NA	NA	False	NA	NA	NA	30748056	30747866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_30747900_30748100
m54284U_201205_001509/74910096/ccs	chr14	-	177	1	Intergenic	novelGene_7353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATGAAGAC	9971	False	NA	NA	False	NA	NA	NA	21838876	21838699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_21838700_21838900
m54284U_201205_001509/75105326/ccs	chr2	-	181	1	Intergenic	novelGene_821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAGAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	66620948	66620767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_66620800_66620900
m54284U_201205_001509/75107108/ccs	chr11	-	2394	5	NIC	ENSMUSG00000034201.14	novel	2847	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	65.3241915372858	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGGATTCTAGAGTTAA	NA	False	NA	17	True	NA	NA	NA	5015327	5010469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_5011818_5012154_5012327_5012593_5012702_5013825_5014479_5015214
m54284U_201205_001509/75300988/ccs	chr2	+	2687	4	NNC	ENSMUSG00000062175.14	novel	2900	3	NA	NA	282	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	82.8908251188809	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTTTTTGTTGTTTCT	NA	False	NA	NA	False	AATAAA	-35	NA	156682301	156697490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_156682438_156686075_156686302_156695048_156695149_156695265
m54284U_201205_001509/75367261/ccs	chr9	-	3337	1	Antisense	novelGene_ENSMUSG00000034593.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATTAAAA	9679	False	NA	NA	False	NA	NA	NA	75062820	75059483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_75059500_75062800
m54284U_201205_001509/75367687/ccs	chr4	+	177	1	Intergenic	novelGene_1810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTCTTTTTTAATCC	NA	False	NA	NA	False	NA	NA	NA	40907804	40907981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_40907800_40908000
m54284U_201205_001509/75628745/ccs	chr3	+	175	1	FSM	ENSMUSG00002076132.1	ENSMUST00020183798.1	117	1	107	-165	107	165	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGACTGCCTG	NA	False	NA	NA	False	NA	NA	NA	51736439	51736614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_51736400_51736600
m54284U_201205_001509/75694788/ccs	chr2	+	3714	12	NIC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	0	-393	intron_retention	FALSE	canonical	3	563	junction_10	67.5068407920191	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587933	164610134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164609683_164609782
m54284U_201205_001509/75762241/ccs	chr17	-	4178	5	NIC	ENSMUSG00000048027.10	novel	701	4	NA	NA	69	-179	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	24.6272207120495	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGATGTTTGTTCTCTG	NA	False	NA	-6	True	AATAAA	-16	NA	16051078	16024929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_16028064_16040931_16041441_16046273_16046537_16049881_16049958_16050882
m54284U_201205_001509/75827350/ccs	chr9	-	3087	6	NNC	ENSMUSG00000040722.8	novel	3225	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	58.262852659306	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCCTCTGTGTTACTTGT	NA	False	NA	0	True	AATAAA	-20	NA	57375343	57348609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_57351148_57352654_57352790_57353354_57353457_57358638_57358768_57359262_57359318_57375215
m54284U_201205_001509/75890948/ccs	chrX	+	191	1	Intergenic	novelGene_9675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTGGCTGTGCAACCA	NA	False	NA	NA	False	NA	NA	NA	151064310	151064501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_151064300_151064500
m54284U_201205_001509/76152988/ccs	chr5	-	198	1	Intergenic	novelGene_3050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAAAATTTTTTTTAA	2858	False	NA	NA	False	NA	NA	NA	143906953	143906755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_143906800_143907000
m54284U_201205_001509/76219495/ccs	chr19	+	996	2	NNC	ENSMUSG00000024983.11	novel	1244	8	NA	NA	0	-14082	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGTTTTCTTGTTAA	NA	False	NA	NA	False	ATTAAA	-14	NA	55304726	55306988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_55304977_55306242
m54284U_201205_001509/76220255/ccs	chr10	-	1799	9	NNC	ENSMUSG00000035890.10	novel	1639	9	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_3	333.351822403898	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCCCATGGCTTGGCGTC	NA	False	NA	-7	True	AATACA	-16	NA	79602744	79594375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_79595071_79596624_79596741_79596822_79597146_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
m54284U_201205_001509/76351370/ccs	chr4	-	1637	3	NNC	ENSMUSG00000028675.13	novel	1919	3	NA	NA	0	-278	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	180.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCCAAAGACTCATTTT	NA	False	NA	NA	False	TATAAA	-33	NA	135601161	135598506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_135599766_135600205_135600407_135600984
m54284U_201205_001509/76481535/ccs	chrX	-	3392	1	Intergenic	novelGene_9585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAAATCTTACCTGAA	8537	False	NA	NA	False	NA	NA	NA	102496865	102493473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_102493500_102496900
m54284U_201205_001509/76482093/ccs	chr1	-	188	1	Intergenic	novelGene_375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATCTTTAAAAAAATTTT	NA	False	NA	NA	False	NA	NA	NA	151476714	151476526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_151476500_151476700
m54284U_201205_001509/76482886/ccs	chr5	+	182	1	Intergenic	novelGene_2993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAACACCCATACATAC	2759	False	NA	NA	False	NA	NA	NA	136922367	136922549	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_136922400_136922500
m54284U_201205_001509/76611649/ccs	chr7	+	180	1	Intergenic	novelGene_4025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATCTGTCCAGCTC	NA	False	NA	NA	False	AATAAA	-6	NA	110193475	110193655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_110193500_110193700
m54284U_201205_001509/76613752/ccs	chr7	-	3989	24	NNC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_4	298.613133339186	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	9414	False	NA	0	True	NA	NA	NA	126102609	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126091388_126091620_126091781_126091983_126092174_126092335_126092543_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201205_001509/76677279/ccs	chr17	-	4223	34	NNC	ENSMUSG00000024242.16	novel	4220	34	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_5	79.0216694484762	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCGTAGTTGCTGG	NA	False	NA	-4	True	AATAAA	-15	NA	81035522	80887945	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80902284_80902375_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922582_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
m54284U_201205_001509/76745354/ccs	chr10	-	203	1	Intergenic	novelGene_5374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAGGTAAGCCCGGTTT	NA	False	NA	NA	False	NA	NA	NA	67122011	67121808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_67121800_67122000
m54284U_201205_001509/76809064/ccs	chr1	-	655	1	Intergenic	novelGene_176	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-5	NA	72417052	72416397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_72416400_72417100
m54284U_201205_001509/76939737/ccs	chr15	-	182	1	Intergenic	novelGene_7652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTACATAAATGAAATTG	NA	False	NA	NA	False	NA	NA	NA	22101321	22101139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_22101100_22101300
m54284U_201205_001509/77007582/ccs	chr12	-	162	1	Intergenic	novelGene_6568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	12839676	12839514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_12839500_12839700
m54284U_201205_001509/77071753/ccs	chr5	-	170	1	Intergenic	novelGene_2774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTTTTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112817090	112816920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_112816900_112817100
m54284U_201205_001509/77072101/ccs	chr16	-	526	1	Intergenic	novelGene_8131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	18717857	18717331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18717300_18717900
m54284U_201205_001509/77072537/ccs	chr2	-	2247	9	NIC	ENSMUSG00000026791.15	novel	2108	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	167	junction_4	8.8175960442742	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTTCAGTGGAGCCAGA	3964	False	NA	-13	True	AATAAA	-15	NA	32872080	32863001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871896_32871969
m54284U_201205_001509/77138219/ccs	chr10	+	170	1	Intergenic	novelGene_5550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGCAGGGCT	NA	False	NA	NA	False	NA	NA	NA	116895247	116895417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_116895200_116895400
m54284U_201205_001509/77269396/ccs	chr1	-	2279	6	NNC	ENSMUSG00000026095.16	novel	2442	6	NA	NA	85	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	231.068820917059	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGGGTGTAGTAGTT	NA	False	NA	-30	True	AATAAA	-13	NA	53391826	53383803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_53384089_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
m54284U_201205_001509/77335254/ccs	chr2	+	189	1	Intergenic	novelGene_1142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAAAATGGTTCTTATTT	NA	False	NA	NA	False	NA	NA	NA	154292736	154292925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154292700_154292900
m54284U_201205_001509/77399270/ccs	chr10	+	2207	8	NIC	ENSMUSG00000112241.2	novel	512	6	NA	NA	28	4450	combination_of_known_splicesites	FALSE	canonical	2	8	junction_3	535.279480691143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTGTGTGGTGCTCA	NA	False	NA	5	True	AATAAA	-18	NA	77442058	77481827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_77442176_77445645_77445775_77449813_77449886_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
m54284U_201205_001509/77400733/ccs	chr1	+	282	6	NIC	ENSMUSG00000053332.14	novel	346	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	36	junction_4	2195.84234406753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAAGTGTGCATTTTGT	NA	False	NA	22	True	ATTAAA	-18	NA	160862735	160866109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160865794_160865843_160866026
m54284U_201205_001509/77531902/ccs	chr2	+	183	1	Intergenic	novelGene_717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTTTTAAGTTCATAA	NA	False	NA	NA	False	NA	NA	NA	32352505	32352688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_32352500_32352700
m54284U_201205_001509/77661872/ccs	chr17	-	881	1	Intergenic	novelGene_8473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGCCCACTGAACCCA	5367	False	NA	NA	False	NA	NA	NA	29178652	29177771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29177800_29178700
m54284U_201205_001509/77792826/ccs	chr10	+	196	1	Intergenic	novelGene_5644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAGAACATACAAATCC	NA	False	NA	NA	False	NA	NA	NA	130283389	130283585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_130283400_130283600
m54284U_201205_001509/77793687/ccs	chr8	+	187	1	Intergenic	novelGene_4235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACACCTATCAGGAAGC	NA	False	NA	NA	False	NA	NA	NA	25705883	25706070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_25705900_25706100
m54284U_201205_001509/77857068/ccs	chr7	+	4615	14	NNC	ENSMUSG00000030987.6	novel	4085	12	NA	NA	-541	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	15.7585329566792	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTGTGACTCTTATT	NA	False	NA	23	True	AATAAA	-23	NA	101916471	102086525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_101917479_101917582_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102077980_102078074_102080091_102080159_102084590
m54284U_201205_001509/77859590/ccs	chr2	-	3768	17	NIC	ENSMUSG00000006800.15	novel	4580	21	NA	NA	-58	-3118	combination_of_known_junctions	FALSE	canonical	3	105	junction_16	191.93516971884	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGACCCAGTGGGCAGC	NA	False	NA	NA	False	AATAAA	-24	NA	165996784	165919852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996597
m54284U_201205_001509/77922759/ccs	chr8	+	3008	5	NIC	ENSMUSG00000066880.16	novel	769	4	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	26.7348087705897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	False	NA	29	True	AATAAA	-17	NA	72662500	72688473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_72662583_72666965_72667093_72682045_72682173_72682981_72683043_72685862
m54284U_201205_001509/77923274/ccs	chr1	-	187	1	Intergenic	novelGene_170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAACATGAGGGATAAAAG	NA	False	NA	NA	False	NA	NA	NA	71228134	71227947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_71227900_71228100
m54284U_201205_001509/7798819/ccs	chr10	+	938	6	NIC	ENSMUSG00000075706.12	novel	959	7	NA	NA	144	0	intron_retention	FALSE	canonical	3	7423	junction_4	812.745815123031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	799	False	NA	4	True	AATAAA	-14	NA	79889465	79892273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79889550_79890347_79890443_79890533_79890954_79891756_79891782_79891873_79891934_79892019
m54284U_201205_001509/7801061/ccs	chr4	+	164	1	Intergenic	novelGene_1980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGTAAATTTCCC	1348	False	NA	NA	False	NA	NA	NA	107129295	107129459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_107129300_107129500
m54284U_201205_001509/78054664/ccs	chr2	+	3326	29	NIC	ENSMUSG00000027433.6	novel	3434	30	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	37	junction_12	207.575877447162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTCTGGTGTCTGA	NA	False	NA	10	True	AATAAA	-22	NA	146854915	146919920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
m54284U_201205_001509/78381509/ccs	chr19	+	196	1	Intergenic	novelGene_9283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCCCAGCCAGGCCCAAT	6357	False	NA	NA	False	NA	NA	NA	44517594	44517790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_44517600_44517800
m54284U_201205_001509/78383675/ccs	chr13	-	169	1	Intergenic	novelGene_7130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAGAATCACTC	NA	False	NA	NA	False	NA	NA	NA	59086274	59086105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_59086100_59086300
m54284U_201205_001509/78579710/ccs	chr10	+	211	1	Intergenic	novelGene_5275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAAGAGGAGGTGGAAG	NA	False	NA	NA	False	NA	NA	NA	40841141	40841352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_40841100_40841400
m54284U_201205_001509/78580170/ccs	chr7	-	185	1	Intergenic	novelGene_3834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATCTTTTTAAAACCA	NA	False	NA	NA	False	NA	NA	NA	44802644	44802459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_44802500_44802600
m54284U_201205_001509/7866765/ccs	chr4	+	202	1	Intergenic	novelGene_2051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCCAGAAGCCCTGTG	NA	False	NA	NA	False	NA	NA	NA	118025321	118025523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_118025300_118025500
m54284U_201205_001509/786850/ccs	chr11	-	4101	1	Intergenic	novelGene_5758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACAACTCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	29665955	29661854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_29661900_29666000
m54284U_201205_001509/78710876/ccs	chr17	+	178	1	Intergenic	novelGene_8530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGAGTTGCCTTG	NA	False	NA	NA	False	NA	NA	NA	33169511	33169689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_33169500_33169700
m54284U_201205_001509/78842647/ccs	chr1	-	197	1	Intergenic	novelGene_252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTCACAACCACCTGTA	NA	False	NA	NA	False	NA	NA	NA	93451913	93451716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_93451700_93451900
m54284U_201205_001509/789166/ccs	chr1	-	2260	1	NIC	ENSMUSG00000026566.16	novel	2285	6	NA	NA	0	-23832	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAACATTTTCAGTGGA	NA	False	NA	NA	False	NA	NA	NA	165462098	165459838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_165459800_165462100
m54284U_201205_001509/789183/ccs	chr15	-	222	1	Intergenic	novelGene_8008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCTAAACTGAACTTCC	NA	False	NA	NA	False	TTTAAA	-12	NA	102328668	102328446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102328400_102328700
m54284U_201205_001509/79039139/ccs	chr17	-	192	1	Intergenic	novelGene_8489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGCCCACTCTTGTGAG	NA	False	NA	NA	False	NA	NA	NA	29499868	29499676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29499700_29499900
m54284U_201205_001509/79103008/ccs	chr2	-	2029	7	NIC	ENSMUSG00000002109.15	novel	2228	9	NA	NA	0	0	intron_retention	FALSE	canonical	1	4	junction_3	44.2555708985384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAAAAACCCAAAAGCCC	3019	False	NA	-42	True	AATAAA	-19	NA	91067305	91041932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_91042358_91042624_91042671_91042794_91042960_91047397_91047576_91047651_91047752_91064452_91065297_91067034
m54284U_201205_001509/79365001/ccs	chr8	+	3592	15	NIC	ENSMUSG00000001909.17	novel	2567	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	129	junction_1	117.756082212169	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCTGCATGGGGGAC	NA	False	NA	36	True	AATAAA	-36	NA	85415917	85426437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85416006_85416336_85416538_85417145_85417577_85417880_85418069_85421850_85421967_85422056_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
m54284U_201205_001509/79365253/ccs	chr2	+	182	1	Intergenic	novelGene_1120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTAAAAAAGTAAATAA	2039	False	NA	NA	False	NA	NA	NA	152097132	152097314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_152097100_152097300
m54284U_201205_001509/79431723/ccs	chr8	-	149	1	Intergenic	novelGene_4615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATCAAATAAAAGTTACC	NA	False	NA	NA	False	NA	NA	NA	127759521	127759372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_127759400_127759500
m54284U_201205_001509/79496421/ccs	chr12	+	4385	21	NIC	ENSMUSG00000021111.16	novel	4380	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	122	junction_14	451.400407066719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATAGTTGGCTGGTTTC	NA	False	NA	12	True	AATAAA	-18	NA	105750974	105805203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
m54284U_201205_001509/79692916/ccs	chr11	+	3941	19	NIC	ENSMUSG00000041164.16	novel	4199	20	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_8	96.3757435801005	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTGAGTCCTTCCTTTG	4913	False	NA	20	True	ATTAAA	-20	NA	6339363	6356074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_6339514_6345124_6345289_6345567_6345679_6345757_6345873_6346327_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
m54284U_201205_001509/79824294/ccs	chr4	-	184	1	Intergenic	novelGene_2056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAAAAAGAAAGCAGCCT	8200	False	NA	NA	False	NA	NA	NA	118449312	118449128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_118449100_118449300
m54284U_201205_001509/79889658/ccs	chr1	+	190	1	Intergenic	novelGene_280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACAAGCTGCTGTAGCCA	NA	False	NA	NA	False	NA	NA	NA	119738261	119738451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_119738300_119738500
m54284U_201205_001509/79955589/ccs	chr19	-	177	1	Intergenic	novelGene_9189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGCAAGCGGGGCC	1440	False	NA	NA	False	NA	NA	NA	24517301	24517124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_24517100_24517300
m54284U_201205_001509/7996112/ccs	chr4	+	182	1	Intergenic	novelGene_2302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGTTTTCTGATGAA	NA	False	NA	1	True	NA	NA	NA	141025787	141025969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141025800_141026000
m54284U_201205_001509/80283410/ccs	chr4	-	230	1	Intergenic	novelGene_1753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTAATACAAAAAGTGAAA	NA	False	NA	NA	False	AATAAA	-31	NA	11636400	11636170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11636200_11636400
m54284U_201205_001509/80544416/ccs	chr7	+	2771	1	Intergenic	novelGene_3804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACCAAAACCAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	41198953	41201724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_41199000_41201700
m54284U_201205_001509/80546038/ccs	chr1	-	1813	3	NIC	ENSMUSG00000026279.15	novel	2096	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTGTAGACTGTACAT	NA	False	NA	-1	True	AATAAA	-38	NA	93682586	93633111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_93633378_93677568_93678708_93682178
m54284U_201205_001509/80677296/ccs	chr9	+	162	1	Intergenic	novelGene_4658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAAAGACAACTA	4405	False	NA	NA	False	NA	NA	NA	21135915	21136077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_21135900_21136100
m54284U_201205_001509/80741756/ccs	chr3	-	5819	1	NIC	ENSMUSG00000027506.16	novel	6317	6	NA	NA	26837	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAGGTTTCAATATTTA	4289	False	NA	-28	True	AATAAA	-15	NA	9000476	8994657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_8994700_9000500
m54284U_201205_001509/80807124/ccs	chr11	-	2325	1	FSM	ENSMUSG00000099681.2	ENSMUST00000190120.2	3708	1	89	1294	89	-1294	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGCTTTATGTCTTTTTT	NA	False	NA	NA	False	TATAAA	-1	NA	105072170	105069845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_105069800_105072200
m54284U_201205_001509/80873343/ccs	chr10	+	3713	1	ISM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	12239	0	10557	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGCCTGGTCTCTGT	NA	False	NA	22	True	CATAAA	-38	NA	80984343	80988056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_+_80984300_80988100
m54284U_201205_001509/81069912/ccs	chr4	-	155	1	Intergenic	novelGene_2002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTTTAAAAGTGGGGAAG	NA	False	NA	NA	False	NA	NA	NA	108697114	108696959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108697000_108697100
m54284U_201205_001509/81133897/ccs	chr8	+	811	1	FSM	ENSMUSG00000061104.6	ENSMUST00000074053.6	789	1	0	-22	0	22	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGTGTCACAAAGAAT	NA	False	NA	NA	False	AATACA	-35	NA	96551973	96552784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_96552000_96552800
m54284U_201205_001509/81200809/ccs	chr2	+	180	1	Intergenic	novelGene_1262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTTTAAAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	168474383	168474563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_168474400_168474600
m54284U_201205_001509/8129109/ccs	chr7	-	224	1	Intergenic	novelGene_4035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGTCTTCCAGGTTTG	NA	False	NA	NA	False	NA	NA	NA	113804450	113804226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_113804200_113804400
m54284U_201205_001509/81398586/ccs	chr7	-	1588	10	NNC	ENSMUSG00000002984.18	novel	1577	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_9	883.01404432157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGAGGCCTCGGTTTTC	9881	False	NA	-13	True	NA	NA	NA	19449363	19435237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449271
m54284U_201205_001509/81462035/ccs	chr7	-	3186	9	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	640	junction_5	113.634213047832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3784	False	NA	-14	True	AATAAA	-16	NA	30349569	30340425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30347060_30347155_30347241_30349008_30349145_30349362
m54284U_201205_001509/81528308/ccs	chr7	+	4390	6	NIC	ENSMUSG00000063229.16	novel	1277	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	6684	junction_1	728.350300336315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCTGCTCTTTTATTAA	NA	False	NA	19	True	AATAAA	-15	NA	46495266	46505051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46503531_46504400
m54284U_201205_001509/81529558/ccs	chr11	+	175	1	Intergenic	novelGene_6042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	77246441	77246616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77246400_77246600
m54284U_201205_001509/81594552/ccs	chr3	-	2766	13	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	228.537196097266	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157737403	157716555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724723_157724836_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
m54284U_201205_001509/81594910/ccs	chr4	-	1491	1	FSM	ENSMUSG00000088504.4	ENSMUST00000157879.4	140	1	-633	-718	-633	718	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGACCTCCTCCTAGC	NA	False	NA	NA	False	NA	NA	NA	89101990	89100499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_89100500_89102000
m54284U_201205_001509/81723882/ccs	chr18	-	188	1	Intergenic	novelGene_8907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGACTCTGCACAGCTT	NA	False	NA	NA	False	NA	NA	NA	36084828	36084640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36084600_36084800
m54284U_201205_001509/81791035/ccs	chr13	-	218	1	Intergenic	novelGene_7031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTGTACAAAAAGCA	NA	False	NA	NA	False	NA	NA	NA	41152165	41151947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_41151900_41152200
m54284U_201205_001509/8193999/ccs	chr13	-	175	1	Intergenic	novelGene_7305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAGTTGAACA	NA	False	NA	NA	False	NA	NA	NA	111840659	111840484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_111840500_111840700
m54284U_201205_001509/8194876/ccs	chr13	+	176	1	Intergenic	novelGene_7156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATGCCTCCAGAAT	NA	False	NA	NA	False	NA	NA	NA	63763055	63763231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_63763100_63763200
m54284U_201205_001509/82052677/ccs	chr3	+	2725	15	NIC	ENSMUSG00000027722.15	novel	2890	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	18	junction_14	132.475970096698	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTTTATCTTGTGCTT	NA	False	NA	11	True	AATAAA	-20	NA	37474446	37633245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37632900
m54284U_201205_001509/82053560/ccs	chr11	-	3814	1	NIC	ENSMUSG00000017615.13	novel	3720	7	NA	NA	8151	-1457	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACTGACCAGCTTTGGC	3285	False	NA	NA	False	NA	NA	NA	78418946	78415132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_78415100_78418900
m54284U_201205_001509/82118962/ccs	chr2	+	206	1	ISM	ENSMUSG00000027012.16	ENSMUST00000149735.2	2248	4	18115	217	-4680	-217	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATGAGGGGTGG	4689	False	NA	NA	False	AATAAA	-2	NA	71060462	71060668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_71060500_71060700
m54284U_201205_001509/82119285/ccs	chr1	+	304	1	Intergenic	novelGene_306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTCCAGCTTAAGGGG	2775	False	NA	NA	False	NA	NA	NA	131841577	131841881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_131841600_131841900
m54284U_201205_001509/82182202/ccs	chr11	-	476	1	FSM	ENSMUSG00000083061.2	ENSMUST00000118307.2	348	1	-70	-58	-70	58	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATTAAGACCTTAAAAAA	NA	False	NA	NA	False	AATAAA	-35	NA	49569954	49569478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_49569500_49570000
m54284U_201205_001509/82182498/ccs	chr17	+	1128	1	Antisense	novelGene_ENSMUSG00000039615.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTGGAAGTCCACAGT	NA	False	NA	NA	False	AATAAA	-18	NA	26052108	26053236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_26052100_26053200
m54284U_201205_001509/82315427/ccs	chr9	-	198	1	Intergenic	novelGene_4692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTTTAATCCCAGCACT	6007	False	NA	NA	False	TATAAA	-5	NA	31125819	31125621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_31125600_31125800
m54284U_201205_001509/82381194/ccs	chr17	+	2778	1	Antisense	novelGene_ENSMUSG00000024222.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGGCTGTTGCGGTAAA	6906	False	NA	NA	False	ATTAAA	-19	NA	28634372	28637150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_28634400_28637200
m54284U_201205_001509/82575819/ccs	chr14	-	177	1	Intergenic	novelGene_7476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAGAAAAACTGTCCCA	NA	False	NA	NA	False	NA	NA	NA	56200447	56200270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_56200300_56200400
m54284U_201205_001509/82838033/ccs	chr7	+	5617	1	ISM	ENSMUSG00000029461.18	ENSMUST00000049053.9	6609	9	129338	0	49665	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAACGTGTGTCTTGGGT	NA	False	NA	NA	False	ATTAAA	-40	NA	100485246	100490863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_100485200_100490900
m54284U_201205_001509/82970640/ccs	chr12	-	187	1	Intergenic	novelGene_6875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTTTATCTCAAACAAAG	7221	False	NA	NA	False	NA	NA	NA	105639517	105639330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_105639300_105639500
m54284U_201205_001509/83034841/ccs	chr1	-	2638	10	NIC	ENSMUSG00000025935.11	novel	2938	11	NA	NA	61	-82	combination_of_known_junctions	FALSE	canonical	3	6	junction_8	416.09988117171	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGTTTCCTGAACAAT	9752	False	NA	-7	True	AATAAA	-16	NA	13660038	13635003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13651246_13651311_13659823
m54284U_201205_001509/83101191/ccs	chr9	+	5145	1	FSM	ENSMUSG00000119388.1	ENSMUST00000083895.3	99	1	-2048	-2998	-2048	2998	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTGTGACTCTTAAAT	NA	False	NA	38	True	AATAAA	-20	NA	64080656	64085801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_+_64080700_64085800
m54284U_201205_001509/83165230/ccs	chr4	-	2662	5	NIC	ENSMUSG00000078495.11	novel	2729	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_3	87.6880122935855	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTGGTTGTTTTCA	9523	False	NA	NA	False	NA	NA	NA	147894245	147838430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_147840693_147842158_147842286_147845677_147845736_147891546_147891641_147894124
m54284U_201205_001509/8324587/ccs	chr1	-	7017	11	NIC	ENSMUSG00000054387.14	novel	7105	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_6	112.364629666101	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTTGTCATTATTGG	NA	False	NA	-5	True	ATTAAA	-15	NA	132953095	132913957	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952985
m54284U_201205_001509/83296744/ccs	chr5	+	1274	8	NNC	ENSMUSG00000034021.16	novel	7315	35	NA	NA	0	-18584	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	59.2597189135612	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGGATTAATGCTATGA	NA	False	NA	NA	False	AATAAA	-28	NA	150597291	150653494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150653071
m54284U_201205_001509/83363898/ccs	chr7	-	179	1	Intergenic	novelGene_4150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATTAAAATATATGGTT	4767	False	NA	NA	False	NA	NA	NA	139655412	139655233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_139655200_139655400
m54284U_201205_001509/83624265/ccs	chr2	+	1853	5	NNC	ENSMUSG00000026960.7	novel	2548	4	NA	NA	0	-778	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	247.51717112152	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATCAAGGGTTCTTGTT	NA	False	NA	7	True	AATATA	-19	NA	53082099	53108454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_53082535_53084295_53084350_53092930_53093064_53104463_53104547_53107306
m54284U_201205_001509/83755142/ccs	chr5	-	206	1	Antisense	novelGene_ENSMUSG00000029647.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCATACAAAAAGTACAGAC	NA	False	NA	NA	False	NA	NA	NA	147388747	147388541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_147388500_147388700
m54284U_201205_001509/84017184/ccs	chr10	+	235	1	Intergenic	novelGene_5410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTCTACAACACAAAATA	NA	False	NA	NA	False	AATAAA	-5	NA	75632178	75632413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_75632200_75632400
m54284U_201205_001509/84150056/ccs	chr10	-	171	1	Intergenic	novelGene_5179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAACAAAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	5759769	5759598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_5759600_5759800
m54284U_201205_001509/84214649/ccs	chr2	-	203	1	Intergenic	novelGene_667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTTGGCAGGATGGCT	NA	False	NA	NA	False	NA	NA	NA	29447075	29446872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29446900_29447100
m54284U_201205_001509/84216618/ccs	chr11	+	2617	1	Antisense	novelGene_ENSMUSG00000018537.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGAGACCGTCCCTGGGT	NA	False	NA	NA	False	TTTAAA	-14	NA	97590648	97593265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_97590600_97593300
m54284U_201205_001509/84281084/ccs	chr13	-	192	1	Intergenic	novelGene_7142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTCTTTATTACTTGTG	NA	False	NA	NA	False	NA	NA	NA	62575219	62575027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_62575000_62575200
m54284U_201205_001509/84411055/ccs	chr14	-	195	1	Intergenic	novelGene_7586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTAGGTGCTAGAGAG	NA	False	NA	NA	False	NA	NA	NA	102096439	102096244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_102096200_102096400
m54284U_201205_001509/84476195/ccs	chr17	+	3380	11	NNC	ENSMUSG00000019432.16	novel	1739	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	713.572168739785	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTCTGTTCATGGCTTGA	NA	False	NA	37	True	AATGAA	-26	NA	35460753	35472683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35468549_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
m54284U_201205_001509/84478479/ccs	chr12	-	178	1	Intergenic	novelGene_6843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTAAAAGTACATC	6845	False	NA	NA	False	NA	NA	NA	99413665	99413487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_99413500_99413700
m54284U_201205_001509/84478640/ccs	chr16	-	184	1	Intergenic	novelGene_8301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTCAGAATAAACATTCA	NA	False	NA	NA	False	NA	NA	NA	82023409	82023225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_82023200_82023400
m54284U_201205_001509/8454728/ccs	chr8	-	178	1	FSM	ENSMUSG00000037234.18	ENSMUST00000211777.2	1954	1	1450	326	1450	-325	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	26528619	26528441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_26528400_26528600
m54284U_201205_001509/84609301/ccs	chr12	-	180	1	Intergenic	novelGene_6845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAATCTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	99531785	99531605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_99531600_99531800
m54284U_201205_001509/84739565/ccs	chr13	-	178	1	Intergenic	novelGene_7168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATACTCACCTCAACAG	NA	False	NA	NA	False	NA	NA	NA	64479421	64479243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64479200_64479400
m54284U_201205_001509/84804636/ccs	chr4	-	1999	5	NIC	ENSMUSG00000041193.16	novel	2131	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	34.679785178112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACATGTTTTGGTGTA	NA	False	NA	-5	True	AATAAA	-24	NA	138590793	138526559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_138527973_138528662_138528770_138533495_138533546_138546310_138546427_138590480
m54284U_201205_001509/84936127/ccs	chr6	-	2915	11	NIC	ENSMUSG00000029752.13	novel	2001	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	8132	junction_6	305.289845884202	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGGTTGTGGGTAC	1567	False	NA	-9	True	AATAAA	-17	NA	7693254	7675168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_7675525_7675992_7676149_7676234_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
m54284U_201205_001509/85133116/ccs	chr12	-	181	1	Intergenic	novelGene_6945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAATAAAATAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	118639807	118639626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_118639600_118639800
m54284U_201205_001509/85329163/ccs	chr17	+	175	1	Intergenic	novelGene_8341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTGTTTTTGTTTTT	1019	False	NA	NA	False	NA	NA	NA	3327699	3327874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_3327700_3327900
m54284U_201205_001509/853784/ccs	chr18	-	2494	1	Antisense	novelGene_ENSMUSG00000024287.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGCGTTGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	9970315	9967821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_-_9967800_9970300
m54284U_201205_001509/85395512/ccs	chr1	-	8241	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-160	1529	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_16	272.833226303176	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCATTGATTCCTTGTA	7727	False	NA	15	True	ATTAAA	-44	NA	84817192	84700455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84792543_84792691_84816949
m54284U_201205_001509/854310/ccs	chr14	+	4325	40	NNC	ENSMUSG00000021843.18	novel	4436	41	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_2	171.025764041012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTCTGATTGTCGTTGA	NA	False	NA	24	True	AATAAA	-24	NA	47886772	47974021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_47886897_47901212_47901773_47904755_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47973556
m54284U_201205_001509/85461716/ccs	chr19	-	201	1	Intergenic	novelGene_9138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCTGGTGAGATGGCTC	9253	False	NA	NA	False	NA	NA	NA	7197028	7196827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7196800_7197000
m54284U_201205_001509/85721788/ccs	chr7	-	180	1	Intergenic	novelGene_3736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCGTTAGCCGGTCGT	NA	False	NA	NA	False	NA	NA	NA	28074624	28074444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28074400_28074600
m54284U_201205_001509/85722724/ccs	chr4	+	4313	18	NNC	ENSMUSG00000028614.15	novel	4584	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_11	147.584120637553	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAATCTCTGTGTGTTT	NA	False	NA	22	True	AATAAA	-33	NA	107225248	107273543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247421_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
m54284U_201205_001509/85723895/ccs	chrX	+	185	1	Intergenic	novelGene_9669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGATTTGTTTCCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	150497368	150497553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_150497400_150497600
m54284U_201205_001509/8586438/ccs	chr1	+	4033	1	Intergenic	novelGene_207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCCATAAGAATAAGAGTG	NA	False	NA	NA	False	TTTAAA	-10	NA	77414018	77418051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_77414000_77418100
m54284U_201205_001509/8587223/ccs	chr4	+	447	1	Intergenic	novelGene_2308	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTCTTCAGCTAAAAGG	4104	False	NA	97	True	AGTAAA	-6	NA	141288915	141289362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_141288900_141289400
m54284U_201205_001509/85983258/ccs	chr2	+	185	1	Intergenic	novelGene_662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	28991744	28991929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_28991700_28991900
m54284U_201205_001509/85986095/ccs	chr13	-	192	1	Intergenic	novelGene_7055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATAATAAAGAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	47561321	47561129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_47561100_47561300
m54284U_201205_001509/86049476/ccs	chr12	-	3321	1	Antisense	novelGene_ENSMUSG00000102657.2_AS_novelGene_ENSMUSG00000065757.3_AS_novelGene_ENSMUSG00000098202.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAAACTTAACTATTGT	NA	False	NA	NA	False	AATACA	-38	NA	109643425	109640104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_-_109640100_109643400
m54284U_201205_001509/86050396/ccs	chr10	+	196	1	Intergenic	novelGene_5557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCGGCTGGAGAGATGGC	NA	False	NA	NA	False	NA	NA	NA	117562586	117562782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_117562600_117562800
m54284U_201205_001509/86114686/ccs	chr8	+	195	1	Intergenic	novelGene_4446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCAGGAGCCAGGAGGT	NA	False	NA	NA	False	NA	NA	NA	106589541	106589736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106589500_106589700
m54284U_201205_001509/86181037/ccs	chr4	+	5325	22	NNC	ENSMUSG00000028580.16	novel	4017	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_11	137.291602536295	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGCTCTCACTTCT	NA	False	NA	24	True	AATACA	-18	NA	130390677	130508875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476853_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
m54284U_201205_001509/86182417/ccs	chr4	-	188	1	Intergenic	novelGene_2139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTACAGGAGCTAGAG	NA	False	NA	NA	False	NA	NA	NA	128995762	128995574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_128995600_128995800
m54284U_201205_001509/86248239/ccs	chr9	+	168	1	Intergenic	novelGene_4764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACAAAAACTAAACAAAAAG	5870	False	NA	NA	False	NA	NA	NA	51968781	51968949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_51968800_51968900
m54284U_201205_001509/8653272/ccs	chr2	-	164	1	Intergenic	novelGene_726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	32745234	32745070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32745100_32745200
m54284U_201205_001509/86638592/ccs	chr13	-	4762	1	NIC	ENSMUSG00000021520.5	novel	535	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGATTATTTGAATTCAA	7712	False	NA	-25	True	AATAAA	-18	NA	67053442	67048680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_67048700_67053400
m54284U_201205_001509/86640812/ccs	chr7	-	187	1	Intergenic	novelGene_3783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGTTATGGTGATAGA	NA	False	NA	NA	False	TTTAAA	-13	NA	30889170	30888983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_30889000_30889200
m54284U_201205_001509/86706467/ccs	chr6	+	238	1	Intergenic	novelGene_3514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAAAGAAGA	9053	False	NA	NA	False	AATAAA	-11	NA	125371012	125371250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_125371000_125371200
m54284U_201205_001509/86837232/ccs	chr4	-	214	1	Intergenic	novelGene_1976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGAAGCCTGTGACCCTG	863	False	NA	NA	False	NA	NA	NA	106737157	106736943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_106736900_106737200
m54284U_201205_001509/86901688/ccs	chr8	+	5168	27	NIC	ENSMUSG00000036270.17	novel	4780	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	268	junction_14	55.2233228320733	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTGATGTGACTA	3256	False	NA	31	True	AATAAA	-23	NA	106607512	106619857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_106607791_106611132_106611290_106611664_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
m54284U_201205_001509/87230061/ccs	chr15	+	210	1	Intergenic	novelGene_8005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGACTGTCCCCAGGT	3409	False	NA	NA	False	NA	NA	NA	102299829	102300039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_102299800_102300000
m54284U_201205_001509/87230262/ccs	chr9	+	163	1	Intergenic	novelGene_4688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGATCTTTCTCCTT	NA	False	NA	NA	False	NA	NA	NA	30886121	30886284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_30886100_30886300
m54284U_201205_001509/87425598/ccs	chr2	-	198	1	Intergenic	novelGene_712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGGGTTCGTGTGTCTA	1240	False	NA	NA	False	NA	NA	NA	32016107	32015909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32015900_32016100
m54284U_201205_001509/87556940/ccs	chr8	-	211	1	Intergenic	novelGene_4567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGACTTAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	123119817	123119606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_123119600_123119800
m54284U_201205_001509/87624064/ccs	chr13	-	126	1	Intergenic	novelGene_6990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGGGTTCATATGCTT	NA	False	NA	NA	False	NA	NA	NA	22221510	22221384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_22221400_22221500
m54284U_201205_001509/87754845/ccs	chr11	+	1645	9	NIC	ENSMUSG00000056938.17	novel	2083	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_3	47.4919401056642	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTGTCTGGGAACCCG	NA	False	NA	6	True	ATTAAA	-16	NA	102993901	103003026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102993972_102994060_102994196_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
m54284U_201205_001509/87819775/ccs	chr5	+	245	1	Intergenic	novelGene_2637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGCATAATACAGAAATC	NA	False	NA	NA	False	NA	NA	NA	77448094	77448339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_77448100_77448300
m54284U_201205_001509/88015057/ccs	chr7	-	3379	9	NIC	ENSMUSG00000036733.17	novel	1784	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	640	junction_5	140.358246996748	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGACTGGACTTAGAAA	3784	False	NA	-14	True	AATAAA	-16	NA	30349569	30340425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30349145_30349362
m54284U_201205_001509/88080565/ccs	chr1	-	174	1	Intergenic	novelGene_255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGATAGAAGAGCA	NA	False	NA	NA	False	NA	NA	NA	93755362	93755188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_93755200_93755400
m54284U_201205_001509/88409310/ccs	chr16	-	3499	22	NNC	ENSMUSG00000022843.18	novel	3511	22	NA	NA	0	0	intron_retention	FALSE	canonical	3	33	junction_15	56.1257092435832	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCTGTTGGCTCATAT	NA	False	NA	1	True	AATAAA	-39	NA	20534914	20521713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530887_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
m54284U_201205_001509/88474317/ccs	chr3	-	192	1	Intergenic	novelGene_1339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATAAGAACGGATTGAT	NA	False	NA	NA	False	NA	NA	NA	6641472	6641280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_6641300_6641500
m54284U_201205_001509/88476181/ccs	chr2	+	4162	4	Fusion	ENSMUSG00000094786.2_ENSMUSG00000078866.11	novel	794	4	NA	NA	0	2548	intron_retention	FALSE	canonical	3	106	junction_1	58.3837877040079	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTCTTGGTCATGATG	NA	False	NA	16	True	NA	NA	NA	177156525	177204104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr2_+_177156642_177198701_177198829_177199035_177199097_177200246
m54284U_201205_001509/8847839/ccs	chr6	-	171	1	Intergenic	novelGene_3341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAAGAAATGT	NA	False	NA	NA	False	NA	NA	NA	83159191	83159020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_83159000_83159200
m54284U_201205_001509/88736679/ccs	chr18	-	3732	12	NIC	ENSMUSG00000024370.18	novel	4133	16	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	426.853779133242	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAACGCCTTATT	NA	False	NA	NA	False	AATAAA	-41	NA	34784788	34764735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34776851_34776985_34777077_34777184_34779954_34780093_34784442_34784516_34784599
m54284U_201205_001509/88803974/ccs	chr19	-	181	1	Intergenic	novelGene_9212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGCAATGAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	32197447	32197266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_32197300_32197400
m54284U_201205_001509/88868154/ccs	chr8	+	286	2	Intergenic	novelGene_4608	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTCTCGACTCATT	NA	False	NA	NA	False	NA	NA	NA	126687048	126691425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_126687171_126691261
m54284U_201205_001509/88868829/ccs	chr10	+	202	1	Intergenic	novelGene_5622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACGCCGGTTTGTGGTGGC	3737	False	NA	NA	False	NA	NA	NA	128103179	128103381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128103200_128103400
m54284U_201205_001509/89197402/ccs	chr3	-	709	1	Intergenic	novelGene_1380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCAAAGCGGG	NA	False	NA	NA	False	NA	NA	NA	34708415	34707706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_34707700_34708400
m54284U_201205_001509/89262031/ccs	chr11	-	178	1	Intergenic	novelGene_6017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	75652567	75652389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75652400_75652600
m54284U_201205_001509/89262801/ccs	chr7	-	4005	11	NIC	ENSMUSG00000036989.17	novel	2841	12	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_8	16.4632925018053	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGCTAGGTTCTTGT	NA	False	NA	-2	True	AATAAA	-15	NA	105282778	105259856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_105260418_105260535_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268594_105268822_105274612_105274779_105282583
m54284U_201205_001509/89522913/ccs	chr10	-	3754	12	NIC	ENSMUSG00000020038.11	novel	3026	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_9	74.9087599286598	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGTACTTGTGTTCAT	NA	False	NA	-5	True	ATTAAA	-19	NA	85020928	84967563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987091_84987220_84992949_84993059_85020177
m54284U_201205_001509/89524084/ccs	chr18	-	178	1	Intergenic	novelGene_8974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGTTAGGAGGCTAG	4499	False	NA	NA	False	NA	NA	NA	61311447	61311269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_61311300_61311400
m54284U_201205_001509/89654111/ccs	chr16	-	318	1	Intergenic	novelGene_8230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGATATCTTCTT	NA	False	NA	NA	False	NA	NA	NA	33618346	33618028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_33618000_33618300
m54284U_201205_001509/89784367/ccs	chr2	-	200	1	Intergenic	novelGene_986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCATTGTCCTCCCTTGCC	NA	False	NA	NA	False	NA	NA	NA	112278532	112278332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_112278300_112278500
m54284U_201205_001509/89784582/ccs	chr2	-	191	1	Intergenic	novelGene_694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	637	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTCTTACCCACTGAGCC	764	False	NA	NA	False	NA	NA	NA	31036024	31035833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31035800_31036000
m54284U_201205_001509/89787088/ccs	chr13	+	198	1	Intergenic	novelGene_7150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGACCATGTAGAGACTA	NA	False	NA	NA	False	NA	NA	NA	62944828	62945026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62944800_62945000
m54284U_201205_001509/89851237/ccs	chr5	-	189	1	Intergenic	novelGene_3029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACCAGCTCCCATGGA	NA	False	NA	NA	False	NA	NA	NA	142438266	142438077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142438100_142438300
m54284U_201205_001509/89917508/ccs	chr2	-	1706	14	NNC	ENSMUSG00000026761.13	novel	4066	14	NA	NA	0	143	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_9	128.899759227836	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTATGTGGTCCATTA	NA	False	NA	-6	True	CATAAA	-19	NA	48839288	48795184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823167_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
m54284U_201205_001509/90047409/ccs	chr1	-	172	1	Intergenic	novelGene_372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGGCGGTGGTGGTGCA	NA	False	NA	NA	False	NA	NA	NA	151402311	151402139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_151402100_151402300
m54284U_201205_001509/90243075/ccs	chr7	-	173	1	Intergenic	novelGene_3880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATAATGTTGCGCT	2218	False	NA	NA	False	NA	NA	NA	65525568	65525395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_65525400_65525600
m54284U_201205_001509/90244805/ccs	chr12	-	2753	1	NIC	ENSMUSG00000002996.18	novel	3142	11	NA	NA	5573	-224	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGGAAAAAAAAGG	NA	False	NA	-30	True	NA	NA	NA	31979229	31976476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_31976500_31979200
m54284U_201205_001509/90311326/ccs	chr7	+	2754	1	NIC	ENSMUSG00000053714.9	novel	1887	7	NA	NA	135736	-32514	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAAGAAAGAAATT	9131	False	NA	NA	False	NA	NA	NA	25230574	25233328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_25230600_25233300
m54284U_201205_001509/90376488/ccs	chr2	-	225	1	Intergenic	novelGene_1312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCTGTGGCTGAGACA	63	False	NA	NA	False	NA	NA	NA	179806628	179806403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_179806400_179806600
m54284U_201205_001509/90440121/ccs	chr12	+	5232	12	NIC	ENSMUSG00000021192.17	novel	3390	13	NA	NA	85	0	intron_retention	FALSE	canonical	3	120	junction_3	16.6787834742771	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGTGCTTTATATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	102435535	102464166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
m54284U_201205_001509/90440623/ccs	chr5	-	332	1	Intergenic	novelGene_2977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGTTTAATTTGGTTC	784	False	NA	NA	False	NA	NA	NA	135434357	135434025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135434000_135434400
m54284U_201205_001509/90441804/ccs	chrX	+	174	1	Intergenic	novelGene_9394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	9989	False	NA	NA	False	NA	NA	NA	13082805	13082979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_13082800_13083000
m54284U_201205_001509/9044732/ccs	chr16	+	178	1	Intergenic	novelGene_8246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGCTGGTGAGATGGCT	4519	False	NA	NA	False	NA	NA	NA	35876142	35876320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_35876100_35876300
m54284U_201205_001509/9046248/ccs	chr3	+	209	1	Intergenic	novelGene_1717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTAAGGCAAATTTCT	2027	False	NA	NA	False	NA	NA	NA	146152297	146152506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_146152300_146152500
m54284U_201205_001509/9046524/ccs	chr2	+	231	1	Intergenic	novelGene_786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTATATTTTAGGGCTGGA	NA	False	NA	NA	False	AATAAA	-39	NA	45026132	45026363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_45026100_45026400
m54284U_201205_001509/90506332/ccs	chr17	+	4042	8	NIC	ENSMUSG00000024158.18	novel	1191	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	330	junction_5	26.7154316026203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCTCTGCTTATGGACT	NA	False	NA	7	True	AAAAAG	-20	NA	25069549	25083420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_25069643_25071704_25071881_25072605_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
m54284U_201205_001509/90506734/ccs	chr2	-	215	1	Intergenic	novelGene_1050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCCAGCACGTCTGAGG	NA	False	NA	NA	False	NA	NA	NA	126565444	126565229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_126565200_126565400
m54284U_201205_001509/90507239/ccs	chr18	-	160	1	Intergenic	novelGene_8905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	9229	False	NA	NA	False	NA	NA	NA	36059387	36059227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36059200_36059400
m54284U_201205_001509/90704430/ccs	chr1	+	1507	13	NIC	ENSMUSG00000033021.17	novel	1539	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	77.4526288916149	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGACTCCTACTTGCGC	NA	False	NA	18	True	AATAAA	-22	NA	75412604	75419823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_+_75412656_75413427_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
m54284U_201205_001509/90767710/ccs	chr2	-	2359	1	NIC	ENSMUSG00000027122.16	novel	3337	5	NA	NA	0	-4631	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATACCTGACTGTGCA	NA	False	NA	NA	False	NA	NA	NA	106804742	106802383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_106802400_106804700
m54284U_201205_001509/90768902/ccs	chr2	-	3746	12	NNC	ENSMUSG00000068742.12	novel	3976	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_5	27.7646543839078	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGTGTAATCTATCT	NA	False	NA	NA	False	AGTAAA	-2	NA	92264381	92233990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92244203_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
m54284U_201205_001509/90833740/ccs	chr13	+	200	1	Intergenic	novelGene_6961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGCTTGTCAGGAAACA	NA	False	NA	NA	False	NA	NA	NA	9303898	9304098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_9303900_9304100
m54284U_201205_001509/90899966/ccs	chr11	+	184	1	Intergenic	novelGene_5820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGCGGACAGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	52179536	52179720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_52179500_52179700
m54284U_201205_001509/90963997/ccs	chr6	-	190	1	Intergenic	novelGene_3183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCATGCCTTGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	37556419	37556229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_37556200_37556400
m54284U_201205_001509/91029658/ccs	chr8	+	4299	1	Intergenic	novelGene_4221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAAAAAACCGA	5848	False	NA	NA	False	AATGAA	-4	NA	21090248	21094547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_21090200_21094500
m54284U_201205_001509/9111267/ccs	chr17	+	171	1	Intergenic	novelGene_8621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGGAAAAAAAGAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	47102581	47102752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47102600_47102800
m54284U_201205_001509/91423386/ccs	chr11	+	2225	5	NNC	ENSMUSG00000018666.14	novel	2377	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	303.648233981362	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGATTTCTGTCTTTTT	NA	False	NA	15	True	AATAAA	-16	NA	96679962	96698975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_96680180_96691596_96691774_96692254_96692433_96693529_96693649_96697441
m54284U_201205_001509/91423671/ccs	chr5	-	195	1	Intergenic	novelGene_2560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGAGCTTTCATAATC	2092	False	NA	NA	False	NA	NA	NA	36746574	36746379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_36746400_36746600
m54284U_201205_001509/91423982/ccs	chr11	-	1660	8	NNC	ENSMUSG00000020844.7	novel	2755	8	NA	NA	111691	-760	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_7	33.6961210145704	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTACTGTGTGCTTAGTT	1419	False	NA	-5	True	NA	NA	NA	76178203	76148783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76178098
m54284U_201205_001509/91425194/ccs	chr5	-	182	1	Intergenic	novelGene_2772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTAGAGGAAAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	111258441	111258259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_111258300_111258400
m54284U_201205_001509/91620071/ccs	chr6	-	3788	14	NIC	ENSMUSG00000030304.12	novel	4174	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	343.711520708072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	148113520	148080576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089599_148090983_148091083_148092327_148092384_148096696_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
m54284U_201205_001509/91621979/ccs	chr11	+	202	1	Intergenic	novelGene_6297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATTAATGGAACTGAGT	NA	False	NA	NA	False	NA	NA	NA	98097329	98097531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98097300_98097500
m54284U_201205_001509/91750780/ccs	chr11	-	180	1	Intergenic	novelGene_6173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAATAAATAGTATTTGC	2253	False	NA	NA	False	NA	NA	NA	87322814	87322634	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87322600_87322800
m54284U_201205_001509/9175836/ccs	chr9	-	3819	1	Intergenic	novelGene_4632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATTCTGGTTTGTTGCG	NA	False	NA	NA	False	NA	NA	NA	13669400	13665581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_13665600_13669400
m54284U_201205_001509/9176801/ccs	chr2	-	218	1	Intergenic	novelGene_777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCACATAACCTAGACT	6609	False	NA	NA	False	AATAAA	-35	NA	38919816	38919598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_38919600_38919800
m54284U_201205_001509/92276218/ccs	chr5	-	1609	1	ISM	ENSMUSG00000043323.18	ENSMUST00000069483.12	4720	19	85141	0	23600	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGTCCAGTGTTTTG	NA	False	NA	-1	True	GATAAA	-20	NA	110511228	110509619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_-_110509600_110511200
m54284U_201205_001509/92340627/ccs	chr8	-	179	1	Intergenic	novelGene_4578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGCTGGCCTCAAACTC	8581	False	NA	NA	False	NA	NA	NA	123947190	123947011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_123947000_123947200
m54284U_201205_001509/92341275/ccs	chr5	+	2992	13	NIC	ENSMUSG00000029635.16	novel	2973	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	30.8661987005563	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGTGTCAACTATATT	NA	False	NA	NA	False	AATAAA	-20	NA	146168039	146239684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_146168631_146196314_146196391_146205024_146205097_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
m54284U_201205_001509/92405926/ccs	chr15	-	4498	37	NNC	ENSMUSG00000034022.9	novel	4518	37	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	102.884910380243	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	False	NA	-5	True	TATAAA	-24	NA	76491791	76480008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_-_76480133_76480225_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
m54284U_201205_001509/9241619/ccs	chr4	+	218	1	Intergenic	novelGene_2365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACAGCTGGGCATGGTG	NA	False	NA	NA	False	AATGAA	-25	NA	147889139	147889357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_147889100_147889400
m54284U_201205_001509/9241924/ccs	chr3	-	6650	24	NIC	ENSMUSG00000039286.13	novel	6875	26	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	7	junction_23	25.6582896173334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	False	NA	-25	True	AATAAA	-18	NA	27764588	27470310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27764494
m54284U_201205_001509/92472346/ccs	chr9	-	181	1	Intergenic	novelGene_4977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTATTTCCTGTAAGGTG	NA	False	NA	NA	False	NA	NA	NA	80020117	80019936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_80019900_80020100
m54284U_201205_001509/92604086/ccs	chr9	+	2504	4	NNC	ENSMUSG00000109032.2	novel	505	4	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	14.9740516301441	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTATGTGTGTGCATT	NA	False	NA	16	True	AATAAA	-21	NA	75375813	75393963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_75375966_75388729_75388947_75390380_75390484_75391931
m54284U_201205_001509/92605079/ccs	chr3	-	182	1	Intergenic	novelGene_1607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGGGGGGGAGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	103190835	103190653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_103190700_103190800
m54284U_201205_001509/92669702/ccs	chr11	-	181	1	Intergenic	novelGene_5919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGATTTATTTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	67405153	67404972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_67405000_67405200
m54284U_201205_001509/92735753/ccs	chr2	+	2619	22	NNC	ENSMUSG00000046338.5	novel	2628	22	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	57.181931085181	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAGTACATGTCCAAT	5001	False	NA	14	True	AATAAA	-25	NA	127267118	127278012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_127267142_127269172_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273199_127273337_127273582_127273683_127273777_127273991_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275651_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
m54284U_201205_001509/92995758/ccs	chr6	-	192	1	Intergenic	novelGene_3192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATCCAGATGGAA	8693	False	NA	NA	False	NA	NA	NA	38245607	38245415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38245400_38245600
m54284U_201205_001509/93522352/ccs	chr10	-	1596	5	NNC	ENSMUSG00000020027.19	novel	4242	5	NA	NA	-92	141	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_4	16.5151445649137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGTGCTGGCACGGGGC	NA	False	NA	NA	False	ATTAAA	-13	NA	95253134	95223387	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_-_95224258_95224751_95224905_95226426_95226508_95250692_95251054_95253003
m54284U_201205_001509/9374103/ccs	chr13	+	174	1	Intergenic	novelGene_7002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAATGAAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	28326778	28326952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_28326800_28327000
m54284U_201205_001509/93783171/ccs	chr17	+	4053	27	NIC	ENSMUSG00000013787.16	novel	4026	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	113.940683208154	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGTGATTGTTTCAGG	7172	False	NA	20	True	AATAAA	-21	NA	35117946	35133028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125928_35126042_35126306_35126414_35126501_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
m54284U_201205_001509/94044779/ccs	chr8	-	175	1	Intergenic	novelGene_4305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTAAAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	65477320	65477145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_65477100_65477300
m54284U_201205_001509/94046937/ccs	chr7	+	3681	1	Antisense	novelGene_ENSMUSG00000042492.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCAGGCTGGCTTTAA	1942	False	NA	NA	False	NA	NA	NA	126797210	126800891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_+_126797200_126800900
m54284U_201205_001509/94177924/ccs	chr18	-	198	1	Intergenic	novelGene_8809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAAATGACAGGACTTT	NA	False	NA	NA	False	NA	NA	NA	10190631	10190433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_10190400_10190600
m54284U_201205_001509/94243329/ccs	chr7	-	4775	33	NNC	ENSMUSG00000037020.17	novel	4742	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	40.4868685308891	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCCTGTCTATAAAGCC	NA	False	NA	-4	True	AATAAA	-21	NA	29979844	29939562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_29939910_29940002_29940140_29940655_29941295_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942467_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
m54284U_201205_001509/9439637/ccs	chr9	+	3364	12	NIC	ENSMUSG00000032042.12	novel	2993	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	518	junction_4	144.409827737268	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAGGTTCATATTATTT	5512	False	NA	3	True	AATAAA	-18	NA	35122450	35128310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35126328_35126762_35126927_35127010_35127110_35127233
m54284U_201205_001509/94438245/ccs	chr6	-	2326	1	Intergenic	novelGene_3270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAGGAGCAGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	51507009	51504683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_51504700_51507000
m54284U_201205_001509/94635567/ccs	chr9	-	4003	24	NIC	ENSMUSG00000032480.18	novel	3968	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_19	185.874645239503	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	False	NA	-4	True	AATAAA	-18	NA	109946499	109913390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
m54284U_201205_001509/95028129/ccs	chr11	+	2589	1	Intergenic	novelGene_5705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATGTATTTCTTTTCTT	580	False	NA	1	True	AATAAA	-15	NA	16905925	16908514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_16905900_16908500
m54284U_201205_001509/95289466/ccs	chr4	-	156	1	Intergenic	novelGene_2137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATAAATAGAT	4208	False	NA	NA	False	NA	NA	NA	128931701	128931545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_128931500_128931700
m54284U_201205_001509/95357449/ccs	chr17	-	167	1	ISM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	24533	3024	9413	-3024	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATATTTAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	30807100	30806933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr17_-_30806900_30807100
m54284U_201205_001509/95553488/ccs	chr7	-	3098	12	NIC	ENSMUSG00000030403.10	novel	2215	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	1236	junction_8	122.662474476215	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCTGGAGTACTTTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	19005742	18990853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_18991680_18991786_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
m54284U_201205_001509/9570095/ccs	chr9	-	175	1	Intergenic	novelGene_4793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTAAACGTCCTTC	9946	False	NA	NA	False	NA	NA	NA	56918037	56917862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_56917900_56918000
m54284U_201205_001509/95881505/ccs	chr8	+	2096	1	NIC	ENSMUSG00000006273.15	novel	2825	14	NA	NA	0	-5723	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCAGGCTGGAAATT	NA	False	NA	NA	False	AATATA	-38	NA	69541419	69543515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_69541400_69543500
m54284U_201205_001509/95946998/ccs	chr5	-	184	1	Intergenic	novelGene_2910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAATAATAATACTAAAT	NA	False	NA	NA	False	NA	NA	NA	124773142	124772958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124773000_124773100
m54284U_201205_001509/96077823/ccs	chr7	-	4241	22	NNC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	59	0	intron_retention	FALSE	canonical	3	56	junction_21	268.831797128599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	7301	False	NA	-7	True	NA	NA	NA	126101213	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126100876
m54284U_201205_001509/96142055/ccs	chr13	+	150	1	Intergenic	novelGene_6988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTCCCCCTACTTGA	NA	False	NA	NA	False	NA	NA	NA	22105071	22105221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_22105100_22105200
m54284U_201205_001509/96142348/ccs	chr2	-	3272	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	-111	1292	-111	-1289	mono-exon	FALSE	NA	NA	NA	NA	NA	354	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTGCCCTGTGGTTCTGC	NA	False	NA	-7	True	AATAAA	-15	NA	152240094	152236822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_152236800_152240100
m54284U_201205_001509/96143416/ccs	chr5	-	212	1	Intergenic	novelGene_2582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTACTGCTCTATTTAA	NA	False	NA	NA	False	NA	NA	NA	64409842	64409630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_64409600_64409800
m54284U_201205_001509/9635805/ccs	chr12	-	193	2	Intergenic	novelGene_6917	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	338	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGAGATGGCTCAGTG	3845	False	NA	NA	False	NA	NA	NA	111534747	111516199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111516343_111534697
m54284U_201205_001509/96469010/ccs	chr3	+	216	1	Intergenic	novelGene_1673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGACAAAAAGGCCACCAA	NA	False	NA	NA	False	NA	NA	NA	127236334	127236550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_127236300_127236600
m54284U_201205_001509/96469278/ccs	chr18	+	187	1	Intergenic	novelGene_8982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCGGATGCACAGTGC	NA	False	NA	NA	False	NA	NA	NA	64490669	64490856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_64490700_64490900
m54284U_201205_001509/96470851/ccs	chr2	-	4415	19	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	346	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_8	177.634395304124	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165703579	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165703460
m54284U_201205_001509/96666188/ccs	chr2	+	3743	12	NNC	ENSMUSG00000017299.14	novel	1664	13	NA	NA	0	-393	intron_retention	FALSE	canonical	3	30	junction_7	193.295517342729	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACACAGGTAGTGAGC	NA	False	NA	9	True	ATTAAA	-9	NA	164587902	164610134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599978_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164609683_164609782
m54284U_201205_001509/96666843/ccs	chr11	+	226	1	Intergenic	novelGene_5906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCACAGTGTAAAGCC	NA	False	NA	NA	False	NA	NA	NA	62358354	62358580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_62358400_62358600
m54284U_201205_001509/96733986/ccs	chr5	+	195	1	Intergenic	novelGene_2475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTTAATCTTAAATATAC	NA	False	NA	NA	False	NA	NA	NA	21142555	21142750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_21142600_21142800
m54284U_201205_001509/96796762/ccs	chr15	+	4305	33	NNC	ENSMUSG00000022191.17	novel	3248	20	NA	NA	-3791	0	intron_retention	FALSE	canonical	3	27	junction_1	174.13569769274	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTTGCTACAGAGTAT	32	False	NA	30	True	ATTAAA	-20	NA	12833644	12935377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr15_+_12833700_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881810_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
m54284U_201205_001509/96797320/ccs	chr3	+	178	1	Intergenic	novelGene_1503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGAGCAGTTTCTG	NA	False	NA	3	True	NA	NA	NA	88801218	88801396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88801200_88801400
m54284U_201205_001509/96799471/ccs	chr15	+	1460	6	NIC	ENSMUSG00000022248.15	novel	1514	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_4	293.090839160831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTACTGTCCTGTGTCTTT	35	False	NA	27	True	AATAAA	-32	NA	10486134	10493775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492873_10492950_10493239
m54284U_201205_001509/96994189/ccs	chr16	-	2407	4	NIC	ENSMUSG00000022914.18	novel	2382	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	425	junction_3	5.71547606649408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	NA	False	NA	45	True	AATAAA	-17	NA	95883647	95867867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_95869828_95883013_95883208_95883321_95883381_95883453
m54284U_201205_001509/96995579/ccs	chr16	-	167	1	Intergenic	novelGene_8318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAATAATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	90106510	90106343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_90106300_90106500
m54284U_201205_001509/97060059/ccs	chr19	+	189	1	Intergenic	novelGene_9238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATTAAGCTTTAATAAG	NA	False	NA	NA	False	NA	NA	NA	37367035	37367224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_37367000_37367200
m54284U_201205_001509/97061539/ccs	chr1	-	189	1	Intergenic	novelGene_154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAGATACTAAAGTAAA	4	True	NA	NA	False	NA	NA	NA	60498514	60498325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_60498300_60498500
m54284U_201205_001509/97190464/ccs	chr13	-	182	1	Intergenic	novelGene_7013	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTCAGAATTTTATTAG	NA	False	NA	NA	False	NA	NA	NA	33069449	33069267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_33069300_33069400
m54284U_201205_001509/97190709/ccs	chr12	-	171	1	Intergenic	novelGene_6912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTTTAAAAAAGTCTAAA	NA	False	NA	NA	False	NA	NA	NA	111391488	111391317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111391300_111391500
m54284U_201205_001509/97191838/ccs	chr6	-	2854	1	Antisense	novelGene_ENSMUSG00000081126.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGGTCTCAGTGTCTTC	NA	False	NA	NA	False	NA	NA	NA	149264131	149261277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_149261300_149264100
m54284U_201205_001509/97321023/ccs	chr16	-	154	1	Intergenic	novelGene_8321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAATAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	90702919	90702765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_90702800_90702900
m54284U_201205_001509/97321126/ccs	chr4	-	173	1	Intergenic	novelGene_2132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTTTTAAAGAAGATAG	8793	False	NA	NA	False	NA	NA	NA	127132704	127132531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_127132500_127132700
m54284U_201205_001509/97323727/ccs	chr8	+	4384	1	NIC	ENSMUSG00000071793.13	novel	4009	6	NA	NA	0	-25039	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTAATAGTTGAGCATCT	NA	False	NA	NA	False	NA	NA	NA	20016465	20020849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_20016500_20020800
m54284U_201205_001509/97454291/ccs	chr14	+	617	6	NNC	ENSMUSG00000025290.18	novel	519	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	5009.07702476215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCTCTGCTGCTTAT	NA	False	NA	17	True	AATAAA	-16	NA	24540785	24545926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_+_24540827_24541732_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
m54284U_201205_001509/9765156/ccs	chr8	+	2806	1	Intergenic	novelGene_4250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	AAAACA	-45	NA	27693077	27695883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_27693100_27695900
m54284U_201205_001509/97847297/ccs	chr6	-	4089	16	NIC	ENSMUSG00000029924.13	novel	4030	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_15	86.9013744936689	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTTTGCCCTTAAGTG	NA	False	NA	-8	True	AATAAA	-16	NA	39354609	39311706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39349012_39349072_39354552
m54284U_201205_001509/97847738/ccs	chr8	-	4148	7	NNC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	132.85664789121	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGGAGTTGCTTCCTT	NA	False	NA	NA	False	AATAAA	-23	NA	87611886	87570946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87579209_87579786_87579918_87587053_87588739_87611449
m54284U_201205_001509/9830615/ccs	chr1	-	194	1	Intergenic	novelGene_465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCATGGCATTGACCTGA	8036	False	NA	NA	False	NA	NA	NA	170636349	170636155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_170636200_170636300
m54284U_201205_001509/9831870/ccs	chr3	-	5665	1	FSM	ENSMUSG00000065738.3	ENSMUST00000083804.3	81	1	-1265	-4319	-1265	4319	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGTGTATATAGCT	6154	False	NA	-4	True	AATAAA	-44	NA	153618592	153612927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_153612900_153618600
m54284U_201205_001509/983192/ccs	chr5	+	175	1	Intergenic	novelGene_2453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAATTTCTTTTCAAAGTT	NA	False	NA	NA	False	NA	NA	NA	3620905	3621080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_3620900_3621100
m54284U_201205_001509/984519/ccs	chr8	-	201	1	Intergenic	novelGene_4552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATGTTCATTGAGAAC	NA	False	NA	0	True	NA	NA	NA	121047827	121047626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_121047600_121047800
m54284U_201205_001509/985533/ccs	chr5	+	2189	3	NIC	ENSMUSG00000106918.4	novel	478	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	1273	junction_1	530	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTGTCTCTTAGAGGT	NA	False	NA	17	True	AATAAA	-20	NA	31771328	31779986	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_31771367_31771946_31773832_31779720
m54284U_201205_001509/98698050/ccs	chr16	-	139	1	Intergenic	novelGene_8259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAGTCAGTCTCAGAC	NA	False	NA	NA	False	AATAAA	-14	NA	42847618	42847479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_42847500_42847600
m54284U_201205_001509/98765261/ccs	chr7	+	3433	3	Genic_Genomic	ENSMUSG00000041117.9	novel	4809	1	NA	NA	1304	0	multi-exon	TRUE	canonical	1	5	junction_1	11	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTTTCCGAGGTGGC	5980	False	NA	20	True	AATAAA	-17	NA	16727936	16731441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_16729668_16729715_16730028_16730051
m54284U_201205_001509/98829469/ccs	chr16	+	180	1	Intergenic	novelGene_8066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGGATATTTTGAG	NA	False	NA	NA	False	NA	NA	NA	13380556	13380736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13380600_13380700
m54284U_201205_001509/98896267/ccs	chr18	+	1831	10	NIC	ENSMUSG00000024395.10	novel	685	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	2.62936879248872	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGAGTGTCTGTGTGGTT	NA	False	NA	NA	False	AATGAA	-15	NA	32055342	32091672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_32055530_32074792_32074953_32077191_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
m54284U_201205_001509/99353763/ccs	chr2	+	4010	6	NIC	ENSMUSG00000055612.16	novel	2424	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	1115	junction_3	100.472085675575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTTTATTTTTGTTT	8569	False	NA	NA	False	AATAAA	-16	NA	72306502	72317237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72314361_72314942_72315657_72316063
m54284U_201205_001509/99549303/ccs	chr17	-	6610	1	NIC	ENSMUSG00000095677.3	novel	3545	4	NA	NA	2607	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCATGTAGCTTTGATT	NA	False	NA	NA	False	AATAAA	-19	NA	6920610	6914000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_6914000_6920600
m54284U_201205_001509/99550757/ccs	chr6	+	171	1	Intergenic	novelGene_3502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAACAAACAAACAAA	NA	False	NA	NA	False	NA	NA	NA	124900611	124900782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_124900600_124900800
m54284U_201205_001509/99877783/ccs	chr18	-	5916	1	ISM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	12778	0	1535	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTAGTGCTGGAAGTT	NA	False	NA	-2	True	AATAAA	-29	NA	61331906	61325990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr18_-_61326000_61331900
m54284U_201205_001509/99944076/ccs	chr11	+	179	1	Intergenic	novelGene_6196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGCCAGGCGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	88842659	88842838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_88842700_88842800
m54284U_201217_021426/100075080/ccs	chr2	-	214	1	Intergenic	novelGene_683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAAGAGGCAGGATGGA	NA	False	NA	NA	False	NA	NA	NA	30181370	30181156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_30181200_30181400
m54284U_201217_021426/100139445/ccs	chr10	+	1258	1	FSM	ENSMUSG00000045455.9	ENSMUST00000052902.9	613	1	0	-645	0	645	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATCTGCATTGATTTCC	NA	False	NA	NA	False	NA	NA	NA	11484966	11486224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr10_+_11485000_11486200
m54284U_201217_021426/100140521/ccs	chr9	-	193	1	Intergenic	novelGene_4730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGTCAAGTGCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	44208277	44208084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_44208100_44208300
m54284U_201217_021426/100205798/ccs	chr14	-	260	1	Intergenic	novelGene_7451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAGGAAGAAAGGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	52582646	52582386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_52582400_52582600
m54284U_201217_021426/10027240/ccs	chr5	+	201	1	Intergenic	novelGene_2468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTCTTTGAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	12975206	12975407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_12975200_12975400
m54284U_201217_021426/100272693/ccs	chr19	+	176	1	Intergenic	novelGene_9202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTAAAGAACA	6671	False	NA	NA	False	NA	NA	NA	29318927	29319103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_29318900_29319100
m54284U_201217_021426/100336048/ccs	chr6	-	189	1	Intergenic	novelGene_3415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGATTAGTACTCCACT	NA	False	NA	NA	False	NA	NA	NA	102682470	102682281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_102682300_102682500
m54284U_201217_021426/100532839/ccs	chr5	-	175	1	Intergenic	novelGene_2615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAACCAACCAGTTTC	NA	False	NA	NA	False	NA	NA	NA	73418131	73417956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_73418000_73418100
m54284U_201217_021426/100534420/ccs	chrX	-	180	1	Intergenic	novelGene_9556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	100187204	100187024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_100187000_100187200
m54284U_201217_021426/100535089/ccs	chr4	+	197	1	Intergenic	novelGene_2363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTATTTACACTAACACAA	NA	False	NA	NA	False	NA	NA	NA	147791369	147791566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_147791400_147791600
m54284U_201217_021426/100597874/ccs	chr11	+	219	1	Intergenic	novelGene_5801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACGGGGTCTGGAGAGATG	4160	False	NA	NA	False	NA	NA	NA	50207123	50207342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_50207100_50207300
m54284U_201217_021426/100597983/ccs	chr1	-	5627	30	NNC	ENSMUSG00000040648.16	novel	6239	31	NA	NA	340	-95	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_18	75.4540595400284	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTATTTGTGTTCTTT	9174	False	NA	-17	True	ATTAAA	-35	NA	97697796	97633867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_97635553_97639447_97639574_97640728_97640870_97644266_97644330_97645166_97645287_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
m54284U_201217_021426/100598550/ccs	chrX	-	237	1	Intergenic	novelGene_9445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCTATAAACCAGAAAG	NA	False	NA	NA	False	NA	NA	NA	47465810	47465573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_47465600_47465800
m54284U_201217_021426/100795063/ccs	chr7	+	182	1	Intergenic	novelGene_3864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAAGACCCTTCTCGG	NA	False	NA	NA	False	NA	NA	NA	49501386	49501568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_49501400_49501600
m54284U_201217_021426/100927754/ccs	chr7	-	190	1	Intergenic	novelGene_3875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGTTGCCTTGGTCATGG	NA	False	NA	NA	False	NA	NA	NA	63659461	63659271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_63659300_63659500
m54284U_201217_021426/10094705/ccs	chrX	+	167	1	Intergenic	novelGene_9590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGAAACAGAG	NA	False	NA	NA	False	NA	NA	NA	102971592	102971759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_102971600_102971800
m54284U_201217_021426/100993827/ccs	chr7	-	179	1	Intergenic	novelGene_4107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTAGATAAAAGGCTGG	9940	False	NA	NA	False	NA	NA	NA	127439197	127439018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127439000_127439200
m54284U_201217_021426/101056541/ccs	chr4	-	176	1	Intergenic	novelGene_2075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTATACATTGT	NA	False	NA	NA	False	NA	NA	NA	120755300	120755124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_120755100_120755300
m54284U_201217_021426/101056576/ccs	chr14	+	247	1	Intergenic	novelGene_7488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATATAGGAGAATTTAAG	872	False	NA	NA	False	AATAAA	-6	NA	57890866	57891113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_57890900_57891100
m54284U_201217_021426/101058254/ccs	chr6	+	917	1	ISM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	1167	2021	1115	690	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAGCAAGTGGAGTTG	NA	False	NA	NA	False	NA	NA	NA	125170294	125171211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_+_125170300_125171200
m54284U_201217_021426/101059103/ccs	chr2	-	192	1	Intergenic	novelGene_1280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	169944400	169944208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_169944200_169944400
m54284U_201217_021426/101188919/ccs	chr3	-	2768	13	NNC	ENSMUSG00000055436.19	novel	2654	12	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_11	259.623271406004	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTTCTGTAGAGCTG	NA	False	NA	-27	True	AATAAA	-17	NA	157737403	157716555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_157717838_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157728879_157728997_157732361_157732496_157737088
m54284U_201217_021426/101189213/ccs	chr7	-	193	1	Intergenic	novelGene_4089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTATTCTCCTTTCA	NA	False	NA	NA	False	NA	NA	NA	126242548	126242355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_126242400_126242500
m54284U_201217_021426/101190370/ccs	chrX	-	188	1	Intergenic	novelGene_9388	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCTCTTGATGTCAGA	NA	False	NA	NA	False	NA	NA	NA	12595201	12595013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_12595000_12595200
m54284U_201217_021426/101254206/ccs	chr9	-	182	1	Intergenic	novelGene_4986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCATATTTAAGACATAC	NA	False	NA	NA	False	NA	NA	NA	86535285	86535103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_86535100_86535300
m54284U_201217_021426/101384956/ccs	chr4	-	210	1	Intergenic	novelGene_1755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCATACATAATCTTTAG	NA	False	NA	NA	False	AATAAA	-9	NA	13897731	13897521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_13897500_13897700
m54284U_201217_021426/101515535/ccs	chr8	-	185	1	Intergenic	novelGene_4189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTCTTATGAAGTCCT	9640	False	NA	NA	False	NA	NA	NA	4207844	4207659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_4207700_4207800
m54284U_201217_021426/101649200/ccs	chr7	-	3581	24	NIC	ENSMUSG00000032637.16	novel	3894	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	37	junction_1	281.784832578788	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTATGGGTTTGATTC	6928	False	NA	0	True	NA	NA	NA	126101586	126090879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091615_126091781_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
m54284U_201217_021426/101712301/ccs	chrX	+	186	1	Intergenic	novelGene_9688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAGATTCGTTTGCATTC	NA	False	NA	NA	False	NA	NA	NA	153825074	153825260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_153825100_153825300
m54284U_201217_021426/101713237/ccs	chr5	-	203	1	Intergenic	novelGene_2925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCCATACACATAAAATAC	NA	False	NA	NA	False	NA	NA	NA	125655239	125655036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125655000_125655200
m54284U_201217_021426/101778178/ccs	chr9	+	199	1	Intergenic	novelGene_5084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAGAGTTGACTGAGA	NA	False	NA	NA	False	NA	NA	NA	108252896	108253095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108252900_108253100
m54284U_201217_021426/101779026/ccs	chr13	-	203	1	Intergenic	novelGene_6982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTTGCATTTCTTTA	NA	False	NA	NA	False	NA	NA	NA	20197920	20197717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_20197700_20197900
m54284U_201217_021426/101779853/ccs	chr16	-	3822	2	NIC	ENSMUSG00000035764.6	novel	4179	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTAGTCCATGTCA	7823	False	NA	2	True	ATTAAA	-17	NA	32065976	32048929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_32052087_32065311
m54284U_201217_021426/101909013/ccs	chr11	-	242	1	Intergenic	novelGene_5832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGAAAGGCACTACAAAAA	NA	False	NA	NA	False	NA	NA	NA	53244518	53244276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_53244300_53244500
m54284U_201217_021426/101976244/ccs	chr12	-	206	1	Intergenic	novelGene_6928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAAGGCTATCCTTGG	3748	False	NA	NA	False	NA	NA	NA	111709453	111709247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111709200_111709500
m54284U_201217_021426/102039556/ccs	chr1	-	208	1	Intergenic	novelGene_293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTTGGGGGCTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	128190379	128190171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_128190200_128190400
m54284U_201217_021426/102105106/ccs	chr11	+	168	1	Intergenic	novelGene_6331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAAAATAATGATTGA	NA	False	NA	NA	False	NA	NA	NA	101225795	101225963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101225800_101226000
m54284U_201217_021426/102105510/ccs	chr11	-	3504	1	Intergenic	novelGene_6519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAAAAGAAATT	4496	False	NA	NA	False	NA	NA	NA	120743505	120740001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_120740000_120743500
m54284U_201217_021426/102107280/ccs	chr12	-	204	1	Intergenic	novelGene_6775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGGAAAGTCGACCAC	NA	False	NA	NA	False	NA	NA	NA	81925666	81925462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_81925500_81925700
m54284U_201217_021426/102172789/ccs	chr5	-	206	1	Intergenic	novelGene_3067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTCCCAACAACCACA	NA	False	NA	NA	False	NA	NA	NA	146269147	146268941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_146268900_146269100
m54284U_201217_021426/102236932/ccs	chr4	-	174	1	Intergenic	novelGene_2371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAATTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	148675028	148674854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_148674900_148675000
m54284U_201217_021426/10226147/ccs	chr11	-	176	1	Intergenic	novelGene_6203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	89644223	89644047	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_89644000_89644200
m54284U_201217_021426/102301760/ccs	chr12	-	2654	1	NIC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	0	-22641	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	101924502	101921848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_101921800_101924500
m54284U_201217_021426/102301823/ccs	chr11	-	183	1	Intergenic	novelGene_5652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATATAGAACTTTGAAC	2349	False	NA	NA	False	NA	NA	NA	3391018	3390835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_3390800_3391000
m54284U_201217_021426/102304411/ccs	chr11	-	184	1	Intergenic	novelGene_6385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAATATATTATATG	NA	False	NA	NA	False	NA	NA	NA	106331927	106331743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106331700_106331900
m54284U_201217_021426/102368351/ccs	chr2	+	177	1	Intergenic	novelGene_630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAAAAAGAGTGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	24829223	24829400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_24829200_24829400
m54284U_201217_021426/102369228/ccs	chr14	-	183	1	Intergenic	novelGene_7352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAACAGAACACGGTA	NA	False	NA	NA	False	NA	NA	NA	21485746	21485563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_21485600_21485700
m54284U_201217_021426/102369944/ccs	chr9	-	185	1	Intergenic	novelGene_4882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACTCACTTCCAGGCAG	NA	False	NA	NA	False	NA	NA	NA	65489563	65489378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65489400_65489600
m54284U_201217_021426/102434073/ccs	chr2	+	174	1	Intergenic	novelGene_748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGTGTGGTGGTGCAT	NA	False	NA	NA	False	NA	NA	NA	34533196	34533370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34533200_34533400
m54284U_201217_021426/102630841/ccs	chr1	+	154	1	Intergenic	novelGene_99	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	39468567	39468721	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_39468600_39468700
m54284U_201217_021426/102697625/ccs	chr12	-	182	1	Intergenic	novelGene_6763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATACCCTGTCTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	80826211	80826029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80826000_80826200
m54284U_201217_021426/102761312/ccs	chr1	-	176	1	Intergenic	novelGene_535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	183304215	183304039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_183304000_183304200
m54284U_201217_021426/10290402/ccs	chr7	-	209	1	Intergenic	novelGene_3855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATAACTGTTCTTCCTG	6016	False	NA	NA	False	AAGAAA	-12	NA	46821583	46821374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_46821400_46821600
m54284U_201217_021426/10290562/ccs	chr2	+	1785	1	Genic_Genomic	ENSMUSG00000075514.5	novel	NA	NA	NA	NA	-496	345	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTACTACTGTATATTT	3113	False	NA	2	True	AATAAA	-13	NA	20973368	20975153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_20973400_20975200
m54284U_201217_021426/102957743/ccs	chr15	+	145	1	Intergenic	novelGene_7842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAGAGAGAAAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	81374831	81374976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_81374800_81375000
m54284U_201217_021426/102959069/ccs	chr1	-	181	1	Intergenic	novelGene_150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAAAAGACTA	NA	False	NA	NA	False	NA	NA	NA	60059713	60059532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_60059500_60059700
m54284U_201217_021426/102959569/ccs	chr8	+	209	1	Intergenic	novelGene_4476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGGAAGGGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	108126717	108126926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_108126700_108126900
m54284U_201217_021426/102959958/ccs	chr14	-	1235	1	FSM	ENSMUSG00000097589.10	ENSMUST00000193208.2	4098	1	2052	811	2052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATAGTTTGTATGTTTCTT	NA	False	NA	-4	True	AATAAA	-17	NA	61867289	61866054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_61866100_61867300
m54284U_201217_021426/103022711/ccs	chr9	+	161	1	Intergenic	novelGene_4805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAATAAATAAATATT	2159	False	NA	NA	False	NA	NA	NA	57829449	57829610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_57829400_57829600
m54284U_201217_021426/103024797/ccs	chr17	-	176	1	Intergenic	novelGene_8371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTATAGGAGT	NA	False	NA	NA	False	NA	NA	NA	13201476	13201300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_13201300_13201500
m54284U_201217_021426/103088762/ccs	chr2	+	133	1	Intergenic	novelGene_931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTTTCAAAACCTATGCA	NA	False	NA	NA	False	NA	NA	NA	91468328	91468461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_91468300_91468500
m54284U_201217_021426/103090990/ccs	chr17	-	172	1	Intergenic	novelGene_8399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGATAAAATTTCA	NA	False	NA	NA	False	NA	NA	NA	23912141	23911969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_23912000_23912100
m54284U_201217_021426/103155336/ccs	chr3	-	184	1	Intergenic	novelGene_1427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAGTCATTCACGCATG	NA	False	NA	NA	False	NA	NA	NA	68506409	68506225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_68506200_68506400
m54284U_201217_021426/103220842/ccs	chr9	-	227	1	Intergenic	novelGene_4897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGATTCATTCTGTCAA	NA	False	NA	NA	False	NA	NA	NA	66439944	66439717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66439700_66439900
m54284U_201217_021426/103350419/ccs	chr12	+	191	1	Intergenic	novelGene_6593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGACAACCAAATCTCCA	NA	False	NA	NA	False	NA	NA	NA	24799714	24799905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_24799700_24799900
m54284U_201217_021426/103415926/ccs	chr18	+	5580	1	Intergenic	novelGene_8800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTCAAAATGAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	6118537	6124117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_6118500_6124100
m54284U_201217_021426/103416563/ccs	chr2	-	174	1	Intergenic	novelGene_927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACCCAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	91128024	91127850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91127800_91128000
m54284U_201217_021426/103547205/ccs	chr11	-	185	1	Intergenic	novelGene_5978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATATATATTAATAGTG	2547	False	NA	NA	False	NA	NA	NA	72538007	72537822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_72537800_72538000
m54284U_201217_021426/10357092/ccs	chr7	+	175	1	Intergenic	novelGene_3877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	64953233	64953408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_64953200_64953400
m54284U_201217_021426/103613084/ccs	chr5	+	170	1	Intergenic	novelGene_2736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGCTCACATAG	8158	False	NA	NA	False	NA	NA	NA	108096103	108096273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_108096100_108096300
m54284U_201217_021426/103680556/ccs	chr2	-	179	1	Intergenic	novelGene_1261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATATTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	168284985	168284806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_168284800_168285000
m54284U_201217_021426/103810047/ccs	chr11	+	177	1	Intergenic	novelGene_6039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTATGATTA	8514	False	NA	NA	False	NA	NA	NA	76706017	76706194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_76706000_76706200
m54284U_201217_021426/103810660/ccs	chr15	-	181	1	Intergenic	novelGene_7904	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAAAAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	88756901	88756720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_88756700_88756900
m54284U_201217_021426/103811256/ccs	chr7	-	210	1	Intergenic	novelGene_3716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCCCAACAACCACATG	NA	False	NA	NA	False	NA	NA	NA	26948507	26948297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_26948300_26948500
m54284U_201217_021426/103941672/ccs	chr1	-	191	1	Intergenic	novelGene_136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAACCCAGGCATGCCTG	NA	False	NA	NA	False	NA	NA	NA	59271488	59271297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59271300_59271500
m54284U_201217_021426/104007544/ccs	chr4	+	217	1	Intergenic	novelGene_2019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTATTTAGTTGTATTT	NA	False	NA	NA	False	NA	NA	NA	116485953	116486170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116486000_116486200
m54284U_201217_021426/104071672/ccs	chr4	-	194	1	Intergenic	novelGene_1998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCGATTCTCTTTTTTCC	NA	False	NA	NA	False	NA	NA	NA	108355759	108355565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108355600_108355800
m54284U_201217_021426/104268719/ccs	chr3	-	1764	1	Genic_Genomic	ENSMUSG00000001420.14	novel	NA	NA	NA	NA	-360	-1607	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTTGCAGTGTCATC	NA	False	NA	NA	False	AATAAA	-14	NA	88243815	88242051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr3_-_88242100_88243800
m54284U_201217_021426/104270636/ccs	chr2	-	107	1	Intergenic	novelGene_978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTATCTGTATTACAAAAG	NA	False	NA	NA	False	NA	NA	NA	108954180	108954073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_108954100_108954200
m54284U_201217_021426/104335201/ccs	chr9	-	177	1	Intergenic	novelGene_5091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAATGTAAA	9541	False	NA	NA	False	NA	NA	NA	108640124	108639947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_108639900_108640100
m54284U_201217_021426/104530888/ccs	chr10	-	187	1	Intergenic	novelGene_5246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTTCT	NA	False	NA	NA	False	NA	NA	NA	31334412	31334225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_31334200_31334400
m54284U_201217_021426/104531839/ccs	chr1	+	208	1	Intergenic	novelGene_351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTTGGATAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	136591998	136592206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_136592000_136592200
m54284U_201217_021426/104595743/ccs	chr2	-	168	1	Intergenic	novelGene_840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAGAAAAAAAAGGCAA	NA	False	NA	NA	False	NA	NA	NA	69767700	69767532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_69767500_69767700
m54284U_201217_021426/104727526/ccs	chr15	-	228	1	Intergenic	novelGene_7911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTCCTGCACAAAGAGACA	NA	False	NA	NA	False	NA	NA	NA	93321201	93320973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_93321000_93321200
m54284U_201217_021426/104728161/ccs	chr14	-	5377	1	Intergenic	novelGene_7510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAGAATGTAAAAGGC	1602	False	NA	NA	False	NA	NA	NA	63858678	63853301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_63853300_63858700
m54284U_201217_021426/104792180/ccs	chr13	+	176	1	Intergenic	novelGene_7271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGACAACAGAGGA	NA	False	NA	NA	False	NA	NA	NA	97999630	97999806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97999600_97999800
m54284U_201217_021426/104858129/ccs	chr15	+	3436	1	NIC	ENSMUSG00000023025.17	novel	6530	16	NA	NA	0	-16220	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACCCAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	99870717	99874153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_+_99870700_99874200
m54284U_201217_021426/10487338/ccs	chr14	+	166	1	Intergenic	novelGene_7404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAATAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	40888397	40888563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_40888400_40888600
m54284U_201217_021426/10488025/ccs	chr11	-	103	1	Intergenic	novelGene_5817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTAATCTTGGGGGTGG	5811	False	NA	NA	False	NA	NA	NA	51994976	51994873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_51994900_51995000
m54284U_201217_021426/10488104/ccs	chr8	-	176	1	Intergenic	novelGene_4512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATGTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	112281743	112281567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_112281600_112281700
m54284U_201217_021426/1049024/ccs	chr19	+	1095	1	NIC	ENSMUSG00000024759.15	novel	437	3	NA	NA	0	-13950	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	7471762	7472857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_7471800_7472900
m54284U_201217_021426/104988729/ccs	chr4	+	199	1	Intergenic	novelGene_2052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCGAGGAAACCAGAAG	NA	False	NA	NA	False	NA	NA	NA	118034888	118035087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_118034900_118035100
m54284U_201217_021426/104990116/ccs	chr9	-	156	1	Intergenic	novelGene_5010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTATTTACGCGTTCGA	NA	False	NA	NA	False	NA	NA	NA	96086945	96086789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_96086800_96086900
m54284U_201217_021426/1050390/ccs	chr17	-	188	1	Intergenic	novelGene_8767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGAGGGACT	NA	False	NA	NA	False	NA	NA	NA	85414974	85414786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_85414800_85415000
m54284U_201217_021426/105119744/ccs	chr6	-	118	1	Intergenic	novelGene_3118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGACATCTCGTTTGTT	NA	False	NA	NA	False	NA	NA	NA	24125350	24125232	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_24125200_24125400
m54284U_201217_021426/105120705/ccs	chr15	-	129	1	Intergenic	novelGene_7615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAAAGATAAA	6549	False	NA	NA	False	NA	NA	NA	7109249	7109120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_7109100_7109200
m54284U_201217_021426/105252913/ccs	chr5	-	179	1	Intergenic	novelGene_3082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAGAAGCTT	NA	False	NA	-2	True	NA	NA	NA	148718959	148718780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_148718800_148719000
m54284U_201217_021426/105318370/ccs	chr4	-	177	1	Intergenic	novelGene_2011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAAAGGCCGG	5539	False	NA	NA	False	NA	NA	NA	116050803	116050626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116050600_116050800
m54284U_201217_021426/105318487/ccs	chr4	-	179	1	Intergenic	novelGene_2442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTGGAAAAAAATAAC	NA	False	NA	NA	False	NA	NA	NA	156299683	156299504	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_156299500_156299700
m54284U_201217_021426/105318526/ccs	chr16	-	195	1	Intergenic	novelGene_8235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTTACATATTTTCAG	NA	False	NA	NA	False	NA	NA	NA	34833941	34833746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_34833700_34833900
m54284U_201217_021426/105318866/ccs	chr15	-	173	1	Intergenic	novelGene_7807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAAAGAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	79073245	79073072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_79073100_79073200
m54284U_201217_021426/105447424/ccs	chr11	-	201	1	Intergenic	novelGene_5931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTATTTTAGGGCCGGG	NA	False	NA	NA	False	NA	NA	NA	68731635	68731434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68731400_68731600
m54284U_201217_021426/105448452/ccs	chr11	-	166	1	Intergenic	novelGene_6187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAACAAACAGAAATA	NA	False	NA	NA	False	NA	NA	NA	88104566	88104400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88104400_88104600
m54284U_201217_021426/105450075/ccs	chr13	-	2121	1	Genic_Genomic	ENSMUSG00000113623.2	novel	NA	NA	NA	NA	4845	1580	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCATAAAAATATAATGTA	7784	False	NA	NA	False	AATAAA	-21	NA	62550847	62548726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_-_62548700_62550800
m54284U_201217_021426/105514216/ccs	chr1	-	5849	40	NIC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-103	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_38	284.428767648207	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTTCCAAAGACAACTC	7784	False	NA	17	True	NA	NA	NA	84817135	84701984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722892_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84792543_84792691_84816949
m54284U_201217_021426/10553597/ccs	chr17	-	206	1	Intergenic	novelGene_8691	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGAACCCATCCCCCAC	NA	False	NA	NA	False	NA	NA	NA	66968831	66968625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66968600_66968800
m54284U_201217_021426/105645300/ccs	chr15	-	189	1	Intergenic	novelGene_8022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGGAGTTTTTTAGTTT	7084	False	NA	NA	False	NA	NA	NA	103346686	103346497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_103346500_103346700
m54284U_201217_021426/105710775/ccs	chr19	+	185	1	Intergenic	novelGene_9119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAACAACAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	6210446	6210631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6210400_6210600
m54284U_201217_021426/105973249/ccs	chr2	+	174	1	Intergenic	novelGene_997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGACGTCTTATGGG	NA	False	NA	NA	False	NA	NA	NA	118860534	118860708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_118860500_118860700
m54284U_201217_021426/105974540/ccs	chr7	+	185	1	Intergenic	novelGene_3661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACTTCACCTATGCAC	NA	False	NA	NA	False	NA	NA	NA	15561440	15561625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_15561400_15561600
m54284U_201217_021426/106103134/ccs	chr12	+	166	1	Intergenic	novelGene_6858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTAAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	102682099	102682265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_102682100_102682300
m54284U_201217_021426/106104987/ccs	chr11	-	1460	1	Genic_Genomic	ENSMUSG00000018677.10	novel	NA	NA	NA	NA	1222	1173	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGCTTGAGACACTGTG	2892	False	NA	-11	True	ATTAAA	-22	NA	102294097	102292637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_-_102292600_102294100
m54284U_201217_021426/106170864/ccs	chr9	-	191	1	Intergenic	novelGene_5143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATGAATTTTTATGAT	NA	False	NA	NA	False	NA	NA	NA	119103949	119103758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_119103800_119103900
m54284U_201217_021426/10617187/ccs	chr16	-	919	5	NNC	ENSMUSG00000002847.8	novel	1974	11	NA	NA	10071	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	83.929658047677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTTTGGTTGTTTTGTTG	NA	False	NA	-3	True	AATAAA	-20	NA	38228085	38216478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr16_-_38216898_38217700_38217866_38221233_38221347_38225898_38225989_38227953
m54284U_201217_021426/106236409/ccs	chr2	-	182	1	Intergenic	novelGene_906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGAAAGAGCTAG	NA	False	NA	NA	False	NA	NA	NA	87353262	87353080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_87353100_87353300
m54284U_201217_021426/106300835/ccs	chr13	+	191	1	Intergenic	novelGene_7078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGGGGGAGGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	53611416	53611607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_53611400_53611600
m54284U_201217_021426/106301822/ccs	chr6	-	184	1	Intergenic	novelGene_3251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAAAGAGTGGTTCAA	NA	False	NA	NA	False	NA	NA	NA	47887831	47887647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47887600_47887800
m54284U_201217_021426/106301984/ccs	chr6	+	196	1	Intergenic	novelGene_3375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGACGAGCTAAAAGATT	1274	False	NA	NA	False	NA	NA	NA	87812248	87812444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_87812200_87812400
m54284U_201217_021426/106433211/ccs	chr7	-	2857	4	NIC	ENSMUSG00000030678.8	novel	379	3	NA	NA	0	0	intron_retention	TRUE	canonical	2	9	junction_3	249.716283454288	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTCTGAGTTCCTAAG	NA	False	NA	-31	True	AATAAA	-14	NA	126626209	126621305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126622341_126623615_126625327_126625399_126625424_126626122
m54284U_201217_021426/106628281/ccs	chr12	+	185	1	Intergenic	novelGene_6680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATGAGATGGGTACAC	NA	False	NA	NA	False	NA	NA	NA	69273480	69273665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_69273500_69273700
m54284U_201217_021426/106628975/ccs	chr1	-	196	1	Intergenic	novelGene_189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAAAAAGACTGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	74621271	74621075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_74621100_74621300
m54284U_201217_021426/106692732/ccs	chr11	+	179	1	Intergenic	novelGene_6208	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGGGAACCTGAGATTAT	5	True	NA	NA	False	NA	NA	NA	94076411	94076590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_94076400_94076600
m54284U_201217_021426/106694892/ccs	chr17	+	173	1	Intergenic	novelGene_8423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAAAACCAAA	822	False	NA	NA	False	NA	NA	NA	25575244	25575417	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_25575200_25575400
m54284U_201217_021426/106758226/ccs	chr4	-	183	1	Intergenic	novelGene_2356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGACTGTTTTTCTATT	NA	False	NA	NA	False	NA	NA	NA	147385717	147385534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_147385500_147385700
m54284U_201217_021426/10682517/ccs	chr11	+	184	1	Intergenic	novelGene_6314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTATACTGGGCTCCAAA	NA	False	NA	NA	False	NA	NA	NA	99135418	99135602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_99135400_99135600
m54284U_201217_021426/106826319/ccs	chr4	-	198	1	Intergenic	novelGene_2245	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAGGTCTTGCTATGTAG	6777	False	NA	NA	False	NA	NA	NA	135211856	135211658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135211700_135211900
m54284U_201217_021426/10685135/ccs	chr6	-	181	1	Intergenic	novelGene_3392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAGACATAAAGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	92162214	92162033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_92162000_92162200
m54284U_201217_021426/106954894/ccs	chr9	-	178	1	Intergenic	novelGene_5063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGAACATTGGG	6046	False	NA	NA	False	NA	NA	NA	106121045	106120867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_106120900_106121000
m54284U_201217_021426/106954967/ccs	chr12	-	180	1	Intergenic	novelGene_6767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTTTTTTTTAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	81016659	81016479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_81016500_81016700
m54284U_201217_021426/106956159/ccs	chr19	-	146	1	Intergenic	novelGene_9097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCCATACCCCAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	5186149	5186003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5186000_5186100
m54284U_201217_021426/107153460/ccs	chr7	-	190	1	Intergenic	novelGene_3793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTGAGGAAAGAGGATT	9677	False	NA	NA	False	NA	NA	NA	35046897	35046707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_35046700_35046900
m54284U_201217_021426/107154148/ccs	chr14	+	172	1	Intergenic	novelGene_7460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTAAAGAGGCTCTC	NA	False	NA	NA	False	NA	NA	NA	54796001	54796173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54796000_54796200
m54284U_201217_021426/107283440/ccs	chr7	+	203	1	Intergenic	novelGene_3628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCACTGTCTAAAAAATA	NA	False	NA	NA	False	NA	NA	NA	4440415	4440618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_4440400_4440600
m54284U_201217_021426/107348208/ccs	chr15	+	201	1	Intergenic	novelGene_7829	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGCTGCATAGTATCAT	NA	False	NA	3	True	NA	NA	NA	80888922	80889123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_80888900_80889100
m54284U_201217_021426/107350184/ccs	chr7	+	218	1	Intergenic	novelGene_3771	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATCTCAGGCAGAACTTG	4539	False	NA	NA	False	NA	NA	NA	29773185	29773403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29773200_29773400
m54284U_201217_021426/107415026/ccs	chr4	-	138	1	Intergenic	novelGene_1784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAAAGCTTT	NA	False	NA	NA	False	NA	NA	NA	32925973	32925835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_32925800_32926000
m54284U_201217_021426/107480258/ccs	chr16	-	205	1	Intergenic	novelGene_8065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCCGAGGAGCCGCGA	NA	False	NA	NA	False	NA	NA	NA	12386062	12385857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_12385900_12386100
m54284U_201217_021426/10748584/ccs	chrX	-	187	1	Intergenic	novelGene_9413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAGAGAATCTCGGC	NA	False	NA	NA	False	NA	NA	NA	23493366	23493179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_23493200_23493400
m54284U_201217_021426/107547293/ccs	chr13	-	177	1	Intergenic	novelGene_7223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAATGGCATGT	NA	False	NA	NA	False	NA	NA	NA	81954912	81954735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_81954700_81954900
m54284U_201217_021426/107743778/ccs	chr10	-	148	1	Intergenic	novelGene_5382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGAGTGAGCGACCTTC	NA	False	NA	NA	False	NA	NA	NA	69147712	69147564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_69147600_69147700
m54284U_201217_021426/107938846/ccs	chr10	-	193	1	Intergenic	novelGene_5624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTGCAGCTCTTACA	7979	False	NA	NA	False	NA	NA	NA	128168655	128168462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128168500_128168700
m54284U_201217_021426/108004814/ccs	chr2	+	3859	1	NIC	ENSMUSG00000017764.3	novel	2705	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTGTCTTGTCTGGTTTA	8854	False	NA	16	True	AATAAA	-19	NA	164664932	164668791	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_+_164664900_164668800
m54284U_201217_021426/108134421/ccs	chr2	-	179	1	Intergenic	novelGene_1143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	154320496	154320317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_154320300_154320500
m54284U_201217_021426/10813528/ccs	chr9	-	184	1	Intergenic	novelGene_4840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATTGTTTTAAGGG	9481	False	NA	NA	False	NA	NA	NA	61955678	61955494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_61955500_61955700
m54284U_201217_021426/10814727/ccs	chr11	+	216	1	Intergenic	novelGene_5718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCTTTGGTAGCACA	NA	False	NA	NA	False	TTTAAA	-13	NA	20135252	20135468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_20135300_20135500
m54284U_201217_021426/108266529/ccs	chr16	-	168	1	Intergenic	novelGene_8317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAAAATATATATATT	NA	False	NA	NA	False	NA	NA	NA	90097269	90097101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_90097100_90097300
m54284U_201217_021426/108268203/ccs	chr13	-	180	1	Intergenic	novelGene_7307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTTCAAGTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	112661846	112661666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_112661700_112661800
m54284U_201217_021426/108331219/ccs	chr6	-	175	1	Intergenic	novelGene_3490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGGAAAAAAAAGGGAGAA	NA	False	NA	NA	False	NA	NA	NA	122786294	122786119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122786100_122786300
m54284U_201217_021426/108331382/ccs	chr19	-	192	1	Intergenic	novelGene_9098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGGGGACAAGGAGCTT	9630	False	NA	NA	False	NA	NA	NA	5447908	5447716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5447700_5447900
m54284U_201217_021426/108333773/ccschrUn	chrUn_JH584304v1	-	2210	8	Intergenic	novelGene_9776	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_7	324.47735055071	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTGTTGTCCTGGGCTCT	NA	False	NA	-3	True	AGTAAA	-19	NA	61455	53134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_53770_54335_54480_54720_54868_55111_55702_56985_57152_58563_58836_59591_59774_61381
m54284U_201217_021426/108396692/ccs	chr7	+	199	1	Intergenic	novelGene_3699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGCAGTCTGAGGCGGGG	NA	False	NA	NA	False	NA	NA	NA	24162887	24163086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_24162900_24163100
m54284U_201217_021426/108399012/ccs	chr1	+	181	1	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGCCATGGTGGCGCC	NA	False	NA	NA	False	NA	NA	NA	36972223	36972404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36972200_36972400
m54284U_201217_021426/108528476/ccs	chr5	-	242	1	Intergenic	novelGene_2625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTATTTAAACAAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	76794784	76794542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_76794500_76794800
m54284U_201217_021426/108529819/ccs	chr19	+	5458	32	NNC	ENSMUSG00000024795.12	novel	5423	32	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_1	60.099899491052	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAAGGCTCTTAAACT	NA	False	NA	13	True	AATAAA	-24	NA	34899760	34953145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_+_34899838_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
m54284U_201217_021426/108658804/ccs	chr5	+	184	1	Intergenic	novelGene_2520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	31389228	31389412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_31389200_31389400
m54284U_201217_021426/108659375/ccs	chr15	-	219	1	Intergenic	novelGene_7759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTGTTTTAAATTGT	NA	False	NA	NA	False	AAAACA	-23	NA	73520240	73520021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_73520000_73520200
m54284U_201217_021426/108660099/ccs	chr5	+	174	1	Intergenic	novelGene_2568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAGCCAAA	NA	False	NA	NA	False	NA	NA	NA	38820449	38820623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_38820400_38820600
m54284U_201217_021426/108724599/ccs	chr10	-	169	1	Intergenic	novelGene_5579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	120692615	120692446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_120692400_120692600
m54284U_201217_021426/108791854/ccs	chr19	-	212	1	Intergenic	novelGene_9093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGTTCCCCCCACCCCC	4205	False	NA	NA	False	AAAACA	-6	NA	4924045	4923833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4923800_4924000
m54284U_201217_021426/10879689/ccs	chr6	-	3966	1	Intergenic	novelGene_3240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCAAAATACCAAGCATGAA	NA	False	NA	NA	False	AATAAA	-19	NA	47162238	47158272	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47158300_47162200
m54284U_201217_021426/10879964/ccs	chr10	+	197	1	Intergenic	novelGene_5329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTTGCTTAGAAACTA	NA	False	NA	NA	False	NA	NA	NA	61162031	61162228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61162000_61162200
m54284U_201217_021426/10880302/ccs	chr4	+	1701	1	NIC	ENSMUSG00000028796.18	novel	3949	15	NA	NA	58	-49167	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAAATCAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	128548588	128550289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_128548600_128550300
m54284U_201217_021426/10881218/ccs	chr5	-	190	1	Intergenic	novelGene_2988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCCACCTAGGACCTA	NA	False	NA	NA	False	NA	NA	NA	135988054	135987864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135987900_135988100
m54284U_201217_021426/108855892/ccs	chr13	+	193	1	Intergenic	novelGene_7099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGTATACAGTTTGAT	NA	False	NA	NA	False	NA	NA	NA	55433029	55433222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55433000_55433200
m54284U_201217_021426/109118958/ccs	chr13	-	209	1	Intergenic	novelGene_7012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGATCATGAAATTTG	NA	False	NA	NA	False	NA	NA	NA	32559384	32559175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_32559200_32559400
m54284U_201217_021426/109120004/ccs	chr19	-	191	1	Intergenic	novelGene_9222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAGAAAGAAAGGAATGG	6298	False	NA	NA	False	NA	NA	NA	32751078	32750887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_32750900_32751100
m54284U_201217_021426/109250660/ccs	chr9	+	2065	1	Antisense	novelGene_ENSMUSG00000032580.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCTAACAATCTAGCTA	682	False	NA	NA	False	NA	NA	NA	107635816	107637881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_107635800_107637900
m54284U_201217_021426/109315528/ccs	chr3	-	286	1	Intergenic	novelGene_1419	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTCTTGAACTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	62066911	62066625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_62066600_62066900
m54284U_201217_021426/109446166/ccs	chr6	-	200	1	Intergenic	novelGene_3195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGATGATTTTTGTATTT	8740	False	NA	NA	False	AATAAA	-18	NA	38299525	38299325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38299300_38299500
m54284U_201217_021426/10946335/ccs	chr19	-	174	1	Intergenic	novelGene_9169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAGTTATTATA	NA	False	NA	NA	False	NA	NA	NA	16824762	16824588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_16824600_16824800
m54284U_201217_021426/10946737/ccs	chr9	+	182	1	Intergenic	novelGene_5112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACATATCTCAGAAGAAT	3432	False	NA	NA	False	NA	NA	NA	110384377	110384559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_110384400_110384600
m54284U_201217_021426/10946955/ccs	chr10	-	183	1	Intergenic	novelGene_5238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTTTTAAATTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	25751733	25751550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_25751600_25751700
m54284U_201217_021426/109510764/ccs	chr19	+	152	1	Intergenic	novelGene_9120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAGGAAGGAAGGAA	NA	False	NA	6	True	AATAAA	-10	NA	6261405	6261557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6261400_6261600
m54284U_201217_021426/109578424/ccs	chr3	-	181	1	Intergenic	novelGene_1680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	129453064	129452883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_129452900_129453100
m54284U_201217_021426/109579039/ccs	chr11	-	190	1	Intergenic	novelGene_6016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTCTCTGTGAATGAC	NA	False	NA	NA	False	NA	NA	NA	75606443	75606253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75606300_75606400
m54284U_201217_021426/109579048/ccs	chr13	-	169	1	Intergenic	novelGene_7260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAGTATCTAA	NA	False	NA	NA	False	NA	NA	NA	97268282	97268113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_97268100_97268300
m54284U_201217_021426/109643193/ccs	chr1	-	597	1	Antisense	novelGene_ENSMUSG00000048000.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87371332	87370735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_87370700_87371300
m54284U_201217_021426/109643558/ccs	chr4	-	179	1	Intergenic	novelGene_2315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	259	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAGAAAGAGCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	141893265	141893086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_141893100_141893300
m54284U_201217_021426/109709869/ccs	chr11	-	215	1	Intergenic	novelGene_6207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGAGTTTTCACCAGG	9767	False	NA	NA	False	NA	NA	NA	93876740	93876525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_93876500_93876700
m54284U_201217_021426/109710019/ccs	chr10	-	200	1	Intergenic	novelGene_5637	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGGCCACCAAGATTGA	8448	False	NA	NA	False	NA	NA	NA	128575330	128575130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128575100_128575300
m54284U_201217_021426/109775572/ccs	chr18	-	195	1	Intergenic	novelGene_8873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGAGATGAACGTTTC	NA	False	NA	NA	False	NA	NA	NA	34807241	34807046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34807000_34807200
m54284U_201217_021426/109840869/ccs	chr5	+	185	1	ISM	ENSMUSG00000029470.16	ENSMUST00000132062.2	513	2	75	351	75	-351	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTATAAAAAAGAACTTC	NA	False	NA	NA	False	NA	NA	NA	122862792	122862977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_122862800_122863000
m54284U_201217_021426/109904132/ccs	chr6	-	184	1	Intergenic	novelGene_3581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTGTTTTCTGTG	NA	False	NA	NA	False	NA	NA	NA	148660428	148660244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148660200_148660400
m54284U_201217_021426/109906730/ccs	chr19	-	150	1	Intergenic	novelGene_9243	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAACACTTAACTTTAT	3060	False	NA	NA	False	NA	NA	NA	38322932	38322782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_38322800_38322900
m54284U_201217_021426/110036790/ccs	chr2	-	1692	1	Antisense	novelGene_ENSMUSG00000039849.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAGAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	164721705	164720013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_164720000_164721700
m54284U_201217_021426/110101236/ccs	chr9	+	188	1	Intergenic	novelGene_4785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTTAATTTTGACTTAA	9560	False	NA	NA	False	NA	NA	NA	55159626	55159814	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_55159600_55159800
m54284U_201217_021426/110102450/ccs	chr17	-	183	1	Intergenic	novelGene_8618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGAAAAGTGGAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	47021926	47021743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_47021700_47021900
m54284U_201217_021426/11010677/ccs	chr5	-	194	1	Intergenic	novelGene_3024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTAGAAGATATCCCAC	NA	False	NA	NA	False	NA	NA	NA	140542279	140542085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_140542100_140542300
m54284U_201217_021426/110166543/ccs	chr7	-	185	1	Intergenic	novelGene_3794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGATTTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	35334617	35334432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_35334400_35334600
m54284U_201217_021426/110166760/ccs	chr19	+	1868	1	Intergenic	novelGene_9167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAAACTGTAAGAAACA	NA	False	NA	NA	False	CATAAA	-40	NA	12767675	12769543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_12767700_12769500
m54284U_201217_021426/110167314/ccs	chr19	+	156	1	Intergenic	novelGene_9287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTAATGCTGTTTTC	675	False	NA	NA	False	NA	NA	NA	45056394	45056550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_45056400_45056600
m54284U_201217_021426/110168174/ccs	chr10	+	205	1	Intergenic	novelGene_5217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGCTGAGCACAGAAGC	NA	False	NA	NA	False	NA	NA	NA	20007247	20007452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_20007200_20007500
m54284U_201217_021426/110232966/ccs	chr9	-	177	1	Intergenic	novelGene_5034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	9241	False	NA	NA	False	NA	NA	NA	99490257	99490080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_99490100_99490300
m54284U_201217_021426/110233218/ccs	chr2	+	3062	8	NNC	ENSMUSG00000027405.17	novel	1877	12	NA	NA	0	0	intron_retention	FALSE	canonical	2	75	junction_7	838.880692546044	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATTTTGTTTATTG	NA	False	NA	31	True	AATAAA	-20	NA	130116365	130121233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130119545_130119768_130119891_130120079
m54284U_201217_021426/110234187/ccs	chr17	+	201	1	Intergenic	novelGene_8780	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGAACCCTGGGCCCTCT	NA	False	NA	NA	False	NA	NA	NA	88398918	88399119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_88398900_88399100
m54284U_201217_021426/110299043/ccs	chr7	-	169	1	Intergenic	novelGene_3898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAGGAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	75521966	75521797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_75521800_75522000
m54284U_201217_021426/110299391/ccs	chr1	+	180	1	Intergenic	novelGene_516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGACAGGAATCTTAAC	NA	False	NA	NA	False	NA	NA	NA	180680940	180681120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_180680900_180681100
m54284U_201217_021426/110494417/ccs	chr19	-	154	1	Intergenic	novelGene_9116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTATTTTTTTTTAAAA	1937	False	NA	NA	False	NA	NA	NA	6139476	6139322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_6139300_6139500
m54284U_201217_021426/110625413/ccs	chr6	+	166	1	Intergenic	novelGene_3395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	94165587	94165753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_94165600_94165800
m54284U_201217_021426/110690409/ccs	chr6	-	193	2	Intergenic	novelGene_3226	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	52	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTGTCAAACTAGGCTT	NA	False	NA	NA	False	NA	NA	NA	39742488	39490925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39491070_39742439
m54284U_201217_021426/110690614/ccs	chrX	-	196	1	Intergenic	novelGene_9559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTATTTATATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	100535813	100535617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_100535600_100535800
m54284U_201217_021426/110692693/ccs	chr18	+	182	1	Intergenic	novelGene_8937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTTATCCCCTTGTTTC	3596	False	NA	NA	False	NA	NA	NA	42557006	42557188	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_42557000_42557200
m54284U_201217_021426/110757813/ccs	chr17	-	974	1	FSM	ENSMUSG00000051639.4	ENSMUST00000061073.2	957	1	130	-147	130	147	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATCCTAGCTGCCTGGA	NA	False	NA	NA	False	NA	NA	NA	6172309	6171335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_6171300_6172300
m54284U_201217_021426/11077656/ccs	chr18	-	235	1	Intergenic	novelGene_8942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTTTAAAAGTTGTGTC	NA	False	NA	NA	False	NA	NA	NA	42980878	42980643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_42980600_42980900
m54284U_201217_021426/110888567/ccs	chr17	-	280	1	Intergenic	novelGene_8557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCATGACCAGCCAGGCGT	NA	False	NA	NA	False	NA	NA	NA	35656308	35656028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35656000_35656300
m54284U_201217_021426/110954014/ccs	chr3	-	4072	1	FSM	ENSMUSG00000037531.9	ENSMUST00000192021.2	1505	1	849	-3416	391	3416	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCTCTAACTAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	32790905	32786833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32786800_32790900
m54284U_201217_021426/111018173/ccs	chr3	+	1929	8	NNC	ENSMUSG00000027940.19	novel	2230	8	NA	NA	0	-292	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_6	1170.69368935077	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTTTGAAGTTTTGTT	NA	False	NA	9	True	TTTAAA	-6	NA	89986846	90007911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997320_89997387_90006834
m54284U_201217_021426/111149081/ccs	chr17	-	183	1	Intergenic	novelGene_8535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAATTGTCTCTATGGT	9834	False	NA	NA	False	NA	NA	NA	33941963	33941780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_33941800_33942000
m54284U_201217_021426/111149232/ccs	chr7	-	333	1	Intergenic	novelGene_3767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAACCAAACAAAAAACCAG	NA	False	NA	NA	False	NA	NA	NA	29689310	29688977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29689000_29689300
m54284U_201217_021426/111151633/ccs	chr7	-	204	1	Intergenic	novelGene_3900	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	79059561	79059357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79059400_79059600
m54284U_201217_021426/111215784/ccs	chrX	-	195	1	Intergenic	novelGene_9526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACAAAGAGCCGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	91051023	91050828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_91050800_91051000
m54284U_201217_021426/111348197/ccs	chr6	+	183	1	Intergenic	novelGene_3359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTAAGAAGAGAGAATT	NA	False	NA	NA	False	NA	NA	NA	85948994	85949177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_85949000_85949200
m54284U_201217_021426/11142863/ccs	chr10	-	192	1	Intergenic	novelGene_5577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAAGCCCCTCAG	NA	False	NA	NA	False	NA	NA	NA	120447570	120447378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_120447400_120447600
m54284U_201217_021426/111477427/ccs	chr14	+	194	2	Antisense	novelGene_ENSMUSG00000021796.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	37	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTGTTACAGCTACAGAAT	NA	False	NA	NA	False	NA	NA	NA	34204633	34217231	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_34204684_34217087
m54284U_201217_021426/111477483/ccs	chr1	-	1339	1	Antisense	novelGene_ENSMUSG00000037461.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAGAAAAAAA	6366	False	NA	NA	False	NA	NA	NA	191356751	191355412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_191355400_191356800
m54284U_201217_021426/111542518/ccs	chr7	-	195	1	Intergenic	novelGene_4049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGTGCTTTAGAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	117781421	117781226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_117781200_117781400
m54284U_201217_021426/111608192/ccs	chr2	+	182	1	Intergenic	novelGene_995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATTTAAAAAA	229	False	NA	NA	False	NA	NA	NA	118773002	118773184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_118773000_118773200
m54284U_201217_021426/111610041/ccs	chr17	+	175	1	Intergenic	novelGene_8409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTCTTCTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	24517090	24517265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_24517100_24517300
m54284U_201217_021426/111610590/ccs	chr3	-	185	1	Intergenic	novelGene_1535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAAAAAGAAAACACCAGG	8683	False	NA	NA	False	NA	NA	NA	90000614	90000429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90000400_90000600
m54284U_201217_021426/1116538/ccs	chr19	-	184	1	Intergenic	novelGene_9191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGTATTAAAAAAATGAAAT	NA	False	NA	NA	False	NA	NA	NA	24921206	24921022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_24921000_24921200
m54284U_201217_021426/111673948/ccs	chr11	+	1520	1	NIC	ENSMUSG00000017774.20	novel	4547	32	NA	NA	24	-4595	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCACCAAAAAAAAAA	8867	False	NA	NA	False	NA	NA	NA	75542359	75543879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_75542400_75543900
m54284U_201217_021426/111674889/ccs	chr17	-	961	1	Genic_Genomic	ENSMUSG00000024026.14_ENSMUSG00000099474.2	novel	NA	NA	NA	NA	-285	-3789	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTATTTATTTATTTAT	NA	False	NA	NA	False	NA	NA	NA	30846164	30845203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr17_-_30845200_30846200
m54284U_201217_021426/111871807/ccs	chr18	-	3009	1	NIC	ENSMUSG00000024622.9	novel	5103	21	NA	NA	0	-6251	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	5824	False	NA	NA	False	NA	NA	NA	61310122	61307113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_61307100_61310100
m54284U_201217_021426/111937881/ccs	chr1	-	185	1	Intergenic	novelGene_174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTGAAGAAACTGGGTAAC	7085	False	NA	NA	False	NA	NA	NA	72194235	72194050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_72194000_72194200
m54284U_201217_021426/112002038/ccs	chrX	-	177	1	Intergenic	novelGene_9407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAATACACTACTGTA	6721	False	NA	NA	False	NA	NA	NA	20574631	20574454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_20574500_20574600
m54284U_201217_021426/112002695/ccs	chr12	-	182	1	Intergenic	novelGene_6725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCAGCATTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	75778975	75778793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_75778800_75779000
m54284U_201217_021426/112003215/ccs	chr15	+	177	1	Intergenic	novelGene_7885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATGTGACTACAAAAG	NA	False	NA	NA	False	NA	NA	NA	84793103	84793280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_84793100_84793300
m54284U_201217_021426/112003498/ccs	chr19	+	3725	1	Genic_Genomic	ENSMUSG00000024900.6	novel	NA	NA	NA	NA	7928	2263	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGATGGCACAGGAT	NA	False	NA	NA	False	AATAAA	-16	NA	3434271	3437996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_+_3434300_3438000
m54284U_201217_021426/11206687/ccs	chr4	-	194	1	Intergenic	novelGene_1987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATGAAGGCCCAA	8299	False	NA	NA	False	NA	NA	NA	108063348	108063154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108063200_108063300
m54284U_201217_021426/11207533/ccs	chr4	-	216	1	Intergenic	novelGene_1914	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTGACCTCTGTAA	6524	False	NA	NA	False	TTTAAA	-8	NA	83259535	83259319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_83259300_83259500
m54284U_201217_021426/11208034/ccs	chrX	-	198	1	Intergenic	novelGene_9450	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTTCTCTAAGACAAAG	NA	False	NA	NA	False	NA	NA	NA	47673131	47672933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_47672900_47673100
m54284U_201217_021426/11208203/ccs	chr13	-	197	1	Intergenic	novelGene_7141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCATTTGGAGTTAATTT	NA	False	NA	NA	False	NA	NA	NA	62524605	62524408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_62524400_62524600
m54284U_201217_021426/11208845/ccs	chr16	-	195	1	Intergenic	novelGene_8038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACATGGCTACCTACC	NA	False	NA	NA	False	NA	NA	NA	5299618	5299423	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_5299400_5299600
m54284U_201217_021426/112132583/ccs	chr16	+	185	1	Intergenic	novelGene_8073	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACCAGACATACACATA	NA	False	NA	NA	False	NA	NA	NA	13562811	13562996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_13562800_13563000
m54284U_201217_021426/112133741/ccs	chr13	-	4064	1	NIC	ENSMUSG00000021306.12	novel	2971	7	NA	NA	6122	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTCAACTGGTGCTGGA	2262	False	NA	NA	False	AATAAA	-19	NA	13536268	13532204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_13532200_13536300
m54284U_201217_021426/112134477/ccs	chr3	-	160	1	Intergenic	novelGene_1543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCCACCTTGTATTTT	9458	False	NA	NA	False	NA	NA	NA	90380511	90380351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90380400_90380500
m54284U_201217_021426/112198792/ccs	chr11	+	167	1	Intergenic	novelGene_6289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGAGAGAGAGAGAG	3249	False	NA	NA	False	NA	NA	NA	97778637	97778804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97778600_97778800
m54284U_201217_021426/112264639/ccs	chr19	-	193	1	NIC	ENSMUSG00000054611.18	novel	1128	4	NA	NA	8315	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	1822	False	NA	NA	False	NA	NA	NA	4438630	4438437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4438400_4438600
m54284U_201217_021426/112329044/ccs	chr9	-	196	1	Intergenic	novelGene_5116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAACTCCTTAGCAGA	2432	False	NA	NA	False	NA	NA	NA	110642909	110642713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_110642700_110642900
m54284U_201217_021426/112331599/ccs	chr18	+	186	1	Intergenic	novelGene_8960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGATAAAAGTGGACTCA	NA	False	NA	NA	False	NA	NA	NA	53956898	53957084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_53956900_53957100
m54284U_201217_021426/112460043/ccs	chr2	+	173	1	Intergenic	novelGene_1023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATATATATATTTAATAA	NA	False	NA	NA	False	NA	NA	NA	121219298	121219471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121219300_121219500
m54284U_201217_021426/112462389/ccs	chr5	-	184	1	Intergenic	novelGene_2887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACATTGTGATTAACTC	7583	False	NA	NA	False	NA	NA	NA	123676751	123676567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123676600_123676800
m54284U_201217_021426/112462539/ccs	chr5	-	197	1	Intergenic	novelGene_2642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTATCCTTTTAGTC	NA	False	NA	NA	False	NA	NA	NA	80851216	80851019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_80851000_80851200
m54284U_201217_021426/11274186/ccs	chr3	-	184	1	Intergenic	novelGene_1514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACAGAAAGAGAAGCT	NA	False	NA	NA	False	NA	NA	NA	89063125	89062941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89062900_89063100
m54284U_201217_021426/112788005/ccs	chr10	-	210	1	Intergenic	novelGene_5453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGGAGAGATGGCTCAG	5470	False	NA	NA	False	NA	NA	NA	80696491	80696281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_80696300_80696500
m54284U_201217_021426/112789930/ccs	chr7	-	191	1	Intergenic	novelGene_3641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTATCTTTCTCTACCC	NA	False	NA	NA	False	NA	NA	NA	6372384	6372193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_6372200_6372400
m54284U_201217_021426/112855427/ccs	chr15	-	174	1	Intergenic	novelGene_7732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGGAAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	58737503	58737329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_58737300_58737500
m54284U_201217_021426/112919829/ccs	chr8	-	177	1	Intergenic	novelGene_4507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAGATATGTTAT	NA	False	NA	NA	False	NA	NA	NA	112035663	112035486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_112035500_112035700
m54284U_201217_021426/112921378/ccs	chr9	-	210	1	Intergenic	novelGene_4949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTTTGAAATCCAACATC	NA	False	NA	NA	False	TTTAAA	-5	NA	75339285	75339075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_75339100_75339300
m54284U_201217_021426/112984744/ccs	chr5	-	2474	16	NNC	ENSMUSG00000062604.12	novel	4259	15	NA	NA	0	-1833	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	92.2122190023282	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTGTGTTGTGTGA	NA	False	NA	-6	True	NA	NA	NA	23881012	23712282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_23712719_23718487_23718581_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
m54284U_201217_021426/113116606/ccs	chr8	-	5085	13	NIC	ENSMUSG00000036180.16	novel	3812	13	NA	NA	-130	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_6	323.390458871144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCAACTGTATTGTTC	NA	False	NA	-9	True	AATAAA	-11	NA	70427051	70359725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
m54284U_201217_021426/113181648/ccs	chr7	-	4072	1	FSM	ENSMUSG00000096916.8	ENSMUST00000099111.4	941	1	-2748	-383	-2748	381	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATAGCAGAGTTGTCTT	NA	False	NA	NA	False	NA	NA	NA	27687969	27683897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_27683900_27688000
m54284U_201217_021426/113247785/ccs	chr7	-	232	1	Intergenic	novelGene_4103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGTCCCAAACTCAGGTAG	NA	False	NA	NA	False	NA	NA	NA	127319647	127319415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127319400_127319600
m54284U_201217_021426/113312165/ccs	chr15	-	164	1	Intergenic	novelGene_7887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAGAAAAAAAGAATGAGT	NA	False	NA	NA	False	NA	NA	NA	85088758	85088594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_85088600_85088800
m54284U_201217_021426/113377290/ccs	chr15	+	232	1	Intergenic	novelGene_7748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATGAGTAAGCTGTGAC	NA	False	NA	NA	False	NA	NA	NA	72725079	72725311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_72725100_72725300
m54284U_201217_021426/113379301/ccs	chr8	-	201	1	Intergenic	novelGene_4437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCATAGCTTTAGTTTTC	4588	False	NA	NA	False	AAGAAA	-3	NA	105961543	105961342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_105961300_105961500
m54284U_201217_021426/11339065/ccs	chr11	+	175	1	Intergenic	novelGene_5807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGGGCTGGAGAGATGGT	NA	False	NA	NA	False	NA	NA	NA	51501004	51501179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_51501000_51501200
m54284U_201217_021426/113445206/ccs	chr16	-	6985	1	NIC	ENSMUSG00000022890.14	novel	742	6	NA	NA	-23	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTCCTTTAAATTCT	NA	False	NA	-2	True	AATAAA	-18	NA	84631743	84624758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_84624800_84631700
m54284U_201217_021426/113574169/ccs	chr11	-	180	1	Intergenic	novelGene_6015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCACGTGCTGTTGCTCCTC	6366	False	NA	NA	False	NA	NA	NA	75588432	75588252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75588300_75588400
m54284U_201217_021426/113575627/ccs	chr13	+	4184	1	FSM	ENSMUSG00000113461.2	ENSMUST00000221726.2	239	1	-1592	-2353	-1592	2353	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATGTTTCATTAATTC	NA	False	NA	NA	False	NA	NA	NA	65799725	65803909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_65799700_65803900
m54284U_201217_021426/113575781/ccs	chrX	-	177	1	Intergenic	novelGene_9712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTAAAAAGAAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	160396132	160395955	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_160396000_160396100
m54284U_201217_021426/113641607/ccs	chr15	-	200	1	Intergenic	novelGene_7684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	37106163	37105963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_37106000_37106200
m54284U_201217_021426/113705197/ccs	chr4	+	188	1	Intergenic	novelGene_2012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTGTGTATCAAA	NA	False	NA	NA	False	NA	NA	NA	116053027	116053215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116053000_116053200
m54284U_201217_021426/113707030/ccs	chr2	+	196	1	Intergenic	novelGene_1030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTAAAAAAAAATAATCTCA	NA	False	NA	NA	False	NA	NA	NA	121560401	121560597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121560400_121560600
m54284U_201217_021426/113770668/ccs	chr4	+	176	1	Intergenic	novelGene_2105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAAGGGGAGGCCAACC	446	False	NA	NA	False	NA	NA	NA	124799301	124799477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_124799300_124799500
m54284U_201217_021426/113772974/ccs	chr5	+	173	1	Intergenic	novelGene_2559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAAGGAAGAGAGGGAG	NA	False	NA	NA	False	NA	NA	NA	36690686	36690859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_36690700_36690900
m54284U_201217_021426/113836105/ccs	chr13	-	215	1	Intergenic	novelGene_7154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTTTTGCCGAGTCAC	NA	False	NA	NA	False	NA	NA	NA	63516918	63516703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_63516700_63516900
m54284U_201217_021426/113836665/ccs	chrX	-	186	1	Intergenic	novelGene_9575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATGTTAAATACTTT	5498	False	NA	NA	False	NA	NA	NA	101268454	101268268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_101268300_101268500
m54284U_201217_021426/113838685/ccs	chr13	+	175	1	Intergenic	novelGene_7276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	100556848	100557023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_100556800_100557000
m54284U_201217_021426/113901714/ccs	chr13	-	180	1	Intergenic	novelGene_7047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAACCAGCTGCTGA	NA	False	NA	NA	False	NA	NA	NA	44907515	44907335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_44907300_44907500
m54284U_201217_021426/113901901/ccs	chr4	-	187	1	Antisense	novelGene_ENSMUSG00000103119.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATATTTTATTTGAGCA	NA	False	NA	NA	False	NA	NA	NA	136368921	136368734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_136368700_136368900
m54284U_201217_021426/113969648/ccs	chr15	+	187	1	Intergenic	novelGene_7819	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTTTGTGGCACACTT	NA	False	NA	NA	False	NA	NA	NA	79807119	79807306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_79807100_79807300
m54284U_201217_021426/114033220/ccs	chr1	-	2766	13	NIC	ENSMUSG00000026019.16	novel	2850	14	NA	NA	0	-1275	intron_retention	FALSE	canonical	3	160	junction_12	227.591541411851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGTTGGGTCTTGTC	NA	False	NA	-22	True	AATGAA	-15	NA	60137305	60117301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
m54284U_201217_021426/114033654/ccs	chr10	-	1686	1	Genic_Genomic	ENSMUSG00000020091.16	novel	NA	NA	NA	NA	-122	-18278	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGCAAACATCTAGGAG	NA	False	NA	NA	False	NA	NA	NA	61288562	61286876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_-_61286900_61288600
m54284U_201217_021426/11403970/ccs	chr9	+	193	1	Intergenic	novelGene_4783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAAAGTAAGAGTTG	NA	False	NA	NA	False	NA	NA	NA	55135821	55136014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_55135800_55136000
m54284U_201217_021426/114098193/ccs	chr17	-	176	1	Intergenic	novelGene_8713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	NA	False	NA	-2	True	NA	NA	NA	71870464	71870288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71870300_71870500
m54284U_201217_021426/114100426/ccs	chr7	-	161	1	Intergenic	novelGene_3986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAATCAAGGTGGGCAAA	NA	False	NA	NA	False	NA	NA	NA	101276518	101276357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_101276400_101276500
m54284U_201217_021426/114229746/ccs	chr4	+	177	1	Intergenic	novelGene_2327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGACTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	145078039	145078216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_145078000_145078200
m54284U_201217_021426/114231922/ccs	chr1	-	178	1	Intergenic	novelGene_294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTATGTCCCCAGTATA	NA	False	NA	NA	False	NA	NA	NA	130116009	130115831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_130115800_130116000
m54284U_201217_021426/114232097/ccs	chr19	-	201	1	Intergenic	novelGene_9261	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATTTTAAAACACTT	1752	False	NA	NA	False	NA	NA	NA	41745852	41745651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_41745700_41745900
m54284U_201217_021426/114295339/ccs	chr7	-	159	1	Intergenic	novelGene_3676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTTGCAAGCTA	7324	False	NA	NA	False	AATAAA	-9	NA	18649400	18649241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_18649200_18649400
m54284U_201217_021426/114362473/ccs	chr6	+	781	1	NIC	ENSMUSG00000046679.17	novel	2523	10	NA	NA	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCATTTCTCGGGTCTCA	1787	False	NA	NA	False	ATTAAA	-1	NA	86415689	86416470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_86415700_86416500
m54284U_201217_021426/114363120/ccs	chr17	-	174	1	Intergenic	novelGene_8716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	71995327	71995153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71995200_71995300
m54284U_201217_021426/114426194/ccs	chr9	+	175	1	Intergenic	novelGene_4712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAACAAACAAACAAA	7331	False	NA	NA	False	NA	NA	NA	37393280	37393455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_37393300_37393500
m54284U_201217_021426/114427631/ccs	chr3	-	261	1	Intergenic	novelGene_1593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGTAATTG	NA	False	NA	NA	False	NA	NA	NA	98993476	98993215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_98993200_98993500
m54284U_201217_021426/114428516/ccs	chr7	-	187	1	Intergenic	novelGene_4019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGGGGGGGCTGGAGAGA	NA	False	NA	NA	False	NA	NA	NA	109707801	109707614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_109707600_109707800
m54284U_201217_021426/114491935/ccs	chr17	+	166	1	Intergenic	novelGene_8698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAAGGTTTTA	3133	False	NA	NA	False	NA	NA	NA	71073788	71073954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71073800_71074000
m54284U_201217_021426/114557259/ccs	chr14	+	186	1	Intergenic	novelGene_7494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCTCAGCTGGGC	NA	False	NA	NA	False	NA	NA	NA	58129456	58129642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_58129500_58129600
m54284U_201217_021426/114559024/ccs	chr4	-	176	1	Intergenic	novelGene_2382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAGAGTTGTT	NA	False	NA	NA	False	NA	NA	NA	149275310	149275134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_149275100_149275300
m54284U_201217_021426/114625170/ccs	chr9	-	1503	1	Antisense	novelGene_ENSMUSG00000032307.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTCCCCAGCACTTAACA	NA	False	NA	NA	False	AATAAA	-15	NA	55057270	55055767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_55055800_55057300
m54284U_201217_021426/114755599/ccs	chr6	-	214	1	Intergenic	novelGene_3342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTGCGGACTGACTGA	NA	False	NA	NA	False	NA	NA	NA	83682268	83682054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_83682100_83682300
m54284U_201217_021426/114819500/ccs	chr7	-	188	1	Intergenic	novelGene_4184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCACCTGGGCACTCCAG	NA	False	NA	NA	False	NA	NA	NA	144758833	144758645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_144758600_144758800
m54284U_201217_021426/114821370/ccs	chr2	-	176	1	Intergenic	novelGene_860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGACTGAGGCGGCTGGTC	NA	False	NA	NA	False	NA	NA	NA	73087470	73087294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_73087300_73087500
m54284U_201217_021426/114950159/ccs	chr4	-	185	1	Intergenic	novelGene_1783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGATGGGCTATGG	6196	False	NA	NA	False	NA	NA	NA	32858412	32858227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_32858200_32858400
m54284U_201217_021426/114950180/ccs	chr7	+	176	1	Intergenic	novelGene_4052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAATTTTTAATT	NA	False	NA	NA	False	NA	NA	NA	117834512	117834688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_117834500_117834700
m54284U_201217_021426/114951987/ccs	chr7	-	189	1	Intergenic	novelGene_3693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGCTTTGAGACAGG	NA	False	NA	NA	False	NA	NA	NA	19525599	19525410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_19525400_19525600
m54284U_201217_021426/115016458/ccs	chrX	+	184	1	Intergenic	novelGene_9550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTAGCATGTTTTCATGT	NA	False	NA	NA	False	NA	NA	NA	99919013	99919197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_99919000_99919200
m54284U_201217_021426/115017072/ccs	chr12	-	174	1	Intergenic	novelGene_6937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAAACAAAGAG	NA	False	NA	NA	False	NA	NA	NA	113911536	113911362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_113911400_113911500
m54284U_201217_021426/115017965/ccs	chr4	+	172	1	Intergenic	novelGene_1792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAAAAGAGAGACTT	NA	False	NA	NA	False	NA	NA	NA	33624260	33624432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_33624300_33624400
m54284U_201217_021426/115018312/ccs	chr15	+	194	1	Intergenic	novelGene_7918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTCTCTTAAAATGTT	NA	False	NA	NA	False	NA	NA	NA	96203674	96203868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_96203700_96203900
m54284U_201217_021426/115280588/ccs	chr8	-	185	1	Intergenic	novelGene_4469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGACCAAAAGCAGGCTG	NA	False	NA	NA	False	NA	NA	NA	107870802	107870617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107870600_107870800
m54284U_201217_021426/115343821/ccs	chr8	-	169	1	Intergenic	novelGene_4231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTGTAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	24727203	24727034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_24727000_24727200
m54284U_201217_021426/11534527/ccs	chr3	-	198	1	Intergenic	novelGene_1554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAATGAATTGATTGG	NA	False	NA	NA	False	NA	NA	NA	94516731	94516533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_94516500_94516700
m54284U_201217_021426/115346194/ccs	chr5	+	206	1	Intergenic	novelGene_3055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGGGGCTGGCTTACAG	7134	False	NA	NA	False	NA	NA	NA	144553020	144553226	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_144553000_144553200
m54284U_201217_021426/11535447/ccs	chr18	-	232	1	Intergenic	novelGene_8987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGGGATTTGAACAGGT	NA	False	NA	NA	False	NA	NA	NA	65522976	65522744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_65522700_65523000
m54284U_201217_021426/115409172/ccs	chr11	+	212	1	Intergenic	novelGene_6128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTCTTAAGTTTTAGA	NA	False	NA	NA	False	NA	NA	NA	83952971	83953183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_83953000_83953200
m54284U_201217_021426/115410241/ccs	chr3	-	167	1	Intergenic	novelGene_1659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	121535846	121535679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_121535700_121535800
m54284U_201217_021426/115475980/ccs	chr13	-	189	1	Intergenic	novelGene_7189	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAAAAGAAGGAGGCCTC	NA	False	NA	NA	False	NA	NA	NA	67433084	67432895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_67432900_67433100
m54284U_201217_021426/115605699/ccs	chr11	-	178	1	Intergenic	novelGene_6404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATATTGATCTCTA	NA	False	NA	NA	False	NA	NA	NA	107000206	107000028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_1.07e+08_107000200
m54284U_201217_021426/115605805/ccs	chr12	+	5022	1	Genic_Genomic	ENSMUSG00000020580.11	novel	NA	NA	NA	NA	-50	-46952	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAAAAATTGTTATAA	1985	False	NA	NA	False	NA	NA	NA	16944845	16949867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_+_16944800_16949900
m54284U_201217_021426/115607259/ccs	chr4	-	190	1	Intergenic	novelGene_1788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGCCAGAGCTACAAAGT	1931	False	NA	NA	False	NA	NA	NA	33170081	33169891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_33169900_33170100
m54284U_201217_021426/115672254/ccs	chr14	-	2092	2	NIC	ENSMUSG00000022223.10	novel	1255	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGGCTTCCGCTGTCTC	NA	False	NA	-6	True	AATAAA	-20	NA	56137715	56134739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_56136763_56137646
m54284U_201217_021426/115737797/ccs	chr7	-	208	1	Intergenic	novelGene_3647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGTGCAAATAATGAAT	NA	False	NA	NA	False	TTTAAA	-8	NA	12177325	12177117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_12177100_12177300
m54284U_201217_021426/115739104/ccs	chr9	-	1881	1	Intergenic	novelGene_5145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGGGGCTGGTGAGAT	7543	False	NA	NA	False	NA	NA	NA	119182874	119180993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_119181000_119182900
m54284U_201217_021426/115804188/ccs	chr6	-	197	1	Intergenic	novelGene_3389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCCAGAGCTGGGTTTC	9725	False	NA	NA	False	NA	NA	NA	91797715	91797518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_91797500_91797700
m54284U_201217_021426/115804489/ccs	chr5	+	240	1	Intergenic	novelGene_2961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCAAACTTGAGGCAGGT	NA	False	NA	NA	False	NA	NA	NA	134356578	134356818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_134356600_134356800
m54284U_201217_021426/115933742/ccs	chr10	-	189	1	Intergenic	novelGene_5271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAGTTTACTTCTCTAG	NA	False	NA	NA	False	NA	NA	NA	40145238	40145049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_40145000_40145200
m54284U_201217_021426/116000226/ccs	chr5	+	230	1	Intergenic	novelGene_2770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACTCAGCAAGCCATGG	NA	False	NA	NA	False	NA	NA	NA	110778939	110779169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110778900_110779200
m54284U_201217_021426/11602423/ccs	chr7	-	193	1	Intergenic	novelGene_3892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAAGAAAATTATA	8402	False	NA	NA	False	NA	NA	NA	73302548	73302355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_73302400_73302500
m54284U_201217_021426/116131097/ccs	chr5	-	168	1	Intergenic	novelGene_2976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGAAGCCAGCAAGTC	7847	False	NA	NA	False	NA	NA	NA	135386681	135386513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135386500_135386700
m54284U_201217_021426/116195985/ccs	chr3	+	4813	1	Intergenic	novelGene_1451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAACGATCCAA	NA	False	NA	NA	False	NA	NA	NA	84057571	84062384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_84057600_84062400
m54284U_201217_021426/116197846/ccs	chr5	+	160	1	Intergenic	novelGene_3002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATTTTATTTAGTAT	781	False	NA	NA	False	NA	NA	NA	137602853	137603013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137602900_137603000
m54284U_201217_021426/116260984/ccs	chr12	-	181	1	Intergenic	novelGene_6891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	110160405	110160224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_110160200_110160400
m54284U_201217_021426/116327194/ccs	chr9	+	177	1	Intergenic	novelGene_5027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGACCAAATAT	NA	False	NA	NA	False	NA	NA	NA	98826157	98826334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_98826200_98826300
m54284U_201217_021426/116329218/ccs	chr4	+	217	1	Intergenic	novelGene_1847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGTTGTCACAAACCCC	NA	False	NA	NA	False	NA	NA	NA	45533244	45533461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_45533200_45533500
m54284U_201217_021426/116329250/ccs	chr4	-	152	1	Intergenic	novelGene_1992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACATATAATAAATAATAAA	NA	False	NA	NA	False	NA	NA	NA	108163945	108163793	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108163800_108163900
m54284U_201217_021426/116392147/ccs	chr10	+	176	1	Intergenic	novelGene_5287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTTTTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	44005427	44005603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_44005400_44005600
m54284U_201217_021426/116524469/ccs	chr9	-	174	1	Intergenic	novelGene_4694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAGTTTTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	31355243	31355069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_31355100_31355200
m54284U_201217_021426/116525394/ccs	chr10	-	1778	1	Genic_Genomic	ENSMUSG00000097134.3	novel	NA	NA	NA	NA	3771	298	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTATTCTATTTCTT	NA	False	NA	-3	True	AATAAA	-16	NA	66749747	66747969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_-_66748000_66749700
m54284U_201217_021426/116588710/ccs	chr7	-	192	1	Intergenic	novelGene_3669	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTTCTAGGTGTTGGAA	NA	False	NA	NA	False	NA	NA	NA	16084797	16084605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_16084600_16084800
m54284U_201217_021426/116589006/ccs	chr7	-	184	1	Intergenic	novelGene_3625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAGAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	3851716	3851532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3851500_3851700
m54284U_201217_021426/116590116/ccs	chr12	+	202	1	Intergenic	novelGene_6706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGAGCTTTTCAAACC	NA	False	NA	NA	False	NA	NA	NA	71269323	71269525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_71269300_71269500
m54284U_201217_021426/11665425/ccs	chr8	+	185	1	Intergenic	novelGene_4223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCAGTGGTGGTGCACG	NA	False	NA	NA	False	NA	NA	NA	22651045	22651230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_22651000_22651200
m54284U_201217_021426/116656860/ccs	chr6	-	196	1	Intergenic	novelGene_3457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGATGCTCAATTTGACA	NA	False	NA	NA	False	NA	NA	NA	120336831	120336635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120336600_120336800
m54284U_201217_021426/116850825/ccs	chr13	-	1509	1	FSM	ENSMUSG00000061724.6	ENSMUST00000074863.6	733	1	-71	-705	-71	705	mono-exon	FALSE	NA	NA	NA	NA	NA	1489	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGCCTACCTCCAATAG	NA	False	NA	NA	False	AATAAA	-40	NA	13407549	13406040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_13406000_13407500
m54284U_201217_021426/116851728/ccs	chr15	-	3935	11	NIC	ENSMUSG00000075600.4	novel	3362	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	58	junction_7	46.0005434750504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCTGTCTTGACTACC	NA	False	NA	-1	True	AATAAA	-19	NA	75713764	75626278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_75626800_75628471_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
m54284U_201217_021426/117178899/ccs	chr11	-	187	1	Intergenic	novelGene_5836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACAATAAGAGTAAAA	NA	False	NA	NA	False	NA	NA	NA	53375761	53375574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_53375600_53375800
m54284U_201217_021426/117180233/ccs	chr4	-	258	1	Intergenic	novelGene_2071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACTCCCAACTTTTCAT	NA	False	NA	NA	False	NA	NA	NA	120368971	120368713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_120368700_120369000
m54284U_201217_021426/117244145/ccs	chr11	-	3189	1	NIC	ENSMUSG00000034120.19	novel	1899	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAATGTGTCCTGGTCTTT	6003	False	NA	-10	True	ATTAAA	-26	NA	116743920	116740731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_116740700_116743900
m54284U_201217_021426/117309555/ccs	chrX	-	6359	9	NIC	ENSMUSG00000031229.17	novel	10275	35	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	87.0142768458142	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTTGAAGCATTTAAT	NA	False	NA	-1	True	AATAAA	-16	NA	104973009	104909151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_104911530_104918165_104921180_104921972_104922041_104923514_104923622_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972564
m54284U_201217_021426/117310285/ccs	chr2	-	209	1	Intergenic	novelGene_1229	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	1775	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGACAAACCGTGGTAGT	NA	False	NA	NA	False	NA	NA	NA	165758383	165758174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_165758200_165758400
m54284U_201217_021426/117311813/ccs	chr9	-	185	1	Intergenic	novelGene_4792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTTTTAAAAGAAACA	NA	False	NA	NA	False	NA	NA	NA	56909515	56909330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_56909300_56909500
m54284U_201217_021426/11731436/ccs	chr15	-	188	1	Intergenic	novelGene_7804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAACAAAATAAATGAATAA	7094	False	NA	NA	False	NA	NA	NA	78848624	78848436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_78848400_78848600
m54284U_201217_021426/11733225/ccs	chr4	-	223	1	Intergenic	novelGene_1893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	62398125	62397902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_62397900_62398100
m54284U_201217_021426/117375457/ccs	chr13	-	189	1	Intergenic	novelGene_7250	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAAGCTAAGATCTGCC	NA	False	NA	NA	False	NA	NA	NA	96697844	96697655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_96697700_96697800
m54284U_201217_021426/117376060/ccs	chr17	-	156	1	Antisense	novelGene_ENSMUSG00000092392.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATACATAAATCAA	NA	False	NA	NA	False	NA	NA	NA	36564077	36563921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_-_36563900_36564100
m54284U_201217_021426/117377452/ccs	chr8	-	182	1	Intergenic	novelGene_4535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAATGACTATATGACA	NA	False	NA	NA	False	NA	NA	NA	118223302	118223120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_118223100_118223300
m54284U_201217_021426/117377664/ccs	chr1	-	189	1	Intergenic	novelGene_461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAATAATTTAACT	9861	False	NA	NA	False	NA	NA	NA	167298736	167298547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_167298500_167298700
m54284U_201217_021426/117440633/ccs	chr3	+	215	1	Intergenic	novelGene_1721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGTCATAGGCATGAG	NA	False	NA	NA	False	NA	NA	NA	153514530	153514745	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_153514500_153514700
m54284U_201217_021426/117508127/ccs	chr11	-	180	1	Intergenic	novelGene_5870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTATTTTGATTTTACA	9676	False	NA	-10	True	NA	NA	NA	59192049	59191869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_59191900_59192000
m54284U_201217_021426/117703586/ccs	chr1	-	181	1	Intergenic	novelGene_396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGGACCATGTAGAGACT	8184	False	NA	NA	False	NA	NA	NA	155272252	155272071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_155272100_155272300
m54284U_201217_021426/117703685/ccs	chrX	-	167	1	Intergenic	novelGene_9599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAATGATGTCATTTC	NA	False	NA	NA	False	NA	NA	NA	104989244	104989077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_104989100_104989200
m54284U_201217_021426/117704411/ccs	chr4	-	180	1	Intergenic	novelGene_2053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTTTAAAAAAAAAAGACTA	NA	False	NA	NA	False	NA	NA	NA	118054870	118054690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_118054700_118054900
m54284U_201217_021426/117705146/ccs	chr4	+	190	1	Intergenic	novelGene_2325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTGTGTGTGTCTGGTCG	NA	False	NA	4	True	NA	NA	NA	144130315	144130505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_144130300_144130500
m54284U_201217_021426/117769644/ccs	chr2	+	92	1	Intergenic	novelGene_888	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAAGCAATGGGGAG	NA	False	NA	NA	False	NA	NA	NA	81680451	81680543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_81680500_81680500
m54284U_201217_021426/117835624/ccs	chr4	+	188	1	Intergenic	novelGene_2061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTATTTTTTGTTTTTG	NA	False	NA	NA	False	NA	NA	NA	119155212	119155400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_119155200_119155400
m54284U_201217_021426/117901809/ccs	chr13	-	193	1	Intergenic	novelGene_7191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACACAAAGGCTTACAC	NA	False	NA	NA	False	NA	NA	NA	67804453	67804260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_67804300_67804500
m54284U_201217_021426/118032995/ccs	chr3	-	169	1	Intergenic	novelGene_1483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTTAACT	NA	False	NA	NA	False	NA	NA	NA	88200759	88200590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88200600_88200800
m54284U_201217_021426/118096095/ccs	chr16	-	208	1	Intergenic	novelGene_8314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCATCCTTCCCTTCACT	NA	False	NA	NA	False	NA	NA	NA	90014014	90013806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_90013800_90014000
m54284U_201217_021426/118097758/ccs	chr12	-	165	1	Intergenic	novelGene_6681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAACAGAGA	NA	False	NA	NA	False	NA	NA	NA	69332800	69332635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_69332600_69332800
m54284U_201217_021426/118162427/ccs	chrX	-	185	1	Intergenic	novelGene_9631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTTGCCTGCAGTA	NA	False	NA	NA	False	NA	NA	NA	133476128	133475943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_133475900_133476100
m54284U_201217_021426/118162876/ccs	chr9	-	161	1	Intergenic	novelGene_4660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAATAATAA	8404	False	NA	NA	False	NA	NA	NA	21240039	21239878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21239900_21240000
m54284U_201217_021426/118228472/ccs	chr3	+	1334	1	NIC	ENSMUSG00000054091.10	novel	1160	2	NA	NA	200	-448	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTATCTTT	NA	False	NA	107	True	AATAAA	-8	NA	122718051	122719385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_122718100_122719400
m54284U_201217_021426/118294815/ccs	chr15	-	182	1	Intergenic	novelGene_7894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAGAGAGAAACCCTG	NA	False	NA	NA	False	NA	NA	NA	86078648	86078466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_86078500_86078600
m54284U_201217_021426/118295311/ccs	chr9	+	184	1	Intergenic	novelGene_5052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAACAACAACAACAAAAT	NA	False	NA	NA	False	NA	NA	NA	103272052	103272236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_103272100_103272200
m54284U_201217_021426/118425266/ccs	chr8	-	183	1	Intergenic	novelGene_4609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	126737094	126736911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_126736900_126737100
m54284U_201217_021426/118491596/ccs	chr19	-	177	1	Intergenic	novelGene_9256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATTAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	41437713	41437536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_41437500_41437700
m54284U_201217_021426/118554803/ccs	chr11	-	193	1	Intergenic	novelGene_5719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTTCTCATGGGCAGT	4844	False	NA	NA	False	NA	NA	NA	20148931	20148738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_20148700_20148900
m54284U_201217_021426/118620198/ccs	chr1	-	156	1	Intergenic	novelGene_355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAATCAGACATGTAA	NA	False	NA	NA	False	NA	NA	NA	136918636	136918480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_136918500_136918600
m54284U_201217_021426/118686913/ccs	chr18	-	179	1	Intergenic	novelGene_8996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	66629864	66629685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_66629700_66629900
m54284U_201217_021426/118688414/ccs	chr5	-	158	1	Intergenic	novelGene_2763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	110200943	110200785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_110200800_110200900
m54284U_201217_021426/118817093/ccs	chr2	-	182	1	Intergenic	novelGene_822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTTTACCATGAGAAAAGT	NA	False	NA	NA	False	NA	NA	NA	66988551	66988369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_66988400_66988600
m54284U_201217_021426/118817104/ccs	chr15	+	153	1	Intergenic	novelGene_7883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAATAAATGCTTT	NA	False	NA	NA	False	NA	NA	NA	84781871	84782024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_84781900_84782000
m54284U_201217_021426/118817375/ccs	chr11	+	156	1	Intergenic	novelGene_5793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGAGGCGATG	7966	False	NA	NA	False	NA	NA	NA	48724044	48724200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_48724000_48724200
m54284U_201217_021426/118818710/ccs	chr15	+	2031	1	FSM	ENSMUSG00000077737.3	ENSMUST00000104549.3	81	1	-1759	-191	-1759	191	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTGTGGTGATCTAAG	2248	False	NA	34	True	AATAAA	-15	NA	5146126	5148157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_5146100_5148200
m54284U_201217_021426/118948303/ccs	chr8	+	200	1	Intergenic	novelGene_4316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGTGCACCACCAGGTGC	7550	False	NA	NA	False	NA	NA	NA	70384364	70384564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_70384400_70384600
m54284U_201217_021426/119014607/ccs	chr5	+	2842	1	Antisense	novelGene_ENSMUSG00000000149.11_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCAAGTCTGGAGTGCT	2488	False	NA	NA	False	NA	NA	NA	140770451	140773293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_140770500_140773300
m54284U_201217_021426/119080078/ccs	chr10	-	200	1	Intergenic	novelGene_5357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACTACAGAAAGAAACAA	1272	False	NA	NA	False	AAGAAA	-3	NA	62763129	62762929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62762900_62763100
m54284U_201217_021426/119081013/ccs	chr16	-	157	1	Intergenic	novelGene_8096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCGGGTCCCAGCATTC	NA	False	NA	NA	False	NA	NA	NA	16933646	16933489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_16933500_16933600
m54284U_201217_021426/119145143/ccs	chr2	-	174	1	Intergenic	novelGene_722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGTTGCTAGCCGGGCG	NA	False	NA	NA	False	NA	NA	NA	32547385	32547211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32547200_32547400
m54284U_201217_021426/119211609/ccs	chr19	+	188	1	Intergenic	novelGene_9170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTCTTAGAAGTGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	17387263	17387451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_17387300_17387500
m54284U_201217_021426/119275834/ccs	chr4	+	183	1	Intergenic	novelGene_1793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGAACTCTTCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	34426197	34426380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_34426200_34426400
m54284U_201217_021426/11927796/ccs	chr7	-	174	1	Intergenic	novelGene_4091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGGAAGG	8352	False	NA	NA	False	NA	NA	NA	126343251	126343077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_126343100_126343300
m54284U_201217_021426/11927998/ccs	chr2	+	200	1	Intergenic	novelGene_789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCTAAGTTAATCACCAA	NA	False	NA	NA	False	NA	NA	NA	48812009	48812209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_48812000_48812200
m54284U_201217_021426/11930111/ccs	chr10	+	184	1	Intergenic	novelGene_5230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATGTGTACTAACTT	NA	False	NA	NA	False	NA	NA	NA	24618540	24618724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_24618500_24618700
m54284U_201217_021426/119406669/ccs	chr2	+	300	1	Intergenic	novelGene_992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGAGGTGAACAAACC	NA	False	NA	NA	False	NA	NA	NA	118002796	118003096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_118002800_118003100
m54284U_201217_021426/119408979/ccs	chr17	-	179	1	Intergenic	novelGene_8462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTGTCGGATCC	NA	False	NA	NA	False	NA	NA	NA	28720772	28720593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_28720600_28720800
m54284U_201217_021426/119474949/ccs	chr6	+	195	1	Intergenic	novelGene_3235	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTGATGATTCCTAGG	1	True	NA	NA	False	NA	NA	NA	39872214	39872409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_39872200_39872400
m54284U_201217_021426/119537745/ccs	chr11	-	159	1	Intergenic	novelGene_6272	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTTTAAATAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	97249864	97249705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97249700_97249900
m54284U_201217_021426/119670811/ccs	chr12	-	163	1	Intergenic	novelGene_6547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTAAGGACATTCAGGA	NA	False	NA	NA	False	NA	NA	NA	4615553	4615390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_4615400_4615600
m54284U_201217_021426/119671167/ccs	chr1	-	180	1	Intergenic	novelGene_160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACTGGACTATAAAAT	NA	False	NA	NA	False	NA	NA	NA	63188464	63188284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_63188300_63188500
m54284U_201217_021426/119866017/ccs	chr11	-	183	1	Intergenic	novelGene_6276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTGGGAAGTTCGGCC	9719	False	NA	NA	False	NA	NA	NA	97523442	97523259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97523300_97523400
m54284U_201217_021426/119933111/ccs	chr10	+	228	1	Intergenic	novelGene_5425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAATATCAAAACAGAAG	NA	False	NA	NA	False	NA	NA	NA	77179796	77180024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_77179800_77180000
m54284U_201217_021426/120064391/ccs	chr2	-	176	1	Intergenic	novelGene_650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGAGTTGGTTC	5904	False	NA	NA	False	NA	NA	NA	26859050	26858874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_26858900_26859000
m54284U_201217_021426/120064640/ccs	chr10	-	179	1	Intergenic	novelGene_5384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAATGATTTAGCCAGC	NA	False	NA	NA	False	NA	NA	NA	69215325	69215146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_69215100_69215300
m54284U_201217_021426/120064815/ccs	chr11	-	184	1	Antisense	novelGene_ENSMUSG00000009350.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	87685342	87685158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_87685200_87685300
m54284U_201217_021426/120259248/ccs	chr7	-	176	1	Intergenic	novelGene_3730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAATTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	27379837	27379661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_27379700_27379800
m54284U_201217_021426/120260604/ccs	chr1	-	859	1	FSM	ENSMUSG00000089782.2	ENSMUST00000162698.2	489	1	-113	-257	-113	257	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGTAAATTCATGAGACA	8430	False	NA	NA	False	AATAAA	-35	NA	97877227	97876368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_97876400_97877200
m54284U_201217_021426/120326880/ccs	chr17	-	109	1	Intergenic	novelGene_8590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGCTTGAATATTTCAAT	NA	False	NA	NA	False	NA	NA	NA	37502174	37502065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_37502100_37502200
m54284U_201217_021426/120455443/ccs	chr12	+	175	1	Intergenic	novelGene_6848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATTTAAAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	100423218	100423393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_100423200_100423400
m54284U_201217_021426/120455467/ccs	chr3	+	174	1	Intergenic	novelGene_1534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTTCTTCTTTCCACA	NA	False	NA	NA	False	NA	NA	NA	89931772	89931946	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89931800_89931900
m54284U_201217_021426/120522984/ccs	chr16	+	162	1	Intergenic	novelGene_8330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATGTGAACTTTTCAAA	NA	False	NA	NA	False	NA	NA	NA	95569964	95570126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_95570000_95570100
m54284U_201217_021426/120588025/ccs	chr5	-	189	1	Intergenic	novelGene_2607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAGAATTTACC	NA	False	NA	NA	False	NA	NA	NA	68009594	68009405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_68009400_68009600
m54284U_201217_021426/12058947/ccs	chr16	-	201	1	Intergenic	novelGene_8194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAACAGAAAATAATGAATA	NA	False	NA	NA	False	AAAACA	-6	NA	31671166	31670965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31671000_31671200
m54284U_201217_021426/12059070/ccs	chr7	-	176	1	Intergenic	novelGene_3656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GGAAAAAGAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	12750235	12750059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_12750100_12750200
m54284U_201217_021426/120654372/ccs	chr14	+	3334	12	NIC	ENSMUSG00000021794.17	novel	3390	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	440.438436707022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAGTTCTCTATGGGGAC	NA	False	NA	13	True	AATAAA	-22	NA	34032683	34067222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_34033300_34041838_34041920_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
m54284U_201217_021426/120783666/ccs	chr1	-	204	1	Intergenic	novelGene_546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAACAAAACCACAA	NA	False	NA	NA	False	NA	NA	NA	190743228	190743024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_190743000_190743200
m54284U_201217_021426/120784308/ccs	chr2	+	164	1	Intergenic	novelGene_799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTGTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	56853130	56853294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_56853100_56853300
m54284U_201217_021426/120785155/ccs	chr8	+	179	1	Intergenic	novelGene_4439	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAGAACAACCTTGTTC	1158	False	NA	NA	False	NA	NA	NA	106283411	106283590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106283400_106283600
m54284U_201217_021426/120848624/ccs	chr18	-	167	1	Intergenic	novelGene_9034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAGATTAGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	77736442	77736275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77736300_77736400
m54284U_201217_021426/120849143/ccs	chr1	-	188	1	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATGCAAAATGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	15012997	15012809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_15012800_15013000
m54284U_201217_021426/120850378/ccs	chr11	-	170	1	Intergenic	novelGene_6378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAGAGCAGTC	3421	False	NA	NA	False	NA	NA	NA	105122899	105122729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_105122700_105122900
m54284U_201217_021426/120914333/ccs	chr18	-	842	1	Antisense	novelGene_ENSMUSG00000024384.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTTTCATGATCTTT	NA	False	NA	NA	False	AATAAA	-20	NA	32201220	32200378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr18_-_32200400_32201200
m54284U_201217_021426/120980400/ccs	chr8	-	187	1	Intergenic	novelGene_4220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTACTGGAGCACATA	NA	False	NA	NA	False	NA	NA	NA	20715300	20715113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_20715100_20715300
m54284U_201217_021426/121111823/ccs	chr5	-	169	1	Intergenic	novelGene_2919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTTTAAAAAGAAGGGA	NA	False	NA	NA	False	NA	NA	NA	125443988	125443819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125443800_125444000
m54284U_201217_021426/12124162/ccs	chr2	-	189	1	Intergenic	novelGene_1052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAATATGGTGGAT	7848	False	NA	NA	False	NA	NA	NA	126868390	126868201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_126868200_126868400
m54284U_201217_021426/12124867/ccs	chr14	+	189	1	Intergenic	novelGene_7533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGGCCAGCCCAGA	NA	False	NA	NA	False	NA	NA	NA	70406377	70406566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_70406400_70406600
m54284U_201217_021426/12125420/ccs	chr11	-	229	1	Intergenic	novelGene_6487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAAAGGGCTTAAAATTT	NA	False	NA	NA	False	NA	NA	NA	116956598	116956369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116956400_116956600
m54284U_201217_021426/121440411/ccs	chr3	-	4703	1	ISM	ENSMUSG00000028106.14	ENSMUST00000200164.5	7498	10	52908	681	11034	-681	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCACAACATAGTGTGT	8441	False	NA	-8	True	AATAAA	-21	NA	95673036	95668333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_-_95668300_95673000
m54284U_201217_021426/121505019/ccs	chr11	+	245	1	Intergenic	novelGene_6224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTACTCAGAGCCAGAC	1325	False	NA	NA	False	NA	NA	NA	95311646	95311891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95311600_95311900
m54284U_201217_021426/121636105/ccs	chr2	+	175	1	Intergenic	novelGene_1318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAAGGTTGGG	NA	False	NA	NA	False	NA	NA	NA	180523701	180523876	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_180523700_180523900
m54284U_201217_021426/121636187/ccs	chr2	+	4563	1	ISM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	30086	0	1245	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTTGTCTTTTTAATT	4467	False	NA	NA	False	NA	NA	NA	181192363	181196926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_181192400_181196900
m54284U_201217_021426/121700399/ccs	chr10	-	249	1	Intergenic	novelGene_5218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCTCTACAGACTAG	NA	False	NA	NA	False	NA	NA	NA	20225202	20224953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_20225000_20225200
m54284U_201217_021426/121765968/ccs	chrM	+	645	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	0	310	0	-310	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGTAAGCAAAAGAATCA	-3	True	NA	-80	True	AAAAAG	-5	NA	69	714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_100_700
m54284U_201217_021426/121898292/ccs	chr1	+	669	1	Intergenic	novelGene_283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACGGATCTATTAATCA	NA	False	NA	NA	False	AATAAA	-41	NA	122803065	122803734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_122803100_122803700
m54284U_201217_021426/121962790/ccs	chr16	-	158	1	Intergenic	novelGene_8115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGGGCTGGTGAGATGG	NA	False	NA	NA	False	NA	NA	NA	18113730	18113572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18113600_18113700
m54284U_201217_021426/122029370/ccs	chr17	-	190	1	Intergenic	novelGene_8538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTCACCCTTTCCTCTC	8769	False	NA	NA	False	NA	NA	NA	34019291	34019101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_34019100_34019300
m54284U_201217_021426/122029709/ccs	chr8	+	191	1	Intergenic	novelGene_4455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATGCTTATAGCCCAGGA	NA	False	NA	NA	False	NA	NA	NA	106839434	106839625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_106839400_106839600
m54284U_201217_021426/122030012/ccs	chr17	-	196	1	Intergenic	novelGene_8498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATATGTGTACATGTTTT	9568	False	NA	NA	False	NA	NA	NA	29832780	29832584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29832600_29832800
m54284U_201217_021426/122030523/ccs	chr11	-	178	1	Intergenic	novelGene_6403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGTTTAAAAAAA	2561	False	NA	NA	False	NA	NA	NA	106996931	106996753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106996800_106996900
m54284U_201217_021426/122030681/ccs	chr10	-	190	1	Intergenic	novelGene_5181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	5891880	5891690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_5891700_5891900
m54284U_201217_021426/122030749/ccs	chr5	-	4637	1	Antisense	novelGene_ENSMUSG00000014932.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAATCCTAACAAGTT	NA	False	NA	NA	False	ACTAAA	-14	NA	32799229	32794592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_32794600_32799200
m54284U_201217_021426/122094494/ccs	chr11	+	184	1	Intergenic	novelGene_6429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAGAGAGGTGTT	NA	False	NA	NA	False	NA	NA	NA	108779380	108779564	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_108779400_108779600
m54284U_201217_021426/122094629/ccs	chr12	-	166	1	Intergenic	novelGene_6878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTTTTAAAAAAGACTGAAA	NA	False	NA	NA	False	NA	NA	NA	105860422	105860256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_105860300_105860400
m54284U_201217_021426/122161587/ccs	chr10	-	4165	1	Genic_Genomic	ENSMUSG00000063760.10	novel	NA	NA	NA	NA	-528	-112355	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAATATTTCTGATATG	NA	False	NA	NA	False	GATAAA	-14	NA	31485708	31481543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_-_31481500_31485700
m54284U_201217_021426/122224987/ccs	chr1	-	192	1	Intergenic	novelGene_367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGGAGCATGACAGCATT	NA	False	NA	NA	False	NA	NA	NA	145752100	145751908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_145751900_145752100
m54284U_201217_021426/122227132/ccs	chr1	-	190	1	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGAAAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	34943292	34943102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_34943100_34943300
m54284U_201217_021426/122292619/ccs	chr19	-	193	1	Intergenic	novelGene_9221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTCTATAAGCTTCTCA	9013	False	NA	NA	False	NA	NA	NA	32730767	32730574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_32730600_32730800
m54284U_201217_021426/122356144/ccs	chr11	-	186	1	Antisense	novelGene_ENSMUSG00000025571.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAACCTCTCCTTTATA	NA	False	NA	NA	False	NA	NA	NA	117643256	117643070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_117643100_117643300
m54284U_201217_021426/122357115/ccs	chr17	+	197	1	Intergenic	novelGene_8466	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAGAAGAAGAAGT	NA	False	NA	NA	False	NA	NA	NA	28843211	28843408	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_28843200_28843400
m54284U_201217_021426/122357417/ccs	chr1	+	249	1	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAAAAAAATGCCC	4903	False	NA	75	True	NA	NA	NA	36707311	36707560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36707300_36707600
m54284U_201217_021426/122553361/ccs	chrX	-	208	1	Intergenic	novelGene_9633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCATGGTTTTTGTTGT	NA	False	NA	NA	False	NA	NA	NA	134778906	134778698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_134778700_134778900
m54284U_201217_021426/12255637/ccs	chr12	-	168	1	Intergenic	novelGene_6860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATGGCAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	102706280	102706112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_102706100_102706300
m54284U_201217_021426/12257002/ccs	chr3	+	186	1	Intergenic	novelGene_1367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGCTATACTGGGTAT	NA	False	NA	NA	False	NA	NA	NA	27703895	27704081	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_27703900_27704100
m54284U_201217_021426/122617941/ccs	chr5	-	199	1	Intergenic	novelGene_2807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAGAGGAGACAGATG	NA	False	NA	NA	False	NA	NA	NA	115768404	115768205	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115768200_115768400
m54284U_201217_021426/122618714/ccs	chrX	-	3539	1	Intergenic	novelGene_9623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	128834825	128831286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_128831300_128834800
m54284U_201217_021426/122684433/ccs	chr9	+	175	1	Intergenic	novelGene_5057	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTTTCATGAGCTAGA	NA	False	NA	NA	False	NA	NA	NA	105384758	105384933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_105384800_105384900
m54284U_201217_021426/122685711/ccs	chrX	-	202	1	Intergenic	novelGene_9405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATACATATTTCTGGGGC	NA	False	NA	NA	False	TTTAAA	-3	NA	20206775	20206573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_20206600_20206800
m54284U_201217_021426/122750032/ccs	chr11	-	197	1	Intergenic	novelGene_5814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTATGCAAATGGCCCT	6499	False	NA	NA	False	NA	NA	NA	51851516	51851319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_51851300_51851500
m54284U_201217_021426/122880721/ccs	chr1	-	189	1	Intergenic	novelGene_494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCAACAAAACAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	178036242	178036053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_178036100_178036200
m54284U_201217_021426/122881758/ccs	chr11	-	197	1	Intergenic	novelGene_5681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGCAGTGGTGGCGTA	NA	False	NA	NA	False	NA	NA	NA	5670118	5669921	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_5669900_5670100
m54284U_201217_021426/122946874/ccs	chr8	+	192	1	Intergenic	novelGene_4493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGGAACCAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	111721500	111721692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111721500_111721700
m54284U_201217_021426/123012505/ccs	chr15	-	220	1	Intergenic	novelGene_7919	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTAACACATAAGCCAA	NA	False	NA	NA	False	NA	NA	NA	96219214	96218994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_96219000_96219200
m54284U_201217_021426/123144472/ccs	chr17	-	184	1	Intergenic	novelGene_8389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTTTTCCACTTTTTAT	NA	False	NA	NA	False	NA	NA	NA	17958286	17958102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_17958100_17958300
m54284U_201217_021426/123144681/ccs	chr8	+	195	1	Intergenic	novelGene_4187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	984	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTACAATACCAATATC	1184	False	NA	NA	False	ATTAAA	-10	NA	3667147	3667342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_3667100_3667300
m54284U_201217_021426/123208052/ccs	chr9	+	5518	1	Genic_Genomic	ENSMUSG00000079260.4	novel	NA	NA	NA	NA	4580	3926	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCGGTGTCCATTCTTCA	NA	False	NA	14	True	AATAAA	-22	NA	114234752	114240270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_114234800_114240300
m54284U_201217_021426/12320902/ccs	chr4	-	176	1	Intergenic	novelGene_2303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATATTTTAAACAA	4963	False	NA	NA	False	NA	NA	NA	141083256	141083080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_141083100_141083300
m54284U_201217_021426/123210165/ccs	chr3	-	175	1	Intergenic	novelGene_1521	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAGTAAGGTATATAA	9959	False	NA	NA	False	NA	NA	NA	89377932	89377757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89377800_89377900
m54284U_201217_021426/12321324/ccs	chr16	+	201	1	Intergenic	novelGene_8226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGCCTCAGAATCCTAGA	6907	False	NA	NA	False	NA	NA	NA	33192069	33192270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_33192100_33192300
m54284U_201217_021426/12323497/ccs	chr5	+	161	1	Intergenic	novelGene_2514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	31167350	31167511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_31167400_31167500
m54284U_201217_021426/123339330/ccs	chrX	-	187	1	Intergenic	novelGene_9542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATCTAT	NA	False	NA	NA	False	NA	NA	NA	93249012	93248825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_93248800_93249000
m54284U_201217_021426/123340700/ccs	chr1	-	172	1	Intergenic	novelGene_146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCCAGACTAGGGTATAG	NA	False	NA	NA	False	NA	NA	NA	59927754	59927582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59927600_59927800
m54284U_201217_021426/123341432/ccs	chr19	+	237	1	Intergenic	novelGene_9220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGAAGGTTTTAGTTAT	3438	False	NA	NA	False	AATACA	-15	NA	32715836	32716073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_32715800_32716100
m54284U_201217_021426/123470033/ccs	chr8	+	2883	7	NIC	ENSMUSG00000019428.17	novel	1799	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	268	junction_4	447.377047044461	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTCTAGGCCTCTTTC	NA	False	NA	27	True	AATAAA	-19	NA	70980495	70987978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70985400_70986766_70986845_70987132
m54284U_201217_021426/123470084/ccs	chr16	+	192	1	Intergenic	novelGene_8102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAATCAGAATCTT	NA	False	NA	NA	False	NA	NA	NA	17250878	17251070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17250900_17251100
m54284U_201217_021426/123537843/ccs	chr17	+	185	1	Intergenic	novelGene_8407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGAGAATAACAAAACCAG	NA	False	NA	NA	False	NA	NA	NA	24344124	24344309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_24344100_24344300
m54284U_201217_021426/123666481/ccs	chr2	-	187	1	Intergenic	novelGene_1115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCACCACCATTCCTGGC	NA	False	NA	NA	False	NA	NA	NA	151905621	151905434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_151905400_151905600
m54284U_201217_021426/123666669/ccs	chr5	-	191	1	Intergenic	novelGene_2978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGATGAGAGAGGAAGAG	4986	False	NA	NA	False	NA	NA	NA	135522736	135522545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135522500_135522700
m54284U_201217_021426/123668047/ccs	chr1	+	175	1	Intergenic	novelGene_310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATTAAAAAAAAGAAAACCA	1561	False	NA	NA	False	NA	NA	NA	131972156	131972331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_131972200_131972300
m54284U_201217_021426/123797594/ccs	chr2	-	5059	1	Intergenic	novelGene_1106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTTGACGGAATGCCTGA	NA	False	NA	NA	False	NA	NA	NA	146861713	146856654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_146856700_146861700
m54284U_201217_021426/123799539/ccs	chr14	-	283	1	Intergenic	novelGene_7464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGGGGCAGGTGTTGA	9242	False	NA	NA	False	AATAAA	-25	NA	55083149	55082866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_55082900_55083100
m54284U_201217_021426/124059684/ccs	chr13	+	174	1	Intergenic	novelGene_7028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTTTTAAAAATACATA	NA	False	NA	NA	False	NA	NA	NA	40790506	40790680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_40790500_40790700
m54284U_201217_021426/124059949/ccs	chr1	+	3205	1	FSM	ENSMUSG00000039224.2	ENSMUST00000045108.2	3212	1	274	-267	274	267	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGATTATGGTTTTTT	NA	False	NA	1	True	NA	NA	NA	186699886	186703091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_186699900_186703100
m54284U_201217_021426/124060404/ccs	chr2	-	198	1	Intergenic	novelGene_1314	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	179895540	179895342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_179895300_179895500
m54284U_201217_021426/124061312/ccs	chr5	-	177	1	Intergenic	novelGene_3038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	142876212	142876035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142876000_142876200
m54284U_201217_021426/124061608/ccs	chr17	-	194	1	Intergenic	novelGene_8406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTTGACCATTCTATCT	NA	False	NA	NA	False	NA	NA	NA	24337812	24337618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24337600_24337800
m54284U_201217_021426/124128050/ccs	chr5	+	1464	1	Antisense	novelGene_ENSMUSG00000060261.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGCATGGTGGCACACG	NA	False	NA	NA	False	NA	NA	NA	134277849	134279313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_134277800_134279300
m54284U_201217_021426/124192511/ccs	chr10	-	190	1	Intergenic	novelGene_5266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAAACACTTAACTC	NA	False	NA	NA	False	NA	NA	NA	39915692	39915502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_39915500_39915700
m54284U_201217_021426/124193304/ccs	chr4	-	180	1	Intergenic	novelGene_2023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTAGTTTGTGTAT	NA	False	NA	NA	False	NA	NA	NA	116529028	116528848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116528800_116529000
m54284U_201217_021426/124258131/ccs	chr4	-	205	1	Intergenic	novelGene_2433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATTCTTTTATGTT	1184	False	NA	NA	False	NA	NA	NA	155773384	155773179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155773200_155773400
m54284U_201217_021426/124322740/ccs	chr15	-	179	1	Intergenic	novelGene_7834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTGTGGTGGCGCACG	NA	False	NA	NA	False	NA	NA	NA	81200265	81200086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81200100_81200300
m54284U_201217_021426/124323755/ccs	chr4	-	157	1	Intergenic	novelGene_1742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAATTAAAAC	NA	False	NA	NA	False	NA	NA	NA	11158161	11158004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11158000_11158200
m54284U_201217_021426/124324625/ccs	chr6	-	190	1	Intergenic	novelGene_3442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAACAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	117954202	117954012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_117954000_117954200
m54284U_201217_021426/124454598/ccs	chr6	+	1190	4	NNC	ENSMUSG00000030116.15	novel	2491	4	NA	NA	336	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	69.5317673201729	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTCACGGGCATGTTT	8067	False	NA	NA	False	TTTAAA	-10	NA	122499793	122506249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_122499850_122502909_122502998_122503745_122503820_122505277
m54284U_201217_021426/12452262/ccs	chr2	-	178	1	Intergenic	novelGene_897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAACTGAACTT	NA	False	NA	NA	False	NA	NA	NA	84458644	84458466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_84458500_84458600
m54284U_201217_021426/1246022/ccs	chrX	+	143	1	Intergenic	novelGene_9730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAACCGTTAA	NA	False	NA	NA	False	NA	NA	NA	162540952	162541095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_162541000_162541100
m54284U_201217_021426/124716323/ccs	chr7	+	196	1	Intergenic	novelGene_3774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCAGGCAAGATGGAGC	NA	False	NA	NA	False	NA	NA	NA	29888819	29889015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29888800_29889000
m54284U_201217_021426/124783156/ccs	chr18	+	3676	1	FSM	ENSMUSG00000036904.7	ENSMUST00000041080.7	5974	1	0	2298	0	-2298	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATCGCGTTTTTGCAC	0	True	NA	NA	False	AGTAAA	-20	NA	9212162	9215838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_+_9212200_9215800
m54284U_201217_021426/124912796/ccs	chr19	-	179	1	Intergenic	novelGene_9164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATAGCTCCTCGTA	NA	False	NA	NA	False	NA	NA	NA	12083597	12083418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_12083400_12083600
m54284U_201217_021426/124977314/ccs	chr4	+	188	1	Intergenic	novelGene_2236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTTATTGGGGAGG	NA	False	NA	NA	False	NA	NA	NA	134521551	134521739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_134521600_134521700
m54284U_201217_021426/124977587/ccs	chr12	+	205	1	Intergenic	novelGene_6684	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTAAGACTGCTGTTC	NA	False	NA	NA	False	NA	NA	NA	69397259	69397464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_69397300_69397500
m54284U_201217_021426/124977742/ccs	chr3	+	177	1	Intergenic	novelGene_1726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAACTTAGTTC	NA	False	NA	NA	False	NA	NA	NA	157400302	157400479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_157400300_157400500
m54284U_201217_021426/124978316/ccs	chr8	+	181	1	Intergenic	novelGene_4475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAAAACACACCCCCATT	NA	False	NA	3	True	NA	NA	NA	108122389	108122570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_108122400_108122600
m54284U_201217_021426/125108447/ccs	chr11	+	198	1	Intergenic	novelGene_6311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGGGTGACTGTG	NA	False	NA	NA	False	NA	NA	NA	99001821	99002019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_99001800_99002000
m54284U_201217_021426/125110847/ccs	chr9	+	241	1	Intergenic	novelGene_4794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTTTTTTGAGTTTTGT	NA	False	NA	NA	False	TTTAAA	-5	NA	56935371	56935612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_56935400_56935600
m54284U_201217_021426/125175336/ccs	chr17	+	241	1	Intergenic	novelGene_8349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCAATTGCTACTTCAT	NA	False	NA	NA	False	NA	NA	NA	6462836	6463077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_6462800_6463100
m54284U_201217_021426/12517624/ccs	chr2	-	172	1	Intergenic	novelGene_1099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAAATT	7089	False	NA	NA	False	NA	NA	NA	144151301	144151129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_144151100_144151300
m54284U_201217_021426/12518462/ccs	chr17	+	190	1	Intergenic	novelGene_8733	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCACCTCCTCCT	NA	False	NA	NA	False	AATACA	-15	NA	79095792	79095982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_79095800_79096000
m54284U_201217_021426/12519122/ccs	chr10	+	2778	1	NIC	ENSMUSG00000075706.12	novel	879	7	NA	NA	174	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTCTTTGGGTC	829	False	NA	4	True	AATAAA	-14	NA	79889495	79892273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_+_79889500_79892300
m54284U_201217_021426/12519893/ccs	chr5	-	5307	1	NIC	ENSMUSG00000046572.11	novel	6816	3	NA	NA	0	-4817	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGGAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	38842093	38836786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_38836800_38842100
m54284U_201217_021426/125305069/ccs	chrX	-	182	1	Intergenic	novelGene_9499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGAAAGCAGGAGCTGA	NA	False	NA	NA	False	NA	NA	NA	72877832	72877650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_72877600_72877800
m54284U_201217_021426/125306420/ccs	chr17	-	2953	1	NIC	ENSMUSG00000007670.11	novel	2698	19	NA	NA	0	-5065	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	AAAAAG	-28	NA	57338522	57335569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_57335600_57338500
m54284U_201217_021426/125306451/ccs	chr11	+	169	1	Intergenic	novelGene_5648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATTGTAGAGGAA	168	False	NA	NA	False	NA	NA	NA	3204148	3204317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_3204100_3204300
m54284U_201217_021426/125370604/ccs	chr15	+	188	1	FSM	ENSMUSG00000116395.2	ENSMUST00000229927.2	2437	1	1939	310	1939	-310	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCCCATTTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	101215921	101216109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_+_101215900_101216100
m54284U_201217_021426/125435978/ccs	chr15	-	173	1	Intergenic	novelGene_7817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGCTATTGAATT	NA	False	NA	NA	False	NA	NA	NA	79630873	79630700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_79630700_79630900
m54284U_201217_021426/125436791/ccs	chr11	-	193	1	Intergenic	novelGene_6523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCATTACCGATGGTTG	NA	False	NA	NA	False	NA	NA	NA	120951682	120951489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_120951500_120951700
m54284U_201217_021426/125503950/ccs	chr15	+	182	1	Intergenic	novelGene_7646	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAATCCCAAACCC	NA	False	NA	NA	False	NA	NA	NA	12508031	12508213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_12508000_12508200
m54284U_201217_021426/125568750/ccs	chr17	+	177	1	Intergenic	novelGene_8442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGCTCTAGTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	27150233	27150410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_27150200_27150400
m54284U_201217_021426/125569616/ccs	chr11	-	182	1	Intergenic	novelGene_6256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTAATATGTATTTC	NA	False	NA	NA	False	NA	NA	NA	96749861	96749679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_96749700_96749900
m54284U_201217_021426/125632660/ccs	chr14	-	184	1	Intergenic	novelGene_7394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATGTGTGTTTATAGCT	NA	False	NA	NA	False	NA	NA	NA	34152663	34152479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_34152500_34152700
m54284U_201217_021426/125698654/ccs	chr7	-	177	1	Intergenic	novelGene_3937	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAAACTTGGG	NA	False	NA	NA	False	NA	NA	NA	81968400	81968223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_81968200_81968400
m54284U_201217_021426/125699324/ccs	chr11	-	199	1	Intergenic	novelGene_6426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	826	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGGATGATTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	107486894	107486695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107486700_107486900
m54284U_201217_021426/125765944/ccs	chr7	-	162	1	Intergenic	novelGene_4141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATCTTTGGGGGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	137126812	137126650	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_137126600_137126800
m54284U_201217_021426/125829448/ccs	chr7	-	178	1	Intergenic	novelGene_3882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTTTAAAAAGCATAC	3657	False	NA	NA	False	NA	NA	NA	65890632	65890454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_65890500_65890600
m54284U_201217_021426/125831483/ccs	chr1	-	174	1	Intergenic	novelGene_237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAGAAGAAGTA	NA	False	NA	NA	False	NA	NA	NA	87186851	87186677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_87186700_87186900
m54284U_201217_021426/125962377/ccs	chr9	-	164	1	Intergenic	novelGene_4623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGATAATAAAGCTACAACT	NA	False	NA	NA	False	NA	NA	NA	3359354	3359190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_3359200_3359400
m54284U_201217_021426/126027448/ccs	chr9	-	184	1	Intergenic	novelGene_4705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAACAAATGAATATA	NA	False	NA	NA	False	NA	NA	NA	36403648	36403464	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_36403500_36403600
m54284U_201217_021426/126028638/ccs	chr11	+	3676	26	NIC	ENSMUSG00000020290.15	novel	5145	26	NA	NA	-129	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	458.823200808329	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTGTTTTTTGTAT	NA	False	NA	12	True	ATTAAA	-21	NA	23205911	23246233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_23206168_23206645_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
m54284U_201217_021426/126093644/ccs	chr12	-	3461	1	Genic_Genomic	ENSMUSG00000056770.16	novel	NA	NA	NA	NA	-19	-17889	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTGCCTAGAACTGGATT	NA	False	NA	NA	False	NA	NA	NA	108145592	108142131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_-_108142100_108145600
m54284U_201217_021426/126224763/ccs	chr18	-	407	1	Intergenic	novelGene_8945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAGAAAA	NA	False	NA	NA	False	AAGAAA	-40	NA	44514816	44514409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_44514400_44514800
m54284U_201217_021426/126224972/ccs	chr15	-	183	1	Intergenic	novelGene_7974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACAGGCAGAGTCTTT	5421	False	NA	NA	False	NA	NA	NA	99767465	99767282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99767300_99767500
m54284U_201217_021426/126288416/ccs	chr1	-	213	1	Intergenic	novelGene_522	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTCAGGATAGTCCCT	6348	False	NA	NA	False	NA	NA	NA	181137855	181137642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_181137600_181137900
m54284U_201217_021426/126289060/ccs	chr6	+	246	1	Intergenic	novelGene_3571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATGTTCACAGATATG	NA	False	NA	NA	False	NA	NA	NA	142953969	142954215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_142954000_142954200
m54284U_201217_021426/126289544/ccs	chr11	+	3300	1	NIC	ENSMUSG00000078706.5	novel	1172	3	NA	NA	0	-6750	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTCTCTCAAAAGTTA	8814	False	NA	NA	False	NA	NA	NA	96142469	96145769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_96142500_96145800
m54284U_201217_021426/126356120/ccs	chr13	+	235	1	Intergenic	novelGene_7125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTTTCTTCCAGTTG	NA	False	NA	NA	False	NA	NA	NA	58594139	58594374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_58594100_58594400
m54284U_201217_021426/126420350/ccs	chr4	-	187	1	Intergenic	novelGene_1999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGTATAAAATACAG	NA	False	NA	NA	False	NA	NA	NA	108393742	108393555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108393600_108393700
m54284U_201217_021426/126487331/ccs	chr9	-	177	1	Intergenic	novelGene_5066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTTGTGTT	NA	False	NA	NA	False	NA	NA	NA	106612243	106612066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_106612100_106612200
m54284U_201217_021426/126813816/ccs	chr4	-	125	1	Intergenic	novelGene_1846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	2543	False	NA	NA	False	NA	NA	NA	45395109	45394984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_45395000_45395100
m54284U_201217_021426/126815035/ccs	chr11	+	183	1	Intergenic	novelGene_6318	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTACATAAACTGGGT	NA	False	NA	NA	False	NA	NA	NA	100190015	100190198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_100190000_100190200
m54284U_201217_021426/126945614/ccs	chrX	-	197	1	Intergenic	novelGene_9417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCTATCTTTCAGTGTTC	NA	False	NA	NA	False	NA	NA	NA	35860321	35860124	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_35860100_35860300
m54284U_201217_021426/127141869/ccs	chr4	+	227	1	Intergenic	novelGene_2119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCACCTCTTTTTCTGAA	1142	False	NA	NA	False	NA	NA	NA	126567184	126567411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126567200_126567400
m54284U_201217_021426/127273078/ccs	chrX	+	174	1	Intergenic	novelGene_9552	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTTTGTT	NA	False	NA	NA	False	AAAAAG	-6	NA	100111406	100111580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100111400_100111600
m54284U_201217_021426/127336497/ccs	chr3	-	184	1	Intergenic	novelGene_1728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	157684777	157684593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_157684600_157684800
m54284U_201217_021426/127338431/ccs	chr2	-	221	1	Intergenic	novelGene_1131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGATTCTGCTTTTTCT	NA	False	NA	NA	False	AAAAAG	-13	NA	153123558	153123337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_153123300_153123600
m54284U_201217_021426/127402658/ccs	chr17	+	287	1	Intergenic	novelGene_8754	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCCCATTACAGAACCTT	NA	False	NA	NA	False	NA	NA	NA	83629261	83629548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_83629300_83629500
m54284U_201217_021426/127470278/ccs	chr4	-	193	1	Intergenic	novelGene_2396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTGGAAGAGCATTTGC	NA	False	NA	NA	False	NA	NA	NA	150317303	150317110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_150317100_150317300
m54284U_201217_021426/127601261/ccs	chr1	-	189	1	Intergenic	novelGene_477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTTCCGTTCATATTC	-3	True	NA	NA	False	NA	NA	NA	171136072	171135883	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_171135900_171136100
m54284U_201217_021426/127731301/ccs	chr10	-	159	1	Intergenic	novelGene_5342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAACCTCATATAAATA	1895	False	NA	NA	False	NA	NA	NA	61977257	61977098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_61977100_61977300
m54284U_201217_021426/127861545/ccs	chr6	-	4624	3	ISM	ENSMUSG00000051586.18	ENSMUST00000150503.4	2810	9	0	38973	0	0	5prime_fragment	FALSE	canonical	3	8	junction_2	19	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTTTCTGAGTTTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	120980113	120974276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr6_-_120978657_120979747_120979837_120979958
m54284U_201217_021426/127928496/ccs	chr3	-	188	1	Intergenic	novelGene_1606	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCTTTGAACTCTTCA	NA	False	NA	NA	False	NA	NA	NA	103172923	103172735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_103172700_103172900
m54284U_201217_021426/127993419/ccs	chr18	-	193	1	Intergenic	novelGene_8917	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGGAATCACCAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	36864700	36864507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36864500_36864700
m54284U_201217_021426/128057874/ccs	chr2	-	206	1	Intergenic	novelGene_570	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTGGGAAAATGATGGA	NA	False	NA	NA	False	AAAAAG	-6	NA	4743165	4742959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_4743000_4743200
m54284U_201217_021426/128057881/ccs	chr5	-	198	1	Intergenic	novelGene_3089	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCCTCCACAACCCTC	NA	False	NA	NA	False	NA	NA	NA	149563511	149563313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_149563300_149563500
m54284U_201217_021426/128123113/ccs	chr12	-	162	1	Intergenic	novelGene_6814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAATTAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717439	85717277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85717300_85717400
m54284U_201217_021426/128123780/ccs	chr7	+	192	1	Intergenic	novelGene_3995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTAACAAGAATGGATG	5976	False	NA	NA	False	NA	NA	NA	101826721	101826913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_101826700_101826900
m54284U_201217_021426/128125152/ccs	chr5	+	175	1	Intergenic	novelGene_2762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAACATTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	110192277	110192452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110192300_110192500
m54284U_201217_021426/128189499/ccs	chr15	-	197	1	Intergenic	novelGene_7679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAGTGTGAGGTGGAT	883	False	NA	NA	False	NA	NA	NA	36554706	36554509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_36554500_36554700
m54284U_201217_021426/128190107/ccs	chr6	-	179	1	Intergenic	novelGene_3378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAGAAAATG	4798	False	NA	NA	False	NA	NA	NA	88008878	88008699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_88008700_88008900
m54284U_201217_021426/128320236/ccs	chr9	-	205	1	Intergenic	novelGene_5148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTAGAACAAGGGTACAA	NA	False	NA	NA	False	NA	NA	NA	119832912	119832707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_119832700_119832900
m54284U_201217_021426/128386376/ccs	chr4	+	173	1	Intergenic	novelGene_1963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	103012293	103012466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_103012300_103012500
m54284U_201217_021426/128453452/ccs	chr9	+	3456	15	NNC	ENSMUSG00000009741.16	novel	2320	15	NA	NA	-98	0	intron_retention	FALSE	canonical	2	15	junction_4	111.606725713506	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1705	False	NA	17	True	AATAAA	-18	NA	113760404	113806069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785143_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201217_021426/12847264/ccs	chr14	-	2239	1	Intergenic	novelGene_7527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAGCTGTTACAAGTAT	NA	False	NA	NA	False	AATAAA	-22	NA	68274536	68272297	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_68272300_68274500
m54284U_201217_021426/128582559/ccs	chr7	-	3712	1	NIC	ENSMUSG00000063535.8	novel	4073	4	NA	NA	5940	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGGTTGCGTCTTTCTT	2962	False	NA	NA	False	NA	NA	NA	7133783	7130071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_7130100_7133800
m54284U_201217_021426/128712954/ccs	chr17	-	156	1	Intergenic	novelGene_8414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAGAGACTGAGTGAGCA	6178	False	NA	NA	False	NA	NA	NA	24701461	24701305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24701300_24701500
m54284U_201217_021426/128779087/ccs	chr11	-	2743	11	NNC	ENSMUSG00000041654.16	novel	2781	11	NA	NA	-3362	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_10	153.16295243955	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	4384	False	NA	-2	True	AATAAA	-19	NA	113459967	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452948_113459778
m54284U_201217_021426/128844471/ccs	chr4	+	231	1	Intergenic	novelGene_1747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATGAAGGATAGCTAAT	NA	False	NA	NA	False	TATAAA	-35	NA	11250892	11251123	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_11250900_11251100
m54284U_201217_021426/128846579/ccs	chr3	+	196	2	Intergenic	novelGene_1502	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	76	junction_1	0	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGGTGAGTCTTGATATG	NA	False	NA	NA	False	NA	NA	NA	88747101	88779032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88747265_88778999
m54284U_201217_021426/128909656/ccs	chr4	-	171	1	Intergenic	novelGene_2394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGAAGAAAATATA	7972	False	NA	NA	False	NA	NA	NA	150193161	150192990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_150193000_150193200
m54284U_201217_021426/128910587/ccs	chr14	-	249	1	Intergenic	novelGene_7368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGAGGGTCACACATCC	NA	False	NA	NA	False	NA	NA	NA	26707572	26707323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26707300_26707600
m54284U_201217_021426/128910783/ccs	chr4	-	155	1	Intergenic	novelGene_2140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTTAAAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	129065785	129065630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129065600_129065800
m54284U_201217_021426/12910648/ccs	chr7	+	185	1	Intergenic	novelGene_4033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAATAACATTGATATATA	3533	False	NA	NA	False	NA	NA	NA	113625134	113625319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_113625100_113625300
m54284U_201217_021426/129107681/ccs	chr11	-	180	1	Intergenic	novelGene_6525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAGTAAAATAG	NA	False	NA	NA	False	NA	NA	NA	121131228	121131048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_121131000_121131200
m54284U_201217_021426/12910841/ccs	chr8	+	189	1	Intergenic	novelGene_4387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTAGAAGTCAACTGT	NA	False	NA	NA	False	NA	NA	NA	86179603	86179792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_86179600_86179800
m54284U_201217_021426/12911591/ccs	chr11	-	199	1	Intergenic	novelGene_6097	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCATCATTATTGT	NA	False	NA	NA	False	NA	NA	NA	79898827	79898628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79898600_79898800
m54284U_201217_021426/129171617/ccs	chr11	-	177	1	Intergenic	novelGene_5986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAGATAAACAAAAACA	NA	False	NA	NA	False	NA	NA	NA	73053750	73053573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_73053600_73053800
m54284U_201217_021426/129303109/ccs	chr2	-	203	1	Intergenic	novelGene_598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGCAGGAAAACACGAC	NA	False	NA	NA	False	NA	NA	NA	16076376	16076173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_16076200_16076400
m54284U_201217_021426/129304501/ccs	chr18	-	190	1	Intergenic	novelGene_8815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTGCTAGGAACT	NA	False	NA	NA	False	NA	NA	NA	11832428	11832238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_11832200_11832400
m54284U_201217_021426/129304944/ccs	chr8	+	173	1	Intergenic	novelGene_4425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCTAAAAAAATGGAAC	NA	False	NA	NA	False	NA	NA	NA	102314078	102314251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_102314100_102314300
m54284U_201217_021426/129368124/ccs	chr15	+	185	1	Intergenic	novelGene_7738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGGTTTTAGATCTTA	NA	False	NA	NA	False	NA	NA	NA	61818905	61819090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_61818900_61819100
m54284U_201217_021426/129370057/ccs	chr7	+	289	1	Genic_Genomic	ENSMUSG00000108483.2	novel	NA	NA	NA	NA	4800	118	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTCGAGGCCAGCCTG	NA	False	NA	NA	False	NA	NA	NA	127038393	127038682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_127038400_127038700
m54284U_201217_021426/129434805/ccs	chr13	+	182	1	Intergenic	novelGene_7113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTGAAAGATCTCTTTAAG	NA	False	NA	NA	False	NA	NA	NA	55876832	55877014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55876800_55877000
m54284U_201217_021426/129500713/ccs	chr2	-	143	1	Intergenic	novelGene_1285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAGAGTCTGGG	NA	False	NA	NA	False	NA	NA	NA	171725023	171724880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_171724900_171725000
m54284U_201217_021426/129501285/ccs	chr16	+	3587	7	ISM	ENSMUSG00000000884.18	ENSMUST00000000904.15	1412	8	156	-2137	0	0	3prime_fragment	FALSE	canonical	3	36	junction_3	102.412021863755	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTAGACTTGATTTGTCC	NA	False	NA	NA	False	NA	NA	NA	18317689	18385429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_+_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18366842_18366942_18371116_18371333_18382784
m54284U_201217_021426/129631645/ccs	chr8	-	316	1	Intergenic	novelGene_4214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGAAGGTCGGCGAG	NA	False	NA	NA	False	NA	NA	NA	14906410	14906094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_14906100_14906400
m54284U_201217_021426/129632925/ccs	chr16	-	6745	1	Antisense	novelGene_ENSMUSG00000089774.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGAAAGGTATTGTTTT	NA	False	NA	NA	False	NA	NA	NA	91884475	91877730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_91877700_91884500
m54284U_201217_021426/129695897/ccs	chr6	-	200	1	Intergenic	novelGene_3534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAACAAAAAATCCAAAACAA	NA	False	NA	NA	False	NA	NA	NA	128697400	128697200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128697200_128697400
m54284U_201217_021426/129763484/ccs	chr4	-	234	1	Intergenic	novelGene_2232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACACAGGCTGGGGAGAT	NA	False	NA	NA	False	NA	NA	NA	134051453	134051219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_134051200_134051500
m54284U_201217_021426/129893305/ccs	chr4	+	161	1	Intergenic	novelGene_1830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAACCAAATAGCT	7763	False	NA	NA	False	NA	NA	NA	43516637	43516798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_43516600_43516800
m54284U_201217_021426/129894110/ccs	chr2	-	183	1	Intergenic	novelGene_765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTACCTACTGGTTTAT	NA	False	NA	NA	False	NA	NA	NA	37315154	37314971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_37315000_37315200
m54284U_201217_021426/129894951/ccs	chr8	+	1894	1	Genic_Genomic	ENSMUSG00000005410.7	novel	NA	NA	NA	NA	5221	1742	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTAGATGTAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	75854915	75856809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr8_+_75854900_75856800
m54284U_201217_021426/129958610/ccs	chr12	-	234	1	Intergenic	novelGene_6735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGTTCACCAATACT	NA	False	NA	NA	False	NA	NA	NA	76765261	76765027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_76765000_76765300
m54284U_201217_021426/129958812/ccs	chr4	-	180	1	Intergenic	novelGene_2096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCTTCTGAGTACATTAC	NA	False	NA	NA	False	NA	NA	NA	124372970	124372790	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_124372800_124373000
m54284U_201217_021426/130089459/ccs	chr14	+	213	1	Intergenic	novelGene_7427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAAGCA	NA	False	NA	NA	False	NA	NA	NA	49473862	49474075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_49473900_49474100
m54284U_201217_021426/130091260/ccs	chr8	-	178	1	Intergenic	novelGene_4415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGGGGGGCTTCTTCTA	NA	False	NA	NA	False	NA	NA	NA	95755440	95755262	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_95755300_95755400
m54284U_201217_021426/130155160/ccs	chr10	-	172	1	Intergenic	novelGene_5540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATCTTTCTTCTGTTGT	NA	False	NA	1	True	NA	NA	NA	112867656	112867484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_112867500_112867700
m54284U_201217_021426/130156604/ccs	chr5	-	310	1	Intergenic	novelGene_2837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCACACACACATACATAT	NA	False	NA	NA	False	NA	NA	NA	120352280	120351970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_120352000_120352300
m54284U_201217_021426/130220076/ccs	chr17	+	235	1	Intergenic	novelGene_8756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAAAAGGGCATAGTTAG	NA	False	NA	NA	False	NA	NA	NA	83963497	83963732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_83963500_83963700
m54284U_201217_021426/130222585/ccs	chr4	-	177	1	Intergenic	novelGene_2082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	8535	False	NA	NA	False	NA	NA	NA	122952916	122952739	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_122952700_122952900
m54284U_201217_021426/130222906/ccs	chr16	-	202	1	Intergenic	novelGene_8197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAGTATGTTTTGCTGGG	NA	False	NA	NA	False	AAGAAA	-3	NA	31813653	31813451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31813500_31813700
m54284U_201217_021426/130288307/ccs	chr3	+	185	1	Intergenic	novelGene_1714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTTTGATGGTGATTT	NA	False	NA	NA	False	NA	NA	NA	145414241	145414426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_145414200_145414400
m54284U_201217_021426/130288315/ccs	chr8	-	170	1	Intergenic	novelGene_4372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGAGAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	85352568	85352398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_85352400_85352600
m54284U_201217_021426/130351795/ccs	chr17	+	195	1	Intergenic	novelGene_8542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAGGCCAGTCAGTTCTA	1450	False	NA	NA	False	NA	NA	NA	34327118	34327313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_34327100_34327300
m54284U_201217_021426/130352997/ccs	chr3	+	181	1	Intergenic	novelGene_1555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAATATTCAATTCC	NA	False	NA	NA	False	NA	NA	NA	94558553	94558734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_94558600_94558700
m54284U_201217_021426/130417577/ccs	chr11	+	5196	2	Intergenic	novelGene_5856	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	1950	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTAGCTGGGTAAGGGGG	NA	False	NA	NA	False	NA	NA	NA	57445632	57450922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_57450386_57450479
m54284U_201217_021426/130418182/ccs	chr5	+	169	1	Intergenic	novelGene_3000	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAGAAAAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	137589228	137589397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137589200_137589400
m54284U_201217_021426/130419064/ccs	chr1	+	191	1	Intergenic	novelGene_118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCCTTAGTAGGTTTTGC	1002	False	NA	NA	False	NA	NA	NA	52152013	52152204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_52152000_52152200
m54284U_201217_021426/13044084/ccs	chr13	-	4943	1	Intergenic	novelGene_6954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	8816938	8811995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_8812000_8816900
m54284U_201217_021426/130483411/ccs	chr9	-	175	1	Intergenic	novelGene_4938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAAACTCACTGTTAGT	NA	False	NA	NA	False	NA	NA	NA	72731751	72731576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72731600_72731800
m54284U_201217_021426/130484062/ccs	chr7	-	1819	3	NIC	ENSMUSG00000061787.16	novel	494	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	8882	junction_2	2248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTATTGTTCTTG	NA	False	NA	-10	True	AATAAA	-12	NA	80995002	80992480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_80993549_80994058_80994757_80994949
m54284U_201217_021426/130547757/ccs	chr13	-	185	1	Intergenic	novelGene_7107	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAACCACGAACAGTTTT	NA	False	NA	NA	False	NA	NA	NA	55745711	55745526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55745500_55745700
m54284U_201217_021426/130679087/ccs	chr6	-	223	1	Intergenic	novelGene_3525	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTTAATCGTTTCCAG	9014	False	NA	NA	False	NA	NA	NA	128291820	128291597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128291600_128291800
m54284U_201217_021426/130680971/ccs	chr12	-	152	1	Intergenic	novelGene_6645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATATAAATAAATAAA	9093	False	NA	NA	False	NA	NA	NA	54853993	54853841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_54853800_54854000
m54284U_201217_021426/130744641/ccs	chr19	-	181	1	Intergenic	novelGene_9192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAACATCTCAGGGT	2859	False	NA	NA	False	NA	NA	NA	25000063	24999882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_24999900_25000100
m54284U_201217_021426/130745481/ccs	chr12	+	1811	1	FSM	ENSMUSG00000021241.8	ENSMUST00000222136.2	416	1	0	-1395	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTATCGTGTTTTCAAT	NA	False	NA	15	True	TATAAA	-18	NA	84820051	84821862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_84820100_84821900
m54284U_201217_021426/130811897/ccs	chrX	+	176	1	Intergenic	novelGene_9604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGATTATATTTG	1474	False	NA	NA	False	NA	NA	NA	105081693	105081869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_105081700_105081900
m54284U_201217_021426/130876821/ccs	chr2	-	188	1	Intergenic	novelGene_1053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTTTTAAAAAGTGGAAA	6921	False	NA	-11	True	NA	NA	NA	126935069	126934881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_126934900_126935100
m54284U_201217_021426/130941551/ccs	chr11	+	3055	1	Genic_Genomic	ENSMUSG00000007739.11	novel	NA	NA	NA	NA	1260	2468	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAATCTACAAGATCC	NA	False	NA	29	True	AATAAA	-30	NA	22953193	22956248	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_22953200_22956200
m54284U_201217_021426/131/ccs	chr1	-	201	1	Intergenic	novelGene_514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTTAGAAATTTGGAAA	NA	False	NA	NA	False	NA	NA	NA	180627418	180627217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_180627200_180627400
m54284U_201217_021426/131072026/ccs	chr11	-	156	1	ISM	ENSMUSG00000046879.8	ENSMUST00000049519.4	2259	3	5838	136	5838	-132	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48756363	48756207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_48756200_48756400
m54284U_201217_021426/13107389/ccs	chr15	-	227	2	Antisense	novelGene_ENSMUSG00000033047.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	313	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCCTGCCTGGCGGTGGT	NA	False	NA	NA	False	NA	NA	NA	78972091	78968972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_78969151_78972042
m54284U_201217_021426/13108276/ccs	chr7	-	188	1	Intergenic	novelGene_3717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGCTAAAAAGAAACCAA	NA	False	NA	NA	False	NA	NA	NA	26972935	26972747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_26972700_26972900
m54284U_201217_021426/13109172/ccs	chr8	+	204	1	Intergenic	novelGene_4205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGCAGTCAGTGCTCTT	1040	False	NA	NA	False	NA	NA	NA	13201998	13202202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_13202000_13202200
m54284U_201217_021426/131137999/ccs	chr12	-	188	1	Intergenic	novelGene_6589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTCCTAAAGAGAGGTC	NA	False	NA	NA	False	NA	NA	NA	21498527	21498339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_21498300_21498500
m54284U_201217_021426/131204021/ccs	chr10	-	182	1	Intergenic	novelGene_5581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACATATTATTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	121170519	121170337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_121170300_121170500
m54284U_201217_021426/131205396/ccs	chr4	-	204	1	Intergenic	novelGene_2142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCGCTCTCCAGCCCGC	NA	False	NA	NA	False	NA	NA	NA	129149792	129149588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129149600_129149800
m54284U_201217_021426/131205662/ccs	chr1	-	156	1	Intergenic	novelGene_168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAAACTTTAGAGTACAG	NA	False	NA	NA	False	NA	NA	NA	67709684	67709528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_67709500_67709700
m54284U_201217_021426/131269039/ccs	chr4	-	183	1	Intergenic	novelGene_2162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACAACATTGGCTGC	NA	False	NA	NA	False	NA	NA	NA	129699970	129699787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129699800_129700000
m54284U_201217_021426/131269582/ccs	chr5	+	194	1	Antisense	novelGene_ENSMUSG00000004642.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGGAATCTTGGTTT	6692	False	NA	NA	False	NA	NA	NA	33806274	33806468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_33806300_33806500
m54284U_201217_021426/131269965/ccs	chr9	-	145	1	Intergenic	novelGene_4957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTAAATGTATTTCA	NA	False	NA	NA	False	NA	NA	NA	77659701	77659556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_77659600_77659700
m54284U_201217_021426/131334647/ccs	chr15	-	193	1	Intergenic	novelGene_7792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAACTCTTCTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	77231170	77230977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_77231000_77231200
m54284U_201217_021426/131401593/ccs	chr11	+	197	1	Intergenic	novelGene_5933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTCAAGTCTTTTATA	NA	False	NA	NA	False	NA	NA	NA	68828006	68828203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68828000_68828200
m54284U_201217_021426/131466466/ccs	chr17	-	177	1	Intergenic	novelGene_8761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAATAGAATT	NA	False	NA	NA	False	NA	NA	NA	84517578	84517401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_84517400_84517600
m54284U_201217_021426/131533296/ccs	chr3	-	202	1	Intergenic	novelGene_1667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTACTGTTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	122443167	122442965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_122443000_122443200
m54284U_201217_021426/131598057/ccs	chr2	-	157	1	Intergenic	novelGene_1300	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	176764840	176764683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_176764700_176764800
m54284U_201217_021426/131598390/ccs	chr11	+	2548	1	Intergenic	novelGene_6151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACCTAAACAACAAATTA	NA	False	NA	NA	False	NA	NA	NA	85976208	85978756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_85976200_85978800
m54284U_201217_021426/131727474/ccs	chr18	-	198	1	Intergenic	novelGene_8928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCATTTTGCTCAACAT	NA	False	NA	NA	False	TTTAAA	-11	NA	38810177	38809979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_38810000_38810200
m54284U_201217_021426/131728188/ccs	chr12	-	155	1	Intergenic	novelGene_6727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCCTGTTGTAATGTTGC	NA	False	NA	NA	False	NA	NA	NA	76125046	76124891	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_76124900_76125000
m54284U_201217_021426/131728993/ccs	chr2	+	194	1	Intergenic	novelGene_1133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACTCACCTAATATACA	2755	False	NA	NA	False	NA	NA	NA	153150242	153150436	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_153150200_153150400
m54284U_201217_021426/13174494/ccs	chr7	+	245	1	Intergenic	novelGene_4092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTAAAAACTTGATGA	NA	False	NA	NA	False	ATTAAA	-5	NA	126347311	126347556	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_126347300_126347600
m54284U_201217_021426/131792934/ccs	chr9	-	195	1	Intergenic	novelGene_4989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGACAGCTATAGTGG	4367	False	NA	NA	False	NA	NA	NA	88375886	88375691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_88375700_88375900
m54284U_201217_021426/131859099/ccs	chr15	+	159	1	Intergenic	novelGene_8018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103118326	103118485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_103118300_103118500
m54284U_201217_021426/131860583/ccs	chr6	+	110	1	Intergenic	novelGene_3539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCCCTGTGTTCAAGAG	NA	False	NA	NA	False	NA	NA	NA	132432268	132432378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_132432300_132432400
m54284U_201217_021426/131861088/ccs	chr11	+	181	1	Intergenic	novelGene_5731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAATACCTCATGTC	NA	False	NA	NA	False	NA	NA	NA	23031369	23031550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_23031400_23031600
m54284U_201217_021426/131861316/ccs	chr7	-	163	1	Intergenic	novelGene_4182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATCTTTGGAAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	144124069	144123906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_144123900_144124100
m54284U_201217_021426/131924752/ccs	chr11	+	246	1	Intergenic	novelGene_6048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACAAAAGGTCACTGG	9722	False	NA	NA	False	NA	NA	NA	77530907	77531153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77530900_77531200
m54284U_201217_021426/131926722/ccs	chr9	-	186	1	Intergenic	novelGene_4816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATACAAGAAAATACAGTA	NA	False	NA	NA	False	NA	NA	NA	58497771	58497585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58497600_58497800
m54284U_201217_021426/131989974/ccs	chr2	-	134	1	Intergenic	novelGene_913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAATTAAATTAA	6643	False	NA	NA	False	NA	NA	NA	90484441	90484307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_90484300_90484400
m54284U_201217_021426/131990949/ccs	chr16	-	2801	1	NIC	ENSMUSG00000022978.12	novel	1333	5	NA	NA	5027	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGGTTTTTTTTTT	NA	False	NA	0	True	AATAAA	-25	NA	90519000	90516199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_90516200_90519000
m54284U_201217_021426/131992062/ccs	chr17	-	188	1	Intergenic	novelGene_8661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGTAATAATGTA	NA	False	NA	NA	False	NA	NA	NA	57049496	57049308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_57049300_57049500
m54284U_201217_021426/132121525/ccs	chr3	-	174	1	Intergenic	novelGene_1489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAGACAAAAACAAAA	1995	False	NA	NA	False	NA	NA	NA	88510617	88510443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88510400_88510600
m54284U_201217_021426/132187188/ccs	chr19	-	215	1	Intergenic	novelGene_9185	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACTAGACTGGATATAG	NA	False	NA	NA	False	NA	NA	NA	23211077	23210862	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_23210900_23211100
m54284U_201217_021426/132253438/ccs	chr3	-	208	1	Intergenic	novelGene_1400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTCTTTAAAAAAAAAAAA	6786	False	NA	NA	False	ATTAAA	-8	NA	51334033	51333825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_51333800_51334000
m54284U_201217_021426/132319570/ccs	chr13	-	183	1	Intergenic	novelGene_7014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTACTCTCCCCCACCCT	NA	False	NA	NA	False	NA	NA	NA	34096966	34096783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_34096800_34097000
m54284U_201217_021426/132448661/ccs	chr4	+	432	1	Intergenic	novelGene_1773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTAATCACTGAGG	NA	False	NA	NA	False	NA	NA	NA	25304362	25304794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_25304400_25304800
m54284U_201217_021426/132516137/ccs	chr2	-	161	1	Intergenic	novelGene_936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	91592635	91592474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91592500_91592600
m54284U_201217_021426/132516338/ccs	chr9	+	202	1	Intergenic	novelGene_4759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTAGGAGATGGGA	NA	False	NA	NA	False	NA	NA	NA	50443580	50443782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_50443600_50443800
m54284U_201217_021426/132582236/ccs	chr8	-	165	1	Intergenic	novelGene_4317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTCTAAGTGTGATCCAA	6441	False	NA	NA	False	NA	NA	NA	70433143	70432978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_70433000_70433100
m54284U_201217_021426/132743/ccs	chr3	+	285	1	FSM	ENSMUSG00000106037.2	ENSMUST00000196114.2	346	1	127	-66	127	66	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGTACCCTTCAAAATAG	NA	False	NA	58	True	NA	NA	NA	119503291	119503576	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_119503300_119503600
m54284U_201217_021426/132841915/ccs	chr6	+	236	1	Intergenic	novelGene_3190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTATAAAGCAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	38193575	38193811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38193600_38193800
m54284U_201217_021426/132841978/ccs	chr9	+	165	1	Intergenic	novelGene_5011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTACTATTATTA	NA	False	NA	NA	False	NA	NA	NA	96143548	96143713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96143500_96143700
m54284U_201217_021426/132909411/ccs	chr11	+	180	1	Intergenic	novelGene_5849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAACAAACAAAGAGC	8531	False	NA	NA	False	NA	NA	NA	54856892	54857072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_54856900_54857100
m54284U_201217_021426/132975188/ccs	chr19	-	5255	1	ISM	ENSMUSG00000040929.18	ENSMUST00000165566.8	9146	18	215967	6	69865	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGAAATGGCTTGGATT	NA	False	NA	-4	True	AATAAA	-20	NA	27744381	27739126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_-_27739100_27744400
m54284U_201217_021426/133104438/ccs	chr12	+	161	1	Intergenic	novelGene_6781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAGTCCTTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	83558526	83558687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_83558500_83558700
m54284U_201217_021426/133301328/ccs	chrX	-	144	1	Intergenic	novelGene_9367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGTCAGAAAATAG	NA	False	NA	NA	False	NA	NA	NA	7850502	7850358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_7850400_7850500
m54284U_201217_021426/133365837/ccs	chrX	-	226	1	Intergenic	novelGene_9375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCATTTGTTGTTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	8104839	8104613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_8104600_8104800
m54284U_201217_021426/133366310/ccs	chr19	-	165	1	Intergenic	novelGene_9326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTAAAAAAAAAAAAGT	1804	False	NA	NA	False	NA	NA	NA	47049065	47048900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_47048900_47049100
m54284U_201217_021426/133434170/ccs	chr3	+	343	1	Intergenic	novelGene_1694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATTAAAAAGAGCAGCAT	NA	False	NA	NA	False	NA	NA	NA	135418517	135418860	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_135418500_135418900
m54284U_201217_021426/133498635/ccs	chr4	-	186	1	Intergenic	novelGene_2399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTCCCAGTGCTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	150392155	150391969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_150392000_150392200
m54284U_201217_021426/133499235/ccs	chr2	+	172	1	Intergenic	novelGene_1221	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTTTGCCA	52	False	NA	NA	False	NA	NA	NA	164857838	164858010	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_164857800_164858000
m54284U_201217_021426/133565186/ccs	chr19	+	189	1	Intergenic	novelGene_9113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCTTTTAAAGAAAGTC	NA	False	NA	NA	False	NA	NA	NA	6028742	6028931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6028700_6028900
m54284U_201217_021426/133628986/ccs	chrX	-	204	1	Intergenic	novelGene_9603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATAAAATGATAAAGTGA	7623	False	NA	NA	False	NA	NA	NA	105062490	105062286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_105062300_105062500
m54284U_201217_021426/133694542/ccs	chr13	+	4669	1	Intergenic	novelGene_7138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTCTGTTGATTATT	NA	False	NA	2	True	ATTAAA	-19	NA	62384620	62389289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62384600_62389300
m54284U_201217_021426/133696097/ccs	chr1	+	177	1	Intergenic	novelGene_286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAAAGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	127651587	127651764	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_127651600_127651800
m54284U_201217_021426/133826654/ccs	chr10	-	198	1	Intergenic	novelGene_5356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACCCAGCACAAAAATAAAA	2141	False	NA	NA	False	NA	NA	NA	62762260	62762062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62762100_62762300
m54284U_201217_021426/133891257/ccs	chr12	+	229	1	Intergenic	novelGene_6793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGAGCTCTTCTTGG	5612	False	NA	NA	False	AATAAA	-13	NA	84015104	84015333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_84015100_84015300
m54284U_201217_021426/133892486/ccs	chrX	-	220	1	Intergenic	novelGene_9385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATGGTGCTCTAGGTT	NA	False	NA	NA	False	AATAAA	-2	NA	12467540	12467320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_12467300_12467500
m54284U_201217_021426/133957721/ccs	chr6	-	738	1	FSM	ENSMUSG00000044211.10	ENSMUST00000056948.10	537	1	-20	-181	-20	181	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAATTTATGTTTTATA	NA	False	NA	NA	False	AATAAA	-17	NA	48502044	48501306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_48501300_48502000
m54284U_201217_021426/134089093/ccs	chr5	-	179	1	Intergenic	novelGene_2650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATGAAGAACAGTACGTA	NA	False	NA	NA	False	NA	NA	NA	88846445	88846266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_88846300_88846400
m54284U_201217_021426/134154219/ccs	chr15	-	186	1	Intergenic	novelGene_7655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTATATTAGGAATACT	NA	False	NA	NA	False	NA	NA	NA	23919896	23919710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_23919700_23919900
m54284U_201217_021426/134283937/ccs	chr7	-	848	1	Intergenic	novelGene_3816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATCAAAAAAAAAAAAA	1106	False	NA	NA	False	NA	NA	NA	42866129	42865281	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_42865300_42866100
m54284U_201217_021426/134349434/ccs	chr5	+	174	1	Intergenic	novelGene_2539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATGACCAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	33740015	33740189	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_33740000_33740200
m54284U_201217_021426/134417135/ccs	chr8	-	175	1	Intergenic	novelGene_4230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAATATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	23895695	23895520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_23895500_23895700
m54284U_201217_021426/134547229/ccs	chr7	-	3141	2	Fusion	ENSMUSG00000078817.5_ENSMUSG00000106340.3	novel	6928	10	NA	NA	-2320	793	multi-exon	FALSE	canonical	3	11	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTCTGAGAGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	3269689	3266518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr7_-_3268624_3268653
m54284U_201217_021426/134678621/ccs	chr18	-	195	1	Intergenic	novelGene_8804	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACTTCAAAACGGAGTC	NA	False	NA	NA	False	NA	NA	NA	6807378	6807183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_6807200_6807400
m54284U_201217_021426/134743693/ccs	chr11	-	181	1	Intergenic	novelGene_5959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAACACATAAGAACTAG	NA	False	NA	NA	False	NA	NA	NA	70309141	70308960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_70309000_70309100
m54284U_201217_021426/134744861/ccs	chr11	+	276	1	Intergenic	novelGene_6018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCTCCCACTGAAACAC	NA	False	NA	NA	False	NA	NA	NA	75678579	75678855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_75678600_75678900
m54284U_201217_021426/134807875/ccs	chr13	-	173	1	Intergenic	novelGene_6971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	13850046	13849873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_13849900_13850000
m54284U_201217_021426/135005686/ccs	chr2	-	1471	1	FSM	ENSMUSG00000082321.4	ENSMUST00000122112.2	639	1	-191	-641	-191	641	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACCTATGATTCTGGCTG	6591	False	NA	NA	False	NA	NA	NA	156189951	156188480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_156188500_156190000
m54284U_201217_021426/135006952/ccs	chr9	+	187	1	Intergenic	novelGene_4847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATCTTTCTAGCCTTAAT	NA	False	NA	NA	False	NA	NA	NA	62714813	62715000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_62714800_62715000
m54284U_201217_021426/13501097/ccs	chr11	+	204	1	Intergenic	novelGene_6339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATATCTGAGTGGGCTG	9730	False	NA	NA	False	NA	NA	NA	101458175	101458379	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101458200_101458400
m54284U_201217_021426/13501526/ccs	chr15	+	181	1	Intergenic	novelGene_7876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAGAACTCTG	NA	False	NA	NA	False	NA	NA	NA	83994055	83994236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_83994100_83994200
m54284U_201217_021426/135137450/ccs	chr10	+	186	1	Intergenic	novelGene_5449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGATTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	80441524	80441710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80441500_80441700
m54284U_201217_021426/135137866/ccs	chr1	-	196	1	FSM	ENSMUSG00000022995.17	ENSMUST00000195461.2	5962	1	625	5141	625	-5141	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAAAGTGAACAGAA	NA	False	NA	NA	False	NA	NA	NA	181767525	181767329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_181767300_181767500
m54284U_201217_021426/135203366/ccs	chr11	-	2570	2	NNC	ENSMUSG00000025144.18	novel	692	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	32	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	False	NA	-3	True	AATAAA	-18	NA	120604564	120601768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120602303_120602528
m54284U_201217_021426/135266999/ccs	chr13	+	156	1	Intergenic	novelGene_6950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAACAATAGGAATCAA	NA	False	NA	NA	False	NA	NA	NA	3648062	3648218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_3648100_3648200
m54284U_201217_021426/135267058/ccs	chr8	+	255	1	Intergenic	novelGene_4528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACTTGAGCCAGGCAGT	NA	False	NA	NA	False	NA	NA	NA	117608841	117609096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_117608800_117609100
m54284U_201217_021426/135268413/ccs	chr15	-	5491	6	NIC	ENSMUSG00000053411.17	novel	2899	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	156	junction_1	131.217376898031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTGTGTGTCTGGTTG	NA	False	NA	-7	True	ATTAAA	-24	NA	79855320	79800007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79802252_79802477_79802678_79802953_79805640_79807672_79807739_79814786_79814831_79855069
m54284U_201217_021426/135332450/ccs	chr9	-	193	1	Intergenic	novelGene_4784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGCTTCCTACCGTTCA	9969	False	NA	NA	False	NA	NA	NA	55140023	55139830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_55139800_55140000
m54284U_201217_021426/135594827/ccs	chr11	+	173	1	Intergenic	novelGene_5911	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCTTGACAGTTTT	NA	False	NA	NA	False	NA	NA	NA	62790020	62790193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_62790000_62790200
m54284U_201217_021426/135659853/ccs	chr14	-	5361	1	Intergenic	novelGene_7593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	NA	False	NA	NA	False	NA	NA	NA	112609032	112603671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_112603700_112609000
m54284U_201217_021426/135661033/ccs	chr6	-	181	1	Intergenic	novelGene_3380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAGGAAGGGAG	8540	False	NA	NA	False	NA	NA	NA	88066497	88066316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_88066300_88066500
m54284U_201217_021426/13566187/ccs	chr6	+	183	1	Intergenic	novelGene_3366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGTCAGACAAGGTGGT	3089	False	NA	NA	False	NA	NA	NA	86490598	86490781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_86490600_86490800
m54284U_201217_021426/13566709/ccs	chr6	-	182	1	Intergenic	novelGene_3397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAAAGCATACAAC	NA	False	NA	NA	False	NA	NA	NA	94269964	94269782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_94269800_94270000
m54284U_201217_021426/135858166/ccs	chr12	-	177	1	Intergenic	novelGene_6877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCGGGGGGGGGGAGGT	NA	False	NA	NA	False	NA	NA	NA	105807105	105806928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_105806900_105807100
m54284U_201217_021426/135924489/ccs	chr12	+	189	1	Intergenic	novelGene_6541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCAGAGACCGGAAGACC	NA	False	NA	NA	False	NA	NA	NA	4151672	4151861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_4151700_4151900
m54284U_201217_021426/135987807/ccs	chr2	+	183	1	Intergenic	novelGene_1100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTAAAAAAAAAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	144199539	144199722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_144199500_144199700
m54284U_201217_021426/136053933/ccs	chr11	-	473	1	Intergenic	novelGene_6430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGACCTGGCATGGATT	NA	False	NA	0	True	NA	NA	NA	108902944	108902471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_108902500_108902900
m54284U_201217_021426/136055605/ccs	chr2	-	175	1	Intergenic	novelGene_647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	26744148	26743973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_26744000_26744100
m54284U_201217_021426/136185414/ccs	chr1	-	185	1	Genic_Genomic	ENSMUSG00000005501.15	novel	NA	NA	NA	NA	1797	7	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCCAGAGAAGCTT	NA	False	NA	NA	False	NA	NA	NA	87877598	87877413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_-_87877400_87877600
m54284U_201217_021426/136250715/ccs	chr4	-	219	1	Intergenic	novelGene_2199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGGTACTGTGTGCTAC	NA	False	NA	NA	False	NA	NA	NA	132409918	132409699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_132409700_132409900
m54284U_201217_021426/136251153/ccs	chr15	-	158	1	Intergenic	novelGene_7848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAATTTCCAGGTCAGC	NA	False	NA	NA	False	NA	NA	NA	81593344	81593186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81593200_81593300
m54284U_201217_021426/136315374/ccs	chr11	+	219	1	Intergenic	novelGene_6148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTTGGGGTCTTTTGT	NA	False	NA	NA	False	NA	NA	NA	85393982	85394201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_85394000_85394200
m54284U_201217_021426/136317489/ccs	chr2	-	176	1	Intergenic	novelGene_852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTCCTAACC	NA	False	NA	NA	False	NA	NA	NA	71793791	71793615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_71793600_71793800
m54284U_201217_021426/136380801/ccs	chr5	-	190	1	Intergenic	novelGene_2983	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCAAGCTGAGCAAGCC	NA	False	NA	NA	False	NA	NA	NA	135787617	135787427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135787400_135787600
m54284U_201217_021426/136382134/ccs	chr8	+	174	1	Intergenic	novelGene_4344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAAAGGTGGGCT	NA	False	NA	NA	False	NA	NA	NA	73410548	73410722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_73410500_73410700
m54284U_201217_021426/136448632/ccs	chr15	-	178	1	Intergenic	novelGene_7665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAATAT	NA	False	NA	NA	False	NA	NA	NA	29283693	29283515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_29283500_29283700
m54284U_201217_021426/136511825/ccs	chr7	-	193	1	Intergenic	novelGene_3703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAAAGGGGGTGTCAGGG	NA	False	NA	NA	False	NA	NA	NA	24479778	24479585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_24479600_24479800
m54284U_201217_021426/136839364/ccs	chr6	-	190	1	Intergenic	novelGene_3471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATTACCATAAACAGATC	NA	False	NA	NA	False	NA	NA	NA	121483029	121482839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_121482800_121483000
m54284U_201217_021426/136906131/ccs	chr10	+	176	1	Intergenic	novelGene_5463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	81056728	81056904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_81056700_81056900
m54284U_201217_021426/136970496/ccs	chr10	-	178	1	Intergenic	novelGene_5481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACAGTTCT	4209	False	NA	NA	False	NA	NA	NA	84523502	84523324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_84523300_84523500
m54284U_201217_021426/136972262/ccs	chr5	-	190	1	Genic_Genomic	ENSMUSG00000038593.19	novel	NA	NA	NA	NA	13653	12	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCTGGAGCTGCAGCT	NA	False	NA	NA	False	NA	NA	NA	122376088	122375898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_-_122375900_122376100
m54284U_201217_021426/137038075/ccs	chr1	-	182	1	Intergenic	novelGene_223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCCTGGCACACCGTTA	63	False	NA	NA	False	NA	NA	NA	86021780	86021598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_86021600_86021800
m54284U_201217_021426/137101565/ccs	chr16	+	193	1	Intergenic	novelGene_8041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGATTCTATTTTGAAACA	3240	False	NA	NA	False	NA	NA	NA	8474025	8474218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_8474000_8474200
m54284U_201217_021426/137102866/ccs	chr11	-	197	1	Intergenic	novelGene_6526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGTCTTGCAGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	121208632	121208435	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_121208400_121208600
m54284U_201217_021426/137167346/ccs	chr15	-	192	1	Intergenic	novelGene_7871	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGATGAGGAGGAGATGG	NA	False	NA	NA	False	NA	NA	NA	83210639	83210447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_83210400_83210600
m54284U_201217_021426/137234793/ccs	chr6	-	181	1	Intergenic	novelGene_3482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGCTTGAGATGACTAA	NA	False	NA	NA	False	NA	NA	NA	122658391	122658210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122658200_122658400
m54284U_201217_021426/137363662/ccs	chr12	-	2875	11	NNC	ENSMUSG00000021189.12	novel	5363	11	NA	NA	0	1794	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	96.515076542476	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGTGTGCTGCCTGATG	NA	False	NA	NA	False	ATTAAA	-16	NA	101924407	101887545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_101889464_101892742_101892841_101899226_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101914533_101914695_101924392
m54284U_201217_021426/137430167/ccs	chr2	-	187	1	Intergenic	novelGene_1234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAATGAAAAAGAGAAA	NA	False	NA	NA	False	AATAAA	-4	NA	166199199	166199012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166199000_166199200
m54284U_201217_021426/137431899/ccs	chr7	-	226	1	Intergenic	novelGene_4069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTACAACTCCTCACCAT	NA	False	NA	NA	False	NA	NA	NA	122566982	122566756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_122566800_122567000
m54284U_201217_021426/137497068/ccs	chrX	+	185	1	Intergenic	novelGene_9428	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTTAAAAAAAAGAATAT	6439	False	NA	NA	False	NA	NA	NA	37587917	37588102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_37587900_37588100
m54284U_201217_021426/13762994/ccs	chr1	-	187	1	Intergenic	novelGene_312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGACTGTTCTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	132022134	132021947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_132021900_132022100
m54284U_201217_021426/13765426/ccs	chr19	-	186	1	Intergenic	novelGene_9360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAGCAAATGAAAGATTT	NA	False	NA	NA	False	NA	NA	NA	61170587	61170401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_61170400_61170600
m54284U_201217_021426/137692757/ccs	chr17	+	178	1	Intergenic	novelGene_8705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATGTACAGAGACGT	NA	False	NA	NA	False	NA	NA	NA	71134749	71134927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71134700_71134900
m54284U_201217_021426/137693899/ccs	chr1	-	149	1	Intergenic	novelGene_120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGTTTAGAATAATGTAC	NA	False	NA	NA	False	AATAAA	-8	NA	52343973	52343824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_52343800_52344000
m54284U_201217_021426/137759256/ccs	chr7	+	177	1	Intergenic	novelGene_4181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	144121733	144121910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_144121700_144121900
m54284U_201217_021426/1377798/ccs	chr2	+	202	1	Intergenic	novelGene_564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACAGGGTAAAAATTATAT	NA	False	NA	NA	False	NA	NA	NA	3362299	3362501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_3362300_3362500
m54284U_201217_021426/1377913/ccs	chr17	-	324	1	Intergenic	novelGene_8736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATACAAAAA	NA	False	NA	NA	False	NA	NA	NA	80323984	80323660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_80323700_80324000
m54284U_201217_021426/137823702/ccs	chr9	-	171	1	Intergenic	novelGene_4758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	50078006	50077835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_50077800_50078000
m54284U_201217_021426/137953349/ccs	chr15	-	188	1	Intergenic	novelGene_7893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGACCTTTCCCAAGGGTTC	9134	False	NA	NA	False	NA	NA	NA	86042158	86041970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_86042000_86042200
m54284U_201217_021426/137954244/ccs	chr11	+	223	1	Intergenic	novelGene_6131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAAGCTAATTCTTTCTC	NA	False	NA	NA	False	NA	NA	NA	84401669	84401892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_84401700_84401900
m54284U_201217_021426/137955516/ccs	chr7	-	180	1	Intergenic	novelGene_3931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTTTCAAGTTTT	2455	False	NA	NA	False	NA	NA	NA	81370032	81369852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_81369900_81370000
m54284U_201217_021426/138019480/ccs	chr6	+	182	1	Intergenic	novelGene_3486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGGTTCACACTTTGAGTC	NA	False	NA	NA	False	NA	NA	NA	122734439	122734621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_122734400_122734600
m54284U_201217_021426/138020206/ccs	chr11	+	183	1	Intergenic	novelGene_6081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTACCACCTCCCCCA	NA	False	NA	NA	False	NA	NA	NA	79217169	79217352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79217200_79217400
m54284U_201217_021426/138085664/ccs	chr19	+	3601	1	NIC	ENSMUSG00000036372.15	novel	606	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGCCTCATGTCCATTC	4181	False	NA	27	True	AATAAA	-16	NA	10181581	10185182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_10181600_10185200
m54284U_201217_021426/138085683/ccs	chr5	+	158	1	Intergenic	novelGene_2614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAATTAATTAATTAATTA	NA	False	NA	NA	False	NA	NA	NA	73378541	73378699	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_73378500_73378700
m54284U_201217_021426/138086129/ccs	chr9	-	197	1	Intergenic	novelGene_5025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAACCTTAAAGA	NA	False	NA	NA	False	NA	NA	NA	98438532	98438335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_98438300_98438500
m54284U_201217_021426/138086382/ccs	chr8	+	3201	1	NIC	ENSMUSG00000033751.6	novel	2494	2	NA	NA	760	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATATATACTTTCTC	3434	False	NA	NA	False	NA	NA	NA	85558910	85562111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_85558900_85562100
m54284U_201217_021426/138149901/ccs	chr3	-	1258	1	Intergenic	novelGene_1696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTTGC	NA	False	NA	NA	False	AATGAA	-40	NA	136429288	136428030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_136428000_136429300
m54284U_201217_021426/138149938/ccs	chr6	-	176	1	Intergenic	novelGene_3350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAATGCAATTTGTAA	3642	False	NA	NA	False	NA	NA	NA	83903523	83903347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_83903300_83903500
m54284U_201217_021426/138152424/ccs	chrX	-	199	1	Intergenic	novelGene_9425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATAATTTTGTGCTTGG	NA	False	NA	NA	False	NA	NA	NA	36385161	36384962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_36385000_36385200
m54284U_201217_021426/138152694/ccs	chr7	+	169	1	Intergenic	novelGene_3682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACTTGCTACT	2625	False	NA	NA	False	NA	NA	NA	19006993	19007162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_19007000_19007200
m54284U_201217_021426/138280968/ccs	chr13	-	178	1	Intergenic	novelGene_7056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTAGAAAGTAGAATGTG	NA	False	NA	NA	False	NA	NA	NA	48718339	48718161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_48718200_48718300
m54284U_201217_021426/13830358/ccs	chr15	-	186	1	Intergenic	novelGene_7924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGATTCACAAAGGTT	3360	False	NA	NA	False	NA	NA	NA	96612057	96611871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_96611900_96612100
m54284U_201217_021426/13830933/ccs	chr6	-	207	1	Intergenic	novelGene_3294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCCAACTCCTTTCAGC	NA	False	NA	NA	False	NA	NA	NA	57726869	57726662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_57726700_57726900
m54284U_201217_021426/138349266/ccs	chr9	-	190	1	Intergenic	novelGene_5050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGTCAGCTCCTATAAA	NA	False	NA	NA	False	NA	NA	NA	102983122	102982932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_102982900_102983100
m54284U_201217_021426/138543402/ccs	chr6	-	241	1	Intergenic	novelGene_3586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCGTGGTAGTACATG	NA	False	NA	NA	False	NA	NA	NA	148863902	148863661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148863700_148863900
m54284U_201217_021426/138676987/ccs	chr8	+	180	1	ISM	ENSMUSG00000110547.2	ENSMUST00000212751.2	1895	2	3729	439	3729	-439	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTTTTTAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	124626740	124626920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_+_124626700_124626900
m54284U_201217_021426/138872879/ccs	chr11	-	6244	1	NIC	ENSMUSG00000020142.13	novel	3926	8	NA	NA	24236	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTAACGTGTTTTTC	NA	False	NA	-5	True	NA	NA	NA	20258448	20252204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_20252200_20258400
m54284U_201217_021426/138938533/ccs	chr15	+	183	1	Intergenic	novelGene_7802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTACTTCACAGAGC	NA	False	NA	NA	False	NA	NA	NA	78751497	78751680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_78751500_78751700
m54284U_201217_021426/13894738/ccs	chr14	-	193	1	Intergenic	novelGene_7595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTATGGGGTACTGATCC	NA	False	NA	NA	False	NA	NA	NA	114184556	114184363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_114184400_114184600
m54284U_201217_021426/13894942/ccs	chr3	-	1925	1	FSM	ENSMUSG00000027663.13	ENSMUST00000195055.2	3813	1	331	1557	-5	-1557	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTTAAACGATACTCCTA	NA	False	NA	NA	False	NA	NA	NA	32419832	32417907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_32417900_32419800
m54284U_201217_021426/139004315/ccs	chr2	-	167	1	Intergenic	novelGene_1242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGAGGATGCCAGCGAC	NA	False	NA	NA	False	NA	NA	NA	166839183	166839016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166839000_166839200
m54284U_201217_021426/139004324/ccs	chr18	-	208	1	Intergenic	novelGene_8962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCAATTCCCCCAACTT	NA	False	NA	NA	False	NA	NA	NA	56584849	56584641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_56584600_56584800
m54284U_201217_021426/139134361/ccs	chr5	-	176	1	Intergenic	novelGene_2971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAAAAGGATTTGT	9456	False	NA	NA	False	NA	NA	NA	134999393	134999217	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_134999200_134999400
m54284U_201217_021426/139201068/ccs	chr19	+	190	1	Intergenic	novelGene_9270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAAAAGAACAAAGAAAG	6197	False	NA	NA	False	NA	NA	NA	42274887	42275077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_42274900_42275100
m54284U_201217_021426/139330979/ccs	chr6	-	189	1	Intergenic	novelGene_3328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATATATAATAACCAA	7158	False	NA	NA	False	NA	NA	NA	72782093	72781904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_72781900_72782100
m54284U_201217_021426/139395474/ccs	chr5	-	2519	1	Intergenic	novelGene_2793	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAAGGACTGGTGGTCGC	NA	False	NA	NA	False	NA	NA	NA	115020416	115017897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115017900_115020400
m54284U_201217_021426/139395530/ccs	chr6	+	3074	1	FSM	ENSMUSG00000003452.16	ENSMUST00000203502.2	10443	1	204	7165	21	-7165	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGAAAGAAAAAAGAA	256	False	NA	NA	False	NA	NA	NA	149310587	149313661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_149310600_149313700
m54284U_201217_021426/139397355/ccs	chr10	-	177	1	Intergenic	novelGene_5313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59783062	59782885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_59782900_59783100
m54284U_201217_021426/139460985/ccs	chr8	-	167	1	Intergenic	novelGene_4619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAATTA	NA	False	NA	NA	False	NA	NA	NA	129582385	129582218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_129582200_129582400
m54284U_201217_021426/139462866/ccs	chr3	-	175	1	Intergenic	novelGene_1710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAAACAAGTT	NA	False	NA	NA	False	NA	NA	NA	142729248	142729073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_142729100_142729200
m54284U_201217_021426/139528944/ccs	chr10	-	173	1	Intergenic	novelGene_5535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGCAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	111092961	111092788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_111092800_111093000
m54284U_201217_021426/13959371/ccs	chr11	+	199	1	Intergenic	novelGene_5674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTCAGGCATGGTGAC	NA	False	NA	NA	False	TTTAAA	-1	NA	4844737	4844936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4844700_4844900
m54284U_201217_021426/13959889/ccs	chr5	-	195	1	Intergenic	novelGene_2459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTATTCAAAGAATCAAC	NA	False	NA	NA	False	NA	NA	NA	8805323	8805128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_8805100_8805300
m54284U_201217_021426/13960737/ccs	chr6	+	164	1	Intergenic	novelGene_3595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATAAATAAT	NA	False	NA	NA	False	NA	NA	NA	149012573	149012737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_149012600_149012700
m54284U_201217_021426/13961475/ccs	chr10	-	3528	1	NIC	ENSMUSG00000020027.19	novel	2153	3	NA	NA	-190	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGAGTTGTAGGTGTA	NA	False	NA	2	True	AATAAA	-32	NA	95250879	95247351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_95247400_95250900
m54284U_201217_021426/139658048/ccs	chrX	-	179	1	Intergenic	novelGene_9654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAGAAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	143076698	143076519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_143076500_143076700
m54284U_201217_021426/139658933/ccs	chr4	-	3047	1	NIC	ENSMUSG00000054428.13	novel	539	3	NA	NA	-6	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATGCCTTCTACTGTCT	9299	False	NA	-20	True	AATAAA	-19	NA	132260912	132257865	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_132257900_132260900
m54284U_201217_021426/139660081/ccs	chr11	-	280	1	Intergenic	novelGene_6456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTAGCTGGTCC	NA	False	NA	NA	False	NA	NA	NA	115446122	115445842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115445800_115446100
m54284U_201217_021426/139788664/ccs	chr15	+	169	1	Intergenic	novelGene_7791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGAAGCAAATAT	NA	False	NA	NA	False	NA	NA	NA	77225177	77225346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_77225200_77225300
m54284U_201217_021426/139791049/ccs	chr2	-	203	1	Intergenic	novelGene_845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTACTATAAAATCTTGA	NA	False	NA	NA	False	AATAAA	-3	NA	70554969	70554766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_70554800_70555000
m54284U_201217_021426/139856072/ccs	chr1	-	191	1	Intergenic	novelGene_483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTTATTTTGTATAT	3711	False	NA	NA	False	NA	NA	NA	171915647	171915456	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_171915500_171915600
m54284U_201217_021426/139987745/ccs	chr9	-	183	1	Intergenic	novelGene_5096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTCCTTAATTTTAAC	7996	False	NA	NA	False	NA	NA	NA	109737898	109737715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_109737700_109737900
m54284U_201217_021426/140051828/ccs	chr3	+	109	1	FSM	ENSMUSG00000118721.1	ENSMUST00000240229.1	107	1	0	-2	0	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATATTGATGCAAAAATC	NA	False	NA	NA	False	NA	NA	NA	66963290	66963399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_66963300_66963400
m54284U_201217_021426/140116637/ccs	chr7	-	192	1	Intergenic	novelGene_4130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCAGCTAGCCTTAAC	NA	False	NA	NA	False	NA	NA	NA	132460189	132459997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_132460000_132460200
m54284U_201217_021426/140247890/ccs	chr7	-	174	1	Intergenic	novelGene_4171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAATTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	141122503	141122329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_141122300_141122500
m54284U_201217_021426/14024899/ccs	chr5	-	178	1	Intergenic	novelGene_3056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAACAAACAGATAGA	NA	False	NA	NA	False	NA	NA	NA	144656465	144656287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_144656300_144656500
m54284U_201217_021426/14025230/ccs	chr10	+	1725	1	Antisense	novelGene_ENSMUSG00000020048.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAAACCTGGTATAA	NA	False	NA	NA	False	TATAAA	-38	NA	86536402	86538127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_+_86536400_86538100
m54284U_201217_021426/140313007/ccs	chr13	-	187	1	NIC	ENSMUSG00000116741.2	novel	562	2	NA	NA	81	-506	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAAACCCTGGTC	NA	False	NA	NA	False	NA	NA	NA	113287903	113287716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_113287700_113287900
m54284U_201217_021426/140315299/ccs	chr12	-	192	1	Intergenic	novelGene_6882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACTGAGTTTATCAAT	NA	False	NA	NA	False	NA	NA	NA	108065897	108065705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_108065700_108065900
m54284U_201217_021426/140576379/ccs	chr11	-	186	1	Intergenic	novelGene_5953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACATTAAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	69765013	69764827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_69764800_69765000
m54284U_201217_021426/140577444/ccs	chr14	-	186	1	Intergenic	novelGene_7548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGGACTGAAACTTGA	NA	False	NA	NA	False	NA	NA	NA	76379689	76379503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_76379500_76379700
m54284U_201217_021426/140640675/ccs	chr3	-	141	1	Intergenic	novelGene_1702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATGCAGTCGTC	NA	False	NA	NA	False	NA	NA	NA	138030324	138030183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_138030200_138030300
m54284U_201217_021426/140706059/ccs	chr3	-	197	1	Intergenic	novelGene_1434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCCTGAGACCAATATT	NA	False	NA	NA	False	NA	NA	NA	70836157	70835960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_70836000_70836200
m54284U_201217_021426/140706085/ccs	chr13	+	219	1	Intergenic	novelGene_7094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCAGTACTAGAGATTG	NA	False	NA	NA	False	AATAAA	-19	NA	55369705	55369924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55369700_55369900
m54284U_201217_021426/140708353/ccs	chr12	+	416	1	Intergenic	novelGene_6685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGGTTATGTTACT	NA	False	NA	13	True	AATAAA	-16	NA	69422337	69422753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_69422300_69422800
m54284U_201217_021426/140839373/ccs	chr1	-	206	1	Intergenic	novelGene_500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTCAACTCACTTCCTCA	NA	False	NA	NA	False	NA	NA	NA	179019471	179019265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_179019300_179019500
m54284U_201217_021426/140903679/ccs	chr1	+	233	1	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCCCAAAGTCAACCAG	NA	False	NA	NA	False	NA	NA	NA	36245968	36246201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_36246000_36246200
m54284U_201217_021426/140904560/ccs	chr10	-	177	1	Intergenic	novelGene_5365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTGCTAACACCACCC	NA	False	NA	NA	False	NA	NA	NA	63214144	63213967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_63214000_63214100
m54284U_201217_021426/14090911/ccs	chr5	+	175	1	Intergenic	novelGene_2936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGAGTGTAAGCCCA	NA	False	NA	8	True	NA	NA	NA	129080783	129080958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_129080800_129081000
m54284U_201217_021426/14091347/ccs	chr11	-	187	1	Intergenic	novelGene_6132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATTTAGAATCTTATAAA	NA	False	NA	NA	False	NA	NA	NA	84565583	84565396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_84565400_84565600
m54284U_201217_021426/14092168/ccs	chrY	+	6809	1	Intergenic	novelGene_9740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTCTTGGCTACATT	NA	False	NA	NA	False	NA	NA	NA	60513103	60519912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrY_+_60513100_60519900
m54284U_201217_021426/140970210/ccs	chr13	+	172	1	Intergenic	novelGene_7139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTCTCTGTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	62407187	62407359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62407200_62407400
m54284U_201217_021426/140970311/ccs	chr3	-	177	1	Intergenic	novelGene_1556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGATATTTTTTACAACA	NA	False	NA	NA	False	NA	NA	NA	94681202	94681025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_94681000_94681200
m54284U_201217_021426/140970658/ccs	chr7	-	183	1	Intergenic	novelGene_3781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATTCAGACATAGTCAC	NA	False	NA	NA	False	NA	NA	NA	30323627	30323444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_30323400_30323600
m54284U_201217_021426/141034786/ccs	chr6	-	176	1	Intergenic	novelGene_3313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	67900904	67900728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_67900700_67900900
m54284U_201217_021426/141035286/ccs	chr11	-	159	1	Intergenic	novelGene_6365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTAAAAAAATCAGGCA	NA	False	NA	NA	False	NA	NA	NA	103882236	103882077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_103882100_103882200
m54284U_201217_021426/141036184/ccs	chr1	-	6823	41	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	-160	99	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_39	278.178499348889	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTCTTTTCCGAGTTC	7727	False	NA	34	True	AGTAAA	-23	NA	84817192	84701885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772046_84792543_84792691_84816949
m54284U_201217_021426/141099915/ccs	chr6	-	196	1	Intergenic	novelGene_3338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGGCCACTCTGAAGCCA	NA	False	NA	NA	False	NA	NA	NA	82126525	82126329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_82126300_82126500
m54284U_201217_021426/141164770/ccs	chr5	+	176	1	Intergenic	novelGene_2494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGTTTAAAAAAAAGTAGC	NA	False	NA	NA	False	TTTAAA	-2	NA	25728925	25729101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_25728900_25729100
m54284U_201217_021426/141165110/ccs	chr4	+	159	1	Intergenic	novelGene_2271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGGCCAAGGTCACACA	4224	False	NA	NA	False	NA	NA	NA	137301119	137301278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_137301100_137301300
m54284U_201217_021426/141427038/ccs	chr10	-	206	1	Intergenic	novelGene_5293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCTGAGATTCCACCTC	NA	False	NA	NA	False	NA	NA	NA	49085065	49084859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_49084900_49085100
m54284U_201217_021426/141427333/ccs	chr12	-	189	1	Intergenic	novelGene_6869	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAAGTAGGGCTGCCAT	NA	False	NA	NA	False	NA	NA	NA	105046057	105045868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_105045900_105046100
m54284U_201217_021426/141427665/ccs	chr9	+	189	1	Intergenic	novelGene_5152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAACTATTAAAAACAA	3331	False	NA	3	True	AATAAA	-6	NA	120388184	120388373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_120388200_120388400
m54284U_201217_021426/14157634/ccs	chr1	-	186	1	Intergenic	novelGene_433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GCAGTAATACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	160921916	160921730	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_160921700_160921900
m54284U_201217_021426/14157971/ccs	chr2	+	213	1	Intergenic	novelGene_739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATACATAAATCTCA	NA	False	NA	NA	False	NA	NA	NA	33753817	33754030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33753800_33754000
m54284U_201217_021426/14158487/ccs	chr19	+	177	1	Intergenic	novelGene_9230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAACAATAGAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	35926732	35926909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_35926700_35926900
m54284U_201217_021426/14158614/ccs	chr3	+	208	1	Intergenic	novelGene_1666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCTTAGATAGCTAAGAA	NA	False	NA	NA	False	AAAAAG	-11	NA	122327332	122327540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_122327300_122327500
m54284U_201217_021426/141690976/ccs	chr2	-	176	1	Intergenic	novelGene_863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAATAAGACTT	227	False	NA	NA	False	NA	NA	NA	73625510	73625334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_73625300_73625500
m54284U_201217_021426/141691496/ccs	chr2	+	188	1	Intergenic	novelGene_980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTCTGTGGGGGCATTTT	NA	False	NA	NA	False	NA	NA	NA	109591429	109591617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_109591400_109591600
m54284U_201217_021426/141886225/ccs	chr13	+	179	1	Intergenic	novelGene_6977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAGAAGAAGAAT	NA	False	NA	NA	False	NA	NA	NA	17922837	17923016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_17922800_17923000
m54284U_201217_021426/142018672/ccs	chr9	+	177	1	Intergenic	novelGene_4864	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACTTTTATATGTA	7800	False	NA	0	True	NA	NA	NA	64187119	64187296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64187100_64187300
m54284U_201217_021426/142147647/ccs	chr13	-	182	1	Intergenic	novelGene_7287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGAAAAAAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	104743402	104743220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_104743200_104743400
m54284U_201217_021426/142147853/ccs	chr10	+	177	1	Intergenic	novelGene_5316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	2233	False	NA	NA	False	NA	NA	NA	59919069	59919246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_59919100_59919200
m54284U_201217_021426/142149501/ccs	chr6	-	179	1	Intergenic	novelGene_3279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCTGAGCAGACAGGGAC	NA	False	NA	NA	False	NA	NA	NA	52687926	52687747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_52687700_52687900
m54284U_201217_021426/142149794/ccs	chr19	-	174	1	Intergenic	novelGene_9141	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAATCTAATGCC	4685	False	NA	NA	False	NA	NA	NA	7228307	7228133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7228100_7228300
m54284U_201217_021426/142150051/ccs	chr16	-	176	1	Intergenic	novelGene_8337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAAGTTGTGATCT	NA	False	NA	NA	False	NA	NA	NA	97741066	97740890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_97740900_97741100
m54284U_201217_021426/142213223/ccs	chr5	+	195	1	Intergenic	novelGene_2509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTCCACAGCAGCCATC	3571	False	NA	NA	False	NA	NA	NA	30147808	30148003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_30147800_30148000
m54284U_201217_021426/142214128/ccs	chr10	-	204	1	ISM	ENSMUSG00000020063.17	ENSMUST00000148516.2	842	3	204	3072	204	-3072	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTGTTTTAGGTTCCTT	NA	False	NA	NA	False	NA	NA	NA	63161201	63160997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_-_63161000_63161200
m54284U_201217_021426/142214465/ccs	chr5	+	189	1	Intergenic	novelGene_3018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCCAGAGGTGGTGTATA	NA	False	NA	NA	False	NA	NA	NA	140319122	140319311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_140319100_140319300
m54284U_201217_021426/14221746/ccs	chr19	-	186	1	Intergenic	novelGene_9337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACAAACGAATGCCCAGT	NA	False	NA	NA	False	NA	NA	NA	53402118	53401932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_53401900_53402100
m54284U_201217_021426/14222991/ccs	chr5	-	188	1	Intergenic	novelGene_2458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATGTATCTAGAATATA	7737	False	NA	NA	False	NA	NA	NA	8615290	8615102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_8615100_8615300
m54284U_201217_021426/14223889/ccs	chr13	-	195	1	Intergenic	novelGene_7206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGCAACTTAAGAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	74208754	74208559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_74208600_74208800
m54284U_201217_021426/142345731/ccs	chr5	+	2708	7	ISM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	5716	271	-286	-271	3prime_fragment	FALSE	canonical	3	315	junction_6	34.0232763462506	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTATTTGTATGTGTG	NA	False	NA	NA	False	TTTAAA	-16	NA	65554598	65567765	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr5_+_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
m54284U_201217_021426/142345857/ccs	chr1	+	231	1	Intergenic	novelGene_182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTATGTATACAGTGCTC	NA	False	NA	NA	False	NA	NA	NA	74225503	74225734	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74225500_74225700
m54284U_201217_021426/142346114/ccs	chr2	-	186	1	Intergenic	novelGene_776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGATCATTTCT	NA	False	NA	NA	False	NA	NA	NA	38818384	38818198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_38818200_38818400
m54284U_201217_021426/142346269/ccs	chr4	-	189	1	Intergenic	novelGene_1823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAAGCCAAGGGTTTG	NA	False	NA	NA	False	NA	NA	NA	43053915	43053726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_43053700_43053900
m54284U_201217_021426/142410156/ccs	chr3	-	192	1	Intergenic	novelGene_1486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATCAGGCTGTAGCTGG	NA	False	NA	-14	True	NA	NA	NA	88482801	88482609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88482600_88482800
m54284U_201217_021426/142411875/ccs	chr12	-	188	1	Intergenic	novelGene_6677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATGAGTGTGGTGGCT	NA	False	NA	NA	False	NA	NA	NA	69185666	69185478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_69185500_69185700
m54284U_201217_021426/142412558/ccs	chr16	-	593	1	Intergenic	novelGene_8299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCTTGCTGTAACCAT	NA	False	NA	NA	False	NA	NA	NA	75739651	75739058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_75739100_75739700
m54284U_201217_021426/142606591/ccs	chr4	-	163	1	Antisense	novelGene_ENSMUSG00000023286.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTTTTAAAATCAAA	7160	False	NA	NA	False	NA	NA	NA	156043630	156043467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_156043500_156043600
m54284U_201217_021426/142607040/ccs	chr4	-	197	1	Intergenic	novelGene_2420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGGATTGATTGGCTTA	NA	False	NA	NA	False	NA	NA	NA	155204246	155204049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155204000_155204200
m54284U_201217_021426/142737565/ccs	chr4	-	180	1	Intergenic	novelGene_1973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGAAGTCTTTTTCTTCC	NA	False	NA	NA	False	NA	NA	NA	106383231	106383051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_106383100_106383200
m54284U_201217_021426/142805571/ccs	chr4	-	229	1	Intergenic	novelGene_2044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAATCTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	117563724	117563495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_117563500_117563700
m54284U_201217_021426/142868497/ccs	chr8	-	187	1	Intergenic	novelGene_4374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTGGGGAAAGTGCTT	NA	False	NA	NA	False	NA	NA	NA	85580522	85580335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_85580300_85580500
m54284U_201217_021426/142871326/ccs	chr18	-	195	1	Intergenic	novelGene_8999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAAACTCCCCAGTG	7178	False	NA	NA	False	TTTAAA	-3	NA	67432272	67432077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_67432100_67432300
m54284U_201217_021426/14288503/ccs	chr6	+	144	1	Intergenic	novelGene_3178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAAGGCTTGAGAG	NA	False	NA	NA	False	NA	NA	NA	37140219	37140363	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_37140200_37140400
m54284U_201217_021426/142935359/ccs	chr8	-	174	1	Intergenic	novelGene_4514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATCTGTAAAAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	112372152	112371978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_112372000_112372200
m54284U_201217_021426/143065932/ccs	chr4	+	200	1	Intergenic	novelGene_1901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCCCCAAGGGGAATT	NA	False	NA	NA	False	NA	NA	NA	71444293	71444493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_71444300_71444500
m54284U_201217_021426/143132053/ccs	chr5	-	205	1	Intergenic	novelGene_2748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGATCATGATGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	108282373	108282168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108282200_108282400
m54284U_201217_021426/143262558/ccs	chr6	+	191	1	Intergenic	novelGene_3258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGGGCTCAGAGCTGAAC	NA	False	NA	NA	False	NA	NA	NA	48355703	48355894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_48355700_48355900
m54284U_201217_021426/143264367/ccs	chr13	+	4118	1	Intergenic	novelGene_7009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCACAGATAGTCAAAGTA	NA	False	NA	NA	False	NA	NA	NA	31854333	31858451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_31854300_31858500
m54284U_201217_021426/143329194/ccs	chr2	+	186	1	Intergenic	novelGene_1168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGTGGACCACACCAAA	NA	False	NA	NA	False	NA	NA	NA	155853931	155854117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_155853900_155854100
m54284U_201217_021426/143393747/ccs	chr17	+	181	1	Intergenic	novelGene_8696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCAGGGATTGTTTTA	5883	False	NA	NA	False	NA	NA	NA	70906924	70907105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_70906900_70907100
m54284U_201217_021426/143395162/ccs	chr4	-	197	1	Intergenic	novelGene_2175	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGTAACGTGAAGTAAAT	NA	False	NA	NA	False	NA	NA	NA	130410800	130410603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_130410600_130410800
m54284U_201217_021426/143458714/ccs	chr13	+	175	1	Intergenic	novelGene_6960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAAGGTATCTGA	NA	False	NA	NA	False	NA	NA	NA	9159985	9160160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_9160000_9160200
m54284U_201217_021426/143526505/ccs	chrX	-	174	1	Intergenic	novelGene_9729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGATACAGTGCT	NA	False	NA	NA	False	NA	NA	NA	161718139	161717965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161718000_161718100
m54284U_201217_021426/14353712/ccs	chr5	+	207	1	Intergenic	novelGene_2720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCCGCCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	105900239	105900446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_105900200_105900400
m54284U_201217_021426/143590775/ccs	chr2	-	175	1	Intergenic	novelGene_563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATATAGCCATTTA	NA	False	NA	NA	False	NA	NA	NA	3274208	3274033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_3274000_3274200
m54284U_201217_021426/143592077/ccs	chr15	-	173	1	Intergenic	novelGene_7607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTCCCTGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	4465201	4465028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_4465000_4465200
m54284U_201217_021426/143655771/ccs	chr12	-	4333	1	Intergenic	novelGene_6890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACACAGCTGTGGTCCCT	NA	False	NA	NA	False	NA	NA	NA	109524641	109520308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_109520300_109524600
m54284U_201217_021426/143720537/ccs	chr11	-	233	1	Intergenic	novelGene_6236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTTTCTCTCTATG	8694	False	NA	NA	False	NA	NA	NA	95823118	95822885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95822900_95823100
m54284U_201217_021426/143720559/ccs	chr11	-	218	1	Intergenic	novelGene_5852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTTCTTCGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	55369456	55369238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_55369200_55369500
m54284U_201217_021426/143786571/ccs	chr8	-	4343	1	Intergenic	novelGene_4313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAACACAGAATAAAATT	NA	False	NA	NA	False	NA	NA	NA	69675857	69671514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_69671500_69675900
m54284U_201217_021426/143852284/ccs	chr5	-	193	1	Intergenic	novelGene_2951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAATAAGTATTTCAAC	NA	False	NA	NA	False	NA	NA	NA	130090235	130090042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_130090000_130090200
m54284U_201217_021426/143854132/ccs	chr4	-	174	1	Intergenic	novelGene_2335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAAAACTG	NA	False	NA	NA	False	NA	NA	NA	146111542	146111368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146111400_146111500
m54284U_201217_021426/143854294/ccs	chr12	+	178	1	Intergenic	novelGene_6566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAACAACAACACATGAC	NA	False	NA	NA	False	NA	NA	NA	11249918	11250096	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_11249900_11250100
m54284U_201217_021426/144113824/ccs	chr8	-	190	1	Intergenic	novelGene_4255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATAGAGCCAAG	NA	False	NA	NA	False	NA	NA	NA	31607033	31606843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_31606800_31607000
m54284U_201217_021426/144115439/ccs	chr11	+	173	1	Intergenic	novelGene_6241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTTTAAAGAACACTTA	9010	False	NA	NA	False	NA	NA	NA	95867928	95868101	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95867900_95868100
m54284U_201217_021426/144115769/ccs	chr4	-	3439	19	NIC	ENSMUSG00000045205.17	novel	6754	19	NA	NA	0	-3510	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	16.6982108896007	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGCCTCACGCCTTTA	80	False	NA	NA	False	ATTAAA	-17	NA	11322047	11264824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321714
m54284U_201217_021426/144179349/ccs	chr11	+	208	1	Intergenic	novelGene_5881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATTCCCTGTGTAACGT	NA	False	NA	NA	False	NA	NA	NA	59958989	59959197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59959000_59959200
m54284U_201217_021426/144181283/ccs	chr15	-	604	1	NIC	ENSMUSG00000053411.17	novel	714	6	NA	NA	0	-2748	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACTTTAAAGGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	79818100	79817496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79817500_79818100
m54284U_201217_021426/144181392/ccs	chr2	+	159	1	Intergenic	novelGene_600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAATAAATAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	17823750	17823909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_17823800_17823900
m54284U_201217_021426/144181484/ccs	chr5	+	1806	1	Antisense	novelGene_ENSMUSG00000035898.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAAACCAGAACTTTTAG	NA	False	NA	NA	False	NA	NA	NA	86311692	86313498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_+_86311700_86313500
m54284U_201217_021426/14418247/ccs	chr15	+	217	1	Intergenic	novelGene_7952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	AATAAA	-14	NA	98904259	98904476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98904300_98904500
m54284U_201217_021426/1443084/ccs	chr2	+	2646	1	Genic_Genomic	ENSMUSG00000027324.2	novel	NA	NA	NA	NA	3256	922	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAACCATCCATTGCAA	6511	False	NA	NA	False	AATAAA	-23	NA	118868526	118871172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_+_118868500_118871200
m54284U_201217_021426/144311178/ccs	chr4	+	2635	1	Intergenic	novelGene_2340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCTGGAAGTGTTGTGTA	NA	False	NA	NA	False	AATAAA	-25	NA	146300140	146302775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_146300100_146302800
m54284U_201217_021426/1443612/ccs	chr13	+	3785	1	Intergenic	novelGene_7153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAACTTACGGCACCTA	NA	False	NA	NA	False	NA	NA	NA	63436708	63440493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_63436700_63440500
m54284U_201217_021426/1443676/ccs	chr4	-	191	1	Intergenic	novelGene_2034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCTTGTATGTTAAAG	NA	False	NA	NA	False	NA	NA	NA	116718643	116718452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116718500_116718600
m54284U_201217_021426/144378221/ccs	chrX	-	2971	7	NIC	ENSMUSG00000001128.8	novel	1636	9	NA	NA	155	-78	intron_retention	FALSE	canonical	3	6	junction_1	34.4887260162248	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTAAGATTCTGTAA	NA	False	NA	-5	True	AATAAA	-15	NA	20797639	20791770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_20791999_20793419_20793632_20793773_20793963_20794191_20794366_20794566_20794759_20794881_20795053_20795834
m54284U_201217_021426/144509005/ccs	chr8	+	188	1	Intergenic	novelGene_4546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACACTAAGAGCGATGA	7121	False	NA	NA	False	NA	NA	NA	120496181	120496369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_120496200_120496400
m54284U_201217_021426/144509354/ccs	chr17	-	190	1	Intergenic	novelGene_8494	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACCCAAGTGACAGCTCAT	NA	False	NA	NA	False	NA	NA	NA	29780234	29780044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29780000_29780200
m54284U_201217_021426/144572946/ccs	chr6	+	188	1	Intergenic	novelGene_3592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGCTTTGGTTGTGGTG	NA	False	NA	NA	False	NA	NA	NA	148950021	148950209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_148950000_148950200
m54284U_201217_021426/144574914/ccs	chr14	-	150	1	Intergenic	novelGene_7514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTTTTAAGGAAGG	NA	False	NA	NA	False	NA	NA	NA	65035956	65035806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_65035800_65036000
m54284U_201217_021426/144705786/ccs	chr2	-	162	1	Intergenic	novelGene_1202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGAAAGGCTCTAT	NA	False	NA	NA	False	NA	NA	NA	162694621	162694459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_162694500_162694600
m54284U_201217_021426/144770126/ccs	chr11	-	191	1	Intergenic	novelGene_6459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGGTCTAAAATTTAGC	NA	False	NA	NA	False	NA	NA	NA	115571440	115571249	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115571200_115571400
m54284U_201217_021426/144901242/ccs	chr15	-	194	1	Intergenic	novelGene_7996	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGAGAGCCCCCAGTGC	NA	False	NA	NA	False	NA	NA	NA	100861962	100861768	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100861800_100862000
m54284U_201217_021426/144902621/ccs	chr11	+	177	1	Intergenic	novelGene_5750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATGTAAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	24285893	24286070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_24285900_24286100
m54284U_201217_021426/144902837/ccs	chr7	+	187	1	Intergenic	novelGene_4062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGAACTCAAATCACTA	NA	False	NA	NA	False	NA	NA	NA	120709340	120709527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_120709300_120709500
m54284U_201217_021426/144965832/ccs	chr11	-	197	1	Intergenic	novelGene_6254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAGCAGTCGGGTACTC	NA	False	NA	NA	False	NA	NA	NA	96723125	96722928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_96722900_96723100
m54284U_201217_021426/144966424/ccs	chr10	+	266	1	Intergenic	novelGene_5286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTATAAGAGTTTCGGTG	NA	False	NA	NA	False	NA	NA	NA	43399795	43400061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_43399800_43400100
m54284U_201217_021426/144967785/ccs	chr9	-	2187	1	Intergenic	novelGene_4750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAACAAAAAAAAAAAAA	NA	False	NA	NA	False	AAAACA	-18	NA	47613536	47611349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_47611300_47613500
m54284U_201217_021426/145033426/ccs	chr2	+	219	1	Intergenic	novelGene_1199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTCCTAGGTTAAGAAG	NA	False	NA	NA	False	NA	NA	NA	160306659	160306878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_160306700_160306900
m54284U_201217_021426/145293397/ccs	chr4	+	259	1	Intergenic	novelGene_2182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGAAAAAGTTTCCCTTAT	NA	False	NA	NA	False	NA	NA	NA	131866427	131866686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_131866400_131866700
m54284U_201217_021426/145424790/ccs	chr1	-	9531	42	NNC	ENSMUSG00000026219.15	novel	9632	41	NA	NA	62	0	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_41	289.006814326147	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTTACTTTATGTACA	8529	False	NA	-8	True	AATAAA	-22	NA	84816390	84698909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738480_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84771306_84771392_84772049_84792543_84792691_84816331
m54284U_201217_021426/145491642/ccs	chr11	+	187	1	Intergenic	novelGene_5677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAAGAAATACAAAGTAT	NA	False	NA	NA	False	NA	NA	NA	5072468	5072655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_5072500_5072700
m54284U_201217_021426/145491828/ccs	chr5	+	176	1	Intergenic	novelGene_2690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATCTAATAAAAT	4915	False	NA	NA	False	NA	NA	NA	100082821	100082997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_100082800_100083000
m54284U_201217_021426/145492799/ccs	chr9	+	192	1	Intergenic	novelGene_4992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATATATATGTATATA	NA	False	NA	NA	False	NA	NA	NA	88937278	88937470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_88937300_88937500
m54284U_201217_021426/14551076/ccs	chr9	-	185	1	Intergenic	novelGene_5064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAAGAAAGAAAGAAA	6793	False	NA	NA	False	NA	NA	NA	106129606	106129421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_106129400_106129600
m54284U_201217_021426/145557143/ccs	chr4	-	195	1	Intergenic	novelGene_1978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAACAGCCATTTGCAC	NA	False	NA	NA	False	NA	NA	NA	106782767	106782572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_106782600_106782800
m54284U_201217_021426/145623662/ccs	chr7	+	210	1	Intergenic	novelGene_4007	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCTACAAAAGACTTTTAAG	NA	False	NA	NA	False	NA	NA	NA	109249941	109250151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109249900_109250200
m54284U_201217_021426/145688807/ccs	chr6	-	174	1	Intergenic	novelGene_3197	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	38325722	38325548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38325500_38325700
m54284U_201217_021426/145753344/ccs	chr6	-	194	1	Intergenic	novelGene_3519	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATTCAATTAAAGCCACT	NA	False	NA	NA	False	NA	NA	NA	125519444	125519250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_125519200_125519400
m54284U_201217_021426/145753909/ccs	chr14	-	181	1	Intergenic	novelGene_7485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTGGACATACACCCTA	NA	False	NA	NA	False	NA	NA	NA	57528241	57528060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_57528100_57528200
m54284U_201217_021426/145949168/ccs	chr1	-	160	1	Intergenic	novelGene_384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAAGAGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	153372529	153372369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153372400_153372500
m54284U_201217_021426/145951196/ccs	chr4	-	187	1	Intergenic	novelGene_2021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGGCGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	116495907	116495720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116495700_116495900
m54284U_201217_021426/146014958/ccs	chr17	-	185	1	Intergenic	novelGene_8547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAGAAAGAGTGAGAAAGAT	5279	False	NA	NA	False	NA	NA	NA	35214324	35214139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35214100_35214300
m54284U_201217_021426/146016679/ccs	chr3	-	203	1	Intergenic	novelGene_1562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	158	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAATATGGTCTCAGTG	5177	False	NA	NA	False	NA	NA	NA	94998235	94998032	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_94998000_94998200
m54284U_201217_021426/146080782/ccs	chr13	-	2062	1	Intergenic	novelGene_7241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTGAGGAAGCCTTAG	NA	False	NA	NA	False	NA	NA	NA	94301390	94299328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_94299300_94301400
m54284U_201217_021426/146082398/ccs	chr13	+	171	1	Intergenic	novelGene_7148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	62723343	62723514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_62723300_62723500
m54284U_201217_021426/14615317/ccs	chr11	-	152	1	Intergenic	novelGene_6283	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGTAAAAAGATAAAGGCC	9903	False	NA	NA	False	ATTAAA	-2	NA	97689801	97689649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97689600_97689800
m54284U_201217_021426/146211302/ccs	chr7	+	2776	1	Genic_Genomic	ENSMUSG00000109511.2	novel	NA	NA	NA	NA	10620	1020	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTGTTCAGGATTG	13	True	NA	13	True	AATAAA	-15	NA	44478480	44481256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_44478500_44481300
m54284U_201217_021426/146211570/ccs	chr3	+	262	1	Intergenic	novelGene_1361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCCAGTGACCACTCCT	NA	False	NA	NA	False	NA	NA	NA	21903814	21904076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_21903800_21904100
m54284U_201217_021426/146278274/ccs	chr15	+	258	1	Intergenic	novelGene_7977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGTAGAGGCAGGCAGA	NA	False	NA	NA	False	TTTAAA	-43	NA	99942213	99942471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99942200_99942500
m54284U_201217_021426/146278862/ccs	chr4	+	213	1	Intergenic	novelGene_2222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGATGGCTCAGTA	NA	False	NA	NA	False	NA	NA	NA	133529429	133529642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133529400_133529600
m54284U_201217_021426/146342445/ccs	chrX	+	243	1	Intergenic	novelGene_9583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGCCCTCTGGCCTTT	NA	False	NA	NA	False	NA	NA	NA	102301001	102301244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_102301000_102301200
m54284U_201217_021426/146343326/ccs	chr7	-	4209	23	NIC	ENSMUSG00000032637.16	novel	3853	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	137	junction_13	263.178850666266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	9414	False	NA	-7	True	NA	NA	NA	126102609	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091620_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
m54284U_201217_021426/146410050/ccs	chr19	-	174	1	Intergenic	novelGene_9281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAAAATCCATTCAA	NA	False	NA	NA	False	NA	NA	NA	44357673	44357499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_44357500_44357700
m54284U_201217_021426/146474472/ccs	chr10	-	195	1	Intergenic	novelGene_5564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAACTAAGTAGACCA	NA	False	NA	NA	False	NA	NA	NA	119084745	119084550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_119084600_119084700
m54284U_201217_021426/146541088/ccs	chr8	-	144	1	Intergenic	novelGene_4246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATGGGGGGCTTTTCT	NA	False	NA	NA	False	NA	NA	NA	26676857	26676713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_26676700_26676900
m54284U_201217_021426/146605771/ccs	chr10	-	185	1	Intergenic	novelGene_5305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACATTACAGGTACAAAG	NA	False	NA	NA	False	NA	NA	NA	58210559	58210374	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_58210400_58210600
m54284U_201217_021426/146606116/ccs	chr18	-	185	1	Intergenic	novelGene_8795	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTAAGGCTAGCAATA	NA	False	NA	NA	False	NA	NA	NA	3104785	3104600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_3104600_3104800
m54284U_201217_021426/146670245/ccs	chr2	+	290	1	FSM	ENSMUSG00000066068.6	ENSMUST00000118269.2	318	1	92	-64	92	64	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGAATACTGTCTAAG	NA	False	NA	NA	False	NA	NA	NA	32161948	32162238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_32161900_32162200
m54284U_201217_021426/146736146/ccs	chr9	+	205	1	Intergenic	novelGene_5159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGATTACAATTGATT	NA	False	NA	NA	False	NA	NA	NA	122382291	122382496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_122382300_122382500
m54284U_201217_021426/146736743/ccs	chr10	-	4670	1	NIC	ENSMUSG00000000902.14	novel	1660	9	NA	NA	1360	-5296	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTCTCATACTTGCATTG	8249	False	NA	NA	False	AAGAAA	-17	NA	75756063	75751393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_75751400_75756100
m54284U_201217_021426/146736993/ccs	chr2	+	6399	1	Intergenic	novelGene_959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAGGAAAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	102162388	102168787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_102162400_102168800
m54284U_201217_021426/14680386/ccs	chr4	+	175	1	Intergenic	novelGene_1945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAGCAAATAGAT	NA	False	NA	NA	False	NA	NA	NA	99491987	99492162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_99492000_99492200
m54284U_201217_021426/14681222/ccs	chr16	+	396	1	Intergenic	novelGene_8023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTATGGTGAAAAAAAAAAAA	7947	False	NA	9	True	AGTAAA	-9	NA	3550158	3550554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_3550200_3550600
m54284U_201217_021426/146933440/ccs	chr2	-	175	1	Intergenic	novelGene_1080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAGAAGAA	9885	False	NA	NA	False	NA	NA	NA	132108636	132108461	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_132108500_132108600
m54284U_201217_021426/146997658/ccs	chr18	-	157	1	Intergenic	novelGene_8875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGCCGGGCGTGGTGGC	NA	False	NA	NA	False	NA	NA	NA	34862970	34862813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34862800_34863000
m54284U_201217_021426/146998255/ccs	chr3	-	189	1	Intergenic	novelGene_1602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTTGGAGTGCTTGTCCT	NA	False	NA	NA	False	NA	NA	NA	102994140	102993951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_102994000_102994100
m54284U_201217_021426/147063674/ccs	chr2	-	168	1	Intergenic	novelGene_651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCATTGTTGTTGTTT	7641	False	NA	NA	False	NA	NA	NA	26925794	26925626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_26925600_26925800
m54284U_201217_021426/147128989/ccs	chr11	-	194	1	Intergenic	novelGene_6377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTATTCACTGGTTGCTCT	8899	False	NA	NA	False	NA	NA	NA	105117421	105117227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_105117200_105117400
m54284U_201217_021426/147131045/ccs	chr4	-	202	1	Intergenic	novelGene_2080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTCCTAGAAAAGTTAG	8756	False	NA	NA	False	NA	NA	NA	122918704	122918502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_122918500_122918700
m54284U_201217_021426/147194374/ccs	chrX	-	246	1	Intergenic	novelGene_9560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATCCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	100538173	100537927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_100537900_100538200
m54284U_201217_021426/147326181/ccs	chr10	-	191	1	Intergenic	novelGene_5389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCCCAGAGGAAGGCT	NA	False	NA	NA	False	NA	NA	NA	69959897	69959706	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_69959700_69959900
m54284U_201217_021426/147391852/ccs	chr8	+	2620	2	NNC	ENSMUSG00000000740.13	novel	780	6	NA	NA	64	0	intron_retention	FALSE	canonical	3	503	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTTTCTTTGTCTTTT	NA	False	NA	17	True	AATAAA	-18	NA	123829152	123831983	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_123829185_123829395
m54284U_201217_021426/147456472/ccs	chr5	-	189	1	Intergenic	novelGene_2508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTATATGCTTAGCCCA	NA	False	NA	NA	False	NA	NA	NA	29933703	29933514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_29933500_29933700
m54284U_201217_021426/147458840/ccs	chr3	+	185	1	Intergenic	novelGene_1718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTAGACTTGCCATAC	NA	False	NA	NA	False	NA	NA	NA	151471263	151471448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_151471300_151471400
m54284U_201217_021426/14747473/ccs	chr4	-	262	1	Intergenic	novelGene_2110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACCATTGTCTTAGGTC	NA	False	NA	NA	False	NA	NA	NA	125940312	125940050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_125940000_125940300
m54284U_201217_021426/147521670/ccs	chr4	+	178	1	Intergenic	novelGene_2115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAGTTCAATGTTAT	NA	False	NA	NA	False	NA	NA	NA	126351919	126352097	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126351900_126352100
m54284U_201217_021426/147524437/ccs	chr16	-	192	1	Intergenic	novelGene_8067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGGTCCTGAGTGAG	NA	False	NA	NA	False	NA	NA	NA	13440734	13440542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_13440500_13440700
m54284U_201217_021426/147588181/ccs	chr10	+	184	1	Intergenic	novelGene_5387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAATTTTCCCGAGG	9655	False	NA	NA	False	NA	NA	NA	69797180	69797364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_69797200_69797400
m54284U_201217_021426/147588924/ccs	chr2	-	176	1	Intergenic	novelGene_1096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAGATAAAAAAG	5315	False	NA	NA	False	NA	NA	NA	142832907	142832731	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_142832700_142832900
m54284U_201217_021426/147589502/ccs	chr5	-	208	1	Intergenic	novelGene_2670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCTTGGAGGCAAGGAA	NA	False	NA	NA	False	NA	NA	NA	92282961	92282753	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92282800_92283000
m54284U_201217_021426/147589873/ccs	chrX	-	176	1	Intergenic	novelGene_9683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAGGGAGAGGAG	NA	False	NA	NA	False	NA	NA	NA	152002020	152001844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_152001800_152002000
m54284U_201217_021426/147721038/ccs	chr17	-	170	1	Intergenic	novelGene_8703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAACAAAATTGGTTTCTG	9891	False	NA	NA	False	NA	NA	NA	71117739	71117569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71117600_71117700
m54284U_201217_021426/147783725/ccs	chr4	-	185	1	Intergenic	novelGene_1988	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAAAAGAATGTGT	NA	False	NA	NA	False	NA	NA	NA	108085143	108084958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_108085000_108085100
m54284U_201217_021426/147785206/ccs	chr7	+	185	1	Intergenic	novelGene_3873	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGCTTTGGGCAAGGT	NA	False	NA	NA	False	NA	NA	NA	63439098	63439283	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_63439100_63439300
m54284U_201217_021426/147915864/ccs	chr10	-	181	1	Intergenic	novelGene_5209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGGGCAAGTGATACA	NA	False	NA	NA	False	NA	NA	NA	18396031	18395850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_18395800_18396000
m54284U_201217_021426/148045851/ccs	chr8	-	195	1	Intergenic	novelGene_4463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	662	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAATAATTGTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	107551450	107551255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107551300_107551400
m54284U_201217_021426/148047903/ccs	chr11	-	159	1	Intergenic	novelGene_5730	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	22887677	22887518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_22887500_22887700
m54284U_201217_021426/148113671/ccs	chr3	+	287	1	Intergenic	novelGene_1526	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGAGTAATATAT	NA	False	NA	14	True	AATAAA	-10	NA	89753559	89753846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89753600_89753800
m54284U_201217_021426/148114099/ccs	chr6	-	170	1	Intergenic	novelGene_3504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAAACAAGAAGGGGAC	2556	False	NA	NA	False	NA	NA	NA	124917550	124917380	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_124917400_124917600
m54284U_201217_021426/14811620/ccs	chr7	+	233	1	Intergenic	novelGene_4086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATAAGTTTGGGTATGTT	NA	False	NA	NA	False	NA	NA	NA	126076411	126076644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_126076400_126076600
m54284U_201217_021426/148244149/ccs	chr3	-	194	1	Intergenic	novelGene_1692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGTTAGTAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	135223566	135223372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_135223400_135223600
m54284U_201217_021426/148244637/ccs	chr11	-	218	1	Intergenic	novelGene_6288	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAG	9830	False	NA	NA	False	NA	NA	NA	97772038	97771820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97771800_97772000
m54284U_201217_021426/148308119/ccs	chr2	-	188	1	Intergenic	novelGene_1304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGCACACCTATCAACAG	NA	False	NA	NA	False	NA	NA	NA	176974190	176974002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_176974000_176974200
m54284U_201217_021426/148375022/ccs	chr5	+	178	1	Intergenic	novelGene_2723	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGAGGAACCC	NA	False	NA	NA	False	NA	NA	NA	106657444	106657622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_106657400_106657600
m54284U_201217_021426/148441006/ccs	chr4	-	184	1	Intergenic	novelGene_2099	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACACACACACACACACA	NA	False	NA	NA	False	NA	NA	NA	124596895	124596711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_124596700_124596900
m54284U_201217_021426/148505731/ccs	chr18	+	186	1	Intergenic	novelGene_9043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCATGGCTTCCTTTGCT	NA	False	NA	NA	False	NA	NA	NA	77917032	77917218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_77917000_77917200
m54284U_201217_021426/148507486/ccs	chr13	+	670	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	182	-57	182	57	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGTAGCATCTTGAT	NA	False	NA	NA	False	AATAAA	-29	NA	108807318	108807988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_108807300_108808000
m54284U_201217_021426/148572812/ccs	chr7	+	156	1	Intergenic	novelGene_4003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAATAAATAAAATTTTT	4112	False	NA	NA	False	NA	NA	NA	107171101	107171257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_107171100_107171300
m54284U_201217_021426/148637262/ccs	chr7	+	251	1	Intergenic	novelGene_3655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATGTATGTGAGTACA	NA	False	NA	NA	False	NA	NA	NA	12720295	12720546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_12720300_12720500
m54284U_201217_021426/148637502/ccs	chr5	-	154	1	Intergenic	novelGene_2541	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTGGGTCTTCCC	NA	False	NA	NA	False	NA	NA	NA	33790600	33790446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_33790400_33790600
m54284U_201217_021426/148701334/ccs	chr14	-	190	1	Intergenic	novelGene_7569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAATTACATGACTG	NA	False	NA	NA	False	NA	NA	NA	89628025	89627835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_89627800_89628000
m54284U_201217_021426/148769126/ccs	chr1	-	181	1	Intergenic	novelGene_397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	155382196	155382015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_155382000_155382200
m54284U_201217_021426/14877198/ccs	chr11	-	3225	1	ISM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	14668	0	14668	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGTATTGTCCCAATAAA	NA	False	NA	NA	False	AATGAA	-1	NA	115173672	115170447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_115170400_115173700
m54284U_201217_021426/148834256/ccs	chr9	-	165	1	Intergenic	novelGene_4731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAACAAACTATT	2985	False	NA	NA	False	NA	NA	NA	44276360	44276195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_44276200_44276400
m54284U_201217_021426/148835139/ccs	chr11	-	183	1	Intergenic	novelGene_6060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGGGGGTCTAGGTCC	NA	False	NA	NA	False	NA	NA	NA	77977884	77977701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_77977700_77977900
m54284U_201217_021426/148898968/ccs	chr4	-	187	1	Intergenic	novelGene_2391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTCATAAAATTGTG	NA	False	NA	NA	False	NA	NA	NA	149823834	149823647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_149823600_149823800
m54284U_201217_021426/148963626/ccs	chr6	+	287	1	Intergenic	novelGene_3495	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATGTTGGTGATTTGA	NA	False	NA	NA	False	NA	NA	NA	124762438	124762725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_124762400_124762700
m54284U_201217_021426/149031727/ccs	chr17	-	189	1	Intergenic	novelGene_8702	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAAAGCAGAATGAAG	NA	False	NA	NA	False	NA	NA	NA	71104448	71104259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71104300_71104400
m54284U_201217_021426/149094994/ccs	chr5	-	191	1	Intergenic	novelGene_2849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAAATTCCAATTAAAGC	NA	False	NA	NA	False	NA	NA	NA	121362259	121362068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121362100_121362300
m54284U_201217_021426/149225599/ccs	chr6	+	1162	6	NNC	ENSMUSG00000023505.14	novel	1976	6	NA	NA	0	-251	intron_retention	FALSE	canonical	0	0	junction_3	418.822635491445	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTAAGAAGTTAGAGCA	1344	False	NA	32	True	ATTAAA	-19	NA	124807179	124810244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_+_124807237_124807326_124807614_124808328_124808452_124809108_124809403_124809528_124809633_124809947
m54284U_201217_021426/149227141/ccs	chr10	-	177	1	Intergenic	novelGene_5509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAATAGTAAAAAC	NA	False	NA	NA	False	NA	NA	NA	94813031	94812854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_94812900_94813000
m54284U_201217_021426/149292927/ccs	chr18	-	208	1	Intergenic	novelGene_8868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGACAAGTCTATGAAGG	NA	False	NA	NA	False	NA	NA	NA	34417329	34417121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_34417100_34417300
m54284U_201217_021426/149422745/ccs	chrX	+	182	1	Intergenic	novelGene_9620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTACAGGA	NA	False	NA	NA	False	NA	NA	NA	117370131	117370313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_117370100_117370300
m54284U_201217_021426/149423628/ccs	chr17	-	182	1	Intergenic	novelGene_8402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTATTTTTATTA	8367	False	NA	NA	False	NA	NA	NA	24065117	24064935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24064900_24065100
m54284U_201217_021426/149424736/ccs	chr11	+	210	1	Intergenic	novelGene_6384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAATAAATATTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	106031916	106032126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106031900_106032100
m54284U_201217_021426/14944391/ccs	chr18	-	200	1	Intergenic	novelGene_9017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTCATTTTAGCCACT	NA	False	NA	NA	False	NA	NA	NA	74947059	74946859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_74946900_74947100
m54284U_201217_021426/149488296/ccs	chr4	-	3679	1	Genic_Genomic	ENSMUSG00000053841.16	novel	NA	NA	NA	NA	12706	1822	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGGTACTGATTGTCT	NA	False	NA	-9	True	CATAAA	-13	NA	129521727	129518048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_-_129518000_129521700
m54284U_201217_021426/149489613/ccs	chr13	+	188	1	Intergenic	novelGene_7256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	2019	False	NA	NA	False	NA	NA	NA	97140009	97140197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_97140000_97140200
m54284U_201217_021426/149618770/ccs	chr6	-	201	1	Intergenic	novelGene_3227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCCGTATCCAGCATGT	NA	False	NA	NA	False	NA	NA	NA	39514859	39514658	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39514700_39514900
m54284U_201217_021426/149619692/ccs	chr1	+	214	1	Intergenic	novelGene_392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCTTCTAGATAGTTT	866	False	NA	NA	False	NA	NA	NA	153741403	153741617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_153741400_153741600
m54284U_201217_021426/149686199/ccs	chr4	+	181	1	Intergenic	novelGene_1887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAAGTCCTTGGGTTTTT	NA	False	NA	NA	False	NA	NA	NA	59536732	59536913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_59536700_59536900
m54284U_201217_021426/149752238/ccs	chr2	-	1779	1	Intergenic	novelGene_945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	92031591	92029812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_92029800_92031600
m54284U_201217_021426/149815491/ccs	chr9	-	158	1	Intergenic	novelGene_4680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATAAAAATCTAA	NA	False	NA	NA	False	NA	NA	NA	25574982	25574824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_25574800_25575000
m54284U_201217_021426/149817855/ccs	chr6	-	203	1	Intergenic	novelGene_3445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATACAAGCATGCTTGTTG	NA	False	NA	NA	False	NA	NA	NA	119579444	119579241	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_119579200_119579400
m54284U_201217_021426/149882239/ccs	chr12	+	530	1	Intergenic	novelGene_6863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTTTTTTATTACTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	104718510	104719040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_104718500_104719000
m54284U_201217_021426/150012865/ccs	chr19	+	132	1	Intergenic	novelGene_9255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAACAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	41430321	41430453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_41430300_41430500
m54284U_201217_021426/150077974/ccs	chr12	-	231	1	Intergenic	novelGene_6744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGATGTCATAATGAATA	9004	False	NA	NA	False	NA	NA	NA	78852634	78852403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_78852400_78852600
m54284U_201217_021426/15008119/ccs	chr11	-	192	1	Intergenic	novelGene_5682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGGTGAGTTGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	5670310	5670118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_5670100_5670300
m54284U_201217_021426/15008378/ccs	chr2	+	175	1	Intergenic	novelGene_1055	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAATTAAT	NA	False	NA	NA	False	NA	NA	NA	126990941	126991116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_126990900_126991100
m54284U_201217_021426/15009141/ccs	chr7	+	199	1	Intergenic	novelGene_4100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGAGGATCCCACGTA	3672	False	NA	NA	False	NA	NA	NA	127087504	127087703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_127087500_127087700
m54284U_201217_021426/150145614/ccs	chr16	-	210	1	Intergenic	novelGene_8092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTCTTGAGCCAGGT	NA	False	NA	NA	False	NA	NA	NA	16419203	16418993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_16419000_16419200
m54284U_201217_021426/150276588/ccs	chr19	+	175	1	Intergenic	novelGene_9150	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAAAGTTTAATT	6565	False	NA	NA	False	NA	NA	NA	8763995	8764170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_8764000_8764200
m54284U_201217_021426/150341979/ccs	chr7	-	188	1	Intergenic	novelGene_3725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	2097	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGCCTCGGGCCGGGTG	6181	False	NA	NA	False	NA	NA	NA	27183298	27183110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_27183100_27183300
m54284U_201217_021426/150406316/ccs	chr6	+	179	1	Intergenic	novelGene_3287	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATACTTGGAGGCAGGAG	NA	False	NA	NA	False	NA	NA	NA	54809799	54809978	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_54809800_54810000
m54284U_201217_021426/150472657/ccs	chr4	-	188	1	Intergenic	novelGene_2253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCAGTGGTGGCGCAT	NA	False	NA	NA	False	NA	NA	NA	135953101	135952913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135952900_135953100
m54284U_201217_021426/150734336/ccs	chr14	+	174	1	Intergenic	novelGene_7357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAAGTCACTATGT	NA	False	NA	NA	False	NA	NA	NA	24531026	24531200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_24531000_24531200
m54284U_201217_021426/15073588/ccs	chr9	-	212	1	Intergenic	novelGene_4845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGATGTCCTCTAGGCTG	NA	False	NA	NA	False	NA	NA	NA	62633734	62633522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_62633500_62633700
m54284U_201217_021426/15075280/ccs	chr4	+	166	1	Intergenic	novelGene_1958	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATATATTTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	101229574	101229740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_101229600_101229700
m54284U_201217_021426/15075693/ccs	chr2	+	171	1	Intergenic	novelGene_652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATTAAAAAAAAGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	27327234	27327405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_27327200_27327400
m54284U_201217_021426/150799142/ccs	chr14	-	177	1	Intergenic	novelGene_7598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCT	NA	False	NA	NA	False	NA	NA	NA	121054752	121054575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_121054600_121054800
m54284U_201217_021426/150799879/ccs	chr4	-	174	1	Intergenic	novelGene_2393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCTTTAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	150096175	150096001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_150096000_150096200
m54284U_201217_021426/150864659/ccs	chr10	+	182	1	Intergenic	novelGene_5598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGTAAATAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	126789703	126789885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_126789700_126789900
m54284U_201217_021426/150866477/ccs	chr7	+	2550	1	NIC	ENSMUSG00000057215.7	novel	1294	6	NA	NA	54499	-326	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCGACCAAGTGCTGGGA	NA	False	NA	NA	False	NA	NA	NA	106896727	106899277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_106896700_106899300
m54284U_201217_021426/1508915/ccs	chr13	-	5347	1	NIC	ENSMUSG00000006715.12	novel	963	7	NA	NA	0	-2871	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATAAGTCTTGCCTTG	NA	False	NA	NA	False	AGTAAA	-25	NA	24945906	24940559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_24940600_24945900
m54284U_201217_021426/150929825/ccs	chr7	-	181	1	Intergenic	novelGene_3860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49211018	49210837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_49210800_49211000
m54284U_201217_021426/150995281/ccs	chr13	-	189	1	Intergenic	novelGene_7224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAATTAAGCACTATCAAA	NA	False	NA	NA	False	NA	NA	NA	82088423	82088234	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_82088200_82088400
m54284U_201217_021426/151192826/ccs	chr19	+	163	1	Intergenic	novelGene_9205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATTGCAAAGCACAT	NA	False	NA	NA	False	NA	NA	NA	29651269	29651432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_29651300_29651400
m54284U_201217_021426/151258143/ccs	chr10	-	219	1	Antisense	novelGene_ENSMUSG00000112824.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	254	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTAAGGGGGGGCCCT	NA	False	NA	NA	False	NA	NA	NA	53940908	53940689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_-_53940700_53940900
m54284U_201217_021426/151259871/ccs	chr17	-	168	1	Intergenic	novelGene_8363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTAATTAATGAT	NA	False	NA	NA	False	NA	NA	NA	8857905	8857737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_8857700_8857900
m54284U_201217_021426/151455550/ccs	chr11	+	312	1	Intergenic	novelGene_6237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATCTTAAAAAAAA	4061	False	NA	NA	False	NA	NA	NA	95829291	95829603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95829300_95829600
m54284U_201217_021426/151586058/ccs	chr8	-	211	1	Intergenic	novelGene_4537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATAGCTGCGTAGTACT	NA	False	NA	NA	False	NA	NA	NA	118584892	118584681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_118584700_118584900
m54284U_201217_021426/151586404/ccs	chr8	+	203	1	Intergenic	novelGene_4226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAATGGTCAAAAT	8336	False	NA	NA	False	NA	NA	NA	23093919	23094122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_23093900_23094100
m54284U_201217_021426/151717354/ccs	chr4	-	187	1	Intergenic	novelGene_2136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAGGCTCTAATCTCTAA	NA	False	NA	NA	False	NA	NA	NA	128874780	128874593	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_128874600_128874800
m54284U_201217_021426/151783282/ccs	chr14	-	191	1	Intergenic	novelGene_7374	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGGTAGCAACAGTGCAA	NA	False	NA	NA	False	NA	NA	NA	26929437	26929246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26929200_26929400
m54284U_201217_021426/151848208/ccs	chr4	-	165	1	Intergenic	novelGene_1921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATCTTTTTAAAAATT	NA	False	NA	NA	False	NA	NA	NA	83504965	83504800	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_83504800_83505000
m54284U_201217_021426/151848495/ccs	chr4	-	176	1	Intergenic	novelGene_2066	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTTATTTGCCA	1166	False	NA	NA	False	NA	NA	NA	119382667	119382491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_119382500_119382700
m54284U_201217_021426/151913707/ccs	chr12	+	177	1	Intergenic	novelGene_6671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTAACTTTTCATG	NA	False	NA	NA	False	NA	NA	NA	64376674	64376851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_64376700_64376900
m54284U_201217_021426/151978228/ccs	chr8	-	172	1	Intergenic	novelGene_4599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	125186021	125185849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_125185800_125186000
m54284U_201217_021426/15205435/ccs	chr9	-	4329	1	NIC	ENSMUSG00000032330.8	novel	659	4	NA	NA	-24	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTCCCTTTTCACT	NA	False	NA	-14	True	AATAAA	-16	NA	79667016	79662687	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_79662700_79667000
m54284U_201217_021426/15206196/ccs	chr10	+	1773	1	Intergenic	novelGene_5352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACTCAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	62666457	62668230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_62666500_62668200
m54284U_201217_021426/15206322/ccs	chr18	+	175	1	Intergenic	novelGene_9047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTAAAAAAATTACAC	NA	False	NA	NA	False	NA	NA	NA	80202226	80202401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_80202200_80202400
m54284U_201217_021426/152109533/ccs	chr14	-	193	1	Intergenic	novelGene_7580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACAACTGTATTTTTTA	NA	False	NA	NA	False	NA	NA	NA	99599002	99598809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_99598800_99599000
m54284U_201217_021426/152175278/ccs	chr7	-	3181	1	NIC	ENSMUSG00000048330.15	novel	5281	6	NA	NA	0	602	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTCTGGGCTAGAGA	NA	False	NA	NA	False	NA	NA	NA	108682529	108679348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_108679300_108682500
m54284U_201217_021426/152372854/ccs	chr17	-	3661	1	NIC	ENSMUSG00000008668.16	novel	527	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCGTCTCAGTTTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	34174634	34170973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_34171000_34174600
m54284U_201217_021426/152373384/ccs	chr4	-	173	1	Intergenic	novelGene_2417	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTAAGAAATGAATCT	NA	False	NA	NA	False	NA	NA	NA	154067787	154067614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_154067600_154067800
m54284U_201217_021426/152437999/ccs	chr13	+	193	1	Intergenic	novelGene_7194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATCCCTTTTCCCTCG	NA	False	NA	NA	False	NA	NA	NA	68138591	68138784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_68138600_68138800
m54284U_201217_021426/152439336/ccs	chr4	+	184	1	Intergenic	novelGene_2184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGATAATAGATTACA	NA	False	NA	NA	False	NA	NA	NA	131888787	131888971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_131888800_131889000
m54284U_201217_021426/152502711/ccs	chr2	+	186	1	Intergenic	novelGene_1014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGCCTCCTCCTCTCT	NA	False	NA	NA	False	NA	NA	NA	120175643	120175829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_120175600_120175800
m54284U_201217_021426/152503883/ccs	chrX	-	189	1	Intergenic	novelGene_9458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTGGGAACTTTTTGT	NA	False	NA	NA	False	NA	NA	NA	50847830	50847641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_50847600_50847800
m54284U_201217_021426/152504258/ccs	chr3	-	189	1	Intergenic	novelGene_1675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGTGACAACATACCAC	NA	False	NA	NA	False	NA	NA	NA	127722721	127722532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_127722500_127722700
m54284U_201217_021426/152568034/ccs	chr8	-	189	1	Intergenic	novelGene_4617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCCTGGTGGAGTTT	NA	False	NA	NA	False	NA	NA	NA	127935257	127935068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_127935100_127935300
m54284U_201217_021426/152569761/ccs	chr8	-	181	1	Intergenic	novelGene_4348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTTTGCTCTACA	NA	False	NA	NA	False	NA	NA	NA	75741596	75741415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_75741400_75741600
m54284U_201217_021426/152570495/ccs	chr9	-	178	1	Intergenic	novelGene_4797	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCTTCCTGTAAT	NA	False	NA	NA	False	NA	NA	NA	57006016	57005838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_57005800_57006000
m54284U_201217_021426/152635255/ccs	chr15	-	199	1	Intergenic	novelGene_7692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCAGTCACTGGCTTA	7478	False	NA	NA	False	NA	NA	NA	38247824	38247625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_38247600_38247800
m54284U_201217_021426/152700128/ccs	chr14	-	175	1	Intergenic	novelGene_7433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	491	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAATTAATTAATTA	4428	False	NA	NA	False	NA	NA	NA	51142356	51142181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_51142200_51142400
m54284U_201217_021426/152700959/ccs	chr7	+	330	1	Intergenic	novelGene_3907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGAGGACAATGTCCCCT	NA	False	NA	NA	False	TTTAAA	-14	NA	79658795	79659125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79658800_79659100
m54284U_201217_021426/152701622/ccs	chr13	+	192	1	Intergenic	novelGene_7187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGACCGGAGGACCCCA	NA	False	NA	NA	False	NA	NA	NA	67377046	67377238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_67377000_67377200
m54284U_201217_021426/15270235/ccs	chr14	-	2738	1	NIC	ENSMUSG00000021905.15	novel	1057	4	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTGTCTTTTATTTT	NA	False	NA	NA	False	NA	NA	NA	31807566	31804828	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_31804800_31807600
m54284U_201217_021426/15271432/ccs	chr6	+	206	1	Intergenic	novelGene_3528	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAAGTTATTTTTCAAA	5130	False	NA	NA	False	NA	NA	NA	128443945	128444151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_128443900_128444200
m54284U_201217_021426/152832753/ccs	chr12	+	197	1	Intergenic	novelGene_6747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAGGCACTATAAAAAAAAAA	7072	False	NA	NA	False	NA	NA	NA	79262384	79262581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_79262400_79262600
m54284U_201217_021426/153026586/ccs	chr10	+	185	1	Intergenic	novelGene_5312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATAAAGAAAAGAATCAC	NA	False	NA	NA	False	NA	NA	NA	59772662	59772847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_59772700_59772800
m54284U_201217_021426/153027778/ccs	chr10	-	187	1	Intergenic	novelGene_5441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGCACAGGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	79728692	79728505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_79728500_79728700
m54284U_201217_021426/153093156/ccs	chr1	-	273	1	Intergenic	novelGene_271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGAATTGTCTCATTT	NA	False	NA	NA	False	NA	NA	NA	117416394	117416121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_117416100_117416400
m54284U_201217_021426/153093480/ccs	chr4	-	183	1	Intergenic	novelGene_2353	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAAATATTCTGGAACT	NA	False	NA	NA	False	NA	NA	NA	147298263	147298080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_147298100_147298300
m54284U_201217_021426/153094086/ccs	chr17	-	193	1	Intergenic	novelGene_8458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGGGCATAGCTTCTGCT	2645	False	NA	NA	False	NA	NA	NA	28453004	28452811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_28452800_28453000
m54284U_201217_021426/153224434/ccs	chr2	-	180	1	Intergenic	novelGene_1301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCACATAATTATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	176878534	176878354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_176878400_176878500
m54284U_201217_021426/15335502/ccs	chr5	-	194	1	Intergenic	novelGene_2791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTAGTGGGTACAAAGTT	8112	False	NA	-22	True	NA	NA	NA	114845469	114845275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_114845300_114845500
m54284U_201217_021426/153355080/ccs	chr5	+	194	1	Intergenic	novelGene_2610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAAGTTTGTTGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	72964158	72964352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_72964200_72964400
m54284U_201217_021426/153356008/ccs	chr13	-	179	1	Intergenic	novelGene_7135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTAGTTGGTTTAAATA	NA	False	NA	NA	False	NA	NA	NA	62275291	62275112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_62275100_62275300
m54284U_201217_021426/15336612/ccs	chr13	-	179	1	Intergenic	novelGene_7053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAACGAAAAG	NA	False	NA	NA	False	NA	NA	NA	45277894	45277715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_45277700_45277900
m54284U_201217_021426/153487636/ccs	chr4	-	176	1	Intergenic	novelGene_1794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	34530813	34530637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_34530600_34530800
m54284U_201217_021426/153550976/ccs	chrX	+	191	1	Intergenic	novelGene_9670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGTGCCACCACCCAAG	5799	False	NA	NA	False	NA	NA	NA	150559810	150560001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_150559800_150560000
m54284U_201217_021426/153552035/ccs	chr4	-	177	1	Intergenic	novelGene_1824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAAGGGGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	43054110	43053933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_43053900_43054100
m54284U_201217_021426/153552514/ccs	chr17	+	186	1	Intergenic	novelGene_8429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAAGACACCTTCAATAA	NA	False	NA	NA	False	NA	NA	NA	26312074	26312260	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_26312100_26312300
m54284U_201217_021426/153749496/ccs	chr17	-	216	1	Intergenic	novelGene_8635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGTGGAAGCATGAGA	NA	False	NA	NA	False	AATAAA	-37	NA	47974098	47973882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_47973900_47974100
m54284U_201217_021426/153813163/ccs	chr16	-	160	1	Intergenic	novelGene_8026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	3666556	3666396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_3666400_3666600
m54284U_201217_021426/153880582/ccs	chr8	-	173	1	Intergenic	novelGene_4269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTTAAACTCATCA	NA	False	NA	NA	False	NA	NA	NA	34539319	34539146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_34539100_34539300
m54284U_201217_021426/153880621/ccs	chr5	-	208	1	Intergenic	novelGene_3035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	308	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCTGTGGCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	142631463	142631255	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142631300_142631500
m54284U_201217_021426/153945987/ccs	chr2	-	209	1	Intergenic	novelGene_867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTACAGGCATAACCCAC	NA	False	NA	NA	False	NA	NA	NA	74616737	74616528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_74616500_74616700
m54284U_201217_021426/154009643/ccs	chr13	+	223	1	Genic_Genomic	ENSMUSG00000060404.4	novel	NA	NA	NA	NA	3256	77	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAACACAGAAGCTAAC	7599	False	NA	NA	False	NA	NA	NA	21303119	21303342	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_+_21303100_21303300
m54284U_201217_021426/15401109/ccs	chr14	-	176	1	Intergenic	novelGene_7402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGATTGATTCCTCT	NA	False	NA	NA	False	NA	NA	NA	40803542	40803366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_40803400_40803500
m54284U_201217_021426/154011784/ccs	chr18	-	191	1	Intergenic	novelGene_9039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAGTCAGACCCT	NA	False	NA	NA	False	NA	NA	NA	77815605	77815414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77815400_77815600
m54284U_201217_021426/15401665/ccs	chr12	+	176	1	Intergenic	novelGene_6596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATAGGCAAGAATT	7856	False	NA	NA	False	NA	NA	NA	24839476	24839652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_24839500_24839700
m54284U_201217_021426/15402668/ccs	chr9	-	175	1	Intergenic	novelGene_4710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTATTTTATGTGCA	NA	False	NA	NA	False	NA	NA	NA	37305518	37305343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_37305300_37305500
m54284U_201217_021426/15403589/ccs	chr10	-	177	1	Intergenic	novelGene_5568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCAGAGCAAACAGAGAT	NA	False	NA	NA	False	NA	NA	NA	120094197	120094020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_120094000_120094200
m54284U_201217_021426/154077732/ccs	chr9	-	178	1	Intergenic	novelGene_4973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAGAATGAA	5917	False	NA	NA	False	NA	NA	NA	78475820	78475642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_78475600_78475800
m54284U_201217_021426/154142738/ccs	chr1	-	168	1	Intergenic	novelGene_138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAGAAAGGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	59378365	59378197	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59378200_59378400
m54284U_201217_021426/154274645/ccs	chr12	-	185	1	Intergenic	novelGene_6861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATTTTATTACATTTGAA	NA	False	NA	NA	False	NA	NA	NA	103518744	103518559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_103518600_103518700
m54284U_201217_021426/154339050/ccs	chr7	+	190	1	Intergenic	novelGene_3648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCCCCAGGAGATCCTAA	NA	False	NA	NA	False	NA	NA	NA	12456040	12456230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_12456000_12456200
m54284U_201217_021426/154339087/ccs	chr11	+	186	1	Intergenic	novelGene_6444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGAAAGAAAGAAAG	5723	False	NA	NA	False	NA	NA	NA	114726120	114726306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_114726100_114726300
m54284U_201217_021426/154340114/ccs	chr1	+	2322	1	FSM	ENSMUSG00000026698.9	ENSMUST00000193784.2	4207	1	74	1811	0	-707	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATTGTCTAGTATTTT	NA	False	NA	10	True	ATTAAA	-13	NA	161796870	161799192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_161796900_161799200
m54284U_201217_021426/154403609/ccs	chr11	-	488	2	Intergenic	novelGene_5728	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTCTTGGTTCCATT	NA	False	NA	NA	False	NA	NA	NA	22560431	22550332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_22550607_22560217
m54284U_201217_021426/154469980/ccs	chr9	-	5280	9	NNC	ENSMUSG00000032449.14	novel	5227	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	451.468143255978	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTCTTGTTTCCACCT	NA	False	NA	0	True	NA	NA	NA	96993210	96957013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_-_96961293_96962245_96962536_96967109_96967177_96971543_96971581_96971913_96971930_96975129_96975231_96979155_96979234_96982127_96982293_96992963
m54284U_201217_021426/154470768/ccs	chr2	-	179	1	Intergenic	novelGene_841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAGAAAAAAAAAAGTAAG	7115	False	NA	NA	False	NA	NA	NA	69792572	69792393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_69792400_69792600
m54284U_201217_021426/154535121/ccs	chr17	-	1933	1	Intergenic	novelGene_8404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCAGCAAGTTTGAGTC	9562	False	NA	-22	True	AATAAA	-17	NA	24241827	24239894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24239900_24241800
m54284U_201217_021426/154535542/ccs	chr15	-	180	1	Intergenic	novelGene_7627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGGAAGACTGC	8788	False	NA	NA	False	NA	NA	NA	8634439	8634259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_8634300_8634400
m54284U_201217_021426/154600460/ccs	chr4	+	178	1	Intergenic	novelGene_2395	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAGAAACTTCTT	NA	False	NA	NA	False	NA	NA	NA	150310964	150311142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_150311000_150311100
m54284U_201217_021426/154601061/ccs	chrX	+	148	1	Intergenic	novelGene_9529	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTATATGTAGCGTT	NA	False	NA	NA	False	AATAAA	-12	NA	92384937	92385085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_92384900_92385100
m54284U_201217_021426/154601123/ccs	chr9	-	173	1	Intergenic	novelGene_4622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	3302346	3302173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_3302200_3302300
m54284U_201217_021426/154665493/ccs	chr9	-	176	1	Intergenic	novelGene_4974	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTTAAATATGGGTA	NA	False	NA	NA	False	NA	NA	NA	78509139	78508963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_78509000_78509100
m54284U_201217_021426/154665597/ccs	chr13	-	271	1	Intergenic	novelGene_7228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACATAGATATACAACGTA	NA	False	NA	NA	False	NA	NA	NA	90890026	90889755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_90889800_90890000
m54284U_201217_021426/154666969/ccs	chr4	-	187	1	Intergenic	novelGene_1826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAATTAAAATTAAAAAATT	NA	False	NA	NA	False	NA	NA	NA	43088848	43088661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_43088700_43088800
m54284U_201217_021426/154731404/ccs	chr3	-	203	1	Intergenic	novelGene_1473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCCTGACTAAGACAGC	8508	False	NA	NA	False	TTTAAA	-10	NA	87840607	87840404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_87840400_87840600
m54284U_201217_021426/154864387/ccs	chr2	-	200	1	Intergenic	novelGene_1336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATCTTAAAA	NA	False	NA	NA	False	NA	NA	NA	181599768	181599568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181599600_181599800
m54284U_201217_021426/154929714/ccs	chr4	-	179	1	Intergenic	novelGene_2154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACAAGGCCGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	129352717	129352538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129352500_129352700
m54284U_201217_021426/154929968/ccs	chr19	-	188	1	Intergenic	novelGene_9174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCATTACATTTTAATA	NA	False	NA	NA	False	NA	NA	NA	20399035	20398847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_20398800_20399000
m54284U_201217_021426/154994806/ccs	chr15	-	214	1	Intergenic	novelGene_7623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTTCAACATCCTTAG	NA	False	NA	NA	False	NA	NA	NA	8227518	8227304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_8227300_8227500
m54284U_201217_021426/155060844/ccs	chr11	-	170	1	Intergenic	novelGene_5808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAGAAAAGGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	51508490	51508320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_51508300_51508500
m54284U_201217_021426/155190013/ccs	chrX	-	191	1	Intergenic	novelGene_9593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGACTCTTACAACTTT	NA	False	NA	NA	False	NA	NA	NA	103089536	103089345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_103089300_103089500
m54284U_201217_021426/155257013/ccs	chrX	-	747	1	FSM	ENSMUSG00000083364.5	ENSMUST00000122000.2	393	1	-53	-301	-53	301	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATGAGCTGCTAAATG	NA	False	NA	NA	False	AATAAA	-30	NA	13084894	13084147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_13084100_13084900
m54284U_201217_021426/15532149/ccs	chr17	+	3115	9	NIC	ENSMUSG00000039656.18	novel	2577	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	122	junction_6	39.7169674068905	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTTCTGGACTGAGAT	NA	False	NA	21	True	CATAAA	-21	NA	34250785	34257373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
m54284U_201217_021426/155388176/ccs	chr12	+	176	1	Intergenic	novelGene_6573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTTAAAAAAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	17009557	17009733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_17009600_17009700
m54284U_201217_021426/155453252/ccs	chr16	-	186	1	Intergenic	novelGene_8278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	55358031	55357845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_55357800_55358000
m54284U_201217_021426/155453446/ccs	chr17	-	1722	1	Intergenic	novelGene_8375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATAATGATCAAAATCAA	NA	False	NA	NA	False	NA	NA	NA	14004390	14002668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_14002700_14004400
m54284U_201217_021426/155517371/ccs	chr7	-	208	1	Intergenic	novelGene_3846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAAAAGAAAATCTTGGT	2497	False	NA	NA	False	NA	NA	NA	45177056	45176848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_45176800_45177100
m54284U_201217_021426/155518866/ccs	chr1	+	171	1	Intergenic	novelGene_181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTTTTTGGTTTT	NA	False	NA	NA	False	NA	NA	NA	74101309	74101480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74101300_74101500
m54284U_201217_021426/155519792/ccs	chr1	-	136	1	Intergenic	novelGene_130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAACAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	58024185	58024049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_58024000_58024200
m54284U_201217_021426/155583623/ccs	chr7	+	191	1	Intergenic	novelGene_3633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAGA	8860	False	NA	NA	False	NA	NA	NA	4821843	4822034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_4821800_4822000
m54284U_201217_021426/155650083/ccs	chr9	-	188	1	Intergenic	novelGene_5068	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGCACTCAGTCTCCT	NA	False	NA	NA	False	NA	NA	NA	106794445	106794257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_106794300_106794400
m54284U_201217_021426/155713969/ccs	chr12	-	195	1	Intergenic	novelGene_6679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATAGAACACCTT	NA	False	NA	NA	False	NA	NA	NA	69214074	69213879	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_69213900_69214100
m54284U_201217_021426/155715689/ccs	chr11	+	239	1	Intergenic	novelGene_5843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATAGTTGATCCCATCCC	NA	False	NA	NA	False	NA	NA	NA	54689592	54689831	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_54689600_54689800
m54284U_201217_021426/155780324/ccs	chr1	-	187	1	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	34398704	34398517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_34398500_34398700
m54284U_201217_021426/155781132/ccs	chr8	-	182	1	Intergenic	novelGene_4296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCTTGCTAGTG	NA	False	NA	NA	False	NA	NA	NA	54862022	54861840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_54861800_54862000
m54284U_201217_021426/155845918/ccs	chr15	-	1779	1	Genic_Genomic	ENSMUSG00000033837.6	novel	NA	NA	NA	NA	193	394	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCAAGTCTGGTATTGG	NA	False	NA	-6	True	AGTAAA	-18	NA	76553809	76552030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr15_-_76552000_76553800
m54284U_201217_021426/155846781/ccs	chr13	+	194	1	Intergenic	novelGene_7237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	93402846	93403040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_93402800_93403000
m54284U_201217_021426/155911328/ccs	chr10	-	176	1	Intergenic	novelGene_5339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTCTCTGATATTCTA	NA	False	NA	NA	False	NA	NA	NA	61494650	61494474	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_61494500_61494600
m54284U_201217_021426/155911596/ccs	chr16	-	175	1	Intergenic	novelGene_8043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTTTCTATTTTTACC	NA	False	NA	NA	False	NA	NA	NA	8587396	8587221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_8587200_8587400
m54284U_201217_021426/155911949/ccs	chr16	-	179	1	Intergenic	novelGene_8182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAGATTGGAGAGTTTT	4303	False	NA	NA	False	NA	NA	NA	30263245	30263066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_30263100_30263200
m54284U_201217_021426/155912029/ccs	chr11	-	185	1	Intergenic	novelGene_6414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGACCTTTCAGGGAGA	NA	False	NA	NA	False	NA	NA	NA	107197803	107197618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107197600_107197800
m54284U_201217_021426/155912653/ccs	chr4	-	172	1	Intergenic	novelGene_2045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATCTGATCCTG	NA	False	NA	NA	False	NA	NA	NA	117625725	117625553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_117625600_117625700
m54284U_201217_021426/15598589/ccs	chr3	-	5181	1	NIC	ENSMUSG00000099370.2	novel	1026	3	NA	NA	99	-2612	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTAGCTTGTCTTGGTCCC	NA	False	NA	-3	True	NA	NA	NA	75562939	75557758	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_75557800_75562900
m54284U_201217_021426/15598796/ccs	chr15	-	193	1	Intergenic	novelGene_7971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAGTTCCAGGACAGC	NA	False	NA	NA	False	NA	NA	NA	99708959	99708766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99708800_99709000
m54284U_201217_021426/156041387/ccs	chr4	+	191	1	Intergenic	novelGene_2194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATTTGTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	132254929	132255120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132254900_132255100
m54284U_201217_021426/156108592/ccs	chr18	-	234	1	Intergenic	novelGene_8796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGTGAAGCCAATTAACA	NA	False	NA	NA	False	NA	NA	NA	4319612	4319378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_4319400_4319600
m54284U_201217_021426/156172754/ccs	chr9	-	174	1	Intergenic	novelGene_5018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATCCCTCCTGCA	NA	False	NA	NA	False	NA	NA	NA	96586601	96586427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_96586400_96586600
m54284U_201217_021426/156369405/ccs	chr15	+	190	1	Intergenic	novelGene_7964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAAACAAGCATAAA	NA	False	NA	NA	False	NA	NA	NA	99342393	99342583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99342400_99342600
m54284U_201217_021426/156500139/ccs	chr11	-	202	1	Intergenic	novelGene_6201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTAGCAGGGCATTGT	9506	False	NA	NA	False	NA	NA	NA	89085770	89085568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_89085600_89085800
m54284U_201217_021426/156501913/ccs	chr18	-	193	1	Intergenic	novelGene_8944	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	303	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACGAAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	44511875	44511682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_44511700_44511900
m54284U_201217_021426/156566733/ccs	chr9	-	165	1	Intergenic	novelGene_4719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	40747224	40747059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_40747100_40747200
m54284U_201217_021426/156631093/ccs	chr11	-	223	1	Intergenic	novelGene_6449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTAACTCTGGTCTCC	NA	False	NA	NA	False	NA	NA	NA	115400310	115400087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115400100_115400300
m54284U_201217_021426/15663360/ccs	chr11	+	193	1	Intergenic	novelGene_5676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTCCTGTGTGGCCCTG	NA	False	NA	NA	False	NA	NA	NA	5026543	5026736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_5026500_5026700
m54284U_201217_021426/15665790/ccs	chr6	-	176	1	Intergenic	novelGene_3136	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATGTATACATAGA	NA	False	NA	NA	False	NA	NA	NA	29777092	29776916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_29776900_29777100
m54284U_201217_021426/156762724/ccs	chr10	-	176	1	Intergenic	novelGene_5444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAATTGTGTTCGG	NA	False	NA	NA	False	NA	NA	NA	79947841	79947665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_79947700_79947800
m54284U_201217_021426/156763071/ccs	chr15	+	1196	1	Intergenic	novelGene_7638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAACCAACCAACCAAAAA	NA	False	NA	NA	False	NA	NA	NA	10630389	10631585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_10630400_10631600
m54284U_201217_021426/156764481/ccs	chr7	-	174	1	Intergenic	novelGene_3673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATTTTAAAAAAACAA	8850	False	NA	NA	False	NA	NA	NA	16491478	16491304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_16491300_16491500
m54284U_201217_021426/156830055/ccs	chr1	-	156	1	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	12778813	12778657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_12778700_12778800
m54284U_201217_021426/156896020/ccs	chr7	-	170	1	Antisense	novelGene_ENSMUSG00000030842.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCATTTCCTAGCTGGG	NA	False	NA	NA	False	NA	NA	NA	101561732	101561562	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_101561600_101561700
m54284U_201217_021426/156959844/ccs	chr2	+	191	1	Intergenic	novelGene_1227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATTTGCTATGGGA	3999	False	NA	NA	False	NA	NA	NA	165734089	165734280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_165734100_165734300
m54284U_201217_021426/156960983/ccs	chr11	+	4965	1	NIC	ENSMUSG00000020305.14	novel	3228	10	NA	NA	0	-70348	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAGACCAGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	30904447	30909412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_30904400_30909400
m54284U_201217_021426/157090564/ccs	chrX	-	232	1	Intergenic	novelGene_9667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTACAGAATTCTCATGAT	NA	False	NA	NA	False	NA	NA	NA	149997885	149997653	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_149997700_149997900
m54284U_201217_021426/157091290/ccs	chr13	-	187	1	Intergenic	novelGene_7325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACAGTTGCTTTCGCTG	NA	False	NA	NA	False	NA	NA	NA	118271788	118271601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_118271600_118271800
m54284U_201217_021426/157157266/ccs	chr19	-	214	1	Intergenic	novelGene_9242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGCCAGGAATTTGAGAGC	NA	False	NA	NA	False	NA	NA	NA	38203862	38203648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_38203600_38203900
m54284U_201217_021426/15728796/ccs	chr19	-	149	1	Intergenic	novelGene_9285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAACAAA	-13	True	NA	NA	False	NA	NA	NA	44696401	44696252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_44696300_44696400
m54284U_201217_021426/15731333/ccs	chr11	-	220	1	Intergenic	novelGene_6298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTAGGGAAGGAATGG	607	False	NA	NA	False	NA	NA	NA	98100906	98100686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_98100700_98100900
m54284U_201217_021426/1573402/ccs	chr2	-	159	1	Intergenic	novelGene_574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	4079	False	NA	NA	False	NA	NA	NA	5079788	5079629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_5079600_5079800
m54284U_201217_021426/157352447/ccs	chr2	-	172	1	Intergenic	novelGene_1210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTTAACAACAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	163933381	163933209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_163933200_163933400
m54284U_201217_021426/1574018/ccs	chr17	-	166	1	Intergenic	novelGene_8734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAAATGGGATTTGGA	NA	False	NA	NA	False	NA	NA	NA	79222927	79222761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_79222800_79222900
m54284U_201217_021426/157420249/ccs	chr15	+	188	1	Intergenic	novelGene_7886	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTAGGACAGCTACAAG	NA	False	NA	NA	False	NA	NA	NA	84903065	84903253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_84903100_84903300
m54284U_201217_021426/157485846/ccs	chr6	-	153	1	Intergenic	novelGene_3173	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAAAATTCTCATGACC	NA	False	NA	NA	False	NA	NA	NA	35154233	35154080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_35154100_35154200
m54284U_201217_021426/157550042/ccs	chr11	+	172	1	Intergenic	novelGene_6305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAATATTTAAAA	2126	False	NA	NA	False	NA	NA	NA	98648889	98649061	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_98648900_98649100
m54284U_201217_021426/157680442/ccs	chr11	-	189	1	Intergenic	novelGene_6386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAATCCGCCTGCCT	9096	False	NA	NA	False	NA	NA	NA	106336006	106335817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106335800_106336000
m54284U_201217_021426/157681348/ccs	chr8	-	175	1	Intergenic	novelGene_4403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAGTATAATGAA	NA	False	NA	NA	False	NA	NA	NA	91554537	91554362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_91554400_91554500
m54284U_201217_021426/157811264/ccs	chr17	-	161	1	Intergenic	novelGene_8562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGCTGAGCAAGCCAATA	NA	False	NA	NA	False	NA	NA	NA	35807728	35807567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35807600_35807700
m54284U_201217_021426/157877431/ccs	chr1	-	5204	1	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAACTGTCTTGGCTAC	NA	False	NA	NA	False	NA	NA	NA	10892415	10887211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_10887200_10892400
m54284U_201217_021426/157877498/ccs	chr15	-	205	1	Intergenic	novelGene_7982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATCAATGAAACGTTTA	NA	False	NA	NA	False	NA	NA	NA	100052819	100052614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100052600_100052800
m54284U_201217_021426/157879094/ccs	chr17	-	151	1	Intergenic	novelGene_8676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATCAATAAATCTTTG	8391	False	NA	NA	False	NA	NA	NA	65877384	65877233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_65877200_65877400
m54284U_201217_021426/157943870/ccs	chr6	-	197	1	Intergenic	novelGene_3461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAGAGAGAGAGAGCAAT	8422	False	NA	NA	False	NA	NA	NA	120465091	120464894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120464900_120465100
m54284U_201217_021426/157944049/ccs	chr2	+	2491	1	Intergenic	novelGene_1134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCTGACCACTACTTAC	NA	False	NA	NA	False	NA	NA	NA	153256052	153258543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_153256100_153258500
m54284U_201217_021426/15794582/ccs	chr5	-	1903	5	NIC	ENSMUSG00000029348.12	novel	2678	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	10.2316909648406	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCATCCTAAATTTCTG	NA	False	NA	-1	True	AATAGA	-28	NA	112542732	112533309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_112533728_112534624_112534739_112539023_112540122_112541325_112541450_112542583
m54284U_201217_021426/158009412/ccs	chr10	+	197	1	Intergenic	novelGene_5555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTTAGTATTTGTTTG	NA	False	NA	NA	False	NA	NA	NA	117436414	117436611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_117436400_117436600
m54284U_201217_021426/158074350/ccs	chr4	+	160	1	Intergenic	novelGene_1817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGCGAGCAGAGAA	NA	False	NA	NA	False	NA	NA	NA	41271322	41271482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_41271300_41271500
m54284U_201217_021426/158204458/ccs	chr1	-	1351	1	NIC	ENSMUSG00000026478.15	novel	7622	28	NA	NA	-12290	-12784	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAGGTAGAAAAGGTA	2503	False	NA	NA	False	NA	NA	NA	153138497	153137146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_153137100_153138500
m54284U_201217_021426/158206655/ccs	chr10	-	176	1	Intergenic	novelGene_5492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTTAAA	4051	False	NA	NA	False	NA	NA	NA	89253767	89253591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_89253600_89253800
m54284U_201217_021426/158270338/ccs	chr3	-	175	1	Intergenic	novelGene_1432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAAGAGTGCCCTTC	NA	False	NA	NA	False	NA	NA	NA	69606419	69606244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_69606200_69606400
m54284U_201217_021426/158335333/ccs	chr15	-	206	1	Intergenic	novelGene_7846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATATACGGCGGTTAAGA	NA	False	NA	NA	False	AAAAAG	-6	NA	81551106	81550900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81550900_81551100
m54284U_201217_021426/158336492/ccs	chr19	-	188	1	Intergenic	novelGene_9344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTGCAGCTCTAAAGAG	1523	False	NA	NA	False	NA	NA	NA	56388512	56388324	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_56388300_56388500
m54284U_201217_021426/158336606/ccs	chr3	-	236	1	Intergenic	novelGene_1513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATATTTTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	89034609	89034373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89034400_89034600
m54284U_201217_021426/158402977/ccs	chr15	-	188	1	Intergenic	novelGene_7975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTTACCTTTTAAGATAA	2620	False	NA	NA	False	NA	NA	NA	99770266	99770078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99770100_99770300
m54284U_201217_021426/158403233/ccs	chr8	-	159	1	Intergenic	novelGene_4200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAGATCATAAACT	NA	False	NA	NA	False	NA	NA	NA	12156590	12156431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_12156400_12156600
m54284U_201217_021426/158466107/ccs	chr5	-	199	1	Intergenic	novelGene_2586	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATACTAAAAATAACGAT	NA	False	NA	NA	False	NA	NA	NA	65496822	65496623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_65496600_65496800
m54284U_201217_021426/158466721/ccs	chr13	-	199	1	Intergenic	novelGene_7184	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGATGGCCTATACCAAAG	8063	False	NA	NA	False	NA	NA	NA	67100514	67100315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_67100300_67100500
m54284U_201217_021426/158598036/ccs	chr7	+	155	1	Intergenic	novelGene_3758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	29426990	29427145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_29427000_29427100
m54284U_201217_021426/15862441/ccs	chr3	+	176	1	Intergenic	novelGene_1640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAAATCTCTTC	NA	False	NA	NA	False	NA	NA	NA	116302538	116302714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_116302500_116302700
m54284U_201217_021426/158665556/ccs	chr9	-	175	1	Intergenic	novelGene_4849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAAGAAGAAGTT	3899	False	NA	NA	False	NA	NA	NA	62793021	62792846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_62792800_62793000
m54284U_201217_021426/158795620/ccs	chr13	-	193	1	Intergenic	novelGene_7319	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAGGTGAGAGATTAC	6924	False	NA	NA	False	NA	NA	NA	114381149	114380956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_114381000_114381100
m54284U_201217_021426/158796536/ccs	chr11	-	212	1	Intergenic	novelGene_6074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAAAATCTAAGCCAGGG	NA	False	NA	NA	False	TTTAAA	-7	NA	78872526	78872314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_78872300_78872500
m54284U_201217_021426/158861965/ccs	chr2	-	172	1	Intergenic	novelGene_565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAGTATGAAAAA	NA	False	NA	NA	False	NA	NA	NA	3568714	3568542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_3568500_3568700
m54284U_201217_021426/158925210/ccs	chr6	+	193	1	Intergenic	novelGene_3317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGTGCTCTTAACCGT	NA	False	NA	NA	False	NA	NA	NA	71266562	71266755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_71266600_71266800
m54284U_201217_021426/159057431/ccs	chr4	+	356	1	Intergenic	novelGene_2266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAGACAAAAAAATTATTT	NA	False	NA	NA	False	NA	NA	NA	137090672	137091028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_137090700_137091000
m54284U_201217_021426/159122731/ccs	chr7	+	169	1	Intergenic	novelGene_3671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATGTACTGGCTAG	NA	False	NA	NA	False	NA	NA	NA	16389224	16389393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_16389200_16389400
m54284U_201217_021426/159252692/ccs	chr7	+	171	1	Intergenic	novelGene_4153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAGATTCTAATCTGG	NA	False	NA	NA	False	NA	NA	NA	140545994	140546165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140546000_140546200
m54284U_201217_021426/15927580/ccs	chr8	-	196	1	Intergenic	novelGene_4432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTTTTCTTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	105309347	105309151	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_105309200_105309300
m54284U_201217_021426/159319955/ccs	chr4	-	174	1	Intergenic	novelGene_1928	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTTCCCATACT	2499	False	NA	NA	False	NA	NA	NA	87159187	87159013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_87159000_87159200
m54284U_201217_021426/159383654/ccs	chr15	-	199	1	Intergenic	novelGene_7849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTGTATGTACATTA	NA	False	NA	NA	False	NA	NA	NA	81627026	81626827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81626800_81627000
m54284U_201217_021426/159384081/ccs	chr11	-	173	1	Intergenic	novelGene_5671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAGAAACCAC	3769	False	NA	NA	False	NA	NA	NA	4812890	4812717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_4812700_4812900
m54284U_201217_021426/159385583/ccs	chr11	+	188	1	Intergenic	novelGene_6422	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGAGTCACTCTCAGAA	NA	False	NA	NA	False	NA	NA	NA	107397891	107398079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_107397900_107398100
m54284U_201217_021426/159449877/ccs	chr2	-	190	1	Intergenic	novelGene_872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTAGTGGGGAAACCCC	2436	False	NA	NA	False	NA	NA	NA	75465382	75465192	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_75465200_75465400
m54284U_201217_021426/159451880/ccs	chr5	-	173	1	Intergenic	novelGene_2616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGTGACATCTA	NA	False	NA	-1	True	NA	NA	NA	73478319	73478146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_73478100_73478300
m54284U_201217_021426/159514981/ccs	chr9	-	192	1	Intergenic	novelGene_4765	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAGTTATCCCCTGA	NA	False	NA	NA	False	NA	NA	NA	52062841	52062649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_52062600_52062800
m54284U_201217_021426/159515957/ccs	chr11	-	176	1	Intergenic	novelGene_6320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATTGTTACGGG	8660	False	NA	NA	False	NA	NA	NA	100195631	100195455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_100195500_100195600
m54284U_201217_021426/159581027/ccs	chr4	-	5274	7	NIC	ENSMUSG00000057637.14	novel	7304	10	NA	NA	0	-24156	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	17.3533538225004	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTGGTACCATTTCTT	NA	False	NA	-2	True	AATAAA	-26	NA	142939565	142858116	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142939454
m54284U_201217_021426/159583028/ccs	chr8	-	195	1	ISM	ENSMUSG00000110661.2	ENSMUST00000211921.2	4031	2	2683	2200	2683	-2200	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACATACACACGTCACCC	NA	False	NA	NA	False	TATAAA	-10	NA	96557620	96557425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr8_-_96557400_96557600
m54284U_201217_021426/159711768/ccs	chr11	-	202	1	Intergenic	novelGene_5778	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATCTGCAAAGCAGAAAT	NA	False	NA	NA	False	NA	NA	NA	37763745	37763543	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_37763500_37763700
m54284U_201217_021426/159713339/ccs	chrX	-	175	1	Intergenic	novelGene_9461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAACCACCTTCACTG	NA	False	NA	NA	False	NA	NA	NA	51299793	51299618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_51299600_51299800
m54284U_201217_021426/159778722/ccs	chrX	-	202	1	Intergenic	novelGene_9414	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCCTCTTGGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	35149179	35148977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_35149000_35149200
m54284U_201217_021426/159843682/ccs	chr6	-	202	1	Intergenic	novelGene_3123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAATGAAGCACGC	NA	False	NA	NA	False	NA	NA	NA	28786352	28786150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_28786200_28786400
m54284U_201217_021426/159910197/ccs	chr9	+	175	1	Intergenic	novelGene_5017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	96507339	96507514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_96507300_96507500
m54284U_201217_021426/15993057/ccs	chr13	-	526	1	FSM	ENSMUSG00000079941.2	ENSMUST00000044043.3	390	1	-31	-105	-31	105	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTATGGGTATTTTCCT	NA	False	NA	NA	False	NA	NA	NA	21685619	21685093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_21685100_21685600
m54284U_201217_021426/160040135/ccs	chr5	-	187	1	Intergenic	novelGene_2677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAGAAACAT	954	False	NA	NA	False	NA	NA	NA	92963824	92963637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92963600_92963800
m54284U_201217_021426/160041100/ccs	chr2	-	598	1	Intergenic	novelGene_1102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	144398061	144397463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_144397500_144398100
m54284U_201217_021426/160041669/ccs	chr6	-	194	1	Intergenic	novelGene_3253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTATAGCTTTCTGTGA	NA	False	NA	NA	False	NA	NA	NA	47890748	47890554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_47890600_47890700
m54284U_201217_021426/160237295/ccs	chr14	-	4245	1	ISM	ENSMUSG00000021936.15	ENSMUST00000111945.9	5756	12	65016	0	7086	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAGTTCTTCATTGAAA	8157	False	NA	0	True	AATAAA	-21	NA	33104099	33099854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_-_33099900_33104100
m54284U_201217_021426/160301503/ccs	chr4	+	178	1	Intergenic	novelGene_1812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAACAAAAAAGGCTTTAG	NA	False	NA	NA	False	NA	NA	NA	40943385	40943563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_40943400_40943600
m54284U_201217_021426/160303346/ccs	chr14	-	105	1	Intergenic	novelGene_7373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAAATCGGCTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	26896682	26896577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26896600_26896700
m54284U_201217_021426/160367162/ccs	chr16	+	177	1	Intergenic	novelGene_8333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAAAGAGC	NA	False	NA	NA	False	NA	NA	NA	95913776	95913953	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_95913800_95914000
m54284U_201217_021426/160368076/ccs	chr17	-	186	1	Intergenic	novelGene_8762	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATAATTATAATAGG	NA	False	NA	NA	False	NA	NA	NA	84624089	84623903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_84623900_84624100
m54284U_201217_021426/160368503/ccs	chr5	-	194	1	Intergenic	novelGene_2517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTTTGCAAAAATAAT	7714	False	NA	NA	False	NA	NA	NA	31185405	31185211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_31185200_31185400
m54284U_201217_021426/160432869/ccs	chr4	-	198	1	Intergenic	novelGene_1802	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTTAAGTCAATTATAA	NA	False	NA	NA	False	CATAAA	-15	NA	37501134	37500936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_37500900_37501100
m54284U_201217_021426/160432918/ccs	chr14	-	175	1	Intergenic	novelGene_7487	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGGGGGGGGGACTAC	NA	False	NA	NA	False	NA	NA	NA	57785755	57785580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_57785600_57785800
m54284U_201217_021426/160433024/ccs	chr7	-	158	1	Intergenic	novelGene_4090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAAATTTAA	9672	False	NA	NA	False	NA	NA	NA	126336032	126335874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_126335900_126336000
m54284U_201217_021426/160630995/ccs	chr8	-	4863	1	NIC	ENSMUSG00000031652.12	novel	6469	7	NA	NA	0	-36077	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAACAAGAGATTTACTTT	NA	False	NA	NA	False	NA	NA	NA	87611886	87607023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_87607000_87611900
m54284U_201217_021426/160697161/ccs	chr11	-	187	1	Intergenic	novelGene_6096	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAACAAGTTGATCT	NA	False	NA	NA	False	TTTAAA	-1	NA	79886962	79886775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79886800_79887000
m54284U_201217_021426/160760223/ccs	chr17	-	166	1	Intergenic	novelGene_8512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAAACCCCAC	5716	False	NA	NA	False	NA	NA	NA	31865316	31865150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_31865200_31865300
m54284U_201217_021426/160760231/ccs	chr11	-	182	1	Intergenic	novelGene_6405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAGAAAGAAAGAAAGAG	8540	False	NA	NA	False	NA	NA	NA	107007138	107006956	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107007000_107007100
m54284U_201217_021426/160761908/ccs	chr6	+	200	1	Intergenic	novelGene_3520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAGGTCATGTGC	3236	False	NA	12	True	NA	NA	NA	125556202	125556402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_125556200_125556400
m54284U_201217_021426/160826788/ccs	chr10	+	173	1	Intergenic	novelGene_5478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAAAGATGTGCC	NA	False	NA	NA	False	NA	NA	NA	83155270	83155443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_83155300_83155400
m54284U_201217_021426/160892383/ccs	chr11	+	175	1	Genic_Genomic	ENSMUSG00000083894.2	novel	NA	NA	NA	NA	1377	172	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGAATGCAGGGC	NA	False	NA	NA	False	NA	NA	NA	87359881	87360056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_87359900_87360100
m54284U_201217_021426/160958422/ccs	chr8	+	181	1	Intergenic	novelGene_4464	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAAAAAAAGGTGG	NA	False	NA	NA	False	NA	NA	NA	107650523	107650704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_107650500_107650700
m54284U_201217_021426/161022293/ccs	chr19	+	174	1	Intergenic	novelGene_9125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAAGTTTGTCCCCCT	1452	False	NA	NA	False	NA	NA	NA	6859082	6859256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6859100_6859300
m54284U_201217_021426/161024570/ccs	chr8	-	158	1	Intergenic	novelGene_4585	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATTTAAAAT	7571	False	NA	NA	False	NA	NA	NA	124142227	124142069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124142100_124142200
m54284U_201217_021426/161090367/ccs	chr9	+	4750	34	NIC	ENSMUSG00000036768.7	novel	4858	35	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	45.275546543186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAAATACTATGCCT	NA	False	NA	8	True	AATAAA	-18	NA	122780141	122847798	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_+_122780218_122788181_122788225_122788871_122789056_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
m54284U_201217_021426/161154943/ccs	chr19	+	177	1	Intergenic	novelGene_9122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGTCAAATTTT	2204	False	NA	NA	False	NA	NA	NA	6378752	6378929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_6378800_6378900
m54284U_201217_021426/161155041/ccs	chr4	+	205	1	Intergenic	novelGene_2166	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	130149684	130149889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_130149700_130149900
m54284U_201217_021426/161218905/ccs	chr18	-	176	1	Intergenic	novelGene_8812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAGGTGGTTAATGA	2775	False	NA	NA	False	NA	NA	NA	10592166	10591990	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_10592000_10592200
m54284U_201217_021426/16122429/ccs	chr9	-	182	1	Intergenic	novelGene_4952	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCTCACGAAGAAAGGGAA	NA	False	NA	NA	False	NA	NA	NA	75543836	75543654	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_75543700_75543800
m54284U_201217_021426/16123972/ccs	chr2	+	1750	1	Intergenic	novelGene_622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1620	False	NA	NA	False	NA	NA	NA	22876466	22878216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_22876500_22878200
m54284U_201217_021426/161546260/ccs	chr4	-	1700	1	FSM	ENSMUSG00000065353.3	ENSMUST00000083419.3	205	1	-1107	-388	-1107	388	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGATTTAATGTG	NA	False	NA	-10	True	ATTAAA	-14	NA	132080944	132079244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_132079200_132080900
m54284U_201217_021426/161546921/ccs	chr5	-	3171	16	NNC	ENSMUSG00000005103.13	novel	3089	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	382.066602687135	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGATCACTGGCTCTAT	NA	False	NA	-7	True	ATTAAA	-16	NA	38719149	38684155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_38685256_38686867_38687013_38687114_38687193_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718854
m54284U_201217_021426/161611854/ccs	chr19	-	195	1	Intergenic	novelGene_9286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTTTGTATTAAGAT	6711	False	NA	NA	False	NA	NA	NA	45051609	45051414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45051400_45051600
m54284U_201217_021426/161679888/ccs	chr12	-	175	1	Intergenic	novelGene_6885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATCTTAAATAAATA	NA	False	NA	-7	True	NA	NA	NA	108444840	108444665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_108444700_108444800
m54284U_201217_021426/161743159/ccs	chr6	-	177	1	Intergenic	novelGene_3212	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAACAAAACAAAAC	9537	False	NA	NA	False	NA	NA	NA	38524117	38523940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38523900_38524100
m54284U_201217_021426/161810414/ccs	chr2	-	176	1	Intergenic	novelGene_759	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAATTAAAACAAGG	2433	False	NA	NA	False	NA	NA	NA	34730669	34730493	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34730500_34730700
m54284U_201217_021426/161876629/ccs	chr15	+	180	1	Intergenic	novelGene_7784	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTATTCCAGGGCTAG	NA	False	NA	NA	False	NA	NA	NA	76810226	76810406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76810200_76810400
m54284U_201217_021426/16188600/ccs	chr3	-	3564	24	NNC	ENSMUSG00000042520.17	novel	3629	25	NA	NA	398	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_19	296.820281943733	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTATGCTTTTATGTC	8121	False	NA	NA	False	AATAAA	-18	NA	89955208	89913300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942004_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
m54284U_201217_021426/16189899/ccs	chr5	-	181	1	Intergenic	novelGene_3058	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTAAATCTATC	NA	False	NA	NA	False	NA	NA	NA	144661381	144661200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_144661200_144661400
m54284U_201217_021426/161941293/ccs	chr11	-	170	1	Intergenic	novelGene_6436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATTGGATTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	113656619	113656449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_113656400_113656600
m54284U_201217_021426/162006108/ccs	chr19	-	174	1	Intergenic	novelGene_9171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGATTTAAG	NA	False	NA	NA	False	NA	NA	NA	19115141	19114967	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_19115000_19115100
m54284U_201217_021426/162006252/ccs	chr19	-	242	1	Intergenic	novelGene_9087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAACGAAAATGGGTTC	NA	False	NA	NA	False	NA	NA	NA	4528770	4528528	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4528500_4528800
m54284U_201217_021426/162137826/ccs	chr1	-	1689	15	NNC	ENSMUSG00000026209.16	novel	2488	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_14	245.655526612169	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCTGTGCTTTTTCTGA	NA	False	NA	-1	True	ATTAAA	-17	NA	75294091	75285208	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293508_75293978
m54284U_201217_021426/162202288/ccs	chr4	+	176	1	Intergenic	novelGene_1756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAGATAGACAAA	NA	False	NA	NA	False	NA	NA	NA	14827327	14827503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_14827300_14827500
m54284U_201217_021426/162202967/ccs	chr5	+	1730	1	Intergenic	novelGene_2683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-41	NA	96231514	96233244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_96231500_96233200
m54284U_201217_021426/162268005/ccs	chr7	+	212	1	Intergenic	novelGene_3838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGCTGGGATTTCCTG	NA	False	NA	NA	False	AAGAAA	-20	NA	45096332	45096544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_45096300_45096500
m54284U_201217_021426/162333954/ccs	chr10	+	174	1	Intergenic	novelGene_5445	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATACATTTGTG	NA	False	NA	NA	False	NA	NA	NA	80039153	80039327	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_80039200_80039300
m54284U_201217_021426/162334620/ccs	chr3	+	171	1	Intergenic	novelGene_1572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTTTACTGCCAGCAC	NA	False	NA	NA	False	NA	NA	NA	95765808	95765979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_95765800_95766000
m54284U_201217_021426/162399826/ccs	chr5	+	191	1	Intergenic	novelGene_2621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCTTCAAAAGTATATAA	NA	False	NA	NA	False	NA	NA	NA	74240380	74240571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_74240400_74240600
m54284U_201217_021426/16254158/ccs	chrX	+	157	1	Intergenic	novelGene_9717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	161491683	161491840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_161491700_161491800
m54284U_201217_021426/162663200/ccs	chr11	+	180	1	Intergenic	novelGene_6052	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGGAATGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	77629088	77629268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77629100_77629300
m54284U_201217_021426/162728282/ccs	chr17	-	3954	1	NIC	ENSMUSG00000023912.11	novel	2895	9	NA	NA	21288	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCAGCTTCCTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	43956735	43952781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_43952800_43956700
m54284U_201217_021426/162858649/ccs	chr10	-	187	1	Intergenic	novelGene_5547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACAAGGTTTATAGCAT	NA	False	NA	NA	False	NA	NA	NA	116402565	116402378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_116402400_116402600
m54284U_201217_021426/162990515/ccs	chr17	+	181	1	Intergenic	novelGene_8491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTTGATCATGATATT	NA	False	NA	NA	False	NA	NA	NA	29601974	29602155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29602000_29602200
m54284U_201217_021426/163055235/ccs	chr11	+	168	1	Intergenic	novelGene_5812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAATTATTTTCAGA	1409	False	NA	NA	False	NA	NA	NA	51757351	51757519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_51757400_51757500
m54284U_201217_021426/163055326/ccs	chr8	-	178	1	Antisense	novelGene_ENSMUSG00000008450.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAACCTCTG	NA	False	NA	NA	False	NA	NA	NA	106597056	106596878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_106596900_106597100
m54284U_201217_021426/163055575/ccs	chr10	-	166	1	Intergenic	novelGene_5295	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGAGAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	50462466	50462300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_50462300_50462500
m54284U_201217_021426/163121143/ccs	chr3	-	193	1	Intergenic	novelGene_1564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGTGCAACCATTGCC	8523	False	NA	NA	False	NA	NA	NA	95028194	95028001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_95028000_95028200
m54284U_201217_021426/16318666/ccs	chr3	+	187	1	Intergenic	novelGene_1671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGATTGGACTTTCCTA	NA	False	NA	NA	False	NA	NA	NA	126664059	126664246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_126664100_126664200
m54284U_201217_021426/16318834/ccs	chr6	+	178	1	Intergenic	novelGene_3162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGCCCAAATTATACCTG	7237	False	NA	NA	False	NA	NA	NA	33657367	33657545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_33657400_33657500
m54284U_201217_021426/16320616/ccs	chr7	-	2146	1	Antisense	novelGene_ENSMUSG00000036931.16_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTATTATTGTGGCTAG	NA	False	NA	NA	False	NA	NA	NA	30126196	30124050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_30124000_30126200
m54284U_201217_021426/16320799/ccs	chr2	-	174	1	Intergenic	novelGene_729	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAGAATAAAAACT	NA	False	NA	NA	False	NA	NA	NA	32886485	32886311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_32886300_32886500
m54284U_201217_021426/163381333/ccs	chr3	-	176	1	Intergenic	novelGene_1348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCTGAGCAATGA	NA	False	NA	-3	True	NA	NA	NA	10366814	10366638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_10366600_10366800
m54284U_201217_021426/163381975/ccs	chr11	+	157	1	Intergenic	novelGene_5709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	19852174	19852331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_19852200_19852300
m54284U_201217_021426/163383175/ccs	chr3	-	198	1	Intergenic	novelGene_1601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTCAAAAATTTACTGA	NA	False	NA	NA	False	NA	NA	NA	102953790	102953592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_102953600_102953800
m54284U_201217_021426/163446916/ccs	chr10	-	223	1	Intergenic	novelGene_5640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACACAAAATGAAAACAA	9857	False	NA	NA	False	NA	NA	NA	128734416	128734193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128734200_128734400
m54284U_201217_021426/163447318/ccs	chr17	-	183	1	Intergenic	novelGene_8459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATGATAAGGGA	NA	False	NA	NA	False	NA	NA	NA	28523127	28522944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_28522900_28523100
m54284U_201217_021426/163643549/ccs	chr4	+	175	1	Intergenic	novelGene_2383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAGTAACTTCCTAA	4715	False	NA	NA	False	NA	NA	NA	149328702	149328877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149328700_149328900
m54284U_201217_021426/163643620/ccs	chr9	-	178	1	Intergenic	novelGene_5029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTATATGAAGCCAATA	1063	False	NA	NA	False	NA	NA	NA	99157389	99157211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_99157200_99157400
m54284U_201217_021426/163643975/ccs	chr7	+	204	1	Intergenic	novelGene_4135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTATGGTTCTAACTG	NA	False	NA	NA	False	NA	NA	NA	133371601	133371805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_133371600_133371800
m54284U_201217_021426/163710179/ccs	chr2	-	158	1	Intergenic	novelGene_1090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAGTAAATCTTTA	937	False	NA	NA	False	NA	NA	NA	140169611	140169453	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_140169500_140169600
m54284U_201217_021426/163710502/ccs	chr19	-	207	1	Intergenic	novelGene_9102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATCTCAAAGTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	5672789	5672582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5672600_5672800
m54284U_201217_021426/163711308/ccs	chr2	-	160	1	Intergenic	novelGene_843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATATTTTAA	NA	False	NA	NA	False	NA	NA	NA	70484801	70484641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_70484600_70484800
m54284U_201217_021426/163774652/ccs	chr11	+	154	1	Intergenic	novelGene_6341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	101511887	101512041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101511900_101512000
m54284U_201217_021426/163840456/ccs	chr5	-	177	1	Intergenic	novelGene_2912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAAATAAAGA	9028	False	NA	NA	False	NA	NA	NA	124853465	124853288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124853300_124853500
m54284U_201217_021426/163841135/ccs	chr11	+	180	1	Intergenic	novelGene_5976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTTTATTGCATGTG	NA	False	NA	NA	False	NA	NA	NA	72512631	72512811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_72512600_72512800
m54284U_201217_021426/163842081/ccs	chr7	-	167	1	Intergenic	novelGene_3761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTCTGACTAAGATGCT	NA	False	NA	NA	False	NA	NA	NA	29620524	29620357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29620400_29620500
m54284U_201217_021426/16385087/ccs	chr8	+	184	1	Intergenic	novelGene_4508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACTGGGGGGCTGGAAA	NA	False	NA	NA	False	NA	NA	NA	112050938	112051122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112050900_112051100
m54284U_201217_021426/16385927/ccs	chr9	-	208	1	Intergenic	novelGene_4925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCACAAAACAAAACCCTAC	NA	False	NA	NA	False	NA	NA	NA	72336902	72336694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72336700_72336900
m54284U_201217_021426/163906440/ccs	chr15	+	183	1	Intergenic	novelGene_7666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGAGGGCACTGCCTGTT	1719	False	NA	NA	False	NA	NA	NA	31226895	31227078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_31226900_31227100
m54284U_201217_021426/164103762/ccs	chr4	-	202	1	Intergenic	novelGene_2213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	229	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAGGCTGTTGTAGGCGC	NA	False	NA	NA	False	AAAACA	-5	NA	133033631	133033429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_133033400_133033600
m54284U_201217_021426/164299007/ccs	chr4	-	176	1	Intergenic	novelGene_2269	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTTTGTAAGTTG	NA	False	NA	NA	False	NA	NA	NA	137123390	137123214	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_137123200_137123400
m54284U_201217_021426/164301058/ccs	chr5	-	3869	1	NIC	ENSMUSG00000029433.17	novel	3386	7	NA	NA	4978	-203	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGAGTGAGTCTTCAGGC	7838	False	NA	-13	True	ATTAAA	-16	NA	123653839	123649970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_123650000_123653800
m54284U_201217_021426/164429939/ccs	chr19	+	172	1	Intergenic	novelGene_9134	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACTTTAGAGATTACAT	NA	False	NA	7	True	NA	NA	NA	7147521	7147693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_7147500_7147700
m54284U_201217_021426/164430304/ccs	chr6	-	191	1	Intergenic	novelGene_3230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCAGTAACTGAGCACAA	NA	False	NA	NA	False	NA	NA	NA	39570973	39570782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39570800_39571000
m54284U_201217_021426/164431340/ccs	chr2	-	187	1	Intergenic	novelGene_742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	34079408	34079221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34079200_34079400
m54284U_201217_021426/164496303/ccs	chr7	-	157	1	Intergenic	novelGene_4070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	122614907	122614750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_122614800_122614900
m54284U_201217_021426/164497641/ccs	chr19	-	193	1	Intergenic	novelGene_9168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGGGAAAAAAACACAGTCAA	NA	False	NA	NA	False	NA	NA	NA	14667367	14667174	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_14667200_14667400
m54284U_201217_021426/16452353/ccs	chr5	+	201	1	Intergenic	novelGene_2787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTTTGCTTTTAACT	6455	False	NA	NA	False	AAGAAA	-3	NA	114457316	114457517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_114457300_114457500
m54284U_201217_021426/164627822/ccs	chr19	+	5314	1	Genic_Genomic	ENSMUSG00000036450.5	novel	NA	NA	NA	NA	12121	4010	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGTCGAAGTCTCATT	549	False	NA	NA	False	NA	NA	NA	44563409	44568723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_+_44563400_44568700
m54284U_201217_021426/164757650/ccs	chr6	-	1047	1	NIC	ENSMUSG00000079523.9	novel	570	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	False	NA	-17	True	AATAAA	-14	NA	72935382	72934335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_72934300_72935400
m54284U_201217_021426/164758612/ccs	chr19	+	177	1	Intergenic	novelGene_9223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATCTTTATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	32850910	32851087	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_32850900_32851100
m54284U_201217_021426/164758793/ccs	chr6	-	813	1	FSM	ENSMUSG00000086922.3	ENSMUST00000118459.2	685	1	0	-128	0	128	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGCAATTAATTGTTG	7118	False	NA	NA	False	ATTAAA	-34	NA	31119598	31118785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_-_31118800_31119600
m54284U_201217_021426/164824779/ccs	chr16	-	183	1	Intergenic	novelGene_8311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGATTTCTATT	NA	False	NA	NA	False	NA	NA	NA	89912625	89912442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_89912400_89912600
m54284U_201217_021426/164891020/ccs	chr10	+	184	1	Intergenic	novelGene_5364	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGTAGGAATCGGCCGC	NA	False	NA	NA	False	NA	NA	NA	63213232	63213416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_63213200_63213400
m54284U_201217_021426/165019898/ccs	chr13	-	172	1	Intergenic	novelGene_7026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGTTAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	38853782	38853610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_38853600_38853800
m54284U_201217_021426/165086367/ccs	chr8	-	220	1	Intergenic	novelGene_4355	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATTACCTCAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	79601089	79600869	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_79600900_79601100
m54284U_201217_021426/165152495/ccs	chr8	-	157	1	Intergenic	novelGene_4458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	107281326	107281169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107281200_107281300
m54284U_201217_021426/165218530/ccs	chr7	-	177	1	Intergenic	novelGene_3858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAAAAAATCCCTAT	NA	False	NA	NA	False	NA	NA	NA	48571291	48571114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_48571100_48571300
m54284U_201217_021426/165349452/ccs	chr3	-	198	1	Intergenic	novelGene_1500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGTTTAGCTGGGTGTG	NA	False	NA	NA	False	NA	NA	NA	88709195	88708997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88709000_88709200
m54284U_201217_021426/165413506/ccs	chr3	-	158	1	Intergenic	novelGene_1712	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	144319226	144319068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_144319100_144319200
m54284U_201217_021426/165480138/ccs	chr4	-	162	1	Intergenic	novelGene_2280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTCAGGAAGAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	138214362	138214200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_138214200_138214400
m54284U_201217_021426/165480334/ccs	chr13	-	175	1	Intergenic	novelGene_7301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTCTGTTGTCTTTAC	NA	False	NA	NA	False	NA	NA	NA	111647111	111646936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_111646900_111647100
m54284U_201217_021426/165546633/ccs	chr4	-	173	1	Intergenic	novelGene_2231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	1783	False	NA	NA	False	NA	NA	NA	133966833	133966660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_133966700_133966800
m54284U_201217_021426/165742776/ccs	chr7	-	191	1	Intergenic	novelGene_3847	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAGAAAAAAATAACT	9597	False	NA	NA	False	NA	NA	NA	45194889	45194698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_45194700_45194900
m54284U_201217_021426/165743430/ccs	chr3	+	172	1	Intergenic	novelGene_1713	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGGAACTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	145337173	145337345	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_145337200_145337300
m54284U_201217_021426/16580644/ccs	chrX	-	186	1	Intergenic	novelGene_9651	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCTCTCCTCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	142271171	142270985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_142271000_142271200
m54284U_201217_021426/16581298/ccs	chr11	-	175	1	Intergenic	novelGene_6178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	345	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGGAAGCAAGAGA	NA	False	NA	-1	True	NA	NA	NA	87374930	87374755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87374800_87374900
m54284U_201217_021426/165871747/ccs	chr7	-	176	1	Intergenic	novelGene_3634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATATTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	4887780	4887604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_4887600_4887800
m54284U_201217_021426/165873900/ccs	chr5	+	172	1	Intergenic	novelGene_2479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAATACTCTTGGC	NA	False	NA	NA	False	NA	NA	NA	22819761	22819933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_22819800_22819900
m54284U_201217_021426/165874387/ccs	chr4	-	1092	1	Antisense	novelGene_ENSMUSG00000035683.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAACAAAACAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	44309119	44308027	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_44308000_44309100
m54284U_201217_021426/166002712/ccs	chr18	-	176	1	Intergenic	novelGene_8965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGAGCAAGCAGGAGCGA	NA	False	NA	NA	False	NA	NA	NA	56797395	56797219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_56797200_56797400
m54284U_201217_021426/166002961/ccs	chr2	+	204	1	Intergenic	novelGene_709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAATAATAAAGAAAGCAG	NA	False	NA	NA	False	NA	NA	NA	31916070	31916274	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_31916100_31916300
m54284U_201217_021426/166003156/ccs	chr4	+	116	1	Intergenic	novelGene_2317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTTTTGTTTTTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	142821717	142821833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_142821700_142821800
m54284U_201217_021426/166070628/ccs	chr8	-	176	1	Intergenic	novelGene_4371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTTAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	85090190	85090014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_85090000_85090200
m54284U_201217_021426/166199520/ccs	chr11	-	189	1	Intergenic	novelGene_6396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTTAGGAAAATATATC	9029	False	NA	NA	False	NA	NA	NA	106742083	106741894	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106741900_106742100
m54284U_201217_021426/166201160/ccs	chr17	-	168	1	Intergenic	novelGene_8345	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCTCCACAGCATCTCA	NA	False	NA	NA	False	NA	NA	NA	5266267	5266099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_5266100_5266300
m54284U_201217_021426/166265000/ccs	chr7	+	194	1	Intergenic	novelGene_3926	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAACAAAACAGATAGA	5566	False	NA	NA	False	NA	NA	NA	80836394	80836588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_80836400_80836600
m54284U_201217_021426/166266555/ccs	chr6	-	2295	1	Antisense	novelGene_ENSMUSG00000030030.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTACTTTTGTTTAT	3806	False	NA	NA	False	NA	NA	NA	83139455	83137160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr6_-_83137200_83139500
m54284U_201217_021426/166267154/ccs	chr14	-	174	1	Intergenic	novelGene_7549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAGAAGTTAAAT	NA	False	NA	NA	False	NA	NA	NA	76711931	76711757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_76711800_76711900
m54284U_201217_021426/166332278/ccs	chr7	-	194	1	Intergenic	novelGene_4039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCCTTTTGCAGTCCCC	NA	False	NA	NA	False	NA	NA	NA	115900301	115900107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_115900100_115900300
m54284U_201217_021426/166462592/ccs	chr6	-	175	1	Intergenic	novelGene_3458	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAATGT	9490	False	NA	NA	False	NA	NA	NA	120354869	120354694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_120354700_120354900
m54284U_201217_021426/166462788/ccschrUn	chrUn_MU069435v1	-	184	1	Intergenic	novelGene_9744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCATGCATGCATGCA	NA	False	NA	NA	False	NA	NA	NA	4670	4486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_MU069435v1_-_4500_4700
m54284U_201217_021426/16646534/ccs	chr1	-	189	1	Intergenic	novelGene_127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACTAATAGGATGGACCA	348	False	NA	NA	False	NA	NA	NA	55215204	55215015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_55215000_55215200
m54284U_201217_021426/166723797/ccs	chr12	-	168	1	Intergenic	novelGene_6615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAACGCTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	31800643	31800475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_31800500_31800600
m54284U_201217_021426/166724517/ccs	chr15	-	161	1	Intergenic	novelGene_7801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	2445	False	NA	NA	False	NA	NA	NA	78393461	78393300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_78393300_78393500
m54284U_201217_021426/166726483/ccs	chr19	+	192	1	Intergenic	novelGene_9350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGACATAGGAATTGGG	NA	False	NA	NA	False	NA	NA	NA	57451849	57452041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_57451800_57452000
m54284U_201217_021426/166790984/ccs	chr7	+	193	1	Intergenic	novelGene_3621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCTCATGAGGGACTGC	3281	False	NA	NA	False	NA	NA	NA	3574245	3574438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3574200_3574400
m54284U_201217_021426/166854966/ccs	chr17	+	188	1	Intergenic	novelGene_8674	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCCATAACTTTTATTAA	NA	False	NA	NA	False	NA	NA	NA	65837416	65837604	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_65837400_65837600
m54284U_201217_021426/166920219/ccs	chr10	+	220	1	Intergenic	novelGene_5617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCATCTGCATTGACCTG	NA	False	NA	NA	False	NA	NA	NA	128004849	128005069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128004800_128005100
m54284U_201217_021426/166921985/ccs	chr18	-	196	1	Intergenic	novelGene_8822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAGAGGAAACAAACAAC	NA	False	NA	NA	False	NA	NA	NA	16122722	16122526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_16122500_16122700
m54284U_201217_021426/166922447/ccs	chr10	-	194	1	Intergenic	novelGene_5399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCTGCCAGACCTCCACC	NA	False	NA	NA	False	NA	NA	NA	73091385	73091191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_73091200_73091400
m54284U_201217_021426/166986940/ccs	chr1	-	196	1	Intergenic	novelGene_231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGCACTGGCCTGGCGTG	NA	False	NA	NA	False	NA	NA	NA	86467658	86467462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_86467500_86467700
m54284U_201217_021426/167118648/ccs	chr4	+	200	1	Intergenic	novelGene_1907	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTATTCAACAAATATAAC	NA	False	NA	NA	False	NA	NA	NA	75064792	75064992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_75064800_75065000
m54284U_201217_021426/167119086/ccs	chr2	-	179	1	Intergenic	novelGene_657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAACAGATCCATG	NA	False	NA	NA	False	NA	NA	NA	28514202	28514023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_28514000_28514200
m54284U_201217_021426/16713586/ccs	chr9	-	181	1	Intergenic	novelGene_4975	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTTAATTAAAATTCT	NA	False	NA	NA	False	NA	NA	NA	79060986	79060805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_79060800_79061000
m54284U_201217_021426/167184796/ccs	chr18	-	230	1	Intergenic	novelGene_8912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGGTACCTCTTCACCT	NA	False	NA	NA	False	AATAAA	-10	NA	36466742	36466512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_36466500_36466700
m54284U_201217_021426/167248605/ccs	chr19	-	216	1	Intergenic	novelGene_9303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCCTCTGTTATAGAG	NA	False	NA	NA	False	NA	NA	NA	45841267	45841051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45841100_45841300
m54284U_201217_021426/167445871/ccs	chr6	+	171	1	Intergenic	novelGene_3373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATAATCAGCTATTT	NA	False	NA	NA	False	NA	NA	NA	86808484	86808655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_86808500_86808700
m54284U_201217_021426/167510548/ccs	chr4	+	174	1	Intergenic	novelGene_1990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAAGAAGGAGGAAGAG	NA	False	NA	NA	False	NA	NA	NA	108160250	108160424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_108160200_108160400
m54284U_201217_021426/167510569/ccs	chr16	-	188	1	Intergenic	novelGene_8086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGAAAGTTCAGGTGGGC	NA	False	NA	NA	False	NA	NA	NA	15393336	15393148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_15393100_15393300
m54284U_201217_021426/167510724/ccs	chr7	+	181	1	Intergenic	novelGene_4034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATCTTTTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	113732546	113732727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_113732500_113732700
m54284U_201217_021426/167512385/ccs	chr11	-	224	1	Intergenic	novelGene_5708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGGCAAGTGACAAACA	9844	False	NA	NA	False	AGTAAA	-15	NA	17944035	17943811	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_17943800_17944000
m54284U_201217_021426/167576049/ccs	chr10	-	186	1	Intergenic	novelGene_5614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAACAAACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127935686	127935500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127935500_127935700
m54284U_201217_021426/167577081/ccs	chr14	-	151	1	Intergenic	novelGene_7507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATAAATAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	63013736	63013585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_63013600_63013700
m54284U_201217_021426/167641329/ccs	chr16	-	2171	1	NIC	ENSMUSG00000022680.15	novel	4228	24	NA	NA	0	-13731	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGGGCTCTTATTTTTAT	9770	False	NA	NA	False	NA	NA	NA	13720919	13718748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_13718700_13720900
m54284U_201217_021426/167641914/ccs	chr8	+	98	1	Intergenic	novelGene_4549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTTCTCCCCGGGCGG	NA	False	NA	47	True	NA	NA	NA	120610455	120610553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_120610500_120610600
m54284U_201217_021426/167643998/ccs	chr12	-	178	1	Intergenic	novelGene_6734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATTTTAAAAAAATGCAG	NA	False	NA	NA	False	NA	NA	NA	76672250	76672072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_76672100_76672200
m54284U_201217_021426/167707281/ccs	chr16	+	6190	1	FSM	ENSMUSG00000087935.3	ENSMUST00000157310.3	178	1	-2998	-3014	-2998	3014	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGGTGGTCTGGCCATTT	6053	False	NA	NA	False	AATAAA	-18	NA	22926507	22932697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_+_22926500_22932700
m54284U_201217_021426/167707719/ccs	chr13	+	186	1	Intergenic	novelGene_7063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGCTATCTCTGAGCTC	NA	False	NA	NA	False	NA	NA	NA	49925235	49925421	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_49925200_49925400
m54284U_201217_021426/167707858/ccs	chr12	-	200	1	Intergenic	novelGene_6830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTCTAAAACTTAATAGA	NA	False	NA	NA	False	AATAAA	-4	NA	87785282	87785082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_87785100_87785300
m54284U_201217_021426/167708683/ccs	chr11	-	209	1	Intergenic	novelGene_6025	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGGAAGAAACTGTGAGT	NA	False	NA	NA	False	NA	NA	NA	76001927	76001718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_76001700_76001900
m54284U_201217_021426/167772426/ccs	chr11	-	188	1	Intergenic	novelGene_6061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTGGTGTTACTTCTTT	NA	False	NA	NA	False	NA	NA	NA	77984606	77984418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_77984400_77984600
m54284U_201217_021426/167773186/ccs	chr5	+	218	1	Intergenic	novelGene_2583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTATGGTTTCAGAGGT	424	False	NA	NA	False	NA	NA	NA	64576600	64576818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_64576600_64576800
m54284U_201217_021426/167774130/ccs	chr2	+	166	1	Intergenic	novelGene_1216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTGAGACAGGGTT	NA	False	NA	NA	False	NA	NA	NA	164674047	164674213	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_164674000_164674200
m54284U_201217_021426/167838754/ccs	chr10	-	193	1	Intergenic	novelGene_5518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATTGCAAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	95568875	95568682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_95568700_95568900
m54284U_201217_021426/167839770/ccs	chrX	-	418	1	FSM	ENSMUSG00000060685.5	ENSMUST00000075792.5	850	1	432	0	432	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGTTTAAATTCTTAAC	NA	False	NA	NA	False	AATAAA	-39	NA	8842366	8841948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_8841900_8842400
m54284U_201217_021426/168036344/ccs	chr5	-	192	1	Intergenic	novelGene_2882	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCTGTCCTATAAGAT	NA	False	NA	NA	False	NA	NA	NA	123538849	123538657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123538700_123538800
m54284U_201217_021426/168101805/ccs	chr13	-	186	1	Intergenic	novelGene_6955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTATAAGGATAAGAAGAC	NA	False	NA	NA	False	NA	NA	NA	9051260	9051074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_9051100_9051300
m54284U_201217_021426/168165873/ccs	chr19	+	171	1	NIC	ENSMUSG00000050815.7	novel	2131	4	NA	NA	-521	-1438	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTTAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	12399107	12399278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_12399100_12399300
m54284U_201217_021426/168231019/ccs	chr19	-	174	1	Intergenic	novelGene_9108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTTTGTGTGTATGAG	8341	False	NA	NA	False	NA	NA	NA	5841668	5841494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5841500_5841700
m54284U_201217_021426/168231548/ccs	chr11	+	197	1	Intergenic	novelGene_6356	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGGAACAAAACACCC	NA	False	NA	NA	False	NA	NA	NA	103011818	103012015	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_103011800_103012000
m54284U_201217_021426/168231863/ccs	chr11	-	528	1	FSM	ENSMUSG00000081604.6	ENSMUST00000118048.2	411	1	-43	-74	-43	74	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAATAAAAGTTAATAAAT	NA	False	NA	NA	False	NA	NA	NA	93928497	93927969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_93928000_93928500
m54284U_201217_021426/168233251/ccs	chr11	-	170	1	Intergenic	novelGene_6239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAAAAAAGCC	276	False	NA	NA	False	NA	NA	NA	95842192	95842022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95842000_95842200
m54284U_201217_021426/168233530/ccs	chrX	-	187	1	Intergenic	novelGene_9638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACACTGAGAGATCAAT	NA	False	NA	NA	False	NA	NA	NA	135127378	135127191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_135127200_135127400
m54284U_201217_021426/168297809/ccs	chr15	-	159	1	Intergenic	novelGene_7959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	99003862	99003703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99003700_99003900
m54284U_201217_021426/168428628/ccs	chr5	-	191	1	Intergenic	novelGene_2638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGAAACCGCTTACTAA	NA	False	NA	NA	False	NA	NA	NA	77471247	77471056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77471100_77471200
m54284U_201217_021426/16842882/ccs	chr17	-	150	1	Intergenic	novelGene_8478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATATAAAAAGAATCC	7450	False	NA	NA	False	NA	NA	NA	29230779	29230629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29230600_29230800
m54284U_201217_021426/168430377/ccs	chr9	-	191	1	Intergenic	novelGene_5105	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAACAATAAATGTGCTC	NA	False	NA	NA	False	NA	NA	NA	110016326	110016135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_110016100_110016300
m54284U_201217_021426/16845393/ccs	chr4	+	198	1	Intergenic	novelGene_2385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGACACACACATATACT	NA	False	NA	NA	False	NA	NA	NA	149401221	149401419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_149401200_149401400
m54284U_201217_021426/168494067/ccs	chr13	-	157	1	Intergenic	novelGene_7170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	64724780	64724623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64724600_64724800
m54284U_201217_021426/168559274/ccs	chr2	-	195	1	Intergenic	novelGene_1328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGATAGATGTAGCCGG	7291	False	NA	NA	False	NA	NA	NA	181205836	181205641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_181205600_181205800
m54284U_201217_021426/168561258/ccs	chr4	-	175	1	Intergenic	novelGene_2228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAACTAAATAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	133734198	133734023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_133734000_133734200
m54284U_201217_021426/168624956/ccs	chr12	-	193	1	Intergenic	novelGene_6840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACATCACTCTTAATATC	NA	False	NA	NA	False	NA	NA	NA	99143768	99143575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_99143600_99143800
m54284U_201217_021426/168888853/ccs	chr17	-	168	1	Intergenic	novelGene_8468	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAAACCTTTTTATTG	NA	False	NA	NA	False	NA	NA	NA	28923410	28923242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_28923200_28923400
m54284U_201217_021426/168889101/ccs	chr5	-	5236	1	Intergenic	novelGene_2652	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATCAGAGTAACTGTCT	NA	False	NA	NA	False	NA	NA	NA	89356997	89351761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_89351800_89357000
m54284U_201217_021426/168953813/ccs	chr16	-	171	1	Intergenic	novelGene_8251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTCCCCGTAACATAGT	NA	False	NA	NA	False	NA	NA	NA	37916037	37915866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_37915900_37916000
m54284U_201217_021426/169018503/ccs	chr11	+	2062	10	NIC	ENSMUSG00000006575.15	novel	2046	11	NA	NA	82	0	intron_retention	FALSE	canonical	3	171	junction_6	30.4233503564874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTCATCTGTTGGAGA	7491	False	NA	14	True	AATAAA	-16	NA	102284310	102293381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
m54284U_201217_021426/16908440/ccs	chr2	+	171	1	Intergenic	novelGene_1278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTCAATACTGGG	8709	False	NA	NA	False	NA	NA	NA	169923832	169924003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_169923800_169924000
m54284U_201217_021426/169085037/ccs	chr3	-	3501	1	FSM	ENSMUSG00000062006.13	ENSMUST00000199001.2	573	1	-2928	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTTCCGTTATCTGTGAT	NA	False	NA	-14	True	AATAAA	-17	NA	130523983	130520482	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_130520500_130524000
m54284U_201217_021426/16911105/ccs	chr12	-	182	1	Intergenic	novelGene_6676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTTATAGTTAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	69184544	69184362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_69184400_69184500
m54284U_201217_021426/169150488/ccs	chr6	+	178	1	Intergenic	novelGene_3578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAGATGCTCCAACC	NA	False	NA	NA	False	NA	NA	NA	146984520	146984698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_146984500_146984700
m54284U_201217_021426/169214008/ccs	chr19	-	175	1	Intergenic	novelGene_9101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGTGTGGTAGTGCACA	NA	False	NA	NA	False	NA	NA	NA	5640702	5640527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5640500_5640700
m54284U_201217_021426/169216160/ccs	chr14	-	129	1	Intergenic	novelGene_7380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAACAAACAAAAA	NA	False	NA	NA	False	NA	NA	NA	30254466	30254337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_30254300_30254500
m54284U_201217_021426/169279915/ccs	chr16	-	188	1	Intergenic	novelGene_8044	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATTTATTTTATGTA	NA	False	NA	NA	False	NA	NA	NA	8590541	8590353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_8590400_8590500
m54284U_201217_021426/169280939/ccs	chr11	+	174	1	Intergenic	novelGene_6205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGGAGGTGGAGAG	NA	False	NA	NA	False	NA	NA	NA	90579750	90579924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_90579800_90579900
m54284U_201217_021426/169282310/ccs	chr7	-	181	1	Intergenic	novelGene_3764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTT	NA	False	NA	-2	True	NA	NA	NA	29661387	29661206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29661200_29661400
m54284U_201217_021426/169345293/ccs	chr4	+	204	1	Intergenic	novelGene_1991	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGGAAAGGGTGAAATT	NA	False	NA	NA	False	NA	NA	NA	108163375	108163579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_108163400_108163600
m54284U_201217_021426/169346004/ccs	chr3	-	203	1	Intergenic	novelGene_1604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGGTGAGATGGCTCAG	NA	False	NA	NA	False	NA	NA	NA	103113827	103113624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_103113600_103113800
m54284U_201217_021426/169346366/ccs	chr2	-	949	1	NIC	ENSMUSG00000017929.14	novel	4210	9	NA	NA	0	-40625	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAAATATTCGCTGT	NA	False	NA	NA	False	NA	NA	NA	167191103	167190154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_167190200_167191100
m54284U_201217_021426/169347564/ccs	chr11	-	199	1	Intergenic	novelGene_6441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTAAGAGTAGAAAATG	NA	False	NA	NA	False	NA	NA	NA	114597016	114596817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_114596800_114597000
m54284U_201217_021426/169411140/ccs	chr4	-	2954	9	NIC	ENSMUSG00000063800.6	novel	1516	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	462	junction_7	41.8193660281932	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGCTTTTTGTTTCTT	NA	False	NA	-8	True	ATTAAA	-20	NA	108436533	108422066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108434286_108436181
m54284U_201217_021426/169476156/ccs	chr14	-	2133	8	NIC	ENSMUSG00000021953.15	novel	1881	9	NA	NA	-117	-111	intron_retention	FALSE	canonical	3	2964	junction_2	197.154347491233	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGAGACTTATTCTCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	63746322	63729906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_63730296_63731190_63731461_63731805_63731897_63733168_63733342_63733438_63733589_63734393_63735090_63737569_63737770_63746158
m54284U_201217_021426/169674535/ccs	chr6	+	182	1	Intergenic	novelGene_3257	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACAAAAGAAACTGGTC	NA	False	NA	NA	False	NA	NA	NA	48336531	48336713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_48336500_48336700
m54284U_201217_021426/16975606/ccs	chr14	-	176	1	Intergenic	novelGene_7342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAATGCGCCA	NA	False	NA	NA	False	NA	NA	NA	18447082	18446906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_18446900_18447100
m54284U_201217_021426/169803852/ccs	chr14	+	107	1	FSM	ENSMUSG00000119656.1	ENSMUST00000239681.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAGTGGGAGACTTCAA	NA	False	NA	NA	False	NA	NA	NA	40969642	40969749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_40969600_40969700
m54284U_201217_021426/169804328/ccs	chr11	+	182	1	Intergenic	novelGene_6056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	7065	False	NA	NA	False	NA	NA	NA	77818285	77818467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77818300_77818500
m54284U_201217_021426/169804886/ccs	chr3	+	179	1	Intergenic	novelGene_1559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAATATTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	94835738	94835917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_94835700_94835900
m54284U_201217_021426/169805532/ccs	chr13	-	202	1	Intergenic	novelGene_7328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGCTTTCCACAGAGAA	NA	False	NA	NA	False	NA	NA	NA	120501301	120501099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_120501100_120501300
m54284U_201217_021426/169806635/ccs	chr12	+	177	1	Intergenic	novelGene_6782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAGATAACAGCTGT	NA	False	NA	NA	False	NA	NA	NA	83564937	83565114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_83564900_83565100
m54284U_201217_021426/170001047/ccs	chr2	+	204	1	Intergenic	novelGene_752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCATCAGATTCTCTGG	NA	False	NA	NA	False	NA	NA	NA	34634744	34634948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_34634700_34634900
m54284U_201217_021426/170002223/ccs	chr11	+	3604	1	Antisense	novelGene_ENSMUSG00000044502.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCCAAACAAAAGCCCTAA	NA	False	NA	NA	False	NA	NA	NA	31615100	31618704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_31615100_31618700
m54284U_201217_021426/170133100/ccs	chr10	-	190	1	Intergenic	novelGene_5438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGCCGGGGCAATGG	NA	False	NA	NA	False	NA	NA	NA	79493169	79492979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_79493000_79493200
m54284U_201217_021426/170133167/ccs	chr16	-	807	1	Intergenic	novelGene_8162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTACTAACGTTTTTATT	NA	False	NA	NA	False	NA	NA	NA	22084299	22083492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_22083500_22084300
m54284U_201217_021426/170134040/ccs	chr13	+	1137	1	Intergenic	novelGene_7247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCACTAGGACCAAAAGCAA	7931	False	NA	NA	False	NA	NA	NA	96019450	96020587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_96019400_96020600
m54284U_201217_021426/170197419/ccs	chr8	+	249	1	Intergenic	novelGene_4418	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGAAACAATTTGGCT	NA	False	NA	NA	False	NA	NA	NA	96325208	96325457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_96325200_96325500
m54284U_201217_021426/170197812/ccs	chr4	+	3834	10	NIC	ENSMUSG00000028248.16	novel	2438	10	NA	NA	0	0	intron_retention	FALSE	canonical	1	8	junction_9	141.373247333887	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-11	True	NA	13	True	AATAAA	-25	NA	21848047	21875256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21870406_21871437_21871609_21873588
m54284U_201217_021426/170264848/ccs	chr9	-	200	1	Intergenic	novelGene_4697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAGTTACGAGGACTGG	NA	False	NA	NA	False	NA	NA	NA	32010177	32009977	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_32010000_32010200
m54284U_201217_021426/170328363/ccs	chr19	-	160	1	Intergenic	novelGene_9321	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATAAATAAATTTT	2876	False	NA	NA	False	NA	NA	NA	46966691	46966531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_46966500_46966700
m54284U_201217_021426/170328462/ccs	chrX	-	198	1	Intergenic	novelGene_9415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGCTTTTTGGCGAA	NA	False	NA	NA	False	NA	NA	NA	35171152	35170954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_35171000_35171200
m54284U_201217_021426/170329841/ccs	chr3	+	186	1	Intergenic	novelGene_1421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAAATATGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	63684000	63684186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_63684000_63684200
m54284U_201217_021426/170330336/ccs	chr15	+	178	1	Intergenic	novelGene_7984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAACACCAAAACCAAAA	NA	False	NA	NA	False	NA	NA	NA	100094448	100094626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_100094400_100094600
m54284U_201217_021426/17042135/ccs	chr17	-	211	1	Intergenic	novelGene_8434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCGTGAACTCCAATTC	NA	False	NA	NA	False	NA	NA	NA	26804821	26804610	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26804600_26804800
m54284U_201217_021426/170460725/ccs	chr2	+	562	1	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	21240	0	12197	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGTCATGGCTTA	NA	False	NA	44	True	ATTAAA	-22	NA	117101459	117102021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_+_117101500_117102000
m54284U_201217_021426/170525375/ccs	chr1	-	177	1	Intergenic	novelGene_109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATACAT	NA	False	NA	NA	False	NA	NA	NA	45708324	45708147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_45708100_45708300
m54284U_201217_021426/170526448/ccs	chr2	-	211	1	Intergenic	novelGene_1070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGTGGTGTTAGTGAGA	3548	False	NA	NA	False	NA	NA	NA	130664187	130663976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_130664000_130664200
m54284U_201217_021426/170526609/ccs	chr16	+	201	1	Intergenic	novelGene_8325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGATGTCACATTTAAG	NA	False	NA	NA	False	NA	NA	NA	91347629	91347830	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_91347600_91347800
m54284U_201217_021426/170591357/ccs	chr9	-	176	1	Intergenic	novelGene_4960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTCTAAAGAAGCAAC	NA	False	NA	NA	False	NA	NA	NA	77960700	77960524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_77960500_77960700
m54284U_201217_021426/170592836/ccs	chr19	+	187	1	Intergenic	novelGene_9328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACTGGAAAGTGATTTCA	NA	False	NA	NA	False	NA	NA	NA	47533146	47533333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_47533100_47533300
m54284U_201217_021426/170592931/ccs	chr13	+	193	1	Intergenic	novelGene_7006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATGATCAGCAAAAATCT	5668	False	NA	NA	False	NA	NA	NA	29751339	29751532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_29751300_29751500
m54284U_201217_021426/170852367/ccs	chr7	-	2738	6	NIC	ENSMUSG00000025103.9	novel	3001	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	68	junction_5	258.291773001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTTGTCACCTCTCTTT	NA	False	NA	-4	True	AATAAA	-18	NA	81479179	81441821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81478720
m54284U_201217_021426/170852500/ccs	chrX	-	174	1	Intergenic	novelGene_9678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAATTGAACCCA	NA	False	NA	NA	False	NA	NA	NA	151154961	151154787	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_151154800_151155000
m54284U_201217_021426/170852826/ccs	chr11	-	238	1	Intergenic	novelGene_5989	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	600	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGACTGTTGGTTAAAA	NA	False	NA	NA	False	AATAAA	-35	NA	74609104	74608866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_74608900_74609100
m54284U_201217_021426/170986126/ccs	chr15	-	179	1	Intergenic	novelGene_7980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGGAAACTT	NA	False	NA	NA	False	NA	NA	NA	99977688	99977509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99977500_99977700
m54284U_201217_021426/171049131/ccs	chr7	-	195	1	Intergenic	novelGene_4080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAAACAAAAGAC	NA	False	NA	NA	False	NA	NA	NA	125915338	125915143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_125915100_125915300
m54284U_201217_021426/171049226/ccs	chrX	+	197	1	Intergenic	novelGene_9452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCTCAGAGGACTACAGC	NA	False	NA	NA	False	NA	NA	NA	47756026	47756223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_47756000_47756200
m54284U_201217_021426/171049671/ccs	chr2	-	160	1	Intergenic	novelGene_566	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4343233	4343073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_4343100_4343200
m54284U_201217_021426/171051433/ccs	chr4	+	199	1	Intergenic	novelGene_2405	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGTATAACGGGCTGTG	NA	False	NA	NA	False	NA	NA	NA	151998268	151998467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_151998300_151998500
m54284U_201217_021426/171116073/ccs	chr11	-	175	1	Intergenic	novelGene_6147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACACTTTTC	NA	False	NA	NA	False	NA	NA	NA	85261619	85261444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_85261400_85261600
m54284U_201217_021426/171180247/ccs	chr5	+	205	1	Intergenic	novelGene_3078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTACCAGTCCTTAT	NA	False	NA	NA	False	NA	NA	NA	147919210	147919415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_147919200_147919400
m54284U_201217_021426/171180790/ccs	chr5	-	220	1	Intergenic	novelGene_2966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACACCTCTTTGAATTGAA	4388	False	NA	NA	False	NA	NA	NA	134665993	134665773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_134665800_134666000
m54284U_201217_021426/171182109/ccs	chr2	-	172	1	Intergenic	novelGene_963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAGTCACATTTAT	NA	False	NA	NA	False	NA	NA	NA	103659077	103658905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_103658900_103659100
m54284U_201217_021426/171248419/ccs	chr15	+	186	1	Intergenic	novelGene_7941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCCCAGGGGGTTCTAA	1340	False	NA	NA	False	NA	NA	NA	98569369	98569555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98569400_98569600
m54284U_201217_021426/171312081/ccs	chr3	+	173	1	Intergenic	novelGene_1484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTTTAAAAACAAAACAAA	NA	False	NA	1	True	NA	NA	NA	88395165	88395338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88395200_88395300
m54284U_201217_021426/171379198/ccs	chr13	+	162	1	Intergenic	novelGene_7215	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATTAATTAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	76640976	76641138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_76641000_76641100
m54284U_201217_021426/171442358/ccs	chr18	+	225	1	Intergenic	novelGene_8959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAATGACCTTATCTTG	NA	False	NA	NA	False	AAAAAG	-21	NA	53586156	53586381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_53586200_53586400
m54284U_201217_021426/171442723/ccs	chr4	-	990	1	FSM	ENSMUSG00000046341.6	ENSMUST00000120560.2	450	1	-89	-451	-89	451	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATTATAAGGGAAGGAT	NA	False	NA	NA	False	AATAAA	-38	NA	69844405	69843415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_69843400_69844400
m54284U_201217_021426/171510609/ccs	chr8	-	229	1	Intergenic	novelGene_4560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	852	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCTGACTGAGACACC	NA	False	NA	NA	False	NA	NA	NA	122261291	122261062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_122261100_122261300
m54284U_201217_021426/171575088/ccs	chr4	-	200	1	Intergenic	novelGene_1862	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTAAAAAAATCATCATT	NA	False	NA	NA	False	NA	NA	NA	49231012	49230812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_49230800_49231000
m54284U_201217_021426/171638802/ccs	chr2	-	189	1	Intergenic	novelGene_1159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTTTAAAGGAGATT	NA	False	NA	NA	False	NA	NA	NA	155210811	155210622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_155210600_155210800
m54284U_201217_021426/171640544/ccs	chr5	-	177	1	Intergenic	novelGene_3083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGTATGGCCTATG	NA	False	NA	NA	False	NA	NA	NA	148777324	148777147	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_148777100_148777300
m54284U_201217_021426/171641095/ccs	chr8	-	167	1	Intergenic	novelGene_4329	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAACCTTAAAG	8560	False	NA	NA	False	NA	NA	NA	71264587	71264420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_71264400_71264600
m54284U_201217_021426/171704548/ccs	chr14	-	179	1	Intergenic	novelGene_7400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGTAGTAATTATAT	NA	False	NA	NA	False	NA	NA	NA	38384836	38384657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_38384700_38384800
m54284U_201217_021426/171704866/ccs	chr10	+	193	1	Intergenic	novelGene_5397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTATTAAAAAATTTTTT	1290	False	NA	NA	False	NA	NA	NA	71182666	71182859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_71182700_71182900
m54284U_201217_021426/171705483/ccs	chr12	-	170	1	Intergenic	novelGene_6831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGAGAGAGAGAA	NA	False	NA	NA	False	NA	NA	NA	88347749	88347579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_88347600_88347700
m54284U_201217_021426/171705855/ccs	chr2	+	2697	14	NNC	ENSMUSG00000017861.12	novel	3651	14	NA	NA	-88	971	at_least_one_novel_splicesite	FALSE	canonical	1	55	junction_8	819.729317425059	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCCCGACTCTGCCC	NA	False	NA	NA	False	AATAAA	-15	NA	162896518	162925590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917579_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
m54284U_201217_021426/171706594/ccs	chr18	-	4429	1	NIC	ENSMUSG00000033319.6	novel	5726	3	NA	NA	0	-19797	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46659038	46654609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_46654600_46659000
m54284U_201217_021426/17171604/ccs	chr14	-	1953	1	NIC	ENSMUSG00000049960.5	novel	2572	3	NA	NA	0	-455	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACAACTGTGTCGTGGA	8527	False	NA	NA	False	NA	NA	NA	20443702	20441749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_20441700_20443700
m54284U_201217_021426/171771487/ccs	chr10	-	175	1	Intergenic	novelGene_5462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGGAGGGAGTTCCA	8993	False	NA	NA	False	NA	NA	NA	81051176	81051001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_81051000_81051200
m54284U_201217_021426/171772228/ccs	chr19	-	178	1	Intergenic	novelGene_9252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAGTGATCTGTGA	NA	False	NA	NA	False	NA	NA	NA	40913726	40913548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_40913500_40913700
m54284U_201217_021426/171836772/ccs	chr16	-	176	1	Intergenic	novelGene_8265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAGTAGATGAAAT	NA	False	NA	NA	False	NA	NA	NA	45637982	45637806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_45637800_45638000
m54284U_201217_021426/171901311/ccs	chr16	-	188	1	Intergenic	novelGene_8239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATACTGCATGTGCGTGC	NA	False	NA	NA	False	NA	NA	NA	35509613	35509425	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_35509400_35509600
m54284U_201217_021426/171902454/ccs	chr1	-	156	1	Intergenic	novelGene_452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAATAA	7040	False	NA	NA	False	NA	NA	NA	165996327	165996171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_165996200_165996300
m54284U_201217_021426/171902971/ccs	chr10	-	175	1	Intergenic	novelGene_5330	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTAAAGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	61189335	61189160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_61189200_61189300
m54284U_201217_021426/172032594/ccs	chr5	-	194	1	Intergenic	novelGene_2825	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGGAAGAAGTCCAAGG	NA	False	NA	NA	False	NA	NA	NA	117652102	117651908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_117651900_117652100
m54284U_201217_021426/172034697/ccs	chr15	-	168	1	Intergenic	novelGene_7757	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAAGTTCCC	NA	False	NA	NA	False	NA	NA	NA	73335723	73335555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_73335600_73335700
m54284U_201217_021426/172100170/ccs	chr11	+	5479	25	NIC	ENSMUSG00000020741.18	novel	5379	26	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_12	70.5754127787354	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCCAGCCTTTCCTGTGT	NA	False	NA	26	True	AATAAA	-20	NA	74540320	74561673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
m54284U_201217_021426/172229826/ccs	chr12	-	185	1	Intergenic	novelGene_6773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAAGTTCCAGGGCC	NA	False	NA	NA	False	NA	NA	NA	81835216	81835031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_81835000_81835200
m54284U_201217_021426/172230170/ccs	chr7	+	295	1	Intergenic	novelGene_4145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAGAAAGAAACGTAG	NA	False	NA	NA	False	NA	NA	NA	138866406	138866701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_138866400_138866700
m54284U_201217_021426/172230914/ccs	chr4	+	209	1	Intergenic	novelGene_2038	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGCGTTATAATGCC	NA	False	NA	NA	False	AAAAAG	-13	NA	116951075	116951284	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116951100_116951300
m54284U_201217_021426/172296292/ccs	chr6	-	1921	1	NIC	ENSMUSG00000030172.16	novel	3865	18	NA	NA	0	-22262	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATGGATATATATTGTA	NA	False	NA	NA	False	AAGAAA	-9	NA	119825128	119823207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_119823200_119825100
m54284U_201217_021426/172362258/ccs	chr3	+	182	1	Intergenic	novelGene_1549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTTTTACATATTAT	9986	False	NA	NA	False	NA	NA	NA	93457816	93457998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_93457800_93458000
m54284U_201217_021426/172362314/ccs	chr10	-	134	1	Intergenic	novelGene_5256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	29	False	NA	NA	False	NA	NA	NA	35711853	35711719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_35711700_35711900
m54284U_201217_021426/17237482/ccs	chr16	+	170	1	Intergenic	novelGene_8248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAGGTGTTAAG	537	False	NA	NA	False	NA	NA	NA	36828936	36829106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_36828900_36829100
m54284U_201217_021426/17237793/ccs	chr5	-	199	1	Intergenic	novelGene_2534	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAAAGTCTGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	33077218	33077019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_33077000_33077200
m54284U_201217_021426/172556516/ccs	chr6	+	173	1	Intergenic	novelGene_3125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGTACTTTTTCT	6854	False	NA	5	True	NA	NA	NA	29255507	29255680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29255500_29255700
m54284U_201217_021426/172556734/ccs	chr13	-	188	1	Intergenic	novelGene_7213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACCTGCTGCTTCCCAT	NA	False	NA	NA	False	NA	NA	NA	75970634	75970446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_75970400_75970600
m54284U_201217_021426/172621907/ccs	chr1	-	202	1	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTACTCCCTGTCTGCCC	4856	False	NA	NA	False	NA	NA	NA	34069005	34068803	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_34068800_34069000
m54284U_201217_021426/172622452/ccs	chr19	-	180	1	Intergenic	novelGene_9331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTCATTTGGTT	6562	False	NA	NA	False	NA	NA	NA	47912725	47912545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_47912500_47912700
m54284U_201217_021426/172624132/ccs	chr2	+	267	1	Intergenic	novelGene_1313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCCAGAGTAATAGTGT	NA	False	NA	NA	False	NA	NA	NA	179885355	179885622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_179885400_179885600
m54284U_201217_021426/172755208/ccs	chr7	-	135	1	Intergenic	novelGene_3915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAGATACAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	79896720	79896585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79896600_79896700
m54284U_201217_021426/172755565/ccs	chr3	+	181	1	Intergenic	novelGene_1369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAAGGGGTTTATCTGAG	NA	False	NA	NA	False	NA	NA	NA	30831463	30831644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_30831500_30831600
m54284U_201217_021426/172819034/ccs	chr16	-	194	1	Intergenic	novelGene_8187	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTTGAAAAAGTCAATG	NA	False	NA	NA	False	NA	NA	NA	30772775	30772581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_30772600_30772800
m54284U_201217_021426/172884473/ccs	chr6	+	173	1	Intergenic	novelGene_3127	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGTGGAAAGC	NA	False	NA	NA	False	NA	NA	NA	29390686	29390859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29390700_29390900
m54284U_201217_021426/172886540/ccs	chr5	-	192	1	Intergenic	novelGene_2620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCAGAAGCAATTTAAAT	NA	False	NA	NA	False	NA	NA	NA	73664676	73664484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_73664500_73664700
m54284U_201217_021426/172949546/ccs	chr10	-	183	1	Intergenic	novelGene_5489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACTGGAATTAAAAGAGAG	6701	False	NA	NA	False	NA	NA	NA	88472788	88472605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_88472600_88472800
m54284U_201217_021426/172949878/ccs	chr4	-	175	1	Intergenic	novelGene_2372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTGTTTAAAATT	7415	False	NA	NA	False	NA	NA	NA	148715942	148715767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_148715800_148715900
m54284U_201217_021426/172950071/ccs	chr15	-	176	1	Intergenic	novelGene_7629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAAACCT	NA	False	NA	NA	False	NA	NA	NA	8835156	8834980	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_8835000_8835200
m54284U_201217_021426/172950260/ccs	chr12	+	185	1	Intergenic	novelGene_6561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGAAATCTTTTAAAAAG	NA	False	NA	NA	False	NA	NA	NA	8887756	8887941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_8887800_8887900
m54284U_201217_021426/172951923/ccs	chr15	+	171	1	Intergenic	novelGene_7788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAGTCTCAA	4977	False	NA	NA	False	NA	NA	NA	76910850	76911021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76910800_76911000
m54284U_201217_021426/173082326/ccs	chr10	-	207	1	Intergenic	novelGene_5259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATGTTAAAGCTAAAAA	NA	False	NA	NA	False	NA	NA	NA	38712814	38712607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_38712600_38712800
m54284U_201217_021426/173083452/ccs	chr12	+	169	1	Intergenic	novelGene_6883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTTTTGTTTGTTTGT	1176	False	NA	NA	False	NA	NA	NA	108188354	108188523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_108188400_108188500
m54284U_201217_021426/173147005/ccs	chr7	-	188	1	Intergenic	novelGene_3935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTCACCTGTTCTGCG	NA	False	NA	NA	False	NA	NA	NA	81665944	81665756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_81665800_81665900
m54284U_201217_021426/173147861/ccs	chrM	+	821	1	FSM	ENSMUSG00000064353.1	ENSMUST00000082404.1	70	1	-751	0	-751	0	mono-exon	FALSE	NA	NA	NA	NA	NA	864	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCCTACCCATTCCAAC	2	True	NA	NA	False	NA	NA	NA	6190	7011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_6200_7000
m54284U_201217_021426/173278359/ccs	chr15	-	187	1	Intergenic	novelGene_7945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCCTGGGCTGGTGAG	NA	False	NA	NA	False	NA	NA	NA	98682010	98681823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98681800_98682000
m54284U_201217_021426/173343198/ccs	chr15	-	154	1	Intergenic	novelGene_7658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAATAAATTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	25718759	25718605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_25718600_25718800
m54284U_201217_021426/173410775/ccs	chr2	+	1243	1	FSM	ENSMUSG00000075391.7	ENSMUST00000120770.2	555	1	-52	-636	-52	636	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTATTTGTAATTATG	5836	False	NA	NA	False	TATAAA	-27	NA	35230368	35231611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_35230400_35231600
m54284U_201217_021426/173474013/ccs	chr11	+	186	1	Intergenic	novelGene_6088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCCACCTTTCTTATC	NA	False	NA	NA	False	NA	NA	NA	79827900	79828086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79827900_79828100
m54284U_201217_021426/173476127/ccs	chr6	+	171	1	Intergenic	novelGene_3475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAATGTCTAGTTA	NA	False	NA	NA	False	NA	NA	NA	122395529	122395700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_122395500_122395700
m54284U_201217_021426/173670795/ccs	chr17	-	179	1	Intergenic	novelGene_8788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATATTGAAACCATTTTT	NA	False	NA	NA	False	NA	NA	NA	93174580	93174401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_93174400_93174600
m54284U_201217_021426/17367798/ccs	chr11	+	183	1	Intergenic	novelGene_6361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAAAAAGAGAATAACCAC	NA	False	NA	NA	False	NA	NA	NA	103587485	103587668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_103587500_103587700
m54284U_201217_021426/173737981/ccs	chr17	-	181	1	Intergenic	novelGene_8599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAATAAATTCCAGA	NA	False	NA	NA	False	NA	NA	NA	43264283	43264102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_43264100_43264300
m54284U_201217_021426/173868377/ccs	chr17	-	234	1	Intergenic	novelGene_8677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCCTCCATTGAATTACA	NA	False	NA	NA	False	NA	NA	NA	66003699	66003465	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66003500_66003700
m54284U_201217_021426/173933426/ccs	chr10	-	190	1	ISM	ENSMUSG00000020074.8	ENSMUST00000217940.2	3178	9	20710	1562	416	-1391	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACTATTTACTTCTTG	9075	False	NA	NA	False	NA	NA	NA	62607339	62607149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_-_62607100_62607300
m54284U_201217_021426/173934041/ccs	chr13	+	207	1	Intergenic	novelGene_7297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGCCCAGAGACTAATTA	NA	False	NA	NA	False	NA	NA	NA	107766594	107766801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_107766600_107766800
m54284U_201217_021426/173998305/ccs	chr11	+	187	1	Intergenic	novelGene_5823	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAAGTGGTTTCCCTG	991	False	NA	NA	False	NA	NA	NA	52283687	52283874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_52283700_52283900
m54284U_201217_021426/174000445/ccs	chr12	+	192	1	Intergenic	novelGene_6887	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTGTAGAACTTGTAGA	NA	False	NA	NA	False	NA	NA	NA	108711891	108712083	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_108711900_108712100
m54284U_201217_021426/174000837/ccs	chr10	+	189	1	Intergenic	novelGene_5426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAACTGGAGACAATTT	NA	False	NA	NA	False	NA	NA	NA	77313727	77313916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_77313700_77313900
m54284U_201217_021426/174063917/ccs	chr9	+	177	1	Intergenic	novelGene_4742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTGTAGGAATACCAAT	NA	False	NA	NA	False	NA	NA	NA	44839310	44839487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_44839300_44839500
m54284U_201217_021426/174064935/ccs	chr9	-	226	1	Intergenic	novelGene_4979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGGAAACTATGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	81974912	81974686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_81974700_81974900
m54284U_201217_021426/174066260/ccs	chr1	+	188	1	Intergenic	novelGene_239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGAAGTTAACATAGAA	6682	False	NA	NA	False	NA	NA	NA	87601272	87601460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_87601300_87601500
m54284U_201217_021426/174130676/ccs	chr4	-	189	1	Intergenic	novelGene_2270	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAGCAGAGATC	6733	False	NA	NA	False	NA	NA	NA	137242384	137242195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_137242200_137242400
m54284U_201217_021426/174260464/ccs	chr15	-	166	1	Intergenic	novelGene_7990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGTATAC	NA	False	NA	NA	False	NA	NA	NA	100254570	100254404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100254400_100254600
m54284U_201217_021426/174326222/ccs	chr3	-	186	1	Intergenic	novelGene_1703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGATTGTTTCATGGTT	NA	False	NA	NA	False	NA	NA	NA	138145432	138145246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_138145200_138145400
m54284U_201217_021426/174328544/ccs	chr5	-	165	1	Intergenic	novelGene_3026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAATCTTAGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	140720490	140720325	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_140720300_140720500
m54284U_201217_021426/17433300/ccs	chr13	-	183	1	Intergenic	novelGene_7323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGGAAATCAGGGA	NA	False	NA	NA	False	NA	NA	NA	117359797	117359614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_117359600_117359800
m54284U_201217_021426/17435067/ccs	chr7	-	178	1	Intergenic	novelGene_3756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAGCCAATCTCCTGAA	NA	False	NA	NA	False	NA	NA	NA	28994424	28994246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28994200_28994400
m54284U_201217_021426/174458535/ccs	chr17	-	1972	1	NIC	ENSMUSG00000040888.11	novel	1776	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGATTTCTGGATGTA	NA	False	NA	6	True	ATTAAA	-27	NA	24915130	24913158	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_24913200_24915100
m54284U_201217_021426/174459158/ccs	chr15	-	167	1	Intergenic	novelGene_7639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTTTTAAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	11471887	11471720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_11471700_11471900
m54284U_201217_021426/174589411/ccs	chr3	-	174	1	Intergenic	novelGene_1488	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAGAAGAGG	8647	False	NA	NA	False	NA	NA	NA	88502469	88502295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88502300_88502500
m54284U_201217_021426/174589510/ccs	chr17	-	186	1	Intergenic	novelGene_8663	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	57349468	57349282	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_57349300_57349500
m54284U_201217_021426/174655183/ccs	chr4	-	299	1	Intergenic	novelGene_2379	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	149254505	149254206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_149254200_149254500
m54284U_201217_021426/174655406/ccs	chr14	+	176	1	Intergenic	novelGene_7537	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATGCTTAATCTTG	1947	False	NA	NA	False	NA	NA	NA	73511981	73512157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_73512000_73512200
m54284U_201217_021426/174784524/ccs	chr4	-	186	1	Intergenic	novelGene_2435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTAAACTGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	155848367	155848181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155848200_155848400
m54284U_201217_021426/174786067/ccs	chrX	+	175	1	Intergenic	novelGene_9387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGTTAGAATGTT	NA	False	NA	NA	False	NA	NA	NA	12533642	12533817	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_12533600_12533800
m54284U_201217_021426/174982284/ccs	chr16	+	196	1	Intergenic	novelGene_8219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATCCACCTGCCTCTGCC	1490	False	NA	NA	False	NA	NA	NA	32468672	32468868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_32468700_32468900
m54284U_201217_021426/175047914/ccs	chr13	+	169	1	Intergenic	novelGene_7227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAATCTTAAGC	NA	False	NA	NA	False	NA	NA	NA	90349350	90349519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_90349400_90349500
m54284U_201217_021426/175048941/ccs	chrX	-	217	1	Intergenic	novelGene_9726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGGTGAGATGGCTCAC	NA	False	NA	NA	False	NA	NA	NA	161635481	161635264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161635300_161635500
m54284U_201217_021426/175114590/ccs	chr2	+	161	1	Intergenic	novelGene_1145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	6845	False	NA	NA	False	NA	NA	NA	154435598	154435759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154435600_154435800
m54284U_201217_021426/175178054/ccs	chrX	+	189	1	Intergenic	novelGene_9597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGTATGTCTCCATCTT	NA	False	NA	NA	False	NA	NA	NA	104194707	104194896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_104194700_104194900
m54284U_201217_021426/175179294/ccs	chr19	-	1983	1	FSM	ENSMUSG00002075338.1	ENSMUST00020181851.1	78	1	0	-1905	0	1905	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCAAAAAAAAAAAAAAAGAA	1146	False	NA	NA	False	NA	NA	NA	37126562	37124579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_37124600_37126600
m54284U_201217_021426/175244791/ccs	chr5	-	191	1	Intergenic	novelGene_2640	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGAAGAGGCCAGCTA	NA	False	NA	NA	False	NA	NA	NA	77493963	77493772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77493800_77494000
m54284U_201217_021426/175245410/ccs	chr13	+	182	1	Intergenic	novelGene_6986	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTGATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	21340259	21340441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_21340300_21340400
m54284U_201217_021426/175245523/ccs	chr11	-	329	1	Antisense	novelGene_ENSMUSG00000086636.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CGAAAAACCAAAAAAAAAAA	2343	False	NA	NA	False	NA	NA	NA	62413975	62413646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_62413600_62414000
m54284U_201217_021426/175310595/ccs	chr16	-	3762	1	NIC	ENSMUSG00000060657.9	novel	7751	27	NA	NA	0	-14539	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	9816	False	NA	NA	False	NA	NA	NA	13977131	13973369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_13973400_13977100
m54284U_201217_021426/175311410/ccs	chrX	-	189	1	Intergenic	novelGene_9399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAGCAAGGCAGCTTA	NA	False	NA	NA	False	NA	NA	NA	13171382	13171193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_13171200_13171400
m54284U_201217_021426/175374756/ccs	chr17	+	4458	22	NIC	ENSMUSG00000024462.18	novel	5248	23	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	25.5127907985596	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACTGTCCTGTGAACTG	NA	False	NA	40	True	AATAAA	-28	NA	37356857	37385196	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_+_37357182_37357586_37357669_37358345_37358550_37359312_37359499_37360544_37360690_37361890_37362052_37365022_37365158_37365628_37365800_37366737_37366840_37367187_37367254_37367679_37367872_37373425_37373669_37374221_37374286_37375551_37375630_37378667_37378801_37380003_37380121_37380204_37380313_37380872_37380967_37381545_37381674_37382744_37382874_37383035_37383180_37383744
m54284U_201217_021426/175375388/ccs	chr6	+	193	1	Intergenic	novelGene_3401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTAAAGTTGACTTAAA	NA	False	NA	NA	False	NA	NA	NA	95101416	95101609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_95101400_95101600
m54284U_201217_021426/175441255/ccs	chr11	+	189	1	Intergenic	novelGene_5999	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAACGAAGCCAGGCAT	NA	False	NA	NA	False	NA	NA	NA	74995674	74995863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_74995700_74995900
m54284U_201217_021426/175442637/ccs	chr11	-	198	1	Intergenic	novelGene_6225	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAACAAGATCTCATG	NA	False	NA	NA	False	NA	NA	NA	95318973	95318775	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95318800_95319000
m54284U_201217_021426/175508198/ccs	chr16	-	176	1	Intergenic	novelGene_8303	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	84843033	84842857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_84842900_84843000
m54284U_201217_021426/175571662/ccs	chr4	+	267	1	Intergenic	novelGene_1833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAAAGGTGCCGTCACC	7239	False	NA	NA	False	ATTAAA	-24	NA	44011685	44011952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_44011700_44012000
m54284U_201217_021426/175572567/ccs	chr2	-	197	1	Intergenic	novelGene_1074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGAATATGTAGCAATA	1858	False	NA	NA	False	NA	NA	NA	131010512	131010315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_131010300_131010500
m54284U_201217_021426/175639375/ccs	chr7	-	181	1	Intergenic	novelGene_4174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATACCCTATAGGC	NA	False	NA	NA	False	NA	NA	NA	141132647	141132466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_141132500_141132600
m54284U_201217_021426/17564575/ccs	chr16	-	180	1	Intergenic	novelGene_8210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	7158	False	NA	NA	False	NA	NA	NA	32140854	32140674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32140700_32140900
m54284U_201217_021426/17564592/ccs	chr5	-	182	1	Intergenic	novelGene_2715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATAAATTCT	NA	False	NA	NA	False	NA	NA	NA	104809000	104808818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_104808800_104809000
m54284U_201217_021426/175704182/ccs	chr7	+	176	1	Intergenic	novelGene_3751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	28568858	28569034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28568900_28569000
m54284U_201217_021426/175768778/ccs	chr2	+	193	1	Intergenic	novelGene_604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCTGCCTGCAACCATA	NA	False	NA	NA	False	NA	NA	NA	17974647	17974840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_17974600_17974800
m54284U_201217_021426/175768999/ccs	chr11	+	185	1	Intergenic	novelGene_5826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGCTGAACATTCATTTAA	NA	False	NA	NA	False	NA	NA	NA	53085529	53085714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53085500_53085700
m54284U_201217_021426/175769239/ccs	chr11	-	196	1	Intergenic	novelGene_6238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAACGAGAGAAAGAAA	1913	False	NA	NA	False	NA	NA	NA	95840555	95840359	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95840400_95840600
m54284U_201217_021426/175835713/ccs	chr13	-	186	1	Intergenic	novelGene_7034	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAGTAGATAAAC	NA	False	NA	NA	False	NA	NA	NA	41701361	41701175	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_41701200_41701400
m54284U_201217_021426/175900805/ccs	chr10	+	216	1	Intergenic	novelGene_5531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTTTTCCATGATGT	NA	False	NA	NA	False	NA	NA	NA	108229452	108229668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_108229500_108229700
m54284U_201217_021426/175965312/ccs	chr9	-	3788	1	Antisense	novelGene_ENSMUSG00000032267.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	48917674	48913886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_48913900_48917700
m54284U_201217_021426/175966805/ccs	chr11	-	171	1	Intergenic	novelGene_6527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAACA	NA	False	NA	NA	False	NA	NA	NA	121215382	121215211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_121215200_121215400
m54284U_201217_021426/176097084/ccs	chr14	-	201	1	Intergenic	novelGene_7366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTACATAGTCTCTA	2991	False	NA	NA	False	NA	NA	NA	26439884	26439683	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26439700_26439900
m54284U_201217_021426/176098008/ccs	chr8	-	175	1	Intergenic	novelGene_4362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAAAACAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	83790455	83790280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_83790300_83790500
m54284U_201217_021426/176161192/ccs	chr8	-	198	1	Intergenic	novelGene_4602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAGCAAAACCAAACACC	NA	False	NA	NA	False	NA	NA	NA	125607661	125607463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_125607500_125607700
m54284U_201217_021426/176163520/ccs	chr11	+	260	1	Intergenic	novelGene_6050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGTCTCTTGGTTATT	NA	False	NA	NA	False	ACTAAA	-6	NA	77554187	77554447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_77554200_77554400
m54284U_201217_021426/176227033/ccs	chr10	-	201	1	Intergenic	novelGene_5514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAATGATAAGAATACT	6720	False	NA	NA	False	NA	NA	NA	95225987	95225786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_95225800_95226000
m54284U_201217_021426/176292565/ccs	chr3	+	5002	1	NIC	ENSMUSG00000038205.13	novel	1878	7	NA	NA	115	-7469	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTGAACGTTTTGTCA	NA	False	NA	NA	False	NA	NA	NA	97565644	97570646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_+_97565600_97570600
m54284U_201217_021426/176293648/ccs	chr8	-	193	1	Intergenic	novelGene_4378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGACTACTTGGGAGTTA	NA	False	NA	NA	False	NA	NA	NA	85666948	85666755	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_85666800_85666900
m54284U_201217_021426/176294138/ccs	chr7	-	196	1	Intergenic	novelGene_3977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCTACACAAGAAGCTG	NA	False	NA	NA	False	NA	NA	NA	100403690	100403494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_100403500_100403700
m54284U_201217_021426/176294618/ccs	chr16	+	187	1	Intergenic	novelGene_8205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTTTTTAAAAAATAGTT	1759	False	NA	NA	False	NA	NA	NA	31950391	31950578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_31950400_31950600
m54284U_201217_021426/176358271/ccs	chr13	-	197	1	Intergenic	novelGene_7216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGCCACTGTTTATTGAT	NA	False	NA	NA	False	NA	NA	NA	79466824	79466627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_79466600_79466800
m54284U_201217_021426/176359236/ccs	chrX	-	180	1	Intergenic	novelGene_9709	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	159451103	159450923	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_159450900_159451100
m54284U_201217_021426/176488651/ccs	chr10	-	166	1	Intergenic	novelGene_5211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAGTGAATTTAGTG	NA	False	NA	NA	False	NA	NA	NA	19443345	19443179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_19443200_19443300
m54284U_201217_021426/176490057/ccs	chr17	-	171	1	Intergenic	novelGene_8560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	519	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTTTTAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35800527	35800356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35800400_35800500
m54284U_201217_021426/176490409/ccs	chr5	-	175	1	Intergenic	novelGene_2676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATTCCAGTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	92905927	92905752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92905800_92905900
m54284U_201217_021426/176619663/ccs	chr4	-	174	1	Intergenic	novelGene_1964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAGAGAAGAGAAGAGA	NA	False	NA	NA	False	NA	NA	NA	103176122	103175948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_103175900_103176100
m54284U_201217_021426/176686690/ccs	chr6	-	185	1	Intergenic	novelGene_3370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTCCACAATAGTGGCT	NA	False	NA	NA	False	NA	NA	NA	86526869	86526684	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_86526700_86526900
m54284U_201217_021426/176751122/ccs	chr1	+	1813	1	Intergenic	novelGene_443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAAGTGCT	7954	False	NA	NA	False	NA	NA	NA	164286068	164287881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_164286100_164287900
m54284U_201217_021426/176751775/ccs	chr6	+	246	1	Intergenic	novelGene_3128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCAGCACTGGGGAGGC	NA	False	NA	NA	False	NA	NA	NA	29459926	29460172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29459900_29460200
m54284U_201217_021426/176816509/ccs	chr1	-	176	1	Intergenic	novelGene_558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAAATTGCACACATGC	1994	False	NA	NA	False	NA	NA	NA	192097796	192097620	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_192097600_192097800
m54284U_201217_021426/176818417/ccs	chr11	+	183	1	Intergenic	novelGene_6190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAATATGTCTGG	NA	False	NA	NA	False	NA	NA	NA	88492371	88492554	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_88492400_88492600
m54284U_201217_021426/176884088/ccs	chr8	-	175	1	Intergenic	novelGene_4563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAAGAAAG	6965	False	NA	NA	False	NA	NA	NA	122425970	122425795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_122425800_122426000
m54284U_201217_021426/176949688/ccs	chr13	+	178	1	Intergenic	novelGene_7069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAAGTGGGGTAG	NA	False	NA	NA	False	NA	NA	NA	51672606	51672784	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_51672600_51672800
m54284U_201217_021426/17695214/ccs	chr11	-	185	1	Intergenic	novelGene_6390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTACCTGGAAGGACGCCA	283	False	NA	NA	False	NA	NA	NA	106488143	106487958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_106488000_106488100
m54284U_201217_021426/17695537/ccs	chr18	-	177	1	Intergenic	novelGene_8981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCATTTTGGGGAT	NA	False	NA	NA	False	NA	NA	NA	63981762	63981585	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_63981600_63981800
m54284U_201217_021426/17697237/ccs	chr17	-	224	1	Intergenic	novelGene_8515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGACCAGCATCGTTGA	NA	False	NA	NA	False	NA	NA	NA	31916395	31916171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_31916200_31916400
m54284U_201217_021426/177013134/ccs	chr8	+	161	1	Intergenic	novelGene_4472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATTTAAAGATACAAAC	NA	False	NA	NA	False	NA	NA	NA	107888225	107888386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_107888200_107888400
m54284U_201217_021426/177014587/ccs	chrX	-	476	1	FSM	ENSMUSG00000083621.2	ENSMUST00000119571.2	408	1	-16	-52	-16	52	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATACCTCGTGCTGCAAA	NA	False	NA	NA	False	AATAAA	-28	NA	51861642	51861166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_51861200_51861600
m54284U_201217_021426/1770193/ccs	chr3	-	176	1	Intergenic	novelGene_1363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAGAATACT	NA	False	NA	NA	False	NA	NA	NA	22140928	22140752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_22140800_22140900
m54284U_201217_021426/177080240/ccs	chr7	-	175	1	Intergenic	novelGene_3777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29924979	29924804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29924800_29925000
m54284U_201217_021426/177080343/ccs	chr17	-	190	1	Intergenic	novelGene_8342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGGGGAAAGCTTAATCA	NA	False	NA	NA	False	NA	NA	NA	3572300	3572110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_3572100_3572300
m54284U_201217_021426/1771113/ccs	chr7	-	174	1	Intergenic	novelGene_3848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAGTGTTGGAAAC	NA	False	NA	NA	False	NA	NA	NA	45583144	45582970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_45583000_45583100
m54284U_201217_021426/177210246/ccs	chr5	-	130	1	Intergenic	novelGene_2920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	125468142	125468012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125468000_125468100
m54284U_201217_021426/177210683/ccs	chr2	-	176	1	Intergenic	novelGene_1180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAAGAGTCTTTCTCT	NA	False	NA	NA	False	NA	NA	NA	156283085	156282909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156282900_156283100
m54284U_201217_021426/177406828/ccs	chr15	+	176	1	Intergenic	novelGene_7770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTTATTTATATG	NA	False	NA	NA	False	NA	NA	NA	76107487	76107663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_76107500_76107700
m54284U_201217_021426/177472403/ccs	chr4	+	334	1	Intergenic	novelGene_2188	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTAGATTCAGCTTTAG	NA	False	NA	NA	False	NA	NA	NA	132031018	132031352	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132031000_132031400
m54284U_201217_021426/177538881/ccs	chr3	+	233	1	Intergenic	novelGene_1440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCACCAGGCACATGCATA	8604	False	NA	NA	False	NA	NA	NA	79170263	79170496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_79170300_79170500
m54284U_201217_021426/17762027/ccs	chr7	-	189	1	Intergenic	novelGene_4028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTAGGAATAAGCC	NA	False	NA	NA	False	NA	NA	NA	110706885	110706696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_110706700_110706900
m54284U_201217_021426/177670369/ccs	chr19	-	173	1	Intergenic	novelGene_9114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAAAGAACTAAGCC	NA	False	NA	NA	False	NA	NA	NA	6087356	6087183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_6087200_6087400
m54284U_201217_021426/177735305/ccs	chr10	-	202	1	Intergenic	novelGene_5456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACTCTGTGGCTCAAA	1306	False	NA	NA	False	NA	NA	NA	80853897	80853695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_80853700_80853900
m54284U_201217_021426/177800650/ccs	chr3	-	211	1	Intergenic	novelGene_1619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGTAAATCAAAATGAGTG	6553	False	NA	NA	False	NA	NA	NA	104774441	104774230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_104774200_104774400
m54284U_201217_021426/177801375/ccs	chr12	-	189	1	Intergenic	novelGene_6718	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTACGGTGGATAACCA	4781	False	NA	NA	False	NA	NA	NA	73198500	73198311	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_73198300_73198500
m54284U_201217_021426/177801879/ccs	chr8	-	186	1	Intergenic	novelGene_4478	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGAAGCCATGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	108291294	108291108	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_108291100_108291300
m54284U_201217_021426/177864905/ccs	chr3	-	232	1	Intergenic	novelGene_1677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCTGATAAGTCTGTCC	NA	False	NA	NA	False	NA	NA	NA	129296119	129295887	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_129295900_129296100
m54284U_201217_021426/177931069/ccs	chr15	-	243	1	Intergenic	novelGene_7728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATAGTAACCAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	58002614	58002371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_58002400_58002600
m54284U_201217_021426/177997357/ccs	chr19	+	179	1	Intergenic	novelGene_9083	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCTGAGACAAGAAGCAA	NA	False	NA	NA	False	NA	NA	NA	4395903	4396082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_4395900_4396100
m54284U_201217_021426/177998107/ccs	chr11	+	197	1	Intergenic	novelGene_6399	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACACTTCCTATTGAAG	NA	False	NA	NA	False	NA	NA	NA	106909836	106910033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106909800_106910000
m54284U_201217_021426/177998191/ccs	chr14	-	211	1	Intergenic	novelGene_7492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGCACAAGACAAGGAC	8717	False	NA	NA	False	NA	NA	NA	57916757	57916546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_57916500_57916800
m54284U_201217_021426/177998307/ccs	chr10	+	182	1	Intergenic	novelGene_5613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAACAAGGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	127916493	127916675	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_127916500_127916700
m54284U_201217_021426/178064120/ccs	chr4	-	201	1	Intergenic	novelGene_2434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTATCAAAAATAAACAGT	NA	False	NA	NA	False	NA	NA	NA	155803378	155803177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_155803200_155803400
m54284U_201217_021426/178126909/ccs	chr2	-	177	1	Intergenic	novelGene_1101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAGAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	144395578	144395401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_144395400_144395600
m54284U_201217_021426/178193357/ccs	chr19	+	166	1	Intergenic	novelGene_9162	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAAATCTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	11866559	11866725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_11866600_11866700
m54284U_201217_021426/178194378/ccs	chr19	-	176	1	Intergenic	novelGene_9194	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTATCTGAGCAAGCCA	NA	False	NA	NA	False	NA	NA	NA	25235536	25235360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_25235400_25235500
m54284U_201217_021426/178258473/ccs	chr1	-	184	1	Intergenic	novelGene_291	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTATTAGGCTAAGCAG	NA	False	NA	NA	False	NA	NA	NA	128063493	128063309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_128063300_128063500
m54284U_201217_021426/17825984/ccs	chr5	-	193	1	Intergenic	novelGene_2883	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAAAATTACAAAC	NA	False	NA	NA	False	NA	NA	NA	123551135	123550942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123550900_123551100
m54284U_201217_021426/178259968/ccs	chr8	-	501	1	FSM	ENSMUSG00000060019.7	ENSMUST00000073722.7	342	1	-80	-79	-80	79	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGAACAAGCCAGGCGTG	NA	False	NA	NA	False	NA	NA	NA	107300062	107299561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107299600_107300100
m54284U_201217_021426/178389456/ccs	chr4	+	176	1	Intergenic	novelGene_2259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTTTTAAAAATGGGGG	NA	False	NA	NA	False	NA	NA	NA	136117743	136117919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_136117700_136117900
m54284U_201217_021426/178454539/ccs	chr4	-	180	1	Intergenic	novelGene_2349	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	146619512	146619332	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146619300_146619500
m54284U_201217_021426/178455924/ccs	chr4	-	183	1	Intergenic	novelGene_1933	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGAGTAGCCCACAGT	NA	False	NA	NA	False	NA	NA	NA	89624026	89623843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_89623800_89624000
m54284U_201217_021426/178456007/ccs	chr16	-	184	1	Intergenic	novelGene_8143	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTGGCCATGCTTGCTT	3334	False	NA	NA	False	NA	NA	NA	20451036	20450852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20450900_20451000
m54284U_201217_021426/178585789/ccs	chrX	-	175	1	Intergenic	novelGene_9728	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAATCTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	161711496	161711321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_161711300_161711500
m54284U_201217_021426/178587796/ccs	chr7	-	163	1	Intergenic	novelGene_3912	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGGAAAAAAGAAAAGA	2244	False	NA	NA	False	NA	NA	NA	79825399	79825236	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79825200_79825400
m54284U_201217_021426/178651745/ccs	chr12	-	235	1	Intergenic	novelGene_6742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTTCATCATATAATTTG	NA	False	NA	NA	False	NA	NA	NA	77351133	77350898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_77350900_77351100
m54284U_201217_021426/178653874/ccs	chr9	+	160	1	Intergenic	novelGene_5076	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTTAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	108109859	108110019	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_108109900_108110000
m54284U_201217_021426/178716848/ccs	chr4	-	185	1	Intergenic	novelGene_2180	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAAGCCATCTCTCCAG	NA	False	NA	NA	False	NA	NA	NA	131745326	131745141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_131745100_131745300
m54284U_201217_021426/178782614/ccs	chr6	-	184	1	Intergenic	novelGene_3473	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAACTAAACAATTGCA	6897	False	NA	NA	False	NA	NA	NA	122276338	122276154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122276200_122276300
m54284U_201217_021426/178914174/ccs	chr19	-	161	1	Intergenic	novelGene_9335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTACTGGTCTTGAATGT	7471	False	NA	NA	False	NA	NA	NA	53383134	53382973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_53383000_53383100
m54284U_201217_021426/178916168/ccs	chr12	-	171	1	Intergenic	novelGene_6776	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAATCTAAAAAATGG	NA	False	NA	NA	False	NA	NA	NA	81926332	81926161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_81926200_81926300
m54284U_201217_021426/17893008/ccs	chr12	-	198	1	Intergenic	novelGene_6876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	105698140	105697942	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_105697900_105698100
m54284U_201217_021426/17893862/ccs	chr7	+	182	1	Intergenic	novelGene_3667	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAACAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	15990094	15990276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_15990100_15990300
m54284U_201217_021426/179045169/ccs	chr4	+	185	1	Intergenic	novelGene_2331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTAGGTAAAAAATATTC	NA	False	NA	NA	False	NA	NA	NA	145481668	145481853	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_145481700_145481900
m54284U_201217_021426/179111218/ccs	chr11	+	3461	25	NNC	ENSMUSG00000020782.19	novel	791	6	NA	NA	2572	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	218.53457249369	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGAGGACCCGTGCTT	NA	False	NA	40	True	AATAAA	-25	NA	115727720	115746606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_115727869_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742942_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018_115745182_115745372_115745402_115745637_115745686_115745888_115745932_115746017_115746080_115746294
m54284U_201217_021426/179111296/ccs	chr7	-	183	1	Intergenic	novelGene_3953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGTACAGATAGATATA	NA	False	NA	NA	False	NA	NA	NA	96580450	96580267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_96580300_96580400
m54284U_201217_021426/179112276/ccs	chr7	+	181	1	Intergenic	novelGene_3610	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAATTTAAAAGAAG	248	False	NA	NA	False	NA	NA	NA	3293408	3293589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_3293400_3293600
m54284U_201217_021426/179112490/ccs	chr13	-	184	1	Intergenic	novelGene_7155	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTGAGCCCAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	63605473	63605289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_63605300_63605500
m54284U_201217_021426/179241612/ccs	chr1	+	237	1	Intergenic	novelGene_404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTTTTATTAGATATT	9024	False	NA	NA	False	AATAAA	-13	NA	156222173	156222410	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_156222200_156222400
m54284U_201217_021426/179242842/ccs	chr9	-	191	1	Intergenic	novelGene_4647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACTATTTGAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	20746846	20746655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_20746700_20746800
m54284U_201217_021426/179306790/ccs	chrX	-	203	1	Intergenic	novelGene_9412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGAGTAGTAGCCAAAC	NA	False	NA	NA	False	NA	NA	NA	22523225	22523022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_22523000_22523200
m54284U_201217_021426/179307854/ccs	chr12	-	159	1	Intergenic	novelGene_6620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	1945	False	NA	NA	False	NA	NA	NA	32121881	32121722	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_32121700_32121900
m54284U_201217_021426/179308598/ccs	chr15	-	209	1	Intergenic	novelGene_7859	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCAGAATGAGGGAGTT	NA	False	NA	NA	False	NA	NA	NA	82002535	82002326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_82002300_82002500
m54284U_201217_021426/179309131/ccs	chr7	-	189	1	Intergenic	novelGene_4151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACGTTATTATATTGGG	4415	False	NA	NA	False	NA	NA	NA	139655764	139655575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_139655600_139655800
m54284U_201217_021426/179372204/ccs	chr5	-	303	1	Intergenic	novelGene_3014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAAGAACAT	NA	False	NA	NA	False	NA	NA	NA	139966591	139966288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_139966300_139966600
m54284U_201217_021426/179439997/ccs	chr9	-	162	1	Intergenic	novelGene_5069	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAGTAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	106897753	106897591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_106897600_106897800
m54284U_201217_021426/179505334/ccs	chrX	-	181	1	Intergenic	novelGene_9630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAATAAAAGACCTTCG	NA	False	NA	NA	False	NA	NA	NA	133448989	133448808	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_133448800_133449000
m54284U_201217_021426/179505627/ccs	chr7	-	178	1	Intergenic	novelGene_3688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAACAACAAAAGAAG	907	False	NA	NA	False	NA	NA	NA	19227082	19226904	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_19226900_19227100
m54284U_201217_021426/179569056/ccs	chr17	-	187	1	Intergenic	novelGene_8551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGCATTTAACTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	35305358	35305171	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35305200_35305400
m54284U_201217_021426/17956917/ccs	chr2	+	177	1	Intergenic	novelGene_1126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATATTTATTTTTTTA	3714	False	NA	2	True	NA	NA	NA	152419482	152419659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_152419500_152419700
m54284U_201217_021426/179635360/ccs	chr14	-	168	1	Intergenic	novelGene_7588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATAGCTAATCATTTT	NA	False	NA	NA	False	NA	NA	NA	104793848	104793680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_104793700_104793800
m54284U_201217_021426/179635802/ccs	chr10	-	187	1	Intergenic	novelGene_5377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTTAAAGGAATAACTG	5813	False	NA	NA	False	NA	NA	NA	67906839	67906652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_67906700_67906800
m54284U_201217_021426/179636415/ccs	chr11	-	174	1	Intergenic	novelGene_6485	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAATCAACCCCCAAA	NA	False	NA	NA	False	NA	NA	NA	116936306	116936132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116936100_116936300
m54284U_201217_021426/179701263/ccs	chr13	+	5112	1	Antisense	novelGene_ENSMUSG00000114423.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGACTTAGCTCCATT	NA	False	NA	NA	False	NA	NA	NA	66901217	66906329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_+_66901200_66906300
m54284U_201217_021426/179766134/ccs	chr1	-	201	1	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAATTCTCTGTTTAGCT	NA	False	NA	NA	False	NA	NA	NA	11512204	11512003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_11512000_11512200
m54284U_201217_021426/179767152/ccs	chr5	-	1777	1	Genic_Genomic	ENSMUSG00000054280.15	novel	NA	NA	NA	NA	-75	-16937	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAAACAAACCTTCCC	6978	False	NA	NA	False	NA	NA	NA	33011675	33009898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_-_33009900_33011700
m54284U_201217_021426/179767839/ccs	chr7	+	191	1	Intergenic	novelGene_3972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATTTTGTATGATTCTTG	NA	False	NA	30	True	NA	NA	NA	100169705	100169896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_100169700_100169900
m54284U_201217_021426/179833591/ccs	chr15	+	208	1	Intergenic	novelGene_7891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAGGTCAGAGGCAGG	9357	False	NA	NA	False	NA	NA	NA	85733194	85733402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_85733200_85733400
m54284U_201217_021426/179897209/ccs	chr19	-	194	1	Intergenic	novelGene_9112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGAATATTTGACTGGGA	4655	False	NA	NA	False	NA	NA	NA	5959516	5959322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5959300_5959500
m54284U_201217_021426/179964685/ccs	chr2	-	197	1	Intergenic	novelGene_1015	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAGTTTCTCTTCTACCA	NA	False	NA	NA	False	NA	NA	NA	120183922	120183725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_120183700_120183900
m54284U_201217_021426/180225842/ccs	chr19	-	1943	1	NIC	ENSMUSG00000118346.2	novel	775	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGGATTTCTTGATGT	5074	False	NA	-4	True	AATATA	-17	NA	8751831	8749888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_8749900_8751800
m54284U_201217_021426/18025207/ccs	chr13	+	184	1	Intergenic	novelGene_7285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGAGATGTTAATTTGT	NA	False	NA	NA	False	NA	NA	NA	104486680	104486864	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_104486700_104486900
m54284U_201217_021426/180289902/ccs	chr10	-	209	1	Intergenic	novelGene_5436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTGATCTTCCAGA	NA	False	NA	NA	False	NA	NA	NA	78338966	78338757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_78338800_78339000
m54284U_201217_021426/180290814/ccs	chr17	+	181	1	Intergenic	novelGene_8578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGAACTTATGAATCA	NA	False	NA	NA	False	NA	NA	NA	36266213	36266394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_36266200_36266400
m54284U_201217_021426/180357815/ccs	chr1	+	196	1	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAAGAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	29942065	29942261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_29942100_29942300
m54284U_201217_021426/180357879/ccs	chr7	+	196	1	Intergenic	novelGene_3687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTTGGAGGTGTGGCTC	1717	False	NA	NA	False	NA	NA	NA	19214296	19214492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_19214300_19214500
m54284U_201217_021426/180486169/ccs	chr19	-	3519	1	FSM	ENSMUSG00002076852.1	ENSMUST00020181828.1	152	1	-1388	-1979	-1388	1979	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTTAGAATTGTCATGG	9654	False	NA	-12	True	AATAAA	-15	NA	5895853	5892334	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr19_-_5892300_5895900
m54284U_201217_021426/180486249/ccs	chr9	-	173	1	Intergenic	novelGene_5122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CGTTAAAAAAAAAAAGTCAG	NA	False	NA	NA	False	NA	NA	NA	113564442	113564269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_113564300_113564400
m54284U_201217_021426/180554241/ccs	chr2	+	192	1	Intergenic	novelGene_1056	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAGATTATAGGCTGGC	4371	False	NA	NA	False	NA	NA	NA	127091864	127092056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_127091900_127092100
m54284U_201217_021426/18088600/ccs	chr5	+	172	1	Intergenic	novelGene_2596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAATGAATGT	NA	False	NA	NA	False	NA	NA	NA	66356309	66356481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_66356300_66356500
m54284U_201217_021426/18090538/ccs	chr4	-	155	1	Intergenic	novelGene_2159	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATCTT	5693	False	NA	NA	False	NA	NA	NA	129656770	129656615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129656600_129656800
m54284U_201217_021426/18220680/ccs	chr5	-	188	1	Intergenic	novelGene_2710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTGTGTTCAAAGCCAGC	9352	False	NA	NA	False	NA	NA	NA	104063563	104063375	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_104063400_104063600
m54284U_201217_021426/18220878/ccs	chr1	-	5153	1	Antisense	novelGene_ENSMUSG00000042207.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAGCACTGCTCTATCC	8590	False	NA	NA	False	NA	NA	NA	134541085	134535932	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_134535900_134541100
m54284U_201217_021426/18221177/ccs	chr14	-	155	1	Intergenic	novelGene_7426	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATACAATAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	48956063	48955908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_48955900_48956100
m54284U_201217_021426/18221605/ccs	chr13	-	157	1	Intergenic	novelGene_7095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	55380442	55380285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55380300_55380400
m54284U_201217_021426/18287205/ccs	chr2	+	164	1	Intergenic	novelGene_740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAATAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	33822239	33822403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_33822200_33822400
m54284U_201217_021426/18351995/ccs	chr13	+	183	1	Intergenic	novelGene_7239	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAGTTTACACTGTA	NA	False	NA	NA	False	NA	NA	NA	93751466	93751649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_93751500_93751600
m54284U_201217_021426/1836519/ccs	chr6	-	199	1	Intergenic	novelGene_3441	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACTATGAAACTGAAGAA	1740	False	NA	NA	False	NA	NA	NA	117935951	117935752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_117935800_117936000
m54284U_201217_021426/1836985/ccs	chr9	-	180	1	Intergenic	novelGene_4929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAGAGGGAGAGGAAG	NA	False	NA	NA	False	NA	NA	NA	72430217	72430037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72430000_72430200
m54284U_201217_021426/18417319/ccs	chr4	-	192	1	Intergenic	novelGene_2027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACCTTATCCTTTTCTAC	9625	False	NA	NA	False	NA	NA	NA	116602438	116602246	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116602200_116602400
m54284U_201217_021426/18677797/ccs	chr17	-	177	1	Intergenic	novelGene_8770	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAGAGGAAGT	NA	False	NA	NA	False	NA	NA	NA	85655798	85655621	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_85655600_85655800
m54284U_201217_021426/18678221/ccs	chr18	+	156	1	Intergenic	novelGene_8956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATCTGAATGTTTG	NA	False	NA	NA	False	NA	NA	NA	50155084	50155240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_50155100_50155200
m54284U_201217_021426/18679868/ccs	chr1	-	180	1	Intergenic	novelGene_119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAAAAAAAAGAGAGTCT	NA	False	NA	NA	False	NA	NA	NA	52201549	52201369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_52201400_52201500
m54284U_201217_021426/18680112/ccs	chr16	+	177	1	Intergenic	novelGene_8211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGGTTTTGTTTTGAG	NA	False	NA	NA	False	NA	NA	NA	32141961	32142138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_32142000_32142100
m54284U_201217_021426/18942026/ccs	chr13	+	3354	1	Antisense	novelGene_ENSMUSG00000006191.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCATCTAGCCACTTTT	NA	False	NA	NA	False	NA	NA	NA	30035676	30039030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_+_30035700_30039000
m54284U_201217_021426/18942557/ccs	chr4	-	184	1	Intergenic	novelGene_2408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCATGCCTCTTTCTCCTG	4190	False	NA	NA	False	NA	NA	NA	152173866	152173682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_152173700_152173900
m54284U_201217_021426/19006417/ccs	chr7	-	158	1	Intergenic	novelGene_3893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATAAATATTTG	1545	False	NA	NA	False	NA	NA	NA	73309405	73309247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_73309200_73309400
m54284U_201217_021426/1901526/ccs	chr1	+	201	1	Intergenic	novelGene_503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAACATCCTCAGCT	NA	False	NA	NA	False	NA	NA	NA	179333325	179333526	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_179333300_179333500
m54284U_201217_021426/1902749/ccs	chr13	+	176	1	Intergenic	novelGene_7202	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAATAATGTGATT	NA	False	NA	NA	False	NA	NA	NA	73748575	73748751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_73748600_73748800
m54284U_201217_021426/1903102/ccs	chr14	-	185	1	Intergenic	novelGene_7542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTTATGTATGCTGG	3079	False	NA	NA	False	NA	NA	NA	76047126	76046941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_76046900_76047100
m54284U_201217_021426/19071250/ccs	chr13	+	190	1	Intergenic	novelGene_7326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGACCAGACAGCTGACC	NA	False	NA	NA	False	NA	NA	NA	119402067	119402257	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_119402100_119402300
m54284U_201217_021426/19139290/ccs	chr3	-	165	1	Intergenic	novelGene_1463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAATAAATCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	86210363	86210198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_86210200_86210400
m54284U_201217_021426/19268154/ccs	chr12	-	186	1	Intergenic	novelGene_6806	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAACTCATGGTTATG	NA	False	NA	NA	False	NA	NA	NA	85039903	85039717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85039700_85039900
m54284U_201217_021426/19269508/ccs	chr13	-	201	1	Intergenic	novelGene_7054	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTTCCTCCATGAAAACA	NA	False	NA	NA	False	NA	NA	NA	47212034	47211833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_47211800_47212000
m54284U_201217_021426/19333169/ccs	chr9	-	205	1	Intergenic	novelGene_4950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	533	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGTGAGATCGCTTGT	NA	False	NA	NA	False	NA	NA	NA	75348270	75348065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_75348100_75348300
m54284U_201217_021426/19333455/ccs	chr17	-	202	1	Intergenic	novelGene_8420	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGAAAGCCCTCC	1179	False	NA	NA	False	TTTAAA	-8	NA	24996687	24996485	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24996500_24996700
m54284U_201217_021426/19400578/ccs	chr11	+	235	1	ISM	ENSMUSG00000040483.16	ENSMUST00000146233.8	2597	6	10368	1501	10333	151	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTCCAGTGAGGATGGC	NA	False	NA	NA	False	TTTAAA	-11	NA	72202823	72203058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_+_72202800_72203100
m54284U_201217_021426/19531367/ccs	chr1	-	191	1	Intergenic	novelGene_400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTGGATAGAGAAACTTA	NA	False	NA	NA	False	NA	NA	NA	155897433	155897242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_155897200_155897400
m54284U_201217_021426/19595554/ccs	chr11	-	226	1	Intergenic	novelGene_6065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCATATTTAAACACAGT	9955	False	NA	NA	False	NA	NA	NA	78150964	78150738	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_78150700_78151000
m54284U_201217_021426/1966450/ccs	chr2	+	379	1	Intergenic	novelGene_1032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAATTAAACAACCAA	1500	False	NA	NA	False	NA	NA	NA	121720007	121720386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_121720000_121720400
m54284U_201217_021426/1968354/ccs	chr9	-	151	1	Intergenic	novelGene_5009	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAAATCTTTGGGCC	NA	False	NA	NA	False	NA	NA	NA	96081179	96081028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_96081000_96081200
m54284U_201217_021426/19792121/ccs	chr1	-	160	1	Intergenic	novelGene_320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAATATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	133077662	133077502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_133077500_133077700
m54284U_201217_021426/19858372/ccs	chr12	-	156	1	Intergenic	novelGene_6726	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAAAATTTTAC	NA	False	NA	NA	False	NA	NA	NA	75819206	75819050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_75819000_75819200
m54284U_201217_021426/19858860/ccs	chr7	+	156	1	Intergenic	novelGene_3960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGTAAATTTAAA	NA	False	NA	NA	False	NA	NA	NA	97854082	97854238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_97854100_97854200
m54284U_201217_021426/19925407/ccs	chr16	-	186	1	Intergenic	novelGene_8305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGACATCCTGAGTT	NA	False	NA	NA	False	NA	NA	NA	86719068	86718882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_86718900_86719100
m54284U_201217_021426/20054184/ccs	chr9	-	196	1	Intergenic	novelGene_4842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAATAAGCCCTTTCT	NA	False	NA	NA	False	NA	NA	NA	62306218	62306022	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_62306000_62306200
m54284U_201217_021426/20120527/ccs	chr18	-	176	1	Intergenic	novelGene_8877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAGAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	35031655	35031479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35031500_35031700
m54284U_201217_021426/20185137/ccs	chr15	-	200	1	Intergenic	novelGene_7852	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGCTTCAGACTCATG	NA	False	NA	NA	False	NA	NA	NA	81778052	81777852	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81777900_81778100
m54284U_201217_021426/20187426/ccs	chr5	-	206	1	Intergenic	novelGene_2921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCCTAAGACTTGGG	NA	False	NA	NA	False	AATAAA	-10	NA	125509555	125509349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125509300_125509600
m54284U_201217_021426/20251446/ccs	chr11	+	102	1	Intergenic	novelGene_6206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAACATATGGTGAGAGCT	NA	False	NA	NA	False	NA	NA	NA	93854176	93854278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_93854200_93854300
m54284U_201217_021426/20252244/ccs	chr2	+	203	1	Intergenic	novelGene_678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTATATAGGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	30059931	30060134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_30059900_30060100
m54284U_201217_021426/20253052/ccs	chr17	+	2569	1	Intergenic	novelGene_8792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	94992724	94995293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_94992700_94995300
m54284U_201217_021426/20318745/ccs	chr19	+	181	1	Intergenic	novelGene_9210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAAGAGTCTCACA	NA	False	NA	NA	False	NA	NA	NA	31219421	31219602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_31219400_31219600
m54284U_201217_021426/2032960/ccs	chr13	-	3037	1	Intergenic	novelGene_7067	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAGAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	51254786	51251749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_51251700_51254800
m54284U_201217_021426/2033904/ccs	chr6	+	180	1	Intergenic	novelGene_3383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATACTAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	88327546	88327726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_88327500_88327700
m54284U_201217_021426/20382016/ccs	chr7	-	6305	1	FSM	ENSMUSG00000099579.2	ENSMUST00000191038.2	546	1	-501	-5258	-501	5258	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCAAAAAACTACCCAATGA	9354	False	NA	NA	False	NA	NA	NA	127204118	127197813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_127197800_127204100
m54284U_201217_021426/20382740/ccs	chr12	+	183	1	Intergenic	novelGene_6865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTGTTGAGGGACTTT	NA	False	NA	NA	False	AAAAAG	-6	NA	104923235	104923418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_104923200_104923400
m54284U_201217_021426/20383466/ccs	chr2	-	179	1	Intergenic	novelGene_1140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGTTACAACACCTGG	NA	False	NA	NA	False	NA	NA	NA	154255291	154255112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_154255100_154255300
m54284U_201217_021426/20384431/ccs	chr8	-	176	1	Intergenic	novelGene_4234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATAAATTTTTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	25705011	25704835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_25704800_25705000
m54284U_201217_021426/20384491/ccs	chr7	-	197	1	Intergenic	novelGene_3708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACAGGTGCTCAACAAG	9934	False	NA	NA	False	NA	NA	NA	24859809	24859612	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_24859600_24859800
m54284U_201217_021426/20448100/ccs	chr10	-	192	1	Intergenic	novelGene_5392	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAATGTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70691470	70691278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_70691300_70691500
m54284U_201217_021426/20448653/ccs	chr9	-	185	1	Intergenic	novelGene_4890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAGGAAGGAAACTT	NA	False	NA	NA	False	NA	NA	NA	65803388	65803203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65803200_65803400
m54284U_201217_021426/20449834/ccs	chr4	-	2771	9	NIC	ENSMUSG00000032870.9	novel	2905	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	71.7207039494176	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCGGCTGTCACTGTG	NA	False	NA	-2	True	AATAAA	-21	NA	120874444	120825513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120873945
m54284U_201217_021426/20578460/ccs	chr12	+	159	1	Intergenic	novelGene_6741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAACAAACAAATAAATA	8451	False	NA	NA	False	NA	NA	NA	77186198	77186357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_77186200_77186400
m54284U_201217_021426/20580879/ccs	chr4	-	197	1	Intergenic	novelGene_2104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGGAGAAGAAAGCCAG	NA	False	NA	NA	False	NA	NA	NA	124795052	124794855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_124794900_124795100
m54284U_201217_021426/20580906/ccs	chr1	+	99	1	Intergenic	novelGene_268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAATAATAATAATAAAA	NA	False	NA	NA	False	NA	NA	NA	112153684	112153783	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_112153700_112153800
m54284U_201217_021426/20644405/ccs	chr1	-	210	1	Intergenic	novelGene_437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGACACAGTGAATTACAG	NA	False	NA	NA	False	NA	NA	NA	161717245	161717035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_161717000_161717200
m54284U_201217_021426/20645679/ccs	chr2	+	183	1	Intergenic	novelGene_810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTGAAGAGGACTAGAG	NA	False	NA	NA	False	NA	NA	NA	60027809	60027992	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_60027800_60028000
m54284U_201217_021426/20775239/ccs	chr11	-	198	1	Intergenic	novelGene_6446	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGCATGGAATTGATACAG	NA	False	NA	NA	False	NA	NA	NA	114801201	114801003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_114801000_114801200
m54284U_201217_021426/20908132/ccs	chr7	+	276	1	Intergenic	novelGene_3643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCAATTGCAACAGCAT	1828	False	NA	NA	False	NA	NA	NA	6978918	6979194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_6978900_6979200
m54284U_201217_021426/20973286/ccs	chr11	-	191	1	Intergenic	novelGene_6433	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAAAGATTTACTTT	NA	False	NA	NA	False	NA	NA	NA	113471276	113471085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_113471100_113471300
m54284U_201217_021426/2098634/ccs	chr13	-	904	1	Intergenic	novelGene_7018	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	36018444	36017540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_36017500_36018400
m54284U_201217_021426/21039120/ccs	chrX	-	199	1	Intergenic	novelGene_9500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACAAAAGAAAATCAGAACA	NA	False	NA	NA	False	NA	NA	NA	72975217	72975018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_72975000_72975200
m54284U_201217_021426/21039430/ccs	chr9	-	182	1	Intergenic	novelGene_4851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	62921915	62921733	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_62921700_62921900
m54284U_201217_021426/21039847/ccs	chr6	-	246	1	Intergenic	novelGene_3588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCAGAGGTGGTTGAG	NA	False	NA	NA	False	AAAAAG	-37	NA	148882471	148882225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_148882200_148882500
m54284U_201217_021426/21104221/ccs	chr17	-	172	1	Intergenic	novelGene_8436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTGAAAAAAATTAGTACA	2360	False	NA	NA	False	NA	NA	NA	26937188	26937016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26937000_26937200
m54284U_201217_021426/21104566/ccs	chr10	-	2578	1	Genic_Genomic	ENSMUSG00000047712.9	novel	NA	NA	NA	NA	94913	4	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCTTTTTTAACGTGT	NA	False	NA	NA	False	ATTAAA	-18	NA	8083093	8080515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_-_8080500_8083100
m54284U_201217_021426/21105009/ccs	chr2	-	192	1	Intergenic	novelGene_681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAAGCTCTGGTAGTGTG	9015	False	NA	NA	False	NA	NA	NA	30122047	30121855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_30121900_30122000
m54284U_201217_021426/21168395/ccs	chr11	+	176	1	Intergenic	novelGene_5782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGATTTATTTACT	NA	False	NA	NA	False	NA	NA	NA	43560670	43560846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_43560700_43560800
m54284U_201217_021426/21168991/ccs	chr2	-	188	1	Intergenic	novelGene_774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAAATGCTTATATAGCC	NA	False	NA	NA	False	NA	NA	NA	38678632	38678444	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_38678400_38678600
m54284U_201217_021426/21235733/ccs	chr9	-	203	2	Antisense	novelGene_ENSMUSG00000042487.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	404	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGTGAGATCGCTTGT	NA	False	NA	NA	False	NA	NA	NA	75358390	75348065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_75348220_75358341
m54284U_201217_021426/21299320/ccs	chr8	-	164	1	Intergenic	novelGene_4286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTTTGAAAAAAAAAAAG	3649	False	NA	NA	False	NA	NA	NA	46761411	46761247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_46761200_46761400
m54284U_201217_021426/21299567/ccs	chr8	-	172	1	Intergenic	novelGene_4209	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCGGAGCAAAGGTCCTGAA	NA	False	NA	-1	True	NA	NA	NA	13268620	13268448	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_13268400_13268600
m54284U_201217_021426/21300260/ccs	chrX	-	276	1	Intergenic	novelGene_9625	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACATGGTGATGGAGCTG	NA	False	NA	NA	False	NA	NA	NA	129067986	129067710	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_129067700_129068000
m54284U_201217_021426/21366150/ccs	chr1	-	176	1	Intergenic	novelGene_96	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAGGAAGAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	38948504	38948328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_38948300_38948500
m54284U_201217_021426/21366438/ccs	chr8	-	2081	1	Antisense	novelGene_ENSMUSG00000052566.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAACAAACAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	85717520	85715439	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr8_-_85715400_85717500
m54284U_201217_021426/21366482/ccs	chr17	-	189	1	Intergenic	novelGene_8411	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGAGACTCAAGGCAGT	NA	False	NA	NA	False	NA	NA	NA	24616970	24616781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24616800_24617000
m54284U_201217_021426/21561527/ccs	chr14	-	1478	1	Intergenic	novelGene_7387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCAGATATGGTGGTG	NA	False	NA	NA	False	NA	NA	NA	32052604	32051126	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_32051100_32052600
m54284U_201217_021426/2162691/ccs	chr2	-	200	1	Intergenic	novelGene_866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACAACCGTGAAATGCGT	NA	False	NA	NA	False	AAGAAA	-4	NA	74069616	74069416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_74069400_74069600
m54284U_201217_021426/21627825/ccs	chr6	+	186	1	Intergenic	novelGene_3147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAGACTGTACAGAACT	NA	False	NA	NA	False	NA	NA	NA	30045008	30045194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_30045000_30045200
m54284U_201217_021426/2163616/ccs	chr5	-	205	1	Intergenic	novelGene_2877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAATTCCCCAAACCC	NA	False	NA	NA	False	NA	NA	NA	123199581	123199376	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_123199400_123199600
m54284U_201217_021426/21758733/ccs	chrX	+	174	1	Intergenic	novelGene_9538	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	93188408	93188582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_93188400_93188600
m54284U_201217_021426/21759005/ccs	chr2	+	193	1	Intergenic	novelGene_1256	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGCCTTGGTCATGGTG	NA	False	NA	NA	False	NA	NA	NA	167981860	167982053	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_167981900_167982100
m54284U_201217_021426/21760515/ccs	chr2	+	172	1	Intergenic	novelGene_1241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGTTTTGTTTTGTTTT	919	False	NA	NA	False	NA	NA	NA	166827989	166828161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_166828000_166828200
m54284U_201217_021426/21889127/ccs	chr13	+	174	1	Intergenic	novelGene_7118	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAAAAAAAGATTTTC	8064	False	NA	NA	False	NA	NA	NA	56622328	56622502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_56622300_56622500
m54284U_201217_021426/21890461/ccs	chr7	+	176	1	Intergenic	novelGene_3792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAATTATATTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	34968387	34968563	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_34968400_34968600
m54284U_201217_021426/21891731/ccs	chr3	+	197	1	Intergenic	novelGene_1394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTCACAGTTGGACTTA	NA	False	NA	NA	False	NA	NA	NA	51287986	51288183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_51288000_51288200
m54284U_201217_021426/21957450/ccs	chr13	+	208	1	Intergenic	novelGene_7091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAATAAATAAATA	2861	False	NA	NA	False	NA	NA	NA	55293131	55293339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55293100_55293300
m54284U_201217_021426/22021332/ccs	chr16	-	157	1	Intergenic	novelGene_8190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	31262208	31262051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31262100_31262200
m54284U_201217_021426/22022232/ccs	chr4	-	197	1	Intergenic	novelGene_2092	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTAGGGCCCAGCTCATT	5786	False	NA	NA	False	NA	NA	NA	123712417	123712220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_123712200_123712400
m54284U_201217_021426/22022306/ccs	chr2	-	183	1	Intergenic	novelGene_1043	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAACAGTCCCAGAAA	NA	False	NA	NA	False	NA	NA	NA	124908389	124908206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_124908200_124908400
m54284U_201217_021426/22022346/ccs	chr15	-	152	1	Intergenic	novelGene_7794	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3596	False	NA	NA	False	NA	NA	NA	77254074	77253922	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_77253900_77254100
m54284U_201217_021426/22022826/ccs	chr14	-	176	1	Intergenic	novelGene_7338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAAATCCCAATTC	NA	False	NA	NA	False	NA	NA	NA	14163023	14162847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_14162800_14163000
m54284U_201217_021426/22217371/ccs	chr18	-	187	1	Intergenic	novelGene_8992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCCAAGGCTTCTATG	2781	False	NA	NA	False	NA	NA	NA	65795705	65795518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_65795500_65795700
m54284U_201217_021426/22219096/ccs	chr11	+	171	1	Intergenic	novelGene_6393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTGGTTT	NA	False	NA	NA	False	NA	NA	NA	106631652	106631823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106631700_106631800
m54284U_201217_021426/2229235/ccs	chr7	-	192	1	Intergenic	novelGene_3741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCCATTTCTACATTAAA	NA	False	NA	NA	False	NA	NA	NA	28189312	28189120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28189100_28189300
m54284U_201217_021426/22350035/ccs	chr1	+	213	1	Intergenic	novelGene_560	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCACAATCCTATACTA	NA	False	NA	NA	False	NA	NA	NA	192936428	192936641	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_192936400_192936600
m54284U_201217_021426/22414616/ccs	chr6	+	4037	23	NIC	ENSMUSG00000030058.18	novel	4140	24	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	197.272983870801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATACTCAAAGAAACC	NA	False	NA	1	True	AATAAA	-21	NA	87864909	87889512	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
m54284U_201217_021426/22479194/ccs	chr11	-	183	1	Intergenic	novelGene_6071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACACACAAAGAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	78596434	78596251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_78596300_78596400
m54284U_201217_021426/22547190/ccs	chr11	-	184	1	Intergenic	novelGene_5892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACCCATCTTAAAAACA	NA	False	NA	NA	False	NA	NA	NA	60939124	60938940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_60938900_60939100
m54284U_201217_021426/22610272/ccs	chr10	-	196	1	Intergenic	novelGene_5403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATACTTCAAATGAAAG	NA	False	NA	NA	False	NA	NA	NA	75033248	75033052	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75033100_75033200
m54284U_201217_021426/22675486/ccs	chr3	+	210	1	Intergenic	novelGene_1384	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTACGCATGAATATGGAA	NA	False	NA	NA	False	NA	NA	NA	34843551	34843761	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_34843600_34843800
m54284U_201217_021426/22677177/ccs	chr8	+	203	1	Intergenic	novelGene_4504	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACAGGAGAAGCCAGGCG	NA	False	NA	NA	False	NA	NA	NA	111990380	111990583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111990400_111990600
m54284U_201217_021426/22677644/ccs	chr19	+	192	1	Intergenic	novelGene_9224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGATGTTGGATCACAGCA	NA	False	NA	NA	False	NA	NA	NA	33591947	33592139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_33591900_33592100
m54284U_201217_021426/22872210/ccs	chr10	-	161	1	Intergenic	novelGene_5480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAATAATTTTTA	9804	False	NA	NA	False	NA	NA	NA	84388857	84388696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_84388700_84388900
m54284U_201217_021426/22874352/ccs	chr3	-	171	1	Intergenic	novelGene_1540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCCAGAGCAAGTGGGGTG	NA	False	NA	NA	False	NA	NA	NA	90349337	90349166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90349200_90349300
m54284U_201217_021426/22874691/ccs	chr11	-	1694	1	NIC	ENSMUSG00000020734.14	novel	4279	13	NA	NA	14567	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCTAGCTGCCTCAC	NA	False	NA	NA	False	ATTAAA	-19	NA	115141688	115139994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_115140000_115141700
m54284U_201217_021426/22938537/ccs	chr6	-	185	1	Intergenic	novelGene_3436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAGAAAGACAGAAACGCC	NA	False	NA	NA	False	NA	NA	NA	116200599	116200414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_116200400_116200600
m54284U_201217_021426/22940304/ccs	chr11	-	132	1	Intergenic	novelGene_6126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAATCA	1515	False	NA	NA	False	NA	NA	NA	83190679	83190547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_83190500_83190700
m54284U_201217_021426/2295162/ccs	chr1	-	183	1	Intergenic	novelGene_408	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATAAAATGC	NA	False	NA	NA	False	NA	NA	NA	156385764	156385581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_156385600_156385800
m54284U_201217_021426/2295396/ccs	chr1	+	197	1	Intergenic	novelGene_456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCACCTGCCTCTGCC	NA	False	NA	NA	False	NA	NA	NA	167107376	167107573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_167107400_167107600
m54284U_201217_021426/2296175/ccs	chr11	-	3828	1	NIC	ENSMUSG00000085379.2	novel	3201	2	NA	NA	0	-8475	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCTGGGTTATCATT	NA	False	NA	NA	False	NA	NA	NA	58868876	58865048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_58865000_58868900
m54284U_201217_021426/23004547/ccs	chr15	-	176	1	Intergenic	novelGene_7899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAAAAGCCGGT	NA	False	NA	NA	False	NA	NA	NA	88604790	88604614	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_88604600_88604800
m54284U_201217_021426/23070215/ccs	chr7	+	173	1	Intergenic	novelGene_3654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATGCTAATGGAAA	NA	False	NA	NA	False	NA	NA	NA	12693882	12694055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_12693900_12694100
m54284U_201217_021426/23071253/ccs	chrM	+	254	1	FSM	ENSMUSG00000064360.1	ENSMUST00000082411.1	348	1	94	0	94	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGTAATTAGTTTAAAAAA	92	False	NA	NA	False	AAAAAG	-21	NA	9552	9806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_9600_9800
m54284U_201217_021426/23134334/ccs	chr4	-	198	1	Intergenic	novelGene_2311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTAGTCACGCCGGGCG	9527	False	NA	NA	False	NA	NA	NA	141415052	141414854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_141414900_141415100
m54284U_201217_021426/23200885/ccs	chr10	+	352	1	Intergenic	novelGene_5496	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAGGAAATTGCCACAC	NA	False	NA	NA	False	AGTAAA	-41	NA	89714111	89714463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_89714100_89714500
m54284U_201217_021426/23202293/ccs	chr15	+	172	1	Intergenic	novelGene_7632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTAAGAAAAGAAAT	8099	False	NA	NA	False	NA	NA	NA	9148703	9148875	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_9148700_9148900
m54284U_201217_021426/23202650/ccs	chr19	-	178	1	Intergenic	novelGene_9342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTAATTAATTAATTAAT	NA	False	NA	NA	False	NA	NA	NA	53632752	53632574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_53632600_53632800
m54284U_201217_021426/23332458/ccs	chr13	+	385	1	FSM	ENSMUSG00000074800.5	ENSMUST00000099371.5	276	1	-31	-78	-31	78	mono-exon	FALSE	NA	NA	NA	NA	NA	1270	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCAGGAAATGACTAAT	3132	False	NA	NA	False	AATAAA	-38	NA	75792983	75793368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_75793000_75793400
m54284U_201217_021426/23333268/ccs	chr16	+	108	1	Intergenic	novelGene_8258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAATAAAATTCTACACCT	NA	False	NA	NA	False	NA	NA	NA	42507424	42507532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_42507400_42507500
m54284U_201217_021426/23396805/ccs	chr3	-	169	1	Intergenic	novelGene_1592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGCATTTGTAATTA	NA	False	NA	NA	False	NA	NA	NA	98147690	98147521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_98147500_98147700
m54284U_201217_021426/23397093/ccs	chr9	-	189	1	Intergenic	novelGene_5004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAATTAAAAAGCTAC	NA	False	NA	NA	False	NA	NA	NA	95896665	95896476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_95896500_95896700
m54284U_201217_021426/23398896/ccs	chr15	-	194	1	Intergenic	novelGene_7815	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCCCTTCTGCAGAAGA	NA	False	NA	NA	False	NA	NA	NA	79555843	79555649	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_79555600_79555800
m54284U_201217_021426/23528589/ccs	chr17	+	202	1	Intergenic	novelGene_8486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTATATTTCCACCAC	333	False	NA	NA	False	NA	NA	NA	29370944	29371146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_29370900_29371100
m54284U_201217_021426/23593022/ccs	chr11	-	208	1	Intergenic	novelGene_6326	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTACAAACTCATGAGCTA	3761	False	NA	NA	False	NA	NA	NA	100878398	100878190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_100878200_100878400
m54284U_201217_021426/2360661/ccs	chr1	+	184	1	Intergenic	novelGene_275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACCAGGAGTGGTGATG	NA	False	NA	NA	False	NA	NA	NA	118560331	118560515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_118560300_118560500
m54284U_201217_021426/23791553/ccs	chr2	-	191	1	Intergenic	novelGene_918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTGGAAAGATCTAAC	NA	False	NA	NA	False	NA	NA	NA	90661664	90661473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_90661500_90661700
m54284U_201217_021426/23856393/ccs	chr4	-	179	1	Intergenic	novelGene_1951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGATAATCATTAAC	NA	False	NA	NA	False	NA	NA	NA	99742469	99742290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_99742300_99742500
m54284U_201217_021426/23921144/ccs	chr11	-	179	1	Intergenic	novelGene_6246	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTCAGTAAGAGTAAGTA	661	False	NA	NA	False	NA	NA	NA	95969314	95969135	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95969100_95969300
m54284U_201217_021426/23922381/ccs	chr7	-	186	1	Intergenic	novelGene_3830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTACTGTTGACATGGTG	NA	False	NA	NA	False	NA	NA	NA	44216787	44216601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_44216600_44216800
m54284U_201217_021426/24052777/ccs	chr17	-	191	1	Intergenic	novelGene_8643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTGTCCACAGACTTCA	NA	False	NA	NA	False	NA	NA	NA	52191110	52190919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_52190900_52191100
m54284U_201217_021426/24054343/ccs	chr8	-	226	1	Intergenic	novelGene_4598	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTGAAACAGGGTCTC	NA	False	NA	NA	False	ATTAAA	-30	NA	124801410	124801184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124801200_124801400
m54284U_201217_021426/24117767/ccs	chr4	-	167	1	Intergenic	novelGene_1977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTAAAAATGAGATTT	NA	False	NA	NA	False	NA	NA	NA	106763725	106763558	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_106763600_106763700
m54284U_201217_021426/24183814/ccs	chr5	-	128	1	Antisense	novelGene_ENSMUSG00000107288.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAGTGACCTCTCACTGT	9631	False	NA	NA	False	AATAAA	-21	NA	115490847	115490719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr5_-_115490700_115490800
m54284U_201217_021426/24248404/ccs	chr11	+	157	1	Intergenic	novelGene_6274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAGGGAAAGTAAA	NA	False	NA	NA	False	NA	NA	NA	97484298	97484455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97484300_97484500
m54284U_201217_021426/24249265/ccs	chr1	-	9320	29	ISM	ENSMUSG00000040225.16	ENSMUST00000182593.8	9022	34	21643	-1101	-4822	0	3prime_fragment	FALSE	canonical	3	34	junction_25	40.8074591770891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCTTGGAACTTCTAAT	2107	False	NA	NA	False	AATAAA	-16	NA	162546407	162499356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258
m54284U_201217_021426/24250581/ccs	chr12	-	150	1	Intergenic	novelGene_6896	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATAAATAAATTTT	NA	False	NA	NA	False	NA	NA	NA	110610510	110610360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_110610400_110610500
m54284U_201217_021426/24250808/ccs	chr7	-	176	1	Intergenic	novelGene_4093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGATGAAGAAAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	126604492	126604316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_126604300_126604500
m54284U_201217_021426/24313918/ccs	chr14	+	194	1	Intergenic	novelGene_7398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCCAAGGCATGGAAAG	NA	False	NA	NA	False	NA	NA	NA	35786696	35786890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_35786700_35786900
m54284U_201217_021426/24380976/ccs	chr11	-	207	1	Intergenic	novelGene_5744	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGGTTACCACTCTGTGAA	NA	False	NA	NA	False	NA	NA	NA	23557724	23557517	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23557500_23557700
m54284U_201217_021426/24445542/ccs	chr1	-	180	1	Intergenic	novelGene_249	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGACATAACCAGGGC	NA	False	NA	NA	False	NA	NA	NA	93218028	93217848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_93217800_93218000
m54284U_201217_021426/24446692/ccs	chr2	-	247	1	Intergenic	novelGene_922	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGCAGCAGGTAATTAA	NA	False	NA	NA	False	AAAAAG	-41	NA	90794540	90794293	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_90794300_90794500
m54284U_201217_021426/24576251/ccs	chr11	+	187	1	Intergenic	novelGene_5747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTCAGACTTAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	23717601	23717788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_23717600_23717800
m54284U_201217_021426/24707445/ccs	chr2	+	2815	1	FSM	ENSMUSG00000076376.3	ENSMUST00000102421.3	100	1	87	-2802	87	2802	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACTAATACAGTTCTTG	NA	False	NA	NA	False	AATAAA	-26	NA	117015694	117018509	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_117015700_117018500
m54284U_201217_021426/24709983/ccs	chr6	-	177	1	Intergenic	novelGene_3110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	15733809	15733632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_15733600_15733800
m54284U_201217_021426/24772960/ccs	chr4	+	199	1	Intergenic	novelGene_1995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTAAAGACTTGTTTA	7595	False	NA	NA	False	NA	NA	NA	108200675	108200874	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_108200700_108200900
m54284U_201217_021426/24773559/ccs	chr9	-	182	1	Intergenic	novelGene_4635	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	13866724	13866542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_13866500_13866700
m54284U_201217_021426/24774267/ccs	chr10	-	178	1	Intergenic	novelGene_5244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTTAAAAAAAGGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30705787	30705609	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_30705600_30705800
m54284U_201217_021426/24774319/ccs	chr4	-	180	1	Intergenic	novelGene_2120	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTACAAACAAACAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	126655279	126655099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_126655100_126655300
m54284U_201217_021426/24775076/ccs	chr14	+	3285	1	NIC	ENSMUSG00000022010.20	novel	4999	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACGTGTTTCTATATGA	6539	False	NA	28	True	AATAAA	-18	NA	76741917	76745202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_+_76741900_76745200
m54284U_201217_021426/24839186/ccs	chr1	+	6300	27	NNC	ENSMUSG00000042207.18	novel	8714	27	NA	NA	0	1353	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	194.173731152858	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAACCCAGTGGTCTG	6715	False	NA	16	True	ATTAAA	-8	NA	134487908	134560613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr1_+_134488281_134512891_134512970_134515659_134515783_134516518_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
m54284U_201217_021426/2491121/ccs	chr10	-	1136	1	Genic_Genomic	ENSMUSG00000000711.4	novel	NA	NA	NA	NA	-24	-13350	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	128532157	128531021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr10_-_128531000_128532200
m54284U_201217_021426/25103116/ccs	chr11	-	272	1	Intergenic	novelGene_5925	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATGTGTCCTTTGTTAT	NA	False	NA	NA	False	NA	NA	NA	68512379	68512107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68512100_68512400
m54284U_201217_021426/25165950/ccs	chr8	+	158	1	Intergenic	novelGene_4486	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAATAAATCTTTTT	NA	False	NA	NA	False	NA	NA	NA	111328502	111328660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111328500_111328700
m54284U_201217_021426/25168309/ccs	chr7	+	220	1	Intergenic	novelGene_4160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAACAAACTCCCAAG	NA	False	NA	NA	False	NA	NA	NA	140701814	140702034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_140701800_140702000
m54284U_201217_021426/25168690/ccs	chrX	-	193	1	Intergenic	novelGene_9427	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTGTGAGCTTTTGGA	NA	False	NA	NA	False	NA	NA	NA	37581249	37581056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_37581100_37581200
m54284U_201217_021426/25233340/ccs	chr10	+	159	1	Intergenic	novelGene_5512	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGCTTTACAGCATAC	NA	False	NA	NA	False	NA	NA	NA	95173527	95173686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_95173500_95173700
m54284U_201217_021426/25363433/ccs	chr7	-	158	1	Intergenic	novelGene_3706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAAACAAA	NA	False	NA	NA	False	NA	NA	NA	24658885	24658727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_24658700_24658900
m54284U_201217_021426/25363892/ccs	chr8	+	157	1	Intergenic	novelGene_4390	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAATATATGTGAAAG	NA	False	NA	NA	False	NA	NA	NA	87271745	87271902	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_87271700_87271900
m54284U_201217_021426/25427990/ccs	chr15	-	170	1	Intergenic	novelGene_7987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAAACATAGGAGT	NA	False	NA	NA	False	NA	NA	NA	100141863	100141693	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_100141700_100141900
m54284U_201217_021426/25626970/ccs	chr6	-	181	1	Intergenic	novelGene_3275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTACTCATTTTAAGTCT	NA	False	NA	NA	False	NA	NA	NA	52263683	52263502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_52263500_52263700
m54284U_201217_021426/25690298/ccs	chr12	-	184	1	Intergenic	novelGene_6647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAAAGATGTATTTAT	6549	False	NA	NA	False	NA	NA	NA	54916573	54916389	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_54916400_54916600
m54284U_201217_021426/25690611/ccs	chr15	-	292	1	FSM	ENSMUSG00000085442.2	ENSMUST00000148102.2	466	1	250	-76	250	76	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGGAACAAAACACCC	7	True	NA	NA	False	AATATA	-42	NA	37943786	37943494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_37943500_37943800
m54284U_201217_021426/25691802/ccs	chr9	+	180	1	Intergenic	novelGene_4687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAGGAACTTGGA	NA	False	NA	NA	False	NA	NA	NA	30857014	30857194	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_30857000_30857200
m54284U_201217_021426/25691997/ccs	chr1	-	216	1	Intergenic	novelGene_236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCCAGCACTCAGGAGG	NA	False	NA	NA	False	NA	NA	NA	87169602	87169386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_87169400_87169600
m54284U_201217_021426/25757534/ccs	chr12	-	193	1	Intergenic	novelGene_6664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGCAAGCAACAGGGATG	568	False	NA	NA	False	NA	NA	NA	59130718	59130525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_59130500_59130700
m54284U_201217_021426/25887454/ccs	chr16	+	179	1	Intergenic	novelGene_8312	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGCTGAGGAAGACAGCT	NA	False	NA	NA	False	NA	NA	NA	89921167	89921346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_89921200_89921300
m54284U_201217_021426/25887527/ccs	chr4	+	176	1	Intergenic	novelGene_2203	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTGAAAAAAA	2970	False	NA	NA	False	NA	NA	NA	132518795	132518971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132518800_132519000
m54284U_201217_021426/25888465/ccs	chr5	+	180	1	Intergenic	novelGene_2656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAATCTGGTGGACGT	3956	False	NA	NA	False	NA	NA	NA	90550244	90550424	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_90550200_90550400
m54284U_201217_021426/25954816/ccs	chr7	-	189	1	Intergenic	novelGene_4146	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTAGGCAGCCCAGAGCC	NA	False	NA	NA	False	NA	NA	NA	138953849	138953660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_138953700_138953800
m54284U_201217_021426/25954860/ccs	chr2	+	222	1	Intergenic	novelGene_814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACAGTAGCAATATCAAC	NA	False	NA	NA	False	NA	NA	NA	62188540	62188762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_62188500_62188800
m54284U_201217_021426/26018307/ccs	chr4	-	203	1	Intergenic	novelGene_2201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGCACTCTGAAGACC	NA	False	NA	NA	False	NA	NA	NA	132469630	132469427	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_132469400_132469600
m54284U_201217_021426/26020088/ccs	chr3	-	197	1	Intergenic	novelGene_1672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAATGCTGTCTTTTTTCC	4777	False	NA	NA	False	NA	NA	NA	127236017	127235820	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_127235800_127236000
m54284U_201217_021426/26085972/ccs	chr16	-	202	1	Intergenic	novelGene_8035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTACGTCAGTTTGCTGCA	NA	False	NA	NA	False	TTTAAA	-6	NA	4818972	4818770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_4818800_4819000
m54284U_201217_021426/26149209/ccs	chr17	-	187	1	Intergenic	novelGene_8481	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTCACCTCACCTACGA	903	False	NA	NA	False	NA	NA	NA	29263227	29263040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29263000_29263200
m54284U_201217_021426/26151597/ccs	chr4	+	173	1	Intergenic	novelGene_2193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAATAAATAAATCTT	NA	False	NA	NA	False	NA	NA	NA	132246107	132246280	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132246100_132246300
m54284U_201217_021426/26214455/ccs	chr3	-	175	1	Intergenic	novelGene_1587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGCA	9467	False	NA	NA	False	NA	NA	NA	96584685	96584510	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_96584500_96584700
m54284U_201217_021426/2623612/ccs	chr1	-	159	1	Intergenic	novelGene_148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAAAAAAGAACA	NA	False	NA	NA	False	NA	NA	NA	59955936	59955777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59955800_59955900
m54284U_201217_021426/262548/ccs	chr9	-	187	1	Intergenic	novelGene_4813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGATGGGCCATAGGGTA	2920	False	NA	NA	False	NA	NA	NA	58201458	58201271	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58201300_58201500
m54284U_201217_021426/26280843/ccs	chr1	-	186	1	Intergenic	novelGene_562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTAGAAGTCTATATC	NA	False	NA	NA	False	NA	NA	NA	195027900	195027714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_195027700_195027900
m54284U_201217_021426/26346117/ccs	chr7	-	186	1	Intergenic	novelGene_3990	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAACAAAACTAGAATTAA	NA	False	NA	NA	False	NA	NA	NA	101509894	101509708	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_101509700_101509900
m54284U_201217_021426/26347940/ccs	chr4	-	6035	31	NIC	ENSMUSG00000041936.19	novel	7262	38	NA	NA	-4800	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_6	115.99228422615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGACTGTGTTTGTACTT	NA	False	NA	-21	True	AATAAA	-18	NA	156262987	156249746	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254002_156254015_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885
m54284U_201217_021426/26411439/ccs	chr11	+	946	1	Antisense	novelGene_ENSMUSG00000020362.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATCCAGTGTCTTGATC	NA	False	NA	NA	False	ATTAAA	-16	NA	49603015	49603961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_49603000_49604000
m54284U_201217_021426/26413740/ccs	chr12	+	1496	1	NIC	ENSMUSG00000054894.7	novel	1599	6	NA	NA	0	-11521	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACCAAGCTACACAAGT	NA	False	NA	NA	False	NA	NA	NA	69771741	69773237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_69771700_69773200
m54284U_201217_021426/26608286/ccs	chr12	+	189	1	Intergenic	novelGene_6737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAACATTTACAGCTT	NA	False	NA	NA	False	NA	NA	NA	76874790	76874979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_76874800_76875000
m54284U_201217_021426/26609434/ccs	chr17	-	184	1	Intergenic	novelGene_8339	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTCAATGGGAGCCGGGC	NA	False	NA	NA	False	NA	NA	NA	3139820	3139636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_3139600_3139800
m54284U_201217_021426/26674107/ccs	chr17	+	156	1	Intergenic	novelGene_8581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGATGCAGTCATTCTT	NA	False	NA	NA	False	NA	NA	NA	36396888	36397044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_36396900_36397000
m54284U_201217_021426/26739769/ccs	chr15	-	202	1	Intergenic	novelGene_7609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAACATGCCCAATCAAA	NA	False	NA	NA	False	NA	NA	NA	5157800	5157598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_5157600_5157800
m54284U_201217_021426/26740538/ccs	chr5	+	175	1	Intergenic	novelGene_2693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAGATACTAAAGT	NA	False	NA	NA	False	NA	NA	NA	100546221	100546396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_100546200_100546400
m54284U_201217_021426/26740576/ccs	chr11	+	174	1	Intergenic	novelGene_5908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAGAGGAAGAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	62410196	62410370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_62410200_62410400
m54284U_201217_021426/26740970/ccs	chr2	-	165	1	Intergenic	novelGene_603	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAATTCCAGCTTCCTG	NA	False	NA	NA	False	NA	NA	NA	17940259	17940094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_17940100_17940300
m54284U_201217_021426/26805255/ccs	chr11	+	184	1	Intergenic	novelGene_5879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCCAGTCTCATGGGCT	NA	False	NA	NA	False	NA	NA	NA	59912373	59912557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59912400_59912600
m54284U_201217_021426/26806690/ccs	chr17	-	188	1	Intergenic	novelGene_8416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACGTGAGGAAGAACAGCGT	NA	False	NA	NA	False	NA	NA	NA	24753444	24753256	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24753300_24753400
m54284U_201217_021426/26870123/ccs	chrX	+	192	1	Intergenic	novelGene_9470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGGATGCATTGTTAA	NA	False	NA	NA	False	NA	NA	NA	55912447	55912639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_55912400_55912600
m54284U_201217_021426/2688853/ccs	chr11	+	350	1	Intergenic	novelGene_5841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATAAACAAAGTCTGGG	NA	False	NA	NA	False	NA	NA	NA	53752062	53752412	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_53752100_53752400
m54284U_201217_021426/2689653/ccs	chr3	-	4744	1	Antisense	novelGene_ENSMUSG00000045576.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACTAAAAACATAAT	3808	False	NA	NA	False	NA	NA	NA	104790649	104785905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_-_104785900_104790600
m54284U_201217_021426/26935320/ccs	chr3	-	171	1	Intergenic	novelGene_1683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTCTTAA	9983	False	NA	-1	True	NA	NA	NA	129668457	129668286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_129668300_129668500
m54284U_201217_021426/26935977/ccs	chr19	-	174	1	Intergenic	novelGene_9294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAACTTGGGTAAATAGT	NA	False	NA	NA	False	NA	NA	NA	45359265	45359091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45359100_45359300
m54284U_201217_021426/27132938/ccs	chr9	-	2419	1	Genic_Genomic	ENSMUSG00000025234.12	novel	NA	NA	NA	NA	-52	-47628	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGACTTAAAAGTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	59393953	59391534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_-_59391500_59394000
m54284U_201217_021426/27198545/ccs	chr9	-	188	1	Intergenic	novelGene_4644	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTACACTTTACTTCTCC	NA	False	NA	NA	False	NA	NA	NA	19523594	19523406	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_19523400_19523600
m54284U_201217_021426/27263207/ccs	chr1	+	201	1	Intergenic	novelGene_557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACAAAGCATAATTAG	3872	False	NA	NA	False	NA	NA	NA	191343329	191343530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_191343300_191343500
m54284U_201217_021426/27264042/ccs	chr6	+	194	1	Intergenic	novelGene_3237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTAAAGTGTCAGCAAT	NA	False	NA	NA	False	TTTAAA	-5	NA	40421850	40422044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_40421800_40422000
m54284U_201217_021426/27395503/ccs	chr15	+	166	1	Intergenic	novelGene_7811	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAAAAGATTGGAA	253	False	NA	NA	False	NA	NA	NA	79347890	79348056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_79347900_79348100
m54284U_201217_021426/27396340/ccs	chr14	-	1733	1	FSM	ENSMUSG00000057886.6	ENSMUST00000181108.2	552	1	-75	-1106	-75	1106	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACCCTCCCAGAAATGGT	NA	False	NA	NA	False	AATAAA	-42	NA	74193066	74191333	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_-_74191300_74193100
m54284U_201217_021426/2752603/ccs	chr2	+	199	1	Intergenic	novelGene_879	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTATTGCAGTTTCTCACA	NA	False	NA	NA	False	NA	NA	NA	77145967	77146166	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_77146000_77146200
m54284U_201217_021426/27787873/ccs	chr12	+	3848	16	NIC	ENSMUSG00000021012.17	novel	3514	17	NA	NA	0	0	intron_retention	FALSE	canonical	3	86	junction_13	364.948008473658	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGTGTTTAATAATGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	98713222	98754012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
m54284U_201217_021426/27788981/ccs	chrX	+	335	1	Intergenic	novelGene_9584	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAAAGTTGATTAAA	NA	False	NA	NA	False	NA	NA	NA	102315394	102315729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_102315400_102315700
m54284U_201217_021426/27853989/ccs	chr3	-	3106	1	Intergenic	novelGene_1705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTGGCACTCACCTAA	1649	False	NA	NA	False	NA	NA	NA	138492182	138489076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_138489100_138492200
m54284U_201217_021426/27855446/ccs	chr6	-	154	1	Intergenic	novelGene_3535	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAGGAAGAATAGAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	128737138	128736984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128737000_128737100
m54284U_201217_021426/27918930/ccs	chr9	+	4797	1	ISM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	52004	0	6650	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTTTCTTTCTTTAAT	NA	False	NA	9	True	AATAAA	-15	NA	14239600	14244397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_14239600_14244400
m54284U_201217_021426/27918981/ccs	chr1	+	2030	1	Genic_Genomic	ENSMUSG00000067017.6	novel	NA	NA	NA	NA	911	82	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTTTTAAAGTTAAATAC	NA	False	NA	NA	False	AATACA	-31	NA	105384606	105386636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_+_105384600_105386600
m54284U_201217_021426/27920747/ccs	chr17	+	176	1	Intergenic	novelGene_8455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTTAAAAAAAGAAAAGAAA	3265	False	NA	NA	False	NA	NA	NA	28283551	28283727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_28283600_28283700
m54284U_201217_021426/28051896/ccs	chr3	-	172	1	Intergenic	novelGene_1508	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGCTGAGCAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	88920609	88920437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88920400_88920600
m54284U_201217_021426/28117842/ccs	chr17	-	169	1	Intergenic	novelGene_8531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAAAGTACTAGCT	NA	False	NA	NA	False	NA	NA	NA	33621013	33620844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_33620800_33621000
m54284U_201217_021426/28180947/ccs	chr1	+	207	1	Intergenic	novelGene_515	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTAAGTACTGGTGGCAC	5330	False	NA	NA	False	NA	NA	NA	180646682	180646889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_180646700_180646900
m54284U_201217_021426/28182822/ccs	chr6	-	2969	19	NIC	ENSMUSG00000038429.11	novel	3076	20	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_18	205.119086157707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTTCAGTTCTTTGGGG	7905	False	NA	-8	True	AATAAA	-15	NA	124806398	124791981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124806247
m54284U_201217_021426/28247979/ccs	chr16	-	235	1	ISM	ENSMUSG00000022788.17	ENSMUST00000162045.8	3171	11	107258	0	51269	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	16270817	16270582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr16_-_16270600_16270800
m54284U_201217_021426/28311593/ccs	chr11	-	185	1	Intergenic	novelGene_6079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAGCACTCGGGAG	NA	False	NA	NA	False	NA	NA	NA	79189097	79188912	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79188900_79189100
m54284U_201217_021426/28313910/ccs	chr9	+	171	1	Intergenic	novelGene_5046	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAATGCTGTCTCTTTC	NA	False	NA	NA	False	NA	NA	NA	102675231	102675402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102675200_102675400
m54284U_201217_021426/28378672/ccs	chr18	-	228	1	Intergenic	novelGene_8881	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTCACTCTGTAGACAAG	NA	False	NA	NA	False	NA	NA	NA	35183041	35182813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35182800_35183000
m54284U_201217_021426/28443743/ccs	chr2	-	200	1	Intergenic	novelGene_955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	610	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTTTTATTAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	98848442	98848242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_98848200_98848400
m54284U_201217_021426/28640868/ccs	chr11	-	181	1	Intergenic	novelGene_5865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTAGTCAGATACCT	NA	False	NA	NA	False	NA	NA	NA	58039661	58039480	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_58039500_58039700
m54284U_201217_021426/28705241/ccs	chr6	-	185	1	Intergenic	novelGene_3218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTACAATTCAAATGT	NA	False	NA	NA	False	NA	NA	NA	39277558	39277373	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39277400_39277600
m54284U_201217_021426/28771372/ccs	chr11	-	198	1	Intergenic	novelGene_6164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTTCTCTATACACC	7333	False	NA	NA	False	NA	NA	NA	87027076	87026878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_87026900_87027100
m54284U_201217_021426/28772559/ccs	chr17	-	187	1	Intergenic	novelGene_8344	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCTGGACACAATTTTGA	5029	False	NA	NA	False	NA	NA	NA	5212265	5212078	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_5212100_5212300
m54284U_201217_021426/28836725/ccs	chr11	+	261	1	Intergenic	novelGene_6070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATTTATTTAATAAACA	NA	False	NA	NA	False	NA	NA	NA	78465083	78465344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_78465100_78465300
m54284U_201217_021426/2888/ccs	chr4	-	200	1	Intergenic	novelGene_1935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACATGACTAGGAAACCA	NA	False	NA	NA	False	NA	NA	NA	94542061	94541861	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_94541900_94542100
m54284U_201217_021426/28903559/ccs	chr2	-	198	1	Intergenic	novelGene_1112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTCTGAACAGCTCTTAA	NA	False	NA	NA	False	NA	NA	NA	150730773	150730575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_150730600_150730800
m54284U_201217_021426/28968754/ccs	chr16	+	3917	1	Genic_Genomic	ENSMUSG00000022750.19	novel	NA	NA	NA	NA	13168	1971	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGCTTTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	17595124	17599041	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_+_17595100_17599000
m54284U_201217_021426/29032633/ccs	chrX	+	176	1	Intergenic	novelGene_9555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAAGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	100153954	100154130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100154000_100154100
m54284U_201217_021426/29033470/ccs	chr6	-	173	1	Intergenic	novelGene_3207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAATCAATAAAACA	NA	False	NA	NA	False	NA	NA	NA	38443092	38442919	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38442900_38443100
m54284U_201217_021426/29034918/ccs	chr2	+	171	1	Intergenic	novelGene_593	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAAGCTAGAGCTGG	NA	False	NA	NA	False	NA	NA	NA	11311727	11311898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_11311700_11311900
m54284U_201217_021426/29098228/ccs	chr16	-	203	1	Intergenic	novelGene_8294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTTGAGATGGTTGCTC	NA	False	NA	NA	False	NA	NA	NA	64717039	64716836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_64716800_64717000
m54284U_201217_021426/29163724/ccs	chr7	+	185	1	Intergenic	novelGene_3865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAAAATCTAGTGTTG	19	False	NA	NA	False	NA	NA	NA	49517387	49517572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_49517400_49517600
m54284U_201217_021426/29164182/ccs	chr7	-	188	1	Intergenic	novelGene_3685	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGAGTTCAAAGCTGG	4403	False	NA	NA	False	NA	NA	NA	19113977	19113789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_19113800_19114000
m54284U_201217_021426/29166367/ccs	chr1	-	190	1	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACTCAATGTCGACCTTT	NA	False	NA	NA	False	NA	NA	NA	38062078	38061888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_38061900_38062100
m54284U_201217_021426/29230008/ccs	chr10	-	1100	1	ISM	ENSMUSG00000096718.3	ENSMUST00000219144.2	4067	4	26189	1281	6608	-1281	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTATATACTGCCATCC	NA	False	NA	NA	False	AATAAA	-17	NA	81740125	81739025	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr10_-_81739000_81740100
m54284U_201217_021426/29231338/ccs	chr9	+	200	1	Intergenic	novelGene_4789	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTGGCCCTTTAAGTGT	NA	False	NA	NA	False	NA	NA	NA	56810277	56810477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_56810300_56810500
m54284U_201217_021426/29294884/ccs	chr18	-	182	1	Intergenic	novelGene_9014	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATAGACCCATTGATCTA	NA	False	NA	NA	False	NA	NA	NA	74098113	74097931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_74097900_74098100
m54284U_201217_021426/29491834/ccs	chr2	+	152	1	Intergenic	novelGene_1152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAGATTTGAAAA	NA	False	NA	NA	False	NA	NA	NA	154957919	154958071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_154957900_154958100
m54284U_201217_021426/29688479/ccs	chr19	-	3835	31	NNC	ENSMUSG00000025159.9	novel	6607	31	NA	NA	0	336	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	54.2155779171346	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTCTCCACACTGCATC	NA	False	NA	NA	False	AGTAAA	-16	NA	41969596	41932307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938032_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
m54284U_201217_021426/29689124/ccs	chr9	-	336	1	Intergenic	novelGene_4866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAATAAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	64194052	64193716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_64193700_64194100
m54284U_201217_021426/29690588/ccs	chr10	-	171	1	Intergenic	novelGene_5190	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAGTGAAAGAAAATA	NA	False	NA	NA	False	NA	NA	NA	8798937	8798766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_8798800_8798900
m54284U_201217_021426/29690634/ccs	chr11	-	188	1	Intergenic	novelGene_6198	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTAATTTCACTGTCCC	7006	False	NA	NA	False	NA	NA	NA	88870083	88869895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88869900_88870100
m54284U_201217_021426/29753582/ccs	chr12	-	190	1	Intergenic	novelGene_6915	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCTTTTCCAGAGGTCC	1065	False	NA	NA	False	NA	NA	NA	111514667	111514477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111514500_111514700
m54284U_201217_021426/29753877/ccs	chr9	-	3286	8	ISM	ENSMUSG00000059475.14	ENSMUST00000163348.8	2135	9	-4	-901	0	-217	intron_retention	FALSE	canonical	3	10	junction_1	8.75750407085377	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTATGACTTTGCTGC	NA	False	NA	-6	True	NA	NA	NA	20404042	20380220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_20382542_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681
m54284U_201217_021426/30015841/ccs	chr15	-	186	1	Intergenic	novelGene_8002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATATCGAATAATTTTGT	8913	False	NA	NA	False	NA	NA	NA	102243707	102243521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102243500_102243700
m54284U_201217_021426/30015980/ccs	chr17	-	190	1	Intergenic	novelGene_8340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAATTGGAGCTGGAG	2210	False	NA	NA	False	NA	NA	NA	3311989	3311799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_3311800_3312000
m54284U_201217_021426/30016557/ccs	chr14	+	283	1	Intergenic	novelGene_7447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTATAACTGAGCA	NA	False	NA	NA	False	AAGAAA	-44	NA	52507322	52507605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_52507300_52507600
m54284U_201217_021426/30016817/ccs	chr11	+	184	1	Intergenic	novelGene_6398	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATTAAAAAAAAAGGTAGT	NA	False	NA	NA	False	NA	NA	NA	106876480	106876664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106876500_106876700
m54284U_201217_021426/30082462/ccs	chr7	-	172	1	Intergenic	novelGene_3890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATATAAA	NA	False	NA	NA	False	NA	NA	NA	73168249	73168077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_73168100_73168200
m54284U_201217_021426/30146910/ccs	chr17	-	176	1	Intergenic	novelGene_8615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAGTGTAA	NA	False	NA	NA	False	NA	NA	NA	46739199	46739023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_46739000_46739200
m54284U_201217_021426/30149128/ccs	chr8	-	207	1	Intergenic	novelGene_4373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTTTTTTTTTAAA	3218	False	NA	NA	False	NA	NA	NA	85556219	85556012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_85556000_85556200
m54284U_201217_021426/30149260/ccs	chrX	+	234	1	Intergenic	novelGene_9673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGAGCCGCTGAGTATGC	NA	False	NA	NA	False	NA	NA	NA	150958990	150959224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_150959000_150959200
m54284U_201217_021426/30149431/ccs	chr11	-	217	1	Intergenic	novelGene_6457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCAATGTTCTCAGCA	NA	False	NA	NA	False	NA	NA	NA	115450485	115450268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115450300_115450500
m54284U_201217_021426/3015794/ccs	chr5	+	155	1	Intergenic	novelGene_2755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	109953412	109953567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_109953400_109953600
m54284U_201217_021426/3016133/ccs	chrX	-	248	1	Intergenic	novelGene_9624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTCCCTAAAAAATCT	NA	False	NA	NA	False	NA	NA	NA	128876396	128876148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_128876100_128876400
m54284U_201217_021426/30213330/ccs	chr1	+	294	1	FSM	ENSMUSG00000081051.5	ENSMUST00000117288.2	531	1	295	-58	295	58	mono-exon	FALSE	NA	NA	NA	NA	NA	1212	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGATGGAACCAAGACA	NA	False	NA	NA	False	NA	NA	NA	95426640	95426934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_95426600_95426900
m54284U_201217_021426/30278714/ccs	chr2	+	227	1	Intergenic	novelGene_1087	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATCTTGGTTAAGGAGAA	NA	False	NA	NA	False	NA	NA	NA	139947441	139947668	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_139947400_139947700
m54284U_201217_021426/30279714/ccs	chr2	-	5051	3	ISM	ENSMUSG00000003418.12	ENSMUST00000003509.10	7618	8	124786	1806	124015	-1806	3prime_fragment	FALSE	canonical	3	69	junction_1	6	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAAATCTGTTATATCT	NA	False	NA	NA	False	ATTAAA	-13	NA	13674089	13657637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_13662102_13670230_13670324_13673595
m54284U_201217_021426/30410289/ccs	chr9	+	202	1	Intergenic	novelGene_4803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAATTCAAGCT	NA	False	NA	NA	False	NA	NA	NA	57557048	57557250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_57557000_57557200
m54284U_201217_021426/30474249/ccs	chr17	+	165	1	Intergenic	novelGene_8628	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAAATTCTT	8389	False	NA	NA	False	NA	NA	NA	47794123	47794288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_47794100_47794300
m54284U_201217_021426/30540313/ccs	chr11	+	169	1	Intergenic	novelGene_5693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCTACTGAGGTACTGG	2877	False	NA	NA	False	NA	NA	NA	6406751	6406920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_6406800_6406900
m54284U_201217_021426/30540859/ccs	chr10	+	300	1	Intergenic	novelGene_5265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTCCAGCCTCCCTT	NA	False	NA	NA	False	NA	NA	NA	39854541	39854841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_39854500_39854800
m54284U_201217_021426/30607898/ccs	chr5	-	200	1	Intergenic	novelGene_2749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGCTTTCCTAAAC	NA	False	NA	NA	False	NA	NA	NA	108373748	108373548	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_108373500_108373700
m54284U_201217_021426/30737062/ccs	chr13	-	185	1	FSM	ENSMUSG00000021629.11	ENSMUST00000224177.2	4000	1	3555	260	3555	-260	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTCTATTTTCATTTC	NA	False	NA	NA	False	NA	NA	NA	100957502	100957317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_100957300_100957500
m54284U_201217_021426/3080279/ccs	chr10	+	168	1	Intergenic	novelGene_5171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTCTTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3957202	3957370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_3957200_3957400
m54284U_201217_021426/30804457/ccs	chr4	+	195	1	Intergenic	novelGene_1876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTATACTTAGTGCTTTGT	NA	False	NA	NA	False	NA	NA	NA	57806277	57806472	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_57806300_57806500
m54284U_201217_021426/3081012/ccs	chr11	-	181	1	Intergenic	novelGene_6306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAACAGTCGGGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	98751106	98750925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_98750900_98751100
m54284U_201217_021426/3081939/ccs	chr10	-	206	1	Intergenic	novelGene_5289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCCAGGTTACCGTCTGT	NA	False	NA	NA	False	NA	NA	NA	45270405	45270199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_45270200_45270400
m54284U_201217_021426/30868623/ccs	chr3	-	5994	3	NIC	ENSMUSG00000104968.2	novel	580	3	NA	NA	-5293	125	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTCAGCGTTCCTT	NA	False	NA	NA	False	AATAGA	-16	NA	53026125	53017691	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_53018096_53019909_53020151_53020776
m54284U_201217_021426/30869862/ccs	chr2	-	210	1	Intergenic	novelGene_1104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTTTCTTTTTTCTGAT	NA	False	NA	NA	False	NA	NA	NA	146047392	146047182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_146047200_146047400
m54284U_201217_021426/30934183/ccs	chr4	-	163	1	Intergenic	novelGene_1752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGGTGAACTAC	NA	False	NA	NA	False	NA	NA	NA	11560323	11560160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11560200_11560300
m54284U_201217_021426/30934969/ccs	chr5	-	181	1	Intergenic	novelGene_2689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATACATAGAAATCTAAAG	NA	False	NA	NA	False	NA	NA	NA	99865530	99865349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_99865300_99865500
m54284U_201217_021426/31064582/ccs	chr11	-	186	1	Intergenic	novelGene_6122	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGAAACAG	NA	False	NA	NA	False	NA	NA	NA	82719526	82719340	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_82719300_82719500
m54284U_201217_021426/31065463/ccs	chr7	+	170	1	Intergenic	novelGene_4115	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGGCCGGAGGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	128339270	128339440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_128339300_128339400
m54284U_201217_021426/31131580/ccs	chr2	-	189	1	Intergenic	novelGene_705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACCAGAGACATAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	31622533	31622344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31622300_31622500
m54284U_201217_021426/31195826/ccs	chr12	-	1899	5	ISM	ENSMUSG00000049882.11	ENSMUST00000238220.2	1018	6	0	1012	0	-843	5prime_fragment	FALSE	canonical	3	8	junction_4	78.1488963453739	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCTCGGTTTTTAGTC	NA	False	NA	NA	False	CATAAA	-17	NA	69629791	69625467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_-_69626785_69627891_69628012_69629049_69629120_69629304_69629400_69629494
m54284U_201217_021426/31197101/ccs	chr12	-	217	1	Intergenic	novelGene_6698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGAGGCAAAGTTGTAT	NA	False	NA	NA	False	NA	NA	NA	71092716	71092499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71092500_71092700
m54284U_201217_021426/31197586/ccs	chr11	-	181	1	Intergenic	novelGene_6502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGAGAGGAGAGGGCTG	NA	False	NA	NA	False	NA	NA	NA	119919980	119919799	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_119919800_119920000
m54284U_201217_021426/31391848/ccs	chr9	+	226	1	Intergenic	novelGene_4984	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCATCTGTATCATACC	NA	False	NA	NA	False	NA	NA	NA	85628387	85628613	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_85628400_85628600
m54284U_201217_021426/31394038/ccs	chr7	+	194	1	Intergenic	novelGene_4051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGTGAATGGACATG	NA	False	NA	NA	False	NA	NA	NA	117825843	117826037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_117825800_117826000
m54284U_201217_021426/31525425/ccs	chr1	+	190	1	Intergenic	novelGene_373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTCAAGTCTCTGAAAA	NA	False	NA	NA	False	NA	NA	NA	151415354	151415544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_151415400_151415500
m54284U_201217_021426/31590726/ccs	chr1	-	170	1	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATGAGAGCTGT	7704	False	NA	NA	False	NA	NA	NA	13088403	13088233	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_13088200_13088400
m54284U_201217_021426/31655832/ccs	chr2	+	179	1	Intergenic	novelGene_889	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAAAGACCTTTTT	NA	False	NA	NA	False	NA	NA	NA	83483421	83483600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_83483400_83483600
m54284U_201217_021426/31721181/ccs	chr12	-	175	1	Intergenic	novelGene_6752	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAACAAAACAAAACAAG	NA	False	NA	NA	False	NA	NA	NA	80375125	80374950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80375000_80375100
m54284U_201217_021426/31787138/ccs	chr8	+	192	1	Intergenic	novelGene_4359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTTGGAATAGCGCTTT	NA	False	NA	NA	False	NA	NA	NA	81169104	81169296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_81169100_81169300
m54284U_201217_021426/31850877/ccs	chr6	-	202	1	Intergenic	novelGene_3547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGTAATGCTGGTTATC	NA	False	NA	NA	False	NA	NA	NA	134617722	134617520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_134617500_134617700
m54284U_201217_021426/31851095/ccs	chr7	+	169	1	Intergenic	novelGene_3963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAAGAATCTTTTTTTT	NA	False	NA	10	True	NA	NA	NA	98439098	98439267	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_98439100_98439300
m54284U_201217_021426/31852542/ccs	chr8	-	192	1	Intergenic	novelGene_4492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTCATGGTCATTCTCA	9429	False	NA	NA	False	NA	NA	NA	111680158	111679966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_111680000_111680200
m54284U_201217_021426/31984124/ccs	chr11	-	176	1	Intergenic	novelGene_6416	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTATATAAATTAGAGC	6352	False	NA	NA	False	NA	NA	NA	107331532	107331356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107331400_107331500
m54284U_201217_021426/32179082/ccs	chr9	+	3419	17	NNC	ENSMUSG00000009741.16	novel	3850	17	NA	NA	191	0	intron_retention	FALSE	canonical	2	15	junction_5	121.699537155036	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATTTTGAATTCATTAT	1493	False	NA	17	True	AATAAA	-18	NA	113760192	113806069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr9_+_113760288_113760644_113760835_113773915_113774068_113780675_113780753_113785030_113785143_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
m54284U_201217_021426/32243738/ccs	chr4	-	182	1	Intergenic	novelGene_2255	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTCTATGTGGGAGGG	1286	False	NA	NA	False	NA	NA	NA	136027586	136027404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_136027400_136027600
m54284U_201217_021426/32245420/ccs	chr3	-	652	1	FSM	ENSMUSG00000105201.2	ENSMUST00000198192.2	2470	1	-187	2005	-187	-2005	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAGAAAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	157742233	157741581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_157741600_157742200
m54284U_201217_021426/32376641/ccs	chr12	+	229	1	Intergenic	novelGene_6715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAGAAAGAGA	NA	False	NA	NA	False	NA	NA	NA	73072843	73073072	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_73072800_73073100
m54284U_201217_021426/32508020/ccs	chr17	-	163	1	Intergenic	novelGene_8373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCATTCTCCCAA	NA	False	NA	NA	False	NA	NA	NA	13216369	13216206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_13216200_13216400
m54284U_201217_021426/32703143/ccs	chr9	+	179	1	Intergenic	novelGene_5039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAGAAAGAAAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	100930769	100930948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_100930800_100930900
m54284U_201217_021426/32768214/ccs	chr9	-	191	1	Intergenic	novelGene_4820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACTTTTGTGGAGGAT	NA	False	NA	NA	False	TTTAAA	-1	NA	58809862	58809671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_58809700_58809900
m54284U_201217_021426/3277454/ccs	chr7	-	144	1	Intergenic	novelGene_3945	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTTATGTTGTGGACC	NA	False	NA	NA	False	NA	NA	NA	89601857	89601713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_89601700_89601900
m54284U_201217_021426/3278229/ccs	chr10	-	180	1	Intergenic	novelGene_5224	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGAATATCTTGTTTGTA	NA	False	NA	NA	False	NA	NA	NA	21885348	21885168	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_21885200_21885300
m54284U_201217_021426/3278540/ccs	chr8	+	199	1	Intergenic	novelGene_4281	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCGTGATCATGGTG	NA	False	NA	NA	False	NA	NA	NA	45111942	45112141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_45111900_45112100
m54284U_201217_021426/3278632/ccs	chr1	-	176	1	Intergenic	novelGene_393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	154030849	154030673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_154030700_154030800
m54284U_201217_021426/3278816/ccs	chr6	-	191	1	Intergenic	novelGene_3386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACAAAACTCTCCAGCT	NA	False	NA	NA	False	NA	NA	NA	88941768	88941577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_88941600_88941800
m54284U_201217_021426/32901507/ccs	chr10	-	137	1	Intergenic	novelGene_5629	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAATAAAAAAAT	2316	False	NA	NA	False	NA	NA	NA	128367742	128367605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128367600_128367700
m54284U_201217_021426/32965760/ccs	chr7	+	190	1	ISM	ENSMUSG00000030604.10	ENSMUST00000205671.2	5329	4	14656	875	11039	-875	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGACAGTTAACTTAAGG	NA	False	NA	NA	False	NA	NA	NA	27521276	27521466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr7_+_27521300_27521500
m54284U_201217_021426/33032123/ccs	chr13	-	184	1	Intergenic	novelGene_7293	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTAACATCCATCAAATCT	NA	False	NA	NA	False	NA	NA	NA	107104665	107104481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_107104500_107104700
m54284U_201217_021426/33097069/ccs	chr7	+	5822	1	NIC	ENSMUSG00000055652.15	novel	3403	3	NA	NA	0	-11442	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTCAGCTATCTAGTTT	NA	False	NA	NA	False	NA	NA	NA	75498111	75503933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_75498100_75503900
m54284U_201217_021426/33097317/ccs	chr6	+	496	1	FSM	ENSMUSG00000057696.5	ENSMUST00000119767.2	348	1	-70	-78	-70	78	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTCTAACATTCTCCC	1144	False	NA	NA	False	NA	NA	NA	38353671	38354167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_38353700_38354200
m54284U_201217_021426/33163295/ccs	chr9	+	191	1	Intergenic	novelGene_4918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTCTCCATCCCTACA	NA	False	NA	NA	False	NA	NA	NA	71209522	71209713	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_71209500_71209700
m54284U_201217_021426/33229469/ccs	chr7	+	195	1	Intergenic	novelGene_3968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATGTAAGAATGGGACA	NA	False	NA	NA	False	NA	NA	NA	99124640	99124835	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_99124600_99124800
m54284U_201217_021426/33229592/ccs	chr11	+	173	1	Intergenic	novelGene_6503	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAACAAAACAAAACAAAA	5211	False	NA	NA	False	NA	NA	NA	119921912	119922085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_119921900_119922100
m54284U_201217_021426/33294088/ccs	chr6	-	187	1	Intergenic	novelGene_3109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAGGACTTTTGTGG	NA	False	NA	NA	False	NA	NA	NA	14419688	14419501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_14419500_14419700
m54284U_201217_021426/33358125/ccs	chr5	-	198	1	Intergenic	novelGene_2577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGACTCACACAGACAGG	NA	False	NA	NA	False	NA	NA	NA	53804109	53803911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_53803900_53804100
m54284U_201217_021426/33360725/ccs	chr19	+	183	1	Intergenic	novelGene_9346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCGTTTCCTTCGACCC	NA	False	NA	NA	False	NA	NA	NA	57243260	57243443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_57243300_57243400
m54284U_201217_021426/3343165/ccs	chrX	-	206	1	Intergenic	novelGene_9531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCATAATCTTATGACAT	NA	False	NA	NA	False	TTTAAA	-3	NA	92699938	92699732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_92699700_92699900
m54284U_201217_021426/3343992/ccs	chr4	-	185	1	Intergenic	novelGene_1938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACATGCACTCAGCCAC	NA	False	NA	NA	False	NA	NA	NA	98301132	98300947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_98300900_98301100
m54284U_201217_021426/33489574/ccs	chr15	-	214	1	Intergenic	novelGene_7821	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACATCCCAAACAGAAGT	NA	False	NA	NA	False	NA	NA	NA	79916370	79916156	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_79916200_79916400
m54284U_201217_021426/33491368/ccs	chr5	-	181	1	Intergenic	novelGene_2716	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATTAACTCAAACAAAT	NA	False	NA	NA	False	NA	NA	NA	104826633	104826452	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_104826500_104826600
m54284U_201217_021426/33555991/ccs	chr15	-	179	1	Intergenic	novelGene_7874	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	83520234	83520055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_83520100_83520200
m54284U_201217_021426/33556782/ccs	chr19	+	188	1	Intergenic	novelGene_9316	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCTGGGTAAAGATTG	NA	False	NA	NA	False	NA	NA	NA	46721150	46721338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46721200_46721300
m54284U_201217_021426/33556890/ccs	chr3	+	173	1	Intergenic	novelGene_1436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAGAAAGTGACATCAG	NA	False	NA	NA	False	NA	NA	NA	72398654	72398827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_72398700_72398800
m54284U_201217_021426/33621388/ccs	chr4	-	1453	8	NNC	ENSMUSG00000029048.4	novel	1803	8	NA	NA	0	-263	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_6	694.927011289969	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTTGACACTTTCCTTT	NA	False	NA	-23	True	TATAAA	-28	NA	155170828	155158829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167206_155167565_155167694_155170661
m54284U_201217_021426/33621450/ccs	chr12	-	199	1	Intergenic	novelGene_6699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACAAACCTACACATGCA	2048	False	NA	NA	False	NA	NA	NA	71112040	71111841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_71111800_71112000
m54284U_201217_021426/33751059/ccs	chrX	-	183	1	Intergenic	novelGene_9660	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGACTGGTCTTGTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	149361946	149361763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_149361800_149361900
m54284U_201217_021426/33751440/ccs	chr5	-	179	1	Intergenic	novelGene_2600	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTTTTTTAAAGCAGCT	9643	False	NA	-8	True	NA	NA	NA	66407219	66407040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_66407000_66407200
m54284U_201217_021426/33753707/ccs	chr15	-	177	1	Intergenic	novelGene_8010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAACC	NA	False	NA	NA	False	NA	NA	NA	102376044	102375867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102375900_102376000
m54284U_201217_021426/33818472/ccs	chr11	-	181	1	Intergenic	novelGene_5932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTTTAAAAAAAGAAAGAA	NA	False	NA	0	True	NA	NA	NA	68801929	68801748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68801700_68801900
m54284U_201217_021426/33818808/ccs	chr6	+	209	1	Intergenic	novelGene_3305	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAACAACGACTGTATA	3086	False	NA	NA	False	NA	NA	NA	67149343	67149552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_67149300_67149600
m54284U_201217_021426/33884843/ccs	chr14	+	1137	1	FSM	ENSMUSG00000068165.4	ENSMUST00000089275.4	628	1	-123	-386	-123	386	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAAAGGAAAGAGAGGAG	1311	False	NA	NA	False	AATAAA	-30	NA	66282405	66283542	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr14_+_66282400_66283500
m54284U_201217_021426/33884866/ccs	chr14	+	2467	1	Intergenic	novelGene_7429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCCAGAAAAAAGATTATT	NA	False	NA	NA	False	NA	NA	NA	49839703	49842170	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_49839700_49842200
m54284U_201217_021426/34014299/ccs	chr13	-	137	1	Intergenic	novelGene_7039	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	43616765	43616628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_43616600_43616800
m54284U_201217_021426/34079240/ccs	chr10	-	187	1	Intergenic	novelGene_5434	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACATTTATTTAAAACCC	NA	False	NA	NA	False	NA	NA	NA	78022041	78021854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_78021900_78022000
m54284U_201217_021426/34079556/ccs	chr8	+	188	1	Intergenic	novelGene_4244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCCTCTTGTCAGTC	NA	False	NA	NA	False	NA	NA	NA	26603537	26603725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_26603500_26603700
m54284U_201217_021426/34080036/ccs	chr14	+	4024	1	Intergenic	novelGene_7589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGATGCCACCTGGAAAA	NA	False	NA	NA	False	NA	NA	NA	105372442	105376466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_105372400_105376500
m54284U_201217_021426/34080208/ccs	chr4	-	2897	1	NIC	ENSMUSG00000078713.9	novel	639	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCGTGGTTTTGTGTTTT	-10	True	NA	NA	False	AATAAA	-14	NA	45108108	45105211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_45105200_45108100
m54284U_201217_021426/3410131/ccs	chr2	-	176	1	Intergenic	novelGene_836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATGTCATAGTAA	NA	False	NA	-9	True	NA	NA	NA	69741369	69741193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_69741200_69741400
m54284U_201217_021426/34146949/ccs	chr16	-	177	1	Intergenic	novelGene_8125	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATTTTTTATTTTGTC	NA	False	NA	NA	False	NA	NA	NA	18507283	18507106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18507100_18507300
m54284U_201217_021426/34275469/ccs	chr18	-	349	1	Intergenic	novelGene_8826	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTGGAGAGATGGCTCA	NA	False	NA	NA	False	NA	NA	NA	18235452	18235103	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_18235100_18235500
m54284U_201217_021426/34276086/ccs	chr14	-	156	1	Intergenic	novelGene_7479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	56827207	56827051	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_56827100_56827200
m54284U_201217_021426/34277148/ccs	chr15	-	189	1	Intergenic	novelGene_7781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATCAAAACTTGAAAGCA	3332	False	NA	NA	False	NA	NA	NA	76636593	76636404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76636400_76636600
m54284U_201217_021426/34341165/ccs	chr10	-	169	1	Intergenic	novelGene_5205	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGGTTTGTGCTCTCA	NA	False	NA	NA	False	NA	NA	NA	14480355	14480186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_14480200_14480400
m54284U_201217_021426/34342437/ccs	chr12	+	127	1	Intergenic	novelGene_6740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACCAGCCACAGCCAG	NA	False	NA	NA	False	NA	NA	NA	76980173	76980300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_76980200_76980300
m54284U_201217_021426/34472220/ccs	chr4	+	1850	1	NIC	ENSMUSG00000028788.15	novel	3646	6	NA	NA	0	9549	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGGGGGTGTTCAAAAT	NA	False	NA	NA	False	NA	NA	NA	129714013	129715863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_129714000_129715900
m54284U_201217_021426/34474613/ccs	chr9	-	186	1	Intergenic	novelGene_5088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGCAGTGCCTGTCTAA	NA	False	NA	NA	False	NA	NA	NA	108382999	108382813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_108382800_108383000
m54284U_201217_021426/34538026/ccs	chr2	-	158	1	Intergenic	novelGene_607	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAAAATTTTAAAC	NA	False	NA	NA	False	NA	NA	NA	18265877	18265719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_18265700_18265900
m54284U_201217_021426/34539174/ccs	chr12	-	189	1	Intergenic	novelGene_6792	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAAAAGTTACTTCTC	655	False	NA	NA	False	NA	NA	NA	83984197	83984008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_83984000_83984200
m54284U_201217_021426/34603921/ccs	chr3	-	514	1	FSM	ENSMUSG00000094392.2	ENSMUST00000119949.3	136	1	-74	-304	-74	304	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCACAAGTGACCAAAG	NA	False	NA	NA	False	NA	NA	NA	86579549	86579035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_86579000_86579500
m54284U_201217_021426/34734447/ccs	chr11	-	981	1	Antisense	novelGene_ENSMUSG00000020794.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCAGAAAACGTTTAAGT	3835	False	NA	NA	False	AATAAA	-16	NA	72498608	72497627	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_72497600_72498600
m54284U_201217_021426/3474375/ccs	chr11	-	186	1	Intergenic	novelGene_6213	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAATTTAAAAAGAAGGGC	6688	False	NA	NA	False	NA	NA	NA	94436588	94436402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_94436400_94436600
m54284U_201217_021426/3476277/ccs	chr11	+	175	1	Intergenic	novelGene_5813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAAAAGAAAGAAAT	2739	False	NA	NA	False	NA	NA	NA	51758681	51758856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_51758700_51758900
m54284U_201217_021426/34800308/ccs	chr7	+	203	1	Intergenic	novelGene_3992	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTTGGGGTGCTGG	NA	False	NA	NA	False	NA	NA	NA	101725801	101726004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_101725800_101726000
m54284U_201217_021426/34802115/ccs	chr15	-	178	1	Intergenic	novelGene_7717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAATTAAAAAAAAACC	NA	False	NA	NA	False	NA	NA	NA	55371284	55371106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_55371100_55371300
m54284U_201217_021426/34865266/ccs	chr11	-	191	1	Intergenic	novelGene_6474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTTGTTATGCTAATT	NA	False	NA	NA	False	NA	NA	NA	116379483	116379292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116379300_116379500
m54284U_201217_021426/34865406/ccs	chr17	+	199	1	Intergenic	novelGene_8748	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGACTGAAGAAAACTTGTT	NA	False	NA	NA	False	NA	NA	NA	80797186	80797385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_80797200_80797400
m54284U_201217_021426/34866878/ccs	chr15	+	195	1	Intergenic	novelGene_7703	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACATACAATTTTACTCT	9127	False	NA	18	True	NA	NA	NA	46333723	46333918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_46333700_46333900
m54284U_201217_021426/34867774/ccs	chr5	+	202	1	Intergenic	novelGene_2830	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACACTGGCTGCTCTTGCA	NA	False	NA	NA	False	NA	NA	NA	118581113	118581315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_118581100_118581300
m54284U_201217_021426/34996631/ccs	chr18	-	199	1	Intergenic	novelGene_8938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCTTTAGGGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	42650293	42650094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_42650100_42650300
m54284U_201217_021426/34998157/ccs	chr17	+	191	1	Intergenic	novelGene_8706	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAACTTGATATTCTTACT	3998	False	NA	NA	False	NA	NA	NA	71145376	71145567	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71145400_71145600
m54284U_201217_021426/35062066/ccs	chr1	-	189	1	Intergenic	novelGene_435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	161116367	161116178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_161116200_161116400
m54284U_201217_021426/35129021/ccs	chr8	-	176	1	Intergenic	novelGene_4459	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCCA	NA	False	NA	NA	False	NA	NA	NA	107300295	107300119	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_107300100_107300300
m54284U_201217_021426/35258774/ccs	chr17	-	177	1	Intergenic	novelGene_8645	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATTTTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	53869715	53869538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_53869500_53869700
m54284U_201217_021426/35258797/ccs	chr2	-	212	1	Intergenic	novelGene_785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTGCCTCTATATTTT	NA	False	NA	NA	False	NA	NA	NA	44718511	44718299	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_44718300_44718500
m54284U_201217_021426/35326215/ccs	chr2	-	202	1	Intergenic	novelGene_1238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGGAGTTATATCCCCCA	NA	False	NA	NA	False	NA	NA	NA	166750183	166749981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_166750000_166750200
m54284U_201217_021426/3541181/ccs	chr5	+	229	1	Intergenic	novelGene_3005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGATAACTGCCAGTTG	NA	False	NA	NA	False	NA	NA	NA	137878755	137878984	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137878800_137879000
m54284U_201217_021426/35522777/ccs	chr9	-	172	1	Intergenic	novelGene_4777	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATAAATCTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	54766594	54766422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_54766400_54766600
m54284U_201217_021426/35586144/ccs	chr2	+	3147	10	NNC	ENSMUSG00000059005.14	novel	1654	11	NA	NA	0	1172	intron_retention	FALSE	canonical	0	0	junction_5	3726.98686757964	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCTTTTATTCATA	7475	False	NA	NA	False	ATTAAA	-16	NA	75489604	75497637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75493056_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
m54284U_201217_021426/35586486/ccs	chr12	-	175	1	Intergenic	novelGene_6895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAACAAACAAACAAT	NA	False	NA	NA	False	NA	NA	NA	110574800	110574625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_110574600_110574800
m54284U_201217_021426/35588550/ccs	chr7	-	3386	1	FSM	ENSMUSG00000108894.2	ENSMUST00000207700.2	164	1	-521	-2701	-521	2701	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGGAAGAAAGAAGAAAG	9626	False	NA	NA	False	NA	NA	NA	6158970	6155584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_6155600_6159000
m54284U_201217_021426/35717459/ccs	chrX	-	209	1	Intergenic	novelGene_9510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCTGCACAGTCATGAT	NA	False	NA	NA	False	NA	NA	NA	74109081	74108872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_74108900_74109100
m54284U_201217_021426/35718201/ccs	chr5	-	229	1	Intergenic	novelGene_2719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGACATCCTCTACCC	NA	False	NA	NA	False	CATAAA	-7	NA	105843222	105842993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_105843000_105843200
m54284U_201217_021426/35718741/ccs	chr2	-	184	1	Intergenic	novelGene_577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTCATCATCGTTCA	2411	False	NA	NA	False	NA	NA	NA	5842540	5842356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_5842400_5842500
m54284U_201217_021426/35719916/ccs	chr4	-	178	1	Intergenic	novelGene_2147	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGTTGTCCAGGTCAT	NA	False	NA	NA	False	NA	NA	NA	129281278	129281100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_129281100_129281300
m54284U_201217_021426/35785479/ccs	chr7	+	191	1	Intergenic	novelGene_3913	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAGTACATTTGCAAACA	441	False	NA	NA	False	NA	NA	NA	79843012	79843203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79843000_79843200
m54284U_201217_021426/35848613/ccs	chr4	-	112	1	Intergenic	novelGene_2112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAACAACAAC	NA	False	NA	NA	False	NA	NA	NA	126116419	126116307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_126116300_126116400
m54284U_201217_021426/35848981/ccs	chr2	-	206	1	Intergenic	novelGene_736	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTTGAGACTGTTATA	NA	False	NA	NA	False	NA	NA	NA	33398836	33398630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_33398600_33398800
m54284U_201217_021426/35849379/ccs	chr4	-	188	1	Intergenic	novelGene_1749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGACAAGTACCTTCTTA	NA	False	NA	NA	False	NA	NA	NA	11309257	11309069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_11309100_11309300
m54284U_201217_021426/35849458/ccs	chr6	+	218	1	Intergenic	novelGene_3244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATTAGGAGTCTGGGTA	NA	False	NA	NA	False	NA	NA	NA	47387418	47387636	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_47387400_47387600
m54284U_201217_021426/35849477/ccs	chr13	-	174	1	Intergenic	novelGene_7280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAAAAAAACTAACAA	NA	False	NA	NA	False	NA	NA	NA	100844099	100843925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_100843900_100844100
m54284U_201217_021426/36047091/ccs	chr2	-	189	1	Intergenic	novelGene_808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGATTTTTCATCCCAA	3297	False	NA	NA	False	NA	NA	NA	60007268	60007079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_60007100_60007300
m54284U_201217_021426/36047554/ccs	chr14	+	175	1	Intergenic	novelGene_7557	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAAGTCTCTTTCTGC	NA	False	NA	NA	False	NA	NA	NA	79632551	79632726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_79632600_79632700
m54284U_201217_021426/3605334/ccs	chr5	-	183	1	Intergenic	novelGene_2639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAAAGTGGGTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	77477950	77477767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_77477800_77478000
m54284U_201217_021426/3607106/ccs	chr17	-	205	1	Intergenic	novelGene_8648	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTTTGTCTTGGTTCCT	NA	False	NA	-2	True	NA	NA	NA	54004876	54004671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_54004700_54004900
m54284U_201217_021426/36177734/ccs	chr15	+	196	1	Intergenic	novelGene_7916	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGGGAACCAAGGCAGGT	NA	False	NA	NA	False	NA	NA	NA	95720342	95720538	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_95720300_95720500
m54284U_201217_021426/36243878/ccs	chr2	-	175	1	Intergenic	novelGene_582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAAATAAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	5988772	5988597	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_5988600_5988800
m54284U_201217_021426/36308930/ccs	chr2	-	589	1	FSM	ENSMUSG00000080977.2	ENSMUST00000118431.2	317	1	-85	-187	-85	187	mono-exon	FALSE	NA	NA	NA	NA	NA	252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCTACCACGGCTCTC	1864	False	NA	NA	False	ATTAAA	-19	NA	90635005	90634416	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_90634400_90635000
m54284U_201217_021426/36309668/ccs	chr5	-	132	1	Intergenic	novelGene_2626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTAACCTTCTGCTT	8328	False	NA	NA	False	NA	NA	NA	76966286	76966154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_76966200_76966300
m54284U_201217_021426/36506029/ccs	chr17	-	198	1	Intergenic	novelGene_8482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTTTTTTAAATAAA	NA	False	NA	NA	False	NA	NA	NA	29265858	29265660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29265700_29265900
m54284U_201217_021426/36571093/ccs	chr3	+	2487	1	ISM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	236636	4819	4518	2884	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTCCTGAGACCTGTA	NA	False	NA	NA	False	AATAAA	-26	NA	69460829	69463316	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_69460800_69463300
m54284U_201217_021426/3670370/ccs	chr11	-	177	1	Intergenic	novelGene_5876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGAGCAAGTGGGGCTG	5157	False	NA	NA	False	NA	NA	NA	59444837	59444660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_59444700_59444800
m54284U_201217_021426/36765735/ccs	chr4	+	176	1	Intergenic	novelGene_1848	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATATATAAAAAATAAT	NA	False	NA	NA	False	NA	NA	NA	45534937	45535113	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_45534900_45535100
m54284U_201217_021426/36766236/ccs	chr9	+	218	1	Intergenic	novelGene_4721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATATATATATATAAAAT	NA	False	NA	NA	False	TTTAAA	-8	NA	43008111	43008329	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_43008100_43008300
m54284U_201217_021426/36898081/ccs	chr18	-	155	1	Intergenic	novelGene_8901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGAGGTAATCTTT	NA	False	NA	-21	True	NA	NA	NA	35955661	35955506	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35955500_35955700
m54284U_201217_021426/36964626/ccs	chr6	-	195	1	Intergenic	novelGene_3376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTCAGCCCTCGACACA	7202	False	NA	NA	False	NA	NA	NA	87974435	87974240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_87974200_87974400
m54284U_201217_021426/37028566/ccs	chr15	-	180	1	Intergenic	novelGene_7787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATCTGTAAGACATTTTA	NA	False	NA	NA	False	NA	NA	NA	76827884	76827704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76827700_76827900
m54284U_201217_021426/37030207/ccs	chr13	+	226	1	Intergenic	novelGene_7226	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCCAGGAATCCAACAC	NA	False	NA	NA	False	NA	NA	NA	83064776	83065002	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_83064800_83065000
m54284U_201217_021426/37094593/ccs	chr6	-	197	1	Intergenic	novelGene_3567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTGGTTTTGAATCAAGA	NA	False	NA	NA	False	NA	NA	NA	141314738	141314541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_141314500_141314700
m54284U_201217_021426/37095613/ccs	chr15	-	10956	19	NIC	ENSMUSG00000036698.12	novel	13800	19	NA	NA	0	-2748	combination_of_known_junctions	FALSE	canonical	0	0	junction_18	22.5449482447404	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGGCTTCATGTCATT	6183	False	NA	0	True	TATAAA	-24	NA	73049696	72970440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73049617
m54284U_201217_021426/37160764/ccs	chr11	-	189	1	Intergenic	novelGene_5968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAACTGGAAAGATAGCT	NA	False	NA	NA	False	NA	NA	NA	70740384	70740195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_70740200_70740400
m54284U_201217_021426/37291300/ccs	chr16	+	187	1	Intergenic	novelGene_8152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGATGTGAAATATAAATA	2779	False	NA	NA	False	NA	NA	NA	21207833	21208020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_21207800_21208000
m54284U_201217_021426/3735894/ccs	chr2	-	240	1	Intergenic	novelGene_682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCCAGGTTCAATTCCAG	NA	False	NA	NA	False	NA	NA	NA	30161276	30161036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_30161000_30161300
m54284U_201217_021426/3737922/ccs	chr15	-	192	1	Intergenic	novelGene_8020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAGTATTCAGCTGGGAG	NA	False	NA	NA	False	NA	NA	NA	103281469	103281277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_103281300_103281500
m54284U_201217_021426/37421274/ccs	chr5	+	192	1	Intergenic	novelGene_2941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGGTAAGGATGGGGT	NA	False	NA	NA	False	NA	NA	NA	129231893	129232085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_129231900_129232100
m54284U_201217_021426/37421884/ccs	chr9	+	179	1	Intergenic	novelGene_4627	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATCTTTTAAATCAAAAG	NA	False	NA	NA	False	NA	NA	NA	8013165	8013344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_8013200_8013300
m54284U_201217_021426/37488408/ccs	chr15	+	184	1	Intergenic	novelGene_7968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATACTTAGACTC	270	False	NA	NA	False	NA	NA	NA	99671389	99671573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_99671400_99671600
m54284U_201217_021426/37489212/ccs	chr7	+	207	1	Intergenic	novelGene_4138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAATCACATTCCTAAC	7715	False	NA	NA	False	TTTAAA	-10	NA	135404061	135404268	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_135404100_135404300
m54284U_201217_021426/37489318/ccs	chr7	-	194	1	Intergenic	novelGene_3878	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGGCAGGAAGGAAAGAT	NA	False	NA	NA	False	NA	NA	NA	64993064	64992870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_64992900_64993100
m54284U_201217_021426/37554429/ccs	chr9	-	176	1	Intergenic	novelGene_4727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAAATTCAGTCCCTC	NA	False	NA	NA	False	NA	NA	NA	43637522	43637346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_43637300_43637500
m54284U_201217_021426/37619050/ccs	chr12	+	2394	1	NIC	ENSMUSG00000020621.7	novel	1480	2	NA	NA	0	-2397	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	10440771	10443165	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_10440800_10443200
m54284U_201217_021426/37686111/ccs	chr12	+	190	1	Intergenic	novelGene_6897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGGCTGGAATGATGGCT	2746	False	NA	NA	False	NA	NA	NA	110612098	110612288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_110612100_110612300
m54284U_201217_021426/37750429/ccs	chr7	-	2337	1	NIC	ENSMUSG00000046574.9	novel	7023	14	NA	NA	3835	-18455	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAGATAAAATGTTGTG	NA	False	NA	11	True	ATTAAA	-33	NA	44698470	44696133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_44696100_44698500
m54284U_201217_021426/37882292/ccs	chr4	-	175	1	Intergenic	novelGene_1861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAATACACAGGAG	NA	False	NA	NA	False	NA	NA	NA	48763234	48763059	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_48763100_48763200
m54284U_201217_021426/37946401/ccs	chr6	-	3683	1	Intergenic	novelGene_3289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	False	NA	NA	False	NA	NA	NA	55003078	54999395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_54999400_55003100
m54284U_201217_021426/37947657/ccs	chr6	+	206	1	Intergenic	novelGene_3447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTTACCAGCCCCCAC	NA	False	NA	NA	False	NA	NA	NA	119828973	119829179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_119829000_119829200
m54284U_201217_021426/3801777/ccs	chr10	+	1576	12	NNC	ENSMUSG00000069565.13	novel	2081	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_4	275.204416887484	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACAACAGGGTTTAAAAA	NA	False	NA	13	True	AATAAA	-15	NA	80100817	80123727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110714_80113408_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
m54284U_201217_021426/38208335/ccs	chr17	-	176	1	Intergenic	novelGene_8505	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTTTTTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	30245544	30245368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_30245400_30245500
m54284U_201217_021426/38274027/ccs	chr7	-	184	1	Intergenic	novelGene_3616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATGGTCTGCACCTAG	NA	False	NA	NA	False	NA	NA	NA	3408135	3407951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3408000_3408100
m54284U_201217_021426/38275878/ccs	chr4	+	175	1	Intergenic	novelGene_2028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGTAGAAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	116610229	116610404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116610200_116610400
m54284U_201217_021426/38405667/ccs	chr9	-	157	1	Intergenic	novelGene_4791	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATAAATAAATCT	1006	False	NA	NA	False	NA	NA	NA	56859485	56859328	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_56859300_56859500
m54284U_201217_021426/38535354/ccs	chr13	-	194	1	Intergenic	novelGene_7070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGACTGTCTGGAACTT	6305	False	NA	NA	False	NA	NA	NA	51761260	51761066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_51761100_51761300
m54284U_201217_021426/38535616/ccs	chr12	+	187	1	Intergenic	novelGene_6605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTGAGACAGGGTTT	NA	False	NA	NA	False	NA	NA	NA	28719450	28719637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_28719400_28719600
m54284U_201217_021426/38667193/ccs	chr9	-	195	1	Intergenic	novelGene_5022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCTGGAAATTCTGT	NA	False	NA	NA	False	NA	NA	NA	97032871	97032676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_97032700_97032900
m54284U_201217_021426/3868883/ccs	chr13	-	2892	15	NNC	ENSMUSG00000021546.19	novel	2653	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_14	2550.4717900892	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACGTGTGCCCAATTTGA	5697	False	NA	-19	True	AATAAA	-19	NA	58549384	58539048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58548990
m54284U_201217_021426/38731800/ccs	chr8	-	176	1	Intergenic	novelGene_4532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAGAAGGGCCGGAG	NA	False	NA	NA	False	NA	NA	NA	118037742	118037566	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_118037600_118037700
m54284U_201217_021426/38733056/ccs	chr19	+	221	1	Intergenic	novelGene_9244	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATAGTAAATAACTGATGAA	NA	False	NA	NA	False	NA	NA	NA	38326714	38326935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_38326700_38326900
m54284U_201217_021426/38733923/ccs	chrX	-	186	1	Intergenic	novelGene_9447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGTAAATAAGT	NA	False	NA	NA	False	NA	NA	NA	47561199	47561013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_47561000_47561200
m54284U_201217_021426/38734067/ccs	chr4	-	169	1	Intergenic	novelGene_2241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	135017536	135017367	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135017400_135017500
m54284U_201217_021426/38734558/ccs	chr15	-	183	1	Intergenic	novelGene_7930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAAAAGTCTCCAGTAAA	NA	False	NA	NA	False	NA	NA	NA	97262845	97262662	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_97262700_97262800
m54284U_201217_021426/38799169/ccs	chr10	-	196	1	Intergenic	novelGene_5315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATGCTTCATATCTTA	8877	False	NA	NA	False	NA	NA	NA	59849912	59849716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_59849700_59849900
m54284U_201217_021426/38800074/ccs	chr12	-	1320	8	NNC	ENSMUSG00000001270.10	novel	1472	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	110	junction_6	2712.01954270245	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTGTTGCTTCTCC	NA	False	NA	-8	True	AATAAA	-21	NA	111638717	111635794	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638296_111638408_111638663
m54284U_201217_021426/38862975/ccs	chr8	+	185	1	Intergenic	novelGene_4252	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGGAAGGTTCATGTGG	NA	False	NA	NA	False	NA	NA	NA	27820226	27820411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_27820200_27820400
m54284U_201217_021426/38863179/ccs	chr5	+	186	1	Intergenic	novelGene_2761	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTTTAAAAGTTTG	9059	False	NA	NA	False	NA	NA	NA	110190090	110190276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_110190100_110190300
m54284U_201217_021426/38864736/ccs	chr14	-	434	1	Intergenic	novelGene_7369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATATCTGAGCCTCATCAG	NA	False	NA	NA	False	AATAAA	-4	NA	26717396	26716962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_26717000_26717400
m54284U_201217_021426/38931139/ccs	chr1	+	216	1	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAACTACACTCTATA	NA	False	NA	NA	False	TTTAAA	-10	NA	28488031	28488247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_28488000_28488200
m54284U_201217_021426/38994674/ccs	chr3	-	205	1	Intergenic	novelGene_1608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGAGAAAGACTCA	NA	False	NA	NA	False	NA	NA	NA	103193732	103193527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_103193500_103193700
m54284U_201217_021426/38995050/ccs	chr14	-	193	1	Intergenic	novelGene_7605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCCAAGCTGATGCTTC	NA	False	NA	NA	False	NA	NA	NA	122788132	122787939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_122787900_122788100
m54284U_201217_021426/38995675/ccs	chr11	-	3268	1	NIC	ENSMUSG00000007777.10	novel	813	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATGTGTATGAATGCT	5184	False	NA	-12	True	ATTAAA	-14	NA	51579480	51576212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_51576200_51579500
m54284U_201217_021426/39059468/ccs	chr2	-	179	1	Intergenic	novelGene_697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCAATCTGGAACCCC	NA	False	NA	NA	False	NA	NA	NA	31089871	31089692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_31089700_31089900
m54284U_201217_021426/39060089/ccs	chr8	+	172	1	Intergenic	novelGene_4228	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATATATGATTTAATAT	NA	False	NA	NA	False	NA	NA	NA	23527317	23527489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_23527300_23527500
m54284U_201217_021426/39127668/ccs	chr15	+	182	1	Intergenic	novelGene_7681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAGACTGAATAGTTAGC	NA	False	NA	NA	False	NA	NA	NA	36647388	36647570	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_36647400_36647600
m54284U_201217_021426/39127898/ccs	chr4	+	191	1	Intergenic	novelGene_1849	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGAGGACCAGGCTTC	2778	False	NA	NA	False	NA	NA	NA	45801882	45802073	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_45801900_45802100
m54284U_201217_021426/39191580/ccs	chr16	-	182	1	Intergenic	novelGene_8178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGTATCAACTGAAATGC	NA	False	NA	NA	False	NA	NA	NA	29971412	29971230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_29971200_29971400
m54284U_201217_021426/39193034/ccs	chr18	-	180	1	Intergenic	novelGene_9010	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAGTAAAATAAAAC	NA	False	NA	NA	False	NA	NA	NA	73623977	73623797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_73623800_73624000
m54284U_201217_021426/3934568/ccs	chr2	+	180	1	Intergenic	novelGene_671	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCCACAGGGCTGCCA	NA	False	NA	NA	False	NA	NA	NA	29640079	29640259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_29640100_29640300
m54284U_201217_021426/3934839/ccs	chr18	-	176	1	Intergenic	novelGene_8972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATTAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	61115075	61114899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_61114900_61115100
m54284U_201217_021426/39454384/ccs	chr5	-	191	1	Intergenic	novelGene_2816	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGTTAAGAGCACTGAC	NA	False	NA	NA	False	NA	NA	NA	116190748	116190557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_116190600_116190700
m54284U_201217_021426/394832/ccs	chrX	-	183	1	Intergenic	novelGene_9369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCATGGGAAAAAATGAA	NA	False	NA	NA	False	NA	NA	NA	7878259	7878076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_7878100_7878300
m54284U_201217_021426/39584013/ccs	chr9	-	120	1	Intergenic	novelGene_4779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAATCTTTAAAA	74	False	NA	NA	False	NA	NA	NA	54849992	54849872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_54849900_54850000
m54284U_201217_021426/39584956/ccs	chrX	-	177	1	Intergenic	novelGene_9589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAGAAAAATTCACT	NA	False	NA	NA	False	NA	NA	NA	102714929	102714752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_102714800_102714900
m54284U_201217_021426/39586053/ccs	chr18	-	186	1	Intergenic	novelGene_8939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACTAATCAGAAAGTGAAG	NA	False	NA	NA	False	NA	NA	NA	42652123	42651937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_42651900_42652100
m54284U_201217_021426/39651839/ccs	chr17	+	3692	3	NNC	ENSMUSG00000036036.16	novel	2597	3	NA	NA	0	0	intron_retention	FALSE	canonical	2	42	junction_1	1648.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGTCTTTGTATTTGTT	NA	False	NA	36	True	AATAAA	-41	NA	37313445	37321524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_37315796_37316958_37317087_37320310
m54284U_201217_021426/39780951/ccs	chr13	-	145	1	Intergenic	novelGene_7169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAATAAATAAATCTTT	3500	False	NA	NA	False	NA	NA	NA	64621294	64621149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64621100_64621300
m54284U_201217_021426/39781363/ccs	chr2	-	128	1	Intergenic	novelGene_572	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAATTAGGTAT	NA	False	NA	NA	False	NA	NA	NA	5030221	5030093	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_5030100_5030200
m54284U_201217_021426/39782715/ccs	chr6	-	5081	1	NIC	ENSMUSG00000030082.15	novel	3172	12	NA	NA	0	63	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	9172	False	NA	NA	False	NA	NA	NA	88495810	88490729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_88490700_88495800
m54284U_201217_021426/39912673/ccs	chr19	-	181	1	Intergenic	novelGene_9214	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTAGTTTGTTTC	NA	False	NA	NA	False	NA	NA	NA	32394038	32393857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_32393900_32394000
m54284U_201217_021426/39977254/ccs	chr19	-	172	1	Intergenic	novelGene_9065	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	3638783	3638611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_3638600_3638800
m54284U_201217_021426/39977862/ccs	chr4	+	5925	1	Intergenic	novelGene_2351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCGAGACTGTATTCCT	NA	False	NA	NA	False	AATGAA	-9	NA	147058664	147064589	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_147058700_147064600
m54284U_201217_021426/39978341/ccs	chr8	+	3653	11	NNC	ENSMUSG00000037656.10	novel	436	3	NA	NA	200	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	216.031571766721	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTCTGACGTCTTTTT	NA	False	NA	15	True	AATAAA	-20	NA	22996441	23059628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_+_22996671_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050516_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
m54284U_201217_021426/3997855/ccs	chr13	-	195	1	Intergenic	novelGene_7145	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCTGGGTCCTAAAAC	NA	False	NA	NA	False	NA	NA	NA	62661041	62660846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_62660800_62661000
m54284U_201217_021426/3998308/ccs	chr2	+	209	1	Intergenic	novelGene_787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCACAATTTCTGTATCC	NA	False	NA	NA	False	NA	NA	NA	45191402	45191611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_45191400_45191600
m54284U_201217_021426/40043786/ccs	chr9	-	4492	1	Antisense	novelGene_ENSMUSG00000033335.18_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	21385685	21381193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_-_21381200_21385700
m54284U_201217_021426/40045253/ccs	chr2	-	215	1	Intergenic	novelGene_1186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCCTCAGAACCTGGGA	9310	False	NA	NA	False	NA	NA	NA	156944085	156943870	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156943900_156944100
m54284U_201217_021426/40175980/ccs	chr9	+	177	1	Intergenic	novelGene_4724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAGTATACTTTTCT	NA	False	NA	NA	False	NA	NA	NA	43118234	43118411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_43118200_43118400
m54284U_201217_021426/40305806/ccs	chr12	-	199	1	Intergenic	novelGene_6786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTACACTTAGATTGGAGA	NA	False	NA	NA	False	NA	NA	NA	83694136	83693937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_83693900_83694100
m54284U_201217_021426/40436161/ccs	chr1	-	178	1	Intergenic	novelGene_324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	2145	False	NA	NA	False	NA	NA	NA	133659248	133659070	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_133659100_133659200
m54284U_201217_021426/40438133/ccs	chr2	-	175	1	Intergenic	novelGene_1217	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGATTTA	NA	False	NA	NA	False	NA	NA	NA	164708285	164708110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_164708100_164708300
m54284U_201217_021426/40632889/ccs	chr17	-	173	1	Intergenic	novelGene_8775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAATAAATAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	87890917	87890744	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_87890700_87890900
m54284U_201217_021426/40634119/ccs	chr16	-	170	1	Intergenic	novelGene_8183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTAAATGAAGGTGTT	1754	False	NA	NA	False	NA	NA	NA	30265794	30265624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_30265600_30265800
m54284U_201217_021426/40635197/ccs	chr7	-	183	1	Intergenic	novelGene_3867	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTTTAAAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	51229206	51229023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_51229000_51229200
m54284U_201217_021426/40699121/ccs	chr9	+	5705	1	Genic_Genomic	ENSMUSG00000084911.2	novel	NA	NA	NA	NA	-177	2243	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACACTTTAAACAGCACT	NA	False	NA	NA	False	NA	NA	NA	96967201	96972906	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_96967200_96972900
m54284U_201217_021426/40763494/ccs	chr18	+	205	1	Intergenic	novelGene_8890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATATATATATATGGT	85	False	NA	NA	False	NA	NA	NA	35599329	35599534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_35599300_35599500
m54284U_201217_021426/40763887/ccs	chr7	+	139	1	Intergenic	novelGene_3714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTTATAATAAATAAATC	NA	False	NA	NA	False	NA	NA	NA	26851255	26851394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_26851300_26851400
m54284U_201217_021426/40766138/ccs	chr16	-	520	1	FSM	ENSMUSG00000050299.9	ENSMUST00000052867.9	402	1	-59	-59	-59	59	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACTTGCAAAGCAAACT	NA	False	NA	-2	True	AATAAA	-30	NA	76200599	76200079	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_76200100_76200600
m54284U_201217_021426/40829805/ccs	chr17	-	919	1	NIC	ENSMUSG00000002017.11	novel	2817	8	NA	NA	0	-6488	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75858868	75857949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_75857900_75858900
m54284U_201217_021426/40894476/ccs	chr11	+	201	1	Intergenic	novelGene_6317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAATAGAGTTAGACAGG	NA	False	NA	NA	False	TTTAAA	-7	NA	100109193	100109394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_100109200_100109400
m54284U_201217_021426/40895830/ccs	chr1	-	191	1	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCACAGCATGCAACAC	6639	False	NA	NA	False	NA	NA	NA	9985303	9985112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_9985100_9985300
m54284U_201217_021426/40960306/ccs	chr11	-	176	1	Intergenic	novelGene_6112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	796	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTTTTTTCCTCGAGA	NA	False	NA	-6	True	NA	NA	NA	80317445	80317269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80317300_80317400
m54284U_201217_021426/40961694/ccs	chr17	-	217	1	Intergenic	novelGene_8492	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTTGAGACATTGTCT	NA	False	NA	NA	False	NA	NA	NA	29606158	29605941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29605900_29606200
m54284U_201217_021426/41025609/ccs	chr19	-	202	1	Intergenic	novelGene_9275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAGTGCAAACTTGAG	NA	False	NA	NA	False	NA	NA	NA	43701763	43701561	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_43701600_43701800
m54284U_201217_021426/41025853/ccs	chr13	-	166	1	Intergenic	novelGene_7126	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCCCTTTATAAGACTT	NA	False	NA	NA	False	NA	NA	NA	58650756	58650590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_58650600_58650800
m54284U_201217_021426/41026592/ccs	chr13	-	188	1	Intergenic	novelGene_6970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAATGCTGGTACATCC	NA	False	NA	NA	False	NA	NA	NA	13837033	13836845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_13836800_13837000
m54284U_201217_021426/41158886/ccs	chr4	+	190	1	Intergenic	novelGene_1737	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACTGGCTGCTTTTCTA	NA	False	NA	NA	False	NA	NA	NA	10909296	10909486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_10909300_10909500
m54284U_201217_021426/41159063/ccs	chr10	-	194	1	Intergenic	novelGene_5402	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACGTTGAAAGGGAAAG	NA	False	NA	NA	False	NA	NA	NA	74924944	74924750	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_74924800_74924900
m54284U_201217_021426/41288160/ccs	chr3	+	164	1	Antisense	novelGene_ENSMUSG00000106025.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTTCATCTACTTAC	NA	False	NA	NA	False	NA	NA	NA	116367458	116367622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr3_+_116367500_116367600
m54284U_201217_021426/41290303/ccs	chr8	-	1850	1	NIC	ENSMUSG00000015994.11	novel	1930	9	NA	NA	58	-13184	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAAGTATTTT	NA	False	NA	NA	False	NA	NA	NA	26505620	26503770	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_26503800_26505600
m54284U_201217_021426/4130384/ccs	chr2	-	200	1	Intergenic	novelGene_934	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAGATCCTAGAGTCAGT	5867	False	NA	NA	False	NA	NA	NA	91579118	91578918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91578900_91579100
m54284U_201217_021426/4131197/ccs	chr6	+	174	1	Intergenic	novelGene_3424	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAAGGAGGCAC	NA	False	NA	NA	False	NA	NA	NA	113567715	113567889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_113567700_113567900
m54284U_201217_021426/41355744/ccs	chrX	-	175	1	Intergenic	novelGene_9554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	100143264	100143089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_100143100_100143300
m54284U_201217_021426/41418947/ccs	chr1	-	198	1	Intergenic	novelGene_199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAGATAGGGT	NA	False	NA	NA	False	NA	NA	NA	75349084	75348886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_75348900_75349100
m54284U_201217_021426/41420498/ccs	chr16	-	207	1	Intergenic	novelGene_8174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAATGAAACAAAATAAA	NA	False	NA	NA	False	AAAACA	-6	NA	29514896	29514689	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_29514700_29514900
m54284U_201217_021426/41420732/ccs	chr5	-	186	1	Intergenic	novelGene_2617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATGGATGTCAGAGATC	NA	False	NA	NA	False	NA	NA	NA	73487494	73487308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_73487300_73487500
m54284U_201217_021426/41486513/ccs	chrX	-	196	1	Intergenic	novelGene_9372	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGAGAGGACCAGGCAT	NA	False	NA	NA	False	NA	NA	NA	8046982	8046786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_8046800_8047000
m54284U_201217_021426/41552095/ccs	chr1	+	192	1	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGTAAACACAAGATAGT	NA	False	NA	NA	False	NA	NA	NA	8560278	8560470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_8560300_8560500
m54284U_201217_021426/41616313/ccs	chr17	-	189	1	Intergenic	novelGene_8451	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATAAGGAAAAACCTGCCT	NA	False	NA	NA	False	NA	NA	NA	27762085	27761896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_27761900_27762100
m54284U_201217_021426/41746660/ccs	chr15	+	243	1	Intergenic	novelGene_7929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATACAGGGACAAAGGC	NA	False	NA	82	True	TATAAA	-1	NA	97024529	97024772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_97024500_97024800
m54284U_201217_021426/41748516/ccs	chr15	+	177	1	Intergenic	novelGene_7831	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCTTAAATCTTAAA	3164	False	NA	NA	False	NA	NA	NA	80951680	80951857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_80951700_80951900
m54284U_201217_021426/41812147/ccs	chr13	-	768	1	Intergenic	novelGene_7317	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	114208075	114207307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_114207300_114208100
m54284U_201217_021426/41812972/ccs	chr2	-	2398	3	ISM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	-294	56400	-294	924	5prime_fragment	FALSE	canonical	3	89	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTGAGCATGTCTAT	NA	False	NA	NA	False	AATAAA	-17	NA	102231539	102186863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr2_-_102188002_102211208_102211287_102230357
m54284U_201217_021426/4194446/ccs	chr5	-	169	1	Intergenic	novelGene_2788	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCCAAAACAAC	NA	False	NA	NA	False	NA	NA	NA	114625656	114625487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_114625500_114625700
m54284U_201217_021426/4195232/ccs	chrX	+	158	1	Intergenic	novelGene_9421	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATAAATAAGTA	NA	False	NA	NA	False	NA	NA	NA	36041082	36041240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_36041100_36041200
m54284U_201217_021426/4195476/ccs	chr17	-	160	1	Intergenic	novelGene_8432	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGACTAGATTAA	NA	False	NA	NA	False	NA	NA	NA	26471618	26471458	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26471500_26471600
m54284U_201217_021426/4195570/ccs	chr14	+	177	1	ISM	ENSMUSG00000097431.3	ENSMUST00000181482.2	2513	2	6973	1478	6965	201	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAGTAACATGAAAT	345	False	NA	NA	False	NA	NA	NA	51114805	51114982	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr14_+_51114800_51115000
m54284U_201217_021426/4195945/ccs	chr12	+	199	1	Intergenic	novelGene_6708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTTATACATTTACA	NA	False	NA	NA	False	AAAAAG	-6	NA	71845800	71845999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_71845800_71846000
m54284U_201217_021426/42140017/ccs	chr14	+	174	1	Intergenic	novelGene_7346	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAAAACCTATTCATT	NA	False	NA	NA	False	NA	NA	NA	20594734	20594908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_20594700_20594900
m54284U_201217_021426/42142125/ccs	chr18	-	173	1	Intergenic	novelGene_9026	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	76972628	76972455	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_76972500_76972600
m54284U_201217_021426/42337583/ccs	chr11	-	4376	1	FSM	ENSMUSG00000089542.3	ENSMUST00000158917.3	144	1	-2317	-1915	-2317	1915	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	False	NA	63	True	AATAAA	-18	NA	69562138	69557762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69557800_69562100
m54284U_201217_021426/42404378/ccs	chr8	-	190	1	Intergenic	novelGene_4479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTTAAATATATGTCGT	NA	False	NA	NA	False	NA	NA	NA	108315595	108315405	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_108315400_108315600
m54284U_201217_021426/42470203/ccs	chr12	+	174	1	Intergenic	novelGene_6938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGCCAGAGCGAGCAGGG	NA	False	NA	NA	False	NA	NA	NA	114142729	114142903	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_114142700_114142900
m54284U_201217_021426/42534965/ccs	chr7	-	191	1	Genic_Genomic	ENSMUSG00000038489.9	novel	NA	NA	NA	NA	3105	23	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGCCTTAGGCTAGAG	8915	False	NA	NA	False	AAGAAA	-3	NA	141051940	141051749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_-_141051700_141051900
m54284U_201217_021426/4261369/ccs	chr16	-	737	1	FSM	ENSMUSG00000084838.4	ENSMUST00000117664.2	286	1	167	-618	167	618	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGCTTGATACTGCTA	NA	False	NA	NA	False	AATAAA	-29	NA	19995595	19994858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr16_-_19994900_19995600
m54284U_201217_021426/4261650/ccs	chr7	+	190	1	Intergenic	novelGene_3942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTCCTAACCTTAGAAT	NA	False	NA	NA	False	NA	NA	NA	88201994	88202184	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_88202000_88202200
m54284U_201217_021426/42666246/ccs	chr18	-	160	1	Intergenic	novelGene_8842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGGATTAGAAGTGAAT	NA	False	NA	NA	False	NA	NA	NA	24508575	24508415	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_24508400_24508600
m54284U_201217_021426/42797257/ccs	chr4	+	1943	1	Intergenic	novelGene_2001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	108566950	108568893	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_108567000_108568900
m54284U_201217_021426/42927525/ccs	chr4	+	1723	1	FSM	ENSMUSG00000067261.5	ENSMUST00000087285.5	2324	1	652	-51	652	51	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTGTTTTAATTAGGT	NA	False	NA	6	True	AATAAA	-16	NA	99545187	99546910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_+_99545200_99546900
m54284U_201217_021426/43059876/ccs	chr7	-	185	1	Intergenic	novelGene_3763	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAAAAAGACAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	29657058	29656873	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29656900_29657100
m54284U_201217_021426/43188770/ccs	chr2	-	196	1	Intergenic	novelGene_1174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCAAAAACTAATAATAGTC	3937	False	NA	NA	False	NA	NA	NA	156012819	156012623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156012600_156012800
m54284U_201217_021426/43254806/ccs	chr8	+	155	1	Intergenic	novelGene_4385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAATTAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86149089	86149244	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_86149100_86149200
m54284U_201217_021426/4327465/ccs	chr9	+	168	1	Intergenic	novelGene_4910	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAAGGTTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	69933233	69933401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_69933200_69933400
m54284U_201217_021426/43320729/ccs	chr3	+	174	1	Intergenic	novelGene_1715	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAAATATATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	145662821	145662995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_145662800_145663000
m54284U_201217_021426/43321584/ccs	chr16	+	183	1	Intergenic	novelGene_8307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGAGTGACACAGACAG	NA	False	NA	NA	False	NA	NA	NA	87234455	87234638	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_87234500_87234600
m54284U_201217_021426/43321871/ccs	chr11	+	129	1	Intergenic	novelGene_6328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACTACTAAAAGCATGAC	2058	False	NA	NA	False	NA	NA	NA	101041940	101042069	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101041900_101042100
m54284U_201217_021426/43451219/ccs	chrX	-	212	1	Intergenic	novelGene_9471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACAGTGACATGAAAAC	NA	False	NA	NA	False	NA	NA	NA	56121233	56121021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_56121000_56121200
m54284U_201217_021426/43452887/ccs	chr14	+	178	1	Intergenic	novelGene_7359	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTGAAAAAGAGAAAGAAGA	2788	False	NA	NA	False	NA	NA	NA	25754206	25754384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_25754200_25754400
m54284U_201217_021426/43583554/ccs	chr3	+	186	1	Intergenic	novelGene_1665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAACACGAAAATATAAGC	NA	False	NA	NA	False	NA	NA	NA	122209600	122209786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_122209600_122209800
m54284U_201217_021426/43647680/ccs	chr11	+	178	1	Intergenic	novelGene_6520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	120817629	120817807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_120817600_120817800
m54284U_201217_021426/43713861/ccs	chr8	-	4005	7	NNC	ENSMUSG00000031651.6	novel	1850	6	NA	NA	-38802	0	intron_retention	FALSE	canonical	3	90	junction_5	53.2968625301298	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTTTATTGCTTTCTG	NA	False	NA	0	True	TATAAA	-19	NA	43633325	43582843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr8_-_43583726_43589312_43591835_43593679_43593776_43594003_43594341_43595725_43595759_43618053_43618097_43633233
m54284U_201217_021426/43715259/ccs	chr2	-	167	1	Intergenic	novelGene_639	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTAAAAAATGTGTAT	NA	False	NA	NA	False	NA	NA	NA	25792790	25792623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_25792600_25792800
m54284U_201217_021426/43780090/ccs	chr2	+	171	1	Intergenic	novelGene_1284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAACCAACA	NA	False	NA	NA	False	NA	NA	NA	170836283	170836454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_170836300_170836500
m54284U_201217_021426/43911906/ccs	chr13	+	167	1	Intergenic	novelGene_7035	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGAAATTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	42514234	42514401	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_42514200_42514400
m54284U_201217_021426/43977460/ccs	chr11	+	180	1	Intergenic	novelGene_5683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAAAACCCAAAACTTT	NA	False	NA	NA	False	NA	NA	NA	5694844	5695024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_5694800_5695000
m54284U_201217_021426/44042748/ccs	chr11	-	171	1	Intergenic	novelGene_6278	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGGATTTTGATC	7745	False	NA	NA	False	NA	NA	NA	97525416	97525245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97525200_97525400
m54284U_201217_021426/44171975/ccs	chr13	-	182	1	Intergenic	novelGene_7098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAAATCTTTTTTA	9803	False	NA	NA	False	NA	NA	NA	55422458	55422276	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55422300_55422500
m54284U_201217_021426/44172760/ccs	chr17	-	6882	1	NIC	ENSMUSG00000092074.3	novel	3321	5	NA	NA	-7	-2550	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGTTCCTTGTAGC	NA	False	NA	NA	False	AATAAA	-16	NA	6367700	6360818	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_6360800_6367700
m54284U_201217_021426/44237155/ccs	chr6	+	175	1	Intergenic	novelGene_3393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAAAATCAGAAAC	2221	False	NA	NA	False	NA	NA	NA	93454544	93454719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_93454500_93454700
m54284U_201217_021426/44239694/ccs	chr2	-	219	1	Intergenic	novelGene_1196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACAGAATGAACACCCA	NA	False	NA	NA	False	NA	NA	NA	157662601	157662382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_157662400_157662600
m54284U_201217_021426/44303982/ccs	chr15	-	176	1	Intergenic	novelGene_7662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTAAGCCACTTA	NA	False	NA	NA	False	NA	NA	NA	28030741	28030565	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_28030600_28030700
m54284U_201217_021426/4458701/ccs	chr17	-	169	1	Intergenic	novelGene_8782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGGAGGAGGAGGAGGA	NA	False	NA	NA	False	NA	NA	NA	88410751	88410582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_88410600_88410800
m54284U_201217_021426/4459274/ccs	chr17	+	242	1	Intergenic	novelGene_8394	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACTTATTCTTGCAGAG	11	False	NA	NA	False	NA	NA	NA	23808077	23808319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_23808100_23808300
m54284U_201217_021426/44696039/ccs	chr8	+	173	1	Intergenic	novelGene_4502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTTGTTTTTGACA	NA	False	NA	NA	False	NA	NA	NA	111975256	111975429	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111975300_111975400
m54284U_201217_021426/44828481/ccs	chr4	-	184	1	Intergenic	novelGene_2286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATCAAAAACATTTCTA	NA	False	NA	NA	False	NA	NA	NA	139006964	139006780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_139006800_139007000
m54284U_201217_021426/44829278/ccs	chr9	-	208	1	Intergenic	novelGene_5137	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTTCAAGGTTAGCC	NA	False	NA	NA	False	NA	NA	NA	118191417	118191209	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_118191200_118191400
m54284U_201217_021426/44829332/ccs	chr17	-	192	1	Intergenic	novelGene_8575	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCACTGACCACAGCCGGG	2171	False	NA	NA	False	NA	NA	NA	36188070	36187878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_36187900_36188100
m54284U_201217_021426/44894383/ccs	chr17	-	182	1	Intergenic	novelGene_8380	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTTAGTTTAAAAAAAAAA	6240	False	NA	NA	False	NA	NA	NA	15800847	15800665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_15800700_15800800
m54284U_201217_021426/44958247/ccs	chr9	+	268	1	Intergenic	novelGene_4836	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATTAAAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	59885788	59886056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59885800_59886100
m54284U_201217_021426/44960468/ccs	chr9	-	164	1	Intergenic	novelGene_5098	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTATATAATTGGGAGT	NA	False	NA	NA	False	AAGAAA	-4	NA	109760350	109760186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_109760200_109760400
m54284U_201217_021426/45090788/ccs	chr4	+	177	1	Intergenic	novelGene_1782	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	32849448	32849625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_32849400_32849600
m54284U_201217_021426/45154304/ccs	chr5	-	161	1	Intergenic	novelGene_2561	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTTCTAGGCAAAAG	NA	False	NA	NA	False	NA	NA	NA	37048743	37048582	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_37048600_37048700
m54284U_201217_021426/4523364/ccs	chr10	+	189	1	Intergenic	novelGene_5469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	81352528	81352717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_81352500_81352700
m54284U_201217_021426/45416553/ccs	chr11	-	195	1	Intergenic	novelGene_6271	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTTGCTCTCTGGCAA	NA	False	NA	NA	False	NA	NA	NA	97213768	97213573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_97213600_97213800
m54284U_201217_021426/45417060/ccs	chr2	+	247	1	Intergenic	novelGene_708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTCCTTATAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	31799134	31799381	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_31799100_31799400
m54284U_201217_021426/45417371/ccs	chr11	-	189	1	Intergenic	novelGene_5866	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACCTTTTAAGCCTAAAA	NA	False	NA	NA	False	NA	NA	NA	58061546	58061357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_58061400_58061500
m54284U_201217_021426/45418178/ccs	chrX	-	187	1	Intergenic	novelGene_9396	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCCAGACTGTCTTTG	NA	False	NA	NA	False	NA	NA	NA	13094437	13094250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_13094200_13094400
m54284U_201217_021426/45418734/ccs	chr9	-	185	1	Intergenic	novelGene_4935	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAATAAAATATAA	NA	False	NA	NA	False	NA	NA	NA	72591303	72591118	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72591100_72591300
m54284U_201217_021426/45418799/ccs	chr12	-	197	1	Intergenic	novelGene_6583	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATACTTAGGAAGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	19356733	19356536	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_19356500_19356700
m54284U_201217_021426/45549306/ccs	chr5	-	135	1	Intergenic	novelGene_2588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACCAAAAAAGTAAAAA	4630	False	NA	NA	False	NA	NA	NA	65693582	65693447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_65693400_65693600
m54284U_201217_021426/45550362/ccs	chr11	-	235	1	Intergenic	novelGene_5810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTGAAGCTAGCCTGAA	NA	False	NA	NA	False	NA	NA	NA	51699748	51699513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_51699500_51699700
m54284U_201217_021426/45613865/ccs	chr18	-	179	1	Intergenic	novelGene_8946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTTCCTACCACTGTTAT	4060	False	NA	NA	False	NA	NA	NA	46443648	46443469	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_46443500_46443600
m54284U_201217_021426/45679393/ccs	chr12	-	192	2	Intergenic	novelGene_6916	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	395	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGGAGATGGCTCAGTG	7270	False	NA	NA	False	NA	NA	NA	111531322	111516199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111516343_111531273
m54284U_201217_021426/45680946/ccs	chr11	-	194	1	Intergenic	novelGene_6467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACATTTTGGGCAGGTG	9132	False	NA	NA	False	NA	NA	NA	116003586	116003392	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116003400_116003600
m54284U_201217_021426/45877796/ccs	chr18	-	198	1	Intergenic	novelGene_8814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAATAAAGGTAGATGGAG	NA	False	NA	NA	False	NA	NA	NA	11744890	11744692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_11744700_11744900
m54284U_201217_021426/4589729/ccs	chr11	+	180	1	Intergenic	novelGene_5902	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCCTGCATTGAT	NA	False	NA	NA	False	NA	NA	NA	61831445	61831625	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_61831400_61831600
m54284U_201217_021426/4589928/ccs	chr9	-	160	1	ISM	ENSMUSG00000090925.3	ENSMUST00000188595.2	2307	2	6920	0	1606	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAGCTTTTAATTTT	NA	False	NA	NA	False	NA	NA	NA	22118236	22118076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_-_22118100_22118200
m54284U_201217_021426/4590098/ccs	chr10	-	180	1	Intergenic	novelGene_5222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATTTATTTTCTG	NA	False	NA	NA	False	NA	NA	NA	20802985	20802805	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_20802800_20803000
m54284U_201217_021426/45941163/ccs	chr3	-	170	1	Intergenic	novelGene_1387	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	37445459	37445289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_37445300_37445500
m54284U_201217_021426/459486/ccs	chr4	-	182	1	Intergenic	novelGene_2181	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTGTTTAAAAGCACTATA	NA	False	NA	NA	False	NA	NA	NA	131760798	131760616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_131760600_131760800
m54284U_201217_021426/459684/ccs	chr2	-	189	1	Intergenic	novelGene_1183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCGCTAGACAAGTCTTA	NA	False	NA	NA	False	NA	NA	NA	156667164	156666975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_156667000_156667200
m54284U_201217_021426/46006457/ccs	chr3	-	168	1	Intergenic	novelGene_1429	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGGACAACTGTG	2112	False	NA	NA	False	NA	NA	NA	69287841	69287673	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_69287700_69287800
m54284U_201217_021426/46007124/ccs	chr2	-	193	1	Intergenic	novelGene_589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGGTTCGCTAAGGAA	NA	False	NA	NA	False	NA	NA	NA	10008132	10007939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_10007900_10008100
m54284U_201217_021426/460271/ccs	chr19	+	191	1	Intergenic	novelGene_9149	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	373	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACTGAGACACAGACAAA	77	False	NA	NA	False	NA	NA	NA	8756810	8757001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_8756800_8757000
m54284U_201217_021426/46073381/ccs	chr14	+	171	1	Intergenic	novelGene_7517	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	66248259	66248430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_66248300_66248400
m54284U_201217_021426/46073583/ccs	chr5	-	212	1	Intergenic	novelGene_2783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTGAACTTGACTCCACT	NA	False	NA	NA	False	NA	NA	NA	114052045	114051833	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_114051800_114052000
m54284U_201217_021426/46074314/ccs	chr1	-	199	1	Intergenic	novelGene_410	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGGGAAACTGAATAATCT	5667	False	NA	NA	False	NA	NA	NA	156425248	156425049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_156425000_156425200
m54284U_201217_021426/461233/ccs	chr3	-	177	1	Intergenic	novelGene_1480	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAAGATAGA	NA	False	NA	NA	False	NA	NA	NA	88180156	88179979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88180000_88180200
m54284U_201217_021426/46137905/ccs	chr6	-	187	1	Intergenic	novelGene_3545	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGCTTTAAACTTATAA	NA	False	NA	NA	False	NA	NA	NA	134524883	134524696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_134524700_134524900
m54284U_201217_021426/46137906/ccs	chr12	-	175	1	Intergenic	novelGene_6738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAGATTAAAATATT	NA	False	NA	NA	False	NA	NA	NA	76877727	76877552	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_76877600_76877700
m54284U_201217_021426/46140039/ccs	chr11	-	170	1	Intergenic	novelGene_6231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGGAGCAAGTGGGGTT	NA	False	NA	NA	False	NA	NA	NA	95599885	95599715	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95599700_95599900
m54284U_201217_021426/46203857/ccs	chr13	-	195	1	Intergenic	novelGene_6972	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAATACCTGACTCAA	NA	False	NA	NA	False	NA	NA	NA	14009481	14009286	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_14009300_14009500
m54284U_201217_021426/46205458/ccs	chr5	-	186	1	Intergenic	novelGene_2824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAGGAATTTTGTGC	NA	False	NA	NA	False	NA	NA	NA	117641645	117641459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_117641500_117641600
m54284U_201217_021426/46268478/ccs	chr11	-	181	1	Intergenic	novelGene_5724	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAATAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21214470	21214289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_21214300_21214500
m54284U_201217_021426/46270942/ccs	chr1	-	1586	1	FSM	ENSMUSG00000025902.14	ENSMUST00000192505.2	1148	1	1088	-1526	1088	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTTTAGTATGTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	4562739	4561153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_4561200_4562700
m54284U_201217_021426/46336535/ccs	chr11	-	195	2	Intergenic	novelGene_5924	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCACGCAAGCCACAACCA	NA	False	NA	NA	False	NA	NA	NA	68731634	68472999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68473145_68731584
m54284U_201217_021426/46336834/ccs	chr7	-	198	1	Intergenic	novelGene_4152	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCATGGTGAGGTCAC	2981	False	NA	NA	False	TTTAAA	-3	NA	140504448	140504250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_140504200_140504400
m54284U_201217_021426/46533462/ccs	chr7	+	257	1	Intergenic	novelGene_4119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAACATAACAAATAATAA	NA	False	NA	NA	False	NA	NA	NA	129991654	129991911	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_129991700_129991900
m54284U_201217_021426/4654582/ccs	chr17	-	187	1	Intergenic	novelGene_8672	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGCCTGCTACATAGGA	NA	False	NA	NA	False	NA	NA	NA	63838994	63838807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_63838800_63839000
m54284U_201217_021426/4655327/ccs	chr17	-	214	1	Intergenic	novelGene_8679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGGCAACAACAACAGCAACA	NA	False	NA	NA	False	NA	NA	NA	66177264	66177050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66177000_66177300
m54284U_201217_021426/46661948/ccs	chr11	-	190	1	Intergenic	novelGene_5961	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGAAGCAGCCAGCCGA	9147	False	NA	NA	False	NA	NA	NA	70372814	70372624	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_70372600_70372800
m54284U_201217_021426/46730060/ccs	chr16	-	181	1	Intergenic	novelGene_8028	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGCTTAGAAAGTAGATT	NA	False	NA	NA	False	NA	NA	NA	3913705	3913524	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_3913500_3913700
m54284U_201217_021426/46792858/ccs	chr6	-	171	1	Intergenic	novelGene_3116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGTAGCAATGTG	3683	False	NA	NA	False	NA	NA	NA	22388386	22388215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_22388200_22388400
m54284U_201217_021426/46793148/ccs	chr16	-	177	1	Intergenic	novelGene_8289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAGTAACACATGACT	NA	False	NA	NA	False	NA	NA	NA	61571734	61571557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_61571600_61571700
m54284U_201217_021426/46795090/ccs	chrX	+	250	1	Intergenic	novelGene_9389	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAATAAAAAAAGTGAG	NA	False	NA	NA	False	NA	NA	NA	12630622	12630872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_12630600_12630900
m54284U_201217_021426/46859502/ccs	chr15	+	138	1	Intergenic	novelGene_7936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	98432491	98432629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98432500_98432600
m54284U_201217_021426/46860510/ccs	chr12	-	191	1	Intergenic	novelGene_6929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAACCTTTTGGGCTGGTG	3544	False	NA	NA	False	NA	NA	NA	111709657	111709466	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111709500_111709700
m54284U_201217_021426/46989336/ccs	chr8	+	184	1	Intergenic	novelGene_4258	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGAGTCCCACTCGCT	NA	False	NA	NA	False	NA	NA	NA	34002840	34003024	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_34002800_34003000
m54284U_201217_021426/47121925/ccs	chrY	-	191	1	Intergenic	novelGene_9739	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTATTGTGTTCCAAAT	NA	False	NA	NA	False	NA	NA	NA	4413653	4413462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrY_-_4413500_4413700
m54284U_201217_021426/47188075/ccs	chr17	+	170	1	Intergenic	novelGene_8680	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACTCACTATGACTTTC	NA	False	NA	NA	False	NA	NA	NA	66205195	66205365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_66205200_66205400
m54284U_201217_021426/47188396/ccs	chr4	+	226	1	Intergenic	novelGene_2029	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAACAAACAAACAA	1337	False	NA	NA	False	NA	NA	NA	116652858	116653084	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116652900_116653100
m54284U_201217_021426/4721279/ccs	chr3	+	255	1	FSM	ENSMUSG00000105388.2	ENSMUST00000197973.2	321	1	125	-59	125	59	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTCTCTCACAGAGGACC	8426	False	NA	NA	False	AATAAA	-34	NA	145584899	145585154	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_145584900_145585200
m54284U_201217_021426/4721451/ccs	chr8	-	232	1	Intergenic	novelGene_4520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAGTCACAGAATG	NA	False	NA	NA	False	NA	NA	NA	112651221	112650989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_112651000_112651200
m54284U_201217_021426/4721495/ccs	chr14	-	196	1	Intergenic	novelGene_7559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGCATCTCCTCTCT	9712	False	NA	NA	False	NA	NA	NA	79652448	79652252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_79652300_79652400
m54284U_201217_021426/47251959/ccs	chr6	-	190	1	Intergenic	novelGene_3310	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAGACTATCTATGCACA	7784	False	NA	NA	False	NA	NA	NA	67230123	67229933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_67229900_67230100
m54284U_201217_021426/47318837/ccs	chr19	-	222	1	Intergenic	novelGene_9158	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCTAGTTTGGGCTGGA	1777	False	NA	NA	False	TTTAAA	-7	NA	10120194	10119972	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_10120000_10120200
m54284U_201217_021426/47319063/ccs	chrX	-	186	1	Intergenic	novelGene_9591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTAGCCTCTGCTGTGC	NA	False	NA	NA	False	NA	NA	NA	103011216	103011030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_103011000_103011200
m54284U_201217_021426/47382840/ccs	chr19	+	190	1	Intergenic	novelGene_9151	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTTAAAAAAAAAAGAGTC	2364	False	NA	NA	False	NA	NA	NA	8773427	8773617	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_8773400_8773600
m54284U_201217_021426/47513957/ccs	chr7	-	6863	1	Antisense	novelGene_ENSMUSG00000058325.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAAAAAAAACCAAAAA	NA	False	NA	NA	False	TATAAA	-28	NA	134344532	134337669	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_134337700_134344500
m54284U_201217_021426/47516010/ccs	chr8	-	3188	1	NIC	ENSMUSG00000031523.17	novel	6159	14	NA	NA	-8	-17464	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCCTAAAGGGCTCCAGA	NA	False	NA	NA	False	NA	NA	NA	37081036	37077848	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_37077800_37081000
m54284U_201217_021426/47644824/ccs	chr3	-	186	1	Intergenic	novelGene_1681	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAACAAGGACTTTTA	NA	False	NA	NA	False	NA	NA	NA	129483322	129483136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_129483100_129483300
m54284U_201217_021426/47711224/ccs	chr15	-	174	1	Intergenic	novelGene_7905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAACAATTAAT	NA	False	NA	NA	False	NA	NA	NA	89281989	89281815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_89281800_89282000
m54284U_201217_021426/47776903/ccs	chr18	-	192	1	Intergenic	novelGene_9002	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAATCTGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	67755815	67755623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_67755600_67755800
m54284U_201217_021426/47776937/ccs	chr11	-	208	1	Intergenic	novelGene_5828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	162	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGAAGAAGGAGG	NA	False	NA	NA	False	NA	NA	NA	53204147	53203939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_53203900_53204100
m54284U_201217_021426/4784260/ccs	chr12	-	226	1	Intergenic	novelGene_6559	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGATGAAATATGTATCT	NA	False	NA	NA	False	NA	NA	NA	8818534	8818308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_8818300_8818500
m54284U_201217_021426/4786372/ccs	chr15	-	176	1	Intergenic	novelGene_7865	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	6807	False	NA	NA	False	NA	NA	NA	82981076	82980900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_82980900_82981100
m54284U_201217_021426/47907964/ccs	chr17	-	1048	1	FSM	ENSMUSG00000117438.2	ENSMUST00000234808.2	885	1	-77	-86	-77	86	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAACAATTCTCAAATT	NA	False	NA	NA	False	AATAAA	-34	NA	82718325	82717277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr17_-_82717300_82718300
m54284U_201217_021426/47974558/ccs	chr9	+	383	1	ISM	ENSMUSG00000035202.9	ENSMUST00000038863.9	3894	21	94873	482	7010	283	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGCTAGCTTGTGTCTCC	NA	False	NA	NA	False	NA	NA	NA	123290864	123291247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr9_+_123290900_123291200
m54284U_201217_021426/48039258/ccs	chr2	-	176	1	Intergenic	novelGene_1110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCAGAAAAGAATC	5833	False	NA	NA	False	NA	NA	NA	150602698	150602522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_150602500_150602700
m54284U_201217_021426/48039506/ccs	chr5	+	179	1	Intergenic	novelGene_2668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAATCTAAAGAT	NA	False	NA	NA	False	NA	NA	NA	92267335	92267514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_92267300_92267500
m54284U_201217_021426/48170726/ccs	chr5	-	174	1	Intergenic	novelGene_3053	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAATGAGTGAAGA	NA	False	NA	NA	False	NA	NA	NA	144290820	144290646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_144290600_144290800
m54284U_201217_021426/48237014/ccs	chr2	-	186	1	Intergenic	novelGene_857	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATCTATGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	72825215	72825029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_72825000_72825200
m54284U_201217_021426/48301093/ccs	chr17	-	189	1	Intergenic	novelGene_8571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACATACAAAAGCCCTGG	7342	False	NA	NA	False	NA	NA	NA	36025370	36025181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_36025200_36025400
m54284U_201217_021426/48367702/ccs	chrX	-	215	1	Intergenic	novelGene_9579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTTTTCTTGTGCTTCA	NA	False	NA	NA	False	NA	NA	NA	102261359	102261144	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_102261100_102261400
m54284U_201217_021426/48431770/ccs	chr15	-	190	1	Intergenic	novelGene_7837	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTAACTGCAGAGCCA	NA	False	NA	NA	False	NA	NA	NA	81330931	81330741	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81330700_81330900
m54284U_201217_021426/48433683/ccs	chr12	-	198	1	Intergenic	novelGene_6550	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGCTCTGTTGTTATT	NA	False	NA	NA	False	NA	NA	NA	4633693	4633495	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_4633500_4633700
m54284U_201217_021426/48496864/ccs	chrX	-	176	1	Intergenic	novelGene_9692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGAATTTTGA	NA	False	NA	NA	False	NA	NA	NA	156218945	156218769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_156218800_156218900
m54284U_201217_021426/4851471/ccs	chr5	-	1063	1	Intergenic	novelGene_2554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGGAAAAGGAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	34743359	34742296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_34742300_34743400
m54284U_201217_021426/4851518/ccs	chr13	-	211	1	Intergenic	novelGene_7263	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCCGTTTTGTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	97296456	97296245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_97296200_97296500
m54284U_201217_021426/48562211/ccs	chr1	+	169	1	Intergenic	novelGene_436	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAAAGC	9302	False	NA	NA	False	NA	NA	NA	161160288	161160457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_161160300_161160500
m54284U_201217_021426/48563868/ccs	chr15	-	165	1	Intergenic	novelGene_7906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	89299337	89299172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_89299200_89299300
m54284U_201217_021426/48627713/ccs	chr11	-	258	1	Intergenic	novelGene_6104	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCAAAGTAAAACGTAAGA	NA	False	NA	NA	False	NA	NA	NA	80041860	80041602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80041600_80041900
m54284U_201217_021426/48761694/ccs	chr10	-	192	1	Intergenic	novelGene_5556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGTCTTTCAAGAGGCT	NA	False	NA	NA	False	NA	NA	NA	117494323	117494131	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_117494100_117494300
m54284U_201217_021426/48825015/ccs	chr4	-	173	1	Intergenic	novelGene_2064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAATAAAAAACAA	9763	False	NA	NA	False	NA	NA	NA	119247400	119247227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_119247200_119247400
m54284U_201217_021426/48826428/ccs	chr15	-	191	1	Intergenic	novelGene_7633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGTCTATAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	9191574	9191383	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_9191400_9191600
m54284U_201217_021426/48890468/ccs	chr12	-	218	1	Intergenic	novelGene_6800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	544	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAGAAGGAAGGAATTG	NA	False	NA	NA	False	NA	NA	NA	84451401	84451183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_84451200_84451400
m54284U_201217_021426/49021497/ccs	chr6	-	194	1	Intergenic	novelGene_3133	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGGTAAGGAGTGCTAGG	NA	False	NA	NA	False	NA	NA	NA	29675960	29675766	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_29675800_29676000
m54284U_201217_021426/49021598/ccs	chr1	-	133	1	Antisense	novelGene_ENSMUSG00000103403.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATATGTGATCCCTGTCC	NA	False	NA	NA	False	NA	NA	NA	74347265	74347132	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_74347100_74347300
m54284U_201217_021426/49021950/ccs	chr19	-	178	1	Intergenic	novelGene_9075	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAATTTTTTATTTTA	6392	False	NA	NA	False	NA	NA	NA	4072112	4071934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4071900_4072100
m54284U_201217_021426/49023284/ccs	chr4	+	2068	1	NIC	ENSMUSG00000023286.17	novel	1309	7	NA	NA	0	-3213	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACAGGAAAATGTATG	757	False	NA	NA	False	NA	NA	NA	156028287	156030355	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_156028300_156030400
m54284U_201217_021426/49023493/ccs	chr16	-	174	1	Intergenic	novelGene_8116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAAGTGACCCTT	NA	False	NA	NA	False	NA	NA	NA	18115168	18114994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18115000_18115200
m54284U_201217_021426/49087148/ccs	chr2	-	165	1	Intergenic	novelGene_1323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAACACAAGAA	NA	False	NA	NA	False	NA	NA	NA	180971348	180971183	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_180971200_180971300
m54284U_201217_021426/49088190/ccs	chr4	+	1200	4	Fusion	ENSMUSG00000078496.10_ENSMUSG00000087207.9	novel	585	4	NA	NA	0	-3801	multi-exon	FALSE	canonical	2	16	junction_2	38.5774833578115	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCATCCGTTATTTCTGC	4110	False	NA	12	True	AAGAAA	-15	NA	147314740	147594076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Fusion_chr4_+_147314893_147447267_147447362_147592042_147592098_147593177
m54284U_201217_021426/49089110/ccs	chr1	-	180	1	Intergenic	novelGene_531	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAGGGATTTGTACAAA	NA	False	NA	NA	False	NA	NA	NA	182186392	182186212	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_182186200_182186400
m54284U_201217_021426/4917483/ccs	chr9	+	2519	1	Genic_Genomic	ENSMUSG00000032215.16	novel	NA	NA	NA	NA	7825	1606	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTGCATTTGTTTA	NA	False	NA	NA	False	CATAAA	-19	NA	73029702	73032221	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_+_73029700_73032200
m54284U_201217_021426/49284171/ccs	chr3	-	225	1	Intergenic	novelGene_1658	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTCTGCTCTCACGAG	NA	False	NA	NA	False	AATAAA	-24	NA	121498176	121497951	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_121498000_121498200
m54284U_201217_021426/49284797/ccs	chr6	+	172	1	Intergenic	novelGene_3130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATTTTAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	29604333	29604505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_29604300_29604500
m54284U_201217_021426/49285408/ccs	chr18	-	176	1	Intergenic	novelGene_8930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGGAGGAATATT	NA	False	NA	NA	False	NA	NA	NA	40369703	40369527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_40369500_40369700
m54284U_201217_021426/49285786/ccs	chr12	+	178	1	Intergenic	novelGene_6692	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATAATGTGGAGGCTGA	NA	False	NA	NA	False	NA	NA	NA	70266749	70266927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_70266700_70266900
m54284U_201217_021426/49349783/ccs	chr6	-	200	1	Intergenic	novelGene_3276	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGTATCCACTTATAC	5503	False	NA	NA	False	NA	NA	NA	52308001	52307801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_52307800_52308000
m54284U_201217_021426/49350038/ccs	chr7	+	173	1	Intergenic	novelGene_3626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGCAGCTAAAAAA	NA	False	NA	3	True	NA	NA	NA	4164815	4164988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_4164800_4165000
m54284U_201217_021426/49480322/ccs	chr12	+	197	1	Intergenic	novelGene_6903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATTCTTCAGACAGAG	NA	False	NA	NA	False	NA	NA	NA	110865328	110865525	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_110865300_110865500
m54284U_201217_021426/49481119/ccs	chr4	-	196	1	Intergenic	novelGene_1905	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGAACCTCTATAGTTC	NA	False	NA	NA	False	NA	NA	NA	74205460	74205264	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_74205300_74205500
m54284U_201217_021426/49545509/ccs	chr18	-	185	1	Intergenic	novelGene_9059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCTTTACAGAAAACTC	NA	False	NA	NA	False	NA	NA	NA	85730181	85729996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_85730000_85730200
m54284U_201217_021426/49545614/ccs	chr10	-	189	1	Intergenic	novelGene_5241	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCATAGTGAGGATCCTC	NA	False	NA	NA	False	NA	NA	NA	28919014	28918825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_28918800_28919000
m54284U_201217_021426/49546887/ccs	chr2	+	174	1	Intergenic	novelGene_1095	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTTTAAAAAAAAAGCCTA	NA	False	NA	NA	False	NA	NA	NA	142734694	142734868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_142734700_142734900
m54284U_201217_021426/49678881/ccs	chr6	+	253	1	Intergenic	novelGene_3299	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAAGTCATCTTTTATG	NA	False	NA	NA	False	NA	NA	NA	64981874	64982127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_64981900_64982100
m54284U_201217_021426/4982988/ccs	chr3	-	176	1	Intergenic	novelGene_1443	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCTACCCCCGCCAA	NA	False	NA	NA	False	NA	NA	NA	79488613	79488437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_79488400_79488600
m54284U_201217_021426/49873987/ccs	chr3	+	4704	1	Genic_Genomic	ENSMUSG00000037211.13	novel	NA	NA	NA	NA	-52	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGAGTGCATCTTTTTTT	NA	False	NA	NA	False	AATATA	-19	NA	37694043	37698747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr3_+_37694000_37698700
m54284U_201217_021426/49874594/ccs	chr1	+	222	1	Intergenic	novelGene_230	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAGGAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	86401939	86402161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_86401900_86402200
m54284U_201217_021426/49874757/ccs	chr11	+	188	1	Intergenic	novelGene_6160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATGTTCTCTGAACAG	NA	False	NA	NA	False	NA	NA	NA	86753232	86753420	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_86753200_86753400
m54284U_201217_021426/49941314/ccs	chr7	-	208	1	Antisense	novelGene_ENSMUSG00000097017.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	181	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAGACCAGGGATT	NA	False	NA	NA	False	NA	NA	NA	25517971	25517763	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_25517800_25518000
m54284U_201217_021426/50004222/ccs	chr9	+	133	1	Intergenic	novelGene_4735	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAACAAAACTATATTT	NA	False	NA	NA	False	NA	NA	NA	44363402	44363535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_44363400_44363500
m54284U_201217_021426/50004292/ccs	chr15	-	4310	11	NIC	ENSMUSG00000055065.8	novel	4726	13	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	25.8110441478062	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGAATTTTTTATTACA	NA	False	NA	-40	True	AATAAA	-15	NA	79430760	79411936	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79427906_79428058_79430395
m54284U_201217_021426/50004473/ccs	chr11	-	137	1	Intergenic	novelGene_5962	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGGAGGCAGAGT	9472	False	NA	NA	False	AATAAA	-28	NA	70397669	70397532	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_70397500_70397700
m54284U_201217_021426/50072131/ccs	chr13	+	180	1	Intergenic	novelGene_6998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGACCATGCCATAT	NA	False	NA	2	True	NA	NA	NA	24960678	24960858	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_24960700_24960900
m54284U_201217_021426/50202487/ccs	chr5	+	198	1	Intergenic	novelGene_2510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGATCAATTCACACTC	1444	False	NA	NA	False	NA	NA	NA	30222409	30222607	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_30222400_30222600
m54284U_201217_021426/50268953/ccs	chr15	+	202	1	Intergenic	novelGene_7812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATTAAAACCCATTTAAAA	4274	False	NA	NA	False	NA	NA	NA	79433257	79433459	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_79433300_79433500
m54284U_201217_021426/50399298/ccs	chr7	-	640	1	FSM	ENSMUSG00000083626.2	ENSMUST00000118750.2	468	1	-3	-169	-3	169	mono-exon	FALSE	NA	NA	NA	NA	NA	405	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTTGGAAACAGTCTAAA	NA	False	NA	NA	False	AATAAA	-41	NA	139240074	139239434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_139239400_139240100
m54284U_201217_021426/5048953/ccs	chr2	+	197	1	Intergenic	novelGene_605	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGTCAGATCATATGAA	NA	False	NA	NA	False	NA	NA	NA	18122321	18122518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_18122300_18122500
m54284U_201217_021426/50530139/ccs	chrX	-	189	1	Intergenic	novelGene_9687	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAGAAATTTAAAAAAA	5893	False	NA	NA	False	NA	NA	NA	153256984	153256795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_153256800_153257000
m54284U_201217_021426/50595561/ccs	chrX	-	185	1	Intergenic	novelGene_9373	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATTATGTCAAA	8365	False	NA	NA	False	AATAAA	-7	NA	8082103	8081918	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_8081900_8082100
m54284U_201217_021426/50727472/ccs	chr12	-	189	1	Intergenic	novelGene_6588	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTCATCCTAGCTGCCT	NA	False	NA	NA	False	NA	NA	NA	21486881	21486692	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_21486700_21486900
m54284U_201217_021426/50791924/ccs	chr18	-	110	1	Intergenic	novelGene_9060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTAAGCACCAATAGCT	NA	False	NA	NA	False	NA	NA	NA	89243867	89243757	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_89243800_89243900
m54284U_201217_021426/50792687/ccs	chr17	-	188	1	Intergenic	novelGene_8444	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGATGGAAACTCAATC	NA	False	NA	NA	False	NA	NA	NA	27217366	27217178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_27217200_27217400
m54284U_201217_021426/50856007/ccs	chr11	-	186	1	Intergenic	novelGene_5985	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAGACCAACCAAACC	NA	False	NA	NA	False	NA	NA	NA	73049093	73048907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_73048900_73049100
m54284U_201217_021426/50987535/ccs	chrX	-	344	1	FSM	ENSMUSG00000084830.3	ENSMUST00000117527.2	174	1	-54	-116	-54	116	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGATAAACAATTTAAA	NA	False	NA	NA	False	AATAAA	-21	NA	20447607	20447263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_20447300_20447600
m54284U_201217_021426/50987932/ccs	chr9	+	204	1	Intergenic	novelGene_5023	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATGAAACCATCGACT	NA	False	NA	NA	False	NA	NA	NA	97062150	97062354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_97062200_97062400
m54284U_201217_021426/50989770/ccs	chr5	-	185	1	Intergenic	novelGene_2452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCTGGTCTAACTGGAT	NA	False	NA	NA	False	NA	NA	NA	3601073	3600888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_3600900_3601100
m54284U_201217_021426/51053518/ccs	chr11	-	148	1	Intergenic	novelGene_5936	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTGGAGCCAGTGTGGT	NA	False	NA	NA	False	NA	NA	NA	68904754	68904606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_68904600_68904800
m54284U_201217_021426/51055167/ccs	chr11	-	197	1	Intergenic	novelGene_6234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGGATCGGAACAGGT	NA	False	NA	NA	False	NA	NA	NA	95676006	95675809	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95675800_95676000
m54284U_201217_021426/51185343/ccs	chr9	-	229	1	Intergenic	novelGene_4673	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATAATTGGATCAAAG	8658	False	NA	NA	False	NA	NA	NA	22231433	22231204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_22231200_22231400
m54284U_201217_021426/51185345/ccs	chr7	+	127	1	Intergenic	novelGene_3805	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCCCAGTACTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	41238790	41238917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_41238800_41238900
m54284U_201217_021426/51249417/ccs	chr18	-	191	1	Intergenic	novelGene_8931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGACAAAGCATTT	NA	False	NA	NA	False	NA	NA	NA	40638863	40638672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_40638700_40638900
m54284U_201217_021426/51252027/ccs	chr7	-	197	1	Intergenic	novelGene_3930	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGCTGCCAGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	81081808	81081611	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_81081600_81081800
m54284U_201217_021426/51380863/ccs	chr1	+	266	1	Intergenic	novelGene_277	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATATAAAGAAACATCTG	NA	False	NA	NA	False	NA	NA	NA	119613593	119613859	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_119613600_119613900
m54284U_201217_021426/51382295/ccs	chr2	-	183	1	Intergenic	novelGene_1128	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTCAAATGGAGATGCTG	NA	False	NA	NA	False	NA	NA	NA	152695931	152695748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_152695700_152695900
m54284U_201217_021426/51446931/ccs	chr19	-	205	1	Intergenic	novelGene_9234	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCCTGAGAGCTTTGAG	NA	False	NA	NA	False	AAAAAG	-6	NA	36842006	36841801	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_36841800_36842000
m54284U_201217_021426/51511418/ccs	chr4	+	213	1	Intergenic	novelGene_2123	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGGGGGTTTTGAGAC	NA	False	NA	NA	False	NA	NA	NA	126725254	126725467	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_126725300_126725500
m54284U_201217_021426/51512361/ccs	chr8	+	184	1	Intergenic	novelGene_4304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGCCTTAGAGGAATT	NA	False	NA	NA	False	NA	NA	NA	64809906	64810090	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_64809900_64810100
m54284U_201217_021426/51644427/ccs	chr6	-	200	1	Intergenic	novelGene_3407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAAAAGAGTTACCAT	NA	False	NA	NA	False	NA	NA	NA	99271068	99270868	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_99270900_99271100
m54284U_201217_021426/51773504/ccs	chr1	-	217	1	Intergenic	novelGene_509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCATTCTCCTCT	NA	False	NA	NA	False	NA	NA	NA	180343160	180342943	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_180342900_180343200
m54284U_201217_021426/51774736/ccs	chr3	-	217	1	Intergenic	novelGene_1455	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTCCAACAATCAATAAAA	3257	False	NA	NA	False	NA	NA	NA	85884228	85884011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_85884000_85884200
m54284U_201217_021426/5177539/ccs	chr9	+	245	1	Intergenic	novelGene_4720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATACTTTTTGCAC	NA	False	NA	NA	False	NA	NA	NA	42997466	42997711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_42997500_42997700
m54284U_201217_021426/5179288/ccs	chr4	-	179	1	Intergenic	novelGene_2078	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTTTAAAAAAAGTTTTA	9325	False	NA	NA	False	NA	NA	NA	120970770	120970591	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_120970600_120970800
m54284U_201217_021426/51839630/ccs	chr10	+	195	1	Intergenic	novelGene_5553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAGAAATGCATTC	2511	False	NA	NA	False	NA	NA	NA	116968876	116969071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_116968900_116969100
m54284U_201217_021426/51905904/ccs	chr13	-	243	1	Intergenic	novelGene_7160	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGATATTCATGCCTTA	9487	False	NA	NA	False	AATAAA	-13	NA	64265549	64265306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_64265300_64265500
m54284U_201217_021426/51971409/ccs	chr11	+	7172	18	NNC	ENSMUSG00000003119.15	novel	5912	14	NA	NA	-296	975	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_14	38.9009032904971	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAGTCTATTAATCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	98093588	98170305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_+_98095237_98101189_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535_98140927_98154295_98154397_98155019_98155134_98158577_98158685_98168196
m54284U_201217_021426/51971602/ccs	chr9	-	190	1	Intergenic	novelGene_4901	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAAAGCGAGTTTCCT	NA	False	NA	NA	False	NA	NA	NA	66757616	66757426	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66757400_66757600
m54284U_201217_021426/52036959/ccs	chr9	-	207	1	Intergenic	novelGene_4870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGGTCTCACACATTTTAA	NA	False	NA	NA	False	NA	NA	NA	64618003	64617796	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_64617800_64618000
m54284U_201217_021426/52038412/ccs	chrX	-	190	1	Intergenic	novelGene_9696	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATCTTGAACCACAGAT	NA	False	NA	NA	False	NA	NA	NA	156435765	156435575	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_156435600_156435800
m54284U_201217_021426/52167229/ccs	chr10	-	178	1	Intergenic	novelGene_5636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATTTTTTTTAGTTAAA	3	True	NA	NA	False	NA	NA	NA	128549109	128548931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128548900_128549100
m54284U_201217_021426/52364782/ccs	chr14	+	158	1	Intergenic	novelGene_7493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAATCAATAAA	NA	False	NA	NA	False	NA	NA	NA	57970667	57970825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_57970700_57970800
m54284U_201217_021426/5242956/ccs	chr1	+	211	1	Intergenic	novelGene_385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGGTCACAGGTGTGC	NA	False	NA	NA	False	NA	NA	NA	153372938	153373149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_153372900_153373100
m54284U_201217_021426/52430101/ccs	chr11	-	251	1	Intergenic	novelGene_6094	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTCCTCTATCTTCTC	NA	False	NA	NA	False	AATAAA	-41	NA	79878823	79878572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79878600_79878800
m54284U_201217_021426/5244819/ccs	chr5	+	170	1	Intergenic	novelGene_2609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATGAAATGTCTT	NA	False	NA	NA	False	NA	NA	NA	72572761	72572931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_72572800_72572900
m54284U_201217_021426/52559929/ccs	chr12	-	166	1	Intergenic	novelGene_6884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTAAAAAAGGGGGGG	NA	False	NA	NA	False	NA	NA	NA	108325598	108325432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_108325400_108325600
m54284U_201217_021426/52626082/ccs	chr7	+	195	1	Intergenic	novelGene_3690	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGAGTCACCACACCTGA	9199	False	NA	NA	False	NA	NA	NA	19472499	19472694	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_19472500_19472700
m54284U_201217_021426/52756587/ccs	chr7	-	193	1	Intergenic	novelGene_3705	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAATATTAAAGGCGTG	NA	False	NA	NA	False	NA	NA	NA	24620162	24619969	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_24620000_24620200
m54284U_201217_021426/52822851/ccs	chr9	-	199	1	Intergenic	novelGene_4832	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATTAAAGAATTCAAGGG	NA	False	NA	NA	False	NA	NA	NA	59664450	59664251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_59664300_59664400
m54284U_201217_021426/52824782/ccs	chr6	+	185	1	Intergenic	novelGene_3306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGATGCTCAATTTGA	6555	False	NA	NA	False	NA	NA	NA	67152812	67152997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_67152800_67153000
m54284U_201217_021426/52954975/ccs	chr10	-	208	1	Intergenic	novelGene_5227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAGTATTTATTAT	NA	False	NA	NA	False	NA	NA	NA	23647905	23647697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_23647700_23647900
m54284U_201217_021426/53021395/ccs	chr1	+	220	1	Intergenic	novelGene_438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATACATGAAGATAAGAAT	NA	False	NA	NA	False	NA	NA	NA	161908755	161908975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_161908800_161909000
m54284U_201217_021426/53084688/ccs	chr17	+	208	1	Intergenic	novelGene_8697	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTCGCAGACACCTGCA	265	False	NA	NA	False	NA	NA	NA	71064369	71064577	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_71064400_71064600
m54284U_201217_021426/53085272/ccs	chr2	-	1693	1	Intergenic	novelGene_1004	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGGCGTGGCAGCGCA	NA	False	NA	NA	False	AAGAAA	-30	NA	119311014	119309321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_119309300_119311000
m54284U_201217_021426/5308692/ccs	chr4	+	191	1	Intergenic	novelGene_1908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAGAAGAAGAAGGAG	NA	False	NA	NA	False	NA	NA	NA	75780904	75781095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_75780900_75781100
m54284U_201217_021426/5309983/ccs	chr5	-	187	1	Intergenic	novelGene_3003	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCCCAGTACAGGGGAAT	NA	False	NA	0	True	NA	NA	NA	137762041	137761854	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_137761900_137762000
m54284U_201217_021426/53346807/ccs	chr16	+	177	1	Intergenic	novelGene_8165	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAATGGGAAATTT	17	True	NA	NA	False	NA	NA	NA	22892816	22892993	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_22892800_22893000
m54284U_201217_021426/53414022/ccs	chr13	-	1560	1	Antisense	novelGene_ENSMUSG00000021701.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7390	False	NA	NA	False	NA	NA	NA	110538062	110536502	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr13_-_110536500_110538100
m54284U_201217_021426/53479089/ccs	chr3	+	1882	1	FSM	ENSMUSG00000091421.4	ENSMUST00000169025.4	733	1	-120	-1029	-120	1029	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATGTGAGAGAGATGAA	NA	False	NA	NA	False	NA	NA	NA	92596612	92598494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_+_92596600_92598500
m54284U_201217_021426/53479224/ccs	chr13	-	206	2	Intergenic	novelGene_7104	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAGTATATATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	55855523	55538007	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_55538163_55855472
m54284U_201217_021426/53543823/ccs	chr16	-	201	1	Intergenic	novelGene_8231	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCCAGTGAAGATGCTCAT	NA	False	NA	NA	False	NA	NA	NA	33721460	33721259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_33721300_33721500
m54284U_201217_021426/53544311/ccs	chr19	+	183	1	Intergenic	novelGene_9357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	60854518	60854701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_60854500_60854700
m54284U_201217_021426/53545427/ccs	chr17	-	4931	19	NIC	ENSMUSG00000023972.11	novel	4235	20	NA	NA	0	0	intron_retention	FALSE	canonical	3	399	junction_14	42.2530589147617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTGTTAGACCCTTC	NA	False	NA	-20	True	AATAAA	-17	NA	46940430	46875396	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
m54284U_201217_021426/53608542/ccs	chr6	-	203	1	Intergenic	novelGene_3532	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAATTTTTGGTGGAGC	6686	False	NA	NA	False	NA	NA	NA	128507153	128506950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128507000_128507200
m54284U_201217_021426/53611000/ccs	chr13	-	182	1	Intergenic	novelGene_6967	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTATGAGACTCCACGA	NA	False	NA	NA	False	NA	NA	NA	12414689	12414507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_12414500_12414700
m54284U_201217_021426/53675527/ccs	chr2	-	180	1	Intergenic	novelGene_1298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCACATAATTATAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	174965490	174965310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_174965300_174965500
m54284U_201217_021426/53675657/ccs	chr4	+	184	1	Intergenic	novelGene_1875	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCATTGGCCAGCAGGC	NA	False	NA	NA	False	NA	NA	NA	56964094	56964278	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_56964100_56964300
m54284U_201217_021426/5374328/ccs	chr17	+	194	1	Intergenic	novelGene_8601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTATGGTGTGAC	1609	False	NA	NA	False	NA	NA	NA	45697036	45697230	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_45697000_45697200
m54284U_201217_021426/5375520/ccs	chr16	-	176	1	Intergenic	novelGene_8336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAGGAGTTAAC	NA	False	NA	NA	False	NA	NA	NA	97058989	97058813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_97058800_97059000
m54284U_201217_021426/5376365/ccs	chr18	+	183	1	Intergenic	novelGene_8813	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTAAGGAATACT	7317	False	NA	NA	False	NA	NA	NA	11640689	11640872	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_11640700_11640900
m54284U_201217_021426/53806849/ccs	chr15	-	219	1	Intergenic	novelGene_7840	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAACTAAGACAGGCAGC	7232	False	NA	NA	False	NA	NA	NA	81367652	81367433	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81367400_81367700
m54284U_201217_021426/53807338/ccs	chr17	+	180	1	Intergenic	novelGene_8738	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAGAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	80421306	80421486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_80421300_80421500
m54284U_201217_021426/53873241/ccs	chr18	-	184	1	Intergenic	novelGene_8843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAAGGATTTATT	NA	False	NA	NA	False	NA	NA	NA	24679182	24678998	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_24679000_24679200
m54284U_201217_021426/54003799/ccs	chr14	-	3583	1	NIC	ENSMUSG00000048922.19	novel	3568	15	NA	NA	-6539	-666	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGCTTCTGCCTTGAT	NA	False	NA	NA	False	NA	NA	NA	67941969	67938386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_67938400_67942000
m54284U_201217_021426/54067826/ccs	chr4	+	98	1	Intergenic	novelGene_1760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGATGGTTATGACCTC	NA	False	NA	NA	False	NA	NA	NA	16969579	16969677	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_16969600_16969700
m54284U_201217_021426/54069083/ccs	chrX	-	184	1	Intergenic	novelGene_9544	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAGACATCTGTCAGAAGG	NA	False	NA	NA	False	NA	NA	NA	94794574	94794390	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_94794400_94794600
m54284U_201217_021426/54069120/ccs	chr2	+	203	1	Intergenic	novelGene_1335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGGGAGTAGTTGGGT	NA	False	NA	NA	False	NA	NA	NA	181341757	181341960	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_181341800_181342000
m54284U_201217_021426/54132791/ccs	chr8	+	188	1	Intergenic	novelGene_4490	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAGATAGCAGGTTAG	9461	False	NA	NA	False	NA	NA	NA	111639311	111639499	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_111639300_111639500
m54284U_201217_021426/54133373/ccs	chr8	-	206	1	Intergenic	novelGene_4589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGCAAGCTGAGCA	NA	False	NA	NA	False	NA	NA	NA	124522794	124522588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124522600_124522800
m54284U_201217_021426/54133783/ccs	chrX	-	1085	1	FSM	ENSMUSG00000086691.3	ENSMUST00000121106.2	195	1	-73	-817	-73	817	mono-exon	FALSE	NA	NA	NA	NA	NA	353	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAATTTATGAAATTTT	NA	False	NA	NA	False	NA	NA	NA	29313400	29312315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_-_29312300_29313400
m54284U_201217_021426/54134728/ccs	chr6	-	185	1	Intergenic	novelGene_3210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATTTTAAAAAAGAGAGAAA	NA	False	NA	NA	False	NA	NA	NA	38521030	38520845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_38520800_38521000
m54284U_201217_021426/54200494/ccs	chr18	-	5106	8	NIC	ENSMUSG00000056124.6	novel	5808	9	NA	NA	63	-522	combination_of_known_splicesites	FALSE	canonical	0	0	junction_7	107.158094154651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTAAAATTCCTATCC	NA	False	NA	NA	False	NA	NA	NA	20879398	20818177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20878409
m54284U_201217_021426/54264002/ccs	chr8	-	170	1	Intergenic	novelGene_4325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	71069149	71068979	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_71069000_71069100
m54284U_201217_021426/54264884/ccs	chrX	-	230	1	Intergenic	novelGene_9435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACACAAAAGAGATTGA	NA	False	NA	NA	False	NA	NA	NA	38781002	38780772	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_38780800_38781000
m54284U_201217_021426/54330016/ccs	chrX	+	2066	1	FSM	ENSMUSG00000051582.3	ENSMUST00000060241.3	873	1	173	-1366	173	1366	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTTTGCATTTCTTG	NA	False	NA	5	True	AATAAA	-15	NA	99472791	99474857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrX_+_99472800_99474900
m54284U_201217_021426/54395336/ccs	chr11	-	5016	1	FSM	ENSMUSG00000089542.3	ENSMUST00000158917.3	144	1	-3320	-1552	-3320	1552	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGGAACCGTGAAC	NA	False	NA	-17	True	AATAAA	-17	NA	69563141	69558125	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_69558100_69563100
m54284U_201217_021426/54395516/ccs	chr4	-	946	1	NIC	ENSMUSG00000037242.9	novel	4119	6	NA	NA	52	-48353	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAAGAAAAAGCG	NA	False	NA	NA	False	NA	NA	NA	135000073	134999127	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_134999100_135000100
m54284U_201217_021426/5441637/ccs	chr17	-	202	1	Intergenic	novelGene_8656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGGGTGAGCCTGGCATT	1244	False	NA	NA	False	NA	NA	NA	56608752	56608550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_56608600_56608800
m54284U_201217_021426/54461198/ccs	chr12	+	184	1	Intergenic	novelGene_6839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAAGAAGGTTTTCTGTA	NA	False	NA	NA	False	NA	NA	NA	98970679	98970863	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_98970700_98970900
m54284U_201217_021426/54526090/ccs	chr4	-	164	1	Intergenic	novelGene_1918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCAATGTTATATTTTAG	NA	False	NA	NA	False	NA	NA	NA	83418667	83418503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_83418500_83418700
m54284U_201217_021426/54723010/ccs	chr9	+	208	1	Intergenic	novelGene_4833	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGGATTTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	59693688	59693896	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_59693700_59693900
m54284U_201217_021426/54723946/ccs	chr8	+	172	1	Intergenic	novelGene_4343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTTTAAGAACAAA	1453	False	NA	NA	False	NA	NA	NA	73384848	73385020	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_73384800_73385000
m54284U_201217_021426/54723957/ccs	chr5	-	175	1	Intergenic	novelGene_2809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGATACAAAACCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	115802487	115802312	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115802300_115802500
m54284U_201217_021426/54854637/ccs	chr9	-	1294	10	NIC	ENSMUSG00000070319.7	novel	1101	11	NA	NA	0	0	intron_retention	FALSE	canonical	3	2112	junction_9	221.286697451826	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCCTGCTTATTTTCT	5156	False	NA	-1	True	AGTAAA	-16	NA	20809902	20805644	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809721_20809839
m54284U_201217_021426/54921989/ccs	chr13	+	118	1	FSM	ENSMUSG00000094185.3	ENSMUST00000180224.3	480	1	425	-63	425	63	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCACCCTAATAACAGA	NA	False	NA	NA	False	AATAAA	-43	NA	12393463	12393581	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_+_12393500_12393600
m54284U_201217_021426/54986073/ccs	chr19	+	185	1	Intergenic	novelGene_9199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGTTAAATACAATCG	NA	False	NA	NA	False	NA	NA	NA	28467621	28467806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_28467600_28467800
m54284U_201217_021426/55050701/ccs	chr6	-	196	1	Intergenic	novelGene_3423	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTATTTAAAAAAAAAAGAAA	7501	False	NA	NA	False	NA	NA	NA	113524120	113523924	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_113523900_113524100
m54284U_201217_021426/55052118/ccs	chr3	-	235	1	Intergenic	novelGene_1498	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGCACTTGGGAGGCAG	NA	False	NA	NA	False	NA	NA	NA	88670612	88670377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88670400_88670600
m54284U_201217_021426/55052852/ccs	chr12	+	120	1	Intergenic	novelGene_6920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCAGTGGGTGTGTGTGTG	NA	False	NA	NA	False	NA	NA	NA	111522376	111522496	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_111522400_111522500
m54284U_201217_021426/5506544/ccs	chr13	-	222	1	Intergenic	novelGene_7022	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	574	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCTCAGAAGGGCTAGAA	5573	False	NA	NA	False	NA	NA	NA	38032404	38032182	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_38032200_38032400
m54284U_201217_021426/5507849/ccs	chr11	-	191	2	Antisense	novelGene_ENSMUSG00000081766.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTATATG	7388	False	NA	NA	False	NA	NA	NA	88869701	88852587	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_88852730_88869652
m54284U_201217_021426/55118544/ccs	chr17	+	215	1	Intergenic	novelGene_8717	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATACAACTGTTTGTGGA	NA	False	NA	NA	False	NA	NA	NA	73422779	73422994	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_73422800_73423000
m54284U_201217_021426/55183385/ccs	chr2	+	190	1	Intergenic	novelGene_1325	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCTCAAAGCTCTGGAGT	NA	False	NA	NA	False	NA	NA	NA	181137854	181138044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_181137900_181138000
m54284U_201217_021426/55248736/ccs	chr19	-	179	1	Intergenic	novelGene_9132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4938	False	NA	NA	False	NA	NA	NA	7009243	7009064	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_7009100_7009200
m54284U_201217_021426/55313498/ccs	chrX	+	101	1	Intergenic	novelGene_9460	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTGCATTAAGAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51262011	51262112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_51262000_51262100
m54284U_201217_021426/55314131/ccs	chr3	-	210	1	Intergenic	novelGene_1491	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	8547	False	NA	NA	False	NA	NA	NA	88545905	88545695	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88545700_88545900
m54284U_201217_021426/55379449/ccs	chr2	+	215	1	Intergenic	novelGene_1236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTATGTTATTTTTC	NA	False	NA	NA	False	NA	NA	NA	166689315	166689530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_166689300_166689500
m54284U_201217_021426/55574911/ccs	chr8	+	94	1	Intergenic	novelGene_4540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	120208374	120208468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_120208400_120208500
m54284U_201217_021426/55707120/ccs	chr1	-	206	1	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACTGCATGGTACTGGT	NA	False	NA	NA	False	NA	NA	NA	12176808	12176602	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_12176600_12176800
m54284U_201217_021426/5571916/ccs	chr11	-	4692	7	NIC	ENSMUSG00000020413.12	novel	4640	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	104	junction_5	40.1721987891571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAATTCATTTATTAAT	NA	False	NA	92	True	AATAAA	-21	NA	8961164	8943136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960625_8961058
m54284U_201217_021426/5572000/ccs	chr18	+	184	1	Intergenic	novelGene_8970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTGATGAAATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	60618659	60618843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_60618700_60618800
m54284U_201217_021426/5573081/ccs	chr11	-	177	1	Intergenic	novelGene_6371	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGCAACATAAAAAATAGCC	6444	False	NA	NA	False	NA	NA	NA	104539480	104539303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_104539300_104539500
m54284U_201217_021426/55772153/ccs	chr5	-	192	1	Intergenic	novelGene_3027	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAATGGTTGACTGATG	NA	False	NA	NA	False	NA	NA	NA	140881102	140880910	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_140880900_140881100
m54284U_201217_021426/55902509/ccs	chr16	-	183	1	Intergenic	novelGene_8253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAGAATTAACTTTGTTA	NA	False	NA	NA	False	NA	NA	NA	38163571	38163388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_38163400_38163600
m54284U_201217_021426/55903590/ccs	chr2	-	235	1	Intergenic	novelGene_621	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTTAGTGAAGCTCAA	NA	False	NA	NA	False	NA	NA	NA	22816392	22816157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_22816200_22816400
m54284U_201217_021426/55969401/ccs	chrX	+	190	1	Intergenic	novelGene_9580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAGTTAGTCAAAGAA	NA	False	NA	NA	False	NA	NA	NA	102285449	102285639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_102285400_102285600
m54284U_201217_021426/56035493/ccs	chr11	-	182	1	Intergenic	novelGene_6142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAACTGGTA	136	False	NA	NA	False	NA	NA	NA	85093988	85093806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_85093800_85094000
m54284U_201217_021426/56099314/ccs	chr16	+	186	1	Intergenic	novelGene_8262	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTAAAACTTACATAAGC	NA	False	NA	NA	False	AATAAA	-37	NA	44048462	44048648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_44048500_44048600
m54284U_201217_021426/56166868/ccs	chr5	-	176	1	Intergenic	novelGene_3045	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTAAAAAAAATGAAGG	3308	False	NA	NA	False	NA	NA	NA	143109705	143109529	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_143109500_143109700
m54284U_201217_021426/56230064/ccs	chr14	-	4701	6	NIC	ENSMUSG00000062014.14	novel	4171	7	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_3	231.362572599805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAGTGTTTTATTTTTT	NA	False	NA	-2	True	AATAAA	-18	NA	47059699	47045605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47049281_47051700_47051775_47052361_47052445_47053054_47053685_47054842_47054940_47059557
m54284U_201217_021426/56298118/ccs	chr5	-	190	1	Intergenic	novelGene_3088	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGCTCACTGAGACTGCA	NA	False	NA	NA	False	NA	NA	NA	149467725	149467535	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_149467500_149467700
m54284U_201217_021426/56298307/ccs	chr7	-	230	1	Intergenic	novelGene_3760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGACAGCAGCCACTG	NA	False	NA	NA	False	NA	NA	NA	29536953	29536723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_29536700_29537000
m54284U_201217_021426/5638548/ccs	chr10	-	191	1	Intergenic	novelGene_5169	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAACTACATATATCAAAT	NA	False	NA	NA	False	NA	NA	NA	3885557	3885366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_3885400_3885600
m54284U_201217_021426/56492531/ccs	chr13	-	256	1	FSM	ENSMUSG00002075551.1	ENSMUST00020182858.1	57	1	0	-199	0	199	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTAGGGAAACAACACC	NA	False	NA	NA	False	NA	NA	NA	9884561	9884305	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr13_-_9884300_9884600
m54284U_201217_021426/56492703/ccs	chr1	-	153	1	Intergenic	novelGene_253	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAAAATTTTAAA	NA	False	NA	NA	False	NA	NA	NA	93588726	93588573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_93588600_93588700
m54284U_201217_021426/56494603/ccs	chr7	-	186	1	Intergenic	novelGene_3617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAGAAAAGCAGAAA	NA	False	NA	NA	False	NA	NA	NA	3429834	3429648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3429600_3429800
m54284U_201217_021426/56558069/ccs	chr18	-	6765	1	NIC	ENSMUSG00000024360.9	novel	3709	11	NA	NA	0	-22458	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACTGTAGTAAGATTT	NA	False	NA	NA	False	NA	NA	NA	35065060	35058295	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_-_35058300_35065100
m54284U_201217_021426/56623605/ccs	chr16	-	197	1	Intergenic	novelGene_8106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAATGTTTCCTCCTTCCT	NA	False	NA	NA	False	NA	NA	NA	17356491	17356294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_17356300_17356500
m54284U_201217_021426/56754610/ccs	chr18	-	2118	1	FSM	ENSMUSG00000084514.2	ENSMUST00000122565.2	83	1	-364	-1671	-364	1671	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTTGTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	6491010	6488892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_6488900_6491000
m54284U_201217_021426/56756663/ccs	chr2	-	205	1	Intergenic	novelGene_767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAAAGAGCAAGCTACAT	6113	False	NA	NA	False	NA	NA	NA	37361627	37361422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_37361400_37361600
m54284U_201217_021426/56821715/ccs	chr5	-	157	1	Intergenic	novelGene_2851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	121416478	121416321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121416300_121416500
m54284U_201217_021426/56885506/ccs	chr4	+	202	1	Intergenic	novelGene_2216	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAAAATGATGGGAC	7663	False	NA	NA	False	NA	NA	NA	133104522	133104724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133104500_133104700
m54284U_201217_021426/56885908/ccs	chr10	-	173	1	Intergenic	novelGene_5608	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAGCTTTTAAATA	6047	False	NA	NA	False	NA	NA	NA	127519806	127519633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127519600_127519800
m54284U_201217_021426/56887662/ccs	chr5	-	175	1	Intergenic	novelGene_2894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAGCTTAAACTCCTT	8460	False	NA	NA	False	NA	NA	NA	124075015	124074840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124074800_124075000
m54284U_201217_021426/56951067/ccs	chr10	-	186	1	Intergenic	novelGene_5333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATTTATTATTATATC	NA	False	NA	NA	False	NA	NA	NA	61239669	61239483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_61239500_61239700
m54284U_201217_021426/56952805/ccs	chr10	-	235	1	Intergenic	novelGene_5273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGTCCTAAACACATAC	NA	False	NA	NA	False	AAAAAG	-14	NA	40306127	40305892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_40305900_40306100
m54284U_201217_021426/5701865/ccs	chr2	-	245	1	Intergenic	novelGene_903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTACTTGTGAGCCAAT	NA	False	NA	NA	False	NA	NA	NA	84553351	84553106	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_84553100_84553400
m54284U_201217_021426/5703916/ccs	chr15	+	205	1	Intergenic	novelGene_7951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATCTGCCCTGGCCT	NA	False	NA	NA	False	NA	NA	NA	98901272	98901477	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98901300_98901500
m54284U_201217_021426/5703984/ccs	chr17	-	2039	14	NNC	ENSMUSG00000023942.16	novel	2092	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_8	708.14105337799	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	False	NA	-4	True	AATAAA	-15	NA	45906482	45896128	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900433_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45906407
m54284U_201217_021426/57147469/ccs	chr17	+	186	1	Intergenic	novelGene_8689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGCTACACTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	66822711	66822897	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_66822700_66822900
m54284U_201217_021426/57149770/ccs	chr4	-	155	1	Intergenic	novelGene_2041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTTTTTTAAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	117098688	117098533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_117098500_117098700
m54284U_201217_021426/57215661/ccs	chr5	+	160	1	Intergenic	novelGene_2587	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	65628058	65628218	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_65628100_65628200
m54284U_201217_021426/57410197/ccs	chr2	+	176	1	Intergenic	novelGene_1279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAATTTCAATACT	8901	False	NA	NA	False	NA	NA	NA	169924024	169924200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_169924000_169924200
m54284U_201217_021426/57410249/ccs	chr11	+	181	1	Intergenic	novelGene_6086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATATTCTGTGAGTTGT	NA	False	NA	NA	False	NA	NA	NA	79619078	79619259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79619100_79619300
m54284U_201217_021426/57411514/ccs	chr14	+	203	1	Intergenic	novelGene_7361	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAGATTCTAGTTGCT	6480	False	NA	NA	False	NA	NA	NA	25849084	25849287	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_25849100_25849300
m54284U_201217_021426/57411936/ccs	chr3	+	173	1	Intergenic	novelGene_1616	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCCAGAATGAGCAAGGC	NA	False	NA	NA	False	NA	NA	NA	104445459	104445632	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_104445500_104445600
m54284U_201217_021426/57475688/ccs	chr3	-	231	1	Intergenic	novelGene_1643	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCACGAACCAGAAGAAATA	NA	False	NA	NA	False	NA	NA	NA	116517194	116516963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_116517000_116517200
m54284U_201217_021426/57540847/ccs	chr11	+	178	1	Intergenic	novelGene_5756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAATAAAGAAATCACA	NA	False	NA	NA	False	NA	NA	NA	29237916	29238094	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_29237900_29238100
m54284U_201217_021426/57672321/ccs	chr9	-	204	1	Intergenic	novelGene_4634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	348	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTTACTTTGTTACA	NA	False	NA	NA	False	NA	NA	NA	13702599	13702395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_13702400_13702600
m54284U_201217_021426/57674478/ccs	chr11	+	234	1	Intergenic	novelGene_5666	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAATAATGATATATAGA	NA	False	NA	NA	False	TTTAAA	-5	NA	4595430	4595664	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4595400_4595700
m54284U_201217_021426/5769108/ccs	chr12	+	180	1	Intergenic	novelGene_6822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACTATCATCTTTTTAAA	6466	False	NA	20	True	NA	NA	NA	86909171	86909351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_86909200_86909400
m54284U_201217_021426/5769640/ccs	chr11	-	2844	1	ISM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	16497	140	16211	-140	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGTGAGTTATTAATGG	NA	False	NA	NA	False	AATAGA	-18	NA	23599462	23596618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr11_-_23596600_23599500
m54284U_201217_021426/5769741/ccs	chr12	-	163	1	Intergenic	novelGene_6940	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	NA	False	NA	NA	False	NA	NA	NA	116290696	116290533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_116290500_116290700
m54284U_201217_021426/57870210/ccs	chr3	+	197	1	Intergenic	novelGene_1437	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCCAAGCTTCCTTCTG	NA	False	NA	NA	False	NA	NA	NA	76831802	76831999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_76831800_76832000
m54284U_201217_021426/58001552/ccs	chr18	-	182	1	Intergenic	novelGene_9050	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTCTAGAGTGATCT	NA	False	NA	NA	False	NA	NA	NA	80543405	80543223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_80543200_80543400
m54284U_201217_021426/58065219/ccs	chr6	-	232	1	Intergenic	novelGene_3530	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGTTAGCCCGAAAGG	NA	False	NA	NA	False	NA	NA	NA	128460413	128460181	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128460200_128460400
m54284U_201217_021426/58066428/ccs	chr13	-	2222	1	Intergenic	novelGene_7298	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTCACCTGTACTTGG	NA	False	NA	NA	False	ATTAAA	-12	NA	108180878	108178656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_108178700_108180900
m54284U_201217_021426/58261655/ccs	chr8	-	173	1	Intergenic	novelGene_4565	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	122658828	122658655	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_122658700_122658800
m54284U_201217_021426/58262452/ccs	chr12	+	3197	1	Antisense	novelGene_ENSMUSG00000034168.8_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTGTGTTGTGATTT	NA	False	NA	7	True	AATAAA	-22	NA	86929323	86932520	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_+_86929300_86932500
m54284U_201217_021426/58262461/ccs	chr14	+	176	1	Intergenic	novelGene_7401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTTTAAAAAAATATTTG	NA	False	NA	NA	False	NA	NA	NA	40709506	40709682	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_40709500_40709700
m54284U_201217_021426/58328912/ccs	chr3	-	184	1	Intergenic	novelGene_1727	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTCAAGTGTCTTAACA	NA	False	NA	NA	False	NA	NA	NA	157649076	157648892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_157648900_157649100
m54284U_201217_021426/58329465/ccs	chr13	-	5444	1	Genic_Genomic	ENSMUSG00000021690.11	novel	NA	NA	NA	NA	-59	-30847	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTAGAAAAGGGTCTTGG	1428	False	NA	NA	False	NA	NA	NA	93636375	93630931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr13_-_93630900_93636400
m54284U_201217_021426/5835238/ccs	chr12	-	193	1	Intergenic	novelGene_6807	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAGGAGGAAAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	85055874	85055681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85055700_85055900
m54284U_201217_021426/58393673/ccs	chr15	+	191	1	Intergenic	novelGene_7955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATCTGCCTGCCTCTGTT	NA	False	NA	NA	False	NA	NA	NA	98968506	98968697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_98968500_98968700
m54284U_201217_021426/58394019/ccs	chr10	-	2510	7	NIC	ENSMUSG00000020232.18	novel	1463	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	169	junction_6	162.737774758454	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAATATTTGTGGCTTT	NA	False	NA	-8	True	AATAAA	-20	NA	81186278	81181881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81182312_81182393_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81186024_81186240
m54284U_201217_021426/58459155/ccs	chr9	-	195	1	Intergenic	novelGene_4767	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTATGTGGGAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	53166244	53166049	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_53166000_53166200
m54284U_201217_021426/58460720/ccs	chr15	-	182	1	Intergenic	novelGene_7965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCAATTAGTGCTCATAA	5169	False	NA	NA	False	NA	NA	NA	99365289	99365107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99365100_99365300
m54284U_201217_021426/58526264/ccs	chr11	-	2340	1	NIC	ENSMUSG00000038807.20	novel	764	6	NA	NA	0	-83369	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGGAAGGTTG	NA	False	NA	NA	False	NA	NA	NA	74413577	74411237	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_74411200_74413600
m54284U_201217_021426/58590850/ccs	chr5	-	178	1	Intergenic	novelGene_2764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGATAATCAGAT	NA	False	NA	NA	False	NA	NA	NA	110289369	110289191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_110289200_110289400
m54284U_201217_021426/58656761/ccs	chr2	-	221	1	Intergenic	novelGene_973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAGAATATAAGTT	NA	False	NA	NA	False	NA	NA	NA	104768055	104767834	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_104767800_104768100
m54284U_201217_021426/58656958/ccs	chr6	-	204	1	Intergenic	novelGene_3527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGCATGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	128396306	128396102	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_128396100_128396300
m54284U_201217_021426/58787048/ccs	chr11	+	189	1	Intergenic	novelGene_5923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAACAAACAAA	5571	False	NA	NA	False	NA	NA	NA	68128248	68128437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68128200_68128400
m54284U_201217_021426/58852307/ccs	chr7	-	186	1	Intergenic	novelGene_3982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGTAAGTGACAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	100791182	100790996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_100791000_100791200
m54284U_201217_021426/58852356/ccs	chr5	-	3181	1	Intergenic	novelGene_2547	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAAAGATT	7301	False	NA	NA	False	NA	NA	NA	34493532	34490351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_34490400_34493500
m54284U_201217_021426/58917803/ccs	chr2	+	192	1	Intergenic	novelGene_970	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAAAGAACTCTCACAA	NA	False	NA	NA	False	NA	NA	NA	104704190	104704382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_104704200_104704400
m54284U_201217_021426/58983849/ccs	chr3	-	179	1	Intergenic	novelGene_1518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTTAATAAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	89173300	89173121	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89173100_89173300
m54284U_201217_021426/58984925/ccs	chr5	+	219	1	Intergenic	novelGene_2854	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTAGCTAGTCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	121595050	121595269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_121595000_121595300
m54284U_201217_021426/5899725/ccs	chr12	-	177	1	Intergenic	novelGene_6604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAATATTAAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	28712000	28711823	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_28711800_28712000
m54284U_201217_021426/590231/ccs	chr9	-	199	1	Intergenic	novelGene_4676	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACTAAAAGAAGATAGCC	2165	False	NA	NA	False	NA	NA	NA	22319309	22319110	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_22319100_22319300
m54284U_201217_021426/59048012/ccs	chr7	+	179	1	Intergenic	novelGene_3909	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTGCTGTTGTTTTG	5929	False	NA	NA	False	NA	NA	NA	79666165	79666344	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_79666200_79666300
m54284U_201217_021426/59048071/ccs	chr2	-	207	1	Intergenic	novelGene_966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGCATGCACTTCTAA	NA	False	NA	NA	False	NA	NA	NA	104255353	104255146	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_104255100_104255400
m54284U_201217_021426/59049252/ccs	chr1	-	197	1	Intergenic	novelGene_523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTTGGTAATAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	181530864	181530667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_181530700_181530900
m54284U_201217_021426/59246824/ccs	chr7	-	164	1	Intergenic	novelGene_3668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTATTTATTTATTTTTT	NA	False	NA	NA	False	NA	NA	NA	16024165	16024001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_16024000_16024200
m54284U_201217_021426/59310164/ccs	chr9	+	174	1	Intergenic	novelGene_4732	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAGAAAAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	44284500	44284674	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_44284500_44284700
m54284U_201217_021426/59311884/ccs	chr1	-	173	1	Antisense	novelGene_ENSMUSG00000100830.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAAAGAGTAAGTAT	NA	False	NA	NA	False	NA	NA	NA	133765388	133765215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_-_133765200_133765400
m54284U_201217_021426/59312690/ccs	chr6	+	191	1	Intergenic	novelGene_3524	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATTTAAAAAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	128287431	128287622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_128287400_128287600
m54284U_201217_021426/59312945/ccs	chr2	-	197	1	Intergenic	novelGene_1119	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATCCCACAAAACACAAG	NA	False	NA	NA	False	NA	NA	NA	152091638	152091441	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_152091400_152091600
m54284U_201217_021426/59377285/ccs	chr11	+	2021	1	Genic_Genomic	ENSMUSG00000014245.9	novel	NA	NA	NA	NA	-1040	-52798	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACCTTTTTTCCCAT	NA	False	NA	13	True	NA	NA	NA	62348245	62350266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr11_+_62348200_62350300
m54284U_201217_021426/59442287/ccs	chr17	-	185	1	Intergenic	novelGene_8707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAGAATTAGGTGCAACT	NA	False	NA	NA	False	NA	NA	NA	71162754	71162569	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71162600_71162800
m54284U_201217_021426/59572838/ccs	chr6	-	236	1	Intergenic	novelGene_3103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGACTCTAGCCTTGA	3936	False	NA	NA	False	NA	NA	NA	5321345	5321109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_5321100_5321300
m54284U_201217_021426/5966357/ccs	chr7	-	174	1	Intergenic	novelGene_3959	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCCAAATAAACCAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	97837998	97837824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_97837800_97838000
m54284U_201217_021426/59704585/ccs	chr14	-	221	1	Intergenic	novelGene_7341	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGCTCAGAACTGAACAA	NA	False	NA	NA	False	NA	NA	NA	14785461	14785240	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_14785200_14785500
m54284U_201217_021426/59705084/ccs	chr5	-	219	1	Intergenic	novelGene_2845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAAGTGTATCCTCTGGT	NA	False	NA	NA	False	NA	NA	NA	120992252	120992033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_120992000_120992300
m54284U_201217_021426/59770292/ccs	chr11	+	174	1	Intergenic	novelGene_6435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTTAAAAATTATGTAA	NA	False	NA	NA	False	NA	NA	NA	113648697	113648871	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_113648700_113648900
m54284U_201217_021426/59771101/ccs	chrX	-	185	1	Intergenic	novelGene_9689	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTATTTTGCATGA	NA	False	NA	NA	False	NA	NA	NA	154089856	154089671	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_154089700_154089900
m54284U_201217_021426/59967135/ccs	chr10	+	203	1	Intergenic	novelGene_5623	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGGATACAAATCCCTT	358	False	NA	NA	False	NA	NA	NA	128111182	128111385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128111200_128111400
m54284U_201217_021426/60032951/ccs	chrX	+	187	1	Intergenic	novelGene_9475	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTGTATTCAGTGGCCA	NA	False	NA	NA	False	NA	NA	NA	56990660	56990847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_56990700_56990800
m54284U_201217_021426/60033546/ccs	chr8	-	530	1	FSM	ENSMUSG00000057657.5	ENSMUST00000080443.8	456	1	-15	-59	-15	59	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTAAAGAACATTGTAC	NA	False	NA	-10	True	AATAAA	-31	NA	107989895	107989365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_-_107989400_107989900
m54284U_201217_021426/60164432/ccs	chr9	-	170	1	Intergenic	novelGene_4948	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAAAGTTTATACA	NA	False	NA	NA	False	NA	NA	NA	75263688	75263518	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_75263500_75263700
m54284U_201217_021426/60295863/ccs	chr7	+	182	1	Intergenic	novelGene_3872	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAACAAGATGCCCACT	NA	False	NA	NA	False	NA	NA	NA	58279091	58279273	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_58279100_58279300
m54284U_201217_021426/6029748/ccs	chr17	+	1989	1	Antisense	novelGene_ENSMUSG00000116812.2_AS_novelGene_ENSMUSG00000116719.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAACAACAACAAAAAAACCA	NA	False	NA	NA	False	NA	NA	NA	6408835	6410824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr17_+_6408800_6410800
m54284U_201217_021426/6030537/ccs	chr3	+	3054	1	Intergenic	novelGene_1678	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	129335788	129338842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_129335800_129338800
m54284U_201217_021426/60358794/ccs	chr11	+	177	1	Intergenic	novelGene_5781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAATCAATTTT	NA	False	NA	NA	False	NA	NA	NA	43356983	43357160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_43357000_43357200
m54284U_201217_021426/60359567/ccs	chr4	+	170	1	Intergenic	novelGene_1801	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	35523292	35523462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_35523300_35523500
m54284U_201217_021426/60360072/ccs	chr18	-	174	1	Intergenic	novelGene_8803	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATAGCCTTCTGAGT	NA	False	NA	NA	False	NA	NA	NA	6759877	6759703	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_6759700_6759900
m54284U_201217_021426/60490278/ccs	chr2	-	4800	21	NNC	ENSMUSG00000039671.19	novel	5232	23	NA	NA	-909	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_20	178.777767074097	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGGCGTTTCTTCATGG	NA	False	NA	-3	True	ATTAAA	-18	NA	165727703	165626074	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_165627659_165629083_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649438_165649850_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165726527_165726759_165727426
m54284U_201217_021426/60557884/ccs	chr14	-	186	1	Intergenic	novelGene_7382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTAGTCTTTTTTTGGGG	NA	False	NA	NA	False	NA	NA	NA	30310093	30309907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_30309900_30310100
m54284U_201217_021426/60620814/ccs	chr5	+	1344	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	0	317	0	-317	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTTTCCCCTCAGTTC	3132	False	NA	NA	False	AAAAAG	-14	NA	135093055	135094399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_+_135093100_135094400
m54284U_201217_021426/60622212/ccs	chr11	+	243	1	Intergenic	novelGene_6108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAAGAGCACTGACTGCT	3013	False	NA	NA	False	AAGAAA	-34	NA	80144846	80145089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_80144800_80145100
m54284U_201217_021426/60688302/ccschrUn	chrUn_MU069435v1	-	136	1	Intergenic	novelGene_9747	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8297	8161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_MU069435v1_-_8200_8300
m54284U_201217_021426/60753791/ccs	chr12	-	172	1	Intergenic	novelGene_6749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAAAAGCCCGTAAGAA	NA	False	NA	NA	False	NA	NA	NA	79547869	79547697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_79547700_79547900
m54284U_201217_021426/61016413/ccs	chr10	+	193	1	Intergenic	novelGene_5201	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTTGTTCCTGTGTGTTT	NA	False	NA	NA	False	NA	NA	NA	13801836	13802029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_13801800_13802000
m54284U_201217_021426/61081519/ccs	chr11	-	193	1	Intergenic	novelGene_6001	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAAACTAGCTGGGCGT	NA	False	NA	NA	False	NA	NA	NA	75113298	75113105	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_75113100_75113300
m54284U_201217_021426/61146868/ccs	chr1	-	204	1	Intergenic	novelGene_108	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGACCAGATGGGTTT	NA	False	NA	NA	False	NA	NA	NA	44568666	44568462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_44568500_44568700
m54284U_201217_021426/61278720/ccs	chr2	-	206	1	Intergenic	novelGene_1063	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAACCAAACAATGCCCC	NA	False	NA	NA	False	TTTAAA	-14	NA	128925164	128924958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_128925000_128925200
m54284U_201217_021426/61409672/ccs	chr11	+	169	1	Intergenic	novelGene_5649	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAACGAAACAAAAAGCAC	7079	False	NA	NA	False	NA	NA	NA	3211059	3211228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_3211100_3211200
m54284U_201217_021426/61475201/ccs	chr5	-	1133	8	NNC	ENSMUSG00000028945.10	novel	1784	8	NA	NA	-210	419	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	555.228506002304	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGAGCTACTTGGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	25047832	25008245	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047618
m54284U_201217_021426/61539225/ccs	chr6	-	170	1	Intergenic	novelGene_3324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTTTTAAAAAATGAAATAA	NA	False	NA	NA	False	NA	NA	NA	72145207	72145037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_72145000_72145200
m54284U_201217_021426/61604018/ccs	chr5	-	197	1	Intergenic	novelGene_2968	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTATAATCCTAGCCCT	NA	False	NA	NA	False	NA	NA	NA	134691640	134691443	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_134691400_134691600
m54284U_201217_021426/6161485/ccs	chr11	-	218	1	Intergenic	novelGene_5662	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATCTGAGCTTACA	7832	False	NA	NA	False	NA	NA	NA	4456465	4456247	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_4456200_4456500
m54284U_201217_021426/61802522/ccs	chr12	+	188	1	Intergenic	novelGene_6745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGACTTCTTGCCTAGC	NA	False	NA	NA	False	NA	NA	NA	78860282	78860470	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_78860300_78860500
m54284U_201217_021426/61803255/ccs	chr16	-	181	1	Intergenic	novelGene_8207	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAGGAGCCATTCC	NA	False	NA	NA	False	NA	NA	NA	31960500	31960319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_31960300_31960500
m54284U_201217_021426/61868238/ccs	chr9	-	216	1	Intergenic	novelGene_4760	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGAAACACTAGTGAGG	NA	False	NA	NA	False	NA	NA	NA	50562526	50562310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_50562300_50562500
m54284U_201217_021426/61868649/ccs	chr2	-	176	1	Intergenic	novelGene_741	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	33876188	33876012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_33876000_33876200
m54284U_201217_021426/61931877/ccs	chr9	-	180	1	Intergenic	novelGene_4638	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAAAGAGCT	2435	False	NA	NA	False	NA	NA	NA	14749566	14749386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_14749400_14749600
m54284U_201217_021426/61998608/ccs	chr13	+	191	1	Intergenic	novelGene_6995	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGGCTTGAATGTACAC	NA	False	NA	NA	False	NA	NA	NA	23724220	23724411	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_23724200_23724400
m54284U_201217_021426/62063701/ccs	chr15	-	190	1	Intergenic	novelGene_7746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTATGTGGCTAGTGCT	NA	False	NA	NA	False	NA	NA	NA	70004208	70004018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_70004000_70004200
m54284U_201217_021426/62195944/ccs	chr11	+	1597	1	Antisense	novelGene_ENSMUSG00000036391.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGCACGGAGTAAGCTC	NA	False	NA	NA	False	NA	NA	NA	51603503	51605100	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_+_51603500_51605100
m54284U_201217_021426/6227743/ccs	chr19	-	1472	5	NIC	ENSMUSG00000037349.10	novel	1000	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	112	junction_2	18.8679622641132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGTTAGCTTCTGCTGCT	7045	False	NA	-3	True	AATAAA	-17	NA	6973405	6970385	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6973104_6973375
m54284U_201217_021426/6228052/ccs	chr3	-	171	1	Intergenic	novelGene_1385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTTTAAAAAAAAAGTACTC	NA	False	NA	NA	False	NA	NA	NA	34845730	34845559	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_34845600_34845700
m54284U_201217_021426/6228233/ccs	chr9	+	176	1	Intergenic	novelGene_4633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAATATTCTGCACA	NA	False	NA	NA	False	NA	NA	NA	13691461	13691637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_13691500_13691600
m54284U_201217_021426/62325906/ccs	chr5	-	171	1	Intergenic	novelGene_2665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAACAAAAACTGT	8404	False	NA	NA	False	NA	NA	NA	92255260	92255089	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_92255100_92255300
m54284U_201217_021426/62390882/ccs	chr6	+	202	1	Intergenic	novelGene_3453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAATCTTTCAGAGCAAT	1170	False	NA	NA	False	NA	NA	NA	120190281	120190483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_120190300_120190500
m54284U_201217_021426/62391665/ccs	chr9	+	174	1	Antisense	novelGene_ENSMUSG00000064145.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATTAAAGCTACA	4030	False	NA	NA	False	NA	NA	NA	108521780	108521954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr9_+_108521800_108522000
m54284U_201217_021426/62392373/ccs	chr14	-	4800	1	NIC	ENSMUSG00000068245.15	novel	2666	11	NA	NA	11879	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTGTGCACCGTTTAT	6988	False	NA	-1	True	AATAAA	-16	NA	59590980	59586180	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_59586200_59591000
m54284U_201217_021426/62392930/ccs	chr4	+	204	1	Intergenic	novelGene_2037	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGAGAACAGTGTACT	NA	False	NA	NA	False	NA	NA	NA	116916755	116916959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_116916800_116917000
m54284U_201217_021426/62458056/ccs	chrX	-	5462	1	NIC	ENSMUSG00000039556.17	novel	4760	4	NA	NA	0	-6592	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTTGAGTATTTTTTCA	NA	False	NA	NA	False	NA	NA	NA	7440522	7435060	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chrX_-_7435100_7440500
m54284U_201217_021426/62523834/ccs	chr4	-	187	1	Intergenic	novelGene_1895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTCTTTTTCTTTTCCAA	NA	False	NA	NA	False	NA	NA	NA	62901553	62901366	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_62901400_62901600
m54284U_201217_021426/62587594/ccs	chr6	-	190	1	Intergenic	novelGene_3542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTCAGGGGCTGGAGAAG	NA	False	NA	NA	False	NA	NA	NA	134274230	134274040	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_134274000_134274200
m54284U_201217_021426/62718078/ccs	chr1	+	178	1	Intergenic	novelGene_536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAACAAAACCCCCAA	NA	False	NA	NA	False	NA	NA	NA	183820712	183820890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_183820700_183820900
m54284U_201217_021426/62980743/ccs	chr10	+	216	1	Intergenic	novelGene_5340	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCAGTCTCTCCCTTCC	NA	False	NA	NA	False	TTTAAA	-5	NA	61794937	61795153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61794900_61795200
m54284U_201217_021426/63113036/ccs	chrX	-	178	1	Intergenic	novelGene_9686	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAAAAGAATCCTA	4296	False	NA	NA	False	NA	NA	NA	152291182	152291004	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_152291000_152291200
m54284U_201217_021426/63176828/ccs	chr10	-	216	1	Intergenic	novelGene_5452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCCCAAGCCTATTTTG	7777	False	NA	NA	False	NA	NA	NA	80579529	80579313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_80579300_80579500
m54284U_201217_021426/63242562/ccs	chr9	-	108	1	Intergenic	novelGene_4746	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAGAAAGGAAAGAAAAC	6861	False	NA	NA	False	NA	NA	NA	45940111	45940003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_45940000_45940100
m54284U_201217_021426/63243375/ccs	chr4	-	158	1	Intergenic	novelGene_2047	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATC	NA	False	NA	NA	False	NA	NA	NA	117668777	117668619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_117668600_117668800
m54284U_201217_021426/63375341/ccs	chr18	+	177	1	Intergenic	novelGene_9042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTATTGTTTTCTTTGTG	4937	False	NA	NA	False	NA	NA	NA	77875223	77875400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_77875200_77875400
m54284U_201217_021426/63440702/ccs	chr3	+	138	1	Intergenic	novelGene_1657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTCTCTGATGGTT	NA	False	NA	NA	False	AATAAA	-18	NA	121426259	121426397	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_121426300_121426400
m54284U_201217_021426/63507185/ccs	chrM	+	2168	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	236	-580	236	580	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGACAAACATACGAAAAACA	232	False	NA	88	True	NA	NA	NA	11977	14145	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chrM_+_12000_14100
m54284U_201217_021426/6358967/ccs	chr11	-	190	1	Intergenic	novelGene_5773	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACAACGTGACTATCA	1459	False	NA	NA	False	NA	NA	NA	33512294	33512104	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_33512100_33512300
m54284U_201217_021426/63702223/ccs	chr1	-	136	1	Intergenic	novelGene_273	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	3643	False	NA	NA	False	NA	NA	NA	118295948	118295812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_118295800_118295900
m54284U_201217_021426/63833455/ccs	chr8	-	189	1	Intergenic	novelGene_4369	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTGGGAGGCTAGGTG	8602	False	NA	NA	False	NA	NA	NA	84970114	84969925	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_84969900_84970100
m54284U_201217_021426/63834598/ccs	chr1	-	8176	45	NIC	ENSMUSG00000026193.16	novel	8315	46	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_4	457.544005019108	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	False	NA	-9	True	AATAAA	-15	NA	71692359	71624681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
m54284U_201217_021426/63834812/ccs	chr3	+	187	1	ISM	ENSMUSG00000078578.10	ENSMUST00000196564.2	940	2	1514	338	1514	309	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTGCAAGATTGGGGA	NA	False	NA	NA	False	NA	NA	NA	135165922	135166109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr3_+_135165900_135166100
m54284U_201217_021426/63899962/ccs	chr3	-	2438	1	Genic_Genomic	ENSMUSG00000084370.4	novel	NA	NA	NA	NA	-153	455	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAACAAAAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	78396097	78393659	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr3_-_78393700_78396100
m54284U_201217_021426/63964727/ccs	chr14	-	166	1	Intergenic	novelGene_7594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	113332175	113332009	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_113332000_113332200
m54284U_201217_021426/64094732/ccs	chr14	-	168	1	Intergenic	novelGene_7601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAGAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	121724972	121724804	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_121724800_121725000
m54284U_201217_021426/64095075/ccs	chr2	-	175	1	Intergenic	novelGene_965	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAGAGCGAGCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	103736025	103735850	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_103735800_103736000
m54284U_201217_021426/64095497/ccs	chr5	+	180	1	Intergenic	novelGene_2842	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAGGAAAAAAAAA	2034	False	NA	NA	False	NA	NA	NA	120713815	120713995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_120713800_120714000
m54284U_201217_021426/64095599/ccs	chr14	-	179	1	Intergenic	novelGene_7348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAGAAGGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	21185112	21184933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_21184900_21185100
m54284U_201217_021426/64160002/ccs	chr5	+	177	1	Intergenic	novelGene_2500	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTCCCCCCA	NA	False	NA	NA	False	NA	NA	NA	27829938	27830115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_27829900_27830100
m54284U_201217_021426/64227595/ccs	chr15	-	183	1	Intergenic	novelGene_7650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGAGCTATATCTGGGTC	NA	False	NA	NA	False	NA	NA	NA	19526585	19526402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_19526400_19526600
m54284U_201217_021426/64291565/ccs	chr7	-	209	1	Intergenic	novelGene_4074	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATAGGAAGCAATAGAA	NA	False	NA	NA	False	AATAAA	-27	NA	125216631	125216422	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_125216400_125216600
m54284U_201217_021426/64291681/ccs	chr8	-	187	1	Intergenic	novelGene_4294	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAAAGAGGCAGA	NA	False	NA	NA	False	NA	NA	NA	48229304	48229117	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_48229100_48229300
m54284U_201217_021426/64292753/ccs	chr6	+	1668	1	FSM	ENSMUSG00000079224.6	ENSMUST00000121217.2	438	1	-19	-1211	-19	1211	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGAACACACAGGAGAC	NA	False	NA	NA	False	NA	NA	NA	100581624	100583292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr6_+_100581600_100583300
m54284U_201217_021426/64422036/ccs	chr4	-	193	1	Intergenic	novelGene_2342	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTATTTACATTAACA	NA	False	NA	NA	False	NA	NA	NA	146360743	146360550	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_146360600_146360700
m54284U_201217_021426/64424370/ccs	chr19	-	264	1	Intergenic	novelGene_9301	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCCCTCTGGGGGCTGG	NA	False	NA	NA	False	NA	NA	NA	45799312	45799048	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45799000_45799300
m54284U_201217_021426/64553116/ccs	chr1	-	790	1	FSM	ENSMUSG00000103653.2	ENSMUST00000195526.2	631	1	-75	-84	-75	84	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCAGCTATGGCCCTCCG	NA	False	NA	NA	False	AATAAA	-34	NA	191758825	191758035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_191758000_191758800
m54284U_201217_021426/64749861/ccs	chr7	-	168	1	Intergenic	novelGene_3698	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCTACAAAGTTGATTGA	NA	False	NA	NA	False	NA	NA	NA	24160139	24159971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_24160000_24160100
m54284U_201217_021426/64751109/ccs	chr12	+	431	1	FSM	ENSMUSG00000113948.2	ENSMUST00000221295.2	556	1	197	-72	197	72	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATATATTTCAATAAT	NA	False	NA	NA	False	NA	NA	NA	67557726	67558157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_67557700_67558200
m54284U_201217_021426/64880740/ccs	chr5	+	189	1	Intergenic	novelGene_2998	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCTAAACAAATATAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	137458787	137458976	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_137458800_137459000
m54284U_201217_021426/64881911/ccs	chr6	-	209	1	Intergenic	novelGene_3157	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTTCTCTGAGCACAGT	9845	False	NA	NA	False	TTTAAA	-13	NA	30796952	30796743	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_30796700_30797000
m54284U_201217_021426/6488211/ccs	chr11	+	179	1	Intergenic	novelGene_5960	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGGAAATGGCCAGCC	NA	False	NA	NA	False	NA	NA	NA	70316124	70316303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_70316100_70316300
m54284U_201217_021426/64883229/ccs	chr11	-	224	1	Intergenic	novelGene_6304	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGCATTGAATAATAGGC	NA	False	NA	NA	False	AATAAA	-22	NA	98602950	98602726	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_98602700_98603000
m54284U_201217_021426/6489081/ccs	chr12	-	173	1	Intergenic	novelGene_6731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAGTCAAAT	NA	False	NA	NA	False	NA	NA	NA	76406559	76406386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_76406400_76406600
m54284U_201217_021426/6490498/ccs	chr10	+	189	1	Intergenic	novelGene_5335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAATAATAAATCATCTT	NA	False	NA	NA	False	NA	NA	NA	61323189	61323378	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61323200_61323400
m54284U_201217_021426/64946980/ccs	chr2	-	207	1	Intergenic	novelGene_929	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTAAGGGACACACTG	6278	False	NA	NA	False	NA	NA	NA	91249762	91249555	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_91249600_91249800
m54284U_201217_021426/65145395/ccs	chr8	+	4108	1	NIC	ENSMUSG00000033009.16	novel	5310	13	NA	NA	0	1915	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGCCTTGGCAGGGCAG	NA	False	NA	NA	False	NA	NA	NA	94763887	94767995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_94763900_94768000
m54284U_201217_021426/65145481/ccs	chr18	-	182	1	Intergenic	novelGene_8894	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAAGTGTTTTTATCCTGT	NA	False	NA	NA	False	NA	NA	NA	35728810	35728628	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35728600_35728800
m54284U_201217_021426/65209950/ccs	chr9	-	170	1	Intergenic	novelGene_4664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTAGAAAAACTCTTTT	NA	False	NA	NA	False	NA	NA	NA	21445907	21445737	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21445700_21445900
m54284U_201217_021426/65405469/ccs	chr13	-	193	1	Intergenic	novelGene_7042	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAGGAGAAAGAGAAG	NA	False	NA	NA	False	NA	NA	NA	43767416	43767223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_43767200_43767400
m54284U_201217_021426/65406868/ccs	chr2	-	151	1	Intergenic	novelGene_750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAATACATTTCTTAACT	NA	False	NA	NA	False	NA	NA	NA	34613769	34613618	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_34613600_34613800
m54284U_201217_021426/65471694/ccs	chr2	-	171	1	Intergenic	novelGene_858	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	72857100	72856929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_72856900_72857100
m54284U_201217_021426/6555609/ccs	chr2	-	156	1	Intergenic	novelGene_951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	92792558	92792402	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_92792400_92792600
m54284U_201217_021426/65668356/ccs	chr17	+	3776	20	NNC	ENSMUSG00000061950.18	novel	3784	20	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_10	123.111957244699	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCACCCACTTTGTTTC	NA	False	NA	17	True	AATAAA	-27	NA	66090593	66148851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136374_66136543_66136863_66136986_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
m54284U_201217_021426/65732866/ccs	chr7	-	3310	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	-525	1648	-525	-1648	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCTTTTCGCAGTTAC	NA	False	NA	-14	True	ATTAAA	-15	NA	83534038	83530728	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_-_83530700_83534000
m54284U_201217_021426/65735306/ccs	chr10	-	195	1	Intergenic	novelGene_5604	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAAACAAGGGAGGGGCT	8536	False	NA	NA	False	NA	NA	NA	127274038	127273843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_127273800_127274000
m54284U_201217_021426/65800195/ccs	chr2	-	4720	1	NIC	ENSMUSG00000034154.16	novel	6354	36	NA	NA	61919	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTCTGTGGTCTTT	542	False	NA	0	True	AATAAA	-26	NA	119208242	119203522	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_119203500_119208200
m54284U_201217_021426/658136/ccs	chr16	+	293	1	Intergenic	novelGene_8306	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAGAAAGAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	87204392	87204685	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_87204400_87204700
m54284U_201217_021426/65846/ccs	chr7	-	165	1	Intergenic	novelGene_3614	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	3321737	3321572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3321600_3321700
m54284U_201217_021426/65866420/ccs	chr7	+	177	1	Intergenic	novelGene_4116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAAGAAGATTCA	NA	False	NA	NA	False	NA	NA	NA	129711859	129712036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_129711900_129712000
m54284U_201217_021426/65929578/ccs	chr4	-	171	1	Intergenic	novelGene_1877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAGAGAAGAGAAAG	9840	False	NA	NA	False	NA	NA	NA	57933977	57933806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_57933800_57934000
m54284U_201217_021426/66125860/ccs	chr10	-	203	1	Intergenic	novelGene_5232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCGGGGGGGGGGACAGAGA	NA	False	NA	NA	False	NA	NA	NA	24933150	24932947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_24932900_24933200
m54284U_201217_021426/66192983/ccs	chr15	+	246	1	Intergenic	novelGene_7719	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAATGTTGCAATTTT	NA	False	NA	NA	False	NA	NA	NA	56577542	56577788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_56577500_56577800
m54284U_201217_021426/66194006/ccs	chr15	+	185	1	Intergenic	novelGene_7751	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTATCCAGCTGGGCAGT	NA	False	NA	NA	False	NA	NA	NA	73275014	73275199	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_73275000_73275200
m54284U_201217_021426/6619771/ccs	chr11	+	214	1	Intergenic	novelGene_6337	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAAGAACCGTAAGTT	NA	False	NA	NA	False	ATTAAA	-14	NA	101419200	101419414	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_101419200_101419400
m54284U_201217_021426/66322809/ccs	chr7	-	175	1	Intergenic	novelGene_3950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAGAATTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	95908635	95908460	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_95908500_95908600
m54284U_201217_021426/66324829/ccs	chr13	+	155	1	Intergenic	novelGene_6973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAATTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	14231006	14231161	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_14231000_14231200
m54284U_201217_021426/66389587/ccs	chr8	-	195	1	Intergenic	novelGene_4328	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATGGATCGATTTGCA	NA	False	NA	-3	True	NA	NA	NA	71189553	71189358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_71189400_71189600
m54284U_201217_021426/66521244/ccs	chr19	-	6492	1	Genic_Genomic	ENSMUSG00000006456.11	novel	NA	NA	NA	NA	10306	5854	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTTCCCGTTTTTTGT	NA	False	NA	-3	True	AATAAA	-19	NA	4851234	4844742	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_-_4844700_4851200
m54284U_201217_021426/66650530/ccs	chr12	-	193	1	Intergenic	novelGene_6599	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCTCTGTGCTTACTCAA	NA	False	NA	NA	False	NA	NA	NA	25138995	25138802	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_25138800_25139000
m54284U_201217_021426/66781392/ccs	chr4	+	5084	1	Genic_Genomic	ENSMUSG00000078503.10	novel	NA	NA	NA	NA	22857	3636	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGTGGAAAATGTGTT	5863	False	NA	14	True	NA	NA	NA	145264310	145269394	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_+_145264300_145269400
m54284U_201217_021426/66782251/ccs	chr6	-	154	1	Intergenic	novelGene_3365	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAGGTAAACAAA	8173	False	NA	NA	False	NA	NA	NA	86464032	86463878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_86463900_86464000
m54284U_201217_021426/66847072/ccs	chr1	-	183	1	Intergenic	novelGene_251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTACATTACAACAGTGT	NA	False	NA	NA	False	NA	NA	NA	93447249	93447066	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_93447100_93447200
m54284U_201217_021426/66847189/ccs	chr9	-	162	1	Intergenic	novelGene_5135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAGTTTATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	116107797	116107635	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_116107600_116107800
m54284U_201217_021426/66847942/ccs	chr1	-	5048	7	NIC	ENSMUSG00000051344.14	novel	8562	8	NA	NA	0	2082	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	10.6679686705368	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGTGTGATTACAGTGC	NA	False	NA	NA	False	NA	NA	NA	64967256	64830885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr1_-_64834374_64859094_64859253_64900345_64900410_64922287_64922482_64931910_64932057_64960708_64961642_64967191
m54284U_201217_021426/6684806/ccs	chr11	-	189	1	Intergenic	novelGene_6116	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGCTACCACACCCGG	NA	False	NA	NA	False	NA	NA	NA	80354849	80354660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80354700_80354800
m54284U_201217_021426/6685002/ccs	chr4	-	194	1	Intergenic	novelGene_2240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAGAAAAACCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	134976361	134976167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_134976200_134976400
m54284U_201217_021426/6685127/ccs	chr10	-	193	1	Intergenic	novelGene_5461	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATAGGTGAAATGAAAGG	6557	False	NA	NA	False	NA	NA	NA	81008362	81008169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_81008200_81008400
m54284U_201217_021426/6686783/ccs	chr7	-	191	1	Intergenic	novelGene_3997	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGTAGGGAGAAAGTG	NA	False	NA	NA	False	NA	NA	NA	102275414	102275223	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_102275200_102275400
m54284U_201217_021426/6687192/ccs	chr1	+	172	1	Intergenic	novelGene_204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTTTTTATTCTAGT	NA	False	NA	NA	False	NA	NA	NA	75619443	75619615	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_75619400_75619600
m54284U_201217_021426/66912494/ccs	chr19	-	3883	1	NIC	ENSMUSG00000045045.8	novel	2918	3	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGGTTTTTCGTCTCA	NA	False	NA	0	True	AATAAA	-18	NA	4665695	4661812	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4661800_4665700
m54284U_201217_021426/66913245/ccs	chr12	-	178	1	Intergenic	novelGene_6755	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACAAAATAATTTGTTCA	NA	False	NA	NA	False	NA	NA	NA	80504144	80503966	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_80504000_80504100
m54284U_201217_021426/67045886/ccs	chr3	+	176	1	Intergenic	novelGene_1378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGACTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	33848895	33849071	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_33848900_33849100
m54284U_201217_021426/67046059/ccs	chr1	-	189	1	Intergenic	novelGene_457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAGAGGGATGAGGAG	NA	False	NA	NA	False	NA	NA	NA	167124792	167124603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_167124600_167124800
m54284U_201217_021426/67110921/ccschrUn	chrUn_MU069435v1	-	252	1	Intergenic	novelGene_9749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAGCATTTGAAAAGCAGA	NA	False	NA	NA	False	AAGAAA	-43	NA	28001	27749	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_MU069435v1_-_27700_28000
m54284U_201217_021426/67111402/ccs	chr11	+	1334	1	Intergenic	novelGene_6358	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	103280239	103281573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_103280200_103281600
m54284U_201217_021426/67364/ccs	chr11	-	224	1	Intergenic	novelGene_6195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAACAAAAGAGTAGGGCA	3466	False	NA	NA	False	NA	NA	NA	88823827	88823603	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_88823600_88823800
m54284U_201217_021426/67437021/ccs	chr13	+	186	1	Intergenic	novelGene_7090	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAGAGAGAGAGATCTC	4711	False	NA	NA	False	NA	NA	NA	55277657	55277843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_55277700_55277800
m54284U_201217_021426/67438282/ccs	chr4	+	178	1	Intergenic	novelGene_2406	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACCACTGGTCTCTAGC	8081	False	NA	NA	False	NA	NA	NA	152084341	152084519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_152084300_152084500
m54284U_201217_021426/67438993/ccs	chr7	-	179	1	Intergenic	novelGene_3924	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	80603579	80603400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_80603400_80603600
m54284U_201217_021426/6751737/ccs	chr4	-	193	1	Intergenic	novelGene_1814	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAGCCAGATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	41051854	41051661	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_41051700_41051900
m54284U_201217_021426/6752854/ccs	chr6	-	173	1	Intergenic	novelGene_3540	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATAAATCTTT	NA	False	NA	NA	False	NA	NA	NA	133144190	133144017	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_133144000_133144200
m54284U_201217_021426/67569233/ccs	chr11	-	1353	1	FSM	ENSMUSG00000082087.5	ENSMUST00000122180.2	951	1	-32	-370	-32	370	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGCTGATGAGTAGATA	5824	False	NA	NA	False	AATAAA	-23	NA	40564715	40563362	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr11_-_40563400_40564700
m54284U_201217_021426/67699863/ccs	chr14	-	191	1	Intergenic	novelGene_7386	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGGTAGAACAGCGGC	NA	False	NA	NA	False	NA	NA	NA	31810506	31810315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_31810300_31810500
m54284U_201217_021426/67829986/ccs	chr13	+	176	1	Intergenic	novelGene_7289	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAGAAAAGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	106985931	106986107	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_106985900_106986100
m54284U_201217_021426/67832641/ccs	chr8	+	688	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	0	-97	0	97	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGACTCAGAGCTAAACAA	7117	False	NA	NA	False	AATAAA	-32	NA	19542951	19543639	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_19543000_19543600
m54284U_201217_021426/67895605/ccs	chr2	-	159	1	Intergenic	novelGene_1008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAATAAATAATAAAA	NA	False	NA	NA	False	NA	NA	NA	119626782	119626623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_119626600_119626800
m54284U_201217_021426/68092732/ccs	chr8	-	8013	24	NIC	ENSMUSG00000003316.15	novel	3511	25	NA	NA	0	1112	combination_of_known_splicesites	TRUE	canonical	0	0	junction_23	104.775482348321	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCGAATATTCTCTGTA	6428	False	NA	-10	True	AATAAA	-18	NA	111985848	111879940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111985402
m54284U_201217_021426/68093114/ccs	chr13	-	185	1	Intergenic	novelGene_7064	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCGAGTTATTCCGGGC	NA	False	NA	NA	False	NA	NA	NA	51174699	51174514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_51174500_51174700
m54284U_201217_021426/68225129/ccs	chr17	-	202	1	Intergenic	novelGene_8370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAACAACAAAAGAGTTA	NA	False	NA	NA	False	NA	NA	NA	13183412	13183210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_13183200_13183400
m54284U_201217_021426/68225699/ccs	chr12	-	182	1	Intergenic	novelGene_6601	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATATTACCCTTAAATTAC	NA	False	NA	NA	False	NA	NA	NA	25980918	25980736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_25980700_25980900
m54284U_201217_021426/68289750/ccs	chr15	-	189	1	Intergenic	novelGene_8011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTAACTGCTCTTCCA	NA	False	NA	NA	False	NA	NA	NA	102383580	102383391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102383400_102383600
m54284U_201217_021426/68290437/ccs	chr14	-	177	1	Intergenic	novelGene_7463	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTAAAAAGAGAGAGAGA	8685	False	NA	NA	False	NA	NA	NA	54898902	54898725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_54898700_54898900
m54284U_201217_021426/68420746/ccs	chr5	-	209	1	Intergenic	novelGene_2725	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTGGGAGAGAACATAT	NA	False	NA	NA	False	NA	NA	NA	106946552	106946343	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_106946300_106946600
m54284U_201217_021426/68422374/ccs	chr17	+	153	1	Intergenic	novelGene_8507	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAAAATTTTAA	NA	False	NA	NA	False	NA	NA	NA	31339767	31339920	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_31339800_31339900
m54284U_201217_021426/68485582/ccs	chrX	+	200	1	Intergenic	novelGene_9404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAGGTGTGGAACACAT	NA	False	NA	NA	False	NA	NA	NA	20190002	20190202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_20190000_20190200
m54284U_201217_021426/68486214/ccs	chr6	-	171	1	Intergenic	novelGene_3112	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAAGC	NA	False	NA	NA	False	NA	NA	NA	18569794	18569623	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_18569600_18569800
m54284U_201217_021426/68487535/ccs	chr11	-	2623	10	NNC	ENSMUSG00000041654.16	novel	2688	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	183.659171723126	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTCCGTGCGATC	7766	False	NA	-2	True	AATAAA	-19	NA	113456585	113135678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_113136692_113136717_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113452831_113452951_113456501
m54284U_201217_021426/68684503/ccs	chr8	+	175	1	Intergenic	novelGene_4536	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAACCCAGTCAT	NA	False	NA	NA	False	NA	NA	NA	118369344	118369519	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_118369300_118369500
m54284U_201217_021426/68748193/ccs	chr8	-	233	1	Intergenic	novelGene_4266	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGCGACCATGAGTCA	NA	False	NA	NA	False	NA	NA	NA	34460777	34460544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_34460500_34460800
m54284U_201217_021426/68814280/ccs	chr11	+	199	1	Intergenic	novelGene_5665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	481	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTTAAGCATTGACAG	NA	False	NA	NA	False	NA	NA	NA	4537931	4538130	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_4537900_4538100
m54284U_201217_021426/68944102/ccs	chr11	-	175	1	Intergenic	novelGene_6462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCAAGCAAGTTAGGGTG	3210	False	NA	NA	False	NA	NA	NA	115642017	115641842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115641800_115642000
m54284U_201217_021426/68946221/ccs	chr8	+	181	1	Intergenic	novelGene_4509	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGCAACCTCTCCAGC	NA	False	NA	NA	False	NA	NA	NA	112130734	112130915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_112130700_112130900
m54284U_201217_021426/68946246/ccs	chr11	+	153	1	Intergenic	novelGene_5927	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGTTCCTCATGTAGTCA	NA	False	NA	NA	False	NA	NA	NA	68550229	68550382	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_68550200_68550400
m54284U_201217_021426/69011171/ccs	chr13	-	177	1	Intergenic	novelGene_7024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATGTGTGAATGCA	NA	False	NA	-2	True	NA	NA	NA	38268018	38267841	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_38267800_38268000
m54284U_201217_021426/69011767/ccs	chr17	-	176	1	Intergenic	novelGene_8474	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAATTTAAAAGTGC	NA	False	NA	NA	False	NA	NA	NA	29207989	29207813	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_29207800_29208000
m54284U_201217_021426/69141151/ccs	chrX	-	177	1	Intergenic	novelGene_9453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	47758428	47758251	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_47758300_47758400
m54284U_201217_021426/69142157/ccs	chr17	+	195	1	Intergenic	novelGene_8382	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTAAGTTACACCTTGAT	2515	False	NA	NA	False	NA	NA	NA	17123885	17124080	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_17123900_17124100
m54284U_201217_021426/69142404/ccs	chr8	-	234	1	Intergenic	novelGene_4206	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATTTTTGAAAGTGGA	NA	False	NA	NA	False	NA	NA	NA	13203368	13203134	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_13203100_13203400
m54284U_201217_021426/69206923/ccs	chr19	-	180	1	Intergenic	novelGene_9237	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAATCCCCCAATATG	5857	False	NA	-2	True	NA	NA	NA	37347780	37347600	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_37347600_37347800
m54284U_201217_021426/69207686/ccs	chr18	+	172	1	Intergenic	novelGene_8845	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAACCCAAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	24858957	24859129	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_24859000_24859100
m54284U_201217_021426/69271954/ccs	chrX	-	177	1	Intergenic	novelGene_9462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGACTTAAAAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	51815327	51815150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_51815200_51815300
m54284U_201217_021426/69272462/ccs	chr15	-	157	1	Intergenic	novelGene_7973	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAGAAAGAAAAGGG	NA	False	NA	NA	False	NA	NA	NA	99729385	99729228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_99729200_99729400
m54284U_201217_021426/69337468/ccs	chr19	-	182	1	Intergenic	novelGene_9106	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTATGTGGCCGGTTGGT	9452	False	NA	NA	False	NA	NA	NA	5836359	5836177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_5836200_5836400
m54284U_201217_021426/69404174/ccs	chr4	-	177	1	Intergenic	novelGene_1800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTTGATTATGGAGTG	NA	False	NA	NA	False	NA	NA	NA	35232262	35232085	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_35232100_35232300
m54284U_201217_021426/69405096/ccs	chr6	-	4077	22	NNC	ENSMUSG00000012535.15	novel	3989	23	NA	NA	0	0	intron_retention	FALSE	canonical	3	17	junction_4	182.384620129725	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTGTTTTTATTTCCC	23	True	NA	-2	True	TTTAAA	-5	NA	29609818	29540825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554980_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586144_29589027_29589229_29609364
m54284U_201217_021426/69468956/ccs	chr7	-	195	1	Intergenic	novelGene_3740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGGTTTAACACATAACA	NA	False	NA	NA	False	NA	NA	NA	28157286	28157091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28157100_28157300
m54284U_201217_021426/6948810/ccs	chr2	-	188	1	Intergenic	novelGene_893	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAATGAAGGGAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	83546465	83546277	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_83546300_83546500
m54284U_201217_021426/69534928/ccs	chr11	+	213	1	Intergenic	novelGene_6452	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTGTCTTTTGTT	6452	False	NA	NA	False	NA	NA	NA	115419279	115419492	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_115419300_115419500
m54284U_201217_021426/69536179/ccs	chr4	+	206	1	Intergenic	novelGene_2218	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCCCTCGAGACT	NA	False	NA	NA	False	NA	NA	NA	133301055	133301261	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_133301100_133301300
m54284U_201217_021426/69536601/ccs	chr17	-	1824	13	NNC	ENSMUSG00000002658.10	novel	1717	13	NA	NA	-110	0	at_least_one_novel_splicesite	FALSE	canonical	2	34	junction_6	168.206222635589	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGTGCGAGTCATCA	NA	False	NA	-6	True	AATAAA	-13	NA	57318398	57310404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311570_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
m54284U_201217_021426/69730394/ccs	chr19	-	3036	4	NIC	ENSMUSG00000096370.9	novel	1434	3	NA	NA	0	-501	combination_of_known_splicesites	TRUE	canonical	2	4	junction_2	29.9146935282461	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTGTGAGATGTTCTT	8187	False	NA	NA	False	AATAAA	-24	NA	4861240	4835681	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_4838071_4842425_4842849_4843854_4844038_4861199
m54284U_201217_021426/69732855/ccs	chrX	-	174	1	Intergenic	novelGene_9594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAATGTTCCCTTTTG	NA	False	NA	NA	False	NA	NA	NA	103155528	103155354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_103155400_103155500
m54284U_201217_021426/69733054/ccs	chr15	+	180	1	Intergenic	novelGene_7618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTTTAAAAATTTT	1990	False	NA	NA	False	NA	NA	NA	8115663	8115843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_8115700_8115800
m54284U_201217_021426/69733099/ccs	chr2	-	158	1	Intergenic	novelGene_1033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAATACT	NA	False	NA	NA	False	NA	NA	NA	121741226	121741068	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_121741100_121741200
m54284U_201217_021426/69929796/ccs	chr10	-	319	1	Intergenic	novelGene_5409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATTAGAACCAGAAGTG	NA	False	NA	NA	False	NA	NA	NA	75454817	75454498	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75454500_75454800
m54284U_201217_021426/7012817/ccs	chr16	-	221	1	Intergenic	novelGene_8223	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	497	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAGGACTCAAACAGCGG	NA	False	NA	NA	False	NA	NA	NA	32923621	32923400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_32923400_32923600
m54284U_201217_021426/7013985/ccs	chr5	-	181	1	Intergenic	novelGene_2470	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATAACATA	NA	False	NA	NA	False	NA	NA	NA	20835090	20834909	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_20834900_20835100
m54284U_201217_021426/7014188/ccs	chr5	-	181	1	Intergenic	novelGene_2818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAAAACAAAAAATAATTAC	NA	False	NA	NA	False	NA	NA	NA	117211550	117211369	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_117211400_117211600
m54284U_201217_021426/70190480/ccs	chr2	-	184	1	Intergenic	novelGene_1040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACATTTATTTCTTAATT	NA	False	NA	NA	False	NA	NA	NA	122012356	122012172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_122012200_122012400
m54284U_201217_021426/70320580/ccs	chr14	+	188	1	Intergenic	novelGene_7502	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCTGAAACTATGTCAA	9125	False	NA	NA	False	NA	NA	NA	61657585	61657773	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_61657600_61657800
m54284U_201217_021426/70386088/ccs	chr3	-	183	1	Intergenic	novelGene_1590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGGAGGAG	NA	False	NA	0	True	NA	NA	NA	97905521	97905338	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_97905300_97905500
m54284U_201217_021426/70386808/ccs	chr7	+	323	1	FSM	ENSMUSG00000085105.3	ENSMUST00000205940.2	1112	1	924	-135	924	135	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAACAAAACAAACAAACA	NA	False	NA	NA	False	NA	NA	NA	33934789	33935112	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr7_+_33934800_33935100
m54284U_201217_021426/70387276/ccs	chr11	+	177	1	Intergenic	novelGene_5880	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGTAAAAGGAAAGAAAGAAA	292	False	NA	NA	False	NA	NA	NA	59948527	59948704	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_59948500_59948700
m54284U_201217_021426/70453284/ccs	chr17	-	188	1	Intergenic	novelGene_8650	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTTTAATTGGGACTGG	NA	False	NA	NA	False	NA	NA	NA	56345136	56344948	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_56344900_56345100
m54284U_201217_021426/70583842/ccs	chr9	-	5298	1	Intergenic	novelGene_4953	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAATTGTCTTAGCTCC	183	False	NA	NA	False	NA	NA	NA	75643046	75637748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_75637700_75643000
m54284U_201217_021426/70714603/ccs	chr14	-	158	1	Intergenic	novelGene_7467	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	55392213	55392055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_55392100_55392200
m54284U_201217_021426/70715140/ccs	chr9	-	180	1	Intergenic	novelGene_4756	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAATTAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	49115876	49115696	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_49115700_49115900
m54284U_201217_021426/70780193/ccs	chr16	-	183	1	Intergenic	novelGene_8242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATATTATTATTAATAG	262	False	NA	NA	False	AATATA	-2	NA	35771110	35770927	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_35770900_35771100
m54284U_201217_021426/70780232/ccs	chrX	-	188	1	Intergenic	novelGene_9626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	370	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAGGAAGGAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	129068218	129068030	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_129068000_129068200
m54284U_201217_021426/7080365/ccs	chr11	+	196	1	Intergenic	novelGene_5951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCACCCTGACTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	69710169	69710365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69710200_69710400
m54284U_201217_021426/70910424/ccs	chr5	-	172	1	Intergenic	novelGene_3030	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGATATGACTCG	5230	False	NA	NA	False	NA	NA	NA	142496579	142496407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_142496400_142496600
m54284U_201217_021426/71041334/ccs	chr9	-	184	1	Intergenic	novelGene_4941	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAATTAAAAACAATCAA	NA	False	NA	NA	False	NA	NA	NA	72899282	72899098	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72899100_72899300
m54284U_201217_021426/71107111/ccs	chr7	-	180	1	Intergenic	novelGene_3978	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTGCAGGGGGGGA	NA	False	NA	NA	False	NA	NA	NA	100423711	100423531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_100423500_100423700
m54284U_201217_021426/71237807/ccs	chr16	-	203	1	Intergenic	novelGene_8080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTGTTTTAAGTGAGAA	NA	False	NA	NA	False	NA	NA	NA	13808979	13808776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_13808800_13809000
m54284U_201217_021426/71237922/ccs	chr8	+	181	1	FSM	ENSMUSG00000069862.7	ENSMUST00000139165.2	399	1	265	-47	265	47	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCCTACATTTCAGC	NA	False	NA	NA	False	AATAAA	-43	NA	123933626	123933807	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_123933600_123933800
m54284U_201217_021426/71238982/ccs	chr11	-	198	1	Intergenic	novelGene_6156	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTTTATTTGTCTTAT	NA	False	NA	NA	False	NA	NA	NA	86516256	86516058	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_86516100_86516300
m54284U_201217_021426/71303349/ccs	chr5	-	176	1	Intergenic	novelGene_2856	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAACAAAACAA	NA	False	NA	NA	False	NA	NA	NA	121727659	121727483	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_121727500_121727700
m54284U_201217_021426/71434566/ccs	chr18	-	175	1	Intergenic	novelGene_8838	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTGGAAAACCAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	21211164	21210989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_21211000_21211200
m54284U_201217_021426/71565365/ccs	chr17	-	152	1	Intergenic	novelGene_8647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTACTATACACATGCTA	NA	False	NA	NA	False	NA	NA	NA	53967529	53967377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_53967400_53967500
m54284U_201217_021426/71566699/ccs	chr10	+	189	1	Intergenic	novelGene_5219	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTAAAAATGATTTATTT	NA	False	NA	NA	False	NA	NA	NA	20247054	20247243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_20247100_20247200
m54284U_201217_021426/71567260/ccs	chr9	-	3389	1	Genic_Genomic	ENSMUSG00000099051.2_ENSMUSG00000098573.2	novel	NA	NA	NA	NA	627	-1581	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAGGAAGGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	72526175	72522786	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_-_72522800_72526200
m54284U_201217_021426/71631668/ccs	chr3	-	1986	1	Genic_Genomic	ENSMUSG00000028070.8	novel	NA	NA	NA	NA	-10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGTCTTCTGGCCTTAA	NA	False	NA	-4	True	AATAAA	-25	NA	87965812	87963826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr3_-_87963800_87965800
m54284U_201217_021426/71632378/ccs	chrX	-	173	1	Intergenic	novelGene_9431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAAAGTGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	37636607	37636434	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_37636400_37636600
m54284U_201217_021426/71697425/ccs	chr7	-	2373	5	NIC	ENSMUSG00000030678.8	novel	2282	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_4	286.521705111498	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAGTTCCTAAGTTAT	NA	False	NA	-27	True	AATAAA	-18	NA	126626209	126621301	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625487_126626122
m54284U_201217_021426/71763084/ccs	chr19	+	3011	1	Genic_Genomic	ENSMUSG00000024639.6	novel	NA	NA	NA	NA	165876	1055	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGTACTATAGTATTC	3561	False	NA	3	True	AATACA	-15	NA	16362871	16365882	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_+_16362900_16365900
m54284U_201217_021426/71828068/ccs	chr8	-	186	1	Intergenic	novelGene_4335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGAAAAGCTAGACAGGG	789	False	NA	NA	False	NA	NA	NA	72997557	72997371	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_72997400_72997600
m54284U_201217_021426/71829873/ccs	chr14	+	300	1	Intergenic	novelGene_7520	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTTTAAAAAACTT	NA	False	NA	NA	False	NA	NA	NA	67205878	67206178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_67205900_67206200
m54284U_201217_021426/71894641/ccs	chr2	-	147	1	Intergenic	novelGene_828	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTAAACAAAGGAAGG	NA	False	NA	-1	True	NA	NA	NA	69507780	69507633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_69507600_69507800
m54284U_201217_021426/71895169/ccs	chr9	-	194	1	Intergenic	novelGene_4885	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGAACTCAGGACCTCT	505	False	NA	NA	False	NA	NA	NA	65512207	65512013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_65512000_65512200
m54284U_201217_021426/71959900/ccs	chr17	+	229	1	Intergenic	novelGene_8465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGTTTAGGAGGAGAAAA	4896	False	NA	NA	False	NA	NA	NA	28822638	28822867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_28822600_28822900
m54284U_201217_021426/71959946/ccs	chrX	+	188	1	Intergenic	novelGene_9720	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTATATGGTATGAAGAA	NA	False	NA	NA	False	NA	NA	NA	161548454	161548642	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_161548500_161548600
m54284U_201217_021426/7211410/ccs	chr1	-	186	1	Intergenic	novelGene_113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCAGTAAGAGACAAGAC	NA	False	NA	NA	False	NA	NA	NA	47065402	47065216	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_47065200_47065400
m54284U_201217_021426/721456/ccs	chr14	-	3183	9	NIC	ENSMUSG00000037526.8	novel	3729	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	47.8394123605213	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCTGTGTGTGTCTGTC	NA	False	NA	-4	True	AATAAA	-14	NA	47805861	47778349	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47792016_47792099_47796630_47796674_47798077_47798141_47805642
m54284U_201217_021426/72352455/ccs	chrX	+	195	1	Intergenic	novelGene_9734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	165184567	165184762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_165184600_165184800
m54284U_201217_021426/72353153/ccs	chr12	-	188	1	Intergenic	novelGene_6533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTTTCAGAGCTAAACAA	NA	False	NA	NA	False	NA	NA	NA	3542548	3542360	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_3542400_3542500
m54284U_201217_021426/72354441/ccs	chr4	-	216	1	Intergenic	novelGene_2138	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACCAACACAGCAAAGCCAT	NA	False	NA	NA	False	AATAAA	-24	NA	128964216	128964000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_128964000_128964200
m54284U_201217_021426/72418047/ccs	chr2	-	183	1	Intergenic	novelGene_1254	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGACTTGTGGCTTGG	NA	False	NA	5	True	NA	NA	NA	167879859	167879676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_167879700_167879900
m54284U_201217_021426/72483072/ccs	chr1	-	180	1	Intergenic	novelGene_313	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAAAATGGAAGGGAG	NA	False	NA	NA	False	NA	NA	NA	132335391	132335211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_132335200_132335400
m54284U_201217_021426/72548472/ccs	chr8	-	204	1	Intergenic	novelGene_4280	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATATATATATGTT	NA	False	NA	NA	False	TTTAAA	-10	NA	43846694	43846490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_43846500_43846700
m54284U_201217_021426/72549974/ccs	chr15	-	186	1	Intergenic	novelGene_7938	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTTGGCAGTGTGGTA	9858	False	NA	NA	False	NA	NA	NA	98557911	98557725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98557700_98557900
m54284U_201217_021426/72614218/ccs	chr19	-	140	1	Intergenic	novelGene_9117	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGGCATTGAATCCCA	NA	False	NA	NA	False	AATAAA	-20	NA	6193630	6193490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_6193500_6193600
m54284U_201217_021426/72746718/ccs	chr1	+	185	1	Intergenic	novelGene_333	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAATGAGTTCCA	NA	False	NA	NA	False	NA	NA	NA	135099035	135099220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_135099000_135099200
m54284U_201217_021426/72747157/ccs	chr16	-	201	1	Intergenic	novelGene_8093	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTAAGTTTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	16605562	16605361	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_16605400_16605600
m54284U_201217_021426/7275551/ccs	chr3	-	184	1	Intergenic	novelGene_1407	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAAAGTTGGTTTGAAT	NA	False	NA	NA	False	NA	NA	NA	53221631	53221447	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_53221400_53221600
m54284U_201217_021426/72810572/ccs	chr11	-	180	1	Intergenic	novelGene_6493	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATTGAAATGGA	3908	False	NA	NA	False	NA	NA	NA	117815215	117815035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_117815000_117815200
m54284U_201217_021426/72877043/ccs	chr13	-	1453	1	Intergenic	novelGene_7061	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAGGCTACAGTTTCAC	NA	False	NA	NA	False	NA	NA	NA	49594761	49593308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_49593300_49594800
m54284U_201217_021426/72944228/ccs	chr8	+	100	1	Intergenic	novelGene_4195	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATGTTTGCCAAAAATTT	NA	False	NA	NA	False	NA	NA	NA	9612548	9612648	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_9612500_9612600
m54284U_201217_021426/73073725/ccs	chr1	-	192	1	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTCACTATAAAAGTAG	NA	False	NA	NA	False	NA	NA	NA	9765049	9764857	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_9764900_9765000
m54284U_201217_021426/73206165/ccs	chr6	+	222	1	Intergenic	novelGene_3513	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTTAAAAAGAAGCAAGCA	NA	False	NA	NA	False	NA	NA	NA	125360621	125360843	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_125360600_125360800
m54284U_201217_021426/73334980/ccs	chr16	-	194	1	Intergenic	novelGene_8148	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTACATATTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	20745594	20745400	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_20745400_20745600
m54284U_201217_021426/73400404/ccs	chr15	-	184	1	Intergenic	novelGene_7769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAATTATAGCCAGATGG	NA	False	NA	NA	False	NA	NA	NA	76033062	76032878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76032900_76033100
m54284U_201217_021426/7341996/ccs	chr5	+	193	1	Intergenic	novelGene_2898	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAATTAAAAAAAAAACAC	6556	False	NA	NA	False	NA	NA	NA	124547861	124548054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_124547900_124548100
m54284U_201217_021426/7342582/ccs	chr5	-	210	1	Intergenic	novelGene_2918	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	378	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTATTTTGTGCTGTT	NA	False	NA	-2	True	TTTAAA	-11	NA	125443059	125442849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_125442800_125443100
m54284U_201217_021426/7342911/ccs	chr9	+	203	1	Intergenic	novelGene_5142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATTTTTAATAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	119004331	119004534	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_119004300_119004500
m54284U_201217_021426/73466736/ccs	chr4	-	188	1	Intergenic	novelGene_1957	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCACTCATAGTAAGTGA	NA	False	NA	NA	False	NA	NA	NA	100910361	100910173	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_100910200_100910400
m54284U_201217_021426/73664425/ccs	chr15	-	184	1	Intergenic	novelGene_7722	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAAAAATTCCTTGT	NA	False	NA	NA	False	NA	NA	NA	57573532	57573348	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_57573300_57573500
m54284U_201217_021426/73665295/ccs	chr1	-	176	1	Intergenic	novelGene_139	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTATTTATTT	NA	False	NA	NA	False	NA	NA	NA	59626352	59626176	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_59626200_59626400
m54284U_201217_021426/73728494/ccs	chr17	-	187	1	Intergenic	novelGene_8710	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAAGAGTAATATTCCTA	NA	False	NA	NA	False	NA	NA	NA	71342875	71342688	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_71342700_71342900
m54284U_201217_021426/73730712/ccs	chr1	+	168	1	Intergenic	novelGene_177	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTTTAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	72676139	72676307	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_72676100_72676300
m54284U_201217_021426/73794150/ccs	chr2	+	7686	1	FSM	ENSMUSG00002076469.1	ENSMUST00020182820.1	64	1	-115	-7507	-115	7507	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTACCTCAGCACCAGC	7431	False	NA	NA	False	NA	NA	NA	174128285	174135971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_+_174128300_174136000
m54284U_201217_021426/73794283/ccs	chr3	-	3467	28	NIC	ENSMUSG00000042520.17	novel	3509	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	305.44411884888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTCACCTTAATGTGC	3507	False	NA	-9	True	AATAAA	-21	NA	89959822	89907446	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
m54284U_201217_021426/73795706/ccs	chr2	+	165	1	Intergenic	novelGene_602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTAAATATCCAGGT	NA	False	NA	NA	False	NA	NA	NA	17939727	17939892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_17939700_17939900
m54284U_201217_021426/73860126/ccs	chr4	-	189	1	Intergenic	novelGene_2031	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAACCATTGAGATGG	NA	False	NA	NA	False	NA	NA	NA	116686246	116686057	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116686100_116686200
m54284U_201217_021426/73860873/ccs	chr7	-	193	1	Intergenic	novelGene_3899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAGAAAGAAAGT	NA	False	NA	NA	False	NA	NA	NA	79039716	79039523	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_79039500_79039700
m54284U_201217_021426/73927353/ccs	chr9	-	181	1	Intergenic	novelGene_4931	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTAACAGCAATGTTCCT	4720	False	NA	NA	False	NA	NA	NA	72506243	72506062	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72506100_72506200
m54284U_201217_021426/73991415/ccs	chr4	-	167	1	Intergenic	novelGene_2279	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTATTTATTTAGAAAA	NA	False	NA	NA	False	NA	NA	NA	138158442	138158275	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_138158300_138158400
m54284U_201217_021426/74056053/ccs	chr14	-	2682	1	NIC	ENSMUSG00000046753.11	novel	4262	18	NA	NA	-7767	-6549	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGAGGAGTTGGAGTTT	NA	False	NA	NA	False	TATAAA	-15	NA	27213599	27210917	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_27210900_27213600
m54284U_201217_021426/74057580/ccs	chr17	-	158	1	Intergenic	novelGene_8742	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAGAAAAAAGAAGAAGCA	NA	False	NA	NA	False	NA	NA	NA	80532369	80532211	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_80532200_80532400
m54284U_201217_021426/7406100/ccs	chr8	-	189	1	Intergenic	novelGene_4594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCTATACAGTGAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	124598389	124598200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124598200_124598400
m54284U_201217_021426/7406180/ccs	chr18	-	177	1	Intergenic	novelGene_9051	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTTTTTTAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	82164430	82164253	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_82164300_82164400
m54284U_201217_021426/7407343/ccs	chr4	-	173	1	Intergenic	novelGene_2403	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCCATGAGGCCTCAAC	2484	False	NA	NA	False	NA	NA	NA	150797117	150796944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_150796900_150797100
m54284U_201217_021426/7407700/ccs	chr1	-	189	1	Intergenic	novelGene_412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	357	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	156504692	156504503	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_156504500_156504700
m54284U_201217_021426/7407737/ccs	chr11	+	232	1	Intergenic	novelGene_6366	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATCCTGAGATTTTTAA	NA	False	NA	NA	False	NA	NA	NA	104203493	104203725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_104203500_104203700
m54284U_201217_021426/74122654/ccs	chr1	+	238	1	Intergenic	novelGene_431	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAAAATATGTTTTGAA	NA	False	NA	NA	False	AATAAA	-32	NA	160849720	160849958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_160849700_160850000
m54284U_201217_021426/74188041/ccs	chr11	+	155	1	Intergenic	novelGene_6350	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAACTATCAAATCAA	NA	False	NA	NA	False	NA	NA	NA	102078215	102078370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_102078200_102078400
m54284U_201217_021426/74189415/ccs	chr7	-	176	1	Intergenic	novelGene_3884	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCCAGAGTGAGTGGGGC	NA	False	NA	NA	False	NA	NA	NA	67869855	67869679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_67869700_67869900
m54284U_201217_021426/74318197/ccs	chr10	-	175	1	Intergenic	novelGene_5592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTCTTTTTTAAAG	NA	False	NA	NA	False	NA	NA	NA	126220402	126220227	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_126220200_126220400
m54284U_201217_021426/74320079/ccs	chrX	-	176	1	Intergenic	novelGene_9527	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAATAAAATAAAATA	NA	False	NA	NA	False	NA	NA	NA	91166965	91166789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_91166800_91167000
m54284U_201217_021426/74320560/ccs	chr1	-	202	1	Intergenic	novelGene_327	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATTAGACAACATTATA	NA	False	NA	NA	False	NA	NA	NA	134376431	134376229	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_134376200_134376400
m54284U_201217_021426/74384511/ccs	chr14	+	193	1	Intergenic	novelGene_7471	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	55842770	55842963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_55842800_55843000
m54284U_201217_021426/74385243/ccs	chr6	+	179	1	Intergenic	novelGene_3204	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAGAGAGGGCTGT	3517	False	NA	NA	False	NA	NA	NA	38372886	38373065	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38372900_38373100
m54284U_201217_021426/74385305/ccs	chr6	-	177	1	Intergenic	novelGene_3479	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTGAGACAG	8872	False	NA	NA	False	NA	NA	NA	122626503	122626326	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_122626300_122626500
m54284U_201217_021426/74385951/ccs	chr1	-	188	1	Intergenic	novelGene_200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCACAGTGATCCTGG	NA	False	NA	NA	False	NA	NA	NA	75388804	75388616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_75388600_75388800
m54284U_201217_021426/74386139/ccs	chr1	+	3878	1	Antisense	novelGene_ENSMUSG00000026219.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAACTTAACCGAAAAATAAA	5514	False	NA	NA	False	NA	NA	NA	84715882	84719760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_84715900_84719800
m54284U_201217_021426/74517008/ccs	chr16	+	167	1	Genic_Genomic	ENSMUSG00000116957.2	novel	NA	NA	NA	NA	1827	27	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTATTTAAAAAAAAATAAGA	NA	False	NA	NA	False	NA	NA	NA	32372386	32372553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr16_+_32372400_32372600
m54284U_201217_021426/74581759/ccs	chr2	-	202	1	Intergenic	novelGene_764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGAAGAATAAATCGTGT	8129	False	NA	NA	False	AAGAAA	-4	NA	37253858	37253656	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_37253700_37253900
m54284U_201217_021426/74645928/ccs	chr10	-	201	1	Intergenic	novelGene_5574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCATGGAAATGCTATAA	NA	False	NA	NA	False	AAAAAG	-8	NA	120348691	120348490	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_120348500_120348700
m54284U_201217_021426/74711617/ccs	chr2	-	186	1	Intergenic	novelGene_1113	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTTTAAAGAAAAAGAA	8456	False	NA	NA	False	NA	NA	NA	150866618	150866432	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_150866400_150866600
m54284U_201217_021426/74712213/ccs	chr16	-	178	1	Intergenic	novelGene_8315	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAATGTTAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	90089850	90089672	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_90089700_90089800
m54284U_201217_021426/74712432/ccs	chr7	-	4691	1	Genic_Genomic	ENSMUSG00000090744.8	novel	NA	NA	NA	NA	14814	4383	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATCTGGCTGTACTTTG	NA	False	NA	NA	False	AATATA	-11	NA	41195405	41190714	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_-_41190700_41195400
m54284U_201217_021426/7472681/ccs	chr3	-	253	1	Intergenic	novelGene_1533	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGTTTTG	5809	False	NA	NA	False	NA	NA	NA	89898703	89898450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_89898400_89898700
m54284U_201217_021426/74779344/ccs	chr1	+	3213	1	FSM	ENSMUSG00000084799.8	ENSMUST00000186786.2	1236	1	375	-2352	0	2352	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	63153629	63156842	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_+_63153600_63156800
m54284U_201217_021426/74843170/ccs	chr16	+	378	1	Intergenic	novelGene_8286	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	597	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCATGGCGTGTGTGTGG	NA	False	NA	NA	False	NA	NA	NA	57211661	57212039	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_57211700_57212000
m54284U_201217_021426/74907672/ccs	chrX	-	167	1	Intergenic	novelGene_9363	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTTTTAAAAAAGAATAT	NA	False	NA	NA	False	NA	NA	NA	7543874	7543707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_7543700_7543900
m54284U_201217_021426/74974923/ccs	chr6	+	4080	1	NIC	ENSMUSG00000030231.12	novel	7382	31	NA	NA	-34	-124824	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATGTGTATATTTTCAT	NA	False	NA	NA	False	AATAGA	-14	NA	140369851	140373931	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_+_140369900_140373900
m54284U_201217_021426/75041339/ccs	chr4	-	185	1	Intergenic	novelGene_2242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGGAGAGACCCAATT	NA	False	NA	NA	False	NA	NA	NA	135031522	135031337	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_135031300_135031500
m54284U_201217_021426/75104611/ccs	chr13	-	218	1	Intergenic	novelGene_6963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACAAAAGAACTAAGTAG	NA	False	NA	NA	False	AAAAAG	-7	NA	9403622	9403404	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_9403400_9403600
m54284U_201217_021426/75170447/ccs	chr5	-	180	1	Intergenic	novelGene_2868	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACTGAAAACTAAAACCAA	NA	False	NA	NA	False	NA	NA	NA	122404289	122404109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_122404100_122404300
m54284U_201217_021426/75172675/ccs	chr4	-	175	1	Intergenic	novelGene_2085	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAATAGTCAAATTGTT	NA	False	NA	NA	False	NA	NA	NA	123225191	123225016	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_123225000_123225200
m54284U_201217_021426/75236325/ccs	chr19	-	208	1	Intergenic	novelGene_9081	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGGAAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	4360395	4360187	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4360200_4360400
m54284U_201217_021426/7537438/ccs	chr5	-	197	1	Intergenic	novelGene_2641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATGCATTGTGTACT	NA	False	NA	NA	False	NA	NA	NA	79313724	79313527	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_79313500_79313700
m54284U_201217_021426/7537773/ccs	chr16	-	178	1	Intergenic	novelGene_8290	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAGTTAGTCTGGA	NA	False	NA	NA	False	NA	NA	NA	62600672	62600494	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_62600500_62600700
m54284U_201217_021426/7539096/ccs	chr11	+	196	1	Intergenic	novelGene_5753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAAACACAAAGACC	NA	False	NA	NA	False	NA	NA	NA	26222482	26222678	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_26222500_26222700
m54284U_201217_021426/7539267/ccs	chr2	+	190	1	Intergenic	novelGene_661	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGACTGAGACAGTATT	NA	False	NA	NA	False	NA	NA	NA	28949261	28949451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_28949300_28949500
m54284U_201217_021426/75432095/ccs	chr6	-	188	1	Intergenic	novelGene_3100	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATCAAAGTAAAAGGAAA	NA	False	NA	NA	False	NA	NA	NA	4564607	4564419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_4564400_4564600
m54284U_201217_021426/75432895/ccs	chr12	-	102	1	Intergenic	novelGene_6834	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTATGCAGCAACTAGG	NA	False	NA	31	True	NA	NA	NA	92428992	92428890	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_92428900_92429000
m54284U_201217_021426/75498320/ccs	chr8	-	180	1	Intergenic	novelGene_4620	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCCATCCTACCAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	129705912	129705732	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_129705700_129705900
m54284U_201217_021426/75628731/ccs	chr9	-	1400	1	Intergenic	novelGene_4679	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATATTGTATCTTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	25163708	25162308	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_25162300_25163700
m54284U_201217_021426/75629636/ccs	chr16	-	196	1	Intergenic	novelGene_8060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCGTTGTAGTATTAAAT	NA	False	NA	NA	False	TTTAAA	-4	NA	11092096	11091900	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_11091900_11092100
m54284U_201217_021426/75630686/ccs	chr12	-	180	1	Intergenic	novelGene_6670	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATTAGATCAAACA	NA	False	NA	NA	False	NA	NA	NA	63439887	63439707	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_63439700_63439900
m54284U_201217_021426/75826421/ccs	chr16	+	195	1	Intergenic	novelGene_8161	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTGCTTTGTTTTTTG	NA	False	NA	NA	False	NA	NA	NA	22035793	22035988	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_22035800_22036000
m54284U_201217_021426/75893103/ccs	chr1	-	155	1	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAATAAATCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	9916070	9915915	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_9915900_9916100
m54284U_201217_021426/75957732/ccs	chr11	+	183	1	Intergenic	novelGene_6268	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCTATTATTTATTAAAA	NA	False	NA	NA	False	NA	NA	NA	97199314	97199497	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97199300_97199500
m54284U_201217_021426/7602382/ccs	chr1	-	179	1	Intergenic	novelGene_232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTACAGCCGGGCGTGGT	NA	False	NA	NA	False	NA	NA	NA	86513473	86513294	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_86513300_86513500
m54284U_201217_021426/76219414/ccs	chr1	-	160	1	Intergenic	novelGene_103	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATTTTAAACACATTAG	7926	False	NA	NA	False	NA	NA	NA	43133937	43133777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_43133800_43133900
m54284U_201217_021426/76349505/ccs	chr4	+	2989	1	Intergenic	novelGene_2334	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTATCCTGATTTTTTTA	NA	False	NA	18	True	ATTAAA	-20	NA	145986619	145989608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_145986600_145989600
m54284U_201217_021426/76350060/ccs	chrX	+	183	1	Intergenic	novelGene_9449	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAAAATAAAATCTCTA	NA	False	NA	NA	False	NA	NA	NA	47597960	47598143	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_47598000_47598100
m54284U_201217_021426/76483035/ccs	chrX	+	251	1	Intergenic	novelGene_9564	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTCAGTGGTAGAGCCC	NA	False	NA	NA	False	AATAAA	-19	NA	100706332	100706583	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100706300_100706600
m54284U_201217_021426/7667730/ccs	chr4	+	175	1	Intergenic	novelGene_2282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCCCGAGTAATAATAATA	NA	False	NA	3	True	NA	NA	NA	138551717	138551892	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_138551700_138551900
m54284U_201217_021426/76679216/ccs	chr19	+	199	1	Intergenic	novelGene_9211	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTTTCATGAGGTCCC	NA	False	NA	NA	False	NA	NA	NA	32094979	32095178	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_32095000_32095200
m54284U_201217_021426/76679260/ccs	chr2	-	177	1	Intergenic	novelGene_665	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATGA	NA	False	NA	NA	False	NA	NA	NA	29280135	29279958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_29280000_29280100
m54284U_201217_021426/7668025/ccs	chr1	-	169	1	Intergenic	novelGene_179	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAAAAAGTATT	7213	False	NA	NA	False	NA	NA	NA	72798870	72798701	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_72798700_72798900
m54284U_201217_021426/7668264/ccs	chr2	-	321	1	FSM	ENSMUSG00000081344.6	ENSMUST00000121320.2	171	1	-31	-119	-31	119	mono-exon	FALSE	NA	NA	NA	NA	NA	2367	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCAATAGACACCTAAGC	NA	False	NA	NA	False	NA	NA	NA	172351642	172351321	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr2_-_172351300_172351600
m54284U_201217_021426/7668574/ccs	chr12	-	3059	11	NIC	ENSMUSG00000042628.9	novel	4036	12	NA	NA	52	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_10	38.1544230725613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGCCATCGTATGGATC	NA	False	NA	NA	False	TTTAAA	-3	NA	83643944	83593622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83643770
m54284U_201217_021426/7669899/ccs	chr7	-	181	1	Intergenic	novelGene_4110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAATAATAAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	127513223	127513042	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127513000_127513200
m54284U_201217_021426/7670545/ccs	chr17	-	201	1	Intergenic	novelGene_8721	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATTTGAGGAGACAGC	NA	False	NA	NA	False	NA	NA	NA	74644130	74643929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_74643900_74644100
m54284U_201217_021426/76743220/ccs	chr11	-	192	1	Intergenic	novelGene_6232	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAGAGATGAAG	NA	False	NA	NA	False	NA	NA	NA	95630331	95630139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95630100_95630300
m54284U_201217_021426/76744946/ccs	chr9	+	181	1	Intergenic	novelGene_4993	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACGACCCTCTTGCAA	8684	False	NA	NA	False	NA	NA	NA	88965714	88965895	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_88965700_88965900
m54284U_201217_021426/76745381/ccs	chr19	-	156	1	Intergenic	novelGene_9154	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	9189637	9189481	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_9189500_9189600
m54284U_201217_021426/77004887/ccs	chr10	-	188	1	Intergenic	novelGene_5630	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAAGTTTAGCCCGT	NA	False	NA	NA	False	NA	NA	NA	128371650	128371462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128371500_128371600
m54284U_201217_021426/77072664/ccs	chr10	+	175	1	Intergenic	novelGene_5609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAGATCTGGTTCA	NA	False	NA	NA	False	NA	NA	NA	127817190	127817365	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_127817200_127817400
m54284U_201217_021426/77135967/ccs	chr8	-	166	1	Intergenic	novelGene_4275	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAG	NA	False	NA	NA	False	NA	NA	NA	41627357	41627191	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_41627200_41627400
m54284U_201217_021426/77138468/ccs	chr14	+	120	1	Intergenic	novelGene_7591	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTTAAAAAAGTGTTT	NA	False	NA	NA	False	NA	NA	NA	106163540	106163660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_106163500_106163700
m54284U_201217_021426/77203383/ccs	chr12	-	182	1	Intergenic	novelGene_6809	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTTTAAAGAGGGG	1150	False	NA	NA	False	NA	NA	NA	85176147	85175965	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_85176000_85176100
m54284U_201217_021426/77333050/ccs	chr15	-	121	1	Intergenic	novelGene_7731	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTCTAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	58728094	58727973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_58728000_58728100
m54284U_201217_021426/7733400/ccs	chr10	-	191	1	Intergenic	novelGene_5563	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCCCTCACAGCTGTA	NA	False	NA	NA	False	NA	NA	NA	118972920	118972729	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_118972700_118972900
m54284U_201217_021426/7735680/ccs	chr18	-	4071	1	FSM	ENSMUSG00000073647.5	ENSMUST00000097690.5	619	1	-312	-3140	-312	3140	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTAATTACTATCATCA	-1	True	NA	NA	False	NA	NA	NA	4199250	4195179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr18_-_4195200_4199200
m54284U_201217_021426/77400546/ccs	chr11	+	189	1	Intergenic	novelGene_5963	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAATCAGGAAAGC	NA	False	NA	NA	False	AATAAA	-7	NA	70413054	70413243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_70413100_70413200
m54284U_201217_021426/77464957/ccs	chr8	+	189	1	Intergenic	novelGene_4577	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCTATGTGATCTTG	9063	False	NA	NA	False	NA	NA	NA	123862855	123863044	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_123862900_123863000
m54284U_201217_021426/77529942/ccs	chr2	+	231	1	Intergenic	novelGene_1251	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTAACACTGCTATTTA	NA	False	NA	NA	False	NA	NA	NA	167297624	167297855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_167297600_167297900
m54284U_201217_021426/77530821/ccschrUn	chrUn_JH584304v1	-	159	1	Intergenic	novelGene_9750	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	10648	10489	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_10500_10600
m54284U_201217_021426/77661825/ccs	chr7	-	189	1	Intergenic	novelGene_3659	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATTAGAGGCTAGAGA	NA	False	NA	NA	False	NA	NA	NA	14096819	14096630	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_14096600_14096800
m54284U_201217_021426/77662226/ccs	chr9	+	189	1	Intergenic	novelGene_4843	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGATTGCAATAG	NA	False	NA	NA	False	AATAAA	-10	NA	62525727	62525916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_62525700_62525900
m54284U_201217_021426/77726409/ccs	chr12	-	175	1	Intergenic	novelGene_6846	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATCCCCACTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	100140193	100140018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_100140000_100140200
m54284U_201217_021426/77792297/ccs	chr5	-	107	1	Intergenic	novelGene_2982	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATAAAAATTTTTT	NA	False	NA	NA	False	NA	NA	NA	135723498	135723391	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_135723400_135723500
m54284U_201217_021426/77857244/ccs	chr2	+	133	1	Intergenic	novelGene_769	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTTTTAAATTTATATAT	3192	False	NA	NA	False	NA	NA	NA	37554579	37554712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_37554600_37554700
m54284U_201217_021426/77857799/ccs	chr4	-	193	1	Intergenic	novelGene_1903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTTTTTGTTTGTTTGT	NA	False	NA	NA	False	NA	NA	NA	73706497	73706304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_73706300_73706500
m54284U_201217_021426/77923326/ccs	chr5	-	179	1	Intergenic	novelGene_2786	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATGAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	114297616	114297437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_114297400_114297600
m54284U_201217_021426/77990196/ccs	chr15	+	190	1	Intergenic	novelGene_7870	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATACGAATGCCTCTGCC	5581	False	NA	NA	False	NA	NA	NA	83127818	83128008	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_83127800_83128000
m54284U_201217_021426/7799897/ccs	chr1	+	241	1	Intergenic	novelGene_447	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTATTTCATTTGTGTG	NA	False	NA	NA	False	NA	NA	NA	165093116	165093357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_165093100_165093400
m54284U_201217_021426/7800737/ccs	chr12	-	174	1	Intergenic	novelGene_6578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAATATCTAATTTA	NA	False	NA	NA	False	NA	NA	NA	17652886	17652712	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_17652700_17652900
m54284U_201217_021426/7801416/ccs	chr7	+	190	1	Intergenic	novelGene_4036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGTCTCGGCCAGTCAG	NA	False	NA	NA	False	NA	NA	NA	113855034	113855224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_113855000_113855200
m54284U_201217_021426/78120012/ccs	chr5	-	176	1	Intergenic	novelGene_2590	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAAAAAAAGTTAGGA	5106	False	NA	NA	False	NA	NA	NA	65747057	65746881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_65746900_65747100
m54284U_201217_021426/78184560/ccs	chr8	-	1578	1	Intergenic	novelGene_4516	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACAGAATTGTTTTCTGT	NA	False	NA	NA	False	AATAAA	-24	NA	112494884	112493306	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_112493300_112494900
m54284U_201217_021426/78185503/ccs	chr2	+	1581	1	Intergenic	novelGene_636	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTATGTGTTTGCCTGTG	3188	False	NA	NA	False	ATTAAA	-17	NA	25246431	25248012	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_25246400_25248000
m54284U_201217_021426/78250537/ccs	chr7	-	184	1	Intergenic	novelGene_4048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAACTTTAATATGTT	NA	False	NA	NA	False	NA	NA	NA	117280179	117279995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_117280000_117280200
m54284U_201217_021426/78316206/ccs	chr6	-	5197	1	Intergenic	novelGene_3497	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGTCTTGGCTACAT	1152	False	NA	NA	False	NA	NA	NA	124779306	124774109	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_124774100_124779300
m54284U_201217_021426/78318183/ccs	chr7	+	176	1	Intergenic	novelGene_4005	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGCGAACGGGGCC	NA	False	NA	NA	False	NA	NA	NA	109075732	109075908	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109075700_109075900
m54284U_201217_021426/78318225/ccs	chr10	-	172	1	Intergenic	novelGene_5200	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAGATAAGAAAAATA	4827	False	NA	0	True	NA	NA	NA	13319457	13319285	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_13319300_13319500
m54284U_201217_021426/78447592/ccs	chr8	-	179	1	Intergenic	novelGene_4596	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTAAAAAAATTGAAAAA	3851	False	NA	NA	False	NA	NA	NA	124718126	124717947	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_124717900_124718100
m54284U_201217_021426/78448097/ccs	chr10	-	191	1	Intergenic	novelGene_5440	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTCAGAGGACAACTTAA	NA	False	NA	NA	False	NA	NA	NA	79682140	79681949	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_79681900_79682100
m54284U_201217_021426/78514172/ccs	chr4	+	250	1	Intergenic	novelGene_2008	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAAAACAATGTTCCAAAC	NA	False	NA	NA	False	NA	NA	NA	115649678	115649928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_115649700_115649900
m54284U_201217_021426/78579429/ccs	chr3	-	1119	6	NNC	ENSMUSG00000000563.18	novel	1604	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1822.08072269041	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATAAGTTTCATACTCTG	NA	False	NA	-20	True	AATAAA	-16	NA	105866580	105850013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866443
m54284U_201217_021426/78579687/ccs	chr16	-	219	1	Intergenic	novelGene_8302	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGCTGGGCGTG	NA	False	NA	NA	False	NA	NA	NA	84566055	84565836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_84565800_84566100
m54284U_201217_021426/7865968/ccs	chr16	-	184	1	Intergenic	novelGene_8130	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTGTGCCAAAATTTCAG	NA	False	NA	NA	False	NA	NA	NA	18667519	18667335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_18667300_18667500
m54284U_201217_021426/7866711/ccs	chr1	+	201	1	Intergenic	novelGene_476	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAATACCATCCAACCGA	7857	False	NA	NA	False	NA	NA	NA	171133959	171134160	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171134000_171134200
m54284U_201217_021426/7867068/ccs	chrX	-	204	1	Intergenic	novelGene_9393	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAGGAAAGCGAAAGAA	NA	False	NA	NA	False	NA	NA	NA	12904999	12904795	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_12904800_12905000
m54284U_201217_021426/78711602/ccs	chr1	-	748	1	FSM	ENSMUSG00000084416.4	ENSMUST00000120360.2	654	1	-19	-75	-19	75	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATCACCTTTTACAATAA	NA	False	NA	NA	False	NA	NA	NA	65033782	65033034	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr1_-_65033000_65033800
m54284U_201217_021426/787422/ccs	chr4	+	257	1	Intergenic	novelGene_1966	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTCTTCAAGAGATAT	NA	False	NA	NA	False	AATAAA	-42	NA	103422193	103422450	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_103422200_103422400
m54284U_201217_021426/78777000/ccs	chr15	-	160	1	Intergenic	novelGene_7808	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAATAAATCTTT	NA	False	NA	-22	True	NA	NA	NA	79211016	79210856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_79210900_79211000
m54284U_201217_021426/78842245/ccs	chr3	-	2087	1	FSM	ENSMUSG00000028035.14	ENSMUST00000196291.2	4913	1	23	2803	0	-2803	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGAACGTTTGTACAGA	NA	False	NA	NA	False	NA	NA	NA	151915916	151913829	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr3_-_151913800_151915900
m54284U_201217_021426/788516/ccs	chr8	-	152	1	Intergenic	novelGene_4556	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATAAAGGGGGCAAGTT	NA	False	NA	NA	False	NA	NA	NA	121408997	121408845	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_121408800_121409000
m54284U_201217_021426/788737/ccs	chr10	-	178	1	Intergenic	novelGene_5240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAT	NA	False	NA	NA	False	NA	NA	NA	28244858	28244680	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_28244700_28244900
m54284U_201217_021426/78972512/ccs	chr5	-	182	1	Intergenic	novelGene_2707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAACTGGATAAGTGGA	NA	False	NA	NA	False	NA	NA	NA	103858661	103858479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_103858500_103858700
m54284U_201217_021426/79037722/ccs	chr3	-	183	1	Intergenic	novelGene_1632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTCTGACACATTTTC	NA	False	NA	NA	False	NA	NA	NA	108579724	108579541	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108579500_108579700
m54284U_201217_021426/79038735/ccs	chr17	-	178	1	Intergenic	novelGene_8469	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTCAAGTAAGATGAT	NA	False	NA	NA	False	NA	NA	NA	28952967	28952789	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_28952800_28953000
m54284U_201217_021426/79038756/ccs	chr19	+	3254	1	NIC	ENSMUSG00000010097.16	novel	2326	21	NA	NA	0	-3367	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	8615	False	NA	NA	False	NA	NA	NA	8734482	8737736	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_+_8734500_8737700
m54284U_201217_021426/79102318/ccs	chr6	+	180	1	Intergenic	novelGene_3377	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTCAGTTTTTTCTTA	4842	False	NA	NA	False	NA	NA	NA	88005120	88005300	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_88005100_88005300
m54284U_201217_021426/79104357/ccs	chr9	-	186	1	Intergenic	novelGene_4903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATC	NA	False	NA	NA	False	NA	NA	NA	66851438	66851252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_66851300_66851400
m54284U_201217_021426/79234833/ccs	chr17	-	176	1	Intergenic	novelGene_8546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGCTAAAGCTGAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	35208630	35208454	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35208500_35208600
m54284U_201217_021426/79299946/ccs	chr14	-	2971	1	NIC	ENSMUSG00000021870.18	novel	5476	24	NA	NA	0	-72161	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAGGAAG	NA	False	NA	NA	False	AGTAAA	-8	NA	26256086	26253115	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr14_-_26253100_26256100
m54284U_201217_021426/7931618/ccs	chr17	-	182	1	Intergenic	novelGene_8412	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTTCTTTTAAAAAGAAAA	6586	False	NA	NA	False	NA	NA	NA	24683344	24683162	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_24683200_24683300
m54284U_201217_021426/7931969/ccs	chr7	-	191	1	Antisense	novelGene_ENSMUSG00000108738.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAATGTGCTTGGTGCCTTT	NA	False	NA	NA	False	NA	NA	NA	115935429	115935238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr7_-_115935200_115935400
m54284U_201217_021426/79496248/ccs	chr1	-	182	1	Intergenic	novelGene_336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	266	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	135139619	135139437	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_135139400_135139600
m54284U_201217_021426/79497029/ccs	chr8	-	167	1	Intergenic	novelGene_4409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTCTTTCTTTAAAAA	9748	False	NA	NA	False	NA	NA	NA	94861389	94861222	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_94861200_94861400
m54284U_201217_021426/79497118/ccs	chr7	-	195	1	Intergenic	novelGene_3980	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTACACTGTAGCTGTCT	NA	False	NA	NA	False	NA	NA	NA	100481671	100481476	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_100481500_100481700
m54284U_201217_021426/79497934/ccs	chr10	-	178	1	Intergenic	novelGene_5323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGAACTTTGTA	5620	False	NA	NA	False	NA	NA	NA	60710679	60710501	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_60710500_60710700
m54284U_201217_021426/79562973/ccs	chr7	-	184	1	Intergenic	novelGene_3971	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAGGTCAGATCCAAGGA	4047	False	NA	NA	False	NA	NA	NA	99531999	99531815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_99531800_99532000
m54284U_201217_021426/79693229/ccs	chr10	+	174	1	Intergenic	novelGene_5482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	84719299	84719473	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_84719300_84719500
m54284U_201217_021426/79823084/ccs	chr14	+	216	2	Antisense	novelGene_ENSMUSG00000021973.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	235	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAAACCCAGGTTAAA	NA	False	NA	NA	False	NA	NA	NA	58132280	58157844	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_58132304_58157651
m54284U_201217_021426/79955189/ccs	chr6	-	188	1	Intergenic	novelGene_3285	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAACTATAAACAGGAAA	NA	False	NA	NA	False	NA	NA	NA	54603231	54603043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_54603000_54603200
m54284U_201217_021426/80022164/ccs	chr19	+	180	1	ISM	ENSMUSG00000097591.2	ENSMUST00000180609.2	1919	3	21298	1220	21298	-1220	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAAAAAATAAGGTTT	NA	False	NA	NA	False	NA	NA	NA	37172540	37172720	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr19_+_37172500_37172700
m54284U_201217_021426/80085154/ccs	chr3	-	155	1	Intergenic	novelGene_1682	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAATAAAATTT	NA	False	NA	NA	False	NA	NA	NA	129654288	129654133	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_129654100_129654300
m54284U_201217_021426/80282918/ccs	chr1	+	171	1	Intergenic	novelGene_265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAGAAAGTTGTTCT	NA	False	NA	NA	False	NA	NA	NA	106065804	106065975	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_106065800_106066000
m54284U_201217_021426/80283498/ccs	chr7	+	182	1	Intergenic	novelGene_3796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAATAGT	NA	False	NA	NA	False	NA	NA	NA	35972637	35972819	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_35972600_35972800
m54284U_201217_021426/80347615/ccs	chr8	-	178	1	Intergenic	novelGene_4323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGATGACAATC	NA	False	NA	NA	False	NA	NA	NA	70821376	70821198	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_70821200_70821400
m54284U_201217_021426/80479207/ccs	chr5	-	173	1	Intergenic	novelGene_2482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAACAAATTAGGGC	3694	False	NA	NA	False	NA	NA	NA	23919227	23919054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_23919100_23919200
m54284U_201217_021426/80544670/ccs	chr5	-	226	1	Intergenic	novelGene_2594	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGCCACTATGCCTAACG	8875	False	NA	NA	False	NA	NA	NA	65901657	65901431	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_65901400_65901700
m54284U_201217_021426/80609789/ccs	chr15	-	191	1	Intergenic	novelGene_7664	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAGAATGGGAGACCCA	NA	False	NA	NA	False	NA	NA	NA	28101544	28101353	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_28101400_28101500
m54284U_201217_021426/8061602/ccs	chr5	+	188	1	Intergenic	novelGene_2523	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAAAATCATGCT	NA	False	NA	NA	False	NA	NA	NA	32532953	32533141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_32533000_32533100
m54284U_201217_021426/8062889/ccs	chr5	+	188	1	Intergenic	novelGene_2964	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATGACAGGTGTGTGT	NA	False	NA	NA	False	NA	NA	NA	134610597	134610785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_134610600_134610800
m54284U_201217_021426/80674943/ccs	chr4	+	184	1	Intergenic	novelGene_1764	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTAAATGATGGGTTGT	NA	False	NA	NA	False	NA	NA	NA	21722323	21722507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_21722300_21722500
m54284U_201217_021426/80675672/ccs	chr1	-	176	1	Intergenic	novelGene_296	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATTAAAAGGCAC	9141	False	NA	NA	False	NA	NA	NA	131130176	131130000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_131130000_131130200
m54284U_201217_021426/80740446/ccs	chr4	+	182	1	Intergenic	novelGene_2192	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATATCTAAGGACC	NA	False	NA	NA	False	NA	NA	NA	132244375	132244557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_132244400_132244600
m54284U_201217_021426/80808190/ccs	chr12	+	168	1	Intergenic	novelGene_6634	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTGGTTTTTC	NA	False	NA	NA	False	NA	NA	NA	52633472	52633640	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_52633500_52633600
m54284U_201217_021426/80808636/ccs	chr9	+	193	1	Intergenic	novelGene_4781	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAAGTGTCTTAGGTTTT	NA	False	NA	NA	False	NA	NA	NA	55024346	55024539	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_55024300_55024500
m54284U_201217_021426/80871521/ccs	chr17	-	189	1	Intergenic	novelGene_8683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCACAACCATCTGAAGA	8839	False	NA	NA	False	NA	NA	NA	66410859	66410670	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_66410700_66410900
m54284U_201217_021426/80873128/ccs	chr16	-	2901	1	Intergenic	novelGene_8274	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGTGTGTGTTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	48422120	48419219	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_48419200_48422100
m54284U_201217_021426/80938330/ccs	chr19	+	2570	1	Genic_Genomic	ENSMUSG00000047423.11	novel	NA	NA	NA	NA	0	413	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	260	False	NA	NA	False	NA	NA	NA	5475184	5477754	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr19_+_5475200_5477800
m54284U_201217_021426/81068653/ccs	chr13	-	175	1	Intergenic	novelGene_7248	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTTAAAAAAAAAGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	96184746	96184571	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_96184600_96184700
m54284U_201217_021426/81136478/ccs	chr11	-	2797	1	NIC	ENSMUSG00000025144.18	novel	606	5	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTTCTCTTTGCCA	NA	False	NA	-2	True	AATAAA	-19	NA	120604564	120601767	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_120601800_120604600
m54284U_201217_021426/81201336/ccs	chr2	-	1002	1	Antisense	novelGene_ENSMUSG00000042548.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACAAAAAAAAAAAAAAAAG	422	False	NA	NA	False	NA	NA	NA	153241294	153240292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr2_-_153240300_153241300
m54284U_201217_021426/81265306/ccs	chr2	+	185	1	Intergenic	novelGene_921	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAACTCAAAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	90761328	90761513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_90761300_90761500
m54284U_201217_021426/81267045/ccs	chr6	-	193	1	Intergenic	novelGene_3404	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCATGGTGGCAGCACTC	9524	False	NA	NA	False	NA	NA	NA	97344655	97344462	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_97344500_97344700
m54284U_201217_021426/8128300/ccs	chr2	-	201	1	Intergenic	novelGene_571	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGATTCGTAAGGTAA	NA	False	NA	NA	False	NA	NA	NA	4890734	4890533	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_4890500_4890700
m54284U_201217_021426/81463006/ccs	chr16	-	169	1	Intergenic	novelGene_8071	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAGGCTGCCTTTCTA	NA	False	NA	NA	False	NA	NA	NA	13554336	13554167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_13554200_13554300
m54284U_201217_021426/81594994/ccs	chr4	-	4035	16	NIC	ENSMUSG00000037622.15	novel	4191	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	161.332865013094	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCATTTGTTGGGGC	8387	False	NA	1	True	ATTAAA	-22	NA	133080792	133019769	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133080096_133080261_133080600
m54284U_201217_021426/81658251/ccs	chr13	-	172	1	Intergenic	novelGene_7284	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAATGGGGTACA	NA	False	NA	NA	False	NA	NA	NA	104333376	104333204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_104333200_104333400
m54284U_201217_021426/81658449/ccs	chr5	-	169	1	Intergenic	novelGene_2800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAGAAAGTTGTAG	1872	False	NA	NA	False	NA	NA	NA	115311894	115311725	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_115311700_115311900
m54284U_201217_021426/81660533/ccs	chr12	+	215	1	Intergenic	novelGene_6548	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTTTATACCACAGTAA	204	False	NA	NA	False	AGTAAA	-17	NA	4630116	4630331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_4630100_4630300
m54284U_201217_021426/81789571/ccs	chr5	-	172	1	Intergenic	novelGene_3070	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTTTTTAAATTTGAA	NA	False	NA	NA	False	NA	NA	NA	146804088	146803916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_146803900_146804100
m54284U_201217_021426/81791723/ccs	chr14	-	170	1	Intergenic	novelGene_7499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTTAAAAAGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	60839412	60839242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_60839200_60839400
m54284U_201217_021426/81854679/ccs	chr13	-	205	1	Intergenic	novelGene_7048	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACAAACAGATCCACTC	4714	False	NA	NA	False	AAAAAG	-8	NA	44978282	44978077	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_44978100_44978300
m54284U_201217_021426/8192144/ccs	chr1	+	175	1	Intergenic	novelGene_442	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTCTTTAAAGAATG	NA	False	NA	NA	False	NA	NA	NA	164173863	164174038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_164173900_164174000
m54284U_201217_021426/81921449/ccs	chr1	-	187	1	Intergenic	novelGene_409	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATTAAAAAAAAAAGATG	6850	False	NA	NA	False	NA	NA	NA	156424065	156423878	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_156423900_156424100
m54284U_201217_021426/8192225/ccs	chr3	+	182	1	Intergenic	novelGene_1510	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTTTTTCATGTGCT	8713	False	NA	NA	False	NA	NA	NA	88993610	88993792	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88993600_88993800
m54284U_201217_021426/81922629/ccs	chr15	-	176	1	Intergenic	novelGene_7942	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTTTAAAAAAAATCCAAT	8153	False	NA	NA	False	NA	NA	NA	98596517	98596341	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_98596300_98596500
m54284U_201217_021426/8192282/ccs	chr1	-	224	1	Intergenic	novelGene_401	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGGCAGGGCAGGGCAG	NA	False	NA	NA	False	AAGAAA	-25	NA	156015666	156015442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_156015400_156015700
m54284U_201217_021426/81987266/ccs	chr11	+	160	1	Intergenic	novelGene_5800	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGCCAAAAAACAAGC	6709	False	NA	NA	False	NA	NA	NA	50154625	50154785	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_50154600_50154800
m54284U_201217_021426/82053752/ccs	chr19	-	2536	1	NIC	ENSMUSG00000024790.9	novel	1442	2	NA	NA	115	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACAGGAACTTTTAGAC	NA	False	NA	-9	True	AATAAA	-25	NA	6168565	6166029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr19_-_6166000_6168600
m54284U_201217_021426/82053949/ccs	chr9	-	178	1	Intergenic	novelGene_4708	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTTGCACAAACATAAC	NA	False	NA	NA	False	NA	NA	NA	36800277	36800099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_36800100_36800300
m54284U_201217_021426/82117610/ccs	chr7	-	190	1	Intergenic	novelGene_3946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAAGCAGTGGCAAG	NA	False	NA	NA	False	NA	NA	NA	89622554	89622364	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_89622400_89622600
m54284U_201217_021426/82182264/ccs	chr19	-	226	1	Intergenic	novelGene_9091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGCATCTACTGTATTTA	2744	False	NA	NA	False	NA	NA	NA	4903871	4903645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4903600_4903900
m54284U_201217_021426/82183109/ccs	chr6	+	193	1	Intergenic	novelGene_3186	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAAGAAAGAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	37821720	37821913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_37821700_37821900
m54284U_201217_021426/82183362/ccs	chr1	-	157	1	Intergenic	novelGene_378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	153025916	153025759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_153025800_153025900
m54284U_201217_021426/82248144/ccs	chr1	+	193	1	Intergenic	novelGene_238	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGAGACAGCCACATGT	NA	False	NA	NA	False	NA	NA	NA	87566929	87567122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_87566900_87567100
m54284U_201217_021426/82248278/ccs	chr6	-	2880	8	NIC	ENSMUSG00000053907.11	novel	2804	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	591	junction_1	90.4557621047945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCTATTACTTGT	NA	False	NA	-11	True	AATAAA	-17	NA	72416541	72409781	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413513_72413977_72414101_72414353_72414432_72416328
m54284U_201217_021426/82313970/ccs	chr11	-	193	1	Intergenic	novelGene_5694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCTCTGATAAGCTAT	5551	False	NA	NA	False	NA	NA	NA	6438860	6438667	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_6438700_6438900
m54284U_201217_021426/82314313/ccs	chr18	-	339	1	Intergenic	novelGene_8855	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAAATAGCTGGCGGTG	NA	False	NA	NA	False	NA	NA	NA	31885508	31885169	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_31885200_31885500
m54284U_201217_021426/82381623/ccs	chr15	-	913	1	Antisense	novelGene_ENSMUSG00000042622.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAGGCTTCTATCTCA	NA	False	NA	-1	True	AGTAAA	-20	NA	79241995	79241082	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr15_-_79241100_79242000
m54284U_201217_021426/82510890/ccs	chr10	+	8447	29	NNC	ENSMUSG00000040054.18	novel	3721	11	NA	NA	486	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_21	125.676551763904	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGATTGCATGTTTCTC	NA	False	NA	0	True	AATAAA	-20	NA	127932734	127965172	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949328_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959894_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961889_127962111_127962194_127962339_127962456
m54284U_201217_021426/82512300/ccs	chr5	+	178	1	Intergenic	novelGene_2567	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATTCTCCAAATCT	NA	False	NA	NA	False	NA	NA	NA	38594963	38595141	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_38595000_38595100
m54284U_201217_021426/8258249/ccs	chr12	-	198	1	Intergenic	novelGene_6693	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAACTCAGAGCCTTG	NA	False	NA	NA	False	NA	NA	NA	70834252	70834054	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_70834100_70834300
m54284U_201217_021426/8259578/ccs	chr2	-	179	1	Intergenic	novelGene_1170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACCTGTAATTTTGCTA	NA	False	NA	NA	False	NA	NA	NA	155906785	155906606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_155906600_155906800
m54284U_201217_021426/8259689/ccs	chr1	-	190	1	Intergenic	novelGene_462	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTTCAGCTAAAAGGT	NA	False	NA	NA	False	NA	NA	NA	167477599	167477409	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_167477400_167477600
m54284U_201217_021426/8260389/ccs	chr9	+	176	1	Intergenic	novelGene_4877	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAATGAAATTGAGA	NA	False	NA	NA	False	NA	NA	NA	64999679	64999855	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_64999700_64999900
m54284U_201217_021426/82706854/ccs	chr17	+	175	1	Intergenic	novelGene_8779	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAGAAAGAAAGTA	NA	False	NA	NA	False	NA	NA	NA	88398084	88398259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_88398100_88398300
m54284U_201217_021426/82708412/ccs	chr14	-	172	1	Intergenic	novelGene_7425	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAATAAATCTTTTAAA	NA	False	NA	NA	False	NA	NA	NA	48871437	48871265	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_48871300_48871400
m54284U_201217_021426/82773254/ccs	chr4	-	183	1	Intergenic	novelGene_1906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTACAGATATAACTAAT	NA	False	NA	NA	False	NA	NA	NA	74215096	74214913	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_74214900_74215100
m54284U_201217_021426/82838286/ccs	chr5	-	4159	1	NIC	ENSMUSG00000028959.15	novel	1610	8	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAAGTCTTGTTTCTGGG	NA	False	NA	-4	True	NA	NA	NA	24650195	24646036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_-_24646000_24650200
m54284U_201217_021426/82838557/ccs	chr5	+	178	1	Intergenic	novelGene_2654	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCATATATATTCTTTAA	NA	False	NA	NA	False	NA	NA	NA	90351444	90351622	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_90351400_90351600
m54284U_201217_021426/82969878/ccs	chr2	-	181	1	Intergenic	novelGene_979	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGGAGATTGAGACATTA	NA	False	NA	NA	False	NA	NA	NA	109203494	109203313	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_109203300_109203500
m54284U_201217_021426/82969919/ccs	chr9	-	206	1	Intergenic	novelGene_4796	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTCACTAGTAAGGC	NA	False	NA	NA	False	NA	NA	NA	56982234	56982028	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_56982000_56982200
m54284U_201217_021426/82970077/ccs	chr19	-	192	1	Intergenic	novelGene_9292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAACAGAAGGGGCAGG	NA	False	NA	NA	False	NA	NA	NA	45297968	45297776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_45297800_45298000
m54284U_201217_021426/82970110/ccs	chr11	+	239	1	Intergenic	novelGene_5949	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCCAGCTGCCTTCCTA	NA	False	NA	NA	False	AAAAAG	-33	NA	69614380	69614619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_69614400_69614600
m54284U_201217_021426/83099660/ccs	chr3	-	186	1	Intergenic	novelGene_1499	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGAGGAGGACGGCAG	NA	False	NA	NA	False	NA	NA	NA	88700388	88700202	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_88700200_88700400
m54284U_201217_021426/83167290/ccs	chr12	+	2402	1	Antisense	novelGene_ENSMUSG00000066440.6_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6343	False	NA	NA	False	NA	NA	NA	79333587	79335989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr12_+_79333600_79336000
m54284U_201217_021426/83231769/ccs	chrX	+	159	1	Intergenic	novelGene_9553	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	100134916	100135075	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_100134900_100135100
m54284U_201217_021426/83297713/ccs	chr13	-	182	1	Intergenic	novelGene_6981	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATATATAAATAAATAT	NA	False	NA	NA	False	NA	NA	NA	20149445	20149263	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_20149300_20149400
m54284U_201217_021426/83493989/ccs	chr6	+	207	1	Intergenic	novelGene_3352	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTTATCTGCATAGTA	NA	False	NA	NA	False	NA	NA	NA	83913544	83913751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_83913500_83913800
m54284U_201217_021426/83559218/ccs	chr2	-	1071	1	Intergenic	novelGene_817	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTGTTTTTGTTGTT	NA	False	NA	NA	False	NA	NA	NA	65586272	65585201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_65585200_65586300
m54284U_201217_021426/83624022/ccs	chr9	-	195	1	Intergenic	novelGene_5060	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACCCTGTACCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	106046396	106046201	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_106046200_106046400
m54284U_201217_021426/83756047/ccs	chr11	-	192	1	Intergenic	novelGene_5903	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATTTTAAATCACAAGT	NA	False	NA	NA	False	NA	NA	NA	61989587	61989395	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_61989400_61989600
m54284U_201217_021426/83822636/ccs	chr6	+	179	1	Intergenic	novelGene_3323	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGAAGGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	72066300	72066479	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_72066300_72066500
m54284U_201217_021426/83822712/ccs	chr7	-	3777	23	NIC	ENSMUSG00000032637.16	novel	4023	22	NA	NA	0	0	intron_retention	FALSE	canonical	2	37	junction_1	255.393752876347	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAACCTGCCTATGGGT	6928	False	NA	-7	True	NA	NA	NA	126101586	126090886	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_-_126091388_126091615_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126101467
m54284U_201217_021426/83888787/ccs	chr4	-	196	1	Intergenic	novelGene_2124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTTTTTTAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	126869136	126868940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_126868900_126869100
m54284U_201217_021426/83954081/ccs	chr4	-	189	1	Intergenic	novelGene_1775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATGCTTTCATTGTGTCC	NA	False	NA	NA	False	NA	NA	NA	26611225	26611036	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_26611000_26611200
m54284U_201217_021426/84083648/ccs	chr2	+	176	1	Intergenic	novelGene_908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAATAAAAAGAGAC	NA	False	NA	NA	False	NA	NA	NA	87456543	87456719	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_87456500_87456700
m54284U_201217_021426/84149860/ccs	chr4	-	6136	28	NIC	ENSMUSG00000003810.14	novel	5705	29	NA	NA	0	0	intron_retention	FALSE	canonical	3	226	junction_2	30.9867000984357	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGGCCTGTGTTTGCTT	8487	False	NA	-3	True	AATACA	-15	NA	116321380	116163959	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
m54284U_201217_021426/84150030/ccs	chr4	-	3668	1	Genic_Genomic	ENSMUSG00000086096.2	novel	NA	NA	NA	NA	-2294	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATACCATTAATTACGGT	NA	False	NA	-13	True	AATAAA	-16	NA	99545514	99541846	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr4_-_99541800_99545500
m54284U_201217_021426/84150299/ccs	chr8	-	152	1	Intergenic	novelGene_4265	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTATCTGTAAGTACGCT	NA	False	NA	-2	True	AATAAA	-19	NA	34456443	34456291	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_34456300_34456400
m54284U_201217_021426/84213784/ccs	chr12	+	195	1	Intergenic	novelGene_6939	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAATAAACTCCTCAT	NA	False	NA	NA	False	NA	NA	NA	115936819	115937014	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_115936800_115937000
m54284U_201217_021426/84214432/ccs	chr6	+	191	1	Intergenic	novelGene_3597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACTAGTCCCTAGAGGAG	NA	False	NA	NA	False	NA	NA	NA	149094735	149094926	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_149094700_149094900
m54284U_201217_021426/84215894/ccs	chr16	+	191	1	Intergenic	novelGene_8124	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCATTAACCAAAGTACAA	NA	False	NA	NA	False	NA	NA	NA	18329876	18330067	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_18329900_18330100
m54284U_201217_021426/84215924/ccs	chr11	-	205	1	Intergenic	novelGene_6343	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATAACTTGCTTGTTTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	101567260	101567055	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_101567100_101567300
m54284U_201217_021426/84281293/ccs	chr2	-	184	1	Intergenic	novelGene_890	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCACACTGTTCTGCCA	NA	False	NA	NA	False	NA	NA	NA	83524404	83524220	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_83524200_83524400
m54284U_201217_021426/84411116/ccs	chr19	+	178	1	Intergenic	novelGene_9324	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATCATTGTTCTGCA	367	False	NA	NA	False	NA	NA	NA	47017194	47017372	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_47017200_47017400
m54284U_201217_021426/84411436/ccs	chr10	-	8042	1	Antisense	novelGene_ENSMUSG00000047648.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTCAGGCCGGGCGGT	NA	False	NA	NA	False	AAGAAA	-45	NA	11169994	11161952	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr10_-_11162000_11170000
m54284U_201217_021426/84477031/ccs	chr9	-	189	1	Intergenic	novelGene_4923	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTACAAGACTGGTTGT	NA	False	NA	NA	False	NA	NA	NA	72121742	72121553	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_72121600_72121700
m54284U_201217_021426/84477534/ccs	chr18	+	185	1	Intergenic	novelGene_9024	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAACGAGGAAGTGAGTA	NA	False	NA	NA	False	NA	NA	NA	76057714	76057899	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_76057700_76057900
m54284U_201217_021426/84478043/ccs	chr10	-	185	1	Intergenic	novelGene_5457	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTACGAAAACAGAACCAAAA	9861	False	NA	NA	False	NA	NA	NA	80896571	80896386	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_80896400_80896600
m54284U_201217_021426/84544163/ccs	chr17	-	215	1	Intergenic	novelGene_8653	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	NA	False	NA	NA	False	NA	NA	NA	56402530	56402315	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_56402300_56402500
m54284U_201217_021426/84544342/ccs	chr1	+	356	1	Intergenic	novelGene_183	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTTAAAAAAGAAAAGTAG	1129	False	NA	NA	False	NA	NA	NA	74282355	74282711	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_74282400_74282700
m54284U_201217_021426/84673824/ccs	chr12	+	1634	1	NIC	ENSMUSG00000044147.9	novel	1534	2	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAACTGCCGTTTGTCTTT	NA	False	NA	30	True	AGTAAA	-19	NA	69418923	69420557	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr12_+_69418900_69420600
m54284U_201217_021426/84674404/ccs	chr4	-	356	1	Intergenic	novelGene_2174	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACTGTCTTGAGAGTTAA	NA	False	NA	NA	False	NA	NA	NA	130369676	130369320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_130369300_130369700
m54284U_201217_021426/84674476/ccs	chr7	+	195	1	Intergenic	novelGene_3787	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATTTATTTCACCTAT	NA	False	NA	NA	False	NA	NA	NA	34055960	34056155	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_34056000_34056200
m54284U_201217_021426/84674477/ccs	chr9	-	226	1	Intergenic	novelGene_5114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGCTGGAGGTGCAGTTC	4519	False	NA	NA	False	NA	NA	NA	110528432	110528206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_110528200_110528400
m54284U_201217_021426/84739192/ccs	chr12	+	3835	1	Genic_Genomic	ENSMUSG00000098202.3	novel	NA	NA	NA	NA	3189	22	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCAACAAAACAAAACCAACA	NA	False	NA	NA	False	NA	NA	NA	109665208	109669043	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr12_+_109665200_109669000
m54284U_201217_021426/84804644/ccs	chr5	-	165	1	Intergenic	novelGene_2844	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATCTTTAAAAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	120988504	120988339	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_120988300_120988500
m54284U_201217_021426/85000296/ccs	chr19	-	176	1	Intergenic	novelGene_9338	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGAAACC	NA	False	NA	NA	False	NA	NA	NA	53510315	53510139	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_53510100_53510300
m54284U_201217_021426/85002146/ccs	chr9	+	179	1	Intergenic	novelGene_5036	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACCAGTTTATTGAAG	2962	False	NA	NA	False	NA	NA	NA	100652189	100652368	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_100652200_100652400
m54284U_201217_021426/85068040/ccs	chr14	-	3239	15	NNC	ENSMUSG00000048922.19	novel	3841	15	NA	NA	0	-361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	148.343454901943	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAAATACATTAATTTCT	NA	False	NA	-13	True	AATAAA	-27	NA	67952824	67914164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr14_-_67915472_67917610_67917780_67931074_67931201_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941490_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
m54284U_201217_021426/85198447/ccs	chr11	-	169	1	Intergenic	novelGene_5740	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAACAAAAACC	NA	False	NA	NA	False	NA	NA	NA	23282307	23282138	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_23282100_23282300
m54284U_201217_021426/8521793/ccs	chr5	-	195	1	Intergenic	novelGene_2622	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAATTAATGAGTAGTTA	NA	False	NA	NA	False	NA	NA	NA	75268515	75268320	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_75268300_75268500
m54284U_201217_021426/852567/ccs	chr11	-	266	1	Intergenic	novelGene_6489	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTGCTTTGTGTCAACA	NA	False	NA	NA	False	NA	NA	NA	117475813	117475547	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_117475500_117475800
m54284U_201217_021426/85264212/ccs	chr10	+	175	1	Intergenic	novelGene_5336	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAATTTTTTTCCCAT	6518	False	NA	NA	False	NA	NA	NA	61358525	61358700	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_61358500_61358700
m54284U_201217_021426/85328313/ccs	chr12	-	181	1	Intergenic	novelGene_6549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAATCTTGAAATA	NA	False	NA	NA	False	NA	NA	NA	4632032	4631851	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_4631900_4632000
m54284U_201217_021426/85330192/ccs	chr5	-	176	1	Intergenic	novelGene_2602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACTTATTAAGAAAA	1075	False	NA	NA	False	NA	NA	NA	66593973	66593797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_66593800_66594000
m54284U_201217_021426/85393891/ccs	chr4	-	204	1	Intergenic	novelGene_2191	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAATCTCTCAGCATTTA	9532	False	NA	NA	False	NA	NA	NA	132177060	132176856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_132176900_132177100
m54284U_201217_021426/85394337/ccs	chr16	+	235	1	Intergenic	novelGene_8109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTAAGTCCAATTAGTG	NA	False	NA	NA	False	NA	NA	NA	17549031	17549266	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17549000_17549300
m54284U_201217_021426/854408/ccs	chr2	-	190	1	Intergenic	novelGene_1062	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCACAGAAGAATACTC	NA	False	NA	NA	False	NA	NA	NA	128854895	128854705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_128854700_128854900
m54284U_201217_021426/85460667/ccs	chr12	-	175	1	Intergenic	novelGene_6932	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATCTTAAAAAAAAATCAAA	9993	False	NA	NA	False	NA	NA	NA	112843149	112842974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_112843000_112843100
m54284U_201217_021426/85460835/ccs	chr5	-	186	1	Intergenic	novelGene_2758	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAATGTAATTAAAAA	NA	False	NA	NA	False	NA	NA	NA	110064624	110064438	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_110064400_110064600
m54284U_201217_021426/85524963/ccs	chr10	+	312	1	Intergenic	novelGene_5182	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAAACCAGGCTGGAGA	NA	False	NA	NA	False	TATAAA	-2	NA	7018867	7019179	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_7018900_7019200
m54284U_201217_021426/85525765/ccs	chr2	-	176	1	Intergenic	novelGene_1072	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAACAGACCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	130789362	130789186	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_130789200_130789400
m54284U_201217_021426/85526387/ccs	chr6	-	191	1	Intergenic	novelGene_3549	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGGTGCTAGAAATGTTT	NA	False	NA	NA	False	NA	NA	NA	134726029	134725838	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_134725800_134726000
m54284U_201217_021426/85590325/ccs	chr17	+	166	1	Intergenic	novelGene_8543	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTTCTTTATATTCTG	5430	False	NA	6	True	NA	NA	NA	35116204	35116370	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_35116200_35116400
m54284U_201217_021426/85591531/ccs	chr5	+	4450	1	Intergenic	novelGene_2956	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGCTTGAGGCAC	NA	False	NA	NA	False	NA	NA	NA	132471267	132475717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_132471300_132475700
m54284U_201217_021426/85658063/ccs	chr5	+	290	1	Intergenic	novelGene_2955	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	1648	False	NA	NA	False	NA	NA	NA	131588167	131588457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_131588200_131588500
m54284U_201217_021426/85658233/ccs	chr17	+	171	1	Intergenic	novelGene_8360	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTAGGCCCCCTGTTC	3077	False	NA	NA	False	NA	NA	NA	8509421	8509592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_8509400_8509600
m54284U_201217_021426/85723427/ccs	chr14	+	179	1	Intergenic	novelGene_7453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATTCACACAGGCA	NA	False	NA	NA	False	NA	NA	NA	54507447	54507626	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_54507400_54507600
m54284U_201217_021426/85786661/ccs	chrX	-	203	1	Intergenic	novelGene_9615	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGAAAATCTTAAATCC	NA	False	NA	NA	False	NA	NA	NA	113886783	113886580	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_113886600_113886800
m54284U_201217_021426/85787533/ccs	chr8	+	1133	1	FSM	ENSMUSG00000071041.5	ENSMUST00000120826.2	1545	1	484	-72	484	72	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTAGTGCTAATGGA	NA	False	NA	NA	False	AATAAA	-36	NA	100757673	100758806	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr8_+_100757700_100758800
m54284U_201217_021426/85788956/ccs	chr2	-	191	1	Intergenic	novelGene_597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGATGGAATCAGCACA	NA	False	NA	NA	False	NA	NA	NA	14270483	14270292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_14270300_14270500
m54284U_201217_021426/85853515/ccs	chr4	-	197	1	ISM	ENSMUSG00000055296.15	ENSMUST00000068792.13	15981	18	71564	8754	47585	4199	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGCAACTGATCTCTA	NA	False	NA	NA	False	NA	NA	NA	56875873	56875676	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_-_56875700_56875900
m54284U_201217_021426/85918997/ccs	chr16	-	3619	1	NIC	ENSMUSG00000043140.11	novel	3391	2	NA	NA	217	-648	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGTGGGTTAGTTCTT	NA	False	NA	NA	False	AATACA	-16	NA	8455359	8451740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr16_-_8451700_8455400
m54284U_201217_021426/85985854/ccs	chr16	+	264	1	Intergenic	novelGene_8227	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAATAGTAACAAAGAGAA	NA	False	NA	NA	False	AAAAAG	-17	NA	33197249	33197513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_33197200_33197500
m54284U_201217_021426/86049091/ccs	chr19	-	161	1	Intergenic	novelGene_9236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	37239568	37239407	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_37239400_37239600
m54284U_201217_021426/86182272/ccs	chr15	-	156	1	Intergenic	novelGene_7841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGAAACACTTGGCTC	4732	False	NA	NA	False	NA	NA	NA	81370152	81369996	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_81370000_81370200
m54284U_201217_021426/86245557/ccs	chrX	-	5178	1	Intergenic	novelGene_9617	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGGAAAGCTTCATGGC	NA	False	NA	NA	False	NA	NA	NA	116231724	116226546	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_116226500_116231700
m54284U_201217_021426/86247676/ccs	chr7	+	186	1	Intergenic	novelGene_3734	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTATGATTAATTATG	NA	False	NA	NA	False	NA	NA	NA	28027112	28027298	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_28027100_28027300
m54284U_201217_021426/86312148/ccs	chr11	-	176	1	Intergenic	novelGene_6483	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTCACAGAGCATGGG	NA	False	NA	NA	False	NA	NA	NA	116783182	116783006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_116783000_116783200
m54284U_201217_021426/86313557/ccs	chr4	-	186	1	Intergenic	novelGene_2170	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGCAAAGGGGACAGAACC	NA	False	NA	NA	False	NA	NA	NA	130317833	130317647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_130317600_130317800
m54284U_201217_021426/86509477/ccs	chr7	+	170	1	Intergenic	novelGene_4109	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGTTTTTTTTTCAA	NA	False	NA	NA	False	NA	NA	NA	127459036	127459206	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_127459000_127459200
m54284U_201217_021426/8651961/ccs	chr9	-	2163	1	Genic_Genomic	ENSMUSG00000032126.17	novel	NA	NA	NA	NA	-451	75	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGCCTTCAATTCCTA	7210	False	NA	84	True	NA	NA	NA	44249723	44247560	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_-_44247600_44249700
m54284U_201217_021426/8652592/ccs	chr12	-	215	1	Intergenic	novelGene_6657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCTAGTTGAAGCTGA	NA	False	NA	NA	False	NA	NA	NA	56673913	56673698	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_56673700_56673900
m54284U_201217_021426/8653101/ccs	chr17	-	177	1	Intergenic	novelGene_8438	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTAAAAAAAAAGGAGAG	7349	False	NA	NA	False	NA	NA	NA	26965690	26965513	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_26965500_26965700
m54284U_201217_021426/8653510/ccs	chr9	-	192	1	Intergenic	novelGene_4753	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGAACGAGGCAGAAA	4633	False	NA	NA	False	NA	NA	NA	48831707	48831515	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_48831500_48831700
m54284U_201217_021426/86639733/ccs	chr9	-	163	1	Intergenic	novelGene_4683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAACAAAAAACA	NA	False	NA	NA	False	NA	NA	NA	27050647	27050484	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_27050500_27050600
m54284U_201217_021426/86639992/ccs	chr9	-	148	1	Intergenic	novelGene_4675	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCTCATTCTTCTGA	NA	False	NA	NA	False	NA	NA	NA	22307925	22307777	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_22307800_22307900
m54284U_201217_021426/86640993/ccs	chr16	-	168	1	Intergenic	novelGene_8335	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAATTTAGACTTATTC	925	False	NA	NA	False	NA	NA	NA	96016877	96016709	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_96016700_96016900
m54284U_201217_021426/86706702/ccs	chr2	+	171	1	Intergenic	novelGene_714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATAAAAACAAGGGC	NA	False	NA	NA	False	NA	NA	NA	32034186	32034357	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_32034200_32034400
m54284U_201217_021426/86706939/ccs	chr1	+	178	1	Intergenic	novelGene_140	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAATGTCAAACAAG	NA	False	NA	NA	False	NA	NA	NA	59640221	59640399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_59640200_59640400
m54284U_201217_021426/86901932/ccs	chr18	-	193	1	Intergenic	novelGene_8954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTTATTGCCTGATTT	NA	False	NA	NA	False	NA	NA	NA	49847073	49846880	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_49846900_49847100
m54284U_201217_021426/86902732/ccs	chr15	+	179	1	Intergenic	novelGene_7749	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAGAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	73144988	73145167	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_+_73145000_73145200
m54284U_201217_021426/86967509/ccs	chr12	-	174	1	Intergenic	novelGene_6906	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAAAGAATT	NA	False	NA	NA	False	NA	NA	NA	111043853	111043679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_111043700_111043900
m54284U_201217_021426/87033823/ccs	chr9	+	142	1	Intergenic	novelGene_5049	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAATGCATGCTTGAGTG	5751	False	NA	NA	False	NA	NA	NA	102905957	102906099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_102906000_102906100
m54284U_201217_021426/87099352/ccs	chr8	-	191	1	Intergenic	novelGene_4562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAGAAAAGCGGAGC	NA	False	NA	NA	False	NA	NA	NA	122393212	122393021	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_122393000_122393200
m54284U_201217_021426/87163008/ccs	chr3	-	184	1	Intergenic	novelGene_1542	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTGGTT	NA	False	NA	NA	False	NA	NA	NA	90350689	90350505	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_90350500_90350700
m54284U_201217_021426/87165384/ccs	chr7	+	177	1	Intergenic	novelGene_4142	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAGAAGAAGAAAATT	NA	False	NA	NA	False	NA	NA	NA	138394411	138394588	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_138394400_138394600
m54284U_201217_021426/8718057/ccs	chr17	-	200	1	Intergenic	novelGene_8595	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACGACAAAGGCAGGCCC	NA	False	NA	NA	False	NA	NA	NA	41057691	41057491	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_41057500_41057700
m54284U_201217_021426/87228491/ccs	chr5	-	191	1	Intergenic	novelGene_2484	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGCTGGTGAGATGGCTC	4602	False	NA	NA	False	NA	NA	NA	24026076	24025885	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_24025900_24026100
m54284U_201217_021426/87229171/ccs	chr10	+	154	1	Intergenic	novelGene_5580	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAATAAACTTTAA	NA	False	NA	NA	False	NA	NA	NA	120804071	120804225	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_120804100_120804200
m54284U_201217_021426/87360238/ccs	chr7	+	193	1	Intergenic	novelGene_3851	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCATCCTCTGTACGGGCT	NA	False	NA	NA	False	NA	NA	NA	46477956	46478149	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_46478000_46478100
m54284U_201217_021426/87361027/ccs	chrX	-	179	1	Intergenic	novelGene_9465	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATCCAGGAAACC	1757	False	NA	NA	False	NA	NA	NA	52427086	52426907	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_52426900_52427100
m54284U_201217_021426/87361203/ccs	chr17	-	164	1	Intergenic	novelGene_8539	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTTAAAAAAAAAAAGAAAC	9913	False	NA	NA	False	NA	NA	NA	34111103	34110939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_34110900_34111100
m54284U_201217_021426/87361977/ccs	chr13	-	185	1	Intergenic	novelGene_7079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	54624730	54624545	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_54624500_54624700
m54284U_201217_021426/87427127/ccs	chr10	-	196	1	Intergenic	novelGene_5626	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGGCATTTTGTTATA	3242	False	NA	NA	False	NA	NA	NA	128182856	128182660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128182700_128182900
m54284U_201217_021426/87558923/ccs	chr4	+	208	1	Intergenic	novelGene_1785	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAAACCCTTGTTTCT	NA	False	NA	NA	False	NA	NA	NA	33005762	33005970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_33005800_33006000
m54284U_201217_021426/87689317/ccs	chr14	-	163	1	Intergenic	novelGene_7555	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	79620634	79620471	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_79620500_79620600
m54284U_201217_021426/88080506/ccs	chr3	-	185	1	Intergenic	novelGene_1688	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGATGAAAGATGGTCGAA	NA	False	NA	NA	False	NA	NA	NA	131393427	131393242	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_131393200_131393400
m54284U_201217_021426/88082799/ccs	chr12	+	186	1	Intergenic	novelGene_6546	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTGAAATGAACTACCC	2743	False	NA	NA	False	NA	NA	NA	4604719	4604905	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_4604700_4604900
m54284U_201217_021426/88147140/ccs	chr4	+	174	1	Intergenic	novelGene_2260	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGAGCGAGTGGGACT	NA	False	NA	NA	False	NA	NA	NA	136133122	136133296	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_136133100_136133300
m54284U_201217_021426/88211470/ccs	chr5	-	249	1	Intergenic	novelGene_2592	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATTTTTAAAATAAAAAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	65874637	65874388	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_65874400_65874600
m54284U_201217_021426/88408215/ccs	chr5	-	195	1	Intergenic	novelGene_2589	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACCCCCCCCCAAAAGGAA	NA	False	NA	NA	False	NA	NA	NA	65710800	65710605	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_65710600_65710800
m54284U_201217_021426/88474418/ccs	chr12	-	2795	1	FSM	ENSMUSG00002076190.1	ENSMUST00020183529.1	91	1	-14	-2690	-14	2690	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	9947	False	NA	NA	False	NA	NA	NA	55867952	55865157	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_-_55865200_55868000
m54284U_201217_021426/88476431/ccs	chr10	-	185	1	Intergenic	novelGene_5247	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCCTGATGCTAATTAT	NA	False	NA	NA	False	NA	NA	NA	32680280	32680095	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_32680100_32680300
m54284U_201217_021426/88607330/ccs	chr4	-	169	1	Intergenic	novelGene_1818	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAAAAAAGAACTTTATA	NA	False	NA	NA	False	NA	NA	NA	41345597	41345428	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_41345400_41345600
m54284U_201217_021426/88736719/ccs	chr8	-	167	1	Intergenic	novelGene_4193	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTCTTAAAAAAAAAAAAG	NA	False	NA	NA	False	NA	NA	NA	4397200	4397033	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_4397000_4397200
m54284U_201217_021426/88737446/ccs	chr9	-	193	1	Intergenic	novelGene_5019	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGCAGATGCCTGAAGG	NA	False	NA	NA	False	NA	NA	NA	96952524	96952331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_96952300_96952500
m54284U_201217_021426/88867016/ccs	chr4	-	195	1	Intergenic	novelGene_2129	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGGAAGGAGAAATGGAGG	NA	False	NA	NA	False	NA	NA	NA	126970725	126970530	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_126970500_126970700
m54284U_201217_021426/88867510/ccs	chr9	+	165	1	Intergenic	novelGene_4892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTTTAAAAAAGATCTGA	7403	False	NA	NA	False	NA	NA	NA	65921733	65921898	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_+_65921700_65921900
m54284U_201217_021426/88933657/ccs	chr15	-	219	1	Intergenic	novelGene_7774	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGAGACCAGGGGCTG	NA	False	NA	NA	False	NA	NA	NA	76250793	76250574	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_76250600_76250800
m54284U_201217_021426/88935119/ccs	chr5	+	189	1	Intergenic	novelGene_2694	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTGGTGCTAGAGCCAA	NA	False	NA	NA	False	NA	NA	NA	100620638	100620827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_100620600_100620800
m54284U_201217_021426/89064080/ccs	chr10	-	5046	1	NIC	ENSMUSG00000055053.19	novel	6237	9	NA	NA	-746	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAGAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-5	NA	81237134	81232088	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr10_-_81232100_81237100
m54284U_201217_021426/8913233/ccs	chr2	-	710	1	Intergenic	novelGene_783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGGCATGTTCCCCTCA	NA	False	NA	NA	False	NA	NA	NA	41488526	41487816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_41487800_41488500
m54284U_201217_021426/8915768/ccs	chrX	+	184	1	Intergenic	novelGene_9581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATACAAATCAAAACTAC	NA	False	NA	NA	False	NA	NA	NA	102285902	102286086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_102285900_102286100
m54284U_201217_021426/89261855/ccs	chr2	+	191	1	Intergenic	novelGene_1006	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTTATGTAAATCAGA	NA	False	NA	NA	False	NA	NA	NA	119339832	119340023	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_119339800_119340000
m54284U_201217_021426/89393931/ccs	chr5	-	170	1	Intergenic	novelGene_2943	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTTAAAAAAAAATAAGTG	NA	False	NA	NA	False	NA	NA	NA	129799948	129799778	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_129799800_129799900
m54284U_201217_021426/89456779/ccs	chr7	+	2461	1	Genic_Genomic	ENSMUSG00000025326.13	novel	NA	NA	NA	NA	5627	62	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTCTTGTTATCTTTG	NA	False	NA	1	True	NA	NA	NA	58958885	58961346	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr7_+_58958900_58961300
m54284U_201217_021426/89458843/ccs	chrX	+	212	1	Intergenic	novelGene_9578	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTTTTCTTTTTCTT	NA	False	NA	NA	False	NA	NA	NA	102182378	102182590	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_+_102182400_102182600
m54284U_201217_021426/89590289/ccs	chr9	-	190	1	Intergenic	novelGene_4631	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAAGTCAAGTCTTCTAAG	NA	False	NA	NA	False	NA	NA	NA	13583711	13583521	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_13583500_13583700
m54284U_201217_021426/89654564/ccs	chr11	+	195	1	Intergenic	novelGene_6375	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCATGTTGTCCACCAAA	4424	False	NA	NA	False	NA	NA	NA	105096652	105096847	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_105096700_105096800
m54284U_201217_021426/89719080/ccs	chr14	-	184	1	Intergenic	novelGene_7581	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGAGTGCCTTGGGCA	NA	False	NA	NA	False	NA	NA	NA	99607698	99607514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_99607500_99607700
m54284U_201217_021426/89721445/ccs	chr17	+	176	1	Intergenic	novelGene_8391	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAAAAAAGTTTTT	8855	False	NA	NA	False	NA	NA	NA	21659490	21659666	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_+_21659500_21659700
m54284U_201217_021426/89721614/ccs	chr7	-	190	1	Intergenic	novelGene_3810	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTGTACTCTAATATAA	NA	False	NA	NA	False	NA	NA	NA	42304906	42304716	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_42304700_42304900
m54284U_201217_021426/89784553/ccs	chr15	-	187	1	Intergenic	novelGene_8012	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCAATATCTTTTAAAAT	NA	False	NA	NA	False	NA	NA	NA	102458966	102458779	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_102458800_102459000
m54284U_201217_021426/8978697/ccs	chr11	-	191	1	Intergenic	novelGene_6351	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	570	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGGCATGGTGGCACACG	6289	False	NA	NA	False	NA	NA	NA	102171430	102171239	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_102171200_102171400
m54284U_201217_021426/8980887/ccs	chr18	+	164	1	Intergenic	novelGene_8977	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	61763031	61763195	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_61763000_61763200
m54284U_201217_021426/89916839/ccs	chr18	-	165	1	Intergenic	novelGene_9040	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGGACGTGGTGGTACACG	NA	False	NA	NA	False	NA	NA	NA	77844053	77843888	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77843900_77844100
m54284U_201217_021426/89980945/ccs	chr8	-	187	1	Intergenic	novelGene_4367	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATCAGGGTCTTCA	4078	False	NA	NA	False	NA	NA	NA	84933307	84933120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_84933100_84933300
m54284U_201217_021426/90113008/ccs	chr1	-	1002	1	Genic_Genomic	ENSMUSG00000026484.14	novel	NA	NA	NA	NA	-31	-23084	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCGGTCTTGGAAACTTTG	NA	False	NA	NA	False	NA	NA	NA	151376737	151375735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr1_-_151375700_151376700
m54284U_201217_021426/90114870/ccs	chr17	-	194	1	Intergenic	novelGene_8613	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATCAGTGATGAATATTT	NA	False	NA	NA	False	NA	NA	NA	46496280	46496086	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_46496100_46496300
m54284U_201217_021426/90178571/ccs	chr6	+	176	1	Intergenic	novelGene_3331	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	72822778	72822954	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_72822800_72823000
m54284U_201217_021426/90179063/ccs	chr1	-	208	2	Intergenic	novelGene_281	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	164	junction_1	0	184	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGTTTCTTAAACCAAA	NA	False	NA	NA	False	NA	NA	NA	120226824	120021578	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_120021737_120226774
m54284U_201217_021426/90244537/ccs	chr6	-	173	1	Intergenic	novelGene_3554	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGAGCCGGTGGCTTC	NA	False	NA	NA	False	NA	NA	NA	135855648	135855475	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_135855500_135855600
m54284U_201217_021426/9044754/ccs	chr4	-	197	1	Intergenic	novelGene_2370	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTTCCTTATCTATCC	NA	False	NA	NA	False	NA	NA	NA	148574769	148574572	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_148574600_148574800
m54284U_201217_021426/90506647/ccs	chr11	+	312	1	Intergenic	novelGene_6400	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CCAAAATAAAAAAACAACAA	NA	False	NA	NA	False	NA	NA	NA	106910779	106911091	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_106910800_106911100
m54284U_201217_021426/90571356/ccs	chr2	+	197	1	Intergenic	novelGene_812	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	590	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAACACCAGATTTCGA	NA	False	NA	NA	False	NA	NA	NA	60325243	60325440	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_60325200_60325400
m54284U_201217_021426/90572891/ccs	chr1	-	212	1	Intergenic	novelGene_413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGGGCTGGAACACTCA	NA	False	NA	NA	False	NA	NA	NA	156510605	156510393	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_156510400_156510600
m54284U_201217_021426/90639033/ccs	chr18	-	189	1	Intergenic	novelGene_8920	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAATTATTTCGAGCAAG	6563	False	NA	NA	False	NA	NA	NA	37992965	37992776	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_37992800_37993000
m54284U_201217_021426/90701978/ccs	chr15	-	1782	1	Genic_Genomic	ENSMUSG00000009575.15	novel	NA	NA	NA	NA	-26	-24979	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGGGGGGGGGGGGAC	NA	False	NA	NA	False	NA	NA	NA	103148269	103146487	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr15_-_103146500_103148300
m54284U_201217_021426/90767882/ccs	chr4	-	182	1	Intergenic	novelGene_1892	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGAAGCTGATGGATT	NA	False	NA	NA	False	NA	NA	NA	62397406	62397224	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_62397200_62397400
m54284U_201217_021426/90835519/ccs	chr1	+	289	1	Intergenic	novelGene_482	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTTTTGGGCAGGATT	NA	False	NA	NA	False	GGGGCT	-43	NA	171879015	171879304	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_171879000_171879300
m54284U_201217_021426/90898674/ccs	chr9	-	175	1	Intergenic	novelGene_5021	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAAGATGCAGTAT	3420	False	NA	NA	False	NA	NA	NA	96963180	96963005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_96963000_96963200
m54284U_201217_021426/90900306/ccs	chr4	-	201	1	ISM	ENSMUSG00000037242.9	ENSMUST00000143370.2	3093	3	46980	2170	46980	-2170	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTGGGATCCGGCTA	NA	False	NA	NA	False	NA	NA	NA	134953145	134952944	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr4_-_134952900_134953100
m54284U_201217_021426/90900768/ccs	chr5	+	4909	1	NIC	ENSMUSG00000034021.16	novel	6598	35	NA	NA	0	-69878	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAGAAGAAAGAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	150597291	150602200	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr5_+_150597300_150602200
m54284U_201217_021426/90901033/ccs	chr11	-	173	1	Intergenic	novelGene_6307	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAGAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	98753108	98752935	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_98752900_98753100
m54284U_201217_021426/90966764/ccs	chr6	+	355	1	Intergenic	novelGene_3199	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAATTGTAAGTAAATC	NA	False	NA	NA	False	NA	NA	NA	38336213	38336568	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_38336200_38336600
m54284U_201217_021426/91030394/ccs	chr11	-	1760	1	NIC	ENSMUSG00000020321.17	novel	1958	9	NA	NA	128	-7151	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	21521806	21520046	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_21520000_21521800
m54284U_201217_021426/91095390/ccs	chr4	+	198	1	Intergenic	novelGene_2168	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCCAAAGGAGGCAGAG	NA	False	NA	NA	False	NA	NA	NA	130235071	130235269	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_130235100_130235300
m54284U_201217_021426/91226995/ccs	chr6	-	219	1	Intergenic	novelGene_3135	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTTGTATACTACACA	NA	False	NA	NA	False	NA	NA	NA	29741478	29741259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_29741300_29741500
m54284U_201217_021426/91227990/ccs	chr13	+	202	1	Intergenic	novelGene_7236	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTCAAGCTCAATGTT	5601	False	NA	NA	False	NA	NA	NA	92780625	92780827	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_+_92780600_92780800
m54284U_201217_021426/91357692/ccs	chr14	+	6768	1	Intergenic	novelGene_7430	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGCCTTAGCTCCGT	NA	False	NA	NA	False	NA	NA	NA	49839816	49846584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_49839800_49846600
m54284U_201217_021426/91357799/ccs	chr3	+	3853	1	Genic_Genomic	ENSMUSG00000028156.13	novel	NA	NA	NA	NA	5513	524	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCTGGCAGCCTCAC	NA	False	NA	NA	False	AATAAA	-22	NA	138262128	138265981	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr3_+_138262100_138266000
m54284U_201217_021426/91424656/ccs	chr7	+	168	1	Intergenic	novelGene_4011	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTAAAGTTATAGGAT	NA	False	NA	NA	False	NA	NA	NA	109279584	109279752	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_109279600_109279800
m54284U_201217_021426/91489489/ccs	chr17	-	265	1	Intergenic	novelGene_8783	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCCATGACCACTAAGCC	NA	False	NA	NA	False	NA	NA	NA	88554733	88554468	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_88554500_88554700
m54284U_201217_021426/91489901/ccs	chr2	-	195	1	Intergenic	novelGene_573	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAAAGAACGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	5036614	5036419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_5036400_5036600
m54284U_201217_021426/91491127/ccs	chr12	+	3344	1	FSM	ENSMUSG00000021908.11	ENSMUST00000022467.11	1878	1	0	-1466	0	1466	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACCAGCAAATTCAGTAT	NA	False	NA	NA	False	NA	NA	NA	119224712	119228056	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr12_+_119224700_119228100
m54284U_201217_021426/91555341/ccs	chr18	+	4097	1	NIC	ENSMUSG00000024594.10	novel	5030	9	NA	NA	7847	-209	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTAAATAGGACTGT	NA	False	NA	NA	False	NA	NA	NA	57521719	57525816	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr18_+_57521700_57525800
m54284U_201217_021426/91555502/ccs	chr11	-	191	1	Intergenic	novelGene_6357	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTCTCTTTTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	103041575	103041384	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_103041400_103041600
m54284U_201217_021426/91621739/ccs	chr11	-	184	1	Intergenic	novelGene_6080	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTTTATTACATGTTAT	NA	False	NA	NA	False	NA	NA	NA	79216222	79216038	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_79216000_79216200
m54284U_201217_021426/91686627/ccs	chr6	+	187	1	Intergenic	novelGene_3518	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTATTTGTATCCATATG	762	False	NA	NA	False	NA	NA	NA	125433540	125433727	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_+_125433500_125433700
m54284U_201217_021426/91686769/ccs	chr2	-	5347	1	NIC	ENSMUSG00000009555.17	novel	1733	7	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCGTTTCCTGTGTTC	NA	False	NA	NA	False	ATTAAA	-25	NA	32602796	32597449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr2_-_32597400_32602800
m54284U_201217_021426/91751115/ccs	chr7	+	197	1	Intergenic	novelGene_3976	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTTTCTTTTAGAAAAGA	7632	False	NA	NA	False	NA	NA	NA	100380038	100380235	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_100380000_100380200
m54284U_201217_021426/917526/ccs	chr18	-	191	1	Intergenic	novelGene_8850	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTCCCAAAACATACAG	NA	False	NA	NA	False	NA	NA	NA	30723942	30723751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_30723800_30723900
m54284U_201217_021426/91816638/ccs	chr4	+	177	1	Intergenic	novelGene_1820	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTACATTATCAAAATCCTG	8564	False	NA	NA	False	NA	NA	NA	41367456	41367633	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_41367500_41367600
m54284U_201217_021426/91817231/ccs	chr13	-	7591	1	NIC	ENSMUSG00000021374.11	novel	6109	22	NA	NA	-871	-1449	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAACCAGGTACAGATGA	NA	False	NA	NA	False	NA	NA	NA	46862164	46854573	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr13_-_46854600_46862200
m54284U_201217_021426/91817537/ccs	chr19	-	183	1	Intergenic	novelGene_9153	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTTCTCTCTCTCTCT	NA	False	NA	NA	False	NA	NA	NA	8841168	8840985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_8841000_8841200
m54284U_201217_021426/91882833/ccs	chr11	-	209	1	Intergenic	novelGene_6453	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTATCACAGCATCTCTG	451	False	NA	NA	False	NA	NA	NA	115420035	115419826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_115419800_115420000
m54284U_201217_021426/919243/ccs	chr10	-	168	1	Intergenic	novelGene_5619	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	NA	False	NA	NA	False	NA	NA	NA	128028101	128027933	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_128027900_128028100
m54284U_201217_021426/91947064/ccs	chr11	-	671	1	Antisense	novelGene_ENSMUSG00000004018.10_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATATTGTATGCTGATT	NA	False	NA	-17	True	AATAAA	-19	NA	26337431	26336760	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr11_-_26336800_26337400
m54284U_201217_021426/92209375/ccs	chr11	-	186	1	Intergenic	novelGene_6240	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTATACACCTGTAAATC	NA	False	NA	NA	False	NA	NA	NA	95842672	95842486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_95842500_95842700
m54284U_201217_021426/92210669/ccs	chr11	-	4841	4	NIC	ENSMUSG00000025575.15	novel	2873	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	81	junction_3	41.9867704031745	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTCTATGTTGGC	8992	False	NA	-1	True	AATAAA	-17	NA	118309878	118297114	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr11_-_118298921_118299506_118302338_118308399_118308481_118309755
m54284U_201217_021426/92210790/ccs	chr2	-	3376	17	NNC	ENSMUSG00000027184.15	novel	4069	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	608.564486619947	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAGTACTGGTGGAAT	NA	False	NA	-9	True	NA	NA	NA	103627318	103597451	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr2_-_103598827_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605844_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
m54284U_201217_021426/92274725/ccs	chr8	+	199	1	Intergenic	novelGene_4579	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTCAGAGCGGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	123967741	123967940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_+_123967700_123967900
m54284U_201217_021426/92406033/ccs	chr1	-	212	1	Intergenic	novelGene_131	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGAATCCAGTGGTATTC	NA	False	NA	NA	False	NA	NA	NA	58189415	58189203	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_58189200_58189400
m54284U_201217_021426/92471733/ccs	chr5	-	176	1	Intergenic	novelGene_2612	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73067187	73067011	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_73067000_73067200
m54284U_201217_021426/92602558/ccs	chr10	-	185	1	Intergenic	novelGene_5362	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGTCAAAGGCAATGCT	NA	False	NA	NA	False	NA	NA	NA	62977504	62977319	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_62977300_62977500
m54284U_201217_021426/92602685/ccs	chr7	+	158	1	Intergenic	novelGene_3987	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAACATGAC	NA	False	NA	NA	False	NA	NA	NA	101473992	101474150	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_+_101474000_101474200
m54284U_201217_021426/92669665/ccs	chr14	-	169	1	Intergenic	novelGene_7597	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAAGGAACTTTGG	2636	False	NA	NA	False	NA	NA	NA	118691156	118690987	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_118691000_118691200
m54284U_201217_021426/92736243/ccs	chr2	-	192	1	Intergenic	novelGene_1222	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACACTTCAAGTTTTAA	NA	False	NA	NA	False	NA	NA	NA	164946837	164946645	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_164946600_164946800
m54284U_201217_021426/92799155/ccs	chr6	-	188	1	Intergenic	novelGene_3220	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAGATGTATGTATGTA	NA	False	NA	NA	False	NA	NA	NA	39355238	39355050	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_39355000_39355200
m54284U_201217_021426/92865072/ccs	chrX	-	175	1	Intergenic	novelGene_9378	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	8153464	8153289	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_8153300_8153500
m54284U_201217_021426/92930291/ccs	chr5	+	202	1	Intergenic	novelGene_3041	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTATTATTAAATTAAT	309	False	NA	NA	False	NA	NA	NA	142961503	142961705	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_+_142961500_142961700
m54284U_201217_021426/92997488/ccs	chr10	-	193	1	Intergenic	novelGene_5413	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTACAAGTCACCGGGCAG	NA	False	NA	NA	False	NA	NA	NA	75683156	75682963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_75683000_75683200
m54284U_201217_021426/93061683/ccs	chr9	-	6712	1	Genic_Genomic	ENSMUSG00000032113.17	novel	NA	NA	NA	NA	12843	5291	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTCCCTTCTCTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	36621198	36614486	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr9_-_36614500_36621200
m54284U_201217_021426/93062751/ccs	chr16	-	173	1	Intergenic	novelGene_8084	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAGAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	14140994	14140821	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_14140800_14141000
m54284U_201217_021426/93128069/ccs	chr18	-	192	1	Intergenic	novelGene_8839	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATTAGCTATAGCATA	NA	False	NA	NA	False	NA	NA	NA	21523153	21522961	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_21523000_21523200
m54284U_201217_021426/93259734/ccs	chr11	-	183	1	Intergenic	novelGene_6114	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAAGGAAAACACAA	NA	False	NA	NA	False	NA	NA	NA	80331777	80331594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_80331600_80331800
m54284U_201217_021426/93260492/ccs	chr2	+	181	1	Intergenic	novelGene_954	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAGATGCCTACAAAGG	NA	False	NA	NA	False	NA	NA	NA	97761559	97761740	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_97761600_97761700
m54284U_201217_021426/93520174/ccs	chr4	+	188	1	Intergenic	novelGene_2178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAACAAAATAATTTT	NA	False	NA	NA	False	NA	NA	NA	131264406	131264594	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_131264400_131264600
m54284U_201217_021426/93586249/ccs	chr1	-	185	1	Intergenic	novelGene_196	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGCATGGCTTAA	244	False	NA	NA	False	NA	NA	NA	75142435	75142250	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_75142200_75142400
m54284U_201217_021426/93651351/ccs	chr12	-	235	1	Intergenic	novelGene_6656	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGAAAGAAAGGAGGGGA	NA	False	NA	NA	False	NA	NA	NA	55663959	55663724	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_55663700_55664000
m54284U_201217_021426/9372444/ccs	chr16	-	168	1	Intergenic	novelGene_8282	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATTTTAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	55770503	55770335	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_55770300_55770500
m54284U_201217_021426/9373568/ccs	chr2	-	204	1	Intergenic	novelGene_1017	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGAAAGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	120418653	120418449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_-_120418400_120418700
m54284U_201217_021426/9373945/ccs	chr3	-	191	1	Intergenic	novelGene_1633	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAACCACCACCACCAGAA	NA	False	NA	NA	False	NA	NA	NA	108660434	108660243	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_108660200_108660400
m54284U_201217_021426/9374363/ccs	chr16	-	3418	1	Antisense	novelGene_ENSMUSG00000022686.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATGTATTTAGTCTTTT	NA	False	NA	NA	False	NA	NA	NA	19587200	19583782	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr16_-_19583800_19587200
m54284U_201217_021426/93782211/ccs	chr4	+	207	1	Intergenic	novelGene_1799	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAATGCATATTATTA	NA	False	NA	NA	False	NA	NA	NA	35166510	35166717	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_35166500_35166700
m54284U_201217_021426/93914671/ccs	chr6	-	182	1	Intergenic	novelGene_3368	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAATAAAATAAGAA	5193	False	NA	NA	False	NA	NA	NA	86511096	86510914	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_86510900_86511100
m54284U_201217_021426/93914846/ccs	chr9	-	176	1	Intergenic	novelGene_4860	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAATAAGAATAAAAA	9805	False	NA	NA	False	NA	NA	NA	64174486	64174310	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_64174300_64174500
m54284U_201217_021426/93978820/ccs	chr9	-	187	1	Intergenic	novelGene_4768	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGCAGATATGGGTTGG	NA	False	NA	NA	False	NA	NA	NA	53514224	53514037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_53514000_53514200
m54284U_201217_021426/94045080/ccs	chr3	+	313	1	Intergenic	novelGene_1668	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCGCTGACCCAGTTAG	NA	False	NA	26	True	AATAAA	-15	NA	122778347	122778660	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_122778300_122778700
m54284U_201217_021426/94109957/ccs	chr11	+	206	1	Intergenic	novelGene_6242	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	103	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTAATAATCATTTCT	NA	False	NA	NA	False	NA	NA	NA	95904301	95904507	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_95904300_95904500
m54284U_201217_021426/94110064/ccs	chr15	-	5559	1	FSM	ENSMUSG00000105167.4	ENSMUST00000199549.4	108	1	-399	-5052	-399	5052	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGTTTTCCCACATTT	3571	False	NA	-5	True	AATAAA	-13	NA	79967554	79961995	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr15_-_79962000_79967600
m54284U_201217_021426/94110553/ccs	chr4	-	904	1	FSM	ENSMUSG00000078480.4	ENSMUST00000121413.2	636	1	-61	-207	-61	207	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGATAAAACAGAA	4740	False	NA	NA	False	AATAAA	-35	NA	88518108	88517204	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr4_-_88517200_88518100
m54284U_201217_021426/94110673/ccs	chr15	-	209	1	Intergenic	novelGene_7824	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAAGAGCTCCAGA	9374	False	NA	NA	False	NA	NA	NA	80089556	80089347	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_80089300_80089600
m54284U_201217_021426/94175504/ccs	chr9	-	194	1	Intergenic	novelGene_4908	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATACAGAGGGGCTGGAGA	NA	False	NA	NA	False	NA	NA	NA	68681134	68680940	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_68680900_68681100
m54284U_201217_021426/94176544/ccs	chr3	+	175	1	Intergenic	novelGene_1511	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	89025989	89026164	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_89026000_89026200
m54284U_201217_021426/94241979/ccs	chr18	-	187	1	Intergenic	novelGene_9020	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTGTGTTATCACCTC	NA	False	NA	NA	False	NA	NA	NA	75225938	75225751	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_75225800_75225900
m54284U_201217_021426/94243411/ccs	chr7	+	4164	28	NNC	ENSMUSG00000034867.17	novel	4284	29	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	70.3864114270663	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCGTGCCATTTTTGTG	NA	False	NA	23	True	AGTAAA	-15	NA	35285674	35338651	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr7_+_35285795_35291176_35291308_35300914_35301072_35301855_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
m54284U_201217_021426/94307071/ccs	chr17	-	170	1	Intergenic	novelGene_8569	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAACCATTAACTG	NA	False	NA	NA	False	NA	NA	NA	35940633	35940463	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35940500_35940600
m54284U_201217_021426/94307871/ccs	chr4	-	189	1	Intergenic	novelGene_1891	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAGGAATGTCTGCACA	NA	False	NA	NA	False	NA	NA	NA	62286846	62286657	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_62286700_62286800
m54284U_201217_021426/94371923/ccs	chr16	-	194	1	Intergenic	novelGene_8320	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGGAGGGCTGCTGCC	NA	False	NA	NA	False	NA	NA	NA	90119593	90119399	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_90119400_90119600
m54284U_201217_021426/9440001/ccs	chr4	-	179	1	Intergenic	novelGene_2397	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATATTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	150338142	150337963	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_150338000_150338100
m54284U_201217_021426/94437750/ccs	chr7	-	205	1	Intergenic	novelGene_3657	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAATGGAGAGGAGTTAT	NA	False	NA	NA	False	AATAAA	-9	NA	13110398	13110193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_13110200_13110400
m54284U_201217_021426/94438546/ccs	chr19	-	195	1	Intergenic	novelGene_9348	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTCCGGAGCCTCCAGG	NA	False	NA	NA	False	NA	NA	NA	57392703	57392508	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_57392500_57392700
m54284U_201217_021426/94505548/ccs	chr1	-	161	1	Intergenic	novelGene_448	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAGAGCACTTGTT	NA	False	NA	NA	False	NA	NA	NA	165143001	165142840	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_165142800_165143000
m54284U_201217_021426/94569313/ccs	chr12	-	152	1	Intergenic	novelGene_6714	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	73071831	73071679	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_73071700_73071800
m54284U_201217_021426/94569568/ccs	chr10	+	179	1	Intergenic	novelGene_5618	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAACAATAAAAATTA	5553	False	NA	NA	False	NA	NA	NA	128020794	128020973	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128020800_128021000
m54284U_201217_021426/94570665/ccs	chrX	-	4070	17	NNC	ENSMUSG00000025266.12	novel	4869	16	NA	NA	65	0	at_least_one_novel_splicesite	TRUE	canonical	1	58	junction_1	126.950024000589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGAGACTGTTTTCA	NA	False	NA	-16	True	NA	NA	NA	149800253	149766136	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chrX_-_149766773_149767506_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
m54284U_201217_021426/94571073/ccs	chr5	-	183	1	Intergenic	novelGene_2897	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGCTGGAGAGATGGCTA	NA	False	NA	NA	False	NA	NA	NA	124499294	124499111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_124499100_124499300
m54284U_201217_021426/94699670/ccs	chr19	-	173	1	Intergenic	novelGene_9178	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTTAAAAAAAAGATTAAAA	NA	False	NA	NA	False	NA	NA	NA	21722186	21722013	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_21722000_21722200
m54284U_201217_021426/94700380/ccs	chr17	-	168	1	Intergenic	novelGene_8772	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAACAAAAAAACAAAA	NA	False	NA	NA	False	NA	NA	NA	86088760	86088592	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_86088600_86088800
m54284U_201217_021426/94700966/ccs	chr14	-	192	1	Intergenic	novelGene_7551	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAGCATTGTTAAGGG	9526	False	NA	NA	False	NA	NA	NA	77726081	77725889	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_77725900_77726100
m54284U_201217_021426/94765246/ccs	chr5	+	4322	1	Genic_Genomic	ENSMUSG00000066735.9	novel	NA	NA	NA	NA	6806	1429	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGACTTGGATTGGAGAG	NA	False	NA	NA	False	AATAAA	-22	NA	130012640	130016962	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr5_+_130012600_130017000
m54284U_201217_021426/95160047/ccs	chrX	-	157	1	Genic_Genomic	ENSMUSG00000087403.10	novel	NA	NA	NA	NA	-1906	36	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAATTTAACTTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	151102913	151102756	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chrX_-_151102800_151102900
m54284U_201217_021426/95224314/ccs	chr5	-	516	1	Intergenic	novelGene_2822	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAATAAAAGCATGC	NA	False	NA	NA	False	AATAAA	-41	NA	117538726	117538210	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_117538200_117538700
m54284U_201217_021426/95224999/ccs	chr15	-	178	1	Intergenic	novelGene_7895	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGCAGTGGTGGCACA	NA	False	NA	NA	False	NA	NA	NA	86080492	86080314	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_86080300_86080500
m54284U_201217_021426/95289487/ccs	chr15	-	6471	1	NIC	ENSMUSG00000116295.2	novel	593	4	NA	NA	0	161	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAATTGCAATCCAGG	NA	False	NA	NA	False	NA	NA	NA	97065123	97058652	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr15_-_97058700_97065100
m54284U_201217_021426/95289492/ccs	chr19	+	193	1	Intergenic	novelGene_9311	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTGTATAATTCAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	46215530	46215723	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_+_46215500_46215700
m54284U_201217_021426/95291012/ccs	chr10	+	187	1	Intergenic	novelGene_5562	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCACAGCTGTGCTACAT	NA	False	NA	NA	False	NA	NA	NA	118959144	118959331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_118959100_118959300
m54284U_201217_021426/95355652/ccs	chr16	-	4206	1	Intergenic	novelGene_8297	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCTGGTTTGTTGAGT	NA	False	NA	NA	False	NA	NA	NA	68423509	68419303	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_-_68419300_68423500
m54284U_201217_021426/95422141/ccs	chr9	-	1410	1	FSM	ENSMUSG00000058922.8	ENSMUST00000168019.2	960	1	-81	-369	-81	369	mono-exon	FALSE	NA	NA	NA	NA	NA	768	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTGGAAACAAAAATCAG	NA	False	NA	NA	False	AATAAA	-38	NA	123519338	123517928	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr9_-_123517900_123519300
m54284U_201217_021426/95423204/ccs	chr18	-	185	1	Intergenic	novelGene_8841	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGTTCTTTATATCAAA	NA	False	NA	NA	False	NA	NA	NA	24183699	24183514	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_24183500_24183700
m54284U_201217_021426/95423322/ccs	chr1	+	200	1	Intergenic	novelGene_101	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAATATCAGACAGCCCA	4063	False	NA	NA	False	NA	NA	NA	40014117	40014317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_+_40014100_40014300
m54284U_201217_021426/95486901/ccs	chr12	-	195	1	Intergenic	novelGene_6609	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGACTCATCCCTCTCTG	5342	False	NA	NA	False	NA	NA	NA	28881072	28880877	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_-_28880900_28881100
m54284U_201217_021426/95487367/ccs	chr9	-	168	1	Intergenic	novelGene_4946	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATTTCTTTAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	73753194	73753026	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_73753000_73753200
m54284U_201217_021426/95488816/ccs	chr11	-	171	1	Intergenic	novelGene_6415	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCTTTAAAAAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	107221112	107220941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_107220900_107221100
m54284U_201217_021426/95552379/ccs	chr4	+	3117	1	NIC	ENSMUSG00000006442.11	novel	1338	7	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCATTTTTGTTCCTA	8716	False	NA	28	True	AATACA	-36	NA	148675959	148679076	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr4_+_148676000_148679100
m54284U_201217_021426/95617823/ccs	chrX	-	166	1	Intergenic	novelGene_9707	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTTAAATCAAGATGA	NA	False	NA	NA	False	NA	NA	NA	159056543	159056377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_159056400_159056500
m54284U_201217_021426/95617968/ccs	chr4	+	304	1	Intergenic	novelGene_2164	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTATGACTTATTTATTC	6450	False	NA	NA	False	ATTAAA	-7	NA	129779005	129779309	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_129779000_129779300
m54284U_201217_021426/95749254/ccs	chr9	-	189	1	Intergenic	novelGene_4677	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGCAAGGAGAAGATACA	NA	False	NA	NA	False	NA	NA	NA	22400105	22399916	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_22399900_22400100
m54284U_201217_021426/95750911/ccs	chr3	+	161	1	Intergenic	novelGene_1472	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAACAAACAAAC	NA	False	NA	NA	False	NA	NA	NA	87789502	87789663	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_87789500_87789700
m54284U_201217_021426/95750989/ccs	chr13	-	109	1	Intergenic	novelGene_7259	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	305	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGCCCTTCACCGCCCTAA	NA	False	NA	NA	False	NA	NA	NA	97240347	97240238	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr13_-_97240200_97240300
m54284U_201217_021426/95814439/ccs	chr3	-	185	1	Intergenic	novelGene_1647	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGACTTCAGATGTTG	NA	False	NA	NA	False	NA	NA	NA	117298685	117298500	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_117298500_117298700
m54284U_201217_021426/95816211/ccschrUn	chrUn_JH584304v1	-	4383	5	Intergenic	novelGene_9762	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	517	junction_3	147.775167061316	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGCTTTGAATTTTGTT	NA	False	NA	NA	False	ATTAAA	-23	NA	59701	52665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_54480_54720_54868_55111_57152_58563_58836_59591
m54284U_201217_021426/95882071/ccs	chr18	-	197	1	Intergenic	novelGene_9033	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGGTGTCTCAGCTTGA	6786	False	NA	NA	False	NA	NA	NA	77725945	77725748	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_77725700_77725900
m54284U_201217_021426/95944749/ccs	chr5	-	742	1	FSM	ENSMUSG00000080875.5	ENSMUST00000118351.3	454	1	0	-288	0	288	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCATGAAAGAGGAAGGA	NA	False	NA	NA	False	NA	NA	NA	9311388	9310646	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_chr5_-_9310600_9311400
m54284U_201217_021426/95945250/ccs	chr2	-	2272	1	Genic_Genomic	ENSMUSG00000082332.3	novel	NA	NA	NA	NA	-113	410	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACTAGCATGTAGATT	NA	False	NA	NA	False	AATAAA	-21	NA	6138880	6136608	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_6136600_6138900
m54284U_201217_021426/95947095/ccs	chr8	+	1872	1	NIC	ENSMUSG00000038482.12	novel	2511	12	NA	NA	7106	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGCTCTGTGTTTCTG	1084	False	NA	88	True	AATAAA	-18	NA	13426570	13428442	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr8_+_13426600_13428400
m54284U_201217_021426/96010657/ccs	chr13	-	180	1	ISM	ENSMUSG00000052909.9	ENSMUST00000171257.4	2904	3	10420	138	10420	-138	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATGTTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	67911150	67910970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr13_-_67911000_67911200
m54284U_201217_021426/96142349/ccs	chr18	-	200	1	Intergenic	novelGene_8899	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	930	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACATATGAAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	35897490	35897290	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_-_35897300_35897500
m54284U_201217_021426/96142904/ccs	chr7	-	189	1	Intergenic	novelGene_4132	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATTTAAAGAAAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	132748773	132748584	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_132748600_132748800
m54284U_201217_021426/96143928/ccs	chr17	-	5222	1	Genic_Genomic	ENSMUSG00000117183.2	novel	NA	NA	NA	NA	1283	3349	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTGAGTTTGCTTACT	NA	False	NA	-9	True	NA	NA	NA	22934635	22929413	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr17_-_22929400_22934600
m54284U_201217_021426/96207045/ccs	chr11	+	172	1	Intergenic	novelGene_6082	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAAAAGGATCAACTG	3809	False	NA	NA	False	NA	NA	NA	79280590	79280762	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_79280600_79280800
m54284U_201217_021426/96207888/ccs	chr9	-	172	1	Intergenic	novelGene_4655	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAACCTGTACTAA	9504	False	NA	NA	False	NA	NA	NA	21067683	21067511	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr9_-_21067500_21067700
m54284U_201217_021426/9635259/ccs	chr11	-	188	1	Intergenic	novelGene_6376	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATATGGGCCTTAAATGT	NA	False	NA	NA	False	NA	NA	NA	105107024	105106836	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_105106800_105107000
m54284U_201217_021426/96469087/ccs	chr11	-	537	2	NNC	ENSMUSG00000048445.7	novel	3403	19	NA	NA	20976	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGTCTTGTCCTACT	4480	False	NA	2	True	ATTAAA	-28	NA	120743521	120717354	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NNC_chr11_-_120717751_120743380
m54284U_201217_021426/96471541/ccs	chr10	+	202	1	Intergenic	novelGene_5632	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGCCTCAGCTAGTGTCT	467	False	NA	NA	False	NA	NA	NA	128391732	128391934	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_+_128391700_128391900
m54284U_201217_021426/96471844/ccs	chr4	+	154	1	Intergenic	novelGene_2167	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATTAATAAA	NA	False	NA	NA	False	NA	NA	NA	130192276	130192430	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_+_130192300_130192400
m54284U_201217_021426/96535022/ccs	chr12	+	168	1	Intergenic	novelGene_6602	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTTAAGAATATGGCC	NA	False	NA	NA	False	NA	NA	NA	26682817	26682985	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_26682800_26683000
m54284U_201217_021426/96601628/ccs	chr14	+	179	1	Intergenic	novelGene_7574	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAGTCAGCCCAT	2842	False	NA	NA	False	NA	NA	NA	99229011	99229190	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_99229000_99229200
m54284U_201217_021426/96666927/ccschrUn	chrUn_JH584304v1	-	6976	1	Intergenic	novelGene_9775	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	False	NA	NA	False	NA	NA	NA	59666	52690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrUn_JH584304v1_-_52700_59700
m54284U_201217_021426/96864521/ccs	chr3	-	183	1	Intergenic	novelGene_1381	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAAATCTGCCTGCCTC	384	False	NA	NA	False	NA	NA	NA	34761039	34760856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_-_34760900_34761000
m54284U_201217_021426/9699489/ccs	chr1	+	253	1	Antisense	novelGene_ENSMUSG00000100280.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAATGTAATTCCCGAG	9659	False	NA	NA	False	NA	NA	NA	34508064	34508317	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_34508100_34508300
m54284U_201217_021426/9700386/ccs	chr17	-	176	1	Intergenic	novelGene_8514	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTCTAAAAAAAAAAAA	2065	False	NA	NA	False	NA	NA	NA	31903795	31903619	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_31903600_31903800
m54284U_201217_021426/9701946/ccs	chr2	-	188	1	Genic_Genomic	ENSMUSG00000026950.19	novel	NA	NA	NA	NA	-140	2056	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAATAAAAAAGAATTAGG	NA	False	NA	NA	False	NA	NA	NA	52066189	52066001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Genic_Genomic_chr2_-_52066000_52066200
m54284U_201217_021426/9701954/ccs	chr17	-	140	1	Intergenic	novelGene_8568	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	870	False	NA	NA	False	NA	NA	NA	35935098	35934958	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr17_-_35935000_35935100
m54284U_201217_021426/97125864/ccs	chr1	-	192	1	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGAAAGAAAGAAATGAAA	NA	False	NA	NA	False	NA	NA	NA	9877771	9877579	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr1_-_9877600_9877800
m54284U_201217_021426/97190767/ccs	chrX	-	176	1	Intergenic	novelGene_9641	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTAAAGAATTGT	NA	False	NA	NA	False	NA	NA	NA	135921911	135921735	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_135921700_135921900
m54284U_201217_021426/97192593/ccs	chr14	+	1218	1	Antisense	novelGene_ENSMUSG00000021938.13_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCCTGGTCTGCTGTCTG	NA	False	NA	NA	False	NA	NA	NA	57015133	57016351	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr14_+_57015100_57016400
m54284U_201217_021426/97323421/ccs	chr4	-	2767	1	Antisense	novelGene_ENSMUSG00000065452.2_AS_novelGene_ENSMUSG00000028410.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGTTTGCCTGATCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	40722920	40720153	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr4_-_40720200_40722900
m54284U_201217_021426/97584652/ccs	chr14	+	126	1	Intergenic	novelGene_7383	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTAAAAAAAAGAATCTT	NA	False	NA	NA	False	NA	NA	NA	30464352	30464478	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_+_30464400_30464500
m54284U_201217_021426/97585569/ccs	chr12	+	184	1	Intergenic	novelGene_6558	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAACAAAACAAACAAACATT	4354	False	NA	NA	False	NA	NA	NA	8796790	8796974	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_8796800_8797000
m54284U_201217_021426/97847103/ccs	chr3	+	187	1	Intergenic	novelGene_1699	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATCTGAACAGGGAACTT	NA	False	NA	NA	False	NA	NA	NA	137547694	137547881	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_137547700_137547900
m54284U_201217_021426/97978272/ccs	chr1	+	3192	1	Antisense	novelGene_ENSMUSG00000026082.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTACAATGAAGACTTTA	NA	False	NA	NA	False	NA	NA	NA	38096505	38099697	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Antisense_chr1_+_38096500_38099700
m54284U_201217_021426/97979074/ccs	chr10	-	181	1	Intergenic	novelGene_5210	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACTAAAAGAAATGGCAAG	NA	False	NA	NA	False	NA	NA	NA	18406600	18406419	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr10_-_18406400_18406600
m54284U_201217_021426/98107843/ccs	chr7	-	173	1	Intergenic	novelGene_4059	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAGTGGGAGGGG	NA	False	NA	NA	False	NA	NA	NA	120403461	120403288	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_120403300_120403500
m54284U_201217_021426/98109302/ccs	chr2	+	223	1	Intergenic	novelGene_1091	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATGTCAGCCAAAAGGA	NA	False	NA	NA	False	NA	NA	NA	140294899	140295122	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_140294900_140295100
m54284U_201217_021426/98109348/ccs	chr19	-	206	1	Intergenic	novelGene_9086	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAACAACAACAACAACAACA	NA	False	NA	NA	False	NA	NA	NA	4500421	4500215	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr19_-_4500200_4500400
m54284U_201217_021426/98241319/ccs	chr9	-	4807	32	NIC	ENSMUSG00000034007.11	novel	5231	33	NA	NA	0	-365	combination_of_known_splicesites	FALSE	canonical	2	4	junction_30	14.2637559798044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTATCAAGTATTTTCTT	NA	False	NA	-4	True	AATAAA	-16	NA	55845394	55457531	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55828549_55828623_55845353
m54284U_201217_021426/98304400/ccs	chr7	-	178	1	Intergenic	novelGene_4016	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTTTAATTGAAACCTC	3204	False	NA	NA	False	NA	NA	NA	109669034	109668856	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_109668900_109669000
m54284U_201217_021426/9830473/ccs	chr3	+	190	1	Intergenic	novelGene_1477	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCTTGGGGGGCTGGAA	7043	False	NA	NA	False	NA	NA	NA	88037921	88038111	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr3_+_88037900_88038100
m54284U_201217_021426/98306037/ccs	chr7	-	176	1	Intergenic	novelGene_3745	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTTTTAAAAAAAGATA	9021	False	NA	NA	False	NA	NA	NA	28366532	28366356	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_28366400_28366500
m54284U_201217_021426/9831978/ccs	chr14	-	164	1	Intergenic	novelGene_7385	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAAATGTGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	31800911	31800747	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr14_-_31800700_31800900
m54284U_201217_021426/98437552/ccs	chr12	+	175	1	ISM	ENSMUSG00000113707.2	ENSMUST00000222619.2	1906	2	2052	0	2052	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGAAACCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	70961084	70961259	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	ISM_chr12_+_70961100_70961300
m54284U_201217_021426/984863/ccs	chr18	+	188	1	Intergenic	novelGene_8951	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTTAAAAAAAAAAAATACAG	NA	False	NA	NA	False	NA	NA	NA	47004783	47004971	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_47004800_47005000
m54284U_201217_021426/98765616/ccs	chr12	+	195	1	Intergenic	novelGene_6642	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATAAATAGATAATT	NA	False	NA	NA	False	NA	NA	NA	54762491	54762686	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr12_+_54762500_54762700
m54284U_201217_021426/98828950/ccs	chr15	-	1512	1	Intergenic	novelGene_7683	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGGTTTCCGTGTCGTTA	5663	False	NA	NA	False	NA	NA	NA	37074740	37073228	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_37073200_37074700
m54284U_201217_021426/98829744/ccs	chr6	-	172	1	Intergenic	novelGene_3171	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAAAGAAAAACAGAAA	NA	False	NA	0	True	NA	NA	NA	35151171	35150999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr6_-_35151000_35151200
m54284U_201217_021426/98893943/ccs	chr4	-	185	1	Intergenic	novelGene_2032	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATGGGATGAGACATCT	NA	False	NA	NA	False	NA	NA	NA	116708603	116708418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr4_-_116708400_116708600
m54284U_201217_021426/98894079/ccs	chr8	-	180	1	Intergenic	novelGene_4435	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACACACAAAGTACATAGAC	8545	False	NA	NA	False	NA	NA	NA	105925387	105925207	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr8_-_105925200_105925400
m54284U_201217_021426/98896310/ccs	chr7	-	312	1	Intergenic	novelGene_4102	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTGACAAATGTTGAGA	NA	False	NA	NA	False	NA	NA	NA	127237411	127237099	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_127237100_127237400
m54284U_201217_021426/9896594/ccs	chr15	-	172	1	Intergenic	novelGene_7861	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAATCTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	82129365	82129193	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr15_-_82129200_82129400
m54284U_201217_021426/99027613/ccs	chr7	-	185	1	Intergenic	novelGene_3624	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAGAAGAGGAAGA	NA	False	NA	NA	False	NA	NA	NA	3746562	3746377	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr7_-_3746400_3746600
m54284U_201217_021426/99091439/ccs	chr2	+	227	1	Intergenic	novelGene_876	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGGAATATGTCAAACA	7986	False	NA	NA	False	NA	NA	NA	75691191	75691418	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr2_+_75691200_75691400
m54284U_201217_021426/99092807/ccs	chr5	-	212	1	Intergenic	novelGene_2456	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGAGATAGCACCTGTG	9838	False	NA	NA	False	NA	NA	NA	8057828	8057616	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_8057600_8057800
m54284U_201217_021426/99420405/ccs	chr11	+	5486	1	Intergenic	novelGene_6292	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACCGTGTTGCGTTTTT	NA	False	NA	NA	False	NA	NA	NA	97958363	97963849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_+_97958400_97963800
m54284U_201217_021426/99485797/ccs	chr7	+	2730	1	NIC	ENSMUSG00000059070.17	novel	2989	7	NA	NA	0	0	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTCCTCTGTGTTCAT	5950	False	NA	9	True	AATAAA	-16	NA	45367522	45370252	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	NIC_chr7_+_45367500_45370300
m54284U_201217_021426/99549726/ccs	chr18	+	169	1	Intergenic	novelGene_8950	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGACTACAAT	NA	False	NA	NA	False	NA	NA	NA	46872611	46872780	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr18_+_46872600_46872800
m54284U_201217_021426/99550922/ccs	chr16	+	164	1	Intergenic	novelGene_8110	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAGAGAGATAAA	NA	False	NA	NA	False	NA	NA	NA	17559675	17559839	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr16_+_17559700_17559800
m54284U_201217_021426/9961687/ccs	chr5	-	162	1	Intergenic	novelGene_3079	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	147969091	147968929	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr5_-_147968900_147969100
m54284U_201217_021426/9963859/ccs	chr11	-	173	1	Intergenic	novelGene_5863	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTAAAGAAAAAGAAAACAA	NA	False	NA	NA	False	NA	NA	NA	57928321	57928148	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chr11_-_57928100_57928300
m54284U_201217_021426/99747510/ccs	chrX	-	178	1	Intergenic	novelGene_9582	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCCAAGACTTTTATC	NA	False	NA	NA	False	NA	NA	NA	102288196	102288018	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	Intergenic_chrX_-_102288000_102288200
SIRV10001	SIRV10001	+	9941	1	FSM	SIRV10001A	SIRV10001	9941	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9941	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV10001_+_0_9900
SIRV10002	SIRV10002	+	10001	1	FSM	SIRV10002A	SIRV10002	10001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV10002_+_0_10000
SIRV10003	SIRV10003	+	9970	1	FSM	SIRV10003A	SIRV10003	9970	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9970	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV10003_+_0_10000
SIRV101	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1499	junction_5	1975.53128044078	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
SIRV102	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4191	junction_1	833.052752764727	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
SIRV103	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1304	junction_5	2022.74937646758	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
SIRV105	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1547	junction_4	2187.81237769604	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
SIRV106	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	2	497	junction_2	204	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV1_-_1485_7552_7809_10553
SIRV107	SIRV1	-	744	3	FSM	SIRV1A	SIRV107	744	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11643	10647	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV1_-_10792_10882_11243_11403
SIRV108	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	13	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV1_+_10792_10897_11188_11403
SIRV109	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3494	junction_2	198.5	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV1_+_10792_10882_11058_11434
SIRV12001	SIRV12001	+	12029	1	FSM	SIRV12001A	SIRV12001	12029	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12029	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV12001_+_0_12000
SIRV12002	SIRV12002	+	11999	1	FSM	SIRV12002A	SIRV12002	11999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV12002_+_0_12000
SIRV12003	SIRV12003	+	12000	1	FSM	SIRV12003A	SIRV12003	12000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	12000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV12003_+_0_12000
SIRV201	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_6	997.649657946115	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAACGTGGCATGCG	NA	False	NA	NA	False	NA	NA	NA	5907	1000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
SIRV202	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_6	1003.16519576788	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
SIRV203	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_4	259.923065540556	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
SIRV204	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_1	198	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV2_-_3826_3966_4480_4687
SIRV205	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV2_+_1100_1600
SIRV206	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV2_+_4000_4500
SIRV301	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_3	576.603416569829	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
SIRV302	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_1	0	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_+_2006_6057
SIRV303	SIRV3	+	2018	3	FSM	SIRV3A	SIRV303	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_1	482	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_+_2006_4568_4780_6057
SIRV304	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_6	907.203057620014	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
SIRV305	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1609	junction_2	828.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_+_4081_4568_4780_6570
SIRV306	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_2	1218.5	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_+_2006_4003_4081_6057
SIRV307	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	1252	junction_4	794.143052289699	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1963	8939	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
SIRV308	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	5391	junction_1	17	738	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1982	1000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_-_1168_1532_1765_1902
SIRV309	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1394	junction_2	16	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_-_8976_9189_9299_9434
SIRV310	SIRV3	-	589	3	FSM	SIRV3C	SIRV310	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_2	66	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGGTTTTGGGTACT	NA	False	NA	NA	False	NA	NA	NA	9914	8759	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_-_8967_9189_9325_9667
SIRV311	SIRV3	-	161	1	FSM	SIRV3D	SIRV311	161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4762	4601	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV3_-_4600_4800
SIRV4001	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4001_+_0_4000
SIRV4002	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4593	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4002_+_0_4000
SIRV4003	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1913	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4003_+_0_4000
SIRV403	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3065.46367708958	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
SIRV404	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_3	2787.93595494747	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
SIRV405	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	7498	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4_-_8991_13672
SIRV406	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	2584	junction_1	0	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5158	3637	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4_-_4104_5007
SIRV408	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2658.88059152719	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
SIRV409	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_2	11.5	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4_+_1347_1678_1886_2389
SIRV410	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV4_+_1886_2251
SIRV501	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_14	3064.59256060247	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
SIRV502	SIRV5	+	1984	18	FSM	SIRV5A	SIRV502	1984	18	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_4	3430.92271124242	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
SIRV503	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_2	5146.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_8586_10858_10992_11133
SIRV504	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	870	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_11100_13600
SIRV505	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	5578	junction_10	1970.92572045614	5677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
SIRV506	SIRV5	+	552	2	FSM	SIRV5A	SIRV506	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	11478	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_1150_1987
SIRV507	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	3871	junction_1	2708.37786137754	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
SIRV508	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_10	2773.74385702339	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
SIRV509	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_3	4608.45413946538	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
SIRV510	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_17	2924.81329602575	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
SIRV511	SIRV5	+	546	2	FSM	SIRV5A	SIRV511	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_+_1144_1987
SIRV512	SIRV5	-	229	1	FSM	SIRV5B	SIRV512	229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2406	2177	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV5_-_2200_2400
SIRV6001	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1787	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6001_+_0_6000
SIRV6002	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1486	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6002_+_0_6000
SIRV6003	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	501	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6003_+_0_6000
SIRV601	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	0	0	0	0	multi-exon	TRUE	canonical	3	2056	junction_3	7596.8547757855	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1000	11826	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
SIRV602	SIRV6	+	574	8	FSM	SIRV6A	SIRV602	574	8	0	0	0	0	multi-exon	FALSE	canonical	3	8561	junction_3	5767.41567350754	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
SIRV603	SIRV6	+	1969	1	FSM	SIRV6A	SIRV603	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	208	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8999	10968	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_9000_11000
SIRV604	SIRV6	+	1537	10	FSM	SIRV6A	SIRV604	1537	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	9140.21704229429	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTTAGTTCAATCTT	NA	False	NA	NA	False	NA	NA	NA	1087	11837	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11034_11109_11205
SIRV605	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8239.38325968637	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
SIRV606	SIRV6	+	545	4	FSM	SIRV6A	SIRV606	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	12902	junction_1	3352.72986617705	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724
SIRV607	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10529.1711924538	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
SIRV608	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	18415	junction_1	2118.18355095954	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
SIRV609	SIRV6	+	485	4	FSM	SIRV6A	SIRV609	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	15063	junction_3	5493.41668626083	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1137	2120	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
SIRV610	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	12902	junction_1	2966.72052736688	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
SIRV611	SIRV6	+	454	3	FSM	SIRV6A	SIRV611	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	2656	junction_1	12443	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1303	1950	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_1382_1468_1535_1640
SIRV612	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7772.9807349673	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
SIRV613	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	9686.74001715748	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
SIRV614	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	2976	junction_3	7392.30118095847	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
SIRV615	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	18822	junction_2	2138	1936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_10819_11031_11109_11205
SIRV616	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_2	7304.14215816386	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
SIRV617	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_-_1500_1800
SIRV618	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	2547	2358	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV6_-_2400_2500
SIRV701	SIRV7	-	2462	5	FSM	SIRV7A	SIRV701	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTGTTAATATGAATC	NA	False	NA	NA	False	TATAAA	-19	NA	147923	1003	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
SIRV702	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	1351.00954844886	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
SIRV703	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_2	1651.92015167199	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
SIRV704	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	4944	junction_1	1233	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV7_-_56098_78841_78964_114680
SIRV705	SIRV7	-	2462	5	FSM	SIRV7A	SIRV705	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	1923	junction_2	1231.81783860277	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147925	1005	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
SIRV706	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3147	junction_1	1522.61994601411	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
SIRV708	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1573.00102987887	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
SIRV8001	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2093	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV8001_+_0_8000
SIRV8002	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1989	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV8002_+_0_8000
SIRV8003	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	624	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	ES_cdna_pacbio_ls	iso_detect_ref_brooks_pacbio_ls	FSM_SIRV8003_+_0_8000
